Query 002214
Match_columns 952
No_of_seqs 867 out of 5940
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 17:15:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002214.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002214hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 8.8E-73 3E-77 694.2 38.5 575 5-593 26-752 (768)
2 3rgz_A Protein brassinosteroid 100.0 1.5E-59 5E-64 576.8 36.4 503 35-559 153-744 (768)
3 1ziw_A TOLL-like receptor 3; i 100.0 6.6E-58 2.3E-62 557.5 41.2 526 33-583 25-627 (680)
4 1ziw_A TOLL-like receptor 3; i 100.0 1.6E-57 5.5E-62 554.0 38.0 520 36-576 7-595 (680)
5 3t6q_A CD180 antigen; protein- 100.0 2.6E-56 9E-61 536.0 37.9 497 33-561 33-566 (606)
6 3t6q_A CD180 antigen; protein- 100.0 2.9E-55 1E-59 526.9 35.8 512 37-583 16-565 (606)
7 3vq2_A TLR4, TOLL-like recepto 100.0 6.8E-55 2.3E-59 523.7 34.7 489 33-561 32-564 (606)
8 3j0a_A TOLL-like receptor 5; m 100.0 1.5E-54 5.2E-59 537.8 36.1 520 20-582 13-564 (844)
9 3vq2_A TLR4, TOLL-like recepto 100.0 4.9E-54 1.7E-58 516.2 32.9 507 36-585 14-565 (606)
10 4eco_A Uncharacterized protein 100.0 2.9E-55 9.9E-60 526.1 20.1 476 13-559 59-604 (636)
11 3j0a_A TOLL-like receptor 5; m 100.0 4.7E-53 1.6E-57 524.4 37.3 504 36-579 7-540 (844)
12 4ecn_A Leucine-rich repeat pro 100.0 5.4E-53 1.8E-57 513.2 32.6 481 4-556 282-865 (876)
13 4asz_A BDNF/NT-3 growth factor 100.0 6.9E-53 2.3E-57 451.5 16.3 265 663-950 12-296 (299)
14 4aoj_A High affinity nerve gro 100.0 5.3E-52 1.8E-56 451.0 19.3 258 664-944 41-320 (329)
15 2z63_A TOLL-like receptor 4, v 100.0 1.7E-50 5.7E-55 482.1 33.5 510 34-582 29-560 (570)
16 3omv_A RAF proto-oncogene seri 100.0 2.1E-51 7.1E-56 439.6 20.9 262 662-944 34-301 (307)
17 2z81_A CD282 antigen, TOLL-lik 100.0 2E-50 6.7E-55 479.0 29.5 502 20-561 3-516 (549)
18 4gt4_A Tyrosine-protein kinase 100.0 1.1E-51 3.9E-56 444.0 17.1 255 664-941 26-304 (308)
19 4fih_A Serine/threonine-protei 100.0 2.7E-50 9.2E-55 436.0 19.2 250 664-937 74-324 (346)
20 4b9d_A Serine/threonine-protei 100.0 1.4E-50 4.8E-55 438.9 15.7 251 663-937 23-277 (350)
21 4g3f_A NF-kappa-beta-inducing 100.0 7.1E-50 2.4E-54 431.6 20.2 257 663-946 57-319 (336)
22 4ase_A Vascular endothelial gr 100.0 2.3E-50 8E-55 441.5 16.1 269 654-944 54-348 (353)
23 3hmm_A TGF-beta receptor type- 100.0 2.3E-49 7.8E-54 427.8 20.0 275 664-944 3-298 (303)
24 2z81_A CD282 antigen, TOLL-lik 100.0 1.6E-48 5.5E-53 462.6 29.0 496 56-582 4-514 (549)
25 3fpq_A Serine/threonine-protei 100.0 3.2E-49 1.1E-53 419.6 20.2 246 666-937 28-283 (290)
26 4aw0_A HPDK1, 3-phosphoinositi 100.0 4.8E-50 1.7E-54 427.4 13.0 248 664-936 32-284 (311)
27 4fie_A Serine/threonine-protei 100.0 4.1E-49 1.4E-53 437.3 20.1 250 664-937 151-401 (423)
28 3hyh_A Carbon catabolite-derep 100.0 3.3E-49 1.1E-53 415.6 17.0 246 664-937 13-263 (275)
29 2z63_A TOLL-like receptor 4, v 100.0 1.2E-47 4.2E-52 457.4 31.8 466 33-536 52-536 (570)
30 4eco_A Uncharacterized protein 100.0 3.7E-48 1.3E-52 464.5 20.9 457 57-581 81-603 (636)
31 2z7x_B TOLL-like receptor 1, v 100.0 9.3E-48 3.2E-52 452.5 22.6 463 36-560 3-486 (520)
32 3ubd_A Ribosomal protein S6 ki 100.0 4.4E-49 1.5E-53 420.4 10.0 248 664-937 24-282 (304)
33 4g8a_A TOLL-like receptor 4; l 100.0 1.5E-46 5E-51 454.4 31.3 490 34-560 53-585 (635)
34 4g8a_A TOLL-like receptor 4; l 100.0 1.6E-45 5.6E-50 445.2 34.8 534 22-584 23-586 (635)
35 4g31_A Eukaryotic translation 100.0 3.2E-47 1.1E-51 408.5 17.5 249 664-937 5-280 (299)
36 2z7x_B TOLL-like receptor 1, v 100.0 5.9E-46 2E-50 437.2 27.1 458 60-583 3-486 (520)
37 4ecn_A Leucine-rich repeat pro 100.0 5.8E-46 2E-50 451.5 27.0 463 57-583 323-871 (876)
38 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 5.9E-45 2E-49 432.3 23.4 462 36-560 34-515 (562)
39 4b99_A Mitogen-activated prote 100.0 9.8E-45 3.3E-49 404.2 17.6 269 663-937 53-345 (398)
40 4f9c_A Cell division cycle 7-r 100.0 2E-44 6.8E-49 397.7 19.4 268 661-937 18-353 (361)
41 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 3.4E-43 1.2E-47 417.1 22.6 442 33-535 52-514 (562)
42 3uto_A Twitchin; kinase, muscl 100.0 2.5E-43 8.5E-48 412.9 21.0 253 663-937 156-411 (573)
43 3v5w_A G-protein coupled recep 100.0 1.6E-43 5.3E-48 409.4 17.7 250 663-937 188-450 (689)
44 3s95_A LIMK-1, LIM domain kina 100.0 1.2E-42 4.2E-47 379.9 22.9 265 663-948 9-287 (310)
45 3v47_A TOLL-like receptor 5B a 100.0 4.1E-42 1.4E-46 397.5 26.3 405 17-564 4-417 (455)
46 3uim_A Brassinosteroid insensi 100.0 3.4E-42 1.2E-46 379.4 20.9 283 651-940 17-308 (326)
47 2qkw_B Protein kinase; three-h 100.0 4.4E-42 1.5E-46 377.5 20.2 279 656-944 31-316 (321)
48 3v47_A TOLL-like receptor 5B a 100.0 5.5E-41 1.9E-45 388.0 27.7 383 18-511 14-412 (455)
49 3fxz_A Serine/threonine-protei 100.0 1.5E-41 5E-46 368.3 19.3 251 663-937 19-270 (297)
50 4hcu_A Tyrosine-protein kinase 100.0 1.1E-41 3.8E-46 364.2 17.6 258 663-944 9-267 (269)
51 1jl5_A Outer protein YOPM; leu 100.0 1.1E-40 3.9E-45 381.8 27.1 402 56-560 10-416 (454)
52 2psq_A Fibroblast growth facto 100.0 3.7E-41 1.3E-45 376.5 22.4 261 663-946 80-367 (370)
53 3soc_A Activin receptor type-2 100.0 1.7E-41 5.6E-46 372.6 18.7 274 662-944 22-319 (322)
54 3sxs_A Cytoplasmic tyrosine-pr 100.0 9E-42 3.1E-46 364.8 15.9 258 663-944 7-265 (268)
55 3kul_A Ephrin type-A receptor 100.0 1.9E-41 6.6E-46 372.3 18.3 259 663-944 48-314 (325)
56 3cbl_A C-FES, proto-oncogene t 100.0 9E-42 3.1E-46 383.0 15.1 260 662-944 112-375 (377)
57 3p86_A Serine/threonine-protei 100.0 2.3E-41 7.9E-46 368.6 17.9 265 657-945 30-300 (309)
58 3zgw_A Maternal embryonic leuc 100.0 1.3E-41 4.4E-46 375.0 15.8 251 662-937 8-261 (347)
59 3ugc_A Tyrosine-protein kinase 100.0 6.6E-42 2.2E-46 371.4 12.8 270 663-945 9-293 (295)
60 3gen_A Tyrosine-protein kinase 100.0 3.7E-41 1.3E-45 363.1 18.1 259 662-944 22-281 (283)
61 1jl5_A Outer protein YOPM; leu 100.0 6.3E-40 2.1E-44 375.7 28.3 403 74-579 5-410 (454)
62 3fe3_A MAP/microtubule affinit 100.0 3.3E-41 1.1E-45 369.8 16.7 248 663-937 14-265 (328)
63 4eqm_A Protein kinase; transfe 100.0 6E-41 2E-45 363.1 17.9 261 663-943 10-275 (294)
64 2c30_A Serine/threonine-protei 100.0 1.6E-40 5.5E-45 364.3 21.1 262 652-937 23-295 (321)
65 1mp8_A Focal adhesion kinase 1 100.0 7.1E-41 2.4E-45 360.4 17.5 262 662-947 13-280 (281)
66 2qol_A Ephrin receptor; recept 100.0 4.7E-41 1.6E-45 375.8 16.4 259 663-944 44-310 (373)
67 2nru_A Interleukin-1 receptor- 100.0 1.1E-39 3.7E-44 356.1 25.6 279 651-943 12-306 (307)
68 3niz_A Rhodanese family protei 100.0 2.6E-40 9E-45 361.0 20.6 270 662-937 19-301 (311)
69 3vhe_A Vascular endothelial gr 100.0 7.6E-41 2.6E-45 374.0 16.3 271 653-945 11-357 (359)
70 1csn_A Casein kinase-1; phosph 100.0 3.4E-40 1.1E-44 358.6 20.9 266 663-947 9-287 (298)
71 2izr_A Casein kinase I isoform 100.0 2E-40 6.9E-45 365.6 19.2 264 663-946 8-284 (330)
72 1tki_A Titin; serine kinase, m 100.0 1.5E-40 5.1E-45 364.1 17.9 252 663-937 4-258 (321)
73 3q4u_A Activin receptor type-1 100.0 3.4E-40 1.2E-44 359.1 20.3 264 663-941 7-300 (301)
74 3op5_A Serine/threonine-protei 100.0 1.6E-40 5.4E-45 371.6 17.5 271 662-947 33-333 (364)
75 3t9t_A Tyrosine-protein kinase 100.0 2.9E-40 9.8E-45 352.9 18.8 258 663-944 7-265 (267)
76 1o6l_A RAC-beta serine/threoni 100.0 2.5E-40 8.7E-45 363.7 18.6 249 663-937 4-261 (337)
77 2yab_A Death-associated protei 100.0 3.3E-40 1.1E-44 366.1 19.4 253 662-937 10-273 (361)
78 3lb7_A RAF proto-oncogene seri 100.0 3.2E-40 1.1E-44 359.4 18.2 263 662-945 34-302 (307)
79 1t46_A HOMO sapiens V-KIT hard 100.0 3.5E-40 1.2E-44 361.2 17.8 266 662-949 21-313 (313)
80 3tt0_A Basic fibroblast growth 100.0 6.8E-40 2.3E-44 368.6 20.5 261 662-945 67-354 (382)
81 1qcf_A Haematopoetic cell kina 100.0 1.2E-40 4.2E-45 383.0 14.7 258 661-943 185-444 (454)
82 3h4j_B AMPK kdaid, SNF1-like p 100.0 2.2E-40 7.4E-45 363.8 16.0 247 663-937 8-259 (336)
83 1luf_A Muscle-specific tyrosin 100.0 1.7E-40 5.7E-45 368.8 15.1 266 661-949 44-341 (343)
84 1k9a_A Carboxyl-terminal SRC k 100.0 7.1E-40 2.4E-44 376.0 20.8 253 662-944 191-446 (450)
85 3tki_A Serine/threonine-protei 100.0 2.9E-40 9.8E-45 362.4 16.5 253 663-937 6-262 (323)
86 3l9p_A Anaplastic lymphoma kin 100.0 1.7E-40 5.6E-45 371.1 14.8 260 663-945 70-347 (367)
87 4aw2_A Serine/threonine-protei 100.0 1.3E-40 4.6E-45 377.4 13.9 262 657-937 67-339 (437)
88 1rjb_A FL cytokine receptor; k 100.0 3.9E-40 1.3E-44 365.8 16.9 266 661-948 42-339 (344)
89 2y0a_A Death-associated protei 100.0 9.3E-40 3.2E-44 359.1 19.4 252 663-937 10-272 (326)
90 4dc2_A Protein kinase C IOTA t 100.0 6.4E-40 2.2E-44 366.9 18.4 252 662-931 50-307 (396)
91 3poz_A Epidermal growth factor 100.0 3.8E-40 1.3E-44 362.6 16.3 258 663-944 14-279 (327)
92 2vd5_A DMPK protein; serine/th 100.0 2.5E-40 8.4E-45 372.6 14.8 261 657-937 54-328 (412)
93 3lxp_A Non-receptor tyrosine-p 100.0 9.2E-40 3.2E-44 358.2 18.7 272 666-949 33-316 (318)
94 1opk_A P150, C-ABL, proto-onco 100.0 4.9E-40 1.7E-44 381.6 17.4 256 662-941 218-476 (495)
95 1ob3_A PFPK5, cell division co 100.0 3.7E-40 1.3E-44 356.1 15.0 268 664-937 2-281 (288)
96 2eva_A TAK1 kinase - TAB1 chim 100.0 9.9E-40 3.4E-44 355.9 18.5 256 663-945 7-265 (307)
97 3cc6_A Protein tyrosine kinase 100.0 9.8E-40 3.3E-44 351.5 18.1 260 662-945 10-275 (281)
98 1qpc_A LCK kinase; alpha beta 100.0 6.3E-40 2.1E-44 352.7 16.6 262 661-947 10-273 (279)
99 4f0f_A Serine/threonine-protei 100.0 1.1E-39 3.6E-44 352.5 18.3 253 663-941 18-287 (287)
100 3txo_A PKC-L, NPKC-ETA, protei 100.0 2.5E-40 8.6E-45 366.2 13.6 250 662-937 21-281 (353)
101 2id5_A Lingo-1, leucine rich r 100.0 5.2E-39 1.8E-43 373.5 25.2 347 159-583 15-361 (477)
102 1kob_A Twitchin; kinase, intra 100.0 1.4E-39 4.7E-44 364.4 19.5 253 663-937 50-305 (387)
103 3soa_A Calcium/calmodulin-depe 100.0 1.1E-39 3.7E-44 371.5 18.9 255 661-937 8-268 (444)
104 4euu_A Serine/threonine-protei 100.0 1.8E-39 6.1E-44 356.3 19.9 274 663-941 8-307 (319)
105 3c0i_A Peripheral plasma membr 100.0 1.4E-39 4.7E-44 361.4 19.2 253 663-937 23-287 (351)
106 4e5w_A Tyrosine-protein kinase 100.0 6.9E-40 2.4E-44 356.8 16.4 267 663-942 20-301 (302)
107 3v8s_A RHO-associated protein 100.0 2.4E-40 8.3E-45 372.4 13.1 258 658-937 63-330 (410)
108 3mdy_A Bone morphogenetic prot 100.0 5.4E-39 1.8E-43 355.7 23.8 279 659-945 32-333 (337)
109 2ivs_A Proto-oncogene tyrosine 100.0 1.1E-39 3.7E-44 357.4 17.9 260 662-944 21-312 (314)
110 1u59_A Tyrosine-protein kinase 100.0 3.3E-39 1.1E-43 348.5 21.1 263 663-949 8-278 (287)
111 3kmu_A ILK, integrin-linked ki 100.0 9.2E-40 3.1E-44 349.8 16.5 252 663-943 9-270 (271)
112 3qup_A Tyrosine-protein kinase 100.0 1E-39 3.6E-44 359.0 17.3 261 662-945 21-300 (323)
113 3dtc_A Mitogen-activated prote 100.0 6.5E-40 2.2E-44 351.0 15.2 251 663-941 6-271 (271)
114 3kfa_A Tyrosine-protein kinase 100.0 1.7E-39 5.9E-44 351.1 18.5 261 662-946 11-274 (288)
115 2bdw_A Hypothetical protein K1 100.0 1.1E-39 3.7E-44 363.3 17.3 253 662-937 27-285 (362)
116 4hgt_A Casein kinase I isoform 100.0 2.5E-39 8.7E-44 351.3 19.7 267 661-948 6-285 (296)
117 3lxl_A Tyrosine-protein kinase 100.0 5.7E-40 1.9E-44 361.6 14.8 273 663-945 22-305 (327)
118 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 4.5E-40 1.6E-44 377.8 14.5 257 662-943 182-440 (452)
119 2x4f_A Myosin light chain kina 100.0 2.2E-39 7.5E-44 362.1 19.5 249 667-937 92-343 (373)
120 4fr4_A YANK1, serine/threonine 100.0 1.5E-39 5E-44 362.7 17.9 250 663-936 14-271 (384)
121 3a8x_A Protein kinase C IOTA t 100.0 2E-39 7E-44 358.3 18.9 257 663-937 8-276 (345)
122 1fot_A TPK1 delta, CAMP-depend 100.0 1.6E-39 5.5E-44 354.8 17.7 246 663-937 5-259 (318)
123 3o0g_A Cell division protein k 100.0 1.5E-39 5E-44 352.2 17.2 269 664-937 2-283 (292)
124 2w4o_A Calcium/calmodulin-depe 100.0 1.3E-39 4.3E-44 361.3 16.9 252 662-937 51-306 (349)
125 2w1i_A JAK2; chromosomal rearr 100.0 2.9E-39 9.8E-44 355.7 19.6 271 663-946 40-325 (326)
126 3uzp_A CKI-delta, CKID, casein 100.0 6.2E-39 2.1E-43 348.2 22.0 264 663-947 8-284 (296)
127 2zv2_A Calcium/calmodulin-depe 100.0 2.4E-39 8.1E-44 351.7 18.4 250 663-937 12-293 (298)
128 1xjd_A Protein kinase C, theta 100.0 4.9E-40 1.7E-44 362.4 13.2 251 660-936 13-269 (345)
129 2pvf_A Fibroblast growth facto 100.0 4E-39 1.4E-43 355.9 20.3 262 662-946 33-321 (334)
130 3og7_A AKAP9-BRAF fusion prote 100.0 1.3E-39 4.3E-44 352.1 15.8 260 662-942 22-287 (289)
131 3f66_A Hepatocyte growth facto 100.0 2.6E-39 9E-44 351.5 18.3 261 663-946 24-294 (298)
132 3qd2_B Eukaryotic translation 100.0 1.9E-39 6.6E-44 358.5 17.3 251 662-937 4-326 (332)
133 4fvq_A Tyrosine-protein kinase 100.0 5.1E-40 1.7E-44 355.4 12.1 253 663-944 7-276 (289)
134 2xir_A Vascular endothelial gr 100.0 1.6E-39 5.4E-44 356.5 16.2 270 654-945 17-312 (316)
135 3c1x_A Hepatocyte growth facto 100.0 1E-39 3.4E-44 364.6 14.7 261 664-947 89-359 (373)
136 3kex_A Receptor tyrosine-prote 100.0 1.1E-39 3.6E-44 358.9 14.1 258 663-944 12-277 (325)
137 2wqm_A Serine/threonine-protei 100.0 5.4E-39 1.9E-43 351.1 19.5 268 662-950 30-304 (310)
138 1rdq_E PKA C-alpha, CAMP-depen 100.0 2.2E-39 7.7E-44 358.4 16.6 246 663-937 40-294 (350)
139 2pmi_A Negative RE, cyclin-dep 100.0 5.9E-39 2E-43 351.4 19.5 270 662-937 3-294 (317)
140 3p1a_A MYT1 kinase, membrane-a 100.0 3.1E-39 1.1E-43 352.6 17.3 246 663-937 56-305 (311)
141 1b6c_B TGF-B superfamily recep 100.0 1.3E-38 4.4E-43 353.4 22.4 276 655-945 33-338 (342)
142 3ork_A Serine/threonine protei 100.0 7.5E-40 2.6E-44 357.8 12.3 258 663-941 11-279 (311)
143 3pls_A Macrophage-stimulating 100.0 6.4E-39 2.2E-43 348.4 19.6 261 665-947 22-291 (298)
144 3gni_B Strad alpha; kinase fol 100.0 7.2E-39 2.5E-43 361.7 20.4 272 662-937 23-334 (389)
145 1mqb_A Ephrin type-A receptor 100.0 4.1E-39 1.4E-43 355.2 17.9 259 664-945 44-311 (333)
146 2buj_A Serine/threonine-protei 100.0 4.1E-39 1.4E-43 353.3 17.7 261 662-943 27-306 (317)
147 3a62_A Ribosomal protein S6 ki 100.0 2.9E-39 9.8E-44 355.3 16.4 249 663-937 16-277 (327)
148 2ac3_A MAP kinase-interacting 100.0 4.9E-39 1.7E-43 352.5 18.1 267 663-937 11-296 (316)
149 2i0e_A Protein kinase C-beta I 100.0 2.2E-39 7.4E-44 358.4 15.2 250 662-937 18-277 (353)
150 3brb_A Proto-oncogene tyrosine 100.0 6.5E-39 2.2E-43 350.9 18.8 263 660-945 30-310 (313)
151 2jii_A Serine/threonine-protei 100.0 2.1E-39 7.1E-44 360.8 15.0 266 663-947 41-340 (352)
152 3g2f_A Bone morphogenetic prot 100.0 2.8E-39 9.7E-44 357.7 16.0 274 663-946 12-321 (336)
153 3bz5_A Internalin-J, INLJ; leu 100.0 6.1E-38 2.1E-42 359.5 27.6 363 46-561 31-393 (457)
154 3gxj_A TGF-beta receptor type- 100.0 1.4E-40 4.7E-45 362.6 5.3 267 663-944 2-298 (303)
155 3uc3_A Serine/threonine-protei 100.0 5.6E-39 1.9E-43 357.6 18.3 253 663-937 19-275 (361)
156 3cok_A Serine/threonine-protei 100.0 5.4E-39 1.8E-43 345.2 17.5 250 663-937 10-263 (278)
157 1p4o_A Insulin-like growth fac 100.0 6.2E-40 2.1E-44 360.7 10.3 271 654-947 15-303 (322)
158 3f3z_A Calcium/calmodulin-depe 100.0 1E-38 3.4E-43 342.9 19.4 252 662-937 7-262 (277)
159 2v62_A Serine/threonine-protei 100.0 1.6E-39 5.5E-44 360.5 13.5 264 663-941 36-326 (345)
160 2h34_A Serine/threonine-protei 100.0 1.1E-38 3.9E-43 348.0 20.0 261 662-944 32-297 (309)
161 2y94_A 5'-AMP-activated protei 100.0 4E-39 1.4E-43 369.1 17.1 248 663-937 15-267 (476)
162 3lzb_A Epidermal growth factor 100.0 3.5E-39 1.2E-43 354.6 16.0 258 663-944 14-279 (327)
163 2i1m_A Macrophage colony-stimu 100.0 3.9E-39 1.3E-43 356.0 16.3 266 660-947 42-330 (333)
164 2a2a_A Death-associated protei 100.0 9.2E-39 3.1E-43 350.8 18.9 252 663-937 11-273 (321)
165 3dls_A PAS domain-containing s 100.0 4.1E-39 1.4E-43 355.0 15.8 243 662-937 22-275 (335)
166 2ozo_A Tyrosine-protein kinase 100.0 5.2E-39 1.8E-43 381.6 17.9 260 665-948 336-603 (613)
167 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.7E-38 5.7E-43 355.4 21.0 254 662-946 63-342 (365)
168 1o6v_A Internalin A; bacterial 100.0 2.2E-37 7.5E-42 358.1 31.1 300 154-531 89-388 (466)
169 3g33_A Cell division protein k 100.0 8.1E-39 2.8E-43 349.3 18.0 269 662-937 7-297 (308)
170 3dbq_A Dual specificity protei 100.0 3.1E-39 1.1E-43 357.9 14.8 251 663-937 8-274 (343)
171 3hko_A Calcium/calmodulin-depe 100.0 6.3E-39 2.1E-43 356.3 17.3 260 658-937 20-331 (345)
172 3fdn_A Serine/threonine-protei 100.0 5.3E-39 1.8E-43 345.4 16.1 248 662-937 7-258 (279)
173 1o6v_A Internalin A; bacterial 100.0 2.6E-37 8.8E-42 357.5 31.0 348 54-509 43-390 (466)
174 3oz6_A Mitogen-activated prote 100.0 1E-38 3.6E-43 360.1 18.6 270 661-937 6-329 (388)
175 1u5q_A Serine/threonine protei 100.0 5.7E-39 2E-43 355.4 16.1 246 664-937 54-306 (348)
176 3kn6_A Ribosomal protein S6 ki 100.0 7.1E-39 2.4E-43 351.6 16.8 250 669-937 16-271 (325)
177 2eue_A Carbon catabolite derep 100.0 4.3E-39 1.5E-43 345.3 14.6 246 664-937 13-263 (275)
178 2yex_A Serine/threonine-protei 100.0 1.5E-38 5.1E-43 341.4 18.8 254 662-937 5-262 (276)
179 2h8h_A Proto-oncogene tyrosine 100.0 2.2E-39 7.4E-44 379.6 13.2 258 661-943 264-523 (535)
180 1xbb_A Tyrosine-protein kinase 100.0 9.9E-39 3.4E-43 345.5 17.4 260 662-946 14-282 (291)
181 3kk8_A Calcium/calmodulin depe 100.0 1.1E-38 3.6E-43 344.1 17.4 252 663-937 5-262 (284)
182 3pg1_A Mitogen-activated prote 100.0 1.7E-38 5.7E-43 355.3 19.1 276 655-937 13-317 (362)
183 2zmd_A Dual specificity protei 100.0 7.8E-39 2.7E-43 360.1 16.4 250 664-937 56-321 (390)
184 3i6u_A CDS1, serine/threonine- 100.0 1.5E-38 5E-43 361.6 18.7 254 661-937 132-400 (419)
185 3ttj_A Mitogen-activated prote 100.0 1.4E-38 4.9E-43 365.5 18.7 265 663-937 61-356 (464)
186 1byg_A CSK, protein (C-termina 100.0 6.3E-39 2.2E-43 344.6 14.6 252 663-944 20-274 (278)
187 1fvr_A Tyrosine-protein kinase 100.0 1.6E-38 5.5E-43 350.0 18.2 260 663-947 24-304 (327)
188 4agu_A Cyclin-dependent kinase 100.0 2.6E-38 9E-43 345.8 19.5 269 664-937 3-285 (311)
189 2acx_A G protein-coupled recep 100.0 1.8E-38 6.3E-43 367.7 19.0 253 663-937 183-445 (576)
190 4eut_A Serine/threonine-protei 100.0 8.3E-39 2.8E-43 361.4 15.7 277 663-944 8-310 (396)
191 3bhy_A Death-associated protei 100.0 4.2E-38 1.4E-42 339.2 20.4 258 663-943 4-274 (283)
192 3byv_A Rhoptry kinase; malaria 100.0 5.7E-39 1.9E-43 360.6 14.0 253 663-949 72-374 (377)
193 3mtl_A Cell division protein k 100.0 5.6E-39 1.9E-43 352.8 13.6 268 664-937 2-282 (324)
194 3is5_A Calcium-dependent prote 100.0 1.4E-38 4.9E-43 343.0 16.4 251 663-937 21-279 (285)
195 2id5_A Lingo-1, leucine rich r 100.0 1.8E-37 6.2E-42 360.5 26.7 347 134-560 15-361 (477)
196 3sv0_A Casein kinase I-like; t 100.0 4.5E-38 1.5E-42 361.0 21.1 264 663-945 6-280 (483)
197 4ejn_A RAC-alpha serine/threon 100.0 4.1E-39 1.4E-43 370.0 12.5 250 662-937 146-405 (446)
198 3mi9_A Cell division protein k 100.0 5.8E-38 2E-42 349.2 21.1 271 663-937 16-312 (351)
199 2a19_B Interferon-induced, dou 100.0 1.4E-38 4.9E-43 343.1 15.6 254 661-948 8-279 (284)
200 3llt_A Serine/threonine kinase 100.0 3.2E-38 1.1E-42 352.8 18.7 276 652-937 23-356 (360)
201 2r5t_A Serine/threonine-protei 100.0 7E-39 2.4E-43 356.8 13.2 247 663-935 37-288 (373)
202 2yfx_A Tyrosine-protein kinase 100.0 2.4E-38 8.3E-43 348.6 17.4 260 663-945 29-306 (327)
203 3n9x_A Phosphotransferase; mal 100.0 4E-38 1.4E-42 359.7 19.6 271 662-937 24-362 (432)
204 2j7t_A Serine/threonine-protei 100.0 1.9E-38 6.5E-43 345.4 16.0 253 662-936 17-275 (302)
205 2qr7_A Ribosomal protein S6 ki 100.0 1.8E-38 6.1E-43 350.3 15.9 253 662-937 20-278 (342)
206 1t4h_A Serine/threonine-protei 100.0 7E-38 2.4E-42 338.7 20.2 248 664-937 26-283 (290)
207 2vgo_A Serine/threonine-protei 100.0 2.7E-38 9.4E-43 340.8 16.7 247 663-937 13-263 (284)
208 1vzo_A Ribosomal protein S6 ki 100.0 7.7E-39 2.6E-43 356.0 12.7 255 663-938 53-323 (355)
209 3nsz_A CK II alpha, casein kin 100.0 5.5E-38 1.9E-42 346.4 19.5 263 663-937 35-320 (330)
210 2y7j_A Phosphorylase B kinase 100.0 5.1E-38 1.7E-42 350.6 19.3 257 658-937 88-360 (365)
211 4fl3_A Tyrosine-protein kinase 100.0 2.2E-38 7.5E-43 377.0 17.2 251 670-945 375-633 (635)
212 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.8E-38 6.2E-43 349.6 15.1 271 660-937 30-319 (329)
213 1nxk_A MAP kinase-activated pr 100.0 4.1E-38 1.4E-42 355.3 18.4 252 663-937 60-322 (400)
214 2rku_A Serine/threonine-protei 100.0 2.6E-38 9E-43 342.8 16.1 250 662-937 13-266 (294)
215 3rp9_A Mitogen-activated prote 100.0 4.9E-38 1.7E-42 362.7 19.1 195 663-862 52-281 (458)
216 2jam_A Calcium/calmodulin-depe 100.0 5E-38 1.7E-42 342.3 18.2 252 662-937 7-262 (304)
217 3ll6_A Cyclin G-associated kin 100.0 5.4E-38 1.9E-42 347.6 18.7 256 663-945 27-310 (337)
218 3c4z_A Rhodopsin kinase; Ser/T 100.0 3E-38 1E-42 365.5 17.2 253 663-936 184-448 (543)
219 1ogq_A PGIP-2, polygalacturona 100.0 7.4E-38 2.5E-42 341.4 19.2 276 5-288 20-302 (313)
220 1ua2_A CAK, cell division prot 100.0 1.5E-38 5.3E-43 352.7 13.7 271 661-937 7-292 (346)
221 1cm8_A Phosphorylated MAP kina 100.0 4.2E-38 1.4E-42 351.4 17.1 264 663-937 24-308 (367)
222 2owb_A Serine/threonine-protei 100.0 2.9E-38 9.8E-43 348.9 15.6 249 663-937 40-292 (335)
223 3com_A Serine/threonine-protei 100.0 7.1E-38 2.4E-42 342.9 18.6 253 661-937 26-279 (314)
224 1x8b_A WEE1HU, WEE1-like prote 100.0 3.2E-38 1.1E-42 341.2 15.4 245 662-937 9-280 (289)
225 2clq_A Mitogen-activated prote 100.0 5E-38 1.7E-42 340.9 16.9 251 665-937 23-279 (295)
226 1u46_A ACK-1, activated CDC42 100.0 1.7E-38 5.7E-43 343.9 13.1 259 663-944 17-285 (291)
227 2j0j_A Focal adhesion kinase 1 100.0 4.6E-38 1.6E-42 375.6 18.1 260 662-945 388-653 (656)
228 2h6d_A 5'-AMP-activated protei 100.0 3.8E-38 1.3E-42 338.2 15.6 248 663-937 10-262 (276)
229 3a7i_A MST3 kinase, serine/thr 100.0 4.8E-38 1.6E-42 342.3 16.6 250 663-938 21-272 (303)
230 3q60_A ROP5B; pseudokinase, tr 100.0 2.2E-38 7.7E-43 355.1 14.0 264 663-946 61-364 (371)
231 3fme_A Dual specificity mitoge 100.0 2.7E-38 9.4E-43 342.0 14.1 251 663-937 6-267 (290)
232 3mwu_A Calmodulin-domain prote 100.0 1.7E-37 5.8E-42 360.6 21.3 252 662-937 20-277 (486)
233 2vwi_A Serine/threonine-protei 100.0 1.7E-38 5.9E-43 346.0 12.0 264 660-937 11-288 (303)
234 3lij_A Calcium/calmodulin depe 100.0 2.2E-37 7.6E-42 360.2 22.1 256 663-942 36-299 (494)
235 4aaa_A Cyclin-dependent kinase 100.0 4.9E-38 1.7E-42 346.6 15.7 267 663-937 24-307 (331)
236 3eqc_A Dual specificity mitoge 100.0 4.6E-38 1.6E-42 351.3 15.5 266 663-937 32-325 (360)
237 3eb0_A Putative uncharacterize 100.0 8E-38 2.8E-42 352.0 17.3 273 660-943 3-330 (383)
238 2pml_X PFPK7, Ser/Thr protein 100.0 5.4E-38 1.8E-42 349.3 15.7 267 663-937 30-323 (348)
239 2ycf_A Serine/threonine-protei 100.0 1E-37 3.4E-42 342.9 17.6 253 662-937 8-275 (322)
240 3an0_A Dual specificity mitoge 100.0 4.4E-38 1.5E-42 348.6 14.9 252 662-937 49-311 (340)
241 3q5i_A Protein kinase; CDPK, m 100.0 1.4E-37 4.6E-42 363.0 19.2 252 662-937 34-302 (504)
242 2xrw_A Mitogen-activated prote 100.0 3.1E-37 1.1E-41 345.5 20.8 265 663-937 24-319 (371)
243 3nyv_A Calmodulin-domain prote 100.0 1.1E-37 3.6E-42 362.6 17.6 251 663-937 25-282 (484)
244 2w5a_A Serine/threonine-protei 100.0 2.5E-38 8.4E-43 340.3 11.1 252 663-938 5-269 (279)
245 2fst_X Mitogen-activated prote 100.0 7.6E-38 2.6E-42 348.8 15.3 264 663-937 28-312 (367)
246 3bz5_A Internalin-J, INLJ; leu 100.0 1.2E-36 4.2E-41 348.7 25.6 353 33-538 42-394 (457)
247 3qyz_A Mitogen-activated prote 100.0 2.4E-37 8.2E-42 345.7 19.1 269 662-937 25-314 (364)
248 3lm5_A Serine/threonine-protei 100.0 1.9E-37 6.3E-42 341.2 17.8 256 660-937 24-288 (327)
249 3rgf_A Cyclin-dependent kinase 100.0 1.1E-37 3.8E-42 353.6 16.5 268 664-937 20-334 (405)
250 2x7f_A TRAF2 and NCK-interacti 100.0 5.2E-38 1.8E-42 346.0 12.9 260 654-937 14-287 (326)
251 1wak_A Serine/threonine-protei 100.0 1.6E-37 5.4E-42 352.3 16.9 266 663-937 36-392 (397)
252 2r3i_A Cell division protein k 100.0 1.8E-37 6.1E-42 337.2 16.6 268 664-937 3-284 (299)
253 1phk_A Phosphorylase kinase; g 100.0 4.7E-37 1.6E-41 333.7 19.9 253 661-936 14-283 (298)
254 3kvw_A DYRK2, dual specificity 100.0 1.9E-37 6.5E-42 353.3 17.3 265 663-937 96-409 (429)
255 3pfq_A PKC-B, PKC-beta, protei 100.0 1.3E-37 4.3E-42 373.0 16.4 250 661-936 338-597 (674)
256 2i6l_A Mitogen-activated prote 100.0 3.7E-37 1.3E-41 338.2 18.5 267 663-937 10-306 (320)
257 4exu_A Mitogen-activated prote 100.0 3.5E-37 1.2E-41 345.0 17.4 263 663-937 41-324 (371)
258 4e7w_A Glycogen synthase kinas 100.0 2.8E-37 9.6E-42 348.2 16.4 265 663-937 39-322 (394)
259 2wtk_C Serine/threonine-protei 100.0 3.5E-37 1.2E-41 335.9 16.5 251 662-937 3-264 (305)
260 1zy4_A Serine/threonine-protei 100.0 2.4E-37 8.2E-42 336.9 14.9 253 662-937 4-284 (303)
261 1blx_A Cyclin-dependent kinase 100.0 4.3E-37 1.5E-41 338.6 16.8 269 662-937 9-297 (326)
262 2y4i_B KSR2, HKSR2, kinase sup 100.0 8.4E-38 2.9E-42 343.2 10.0 260 661-945 30-304 (319)
263 2b9h_A MAP kinase FUS3, mitoge 100.0 7.7E-37 2.6E-41 340.6 17.8 267 663-937 10-306 (353)
264 3aln_A Dual specificity mitoge 100.0 4.8E-37 1.6E-41 338.3 15.6 254 663-937 21-286 (327)
265 3e3p_A Protein kinase, putativ 100.0 1.6E-36 5.4E-41 339.1 20.0 275 657-937 16-315 (360)
266 3cek_A Dual specificity protei 100.0 3.7E-37 1.3E-41 336.9 14.5 253 661-937 25-293 (313)
267 3oja_B Anopheles plasmodium-re 100.0 4.8E-36 1.6E-40 357.5 25.2 136 442-583 250-385 (597)
268 3o6n_A APL1; leucine-rich repe 100.0 5E-36 1.7E-40 338.7 24.0 337 154-584 44-380 (390)
269 1j1b_A Glycogen synthase kinas 100.0 9.2E-37 3.1E-41 346.8 17.7 264 663-937 53-337 (420)
270 2wei_A Calmodulin-domain prote 100.0 1.3E-36 4.3E-41 328.3 17.8 253 661-937 19-277 (287)
271 1z57_A Dual specificity protei 100.0 2.6E-36 8.9E-41 334.4 19.3 265 663-937 13-329 (339)
272 3coi_A Mitogen-activated prote 100.0 1.1E-36 3.7E-41 339.1 16.0 263 663-937 23-306 (353)
273 3a99_A Proto-oncogene serine/t 100.0 4.7E-37 1.6E-41 336.8 11.4 244 660-937 39-294 (320)
274 3o6n_A APL1; leucine-rich repe 100.0 1.7E-35 6E-40 334.2 24.5 347 12-483 4-352 (390)
275 2vx3_A Dual specificity tyrosi 100.0 6.4E-36 2.2E-40 336.3 20.8 199 662-867 52-260 (382)
276 3fhr_A MAP kinase-activated pr 100.0 1.6E-36 5.3E-41 334.8 15.3 253 662-937 26-288 (336)
277 2dyl_A Dual specificity mitoge 100.0 1.2E-36 4.2E-41 333.8 14.0 252 663-937 24-284 (318)
278 1q8y_A SR protein kinase; tran 100.0 1.6E-36 5.5E-41 340.9 15.3 266 663-937 18-334 (373)
279 2rio_A Serine/threonine-protei 100.0 1.6E-36 5.4E-41 346.4 14.4 251 664-937 15-296 (434)
280 2iwi_A Serine/threonine-protei 100.0 8.8E-37 3E-41 333.9 11.7 245 659-937 26-284 (312)
281 3p23_A Serine/threonine-protei 100.0 1.8E-36 6.1E-41 344.7 14.4 250 663-937 23-284 (432)
282 2eu9_A Dual specificity protei 100.0 9.5E-36 3.3E-40 332.1 19.1 265 663-937 18-334 (355)
283 3qa8_A MGC80376 protein; kinas 100.0 2E-36 6.8E-41 353.6 12.2 264 663-935 13-296 (676)
284 4fmz_A Internalin; leucine ric 100.0 5E-34 1.7E-38 317.0 26.8 194 348-555 153-346 (347)
285 3dzo_A Rhoptry kinase domain; 100.0 2.2E-35 7.4E-40 334.8 14.0 251 663-947 77-376 (413)
286 3uqc_A Probable conserved tran 100.0 1.3E-34 4.3E-39 311.3 18.6 233 663-944 30-266 (286)
287 4fmz_A Internalin; leucine ric 100.0 1.3E-33 4.6E-38 313.6 27.4 305 153-531 42-346 (347)
288 2pzi_A Probable serine/threoni 100.0 5.5E-35 1.9E-39 353.1 17.5 243 663-945 79-330 (681)
289 3m2w_A MAP kinase-activated pr 100.0 2.5E-34 8.6E-39 312.1 18.6 231 663-937 16-257 (299)
290 1ogq_A PGIP-2, polygalacturona 100.0 4E-34 1.4E-38 311.9 18.5 236 346-583 72-309 (313)
291 2vuw_A Serine/threonine-protei 100.0 9.1E-35 3.1E-39 321.2 9.7 244 663-937 19-332 (336)
292 3oja_B Anopheles plasmodium-re 100.0 5.9E-33 2E-37 330.8 25.3 314 178-583 50-363 (597)
293 2ft3_A Biglycan; proteoglycan, 100.0 4E-32 1.4E-36 299.4 24.8 288 180-553 34-331 (332)
294 1xku_A Decorin; proteoglycan, 100.0 1.2E-31 3.9E-36 295.5 26.7 290 179-553 31-330 (330)
295 2ft3_A Biglycan; proteoglycan, 100.0 8.7E-32 3E-36 296.7 25.3 301 145-529 18-331 (332)
296 1xku_A Decorin; proteoglycan, 100.0 1.9E-31 6.3E-36 293.9 26.6 291 154-529 30-330 (330)
297 1z7x_W Ribonuclease inhibitor; 100.0 8.1E-35 2.8E-39 336.9 -7.1 398 57-538 3-447 (461)
298 4fcg_A Uncharacterized protein 100.0 1.1E-31 3.7E-36 294.3 15.4 264 3-291 40-315 (328)
299 1z7x_W Ribonuclease inhibitor; 100.0 3.9E-34 1.3E-38 331.2 -6.4 363 155-533 3-413 (461)
300 3ogk_B Coronatine-insensitive 100.0 1E-32 3.5E-37 330.0 -6.6 451 20-552 40-548 (592)
301 2z80_A TOLL-like receptor 2, v 100.0 8.7E-30 3E-34 283.2 16.6 190 347-560 121-319 (353)
302 2z80_A TOLL-like receptor 2, v 100.0 7.5E-30 2.6E-34 283.8 15.8 213 13-265 22-236 (353)
303 1ozn_A Reticulon 4 receptor; N 100.0 1.3E-29 4.5E-34 272.8 14.8 236 348-583 30-266 (285)
304 2z66_A Variable lymphocyte rec 100.0 2.4E-29 8.2E-34 273.9 15.6 183 348-531 76-261 (306)
305 2z66_A Variable lymphocyte rec 100.0 5.8E-29 2E-33 270.8 18.3 194 347-540 98-296 (306)
306 3zyi_A Leucine-rich repeat-con 100.0 1.8E-28 6.2E-33 282.1 22.8 213 346-560 95-308 (452)
307 3zyj_A Leucine-rich repeat-con 100.0 1.9E-28 6.6E-33 280.9 22.8 213 346-560 84-297 (440)
308 3g06_A SSPH2 (leucine-rich rep 100.0 2.3E-28 7.8E-33 287.9 16.7 289 13-446 14-308 (622)
309 1ozn_A Reticulon 4 receptor; N 100.0 1.2E-27 4.1E-32 257.4 20.6 253 254-561 14-267 (285)
310 3zyi_A Leucine-rich repeat-con 100.0 9.3E-28 3.2E-32 276.2 20.5 234 349-584 74-309 (452)
311 3zyj_A Leucine-rich repeat-con 100.0 1E-27 3.4E-32 274.9 20.5 234 349-584 63-298 (440)
312 3ogk_B Coronatine-insensitive 100.0 3.7E-30 1.3E-34 307.8 -0.5 350 157-557 140-528 (592)
313 3o53_A Protein LRIM1, AGAP0063 99.9 1.5E-28 5.2E-33 268.5 9.0 267 181-560 12-281 (317)
314 3g06_A SSPH2 (leucine-rich rep 99.9 2.2E-26 7.6E-31 271.0 28.1 167 351-542 142-308 (622)
315 4fcg_A Uncharacterized protein 99.9 6.3E-27 2.2E-31 256.4 21.1 205 347-555 101-314 (328)
316 3o53_A Protein LRIM1, AGAP0063 99.9 9.4E-29 3.2E-33 270.2 5.9 125 156-292 11-135 (317)
317 3oja_A Leucine-rich immune mol 99.9 4.8E-28 1.6E-32 280.0 11.2 222 348-582 32-254 (487)
318 2o6q_A Variable lymphocyte rec 99.9 6.7E-27 2.3E-31 249.2 19.0 217 18-264 2-218 (270)
319 1wwl_A Monocyte differentiatio 99.9 1.1E-28 3.9E-33 268.8 5.1 249 13-292 23-289 (312)
320 1wwl_A Monocyte differentiatio 99.9 5.2E-28 1.8E-32 263.7 8.0 85 467-556 225-310 (312)
321 2p1m_B Transport inhibitor res 99.9 3.8E-30 1.3E-34 308.0 -10.7 450 20-554 34-543 (594)
322 4azs_A Methyltransferase WBDD; 99.9 2.2E-28 7.5E-33 286.5 4.2 185 672-865 242-438 (569)
323 2z62_A TOLL-like receptor 4, v 99.9 3.4E-26 1.2E-30 244.9 17.7 212 350-562 28-244 (276)
324 2o6q_A Variable lymphocyte rec 99.9 1E-25 3.6E-30 240.0 21.4 208 350-560 16-223 (270)
325 3oja_A Leucine-rich immune mol 99.9 1.9E-26 6.3E-31 266.6 15.1 170 351-551 100-271 (487)
326 1p9a_G Platelet glycoprotein I 99.9 4.2E-25 1.4E-29 237.3 18.6 207 346-559 6-212 (290)
327 2z62_A TOLL-like receptor 4, v 99.9 6.2E-25 2.1E-29 235.0 18.3 225 354-582 11-241 (276)
328 2p1m_B Transport inhibitor res 99.9 2.1E-28 7.3E-33 292.7 -9.6 422 33-530 66-543 (594)
329 1p9a_G Platelet glycoprotein I 99.9 1.9E-24 6.5E-29 232.1 18.4 209 369-583 5-213 (290)
330 3rfs_A Internalin B, repeat mo 99.9 3.2E-24 1.1E-28 228.6 17.3 205 346-561 37-241 (272)
331 3en9_A Glycoprotease, O-sialog 99.9 2.1E-25 7.2E-30 259.8 8.5 185 667-866 339-539 (540)
332 4glp_A Monocyte differentiatio 99.9 6.4E-24 2.2E-28 231.1 17.8 203 348-556 89-308 (310)
333 3rfs_A Internalin B, repeat mo 99.9 2.1E-24 7.1E-29 230.1 13.0 186 349-543 62-247 (272)
334 3m19_A Variable lymphocyte rec 99.9 6.6E-23 2.3E-27 215.7 20.4 181 350-533 14-194 (251)
335 2xwt_C Thyrotropin receptor; s 99.9 1.5E-23 5.2E-28 218.9 14.0 196 351-552 32-236 (239)
336 3m19_A Variable lymphocyte rec 99.9 6E-23 2.1E-27 216.0 18.1 184 374-560 14-197 (251)
337 1h6u_A Internalin H; cell adhe 99.9 9.1E-23 3.1E-27 221.3 16.5 196 346-557 37-232 (308)
338 2xwt_C Thyrotropin receptor; s 99.9 2.5E-22 8.7E-27 209.6 16.8 203 48-287 25-236 (239)
339 2ca6_A RAN GTPase-activating p 99.9 8.4E-25 2.9E-29 246.2 -2.5 203 347-549 91-337 (386)
340 2ast_B S-phase kinase-associat 99.9 1.4E-24 4.9E-29 239.5 -2.4 268 19-299 35-315 (336)
341 3goz_A Leucine-rich repeat-con 99.9 1.3E-23 4.6E-28 233.9 5.1 170 350-539 109-305 (362)
342 3goz_A Leucine-rich repeat-con 99.9 1.2E-23 4E-28 234.4 4.0 105 160-264 3-122 (362)
343 1zar_A RIO2 kinase; serine kin 99.9 1.8E-22 6.2E-27 215.2 11.3 150 659-838 85-252 (282)
344 4glp_A Monocyte differentiatio 99.9 4.4E-22 1.5E-26 216.5 13.1 181 347-532 114-308 (310)
345 1h6u_A Internalin H; cell adhe 99.9 1.4E-21 4.6E-26 212.1 16.2 173 347-533 60-232 (308)
346 2ca6_A RAN GTPase-activating p 99.9 5.6E-24 1.9E-28 239.4 -3.0 214 346-559 56-320 (386)
347 4ay9_X Follicle-stimulating ho 99.9 2.6E-21 8.7E-26 214.2 18.0 128 355-483 85-215 (350)
348 2ast_B S-phase kinase-associat 99.9 5.5E-23 1.9E-27 226.8 3.8 208 349-560 92-311 (336)
349 4ay9_X Follicle-stimulating ho 99.9 8.9E-22 3E-26 217.9 13.4 227 350-581 30-261 (350)
350 2v70_A SLIT-2, SLIT homolog 2 99.8 1.3E-21 4.3E-26 201.0 10.0 156 402-560 15-171 (220)
351 2v9t_B SLIT homolog 2 protein 99.8 1.5E-21 5.2E-26 200.4 10.3 138 422-559 32-169 (220)
352 3cvr_A Invasion plasmid antige 99.8 1.3E-21 4.3E-26 227.5 9.9 204 13-248 35-251 (571)
353 2o6s_A Variable lymphocyte rec 99.8 1.1E-20 3.9E-25 192.5 14.3 174 353-560 10-183 (208)
354 2xot_A Amphoterin-induced prot 99.8 7.8E-21 2.7E-25 211.2 13.6 180 353-559 21-206 (361)
355 2o6s_A Variable lymphocyte rec 99.8 2E-20 6.9E-25 190.6 14.5 165 348-519 26-190 (208)
356 3cvr_A Invasion plasmid antige 99.8 9.7E-20 3.3E-24 211.7 17.0 182 351-560 60-248 (571)
357 3e6j_A Variable lymphocyte rec 99.8 1.2E-19 4.3E-24 187.4 14.8 137 422-559 40-176 (229)
358 1h6t_A Internalin B; cell adhe 99.8 1.3E-19 4.3E-24 194.7 14.9 172 371-556 43-214 (291)
359 1h6t_A Internalin B; cell adhe 99.8 1.1E-19 3.7E-24 195.3 13.7 181 346-540 42-222 (291)
360 2xot_A Amphoterin-induced prot 99.8 1.1E-19 3.9E-24 201.8 13.4 180 314-531 20-202 (361)
361 2v9t_B SLIT homolog 2 protein 99.8 3.2E-19 1.1E-23 183.0 15.6 153 353-532 14-166 (220)
362 3e6j_A Variable lymphocyte rec 99.8 3.7E-19 1.3E-23 183.9 15.3 163 14-218 12-174 (229)
363 2v70_A SLIT-2, SLIT homolog 2 99.8 4.5E-19 1.5E-23 181.9 15.1 133 401-533 35-168 (220)
364 1m9s_A Internalin B; cell inva 99.8 2.1E-19 7E-24 211.5 12.1 172 371-556 40-211 (605)
365 1m9s_A Internalin B; cell inva 99.8 5.2E-19 1.8E-23 208.1 15.1 188 346-547 39-226 (605)
366 1dce_A Protein (RAB geranylger 99.8 3E-21 1E-25 225.9 -4.1 207 53-284 345-567 (567)
367 1w8a_A SLIT protein; signaling 99.8 5E-19 1.7E-23 177.4 8.9 129 401-532 11-140 (192)
368 1dce_A Protein (RAB geranylger 99.8 1.1E-20 3.9E-25 220.9 -4.3 204 309-549 346-567 (567)
369 1xeu_A Internalin C; cellular 99.8 5.7E-19 2E-23 186.5 8.6 170 349-557 18-187 (263)
370 1zth_A RIO1 serine protein kin 99.8 3.9E-19 1.3E-23 187.2 6.8 137 665-814 48-219 (258)
371 1xeu_A Internalin C; cellular 99.7 4.2E-18 1.4E-22 179.8 12.1 152 346-510 37-188 (263)
372 4ezg_A Putative uncharacterize 99.7 5.6E-18 1.9E-22 170.7 12.5 153 371-531 41-194 (197)
373 1w8a_A SLIT protein; signaling 99.7 1.3E-17 4.3E-22 167.2 14.8 155 425-582 11-166 (192)
374 4ezg_A Putative uncharacterize 99.7 7.7E-18 2.6E-22 169.7 12.9 155 346-508 40-195 (197)
375 3sb4_A Hypothetical leucine ri 99.7 4.9E-18 1.7E-22 186.1 10.9 200 346-548 120-327 (329)
376 3sb4_A Hypothetical leucine ri 99.7 2.4E-18 8.2E-23 188.6 7.7 123 154-286 24-157 (329)
377 2wfh_A SLIT homolog 2 protein 99.7 5.1E-18 1.8E-22 169.9 9.4 132 425-560 13-144 (193)
378 4b8c_D Glucose-repressible alc 99.7 3.4E-18 1.2E-22 206.5 6.5 213 9-261 150-369 (727)
379 4b8c_D Glucose-repressible alc 99.7 1.6E-18 5.6E-23 209.3 3.3 138 346-487 220-358 (727)
380 4fdw_A Leucine rich hypothetic 99.7 1.4E-15 4.6E-20 170.1 20.4 178 351-554 204-382 (401)
381 2o6r_A Variable lymphocyte rec 99.7 2.8E-16 9.5E-21 155.3 11.6 132 425-559 10-141 (177)
382 2ell_A Acidic leucine-rich nuc 99.7 2.8E-16 9.5E-21 153.9 11.3 112 418-531 45-160 (168)
383 4fdw_A Leucine rich hypothetic 99.7 2.2E-15 7.4E-20 168.5 20.0 196 352-556 159-359 (401)
384 4gyi_A RIO2 kinase; protein ki 99.6 5.9E-17 2E-21 176.1 6.2 139 665-815 96-266 (397)
385 2ell_A Acidic leucine-rich nuc 99.6 3.2E-16 1.1E-20 153.4 11.0 135 420-556 22-161 (168)
386 2je0_A Acidic leucine-rich nuc 99.6 4.1E-16 1.4E-20 149.2 9.1 127 422-550 17-148 (149)
387 2je0_A Acidic leucine-rich nuc 99.6 5.3E-16 1.8E-20 148.5 9.6 128 398-527 17-149 (149)
388 4fs7_A Uncharacterized protein 99.6 1.7E-14 6E-19 162.0 22.6 332 145-546 61-392 (394)
389 4fs7_A Uncharacterized protein 99.6 7.8E-15 2.7E-19 164.9 19.6 318 167-552 59-376 (394)
390 2wfh_A SLIT homolog 2 protein 99.6 2.3E-15 7.9E-20 150.6 12.8 127 402-532 14-140 (193)
391 2o6r_A Variable lymphocyte rec 99.6 3.1E-15 1.1E-19 147.8 13.1 132 401-535 10-141 (177)
392 1a9n_A U2A', U2A'; complex (nu 99.6 2.7E-15 9.3E-20 147.9 8.0 130 420-555 17-153 (176)
393 1ds9_A Outer arm dynein; leuci 99.6 9.1E-17 3.1E-21 161.9 -4.2 162 370-556 14-186 (198)
394 1a9n_A U2A', U2A'; complex (nu 99.5 8E-15 2.7E-19 144.5 8.7 105 423-531 43-153 (176)
395 3g39_A Variable lymphocyte rec 99.5 1.2E-14 4.2E-19 142.1 9.3 90 470-559 30-119 (170)
396 1ds9_A Outer arm dynein; leuci 99.5 3E-16 1E-20 158.2 -3.3 155 347-532 15-186 (198)
397 2r9u_A Variable lymphocyte rec 99.5 3.6E-14 1.2E-18 139.1 9.5 89 470-558 33-121 (174)
398 3g39_A Variable lymphocyte rec 99.4 3.8E-13 1.3E-17 131.4 12.6 107 424-533 11-117 (170)
399 2r9u_A Variable lymphocyte rec 99.4 4.4E-13 1.5E-17 131.4 11.4 105 425-532 15-119 (174)
400 4gt6_A Cell surface protein; l 99.4 1.2E-11 3.9E-16 138.9 24.5 167 34-235 23-190 (394)
401 4gt6_A Cell surface protein; l 99.4 1.1E-11 3.8E-16 139.1 23.5 134 413-553 256-389 (394)
402 2ifg_A High affinity nerve gro 99.3 3.3E-12 1.1E-16 140.9 11.6 132 426-560 12-146 (347)
403 3un9_A NLR family member X1; l 99.3 2.8E-14 9.7E-19 157.9 -5.6 172 349-540 71-261 (372)
404 2ifg_A High affinity nerve gro 99.3 1.1E-12 3.6E-17 144.9 7.0 131 449-583 11-146 (347)
405 3un9_A NLR family member X1; l 99.3 5.5E-14 1.9E-18 155.5 -5.9 192 311-531 71-283 (372)
406 3tm0_A Aminoglycoside 3'-phosp 99.2 2E-11 6.7E-16 128.9 10.8 147 659-812 9-212 (263)
407 4h09_A Hypothetical leucine ri 99.1 1.3E-09 4.6E-14 121.5 20.0 146 391-541 210-355 (379)
408 4h09_A Hypothetical leucine ri 99.1 3.4E-09 1.2E-13 118.2 22.8 311 155-518 46-356 (379)
409 1nd4_A Aminoglycoside 3'-phosp 99.1 1E-10 3.5E-15 123.2 9.4 137 664-812 20-213 (264)
410 3dxp_A Putative acyl-COA dehyd 98.9 3.3E-09 1.1E-13 117.2 10.2 142 668-813 42-248 (359)
411 2ra8_A Uncharacterized protein 98.9 7.6E-10 2.6E-14 121.1 4.5 159 370-531 135-320 (362)
412 2ra8_A Uncharacterized protein 98.8 1.9E-09 6.4E-14 118.0 5.9 161 393-556 134-321 (362)
413 3sg8_A APH(2'')-ID; antibiotic 98.8 2E-09 7E-14 115.9 6.1 186 669-865 25-287 (304)
414 3rw6_A Nuclear RNA export fact 98.7 2.7E-10 9.1E-15 118.0 -4.8 98 19-118 76-183 (267)
415 3r70_A Aminoglycoside phosphot 98.5 4.2E-07 1.4E-11 98.3 12.0 137 665-814 38-238 (320)
416 1io0_A Tropomodulin; LRR prote 98.4 1.6E-08 5.4E-13 99.8 -1.0 44 173-216 115-164 (185)
417 3rw6_A Nuclear RNA export fact 98.4 3.5E-08 1.2E-12 102.1 1.4 80 467-548 167-257 (267)
418 3d1u_A Putative fructosamine-3 98.4 1.4E-06 4.7E-11 92.3 12.9 77 667-747 18-97 (288)
419 4gkh_A Aminoglycoside 3'-phosp 98.4 1.6E-06 5.5E-11 91.3 12.4 135 671-813 31-223 (272)
420 3tdw_A Gentamicin resistance p 98.4 2.2E-06 7.6E-11 91.9 13.4 136 669-813 24-224 (306)
421 1io0_A Tropomodulin; LRR prote 98.4 7.6E-08 2.6E-12 94.9 1.3 114 418-531 32-164 (185)
422 3ovc_A Hygromycin-B 4-O-kinase 98.2 4.4E-06 1.5E-10 91.7 11.7 143 666-814 43-244 (362)
423 3ats_A Putative uncharacterize 98.2 2.8E-06 9.7E-11 93.5 8.5 81 669-749 25-122 (357)
424 2olc_A MTR kinase, methylthior 98.0 3.2E-05 1.1E-09 86.3 12.7 75 669-745 35-120 (397)
425 3e4g_A ATP synthase subunit S, 97.9 5.1E-06 1.8E-10 79.4 4.4 82 180-261 62-149 (176)
426 3e4g_A ATP synthase subunit S, 97.9 6.6E-06 2.2E-10 78.7 3.5 85 155-239 61-151 (176)
427 2q83_A YTAA protein; 2635576, 97.8 7.9E-05 2.7E-09 81.2 12.6 138 670-812 38-251 (346)
428 2pyw_A Uncharacterized protein 97.8 3.4E-05 1.2E-09 86.7 8.4 81 781-862 230-313 (420)
429 3jr1_A Putative fructosamine-3 97.8 0.00014 4.7E-09 77.5 12.2 137 668-809 40-232 (312)
430 3f7w_A Putative fructosamine-3 97.7 0.00015 5.2E-09 76.7 11.2 79 665-747 16-97 (288)
431 3rfe_A Platelet glycoprotein I 97.3 0.0002 6.7E-09 65.3 5.5 60 498-559 12-72 (130)
432 2ppq_A HSK, HK, homoserine kin 97.3 0.0005 1.7E-08 74.0 9.6 156 654-812 7-216 (322)
433 1pgv_A TMD-1, tropomodulin TMD 97.2 0.0001 3.5E-09 71.8 2.1 38 81-118 41-83 (197)
434 1pgv_A TMD-1, tropomodulin TMD 97.2 8.2E-05 2.8E-09 72.5 1.4 64 154-217 40-112 (197)
435 1zyl_A Hypothetical protein YI 97.2 0.0022 7.4E-08 69.2 12.9 158 652-813 9-223 (328)
436 2yle_A Protein spire homolog 1 97.2 0.0014 4.9E-08 63.9 9.8 103 745-864 33-135 (229)
437 3csv_A Aminoglycoside phosphot 97.1 0.0024 8.3E-08 69.0 12.5 139 670-813 24-217 (333)
438 3feg_A Choline/ethanolamine ki 97.0 0.0018 6.2E-08 70.8 9.9 140 669-813 55-254 (379)
439 3dxq_A Choline/ethanolamine ki 97.0 0.00071 2.4E-08 72.1 6.0 136 669-813 23-202 (301)
440 1nw1_A Choline kinase (49.2 KD 96.9 0.0015 5.1E-08 73.2 8.8 73 669-747 78-159 (429)
441 2qg7_A Ethanolamine kinase PV0 96.8 0.0043 1.5E-07 69.7 11.0 74 669-747 113-188 (458)
442 3rfe_A Platelet glycoprotein I 96.8 0.0017 5.8E-08 59.1 6.2 56 474-531 12-68 (130)
443 3c5i_A Choline kinase; choline 96.6 0.0031 1.1E-07 69.2 7.9 74 669-747 38-121 (369)
444 3i1a_A Spectinomycin phosphotr 96.5 0.0068 2.3E-07 65.5 9.8 67 674-747 33-108 (339)
445 3f2s_A CK, chetk-alpha, cholin 96.0 0.018 6.2E-07 63.1 9.8 139 670-812 58-279 (401)
446 3mes_A Choline kinase; malaria 95.5 0.024 8.2E-07 62.8 8.2 74 669-747 75-157 (424)
447 3g15_A CK, chetk-alpha, cholin 92.3 0.29 1E-05 53.9 8.7 30 784-813 245-280 (401)
448 3cxl_A N-chimerin; SH2, RHO-GA 74.7 0.4 1.4E-05 53.8 -1.5 61 667-730 145-214 (463)
449 4ann_A ESSB; membrane protein, 60.7 17 0.00059 35.3 6.9 121 718-872 43-164 (215)
450 4ano_A ESSB; membrane protein, 57.7 44 0.0015 32.5 9.3 116 718-867 48-164 (219)
451 2lz0_A Uncharacterized protein 52.8 31 0.0011 28.9 6.5 48 359-407 5-52 (100)
452 2lz0_A Uncharacterized protein 51.1 26 0.00087 29.4 5.7 45 191-236 8-52 (100)
453 2x6h_A GH13170P, VPS34, phosph 43.7 3.2E+02 0.011 31.7 15.0 44 762-812 530-575 (696)
454 3ls8_A Phosphatidylinositol 3- 38.4 4.4E+02 0.015 29.9 14.9 46 760-812 454-501 (614)
455 3pk1_B Apoptosis regulator BAX 30.8 38 0.0013 21.6 2.5 24 928-951 6-29 (34)
456 1cja_A Protein (actin-fragmin 29.4 1.1E+02 0.0038 31.8 7.3 139 666-813 71-237 (342)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=8.8e-73 Score=694.20 Aligned_cols=575 Identities=33% Similarity=0.500 Sum_probs=431.0
Q ss_pred CCCCccccccCCCCCCCCCceEEEeCCCCeEEEEEecCCCCccc---CC-----------------------ccccCCcc
Q 002214 5 NPNNILAQNWTSNASVCSWMGITCDVYGNRVTSLTISDLGLAGT---IP-----------------------SHLGNLSS 58 (952)
Q Consensus 5 ~~~~~~~~~~~~~~~~c~w~~v~c~~~~~~~~~l~l~~~~~~~~---~p-----------------------~~l~~l~~ 58 (952)
||. .++ +|..++|||.|.||+|+ .++|++|+++++++.|. +| +.++.+++
T Consensus 26 ~~~-~l~-~W~~~~~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~~~~~~~~~l~~~~~~l~~ 101 (768)
T 3rgz_A 26 DKN-LLP-DWSSNKNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHINGSVSGFKCSAS 101 (768)
T ss_dssp CTT-SST-TCCTTSCGGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEECTTSCEEECCCCCCCCTT
T ss_pred Ccc-ccc-CCCCCCCCcCCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCcccccCCcCCCcCCCchhhccCCC
Confidence 787 666 88777899999999999 57999999999999886 55 46667777
Q ss_pred cCeeeccccccccccCC--CcCCcCCCcEEeCcCCcccccCChhh-cCCCCCCeEeecCccCccccCcc---cccccccc
Q 002214 59 LQTLVLSRNWFSGTIPK--EIGNLTKLKELHLDYNKLQGEIPEEL-GNLAELEMLVLNNNLLTGTIPAS---IFNLSFIS 132 (952)
Q Consensus 59 L~~L~L~~n~l~~~~p~--~l~~l~~L~~L~L~~n~l~~~~p~~l-~~l~~L~~L~L~~n~l~~~~p~~---~~~l~~l~ 132 (952)
|++|+|++|.+++.+|. .++.+++|++|+|++|.+.+..|..+ .++++|++|+|++|.+++..|.. +.++..+
T Consensus 102 L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L- 180 (768)
T 3rgz_A 102 LTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGEL- 180 (768)
T ss_dssp CCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHHTTCCTTC-
T ss_pred CCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChhhhhhccCCCC-
Confidence 77777777777777776 77777777777777777776666554 66777777777777776555544 3333332
Q ss_pred cceeeccccccccCCCCCCCCCCccceEEcccCcccccCCccccCCCCCcEEEccCCcccccCCccccc-----------
Q 002214 133 TALDFSDNSLTGSFPYDMCPGLPRLKGLYVSYNQFKGPIPNNLWHCKELSSVSLSYNQFTGRLPRDLGN----------- 201 (952)
Q Consensus 133 ~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~----------- 201 (952)
+.|++++|.+++..|. ..+++|++|+|++|++++.+|. +..+++|++|+|++|++++.+|..|+.
T Consensus 181 ~~L~Ls~n~l~~~~~~---~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~ 256 (768)
T 3rgz_A 181 KHLAISGNKISGDVDV---SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISS 256 (768)
T ss_dssp CEEECCSSEEESCCBC---TTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCS
T ss_pred CEEECCCCcccccCCc---ccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCC
Confidence 4444444444433332 2344444444444444443333 444444444444444444444444444
Q ss_pred -----------cCCccEEEeeCCcCCccCchhhhcc-CCCcEeeeccccccccCCccccCCCCccEEEeeCccccccCCC
Q 002214 202 -----------STKLKSLDLGFNNLNGEIPQEIGNL-RNLEILGIDQSNLVGFVPDTIFNISTLKILSLFNNTLSGNLPS 269 (952)
Q Consensus 202 -----------l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 269 (952)
+++|++|+|++|++++.+|..+..+ ++|+.|+|++|++.+..|..+.++++|++|++++|.+.+.+|.
T Consensus 257 n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~ 336 (768)
T 3rgz_A 257 NQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPM 336 (768)
T ss_dssp SCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCH
T ss_pred CcccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCH
Confidence 4444555555555544556555554 7777777777777777777777777777777777777655442
Q ss_pred CcccCCCCCcceEEcccCcCCCCCCcccccch-hhhhhhcccc---------------CccccccccCcceee-chhhHH
Q 002214 270 SKNLIGLPNLEGLNLGLNNLSGSIPSFFFNAS-KLYALELGYN---------------SNLKRLGLERNYLTF-STSELM 332 (952)
Q Consensus 270 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~-~L~~l~l~~~---------------~~L~~L~L~~n~l~~-~~~~~~ 332 (952)
..+..+++|++|++++|++++.+|..+..++ +|+.|+++.| .+|+.|++++|.++. .+..+.
T Consensus 337 -~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~ 415 (768)
T 3rgz_A 337 -DTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLS 415 (768)
T ss_dssp -HHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGG
T ss_pred -HHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHh
Confidence 1256677788888888887777777777776 7777777654 357777777777763 232211
Q ss_pred HHHHHhhc----------cccccccCCCcccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCccccCCCcceE
Q 002214 333 SLFSALVN----------CKSLKIGNLINLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYV 402 (952)
Q Consensus 333 ~~~~~~~~----------~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~ 402 (952)
. ...+.. .....++.+++|+.|++++|.+++.+|..+..+++|++|++++|++++..|..|..+++|++
T Consensus 416 ~-l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 494 (768)
T 3rgz_A 416 N-CSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNW 494 (768)
T ss_dssp G-CTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCE
T ss_pred c-CCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCE
Confidence 1 111111 11123567788999999999998888888999999999999999998888999999999999
Q ss_pred EEeccccccccCCCccCCCCCCcEEeccccccCCcCCccccCCCCCceeEecCCccCCCCchhhh---------------
Q 002214 403 VYLNRNKLSGSIPSCLGDLNSLRILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIE--------------- 467 (952)
Q Consensus 403 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~--------------- 467 (952)
|+|++|++++.+|..++.+++|++|++++|++++.+|..+..+++|+.|++++|++++.+|..+.
T Consensus 495 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~ 574 (768)
T 3rgz_A 495 ISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKR 574 (768)
T ss_dssp EECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCE
T ss_pred EEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccc
Confidence 99999999989999999999999999999999989999999999999999999999877775442
Q ss_pred -------------------------------------------------------cccccceeecCCcccCCCCcccccC
Q 002214 468 -------------------------------------------------------NLKAVVDIYLSRNNLSGNIPSTIIG 492 (952)
Q Consensus 468 -------------------------------------------------------~l~~L~~L~Ls~N~l~~~~~~~~~~ 492 (952)
.+++|+.|+|++|++++.+|..|+.
T Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~ 654 (768)
T 3rgz_A 575 YVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGS 654 (768)
T ss_dssp EEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGG
T ss_pred ccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhc
Confidence 3467889999999999999999999
Q ss_pred CCCCceEEccCccccCcccccccccccccEEeCCCCcccccCccchhcccccccccccccccccCCCCCCCccccccccc
Q 002214 493 LKNLQHLSLEHNKLQGPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFNKLVGEIPRGGAFANFSAESF 572 (952)
Q Consensus 493 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~ 572 (952)
+++|+.|+|++|+++|.+|..|+.+++|+.|||++|++++.+|..+..+++|+.|++++|+++|.+|..++|.++...+|
T Consensus 655 l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~ 734 (768)
T 3rgz_A 655 MPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKF 734 (768)
T ss_dssp CTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGG
T ss_pred cccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCccCCCCCccCCCCCCCCC
Q 002214 573 IGNDLLCGSPYLHVPLCKSSP 593 (952)
Q Consensus 573 ~~n~~~c~~p~~~lp~c~~~~ 593 (952)
.|||++||.|. +.|....
T Consensus 735 ~gN~~Lcg~~l---~~C~~~~ 752 (768)
T 3rgz_A 735 LNNPGLCGYPL---PRCDPSN 752 (768)
T ss_dssp CSCTEEESTTS---CCCCSCC
T ss_pred cCCchhcCCCC---cCCCCCc
Confidence 99999999984 4686543
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.5e-59 Score=576.81 Aligned_cols=503 Identities=31% Similarity=0.465 Sum_probs=412.9
Q ss_pred EEEEEecCCCCcccCCcc---ccCCcccCeeeccccccccccCCCcCCcCCCcEEeCcCCcccccCChhhcCCCCCCeEe
Q 002214 35 VTSLTISDLGLAGTIPSH---LGNLSSLQTLVLSRNWFSGTIPKEIGNLTKLKELHLDYNKLQGEIPEELGNLAELEMLV 111 (952)
Q Consensus 35 ~~~l~l~~~~~~~~~p~~---l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ 111 (952)
+++|+++++.+++..|.. +.++++|++|++++|.+++.+| +..+++|++|+|++|++.+.+|. ++++++|++|+
T Consensus 153 L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~ 229 (768)
T 3rgz_A 153 LEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLD 229 (768)
T ss_dssp CSEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCB--CTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEE
T ss_pred CCEEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCC--cccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEE
Confidence 344444444444443333 4444555555555555544333 26677777777777777766666 88888888888
Q ss_pred ecCccCccccCcccccccccccceeeccccccccCCCCCCCCCCccceEEcccCcccccCCccccCC-CCCcEEEccCCc
Q 002214 112 LNNNLLTGTIPASIFNLSFISTALDFSDNSLTGSFPYDMCPGLPRLKGLYVSYNQFKGPIPNNLWHC-KELSSVSLSYNQ 190 (952)
Q Consensus 112 L~~n~l~~~~p~~~~~l~~l~~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l-~~L~~L~L~~N~ 190 (952)
|++|.+++.+|..+.+++.+ +.|++++|++++.+|.. .+++|++|+|++|++++.+|..+... ++|++|+|++|+
T Consensus 230 Ls~n~l~~~~~~~l~~l~~L-~~L~Ls~n~l~~~~~~~---~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~ 305 (768)
T 3rgz_A 230 ISGNKLSGDFSRAISTCTEL-KLLNISSNQFVGPIPPL---PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNH 305 (768)
T ss_dssp CCSSCCCSCHHHHTTTCSSC-CEEECCSSCCEESCCCC---CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSE
T ss_pred CcCCcCCCcccHHHhcCCCC-CEEECCCCcccCccCcc---ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCc
Confidence 88888887788888777765 78888888888777764 67788888888888888888888765 888888888888
Q ss_pred ccccCCccccccCCccEEEeeCCcCCccCchh-hhccCCCcEeeeccccccccCCccccCCC-CccEEEeeCccccccCC
Q 002214 191 FTGRLPRDLGNSTKLKSLDLGFNNLNGEIPQE-IGNLRNLEILGIDQSNLVGFVPDTIFNIS-TLKILSLFNNTLSGNLP 268 (952)
Q Consensus 191 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~n~~~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~ 268 (952)
+++.+|..|+++++|++|+|++|++++.+|.. |..+++|+.|++++|++.+.+|..+.+++ +|++|++++|++++.++
T Consensus 306 l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~ 385 (768)
T 3rgz_A 306 FYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPIL 385 (768)
T ss_dssp EEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECC
T ss_pred CCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcC
Confidence 88888888888888889999888888677765 88888888999888888888888888887 88888888888887766
Q ss_pred CCcccCCCCCcceEEcccCcCCCCCCcccccchhhhhhhcccc-------------CccccccccCcceeechhhHHHHH
Q 002214 269 SSKNLIGLPNLEGLNLGLNNLSGSIPSFFFNASKLYALELGYN-------------SNLKRLGLERNYLTFSTSELMSLF 335 (952)
Q Consensus 269 ~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l~l~~~-------------~~L~~L~L~~n~l~~~~~~~~~~~ 335 (952)
.......+++|++|++++|++++.+|..|..+++|+.|++++| ++|+.|++++|.+......
T Consensus 386 ~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~----- 460 (768)
T 3rgz_A 386 PNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQ----- 460 (768)
T ss_dssp TTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCG-----
T ss_pred hhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCH-----
Confidence 6544334778888899888888888888888888888887766 4678888888887632221
Q ss_pred HHhhccccccccCCCcccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCC
Q 002214 336 SALVNCKSLKIGNLINLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIP 415 (952)
Q Consensus 336 ~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 415 (952)
.++.+++|++|++++|++++.+|..+..+++|++|+|++|++++..|.+|..+++|++|+|++|++++.+|
T Consensus 461 ---------~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 531 (768)
T 3rgz_A 461 ---------ELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIP 531 (768)
T ss_dssp ---------GGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECC
T ss_pred ---------HHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCC
Confidence 36778999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCCcEEeccccccCCcCCcc------------------------------------------------------
Q 002214 416 SCLGDLNSLRILSLSSNELTSVIPST------------------------------------------------------ 441 (952)
Q Consensus 416 ~~~~~l~~L~~L~L~~N~l~~~~~~~------------------------------------------------------ 441 (952)
..+..+++|+.|++++|++++.+|..
T Consensus 532 ~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 611 (768)
T 3rgz_A 532 AELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRN 611 (768)
T ss_dssp GGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTC
T ss_pred HHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhcccccc
Confidence 99999999999999999998766643
Q ss_pred ----------------ccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEccCcc
Q 002214 442 ----------------FWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNK 505 (952)
Q Consensus 442 ----------------~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 505 (952)
|..+++|+.|||++|++++.+|..++.++.|+.|+|++|++++.+|..|+.+++|+.|||++|+
T Consensus 612 ~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~ 691 (768)
T 3rgz_A 612 PCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNK 691 (768)
T ss_dssp CSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSC
T ss_pred ccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCc
Confidence 3345789999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccccccccccccEEeCCCCcccccCccchhcccccccccccccccccCCC
Q 002214 506 LQGPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFNKLVGEIP 559 (952)
Q Consensus 506 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 559 (952)
++|.+|..+..+++|++|||++|+|+|.+|.. ..+..+....+.+|+.-|-.|
T Consensus 692 l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~-~~~~~~~~~~~~gN~~Lcg~~ 744 (768)
T 3rgz_A 692 LDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM-GQFETFPPAKFLNNPGLCGYP 744 (768)
T ss_dssp CEECCCGGGGGCCCCSEEECCSSEEEEECCSS-SSGGGSCGGGGCSCTEEESTT
T ss_pred ccCcCChHHhCCCCCCEEECcCCcccccCCCc-hhhccCCHHHhcCCchhcCCC
Confidence 99999999999999999999999999999964 456677778889998666544
No 3
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=6.6e-58 Score=557.46 Aligned_cols=526 Identities=23% Similarity=0.242 Sum_probs=351.0
Q ss_pred CeEEEEEecCCCCcccCCccccCCcccCeeeccccccccccCCCcCCcCCCcEEeCcCCcccccCChhhcCCCCCCeEee
Q 002214 33 NRVTSLTISDLGLAGTIPSHLGNLSSLQTLVLSRNWFSGTIPKEIGNLTKLKELHLDYNKLQGEIPEELGNLAELEMLVL 112 (952)
Q Consensus 33 ~~~~~l~l~~~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 112 (952)
.+++.|+++++.+++..|..++++++|++|+|++|.+++..|..++.+++|++|+|++|++.+..+.+|+++++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 57899999999999777778999999999999999999888888999999999999999998555557999999999999
Q ss_pred cCccCccccCcccccccccccceeeccccccccCCCCCCCCCCccceEEcccCcccccCCcccc--CCCCCcEEEccCCc
Q 002214 113 NNNLLTGTIPASIFNLSFISTALDFSDNSLTGSFPYDMCPGLPRLKGLYVSYNQFKGPIPNNLW--HCKELSSVSLSYNQ 190 (952)
Q Consensus 113 ~~n~l~~~~p~~~~~l~~l~~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~--~l~~L~~L~L~~N~ 190 (952)
++|++++..|..+.++..+ +.|++++|.+++..| ..+..+++|++|++++|++++..+..+. .+++|+.|++++|+
T Consensus 105 ~~n~l~~~~~~~~~~l~~L-~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~ 182 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQKNL-ITLDLSHNGLSSTKL-GTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQ 182 (680)
T ss_dssp CSSCCCCCCSCTTTTCTTC-CEEECCSSCCSCCCC-CSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCC
T ss_pred CCCccCccChhHccccCCC-CEEECCCCcccccCc-hhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCc
Confidence 9999986666778888776 899999999986544 4456788999999999998876665544 45788888888888
Q ss_pred ccccCCccccccC---------------------------CccEEEeeCCcCCccCchhhhccCC--CcEeeeccccccc
Q 002214 191 FTGRLPRDLGNST---------------------------KLKSLDLGFNNLNGEIPQEIGNLRN--LEILGIDQSNLVG 241 (952)
Q Consensus 191 l~~~~~~~~~~l~---------------------------~L~~L~L~~N~l~~~~p~~~~~l~~--L~~L~L~~n~~~~ 241 (952)
+++..|..|..++ +|++|++++|.+++..|..|..++. |+.|++++|++.+
T Consensus 183 l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~ 262 (680)
T 1ziw_A 183 IKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNV 262 (680)
T ss_dssp CCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCE
T ss_pred ccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCc
Confidence 8877777665543 3445555555555555555555543 5555555555555
Q ss_pred cCCccccCCCCccEEEeeCccccccCCCC-------------------------------cccCCCCCcceEEcccCcCC
Q 002214 242 FVPDTIFNISTLKILSLFNNTLSGNLPSS-------------------------------KNLIGLPNLEGLNLGLNNLS 290 (952)
Q Consensus 242 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~-------------------------------~~l~~l~~L~~L~L~~N~l~ 290 (952)
..+..+..+++|++|++++|.+.+..+.. ..+..+++|++|++++|++.
T Consensus 263 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~ 342 (680)
T 1ziw_A 263 VGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIP 342 (680)
T ss_dssp ECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBC
T ss_pred cCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccC
Confidence 55555555555555555555555443321 01233334444444444444
Q ss_pred CCCCcccccchhhhhhhccccCccccccccCcceeechhhHHHHHHHhhccccccccC--CCcccEEEccCCCCCCCCCc
Q 002214 291 GSIPSFFFNASKLYALELGYNSNLKRLGLERNYLTFSTSELMSLFSALVNCKSLKIGN--LINLTTLSLGDNNLSGSLPI 368 (952)
Q Consensus 291 ~~~~~~~~~~~~L~~l~l~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~~~~~~--l~~L~~L~L~~n~l~~~~~~ 368 (952)
+..+..|..+++|+.++++ +|.+... .+....+.. .++|+.|++++|+++++.|.
T Consensus 343 ~~~~~~~~~l~~L~~L~Ls-----------~n~~~~~------------~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~ 399 (680)
T 1ziw_A 343 GIKSNMFTGLINLKYLSLS-----------NSFTSLR------------TLTNETFVSLAHSPLHILNLTKNKISKIESD 399 (680)
T ss_dssp CCCTTTTTTCTTCCEEECT-----------TCBSCCC------------EECTTTTGGGTTSCCCEEECTTSCCCEECTT
T ss_pred CCChhHhccccCCcEEECC-----------CCchhhh------------hcchhhhcccccCcCceEECCCCCCCeEChh
Confidence 4433333333333333333 3221100 000001111 24677777777777766677
Q ss_pred ccccCCCCcEEEccCccccCCCC-ccccCCCcceEEEeccccccccCCCccCCCCCCcEEeccccccC--CcCCccccCC
Q 002214 369 TLGRLKKLQGLDLQNNKFEGPIP-QEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLRILSLSSNELT--SVIPSTFWNL 445 (952)
Q Consensus 369 ~l~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~l 445 (952)
+|..+++|++|++++|.+.+..| ..|.++++|+.|++++|++.+..+..|..+++|+.|++++|.++ +..|..|..+
T Consensus 400 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l 479 (680)
T 1ziw_A 400 AFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPL 479 (680)
T ss_dssp TTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTC
T ss_pred hhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccC
Confidence 77777777777777777764333 56677777777777777777666667777777777777777765 3456667777
Q ss_pred CCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCc--------ccccCCCCCceEEccCccccCccccccccc
Q 002214 446 EDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIP--------STIIGLKNLQHLSLEHNKLQGPIPESFGEL 517 (952)
Q Consensus 446 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--------~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 517 (952)
++|+.|++++|++++..+..|.++++|++|+|++|++++..+ ..|.++++|+.|+|++|+++.+.+..|.++
T Consensus 480 ~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l 559 (680)
T 1ziw_A 480 RNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDL 559 (680)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred CCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccc
Confidence 777777777777776666667777777777777777764321 235667777777777777775444567777
Q ss_pred ccccEEeCCCCcccccCccchhcccccccccccccccccCCCCCC--CcccccccccccCccCCCCCc
Q 002214 518 VSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFNKLVGEIPRGG--AFANFSAESFIGNDLLCGSPY 583 (952)
Q Consensus 518 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~--~~~~~~~~~~~~n~~~c~~p~ 583 (952)
++|+.|+|++|+|++.++..|..+++|+.|++++|++++..|... .+.++....+.+|||.|+|+.
T Consensus 560 ~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 560 FELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred cCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 777777777777776666666777777777777777776554321 345566666677777777763
No 4
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.6e-57 Score=554.02 Aligned_cols=520 Identities=22% Similarity=0.236 Sum_probs=448.1
Q ss_pred EEEEecCCCCcccCCccccCCcccCeeeccccccccccCCCcCCcCCCcEEeCcCCcccccCChhhcCCCCCCeEeecCc
Q 002214 36 TSLTISDLGLAGTIPSHLGNLSSLQTLVLSRNWFSGTIPKEIGNLTKLKELHLDYNKLQGEIPEELGNLAELEMLVLNNN 115 (952)
Q Consensus 36 ~~l~l~~~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n 115 (952)
+.+|.++++++ .+|..+. +++++|+|++|.+++..+..|..+++|++|+|++|.+.+..|.+|+++++|++|+|++|
T Consensus 7 ~~~~cs~~~L~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 83 (680)
T 1ziw_A 7 EVADCSHLKLT-QVPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHN 83 (680)
T ss_dssp SEEECCSSCCS-SCCSCSC--TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSS
T ss_pred CeeECCCCCcc-ccccccC--CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCC
Confidence 35778888887 6887775 79999999999999777778999999999999999999888999999999999999999
Q ss_pred cCccccCcccccccccccceeeccccccccCCCCCCCCCCccceEEcccCcccccCCccccCCCCCcEEEccCCcccccC
Q 002214 116 LLTGTIPASIFNLSFISTALDFSDNSLTGSFPYDMCPGLPRLKGLYVSYNQFKGPIPNNLWHCKELSSVSLSYNQFTGRL 195 (952)
Q Consensus 116 ~l~~~~p~~~~~l~~l~~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 195 (952)
.+++..+..+.++..+ ++|++++|+++ .++...+.++++|++|+|++|++++..|..+..+++|++|++++|.+++..
T Consensus 84 ~l~~l~~~~~~~l~~L-~~L~L~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 161 (680)
T 1ziw_A 84 ELSQLSDKTFAFCTNL-TELHLMSNSIQ-KIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALK 161 (680)
T ss_dssp CCCCCCTTTTTTCTTC-SEEECCSSCCC-CCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBC
T ss_pred ccCccChhhhccCCCC-CEEECCCCccC-ccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccC
Confidence 9994444468888766 99999999998 566677789999999999999999888999999999999999999999877
Q ss_pred Ccccc--ccCCccEEEeeCCcCCccCchhhhcc---------------------------CCCcEeeeccccccccCCcc
Q 002214 196 PRDLG--NSTKLKSLDLGFNNLNGEIPQEIGNL---------------------------RNLEILGIDQSNLVGFVPDT 246 (952)
Q Consensus 196 ~~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l---------------------------~~L~~L~L~~n~~~~~~~~~ 246 (952)
+..++ .+++|++|++++|.+++..|..|..+ ++|+.|++++|++.+..|..
T Consensus 162 ~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~ 241 (680)
T 1ziw_A 162 SEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTT 241 (680)
T ss_dssp HHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTT
T ss_pred HHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhH
Confidence 77665 45899999999999998888877765 45778888888888888999
Q ss_pred ccCCCC--ccEEEeeCccccccCCCCcccCCCCCcceEEcccCcCCCCCCcccccchhhhhhhccc--------------
Q 002214 247 IFNIST--LKILSLFNNTLSGNLPSSKNLIGLPNLEGLNLGLNNLSGSIPSFFFNASKLYALELGY-------------- 310 (952)
Q Consensus 247 ~~~l~~--L~~L~Ls~N~l~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l~l~~-------------- 310 (952)
+..++. |+.|++++|++++..+. .+..+++|++|++++|++.+..|..|.++++|+.++++.
T Consensus 242 ~~~l~~~~L~~L~Ls~n~l~~~~~~--~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~ 319 (680)
T 1ziw_A 242 FLGLKWTNLTMLDLSYNNLNVVGND--SFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPK 319 (680)
T ss_dssp TGGGGGSCCCEEECTTSCCCEECTT--TTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCE
T ss_pred hhccCcCCCCEEECCCCCcCccCcc--cccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccc
Confidence 988765 99999999999877554 378899999999999999999999999999998887753
Q ss_pred --------cCccccccccCcceeechhhHHHHHHHhhccccccccCCCcccEEEccCCCCC--CCCCcccccC--CCCcE
Q 002214 311 --------NSNLKRLGLERNYLTFSTSELMSLFSALVNCKSLKIGNLINLTTLSLGDNNLS--GSLPITLGRL--KKLQG 378 (952)
Q Consensus 311 --------~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~--~~~~~~l~~l--~~L~~ 378 (952)
+++|+.|++++|.++..+.. .+.++++|++|++++|.+. ......|..+ ++|+.
T Consensus 320 i~~~~~~~l~~L~~L~l~~n~l~~~~~~--------------~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~ 385 (680)
T 1ziw_A 320 IDDFSFQWLKCLEHLNMEDNDIPGIKSN--------------MFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHI 385 (680)
T ss_dssp ECTTTTTTCTTCCEEECCSCCBCCCCTT--------------TTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCE
T ss_pred cChhhcccCCCCCEEECCCCccCCCChh--------------HhccccCCcEEECCCCchhhhhcchhhhcccccCcCce
Confidence 46788888888887755433 3677888999999888754 2333444443 58999
Q ss_pred EEccCccccCCCCccccCCCcceEEEeccccccccCC-CccCCCCCCcEEeccccccCCcCCccccCCCCCceeEecCCc
Q 002214 379 LDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIP-SCLGDLNSLRILSLSSNELTSVIPSTFWNLEDILGFDFSSNS 457 (952)
Q Consensus 379 L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 457 (952)
|++++|+++++.|..|..+++|+.|+|++|++++.+| ..|.++++|++|++++|++++..+..|..+++|+.|++++|.
T Consensus 386 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~ 465 (680)
T 1ziw_A 386 LNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVA 465 (680)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSC
T ss_pred EECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhcccc
Confidence 9999999999999999999999999999999987665 689999999999999999999999999999999999999999
Q ss_pred cC--CCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEccCccccCccc--------ccccccccccEEeCCC
Q 002214 458 LN--GSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNKLQGPIP--------ESFGELVSLEFLDLSN 527 (952)
Q Consensus 458 l~--~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~--------~~~~~l~~L~~L~Ls~ 527 (952)
++ +..|..|..+++|+.|+|++|+++++.+..|.++++|++|+|++|++++..+ ..|..+++|+.|+|++
T Consensus 466 l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~ 545 (680)
T 1ziw_A 466 LKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLES 545 (680)
T ss_dssp CBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCS
T ss_pred ccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCC
Confidence 87 5688999999999999999999999888899999999999999999986432 2478999999999999
Q ss_pred CcccccCccchhcccccccccccccccccCCCCC-CCcccccccccccCc
Q 002214 528 NDLSGVIPASLEKLLYLKSLNLSFNKLVGEIPRG-GAFANFSAESFIGND 576 (952)
Q Consensus 528 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~~~~~~~~~~n~ 576 (952)
|+|+.+.+..|.++++|+.|+|++|++++..+.. ..+..+....+.+|.
T Consensus 546 N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~ 595 (680)
T 1ziw_A 546 NGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNL 595 (680)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred CCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCc
Confidence 9999766678999999999999999999655542 345666666677774
No 5
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=2.6e-56 Score=535.98 Aligned_cols=497 Identities=22% Similarity=0.214 Sum_probs=413.6
Q ss_pred CeEEEEEecCCCCcccCCccccCCcccCeeeccccccccccCCCcCCcCCCcEEeCcCCcccccCChhhcCCCCCCeEee
Q 002214 33 NRVTSLTISDLGLAGTIPSHLGNLSSLQTLVLSRNWFSGTIPKEIGNLTKLKELHLDYNKLQGEIPEELGNLAELEMLVL 112 (952)
Q Consensus 33 ~~~~~l~l~~~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 112 (952)
..+++|+++++.+++..|..|+++++|++|+|++|.+++..|+.|.++++|++|+|++|++.+..|.+|+++++|++|+|
T Consensus 33 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 112 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFF 112 (606)
T ss_dssp TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEEC
T ss_pred CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeec
Confidence 57899999999999888889999999999999999999888889999999999999999999888899999999999999
Q ss_pred cCccCccccCcccccccccccceeeccccccccCCCCCCCCCCccceEEcccCcccccCCccccCCCCCc--EEEccCCc
Q 002214 113 NNNLLTGTIPASIFNLSFISTALDFSDNSLTGSFPYDMCPGLPRLKGLYVSYNQFKGPIPNNLWHCKELS--SVSLSYNQ 190 (952)
Q Consensus 113 ~~n~l~~~~p~~~~~l~~l~~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~--~L~L~~N~ 190 (952)
++|++++..|..+.++..+ +.|++++|++++.-+..+ .++++|++|++++|++++..|..|..+++|+ .|++++|+
T Consensus 113 ~~n~i~~l~~~~~~~l~~L-~~L~L~~n~l~~~~~~~~-~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~ 190 (606)
T 3t6q_A 113 IQTGISSIDFIPLHNQKTL-ESLYLGSNHISSIKLPKG-FPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGND 190 (606)
T ss_dssp TTSCCSCGGGSCCTTCTTC-CEEECCSSCCCCCCCCTT-CCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCC
T ss_pred cccCcccCCcchhccCCcc-cEEECCCCcccccCcccc-cCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCc
Confidence 9999996667778777775 899999999985222222 3489999999999999987788889999998 89999999
Q ss_pred ccccCCccccccCCccEEEeeCCcCC--------------------------ccCchhhhccC--CCcEeeecccccccc
Q 002214 191 FTGRLPRDLGNSTKLKSLDLGFNNLN--------------------------GEIPQEIGNLR--NLEILGIDQSNLVGF 242 (952)
Q Consensus 191 l~~~~~~~~~~l~~L~~L~L~~N~l~--------------------------~~~p~~~~~l~--~L~~L~L~~n~~~~~ 242 (952)
+++..|..|.. .+|++|++++|... ...+..|..+. +|+.|++++|++.++
T Consensus 191 l~~~~~~~~~~-~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~ 269 (606)
T 3t6q_A 191 IAGIEPGAFDS-AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNI 269 (606)
T ss_dssp CCEECTTTTTT-CEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSC
T ss_pred cCccChhHhhh-ccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCcc
Confidence 99887777654 67889998887511 11223333333 788999999999988
Q ss_pred CCccccCCCCccEEEeeCccccccCCCCcccCCCCCcceEEcccCcCCCCCCcccccchhhhhhhccccCccccccccCc
Q 002214 243 VPDTIFNISTLKILSLFNNTLSGNLPSSKNLIGLPNLEGLNLGLNNLSGSIPSFFFNASKLYALELGYNSNLKRLGLERN 322 (952)
Q Consensus 243 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l~l~~~~~L~~L~L~~n 322 (952)
.+..|..+++|++|++++|+++ .+|.. +..+++|++|++++|++.+..|..+..+++|+.|+++ +|
T Consensus 270 ~~~~~~~l~~L~~L~l~~n~l~-~lp~~--l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~-----------~n 335 (606)
T 3t6q_A 270 SSNTFHCFSGLQELDLTATHLS-ELPSG--LVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIK-----------GN 335 (606)
T ss_dssp CTTTTTTCTTCSEEECTTSCCS-CCCSS--CCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECC-----------SC
T ss_pred CHHHhccccCCCEEeccCCccC-CCChh--hcccccCCEEECccCCcCcCchhhhhccCcCCEEECC-----------CC
Confidence 8888999999999999999988 44543 6788899999999999988777777666555555444 44
Q ss_pred cee-echhhHHHHHHHhhccccccccCCCcccEEEccCCCCCCCC--CcccccCCCCcEEEccCccccCCCCccccCCCc
Q 002214 323 YLT-FSTSELMSLFSALVNCKSLKIGNLINLTTLSLGDNNLSGSL--PITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSR 399 (952)
Q Consensus 323 ~l~-~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~--~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~ 399 (952)
.+. ..+ ...++.+++|++|++++|.+++.. +..+..+++|++|++++|.+.+..|..|..+++
T Consensus 336 ~~~~~~~--------------~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 401 (606)
T 3t6q_A 336 TKRLELG--------------TGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQ 401 (606)
T ss_dssp SSCCBCC--------------SSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTT
T ss_pred Ccccccc--------------hhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCcc
Confidence 332 111 123678889999999999998665 778889999999999999998888899999999
Q ss_pred ceEEEeccccccccCCC-ccCCCCCCcEEeccccccCCcCCccccCCCCCceeEecCCccCCC---Cchhhhccccccee
Q 002214 400 LYVVYLNRNKLSGSIPS-CLGDLNSLRILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGS---LPLEIENLKAVVDI 475 (952)
Q Consensus 400 L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~---~~~~~~~l~~L~~L 475 (952)
|+.|++++|++.+..+. .+..+++|++|++++|++++..+..|..+++|+.|++++|++++. .+..+..+++|+.|
T Consensus 402 L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L 481 (606)
T 3t6q_A 402 LELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEIL 481 (606)
T ss_dssp CSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEE
T ss_pred CCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEE
Confidence 99999999999876654 488899999999999999988888999999999999999998762 33678889999999
Q ss_pred ecCCcccCCCCcccccCCCCCceEEccCccccCcccccccccccccEEeCCCCcccccCccchhcccccccccccccccc
Q 002214 476 YLSRNNLSGNIPSTIIGLKNLQHLSLEHNKLQGPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFNKLV 555 (952)
Q Consensus 476 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 555 (952)
+|++|++++..|..|..+++|+.|+|++|++++..|..|..+++| .|+|++|++++.+|..+..+++|+.|++++|+|.
T Consensus 482 ~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 560 (606)
T 3t6q_A 482 VLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLD 560 (606)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEE
T ss_pred ECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCcc
Confidence 999999998888999999999999999999998888999999999 9999999999888888999999999999999999
Q ss_pred cCCCCC
Q 002214 556 GEIPRG 561 (952)
Q Consensus 556 ~~~p~~ 561 (952)
|.++..
T Consensus 561 c~c~~~ 566 (606)
T 3t6q_A 561 CTCSNI 566 (606)
T ss_dssp CSGGGH
T ss_pred ccCCcH
Confidence 988753
No 6
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=2.9e-55 Score=526.89 Aligned_cols=512 Identities=21% Similarity=0.228 Sum_probs=439.5
Q ss_pred EEEecCCCCcccCCccccCCcccCeeeccccccccccCCCcCCcCCCcEEeCcCCcccccCChhhcCCCCCCeEeecCcc
Q 002214 37 SLTISDLGLAGTIPSHLGNLSSLQTLVLSRNWFSGTIPKEIGNLTKLKELHLDYNKLQGEIPEELGNLAELEMLVLNNNL 116 (952)
Q Consensus 37 ~l~l~~~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~ 116 (952)
.++.++.+++ .+|..+.. ++++|+|++|.|++..|..|..+++|++|+|++|++.+..|.+|+++++|++|+|++|+
T Consensus 16 ~~~c~~~~l~-~iP~~l~~--~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~ 92 (606)
T 3t6q_A 16 TYNCENLGLN-EIPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANP 92 (606)
T ss_dssp EEECTTSCCS-SCCTTSCT--TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred eEECCCCCcc-cCcCCCCC--cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCc
Confidence 5677777877 67877764 79999999999998889999999999999999999998889999999999999999999
Q ss_pred CccccCcccccccccccceeeccccccccCCCCCCCCCCccceEEcccCcccccCCccccCCCCCcEEEccCCcccccCC
Q 002214 117 LTGTIPASIFNLSFISTALDFSDNSLTGSFPYDMCPGLPRLKGLYVSYNQFKGPIPNNLWHCKELSSVSLSYNQFTGRLP 196 (952)
Q Consensus 117 l~~~~p~~~~~l~~l~~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~ 196 (952)
+++..|..+.++..+ +.|++++|++++ ++...+.++++|++|+|++|++++..+..+..+++|+.|++++|++++..|
T Consensus 93 l~~~~~~~~~~l~~L-~~L~L~~n~i~~-l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 170 (606)
T 3t6q_A 93 LIFMAETALSGPKAL-KHLFFIQTGISS-IDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSK 170 (606)
T ss_dssp CSEECTTTTSSCTTC-CEEECTTSCCSC-GGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECH
T ss_pred ccccChhhhcccccc-cEeeccccCccc-CCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccCh
Confidence 998888899888876 999999999984 544556889999999999999997554556669999999999999998889
Q ss_pred ccccccCCcc--EEEeeCCcCCccCchhhhccCCCcEeeecccccc--------------------------ccCCcccc
Q 002214 197 RDLGNSTKLK--SLDLGFNNLNGEIPQEIGNLRNLEILGIDQSNLV--------------------------GFVPDTIF 248 (952)
Q Consensus 197 ~~~~~l~~L~--~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~~~--------------------------~~~~~~~~ 248 (952)
..|+.+++|+ +|++++|.+++..|..+.. .+|+.|++++|... .+.+..+.
T Consensus 171 ~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~ 249 (606)
T 3t6q_A 171 EDMSSLQQATNLSLNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFE 249 (606)
T ss_dssp HHHHTTTTCCSEEEECTTCCCCEECTTTTTT-CEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGG
T ss_pred hhhhhhcccceeEEecCCCccCccChhHhhh-ccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhc
Confidence 9999999999 9999999999777766654 68999998876411 12223333
Q ss_pred CCC--CccEEEeeCccccccCCCCcccCCCCCcceEEcccCcCCCCCCcccccchhhhhhhccccCccccccccCcceee
Q 002214 249 NIS--TLKILSLFNNTLSGNLPSSKNLIGLPNLEGLNLGLNNLSGSIPSFFFNASKLYALELGYNSNLKRLGLERNYLTF 326 (952)
Q Consensus 249 ~l~--~L~~L~Ls~N~l~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l~l~~~~~L~~L~L~~n~l~~ 326 (952)
.+. +|+.|++++|.+++..+. .+..+++|++|++++|+++ .+|..+..+ ++|+.|++++|.++.
T Consensus 250 ~l~~~~L~~L~l~~n~l~~~~~~--~~~~l~~L~~L~l~~n~l~-~lp~~l~~l-----------~~L~~L~l~~n~l~~ 315 (606)
T 3t6q_A 250 GLCEMSVESINLQKHYFFNISSN--TFHCFSGLQELDLTATHLS-ELPSGLVGL-----------STLKKLVLSANKFEN 315 (606)
T ss_dssp GGGGSEEEEEECTTCCCSSCCTT--TTTTCTTCSEEECTTSCCS-CCCSSCCSC-----------TTCCEEECTTCCCSB
T ss_pred hhhcCceeEEEeecCccCccCHH--HhccccCCCEEeccCCccC-CCChhhccc-----------ccCCEEECccCCcCc
Confidence 333 799999999999876443 4788999999999999998 556655554 456666666666654
Q ss_pred chhhHHHHHHHhhccccccccCCCcccEEEccCCCCCCCC-CcccccCCCCcEEEccCccccCCC--CccccCCCcceEE
Q 002214 327 STSELMSLFSALVNCKSLKIGNLINLTTLSLGDNNLSGSL-PITLGRLKKLQGLDLQNNKFEGPI--PQEFCHFSRLYVV 403 (952)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~-~~~l~~l~~L~~L~L~~N~i~~~~--~~~~~~l~~L~~L 403 (952)
.+.. .++.+++|++|++++|.+.+.. +..+..+++|++|++++|.+++.. +..+..+++|+.|
T Consensus 316 ~~~~--------------~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L 381 (606)
T 3t6q_A 316 LCQI--------------SASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSL 381 (606)
T ss_dssp GGGG--------------CGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEE
T ss_pred Cchh--------------hhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEE
Confidence 4332 4678999999999999998555 456999999999999999998776 7889999999999
Q ss_pred EeccccccccCCCccCCCCCCcEEeccccccCCcCCc-cccCCCCCceeEecCCccCCCCchhhhcccccceeecCCccc
Q 002214 404 YLNRNKLSGSIPSCLGDLNSLRILSLSSNELTSVIPS-TFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNL 482 (952)
Q Consensus 404 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 482 (952)
++++|++.+..|..|..+++|++|++++|++++..+. .|..+++|+.|++++|.+++..|..+..+++|++|+|++|++
T Consensus 382 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 461 (606)
T 3t6q_A 382 NLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHF 461 (606)
T ss_dssp ECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBC
T ss_pred ECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCC
Confidence 9999999999999999999999999999999987654 489999999999999999998999999999999999999999
Q ss_pred CCC---CcccccCCCCCceEEccCccccCcccccccccccccEEeCCCCcccccCccchhcccccccccccccccccCCC
Q 002214 483 SGN---IPSTIIGLKNLQHLSLEHNKLQGPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFNKLVGEIP 559 (952)
Q Consensus 483 ~~~---~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 559 (952)
++. .+..+..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..|..+..++.| .|++++|++++.+|
T Consensus 462 ~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~ 540 (606)
T 3t6q_A 462 PKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILP 540 (606)
T ss_dssp GGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCG
T ss_pred CccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCH
Confidence 862 34679999999999999999998889999999999999999999999999999999999 99999999998777
Q ss_pred CC-CCcccccccccccCccCCCCCc
Q 002214 560 RG-GAFANFSAESFIGNDLLCGSPY 583 (952)
Q Consensus 560 ~~-~~~~~~~~~~~~~n~~~c~~p~ 583 (952)
.. ..+.++....+.+||+.|+|+.
T Consensus 541 ~~~~~l~~L~~L~l~~N~~~c~c~~ 565 (606)
T 3t6q_A 541 SLLPILSQQRTINLRQNPLDCTCSN 565 (606)
T ss_dssp GGHHHHHTSSEEECTTCCEECSGGG
T ss_pred hhcccCCCCCEEeCCCCCccccCCc
Confidence 53 3456777888999999999884
No 7
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=6.8e-55 Score=523.70 Aligned_cols=489 Identities=22% Similarity=0.187 Sum_probs=399.2
Q ss_pred CeEEEEEecCCCCcccCCccccCCcccCeeeccccccccccCCCcCCcCCCcEEeCcCCcccccCChhhcCCCCCCeEee
Q 002214 33 NRVTSLTISDLGLAGTIPSHLGNLSSLQTLVLSRNWFSGTIPKEIGNLTKLKELHLDYNKLQGEIPEELGNLAELEMLVL 112 (952)
Q Consensus 33 ~~~~~l~l~~~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 112 (952)
.++++|+++++.+++..|..++++++|++|+|++|.+++..|..|.++++|++|+|++|++.+..|.+|+++++|++|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 56888888888888777778888888888888888888777778888888888888888888777888888888888888
Q ss_pred cCccCccccCcccccccccccceeeccccccc-cCCCCCCCCCCccceEEcccCcccccCCccccCCCCCc----EEEcc
Q 002214 113 NNNLLTGTIPASIFNLSFISTALDFSDNSLTG-SFPYDMCPGLPRLKGLYVSYNQFKGPIPNNLWHCKELS----SVSLS 187 (952)
Q Consensus 113 ~~n~l~~~~p~~~~~l~~l~~~L~l~~n~l~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~----~L~L~ 187 (952)
++|.+++..|..++++..+ +.|++++|.+++ .+|.. +.++++|++|++++|++++..|..|..+.+|+ .|+++
T Consensus 112 ~~n~l~~~~~~~~~~l~~L-~~L~L~~n~l~~~~lp~~-~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~ 189 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITL-KKLNVAHNFIHSCKLPAY-FSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMS 189 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTC-CEEECCSSCCCCCCCCGG-GGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECT
T ss_pred cCCccccccccccCCCCCC-CEEeCCCCcccceechHh-HhhcCCCCEEEccCCcceecChhhhhhhhccccccceeecc
Confidence 8888885555777777765 888888888875 45543 45788888888888888877777777766655 78888
Q ss_pred CCcccccCCccccccCCccEEEeeCCcCC-ccCchhhhccCCCcEeee--------------------------------
Q 002214 188 YNQFTGRLPRDLGNSTKLKSLDLGFNNLN-GEIPQEIGNLRNLEILGI-------------------------------- 234 (952)
Q Consensus 188 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L-------------------------------- 234 (952)
+|.+++..+..+... +|++|++++|.+. +..|..++.+++|+.+.+
T Consensus 190 ~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l 268 (606)
T 3vq2_A 190 LNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRL 268 (606)
T ss_dssp TCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEE
T ss_pred CCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheec
Confidence 888886666666554 7888888888876 456777777877777666
Q ss_pred -ccccccccCCccccCCCCccEEEeeCccccccCCCCcccCCCCCcceEEcccCcCCCCCCcccccchhhhhhhccccCc
Q 002214 235 -DQSNLVGFVPDTIFNISTLKILSLFNNTLSGNLPSSKNLIGLPNLEGLNLGLNNLSGSIPSFFFNASKLYALELGYNSN 313 (952)
Q Consensus 235 -~~n~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l~l~~~~~ 313 (952)
..|.+.+..|. +..+++|+.|++++|.+.. ++ .+..+++|++|++++|++ +.+|. + .+++|+.++++.|..
T Consensus 269 ~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~-l~---~l~~~~~L~~L~l~~n~l-~~lp~-~-~l~~L~~L~l~~n~~ 340 (606)
T 3vq2_A 269 TYTNDFSDDIVK-FHCLANVSAMSLAGVSIKY-LE---DVPKHFKWQSLSIIRCQL-KQFPT-L-DLPFLKSLTLTMNKG 340 (606)
T ss_dssp CCCTTCCGGGGS-CGGGTTCSEEEEESCCCCC-CC---CCCTTCCCSEEEEESCCC-SSCCC-C-CCSSCCEEEEESCSS
T ss_pred cccccccccccc-cccCCCCCEEEecCccchh-hh---hccccccCCEEEcccccC-ccccc-C-CCCccceeeccCCcC
Confidence 44455555555 7788899999999998864 33 477788899999999998 45553 3 555555555544432
Q ss_pred cccccccCcceeechhhHHHHHHHhhccccccccCCCcccEEEccCCCCCCC--CCcccccCCCCcEEEccCccccCCCC
Q 002214 314 LKRLGLERNYLTFSTSELMSLFSALVNCKSLKIGNLINLTTLSLGDNNLSGS--LPITLGRLKKLQGLDLQNNKFEGPIP 391 (952)
Q Consensus 314 L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~--~~~~l~~l~~L~~L~L~~N~i~~~~~ 391 (952)
+.. ..++.+++|++|++++|++++. .+..+..+++|++|++++|.+.+ .|
T Consensus 341 ~~~---------------------------~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~ 392 (606)
T 3vq2_A 341 SIS---------------------------FKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MS 392 (606)
T ss_dssp CEE---------------------------CCCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-EC
T ss_pred ccc---------------------------hhhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-ch
Confidence 211 1356788999999999999865 37888999999999999999985 55
Q ss_pred ccccCCCcceEEEeccccccccCC-CccCCCCCCcEEeccccccCCcCCccccCCCCCceeEecCCccCC-CCchhhhcc
Q 002214 392 QEFCHFSRLYVVYLNRNKLSGSIP-SCLGDLNSLRILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNG-SLPLEIENL 469 (952)
Q Consensus 392 ~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l 469 (952)
..|..+++|+.|++++|++.+..| ..+..+++|++|++++|++++..|..|..+++|+.|++++|++++ ..|..+..+
T Consensus 393 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l 472 (606)
T 3vq2_A 393 ANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANT 472 (606)
T ss_dssp CCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTC
T ss_pred hhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccC
Confidence 888999999999999999998777 688999999999999999999899999999999999999999987 478889999
Q ss_pred cccceeecCCcccCCCCcccccCCCCCceEEccCccccCcccccccccccccEEeCCCCcccccCccchhccc-cccccc
Q 002214 470 KAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNKLQGPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLL-YLKSLN 548 (952)
Q Consensus 470 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~ 548 (952)
++|+.|+|++|++++..|..|..+++|++|+|++|++++..|..|..+++|+.|+|++|+|+ .+|..+..++ +|+.|+
T Consensus 473 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~ 551 (606)
T 3vq2_A 473 TNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFN 551 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEE
T ss_pred CCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEE
Confidence 99999999999999888999999999999999999999888999999999999999999998 5666688887 599999
Q ss_pred ccccccccCCCCC
Q 002214 549 LSFNKLVGEIPRG 561 (952)
Q Consensus 549 l~~N~l~~~~p~~ 561 (952)
+++|+|.|.++..
T Consensus 552 l~~N~~~c~c~~~ 564 (606)
T 3vq2_A 552 LTNNSVACICEHQ 564 (606)
T ss_dssp CCSCCCCCSSTTH
T ss_pred ccCCCcccCCccH
Confidence 9999999988864
No 8
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.5e-54 Score=537.80 Aligned_cols=520 Identities=24% Similarity=0.246 Sum_probs=304.7
Q ss_pred CCCCceEEEeCCCCeEEEEEecCCCCcccCCccccCCcccCeeecccccccccc-CCCcCCcCCCcEEeCcCCcccccCC
Q 002214 20 VCSWMGITCDVYGNRVTSLTISDLGLAGTIPSHLGNLSSLQTLVLSRNWFSGTI-PKEIGNLTKLKELHLDYNKLQGEIP 98 (952)
Q Consensus 20 ~c~w~~v~c~~~~~~~~~l~l~~~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~-p~~l~~l~~L~~L~L~~n~l~~~~p 98 (952)
.|.|.+|-+ ...++++|||++|.+++..|..|+++++|++|+|++|.+.+.+ |..|.++++|++|+|++|++.+..|
T Consensus 13 ~~~L~~vP~--lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p 90 (844)
T 3j0a_A 13 FCNLTQVPQ--VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHP 90 (844)
T ss_dssp CCCSSCCCS--SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECT
T ss_pred CCCCCCCCC--CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCH
Confidence 466777766 4568899999999998888889999999999999999666566 7789999999999999999998889
Q ss_pred hhhcCCCCCCeEeecCccCccccCcc--cccccccccceeeccccccccCCCCCCCCCCccceEEcccCcccccCCcccc
Q 002214 99 EELGNLAELEMLVLNNNLLTGTIPAS--IFNLSFISTALDFSDNSLTGSFPYDMCPGLPRLKGLYVSYNQFKGPIPNNLW 176 (952)
Q Consensus 99 ~~l~~l~~L~~L~L~~n~l~~~~p~~--~~~l~~l~~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~ 176 (952)
.+|+++++|++|+|++|.+++.+|.. +.+++.+ +.|++++|.+++..+...+.++++|++|+|++|.+++..+..+.
T Consensus 91 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L-~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~ 169 (844)
T 3j0a_A 91 DAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKAL-TRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELE 169 (844)
T ss_dssp TSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSC-CEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGH
T ss_pred hHccCCcccCEeeCcCCCCCcccccCccccccCCC-CEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcc
Confidence 99999999999999999998766665 7777765 88999999998766666778899999999999999888888888
Q ss_pred CC--CCCcEEEccCCcccccCCccccccCC------ccEEEeeCCcCCccCchhhhcc---CCCcEeeecc---------
Q 002214 177 HC--KELSSVSLSYNQFTGRLPRDLGNSTK------LKSLDLGFNNLNGEIPQEIGNL---RNLEILGIDQ--------- 236 (952)
Q Consensus 177 ~l--~~L~~L~L~~N~l~~~~~~~~~~l~~------L~~L~L~~N~l~~~~p~~~~~l---~~L~~L~L~~--------- 236 (952)
.+ ++|+.|++++|.+.+..|..++.+.+ |++|+|++|.+++..|..+... .+++.|.++.
T Consensus 170 ~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~ 249 (844)
T 3j0a_A 170 PLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGF 249 (844)
T ss_dssp HHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSC
T ss_pred cccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccc
Confidence 77 88999999999998888877776665 8999999998877666665543 2333333331
Q ss_pred ccccccCCccccCC--CCccEEEeeCccccccCCCCcccCCCCCcceEEcccCcCCCCCCcccccchhhhhhhccccCcc
Q 002214 237 SNLVGFVPDTIFNI--STLKILSLFNNTLSGNLPSSKNLIGLPNLEGLNLGLNNLSGSIPSFFFNASKLYALELGYNSNL 314 (952)
Q Consensus 237 n~~~~~~~~~~~~l--~~L~~L~Ls~N~l~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l~l~~~~~L 314 (952)
+++....+..|..+ ++|+.|++++|.+.+..+. .+..+++|+.|+|++|++++..+..|.++++|
T Consensus 250 ~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~--~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L----------- 316 (844)
T 3j0a_A 250 HNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSR--VFETLKDLKVLNLAYNKINKIADEAFYGLDNL----------- 316 (844)
T ss_dssp SSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSC--CSSSCCCCCEEEEESCCCCEECTTTTTTCSSC-----------
T ss_pred cccCCCChhhhhccccCCccEEECCCCcccccChh--hhhcCCCCCEEECCCCcCCCCChHHhcCCCCC-----------
Confidence 11222222222222 3455555555555443222 24445555555555555554444444333322
Q ss_pred ccccccCcceeechhhHHHHHHHhhccccccccCCCcccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCccc
Q 002214 315 KRLGLERNYLTFSTSELMSLFSALVNCKSLKIGNLINLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEF 394 (952)
Q Consensus 315 ~~L~L~~n~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~ 394 (952)
+.|++++|.++.... ..++.+++|+.|++++|+++.+.+..|..+++|++|+|++|.++++.
T Consensus 317 ~~L~Ls~N~l~~~~~--------------~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~---- 378 (844)
T 3j0a_A 317 QVLNLSYNLLGELYS--------------SNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIH---- 378 (844)
T ss_dssp CEEEEESCCCSCCCS--------------CSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCS----
T ss_pred CEEECCCCCCCccCH--------------HHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCccc----
Confidence 222223332221111 12344555555555555555444444555555555555555554211
Q ss_pred cCCCcceEEEeccccccccCCCccCCCCCCcEEeccccccCCcCCc-cccCCCCCceeEecCCccCCCCch-hhhccccc
Q 002214 395 CHFSRLYVVYLNRNKLSGSIPSCLGDLNSLRILSLSSNELTSVIPS-TFWNLEDILGFDFSSNSLNGSLPL-EIENLKAV 472 (952)
Q Consensus 395 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L 472 (952)
.+++|+.|++++|+++ .+|.. ..+++.|++++|++++.... .+..+++|+.|+|++|++++..+. .+..+++|
T Consensus 379 -~~~~L~~L~l~~N~l~-~l~~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L 453 (844)
T 3j0a_A 379 -FIPSIPDIFLSGNKLV-TLPKI---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSL 453 (844)
T ss_dssp -SCCSCSEEEEESCCCC-CCCCC---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTC
T ss_pred -CCCCcchhccCCCCcc-ccccc---ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCcc
Confidence 1444555555555554 22221 23444444444444433211 123444444444444444432221 23334444
Q ss_pred ceeecCCcccC-----CCCcccccCCCCCceEEccCccccCcccccccccccccEEeCCCCcccccCccchhcccccccc
Q 002214 473 VDIYLSRNNLS-----GNIPSTIIGLKNLQHLSLEHNKLQGPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSL 547 (952)
Q Consensus 473 ~~L~Ls~N~l~-----~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 547 (952)
+.|+|++|.++ +..+..|.++++|+.|+|++|+|++.+|..|..+++|+.|+|++|+|++.+|..+. ++|+.|
T Consensus 454 ~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L 531 (844)
T 3j0a_A 454 EQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEIL 531 (844)
T ss_dssp CBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEE
T ss_pred ccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEE
Confidence 44444444443 22223344444444444444444444444444444444444444444444333333 444444
Q ss_pred cccccccccCCCCCCCcccccccccccCccCCCCC
Q 002214 548 NLSFNKLVGEIPRGGAFANFSAESFIGNDLLCGSP 582 (952)
Q Consensus 548 ~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~p 582 (952)
+|++|++++.+|. .|..+....+.+|||.|+|+
T Consensus 532 ~Ls~N~l~~~~~~--~~~~L~~l~l~~Np~~C~c~ 564 (844)
T 3j0a_A 532 DISRNQLLAPNPD--VFVSLSVLDITHNKFICECE 564 (844)
T ss_dssp EEEEECCCCCCSC--CCSSCCEEEEEEECCCCSSS
T ss_pred ECCCCcCCCCChh--HhCCcCEEEecCCCcccccc
Confidence 4444444444442 23344444444444444444
No 9
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=4.9e-54 Score=516.24 Aligned_cols=507 Identities=21% Similarity=0.206 Sum_probs=434.0
Q ss_pred EEEEecCCCCcccCCccccCCcccCeeeccccccccccCCCcCCcCCCcEEeCcCCcccccCChhhcCCCCCCeEeecCc
Q 002214 36 TSLTISDLGLAGTIPSHLGNLSSLQTLVLSRNWFSGTIPKEIGNLTKLKELHLDYNKLQGEIPEELGNLAELEMLVLNNN 115 (952)
Q Consensus 36 ~~l~l~~~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n 115 (952)
+.++.++.+++ .+|..+. +++++|+|++|.+++..+..|.++++|++|+|++|++.+..|.+|+++++|++|+|++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n 90 (606)
T 3vq2_A 14 ITYQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGN 90 (606)
T ss_dssp TEEECTTSCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTC
T ss_pred CceEccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCC
Confidence 46788899987 7887765 79999999999999888889999999999999999999888999999999999999999
Q ss_pred cCccccCcccccccccccceeeccccccccCCCCCCCCCCccceEEcccCcccc-cCCccccCCCCCcEEEccCCccccc
Q 002214 116 LLTGTIPASIFNLSFISTALDFSDNSLTGSFPYDMCPGLPRLKGLYVSYNQFKG-PIPNNLWHCKELSSVSLSYNQFTGR 194 (952)
Q Consensus 116 ~l~~~~p~~~~~l~~l~~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~l~~l~~L~~L~L~~N~l~~~ 194 (952)
++++..|..+.++..+ ++|++++|+++ .++...+.++++|++|++++|++++ .+|..|+++++|++|++++|++++.
T Consensus 91 ~l~~~~p~~~~~l~~L-~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~ 168 (606)
T 3vq2_A 91 PIQSFSPGSFSGLTSL-ENLVAVETKLA-SLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTI 168 (606)
T ss_dssp CCCCCCTTSSTTCTTC-CEEECTTSCCC-CSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEE
T ss_pred cccccChhhcCCcccC-CEEEccCCccc-cccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceec
Confidence 9997779999999876 99999999998 4555557899999999999999986 5799999999999999999999999
Q ss_pred CCccccccCCcc----EEEeeCCcCCccCchhhhccCCCcEeeecccccc-ccCCccccCCCCccEEEee----------
Q 002214 195 LPRDLGNSTKLK----SLDLGFNNLNGEIPQEIGNLRNLEILGIDQSNLV-GFVPDTIFNISTLKILSLF---------- 259 (952)
Q Consensus 195 ~~~~~~~l~~L~----~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~~~-~~~~~~~~~l~~L~~L~Ls---------- 259 (952)
.|..|+.+++|+ +|++++|.+++..+..+... +|+.|++++|.+. ...|..+.++++|+.+++.
T Consensus 169 ~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l 247 (606)
T 3vq2_A 169 TVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNL 247 (606)
T ss_dssp CTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCC
T ss_pred ChhhhhhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcc
Confidence 899999888776 89999999996666666555 9999999999886 4566777788888877774
Q ss_pred -----------------------CccccccCCCCcccCCCCCcceEEcccCcCCCCCCcccccchhhhhhhccccCcccc
Q 002214 260 -----------------------NNTLSGNLPSSKNLIGLPNLEGLNLGLNNLSGSIPSFFFNASKLYALELGYNSNLKR 316 (952)
Q Consensus 260 -----------------------~N~l~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l~l~~~~~L~~ 316 (952)
.|.+.+..+. +..+++|+.|++++|.+... | .+.. +.+|+.
T Consensus 248 ~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~---~~~l~~L~~L~l~~~~~~~l-~-~l~~-----------~~~L~~ 311 (606)
T 3vq2_A 248 EIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK---FHCLANVSAMSLAGVSIKYL-E-DVPK-----------HFKWQS 311 (606)
T ss_dssp SCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGS---CGGGTTCSEEEEESCCCCCC-C-CCCT-----------TCCCSE
T ss_pred cccChHHhhhhhhccHhheeccccccccccccc---cccCCCCCEEEecCccchhh-h-hccc-----------cccCCE
Confidence 3444444332 55667777788887777643 3 3333 345666
Q ss_pred ccccCcceeechhhHHHHHHHhhccccccccCCCcccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCC--CCccc
Q 002214 317 LGLERNYLTFSTSELMSLFSALVNCKSLKIGNLINLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGP--IPQEF 394 (952)
Q Consensus 317 L~L~~n~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~--~~~~~ 394 (952)
|++++|.+...+ .+ .+++|++|++++|...+.. .+..+++|++|++++|.+++. .+..+
T Consensus 312 L~l~~n~l~~lp----------------~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~ 372 (606)
T 3vq2_A 312 LSIIRCQLKQFP----------------TL-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSD 372 (606)
T ss_dssp EEEESCCCSSCC----------------CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHH
T ss_pred EEcccccCcccc----------------cC-CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhh
Confidence 777777664433 14 7889999999999665433 678999999999999999866 38889
Q ss_pred cCCCcceEEEeccccccccCCCccCCCCCCcEEeccccccCCcCC-ccccCCCCCceeEecCCccCCCCchhhhcccccc
Q 002214 395 CHFSRLYVVYLNRNKLSGSIPSCLGDLNSLRILSLSSNELTSVIP-STFWNLEDILGFDFSSNSLNGSLPLEIENLKAVV 473 (952)
Q Consensus 395 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 473 (952)
..+++|+.|++++|.+++ +|..+..+++|+.|++++|++++..+ ..|..+++|+.|++++|.+.+..|..+..+++|+
T Consensus 373 ~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 451 (606)
T 3vq2_A 373 LGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLN 451 (606)
T ss_dssp HCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCC
T ss_pred ccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCC
Confidence 999999999999999994 66889999999999999999999887 7899999999999999999999999999999999
Q ss_pred eeecCCcccCC-CCcccccCCCCCceEEccCccccCcccccccccccccEEeCCCCcccccCccchhccccccccccccc
Q 002214 474 DIYLSRNNLSG-NIPSTIIGLKNLQHLSLEHNKLQGPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFN 552 (952)
Q Consensus 474 ~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N 552 (952)
+|++++|++++ .+|..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++.+|..|..+++|+.|++++|
T Consensus 452 ~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N 531 (606)
T 3vq2_A 452 TLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFN 531 (606)
T ss_dssp EEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTS
T ss_pred EEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCC
Confidence 99999999997 47889999999999999999999988999999999999999999999999999999999999999999
Q ss_pred ccccCCCCC-CCcc-cccccccccCccCCCCCccC
Q 002214 553 KLVGEIPRG-GAFA-NFSAESFIGNDLLCGSPYLH 585 (952)
Q Consensus 553 ~l~~~~p~~-~~~~-~~~~~~~~~n~~~c~~p~~~ 585 (952)
+++ .+|.. ..+. ++....+.+||+.|+|+..+
T Consensus 532 ~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~~~ 565 (606)
T 3vq2_A 532 RIE-TSKGILQHFPKSLAFFNLTNNSVACICEHQK 565 (606)
T ss_dssp CCC-CEESCGGGSCTTCCEEECCSCCCCCSSTTHH
T ss_pred cCc-ccCHhHhhhcccCcEEEccCCCcccCCccHH
Confidence 999 45543 2232 46677889999999999643
No 10
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2.9e-55 Score=526.14 Aligned_cols=476 Identities=21% Similarity=0.316 Sum_probs=351.1
Q ss_pred ccCCCCCCCCC---ceEEEeCCCCeEEEEEecCCCCcccCCccccCCcccCeeeccccccc------c------ccCCCc
Q 002214 13 NWTSNASVCSW---MGITCDVYGNRVTSLTISDLGLAGTIPSHLGNLSSLQTLVLSRNWFS------G------TIPKEI 77 (952)
Q Consensus 13 ~~~~~~~~c~w---~~v~c~~~~~~~~~l~l~~~~~~~~~p~~l~~l~~L~~L~L~~n~l~------~------~~p~~l 77 (952)
+|..+++||.| .||+|+.. ++|++|+|+++++.|.+|+.|+++++|++|+|++|.+. + .+|...
T Consensus 59 ~W~~~~~~c~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~ 137 (636)
T 4eco_A 59 NWNFNKELDMWGAQPGVSLNSN-GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ 137 (636)
T ss_dssp CCCCSSCGGGTTCCTTEEECTT-CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH
T ss_pred CCCCCCCcccccCCCCeEEcCC-CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH
Confidence 89878999999 99999865 69999999999999999999999999999999999872 2 334333
Q ss_pred CCcCCCcEEeCcCCcccccCChhhcC-CCCCCeEeecCccCccccCcccccccccccceeeccccccccCCCCCCCCCCc
Q 002214 78 GNLTKLKELHLDYNKLQGEIPEELGN-LAELEMLVLNNNLLTGTIPASIFNLSFISTALDFSDNSLTGSFPYDMCPGLPR 156 (952)
Q Consensus 78 ~~l~~L~~L~L~~n~l~~~~p~~l~~-l~~L~~L~L~~n~l~~~~p~~~~~l~~l~~~L~l~~n~l~~~~~~~~~~~l~~ 156 (952)
+..|+ +++++|.+.+..|..++. +..+..+++....+... ....+.. ..+...+|+++| +|.. +..+++
T Consensus 138 --~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~---~~~~l~~--l~l~~~~n~l~~-ip~~-l~~l~~ 207 (636)
T 4eco_A 138 --KQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKS---SRITLKD--TQIGQLSNNITF-VSKA-VMRLTK 207 (636)
T ss_dssp --HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCC---CCCCCCT--TTTTCCSCEEEE-ECGG-GGGCTT
T ss_pred --HHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCccccccccc---cccchhh--hhhccccCCCcc-CCHH-HhcccC
Confidence 55677 788888877777666552 12222233322221100 0000000 122233566776 6654 456778
Q ss_pred cceEEcccCccccc-----------------CCcccc--CCCCCcEEEccCCcccccCCccccccCCccEEEeeCCc-CC
Q 002214 157 LKGLYVSYNQFKGP-----------------IPNNLW--HCKELSSVSLSYNQFTGRLPRDLGNSTKLKSLDLGFNN-LN 216 (952)
Q Consensus 157 L~~L~L~~n~l~~~-----------------~~~~l~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~ 216 (952)
|++|+|++|++++. +|..+. ++++|++|+|++|++.+.+|..|+++++|++|+|++|+ ++
T Consensus 208 L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~ 287 (636)
T 4eco_A 208 LRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGIS 287 (636)
T ss_dssp CCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSC
T ss_pred CCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCc
Confidence 88888888888864 788888 88888888888888888888888888888888888887 87
Q ss_pred c-cCchhhhcc------CCCcEeeeccccccccCCc--cccCCCCccEEEeeCccccccCCCCcccCCCCCcceEEcccC
Q 002214 217 G-EIPQEIGNL------RNLEILGIDQSNLVGFVPD--TIFNISTLKILSLFNNTLSGNLPSSKNLIGLPNLEGLNLGLN 287 (952)
Q Consensus 217 ~-~~p~~~~~l------~~L~~L~L~~n~~~~~~~~--~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~L~~L~L~~N 287 (952)
+ .+|..++.+ ++|+.|++++|++. .+|. .+.++++|++|++++|++++.+| .+..+++|++|++++|
T Consensus 288 ~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip---~~~~l~~L~~L~L~~N 363 (636)
T 4eco_A 288 GEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP---AFGSEIKLASLNLAYN 363 (636)
T ss_dssp HHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC---CCEEEEEESEEECCSS
T ss_pred cccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh---hhCCCCCCCEEECCCC
Confidence 7 788888776 88888888888887 5666 78888888888888888876666 3666777888888888
Q ss_pred cCCCCCCcccccchhhhhhhccccCccccccccCcceeechhhHHHHHHHhhccccccccCCCc-ccEEEccCCCCCCCC
Q 002214 288 NLSGSIPSFFFNASKLYALELGYNSNLKRLGLERNYLTFSTSELMSLFSALVNCKSLKIGNLIN-LTTLSLGDNNLSGSL 366 (952)
Q Consensus 288 ~l~~~~~~~~~~~~~L~~l~l~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~~~~~~l~~-L~~L~L~~n~l~~~~ 366 (952)
+++ .+|.. ++.+++ |++|++++|+++ .+
T Consensus 364 ~l~-~lp~~-------------------------------------------------l~~l~~~L~~L~Ls~N~l~-~l 392 (636)
T 4eco_A 364 QIT-EIPAN-------------------------------------------------FCGFTEQVENLSFAHNKLK-YI 392 (636)
T ss_dssp EEE-ECCTT-------------------------------------------------SEEECTTCCEEECCSSCCS-SC
T ss_pred ccc-cccHh-------------------------------------------------hhhhcccCcEEEccCCcCc-cc
Confidence 777 44433 234556 777777777777 56
Q ss_pred CcccccCC--CCcEEEccCccccCCCCcccc-------CCCcceEEEeccccccccCCCccCCCCCCcEEeccccccCCc
Q 002214 367 PITLGRLK--KLQGLDLQNNKFEGPIPQEFC-------HFSRLYVVYLNRNKLSGSIPSCLGDLNSLRILSLSSNELTSV 437 (952)
Q Consensus 367 ~~~l~~l~--~L~~L~L~~N~i~~~~~~~~~-------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 437 (952)
|..+..++ +|++|++++|.+.+..|..|. .+++|+.|+|++|++++..+..+..+++|++|+|++|+++.+
T Consensus 393 p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i 472 (636)
T 4eco_A 393 PNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEI 472 (636)
T ss_dssp CSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBC
T ss_pred chhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCc
Confidence 66666544 788888888888777777777 667788888888888744444455678888888888888765
Q ss_pred CCccccCCC-------CCceeEecCCccCCCCchhhh--cccccceeecCCcccCCCCcccccCCCCCceEEc------c
Q 002214 438 IPSTFWNLE-------DILGFDFSSNSLNGSLPLEIE--NLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSL------E 502 (952)
Q Consensus 438 ~~~~~~~l~-------~L~~L~Ls~N~l~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L------~ 502 (952)
++..+.... +|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+| +
T Consensus 473 ~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls 550 (636)
T 4eco_A 473 PKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQ 550 (636)
T ss_dssp CSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTT
T ss_pred CHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccc
Confidence 555555443 7888888888888 5676665 78888888888888886 6777888888888888 5
Q ss_pred CccccCcccccccccccccEEeCCCCcccccCccchhcccccccccccccccccCCC
Q 002214 503 HNKLQGPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFNKLVGEIP 559 (952)
Q Consensus 503 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 559 (952)
+|++.+.+|..+..+++|+.|+|++|+|+ .+|..+. ++|+.|++++|++.+..+
T Consensus 551 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~~~ 604 (636)
T 4eco_A 551 GNRTLREWPEGITLCPSLTQLQIGSNDIR-KVNEKIT--PNISVLDIKDNPNISIDL 604 (636)
T ss_dssp CCBCCCCCCTTGGGCSSCCEEECCSSCCC-BCCSCCC--TTCCEEECCSCTTCEEEC
T ss_pred cCcccccChHHHhcCCCCCEEECCCCcCC-ccCHhHh--CcCCEEECcCCCCccccH
Confidence 67778888888888999999999999984 6676655 788999999998876443
No 11
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=4.7e-53 Score=524.43 Aligned_cols=504 Identities=23% Similarity=0.204 Sum_probs=422.6
Q ss_pred EEEEecCCCCcccCCccccCCcccCeeeccccccccccCCCcCCcCCCcEEeCcCCcccccC-ChhhcCCCCCCeEeecC
Q 002214 36 TSLTISDLGLAGTIPSHLGNLSSLQTLVLSRNWFSGTIPKEIGNLTKLKELHLDYNKLQGEI-PEELGNLAELEMLVLNN 114 (952)
Q Consensus 36 ~~l~l~~~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~-p~~l~~l~~L~~L~L~~ 114 (952)
...|.++++++ .+|. ..++|++|+|++|.|++..|..|..+++|++|+|++|...+.+ |.+|+++++|++|+|++
T Consensus 7 ~~~dcs~~~L~-~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~ 82 (844)
T 3j0a_A 7 RIAFYRFCNLT-QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGS 82 (844)
T ss_dssp EEEEESCCCSS-CCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTT
T ss_pred eEEEccCCCCC-CCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCC
Confidence 56777888888 6776 5589999999999999888999999999999999999655455 88999999999999999
Q ss_pred ccCccccCcccccccccccceeeccccccccCCC-CCCCCCCccceEEcccCcccccCC-ccccCCCCCcEEEccCCccc
Q 002214 115 NLLTGTIPASIFNLSFISTALDFSDNSLTGSFPY-DMCPGLPRLKGLYVSYNQFKGPIP-NNLWHCKELSSVSLSYNQFT 192 (952)
Q Consensus 115 n~l~~~~p~~~~~l~~l~~~L~l~~n~l~~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~L~~N~l~ 192 (952)
|.+++..|..+.++..+ +.|++++|.+++.+|. ..+..+++|++|+|++|++++..+ ..|+++++|+.|+|++|.++
T Consensus 83 N~l~~~~p~~~~~l~~L-~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~ 161 (844)
T 3j0a_A 83 SKIYFLHPDAFQGLFHL-FELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIF 161 (844)
T ss_dssp CCCCEECTTSSCSCSSC-CCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCC
T ss_pred CcCcccCHhHccCCccc-CEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCC
Confidence 99998889999998876 9999999999986654 457899999999999999987654 57999999999999999999
Q ss_pred ccCCcccccc--CCccEEEeeCCcCCccCchhhhccCC------CcEeeeccccccccCCccccCC---CCccEEEeeCc
Q 002214 193 GRLPRDLGNS--TKLKSLDLGFNNLNGEIPQEIGNLRN------LEILGIDQSNLVGFVPDTIFNI---STLKILSLFNN 261 (952)
Q Consensus 193 ~~~~~~~~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~------L~~L~L~~n~~~~~~~~~~~~l---~~L~~L~Ls~N 261 (952)
+..+..++.+ ++|+.|+|++|.+.+..|..++.+.+ |+.|++++|++.+..+..+... .+++.|.++.+
T Consensus 162 ~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~ 241 (844)
T 3j0a_A 162 LVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHH 241 (844)
T ss_dssp CCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSS
T ss_pred eeCHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccc
Confidence 9999999988 89999999999999888888777766 9999999999988877777643 67888988754
Q ss_pred cccccC-------CCCcccCCC--CCcceEEcccCcCCCCCCcccccchhhhhhhccccCccccccccCcceeechhhHH
Q 002214 262 TLSGNL-------PSSKNLIGL--PNLEGLNLGLNNLSGSIPSFFFNASKLYALELGYNSNLKRLGLERNYLTFSTSELM 332 (952)
Q Consensus 262 ~l~~~~-------~~~~~l~~l--~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l~l~~~~~L~~L~L~~n~l~~~~~~~~ 332 (952)
.+.... +....+.++ ++|+.|++++|.+.+..+..|..+++ |+.|++++|.++..+..
T Consensus 242 ~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~-----------L~~L~L~~n~i~~~~~~-- 308 (844)
T 3j0a_A 242 IMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKD-----------LKVLNLAYNKINKIADE-- 308 (844)
T ss_dssp CCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCC-----------CCEEEEESCCCCEECTT--
T ss_pred cccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCC-----------CCEEECCCCcCCCCChH--
Confidence 332111 011223443 78999999999999888888766654 55566666666544332
Q ss_pred HHHHHhhccccccccCCCcccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCccccCCCcceEEEeccccccc
Q 002214 333 SLFSALVNCKSLKIGNLINLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSG 412 (952)
Q Consensus 333 ~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 412 (952)
.|+++++|++|+|++|++++..+..|..+++|++|++++|.|..+.+..|..+++|+.|+|++|.+++
T Consensus 309 ------------~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~ 376 (844)
T 3j0a_A 309 ------------AFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTT 376 (844)
T ss_dssp ------------TTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCC
T ss_pred ------------HhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCc
Confidence 46789999999999999998889999999999999999999998889999999999999999999984
Q ss_pred cCCCccCCCCCCcEEeccccccCCcCCccccCCCCCceeEecCCccCCCC-chhhhcccccceeecCCcccCCCCcc-cc
Q 002214 413 SIPSCLGDLNSLRILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSL-PLEIENLKAVVDIYLSRNNLSGNIPS-TI 490 (952)
Q Consensus 413 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~ 490 (952)
. ..+++|+.|++++|+++.++. . ..+++.|++++|++++.. +..+..+++|+.|+|++|++++..+. .+
T Consensus 377 i-----~~~~~L~~L~l~~N~l~~l~~-~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 447 (844)
T 3j0a_A 377 I-----HFIPSIPDIFLSGNKLVTLPK-I---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTP 447 (844)
T ss_dssp C-----SSCCSCSEEEEESCCCCCCCC-C---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSS
T ss_pred c-----cCCCCcchhccCCCCcccccc-c---ccccceeecccCccccCchhhhhhcCCccceeeCCCCccccccccccc
Confidence 3 338899999999999996533 2 568999999999999643 33456899999999999999976544 46
Q ss_pred cCCCCCceEEccCcccc-----CcccccccccccccEEeCCCCcccccCccchhcccccccccccccccccCCCCCCCcc
Q 002214 491 IGLKNLQHLSLEHNKLQ-----GPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFNKLVGEIPRGGAFA 565 (952)
Q Consensus 491 ~~l~~L~~L~L~~N~l~-----~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~ 565 (952)
..+++|+.|+|++|.++ +..+..|..+++|+.|+|++|+|++.+|..|..+++|+.|+|++|++++..|.... .
T Consensus 448 ~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~-~ 526 (844)
T 3j0a_A 448 SENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP-A 526 (844)
T ss_dssp CSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC-S
T ss_pred ccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh-c
Confidence 67899999999999997 44456799999999999999999999999999999999999999999986665433 6
Q ss_pred cccccccccCccCC
Q 002214 566 NFSAESFIGNDLLC 579 (952)
Q Consensus 566 ~~~~~~~~~n~~~c 579 (952)
++....+.+|....
T Consensus 527 ~L~~L~Ls~N~l~~ 540 (844)
T 3j0a_A 527 NLEILDISRNQLLA 540 (844)
T ss_dssp CCCEEEEEEECCCC
T ss_pred cccEEECCCCcCCC
Confidence 66667777775543
No 12
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=5.4e-53 Score=513.20 Aligned_cols=481 Identities=20% Similarity=0.280 Sum_probs=349.3
Q ss_pred cCCCCccccccCCCCCC--CCC------------ceEEEeCCCCeEEEEEecCCCCcccCCccccCCcccCeeec-cccc
Q 002214 4 DNPNNILAQNWTSNASV--CSW------------MGITCDVYGNRVTSLTISDLGLAGTIPSHLGNLSSLQTLVL-SRNW 68 (952)
Q Consensus 4 ~~~~~~~~~~~~~~~~~--c~w------------~~v~c~~~~~~~~~l~l~~~~~~~~~p~~l~~l~~L~~L~L-~~n~ 68 (952)
.||+|.-+.+|.+ .++ |.| .||+|+. .++|+.|+|+++++.|.+|+.|++|++|++|+| ++|.
T Consensus 282 ~~~~W~~~~~~~~-~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~ 359 (876)
T 4ecn_A 282 DGKNWRYYSGTIN-NTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSE 359 (876)
T ss_dssp TGGGCCCCCSSCS-SCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTH
T ss_pred CCCCCCcCCCccc-ccCCccccccccccccccCcCceEecC-CCCEEEEECccCCCCCcCchHHhccccceEeeeccccc
Confidence 3565555544532 244 999 9999997 579999999999999999999999999999999 8898
Q ss_pred cccccCCCc---------------------------------------------------CCcCCCcEEeCcC--Ccccc
Q 002214 69 FSGTIPKEI---------------------------------------------------GNLTKLKELHLDY--NKLQG 95 (952)
Q Consensus 69 l~~~~p~~l---------------------------------------------------~~l~~L~~L~L~~--n~l~~ 95 (952)
++|..|-.. .....++.+.+.. |++.+
T Consensus 360 lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~ 439 (876)
T 4ecn_A 360 TVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF 439 (876)
T ss_dssp HHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE
T ss_pred ccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccccccccchhhceeccccCcccc
Confidence 877643221 1122344444443 77876
Q ss_pred cCChhhcCCCCCCeEeecCccCcc-ccCcccccccccccceeeccccccccCCCCC-CCCCCccceEEcccCcccccCCc
Q 002214 96 EIPEELGNLAELEMLVLNNNLLTG-TIPASIFNLSFISTALDFSDNSLTGSFPYDM-CPGLPRLKGLYVSYNQFKGPIPN 173 (952)
Q Consensus 96 ~~p~~l~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~l~~~L~l~~n~l~~~~~~~~-~~~l~~L~~L~L~~n~l~~~~~~ 173 (952)
+|..|+++++|++|+|++|++++ .+|..+. ..+.|.++|.+|..+ |.++++|++|+|++|++.+.+|.
T Consensus 440 -IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~---------~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~ 509 (876)
T 4ecn_A 440 -ISKAIQRLTKLQIIYFANSPFTYDNIAVDWE---------DANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPD 509 (876)
T ss_dssp -ECGGGGGCTTCCEEEEESCCCCGGGBSSSCS---------CTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCG
T ss_pred -hhHHHhcCCCCCEEECcCCcCCCCccccccc---------ccccccccccCChhhhhccCCCCCEEECcCCCCCccChH
Confidence 78888888888888888888886 2333222 122345555677766 34788888888888888888888
Q ss_pred cccCCCCCcEEEccCCc-ccc-cCCccccccC-------CccEEEeeCCcCCccCch--hhhccCCCcEeeecccccccc
Q 002214 174 NLWHCKELSSVSLSYNQ-FTG-RLPRDLGNST-------KLKSLDLGFNNLNGEIPQ--EIGNLRNLEILGIDQSNLVGF 242 (952)
Q Consensus 174 ~l~~l~~L~~L~L~~N~-l~~-~~~~~~~~l~-------~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~L~~n~~~~~ 242 (952)
.|.++++|+.|+|++|+ +++ .+|..++.++ +|++|+|++|+++ .+|. .|+.+++|+.|+|++|++. .
T Consensus 510 ~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~ 587 (876)
T 4ecn_A 510 FLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-H 587 (876)
T ss_dssp GGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-B
T ss_pred HHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-c
Confidence 88888888888888887 887 6787777666 8888999988888 7777 8888888899999888888 5
Q ss_pred CCccccCCCCccEEEeeCccccccCCCCcccCCCCC-cceEEcccCcCCCCCCcccccchhhhhhhccccCccccccccC
Q 002214 243 VPDTIFNISTLKILSLFNNTLSGNLPSSKNLIGLPN-LEGLNLGLNNLSGSIPSFFFNASKLYALELGYNSNLKRLGLER 321 (952)
Q Consensus 243 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~-L~~L~L~~N~l~~~~~~~~~~~~~L~~l~l~~~~~L~~L~L~~ 321 (952)
+| .+..+++|+.|+|++|+++ .+|.. +..+++ |++|+|++|+++ .+|..+...
T Consensus 588 lp-~~~~L~~L~~L~Ls~N~l~-~lp~~--l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~--------------------- 641 (876)
T 4ecn_A 588 LE-AFGTNVKLTDLKLDYNQIE-EIPED--FCAFTDQVEGLGFSHNKLK-YIPNIFNAK--------------------- 641 (876)
T ss_dssp CC-CCCTTSEESEEECCSSCCS-CCCTT--SCEECTTCCEEECCSSCCC-SCCSCCCTT---------------------
T ss_pred ch-hhcCCCcceEEECcCCccc-cchHH--HhhccccCCEEECcCCCCC-cCchhhhcc---------------------
Confidence 55 7888888889999888887 55543 677787 888999988888 455443221
Q ss_pred cceeechhhHHHHHHHhhccccccccCCCcccEEEccCCCCCCCCCccc---c--cCCCCcEEEccCccccCCCCccccC
Q 002214 322 NYLTFSTSELMSLFSALVNCKSLKIGNLINLTTLSLGDNNLSGSLPITL---G--RLKKLQGLDLQNNKFEGPIPQEFCH 396 (952)
Q Consensus 322 n~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l---~--~l~~L~~L~L~~N~i~~~~~~~~~~ 396 (952)
..++|+.|+|++|++++.+|... . .+++|+.|+|++|.|+.+.+..+..
T Consensus 642 --------------------------~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~ 695 (876)
T 4ecn_A 642 --------------------------SVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFAT 695 (876)
T ss_dssp --------------------------CSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHT
T ss_pred --------------------------ccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHcc
Confidence 12346666666666665444221 1 2346666666666666443334446
Q ss_pred CCcceEEEeccccccccCCCccCC--------CCCCcEEeccccccCCcCCcccc--CCCCCceeEecCCccCCCCchhh
Q 002214 397 FSRLYVVYLNRNKLSGSIPSCLGD--------LNSLRILSLSSNELTSVIPSTFW--NLEDILGFDFSSNSLNGSLPLEI 466 (952)
Q Consensus 397 l~~L~~L~L~~N~l~~~~~~~~~~--------l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~~~~~ 466 (952)
+++|+.|+|++|+|+ .+|..+.. +++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|++++ +|..+
T Consensus 696 l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l 772 (876)
T 4ecn_A 696 GSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQP 772 (876)
T ss_dssp TCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGG
T ss_pred CCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhh
Confidence 666666666666666 33333222 226777777777777 3455554 67777777777777775 56677
Q ss_pred hcccccceeecCC------cccCCCCcccccCCCCCceEEccCccccCcccccccccccccEEeCCCCcccccCccchhc
Q 002214 467 ENLKAVVDIYLSR------NNLSGNIPSTIIGLKNLQHLSLEHNKLQGPIPESFGELVSLEFLDLSNNDLSGVIPASLEK 540 (952)
Q Consensus 467 ~~l~~L~~L~Ls~------N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 540 (952)
..+++|+.|+|++ |++.+.+|..|..+++|+.|+|++|+|+ .+|..+. ++|+.|||++|++..+.+..+..
T Consensus 773 ~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L~-~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~ 849 (876)
T 4ecn_A 773 LNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDIR-KVDEKLT--PQLYILDIADNPNISIDVTSVCP 849 (876)
T ss_dssp GGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCCC-BCCSCCC--SSSCEEECCSCTTCEEECGGGHH
T ss_pred hcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCCC-ccCHhhc--CCCCEEECCCCCCCccChHHccc
Confidence 7777777777765 8888889999999999999999999994 6777665 68999999999998777777877
Q ss_pred cccccccccccccccc
Q 002214 541 LLYLKSLNLSFNKLVG 556 (952)
Q Consensus 541 l~~L~~L~l~~N~l~~ 556 (952)
...+..+.|.+|++..
T Consensus 850 ~~~~~~~~L~~n~~~~ 865 (876)
T 4ecn_A 850 YIEAGMYVLLYDKTQD 865 (876)
T ss_dssp HHHTTCCEEECCTTSE
T ss_pred cccchheeecCCCccc
Confidence 7777888888887653
No 13
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=6.9e-53 Score=451.53 Aligned_cols=265 Identities=25% Similarity=0.440 Sum_probs=219.0
Q ss_pred hccCCccceecCccceEEEEEEeC------CCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP------DGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKA 736 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 736 (952)
.++|.+.+.||+|+||+||+|++. +++.||||+++.......++|.+|++++++++|||||+++|+|.+++..+
T Consensus 12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 91 (299)
T 4asz_A 12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 91 (299)
T ss_dssp GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEE
Confidence 357888999999999999999863 47889999998766666788999999999999999999999999999999
Q ss_pred EEEEccCCCChhHHhhhcC------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEE
Q 002214 737 LVLEYMPKGSLEDCMYASN------------FNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAH 804 (952)
Q Consensus 737 lv~e~~~~g~L~~~l~~~~------------~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~k 804 (952)
+|||||++|+|.+++...+ ..++|.++..++.|||+||+|| |+++|+||||||+|||+++++.+|
T Consensus 92 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yL---H~~~iiHRDlKp~NILl~~~~~~K 168 (299)
T 4asz_A 92 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVK 168 (299)
T ss_dssp EEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECGGGCEE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCccCHhhEEECCCCcEE
Confidence 9999999999999997532 3699999999999999999999 689999999999999999999999
Q ss_pred EeccccccccCCcCcccc-cccccccccccccccCcCCcCcccchHhHHHHHHHHHh-CCCCCCccccCccchhhhhccc
Q 002214 805 LSDFGIAKLLSEEDSMKQ-TQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFT-GMKPTNEFFTGEMSIKRWINDS 882 (952)
Q Consensus 805 l~Dfgla~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~ 882 (952)
|+|||+|+.....+.... ....||+.|||||++.++.++.++|||||||++|||+| |+.||......+
T Consensus 169 i~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~---------- 238 (299)
T 4asz_A 169 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE---------- 238 (299)
T ss_dssp ECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH----------
T ss_pred ECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH----------
Confidence 999999987655443322 23568999999999999999999999999999999999 899986532111
Q ss_pred hhhhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHHhhhcc
Q 002214 883 LPAVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLLFANIE 950 (952)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~~~~~~ 950 (952)
+...+.... ....|..|++++.++|.+||+.||++||||+||.+.|+++.+....-++
T Consensus 239 ---~~~~i~~~~-------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~p~~ld 296 (299)
T 4asz_A 239 ---VIECITQGR-------VLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKASPVYLD 296 (299)
T ss_dssp ---HHHHHHHTC-------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCCCSC
T ss_pred ---HHHHHHcCC-------CCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcCCcccc
Confidence 111111000 0112456788999999999999999999999999999998765433333
No 14
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=5.3e-52 Score=451.04 Aligned_cols=258 Identities=24% Similarity=0.443 Sum_probs=209.5
Q ss_pred ccCCccceecCccceEEEEEEeC------CCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEE
Q 002214 664 DQFSEENLIGIGSYGSVYKGRFP------DGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKAL 737 (952)
Q Consensus 664 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 737 (952)
++|.+.++||+|+||+||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+++..|+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 46778899999999999999863 478999999987666667889999999999999999999999999999999
Q ss_pred EEEccCCCChhHHhhhcC--------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcE
Q 002214 738 VLEYMPKGSLEDCMYASN--------------FNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVA 803 (952)
Q Consensus 738 v~e~~~~g~L~~~l~~~~--------------~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~ 803 (952)
|||||++|+|.+++.... .+++|.+++.|+.|||+||+|| |+++||||||||+|||+++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yL---H~~~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHH---hcCCeecccccHhhEEECCCCcE
Confidence 999999999999987532 3589999999999999999999 68999999999999999999999
Q ss_pred EEeccccccccCCcCcc-cccccccccccccccccCcCCcCcccchHhHHHHHHHHHh-CCCCCCccccCccchhhhhcc
Q 002214 804 HLSDFGIAKLLSEEDSM-KQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFT-GMKPTNEFFTGEMSIKRWIND 881 (952)
Q Consensus 804 kl~Dfgla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~ 881 (952)
||+|||+|+.....+.. ......||+.|||||++.+..++.++|||||||++|||+| |+.||......+ .
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~--~------ 269 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE--A------ 269 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHH--H------
T ss_pred EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHH--H------
Confidence 99999999976544332 2234679999999999999999999999999999999999 899986532111 0
Q ss_pred chhhhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 002214 882 SLPAVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDL 944 (952)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~ 944 (952)
...+.... ....|..|++++.+||.+||+.||++||||+||+++|+.+.+.
T Consensus 270 -----~~~i~~g~-------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 270 -----IDCITQGR-------ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp -----HHHHHHTC-------CCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred -----HHHHHcCC-------CCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 01110000 0112456788999999999999999999999999999998764
No 15
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.7e-50 Score=482.13 Aligned_cols=510 Identities=20% Similarity=0.203 Sum_probs=344.1
Q ss_pred eEEEEEecCCCCcccCCccccCCcccCeeeccccccccccCCCcCCcCCCcEEeCcCCcccccCChhhcCCCCCCeEeec
Q 002214 34 RVTSLTISDLGLAGTIPSHLGNLSSLQTLVLSRNWFSGTIPKEIGNLTKLKELHLDYNKLQGEIPEELGNLAELEMLVLN 113 (952)
Q Consensus 34 ~~~~l~l~~~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~ 113 (952)
.++.|+++++.+++..+..+..+++|++|+|++|++++..|..|.++++|++|+|++|++.+..|.+|+++++|++|+++
T Consensus 29 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 108 (570)
T 2z63_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (570)
T ss_dssp SCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred cccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccccc
Confidence 45555555555554444555555555555555555554444455555555555555555554444555555555555555
Q ss_pred CccCccccCcccccccccccceeeccccccc-cCCCCCCCCCCccceEEcccCcccccCCccccCCCCC----cEEEccC
Q 002214 114 NNLLTGTIPASIFNLSFISTALDFSDNSLTG-SFPYDMCPGLPRLKGLYVSYNQFKGPIPNNLWHCKEL----SSVSLSY 188 (952)
Q Consensus 114 ~n~l~~~~p~~~~~l~~l~~~L~l~~n~l~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L----~~L~L~~ 188 (952)
+|++++..+..++++..+ +.|++++|.+++ .+|.. +.++++|++|++++|++++..+..+..+++| +.|++++
T Consensus 109 ~n~l~~l~~~~~~~l~~L-~~L~L~~n~l~~~~lp~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~ 186 (570)
T 2z63_A 109 ETNLASLENFPIGHLKTL-KELNVAHNLIQSFKLPEY-FSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 186 (570)
T ss_dssp TSCCCCSTTCSCTTCTTC-CEEECCSSCCCCCCCCGG-GGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTT
T ss_pred ccccccCCCccccccccc-cEEecCCCccceecChhh-hcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCC
Confidence 555552222234444433 455555555443 23322 2344555555555555544444444444444 4555555
Q ss_pred CcccccCCccccccCCccEEEeeCCcCC-ccCchhhhccCCCcEeeecccc------ccccCCccccCCC--CccEEEee
Q 002214 189 NQFTGRLPRDLGNSTKLKSLDLGFNNLN-GEIPQEIGNLRNLEILGIDQSN------LVGFVPDTIFNIS--TLKILSLF 259 (952)
Q Consensus 189 N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~n~------~~~~~~~~~~~l~--~L~~L~Ls 259 (952)
|.+++..|..|... +|+.|++++|... ...+..+..+++++.+.+.... +..+....+..+. +++.++++
T Consensus 187 n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~ 265 (570)
T 2z63_A 187 NPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLA 265 (570)
T ss_dssp CCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEE
T ss_pred CCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhh
Confidence 55554444444433 4555555554322 1233344444444444332211 1122222333332 24566777
Q ss_pred Cc-cccccCCCCcccCCCCCcceEEcccCcCCCCCCcccccchhhhhhhccccCccccccccCcceeechhhHHHHHHHh
Q 002214 260 NN-TLSGNLPSSKNLIGLPNLEGLNLGLNNLSGSIPSFFFNASKLYALELGYNSNLKRLGLERNYLTFSTSELMSLFSAL 338 (952)
Q Consensus 260 ~N-~l~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l~l~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~ 338 (952)
+| .+.+..+. .+..+++|++|++++|.+.+ +|..+..+ +|+.|++++|.+...+
T Consensus 266 ~~~~~~~~~~~--~~~~l~~L~~L~l~~~~l~~-l~~~~~~~------------~L~~L~l~~n~~~~l~---------- 320 (570)
T 2z63_A 266 YLDYYLDDIID--LFNCLTNVSSFSLVSVTIER-VKDFSYNF------------GWQHLELVNCKFGQFP---------- 320 (570)
T ss_dssp ETTEEESCSTT--TTGGGTTCSEEEEESCEECS-CCBCCSCC------------CCSEEEEESCBCSSCC----------
T ss_pred cchhhhhhchh--hhcCcCcccEEEecCccchh-hhhhhccC------------CccEEeeccCcccccC----------
Confidence 66 55555444 36778899999999999884 56555443 4555556666554332
Q ss_pred hccccccccCCCcccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCC--CccccCCCcceEEEeccccccccCCC
Q 002214 339 VNCKSLKIGNLINLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPI--PQEFCHFSRLYVVYLNRNKLSGSIPS 416 (952)
Q Consensus 339 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~ 416 (952)
...+++|+.|++++|.+.+..+. ..+++|++|++++|.+++.. +..+..+++|+.|++++|.+.+..+.
T Consensus 321 -------~~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~ 391 (570)
T 2z63_A 321 -------TLKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN 391 (570)
T ss_dssp -------BCBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE
T ss_pred -------cccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc
Confidence 24678999999999999866554 78999999999999998654 67888999999999999999965555
Q ss_pred ccCCCCCCcEEeccccccCCcCC-ccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccC-CCCcccccCCC
Q 002214 417 CLGDLNSLRILSLSSNELTSVIP-STFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLS-GNIPSTIIGLK 494 (952)
Q Consensus 417 ~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~ 494 (952)
+..+++|++|++++|++++..+ ..|..+++|+.|++++|.+.+..|..+.++++|+.|+|++|+++ +.+|..|..++
T Consensus 392 -~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~ 470 (570)
T 2z63_A 392 -FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELR 470 (570)
T ss_dssp -EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCT
T ss_pred -ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhccc
Confidence 8999999999999999998766 57899999999999999999989999999999999999999998 57889999999
Q ss_pred CCceEEccCccccCcccccccccccccEEeCCCCcccccCccchhcccccccccccccccccCCCCCCCc-ccccc--cc
Q 002214 495 NLQHLSLEHNKLQGPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFNKLVGEIPRGGAF-ANFSA--ES 571 (952)
Q Consensus 495 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-~~~~~--~~ 571 (952)
+|+.|+|++|++++..|..|..+++|+.|+|++|++++.+|..|..+++|+.|++++|+++|.+|....+ .++.. ..
T Consensus 471 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~wl~~~~~~ 550 (570)
T 2z63_A 471 NLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQK 550 (570)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHHHHHHHHHTGGG
T ss_pred CCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchHHHHHHHHhcccc
Confidence 9999999999999888999999999999999999999988889999999999999999999999975443 33332 22
Q ss_pred cccCccCCCCC
Q 002214 572 FIGNDLLCGSP 582 (952)
Q Consensus 572 ~~~n~~~c~~p 582 (952)
+.+.+ .|..|
T Consensus 551 ~~~~~-~C~~~ 560 (570)
T 2z63_A 551 EQGSA-KCSGS 560 (570)
T ss_dssp EESCC-BBTTT
T ss_pred CCCch-hhCCC
Confidence 34444 66655
No 16
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=2.1e-51 Score=439.58 Aligned_cols=262 Identities=26% Similarity=0.472 Sum_probs=208.3
Q ss_pred HhccCCccceecCccceEEEEEEeCCCcEEEEEEeeccC--chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEE
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQR--EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVL 739 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 739 (952)
..+++.+.++||+|+||+||+|++++ .||||+++... ....+.|.+|++++++++|||||+++|++.+ +..++||
T Consensus 34 ~~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVm 110 (307)
T 3omv_A 34 EASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT 110 (307)
T ss_dssp CTTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred cHHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEE
Confidence 45678899999999999999998743 69999986443 3445789999999999999999999998865 4689999
Q ss_pred EccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcCc
Q 002214 740 EYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEEDS 819 (952)
Q Consensus 740 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 819 (952)
|||++|+|.+++...+..+++.++..|+.|||+||+|| |+++||||||||+|||+++++.+||+|||+|+.......
T Consensus 111 Ey~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yL---H~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~ 187 (307)
T 3omv_A 111 QWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYL---HAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG 187 (307)
T ss_dssp ECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHH---HHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC------
T ss_pred EcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCccCCccCHHHEEECCCCcEEEeeccCceecccCCc
Confidence 99999999999988777899999999999999999999 688999999999999999999999999999987654322
Q ss_pred -ccccccccccccccccccCc---CCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhcccccc
Q 002214 820 -MKQTQTLATIGYIAPEYGRE---GQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLL 895 (952)
Q Consensus 820 -~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 895 (952)
......+||+.|||||++.+ +.|+.++|||||||++|||+||+.||........ ....+.. ....+..
T Consensus 188 ~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~-~~~~~~~------~~~~p~~- 259 (307)
T 3omv_A 188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ-IIFMVGR------GYASPDL- 259 (307)
T ss_dssp ------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH-HHHHHHT------TCCCCCS-
T ss_pred ceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHH-HHHHHhc------CCCCCCc-
Confidence 22344679999999998853 4689999999999999999999999965322111 1111000 0000000
Q ss_pred chhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 002214 896 SEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDL 944 (952)
Q Consensus 896 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~ 944 (952)
...+..|++++.++|.+||+.||++||||+||+++|+.++..
T Consensus 260 -------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~ 301 (307)
T 3omv_A 260 -------SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp -------TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred -------ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcc
Confidence 012346788999999999999999999999999999988654
No 17
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=2e-50 Score=479.02 Aligned_cols=502 Identities=19% Similarity=0.185 Sum_probs=382.1
Q ss_pred CCCCceEEEeCCCCeEEEEEecCCCCcccCCccccCCcccCeeeccccccccccCCCcCCcCCCcEEeCcCCcccccCCh
Q 002214 20 VCSWMGITCDVYGNRVTSLTISDLGLAGTIPSHLGNLSSLQTLVLSRNWFSGTIPKEIGNLTKLKELHLDYNKLQGEIPE 99 (952)
Q Consensus 20 ~c~w~~v~c~~~~~~~~~l~l~~~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~ 99 (952)
.|.|.|+ |+. ++++++ .+|+.+. ++|++|+|++|.+++..|..+..+++|++|+|++|++.+..|.
T Consensus 3 ~C~~~~~-c~~----------~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~ 68 (549)
T 2z81_A 3 SCDASGV-CDG----------RSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGD 68 (549)
T ss_dssp EECTTSE-EEC----------TTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTT
T ss_pred cCCCCce-EEC----------CCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChh
Confidence 5999998 865 344554 5676654 6888888888888877778888888888888888888877778
Q ss_pred hhcCCCCCCeEeecCccCccccCcccccccccccceeeccccccccCCCCCCCCCCccceEEcccCcc-cccCCccccCC
Q 002214 100 ELGNLAELEMLVLNNNLLTGTIPASIFNLSFISTALDFSDNSLTGSFPYDMCPGLPRLKGLYVSYNQF-KGPIPNNLWHC 178 (952)
Q Consensus 100 ~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~l~~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l-~~~~~~~l~~l 178 (952)
+|+++++|++|+|++|++++..|..+.++..+ +.|++++|.+++.-....+.++++|++|++++|++ ....+..|..+
T Consensus 69 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L-~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l 147 (549)
T 2z81_A 69 AFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSL-KYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGL 147 (549)
T ss_dssp TTTTCTTCCEEECTTSCCCSCCHHHHTTCTTC-CEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTC
T ss_pred hccccccCCEEECCCCccCccCHHHhccCCCC-cEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcc
Confidence 88888888888888888886555667777665 88888888887522224567888999999999984 43334678889
Q ss_pred CCCcEEEccCCcccccCCccccccCCccEEEeeCCcCCccCchhhhccCCCcEeeeccccccccC--C-ccccCCCCccE
Q 002214 179 KELSSVSLSYNQFTGRLPRDLGNSTKLKSLDLGFNNLNGEIPQEIGNLRNLEILGIDQSNLVGFV--P-DTIFNISTLKI 255 (952)
Q Consensus 179 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~~~~~~--~-~~~~~l~~L~~ 255 (952)
++|++|++++|++++..|..++.+++|++|++++|.+....+..+..+++|+.|++++|++.+.. + .....+++|+.
T Consensus 148 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~ 227 (549)
T 2z81_A 148 TSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKK 227 (549)
T ss_dssp CEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCE
T ss_pred cccCeeeccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccc
Confidence 99999999999998888888999999999999999887433333467889999999998888752 2 22345788999
Q ss_pred EEeeCccccccCCCC--cccCCCCCcceEEcccCcCCCCCCcccccchhhhhhhccccCccccccccCcceeechhhHHH
Q 002214 256 LSLFNNTLSGNLPSS--KNLIGLPNLEGLNLGLNNLSGSIPSFFFNASKLYALELGYNSNLKRLGLERNYLTFSTSELMS 333 (952)
Q Consensus 256 L~Ls~N~l~~~~~~~--~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l~l~~~~~L~~L~L~~n~l~~~~~~~~~ 333 (952)
|++++|.+++..+.. ..+..+++|+.+++++|.+.+...-. ....-.+....+++.+.+.++.+.....-
T Consensus 228 L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~-----~~~~~~~~~l~~L~~L~l~~~~i~~~~~~--- 299 (549)
T 2z81_A 228 LAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFN-----PSESDVVSELGKVETVTIRRLHIPQFYLF--- 299 (549)
T ss_dssp EEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCC-----CCTTTCCCCCTTCCEEEEESCBCSCGGGS---
T ss_pred eeccccccchhHHHHHHHHhhhhcccccccccccccccccccc-----ccchhhhhhhcccccccccccccchhhhc---
Confidence 999998876432211 12345678889999998887532211 00011123344555666655554321100
Q ss_pred HHHHhhccccccccCCCcccEEEccCCCCCCCCCccc-ccCCCCcEEEccCccccCCCC---ccccCCCcceEEEecccc
Q 002214 334 LFSALVNCKSLKIGNLINLTTLSLGDNNLSGSLPITL-GRLKKLQGLDLQNNKFEGPIP---QEFCHFSRLYVVYLNRNK 409 (952)
Q Consensus 334 ~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l-~~l~~L~~L~L~~N~i~~~~~---~~~~~l~~L~~L~L~~N~ 409 (952)
..+.. .+...++|+.|++++|+++ .+|..+ ..+++|++|++++|++.+..| ..+..+++|+.|+|++|+
T Consensus 300 -----~~l~~-~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~ 372 (549)
T 2z81_A 300 -----YDLST-VYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNH 372 (549)
T ss_dssp -----CCCCH-HHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSC
T ss_pred -----ccchh-hhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCc
Confidence 00000 0123568999999999998 455544 689999999999999987653 347889999999999999
Q ss_pred ccccCC--CccCCCCCCcEEeccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCc
Q 002214 410 LSGSIP--SCLGDLNSLRILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIP 487 (952)
Q Consensus 410 l~~~~~--~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 487 (952)
+++..+ ..+..+++|++|++++|++++ +|..+..+++|+.|++++|+++. +|..+ .++|+.|+|++|++++..
T Consensus 373 l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~--~~~L~~L~Ls~N~l~~~~- 447 (549)
T 2z81_A 373 LRSMQKTGEILLTLKNLTSLDISRNTFHP-MPDSCQWPEKMRFLNLSSTGIRV-VKTCI--PQTLEVLDVSNNNLDSFS- 447 (549)
T ss_dssp CCCHHHHHHHGGGCTTCCEEECTTCCCCC-CCSCCCCCTTCCEEECTTSCCSC-CCTTS--CTTCSEEECCSSCCSCCC-
T ss_pred ccccccchhhhhcCCCCCEEECCCCCCcc-CChhhcccccccEEECCCCCccc-ccchh--cCCceEEECCCCChhhhc-
Confidence 986543 568899999999999999984 67788899999999999999984 44433 268999999999999653
Q ss_pred ccccCCCCCceEEccCccccCcccccccccccccEEeCCCCcccccCccchhcccccccccccccccccCCCCC
Q 002214 488 STIIGLKNLQHLSLEHNKLQGPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFNKLVGEIPRG 561 (952)
Q Consensus 488 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~ 561 (952)
..+++|++|+|++|+|+ .+|. ...+++|+.|+|++|+|++.+|..+..+++|+.|++++|++.|.+|..
T Consensus 448 ---~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~ 516 (549)
T 2z81_A 448 ---LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 516 (549)
T ss_dssp ---CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHHHH
T ss_pred ---ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCccH
Confidence 57899999999999999 5665 567899999999999999999999999999999999999999999853
No 18
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.1e-51 Score=444.03 Aligned_cols=255 Identities=26% Similarity=0.450 Sum_probs=210.8
Q ss_pred ccCCccceecCccceEEEEEEe------CCCcEEEEEEeeccCc-hhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeE
Q 002214 664 DQFSEENLIGIGSYGSVYKGRF------PDGIEVAIKVFHLQRE-GALNSFDAECEILKTIRHRNLVKIISSCTNHNFKA 736 (952)
Q Consensus 664 ~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 736 (952)
.++++.+.||+|+||+||+|++ .+++.||||+++.... ...++|.+|+.++++++|||||+++|+|.+++..+
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~ 105 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS 105 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence 4567788999999999999986 2578999999965433 34578999999999999999999999999999999
Q ss_pred EEEEccCCCChhHHhhhcC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCC
Q 002214 737 LVLEYMPKGSLEDCMYASN---------------FNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSM 801 (952)
Q Consensus 737 lv~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~ 801 (952)
+|||||++|+|.+++.... ..++|.++..|+.|||+||+|| |+++||||||||+|||+++++
T Consensus 106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yL---H~~~iiHRDLK~~NILl~~~~ 182 (308)
T 4gt4_A 106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKL 182 (308)
T ss_dssp EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECGGG
T ss_pred EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHH---HhCCCCCCCccccceEECCCC
Confidence 9999999999999996432 3589999999999999999999 789999999999999999999
Q ss_pred cEEEeccccccccCCcCcc-cccccccccccccccccCcCCcCcccchHhHHHHHHHHHh-CCCCCCccccCccchhhhh
Q 002214 802 VAHLSDFGIAKLLSEEDSM-KQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFT-GMKPTNEFFTGEMSIKRWI 879 (952)
Q Consensus 802 ~~kl~Dfgla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~ 879 (952)
.+||+|||+|+.....+.. ..+...||++|||||++.++.++.++|||||||++|||+| |+.||...... .+
T Consensus 183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~--~~---- 256 (308)
T 4gt4_A 183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ--DV---- 256 (308)
T ss_dssp CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH--HH----
T ss_pred CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH--HH----
Confidence 9999999999876544332 2334679999999999999999999999999999999999 89998653211 11
Q ss_pred ccchhhhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 002214 880 NDSLPAVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKI 941 (952)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i 941 (952)
...+..... ...|..|++++.++|.+||+.||++||||+||+++|+.+
T Consensus 257 -------~~~i~~~~~-------~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 257 -------VEMIRNRQV-------LPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp -------HHHHHTTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred -------HHHHHcCCC-------CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 111111110 112456888999999999999999999999999999753
No 19
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=2.7e-50 Score=436.03 Aligned_cols=250 Identities=23% Similarity=0.322 Sum_probs=210.8
Q ss_pred ccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEEEcc
Q 002214 664 DQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVLEYM 742 (952)
Q Consensus 664 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 742 (952)
..|++.++||+|+||+||+|++. +|+.||||++........+.+.+|++++++++|||||++++++.+++..|+|||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 46999999999999999999984 79999999997666556677899999999999999999999999999999999999
Q ss_pred CCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcCcccc
Q 002214 743 PKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEEDSMKQ 822 (952)
Q Consensus 743 ~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 822 (952)
+||+|.+++... .+++.++..++.||+.||+|| |++||+||||||+|||++.++.+||+|||+|+.+..... ..
T Consensus 154 ~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~yl---H~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~-~~ 227 (346)
T 4fih_A 154 EGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVL---HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-RR 227 (346)
T ss_dssp TTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC-CB
T ss_pred CCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHH---HHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCC-cc
Confidence 999999998764 599999999999999999999 789999999999999999999999999999997754332 23
Q ss_pred cccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccchhhHHH
Q 002214 823 TQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSEDEEHA 902 (952)
Q Consensus 823 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 902 (952)
...+||+.|||||++.+..|+.++||||+||++|||++|+.||..... ...... +.+......
T Consensus 228 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--~~~~~~-------i~~~~~~~~-------- 290 (346)
T 4fih_A 228 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKM-------IRDNLPPRL-------- 290 (346)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHH-------HHHSSCCCC--------
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHHHHH-------HHcCCCCCC--------
Confidence 456899999999999999999999999999999999999999865211 111000 000000000
Q ss_pred HHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 903 NVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 903 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
..+..+++++.+|+.+||..||++|||++|+++|
T Consensus 291 -~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 291 -KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp -SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -CccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 0123467889999999999999999999999874
No 20
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.4e-50 Score=438.94 Aligned_cols=251 Identities=22% Similarity=0.323 Sum_probs=204.3
Q ss_pred hccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccC--chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQR--EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVL 739 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 739 (952)
.++|++.+.||+|+||+||+|++ .+|+.||||++.... ....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 36899999999999999999987 469999999997543 344578999999999999999999999999999999999
Q ss_pred EccCCCChhHHhhhcC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcC
Q 002214 740 EYMPKGSLEDCMYASN-FNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEED 818 (952)
Q Consensus 740 e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 818 (952)
|||+||+|.+++...+ ..+++.+++.++.||+.||+|| |++|||||||||+|||+++++.+||+|||+|+......
T Consensus 103 Ey~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~yl---H~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 179 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHV---HDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV 179 (350)
T ss_dssp ECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHH---HHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH
T ss_pred eCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeeccCCHHHEEECCCCCEEEcccccceeecCCc
Confidence 9999999999997644 3579999999999999999999 78999999999999999999999999999999764322
Q ss_pred cccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccchh
Q 002214 819 SMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSED 898 (952)
Q Consensus 819 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 898 (952)
......+||+.|||||++.+..|+.++||||+||++|||+||+.||...... ..+.+ +......
T Consensus 180 -~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~-~~~~~-----------i~~~~~~--- 243 (350)
T 4b9d_A 180 -ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMK-NLVLK-----------IISGSFP--- 243 (350)
T ss_dssp -HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHH-----------HHHTCCC---
T ss_pred -ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-HHHHH-----------HHcCCCC---
Confidence 1223467999999999999999999999999999999999999999652111 01111 1111100
Q ss_pred hHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 899 EEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 899 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
..+..+++++.+|+.+||+.||++|||++|++++
T Consensus 244 -----~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 244 -----PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp -----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred -----CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1123467889999999999999999999999875
No 21
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=7.1e-50 Score=431.56 Aligned_cols=257 Identities=22% Similarity=0.285 Sum_probs=211.7
Q ss_pred hccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEEEc
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVLEY 741 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 741 (952)
.+.|.+.++||+|+||+||+|++ .+|+.||||+++.+.. ..+|+.++++++|||||++++++.+++..|+||||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 35688889999999999999998 4699999999975432 24799999999999999999999999999999999
Q ss_pred cCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCC-cEEEeccccccccCCcCcc
Q 002214 742 MPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSM-VAHLSDFGIAKLLSEEDSM 820 (952)
Q Consensus 742 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~-~~kl~Dfgla~~~~~~~~~ 820 (952)
|+||+|.+++...+ .+++.++..++.||+.||+|| |+++||||||||+|||++.++ .+||+|||+|+.+......
T Consensus 132 ~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~yl---H~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~ 207 (336)
T 4g3f_A 132 LEGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYL---HTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 207 (336)
T ss_dssp CTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC------
T ss_pred cCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcc
Confidence 99999999997654 699999999999999999999 799999999999999999988 6999999999977543221
Q ss_pred ----cccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccc
Q 002214 821 ----KQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLS 896 (952)
Q Consensus 821 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 896 (952)
.....+||+.|||||++.+..|+.++|||||||++|||+||+.||......+. ..+......+
T Consensus 208 ~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~-~~~i~~~~~~------------ 274 (336)
T 4g3f_A 208 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL-CLKIASEPPP------------ 274 (336)
T ss_dssp ------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC-HHHHHHSCCG------------
T ss_pred cceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH-HHHHHcCCCC------------
Confidence 12235799999999999999999999999999999999999999976432221 1111111000
Q ss_pred hhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHHh
Q 002214 897 EDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLLF 946 (952)
Q Consensus 897 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~~ 946 (952)
....+..+++++.+++.+||+.||++|||+.|+++++....+...
T Consensus 275 -----~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~ 319 (336)
T 4g3f_A 275 -----IREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVG 319 (336)
T ss_dssp -----GGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred -----chhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhh
Confidence 001234578889999999999999999999999999988876653
No 22
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=2.3e-50 Score=441.47 Aligned_cols=269 Identities=21% Similarity=0.364 Sum_probs=220.9
Q ss_pred cCHHHHHHHhccCCccceecCccceEEEEEEeC------CCcEEEEEEeeccCc-hhhHHHHHHHHHHHhCCC-Ccccee
Q 002214 654 YSHDELLRATDQFSEENLIGIGSYGSVYKGRFP------DGIEVAIKVFHLQRE-GALNSFDAECEILKTIRH-RNLVKI 725 (952)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h-~niv~l 725 (952)
++.++++...++|++.+.||+|+||+||+|++. .++.||||+++.... ...+.|.+|++++++++| ||||++
T Consensus 54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l 133 (353)
T 4ase_A 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 133 (353)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence 455667777889999999999999999999863 246899999875443 345679999999999965 999999
Q ss_pred eeEeecC-CeeEEEEEccCCCChhHHhhhc---------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCC
Q 002214 726 ISSCTNH-NFKALVLEYMPKGSLEDCMYAS---------------NFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCD 789 (952)
Q Consensus 726 ~~~~~~~-~~~~lv~e~~~~g~L~~~l~~~---------------~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~D 789 (952)
+|+|.++ +..++|||||++|+|.++++.. ...+++.++..++.|||+||+|| |+++|||||
T Consensus 134 ~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yL---H~~~iiHRD 210 (353)
T 4ase_A 134 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRD 210 (353)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHH---HHTTCCCSC
T ss_pred EEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhH---hhCCeecCc
Confidence 9999764 5689999999999999999753 23589999999999999999999 789999999
Q ss_pred CCCCCeeeCCCCcEEEeccccccccCCcCcc-cccccccccccccccccCcCCcCcccchHhHHHHHHHHHh-CCCCCCc
Q 002214 790 IKPSNVLLDDSMVAHLSDFGIAKLLSEEDSM-KQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFT-GMKPTNE 867 (952)
Q Consensus 790 lk~~Nill~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~ 867 (952)
|||+|||+++++.+||+|||+|+........ ......||+.|||||++.+..|+.++|||||||++|||+| |+.||..
T Consensus 211 LK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~ 290 (353)
T 4ase_A 211 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 290 (353)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred cCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCC
Confidence 9999999999999999999999976544332 3344679999999999999999999999999999999998 9999966
Q ss_pred cccCccchhhhhccchhhhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 002214 868 FFTGEMSIKRWINDSLPAVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDL 944 (952)
Q Consensus 868 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~ 944 (952)
....+. +.+ .+.... ....|..+++++.++|.+||+.||++||||+||+++|+++.+.
T Consensus 291 ~~~~~~-~~~-----------~i~~g~-------~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 291 VKIDEE-FCR-----------RLKEGT-------RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp CCCSHH-HHH-----------HHHHTC-------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCHHHH-HHH-----------HHHcCC-------CCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 322211 111 111111 0112345788899999999999999999999999999998764
No 23
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.3e-49 Score=427.79 Aligned_cols=275 Identities=21% Similarity=0.307 Sum_probs=206.8
Q ss_pred ccCCccceecCccceEEEEEEeCCCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEeecCC----eeEEEE
Q 002214 664 DQFSEENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSCTNHN----FKALVL 739 (952)
Q Consensus 664 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~lv~ 739 (952)
.+|.+.+.||+|+||+||+|++ +|+.||||+++..... ...+..|+..+.+++|||||++++++.+++ ..|+||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 4577889999999999999998 6899999998654332 123345666667889999999999997653 579999
Q ss_pred EccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhc-----CCCCeEeCCCCCCCeeeCCCCcEEEecccccccc
Q 002214 740 EYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFG-----HSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLL 814 (952)
Q Consensus 740 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~-----h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~ 814 (952)
|||++|+|.+++... .+++..+.+++.|+++||+|||.. |+++|+||||||+|||+++++.+||+|||+|+..
T Consensus 81 Ey~~~gsL~~~l~~~--~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 81 DYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp ECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred cCCCCCcHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 999999999999765 489999999999999999999732 3569999999999999999999999999999876
Q ss_pred CCcCcc---cccccccccccccccccCcC------CcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhcc--ch
Q 002214 815 SEEDSM---KQTQTLATIGYIAPEYGREG------QVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWIND--SL 883 (952)
Q Consensus 815 ~~~~~~---~~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~--~~ 883 (952)
...... .....+||+.|||||++.+. .++.++|||||||++|||+||+.||.........+..+... ..
T Consensus 159 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~ 238 (303)
T 3hmm_A 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238 (303)
T ss_dssp ETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred cCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchH
Confidence 543322 22235799999999998654 46789999999999999999998876543333222222111 11
Q ss_pred hhhhh-hccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 002214 884 PAVMN-IMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDL 944 (952)
Q Consensus 884 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~ 944 (952)
..... +.........+. ......+++.+.++|.+||+.||++||||.||++.|+++.++
T Consensus 239 ~~~~~~~~~~~~rp~~p~--~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 239 EEMRKVVCEQKLRPNIPN--RWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp HHHHHHHTTSCCCCCCCG--GGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHhcccCCCCCCc--cccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 11111 111111111111 111234677899999999999999999999999999998765
No 24
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.6e-48 Score=462.56 Aligned_cols=496 Identities=19% Similarity=0.213 Sum_probs=403.9
Q ss_pred CcccCeeeccccccccccCCCcCCcCCCcEEeCcCCcccccCChhhcCCCCCCeEeecCccCccccCcccccccccccce
Q 002214 56 LSSLQTLVLSRNWFSGTIPKEIGNLTKLKELHLDYNKLQGEIPEELGNLAELEMLVLNNNLLTGTIPASIFNLSFISTAL 135 (952)
Q Consensus 56 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~l~~~L 135 (952)
|+...+.+.+++.++ .+|..+. ++|++|+|++|++++..|.+|+++++|++|+|++|++++..|..+.++..+ +.|
T Consensus 4 C~~~~~c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L-~~L 79 (549)
T 2z81_A 4 CDASGVCDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSL-EHL 79 (549)
T ss_dssp ECTTSEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTC-CEE
T ss_pred CCCCceEECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccC-CEE
Confidence 344455788899998 8888765 799999999999998888999999999999999999997777888888876 999
Q ss_pred eeccccccccCCCCCCCCCCccceEEcccCcccc-cCCccccCCCCCcEEEccCCc-ccccCCccccccCCccEEEeeCC
Q 002214 136 DFSDNSLTGSFPYDMCPGLPRLKGLYVSYNQFKG-PIPNNLWHCKELSSVSLSYNQ-FTGRLPRDLGNSTKLKSLDLGFN 213 (952)
Q Consensus 136 ~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~l~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~N 213 (952)
++++|++++ ++...+.++++|++|+|++|++++ ..|..+..+++|+.|++++|+ +....+..|+++++|++|++++|
T Consensus 80 ~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n 158 (549)
T 2z81_A 80 DLSDNHLSS-LSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKAL 158 (549)
T ss_dssp ECTTSCCCS-CCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEET
T ss_pred ECCCCccCc-cCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCC
Confidence 999999994 555556789999999999999986 357789999999999999998 55555578999999999999999
Q ss_pred cCCccCchhhhccCCCcEeeeccccccccCCccccCCCCccEEEeeCccccccCC-CCcccCCCCCcceEEcccCcCCCC
Q 002214 214 NLNGEIPQEIGNLRNLEILGIDQSNLVGFVPDTIFNISTLKILSLFNNTLSGNLP-SSKNLIGLPNLEGLNLGLNNLSGS 292 (952)
Q Consensus 214 ~l~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~l~~L~~L~L~~N~l~~~ 292 (952)
.+++..|..++.+++|+.|+++.|.+.......+..+++|++|++++|++++... .......+++|+.|++++|.+++.
T Consensus 159 ~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ 238 (549)
T 2z81_A 159 SLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDE 238 (549)
T ss_dssp TCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHH
T ss_pred cccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchh
Confidence 9999999999999999999999998866544445679999999999999986421 112234578999999999998765
Q ss_pred CCcccccchhhhhhhccccCccccccccCcceeechhhHHHHHHHhhccccccccCCCcccEEEccCCCCCCC-----CC
Q 002214 293 IPSFFFNASKLYALELGYNSNLKRLGLERNYLTFSTSELMSLFSALVNCKSLKIGNLINLTTLSLGDNNLSGS-----LP 367 (952)
Q Consensus 293 ~~~~~~~~~~L~~l~l~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~-----~~ 367 (952)
.+..+.. .+....+|+.+++++|.+...+.- .......+..+++|+.|++.++.+... .+
T Consensus 239 ~~~~l~~-------~~~~~~~L~~l~l~~~~~~~~~~~--------~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~ 303 (549)
T 2z81_A 239 SFNELLK-------LLRYILELSEVEFDDCTLNGLGDF--------NPSESDVVSELGKVETVTIRRLHIPQFYLFYDLS 303 (549)
T ss_dssp HHHHHHG-------GGGGCTTCCEEEEESCEEECCSCC--------CCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCC
T ss_pred HHHHHHH-------Hhhhhccccccccccccccccccc--------cccchhhhhhhcccccccccccccchhhhcccch
Confidence 4433221 134456777888887776543210 001112356788999999999988642 12
Q ss_pred cccccCCCCcEEEccCccccCCCCccc-cCCCcceEEEeccccccccCC---CccCCCCCCcEEeccccccCCcCC--cc
Q 002214 368 ITLGRLKKLQGLDLQNNKFEGPIPQEF-CHFSRLYVVYLNRNKLSGSIP---SCLGDLNSLRILSLSSNELTSVIP--ST 441 (952)
Q Consensus 368 ~~l~~l~~L~~L~L~~N~i~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~L~~N~l~~~~~--~~ 441 (952)
..+...++|++|++++|.+.. .|..+ .++++|++|+|++|++++.+| ..++.+++|++|++++|+++++.+ ..
T Consensus 304 ~~~~~~~~L~~L~l~~n~l~~-ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 382 (549)
T 2z81_A 304 TVYSLLEKVKRITVENSKVFL-VPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEI 382 (549)
T ss_dssp HHHHHSTTCCEEEEESSCCCC-CCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHH
T ss_pred hhhhhcccceEEEeccCcccc-CCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhh
Confidence 234456799999999999984 55554 689999999999999997663 457889999999999999997754 56
Q ss_pred ccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEccCccccCccccccccccccc
Q 002214 442 FWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNKLQGPIPESFGELVSLE 521 (952)
Q Consensus 442 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 521 (952)
+..+++|+.|++++|+++ .+|..+..+++|++|++++|+++. +|..+ .++|+.|+|++|+|++.+ ..+++|+
T Consensus 383 ~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~ 454 (549)
T 2z81_A 383 LLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV-VKTCI--PQTLEVLDVSNNNLDSFS----LFLPRLQ 454 (549)
T ss_dssp GGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSC-CCTTS--CTTCSEEECCSSCCSCCC----CCCTTCC
T ss_pred hhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCccc-ccchh--cCCceEEECCCCChhhhc----ccCChhc
Confidence 899999999999999999 688889999999999999999984 44433 268999999999999643 5789999
Q ss_pred EEeCCCCcccccCccchhcccccccccccccccccCCCC-CCCcccccccccccCccCCCCC
Q 002214 522 FLDLSNNDLSGVIPASLEKLLYLKSLNLSFNKLVGEIPR-GGAFANFSAESFIGNDLLCGSP 582 (952)
Q Consensus 522 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~~~~~~~~~~~n~~~c~~p 582 (952)
+|+|++|+|+ .+|. ...+++|+.|+|++|++++.+|. -..+..+....+.+|++.|+||
T Consensus 455 ~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 455 ELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp EEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred EEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 9999999998 5565 46799999999999999987775 2456777788899999999988
No 25
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=3.2e-49 Score=419.60 Aligned_cols=246 Identities=23% Similarity=0.379 Sum_probs=198.4
Q ss_pred CCccceecCccceEEEEEEe-CCCcEEEEEEeeccC--chhhHHHHHHHHHHHhCCCCccceeeeEeec----CCeeEEE
Q 002214 666 FSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQR--EGALNSFDAECEILKTIRHRNLVKIISSCTN----HNFKALV 738 (952)
Q Consensus 666 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv 738 (952)
|++.+.||+|+||+||+|.+ .+++.||+|++.... ....+.|.+|++++++++|||||++++++.+ ++..|+|
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv 107 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence 36677899999999999987 468999999986442 3345679999999999999999999999864 3568999
Q ss_pred EEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeCCCCCCCeeeC-CCCcEEEeccccccccC
Q 002214 739 LEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNP--IVHCDIKPSNVLLD-DSMVAHLSDFGIAKLLS 815 (952)
Q Consensus 739 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~--ivH~Dlk~~Nill~-~~~~~kl~Dfgla~~~~ 815 (952)
||||++|+|.+++.... .+++..+..++.||+.||+|| |+++ |+||||||+|||++ .++.+||+|||+|+...
T Consensus 108 mEy~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~yl---H~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 108 TELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFL---HTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp EECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred EeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence 99999999999997654 699999999999999999999 5666 99999999999998 47999999999998643
Q ss_pred CcCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhcccccc
Q 002214 816 EEDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLL 895 (952)
Q Consensus 816 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 895 (952)
.. .....+||+.|||||++.+ .++.++|||||||++|||+||+.||............ +.....
T Consensus 184 ~~---~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~------------i~~~~~ 247 (290)
T 3fpq_A 184 AS---FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRR------------VTSGVK 247 (290)
T ss_dssp TT---SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHH------------HTTTCC
T ss_pred CC---ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHH------------HHcCCC
Confidence 22 2334679999999998865 6999999999999999999999999652211111111 111100
Q ss_pred chhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 896 SEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 896 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
. ...+..+++++.+++.+||+.||++|||++|+++|
T Consensus 248 ~------~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 248 P------ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp C------GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred C------CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0 01123456789999999999999999999999874
No 26
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=4.8e-50 Score=427.36 Aligned_cols=248 Identities=23% Similarity=0.369 Sum_probs=209.0
Q ss_pred ccCCccceecCccceEEEEEEe-CCCcEEEEEEeecc---CchhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEE
Q 002214 664 DQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQ---REGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVL 739 (952)
Q Consensus 664 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 739 (952)
++|++.+.||+|+||+||+|++ .+|+.||||++... .....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5799999999999999999987 57999999999643 2334577999999999999999999999999999999999
Q ss_pred EccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcCc
Q 002214 740 EYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEEDS 819 (952)
Q Consensus 740 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 819 (952)
||++||+|.+++...+ .+++.++..++.||+.||+|| |++||+||||||+|||+++++.+||+|||+|+.+.....
T Consensus 112 Ey~~gG~L~~~i~~~~-~l~e~~~~~~~~qi~~al~yl---H~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYL---HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp CCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred ecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence 9999999999997654 699999999999999999999 789999999999999999999999999999998754332
Q ss_pred -ccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccchh
Q 002214 820 -MKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSED 898 (952)
Q Consensus 820 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 898 (952)
......+||+.|||||++.+..|+.++||||+||++|||+||+.||..... ...+.+ +.....
T Consensus 188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-~~~~~~-----------i~~~~~---- 251 (311)
T 4aw0_A 188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE-GLIFAK-----------IIKLEY---- 251 (311)
T ss_dssp CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHH-----------HHHTCC----
T ss_pred cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHH-----------HHcCCC----
Confidence 233456899999999999999999999999999999999999999965211 001111 111110
Q ss_pred hHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHH
Q 002214 899 EEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIIS 936 (952)
Q Consensus 899 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 936 (952)
..+..+++++.+|+.+||..||++|||+.|+.+
T Consensus 252 -----~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~ 284 (311)
T 4aw0_A 252 -----DFPEKFFPKARDLVEKLLVLDATKRLGCEEMEG 284 (311)
T ss_dssp -----CCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTC
T ss_pred -----CCCcccCHHHHHHHHHHccCCHhHCcChHHHcC
Confidence 012345778999999999999999999998754
No 27
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=4.1e-49 Score=437.33 Aligned_cols=250 Identities=23% Similarity=0.325 Sum_probs=211.0
Q ss_pred ccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEEEcc
Q 002214 664 DQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVLEYM 742 (952)
Q Consensus 664 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 742 (952)
+.|++.+.||+|+||.||+|++ .+|+.||||++........+.+.+|+.+|++++|||||++++++.+++..|+|||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 5699999999999999999998 469999999998766666678999999999999999999999999999999999999
Q ss_pred CCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcCcccc
Q 002214 743 PKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEEDSMKQ 822 (952)
Q Consensus 743 ~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 822 (952)
+||+|.+++... .+++.++..++.||+.||+|| |++|||||||||+|||++.+|.+||+|||+|+.+..... ..
T Consensus 231 ~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~yl---H~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~-~~ 304 (423)
T 4fie_A 231 EGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVL---HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-RR 304 (423)
T ss_dssp TTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC-CB
T ss_pred CCCcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHH---HHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCc-cc
Confidence 999999998754 499999999999999999999 789999999999999999999999999999997754332 33
Q ss_pred cccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccchhhHHH
Q 002214 823 TQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSEDEEHA 902 (952)
Q Consensus 823 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 902 (952)
...+||+.|||||++.+..|+.++|||||||++|||++|+.||..... ......+ ........
T Consensus 305 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--~~~~~~i-------~~~~~~~~-------- 367 (423)
T 4fie_A 305 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMI-------RDNLPPRL-------- 367 (423)
T ss_dssp CCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHH-------HHSCCCCC--------
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHHHHHH-------HcCCCCCC--------
Confidence 456899999999999999999999999999999999999999865211 1111100 00000000
Q ss_pred HHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 903 NVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 903 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
..+..+++++.+|+.+||..||++|||++|+++|
T Consensus 368 -~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 368 -KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp -SCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 0123457789999999999999999999999874
No 28
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.3e-49 Score=415.57 Aligned_cols=246 Identities=22% Similarity=0.371 Sum_probs=192.6
Q ss_pred ccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccC---chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEE
Q 002214 664 DQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQR---EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVL 739 (952)
Q Consensus 664 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 739 (952)
++|++.+.||+|+||+||+|++ .+|+.||||+++... ....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 6899999999999999999987 469999999986442 233567999999999999999999999999999999999
Q ss_pred EccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcCc
Q 002214 740 EYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEEDS 819 (952)
Q Consensus 740 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 819 (952)
||+ +|+|.+++...+ .+++.++..++.||+.||+|| |++||+||||||+|||+++++.+||+|||+|+......
T Consensus 93 Ey~-~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~yl---H~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~- 166 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYC---HRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN- 166 (275)
T ss_dssp ECC-CEEHHHHHHHSC-SCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred eCC-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCcccccCChHHeEECCCCCEEEeecCCCeecCCCC-
Confidence 999 679999887654 799999999999999999999 78999999999999999999999999999998764332
Q ss_pred ccccccccccccccccccCcCCc-CcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccchh
Q 002214 820 MKQTQTLATIGYIAPEYGREGQV-SIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSED 898 (952)
Q Consensus 820 ~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 898 (952)
.....+||+.|||||++.+..+ +.++||||+||++|||+||+.||.... ...... .+....
T Consensus 167 -~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~-----~~~~~~-------~i~~~~----- 228 (275)
T 3hyh_A 167 -FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES-----IPVLFK-------NISNGV----- 228 (275)
T ss_dssp ---------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHH-------HHHHTC-----
T ss_pred -ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC-----HHHHHH-------HHHcCC-----
Confidence 2234679999999999988775 579999999999999999999996521 111110 000000
Q ss_pred hHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 899 EEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 899 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
...+..+++++.+++.+||+.||++|||++|++++
T Consensus 229 ----~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 229 ----YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp ----CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred ----CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 01123467789999999999999999999999874
No 29
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-47 Score=457.38 Aligned_cols=466 Identities=20% Similarity=0.190 Sum_probs=381.2
Q ss_pred CeEEEEEecCCCCcccCCccccCCcccCeeeccccccccccCCCcCCcCCCcEEeCcCCcccccCChhhcCCCCCCeEee
Q 002214 33 NRVTSLTISDLGLAGTIPSHLGNLSSLQTLVLSRNWFSGTIPKEIGNLTKLKELHLDYNKLQGEIPEELGNLAELEMLVL 112 (952)
Q Consensus 33 ~~~~~l~l~~~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 112 (952)
.++++|+++++.+++..|..++++++|++|+|++|.+++..|..|+.+++|++|++++|++.+..+..++++++|++|+|
T Consensus 52 ~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 131 (570)
T 2z63_A 52 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 131 (570)
T ss_dssp SSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEEC
T ss_pred CCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCCCccccccccccEEec
Confidence 57899999999999877888999999999999999999877889999999999999999999655557999999999999
Q ss_pred cCccCcc-ccCcccccccccccceeeccccccccCCCCCCCCCCcc----ceEEcccCcccccCCccccCCCCCcEEEcc
Q 002214 113 NNNLLTG-TIPASIFNLSFISTALDFSDNSLTGSFPYDMCPGLPRL----KGLYVSYNQFKGPIPNNLWHCKELSSVSLS 187 (952)
Q Consensus 113 ~~n~l~~-~~p~~~~~l~~l~~~L~l~~n~l~~~~~~~~~~~l~~L----~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~ 187 (952)
++|.+++ .+|..+.+++.+ +.|++++|++++ ++...+..+++| ++|++++|.+++..|..+..+ +|+.|+++
T Consensus 132 ~~n~l~~~~lp~~~~~l~~L-~~L~l~~n~l~~-~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~ 208 (570)
T 2z63_A 132 AHNLIQSFKLPEYFSNLTNL-EHLDLSSNKIQS-IYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLR 208 (570)
T ss_dssp CSSCCCCCCCCGGGGGCTTC-CEEECTTSCCCE-ECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEE
T ss_pred CCCccceecChhhhcccCCC-CEEeCcCCccce-ecHHHccchhccchhhhhcccCCCCceecCHHHhccC-cceeEecc
Confidence 9999996 479999998876 999999999984 444445567777 899999999998888877766 89999999
Q ss_pred CCccc-ccCCccccccCCccEEEeeCCcC------CccCchhhhccCC--CcEeeeccc-cccccCCccccCCCCccEEE
Q 002214 188 YNQFT-GRLPRDLGNSTKLKSLDLGFNNL------NGEIPQEIGNLRN--LEILGIDQS-NLVGFVPDTIFNISTLKILS 257 (952)
Q Consensus 188 ~N~l~-~~~~~~~~~l~~L~~L~L~~N~l------~~~~p~~~~~l~~--L~~L~L~~n-~~~~~~~~~~~~l~~L~~L~ 257 (952)
+|... ...+..+.+++.++.+.+..+.+ .......+..+.+ ++.++++++ .+.+..++.+..+++|+.|+
T Consensus 209 ~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~ 288 (570)
T 2z63_A 209 NNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFS 288 (570)
T ss_dssp SCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEE
T ss_pred cccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEE
Confidence 98543 23455667777777766654322 2222333444443 456666666 66677777788888888888
Q ss_pred eeCccccccCCCCcccCCCCCcceEEcccCcCCCCCCcccccchhhhhhhccccCccccccccCcceeechhhHHHHHHH
Q 002214 258 LFNNTLSGNLPSSKNLIGLPNLEGLNLGLNNLSGSIPSFFFNASKLYALELGYNSNLKRLGLERNYLTFSTSELMSLFSA 337 (952)
Q Consensus 258 Ls~N~l~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l~l~~~~~L~~L~L~~n~l~~~~~~~~~~~~~ 337 (952)
+++|.+.+ +|.. +..+ +|++|++++|.+.. +|. ..+ .+|+.|++++|.+....
T Consensus 289 l~~~~l~~-l~~~--~~~~-~L~~L~l~~n~~~~-l~~--~~l-----------~~L~~L~l~~n~~~~~~--------- 341 (570)
T 2z63_A 289 LVSVTIER-VKDF--SYNF-GWQHLELVNCKFGQ-FPT--LKL-----------KSLKRLTFTSNKGGNAF--------- 341 (570)
T ss_dssp EESCEECS-CCBC--CSCC-CCSEEEEESCBCSS-CCB--CBC-----------SSCCEEEEESCBSCCBC---------
T ss_pred ecCccchh-hhhh--hccC-CccEEeeccCcccc-cCc--ccc-----------cccCEEeCcCCcccccc---------
Confidence 88888874 3332 4455 88888888888873 332 122 34555555555443211
Q ss_pred hhccccccccCCCcccEEEccCCCCCCCC--CcccccCCCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCC
Q 002214 338 LVNCKSLKIGNLINLTTLSLGDNNLSGSL--PITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIP 415 (952)
Q Consensus 338 ~~~~~~~~~~~l~~L~~L~L~~n~l~~~~--~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 415 (952)
....+++|++|++++|++++.. +..+..+++|++|++++|.+.+..+. |..+++|+.|++++|.+.+..+
T Consensus 342 -------~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~ 413 (570)
T 2z63_A 342 -------SEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSE 413 (570)
T ss_dssp -------CCCBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTT
T ss_pred -------ccccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccc
Confidence 1257889999999999998654 67889999999999999999866555 9999999999999999997766
Q ss_pred -CccCCCCCCcEEeccccccCCcCCccccCCCCCceeEecCCccC-CCCchhhhcccccceeecCCcccCCCCcccccCC
Q 002214 416 -SCLGDLNSLRILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLN-GSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGL 493 (952)
Q Consensus 416 -~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 493 (952)
..+..+++|++|++++|++++..+..|..+++|+.|++++|.++ +.+|..+..+++|+.|+|++|++++..|..|..+
T Consensus 414 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 493 (570)
T 2z63_A 414 FSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSL 493 (570)
T ss_dssp SCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTC
T ss_pred hhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcc
Confidence 57899999999999999999999999999999999999999997 5788999999999999999999999889999999
Q ss_pred CCCceEEccCccccCcccccccccccccEEeCCCCcccccCcc
Q 002214 494 KNLQHLSLEHNKLQGPIPESFGELVSLEFLDLSNNDLSGVIPA 536 (952)
Q Consensus 494 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 536 (952)
++|++|+|++|++++.+|..|..+++|+.|++++|++++..|.
T Consensus 494 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 494 SSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp TTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred cCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcc
Confidence 9999999999999988888899999999999999999987664
No 30
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=3.7e-48 Score=464.53 Aligned_cols=457 Identities=18% Similarity=0.233 Sum_probs=383.5
Q ss_pred cccCeeeccccccccccCCCcCCcCCCcEEeCcCCccc------c------cCChhhcCCCCCCeEeecCccCccccCcc
Q 002214 57 SSLQTLVLSRNWFSGTIPKEIGNLTKLKELHLDYNKLQ------G------EIPEELGNLAELEMLVLNNNLLTGTIPAS 124 (952)
Q Consensus 57 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~------~------~~p~~l~~l~~L~~L~L~~n~l~~~~p~~ 124 (952)
..++.|+|++|.++|.+|++++.|++|++|+|++|.+. + .+|... +..|+ +++++|.+.+.+|..
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~ 157 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPRED 157 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGG
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhh
Confidence 36788999999999999999999999999999999872 2 345444 56677 888888888888877
Q ss_pred cccccccccceeeccccccccCCCCCCCCCCccceEEcc--cCcccccCCccccCCCCCcEEEccCCccccc--------
Q 002214 125 IFNLSFISTALDFSDNSLTGSFPYDMCPGLPRLKGLYVS--YNQFKGPIPNNLWHCKELSSVSLSYNQFTGR-------- 194 (952)
Q Consensus 125 ~~~l~~l~~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~--~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~-------- 194 (952)
+..+...+..+++....+.. .....++.+.+. +|++++ +|..|+++++|++|+|++|++++.
T Consensus 158 ~~~~~~~l~~~~l~~~~~~~-------~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~ 229 (636)
T 4eco_A 158 FSDLIKDCINSDPQQKSIKK-------SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWEN 229 (636)
T ss_dssp SCHHHHHHHHHCTTSCCCCC-------CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSC
T ss_pred HHHHHHHHhhcCcccccccc-------ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccc
Confidence 76543322333433333221 122344544444 588998 899999999999999999999985
Q ss_pred ---------CCcccc--ccCCccEEEeeCCcCCccCchhhhccCCCcEeeecccc-ccc-cCCccccCC------CCccE
Q 002214 195 ---------LPRDLG--NSTKLKSLDLGFNNLNGEIPQEIGNLRNLEILGIDQSN-LVG-FVPDTIFNI------STLKI 255 (952)
Q Consensus 195 ---------~~~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~-~~~-~~~~~~~~l------~~L~~ 255 (952)
+|..++ ++++|++|+|++|.+.+.+|..|+++++|+.|++++|+ +.+ .+|..+..+ ++|++
T Consensus 230 ~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~ 309 (636)
T 4eco_A 230 ENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQI 309 (636)
T ss_dssp TTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCE
T ss_pred cccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCE
Confidence 899999 99999999999999999999999999999999999998 887 788888876 99999
Q ss_pred EEeeCccccccCCCCcccCCCCCcceEEcccCcCCCCCCcccccchhhhhhhccccCccccccccCcceeechhhHHHHH
Q 002214 256 LSLFNNTLSGNLPSSKNLIGLPNLEGLNLGLNNLSGSIPSFFFNASKLYALELGYNSNLKRLGLERNYLTFSTSELMSLF 335 (952)
Q Consensus 256 L~Ls~N~l~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l~l~~~~~L~~L~L~~n~l~~~~~~~~~~~ 335 (952)
|++++|+++ .+|....+..+++|++|++++|++++.+| .|
T Consensus 310 L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~-------------------------------------- 349 (636)
T 4eco_A 310 IYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AF-------------------------------------- 349 (636)
T ss_dssp EECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CC--------------------------------------
T ss_pred EECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hh--------------------------------------
Confidence 999999998 66652247889999999999999987666 33
Q ss_pred HHhhccccccccCCCcccEEEccCCCCCCCCCcccccCCC-CcEEEccCccccCCCCccccCCC--cceEEEeccccccc
Q 002214 336 SALVNCKSLKIGNLINLTTLSLGDNNLSGSLPITLGRLKK-LQGLDLQNNKFEGPIPQEFCHFS--RLYVVYLNRNKLSG 412 (952)
Q Consensus 336 ~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~-L~~L~L~~N~i~~~~~~~~~~l~--~L~~L~L~~N~l~~ 412 (952)
+.+++|++|++++|+++ .+|..+..+++ |++|++++|.++ ..|..+..+. +|+.|++++|++++
T Consensus 350 -----------~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~ 416 (636)
T 4eco_A 350 -----------GSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGS 416 (636)
T ss_dssp -----------EEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTT
T ss_pred -----------CCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCC
Confidence 45668899999999999 77888999999 999999999999 6788887765 99999999999999
Q ss_pred cCCCccC-------CCCCCcEEeccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcc-------cccceeecC
Q 002214 413 SIPSCLG-------DLNSLRILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENL-------KAVVDIYLS 478 (952)
Q Consensus 413 ~~~~~~~-------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l-------~~L~~L~Ls 478 (952)
..|..+. .+++|++|++++|+++++++..|..+++|+.|+|++|+++...+..+... ++|+.|+|+
T Consensus 417 ~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls 496 (636)
T 4eco_A 417 VDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLR 496 (636)
T ss_dssp TTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECC
T ss_pred cchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECc
Confidence 9999888 88899999999999998777778889999999999999994433444433 399999999
Q ss_pred CcccCCCCccccc--CCCCCceEEccCccccCcccccccccccccEEeC------CCCcccccCccchhccccccccccc
Q 002214 479 RNNLSGNIPSTII--GLKNLQHLSLEHNKLQGPIPESFGELVSLEFLDL------SNNDLSGVIPASLEKLLYLKSLNLS 550 (952)
Q Consensus 479 ~N~l~~~~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L------s~N~l~~~~~~~~~~l~~L~~L~l~ 550 (952)
+|+++ .+|..+. .+++|+.|+|++|+|++ +|..+..+++|+.|+| ++|++.+.+|..+..+++|+.|+|+
T Consensus 497 ~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls 574 (636)
T 4eco_A 497 FNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIG 574 (636)
T ss_dssp SSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECC
T ss_pred CCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECC
Confidence 99999 6777776 99999999999999997 8899999999999999 5688888999999999999999999
Q ss_pred ccccccCCCCCCCcccccccccccCccCCCC
Q 002214 551 FNKLVGEIPRGGAFANFSAESFIGNDLLCGS 581 (952)
Q Consensus 551 ~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~ 581 (952)
+|++ +.+|.. .+..+....+.+|++.|-.
T Consensus 575 ~N~l-~~ip~~-~~~~L~~L~Ls~N~l~~~~ 603 (636)
T 4eco_A 575 SNDI-RKVNEK-ITPNISVLDIKDNPNISID 603 (636)
T ss_dssp SSCC-CBCCSC-CCTTCCEEECCSCTTCEEE
T ss_pred CCcC-CccCHh-HhCcCCEEECcCCCCcccc
Confidence 9999 788875 4477888888999887743
No 31
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=9.3e-48 Score=452.54 Aligned_cols=463 Identities=19% Similarity=0.217 Sum_probs=331.6
Q ss_pred EEEEecCCCCcccCCccccCCcccCeeeccccccccccCCCcCCcCCCcEEeCcCCcccccCChhhcCCCCCCeEeecCc
Q 002214 36 TSLTISDLGLAGTIPSHLGNLSSLQTLVLSRNWFSGTIPKEIGNLTKLKELHLDYNKLQGEIPEELGNLAELEMLVLNNN 115 (952)
Q Consensus 36 ~~l~l~~~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n 115 (952)
++||+++++++ .+|..+. ++|++|+|++|.+++..|..|..+++|++|+|++|++.+..|.+|+++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 57888888888 6787776 88899999999888766678888889999999999888777888888899999999888
Q ss_pred cCccccCcccccccccccceeeccccccccCCCCCCCCCCccceEEcccCcccc-cCCccccCCCCCcEEEccCCccccc
Q 002214 116 LLTGTIPASIFNLSFISTALDFSDNSLTGSFPYDMCPGLPRLKGLYVSYNQFKG-PIPNNLWHCKELSSVSLSYNQFTGR 194 (952)
Q Consensus 116 ~l~~~~p~~~~~l~~l~~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~l~~l~~L~~L~L~~N~l~~~ 194 (952)
+++ .+|.. .+++|++|+|++|++++ .+|..|+.+++|++|++++|++++
T Consensus 80 ~l~-~lp~~----------------------------~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~- 129 (520)
T 2z7x_B 80 KLV-KISCH----------------------------PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK- 129 (520)
T ss_dssp CCC-EEECC----------------------------CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG-
T ss_pred cee-ecCcc----------------------------ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch-
Confidence 887 44443 34567777777777665 356667777777777777777664
Q ss_pred CCccccccCCc--cEEEeeCCcC--CccCchhhhccC-CCcEeeeccccccccCC-ccccCCCCccEEEeeCcc------
Q 002214 195 LPRDLGNSTKL--KSLDLGFNNL--NGEIPQEIGNLR-NLEILGIDQSNLVGFVP-DTIFNISTLKILSLFNNT------ 262 (952)
Q Consensus 195 ~~~~~~~l~~L--~~L~L~~N~l--~~~~p~~~~~l~-~L~~L~L~~n~~~~~~~-~~~~~l~~L~~L~Ls~N~------ 262 (952)
..++.+++| ++|++++|.+ .+..|..+..+. +...+++++|++.+..+ ..+..+++|+.|++++|.
T Consensus 130 --~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~ 207 (520)
T 2z7x_B 130 --SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCS 207 (520)
T ss_dssp --GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTH
T ss_pred --hhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccc
Confidence 345666666 7777777776 556666666655 23344556666555433 345566777777777765
Q ss_pred -ccccCCCCcccCCCCCcceEEcccCcCCCCCCcccccchhhhhhhccccCccccccccCccee-echhhHHHHHHHhhc
Q 002214 263 -LSGNLPSSKNLIGLPNLEGLNLGLNNLSGSIPSFFFNASKLYALELGYNSNLKRLGLERNYLT-FSTSELMSLFSALVN 340 (952)
Q Consensus 263 -l~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l~l~~~~~L~~L~L~~n~l~-~~~~~~~~~~~~~~~ 340 (952)
+.+.++ .+..+++|+.|++++|.+++..+..+.. .....+|+.|++++|.++ ..+..++
T Consensus 208 ~~~~~~~---~l~~l~~L~~L~l~~~~l~~~~~~~~~~--------~~~~~~L~~L~l~~n~l~~~~p~~~~-------- 268 (520)
T 2z7x_B 208 YFLSILA---KLQTNPKLSNLTLNNIETTWNSFIRILQ--------LVWHTTVWYFSISNVKLQGQLDFRDF-------- 268 (520)
T ss_dssp HHHHHHH---GGGGCTTCCEEEEEEEEEEHHHHHHHHH--------HHHTSSCSEEEEEEEEEESCCCCCCC--------
T ss_pred eeecchh---hhccccchhhccccccccCHHHHHHHHH--------HhhhCcccEEEeecccccCccccchh--------
Confidence 443333 2555666777777666665322111100 001235566666666555 3332210
Q ss_pred cccccccCCCcccEEEccCCCCCCCCCcccccC---CCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCc
Q 002214 341 CKSLKIGNLINLTTLSLGDNNLSGSLPITLGRL---KKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSC 417 (952)
Q Consensus 341 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l---~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 417 (952)
....+.+++|+.+++++|.+ ..+...+..+ ++|+.|++++|.+.... .+..+++|++|++++|++++..|..
T Consensus 269 --~~~~~~l~~L~~l~l~~n~~-~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~ 343 (520)
T 2z7x_B 269 --DYSGTSLKALSIHQVVSDVF-GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFEN 343 (520)
T ss_dssp --CCCSCCCCEEEEEEEEECCC-CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTT
T ss_pred --hcccccCceeEeccccccce-ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhh
Confidence 00126788888889988888 3333555554 67899999998876432 2367888999999999998888888
Q ss_pred cCCCCCCcEEeccccccCC--cCCccccCCCCCceeEecCCccCCCCch-hhhcccccceeecCCcccCCCCcccccCCC
Q 002214 418 LGDLNSLRILSLSSNELTS--VIPSTFWNLEDILGFDFSSNSLNGSLPL-EIENLKAVVDIYLSRNNLSGNIPSTIIGLK 494 (952)
Q Consensus 418 ~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 494 (952)
+..+++|++|++++|++++ ..|..|..+++|+.|++++|++++.+|. .+..+++|++|++++|++++..|..+. +
T Consensus 344 ~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~ 421 (520)
T 2z7x_B 344 CGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--P 421 (520)
T ss_dssp CCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--T
T ss_pred hccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--c
Confidence 8889999999999999986 3456788899999999999999874554 478888999999999999877766654 7
Q ss_pred CCceEEccCccccCcccccccccccccEEeCCCCcccccCccchhcccccccccccccccccCCCC
Q 002214 495 NLQHLSLEHNKLQGPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFNKLVGEIPR 560 (952)
Q Consensus 495 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~ 560 (952)
+|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|+++.+..+..+++|++|++++|+++|.++.
T Consensus 422 ~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 486 (520)
T 2z7x_B 422 RIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 486 (520)
T ss_dssp TCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred cCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccCCc
Confidence 8999999999998 6777777899999999999999854444588899999999999999988774
No 32
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=4.4e-49 Score=420.40 Aligned_cols=248 Identities=25% Similarity=0.319 Sum_probs=198.4
Q ss_pred ccCCccceecCccceEEEEEEe----CCCcEEEEEEeeccC--chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEE
Q 002214 664 DQFSEENLIGIGSYGSVYKGRF----PDGIEVAIKVFHLQR--EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKAL 737 (952)
Q Consensus 664 ~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 737 (952)
++|++.+.||+|+||+||+|+. .+++.||||+++... .....++.+|++++++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 5799999999999999999986 257899999986432 2234578899999999999999999999999999999
Q ss_pred EEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCc
Q 002214 738 VLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEE 817 (952)
Q Consensus 738 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 817 (952)
|||||+||+|.+++...+ .+++.++..++.|++.||+|| |++||+||||||+|||+++++.+||+|||+|+.....
T Consensus 104 vmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~yl---H~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 179 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHL---HSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179 (304)
T ss_dssp EECCCTTCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHH---HHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred EEEcCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCCcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence 999999999999997655 699999999999999999999 7899999999999999999999999999999865433
Q ss_pred CcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccch
Q 002214 818 DSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSE 897 (952)
Q Consensus 818 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 897 (952)
.. .....+||+.|||||++.+..++.++||||+||++|||+||+.||...... ..+.. +.....
T Consensus 180 ~~-~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~-~~~~~-----------i~~~~~--- 243 (304)
T 3ubd_A 180 EK-KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK-ETMTM-----------ILKAKL--- 243 (304)
T ss_dssp -C-CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHH-----------HHHCCC---
T ss_pred Cc-cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHH-HHHHH-----------HHcCCC---
Confidence 22 233467999999999999999999999999999999999999999652111 00111 111100
Q ss_pred hhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCH-----HHHHHH
Q 002214 898 DEEHANVAKQSCASSVLSLAMECTSESPENRVNT-----KEIISR 937 (952)
Q Consensus 898 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~ev~~~ 937 (952)
..+..+++++.+++.+||+.||++|||+ +|+++|
T Consensus 244 ------~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~H 282 (304)
T 3ubd_A 244 ------GMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH 282 (304)
T ss_dssp ------CCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred ------CCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence 1134467889999999999999999985 566653
No 33
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.5e-46 Score=454.39 Aligned_cols=490 Identities=22% Similarity=0.163 Sum_probs=303.5
Q ss_pred eEEEEEecCCCCcccCCccccCCcccCeeeccccccccccCCCcCCcCCCcEEeCcCCcccccCChhhcCCCCCCeEeec
Q 002214 34 RVTSLTISDLGLAGTIPSHLGNLSSLQTLVLSRNWFSGTIPKEIGNLTKLKELHLDYNKLQGEIPEELGNLAELEMLVLN 113 (952)
Q Consensus 34 ~~~~l~l~~~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~ 113 (952)
.+++|||++|.+++..|.+|..+++|++|+|++|+|++..|.+|.++++|++|+|++|++++..+.+|+++++|++|+|+
T Consensus 53 ~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls 132 (635)
T 4g8a_A 53 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 132 (635)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECT
T ss_pred CCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECC
Confidence 34555555555554334445555555555555555554334445555555555555555554333445555555555555
Q ss_pred CccCccccCcccccccccccceeeccccccccCCCCCCCCCCccceEEcccCcccccCCccccCCCCC----cEEEccCC
Q 002214 114 NNLLTGTIPASIFNLSFISTALDFSDNSLTGSFPYDMCPGLPRLKGLYVSYNQFKGPIPNNLWHCKEL----SSVSLSYN 189 (952)
Q Consensus 114 ~n~l~~~~p~~~~~l~~l~~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L----~~L~L~~N 189 (952)
+|++++..+..+.+++.+ +.|++++|++++.-....+..+++|++|+|++|++++..+..|..+.++ ..++++.|
T Consensus 133 ~N~l~~l~~~~~~~L~~L-~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n 211 (635)
T 4g8a_A 133 ETNLASLENFPIGHLKTL-KELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 211 (635)
T ss_dssp TSCCCCSTTCCCTTCTTC-CEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred CCcCCCCChhhhhcCccc-CeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccC
Confidence 555553333334444433 4555555555432222233344555555555555554444444433322 23445555
Q ss_pred cccccCCccccccCCccEEEeeCCcCCc-cCchhhhccCCCcEeeecccc------ccccCCcc----------------
Q 002214 190 QFTGRLPRDLGNSTKLKSLDLGFNNLNG-EIPQEIGNLRNLEILGIDQSN------LVGFVPDT---------------- 246 (952)
Q Consensus 190 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~n~------~~~~~~~~---------------- 246 (952)
.++...+..+. ...++.|++++|.... ..+..+..+..++...+..+. +.......
T Consensus 212 ~l~~i~~~~~~-~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~ 290 (635)
T 4g8a_A 212 PMNFIQPGAFK-EIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 290 (635)
T ss_dssp CCCEECTTTTT-TCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEEC
T ss_pred cccccCccccc-chhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhh
Confidence 55433333222 2234455555554331 223344555555554443211 11111222
Q ss_pred -----------ccCCCCccEEEeeCccccccCCCCcccCCCCCcceEEcccCcCCCCCCcccccchhhhhhhccccCccc
Q 002214 247 -----------IFNISTLKILSLFNNTLSGNLPSSKNLIGLPNLEGLNLGLNNLSGSIPSFFFNASKLYALELGYNSNLK 315 (952)
Q Consensus 247 -----------~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l~l~~~~~L~ 315 (952)
+..+.+++.+++.+|.+... ..+....+|+.|++.+|.+....+..+ ..|+
T Consensus 291 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~----~~~~~~~~L~~L~l~~~~~~~~~~~~l--------------~~L~ 352 (635)
T 4g8a_A 291 LDYYLDGIIDLFNCLTNVSSFSLVSVTIERV----KDFSYNFGWQHLELVNCKFGQFPTLKL--------------KSLK 352 (635)
T ss_dssp CCSCEEECTTTTGGGTTCSEEEEESCEEEEC----GGGGSCCCCSEEEEESCEESSCCCCBC--------------TTCC
T ss_pred hcccccchhhhhhhhcccccccccccccccc----cccccchhhhhhhcccccccCcCcccc--------------hhhh
Confidence 23344455555555555422 123344556666666666654433222 2344
Q ss_pred cccccCcceeechhhHHHHHHHhhccccccccCCCcccEEEccCCCCCC--CCCcccccCCCCcEEEccCccccCCCCcc
Q 002214 316 RLGLERNYLTFSTSELMSLFSALVNCKSLKIGNLINLTTLSLGDNNLSG--SLPITLGRLKKLQGLDLQNNKFEGPIPQE 393 (952)
Q Consensus 316 ~L~L~~n~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~--~~~~~l~~l~~L~~L~L~~N~i~~~~~~~ 393 (952)
.+.+..|.+.... ....+++|+.|++++|.+.. ..+..+..+.+|+.|+++.|.+.. .+..
T Consensus 353 ~l~l~~n~~~~~~----------------~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~ 415 (635)
T 4g8a_A 353 RLTFTSNKGGNAF----------------SEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSN 415 (635)
T ss_dssp EEEEESCCSCCBC----------------CCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSC
T ss_pred hcccccccCCCCc----------------ccccccccccchhhccccccccccccchhhhhhhhhhhcccccccc-cccc
Confidence 4444444433221 23467888999999988863 345566778889999999888874 4566
Q ss_pred ccCCCcceEEEeccccccccCC-CccCCCCCCcEEeccccccCCcCCccccCCCCCceeEecCCccC-CCCchhhhcccc
Q 002214 394 FCHFSRLYVVYLNRNKLSGSIP-SCLGDLNSLRILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLN-GSLPLEIENLKA 471 (952)
Q Consensus 394 ~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~ 471 (952)
|..+++|+.+++..|......+ ..|..+++++.+++++|++.+..+..+..++.|+.|++++|.+. ...|..|..+++
T Consensus 416 ~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~ 495 (635)
T 4g8a_A 416 FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRN 495 (635)
T ss_dssp CTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTT
T ss_pred ccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccc
Confidence 7888999999998887765443 56788889999999999998888888889999999999998754 456778888999
Q ss_pred cceeecCCcccCCCCcccccCCCCCceEEccCccccCcccccccccccccEEeCCCCcccccCccchhcc-ccccccccc
Q 002214 472 VVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNKLQGPIPESFGELVSLEFLDLSNNDLSGVIPASLEKL-LYLKSLNLS 550 (952)
Q Consensus 472 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l-~~L~~L~l~ 550 (952)
|+.|+|++|+|+++.|..|.++++|++|+|++|+|++..|..|..+++|++|||++|+|++..|..|..+ ++|+.|+|+
T Consensus 496 L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~ 575 (635)
T 4g8a_A 496 LTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLT 575 (635)
T ss_dssp CCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECT
T ss_pred cCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEee
Confidence 9999999999998888889999999999999999998888889999999999999999998888888887 579999999
Q ss_pred ccccccCCCC
Q 002214 551 FNKLVGEIPR 560 (952)
Q Consensus 551 ~N~l~~~~p~ 560 (952)
+|+|.|.|..
T Consensus 576 ~Np~~C~C~~ 585 (635)
T 4g8a_A 576 QNDFACTCEH 585 (635)
T ss_dssp TCCBCCSGGG
T ss_pred CCCCcccCCc
Confidence 9999988864
No 34
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.6e-45 Score=445.20 Aligned_cols=534 Identities=21% Similarity=0.211 Sum_probs=406.2
Q ss_pred CCceEEEeCCCCeEEEEEecCCCCcccCCccccCCcccCeeeccccccccccCCCcCCcCCCcEEeCcCCcccccCChhh
Q 002214 22 SWMGITCDVYGNRVTSLTISDLGLAGTIPSHLGNLSSLQTLVLSRNWFSGTIPKEIGNLTKLKELHLDYNKLQGEIPEEL 101 (952)
Q Consensus 22 ~w~~v~c~~~~~~~~~l~l~~~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l 101 (952)
.|..-.|.... ...+=++.+++ .+|..+. +++++|||++|+|++..|.+|.++++|++|+|++|+|++..|++|
T Consensus 23 ~~~~c~~~~~~---~~~~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f 96 (635)
T 4g8a_A 23 SWEPCVEVVPN---ITYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAY 96 (635)
T ss_dssp --CCSEEEETT---TEEECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTT
T ss_pred CCCCccccCCC---CEEECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHh
Confidence 45544444333 23355666776 6787664 489999999999997667789999999999999999998778899
Q ss_pred cCCCCCCeEeecCccCccccCcccccccccccceeeccccccccCCCCCCCCCCccceEEcccCcccc-cCCccccCCCC
Q 002214 102 GNLAELEMLVLNNNLLTGTIPASIFNLSFISTALDFSDNSLTGSFPYDMCPGLPRLKGLYVSYNQFKG-PIPNNLWHCKE 180 (952)
Q Consensus 102 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~l~~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~l~~l~~ 180 (952)
+++++|++|+|++|++++..+..|.+++.+ +.|++++|+++ .+|...+.++++|++|+|++|+++. ..|..+..+++
T Consensus 97 ~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L-~~L~Ls~N~l~-~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~ 174 (635)
T 4g8a_A 97 QSLSHLSTLILTGNPIQSLALGAFSGLSSL-QKLVAVETNLA-SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTN 174 (635)
T ss_dssp TTCTTCCEEECTTCCCCEECGGGGTTCTTC-CEEECTTSCCC-CSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTT
T ss_pred cCCCCCCEEEccCCcCCCCCHHHhcCCCCC-CEEECCCCcCC-CCChhhhhcCcccCeeccccCccccCCCchhhccchh
Confidence 999999999999999995444566777765 88999999988 5777778889999999999999875 45778888999
Q ss_pred CcEEEccCCcccccCCccccccCCcc----EEEeeCCcCCccCchhhhccCCCcEeeeccccccc-cCCccccCCCCccE
Q 002214 181 LSSVSLSYNQFTGRLPRDLGNSTKLK----SLDLGFNNLNGEIPQEIGNLRNLEILGIDQSNLVG-FVPDTIFNISTLKI 255 (952)
Q Consensus 181 L~~L~L~~N~l~~~~~~~~~~l~~L~----~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~~~~-~~~~~~~~l~~L~~ 255 (952)
|++|+|++|++++..+..|..+.+++ .++++.|.+....+.. .....++.|++.+|.... ..+..+..+..++.
T Consensus 175 L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~-~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~ 253 (635)
T 4g8a_A 175 LEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGA-FKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEV 253 (635)
T ss_dssp CCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTT-TTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEE
T ss_pred hhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCccc-ccchhhhhhhhhcccccccccchhhcCCccccc
Confidence 99999999999988888887776554 6888999988554444 444567778888765442 34455667777777
Q ss_pred EEeeCccccccC----CCCcccCCCCCcceEEcccCcCCC---CCCcccccchhhhhhh-----------ccccCccccc
Q 002214 256 LSLFNNTLSGNL----PSSKNLIGLPNLEGLNLGLNNLSG---SIPSFFFNASKLYALE-----------LGYNSNLKRL 317 (952)
Q Consensus 256 L~Ls~N~l~~~~----~~~~~l~~l~~L~~L~L~~N~l~~---~~~~~~~~~~~L~~l~-----------l~~~~~L~~L 317 (952)
..+..+...... .....+..+..+...++..+.... .....+....++..+. +.....++.|
T Consensus 254 ~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L 333 (635)
T 4g8a_A 254 HRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHL 333 (635)
T ss_dssp EEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEE
T ss_pred ccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcccccccccccccccccccccchhhhhh
Confidence 776544332110 011123333344444444433221 1122222233333222 2333456666
Q ss_pred cccCcceeechhhHHHHHHHhhccccccccCCCcccEEEccCCCCCCCCCcccccCCCCcEEEccCccccC--CCCcccc
Q 002214 318 GLERNYLTFSTSELMSLFSALVNCKSLKIGNLINLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEG--PIPQEFC 395 (952)
Q Consensus 318 ~L~~n~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~--~~~~~~~ 395 (952)
++..|.+...+ ...+..|+.+++.+|.+... .....+++|+.|++++|.+.. ..+..+.
T Consensus 334 ~l~~~~~~~~~-----------------~~~l~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~ 394 (635)
T 4g8a_A 334 ELVNCKFGQFP-----------------TLKLKSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQSDF 394 (635)
T ss_dssp EEESCEESSCC-----------------CCBCTTCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEECCHHHH
T ss_pred hcccccccCcC-----------------cccchhhhhcccccccCCCC--cccccccccccchhhccccccccccccchh
Confidence 66666554322 23567888899998887743 345678999999999999853 4566777
Q ss_pred CCCcceEEEeccccccccCCCccCCCCCCcEEeccccccCCcC-CccccCCCCCceeEecCCccCCCCchhhhcccccce
Q 002214 396 HFSRLYVVYLNRNKLSGSIPSCLGDLNSLRILSLSSNELTSVI-PSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVD 474 (952)
Q Consensus 396 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 474 (952)
.+.+|+.+++..|.+. ..+..+..+++|+.+++++|+..... ...|..+++++.++++.|.+.+..+..+..++.|+.
T Consensus 395 ~~~~L~~L~~~~~~~~-~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~ 473 (635)
T 4g8a_A 395 GTISLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEV 473 (635)
T ss_dssp SCSCCCEEECCSCSEE-EECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCE
T ss_pred hhhhhhhhhccccccc-cccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhh
Confidence 8899999999999988 45667889999999999998877654 457899999999999999999999999999999999
Q ss_pred eecCCcccC-CCCcccccCCCCCceEEccCccccCcccccccccccccEEeCCCCcccccCccchhcccccccccccccc
Q 002214 475 IYLSRNNLS-GNIPSTIIGLKNLQHLSLEHNKLQGPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFNK 553 (952)
Q Consensus 475 L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~ 553 (952)
|+|++|++. ...|..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++.+|..|.++++|+.|+|++|+
T Consensus 474 L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~ 553 (635)
T 4g8a_A 474 LKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNH 553 (635)
T ss_dssp EECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSC
T ss_pred hhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCc
Confidence 999999854 4678899999999999999999999889999999999999999999999999999999999999999999
Q ss_pred cccCCCCCC-Cc-ccccccccccCccCCCCCcc
Q 002214 554 LVGEIPRGG-AF-ANFSAESFIGNDLLCGSPYL 584 (952)
Q Consensus 554 l~~~~p~~~-~~-~~~~~~~~~~n~~~c~~p~~ 584 (952)
+++..|..- .+ .++....+.+|||.|+|...
T Consensus 554 l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~~ 586 (635)
T 4g8a_A 554 IMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQ 586 (635)
T ss_dssp CCBCCSSCTTCCCTTCCEEECTTCCBCCSGGGH
T ss_pred CCCCCHHHHHhhhCcCCEEEeeCCCCcccCCcH
Confidence 999888642 22 56777889999999999843
No 35
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=3.2e-47 Score=408.47 Aligned_cols=249 Identities=22% Similarity=0.380 Sum_probs=189.3
Q ss_pred ccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccCc-hhhHHHHHHHHHHHhCCCCccceeeeEeecCC--------
Q 002214 664 DQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQRE-GALNSFDAECEILKTIRHRNLVKIISSCTNHN-------- 733 (952)
Q Consensus 664 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-------- 733 (952)
++|++.+.||+|+||+||+|++ .+|+.||||+++.... ...+.+.+|++++++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 4699999999999999999987 4799999999875543 34567899999999999999999999986543
Q ss_pred ----eeEEEEEccCCCChhHHhhhcCC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEec
Q 002214 734 ----FKALVLEYMPKGSLEDCMYASNF--NLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSD 807 (952)
Q Consensus 734 ----~~~lv~e~~~~g~L~~~l~~~~~--~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~D 807 (952)
..|+||||+++|+|.+++..... ..++..++.++.||++||+|| |++||+||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~yl---H~~~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFL---HSKGLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHH---HHCcCccccCcHHHeEECCCCcEEEcc
Confidence 36899999999999999976542 356677899999999999999 789999999999999999999999999
Q ss_pred cccccccCCcCcc-----------cccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchh
Q 002214 808 FGIAKLLSEEDSM-----------KQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIK 876 (952)
Q Consensus 808 fgla~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~ 876 (952)
||+|+........ ..+..+||+.|||||++.+..|+.++|||||||++|||++ ||...... ..
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~---~~ 235 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMER---VR 235 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHH---HH
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHH---HH
Confidence 9999876543221 1223579999999999999999999999999999999996 76431100 00
Q ss_pred hhhccchhhhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 877 RWINDSLPAVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
.......... +......+++..+++.+||+.||++|||+.|++++
T Consensus 236 --------~~~~~~~~~~--------p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 236 --------TLTDVRNLKF--------PPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp --------HHHHHHTTCC--------CHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred --------HHHHHhcCCC--------CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 0111111000 00112234567889999999999999999999873
No 36
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=5.9e-46 Score=437.21 Aligned_cols=458 Identities=19% Similarity=0.220 Sum_probs=379.9
Q ss_pred CeeeccccccccccCCCcCCcCCCcEEeCcCCcccccCChhhcCCCCCCeEeecCccCccccCcccccccccccceeecc
Q 002214 60 QTLVLSRNWFSGTIPKEIGNLTKLKELHLDYNKLQGEIPEELGNLAELEMLVLNNNLLTGTIPASIFNLSFISTALDFSD 139 (952)
Q Consensus 60 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~l~~~L~l~~ 139 (952)
++||+++|.++ .+|..+. ++|++|+|++|++.+..|.+|+++++|++|+|++|++++..|..+.
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~------------- 66 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFK------------- 66 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGT-------------
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhh-------------
Confidence 57999999999 7888776 8999999999999977778999999999999999999955555543
Q ss_pred ccccccCCCCCCCCCCccceEEcccCcccccCCccccCCCCCcEEEccCCcccc-cCCccccccCCccEEEeeCCcCCcc
Q 002214 140 NSLTGSFPYDMCPGLPRLKGLYVSYNQFKGPIPNNLWHCKELSSVSLSYNQFTG-RLPRDLGNSTKLKSLDLGFNNLNGE 218 (952)
Q Consensus 140 n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~ 218 (952)
++++|++|+|++|+++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|+|++|.+++
T Consensus 67 -------------~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~- 129 (520)
T 2z7x_B 67 -------------FNQELEYLDLSHNKLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK- 129 (520)
T ss_dssp -------------TCTTCCEEECCSSCCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG-
T ss_pred -------------cccCCCEEecCCCcee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch-
Confidence 5678999999999998 46665 89999999999999997 468999999999999999999985
Q ss_pred CchhhhccCCC--cEeeeccccc--cccCCccccCCC-CccEEEeeCccccccCCCCcccCCCCCcceEEcccCc-----
Q 002214 219 IPQEIGNLRNL--EILGIDQSNL--VGFVPDTIFNIS-TLKILSLFNNTLSGNLPSSKNLIGLPNLEGLNLGLNN----- 288 (952)
Q Consensus 219 ~p~~~~~l~~L--~~L~L~~n~~--~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~l~~l~~L~~L~L~~N~----- 288 (952)
..+..+++| +.|++++|++ .+..|..+..++ +...+++++|.+.+.++. ..+..+++|+.|++++|.
T Consensus 130 --~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~-~~~~~l~~L~~L~l~~n~~~~~~ 206 (520)
T 2z7x_B 130 --SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILD-VSVKTVANLELSNIKCVLEDNKC 206 (520)
T ss_dssp --GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCC-CCCTTCSEEEECCEEECCSTTTT
T ss_pred --hhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhh-hhhhcccceeecccccccccccc
Confidence 467888888 9999999999 788888888766 455678889998876554 357789999999999997
Q ss_pred --CCCCCCcccccchhhhhhhccccCccccccccCcceeechhhHHHHHHHhhccccccccCCCcccEEEccCCCCCCCC
Q 002214 289 --LSGSIPSFFFNASKLYALELGYNSNLKRLGLERNYLTFSTSELMSLFSALVNCKSLKIGNLINLTTLSLGDNNLSGSL 366 (952)
Q Consensus 289 --l~~~~~~~~~~~~~L~~l~l~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 366 (952)
+.+.++ .+....+|+.|+++.|.+...... ..... ...++|++|++++|++++.+
T Consensus 207 ~~~~~~~~------------~l~~l~~L~~L~l~~~~l~~~~~~--~~~~~---------~~~~~L~~L~l~~n~l~~~~ 263 (520)
T 2z7x_B 207 SYFLSILA------------KLQTNPKLSNLTLNNIETTWNSFI--RILQL---------VWHTTVWYFSISNVKLQGQL 263 (520)
T ss_dssp HHHHHHHH------------GGGGCTTCCEEEEEEEEEEHHHHH--HHHHH---------HHTSSCSEEEEEEEEEESCC
T ss_pred ceeecchh------------hhccccchhhccccccccCHHHHH--HHHHH---------hhhCcccEEEeecccccCcc
Confidence 333222 344556777777777776532211 11110 12458999999999999888
Q ss_pred Cccc-----ccCCCCcEEEccCccccCCCCccccCC---CcceEEEeccccccccCCCccCCCCCCcEEeccccccCCcC
Q 002214 367 PITL-----GRLKKLQGLDLQNNKFEGPIPQEFCHF---SRLYVVYLNRNKLSGSIPSCLGDLNSLRILSLSSNELTSVI 438 (952)
Q Consensus 367 ~~~l-----~~l~~L~~L~L~~N~i~~~~~~~~~~l---~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 438 (952)
|..+ ..+++|+.+++++|.+ ......+..+ .+|+.|++++|.+.... .+..+++|++|++++|++++..
T Consensus 264 p~~~~~~~~~~l~~L~~l~l~~n~~-~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~ 340 (520)
T 2z7x_B 264 DFRDFDYSGTSLKALSIHQVVSDVF-GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTV 340 (520)
T ss_dssp CCCCCCCCSCCCCEEEEEEEEECCC-CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTT
T ss_pred ccchhhcccccCceeEeccccccce-ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhh
Confidence 8888 8999999999999999 3433555555 67999999999987432 2368999999999999999989
Q ss_pred CccccCCCCCceeEecCCccCC--CCchhhhcccccceeecCCcccCCCCc-ccccCCCCCceEEccCccccCccccccc
Q 002214 439 PSTFWNLEDILGFDFSSNSLNG--SLPLEIENLKAVVDIYLSRNNLSGNIP-STIIGLKNLQHLSLEHNKLQGPIPESFG 515 (952)
Q Consensus 439 ~~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 515 (952)
|..+..+++|+.|++++|++++ ..|..+..+++|++|+|++|++++.+| ..+..+++|++|+|++|++++..|..+.
T Consensus 341 ~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~ 420 (520)
T 2z7x_B 341 FENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP 420 (520)
T ss_dssp TTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC
T ss_pred hhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc
Confidence 9999999999999999999996 456789999999999999999998455 4589999999999999999887777664
Q ss_pred ccccccEEeCCCCcccccCccchhcccccccccccccccccCCCCC--CCcccccccccccCccCCCCCc
Q 002214 516 ELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFNKLVGEIPRG--GAFANFSAESFIGNDLLCGSPY 583 (952)
Q Consensus 516 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~~~~~~~~~~n~~~c~~p~ 583 (952)
++|+.|+|++|+|+ .+|..+..+++|+.|++++|+++. +|.. ..+.++....+.+|++.|+|+.
T Consensus 421 --~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 486 (520)
T 2z7x_B 421 --PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCPR 486 (520)
T ss_dssp --TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred --ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCc-cCHHHhccCCcccEEECcCCCCcccCCc
Confidence 79999999999999 678777799999999999999995 5543 4456677788999999998874
No 37
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=5.8e-46 Score=451.50 Aligned_cols=463 Identities=19% Similarity=0.212 Sum_probs=353.6
Q ss_pred cccCeeeccccccccccCCCcCCcCCCcEEeC-cCCcccccCChhhcCC-CCCCeEe---e------------cCccCcc
Q 002214 57 SSLQTLVLSRNWFSGTIPKEIGNLTKLKELHL-DYNKLQGEIPEELGNL-AELEMLV---L------------NNNLLTG 119 (952)
Q Consensus 57 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L-~~n~l~~~~p~~l~~l-~~L~~L~---L------------~~n~l~~ 119 (952)
..++.|+|++|.+.|.+|++|+.|++|++|+| ++|.+.|..|-..... ..+.... + ....+.+
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 46788999999999999999999999999999 8888876533221111 0000000 0 0000000
Q ss_pred ccCccc-----------ccccccccceee--ccccccccCCCCCCCCCCccceEEcccCcccc-----------------
Q 002214 120 TIPASI-----------FNLSFISTALDF--SDNSLTGSFPYDMCPGLPRLKGLYVSYNQFKG----------------- 169 (952)
Q Consensus 120 ~~p~~~-----------~~l~~l~~~L~l--~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~----------------- 169 (952)
.++..+ .+... ++.+.+ .+|++++ +|.. +.++++|++|+|++|++++
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~-l~~l~l~~~~N~L~~-IP~~-l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g 479 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRIS-LKDTQIGNLTNRITF-ISKA-IQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQ 479 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCC-CCTTTTTCCSCEEEE-ECGG-GGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHH
T ss_pred HHHHHhhhCccccccccccccc-hhhceeccccCcccc-hhHH-HhcCCCCCEEECcCCcCCCCcccccccccccccccc
Confidence 000000 00000 122222 3477776 7765 4578888888888888887
Q ss_pred cCCcccc--CCCCCcEEEccCCcccccCCccccccCCccEEEeeCCc-CCc-cCchhhhccC-------CCcEeeecccc
Q 002214 170 PIPNNLW--HCKELSSVSLSYNQFTGRLPRDLGNSTKLKSLDLGFNN-LNG-EIPQEIGNLR-------NLEILGIDQSN 238 (952)
Q Consensus 170 ~~~~~l~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~-~~p~~~~~l~-------~L~~L~L~~n~ 238 (952)
.+|..++ ++++|+.|+|++|.+.+.+|..|+++++|++|+|++|+ +++ .+|..++.++ +|+.|+|++|+
T Consensus 480 ~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~ 559 (876)
T 4ecn_A 480 YENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNN 559 (876)
T ss_dssp HTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSC
T ss_pred cCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCc
Confidence 3888887 99999999999999999999999999999999999998 887 7888888776 99999999999
Q ss_pred ccccCCc--cccCCCCccEEEeeCccccccCCCCcccCCCCCcceEEcccCcCCCCCCcccccchhhhhhhccccCcccc
Q 002214 239 LVGFVPD--TIFNISTLKILSLFNNTLSGNLPSSKNLIGLPNLEGLNLGLNNLSGSIPSFFFNASKLYALELGYNSNLKR 316 (952)
Q Consensus 239 ~~~~~~~--~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l~l~~~~~L~~ 316 (952)
+. .+|. .+.++++|+.|+|++|+++ .+| .+..+++|++|+|++|++. .+|..
T Consensus 560 L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp---~~~~L~~L~~L~Ls~N~l~-~lp~~-------------------- 613 (876)
T 4ecn_A 560 LE-EFPASASLQKMVKLGLLDCVHNKVR-HLE---AFGTNVKLTDLKLDYNQIE-EIPED-------------------- 613 (876)
T ss_dssp CC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC---CCCTTSEESEEECCSSCCS-CCCTT--------------------
T ss_pred CC-ccCChhhhhcCCCCCEEECCCCCcc-cch---hhcCCCcceEEECcCCccc-cchHH--------------------
Confidence 98 6677 8899999999999999998 556 4788899999999999988 45543
Q ss_pred ccccCcceeechhhHHHHHHHhhccccccccCCCc-ccEEEccCCCCCCCCCcccccCCC--CcEEEccCccccCCCCcc
Q 002214 317 LGLERNYLTFSTSELMSLFSALVNCKSLKIGNLIN-LTTLSLGDNNLSGSLPITLGRLKK--LQGLDLQNNKFEGPIPQE 393 (952)
Q Consensus 317 L~L~~n~l~~~~~~~~~~~~~~~~~~~~~~~~l~~-L~~L~L~~n~l~~~~~~~l~~l~~--L~~L~L~~N~i~~~~~~~ 393 (952)
+..+++ |+.|+|++|+++ .+|..+..++. |+.|+|++|++.+..|..
T Consensus 614 -----------------------------l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l 663 (876)
T 4ecn_A 614 -----------------------------FCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNI 663 (876)
T ss_dssp -----------------------------SCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSC
T ss_pred -----------------------------HhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccc
Confidence 345667 999999999999 67888877654 999999999998766643
Q ss_pred cc-----CCCcceEEEeccccccccCCCccCCCCCCcEEeccccccCCcCCccccCC-------CCCceeEecCCccCCC
Q 002214 394 FC-----HFSRLYVVYLNRNKLSGSIPSCLGDLNSLRILSLSSNELTSVIPSTFWNL-------EDILGFDFSSNSLNGS 461 (952)
Q Consensus 394 ~~-----~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l-------~~L~~L~Ls~N~l~~~ 461 (952)
.+ .+++|+.|+|++|+++...+..+..+++|+.|+|++|+|+.+++..+... ++|+.|+|++|+|+ .
T Consensus 664 ~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~ 742 (876)
T 4ecn_A 664 SCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-S 742 (876)
T ss_dssp SSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-C
T ss_pred hhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCCccChHHhccccccccccCCccEEECCCCCCc-c
Confidence 32 34589999999999994444445589999999999999996666555543 39999999999999 6
Q ss_pred Cchhhh--cccccceeecCCcccCCCCcccccCCCCCceEEccC------ccccCcccccccccccccEEeCCCCccccc
Q 002214 462 LPLEIE--NLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEH------NKLQGPIPESFGELVSLEFLDLSNNDLSGV 533 (952)
Q Consensus 462 ~~~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~------N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 533 (952)
+|..+. .+++|+.|+|++|+|++ +|..+..+++|+.|+|++ |++.+.+|..|..+++|+.|+|++|+| +.
T Consensus 743 lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~ 820 (876)
T 4ecn_A 743 LSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RK 820 (876)
T ss_dssp CCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CB
T ss_pred chHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-Cc
Confidence 888887 99999999999999997 788899999999999977 888889999999999999999999999 57
Q ss_pred CccchhcccccccccccccccccCCCCCCC-cccccccccccCccCC--CCCc
Q 002214 534 IPASLEKLLYLKSLNLSFNKLVGEIPRGGA-FANFSAESFIGNDLLC--GSPY 583 (952)
Q Consensus 534 ~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~-~~~~~~~~~~~n~~~c--~~p~ 583 (952)
+|..+. ++|+.|+|++|++....+.... ........+.+|+..+ +||.
T Consensus 821 Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~~~I~gC~~ 871 (876)
T 4ecn_A 821 VDEKLT--PQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQDIRGCDA 871 (876)
T ss_dssp CCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHTTCCEEECCTTSEEESCGG
T ss_pred cCHhhc--CCCCEEECCCCCCCccChHHccccccchheeecCCCccccCCCCC
Confidence 777765 6999999999999765443110 0112233345555544 6663
No 38
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=5.9e-45 Score=432.25 Aligned_cols=462 Identities=20% Similarity=0.202 Sum_probs=304.4
Q ss_pred EEEEecCCCCcccCCccccCCcccCeeeccccccccccCCCcCCcCCCcEEeCcCCcccccCChhhcCCCCCCeEeecCc
Q 002214 36 TSLTISDLGLAGTIPSHLGNLSSLQTLVLSRNWFSGTIPKEIGNLTKLKELHLDYNKLQGEIPEELGNLAELEMLVLNNN 115 (952)
Q Consensus 36 ~~l~l~~~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n 115 (952)
+.+|+++++++ .+|..+. ++|++|+|++|.+++..|..|..+++|++|+|++|++++..|++|+++++|++|+|++|
T Consensus 34 ~~l~ls~~~L~-~ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 110 (562)
T 3a79_B 34 SMVDYSNRNLT-HVPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHN 110 (562)
T ss_dssp CEEECTTSCCC-SCCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cEEEcCCCCCc-cCCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCC
Confidence 78999999998 4887765 89999999999999777789999999999999999999888999999999999999999
Q ss_pred cCccccCcccccccccccceeeccccccccCCCCCCCCCCccceEEcccCcccc-cCCccccCCCCCcEEEccCCccccc
Q 002214 116 LLTGTIPASIFNLSFISTALDFSDNSLTGSFPYDMCPGLPRLKGLYVSYNQFKG-PIPNNLWHCKELSSVSLSYNQFTGR 194 (952)
Q Consensus 116 ~l~~~~p~~~~~l~~l~~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~l~~l~~L~~L~L~~N~l~~~ 194 (952)
+++ .+|.. . +++|++|+|++|++++ ..|..|.++++|++|+|++|++++
T Consensus 111 ~l~-~lp~~--~--------------------------l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~- 160 (562)
T 3a79_B 111 RLQ-NISCC--P--------------------------MASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ- 160 (562)
T ss_dssp CCC-EECSC--C--------------------------CTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT-
T ss_pred cCC-ccCcc--c--------------------------cccCCEEECCCCCccccCchHhhcccCcccEEecCCCcccc-
Confidence 998 55554 3 3455555555555543 223455555555555555555543
Q ss_pred CCccccccCCc--cEEEeeCCcC--CccCchhhhccC--CCcEeeeccccccccCCc-cccCCCCccEEEeeCccc----
Q 002214 195 LPRDLGNSTKL--KSLDLGFNNL--NGEIPQEIGNLR--NLEILGIDQSNLVGFVPD-TIFNISTLKILSLFNNTL---- 263 (952)
Q Consensus 195 ~~~~~~~l~~L--~~L~L~~N~l--~~~~p~~~~~l~--~L~~L~L~~n~~~~~~~~-~~~~l~~L~~L~Ls~N~l---- 263 (952)
..+..+++| ++|+|++|.+ ++..|..|..+. .| .+++++|.+.+..++ .+..+++|+.|++++|+.
T Consensus 161 --~~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l-~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~ 237 (562)
T 3a79_B 161 --LDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVL-HLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQR 237 (562)
T ss_dssp --TTTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEE-EEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHH
T ss_pred --CchhhhhhceeeEEEeecccccccccCcccccccCcceE-EEEecCccchhhhhhhcccccceEEEecccccccccch
Confidence 223333333 5555555555 444444444433 22 234444444443322 233455555555555431
Q ss_pred -cccCCCCcccCCCCCcceEEcccCcCCCCCCcccccchhhhhhhccccCccccccccCccee-echhhHHHHHHHhhcc
Q 002214 264 -SGNLPSSKNLIGLPNLEGLNLGLNNLSGSIPSFFFNASKLYALELGYNSNLKRLGLERNYLT-FSTSELMSLFSALVNC 341 (952)
Q Consensus 264 -~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l~l~~~~~L~~L~L~~n~l~-~~~~~~~~~~~~~~~~ 341 (952)
.+.+ ..+.++++|+.|+++++.+.+..... .. ......+|+.|++++|.++ ..+...+.
T Consensus 238 l~~~~---~~l~~l~~L~~L~L~~~~l~~~~~~~---~~-----~~~~~~~L~~L~l~~n~l~~~ip~~~~~-------- 298 (562)
T 3a79_B 238 LMTFL---SELTRGPTLLNVTLQHIETTWKCSVK---LF-----QFFWPRPVEYLNIYNLTITERIDREEFT-------- 298 (562)
T ss_dssp HHHHH---HHHHSCSSCEEEEEEEEEECHHHHHH---HH-----HHHTTSSEEEEEEEEEEECSCCCCCCCC--------
T ss_pred HHHHH---HHHhccCcceEEEecCCcCcHHHHHH---HH-----HhhhcccccEEEEeccEeeccccchhhh--------
Confidence 1110 11333444455555444443211000 00 0001123444444444433 22211000
Q ss_pred ccccccCCCcccEEEccCCCCCCCCCcccccC---CCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCcc
Q 002214 342 KSLKIGNLINLTTLSLGDNNLSGSLPITLGRL---KKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCL 418 (952)
Q Consensus 342 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l---~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 418 (952)
...+.+++|+.+++..|.+ ......+..+ .+|++|++++|.+.... .+..+++|++|++++|++++..|..+
T Consensus 299 --~~~~~L~~L~~~~~~~~~~-~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~ 373 (562)
T 3a79_B 299 --YSETALKSLMIEHVKNQVF-LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGC 373 (562)
T ss_dssp --CCSCSCCEEEEEEEEECCC-SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTC
T ss_pred --cccccchheehhhccccee-ecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhh
Confidence 0014566777777777777 2332333332 67899999999875322 22678889999999999988888888
Q ss_pred CCCCCCcEEeccccccCCcC--CccccCCCCCceeEecCCccCCCCc-hhhhcccccceeecCCcccCCCCcccccCCCC
Q 002214 419 GDLNSLRILSLSSNELTSVI--PSTFWNLEDILGFDFSSNSLNGSLP-LEIENLKAVVDIYLSRNNLSGNIPSTIIGLKN 495 (952)
Q Consensus 419 ~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 495 (952)
..+++|++|++++|+++++. |..|..+++|+.|++++|++++.+| ..+..+++|++|+|++|++++..|..+. ++
T Consensus 374 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~ 451 (562)
T 3a79_B 374 STLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PK 451 (562)
T ss_dssp CSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TT
T ss_pred cccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--Cc
Confidence 89999999999999998754 4568888999999999999987444 4578888999999999998876665544 68
Q ss_pred CceEEccCccccCcccccccccccccEEeCCCCcccccCccchhcccccccccccccccccCCCC
Q 002214 496 LQHLSLEHNKLQGPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFNKLVGEIPR 560 (952)
Q Consensus 496 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~ 560 (952)
|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|+++++..+..+++|+.|++++|+|.|.||.
T Consensus 452 L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 515 (562)
T 3a79_B 452 VKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPG 515 (562)
T ss_dssp CSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCHHH
T ss_pred CCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCcch
Confidence 999999999998 5666666889999999999999854444488889999999999999988874
No 39
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=9.8e-45 Score=404.22 Aligned_cols=269 Identities=23% Similarity=0.275 Sum_probs=202.3
Q ss_pred hccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccC--chhhHHHHHHHHHHHhCCCCccceeeeEeec------CC
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQR--EGALNSFDAECEILKTIRHRNLVKIISSCTN------HN 733 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~ 733 (952)
.++|++.+.||+|+||+||+|++ .+|+.||||+++... ....+.+.+|+++|++++|||||++++++.. .+
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 35799999999999999999997 479999999986443 2345678899999999999999999998753 35
Q ss_pred eeEEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccc
Q 002214 734 FKALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKL 813 (952)
Q Consensus 734 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~ 813 (952)
..|+|||||+ |+|.+++...+ .+++.++..++.||+.||+|| |++|||||||||+|||++.++.+||+|||+|+.
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~~~-~l~~~~~~~~~~qil~al~yl---H~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~ 207 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLKYM---HSAQVIHRDLKPSNLLVNENCELKIGDFGMARG 207 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTSSS-CCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEEEeCCC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCcCcCCCcCccccccCCCCCEEEeecceeee
Confidence 7899999995 67999887644 799999999999999999999 799999999999999999999999999999987
Q ss_pred cCCcC---cccccccccccccccccccCcC-CcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhc---cchhhh
Q 002214 814 LSEED---SMKQTQTLATIGYIAPEYGREG-QVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWIN---DSLPAV 886 (952)
Q Consensus 814 ~~~~~---~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~---~~~~~~ 886 (952)
+.... .......+||+.|+|||++.+. .++.++||||+||++|||++|+.||...... ..+..... ......
T Consensus 208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~-~~l~~I~~~~g~p~~~~ 286 (398)
T 4b99_A 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYV-HQLQLIMMVLGTPSPAV 286 (398)
T ss_dssp C-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHH-HHHHHHHHHHCCCCGGG
T ss_pred cccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHH-HHHHHHHHhcCCCChHH
Confidence 64322 1223346899999999987764 5689999999999999999999999652111 11111110 000000
Q ss_pred hhhcc--------ccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 887 MNIMD--------TNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 887 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
...+. .................+++++.+|+.+||..||++|||+.|+++|
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 287 IQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp TC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 00000 0000000000011123456789999999999999999999999874
No 40
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=2e-44 Score=397.67 Aligned_cols=268 Identities=19% Similarity=0.276 Sum_probs=200.9
Q ss_pred HHhccCCccceecCccceEEEEEEeC----CCcEEEEEEeeccCchhhHHHHHHHHHHHhC-CCCccceeeeEeecCCee
Q 002214 661 RATDQFSEENLIGIGSYGSVYKGRFP----DGIEVAIKVFHLQREGALNSFDAECEILKTI-RHRNLVKIISSCTNHNFK 735 (952)
Q Consensus 661 ~~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 735 (952)
...++|++.+.||+|+||+||+|+.+ +++.||||++..... ..++.+|+++++++ +|||||++++++.+.+..
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~--~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~ 95 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH--PIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV 95 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC--HHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC--HHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence 35678999999999999999999763 478899998865433 35688999999998 699999999999999999
Q ss_pred EEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCC-CcEEEecccccccc
Q 002214 736 ALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDS-MVAHLSDFGIAKLL 814 (952)
Q Consensus 736 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~-~~~kl~Dfgla~~~ 814 (952)
|+||||+++|+|.+++. .+++.++..++.|++.||+|| |++||+||||||+|||++.+ +.+||+|||+|+..
T Consensus 96 ~lvmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~yl---H~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~ 168 (361)
T 4f9c_A 96 VIAMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRI---HQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGT 168 (361)
T ss_dssp EEEEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EEEEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHH---HHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCccc
Confidence 99999999999999884 489999999999999999999 79999999999999999876 79999999999865
Q ss_pred CCcCc---------------------------ccccccccccccccccccCcC-CcCcccchHhHHHHHHHHHhCCCCCC
Q 002214 815 SEEDS---------------------------MKQTQTLATIGYIAPEYGREG-QVSIKGDVYNYGIMLMEVFTGMKPTN 866 (952)
Q Consensus 815 ~~~~~---------------------------~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~ 866 (952)
..... ......+||+.|+|||++.+. .++.++||||+||++|||++|+.||.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~ 248 (361)
T 4f9c_A 169 HDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFY 248 (361)
T ss_dssp TTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSS
T ss_pred CCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCC
Confidence 43211 111235799999999988765 58999999999999999999999985
Q ss_pred ccccCccchhhhhccch-h---hhhhhc-------------------------ccc---ccchhh--HHHHHhhhhhHHH
Q 002214 867 EFFTGEMSIKRWINDSL-P---AVMNIM-------------------------DTN---LLSEDE--EHANVAKQSCASS 912 (952)
Q Consensus 867 ~~~~~~~~~~~~~~~~~-~---~~~~~~-------------------------~~~---~~~~~~--~~~~~~~~~~~~~ 912 (952)
........+.......- + ...... +.. ...... ..........+++
T Consensus 249 ~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~ 328 (361)
T 4f9c_A 249 KASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDE 328 (361)
T ss_dssp CCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHH
T ss_pred CCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHH
Confidence 42221111111110000 0 000000 000 000000 0000112345678
Q ss_pred HHHHHhhccccCCCCCCCHHHHHHH
Q 002214 913 VLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 913 l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
+.+|+.+||..||++|||++|+++|
T Consensus 329 a~DLl~~lL~~dP~~R~ta~eaL~H 353 (361)
T 4f9c_A 329 AYDLLDKLLDLNPASRITAEEALLH 353 (361)
T ss_dssp HHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred HHHHHHHHCcCChhHCcCHHHHhcC
Confidence 9999999999999999999999864
No 41
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=3.4e-43 Score=417.07 Aligned_cols=442 Identities=21% Similarity=0.206 Sum_probs=325.6
Q ss_pred CeEEEEEecCCCCcccCCccccCCcccCeeeccccccccccCCCcCCcCCCcEEeCcCCcccccCChhhcCCCCCCeEee
Q 002214 33 NRVTSLTISDLGLAGTIPSHLGNLSSLQTLVLSRNWFSGTIPKEIGNLTKLKELHLDYNKLQGEIPEELGNLAELEMLVL 112 (952)
Q Consensus 33 ~~~~~l~l~~~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 112 (952)
.++++|+++++.+++..|..++.+++|++|+|++|++++..|+.|..+++|++|+|++|+++ .+|.. .+++|++|+|
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEEC
Confidence 57899999999999877889999999999999999999888999999999999999999999 67776 8999999999
Q ss_pred cCccCcc-ccCcccccccccccceeeccccccccCCCCCCCCCCcc--ceEEcccCcc--cccCCccccCCC--CCcEEE
Q 002214 113 NNNLLTG-TIPASIFNLSFISTALDFSDNSLTGSFPYDMCPGLPRL--KGLYVSYNQF--KGPIPNNLWHCK--ELSSVS 185 (952)
Q Consensus 113 ~~n~l~~-~~p~~~~~l~~l~~~L~l~~n~l~~~~~~~~~~~l~~L--~~L~L~~n~l--~~~~~~~l~~l~--~L~~L~ 185 (952)
++|++++ .+|..+.+++.+ +.|++++|++++. .+..+++| ++|++++|++ ++..|..+..+. .+ .++
T Consensus 129 s~N~l~~l~~p~~~~~l~~L-~~L~L~~n~l~~~----~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l-~l~ 202 (562)
T 3a79_B 129 SFNDFDVLPVCKEFGNLTKL-TFLGLSAAKFRQL----DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVL-HLV 202 (562)
T ss_dssp CSSCCSBCCCCGGGGGCTTC-CEEEEECSBCCTT----TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEE-EEE
T ss_pred CCCCccccCchHhhcccCcc-cEEecCCCccccC----chhhhhhceeeEEEeecccccccccCcccccccCcceE-EEE
Confidence 9999995 345777777655 7777777777641 22334444 7777777777 666666666554 22 456
Q ss_pred ccCCcccccCCc-cccccCCccEEEeeCCcCC----ccCchhhhccCCCcEeeeccccccccCCcc---ccCCCCccEEE
Q 002214 186 LSYNQFTGRLPR-DLGNSTKLKSLDLGFNNLN----GEIPQEIGNLRNLEILGIDQSNLVGFVPDT---IFNISTLKILS 257 (952)
Q Consensus 186 L~~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~----~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~---~~~l~~L~~L~ 257 (952)
+++|.+.+.++. .+..+++|+.|++++|+.. ...+..+..+++|+.|+++++.+.+..... ....++|++|+
T Consensus 203 l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~ 282 (562)
T 3a79_B 203 FHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLN 282 (562)
T ss_dssp ECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEE
T ss_pred ecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEE
Confidence 667766654433 3456677777777776421 112334666666666666655544321110 11223666666
Q ss_pred eeCccccccCCCCccc---CCCCCcceEEcccCcCCCCCCcccccchhhhhhhccccCccccccccCcceeechhhHHHH
Q 002214 258 LFNNTLSGNLPSSKNL---IGLPNLEGLNLGLNNLSGSIPSFFFNASKLYALELGYNSNLKRLGLERNYLTFSTSELMSL 334 (952)
Q Consensus 258 Ls~N~l~~~~~~~~~l---~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l~l~~~~~L~~L~L~~n~l~~~~~~~~~~ 334 (952)
+++|.+++.+|....- ..++.|+.++++.|.+ .+|. ..+...
T Consensus 283 l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~---------------------------------~~~~~~ 327 (562)
T 3a79_B 283 IYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSK---------------------------------EALYSV 327 (562)
T ss_dssp EEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCH---------------------------------HHHHHH
T ss_pred EeccEeeccccchhhhcccccchheehhhccccee--ecCh---------------------------------hhhhhh
Confidence 6666666554433100 2333333333333333 1110 111110
Q ss_pred HHHhhccccccccCCCcccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCccccCCCcceEEEecccccccc-
Q 002214 335 FSALVNCKSLKIGNLINLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGS- 413 (952)
Q Consensus 335 ~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~- 413 (952)
-...+|++|++++|.+.... ....+++|++|++++|.+++..|..|.++++|+.|+|++|++++.
T Consensus 328 ------------~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 393 (562)
T 3a79_B 328 ------------FAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFF 393 (562)
T ss_dssp ------------HHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTT
T ss_pred ------------hccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcc
Confidence 11257999999999987432 237889999999999999998999999999999999999999963
Q ss_pred -CCCccCCCCCCcEEeccccccCC-cCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCccccc
Q 002214 414 -IPSCLGDLNSLRILSLSSNELTS-VIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTII 491 (952)
Q Consensus 414 -~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 491 (952)
+|..+..+++|++|++++|++++ +++..|..+++|+.|++++|++++..|..+. ++|+.|+|++|+|+ .+|..+.
T Consensus 394 ~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~ 470 (562)
T 3a79_B 394 KVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVT 470 (562)
T ss_dssp HHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTT
T ss_pred cchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhc
Confidence 35678999999999999999998 6666799999999999999999876665554 79999999999999 5666666
Q ss_pred CCCCCceEEccCccccCcccccccccccccEEeCCCCcccccCc
Q 002214 492 GLKNLQHLSLEHNKLQGPIPESFGELVSLEFLDLSNNDLSGVIP 535 (952)
Q Consensus 492 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 535 (952)
.+++|+.|+|++|+|+++.+..|..+++|+.|+|++|++.+..+
T Consensus 471 ~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 471 HLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp SSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred CCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence 99999999999999995444449999999999999999986544
No 42
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=2.5e-43 Score=412.92 Aligned_cols=253 Identities=20% Similarity=0.323 Sum_probs=212.5
Q ss_pred hccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEEEc
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVLEY 741 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 741 (952)
.++|++.+.||+|+||+||+|+. .+|+.||+|++........+.+.+|+++|+.++|||||++++++.+++..|+||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 46899999999999999999988 47999999999776666667899999999999999999999999999999999999
Q ss_pred cCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCC--CcEEEeccccccccCCcCc
Q 002214 742 MPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDS--MVAHLSDFGIAKLLSEEDS 819 (952)
Q Consensus 742 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~--~~~kl~Dfgla~~~~~~~~ 819 (952)
|+||+|.+++......+++.++..++.||+.||+|| |+++|+||||||+|||++.+ +.+||+|||+|+.+.....
T Consensus 236 ~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~yl---H~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~ 312 (573)
T 3uto_A 236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHM---HENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS 312 (573)
T ss_dssp CCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSE
T ss_pred cCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCc
Confidence 999999999976666799999999999999999999 78999999999999999854 8999999999998754432
Q ss_pred ccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccchhh
Q 002214 820 MKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSEDE 899 (952)
Q Consensus 820 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 899 (952)
....+||+.|||||++.+..|+.++||||+||++|||++|+.||......+ .+.. +........
T Consensus 313 --~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~-~~~~-----------i~~~~~~~~-- 376 (573)
T 3uto_A 313 --VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE-TLRN-----------VKSCDWNMD-- 376 (573)
T ss_dssp --EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH-HHHH-----------HHTTCCCCC--
T ss_pred --eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH-HHHH-----------HHhCCCCCC--
Confidence 234679999999999999999999999999999999999999996521110 1111 111000000
Q ss_pred HHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 900 EHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 900 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
...+..+++++.+|+.+||..||++|||+.|+++|
T Consensus 377 ---~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 377 ---DSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp ---SGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ---cccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 01123467789999999999999999999999874
No 43
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.6e-43 Score=409.39 Aligned_cols=250 Identities=21% Similarity=0.274 Sum_probs=201.7
Q ss_pred hccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccC---chhhHHHH---HHHHHHHhCCCCccceeeeEeecCCee
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQR---EGALNSFD---AECEILKTIRHRNLVKIISSCTNHNFK 735 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~---~E~~~l~~l~h~niv~l~~~~~~~~~~ 735 (952)
.++|++.+.||+|+||+||+|+. .+|+.||||++.... ......+. .++.+++.++|||||++++++.+++..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 36799999999999999999988 469999999986432 11122333 446677778999999999999999999
Q ss_pred EEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccC
Q 002214 736 ALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLS 815 (952)
Q Consensus 736 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~ 815 (952)
|+||||++||+|.+++...+ .+++..+..++.||+.||+|| |++|||||||||+|||++.+|.+||+|||+|+.+.
T Consensus 268 ylVmEy~~GGdL~~~l~~~~-~l~E~~a~~y~~qIl~aL~yL---H~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~ 343 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHM---HNRFVVYRDLKPANILLDEHGHVRISDLGLACDFS 343 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHH---HTTTEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCccccCCchHHeEEeCCCCEEecccceeeecC
Confidence 99999999999999997654 699999999999999999999 79999999999999999999999999999998765
Q ss_pred CcCcccccccccccccccccccCc-CCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccc
Q 002214 816 EEDSMKQTQTLATIGYIAPEYGRE-GQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNL 894 (952)
Q Consensus 816 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 894 (952)
... ....+||+.|||||++.. ..|+.++||||+||++|||++|+.||......+ ...... ......
T Consensus 344 ~~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~--~~~i~~-------~i~~~~- 410 (689)
T 3v5w_A 344 KKK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD--KHEIDR-------MTLTMA- 410 (689)
T ss_dssp SCC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC--HHHHHH-------HHHHCC-
T ss_pred CCC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHH-------hhcCCC-
Confidence 432 234689999999999864 579999999999999999999999996532221 111000 000000
Q ss_pred cchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCC-----HHHHHHH
Q 002214 895 LSEDEEHANVAKQSCASSVLSLAMECTSESPENRVN-----TKEIISR 937 (952)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~ev~~~ 937 (952)
...+..+++++.+|+.+||..||++|++ ++||.+|
T Consensus 411 --------~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 411 --------VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp --------CCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred --------CCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 0123446788999999999999999998 6887654
No 44
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.2e-42 Score=379.88 Aligned_cols=265 Identities=22% Similarity=0.380 Sum_probs=222.1
Q ss_pred hccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEEEc
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVLEY 741 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 741 (952)
.++|.+.+.||+|+||+||+|++ .+++.||+|++........+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 45789999999999999999998 46899999998766666678899999999999999999999999999999999999
Q ss_pred cCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcCccc
Q 002214 742 MPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEEDSMK 821 (952)
Q Consensus 742 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 821 (952)
+++|+|.+++......+++.++..++.|+++||+|| |++||+||||||+||+++.++.+||+|||+++.........
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~l---H~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (310)
T 3s95_A 89 IKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYL---HSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165 (310)
T ss_dssp CTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC------
T ss_pred cCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH---HhCCccCCCCCcCeEEECCCCCEEEeecccceecccccccc
Confidence 999999999988777899999999999999999999 78999999999999999999999999999998765433211
Q ss_pred c-------------cccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhh
Q 002214 822 Q-------------TQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMN 888 (952)
Q Consensus 822 ~-------------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 888 (952)
. ....||+.|+|||++.+..++.++||||||+++|||++|..|+................
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~------- 238 (310)
T 3s95_A 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRG------- 238 (310)
T ss_dssp --------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHH-------
T ss_pred cccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhc-------
Confidence 1 13569999999999999999999999999999999999999986543322211111000
Q ss_pred hccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHHhhh
Q 002214 889 IMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLLFAN 948 (952)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~~~~ 948 (952)
......+..+++++.+++.+||+.||++|||+.|+++.|+++++.+...
T Consensus 239 -----------~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~~~ 287 (310)
T 3s95_A 239 -----------FLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAGH 287 (310)
T ss_dssp -----------HHHHTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHHC
T ss_pred -----------cccccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhccCc
Confidence 0011123456778999999999999999999999999999999887654
No 45
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=4.1e-42 Score=397.49 Aligned_cols=405 Identities=21% Similarity=0.224 Sum_probs=240.7
Q ss_pred CCCCCCCceEEEeCCCCeEEEEEecCCCCcccCCccccCCcccCeeeccccccccccCCCcCCcCCCcEEeCcCCccccc
Q 002214 17 NASVCSWMGITCDVYGNRVTSLTISDLGLAGTIPSHLGNLSSLQTLVLSRNWFSGTIPKEIGNLTKLKELHLDYNKLQGE 96 (952)
Q Consensus 17 ~~~~c~w~~v~c~~~~~~~~~l~l~~~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~ 96 (952)
+.+.|.|.+. .++.++.+++ .+|. + .++|++|+|++|.+++..|..++.+++|++|+|++|.+.+.
T Consensus 4 ~~~~c~~~~~----------~~~c~~~~l~-~lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~ 69 (455)
T 3v47_A 4 GTSECSVIGY----------NAICINRGLH-QVPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLV 69 (455)
T ss_dssp ---CCEEETT----------EEECCSSCCS-SCCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCE
T ss_pred ccceeEEEcc----------ccCcCCCCcc-cCCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccce
Confidence 4456776542 2333444454 4555 2 26778888888888766677777777777777777777533
Q ss_pred C-ChhhcCCCCCCeEeecCccCccccCcccccccccccceeeccccccccCCCCCCCCCCccceEEcccCcccccCCcc-
Q 002214 97 I-PEELGNLAELEMLVLNNNLLTGTIPASIFNLSFISTALDFSDNSLTGSFPYDMCPGLPRLKGLYVSYNQFKGPIPNN- 174 (952)
Q Consensus 97 ~-p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~l~~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~- 174 (952)
+ |..|+++++|++|+|++|++++..|..+ .++++|++|+|++|++++..+..
T Consensus 70 i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~--------------------------~~l~~L~~L~L~~n~l~~~~~~~~ 123 (455)
T 3v47_A 70 IRNNTFRGLSSLIILKLDYNQFLQLETGAF--------------------------NGLANLEVLTLTQCNLDGAVLSGN 123 (455)
T ss_dssp ECTTTTTTCTTCCEEECTTCTTCEECTTTT--------------------------TTCTTCCEEECTTSCCBTHHHHSS
T ss_pred ECcccccccccCCEEeCCCCccCccChhhc--------------------------cCcccCCEEeCCCCCCCccccCcc
Confidence 3 4567777777777777776663333322 23445566666666555432222
Q ss_pred -ccCCCCCcEEEccCCcccccCCcc-ccccCCccEEEeeCCcCCccCchhhhccCCCcEeeeccccccccCCccccCCCC
Q 002214 175 -LWHCKELSSVSLSYNQFTGRLPRD-LGNSTKLKSLDLGFNNLNGEIPQEIGNLRNLEILGIDQSNLVGFVPDTIFNIST 252 (952)
Q Consensus 175 -l~~l~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~ 252 (952)
|..+++|++|+|++|++++..|.. |+++++|++|+|++|++++..|..+..+. ..+
T Consensus 124 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~----------------------~~~ 181 (455)
T 3v47_A 124 FFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQ----------------------GKH 181 (455)
T ss_dssp TTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGT----------------------TCE
T ss_pred cccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccc----------------------ccc
Confidence 444555555555555554443433 44444444444444444443333333320 134
Q ss_pred ccEEEeeCccccccCCCCcccCCCCCcceEEcccCcCCCCCCcccccchhhhhhhccccCccccccccCcceeechhhHH
Q 002214 253 LKILSLFNNTLSGNLPSSKNLIGLPNLEGLNLGLNNLSGSIPSFFFNASKLYALELGYNSNLKRLGLERNYLTFSTSELM 332 (952)
Q Consensus 253 L~~L~Ls~N~l~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l~l~~~~~L~~L~L~~n~l~~~~~~~~ 332 (952)
|+.|++++|.+.+..+. .+... .
T Consensus 182 L~~L~l~~n~l~~~~~~--------------------------~~~~~-~------------------------------ 204 (455)
T 3v47_A 182 FTLLRLSSITLQDMNEY--------------------------WLGWE-K------------------------------ 204 (455)
T ss_dssp EEEEECTTCBCTTCSTT--------------------------CTTHH-H------------------------------
T ss_pred ccccccccCcccccchh--------------------------hcccc-c------------------------------
Confidence 45555555554432111 10000 0
Q ss_pred HHHHHhhccccccccCCCcccEEEccCCCCCCCCCcccccC---CCCcEEEccCccccCCCCccccCCCcceEEEecccc
Q 002214 333 SLFSALVNCKSLKIGNLINLTTLSLGDNNLSGSLPITLGRL---KKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNK 409 (952)
Q Consensus 333 ~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l---~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~ 409 (952)
...+..+++|++|++++|++++..|..+... ++|+.|++++|.+.+... ..+.
T Consensus 205 ----------~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~--------------~~~~ 260 (455)
T 3v47_A 205 ----------CGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSF--------------GHTN 260 (455)
T ss_dssp ----------HCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCT--------------TCCS
T ss_pred ----------cccccccceeeeEecCCCcccccchhhhhccccccceeeEeecccccccccc--------------chhh
Confidence 0001123344444444444444333333322 445555555544332110 0111
Q ss_pred ccccCCCccCC--CCCCcEEeccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCc
Q 002214 410 LSGSIPSCLGD--LNSLRILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIP 487 (952)
Q Consensus 410 l~~~~~~~~~~--l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 487 (952)
+....+..+.. .++|+.|++++|++++..|..|..+++|+.|++++|++++..|..|.++++|++|+|++|++++..|
T Consensus 261 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 340 (455)
T 3v47_A 261 FKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDS 340 (455)
T ss_dssp SCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECG
T ss_pred hccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcCh
Confidence 11111222222 3567777777777777777777777777777777777777677777888888888888888887778
Q ss_pred ccccCCCCCceEEccCccccCcccccccccccccEEeCCCCcccccCccchhcccccccccccccccccCCCCCCCc
Q 002214 488 STIIGLKNLQHLSLEHNKLQGPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFNKLVGEIPRGGAF 564 (952)
Q Consensus 488 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 564 (952)
..|..+++|++|+|++|++++..|..|..+++|++|+|++|+|++..+..|..+++|+.|++++|+++|.+|....+
T Consensus 341 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l 417 (455)
T 3v47_A 341 RMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYL 417 (455)
T ss_dssp GGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHHH
T ss_pred hHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCcchHH
Confidence 88888999999999999998877888999999999999999999877778889999999999999999999864433
No 46
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=3.4e-42 Score=379.38 Aligned_cols=283 Identities=35% Similarity=0.580 Sum_probs=229.7
Q ss_pred ccccCHHHHHHHhccCCccceecCccceEEEEEEeCCCcEEEEEEeeccCc-hhhHHHHHHHHHHHhCCCCccceeeeEe
Q 002214 651 WRRYSHDELLRATDQFSEENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQRE-GALNSFDAECEILKTIRHRNLVKIISSC 729 (952)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~ 729 (952)
...++..++....++|.+.+.||+|+||.||+|+..+|+.||||++..... .....+.+|++++++++||||+++++++
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 96 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence 356888999999999999999999999999999988899999999865432 2234789999999999999999999999
Q ss_pred ecCCeeEEEEEccCCCChhHHhhhcC---CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEe
Q 002214 730 TNHNFKALVLEYMPKGSLEDCMYASN---FNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLS 806 (952)
Q Consensus 730 ~~~~~~~lv~e~~~~g~L~~~l~~~~---~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~ 806 (952)
...+..++||||+++|+|.+++.... ..+++..+..++.|++.||+|||..+..||+||||||+||+++.++.+||+
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~ 176 (326)
T 3uim_A 97 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 176 (326)
T ss_dssp CCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEEC
T ss_pred ecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEec
Confidence 99999999999999999999997643 249999999999999999999964444499999999999999999999999
Q ss_pred ccccccccCCcCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccc---cCccchhhhhccch
Q 002214 807 DFGIAKLLSEEDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFF---TGEMSIKRWINDSL 883 (952)
Q Consensus 807 Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~---~~~~~~~~~~~~~~ 883 (952)
|||+++..............||+.|+|||++.+..++.++|||||||++|||++|+.||.... ........|.....
T Consensus 177 Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 256 (326)
T 3uim_A 177 DFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 256 (326)
T ss_dssp CCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTT
T ss_pred cCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHh
Confidence 999999776544444445669999999999988889999999999999999999999996321 22223333433322
Q ss_pred hh--hhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 002214 884 PA--VMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIK 940 (952)
Q Consensus 884 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~ 940 (952)
.. .....+...... .+..++.++.+++.+||+.||++|||+.||+++|+.
T Consensus 257 ~~~~~~~~~~~~~~~~-------~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 308 (326)
T 3uim_A 257 KEKKLEALVDVDLQGN-------YKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308 (326)
T ss_dssp SSCCSTTSSCTTCTTS-------CCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred hchhhhhhcChhhccc-------cCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence 21 112222222111 224457889999999999999999999999999974
No 47
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=4.4e-42 Score=377.45 Aligned_cols=279 Identities=33% Similarity=0.553 Sum_probs=227.0
Q ss_pred HHHHHHHhccCCccceecCccceEEEEEEeCCCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEeecCCee
Q 002214 656 HDELLRATDQFSEENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSCTNHNFK 735 (952)
Q Consensus 656 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 735 (952)
..++...+++|++.+.||+|+||.||+|++++|+.||||++........+.+.+|++++++++||||+++++++.+.+..
T Consensus 31 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 110 (321)
T 2qkw_B 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEM 110 (321)
T ss_dssp CSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCC
T ss_pred HHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeE
Confidence 34445577899999999999999999999988999999998776666678899999999999999999999999999999
Q ss_pred EEEEEccCCCChhHHhhhcC---CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEecccccc
Q 002214 736 ALVLEYMPKGSLEDCMYASN---FNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAK 812 (952)
Q Consensus 736 ~lv~e~~~~g~L~~~l~~~~---~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~ 812 (952)
++||||+++|+|.+++.... ..+++..++.++.|+++||+|| |++||+||||||+||+++.++.+||+|||+++
T Consensus 111 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~l---H~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~ 187 (321)
T 2qkw_B 111 ILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYL---HTRAIIHRDVKSINILLDENFVPKITDFGISK 187 (321)
T ss_dssp EEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCSTTEEECTTCCEEECCCTTCE
T ss_pred EEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHh---cCCCeecCCCCHHHEEECCCCCEEEeeccccc
Confidence 99999999999999987543 2589999999999999999999 68999999999999999999999999999998
Q ss_pred ccCCcCcc-cccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCc-cchhhhhccch--hhhhh
Q 002214 813 LLSEEDSM-KQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGE-MSIKRWINDSL--PAVMN 888 (952)
Q Consensus 813 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~-~~~~~~~~~~~--~~~~~ 888 (952)
........ ......||+.|+|||++.+..++.++||||||+++|||++|+.||......+ .....|..... .....
T Consensus 188 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (321)
T 2qkw_B 188 KGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQ 267 (321)
T ss_dssp ECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCS
T ss_pred ccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHH
Confidence 65432221 2233458999999999988899999999999999999999999987644332 12222221111 01112
Q ss_pred hccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 002214 889 IMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDL 944 (952)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~ 944 (952)
.+++.... ..+..++.++.+++.+||+.||++|||+.|++++|+.+.+.
T Consensus 268 ~~~~~~~~-------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 268 IVDPNLAD-------KIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp SSSSSCTT-------CSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred hcChhhcc-------ccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 22222211 12345688899999999999999999999999999988764
No 48
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=5.5e-41 Score=387.98 Aligned_cols=383 Identities=21% Similarity=0.214 Sum_probs=261.5
Q ss_pred CCCCCCceEEEeC-CCCeEEEEEecCCCCcccCCccccCCcccCeeecccccccccc-CCCcCCcCCCcEEeCcCCcccc
Q 002214 18 ASVCSWMGITCDV-YGNRVTSLTISDLGLAGTIPSHLGNLSSLQTLVLSRNWFSGTI-PKEIGNLTKLKELHLDYNKLQG 95 (952)
Q Consensus 18 ~~~c~w~~v~c~~-~~~~~~~l~l~~~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~-p~~l~~l~~L~~L~L~~n~l~~ 95 (952)
.-.|.+.|.+... ...++++|+++++.+++..|..++++++|++|+|++|.+.+.+ |..|..+++|++|+|++|++.+
T Consensus 14 ~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~ 93 (455)
T 3v47_A 14 NAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQ 93 (455)
T ss_dssp EEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCE
T ss_pred ccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCc
Confidence 3467777766543 3467999999999999888999999999999999999998665 5679999999999999999998
Q ss_pred cCChhhcCCCCCCeEeecCccCccccCcccccccccccceeeccccccccCCCCCCCCCCccceEEcccCcccccCCcc-
Q 002214 96 EIPEELGNLAELEMLVLNNNLLTGTIPASIFNLSFISTALDFSDNSLTGSFPYDMCPGLPRLKGLYVSYNQFKGPIPNN- 174 (952)
Q Consensus 96 ~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~l~~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~- 174 (952)
..|..|+++++|++|+|++|.+++.+|.. ..+..+++|++|+|++|++++..|..
T Consensus 94 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~------------------------~~~~~l~~L~~L~L~~n~l~~~~~~~~ 149 (455)
T 3v47_A 94 LETGAFNGLANLEVLTLTQCNLDGAVLSG------------------------NFFKPLTSLEMLVLRDNNIKKIQPASF 149 (455)
T ss_dssp ECTTTTTTCTTCCEEECTTSCCBTHHHHS------------------------STTTTCTTCCEEECCSSBCCSCCCCGG
T ss_pred cChhhccCcccCCEEeCCCCCCCccccCc------------------------ccccCcccCCEEECCCCccCccCcccc
Confidence 88999999999999999999998544332 22346778999999999988776766
Q ss_pred ccCCCCCcEEEccCCcccccCCcccccc--CCccEEEeeCCcCCccCchhh--------hccCCCcEeeeccccccccCC
Q 002214 175 LWHCKELSSVSLSYNQFTGRLPRDLGNS--TKLKSLDLGFNNLNGEIPQEI--------GNLRNLEILGIDQSNLVGFVP 244 (952)
Q Consensus 175 l~~l~~L~~L~L~~N~l~~~~~~~~~~l--~~L~~L~L~~N~l~~~~p~~~--------~~l~~L~~L~L~~n~~~~~~~ 244 (952)
+..+++|+.|++++|++++..|..+..+ .+|+.|++++|.+.+..+..+ ..+++|+.|++++|++.+..|
T Consensus 150 ~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~ 229 (455)
T 3v47_A 150 FLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMA 229 (455)
T ss_dssp GGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHH
T ss_pred cCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccch
Confidence 7888999999999999988888888776 688899999998885544332 244556666666666655555
Q ss_pred ccccCC---CCccEEEeeCccccccCCCCcccCCCCCcceEEcccCcCCCCCCcccccchhhhhhhccccCccccccccC
Q 002214 245 DTIFNI---STLKILSLFNNTLSGNLPSSKNLIGLPNLEGLNLGLNNLSGSIPSFFFNASKLYALELGYNSNLKRLGLER 321 (952)
Q Consensus 245 ~~~~~l---~~L~~L~Ls~N~l~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l~l~~~~~L~~L~L~~ 321 (952)
..+... ++|+.|++++|.+.+... ..+.+.+..+..+.
T Consensus 230 ~~~~~~~~~~~L~~L~l~~~~~~~~~~----------------~~~~~~~~~~~~~~----------------------- 270 (455)
T 3v47_A 230 KRFFDAIAGTKIQSLILSNSYNMGSSF----------------GHTNFKDPDNFTFK----------------------- 270 (455)
T ss_dssp HHHHHHTTTCCEEEEECTTCTTTSCCT----------------TCCSSCCCCTTTTG-----------------------
T ss_pred hhhhccccccceeeEeecccccccccc----------------chhhhccCcccccc-----------------------
Confidence 444332 445555555444332100 00111100000000
Q ss_pred cceeechhhHHHHHHHhhccccccccCCCcccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCccccCCCcce
Q 002214 322 NYLTFSTSELMSLFSALVNCKSLKIGNLINLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLY 401 (952)
Q Consensus 322 n~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~ 401 (952)
-...++|+.|++++|.+++..|..+..+++|++|+|++|.
T Consensus 271 ------------------------~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~---------------- 310 (455)
T 3v47_A 271 ------------------------GLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNE---------------- 310 (455)
T ss_dssp ------------------------GGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSC----------------
T ss_pred ------------------------cccccCceEEEecCccccccchhhcccCCCCCEEECCCCc----------------
Confidence 0012345555555555554444444444555555555444
Q ss_pred EEEeccccccccCCCccCCCCCCcEEeccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcc
Q 002214 402 VVYLNRNKLSGSIPSCLGDLNSLRILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNN 481 (952)
Q Consensus 402 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 481 (952)
+++..|..|.++++|++|++++|+++++.+..|..+++|+.|+|++|++++..|..|..+++|++|+|++|+
T Consensus 311 --------l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 382 (455)
T 3v47_A 311 --------INKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQ 382 (455)
T ss_dssp --------CCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred --------ccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCc
Confidence 444445555556666666666666665556666666666666666666665566667777777777777777
Q ss_pred cCCCCcccccCCCCCceEEccCccccCccc
Q 002214 482 LSGNIPSTIIGLKNLQHLSLEHNKLQGPIP 511 (952)
Q Consensus 482 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 511 (952)
+++..+..|..+++|++|+|++|++++..|
T Consensus 383 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 383 LKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred cccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 776666677888888888888888886555
No 49
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.5e-41 Score=368.35 Aligned_cols=251 Identities=26% Similarity=0.363 Sum_probs=210.1
Q ss_pred hccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEEEc
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVLEY 741 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 741 (952)
.++|++.+.||+|+||+||+|.+ .+|+.||||++........+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 46799999999999999999987 57999999999776665567889999999999999999999999999999999999
Q ss_pred cCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcCccc
Q 002214 742 MPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEEDSMK 821 (952)
Q Consensus 742 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 821 (952)
+++|+|.+++... .+++.++..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+|........ .
T Consensus 99 ~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~ 172 (297)
T 3fxz_A 99 LAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFL---HSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-K 172 (297)
T ss_dssp CTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC-C
T ss_pred CCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHH---HhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc-c
Confidence 9999999998765 489999999999999999999 788999999999999999999999999999987654332 2
Q ss_pred ccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccchhhHH
Q 002214 822 QTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSEDEEH 901 (952)
Q Consensus 822 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 901 (952)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ....... .....
T Consensus 173 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~~~~~--------~~~~~------- 236 (297)
T 3fxz_A 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-LYLIATN--------GTPEL------- 236 (297)
T ss_dssp BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHHHHH--------CSCCC-------
T ss_pred cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhC--------CCCCC-------
Confidence 3346799999999999999999999999999999999999999865211110 0000000 00000
Q ss_pred HHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 902 ANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 902 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
..+..+++.+.+++.+||+.||++|||+.|++++
T Consensus 237 --~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 237 --QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp --SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred --CCccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 0123467789999999999999999999999864
No 50
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.1e-41 Score=364.19 Aligned_cols=258 Identities=24% Similarity=0.420 Sum_probs=217.2
Q ss_pred hccCCccceecCccceEEEEEEeCCCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEEEcc
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVLEYM 742 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 742 (952)
.++|++.+.||+|+||.||+|++.+++.||+|++..... ..+.+.+|++++++++||||+++++++.+++..++||||+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence 467999999999999999999998899999999975443 2367899999999999999999999999999999999999
Q ss_pred CCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcCcccc
Q 002214 743 PKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEEDSMKQ 822 (952)
Q Consensus 743 ~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 822 (952)
++++|.+++......+++..+..++.|+++|++|| |++||+||||||+||+++.++.+||+|||+++..........
T Consensus 88 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~l---H~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 164 (269)
T 4hcu_A 88 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL---EEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 164 (269)
T ss_dssp TTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred CCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHH---HhCCeecCCcchheEEEcCCCCEEeccccccccccccccccc
Confidence 99999999987777799999999999999999999 789999999999999999999999999999987755443344
Q ss_pred cccccccccccccccCcCCcCcccchHhHHHHHHHHHh-CCCCCCccccCccchhhhhccchhhhhhhccccccchhhHH
Q 002214 823 TQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFT-GMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSEDEEH 901 (952)
Q Consensus 823 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 901 (952)
....+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||......+ .... +.....
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~-~~~~------------~~~~~~------ 225 (269)
T 4hcu_A 165 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE-VVED------------ISTGFR------ 225 (269)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-HHHH------------HHTTCC------
T ss_pred cCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHH-HHHH------------HhcCcc------
Confidence 44567889999999988899999999999999999999 999986521110 0000 000000
Q ss_pred HHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 002214 902 ANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDL 944 (952)
Q Consensus 902 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~ 944 (952)
...+..+++++.+++.+||+.||++||++.|++++|+++.+.
T Consensus 226 -~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 226 -LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp -CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -CCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 011233567899999999999999999999999999998763
No 51
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1.1e-40 Score=381.81 Aligned_cols=402 Identities=27% Similarity=0.345 Sum_probs=156.9
Q ss_pred CcccCeeeccccccccccCCCcCCcCCCcEEeCcCCcccccCChhhcCCCCCCeEeecCccCccccCcccccccccccce
Q 002214 56 LSSLQTLVLSRNWFSGTIPKEIGNLTKLKELHLDYNKLQGEIPEELGNLAELEMLVLNNNLLTGTIPASIFNLSFISTAL 135 (952)
Q Consensus 56 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~l~~~L 135 (952)
.++|+.|++++|.+ +.+|++|+++++|++|++++|++.+.+|..++++++|+.++++.|... .++.|
T Consensus 10 ~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~------------~l~~L 76 (454)
T 1jl5_A 10 NTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDR------------QAHEL 76 (454)
T ss_dssp -------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHH------------TCSEE
T ss_pred cccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhcc------------CCCEE
Confidence 45555555555555 355555555555555666555555555555555555533333333210 01334
Q ss_pred eeccccccccCCCCCCCCCCccceEEcccCcccccCCccccCCCCCcEEEccCCcccccCCccccccCCccEEEeeCCcC
Q 002214 136 DFSDNSLTGSFPYDMCPGLPRLKGLYVSYNQFKGPIPNNLWHCKELSSVSLSYNQFTGRLPRDLGNSTKLKSLDLGFNNL 215 (952)
Q Consensus 136 ~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 215 (952)
++++|.+++ +|. ..++|++|++++|++++ +|.. +++|+.|++++|++++ +|.. .++|++|++++|++
T Consensus 77 ~l~~~~l~~-lp~----~~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l 143 (454)
T 1jl5_A 77 ELNNLGLSS-LPE----LPPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQL 143 (454)
T ss_dssp ECTTSCCSC-CCS----CCTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCC
T ss_pred EecCCcccc-CCC----CcCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCC
Confidence 444444331 222 11345555555555543 3322 2445555555555542 1211 13455555555555
Q ss_pred CccCchhhhccCCCcEeeeccccccccCCccccCCCCccEEEeeCccccccCCCCcccCCCCCcceEEcccCcCCCCCCc
Q 002214 216 NGEIPQEIGNLRNLEILGIDQSNLVGFVPDTIFNISTLKILSLFNNTLSGNLPSSKNLIGLPNLEGLNLGLNNLSGSIPS 295 (952)
Q Consensus 216 ~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~ 295 (952)
++ +| .|+.+++|++|++++|++.++ |.. ..+|++|++++|++++ +| .+..+++|++|++++|++++ +|.
T Consensus 144 ~~-lp-~~~~l~~L~~L~l~~N~l~~l-p~~---~~~L~~L~L~~n~l~~-l~---~~~~l~~L~~L~l~~N~l~~-l~~ 212 (454)
T 1jl5_A 144 EK-LP-ELQNSSFLKIIDVDNNSLKKL-PDL---PPSLEFIAAGNNQLEE-LP---ELQNLPFLTAIYADNNSLKK-LPD 212 (454)
T ss_dssp SS-CC-CCTTCTTCCEEECCSSCCSCC-CCC---CTTCCEEECCSSCCSS-CC---CCTTCTTCCEEECCSSCCSS-CCC
T ss_pred CC-Cc-ccCCCCCCCEEECCCCcCccc-CCC---cccccEEECcCCcCCc-Cc---cccCCCCCCEEECCCCcCCc-CCC
Confidence 43 33 355555555555555554442 222 1355555555555543 22 14455555555555555543 111
Q ss_pred ccccchhhhhhhccccCccccccccCcceeechhhHHHHHHHhhccccccccCCCcccEEEccCCCCCCCCCcccccCCC
Q 002214 296 FFFNASKLYALELGYNSNLKRLGLERNYLTFSTSELMSLFSALVNCKSLKIGNLINLTTLSLGDNNLSGSLPITLGRLKK 375 (952)
Q Consensus 296 ~~~~~~~L~~l~l~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~ 375 (952)
.. .+|+.|++++|.++..+ .++.+++|++|++++|++++ +|.. +++
T Consensus 213 ~~--------------~~L~~L~l~~n~l~~lp----------------~~~~l~~L~~L~l~~N~l~~-l~~~---~~~ 258 (454)
T 1jl5_A 213 LP--------------LSLESIVAGNNILEELP----------------ELQNLPFLTTIYADNNLLKT-LPDL---PPS 258 (454)
T ss_dssp CC--------------TTCCEEECCSSCCSSCC----------------CCTTCTTCCEEECCSSCCSS-CCSC---CTT
T ss_pred Cc--------------CcccEEECcCCcCCccc----------------ccCCCCCCCEEECCCCcCCc-cccc---ccc
Confidence 10 12222222222222111 02344555555555555553 2221 245
Q ss_pred CcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCccCCCCCCcEEeccccccCCcCCccccCC-CCCceeEec
Q 002214 376 LQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLRILSLSSNELTSVIPSTFWNL-EDILGFDFS 454 (952)
Q Consensus 376 L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~Ls 454 (952)
|++|++++|++++ .|.. .++|+.|++++|++++. |.. .++|++|++++|+++++. .+ ++|+.|+++
T Consensus 259 L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~i~-----~~~~~L~~L~Ls 325 (454)
T 1jl5_A 259 LEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIRSLC-----DLPPSLEELNVS 325 (454)
T ss_dssp CCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCSEEC-----CCCTTCCEEECC
T ss_pred cCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCCccc-----CCcCcCCEEECC
Confidence 5555555555553 2222 24555555555555531 111 145555666666555421 12 355555555
Q ss_pred CCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEccCccccC--cccccccccccccEEeCCCCcccc
Q 002214 455 SNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNKLQG--PIPESFGELVSLEFLDLSNNDLSG 532 (952)
Q Consensus 455 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~ 532 (952)
+|++++ +|.. +++|+.|++++|+++. +|. .+++|++|+|++|++++ .+|..+..+ +.|.+.+
T Consensus 326 ~N~l~~-lp~~---~~~L~~L~L~~N~l~~-lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L--------~~n~~~~ 389 (454)
T 1jl5_A 326 NNKLIE-LPAL---PPRLERLIASFNHLAE-VPE---LPQNLKQLHVEYNPLREFPDIPESVEDL--------RMNSHLA 389 (454)
T ss_dssp SSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSSCCCCCTTCCEE--------ECCC---
T ss_pred CCcccc-cccc---CCcCCEEECCCCcccc-ccc---hhhhccEEECCCCCCCcCCCChHHHHhh--------hhccccc
Confidence 555553 3322 3455555555555553 333 24555566666665554 334333322 1233333
Q ss_pred cCccchhccccccccccccccccc--CCCC
Q 002214 533 VIPASLEKLLYLKSLNLSFNKLVG--EIPR 560 (952)
Q Consensus 533 ~~~~~~~~l~~L~~L~l~~N~l~~--~~p~ 560 (952)
.+|.. +++|+.|++++|++++ .+|.
T Consensus 390 ~i~~~---~~~L~~L~ls~N~l~~~~~iP~ 416 (454)
T 1jl5_A 390 EVPEL---PQNLKQLHVETNPLREFPDIPE 416 (454)
T ss_dssp ------------------------------
T ss_pred ccccc---cCcCCEEECCCCcCCccccchh
Confidence 33332 2677777777777776 5553
No 52
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=3.7e-41 Score=376.54 Aligned_cols=261 Identities=24% Similarity=0.445 Sum_probs=215.1
Q ss_pred hccCCccceecCccceEEEEEEe--------CCCcEEEEEEeeccC-chhhHHHHHHHHHHHhC-CCCccceeeeEeecC
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRF--------PDGIEVAIKVFHLQR-EGALNSFDAECEILKTI-RHRNLVKIISSCTNH 732 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 732 (952)
.++|.+.+.||+|+||.||+|++ .++..||||+++... ....+.+.+|+.+++++ +||||+++++++.+.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 46899999999999999999985 245689999997553 33456799999999999 899999999999999
Q ss_pred CeeEEEEEccCCCChhHHhhhcC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeee
Q 002214 733 NFKALVLEYMPKGSLEDCMYASN---------------FNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLL 797 (952)
Q Consensus 733 ~~~~lv~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill 797 (952)
+..|+||||+++|+|.+++.... ..+++.+++.++.||++||+|| |++||+||||||+||++
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHH---HhCCeeccccchhhEEE
Confidence 99999999999999999997643 2489999999999999999999 78999999999999999
Q ss_pred CCCCcEEEeccccccccCCcCcc-cccccccccccccccccCcCCcCcccchHhHHHHHHHHHh-CCCCCCccccCccch
Q 002214 798 DDSMVAHLSDFGIAKLLSEEDSM-KQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFT-GMKPTNEFFTGEMSI 875 (952)
Q Consensus 798 ~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~ 875 (952)
+.++.+||+|||+|+........ ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+ .
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~--~ 314 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--L 314 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--H
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHH--H
Confidence 99999999999999876543322 2233457889999999998899999999999999999999 999986532111 1
Q ss_pred hhhhccchhhhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHHh
Q 002214 876 KRWINDSLPAVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLLF 946 (952)
Q Consensus 876 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~~ 946 (952)
. ..+..... ...+..++.++.+++.+||+.||++||++.|+++.|+++.....
T Consensus 315 ~-----------~~~~~~~~-------~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~~ 367 (370)
T 2psq_A 315 F-----------KLLKEGHR-------MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 367 (370)
T ss_dssp H-----------HHHHTTCC-------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred H-----------HHHhcCCC-------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence 1 00110000 01234567889999999999999999999999999999987653
No 53
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.7e-41 Score=372.64 Aligned_cols=274 Identities=23% Similarity=0.313 Sum_probs=211.7
Q ss_pred HhccCCccceecCccceEEEEEEeCCCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEeecCC----eeEE
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSCTNHN----FKAL 737 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~l 737 (952)
..++|++.+.||+|+||+||+|++. ++.||||+++.... ......+|+.++++++||||+++++++.... ..++
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l 99 (322)
T 3soc_A 22 QSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL 99 (322)
T ss_dssp TTEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred chhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence 3468999999999999999999984 89999999865433 2345667999999999999999999998754 3699
Q ss_pred EEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCC----------CeEeCCCCCCCeeeCCCCcEEEec
Q 002214 738 VLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSN----------PIVHCDIKPSNVLLDDSMVAHLSD 807 (952)
Q Consensus 738 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~----------~ivH~Dlk~~Nill~~~~~~kl~D 807 (952)
||||+++|+|.+++... .+++..+..++.|+++||+|| |+. ||+||||||+||+++.++.+||+|
T Consensus 100 v~e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~al~~L---H~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~D 174 (322)
T 3soc_A 100 ITAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYL---HEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIAD 174 (322)
T ss_dssp EEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHH---TCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECC
T ss_pred EEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHH---HhhccccccccCCCEEeCCCChHhEEECCCCeEEEcc
Confidence 99999999999999764 499999999999999999999 677 999999999999999999999999
Q ss_pred cccccccCCcCcc-cccccccccccccccccCc-----CCcCcccchHhHHHHHHHHHhCCCCCCccccCcc-chhhhhc
Q 002214 808 FGIAKLLSEEDSM-KQTQTLATIGYIAPEYGRE-----GQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEM-SIKRWIN 880 (952)
Q Consensus 808 fgla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~-~~~~~~~ 880 (952)
||+|+........ ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||........ .+.....
T Consensus 175 Fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 254 (322)
T 3soc_A 175 FGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIG 254 (322)
T ss_dssp CTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHC
T ss_pred CCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhc
Confidence 9999876543322 2233579999999998876 3567789999999999999999999876432221 1111100
Q ss_pred --cchhhhhhhcc-ccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 002214 881 --DSLPAVMNIMD-TNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDL 944 (952)
Q Consensus 881 --~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~ 944 (952)
.........+. ........ .......+++++.+++.+||+.||++|||+.||++.|+++.+.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 255 QHPSLEDMQEVVVHKKKRPVLR--DYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp SSCCHHHHHHHHTTSCCCCCCC--GGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cCCchhhhhhhhhcccCCCCcc--ccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 01111111111 11111110 0112234577899999999999999999999999999999875
No 54
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=9e-42 Score=364.76 Aligned_cols=258 Identities=23% Similarity=0.422 Sum_probs=216.3
Q ss_pred hccCCccceecCccceEEEEEEeCCCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEEEcc
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVLEYM 742 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 742 (952)
.++|++.+.||+|+||.||+|+++++..||||+++.... ..+.+.+|++++++++||||+++++++.+++..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 468999999999999999999998888999999975543 2367899999999999999999999999999999999999
Q ss_pred CCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcCcccc
Q 002214 743 PKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEEDSMKQ 822 (952)
Q Consensus 743 ~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 822 (952)
++++|.+++......+++.+++.++.|++.|++|| |++||+||||||+||+++.++.+||+|||++...........
T Consensus 86 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 162 (268)
T 3sxs_A 86 SNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFL---ESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS 162 (268)
T ss_dssp TTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHH---HHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEEC
T ss_pred CCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCcCcceEEECCCCCEEEccCccceecchhhhhcc
Confidence 99999999987766799999999999999999999 789999999999999999999999999999987765544444
Q ss_pred cccccccccccccccCcCCcCcccchHhHHHHHHHHHh-CCCCCCccccCccchhhhhccchhhhhhhccccccchhhHH
Q 002214 823 TQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFT-GMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSEDEEH 901 (952)
Q Consensus 823 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 901 (952)
....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||......+. ... ......
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~-~~~-----------~~~~~~------- 223 (268)
T 3sxs_A 163 VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEV-VLK-----------VSQGHR------- 223 (268)
T ss_dssp CSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHH-HHH-----------HHTTCC-------
T ss_pred cCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHH-HHH-----------HHcCCC-------
Confidence 44567788999999988889999999999999999999 9999865321110 000 000000
Q ss_pred HHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 002214 902 ANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDL 944 (952)
Q Consensus 902 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~ 944 (952)
...+..+++++.+++.+||+.||++|||+.|++++|++++++
T Consensus 224 -~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 224 -LYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp -CCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred -CCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 001233467799999999999999999999999999988655
No 55
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.9e-41 Score=372.28 Aligned_cols=259 Identities=25% Similarity=0.444 Sum_probs=212.3
Q ss_pred hccCCccceecCccceEEEEEEeC----CCcEEEEEEeecc-CchhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP----DGIEVAIKVFHLQ-REGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKAL 737 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 737 (952)
.++|++.+.||+|+||.||+|++. .+..||||+++.. .....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 357899999999999999999884 3556999999754 33345679999999999999999999999999999999
Q ss_pred EEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCc
Q 002214 738 VLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEE 817 (952)
Q Consensus 738 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 817 (952)
||||+++|+|.+++......+++.+++.++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++.....
T Consensus 128 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 204 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204 (325)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC--
T ss_pred EeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HHCCeeCCCCCcceEEECCCCCEEECCCCcccccccC
Confidence 9999999999999987767899999999999999999999 7899999999999999999999999999999877543
Q ss_pred Ccc--cccccccccccccccccCcCCcCcccchHhHHHHHHHHHh-CCCCCCccccCccchhhhhccchhhhhhhccccc
Q 002214 818 DSM--KQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFT-GMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNL 894 (952)
Q Consensus 818 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 894 (952)
... ......+|+.|+|||++.+..++.++|||||||++|||++ |..||......+ . ...+....
T Consensus 205 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~-----------~~~~~~~~ 271 (325)
T 3kul_A 205 PDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD--V-----------ISSVEEGY 271 (325)
T ss_dssp --CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH--H-----------HHHHHTTC
T ss_pred ccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHH--H-----------HHHHHcCC
Confidence 222 1222446788999999998899999999999999999999 999986532111 0 00010000
Q ss_pred cchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 002214 895 LSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDL 944 (952)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~ 944 (952)
. ...+..+++++.+++.+||+.||++|||+.||++.|+.+.+.
T Consensus 272 ~-------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~ 314 (325)
T 3kul_A 272 R-------LPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRS 314 (325)
T ss_dssp C-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred C-------CCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhC
Confidence 0 011245678899999999999999999999999999998764
No 56
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=9e-42 Score=383.01 Aligned_cols=260 Identities=25% Similarity=0.406 Sum_probs=215.6
Q ss_pred HhccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccCc-hhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEE
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQRE-GALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVL 739 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 739 (952)
..++|.+.+.||+|+||.||+|++. +++.||||+++.... ...+.+.+|++++++++||||+++++++..++..++||
T Consensus 112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 191 (377)
T 3cbl_A 112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM 191 (377)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence 3568899999999999999999985 789999999875432 33457889999999999999999999999999999999
Q ss_pred EccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcCc
Q 002214 740 EYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEEDS 819 (952)
Q Consensus 740 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 819 (952)
||+++|+|.+++...+..+++..+..++.|+++||+|| |++||+||||||+||+++.++.+||+|||+|+.......
T Consensus 192 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~L---H~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~ 268 (377)
T 3cbl_A 192 ELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYL---ESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVY 268 (377)
T ss_dssp ECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEE
T ss_pred EcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCce
Confidence 99999999999987666799999999999999999999 789999999999999999999999999999986543322
Q ss_pred ccc-cccccccccccccccCcCCcCcccchHhHHHHHHHHHh-CCCCCCccccCccchhhhhccchhhhhhhccccccch
Q 002214 820 MKQ-TQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFT-GMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSE 897 (952)
Q Consensus 820 ~~~-~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 897 (952)
... ....+++.|+|||.+.++.++.++|||||||++|||+| |..||......+ ..+.+.....
T Consensus 269 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~-------------~~~~~~~~~~-- 333 (377)
T 3cbl_A 269 AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ-------------TREFVEKGGR-- 333 (377)
T ss_dssp ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHH-------------HHHHHHTTCC--
T ss_pred eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-------------HHHHHHcCCC--
Confidence 211 12346788999999988899999999999999999999 999986532110 1111111100
Q ss_pred hhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 002214 898 DEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDL 944 (952)
Q Consensus 898 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~ 944 (952)
...+..+++++.+++.+||+.||++|||+.++++.|++++++
T Consensus 334 -----~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 334 -----LPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp -----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -----CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 012345678899999999999999999999999999999875
No 57
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=2.3e-41 Score=368.63 Aligned_cols=265 Identities=26% Similarity=0.407 Sum_probs=206.5
Q ss_pred HHHHHHhccCCccceecCccceEEEEEEeCCCcEEEEEEeeccC--chhhHHHHHHHHHHHhCCCCccceeeeEeecCCe
Q 002214 657 DELLRATDQFSEENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQR--EGALNSFDAECEILKTIRHRNLVKIISSCTNHNF 734 (952)
Q Consensus 657 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 734 (952)
+++....++|++.+.||+|+||+||+|++ +|+.||||++.... ....+.+.+|++++++++||||+++++++...+.
T Consensus 30 ~~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 108 (309)
T 3p86_A 30 DDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPN 108 (309)
T ss_dssp --CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTC
T ss_pred ccccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCc
Confidence 33444567899999999999999999987 68899999986543 3345678999999999999999999999999999
Q ss_pred eEEEEEccCCCChhHHhhhcCC--CCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeCCCCCCCeeeCCCCcEEEecccc
Q 002214 735 KALVLEYMPKGSLEDCMYASNF--NLDIFQRLGIMIDVASALEYLHFGHSNP--IVHCDIKPSNVLLDDSMVAHLSDFGI 810 (952)
Q Consensus 735 ~~lv~e~~~~g~L~~~l~~~~~--~l~~~~~~~i~~~ia~~l~~Lh~~h~~~--ivH~Dlk~~Nill~~~~~~kl~Dfgl 810 (952)
.++||||+++|+|.+++..... .+++..++.++.|+++||+|| |++| |+||||||+||+++.++.+||+|||+
T Consensus 109 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~ 185 (309)
T 3p86_A 109 LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYL---HNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGL 185 (309)
T ss_dssp CEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHH---HTSSSCCCCTTCCGGGEEECTTCCEEECCCC-
T ss_pred eEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHH---HcCCCCEECCCCChhhEEEeCCCcEEECCCCC
Confidence 9999999999999999876442 389999999999999999999 6888 99999999999999999999999999
Q ss_pred ccccCCcCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhc
Q 002214 811 AKLLSEEDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIM 890 (952)
Q Consensus 811 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 890 (952)
++..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||......+ ..... .
T Consensus 186 a~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~--~~~~~----------~ 252 (309)
T 3p86_A 186 SRLKAST-FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ--VVAAV----------G 252 (309)
T ss_dssp -----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHH--HHHHH----------H
T ss_pred Ccccccc-ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHH----------H
Confidence 9865332 222334579999999999999999999999999999999999999986532111 00000 0
Q ss_pred cccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHH
Q 002214 891 DTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLL 945 (952)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~ 945 (952)
.... ....+..+++++.+++.+||+.||++|||++|+++.|+.+.+..
T Consensus 253 ~~~~-------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 253 FKCK-------RLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300 (309)
T ss_dssp HSCC-------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred hcCC-------CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence 0000 00112446778999999999999999999999999999987654
No 58
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.3e-41 Score=375.01 Aligned_cols=251 Identities=24% Similarity=0.369 Sum_probs=199.7
Q ss_pred HhccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccC-chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEE
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQR-EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVL 739 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 739 (952)
..++|++.+.||+|+||+||+|++ .+|+.||||++.... ......+.+|++++++++||||+++++++...+..++||
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 457899999999999999999987 579999999986543 233467899999999999999999999999999999999
Q ss_pred EccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcCc
Q 002214 740 EYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEEDS 819 (952)
Q Consensus 740 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 819 (952)
||+++|+|.+++...+ .+++..+..++.|++.||+|| |++||+||||||+||++++++.+||+|||+|........
T Consensus 88 E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~L---H~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 163 (347)
T 3zgw_A 88 EYCPGGELFDYIISQD-RLSEEETRVVFRQIVSAVAYV---HSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKD 163 (347)
T ss_dssp ECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTSCEEECCCTTCBC------
T ss_pred eCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCC
Confidence 9999999999987654 699999999999999999999 789999999999999999999999999999987654443
Q ss_pred ccccccccccccccccccCcCCc-CcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccchh
Q 002214 820 MKQTQTLATIGYIAPEYGREGQV-SIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSED 898 (952)
Q Consensus 820 ~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 898 (952)
.......||+.|+|||++.+..+ +.++||||+||++|||++|..||..... .... ..+.....
T Consensus 164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~-----~~~~-------~~i~~~~~---- 227 (347)
T 3zgw_A 164 YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNV-----MALY-------KKIMRGKY---- 227 (347)
T ss_dssp --------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHH-------HHHHHTCC----
T ss_pred ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCH-----HHHH-------HHHHcCCC----
Confidence 33445679999999999987775 8899999999999999999999865211 1000 00110000
Q ss_pred hHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 899 EEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 899 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
..+..+++++.+++.+||+.||++|||+.|++++
T Consensus 228 -----~~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 228 -----DVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp -----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred -----CCCCCCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 1123456778999999999999999999999875
No 59
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=6.6e-42 Score=371.35 Aligned_cols=270 Identities=26% Similarity=0.455 Sum_probs=213.2
Q ss_pred hccCCccceecCccceEEEEEEe-----CCCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEeecC--Cee
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRF-----PDGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSCTNH--NFK 735 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 735 (952)
.++|++.+.||+|+||+||+|++ .+++.||||++........+.+.+|++++++++||||+++++++... ...
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 46899999999999999999984 36899999999876666667899999999999999999999998653 568
Q ss_pred EEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccC
Q 002214 736 ALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLS 815 (952)
Q Consensus 736 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~ 815 (952)
++||||+++|+|.+++......+++..++.++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++...
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~ 165 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP 165 (295)
T ss_dssp EEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEEEETTEEEECCCCSCC---
T ss_pred EEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHH---hcCCcccCCCCHhhEEEcCCCeEEEccCccccccc
Confidence 999999999999999987766799999999999999999999 78999999999999999999999999999998765
Q ss_pred CcCcc--cccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccc-h-----hhhh
Q 002214 816 EEDSM--KQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDS-L-----PAVM 887 (952)
Q Consensus 816 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~-~-----~~~~ 887 (952)
..... ......++..|+|||.+.+..++.++||||||+++|||++|..|+...... ........ . ....
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 242 (295)
T 3ugc_A 166 QDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE---FMRMIGNDKQGQMIVFHLI 242 (295)
T ss_dssp ----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH---HHHHHCTTCCTHHHHHHHH
T ss_pred CCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHH---HHhhhcCccccchhHHHHH
Confidence 43221 122345778899999999889999999999999999999999997653211 11110000 0 0011
Q ss_pred hhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHH
Q 002214 888 NIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLL 945 (952)
Q Consensus 888 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~ 945 (952)
+.+.... ....+..+++++.+++.+||+.||++|||+.|+++.|+++++.+
T Consensus 243 ~~~~~~~-------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l 293 (295)
T 3ugc_A 243 ELLKNNG-------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293 (295)
T ss_dssp HHHHTTC-------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHHhccC-------cCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence 1111110 01123467889999999999999999999999999999998865
No 60
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=3.7e-41 Score=363.15 Aligned_cols=259 Identities=23% Similarity=0.433 Sum_probs=214.6
Q ss_pred HhccCCccceecCccceEEEEEEeCCCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEEEc
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVLEY 741 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 741 (952)
..++|++.+.||+|+||.||+|.+.++..||||+++..... .+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 100 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY 100 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBC-HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECC
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCC-HHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEec
Confidence 45689999999999999999999988899999999755432 36789999999999999999999999999999999999
Q ss_pred cCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcCccc
Q 002214 742 MPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEEDSMK 821 (952)
Q Consensus 742 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 821 (952)
+++++|.+++......+++.+++.++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++.........
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 177 (283)
T 3gen_A 101 MANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL---ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS 177 (283)
T ss_dssp CTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHS
T ss_pred cCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHH---HHCCccCCCCccceEEEcCCCCEEEcccccccccccccccc
Confidence 999999999987666799999999999999999999 78999999999999999999999999999998775544333
Q ss_pred ccccccccccccccccCcCCcCcccchHhHHHHHHHHHh-CCCCCCccccCccchhhhhccchhhhhhhccccccchhhH
Q 002214 822 QTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFT-GMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSEDEE 900 (952)
Q Consensus 822 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 900 (952)
.....+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||......+ .... +.....
T Consensus 178 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~-~~~~------------~~~~~~----- 239 (283)
T 3gen_A 178 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE-TAEH------------IAQGLR----- 239 (283)
T ss_dssp TTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH-HHHH------------HHTTCC-----
T ss_pred ccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhH-HHHH------------HhcccC-----
Confidence 344557889999999988889999999999999999998 999986532111 0000 000000
Q ss_pred HHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 002214 901 HANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDL 944 (952)
Q Consensus 901 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~ 944 (952)
...+..+++++.+++.+||+.||++|||+.|++++|+++.++
T Consensus 240 --~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 240 --LYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp --CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --CCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 001233467899999999999999999999999999998764
No 61
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=6.3e-40 Score=375.67 Aligned_cols=403 Identities=26% Similarity=0.301 Sum_probs=270.0
Q ss_pred CCCcCCcCCCcEEeCcCCcccccCChhhcCCCCCCeEeecCccCccccCcccccccccccceeeccccccccCCCCCCCC
Q 002214 74 PKEIGNLTKLKELHLDYNKLQGEIPEELGNLAELEMLVLNNNLLTGTIPASIFNLSFISTALDFSDNSLTGSFPYDMCPG 153 (952)
Q Consensus 74 p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~l~~~L~l~~n~l~~~~~~~~~~~ 153 (952)
|+.+ ..+.|++|++++|.+ +.+|.+++++++|++|++++|.+++.+|.+++++..+ +.+++++|..
T Consensus 5 p~~~-~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L-~~l~l~~c~~----------- 70 (454)
T 1jl5_A 5 PRNV-SNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREM-AVSRLRDCLD----------- 70 (454)
T ss_dssp -------------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHH-HHHHHHHHHH-----------
T ss_pred cccc-ccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhc-chhhhhhhhc-----------
Confidence 4444 468999999999999 5999999999999999999999999999999988765 5677777764
Q ss_pred CCccceEEcccCcccccCCccccCCCCCcEEEccCCcccccCCccccccCCccEEEeeCCcCCccCchhhhccCCCcEee
Q 002214 154 LPRLKGLYVSYNQFKGPIPNNLWHCKELSSVSLSYNQFTGRLPRDLGNSTKLKSLDLGFNNLNGEIPQEIGNLRNLEILG 233 (952)
Q Consensus 154 l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 233 (952)
.++++|++++|++++ +|.. .++|+.|++++|++++ +|.. .++|++|++++|++++ +|.. .++|++|+
T Consensus 71 -~~l~~L~l~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~ 137 (454)
T 1jl5_A 71 -RQAHELELNNLGLSS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLG 137 (454)
T ss_dssp -HTCSEEECTTSCCSC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEE
T ss_pred -cCCCEEEecCCcccc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEE
Confidence 378999999999985 5552 4789999999999996 6654 4789999999999985 3322 27999999
Q ss_pred eccccccccCCccccCCCCccEEEeeCccccccCCCCcccCCCCCcceEEcccCcCCCCCCcccccchhhhhhhccccCc
Q 002214 234 IDQSNLVGFVPDTIFNISTLKILSLFNNTLSGNLPSSKNLIGLPNLEGLNLGLNNLSGSIPSFFFNASKLYALELGYNSN 313 (952)
Q Consensus 234 L~~n~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l~l~~~~~ 313 (952)
+++|++.+ +| .+.++++|++|++++|++++ +|.. .++|++|++++|++++ +| .+..+ ++
T Consensus 138 L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~-----~~~L~~L~L~~n~l~~-l~-~~~~l-----------~~ 196 (454)
T 1jl5_A 138 VSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDL-----PPSLEFIAAGNNQLEE-LP-ELQNL-----------PF 196 (454)
T ss_dssp CCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCC-----CTTCCEEECCSSCCSS-CC-CCTTC-----------TT
T ss_pred CcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCC-----cccccEEECcCCcCCc-Cc-cccCC-----------CC
Confidence 99999998 45 59999999999999999985 3432 3599999999999997 44 34444 44
Q ss_pred cccccccCcceeechhhHHHHHHHhhccccccccCCCcccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCcc
Q 002214 314 LKRLGLERNYLTFSTSELMSLFSALVNCKSLKIGNLINLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQE 393 (952)
Q Consensus 314 L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~ 393 (952)
|+.|++++|.++..+. ..++|++|++++|+++ .+| .+..+++|++|++++|++++ .|..
T Consensus 197 L~~L~l~~N~l~~l~~------------------~~~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~ 255 (454)
T 1jl5_A 197 LTAIYADNNSLKKLPD------------------LPLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL 255 (454)
T ss_dssp CCEEECCSSCCSSCCC------------------CCTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC
T ss_pred CCEEECCCCcCCcCCC------------------CcCcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc
Confidence 5556666665553332 1247899999999988 555 48889999999999999885 3432
Q ss_pred ccCCCcceEEEeccccccccCCCccCCCCCCcEEeccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcc-ccc
Q 002214 394 FCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLRILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENL-KAV 472 (952)
Q Consensus 394 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l-~~L 472 (952)
+++|+.|++++|++++ +|.. +++|++|++++|+++++.. -.++|+.|++++|++++ ++ .+ ++|
T Consensus 256 ---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l~~----~~~~L~~L~l~~N~l~~-i~----~~~~~L 319 (454)
T 1jl5_A 256 ---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGLSE----LPPNLYYLNASSNEIRS-LC----DLPPSL 319 (454)
T ss_dssp ---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEESC----CCTTCCEEECCSSCCSE-EC----CCCTTC
T ss_pred ---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcccC----cCCcCCEEECcCCcCCc-cc----CCcCcC
Confidence 4788999999999885 4543 3788999999999886432 12688899999998885 22 23 478
Q ss_pred ceeecCCcccCCCCcccccCCCCCceEEccCccccCcccccccccccccEEeCCCCcccc--cCccchhccccccccccc
Q 002214 473 VDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNKLQGPIPESFGELVSLEFLDLSNNDLSG--VIPASLEKLLYLKSLNLS 550 (952)
Q Consensus 473 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~l~ 550 (952)
+.|++++|++++ +|.. +++|+.|++++|++++ +|. .+++|++|++++|++++ .+|..+.. ++
T Consensus 320 ~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~-lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~--------L~ 383 (454)
T 1jl5_A 320 EELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE-VPE---LPQNLKQLHVEYNPLREFPDIPESVED--------LR 383 (454)
T ss_dssp CEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSSCCCCCTTCCE--------EE
T ss_pred CEEECCCCcccc-cccc---CCcCCEEECCCCcccc-ccc---hhhhccEEECCCCCCCcCCCChHHHHh--------hh
Confidence 899999999986 4443 5789999999999884 555 46889999999999987 55665543 34
Q ss_pred ccccccCCCCCCCcccccccccccCccCC
Q 002214 551 FNKLVGEIPRGGAFANFSAESFIGNDLLC 579 (952)
Q Consensus 551 ~N~l~~~~p~~~~~~~~~~~~~~~n~~~c 579 (952)
.|.+.+.+|. ...++....+.+|+...
T Consensus 384 ~n~~~~~i~~--~~~~L~~L~ls~N~l~~ 410 (454)
T 1jl5_A 384 MNSHLAEVPE--LPQNLKQLHVETNPLRE 410 (454)
T ss_dssp CCC--------------------------
T ss_pred hccccccccc--ccCcCCEEECCCCcCCc
Confidence 5777787776 34667777777886554
No 62
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=3.3e-41 Score=369.82 Aligned_cols=248 Identities=23% Similarity=0.333 Sum_probs=206.9
Q ss_pred hccCCccceecCccceEEEEEEe-CCCcEEEEEEeecc--CchhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQ--REGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVL 739 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 739 (952)
.++|++.+.||+|+||.||+|++ .+|+.||||++... .....+.+.+|++++++++||||+++++++...+..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 46799999999999999999998 57999999998654 2334567889999999999999999999999999999999
Q ss_pred EccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcCc
Q 002214 740 EYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEEDS 819 (952)
Q Consensus 740 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 819 (952)
||+++|+|.+++...+ .+++..+..++.|+++||+|| |++||+||||||+||+++.++.+||+|||+|+......
T Consensus 94 e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~l---H~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 168 (328)
T 3fe3_A 94 EYASGGEVFDYLVAHG-RMKEKEARSKFRQIVSAVQYC---HQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG- 168 (328)
T ss_dssp CCCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC-
T ss_pred ECCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC-
Confidence 9999999999987654 699999999999999999999 78999999999999999999999999999998765432
Q ss_pred ccccccccccccccccccCcCCcC-cccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccchh
Q 002214 820 MKQTQTLATIGYIAPEYGREGQVS-IKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSED 898 (952)
Q Consensus 820 ~~~~~~~~~~~y~aPE~~~~~~~~-~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 898 (952)
.....+||+.|+|||++.+..+. .++||||+||++|||++|+.||..... .... ..+.....
T Consensus 169 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~~-------~~i~~~~~---- 231 (328)
T 3fe3_A 169 -KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL-----KELR-------ERVLRGKY---- 231 (328)
T ss_dssp -GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHH-------HHHHHCCC----
T ss_pred -ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH-----HHHH-------HHHHhCCC----
Confidence 23446799999999998877764 789999999999999999999865211 1100 00000000
Q ss_pred hHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 899 EEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 899 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
..+..+++++.+++.+||..||.+|||+.|++++
T Consensus 232 -----~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 232 -----RIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp -----CCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred -----CCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0123356789999999999999999999999865
No 63
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=6e-41 Score=363.11 Aligned_cols=261 Identities=25% Similarity=0.398 Sum_probs=208.5
Q ss_pred hccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccC---chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQR---EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALV 738 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 738 (952)
.++|++.+.||+|+||.||+|++ .+++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 45799999999999999999987 468999999985432 33456789999999999999999999999999999999
Q ss_pred EEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcC
Q 002214 739 LEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEED 818 (952)
Q Consensus 739 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 818 (952)
|||+++++|.+++.... .+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++......
T Consensus 90 ~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 165 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHA---HDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS 165 (294)
T ss_dssp EECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC----
T ss_pred EeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEECCCCCEEEEeCCCcccccccc
Confidence 99999999999987654 689999999999999999999 78999999999999999999999999999998765444
Q ss_pred cccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccchh
Q 002214 819 SMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSED 898 (952)
Q Consensus 819 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 898 (952)
........||+.|+|||.+.+..++.++||||+|+++|||++|+.||......+... ..+....
T Consensus 166 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~------------~~~~~~~---- 229 (294)
T 4eqm_A 166 LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAI------------KHIQDSV---- 229 (294)
T ss_dssp ---------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHH------------HHHSSCC----
T ss_pred ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHH------------HHhhccC----
Confidence 333444679999999999999899999999999999999999999986532111100 0011100
Q ss_pred hHHHHHhhhhhHHHHHHHHhhccccCCCCCC-CHHHHHHHHHHHHH
Q 002214 899 EEHANVAKQSCASSVLSLAMECTSESPENRV-NTKEIISRLIKIRD 943 (952)
Q Consensus 899 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~ev~~~L~~i~~ 943 (952)
+......+..+++.+.+++.+||+.||++|| +++++.+.|+.+..
T Consensus 230 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~ 275 (294)
T 4eqm_A 230 PNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLH 275 (294)
T ss_dssp CCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSS
T ss_pred CCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHh
Confidence 0011112345678899999999999999999 89999998887643
No 64
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=1.6e-40 Score=364.28 Aligned_cols=262 Identities=23% Similarity=0.316 Sum_probs=215.1
Q ss_pred cccCHHHHHHHhcc----------CCccceecCccceEEEEEEeC-CCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCC
Q 002214 652 RRYSHDELLRATDQ----------FSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQREGALNSFDAECEILKTIRHR 720 (952)
Q Consensus 652 ~~~~~~~~~~~~~~----------~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 720 (952)
..++.+++..+++. |...+.||+|+||.||+|+.. +|+.||||++........+.+.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 35677777777653 777789999999999999985 7999999999876666667899999999999999
Q ss_pred ccceeeeEeecCCeeEEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCC
Q 002214 721 NLVKIISSCTNHNFKALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDS 800 (952)
Q Consensus 721 niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~ 800 (952)
||+++++++...+..++||||+++|+|.+++... .+++..+..++.|+++||+|| |++||+||||||+||+++.+
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~l~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dlkp~NIll~~~ 177 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV--RLNEEQIATVCEAVLQALAYL---HAQGVIHRDIKSDSILLTLD 177 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC--CCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTT
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEECCC
Confidence 9999999999999999999999999999988653 589999999999999999999 68899999999999999999
Q ss_pred CcEEEeccccccccCCcCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhc
Q 002214 801 MVAHLSDFGIAKLLSEEDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWIN 880 (952)
Q Consensus 801 ~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~ 880 (952)
+.+||+|||+++....... ......||+.|+|||++.+..++.++||||||+++|||++|+.||...... ....
T Consensus 178 ~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~--~~~~--- 251 (321)
T 2c30_A 178 GRVKLSDFGFCAQISKDVP-KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV--QAMK--- 251 (321)
T ss_dssp CCEEECCCTTCEECCSSSC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHH---
T ss_pred CcEEEeeeeeeeecccCcc-ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHH---
Confidence 9999999999987654322 233457999999999999989999999999999999999999998642110 0000
Q ss_pred cchhhhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 881 DSLPAVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
.......+.. ..+..+++++.+++.+||+.||++|||+.|++++
T Consensus 252 ----~~~~~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 252 ----RLRDSPPPKL---------KNSHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp ----HHHHSSCCCC---------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ----HHhcCCCCCc---------CccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0001000000 0122356789999999999999999999999874
No 65
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=7.1e-41 Score=360.39 Aligned_cols=262 Identities=24% Similarity=0.386 Sum_probs=203.9
Q ss_pred HhccCCccceecCccceEEEEEEeC----CCcEEEEEEeeccC-chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeE
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRFP----DGIEVAIKVFHLQR-EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKA 736 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 736 (952)
..++|++.+.||+|+||.||+|.+. .+..||+|+.+... ....+.+.+|+.++++++||||+++++++. ++..+
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 91 (281)
T 1mp8_A 13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 91 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCE
T ss_pred ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccE
Confidence 3568999999999999999999874 25679999986543 334567899999999999999999999985 45689
Q ss_pred EEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCC
Q 002214 737 LVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSE 816 (952)
Q Consensus 737 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~ 816 (952)
+||||+++|+|.+++......+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++....
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 168 (281)
T 1mp8_A 92 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL---ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 168 (281)
T ss_dssp EEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEEEETTEEEECC---------
T ss_pred EEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HhCCeecccccHHHEEECCCCCEEECccccccccCc
Confidence 99999999999999987776799999999999999999999 789999999999999999999999999999987755
Q ss_pred cCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHh-CCCCCCccccCccchhhhhccchhhhhhhcccccc
Q 002214 817 EDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFT-GMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLL 895 (952)
Q Consensus 817 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 895 (952)
..........+++.|+|||.+.+..++.++||||||+++|||++ |..||......+ .... +.....
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~--~~~~----------i~~~~~- 235 (281)
T 1mp8_A 169 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND--VIGR----------IENGER- 235 (281)
T ss_dssp ----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHH----------HHTTCC-
T ss_pred ccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH--HHHH----------HHcCCC-
Confidence 44333334557889999999988889999999999999999997 999986532211 1100 000000
Q ss_pred chhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHHhh
Q 002214 896 SEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLLFA 947 (952)
Q Consensus 896 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~~~ 947 (952)
...+..+++++.+++.+||+.||++|||+.|++++|+++.++-.+
T Consensus 236 -------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~ 280 (281)
T 1mp8_A 236 -------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKA 280 (281)
T ss_dssp -------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred -------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhcc
Confidence 001235678899999999999999999999999999999887654
No 66
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=4.7e-41 Score=375.83 Aligned_cols=259 Identities=26% Similarity=0.473 Sum_probs=202.9
Q ss_pred hccCCccceecCccceEEEEEEeC----CCcEEEEEEeeccC-chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP----DGIEVAIKVFHLQR-EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKAL 737 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 737 (952)
.++|.+.+.||+|+||.||+|++. ++..||||+++... ....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 357999999999999999999874 57789999987543 3345679999999999999999999999999999999
Q ss_pred EEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCc
Q 002214 738 VLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEE 817 (952)
Q Consensus 738 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 817 (952)
||||+++|+|.+++......+++.+++.++.|+++||+|| |++||+||||||+||+++.++.+||+|||+++.....
T Consensus 124 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 200 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDD 200 (373)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeCCCCCcceEEEcCCCCEEECcCccccccccC
Confidence 9999999999999987777899999999999999999999 7889999999999999999999999999999876543
Q ss_pred Cccc--ccccccccccccccccCcCCcCcccchHhHHHHHHHHHh-CCCCCCccccCccchhhhhccchhhhhhhccccc
Q 002214 818 DSMK--QTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFT-GMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNL 894 (952)
Q Consensus 818 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 894 (952)
.... .....+++.|+|||++.+..++.++|||||||++||+++ |+.||...... +....+....
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~-------------~~~~~i~~~~ 267 (373)
T 2qol_A 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-------------DVIKAVDEGY 267 (373)
T ss_dssp -------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH-------------HHHHHHHTTE
T ss_pred CccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH-------------HHHHHHHcCC
Confidence 2211 122345778999999998899999999999999999998 99998653211 0111111110
Q ss_pred cchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 002214 895 LSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDL 944 (952)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~ 944 (952)
. ...+..++.++.+++.+||+.||++||++.||++.|+++.+.
T Consensus 268 ~-------~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~ 310 (373)
T 2qol_A 268 R-------LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310 (373)
T ss_dssp E-------CCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred C-------CCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence 0 011234678899999999999999999999999999998764
No 67
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=1.1e-39 Score=356.14 Aligned_cols=279 Identities=29% Similarity=0.490 Sum_probs=224.6
Q ss_pred ccccCHHHHHHHhccCCcc------ceecCccceEEEEEEeCCCcEEEEEEeeccC----chhhHHHHHHHHHHHhCCCC
Q 002214 651 WRRYSHDELLRATDQFSEE------NLIGIGSYGSVYKGRFPDGIEVAIKVFHLQR----EGALNSFDAECEILKTIRHR 720 (952)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~------~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~ 720 (952)
...++..++..+++.|... +.||+|+||.||+|.. +++.||||++.... ....+.+.+|+.++++++||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 3568889999999998877 8999999999999997 68899999986432 33457789999999999999
Q ss_pred ccceeeeEeecCCeeEEEEEccCCCChhHHhhhc--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeC
Q 002214 721 NLVKIISSCTNHNFKALVLEYMPKGSLEDCMYAS--NFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLD 798 (952)
Q Consensus 721 niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~ 798 (952)
||+++++++.+.+..++||||+++|+|.+++... ...+++..+..++.|++.||+|| |++||+||||||+||+++
T Consensus 91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~l---H~~~i~H~dlkp~Nili~ 167 (307)
T 2nru_A 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFL---HENHHIHRDIKSANILLD 167 (307)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEEC
T ss_pred CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHH---hcCCeecCCCCHHHEEEc
Confidence 9999999999999999999999999999988643 34689999999999999999999 789999999999999999
Q ss_pred CCCcEEEeccccccccCCcCcc-cccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhh
Q 002214 799 DSMVAHLSDFGIAKLLSEEDSM-KQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKR 877 (952)
Q Consensus 799 ~~~~~kl~Dfgla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~ 877 (952)
.++.+||+|||+++........ ......||+.|+|||.+.+ .++.++||||||+++|+|++|..||....... ....
T Consensus 168 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~ 245 (307)
T 2nru_A 168 EAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQ-LLLD 245 (307)
T ss_dssp TTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSS-BTTH
T ss_pred CCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchH-HHHH
Confidence 9999999999999876543222 2233568999999998765 58899999999999999999999987643222 1222
Q ss_pred hhc---cchhhhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHH
Q 002214 878 WIN---DSLPAVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRD 943 (952)
Q Consensus 878 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~ 943 (952)
+.. .........++..+.. .+..++.++.+++.+||+.||++|||+.|++++|+++..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 246 IKEEIEDEEKTIEDYIDKKMND--------ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp HHHHHHTTSCCHHHHSCSSCSC--------CCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHHHhhhhhhhhhhhccccccc--------cchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 211 1111122222222211 124467889999999999999999999999999998864
No 68
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=2.6e-40 Score=360.98 Aligned_cols=270 Identities=21% Similarity=0.318 Sum_probs=207.7
Q ss_pred HhccCCccceecCccceEEEEEEeCCCcEEEEEEeeccC--chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEE
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQR--EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVL 739 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 739 (952)
..++|++.+.||+|+||+||+|++.+|+.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 98 (311)
T 3niz_A 19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF 98 (311)
T ss_dssp SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence 346899999999999999999999889999999986543 233467889999999999999999999999999999999
Q ss_pred EccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcCc
Q 002214 740 EYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEEDS 819 (952)
Q Consensus 740 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 819 (952)
||+++ +|.+.+......+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+|+......
T Consensus 99 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~L---H~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~- 173 (311)
T 3niz_A 99 EFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHC---HQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPV- 173 (311)
T ss_dssp ECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCC-
T ss_pred cCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCchHhEEECCCCCEEEccCcCceecCCCc-
Confidence 99974 88888877776799999999999999999999 78999999999999999999999999999998764332
Q ss_pred ccccccccccccccccccCc-CCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhc---cchhh-hh------h
Q 002214 820 MKQTQTLATIGYIAPEYGRE-GQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWIN---DSLPA-VM------N 888 (952)
Q Consensus 820 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~---~~~~~-~~------~ 888 (952)
.......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||......+. ...... ...+. .. .
T Consensus 174 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~ 252 (311)
T 3niz_A 174 RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ-LPKIFSILGTPNPREWPQVQELPL 252 (311)
T ss_dssp C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTH-HHHHHHHHCCCCTTTSGGGTTSHH
T ss_pred ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHHCCCChHHhhhhhccch
Confidence 22334568999999998876 5689999999999999999999999976433221 111110 00000 00 0
Q ss_pred hccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 889 IMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
..+.................+++++.+++.+||+.||++|||++|++++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 253 WKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp HHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0000000000000111234467789999999999999999999999874
No 69
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=7.6e-41 Score=374.01 Aligned_cols=271 Identities=21% Similarity=0.369 Sum_probs=218.7
Q ss_pred ccCHHHHHHHhccCCccceecCccceEEEEEEe------CCCcEEEEEEeeccCc-hhhHHHHHHHHHHHhC-CCCccce
Q 002214 653 RYSHDELLRATDQFSEENLIGIGSYGSVYKGRF------PDGIEVAIKVFHLQRE-GALNSFDAECEILKTI-RHRNLVK 724 (952)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~ 724 (952)
.+....+....++|.+.+.||+|+||.||+|++ .+++.||||+++.... ...+.+.+|+++++++ +||||++
T Consensus 11 ~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~ 90 (359)
T 3vhe_A 11 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 90 (359)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceee
Confidence 355666677788999999999999999999973 3568999999975433 3456789999999999 7999999
Q ss_pred eeeEeecCC-eeEEEEEccCCCChhHHhhhcCC-----------------------------------------------
Q 002214 725 IISSCTNHN-FKALVLEYMPKGSLEDCMYASNF----------------------------------------------- 756 (952)
Q Consensus 725 l~~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~----------------------------------------------- 756 (952)
+++++.+.+ ..++||||+++|+|.+++.....
T Consensus 91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (359)
T 3vhe_A 91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE 170 (359)
T ss_dssp EEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred eeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence 999988754 48999999999999999876432
Q ss_pred ------------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcC
Q 002214 757 ------------------NLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEED 818 (952)
Q Consensus 757 ------------------~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 818 (952)
.+++..++.++.|+++||+|| |++||+||||||+||+++.++.+||+|||+|+......
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~L---H~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 247 (359)
T 3vhe_A 171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 247 (359)
T ss_dssp -------------CTTTTCBCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCT
T ss_pred cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHH---HHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccc
Confidence 189999999999999999999 78999999999999999999999999999998764433
Q ss_pred c-ccccccccccccccccccCcCCcCcccchHhHHHHHHHHHh-CCCCCCccccCccchhhhhccchhhhhhhccccccc
Q 002214 819 S-MKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFT-GMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLS 896 (952)
Q Consensus 819 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 896 (952)
. .......+|+.|+|||++.+..++.++|||||||++|||+| |+.||......+..... +.....
T Consensus 248 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~------------~~~~~~- 314 (359)
T 3vhe_A 248 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR------------LKEGTR- 314 (359)
T ss_dssp TCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHH------------HHHTCC-
T ss_pred cchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHH------------HHcCCC-
Confidence 2 22334568899999999988899999999999999999998 99998653222111111 000000
Q ss_pred hhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHH
Q 002214 897 EDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLL 945 (952)
Q Consensus 897 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~ 945 (952)
...+..+++++.+++.+||+.||++|||+.|++++|+++.+..
T Consensus 315 ------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 357 (359)
T 3vhe_A 315 ------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 357 (359)
T ss_dssp ------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence 0012345678999999999999999999999999999988654
No 70
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=3.4e-40 Score=358.56 Aligned_cols=266 Identities=16% Similarity=0.189 Sum_probs=216.8
Q ss_pred hccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccCchhhHHHHHHHHHHHhC-CCCccceeeeEeecCCeeEEEEE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQREGALNSFDAECEILKTI-RHRNLVKIISSCTNHNFKALVLE 740 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 740 (952)
.++|++.+.||+|+||.||+|++ .+|+.||||++..... .+.+.+|+.+++++ +|++++++++++.+....++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc--cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 45799999999999999999997 5799999999864432 35678999999999 79999999999999999999999
Q ss_pred ccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCc-----EEEeccccccccC
Q 002214 741 YMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMV-----AHLSDFGIAKLLS 815 (952)
Q Consensus 741 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~-----~kl~Dfgla~~~~ 815 (952)
|+ +++|.+++...+..+++..+..++.|+++||+|| |++||+||||||+||+++.++. +||+|||+|+...
T Consensus 87 ~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~ 162 (298)
T 1csn_A 87 LL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSI---HEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR 162 (298)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHH---HTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred ec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccc
Confidence 99 9999999987776799999999999999999999 7899999999999999987776 9999999998765
Q ss_pred CcCcc------cccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhh
Q 002214 816 EEDSM------KQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNI 889 (952)
Q Consensus 816 ~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 889 (952)
..... ......||+.|+|||++.+..++.++||||||+++|||++|+.||........ ..... .+
T Consensus 163 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~--~~~~~-------~~ 233 (298)
T 1csn_A 163 DPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATN--KQKYE-------RI 233 (298)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCH--HHHHH-------HH
T ss_pred cccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhcccc--HHHHH-------HH
Confidence 43221 12345699999999999998999999999999999999999999976322211 00000 00
Q ss_pred ccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHHhh
Q 002214 890 MDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLLFA 947 (952)
Q Consensus 890 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~~~ 947 (952)
.... ...........+++++.+++.+||+.||++||++++|++.|+++.++...
T Consensus 234 ~~~~----~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~ 287 (298)
T 1csn_A 234 GEKK----QSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNT 287 (298)
T ss_dssp HHHH----HHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred Hhhc----cCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCC
Confidence 0000 00001112235678899999999999999999999999999999887654
No 71
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=2e-40 Score=365.61 Aligned_cols=264 Identities=19% Similarity=0.225 Sum_probs=214.2
Q ss_pred hccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccCchhhHHHHHHHHHHHhC-CCCccceeeeEeecCCeeEEEEE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQREGALNSFDAECEILKTI-RHRNLVKIISSCTNHNFKALVLE 740 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 740 (952)
.++|++.+.||+|+||+||+|+. .+|+.||||++..... .+.+.+|+++++++ +||||+++++++...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 46799999999999999999997 5799999999865433 35688999999999 99999999999999999999999
Q ss_pred ccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCc-----EEEeccccccccC
Q 002214 741 YMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMV-----AHLSDFGIAKLLS 815 (952)
Q Consensus 741 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~-----~kl~Dfgla~~~~ 815 (952)
|+ +++|.+++......+++..+..++.|++.||+|| |++||+||||||+||+++.++. +||+|||+|+...
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L---H~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~ 161 (330)
T 2izr_A 86 LL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYV---HSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI 161 (330)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESB
T ss_pred eC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeee
Confidence 99 9999999987666899999999999999999999 7889999999999999998887 9999999998764
Q ss_pred CcCcc------cccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhh
Q 002214 816 EEDSM------KQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNI 889 (952)
Q Consensus 816 ~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 889 (952)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ...........
T Consensus 162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~--~~~~~~~i~~~---- 235 (330)
T 2izr_A 162 DPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADT--LKERYQKIGDT---- 235 (330)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSS--HHHHHHHHHHH----
T ss_pred cCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccccc--HHHHHHHHHhh----
Confidence 43221 1234679999999999999999999999999999999999999997642211 11100000000
Q ss_pred ccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHHh
Q 002214 890 MDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLLF 946 (952)
Q Consensus 890 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~~ 946 (952)
. ...........++ ++.+++..||+.||.+||++.+|.+.|+++.++..
T Consensus 236 ---~----~~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~ 284 (330)
T 2izr_A 236 ---K----RATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKG 284 (330)
T ss_dssp ---H----HHSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred ---h----ccCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 0 0000011122356 89999999999999999999999999999987753
No 72
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-40 Score=364.14 Aligned_cols=252 Identities=20% Similarity=0.321 Sum_probs=209.5
Q ss_pred hccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEEEc
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVLEY 741 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 741 (952)
.++|.+.+.||+|+||.||+|++. +++.||+|++.... .....+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 468999999999999999999884 68999999986543 3346788999999999999999999999999999999999
Q ss_pred cCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCC--CCcEEEeccccccccCCcCc
Q 002214 742 MPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDD--SMVAHLSDFGIAKLLSEEDS 819 (952)
Q Consensus 742 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~--~~~~kl~Dfgla~~~~~~~~ 819 (952)
+++|+|.+++......+++.++..++.|+++||+|| |++||+||||||+||+++. ++.+||+|||+++.......
T Consensus 83 ~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~l---H~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~ 159 (321)
T 1tki_A 83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFL---HSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN 159 (321)
T ss_dssp CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCc
Confidence 999999999987766799999999999999999999 7899999999999999987 78999999999987754332
Q ss_pred ccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccchhh
Q 002214 820 MKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSEDE 899 (952)
Q Consensus 820 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 899 (952)
.....||+.|+|||++.+..++.++|||||||++|||++|..||...... .. ...+........
T Consensus 160 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-----~~-------~~~i~~~~~~~~-- 223 (321)
T 1tki_A 160 --FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ-----QI-------IENIMNAEYTFD-- 223 (321)
T ss_dssp --EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH-----HH-------HHHHHHTCCCCC--
T ss_pred --cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH-----HH-------HHHHHcCCCCCC--
Confidence 23456899999999999888999999999999999999999998652111 00 011111111000
Q ss_pred HHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 900 EHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 900 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
......++.++.+++.+||..||++|||+.|++++
T Consensus 224 ---~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 224 ---EEAFKEISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp ---HHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ---hhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 11123467889999999999999999999999885
No 73
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=3.4e-40 Score=359.06 Aligned_cols=264 Identities=26% Similarity=0.383 Sum_probs=203.8
Q ss_pred hccCCccceecCccceEEEEEEeCCCcEEEEEEeeccCchhhHHHHHHHHHHHh--CCCCccceeeeEeec----CCeeE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQREGALNSFDAECEILKT--IRHRNLVKIISSCTN----HNFKA 736 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~----~~~~~ 736 (952)
.++|++.+.||+|+||+||+|++ +|+.||||++.... ...+.+|.+++.. ++||||+++++++.. ....+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD---EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecccc---chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 56899999999999999999998 78999999986543 3456677777776 799999999998654 34688
Q ss_pred EEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-----cCCCCeEeCCCCCCCeeeCCCCcEEEeccccc
Q 002214 737 LVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHF-----GHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIA 811 (952)
Q Consensus 737 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~-----~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla 811 (952)
+||||+++|+|.+++... .+++..++.++.|++.||+|||. .++++|+||||||+||+++.++.+||+|||+|
T Consensus 83 lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a 160 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 160 (301)
T ss_dssp EEECCCTTCBHHHHHTTC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred EehhhccCCCHHHHHhhc--ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCe
Confidence 999999999999999643 59999999999999999999941 11899999999999999999999999999999
Q ss_pred cccCCcCccc---ccccccccccccccccCcC------CcCcccchHhHHHHHHHHHhC----------CCCCCccccCc
Q 002214 812 KLLSEEDSMK---QTQTLATIGYIAPEYGREG------QVSIKGDVYNYGIMLMEVFTG----------MKPTNEFFTGE 872 (952)
Q Consensus 812 ~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slG~~l~el~tg----------~~p~~~~~~~~ 872 (952)
+......... .....||+.|+|||++.+. .++.++|||||||++|||++| +.||.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~ 240 (301)
T 3q4u_A 161 VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPND 240 (301)
T ss_dssp EEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCC
Confidence 8654332221 2234799999999998776 556799999999999999999 66665543333
Q ss_pred cchhhhhccchhhhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 002214 873 MSIKRWINDSLPAVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKI 941 (952)
Q Consensus 873 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i 941 (952)
........... ........+ ....+..+++++.+++.+||+.||++|||+.||++.|+++
T Consensus 241 ~~~~~~~~~~~-------~~~~~~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 241 PSFEDMRKVVC-------VDQQRPNIP--NRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CCHHHHHHHHT-------TSCCCCCCC--GGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred cchhhhhHHHh-------ccCCCCCCC--hhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 22222111000 000000000 0112344678899999999999999999999999999876
No 74
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.6e-40 Score=371.56 Aligned_cols=271 Identities=17% Similarity=0.193 Sum_probs=210.6
Q ss_pred HhccCCccceecCccceEEEEEEeCC------CcEEEEEEeeccCchh-----------hHHHHHHHHHHHhCCCCccce
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRFPD------GIEVAIKVFHLQREGA-----------LNSFDAECEILKTIRHRNLVK 724 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~ 724 (952)
..++|++.+.||+|+||.||+|.+.+ ++.||||++....... ...+..|+..++.++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 35689999999999999999998854 4789999986543211 112345666677788999999
Q ss_pred eeeEeecC----CeeEEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeC--
Q 002214 725 IISSCTNH----NFKALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLD-- 798 (952)
Q Consensus 725 l~~~~~~~----~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~-- 798 (952)
+++++... ...++||||+ +++|.+++......+++..++.++.|++.||+|| |++||+||||||+|||++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~l---H~~~iiHrDlkp~Nill~~~ 188 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYI---HEHEYVHGDIKASNLLLNYK 188 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEEESS
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH---HHCCeEEecCCHHHEEEecC
Confidence 99998764 4589999999 9999999988767899999999999999999999 788999999999999999
Q ss_pred CCCcEEEeccccccccCCcCccc------ccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCc
Q 002214 799 DSMVAHLSDFGIAKLLSEEDSMK------QTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGE 872 (952)
Q Consensus 799 ~~~~~kl~Dfgla~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~ 872 (952)
.++.+||+|||+|+.+....... .....||+.|+|||++.+..++.++|||||||++|||+||+.||.......
T Consensus 189 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~ 268 (364)
T 3op5_A 189 NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP 268 (364)
T ss_dssp CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH
T ss_pred CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCH
Confidence 89999999999998765432211 123459999999999999899999999999999999999999997533221
Q ss_pred cchhhhhccc-hhhhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHHhh
Q 002214 873 MSIKRWINDS-LPAVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLLFA 947 (952)
Q Consensus 873 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~~~ 947 (952)
. ........ .+.....++..+ ....+++++.+++..||+.||++||++.++++.|+++.+....
T Consensus 269 ~-~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~ 333 (364)
T 3op5_A 269 K-YVRDSKIRYRENIASLMDKCF----------PAANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGS 333 (364)
T ss_dssp H-HHHHHHHHHHHCHHHHHHHHS----------CTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred H-HHHHHHHHhhhhHHHHHHHhc----------ccccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCC
Confidence 1 11111111 111111111110 1134578899999999999999999999999999999887543
No 75
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.9e-40 Score=352.90 Aligned_cols=258 Identities=24% Similarity=0.404 Sum_probs=216.1
Q ss_pred hccCCccceecCccceEEEEEEeCCCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEEEcc
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVLEYM 742 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 742 (952)
.++|++.+.||+|+||.||+|.+.+++.||+|++...... .+.+.+|++++++++||||+++++++.+++..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBC-HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCC-HHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 4679999999999999999999988999999999755433 367899999999999999999999999999999999999
Q ss_pred CCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcCcccc
Q 002214 743 PKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEEDSMKQ 822 (952)
Q Consensus 743 ~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 822 (952)
++++|.+++......+++..+..++.|+++||+|| |++||+||||||+||+++.++.+||+|||+++..........
T Consensus 86 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 162 (267)
T 3t9t_A 86 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL---EEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 162 (267)
T ss_dssp TTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred CCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCchheEEECCCCCEEEccccccccccccccccc
Confidence 99999999987766799999999999999999999 789999999999999999999999999999987654333333
Q ss_pred cccccccccccccccCcCCcCcccchHhHHHHHHHHHh-CCCCCCccccCccchhhhhccchhhhhhhccccccchhhHH
Q 002214 823 TQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFT-GMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSEDEEH 901 (952)
Q Consensus 823 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 901 (952)
....+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... ... ..+.....
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~--------~~i~~~~~------ 223 (267)
T 3t9t_A 163 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-----EVV--------EDISTGFR------ 223 (267)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHH--------HHHHTTCC------
T ss_pred ccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH-----HHH--------HHHhcCCc------
Confidence 34567889999999988889999999999999999999 89998652111 000 00000000
Q ss_pred HHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 002214 902 ANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDL 944 (952)
Q Consensus 902 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~ 944 (952)
...+..++.++.+++.+||+.||++||++.|++++|+++.++
T Consensus 224 -~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 224 -LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp -CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -CCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 001233567899999999999999999999999999998763
No 76
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=2.5e-40 Score=363.69 Aligned_cols=249 Identities=23% Similarity=0.315 Sum_probs=206.9
Q ss_pred hccCCccceecCccceEEEEEEeC-CCcEEEEEEeecc---CchhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQ---REGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALV 738 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 738 (952)
.++|++.+.||+|+||+||+|+.. +|+.||+|+++.. .......+.+|++++++++||||+++++++...+..|+|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 468999999999999999999884 6999999999654 223456788999999999999999999999999999999
Q ss_pred EEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcC
Q 002214 739 LEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEED 818 (952)
Q Consensus 739 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 818 (952)
|||+++|+|.+++...+ .+++..+..++.||+.||+|| |++||+||||||+||+++.++.+||+|||+|+......
T Consensus 84 ~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 159 (337)
T 1o6l_A 84 MEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYL---HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp EECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred EeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCC
Confidence 99999999999887654 689999999999999999999 78999999999999999999999999999998643322
Q ss_pred cccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccchh
Q 002214 819 SMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSED 898 (952)
Q Consensus 819 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 898 (952)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||..... .... ..+.....
T Consensus 160 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-----~~~~-------~~i~~~~~---- 222 (337)
T 1o6l_A 160 -ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----ERLF-------ELILMEEI---- 222 (337)
T ss_dssp -CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHH-------HHHHHCCC----
T ss_pred -CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH-----HHHH-------HHHHcCCC----
Confidence 223346799999999999999999999999999999999999999864211 0000 00000000
Q ss_pred hHHHHHhhhhhHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 002214 899 EEHANVAKQSCASSVLSLAMECTSESPENRV-----NTKEIISR 937 (952)
Q Consensus 899 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~ev~~~ 937 (952)
..+..+++++.+++.+||+.||++|| ++.|++++
T Consensus 223 -----~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 223 -----RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp -----CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred -----CCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 01234577899999999999999999 89999875
No 77
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=3.3e-40 Score=366.11 Aligned_cols=253 Identities=20% Similarity=0.321 Sum_probs=207.8
Q ss_pred HhccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccCch------hhHHHHHHHHHHHhCCCCccceeeeEeecCCe
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQREG------ALNSFDAECEILKTIRHRNLVKIISSCTNHNF 734 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 734 (952)
..++|.+.+.||+|+||.||+|+.. +|+.||+|+++..... ..+.+.+|+.++++++||||+++++++.+.+.
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 89 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD 89 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence 3467999999999999999999884 6999999998754321 24678999999999999999999999999999
Q ss_pred eEEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCC----cEEEecccc
Q 002214 735 KALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSM----VAHLSDFGI 810 (952)
Q Consensus 735 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~----~~kl~Dfgl 810 (952)
.++||||+++|+|.+++.... .+++..+..++.||+.||+|| |++||+||||||+||+++.++ .+||+|||+
T Consensus 90 ~~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~L---H~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~ 165 (361)
T 2yab_A 90 VVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYL---HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (361)
T ss_dssp EEEEEECCCSCBHHHHHTTCS-CCBHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEESCTTSSSCCEEECCCSS
T ss_pred EEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEEeCCCCCccCEEEEecCC
Confidence 999999999999999987543 699999999999999999999 789999999999999998877 799999999
Q ss_pred ccccCCcCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhc
Q 002214 811 AKLLSEEDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIM 890 (952)
Q Consensus 811 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 890 (952)
++...... ......||+.|+|||++.+..++.++||||+||++|+|++|..||...... ..+. .+.
T Consensus 166 a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~-~~~~-----------~i~ 231 (361)
T 2yab_A 166 AHEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-ETLA-----------NIT 231 (361)
T ss_dssp CEECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHHH-----------HHH
T ss_pred ceEcCCCC--ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH-HHHH-----------HHH
Confidence 98765432 223457999999999999889999999999999999999999998652111 0011 111
Q ss_pred cccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 891 DTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
...... ....+..+++++.+++.+||..||++|||+.|++++
T Consensus 232 ~~~~~~-----~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 232 AVSYDF-----DEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp TTCCCC-----CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hcCCCC-----CchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 100000 011223467789999999999999999999999863
No 78
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=3.2e-40 Score=359.45 Aligned_cols=263 Identities=26% Similarity=0.461 Sum_probs=207.1
Q ss_pred HhccCCccceecCccceEEEEEEeCCCcEEEEEEeeccC--chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEE
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQR--EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVL 739 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 739 (952)
..++|.+.+.||+|+||.||+|++. ..+|+|+++... ....+.+.+|+.++++++||||+++++++.. +..++||
T Consensus 34 ~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~lv~ 110 (307)
T 3lb7_A 34 EASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT 110 (307)
T ss_dssp CTTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred cccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEEEE
Confidence 3468999999999999999999864 368999886533 3345778999999999999999999998764 4578999
Q ss_pred EccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcC-
Q 002214 740 EYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEED- 818 (952)
Q Consensus 740 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~- 818 (952)
||+++++|.+++......+++.++..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+|+......
T Consensus 111 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~ 187 (307)
T 3lb7_A 111 QWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYL---HAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG 187 (307)
T ss_dssp ECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCSSSEEECTTSCEEECCCCSSCC------
T ss_pred ecCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HhCCEeeCCCChhhEEEcCCCCEEEccCCCceecccccc
Confidence 99999999999987777899999999999999999999 78899999999999999999999999999998654321
Q ss_pred cccccccccccccccccccC---cCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhcccccc
Q 002214 819 SMKQTQTLATIGYIAPEYGR---EGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLL 895 (952)
Q Consensus 819 ~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 895 (952)
........||+.|+|||++. +..++.++|||||||++|||++|+.||......+......... ...+..
T Consensus 188 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~-------~~~~~~- 259 (307)
T 3lb7_A 188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRG-------YASPDL- 259 (307)
T ss_dssp ------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHT-------CCCCCS-
T ss_pred cccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcC-------CCCcch-
Confidence 22223457999999999875 5678899999999999999999999996532211111000000 000000
Q ss_pred chhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHH
Q 002214 896 SEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLL 945 (952)
Q Consensus 896 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~ 945 (952)
......+++++.+++.+||+.||++||++.|++++|+.+...+
T Consensus 260 -------~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~ 302 (307)
T 3lb7_A 260 -------SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp -------TTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred -------hhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhc
Confidence 0012346788999999999999999999999999999887654
No 79
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=3.5e-40 Score=361.16 Aligned_cols=266 Identities=21% Similarity=0.371 Sum_probs=217.3
Q ss_pred HhccCCccceecCccceEEEEEEe------CCCcEEEEEEeeccCc-hhhHHHHHHHHHHHhC-CCCccceeeeEeecCC
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRF------PDGIEVAIKVFHLQRE-GALNSFDAECEILKTI-RHRNLVKIISSCTNHN 733 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 733 (952)
..++|++.+.||+|+||.||+|++ .+++.||||+++.... ...+.+.+|+.+++++ +||||+++++++..++
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 100 (313)
T 1t46_A 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 100 (313)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence 456899999999999999999985 3578999999975543 3457789999999999 9999999999999999
Q ss_pred eeEEEEEccCCCChhHHhhhcCC-----------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCee
Q 002214 734 FKALVLEYMPKGSLEDCMYASNF-----------------NLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVL 796 (952)
Q Consensus 734 ~~~lv~e~~~~g~L~~~l~~~~~-----------------~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nil 796 (952)
..++||||+++|+|.+++..... .+++..++.++.|+++||+|| |++||+||||||+||+
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nil 177 (313)
T 1t46_A 101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNIL 177 (313)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEE
T ss_pred CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCccceEE
Confidence 99999999999999999876543 489999999999999999999 7889999999999999
Q ss_pred eCCCCcEEEeccccccccCCcCccc-ccccccccccccccccCcCCcCcccchHhHHHHHHHHHh-CCCCCCccccCccc
Q 002214 797 LDDSMVAHLSDFGIAKLLSEEDSMK-QTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFT-GMKPTNEFFTGEMS 874 (952)
Q Consensus 797 l~~~~~~kl~Dfgla~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~ 874 (952)
++.++.+||+|||+++......... .....+|+.|+|||.+.+..++.++||||||+++|||+| |+.||........
T Consensus 178 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~- 256 (313)
T 1t46_A 178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK- 256 (313)
T ss_dssp EETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH-
T ss_pred EcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhH-
Confidence 9999999999999998765443321 223457889999999988899999999999999999999 9999865322111
Q ss_pred hhhhhccchhhhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHHhhhc
Q 002214 875 IKRWINDSLPAVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLLFANI 949 (952)
Q Consensus 875 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~~~~~ 949 (952)
.... +...... ..+..+++++.+++.+||+.||++|||+.|++++|+++.+...++|
T Consensus 257 ~~~~-----------~~~~~~~-------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~i 313 (313)
T 1t46_A 257 FYKM-----------IKEGFRM-------LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTNHI 313 (313)
T ss_dssp HHHH-----------HHHTCCC-------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTCC--
T ss_pred HHHH-----------hccCCCC-------CCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHhhcCC
Confidence 1110 1100000 0123457789999999999999999999999999999988765543
No 80
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.8e-40 Score=368.62 Aligned_cols=261 Identities=25% Similarity=0.435 Sum_probs=214.7
Q ss_pred HhccCCccceecCccceEEEEEEe--------CCCcEEEEEEeeccC-chhhHHHHHHHHHHHhC-CCCccceeeeEeec
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRF--------PDGIEVAIKVFHLQR-EGALNSFDAECEILKTI-RHRNLVKIISSCTN 731 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 731 (952)
..++|.+.+.||+|+||+||+|++ .+++.||||+++... ....+.+.+|+++++++ +||||+++++++..
T Consensus 67 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred chhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 346899999999999999999985 234689999987553 33457789999999999 99999999999999
Q ss_pred CCeeEEEEEccCCCChhHHhhhcC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCee
Q 002214 732 HNFKALVLEYMPKGSLEDCMYASN---------------FNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVL 796 (952)
Q Consensus 732 ~~~~~lv~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nil 796 (952)
++..++||||+++|+|.+++.... ..+++.+++.++.|++.||+|| |++||+||||||+||+
T Consensus 147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dlkp~NIl 223 (382)
T 3tt0_A 147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVL 223 (382)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEE
T ss_pred CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHH---HhCCEecCCCCcceEE
Confidence 999999999999999999997654 3589999999999999999999 7889999999999999
Q ss_pred eCCCCcEEEeccccccccCCcCcc-cccccccccccccccccCcCCcCcccchHhHHHHHHHHHh-CCCCCCccccCccc
Q 002214 797 LDDSMVAHLSDFGIAKLLSEEDSM-KQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFT-GMKPTNEFFTGEMS 874 (952)
Q Consensus 797 l~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~ 874 (952)
++.++.+||+|||+|+........ ......+|+.|+|||++.+..++.++|||||||++|||++ |..||......
T Consensus 224 l~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~--- 300 (382)
T 3tt0_A 224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE--- 300 (382)
T ss_dssp ECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH---
T ss_pred EcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH---
Confidence 999999999999999876543322 2233457889999999999999999999999999999999 99998652111
Q ss_pred hhhhhccchhhhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHH
Q 002214 875 IKRWINDSLPAVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLL 945 (952)
Q Consensus 875 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~ 945 (952)
. ....+...... ..+..+++++.+++.+||+.||++|||+.||+++|+++....
T Consensus 301 --~--------~~~~~~~~~~~-------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 354 (382)
T 3tt0_A 301 --E--------LFKLLKEGHRM-------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALT 354 (382)
T ss_dssp --H--------HHHHHHTTCCC-------CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred --H--------HHHHHHcCCCC-------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 1 11111111000 012346778999999999999999999999999999998654
No 81
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=1.2e-40 Score=383.04 Aligned_cols=258 Identities=25% Similarity=0.459 Sum_probs=213.7
Q ss_pred HHhccCCccceecCccceEEEEEEeCCCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEEE
Q 002214 661 RATDQFSEENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVLE 740 (952)
Q Consensus 661 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 740 (952)
...++|.+.+.||+|+||.||+|.+.+++.||||+++.... ..+.+.+|+.++++++||||+++++++. .+..++|||
T Consensus 185 i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e 262 (454)
T 1qcf_A 185 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM-SVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITE 262 (454)
T ss_dssp CCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEC
T ss_pred echHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCc-cHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEe
Confidence 34568999999999999999999998899999999975443 4578999999999999999999999987 567899999
Q ss_pred ccCCCChhHHhhhcC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcCc
Q 002214 741 YMPKGSLEDCMYASN-FNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEEDS 819 (952)
Q Consensus 741 ~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 819 (952)
|+++|+|.+++.... ..+++..+..++.|++.||+|| |+++|+||||||+|||++.++.+||+|||+|+.......
T Consensus 263 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~L---H~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~ 339 (454)
T 1qcf_A 263 FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFI---EQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY 339 (454)
T ss_dssp CCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHH---HHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHH
T ss_pred ecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH---HhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCce
Confidence 999999999997543 3588999999999999999999 788999999999999999999999999999987654333
Q ss_pred ccccccccccccccccccCcCCcCcccchHhHHHHHHHHHh-CCCCCCccccCccchhhhhccchhhhhhhccccccchh
Q 002214 820 MKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFT-GMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSED 898 (952)
Q Consensus 820 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 898 (952)
.......+++.|+|||++....++.++|||||||++|||+| |+.||......+ ....+.....
T Consensus 340 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~-------------~~~~i~~~~~--- 403 (454)
T 1qcf_A 340 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE-------------VIRALERGYR--- 403 (454)
T ss_dssp HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH-------------HHHHHHHTCC---
T ss_pred eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHH-------------HHHHHHcCCC---
Confidence 33334457889999999988899999999999999999999 999986532110 0011111100
Q ss_pred hHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHH
Q 002214 899 EEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRD 943 (952)
Q Consensus 899 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~ 943 (952)
...+..+++++.++|.+||+.||++|||+.+|++.|+++..
T Consensus 404 ----~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~ 444 (454)
T 1qcf_A 404 ----MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT 444 (454)
T ss_dssp ----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred ----CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence 01134578889999999999999999999999999987754
No 82
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.2e-40 Score=363.77 Aligned_cols=247 Identities=24% Similarity=0.387 Sum_probs=204.4
Q ss_pred hccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccC---chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQR---EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALV 738 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 738 (952)
.++|.+.+.||+|+||.||+|.+ .+|+.||||++.... ......+.+|+.+++.++||||+++++++..++..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 46899999999999999999997 578999999986432 22345789999999999999999999999999999999
Q ss_pred EEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcC
Q 002214 739 LEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEED 818 (952)
Q Consensus 739 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 818 (952)
|||+ +|+|.+++.... .+++.++..++.|++.||+|| |++||+||||||+||+++.++.+||+|||++.......
T Consensus 88 ~E~~-~g~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~~L---H~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~ 162 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYC---HRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN 162 (336)
T ss_dssp ECCC-CEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHH---HHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB
T ss_pred EECC-CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCc
Confidence 9999 788988887654 699999999999999999999 78899999999999999999999999999998765433
Q ss_pred cccccccccccccccccccCcCCc-CcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccch
Q 002214 819 SMKQTQTLATIGYIAPEYGREGQV-SIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSE 897 (952)
Q Consensus 819 ~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 897 (952)
. ....+||+.|+|||++.+..+ +.++||||+||++|+|++|+.||........ ... +....
T Consensus 163 ~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~-~~~------------i~~~~--- 224 (336)
T 3h4j_B 163 F--LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL-FKK------------VNSCV--- 224 (336)
T ss_dssp T--TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC-BCC------------CCSSC---
T ss_pred c--cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH-HHH------------HHcCC---
Confidence 2 234579999999999988775 7899999999999999999999965322110 000 00000
Q ss_pred hhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 898 DEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 898 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
...+..+++++.+++.+||+.||.+|||++|++++
T Consensus 225 -----~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 225 -----YVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp -----CCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred -----CCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 00123356789999999999999999999999865
No 83
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-40 Score=368.76 Aligned_cols=266 Identities=24% Similarity=0.427 Sum_probs=214.1
Q ss_pred HHhccCCccceecCccceEEEEEEeC------CCcEEEEEEeeccC-chhhHHHHHHHHHHHhCCCCccceeeeEeecCC
Q 002214 661 RATDQFSEENLIGIGSYGSVYKGRFP------DGIEVAIKVFHLQR-EGALNSFDAECEILKTIRHRNLVKIISSCTNHN 733 (952)
Q Consensus 661 ~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 733 (952)
...++|.+.+.||+|+||.||+|++. +++.||||+++... ....+.+.+|+.++++++||||+++++++.+.+
T Consensus 44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 123 (343)
T 1luf_A 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGK 123 (343)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC
Confidence 34578999999999999999999874 35899999997553 334567999999999999999999999999999
Q ss_pred eeEEEEEccCCCChhHHhhhcC-----------------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCC
Q 002214 734 FKALVLEYMPKGSLEDCMYASN-----------------------FNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDI 790 (952)
Q Consensus 734 ~~~lv~e~~~~g~L~~~l~~~~-----------------------~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dl 790 (952)
..++||||+++|+|.+++.... ..+++.+++.++.|+++||+|| |++||+||||
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~L---H~~~ivH~Dl 200 (343)
T 1luf_A 124 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYL---SERKFVHRDL 200 (343)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCC
T ss_pred ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCC
Confidence 9999999999999999997642 4689999999999999999999 7889999999
Q ss_pred CCCCeeeCCCCcEEEeccccccccCCcCcc-cccccccccccccccccCcCCcCcccchHhHHHHHHHHHh-CCCCCCcc
Q 002214 791 KPSNVLLDDSMVAHLSDFGIAKLLSEEDSM-KQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFT-GMKPTNEF 868 (952)
Q Consensus 791 k~~Nill~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~ 868 (952)
||+||+++.++.+||+|||+++........ ......+|+.|+|||.+.+..++.++||||||+++|||++ |..||...
T Consensus 201 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 280 (343)
T 1luf_A 201 ATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM 280 (343)
T ss_dssp SGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred CcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCC
Confidence 999999999999999999999876443321 2233568899999999988889999999999999999999 99998652
Q ss_pred ccCccchhhhhccchhhhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHHhhh
Q 002214 869 FTGEMSIKRWINDSLPAVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLLFAN 948 (952)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~~~~ 948 (952)
...+ ... .+.+.... ..+..+++++.+++.+||+.||++||++.|++++|+++.++....
T Consensus 281 ~~~~--~~~----------~~~~~~~~--------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~~~ 340 (343)
T 1luf_A 281 AHEE--VIY----------YVRDGNIL--------ACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAEGT 340 (343)
T ss_dssp CHHH--HHH----------HHHTTCCC--------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC-----
T ss_pred ChHH--HHH----------HHhCCCcC--------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhhhh
Confidence 2110 000 01111110 112356778999999999999999999999999999998776654
Q ss_pred c
Q 002214 949 I 949 (952)
Q Consensus 949 ~ 949 (952)
+
T Consensus 341 ~ 341 (343)
T 1luf_A 341 V 341 (343)
T ss_dssp -
T ss_pred c
Confidence 4
No 84
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=7.1e-40 Score=375.99 Aligned_cols=253 Identities=29% Similarity=0.455 Sum_probs=209.8
Q ss_pred HhccCCccceecCccceEEEEEEeCCCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEeecCC-eeEEEEE
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSCTNHN-FKALVLE 740 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e 740 (952)
..++|++.+.||+|+||.||+|.+ .|+.||||+++... ..+.+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e 267 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 267 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEE
T ss_pred ChHHeEEEeeecCcCCeeEEEEEe-cCCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEE
Confidence 356789999999999999999998 47899999987543 4578999999999999999999999987654 7899999
Q ss_pred ccCCCChhHHhhhcCC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcCc
Q 002214 741 YMPKGSLEDCMYASNF-NLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEEDS 819 (952)
Q Consensus 741 ~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 819 (952)
|+++|+|.+++...+. .+++..++.++.|+++||+|| |+++|+||||||+||+++.++.+||+|||+++......
T Consensus 268 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~L---H~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~- 343 (450)
T 1k9a_A 268 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL---EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ- 343 (450)
T ss_dssp CCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC----
T ss_pred ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccc-
Confidence 9999999999987654 379999999999999999999 78999999999999999999999999999998543221
Q ss_pred ccccccccccccccccccCcCCcCcccchHhHHHHHHHHHh-CCCCCCccccCccchhhhhccchhhhhhhccccccchh
Q 002214 820 MKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFT-GMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSED 898 (952)
Q Consensus 820 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 898 (952)
....+++.|+|||.+.+..++.++|||||||++|||+| |+.||......+. ... +....
T Consensus 344 ---~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~-~~~------------i~~~~---- 403 (450)
T 1k9a_A 344 ---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV-VPR------------VEKGY---- 403 (450)
T ss_dssp ------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTH-HHH------------HHTTC----
T ss_pred ---cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH-HHH------------HHcCC----
Confidence 22357889999999999999999999999999999999 9999875422210 100 00000
Q ss_pred hHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 002214 899 EEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDL 944 (952)
Q Consensus 899 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~ 944 (952)
....+..+++++.++|.+||+.||++|||+.|+++.|+++...
T Consensus 404 ---~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 404 ---KMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp ---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred ---CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 0112345788999999999999999999999999999988753
No 85
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=2.9e-40 Score=362.43 Aligned_cols=253 Identities=25% Similarity=0.351 Sum_probs=205.3
Q ss_pred hccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccCc-hhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEEE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQRE-GALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVLE 740 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 740 (952)
.++|++.+.||+|+||+||+|++. +++.||||++..... ...+.+.+|+.++++++||||+++++++.+++..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 468999999999999999999885 789999999865432 234568899999999999999999999999999999999
Q ss_pred ccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcCc-
Q 002214 741 YMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEEDS- 819 (952)
Q Consensus 741 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~- 819 (952)
|+++|+|.+++.... .+++.++..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++.+.....
T Consensus 86 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~L---H~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 86 YCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYL---HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp CCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred cCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 999999999886543 689999999999999999999 789999999999999999999999999999986543222
Q ss_pred ccccccccccccccccccCcCCc-CcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccchh
Q 002214 820 MKQTQTLATIGYIAPEYGREGQV-SIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSED 898 (952)
Q Consensus 820 ~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 898 (952)
.......||+.|+|||++.+..+ +.++|||||||++|||++|+.||.........+..+......
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~-------------- 227 (323)
T 3tki_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-------------- 227 (323)
T ss_dssp CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTT--------------
T ss_pred cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhccccc--------------
Confidence 12234579999999999877665 788999999999999999999997643332222222211100
Q ss_pred hHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 899 EEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 899 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
......++.++.+++.+||+.||++|||+.|++++
T Consensus 228 ----~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 228 ----LNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp ----STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ----CCccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 00113456778999999999999999999999764
No 86
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.7e-40 Score=371.05 Aligned_cols=260 Identities=24% Similarity=0.401 Sum_probs=211.0
Q ss_pred hccCCccceecCccceEEEEEEeC------CCcEEEEEEeecc-CchhhHHHHHHHHHHHhCCCCccceeeeEeecCCee
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP------DGIEVAIKVFHLQ-REGALNSFDAECEILKTIRHRNLVKIISSCTNHNFK 735 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 735 (952)
.++|++.+.||+|+||+||+|++. +++.||||+++.. .......+.+|+.++++++||||+++++++...+..
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 457899999999999999999852 4678999998644 233456788999999999999999999999999999
Q ss_pred EEEEEccCCCChhHHhhhcC------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCC---cEEEe
Q 002214 736 ALVLEYMPKGSLEDCMYASN------FNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSM---VAHLS 806 (952)
Q Consensus 736 ~lv~e~~~~g~L~~~l~~~~------~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~---~~kl~ 806 (952)
++||||+++|+|.+++.... ..+++.+++.++.|+++||+|| |++||+||||||+||+++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL---EENHFIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHH---HhCCeeCCCCChhhEEEecCCCCceEEEC
Confidence 99999999999999997643 3589999999999999999999 789999999999999999555 59999
Q ss_pred ccccccccCCcCc-ccccccccccccccccccCcCCcCcccchHhHHHHHHHHHh-CCCCCCccccCccchhhhhccchh
Q 002214 807 DFGIAKLLSEEDS-MKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFT-GMKPTNEFFTGEMSIKRWINDSLP 884 (952)
Q Consensus 807 Dfgla~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 884 (952)
|||+|+....... .......+|+.|+|||++.+..++.++|||||||++|||++ |..||...... ..
T Consensus 227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~--~~--------- 295 (367)
T 3l9p_A 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--EV--------- 295 (367)
T ss_dssp CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HH---------
T ss_pred CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HH---------
Confidence 9999986533222 22233567899999999988899999999999999999998 99998652111 01
Q ss_pred hhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHH
Q 002214 885 AVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLL 945 (952)
Q Consensus 885 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~ 945 (952)
...+..... ...+..++.++.+++.+||+.||++||++.||+++|+.+.+..
T Consensus 296 --~~~i~~~~~-------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 296 --LEFVTSGGR-------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp --HHHHHTTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred --HHHHHcCCC-------CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 111111000 0112346778999999999999999999999999999887653
No 87
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.3e-40 Score=377.40 Aligned_cols=262 Identities=18% Similarity=0.256 Sum_probs=211.5
Q ss_pred HHHHHHhccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccC---chhhHHHHHHHHHHHhCCCCccceeeeEeecC
Q 002214 657 DELLRATDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQR---EGALNSFDAECEILKTIRHRNLVKIISSCTNH 732 (952)
Q Consensus 657 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 732 (952)
.++....++|++.++||+|+||+||+|++. +++.||||+++... ......+.+|..++..++||||+++++++.++
T Consensus 67 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~ 146 (437)
T 4aw2_A 67 KQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDD 146 (437)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECS
T ss_pred hcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeC
Confidence 344455689999999999999999999985 58899999986432 22234588999999999999999999999999
Q ss_pred CeeEEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEecccccc
Q 002214 733 NFKALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAK 812 (952)
Q Consensus 733 ~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~ 812 (952)
+..|+||||+++|+|.+++......+++..+..++.|++.||+|| |++||+||||||+|||++.++.+||+|||+|+
T Consensus 147 ~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~L---H~~giiHrDLKp~NILl~~~g~vkL~DFGla~ 223 (437)
T 4aw2_A 147 NNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSV---HQLHYVHRDIKPDNILMDMNGHIRLADFGSCL 223 (437)
T ss_dssp SEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHH---HhCCeEecccCHHHeeEcCCCCEEEcchhhhh
Confidence 999999999999999999987666799999999999999999999 78999999999999999999999999999998
Q ss_pred ccCCcCcccccccccccccccccccC-----cCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhh
Q 002214 813 LLSEEDSMKQTQTLATIGYIAPEYGR-----EGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVM 887 (952)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 887 (952)
.............+||+.|+|||++. .+.++.++|||||||++|||++|+.||...... ..+.+..... .
T Consensus 224 ~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~-~~~~~i~~~~----~ 298 (437)
T 4aw2_A 224 KLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV-ETYGKIMNHK----E 298 (437)
T ss_dssp ECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHTHH----H
T ss_pred hcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChh-HHHHhhhhcc----c
Confidence 77554444444568999999999886 567899999999999999999999998652111 1111111000 0
Q ss_pred hhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCC--CCCHHHHHHH
Q 002214 888 NIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPEN--RVNTKEIISR 937 (952)
Q Consensus 888 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~ev~~~ 937 (952)
.. .. +.....+++++.+++++|+..+|++ ||++.|++++
T Consensus 299 ~~---~~--------p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 299 RF---QF--------PTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp HC---CC--------CSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred cc---cC--------CcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 00 00 0001235778999999999988888 9999999864
No 88
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.9e-40 Score=365.83 Aligned_cols=266 Identities=21% Similarity=0.341 Sum_probs=211.5
Q ss_pred HHhccCCccceecCccceEEEEEEe------CCCcEEEEEEeeccC-chhhHHHHHHHHHHHhC-CCCccceeeeEeecC
Q 002214 661 RATDQFSEENLIGIGSYGSVYKGRF------PDGIEVAIKVFHLQR-EGALNSFDAECEILKTI-RHRNLVKIISSCTNH 732 (952)
Q Consensus 661 ~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 732 (952)
...++|.+.+.||+|+||.||+|++ .+++.||||++.... ....+.+.+|+.+++++ +||||+++++++...
T Consensus 42 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 121 (344)
T 1rjb_A 42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLS 121 (344)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred cCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeC
Confidence 4567899999999999999999986 246789999986542 33457889999999999 899999999999999
Q ss_pred CeeEEEEEccCCCChhHHhhhcCC----------------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCC
Q 002214 733 NFKALVLEYMPKGSLEDCMYASNF----------------------NLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDI 790 (952)
Q Consensus 733 ~~~~lv~e~~~~g~L~~~l~~~~~----------------------~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dl 790 (952)
+..++||||+++|+|.+++..... .+++..++.++.|+++||+|| |++||+||||
T Consensus 122 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~~ivH~Di 198 (344)
T 1rjb_A 122 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFL---EFKSCVHRDL 198 (344)
T ss_dssp SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHH---HHTTEEETTC
T ss_pred CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHH---HhCCcccCCC
Confidence 999999999999999999976542 378999999999999999999 7899999999
Q ss_pred CCCCeeeCCCCcEEEeccccccccCCcCcc-cccccccccccccccccCcCCcCcccchHhHHHHHHHHHh-CCCCCCcc
Q 002214 791 KPSNVLLDDSMVAHLSDFGIAKLLSEEDSM-KQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFT-GMKPTNEF 868 (952)
Q Consensus 791 k~~Nill~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~ 868 (952)
||+||+++.++.+||+|||++......... ......+|+.|+|||.+.+..++.++|||||||++|||+| |..||...
T Consensus 199 kp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 278 (344)
T 1rjb_A 199 AARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI 278 (344)
T ss_dssp SGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred ChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccC
Confidence 999999999999999999999866443322 2233457889999999988899999999999999999998 99998663
Q ss_pred ccCccchhhhhccchhhhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHHhhh
Q 002214 869 FTGEMSIKRWINDSLPAVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLLFAN 948 (952)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~~~~ 948 (952)
.... ..... +...... ..+..+++++.+++.+||+.||++|||+.|++++|+.+.+...+.
T Consensus 279 ~~~~-~~~~~-----------~~~~~~~-------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~ 339 (344)
T 1rjb_A 279 PVDA-NFYKL-----------IQNGFKM-------DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEEA 339 (344)
T ss_dssp CCSH-HHHHH-----------HHTTCCC-------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC------
T ss_pred CcHH-HHHHH-----------HhcCCCC-------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHHHH
Confidence 2211 11111 1111000 012345778999999999999999999999999999987765543
No 89
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=9.3e-40 Score=359.05 Aligned_cols=252 Identities=21% Similarity=0.338 Sum_probs=207.0
Q ss_pred hccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccCch------hhHHHHHHHHHHHhCCCCccceeeeEeecCCee
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQREG------ALNSFDAECEILKTIRHRNLVKIISSCTNHNFK 735 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 735 (952)
.++|.+.+.||+|+||.||+|+.. +|+.||+|++...... ..+.+.+|+.++++++||||+++++++.+.+..
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 457999999999999999999984 6899999998654321 346789999999999999999999999999999
Q ss_pred EEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCC----cEEEeccccc
Q 002214 736 ALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSM----VAHLSDFGIA 811 (952)
Q Consensus 736 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~----~~kl~Dfgla 811 (952)
++||||+++|+|.+++... ..+++..+..++.|++.||+|| |++||+||||||+||+++.++ .+||+|||++
T Consensus 90 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~l---H~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 165 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYL---HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165 (326)
T ss_dssp EEEEECCCSCBHHHHHTTS-SCCBHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEEEcCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHH---HHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCC
Confidence 9999999999999998754 3699999999999999999999 789999999999999999887 8999999999
Q ss_pred cccCCcCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhcc
Q 002214 812 KLLSEEDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMD 891 (952)
Q Consensus 812 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 891 (952)
+....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+ ... .+..
T Consensus 166 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~-----------~~~~ 231 (326)
T 2y0a_A 166 HKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE-TLA-----------NVSA 231 (326)
T ss_dssp EECCTTSC--CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH-HHH-----------HHHH
T ss_pred eECCCCCc--cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH-HHH-----------HHHh
Confidence 87653322 234569999999999998899999999999999999999999985421110 000 0000
Q ss_pred ccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 892 TNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
..... .......++.++.+++.+||..||++|||+.|++++
T Consensus 232 ~~~~~-----~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 232 VNYEF-----EDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp TCCCC-----CHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred cCCCc-----CccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00000 011123457789999999999999999999999974
No 90
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=6.4e-40 Score=366.86 Aligned_cols=252 Identities=22% Similarity=0.289 Sum_probs=201.3
Q ss_pred HhccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccC---chhhHHHHHHHHHHHhC-CCCccceeeeEeecCCeeE
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQR---EGALNSFDAECEILKTI-RHRNLVKIISSCTNHNFKA 736 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 736 (952)
..++|++.+.||+|+||+||+|+.. +++.||+|+++... ....+.+.+|..++.++ +||||+++++++.+.+..|
T Consensus 50 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 129 (396)
T 4dc2_A 50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 129 (396)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE
Confidence 3468999999999999999999974 68899999997542 23345688999999887 8999999999999999999
Q ss_pred EEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCC
Q 002214 737 LVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSE 816 (952)
Q Consensus 737 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~ 816 (952)
+||||+++|+|..++...+ .+++..+..++.||+.||+|| |++||+||||||+|||++.++.+||+|||+|+....
T Consensus 130 lV~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~L---H~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 205 (396)
T 4dc2_A 130 FVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYL---HERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 205 (396)
T ss_dssp EEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEEcCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCEEeccCCHHHEEECCCCCEEEeecceeeeccc
Confidence 9999999999999887654 699999999999999999999 789999999999999999999999999999986332
Q ss_pred cCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhh-hcccccc
Q 002214 817 EDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMN-IMDTNLL 895 (952)
Q Consensus 817 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 895 (952)
.. ......+||+.|+|||++.+..++.++|||||||++|||++|+.||......+..... ....... +....
T Consensus 206 ~~-~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~----~~~~~~~~i~~~~-- 278 (396)
T 4dc2_A 206 PG-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQN----TEDYLFQVILEKQ-- 278 (396)
T ss_dssp TT-CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------C----CHHHHHHHHHHCC--
T ss_pred CC-CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchh----hHHHHHHHHhccc--
Confidence 22 2234467999999999999999999999999999999999999999643222111000 0000000 00000
Q ss_pred chhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCH
Q 002214 896 SEDEEHANVAKQSCASSVLSLAMECTSESPENRVNT 931 (952)
Q Consensus 896 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 931 (952)
...+..++.++.+++.+||+.||++||++
T Consensus 279 -------~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 279 -------IRIPRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp -------CCCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred -------cCCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 01233467789999999999999999996
No 91
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=3.8e-40 Score=362.61 Aligned_cols=258 Identities=24% Similarity=0.410 Sum_probs=205.4
Q ss_pred hccCCccceecCccceEEEEEEeC-CCc----EEEEEEeeccC-chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP-DGI----EVAIKVFHLQR-EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKA 736 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 736 (952)
.++|++.+.||+|+||+||+|++. +++ +||+|.++... ....+.+.+|+.++++++||||+++++++.+.. .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~ 92 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence 357999999999999999999863 444 46888775432 344578999999999999999999999998765 78
Q ss_pred EEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCC
Q 002214 737 LVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSE 816 (952)
Q Consensus 737 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~ 816 (952)
+|+||+++|+|.+++......+++..++.++.|+++||+|| |++||+||||||+||+++.++.+||+|||+|+....
T Consensus 93 ~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~L---H~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 169 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTT
T ss_pred EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---hhCCeeCCCCChheEEECCCCCEEEccCcceeEccC
Confidence 99999999999999988777899999999999999999999 788999999999999999999999999999987654
Q ss_pred cCcc-cccccccccccccccccCcCCcCcccchHhHHHHHHHHHh-CCCCCCccccCccchhhhhccchhhhhhhccccc
Q 002214 817 EDSM-KQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFT-GMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNL 894 (952)
Q Consensus 817 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 894 (952)
.... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+ .... +....
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~~-----------~~~~~ 236 (327)
T 3poz_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISSI-----------LEKGE 236 (327)
T ss_dssp TCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHH-----------HHTTC
T ss_pred CcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH--HHHH-----------HHcCC
Confidence 3322 2223457889999999999999999999999999999999 999986532211 1111 11110
Q ss_pred cchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 002214 895 LSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDL 944 (952)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~ 944 (952)
.. ..+..++.++.+++.+||+.||++||++.|++++|+++.+.
T Consensus 237 ~~-------~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 237 RL-------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp CC-------CCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred CC-------CCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 00 01234577899999999999999999999999999988654
No 92
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.5e-40 Score=372.64 Aligned_cols=261 Identities=21% Similarity=0.313 Sum_probs=209.7
Q ss_pred HHHHHHhccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccC---chhhHHHHHHHHHHHhCCCCccceeeeEeecC
Q 002214 657 DELLRATDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQR---EGALNSFDAECEILKTIRHRNLVKIISSCTNH 732 (952)
Q Consensus 657 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 732 (952)
.+.....++|++.+.||+|+||+||+|+.+ +|+.||||+++... ....+.+.+|..++.+++||||+++++++.+.
T Consensus 54 ~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~ 133 (412)
T 2vd5_A 54 KEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDE 133 (412)
T ss_dssp HHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECS
T ss_pred hhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeC
Confidence 344455688999999999999999999984 79999999986432 22345688999999999999999999999999
Q ss_pred CeeEEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEecccccc
Q 002214 733 NFKALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAK 812 (952)
Q Consensus 733 ~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~ 812 (952)
+..|+||||+++|+|.+++...+..+++..+..++.||+.||+|| |++||+||||||+|||++.++.+||+|||+|+
T Consensus 134 ~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~L---H~~giiHrDLKp~NILld~~g~vkL~DFGla~ 210 (412)
T 2vd5_A 134 NYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSV---HRLGYVHRDIKPDNILLDRCGHIRLADFGSCL 210 (412)
T ss_dssp SEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeecccCHHHeeecCCCCEEEeechhhe
Confidence 999999999999999999987666799999999999999999999 78999999999999999999999999999998
Q ss_pred ccCCcCcccccccccccccccccccC-------cCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhh
Q 002214 813 LLSEEDSMKQTQTLATIGYIAPEYGR-------EGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPA 885 (952)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~y~aPE~~~-------~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 885 (952)
.............+||+.|+|||++. ...++.++|||||||++|||++|+.||...... ..+.+.....
T Consensus 211 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~-~~~~~i~~~~--- 286 (412)
T 2vd5_A 211 KLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA-ETYGKIVHYK--- 286 (412)
T ss_dssp ECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHTHH---
T ss_pred eccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHH-HHHHHHHhcc---
Confidence 77554443334467999999999886 457899999999999999999999998652111 0111111000
Q ss_pred hhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCC---CCHHHHHHH
Q 002214 886 VMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENR---VNTKEIISR 937 (952)
Q Consensus 886 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---Ps~~ev~~~ 937 (952)
. ... ....+..+++++.+++.+||. +|++| |+++|+.+|
T Consensus 287 --~----~~~------~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 287 --E----HLS------LPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp --H----HCC------CC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred --c----CcC------CCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 0 000 000123467889999999999 99998 589998764
No 93
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=9.2e-40 Score=358.17 Aligned_cols=272 Identities=22% Similarity=0.371 Sum_probs=214.3
Q ss_pred CCccceecCccceEEEEEEeC-----CCcEEEEEEeeccC-chhhHHHHHHHHHHHhCCCCccceeeeEeecC--CeeEE
Q 002214 666 FSEENLIGIGSYGSVYKGRFP-----DGIEVAIKVFHLQR-EGALNSFDAECEILKTIRHRNLVKIISSCTNH--NFKAL 737 (952)
Q Consensus 666 ~~~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 737 (952)
|++.+.||+|+||+||+|.+. +++.||||+++... ....+.+.+|++++++++||||+++++++.+. ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 489999999999999998652 68899999997653 23456789999999999999999999999874 67899
Q ss_pred EEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCc
Q 002214 738 VLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEE 817 (952)
Q Consensus 738 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 817 (952)
||||+++|+|.+++.... +++..++.++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++.....
T Consensus 113 v~e~~~~~~L~~~l~~~~--~~~~~~~~i~~~l~~~l~~L---H~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 187 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYL---HAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 187 (318)
T ss_dssp EECCCTTCBHHHHGGGSC--CCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTT
T ss_pred EEecccCCcHHHHHhhCC--CCHHHHHHHHHHHHHHHHHH---HhCCccCCCCchheEEEcCCCCEEECCcccccccccc
Confidence 999999999999997654 89999999999999999999 7899999999999999999999999999999877543
Q ss_pred Ccc--cccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccch--hhhhhhcccc
Q 002214 818 DSM--KQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSL--PAVMNIMDTN 893 (952)
Q Consensus 818 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 893 (952)
... ......+|+.|+|||++.+..++.++||||||+++|||++|+.||............+..... ....+.+...
T Consensus 188 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (318)
T 3lxp_A 188 HEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERG 267 (318)
T ss_dssp CSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTT
T ss_pred ccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcc
Confidence 321 122345888999999999888999999999999999999999998653211111111110000 0111111111
Q ss_pred ccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHHhhhc
Q 002214 894 LLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLLFANI 949 (952)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~~~~~ 949 (952)
... ..+..+++++.+++.+||+.||++|||+.|+++.|+++.+++..+.
T Consensus 268 ~~~-------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~~~ 316 (318)
T 3lxp_A 268 ERL-------PRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQA 316 (318)
T ss_dssp CCC-------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC--
T ss_pred cCC-------CCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhccCC
Confidence 110 1234567889999999999999999999999999999999887654
No 94
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=4.9e-40 Score=381.55 Aligned_cols=256 Identities=25% Similarity=0.456 Sum_probs=214.3
Q ss_pred HhccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEEE
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVLE 740 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 740 (952)
..++|.+.+.||+|+||.||+|++. +++.||||+++.... ..+.|.+|+.++++++||||+++++++...+..++|||
T Consensus 218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 296 (495)
T 1opk_A 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 296 (495)
T ss_dssp CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEE
Confidence 3457889999999999999999985 488999999975433 35789999999999999999999999999999999999
Q ss_pred ccCCCChhHHhhhcC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcCc
Q 002214 741 YMPKGSLEDCMYASN-FNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEEDS 819 (952)
Q Consensus 741 ~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 819 (952)
|+++|+|.+++.... ..+++..++.++.|+++||+|| |+++|+||||||+|||++.++.+||+|||+++.......
T Consensus 297 ~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~L---H~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 373 (495)
T 1opk_A 297 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL---EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTY 373 (495)
T ss_dssp CCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCE
T ss_pred ccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCChhhEEECCCCcEEEeecccceeccCCce
Confidence 999999999998643 4689999999999999999999 789999999999999999999999999999997754443
Q ss_pred ccccccccccccccccccCcCCcCcccchHhHHHHHHHHHh-CCCCCCccccCccchhhhhccchhhhhhhccccccchh
Q 002214 820 MKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFT-GMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSED 898 (952)
Q Consensus 820 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 898 (952)
.......+++.|+|||++....++.++|||||||++|||++ |..||...... ... +.+.....
T Consensus 374 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~--~~~-----------~~~~~~~~--- 437 (495)
T 1opk_A 374 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVY-----------ELLEKDYR--- 437 (495)
T ss_dssp ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHH-----------HHHHTTCC---
T ss_pred eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH--HHH-----------HHHHcCCC---
Confidence 33344557889999999998899999999999999999999 99998653211 111 11111110
Q ss_pred hHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 002214 899 EEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKI 941 (952)
Q Consensus 899 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i 941 (952)
...+..+++++.++|.+||+.||++|||+.||++.|+.+
T Consensus 438 ----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~ 476 (495)
T 1opk_A 438 ----MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 476 (495)
T ss_dssp ----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred ----CCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 012345788899999999999999999999999999875
No 95
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=3.7e-40 Score=356.07 Aligned_cols=268 Identities=22% Similarity=0.353 Sum_probs=203.8
Q ss_pred ccCCccceecCccceEEEEEEeCCCcEEEEEEeeccCc--hhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEEEc
Q 002214 664 DQFSEENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQRE--GALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVLEY 741 (952)
Q Consensus 664 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 741 (952)
++|++.+.||+|+||+||+|+..+|+.||+|++..... ...+.+.+|++++++++||||+++++++..++..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 57899999999999999999998899999999865432 2346788999999999999999999999999999999999
Q ss_pred cCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcCccc
Q 002214 742 MPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEEDSMK 821 (952)
Q Consensus 742 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 821 (952)
+++ +|.+++......+++..+..++.|+++||+|| |++||+||||||+||+++.++.+||+|||+++...... ..
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~ 156 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC---HDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV-RK 156 (288)
T ss_dssp CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEEcCCCCEEEeECccccccCccc-cc
Confidence 975 99998887767899999999999999999999 78999999999999999999999999999998764322 12
Q ss_pred ccccccccccccccccCc-CCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhc---cc----hhhhhh--hcc
Q 002214 822 QTQTLATIGYIAPEYGRE-GQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWIN---DS----LPAVMN--IMD 891 (952)
Q Consensus 822 ~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~---~~----~~~~~~--~~~ 891 (952)
.....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||......+ ...+... .. .+.... .++
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T 1ob3_A 157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD-QLMRIFRILGTPNSKNWPNVTELPKYD 235 (288)
T ss_dssp -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGSTTCC
T ss_pred cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHHCCCChhhchhhhcccccc
Confidence 233568999999998865 458999999999999999999999986532111 1111100 00 000000 000
Q ss_pred ccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 892 TNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
.......+.........+++++.+++.+||+.||++|||++|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp TTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0000000000001123457789999999999999999999999864
No 96
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=9.9e-40 Score=355.88 Aligned_cols=256 Identities=26% Similarity=0.404 Sum_probs=202.5
Q ss_pred hccCCccceecCccceEEEEEEeCCCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEEEcc
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVLEYM 742 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 742 (952)
.++|++.+.||+|+||+||+|++ .++.||||++... ...+.+.+|++++++++||||+++++++.+ ..++||||+
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~ 81 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYA 81 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEE-TTEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECC
T ss_pred HhHeeeeeEeecCCCceEEEEEE-CCeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcC
Confidence 35788999999999999999998 5789999998643 345788999999999999999999998874 478999999
Q ss_pred CCCChhHHhhhcCC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCc-EEEeccccccccCCcCc
Q 002214 743 PKGSLEDCMYASNF--NLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMV-AHLSDFGIAKLLSEEDS 819 (952)
Q Consensus 743 ~~g~L~~~l~~~~~--~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~-~kl~Dfgla~~~~~~~~ 819 (952)
++|+|.+++..... .+++..++.++.|+++||+|||..|.+||+||||||+||+++.++. +||+|||++......
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~-- 159 (307)
T 2eva_A 82 EGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH-- 159 (307)
T ss_dssp TTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---------
T ss_pred CCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc--
Confidence 99999999976543 4789999999999999999997555589999999999999998886 799999999865322
Q ss_pred ccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccchhh
Q 002214 820 MKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSEDE 899 (952)
Q Consensus 820 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 899 (952)
.....||+.|+|||++.+..++.++||||||+++|||++|+.||............. ... ...
T Consensus 160 --~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~----------~~~-~~~---- 222 (307)
T 2eva_A 160 --MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWA----------VHN-GTR---- 222 (307)
T ss_dssp -------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHH----------HHT-TCC----
T ss_pred --cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHH----------Hhc-CCC----
Confidence 123458999999999998899999999999999999999999987532221110000 000 000
Q ss_pred HHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHH
Q 002214 900 EHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLL 945 (952)
Q Consensus 900 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~ 945 (952)
...+..++.++.+++.+||+.||++|||+.|+++.|+++.+.+
T Consensus 223 ---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 265 (307)
T 2eva_A 223 ---PPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYF 265 (307)
T ss_dssp ---CCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGC
T ss_pred ---CCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhc
Confidence 0012345778999999999999999999999999999987654
No 97
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=9.8e-40 Score=351.55 Aligned_cols=260 Identities=22% Similarity=0.390 Sum_probs=209.2
Q ss_pred HhccCCccceecCccceEEEEEEeCC----CcEEEEEEeeccC-chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeE
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRFPD----GIEVAIKVFHLQR-EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKA 736 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 736 (952)
..++|.+.+.||+|+||+||+|++.+ +..||+|++.... ....+.+.+|+.++++++||||+++++++.++ ..+
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~ 88 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTW 88 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCE
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCE
Confidence 35689999999999999999998632 3469999987553 33457789999999999999999999998754 568
Q ss_pred EEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCC
Q 002214 737 LVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSE 816 (952)
Q Consensus 737 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~ 816 (952)
+||||+++++|.+++......+++..+..++.|+++||+|| |++||+||||||+||+++.++.+||+|||++.....
T Consensus 89 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 165 (281)
T 3cc6_A 89 IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYL---ESINCVHRDIAVRNILVASPECVKLGDFGLSRYIED 165 (281)
T ss_dssp EEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC--
T ss_pred EEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCccceEEECCCCcEEeCccCCCccccc
Confidence 99999999999999988777799999999999999999999 789999999999999999999999999999987655
Q ss_pred cCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHh-CCCCCCccccCccchhhhhccchhhhhhhcccccc
Q 002214 817 EDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFT-GMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLL 895 (952)
Q Consensus 817 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 895 (952)
..........+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+ ....+ .....
T Consensus 166 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~--~~~~~-----------~~~~~ 232 (281)
T 3cc6_A 166 EDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD--VIGVL-----------EKGDR 232 (281)
T ss_dssp -------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG--HHHHH-----------HHTCC
T ss_pred ccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH--HHHHH-----------hcCCC
Confidence 44333344567889999999988889999999999999999998 999986422211 11100 00000
Q ss_pred chhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHH
Q 002214 896 SEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLL 945 (952)
Q Consensus 896 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~ 945 (952)
...+..+++++.+++.+||+.||++||++.|++++|+++.+.-
T Consensus 233 -------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 275 (281)
T 3cc6_A 233 -------LPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME 275 (281)
T ss_dssp -------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -------CCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhh
Confidence 0012345778999999999999999999999999999987653
No 98
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=6.3e-40 Score=352.70 Aligned_cols=262 Identities=24% Similarity=0.444 Sum_probs=214.2
Q ss_pred HHhccCCccceecCccceEEEEEEeCCCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEEE
Q 002214 661 RATDQFSEENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVLE 740 (952)
Q Consensus 661 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 740 (952)
...++|++.+.||+|+||.||+|...+++.||||+++.... ..+.+.+|++++++++||||+++++++.. +..++|||
T Consensus 10 v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e 87 (279)
T 1qpc_A 10 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITE 87 (279)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred cCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc-cHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEe
Confidence 34578999999999999999999998888999999865433 34678999999999999999999999874 45899999
Q ss_pred ccCCCChhHHhhhcC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcCc
Q 002214 741 YMPKGSLEDCMYASN-FNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEEDS 819 (952)
Q Consensus 741 ~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 819 (952)
|+++++|.+++.... ..+++..+..++.|+++||+|| |++||+||||||+||++++++.+||+|||++........
T Consensus 88 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 164 (279)
T 1qpc_A 88 YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI---EERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY 164 (279)
T ss_dssp CCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE
T ss_pred cCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCCHhhEEEcCCCCEEECCCcccccccCccc
Confidence 999999999987542 2589999999999999999999 789999999999999999999999999999987755443
Q ss_pred ccccccccccccccccccCcCCcCcccchHhHHHHHHHHHh-CCCCCCccccCccchhhhhccchhhhhhhccccccchh
Q 002214 820 MKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFT-GMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSED 898 (952)
Q Consensus 820 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 898 (952)
.......+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+ .. ..+.....
T Consensus 165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~-----------~~~~~~~~--- 228 (279)
T 1qpc_A 165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE--VI-----------QNLERGYR--- 228 (279)
T ss_dssp ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HH-----------HHHHTTCC---
T ss_pred ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHH--HH-----------HHHhcccC---
Confidence 33344557889999999988889999999999999999999 899986521110 00 00000000
Q ss_pred hHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHHhh
Q 002214 899 EEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLLFA 947 (952)
Q Consensus 899 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~~~ 947 (952)
...+..+++++.+++.+||+.||++|||+.++++.|+++......
T Consensus 229 ----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~ 273 (279)
T 1qpc_A 229 ----MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEG 273 (279)
T ss_dssp ----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC--
T ss_pred ----CCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhccC
Confidence 001234577899999999999999999999999999999876543
No 99
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.1e-39 Score=352.52 Aligned_cols=253 Identities=26% Similarity=0.470 Sum_probs=205.7
Q ss_pred hccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccCch-------hhHHHHHHHHHHHhCCCCccceeeeEeecCCe
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQREG-------ALNSFDAECEILKTIRHRNLVKIISSCTNHNF 734 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 734 (952)
.++|++.+.||+|+||+||+|++ .+++.||+|++...... ..+.+.+|++++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 46799999999999999999988 57899999998644321 1267899999999999999999999997665
Q ss_pred eEEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeCCCCCCCeeeCCCCc-----EEEec
Q 002214 735 KALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNP--IVHCDIKPSNVLLDDSMV-----AHLSD 807 (952)
Q Consensus 735 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~--ivH~Dlk~~Nill~~~~~-----~kl~D 807 (952)
++||||+++|+|.+.+......+++..++.++.|++.|++|| |++| |+||||||+||+++.++. +||+|
T Consensus 97 -~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l---H~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~D 172 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYM---QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVAD 172 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHH---HTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECC
T ss_pred -eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHH---HhCCCCeecCCCCcceEEEeccCCCCceeEEeCC
Confidence 699999999999998887777899999999999999999999 6778 999999999999988776 99999
Q ss_pred cccccccCCcCccccccccccccccccccc--CcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhh
Q 002214 808 FGIAKLLSEEDSMKQTQTLATIGYIAPEYG--REGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPA 885 (952)
Q Consensus 808 fgla~~~~~~~~~~~~~~~~~~~y~aPE~~--~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 885 (952)
||+++.... ......||+.|+|||++ ....++.++|||||||++|||++|+.||..............
T Consensus 173 fg~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~------ 242 (287)
T 4f0f_A 173 FGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMI------ 242 (287)
T ss_dssp CTTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHH------
T ss_pred CCccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHH------
Confidence 999985432 22345699999999988 445678999999999999999999999976433221111110
Q ss_pred hhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 002214 886 VMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKI 941 (952)
Q Consensus 886 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i 941 (952)
...... ...+..+++++.+++.+||+.||++|||+.|+++.|+++
T Consensus 243 ----~~~~~~-------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 243 ----REEGLR-------PTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp ----HHSCCC-------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred ----hccCCC-------CCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 000000 011245678899999999999999999999999999753
No 100
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=2.5e-40 Score=366.19 Aligned_cols=250 Identities=24% Similarity=0.308 Sum_probs=201.5
Q ss_pred HhccCCccceecCccceEEEEEEeC-CCcEEEEEEeecc---CchhhHHHHHHHHHHHhC-CCCccceeeeEeecCCeeE
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQ---REGALNSFDAECEILKTI-RHRNLVKIISSCTNHNFKA 736 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 736 (952)
..++|++.+.||+|+||+||+|+.. +|+.||||+++.. .....+.+.+|..+++.+ +||||+++++++.+.+..|
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 4578999999999999999999874 6899999999754 223446688999999998 7999999999999999999
Q ss_pred EEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCC
Q 002214 737 LVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSE 816 (952)
Q Consensus 737 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~ 816 (952)
+||||+++|+|.+++...+ .+++..+..++.|++.||+|| |++||+||||||+|||++.++.+||+|||+|+....
T Consensus 101 lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~L---H~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~ 176 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQKSR-RFDEARARFYAAEIISALMFL---HDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC 176 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred EEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCCcccCCCHHHEEECCCCCEEEccccceeeccc
Confidence 9999999999999987654 699999999999999999999 789999999999999999999999999999986432
Q ss_pred cCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccc
Q 002214 817 EDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLS 896 (952)
Q Consensus 817 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 896 (952)
.. ......+||+.|+|||++.+..++.++||||+||++|||++|+.||...... ..+.. +.....
T Consensus 177 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-~~~~~-----------i~~~~~-- 241 (353)
T 3txo_A 177 NG-VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED-DLFEA-----------ILNDEV-- 241 (353)
T ss_dssp ----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHH-----------HHHCCC--
T ss_pred CC-ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH-HHHHH-----------HHcCCC--
Confidence 22 2233467999999999999888999999999999999999999998652111 00111 111111
Q ss_pred hhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCH------HHHHHH
Q 002214 897 EDEEHANVAKQSCASSVLSLAMECTSESPENRVNT------KEIISR 937 (952)
Q Consensus 897 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~ev~~~ 937 (952)
..+..+++++.+++.+||..||++||++ .|+++|
T Consensus 242 -------~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~h 281 (353)
T 3txo_A 242 -------VYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRH 281 (353)
T ss_dssp -------CCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTS
T ss_pred -------CCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhC
Confidence 0123356779999999999999999998 777653
No 101
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.2e-39 Score=373.51 Aligned_cols=347 Identities=21% Similarity=0.227 Sum_probs=198.1
Q ss_pred eEEcccCcccccCCccccCCCCCcEEEccCCcccccCCccccccCCccEEEeeCCcCCccCchhhhccCCCcEeeecccc
Q 002214 159 GLYVSYNQFKGPIPNNLWHCKELSSVSLSYNQFTGRLPRDLGNSTKLKSLDLGFNNLNGEIPQEIGNLRNLEILGIDQSN 238 (952)
Q Consensus 159 ~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~ 238 (952)
.++.++++++ .+|..+. ++++.|+|++|++++..+..|.++++|++|+|++|.+++..|..|.++++|+.|+|++|+
T Consensus 15 ~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 15 AVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp EEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 3444444444 3343332 345555555555554445555555555555555555554445555555555555555555
Q ss_pred ccccCCccccCCCCccEEEeeCccccccCCCCcccCCCCCcceEEcccCcCCCCCCcccccchhhhhhhccccCcccccc
Q 002214 239 LVGFVPDTIFNISTLKILSLFNNTLSGNLPSSKNLIGLPNLEGLNLGLNNLSGSIPSFFFNASKLYALELGYNSNLKRLG 318 (952)
Q Consensus 239 ~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l~l~~~~~L~~L~ 318 (952)
+..+.+..|.++++|++|+|++|++.+..+. .+..
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~--~~~~------------------------------------------- 126 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDY--MFQD------------------------------------------- 126 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECTT--TTTT-------------------------------------------
T ss_pred CCccCcccccCCCCCCEEECCCCccccCChh--Hccc-------------------------------------------
Confidence 4444444444444444444444444433221 1233
Q ss_pred ccCcceeechhhHHHHHHHhhccccccccCCCcccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCccccCCC
Q 002214 319 LERNYLTFSTSELMSLFSALVNCKSLKIGNLINLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFS 398 (952)
Q Consensus 319 L~~n~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~ 398 (952)
+++|++|++++|.+++..+..|..+++|++|++++|.+++..+..|.+++
T Consensus 127 ------------------------------l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~ 176 (477)
T 2id5_A 127 ------------------------------LYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLH 176 (477)
T ss_dssp ------------------------------CTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCT
T ss_pred ------------------------------cccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccC
Confidence 33444444444444444444455555555555555555544444455555
Q ss_pred cceEEEeccccccccCCCccCCCCCCcEEeccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecC
Q 002214 399 RLYVVYLNRNKLSGSIPSCLGDLNSLRILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLS 478 (952)
Q Consensus 399 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 478 (952)
+|+.|+|++|.+.+..+..|..+++|+.|++++|.+.+..+.......+|+.|++++|+++...+..|..+++|+.|+|+
T Consensus 177 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls 256 (477)
T 2id5_A 177 GLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLS 256 (477)
T ss_dssp TCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECC
T ss_pred CCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECC
Confidence 55555555555554445555555566666666555544444444444566666666666665444566777777777777
Q ss_pred CcccCCCCcccccCCCCCceEEccCccccCcccccccccccccEEeCCCCcccccCccchhcccccccccccccccccCC
Q 002214 479 RNNLSGNIPSTIIGLKNLQHLSLEHNKLQGPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFNKLVGEI 558 (952)
Q Consensus 479 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 558 (952)
+|++++..+..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|++++|+|.|.+
T Consensus 257 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c 336 (477)
T 2id5_A 257 YNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDC 336 (477)
T ss_dssp SSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSG
T ss_pred CCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCcc
Confidence 77777666677777777777777777777777777777777777777777777766667777777777777777777776
Q ss_pred CCCCCcccccccccccCccCCCCCc
Q 002214 559 PRGGAFANFSAESFIGNDLLCGSPY 583 (952)
Q Consensus 559 p~~~~~~~~~~~~~~~n~~~c~~p~ 583 (952)
+....+.+.....+.++...|+.|.
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~C~~p~ 361 (477)
T 2id5_A 337 RLLWVFRRRWRLNFNRQQPTCATPE 361 (477)
T ss_dssp GGHHHHTTTTSSCCTTCCCBEEESG
T ss_pred chHhHHhhhhccccCccCceeCCch
Confidence 5432222333344566667776663
No 102
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-39 Score=364.44 Aligned_cols=253 Identities=19% Similarity=0.307 Sum_probs=209.5
Q ss_pred hccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEEEc
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVLEY 741 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 741 (952)
.++|.+.+.||+|+||.||+|... +|+.||+|++..........+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 467999999999999999999884 6899999999766555556889999999999999999999999999999999999
Q ss_pred cCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCC--CCcEEEeccccccccCCcCc
Q 002214 742 MPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDD--SMVAHLSDFGIAKLLSEEDS 819 (952)
Q Consensus 742 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~--~~~~kl~Dfgla~~~~~~~~ 819 (952)
+++|+|.+++......+++..+..++.|++.||+|| |++||+||||||+||+++. ++.+||+|||+|+.......
T Consensus 130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~ 206 (387)
T 1kob_A 130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHM---HEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI 206 (387)
T ss_dssp CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC
T ss_pred CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH---HhCCeeecccchHHeEEecCCCCceEEEecccceecCCCcc
Confidence 999999999987766799999999999999999999 7899999999999999974 57899999999987654332
Q ss_pred ccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccchhh
Q 002214 820 MKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSEDE 899 (952)
Q Consensus 820 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 899 (952)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ....... .......
T Consensus 207 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~-~~~~~i~-----------~~~~~~~-- 270 (387)
T 1kob_A 207 --VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL-ETLQNVK-----------RCDWEFD-- 270 (387)
T ss_dssp --EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHHHHHH-----------HCCCCCC--
T ss_pred --eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH-HHHHHHH-----------hCCCCCC--
Confidence 22346999999999999989999999999999999999999998652110 0001000 0000000
Q ss_pred HHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 900 EHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 900 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
......+++++.+++.+||..||++|||+.|++++
T Consensus 271 ---~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 271 ---EDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp ---SSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred ---ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 00113457789999999999999999999999875
No 103
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=371.49 Aligned_cols=255 Identities=19% Similarity=0.273 Sum_probs=206.6
Q ss_pred HHhccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccC--chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEE
Q 002214 661 RATDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQR--EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKAL 737 (952)
Q Consensus 661 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 737 (952)
...++|++.+.||+|+||+||+|.. .+|+.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 87 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL 87 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence 3467899999999999999999987 478999999987553 2334678999999999999999999999999999999
Q ss_pred EEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeC---CCCcEEEecccccccc
Q 002214 738 VLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLD---DSMVAHLSDFGIAKLL 814 (952)
Q Consensus 738 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~---~~~~~kl~Dfgla~~~ 814 (952)
||||+++|+|.+.+.... .+++..+..++.|++.||+|| |++||+||||||+||+++ .++.+||+|||+|+..
T Consensus 88 v~E~~~gg~L~~~i~~~~-~~~e~~~~~i~~qil~aL~~l---H~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~ 163 (444)
T 3soa_A 88 IFDLVTGGELFEDIVARE-YYSEADASHCIQQILEAVLHC---HQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEV 163 (444)
T ss_dssp EECCCBCCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCC
T ss_pred EEEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEe
Confidence 999999999999887654 699999999999999999999 789999999999999998 5688999999999876
Q ss_pred CCcCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccc
Q 002214 815 SEEDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNL 894 (952)
Q Consensus 815 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 894 (952)
..... ......||+.|+|||++.+..++.++||||+||++|+|++|..||...... ..+... .....
T Consensus 164 ~~~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~-~~~~~i-----------~~~~~ 230 (444)
T 3soa_A 164 EGEQQ-AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH-RLYQQI-----------KAGAY 230 (444)
T ss_dssp CTTCC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHH-----------HHTCC
T ss_pred cCCCc-eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH-HHHHHH-----------HhCCC
Confidence 54322 223467999999999999989999999999999999999999998552110 001110 00000
Q ss_pred cchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 895 LSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
.... .....+++++.+++.+||+.||++|||+.|++++
T Consensus 231 ~~~~-----~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 231 DFPS-----PEWDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp CCCT-----TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCc-----cccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0000 0113457789999999999999999999999874
No 104
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.8e-39 Score=356.32 Aligned_cols=274 Identities=22% Similarity=0.315 Sum_probs=210.0
Q ss_pred hccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccC-chhhHHHHHHHHHHHhCCCCccceeeeEeecCC--eeEEE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQR-EGALNSFDAECEILKTIRHRNLVKIISSCTNHN--FKALV 738 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv 738 (952)
.++|.+.+.||+|+||+||+|++. +|+.||||++.... ....+.+.+|++++++++||||+++++++.... ..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence 357999999999999999999985 58999999986543 233567889999999999999999999987654 77999
Q ss_pred EEccCCCChhHHhhhcCC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeee----CCCCcEEEecccccc
Q 002214 739 LEYMPKGSLEDCMYASNF--NLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLL----DDSMVAHLSDFGIAK 812 (952)
Q Consensus 739 ~e~~~~g~L~~~l~~~~~--~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill----~~~~~~kl~Dfgla~ 812 (952)
|||+++|+|.+++..... .+++.+++.++.|++.||+|| |++||+||||||+||++ +.++.+||+|||+|+
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~ 164 (319)
T 4euu_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL---RENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (319)
T ss_dssp EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHH---HHCCEecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence 999999999999976432 489999999999999999999 78999999999999999 888899999999998
Q ss_pred ccCCcCcccccccccccccccccccC--------cCCcCcccchHhHHHHHHHHHhCCCCCCccccCccch---hhhhcc
Q 002214 813 LLSEEDSMKQTQTLATIGYIAPEYGR--------EGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSI---KRWIND 881 (952)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~y~aPE~~~--------~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~---~~~~~~ 881 (952)
....... .....||+.|+|||++. +..++.++|||||||++|||++|+.||.......... .+....
T Consensus 165 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 242 (319)
T 4euu_A 165 ELEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242 (319)
T ss_dssp ECCTTCC--BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHH
T ss_pred ecCCCCc--eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcC
Confidence 7654332 23456999999999875 5678999999999999999999999996533222111 111111
Q ss_pred chhhhhhhccc----cccc-hhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 002214 882 SLPAVMNIMDT----NLLS-EDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKI 941 (952)
Q Consensus 882 ~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i 941 (952)
..+.....+.. .... ............+++.+.+++.+||+.||++|||++|++++..+.
T Consensus 243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~ 307 (319)
T 4euu_A 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (319)
T ss_dssp CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred CCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence 00000000000 0000 000000012345678899999999999999999999999998753
No 105
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.4e-39 Score=361.45 Aligned_cols=253 Identities=21% Similarity=0.311 Sum_probs=205.5
Q ss_pred hccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccC-----chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQR-----EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKA 736 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 736 (952)
.++|++.+.||+|+||+||+|.+ .+|+.||||++.... ....+.+.+|+.++++++||||+++++++.+++..|
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 46799999999999999999987 468999999986432 113567899999999999999999999999999999
Q ss_pred EEEEccCCCChhHHhhhc---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCc---EEEecccc
Q 002214 737 LVLEYMPKGSLEDCMYAS---NFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMV---AHLSDFGI 810 (952)
Q Consensus 737 lv~e~~~~g~L~~~l~~~---~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~---~kl~Dfgl 810 (952)
+||||+++|+|.+.+... ...+++..+..++.|+++||+|| |++||+||||||+||+++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~l---H~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYC---HDNNIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHH---HHCCceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 999999999998877543 23589999999999999999999 7899999999999999986654 99999999
Q ss_pred ccccCCcCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhc
Q 002214 811 AKLLSEEDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIM 890 (952)
Q Consensus 811 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 890 (952)
++....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.... +..... +.
T Consensus 180 a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~--~~~~~~-----------i~ 245 (351)
T 3c0i_A 180 AIQLGESGL-VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK--ERLFEG-----------II 245 (351)
T ss_dssp CEECCTTSC-BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH--HHHHHH-----------HH
T ss_pred eeEecCCCe-eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH--HHHHHH-----------HH
Confidence 987654322 2334579999999999998899999999999999999999999986521 100111 11
Q ss_pred cccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 891 DTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
....... ......+++++.+++.+||+.||++|||+.|++++
T Consensus 246 ~~~~~~~-----~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 246 KGKYKMN-----PRQWSHISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp HTCCCCC-----HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cCCCCCC-----ccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1111000 01123457789999999999999999999999864
No 106
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=6.9e-40 Score=356.81 Aligned_cols=267 Identities=23% Similarity=0.415 Sum_probs=210.9
Q ss_pred hccCCccceecCccceEEEEEEe-----CCCcEEEEEEeeccC-chhhHHHHHHHHHHHhCCCCccceeeeEeecC--Ce
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRF-----PDGIEVAIKVFHLQR-EGALNSFDAECEILKTIRHRNLVKIISSCTNH--NF 734 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~ 734 (952)
.+.|++.+.||+|+||.||+|++ .+++.||||+++... ....+.+.+|++++++++||||+++++++... ..
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 99 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 99 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce
Confidence 34689999999999999999983 468999999987543 33457789999999999999999999999876 66
Q ss_pred eEEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEecccccccc
Q 002214 735 KALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLL 814 (952)
Q Consensus 735 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~ 814 (952)
.++||||+++|+|.+++......+++..++.++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++..
T Consensus 100 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 176 (302)
T 4e5w_A 100 IKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL---GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI 176 (302)
T ss_dssp EEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHh---hcCCcccCCCchheEEEcCCCCEEECcccccccc
Confidence 8999999999999999977777899999999999999999999 7899999999999999999999999999999877
Q ss_pred CCcCc--ccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccc-----hhhhh
Q 002214 815 SEEDS--MKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDS-----LPAVM 887 (952)
Q Consensus 815 ~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~-----~~~~~ 887 (952)
..... .......+|..|+|||.+.+..++.++||||+|+++|||++|+.|+...... ........ .....
T Consensus 177 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~ 253 (302)
T 4e5w_A 177 ETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMAL---FLKMIGPTHGQMTVTRLV 253 (302)
T ss_dssp CTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH---HHHHHCSCCGGGHHHHHH
T ss_pred cCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhH---HhhccCCcccccCHHHHH
Confidence 54432 2223356888999999998888999999999999999999999986432110 00000000 00011
Q ss_pred hhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 002214 888 NIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIR 942 (952)
Q Consensus 888 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~ 942 (952)
..+.... ....+..+++++.+++.+||+.||++|||+.|+++.|+++.
T Consensus 254 ~~~~~~~-------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 254 NTLKEGK-------RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHHHTTC-------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHhccC-------CCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 1111100 00123456788999999999999999999999999999875
No 107
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=2.4e-40 Score=372.43 Aligned_cols=258 Identities=22% Similarity=0.290 Sum_probs=208.9
Q ss_pred HHHHHhccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccC---chhhHHHHHHHHHHHhCCCCccceeeeEeecCC
Q 002214 658 ELLRATDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQR---EGALNSFDAECEILKTIRHRNLVKIISSCTNHN 733 (952)
Q Consensus 658 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 733 (952)
++....++|.+.+.||+|+||+||+|+.. +++.||+|+++... ....+.+.+|+.+++.++||||+++++++.+++
T Consensus 63 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 142 (410)
T 3v8s_A 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 142 (410)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECC
Confidence 34455678999999999999999999985 58999999986432 222355889999999999999999999999999
Q ss_pred eeEEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccc
Q 002214 734 FKALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKL 813 (952)
Q Consensus 734 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~ 813 (952)
..|+||||+++|+|.+++... .+++..+..++.|++.||+|| |++||+||||||+|||++.++.+||+|||+|+.
T Consensus 143 ~~~lV~E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~L---H~~givHrDLKp~NILl~~~g~ikL~DFG~a~~ 217 (410)
T 3v8s_A 143 YLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAI---HSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMK 217 (410)
T ss_dssp EEEEEECCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHH---HHCCeEeccCCHHHeeECCCCCEEEeccceeEe
Confidence 999999999999999988764 589999999999999999999 789999999999999999999999999999987
Q ss_pred cCCcCcccccccccccccccccccCcCC----cCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhh
Q 002214 814 LSEEDSMKQTQTLATIGYIAPEYGREGQ----VSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNI 889 (952)
Q Consensus 814 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~----~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 889 (952)
............+||+.|+|||++.+.. ++.++|||||||++|||++|+.||..... ...+.++..... .
T Consensus 218 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~-~~~~~~i~~~~~----~- 291 (410)
T 3v8s_A 218 MNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL-VGTYSKIMNHKN----S- 291 (410)
T ss_dssp CCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSH-HHHHHHHHTHHH----H-
T ss_pred eccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCCh-hhHHHHHHhccc----c-
Confidence 7654443444578999999999887654 78999999999999999999999864211 001111110000 0
Q ss_pred ccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCC--CCCHHHHHHH
Q 002214 890 MDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPEN--RVNTKEIISR 937 (952)
Q Consensus 890 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~ev~~~ 937 (952)
.. . .....+++++.+++.+||..+|.+ ||++.||++|
T Consensus 292 ----~~--~-----p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 292 ----LT--F-----PDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp ----CC--C-----CTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred ----cc--C-----CCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 00 0 001235778999999999999998 9999999875
No 108
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.4e-39 Score=355.70 Aligned_cols=279 Identities=24% Similarity=0.357 Sum_probs=205.7
Q ss_pred HHHHhccCCccceecCccceEEEEEEeCCCcEEEEEEeeccCchhhHHHHHHHHHHHhC--CCCccceeeeEeecC----
Q 002214 659 LLRATDQFSEENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQREGALNSFDAECEILKTI--RHRNLVKIISSCTNH---- 732 (952)
Q Consensus 659 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~---- 732 (952)
.....++|++.+.||+|+||.||+|++ .|+.||||++..... ..+.+|.+++... +||||+++++++...
T Consensus 32 ~~~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 107 (337)
T 3mdy_A 32 QRTIAKQIQMVKQIGKGRYGEVWMGKW-RGEKVAVKVFFTTEE---ASWFRETEIYQTVLMRHENILGFIAADIKGTGSW 107 (337)
T ss_dssp HTTHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGG
T ss_pred ccccccceEEEeEeecCCCeEEEEEEE-CCceEEEEEEecccc---chhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCC
Confidence 344567899999999999999999998 489999999864432 4455666666655 899999999999876
Q ss_pred CeeEEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhc-----CCCCeEeCCCCCCCeeeCCCCcEEEec
Q 002214 733 NFKALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFG-----HSNPIVHCDIKPSNVLLDDSMVAHLSD 807 (952)
Q Consensus 733 ~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~-----h~~~ivH~Dlk~~Nill~~~~~~kl~D 807 (952)
...++||||+++|+|.+++... .+++..++.++.|++.||+|||.. |..||+||||||+||+++.++.+||+|
T Consensus 108 ~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~D 185 (337)
T 3mdy_A 108 TQLYLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIAD 185 (337)
T ss_dssp CEEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECC
T ss_pred CceEEEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEe
Confidence 6889999999999999999764 589999999999999999999521 123999999999999999999999999
Q ss_pred cccccccCCcCccc---ccccccccccccccccCcCCcCcc------cchHhHHHHHHHHHhCCCCCCccccCccchhhh
Q 002214 808 FGIAKLLSEEDSMK---QTQTLATIGYIAPEYGREGQVSIK------GDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRW 878 (952)
Q Consensus 808 fgla~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~------~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~ 878 (952)
||+|+......... .....||+.|+|||++.+...+.+ +|||||||++|||+||..|+.........+...
T Consensus 186 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~ 265 (337)
T 3mdy_A 186 LGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDL 265 (337)
T ss_dssp CTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred CCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhh
Confidence 99998765433221 123579999999999887766555 999999999999999955443222111111111
Q ss_pred hccc--hhhhhhhcc-ccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHH
Q 002214 879 INDS--LPAVMNIMD-TNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLL 945 (952)
Q Consensus 879 ~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~ 945 (952)
.... .......+. .......+ .......+++++.+++.+||+.||++|||+.||+++|+++.+..
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 266 VPSDPSYEDMREIVCIKKLRPSFP--NRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp SCSSCCHHHHHHHHTTSCCCCCCC--GGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred cCCCCchhhhHHHHhhhccCcccc--ccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 1000 001111111 01111110 11123467889999999999999999999999999999998763
No 109
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.1e-39 Score=357.40 Aligned_cols=260 Identities=23% Similarity=0.394 Sum_probs=214.0
Q ss_pred HhccCCccceecCccceEEEEEEe------CCCcEEEEEEeeccC-chhhHHHHHHHHHHHhCCCCccceeeeEeecCCe
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRF------PDGIEVAIKVFHLQR-EGALNSFDAECEILKTIRHRNLVKIISSCTNHNF 734 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 734 (952)
..++|.+.+.||+|+||.||+|.+ .+++.||||+++... ....+.+.+|++++++++||||+++++++.+.+.
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 100 (314)
T 2ivs_A 21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100 (314)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence 356899999999999999999986 245899999987543 3445778999999999999999999999999999
Q ss_pred eEEEEEccCCCChhHHhhhcC-----------------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCC
Q 002214 735 KALVLEYMPKGSLEDCMYASN-----------------------FNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIK 791 (952)
Q Consensus 735 ~~lv~e~~~~g~L~~~l~~~~-----------------------~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk 791 (952)
.++||||+++|+|.+++.... ..+++.+++.++.|+++||+|| |++||+|||||
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~dik 177 (314)
T 2ivs_A 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLA 177 (314)
T ss_dssp CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHH---HHTTEECCCCS
T ss_pred eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHH---HHCCCcccccc
Confidence 999999999999999997643 2388999999999999999999 78999999999
Q ss_pred CCCeeeCCCCcEEEeccccccccCCcCcc-cccccccccccccccccCcCCcCcccchHhHHHHHHHHHh-CCCCCCccc
Q 002214 792 PSNVLLDDSMVAHLSDFGIAKLLSEEDSM-KQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFT-GMKPTNEFF 869 (952)
Q Consensus 792 ~~Nill~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~ 869 (952)
|+||++++++.+||+|||+++........ ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||....
T Consensus 178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 257 (314)
T 2ivs_A 178 ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP 257 (314)
T ss_dssp GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 99999999999999999999876543322 2233457889999999988889999999999999999999 999986532
Q ss_pred cCccchhhhhccchhhhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 002214 870 TGEMSIKRWINDSLPAVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDL 944 (952)
Q Consensus 870 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~ 944 (952)
... ... .+...... ..+..+++++.+++.+||+.||++||++.|++++|+++.++
T Consensus 258 ~~~--~~~-----------~~~~~~~~-------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 258 PER--LFN-----------LLKTGHRM-------ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp GGG--HHH-----------HHHTTCCC-------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHH--HHH-----------HhhcCCcC-------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 111 111 11110000 01234677899999999999999999999999999998764
No 110
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.3e-39 Score=348.54 Aligned_cols=263 Identities=23% Similarity=0.394 Sum_probs=215.0
Q ss_pred hccCCccc-eecCccceEEEEEEeC---CCcEEEEEEeeccC-chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEE
Q 002214 663 TDQFSEEN-LIGIGSYGSVYKGRFP---DGIEVAIKVFHLQR-EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKAL 737 (952)
Q Consensus 663 ~~~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 737 (952)
.++|.+.+ .||+|+||.||+|.+. +++.||||+++... ....+.+.+|++++++++||||+++++++ ..+..++
T Consensus 8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~l 86 (287)
T 1u59_A 8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALML 86 (287)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEE
T ss_pred HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEE
Confidence 34666666 9999999999999863 67889999997643 33457789999999999999999999999 4556899
Q ss_pred EEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCc
Q 002214 738 VLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEE 817 (952)
Q Consensus 738 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 817 (952)
||||+++++|.+++......+++..+..++.|+++||+|| |++||+||||||+||+++.++.+||+|||+++.....
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~ 163 (287)
T 1u59_A 87 VMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYL---EEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGAD 163 (287)
T ss_dssp EEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTC
T ss_pred EEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHH---HHCCEeeCCCchheEEEcCCCCEEECcccceeeeccC
Confidence 9999999999999987766799999999999999999999 7889999999999999999999999999999877543
Q ss_pred Cccc--ccccccccccccccccCcCCcCcccchHhHHHHHHHHHh-CCCCCCccccCccchhhhhccchhhhhhhccccc
Q 002214 818 DSMK--QTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFT-GMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNL 894 (952)
Q Consensus 818 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 894 (952)
.... .....+|+.|+|||++.+..++.++||||||+++|||++ |+.||...... ..... +....
T Consensus 164 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~-----------i~~~~ 230 (287)
T 1u59_A 164 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMAF-----------IEQGK 230 (287)
T ss_dssp SCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH--HHHHH-----------HHTTC
T ss_pred cceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH--HHHHH-----------HhcCC
Confidence 3221 222456889999999988889999999999999999999 99998653211 11111 10000
Q ss_pred cchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHHhhhc
Q 002214 895 LSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLLFANI 949 (952)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~~~~~ 949 (952)
. ...+..+++++.+++.+||+.||++||++.|++++|+++..+....-
T Consensus 231 ~-------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~ 278 (287)
T 1u59_A 231 R-------MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKV 278 (287)
T ss_dssp C-------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTTC
T ss_pred c-------CCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCcc
Confidence 0 01124567889999999999999999999999999999988876543
No 111
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=9.2e-40 Score=349.81 Aligned_cols=252 Identities=21% Similarity=0.390 Sum_probs=207.0
Q ss_pred hccCCccceecCccceEEEEEEeCCCcEEEEEEeeccC--chhhHHHHHHHHHHHhCCCCccceeeeEeecC--CeeEEE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQR--EGALNSFDAECEILKTIRHRNLVKIISSCTNH--NFKALV 738 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv 738 (952)
.++|.+.+.||+|+||.||+|++ +++.||||+++... ....+.+.+|+.++++++||||+++++++.+. +..++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEE-CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 45799999999999999999998 58999999987553 33456799999999999999999999999877 788999
Q ss_pred EEccCCCChhHHhhhcCC-CCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeCCCCCCCeeeCCCCcEEEeccccccccC
Q 002214 739 LEYMPKGSLEDCMYASNF-NLDIFQRLGIMIDVASALEYLHFGHSNP--IVHCDIKPSNVLLDDSMVAHLSDFGIAKLLS 815 (952)
Q Consensus 739 ~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~Lh~~h~~~--ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~ 815 (952)
|||+++|+|.+++..... .+++..++.++.|+++||+|| |+++ |+||||||+||+++.++.++++|||++....
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~ 164 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFL---HTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ 164 (271)
T ss_dssp EECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHH---TTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS
T ss_pred ecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHH---hcCCCceecCCCccceEEEcCCcceeEEeccceeeec
Confidence 999999999999987553 589999999999999999999 7888 9999999999999999999999999886432
Q ss_pred CcCcccccccccccccccccccCcCCcCc---ccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccc
Q 002214 816 EEDSMKQTQTLATIGYIAPEYGREGQVSI---KGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDT 892 (952)
Q Consensus 816 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~---~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 892 (952)
. ....+|+.|+|||.+.+..++. ++||||||+++|||++|+.||......+... .....
T Consensus 165 ~------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~------------~~~~~ 226 (271)
T 3kmu_A 165 S------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGM------------KVALE 226 (271)
T ss_dssp C------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHH------------HHHHS
T ss_pred c------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHH------------HHHhc
Confidence 2 2345899999999987765544 7999999999999999999986532111100 00000
Q ss_pred cccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHH
Q 002214 893 NLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRD 943 (952)
Q Consensus 893 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~ 943 (952)
... ...+..+++++.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 227 ~~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 227 GLR-------PTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp CCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred CCC-------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 000 01123467789999999999999999999999999998864
No 112
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1e-39 Score=358.97 Aligned_cols=261 Identities=24% Similarity=0.452 Sum_probs=197.0
Q ss_pred HhccCCccceecCccceEEEEEEeCC-C---cEEEEEEeecc--CchhhHHHHHHHHHHHhCCCCccceeeeEeecCCee
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRFPD-G---IEVAIKVFHLQ--REGALNSFDAECEILKTIRHRNLVKIISSCTNHNFK 735 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-~---~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 735 (952)
..++|++.+.||+|+||.||+|++.. + ..||||+++.. .....+.+.+|++++++++||||+++++++......
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 45689999999999999999998753 2 37999998654 344567899999999999999999999999876654
Q ss_pred ------EEEEEccCCCChhHHhhhcC-----CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEE
Q 002214 736 ------ALVLEYMPKGSLEDCMYASN-----FNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAH 804 (952)
Q Consensus 736 ------~lv~e~~~~g~L~~~l~~~~-----~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~k 804 (952)
++||||+++|+|.+++.... ..+++.+++.++.|+++||+|| |++||+||||||+||++++++.+|
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~L---H~~~ivH~Dikp~NIli~~~~~~k 177 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVC 177 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECTTSCEE
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHH---HcCCcccCCCCcceEEEcCCCCEE
Confidence 99999999999999886432 2589999999999999999999 789999999999999999999999
Q ss_pred EeccccccccCCcCccc-ccccccccccccccccCcCCcCcccchHhHHHHHHHHHh-CCCCCCccccCccchhhhhccc
Q 002214 805 LSDFGIAKLLSEEDSMK-QTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFT-GMKPTNEFFTGEMSIKRWINDS 882 (952)
Q Consensus 805 l~Dfgla~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~ 882 (952)
|+|||+|+......... .....+++.|+|||.+.+..++.++|||||||++|||++ |..||......+ .....
T Consensus 178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~-~~~~~---- 252 (323)
T 3qup_A 178 VADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE-IYNYL---- 252 (323)
T ss_dssp ECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG-HHHHH----
T ss_pred EeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH-HHHHH----
Confidence 99999998765433222 223457889999999998899999999999999999999 899986532211 11110
Q ss_pred hhhhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHH
Q 002214 883 LPAVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLL 945 (952)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~ 945 (952)
...... ..+..+++++.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 253 -------~~~~~~--------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 253 -------IGGNRL--------KQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp -------HTTCCC--------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred -------hcCCCC--------CCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 000000 012345778999999999999999999999999999987654
No 113
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=6.5e-40 Score=351.00 Aligned_cols=251 Identities=24% Similarity=0.453 Sum_probs=195.3
Q ss_pred hccCCccceecCccceEEEEEEeCCCcEEEEEEeeccCc----hhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQRE----GALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALV 738 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 738 (952)
.++|++.+.||+|+||.||+|++ .|+.||||+++.... ...+.+.+|++++++++||||+++++++.+++..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 45789999999999999999998 589999999865432 2346789999999999999999999999999999999
Q ss_pred EEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC---eEeCCCCCCCeeeCC--------CCcEEEec
Q 002214 739 LEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNP---IVHCDIKPSNVLLDD--------SMVAHLSD 807 (952)
Q Consensus 739 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~---ivH~Dlk~~Nill~~--------~~~~kl~D 807 (952)
|||+++++|.+++.. ..+++..++.++.|+++|++|| |++| |+||||||+||+++. ++.+||+|
T Consensus 85 ~e~~~~~~L~~~~~~--~~~~~~~~~~i~~~l~~~l~~l---H~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~D 159 (271)
T 3dtc_A 85 MEFARGGPLNRVLSG--KRIPPDILVNWAVQIARGMNYL---HDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITD 159 (271)
T ss_dssp EECCTTEEHHHHHTS--SCCCHHHHHHHHHHHHHHHHHH---HHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECC
T ss_pred EEcCCCCCHHHHhhc--CCCCHHHHHHHHHHHHHHHHHH---HhCCCCceeecCCchHHEEEecccccccccCcceEEcc
Confidence 999999999998864 3689999999999999999999 5666 999999999999986 77899999
Q ss_pred cccccccCCcCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhh
Q 002214 808 FGIAKLLSEEDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVM 887 (952)
Q Consensus 808 fgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 887 (952)
||+++...... .....||+.|+|||.+.+..++.++||||||+++|||++|+.||..........
T Consensus 160 fg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~------------ 224 (271)
T 3dtc_A 160 FGLAREWHRTT---KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAY------------ 224 (271)
T ss_dssp CCC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHH------------
T ss_pred CCccccccccc---ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH------------
Confidence 99998654332 223568999999999988889999999999999999999999986532111000
Q ss_pred hhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 002214 888 NIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKI 941 (952)
Q Consensus 888 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i 941 (952)
......... ..+..+++++.+++.+||+.||++|||+.|++++|+++
T Consensus 225 ~~~~~~~~~-------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 225 GVAMNKLAL-------PIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp HHHTSCCCC-------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred hhhcCCCCC-------CCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 000000000 01234677899999999999999999999999999864
No 114
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.7e-39 Score=351.08 Aligned_cols=261 Identities=25% Similarity=0.436 Sum_probs=218.1
Q ss_pred HhccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEEE
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVLE 740 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 740 (952)
..++|++.+.||+|+||.||+|.+. +++.||+|++.... ...+.+.+|+.++++++||||+++++++.+++..++|||
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 89 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 89 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence 4678999999999999999999985 48899999986543 345778999999999999999999999999999999999
Q ss_pred ccCCCChhHHhhhcC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcCc
Q 002214 741 YMPKGSLEDCMYASN-FNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEEDS 819 (952)
Q Consensus 741 ~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 819 (952)
|+++++|.+++.... ..+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||++........
T Consensus 90 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~l---H~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 166 (288)
T 3kfa_A 90 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 166 (288)
T ss_dssp CCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHH---HHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSS
T ss_pred cCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHH---HHCCccCCCCCcceEEEcCCCCEEEccCccceeccCCcc
Confidence 999999999997643 4689999999999999999999 788999999999999999999999999999997765544
Q ss_pred ccccccccccccccccccCcCCcCcccchHhHHHHHHHHHh-CCCCCCccccCccchhhhhccchhhhhhhccccccchh
Q 002214 820 MKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFT-GMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSED 898 (952)
Q Consensus 820 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 898 (952)
.......+++.|+|||.+.+..++.++||||||+++|+|++ |..||...... .... .+......
T Consensus 167 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~--~~~~-----------~~~~~~~~-- 231 (288)
T 3kfa_A 167 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYE-----------LLEKDYRM-- 231 (288)
T ss_dssp EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHH-----------HHHTTCCC--
T ss_pred ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHH-----------HHhccCCC--
Confidence 44444567889999999988899999999999999999999 99998653211 1111 11111000
Q ss_pred hHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHHh
Q 002214 899 EEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLLF 946 (952)
Q Consensus 899 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~~ 946 (952)
..+..+++++.+++.+||+.||++|||+.|+++.|+++.+...
T Consensus 232 -----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~~ 274 (288)
T 3kfa_A 232 -----ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 274 (288)
T ss_dssp -----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred -----CCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhcc
Confidence 1123467789999999999999999999999999999877643
No 115
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.1e-39 Score=363.28 Aligned_cols=253 Identities=21% Similarity=0.353 Sum_probs=206.5
Q ss_pred HhccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccC--chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEE
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQR--EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALV 738 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 738 (952)
..++|.+.+.||+|+||.||+|.+. +|+.||+|++.... ....+.+.+|+.++++++||||+++++++.+++..|+|
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 4568999999999999999999874 68999999997543 23456788999999999999999999999999999999
Q ss_pred EEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCC---CcEEEeccccccccC
Q 002214 739 LEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDS---MVAHLSDFGIAKLLS 815 (952)
Q Consensus 739 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~---~~~kl~Dfgla~~~~ 815 (952)
|||+++|+|.+.+.... .+++..+..++.|+++||+|| |++||+||||||+||+++.+ +.+||+|||+++...
T Consensus 107 ~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~l---H~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~ 182 (362)
T 2bdw_A 107 FDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYC---HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 182 (362)
T ss_dssp ECCCCSCBHHHHHTTCS-CCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCT
T ss_pred EecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEec
Confidence 99999999999887544 689999999999999999999 78899999999999999865 459999999998765
Q ss_pred CcCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhcccccc
Q 002214 816 EEDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLL 895 (952)
Q Consensus 816 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 895 (952)
... ......||+.|+|||++.+..++.++|||||||++|||++|..||..... ..... .+......
T Consensus 183 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~--~~~~~----------~i~~~~~~ 248 (362)
T 2bdw_A 183 DSE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--HRLYA----------QIKAGAYD 248 (362)
T ss_dssp TCC--SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHH----------HHHHTCCC
T ss_pred CCc--ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--HHHHH----------HHHhCCCC
Confidence 332 22345799999999999988999999999999999999999999865211 00000 00000000
Q ss_pred chhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 896 SEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 896 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
... .....+++++.+++.+||+.||++||++.|++++
T Consensus 249 ~~~-----~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 249 YPS-----PEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp CCT-----TGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred CCc-----ccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000 0123457789999999999999999999999875
No 116
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=2.5e-39 Score=351.26 Aligned_cols=267 Identities=21% Similarity=0.287 Sum_probs=210.6
Q ss_pred HHhccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEe-ecCCeeEEE
Q 002214 661 RATDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSC-TNHNFKALV 738 (952)
Q Consensus 661 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lv 738 (952)
...++|++.+.||+|+||.||+|++ .+++.||||+...... ...+.+|+.++++++|++++..++++ ...+..++|
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (296)
T 4hgt_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV 83 (296)
T ss_dssp -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEE
Confidence 3457899999999999999999997 5789999998754433 24578999999999988877766655 667788999
Q ss_pred EEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeee---CCCCcEEEeccccccccC
Q 002214 739 LEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLL---DDSMVAHLSDFGIAKLLS 815 (952)
Q Consensus 739 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill---~~~~~~kl~Dfgla~~~~ 815 (952)
|||+ +++|.+++......+++..+..++.|++.||+|| |++||+||||||+||++ +.++.+||+|||+|+...
T Consensus 84 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L---H~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~ 159 (296)
T 4hgt_A 84 MELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYI---HSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp EECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred EEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHeeeeccCCCCeEEEecCccceecc
Confidence 9999 9999999987666899999999999999999999 78999999999999999 789999999999998765
Q ss_pred CcCcc------cccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccc--hhhhhccchhhhh
Q 002214 816 EEDSM------KQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMS--IKRWINDSLPAVM 887 (952)
Q Consensus 816 ~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~--~~~~~~~~~~~~~ 887 (952)
..... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||......... .........+
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~--- 236 (296)
T 4hgt_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMS--- 236 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHH---
T ss_pred CcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhccccc---
Confidence 43321 122457999999999999999999999999999999999999999764322111 1110000000
Q ss_pred hhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHHhhh
Q 002214 888 NIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLLFAN 948 (952)
Q Consensus 888 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~~~~ 948 (952)
.........+++++.+++.+||+.||++|||+.|+++.|+++.++....
T Consensus 237 ------------~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~~ 285 (296)
T 4hgt_A 237 ------------TPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFS 285 (296)
T ss_dssp ------------SCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTCC
T ss_pred ------------chhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCCC
Confidence 0011112345788999999999999999999999999999998876543
No 117
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=5.7e-40 Score=361.60 Aligned_cols=273 Identities=24% Similarity=0.355 Sum_probs=214.8
Q ss_pred hccCCccceecCccceEEEEEEe-----CCCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEee--cCCee
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRF-----PDGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSCT--NHNFK 735 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~ 735 (952)
.++|++.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++. +....
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 35799999999999999999984 468999999998776666678999999999999999999999886 45678
Q ss_pred EEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccC
Q 002214 736 ALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLS 815 (952)
Q Consensus 736 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~ 815 (952)
++||||+++++|.+++......+++..++.++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++...
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~l---H~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 178 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLP 178 (327)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEEETTEEEECCGGGCEECC
T ss_pred EEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HhCCccCCCCChhhEEECCCCCEEEcccccceecc
Confidence 999999999999999987665799999999999999999999 78999999999999999999999999999998765
Q ss_pred CcCcc--cccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhc--cchhhhhhhcc
Q 002214 816 EEDSM--KQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWIN--DSLPAVMNIMD 891 (952)
Q Consensus 816 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 891 (952)
..... ......+|+.|+|||++.+..++.++||||||+++|+|++|+.||............+.. .........+.
T Consensus 179 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (327)
T 3lxl_A 179 LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLE 258 (327)
T ss_dssp TTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHH
T ss_pred cCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhh
Confidence 43321 223356888899999998888999999999999999999999997542211000000000 00001111111
Q ss_pred ccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHH
Q 002214 892 TNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLL 945 (952)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~ 945 (952)
.... ...+..+++++.+++.+||+.||++|||+.|++++|+++....
T Consensus 259 ~~~~-------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 305 (327)
T 3lxl_A 259 EGQR-------LPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGS 305 (327)
T ss_dssp TTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred cccC-------CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 1110 0123456788999999999999999999999999999886654
No 118
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=4.5e-40 Score=377.84 Aligned_cols=257 Identities=26% Similarity=0.460 Sum_probs=206.6
Q ss_pred HhccCCccceecCccceEEEEEEeCCCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEEEc
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVLEY 741 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 741 (952)
..++|++.+.||+|+||.||+|.+.++..||||+++.... ..+.+.+|++++++++||||+++++++.+ +..++||||
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~ 259 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 259 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehh
Confidence 4567899999999999999999998888999999975443 34679999999999999999999999876 678999999
Q ss_pred cCCCChhHHhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcCcc
Q 002214 742 MPKGSLEDCMYAS-NFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEEDSM 820 (952)
Q Consensus 742 ~~~g~L~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 820 (952)
+++|+|.+++... ...+++.++..++.|+++||+|| |+++|+||||||+||++++++.+||+|||+++........
T Consensus 260 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~L---H~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 336 (452)
T 1fmk_A 260 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV---ERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 336 (452)
T ss_dssp CTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECGGGCEEECCCCTTC--------
T ss_pred hcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeCCCCChhhEEECCCCCEEECCCccceecCCCcee
Confidence 9999999999753 23589999999999999999999 7899999999999999999999999999999876543333
Q ss_pred cccccccccccccccccCcCCcCcccchHhHHHHHHHHHh-CCCCCCccccCccchhhhhccchhhhhhhccccccchhh
Q 002214 821 KQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFT-GMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSEDE 899 (952)
Q Consensus 821 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 899 (952)
......+++.|+|||.+.++.++.++|||||||++|||++ |+.||......+ ....+.....
T Consensus 337 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~-------------~~~~i~~~~~---- 399 (452)
T 1fmk_A 337 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-------------VLDQVERGYR---- 399 (452)
T ss_dssp ------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-------------HHHHHHTTCC----
T ss_pred cccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHH-------------HHHHHHcCCC----
Confidence 3334557889999999988899999999999999999999 999986532111 0000100100
Q ss_pred HHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHH
Q 002214 900 EHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRD 943 (952)
Q Consensus 900 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~ 943 (952)
...+..+++++.++|.+||+.||++|||+.++++.|+++..
T Consensus 400 ---~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~ 440 (452)
T 1fmk_A 400 ---MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 440 (452)
T ss_dssp ---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred ---CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhc
Confidence 01234578889999999999999999999999999987754
No 119
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=2.2e-39 Score=362.10 Aligned_cols=249 Identities=21% Similarity=0.349 Sum_probs=200.9
Q ss_pred CccceecCccceEEEEEEe-CCCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEEEccCCC
Q 002214 667 SEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVLEYMPKG 745 (952)
Q Consensus 667 ~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 745 (952)
...+.||+|+||.||+|.. .+|+.||+|+++.......+.+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~ 171 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGG 171 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence 3357899999999999987 469999999998766556678999999999999999999999999999999999999999
Q ss_pred ChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeee--CCCCcEEEeccccccccCCcCccccc
Q 002214 746 SLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLL--DDSMVAHLSDFGIAKLLSEEDSMKQT 823 (952)
Q Consensus 746 ~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill--~~~~~~kl~Dfgla~~~~~~~~~~~~ 823 (952)
+|.+++......+++..+..++.|+++||+|| |++||+||||||+||++ +.++.+||+|||+++....... ..
T Consensus 172 ~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~--~~ 246 (373)
T 2x4f_A 172 ELFDRIIDESYNLTELDTILFMKQICEGIRHM---HQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK--LK 246 (373)
T ss_dssp EEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB--CC
T ss_pred cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc--cc
Confidence 99998877666799999999999999999999 78999999999999999 6778999999999987654332 23
Q ss_pred ccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccchhhHHHH
Q 002214 824 QTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSEDEEHAN 903 (952)
Q Consensus 824 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 903 (952)
...||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..+..+ .........
T Consensus 247 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-~~~~~i-----------~~~~~~~~~----- 309 (373)
T 2x4f_A 247 VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA-ETLNNI-----------LACRWDLED----- 309 (373)
T ss_dssp CCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHH-----------HHTCCCSCS-----
T ss_pred cccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHH-----------HhccCCCCh-----
Confidence 356999999999999889999999999999999999999998652111 011111 111000000
Q ss_pred HhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 904 VAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 904 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
.....+++++.+++.+||+.||++|||+.|++++
T Consensus 310 ~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 310 EEFQDISEEAKEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred hhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0123457789999999999999999999999983
No 120
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=362.73 Aligned_cols=250 Identities=23% Similarity=0.341 Sum_probs=204.1
Q ss_pred hccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccC---chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQR---EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALV 738 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 738 (952)
.++|.+.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..|+|
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 467999999999999999999874 68999999986432 23456788999999999999999999999999999999
Q ss_pred EEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcC
Q 002214 739 LEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEED 818 (952)
Q Consensus 739 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 818 (952)
|||+++|+|.+++.... .+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+|+......
T Consensus 94 ~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~L---H~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 169 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQNV-HFKEETVKLFICELVMALDYL---QNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET 169 (384)
T ss_dssp ECCCTTEEHHHHHHTTC-CCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred EecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCceeccCcHHHeEECCCCCEEEeccceeeeccCCC
Confidence 99999999999987643 699999999999999999999 78999999999999999999999999999998764332
Q ss_pred cccccccccccccccccccCc---CCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhcccccc
Q 002214 819 SMKQTQTLATIGYIAPEYGRE---GQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLL 895 (952)
Q Consensus 819 ~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 895 (952)
......||+.|+|||++.. ..++.++|||||||++|||++|+.||....... ..... ..+....
T Consensus 170 --~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~--~~~~~--------~~~~~~~- 236 (384)
T 4fr4_A 170 --QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS--SKEIV--------HTFETTV- 236 (384)
T ss_dssp --CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC--HHHHH--------HHHHHCC-
T ss_pred --ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc--HHHHH--------HHHhhcc-
Confidence 2344679999999998863 458999999999999999999999986422111 11110 0000000
Q ss_pred chhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCC-HHHHHH
Q 002214 896 SEDEEHANVAKQSCASSVLSLAMECTSESPENRVN-TKEIIS 936 (952)
Q Consensus 896 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~ev~~ 936 (952)
...+..+++++.+++.+||+.||++||+ +.++.+
T Consensus 237 -------~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 237 -------VTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp -------CCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred -------cCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 0012345778999999999999999998 666654
No 121
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=2e-39 Score=358.26 Aligned_cols=257 Identities=23% Similarity=0.294 Sum_probs=204.9
Q ss_pred hccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccC---chhhHHHHHHHHHHHhC-CCCccceeeeEeecCCeeEE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQR---EGALNSFDAECEILKTI-RHRNLVKIISSCTNHNFKAL 737 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 737 (952)
.++|++.+.||+|+||.||+|+.+ +++.||+|+++... ....+.+.+|..+++++ +||||+++++++.+.+..|+
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 357999999999999999999984 68999999997542 23456688999999988 89999999999999999999
Q ss_pred EEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCc
Q 002214 738 VLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEE 817 (952)
Q Consensus 738 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 817 (952)
||||+++|+|.+++.... .+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+|+.....
T Consensus 88 v~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYL---HERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp EECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred EEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 999999999999987654 689999999999999999999 7899999999999999999999999999999864322
Q ss_pred CcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhh-hhccccccc
Q 002214 818 DSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVM-NIMDTNLLS 896 (952)
Q Consensus 818 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 896 (952)
. ......+||+.|+|||++.+..++.++||||+||++|||++|+.||......+..... ...... .+.....
T Consensus 164 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~----~~~~~~~~i~~~~~-- 236 (345)
T 3a8x_A 164 G-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQN----TEDYLFQVILEKQI-- 236 (345)
T ss_dssp T-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-----------CHHHHHHHHHHCCC--
T ss_pred C-CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccc----cHHHHHHHHHcCCC--
Confidence 2 2233467999999999999989999999999999999999999999653221110000 000000 0000000
Q ss_pred hhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCH------HHHHHH
Q 002214 897 EDEEHANVAKQSCASSVLSLAMECTSESPENRVNT------KEIISR 937 (952)
Q Consensus 897 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~ev~~~ 937 (952)
..+..++.++.+++.+||+.||++||++ .|+++|
T Consensus 237 -------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 237 -------RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp -------CCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred -------CCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 1123457789999999999999999996 566543
No 122
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-39 Score=354.78 Aligned_cols=246 Identities=24% Similarity=0.330 Sum_probs=205.8
Q ss_pred hccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccC---chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQR---EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALV 738 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 738 (952)
.++|++.+.||+|+||.||+|+.. +|+.||+|+++... ....+.+.+|..+++.++||||+++++++.+.+..|+|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 467999999999999999999884 69999999986542 23346788999999999999999999999999999999
Q ss_pred EEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcC
Q 002214 739 LEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEED 818 (952)
Q Consensus 739 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 818 (952)
|||+++|+|.+++.... .+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+|+.....
T Consensus 85 ~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~- 159 (318)
T 1fot_A 85 MDYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYL---HSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV- 159 (318)
T ss_dssp ECCCCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHH---HTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC-
T ss_pred EeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCccccCCChheEEEcCCCCEEEeecCcceecCCc-
Confidence 99999999999997654 689999999999999999999 7999999999999999999999999999999875432
Q ss_pred cccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccchh
Q 002214 819 SMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSED 898 (952)
Q Consensus 819 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 898 (952)
....+||+.|+|||++.+..++.++||||+||++|||++|+.||...... ..+ ..+......
T Consensus 160 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~-----------~~i~~~~~~--- 221 (318)
T 1fot_A 160 ---TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM-KTY-----------EKILNAELR--- 221 (318)
T ss_dssp ---BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-HHH-----------HHHHHCCCC---
T ss_pred ---cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH-HHH-----------HHHHhCCCC---
Confidence 23357999999999999999999999999999999999999998652110 001 111111110
Q ss_pred hHHHHHhhhhhHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 002214 899 EEHANVAKQSCASSVLSLAMECTSESPENRV-----NTKEIISR 937 (952)
Q Consensus 899 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~ev~~~ 937 (952)
.+..+++++.+++.+|+..||++|| ++.|++++
T Consensus 222 ------~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 222 ------FPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp ------CCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred ------CCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 1234567899999999999999999 88888764
No 123
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.5e-39 Score=352.24 Aligned_cols=269 Identities=20% Similarity=0.285 Sum_probs=204.4
Q ss_pred ccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccC--chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEEE
Q 002214 664 DQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQR--EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVLE 740 (952)
Q Consensus 664 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 740 (952)
++|++.+.||+|+||+||+|++. +|+.||||++.... ....+.+.+|+.++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 57999999999999999999984 68999999987543 2334678899999999999999999999999999999999
Q ss_pred ccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcCcc
Q 002214 741 YMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEEDSM 820 (952)
Q Consensus 741 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 820 (952)
|+++ ++.+.+......+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+|+...... .
T Consensus 82 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~l---H~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~ 156 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFC---HSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV-R 156 (292)
T ss_dssp CCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCC-S
T ss_pred cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCcc-c
Confidence 9975 66666666566899999999999999999999 78899999999999999999999999999998764332 2
Q ss_pred cccccccccccccccccCcCC-cCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhcc---chh----hhhhhccc
Q 002214 821 KQTQTLATIGYIAPEYGREGQ-VSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWIND---SLP----AVMNIMDT 892 (952)
Q Consensus 821 ~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~---~~~----~~~~~~~~ 892 (952)
......+|+.|+|||++.+.. ++.++||||+||++|||++|..||................ ..+ ......+.
T Consensus 157 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 236 (292)
T 3o0g_A 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDY 236 (292)
T ss_dssp CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTC
T ss_pred cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccc
Confidence 233456899999999887665 7999999999999999999988864322111111111110 000 00000000
Q ss_pred cccc--hhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 893 NLLS--EDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 893 ~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
.... ............+++++.+++.+||+.||++|||++|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 237 KPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp CCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0000 00000001123457789999999999999999999999864
No 124
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=361.26 Aligned_cols=252 Identities=23% Similarity=0.308 Sum_probs=191.4
Q ss_pred HhccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEEE
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVLE 740 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 740 (952)
..++|.+.+.||+|+||.||+|++. +++.||||+++... ..+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 3567999999999999999999985 58899999987543 23668899999999999999999999999999999999
Q ss_pred ccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCC---CCcEEEeccccccccCCc
Q 002214 741 YMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDD---SMVAHLSDFGIAKLLSEE 817 (952)
Q Consensus 741 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~---~~~~kl~Dfgla~~~~~~ 817 (952)
|+++|+|.+++.... .+++.++..++.|++.||+|| |++||+||||||+||+++. ++.+||+|||+++.....
T Consensus 129 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 204 (349)
T 2w4o_A 129 LVTGGELFDRIVEKG-YYSERDAADAVKQILEAVAYL---HENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ 204 (349)
T ss_dssp CCCSCBHHHHHTTCS-SCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEESSSSTTCCEEECCCC--------
T ss_pred eCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcc
Confidence 999999999887644 689999999999999999999 7889999999999999975 899999999999866432
Q ss_pred CcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccch
Q 002214 818 DSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSE 897 (952)
Q Consensus 818 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 897 (952)
. ......||+.|+|||++.+..++.++|||||||++|||++|+.||.........+...... .....
T Consensus 205 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~-----------~~~~~ 271 (349)
T 2w4o_A 205 V--LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNC-----------EYYFI 271 (349)
T ss_dssp ----------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTT-----------CCCCC
T ss_pred c--ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhC-----------CCccC
Confidence 2 2233568999999999999899999999999999999999999986532211111111110 00000
Q ss_pred hhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 898 DEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 898 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
. .....++.++.+++.+||+.||++|||+.|++++
T Consensus 272 ~-----~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 272 S-----PWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp T-----TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred C-----chhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 0113456789999999999999999999999874
No 125
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.9e-39 Score=355.71 Aligned_cols=271 Identities=25% Similarity=0.453 Sum_probs=217.4
Q ss_pred hccCCccceecCccceEEEEEEe-----CCCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEeecCC--ee
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRF-----PDGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSCTNHN--FK 735 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~ 735 (952)
.++|++.+.||+|+||.||+|++ .+|+.||||++........+.+.+|++++++++||||+++++++...+ ..
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 45789999999999999999984 468999999997766666778999999999999999999999986653 78
Q ss_pred EEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccC
Q 002214 736 ALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLS 815 (952)
Q Consensus 736 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~ 815 (952)
++||||+++++|.+++......+++..++.++.|+++||+|| |++||+||||||+||+++.++.+||+|||+++...
T Consensus 120 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~ 196 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP 196 (326)
T ss_dssp EEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HhCCEeccCCCcceEEEcCCCcEEEecCcchhhcc
Confidence 999999999999999988777799999999999999999999 78999999999999999999999999999998775
Q ss_pred CcCccc--ccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccc------hhhhh
Q 002214 816 EEDSMK--QTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDS------LPAVM 887 (952)
Q Consensus 816 ~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~------~~~~~ 887 (952)
...... .....++..|+|||.+.+..++.++||||||+++|||+||..|+..... .+.+..... .....
T Consensus 197 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 273 (326)
T 2w1i_A 197 QDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA---EFMRMIGNDKQGQMIVFHLI 273 (326)
T ss_dssp SSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHH---HHHHHHCTTCCTHHHHHHHH
T ss_pred ccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHH---HHHHhhccccchhhhHHHHH
Confidence 443221 2234577889999999888899999999999999999999998754210 000100000 00011
Q ss_pred hhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHHh
Q 002214 888 NIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLLF 946 (952)
Q Consensus 888 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~~ 946 (952)
+.+..... ...+..+++++.+++.+||+.||++|||+.|+++.|+++++++.
T Consensus 274 ~~~~~~~~-------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l~ 325 (326)
T 2w1i_A 274 ELLKNNGR-------LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMA 325 (326)
T ss_dssp HHHHTTCC-------CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred HHhhcCCC-------CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence 11111100 01134567889999999999999999999999999999998864
No 126
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=6.2e-39 Score=348.17 Aligned_cols=264 Identities=21% Similarity=0.283 Sum_probs=213.7
Q ss_pred hccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEe-ecCCeeEEEEE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSC-TNHNFKALVLE 740 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lv~e 740 (952)
.++|++.+.||+|+||.||+|++ .+|+.||||++..... .+.+.+|+.++++++|++++..++++ .+.+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 56899999999999999999997 5799999999865443 35688999999999988877666655 56678899999
Q ss_pred ccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeee---CCCCcEEEeccccccccCCc
Q 002214 741 YMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLL---DDSMVAHLSDFGIAKLLSEE 817 (952)
Q Consensus 741 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill---~~~~~~kl~Dfgla~~~~~~ 817 (952)
|+ +++|.+++......+++..+..++.|++.||+|| |++||+||||||+||++ +.++.+||+|||+++.....
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (296)
T 3uzp_A 86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYI---HSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred ec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHH---HhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccc
Confidence 99 9999999987666899999999999999999999 78999999999999999 48899999999999876543
Q ss_pred Ccc------cccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCcc--chhhhhccchhhhhhh
Q 002214 818 DSM------KQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEM--SIKRWINDSLPAVMNI 889 (952)
Q Consensus 818 ~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~ 889 (952)
... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||........ .+.........
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~----- 236 (296)
T 3uzp_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMS----- 236 (296)
T ss_dssp TTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHH-----
T ss_pred ccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccC-----
Confidence 321 12345799999999999998999999999999999999999999976432211 11111100000
Q ss_pred ccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHHhh
Q 002214 890 MDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLLFA 947 (952)
Q Consensus 890 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~~~ 947 (952)
.........+++++.+++.+||+.||++|||+.|+++.|+++......
T Consensus 237 ----------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~ 284 (296)
T 3uzp_A 237 ----------TPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF 284 (296)
T ss_dssp ----------SCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred ----------CchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCC
Confidence 001112245678899999999999999999999999999999887654
No 127
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.4e-39 Score=351.71 Aligned_cols=250 Identities=26% Similarity=0.343 Sum_probs=197.3
Q ss_pred hccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccCc--------------------------hhhHHHHHHHHHHH
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQRE--------------------------GALNSFDAECEILK 715 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l~ 715 (952)
.++|++.+.||+|+||.||+|++ .+++.||||++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 46899999999999999999987 4689999999864421 12356889999999
Q ss_pred hCCCCccceeeeEeec--CCeeEEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCC
Q 002214 716 TIRHRNLVKIISSCTN--HNFKALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPS 793 (952)
Q Consensus 716 ~l~h~niv~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~ 793 (952)
+++||||+++++++.+ .+..++||||+++++|.+++.. ..+++.++..++.|+++||+|| |++||+||||||+
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dlkp~ 166 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL--KPLSEDQARFYFQDLIKGIEYL---HYQKIIHRDIKPS 166 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS--SCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGG
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCCHH
Confidence 9999999999999986 5688999999999999886543 3699999999999999999999 7889999999999
Q ss_pred CeeeCCCCcEEEeccccccccCCcCcccccccccccccccccccCcCC---cCcccchHhHHHHHHHHHhCCCCCCcccc
Q 002214 794 NVLLDDSMVAHLSDFGIAKLLSEEDSMKQTQTLATIGYIAPEYGREGQ---VSIKGDVYNYGIMLMEVFTGMKPTNEFFT 870 (952)
Q Consensus 794 Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---~~~~~Dv~slG~~l~el~tg~~p~~~~~~ 870 (952)
||+++.++.+||+|||+++....... ......||+.|+|||.+.+.. ++.++|||||||++|||++|+.||.....
T Consensus 167 Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~ 245 (298)
T 2zv2_A 167 NLLVGEDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI 245 (298)
T ss_dssp GEEECTTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred HEEECCCCCEEEecCCCccccccccc-cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH
Confidence 99999999999999999987654322 223457999999999987654 47889999999999999999999864211
Q ss_pred CccchhhhhccchhhhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 871 GEMSIKRWINDSLPAVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 871 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
..+.. . ......... ....+++++.+++.+||+.||++|||+.|++++
T Consensus 246 -----~~~~~----~---~~~~~~~~~-------~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 246 -----MCLHS----K---IKSQALEFP-------DQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp -----HHHHH----H---HHHCCCCCC-------SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred -----HHHHH----H---HhcccCCCC-------CccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 11000 0 000000000 012356789999999999999999999999764
No 128
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=4.9e-40 Score=362.36 Aligned_cols=251 Identities=23% Similarity=0.313 Sum_probs=204.7
Q ss_pred HHHhccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccC---chhhHHHHHHHHHHHhC-CCCccceeeeEeecCCe
Q 002214 660 LRATDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQR---EGALNSFDAECEILKTI-RHRNLVKIISSCTNHNF 734 (952)
Q Consensus 660 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 734 (952)
....++|.+.+.||+|+||.||+|+.+ +|+.||||+++... ....+.+..|..++..+ +||||+++++++.+.+.
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 345678999999999999999999984 68999999997542 23346678899999887 99999999999999999
Q ss_pred eEEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEecccccccc
Q 002214 735 KALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLL 814 (952)
Q Consensus 735 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~ 814 (952)
.|+||||+++|+|.+++.... .+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+|+..
T Consensus 93 ~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 168 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFL---HSKGIVYRDLKLDNILLDKDGHIKIADFGMCKEN 168 (345)
T ss_dssp EEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence 999999999999999987654 689999999999999999999 7889999999999999999999999999999864
Q ss_pred CCcCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccc
Q 002214 815 SEEDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNL 894 (952)
Q Consensus 815 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 894 (952)
.... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||...... ..+.. +.....
T Consensus 169 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-~~~~~-----------i~~~~~ 235 (345)
T 1xjd_A 169 MLGD-AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE-ELFHS-----------IRMDNP 235 (345)
T ss_dssp CCTT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHH-----------HHHCCC
T ss_pred ccCC-CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH-HHHHH-----------HHhCCC
Confidence 3222 2234467999999999999989999999999999999999999998652110 00000 000000
Q ss_pred cchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHH-HHHH
Q 002214 895 LSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTK-EIIS 936 (952)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-ev~~ 936 (952)
..+..+++++.+++.+||..||++||++. |+.+
T Consensus 236 ---------~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~ 269 (345)
T 1xjd_A 236 ---------FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ 269 (345)
T ss_dssp ---------CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred ---------CCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHc
Confidence 01234567899999999999999999997 6653
No 129
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=4e-39 Score=355.85 Aligned_cols=262 Identities=23% Similarity=0.441 Sum_probs=213.7
Q ss_pred HhccCCccceecCccceEEEEEEeC--------CCcEEEEEEeeccC-chhhHHHHHHHHHHHhC-CCCccceeeeEeec
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRFP--------DGIEVAIKVFHLQR-EGALNSFDAECEILKTI-RHRNLVKIISSCTN 731 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 731 (952)
..++|.+.+.||+|+||.||+|++. +++.||||+++... ....+.+.+|+.+++++ +||||+++++++..
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 3578999999999999999999862 46789999997543 33456789999999999 89999999999999
Q ss_pred CCeeEEEEEccCCCChhHHhhhcC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCee
Q 002214 732 HNFKALVLEYMPKGSLEDCMYASN---------------FNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVL 796 (952)
Q Consensus 732 ~~~~~lv~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nil 796 (952)
.+..++||||+++|+|.+++.... ..+++.+++.++.|+++||+|| |++||+||||||+||+
T Consensus 113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dlkp~NIl 189 (334)
T 2pvf_A 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVL 189 (334)
T ss_dssp SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEE
T ss_pred CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHH---HhCCeeCCCCccceEE
Confidence 999999999999999999997643 2489999999999999999999 7899999999999999
Q ss_pred eCCCCcEEEeccccccccCCcCcc-cccccccccccccccccCcCCcCcccchHhHHHHHHHHHh-CCCCCCccccCccc
Q 002214 797 LDDSMVAHLSDFGIAKLLSEEDSM-KQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFT-GMKPTNEFFTGEMS 874 (952)
Q Consensus 797 l~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~ 874 (952)
++.++.+||+|||+++........ ......+++.|+|||++.+..++.++||||||+++|||++ |+.||......
T Consensus 190 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--- 266 (334)
T 2pvf_A 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE--- 266 (334)
T ss_dssp ECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH---
T ss_pred EcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH---
Confidence 999999999999999876543322 2223457889999999988889999999999999999999 99998652111
Q ss_pred hhhhhccchhhhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHHh
Q 002214 875 IKRWINDSLPAVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLLF 946 (952)
Q Consensus 875 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~~ 946 (952)
.. ...+..... ...+..++.++.+++.+||+.||++||++.|++++|+++.....
T Consensus 267 --~~--------~~~~~~~~~-------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~ 321 (334)
T 2pvf_A 267 --EL--------FKLLKEGHR-------MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321 (334)
T ss_dssp --HH--------HHHHHHTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred --HH--------HHHHhcCCC-------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccc
Confidence 10 000000000 01123467789999999999999999999999999999987654
No 130
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.3e-39 Score=352.09 Aligned_cols=260 Identities=27% Similarity=0.466 Sum_probs=197.5
Q ss_pred HhccCCccceecCccceEEEEEEeCCCcEEEEEEeeccC--chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEE
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQR--EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVL 739 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 739 (952)
..++|++.+.||+|+||+||+|++. ..||||+++... ....+.+.+|+.++++++||||+++++++. ....++||
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~ 98 (289)
T 3og7_A 22 PDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVT 98 (289)
T ss_dssp CTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred CccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc-CCccEEEE
Confidence 4568999999999999999999864 359999986543 334577899999999999999999999654 45689999
Q ss_pred EccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcC-
Q 002214 740 EYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEED- 818 (952)
Q Consensus 740 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~- 818 (952)
||+++++|.+++......+++.+++.++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++......
T Consensus 99 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~l---H~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 175 (289)
T 3og7_A 99 QWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYL---HAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG 175 (289)
T ss_dssp ECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEEETTTEEEECCCC----------
T ss_pred EecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH---HhCCcccccCccceEEECCCCCEEEccceeccccccccc
Confidence 99999999999987777899999999999999999999 78999999999999999999999999999998654322
Q ss_pred cccccccccccccccccccC---cCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhcccccc
Q 002214 819 SMKQTQTLATIGYIAPEYGR---EGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLL 895 (952)
Q Consensus 819 ~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 895 (952)
........||+.|+|||.+. +..++.++||||||+++|||++|+.||......+. .... +.....
T Consensus 176 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~-----------~~~~~~ 243 (289)
T 3og7_A 176 SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ-IIEM-----------VGRGSL 243 (289)
T ss_dssp --------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHH-HHHH-----------HHHTSC
T ss_pred cccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHH-HHHH-----------hccccc
Confidence 12223356899999999886 56788899999999999999999999965322111 1110 000000
Q ss_pred chhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 002214 896 SEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIR 942 (952)
Q Consensus 896 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~ 942 (952)
... .......+++++.+++.+||+.||++|||+.|+++.|+++.
T Consensus 244 ~~~---~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 244 SPD---LSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp CCC---TTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred Ccc---hhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 000 00012356788999999999999999999999999999864
No 131
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=2.6e-39 Score=351.46 Aligned_cols=261 Identities=24% Similarity=0.432 Sum_probs=208.4
Q ss_pred hccCCccceecCccceEEEEEEeCC----CcEEEEEEeeccC-chhhHHHHHHHHHHHhCCCCccceeeeEee-cCCeeE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFPD----GIEVAIKVFHLQR-EGALNSFDAECEILKTIRHRNLVKIISSCT-NHNFKA 736 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~ 736 (952)
..+|++.+.||+|+||.||+|++.+ +..||+|.+.... ....+.+.+|+.++++++||||+++++++. .++..+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 3568889999999999999998632 3368999886543 344577899999999999999999999864 556889
Q ss_pred EEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCC
Q 002214 737 LVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSE 816 (952)
Q Consensus 737 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~ 816 (952)
+||||+++|+|.+++......+++..++.++.|+++||+|| |++||+||||||+||+++.++.+||+|||+|+....
T Consensus 104 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~l---H~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 180 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180 (298)
T ss_dssp EEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred EEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HhCCccCCCCchheEEECCCCCEEECcccccccccc
Confidence 99999999999999987777799999999999999999999 789999999999999999999999999999987654
Q ss_pred cCcc---cccccccccccccccccCcCCcCcccchHhHHHHHHHHHhC-CCCCCccccCccchhhhhccchhhhhhhccc
Q 002214 817 EDSM---KQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTG-MKPTNEFFTGEMSIKRWINDSLPAVMNIMDT 892 (952)
Q Consensus 817 ~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 892 (952)
.... ......+|+.|+|||.+.+..++.++||||+|+++|||++| ..||......+ .........
T Consensus 181 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~-~~~~~~~~~---------- 249 (298)
T 3f66_A 181 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD-ITVYLLQGR---------- 249 (298)
T ss_dssp GGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT-HHHHHHTTC----------
T ss_pred cchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH-HHHHHhcCC----------
Confidence 3321 12335578899999999888999999999999999999995 55554321111 111110000
Q ss_pred cccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHHh
Q 002214 893 NLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLLF 946 (952)
Q Consensus 893 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~~ 946 (952)
....+..+++++.+++.+||+.||++|||+.|+++.|+++.+.+.
T Consensus 250 ---------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~ 294 (298)
T 3f66_A 250 ---------RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 294 (298)
T ss_dssp ---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred ---------CCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 000123456789999999999999999999999999999987654
No 132
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1.9e-39 Score=358.48 Aligned_cols=251 Identities=23% Similarity=0.361 Sum_probs=199.3
Q ss_pred HhccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccC-chhhHHHHHHHHHHHhCCCCccceeeeEeecCC------
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQR-EGALNSFDAECEILKTIRHRNLVKIISSCTNHN------ 733 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 733 (952)
..++|++.+.||+|+||.||+|++. +|+.||||+++... +...+.+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 83 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE 83 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence 3568999999999999999999985 79999999997543 334578999999999999999999999885543
Q ss_pred ---------------------------------------------------eeEEEEEccCCCChhHHhhhcCC--CCCH
Q 002214 734 ---------------------------------------------------FKALVLEYMPKGSLEDCMYASNF--NLDI 760 (952)
Q Consensus 734 ---------------------------------------------------~~~lv~e~~~~g~L~~~l~~~~~--~l~~ 760 (952)
..++||||+++|+|.+++..... ..++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~ 163 (332)
T 3qd2_B 84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREH 163 (332)
T ss_dssp HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCH
T ss_pred hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhh
Confidence 37999999999999999976542 3567
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcCc-----------cccccccccc
Q 002214 761 FQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEEDS-----------MKQTQTLATI 829 (952)
Q Consensus 761 ~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~-----------~~~~~~~~~~ 829 (952)
..++.++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++....... .......||+
T Consensus 164 ~~~~~i~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 240 (332)
T 3qd2_B 164 GVCLHIFIQIAEAVEFL---HSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTK 240 (332)
T ss_dssp HHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CG
T ss_pred HHHHHHHHHHHHHHHHH---HhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCc
Confidence 77899999999999999 789999999999999999999999999999987754321 1223356999
Q ss_pred ccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccchhhHHHHHhhhhh
Q 002214 830 GYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSEDEEHANVAKQSC 909 (952)
Q Consensus 830 ~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (952)
.|+|||++.+..++.++|||||||++|||++|..|+.... . ........ . ........
T Consensus 241 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~-------~-------~~~~~~~~-~-------~~~~~~~~ 298 (332)
T 3qd2_B 241 LYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV-------R-------IITDVRNL-K-------FPLLFTQK 298 (332)
T ss_dssp GGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHH-------H-------HHHHHHTT-C-------CCHHHHHH
T ss_pred CccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHH-------H-------HHHHhhcc-C-------CCcccccC
Confidence 9999999998899999999999999999999877642210 0 00000000 0 00112334
Q ss_pred HHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 910 ASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 910 ~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
++++.+++.+||+.||++|||+.|++++
T Consensus 299 ~~~~~~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 299 YPQEHMMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp CHHHHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred ChhHHHHHHHHccCCCCcCCCHHHHhhc
Confidence 5678999999999999999999999864
No 133
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=5.1e-40 Score=355.43 Aligned_cols=253 Identities=21% Similarity=0.361 Sum_probs=205.9
Q ss_pred hccCCccceecCccceEEEEEEeCC-C-------cEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEeecCCe
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFPD-G-------IEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSCTNHNF 734 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 734 (952)
.++|.+.+.||+|+||+||+|++.. + +.||+|++........+.+.+|+.++++++||||+++++++.+++.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 4579999999999999999998742 3 5799999976666667889999999999999999999999999999
Q ss_pred eEEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCc--------EEEe
Q 002214 735 KALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMV--------AHLS 806 (952)
Q Consensus 735 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~--------~kl~ 806 (952)
.++||||+++|+|.+++......+++..+..++.|+++||+|| |++||+||||||+||+++.++. +||+
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~ 163 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFL---EENTLIHGNVCAKNILLIREEDRKTGNPPFIKLS 163 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEEC
T ss_pred CEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH---hhCCeECCCcCcceEEEecCCcccccccceeeec
Confidence 9999999999999999987766699999999999999999999 7899999999999999998887 9999
Q ss_pred ccccccccCCcCcccccccccccccccccccCc-CCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhh
Q 002214 807 DFGIAKLLSEEDSMKQTQTLATIGYIAPEYGRE-GQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPA 885 (952)
Q Consensus 807 Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 885 (952)
|||++...... ....+++.|+|||++.+ ..++.++||||||+++|||++|..|+.......... ..
T Consensus 164 Dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~-~~------- 230 (289)
T 4fvq_A 164 DPGISITVLPK-----DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKL-QF------- 230 (289)
T ss_dssp CCCSCTTTSCH-----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH-HH-------
T ss_pred cCcccccccCc-----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHH-HH-------
Confidence 99999755322 22457889999998877 678999999999999999999655543211111000 00
Q ss_pred hhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 002214 886 VMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDL 944 (952)
Q Consensus 886 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~ 944 (952)
.... ...+..+++++.+++.+||+.||++|||+.|++++|+++...
T Consensus 231 ----~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p 276 (289)
T 4fvq_A 231 ----YEDR---------HQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP 276 (289)
T ss_dssp ----HHTT---------CCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC--
T ss_pred ----hhcc---------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence 0000 001122355689999999999999999999999999987543
No 134
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=1.6e-39 Score=356.48 Aligned_cols=270 Identities=21% Similarity=0.368 Sum_probs=217.4
Q ss_pred cCHHHHHHHhccCCccceecCccceEEEEEEe------CCCcEEEEEEeeccCc-hhhHHHHHHHHHHHhC-CCCcccee
Q 002214 654 YSHDELLRATDQFSEENLIGIGSYGSVYKGRF------PDGIEVAIKVFHLQRE-GALNSFDAECEILKTI-RHRNLVKI 725 (952)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l 725 (952)
+....+....++|++.+.||+|+||+||+|++ .+++.||||+++.... ...+.+.+|+.+++++ +||||+++
T Consensus 17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 34455556678999999999999999999974 3578999999875433 3446789999999999 79999999
Q ss_pred eeEeecC-CeeEEEEEccCCCChhHHhhhcCCC---------------CCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCC
Q 002214 726 ISSCTNH-NFKALVLEYMPKGSLEDCMYASNFN---------------LDIFQRLGIMIDVASALEYLHFGHSNPIVHCD 789 (952)
Q Consensus 726 ~~~~~~~-~~~~lv~e~~~~g~L~~~l~~~~~~---------------l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~D 789 (952)
++++... ...++||||+++|+|.+++...... +++..++.++.|+++||+|| |++||+|||
T Consensus 97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~l---H~~~i~H~d 173 (316)
T 2xir_A 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRD 173 (316)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHH---HHTTCCCSC
T ss_pred EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHH---HhCCccccc
Confidence 9998765 4589999999999999999765432 88999999999999999999 788999999
Q ss_pred CCCCCeeeCCCCcEEEeccccccccCCcCc-ccccccccccccccccccCcCCcCcccchHhHHHHHHHHHh-CCCCCCc
Q 002214 790 IKPSNVLLDDSMVAHLSDFGIAKLLSEEDS-MKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFT-GMKPTNE 867 (952)
Q Consensus 790 lk~~Nill~~~~~~kl~Dfgla~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~ 867 (952)
|||+||+++.++.+||+|||+++....... .......+|+.|+|||++.+..++.++||||||+++|||+| |..||..
T Consensus 174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~ 253 (316)
T 2xir_A 174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253 (316)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcc
Confidence 999999999999999999999987654332 22233567899999999988899999999999999999998 9999865
Q ss_pred cccCccchhhhhccchhhhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHH
Q 002214 868 FFTGEMSIKRWINDSLPAVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLL 945 (952)
Q Consensus 868 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~ 945 (952)
....+....... .... ...+..+++++.+++.+||+.||++|||+.|++++|+++.+..
T Consensus 254 ~~~~~~~~~~~~------------~~~~-------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 312 (316)
T 2xir_A 254 VKIDEEFCRRLK------------EGTR-------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 312 (316)
T ss_dssp CCCSHHHHHHHH------------HTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred cchhHHHHHHhc------------cCcc-------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 322211111100 0000 0012335678999999999999999999999999999998764
No 135
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1e-39 Score=364.55 Aligned_cols=261 Identities=25% Similarity=0.451 Sum_probs=201.3
Q ss_pred ccCCccceecCccceEEEEEEeC--CC--cEEEEEEeecc-CchhhHHHHHHHHHHHhCCCCccceeeeEeec-CCeeEE
Q 002214 664 DQFSEENLIGIGSYGSVYKGRFP--DG--IEVAIKVFHLQ-REGALNSFDAECEILKTIRHRNLVKIISSCTN-HNFKAL 737 (952)
Q Consensus 664 ~~~~~~~~lg~G~~g~Vy~~~~~--~~--~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~l 737 (952)
..|.+.+.||+|+||+||+|++. ++ ..||||.++.. .....+.+.+|+.++++++||||+++++++.+ ++..++
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~l 168 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 168 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEE
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEE
Confidence 35777899999999999999863 32 46899988643 33456789999999999999999999998754 567899
Q ss_pred EEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCc
Q 002214 738 VLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEE 817 (952)
Q Consensus 738 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 817 (952)
||||+++|+|.+++......+++.++..++.|+++||+|| |++||+||||||+||+++.++.+||+|||+|+.....
T Consensus 169 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 169 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp EEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHH---HHCCEecCccchheEEECCCCCEEEeecccccccccc
Confidence 9999999999999987777789999999999999999999 7899999999999999999999999999999866433
Q ss_pred Ccc---cccccccccccccccccCcCCcCcccchHhHHHHHHHHHh-CCCCCCccccCccchhhhhccchhhhhhhcccc
Q 002214 818 DSM---KQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFT-GMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTN 893 (952)
Q Consensus 818 ~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 893 (952)
... ......+|+.|+|||.+.+..++.++|||||||++|||+| |..||......+ ....+. ...
T Consensus 246 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~--~~~~~~----------~~~ 313 (373)
T 3c1x_A 246 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD--ITVYLL----------QGR 313 (373)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC--HHHHHH----------TTC
T ss_pred ccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH--HHHHHH----------cCC
Confidence 221 1223457889999999998899999999999999999999 667775432211 111100 000
Q ss_pred ccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHHhh
Q 002214 894 LLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLLFA 947 (952)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~~~ 947 (952)
. ...+..++.++.+++.+||+.||++||++.|+++.|+++.+.+..
T Consensus 314 ~--------~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~ 359 (373)
T 3c1x_A 314 R--------LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 359 (373)
T ss_dssp C--------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCS
T ss_pred C--------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhccc
Confidence 0 011234677899999999999999999999999999999876543
No 136
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1.1e-39 Score=358.88 Aligned_cols=258 Identities=23% Similarity=0.397 Sum_probs=205.4
Q ss_pred hccCCccceecCccceEEEEEEeC-CCcE----EEEEEeeccC-chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP-DGIE----VAIKVFHLQR-EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKA 736 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 736 (952)
.++|++.+.||+|+||+||+|++. +++. ||+|.+.... ......+.+|+.++++++||||+++++++. ++..+
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 90 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQ 90 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEE
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccE
Confidence 357899999999999999999874 4443 7888774332 233456788999999999999999999986 45688
Q ss_pred EEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCC
Q 002214 737 LVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSE 816 (952)
Q Consensus 737 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~ 816 (952)
+||||+++|+|.+++......+++..+..++.|+++||+|| |++||+||||||+||+++.++.+||+|||+|+....
T Consensus 91 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 167 (325)
T 3kex_A 91 LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYL---EEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPP 167 (325)
T ss_dssp EEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHH---HHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCC
T ss_pred EEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHH---HhCCCCCCccchheEEECCCCeEEECCCCcccccCc
Confidence 99999999999999987666799999999999999999999 788999999999999999999999999999997754
Q ss_pred cCcc-cccccccccccccccccCcCCcCcccchHhHHHHHHHHHh-CCCCCCccccCccchhhhhccchhhhhhhccccc
Q 002214 817 EDSM-KQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFT-GMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNL 894 (952)
Q Consensus 817 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 894 (952)
.... ......+++.|+|||++.+..++.++|||||||++|||++ |+.||......+ .... +....
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~~~-----------~~~~~ 234 (325)
T 3kex_A 168 DDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE--VPDL-----------LEKGE 234 (325)
T ss_dssp CTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH--HHHH-----------HHTTC
T ss_pred ccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH--HHHH-----------HHcCC
Confidence 4322 2233567889999999998899999999999999999999 999987532211 1111 00000
Q ss_pred cchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 002214 895 LSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDL 944 (952)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~ 944 (952)
. ...+..++.++.+++.+||+.||++||++.|++++|+++.+.
T Consensus 235 ~-------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 235 R-------LAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp B-------CCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred C-------CCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 0 001223566789999999999999999999999999987543
No 137
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=5.4e-39 Score=351.06 Aligned_cols=268 Identities=24% Similarity=0.347 Sum_probs=204.1
Q ss_pred HhccCCccceecCccceEEEEEEe-CCCcEEEEEEeecc---CchhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEE
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQ---REGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKAL 737 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 737 (952)
..++|++.+.||+|+||.||+|.. .+|+.||||+++.. .......+.+|+.++++++||||+++++++...+..++
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 446799999999999999999987 57999999998653 23345678999999999999999999999999999999
Q ss_pred EEEccCCCChhHHhhh---cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEecccccccc
Q 002214 738 VLEYMPKGSLEDCMYA---SNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLL 814 (952)
Q Consensus 738 v~e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~ 814 (952)
||||+++++|.+++.. ....+++..++.++.|+++||+|| |++||+||||||+||+++.++.+||+|||+++..
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~L---H~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM---HSRRVMHRDIKPANVFITATGVVKLGDLGLGRFF 186 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHH---hhCCeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence 9999999999998864 344689999999999999999999 7899999999999999999999999999999866
Q ss_pred CCcCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccc
Q 002214 815 SEEDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNL 894 (952)
Q Consensus 815 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 894 (952)
..... ......+++.|+|||.+.+..++.++||||||+++|||++|+.||.............+ ....
T Consensus 187 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-----------~~~~ 254 (310)
T 2wqm_A 187 SSKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKI-----------EQCD 254 (310)
T ss_dssp -------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHH-----------HTTC
T ss_pred cCCCc-cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHh-----------hccc
Confidence 43322 22335689999999999988999999999999999999999999864321111111100 0000
Q ss_pred cchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHHhhhcc
Q 002214 895 LSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLLFANIE 950 (952)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~~~~~~ 950 (952)
... .....+++++.+++.+||+.||++|||+.||++.|++++...+...+
T Consensus 255 ~~~------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~~~~ 304 (310)
T 2wqm_A 255 YPP------LPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASSLE 304 (310)
T ss_dssp SCC------CCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC----
T ss_pred CCC------CcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhhhhh
Confidence 000 01134577899999999999999999999999999999988765443
No 138
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=2.2e-39 Score=358.40 Aligned_cols=246 Identities=22% Similarity=0.265 Sum_probs=206.1
Q ss_pred hccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccC---chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQR---EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALV 738 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 738 (952)
.++|++.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..|+|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 368999999999999999999984 69999999986542 23456788999999999999999999999999999999
Q ss_pred EEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcC
Q 002214 739 LEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEED 818 (952)
Q Consensus 739 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 818 (952)
|||+++|+|.+++.... .+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+|+.....
T Consensus 120 ~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~- 194 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYL---HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR- 194 (350)
T ss_dssp EECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC-
T ss_pred EcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCcccccCccceEEECCCCCEEEcccccceeccCC-
Confidence 99999999999997654 689999999999999999999 7899999999999999999999999999999876432
Q ss_pred cccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccchh
Q 002214 819 SMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSED 898 (952)
Q Consensus 819 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 898 (952)
....+||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..+. .+.....
T Consensus 195 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-~~~~-----------~i~~~~~---- 255 (350)
T 1rdq_E 195 ---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYE-----------KIVSGKV---- 255 (350)
T ss_dssp ---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHH-----------HHHHCCC----
T ss_pred ---cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHH-HHHH-----------HHHcCCC----
Confidence 23356999999999999889999999999999999999999998642110 0011 1111110
Q ss_pred hHHHHHhhhhhHHHHHHHHhhccccCCCCCCC-----HHHHHHH
Q 002214 899 EEHANVAKQSCASSVLSLAMECTSESPENRVN-----TKEIISR 937 (952)
Q Consensus 899 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~ev~~~ 937 (952)
..+..++.++.+++.+||+.||++||+ +.||.++
T Consensus 256 -----~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 256 -----RFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp -----CCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred -----CCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 012345778999999999999999998 8888764
No 139
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=5.9e-39 Score=351.45 Aligned_cols=270 Identities=24% Similarity=0.377 Sum_probs=191.9
Q ss_pred HhccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccCc-hhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEE
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQRE-GALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVL 739 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 739 (952)
..++|++.+.||+|+||+||+|... +|+.||+|+++.... ...+.+.+|++++++++||||+++++++..++..++||
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 82 (317)
T 2pmi_A 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVF 82 (317)
T ss_dssp ----------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEE
T ss_pred cccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEE
Confidence 3468999999999999999999874 689999999875432 33467889999999999999999999999999999999
Q ss_pred EccCCCChhHHhhhcC-----CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEecccccccc
Q 002214 740 EYMPKGSLEDCMYASN-----FNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLL 814 (952)
Q Consensus 740 e~~~~g~L~~~l~~~~-----~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~ 814 (952)
||++ |+|.+++.... ..+++..+..++.|+++||+|| |++||+||||||+||+++.++.+||+|||+++..
T Consensus 83 e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~l---H~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 158 (317)
T 2pmi_A 83 EFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFC---HENKILHRDLKPQNLLINKRGQLKLGDFGLARAF 158 (317)
T ss_dssp ECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTCCEEECCCSSCEET
T ss_pred EecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHH---HHCCeeeCCCChHHeEEcCCCCEEECcCccceec
Confidence 9997 59998886532 3589999999999999999999 7899999999999999999999999999999876
Q ss_pred CCcCcccccccccccccccccccCc-CCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhc---cch----hhh
Q 002214 815 SEEDSMKQTQTLATIGYIAPEYGRE-GQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWIN---DSL----PAV 886 (952)
Q Consensus 815 ~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~---~~~----~~~ 886 (952)
..... ......+|+.|+|||++.+ ..++.++|||||||++|||++|+.||......+ ....... ... +..
T Consensus 159 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~ 236 (317)
T 2pmi_A 159 GIPVN-TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE-QLKLIFDIMGTPNESLWPSV 236 (317)
T ss_dssp TSCCC-CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCTTTCGGG
T ss_pred CCCcc-cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCChhHhhhh
Confidence 43322 2234568999999998876 468999999999999999999999996532111 1111100 000 000
Q ss_pred hhh--cccccc----ch-hhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 887 MNI--MDTNLL----SE-DEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 887 ~~~--~~~~~~----~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
... ...... .. ........+..++.++.+++.+||+.||++|||++|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 237 TKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp GGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 000 000000 00 0000111123457789999999999999999999999864
No 140
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.1e-39 Score=352.61 Aligned_cols=246 Identities=24% Similarity=0.260 Sum_probs=197.5
Q ss_pred hccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccCc--hhhHHHHHHHHHHHhC-CCCccceeeeEeecCCeeEEE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQRE--GALNSFDAECEILKTI-RHRNLVKIISSCTNHNFKALV 738 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 738 (952)
.++|++.++||+|+||+||+|++. +|+.||||++..... .....+..|+..+.++ +||||+++++++.+.+..++|
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv 135 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ 135 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence 367999999999999999999985 799999998854332 2334455666666555 899999999999999999999
Q ss_pred EEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcC
Q 002214 739 LEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEED 818 (952)
Q Consensus 739 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 818 (952)
|||+ +++|.+++...+..+++..+..++.|++.||+|| |+++|+||||||+||+++.++.+||+|||+++......
T Consensus 136 ~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~ 211 (311)
T 3p1a_A 136 TELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHL---HSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG 211 (311)
T ss_dssp EECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC---
T ss_pred Eecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCEecCCCCHHHEEECCCCCEEEccceeeeecccCC
Confidence 9999 7799998888777899999999999999999999 68899999999999999999999999999998764332
Q ss_pred cccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccchh
Q 002214 819 SMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSED 898 (952)
Q Consensus 819 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 898 (952)
......||+.|+|||++.+ .++.++|||||||++|||++|..|+... .....+.. ...
T Consensus 212 --~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~----~~~~~~~~-----------~~~---- 269 (311)
T 3p1a_A 212 --AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG----EGWQQLRQ-----------GYL---- 269 (311)
T ss_dssp -----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH----HHHHHHTT-----------TCC----
T ss_pred --CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc----cHHHHHhc-----------cCC----
Confidence 2233569999999998875 7899999999999999999997765331 11111110 000
Q ss_pred hHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 899 EEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 899 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
....+..+++++.+++.+||+.||++|||+.|++++
T Consensus 270 ---~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 270 ---PPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp ---CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ---CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 011234567889999999999999999999999864
No 141
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.3e-38 Score=353.43 Aligned_cols=276 Identities=22% Similarity=0.330 Sum_probs=214.6
Q ss_pred CHHHHHHHhccCCccceecCccceEEEEEEeCCCcEEEEEEeeccCchhhHHHHHHHHHHHh--CCCCccceeeeEeecC
Q 002214 655 SHDELLRATDQFSEENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQREGALNSFDAECEILKT--IRHRNLVKIISSCTNH 732 (952)
Q Consensus 655 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~ 732 (952)
+........++|.+.+.||+|+||.||+|++ +|+.||||++.... ...+.+|++++.. ++||||+++++++...
T Consensus 33 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~ 108 (342)
T 1b6c_B 33 PLLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKD 108 (342)
T ss_dssp CHHHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHHHSCCCCTTBCCEEEEEECC
T ss_pred ceeecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCchh---HHHHHHHHHHHHHhhcCCCcEEEEEeeeccc
Confidence 3344455668899999999999999999998 68999999986432 3567889999988 7899999999999877
Q ss_pred C----eeEEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-----cCCCCeEeCCCCCCCeeeCCCCcE
Q 002214 733 N----FKALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHF-----GHSNPIVHCDIKPSNVLLDDSMVA 803 (952)
Q Consensus 733 ~----~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~-----~h~~~ivH~Dlk~~Nill~~~~~~ 803 (952)
. ..++||||+++|+|.+++... .+++.+++.++.|++.||+|||. .|+++|+||||||+||+++.++.+
T Consensus 109 ~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~ 186 (342)
T 1b6c_B 109 NGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC 186 (342)
T ss_dssp CSSCCCEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCE
T ss_pred CCccceeEEEEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCE
Confidence 5 789999999999999999764 58999999999999999999941 118899999999999999999999
Q ss_pred EEeccccccccCCcCcc---cccccccccccccccccCcC------CcCcccchHhHHHHHHHHHhC----------CCC
Q 002214 804 HLSDFGIAKLLSEEDSM---KQTQTLATIGYIAPEYGREG------QVSIKGDVYNYGIMLMEVFTG----------MKP 864 (952)
Q Consensus 804 kl~Dfgla~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slG~~l~el~tg----------~~p 864 (952)
||+|||+++........ ......||+.|+|||++.+. .++.++|||||||++|||++| ..|
T Consensus 187 kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p 266 (342)
T 1b6c_B 187 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 266 (342)
T ss_dssp EECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccC
Confidence 99999999876543322 22345699999999988765 344789999999999999999 667
Q ss_pred CCccccCccchhhhhccchhhhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 002214 865 TNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDL 944 (952)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~ 944 (952)
|............+.... .........+. ......+++.+.+++.+||+.||++|||+.||+++|+++.++
T Consensus 267 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~ 337 (342)
T 1b6c_B 267 YYDLVPSDPSVEEMRKVV-------CEQKLRPNIPN--RWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 337 (342)
T ss_dssp TTTTSCSSCCHHHHHHHH-------TTSCCCCCCCG--GGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred ccccCcCcccHHHHHHHH-------HHHHhCCCCcc--cccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHH
Confidence 655433322222221111 11111111110 011235678899999999999999999999999999999876
Q ss_pred H
Q 002214 945 L 945 (952)
Q Consensus 945 ~ 945 (952)
.
T Consensus 338 ~ 338 (342)
T 1b6c_B 338 E 338 (342)
T ss_dssp T
T ss_pred h
Confidence 3
No 142
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=7.5e-40 Score=357.79 Aligned_cols=258 Identities=22% Similarity=0.417 Sum_probs=198.3
Q ss_pred hccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccC---chhhHHHHHHHHHHHhCCCCccceeeeEeecCCe----
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQR---EGALNSFDAECEILKTIRHRNLVKIISSCTNHNF---- 734 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---- 734 (952)
.++|++.+.||+|+||.||+|++ .+++.||||+++... ......+.+|+.++++++||||+++++++.....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 46799999999999999999997 578999999997543 2334678899999999999999999999876543
Q ss_pred eEEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEecccccccc
Q 002214 735 KALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLL 814 (952)
Q Consensus 735 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~ 814 (952)
.|+||||+++++|.+++.... .+++.+++.++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++..
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~ 166 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFS---HQNGIIHRDVKPANIMISATNAVKVMDFGIARAI 166 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred cEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCCCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence 499999999999999997654 689999999999999999999 7889999999999999999999999999999876
Q ss_pred CCcCc--ccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccc
Q 002214 815 SEEDS--MKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDT 892 (952)
Q Consensus 815 ~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 892 (952)
..... .......||+.|+|||++.+..++.++||||||+++|||++|+.||......+.... ....
T Consensus 167 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~------------~~~~ 234 (311)
T 3ork_A 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ------------HVRE 234 (311)
T ss_dssp ---------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH------------HHHC
T ss_pred cccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHH------------HhcC
Confidence 54322 122335689999999999988999999999999999999999999865321111000 0000
Q ss_pred cccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHH-HHHHHH
Q 002214 893 NLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEII-SRLIKI 941 (952)
Q Consensus 893 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~-~~L~~i 941 (952)
.... .......+++++.+++.+||+.||++||++.+++ +.+.++
T Consensus 235 ~~~~-----~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 235 DPIP-----PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp CCCC-----HHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred CCCC-----cccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 0000 0111234678899999999999999999766655 444433
No 143
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.4e-39 Score=348.44 Aligned_cols=261 Identities=21% Similarity=0.386 Sum_probs=209.5
Q ss_pred cCCccceecCccceEEEEEEeC-C---CcEEEEEEeeccCc-hhhHHHHHHHHHHHhCCCCccceeeeEeecCCee-EEE
Q 002214 665 QFSEENLIGIGSYGSVYKGRFP-D---GIEVAIKVFHLQRE-GALNSFDAECEILKTIRHRNLVKIISSCTNHNFK-ALV 738 (952)
Q Consensus 665 ~~~~~~~lg~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-~lv 738 (952)
.|...+.||+|+||+||+|++. + +..||+|++..... ...+.+.+|+.++++++||||+++++++.+.+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 5667799999999999999862 2 33799999865433 3457789999999999999999999999766554 999
Q ss_pred EEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcC
Q 002214 739 LEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEED 818 (952)
Q Consensus 739 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 818 (952)
|||+.+|+|.+++......+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++......
T Consensus 102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L---H~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 178 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178 (298)
T ss_dssp ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence 999999999999987677899999999999999999999 78899999999999999999999999999998664432
Q ss_pred c---ccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhcccccc
Q 002214 819 S---MKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLL 895 (952)
Q Consensus 819 ~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 895 (952)
. .......+++.|+|||.+.+..++.++||||||+++|||++|..|+....... ...... .....
T Consensus 179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~-~~~~~~-----------~~~~~ 246 (298)
T 3pls_A 179 YYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPF-DLTHFL-----------AQGRR 246 (298)
T ss_dssp GGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGG-GHHHHH-----------HTTCC
T ss_pred ccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHH-HHHHHh-----------hcCCC
Confidence 2 12223567899999999999999999999999999999999666643321111 111110 00000
Q ss_pred chhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHHhh
Q 002214 896 SEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLLFA 947 (952)
Q Consensus 896 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~~~ 947 (952)
...+..+++++.+++.+||+.||++|||+.|+++.|+++.+.+..
T Consensus 247 -------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~ 291 (298)
T 3pls_A 247 -------LPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLG 291 (298)
T ss_dssp -------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCS
T ss_pred -------CCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhc
Confidence 001234567899999999999999999999999999999887654
No 144
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=7.2e-39 Score=361.67 Aligned_cols=272 Identities=18% Similarity=0.300 Sum_probs=206.6
Q ss_pred HhccCCccceecCc--cceEEEEEEeC-CCcEEEEEEeeccC--chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeE
Q 002214 662 ATDQFSEENLIGIG--SYGSVYKGRFP-DGIEVAIKVFHLQR--EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKA 736 (952)
Q Consensus 662 ~~~~~~~~~~lg~G--~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 736 (952)
..++|++.+.||+| +||+||+|++. +|+.||||++.... ....+.+.+|+.++++++||||+++++++.+++..+
T Consensus 23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 102 (389)
T 3gni_B 23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW 102 (389)
T ss_dssp CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence 35689999999999 99999999985 69999999997553 334567889999999999999999999999999999
Q ss_pred EEEEccCCCChhHHhhhcC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccC
Q 002214 737 LVLEYMPKGSLEDCMYASN-FNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLS 815 (952)
Q Consensus 737 lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~ 815 (952)
+||||+++|+|.+++.... ..+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||.+....
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~L---H~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~ 179 (389)
T 3gni_B 103 VVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYI---HHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMI 179 (389)
T ss_dssp EEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTCCEEECCGGGCEECE
T ss_pred EEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEcCCCCEEEcccccceeec
Confidence 9999999999999987652 4699999999999999999999 78999999999999999999999999999987543
Q ss_pred CcCc------ccccccccccccccccccCc--CCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhh
Q 002214 816 EEDS------MKQTQTLATIGYIAPEYGRE--GQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVM 887 (952)
Q Consensus 816 ~~~~------~~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 887 (952)
.... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ .........+...
T Consensus 180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~ 258 (389)
T 3gni_B 180 SHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM-LLEKLNGTVPCLL 258 (389)
T ss_dssp ETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTH-HHHC---------
T ss_pred cccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHhcCCCCccc
Confidence 2211 11122468999999999887 5789999999999999999999999976432221 1111111111000
Q ss_pred hh--------------------ccccccc------hhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 888 NI--------------------MDTNLLS------EDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 888 ~~--------------------~~~~~~~------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
.. ....... .........+..+++++.+++.+||+.||++|||+.|++++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 259 DTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp -----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred cccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 00 0000000 00000011234567889999999999999999999999876
No 145
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.1e-39 Score=355.19 Aligned_cols=259 Identities=25% Similarity=0.462 Sum_probs=205.7
Q ss_pred ccCCccceecCccceEEEEEEeCC-----CcEEEEEEeeccC-chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEE
Q 002214 664 DQFSEENLIGIGSYGSVYKGRFPD-----GIEVAIKVFHLQR-EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKAL 737 (952)
Q Consensus 664 ~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 737 (952)
.+|...+.||+|+||.||+|.+.. +..||||+++... ......+.+|+.++++++||||+++++++...+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 467788999999999999998632 3469999987543 3345678999999999999999999999999999999
Q ss_pred EEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCc
Q 002214 738 VLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEE 817 (952)
Q Consensus 738 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 817 (952)
||||+++|+|.+++......+++.+++.++.|+++||+|| |++||+||||||+||+++.++.+||+|||+++.....
T Consensus 124 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 200 (333)
T 1mqb_A 124 ITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 200 (333)
T ss_dssp EEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeCCCCChheEEECCCCcEEECCCCcchhhccc
Confidence 9999999999999987767899999999999999999999 7889999999999999999999999999999876543
Q ss_pred Ccc--cccccccccccccccccCcCCcCcccchHhHHHHHHHHHh-CCCCCCccccCccchhhhhccchhhhhhhccccc
Q 002214 818 DSM--KQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFT-GMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNL 894 (952)
Q Consensus 818 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 894 (952)
... ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...... +....+....
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~-------------~~~~~~~~~~ 267 (333)
T 1mqb_A 201 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH-------------EVMKAINDGF 267 (333)
T ss_dssp ----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-------------HHHHHHHTTC
T ss_pred cccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH-------------HHHHHHHCCC
Confidence 221 1222346789999999988899999999999999999999 99998652211 0001110000
Q ss_pred cchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHH
Q 002214 895 LSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLL 945 (952)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~ 945 (952)
. ...+..++.++.+++.+||+.||++||++.|++++|+++.+..
T Consensus 268 ~-------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 311 (333)
T 1mqb_A 268 R-------LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP 311 (333)
T ss_dssp C-------CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred c-------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 0 0012346778999999999999999999999999999987654
No 146
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=4.1e-39 Score=353.26 Aligned_cols=261 Identities=20% Similarity=0.270 Sum_probs=208.4
Q ss_pred HhccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEee----cCCeeE
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSCT----NHNFKA 736 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~----~~~~~~ 736 (952)
..++|++.+.||+|+||.||+|+. .+|+.||||++........+.+.+|+.++++++||||+++++++. .....+
T Consensus 27 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 106 (317)
T 2buj_A 27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW 106 (317)
T ss_dssp TTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred CCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence 346899999999999999999997 579999999987766666778999999999999999999999986 335789
Q ss_pred EEEEccCCCChhHHhhh---cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccc
Q 002214 737 LVLEYMPKGSLEDCMYA---SNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKL 813 (952)
Q Consensus 737 lv~e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~ 813 (952)
+||||+++|+|.+++.. ....+++.+++.++.|+++||+|| |++||+||||||+||+++.++.+||+|||++..
T Consensus 107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~L---H~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~ 183 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAI---HAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQ 183 (317)
T ss_dssp EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence 99999999999998876 345799999999999999999999 788999999999999999999999999999986
Q ss_pred cCCcCcc--------cccccccccccccccccCcCC---cCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccc
Q 002214 814 LSEEDSM--------KQTQTLATIGYIAPEYGREGQ---VSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDS 882 (952)
Q Consensus 814 ~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~---~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~ 882 (952)
....... ......||+.|+|||.+.+.. ++.++||||||+++|||++|+.||................
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~- 262 (317)
T 2buj_A 184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQN- 262 (317)
T ss_dssp SCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHC-
T ss_pred cccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhc-
Confidence 5422111 011235799999999887543 6889999999999999999999986532221111111100
Q ss_pred hhhhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHH
Q 002214 883 LPAVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRD 943 (952)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~ 943 (952)
... ...+..++.++.+++.+||+.||.+|||+.|++++|+++..
T Consensus 263 ----------~~~-------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~ 306 (317)
T 2buj_A 263 ----------QLS-------IPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP 306 (317)
T ss_dssp ----------C---------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred ----------cCC-------CCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence 000 00113456789999999999999999999999999988643
No 147
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=2.9e-39 Score=355.30 Aligned_cols=249 Identities=22% Similarity=0.308 Sum_probs=195.6
Q ss_pred hccCCccceecCccceEEEEEEe----CCCcEEEEEEeeccC----chhhHHHHHHHHHHHhCCCCccceeeeEeecCCe
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRF----PDGIEVAIKVFHLQR----EGALNSFDAECEILKTIRHRNLVKIISSCTNHNF 734 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 734 (952)
.++|++.+.||+|+||.||+|+. .+|+.||+|+++... ......+.+|+.++++++||||+++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46899999999999999999987 478999999986542 2234567899999999999999999999999999
Q ss_pred eEEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEecccccccc
Q 002214 735 KALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLL 814 (952)
Q Consensus 735 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~ 814 (952)
.|+||||+++|+|.+++.... .+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++..
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~l---H~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 171 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG-IFMEDTACFYLAEISMALGHL---HQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKES 171 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCTTTEEECTTSCEEECCCSCC---
T ss_pred EEEEEeCCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHH---HhCCEEcccCCHHHeEECCCCcEEEEeCCccccc
Confidence 999999999999999987654 689999999999999999999 7889999999999999999999999999999864
Q ss_pred CCcCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccc
Q 002214 815 SEEDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNL 894 (952)
Q Consensus 815 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 894 (952)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+ ... .+.....
T Consensus 172 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~-----------~i~~~~~ 238 (327)
T 3a62_A 172 IHDGT-VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKK-TID-----------KILKCKL 238 (327)
T ss_dssp --------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHH-----------HHHHTCC
T ss_pred ccCCc-cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHH-HHH-----------HHHhCCC
Confidence 33221 2234569999999999998889999999999999999999999986521110 000 0110000
Q ss_pred cchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 002214 895 LSEDEEHANVAKQSCASSVLSLAMECTSESPENRV-----NTKEIISR 937 (952)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~ev~~~ 937 (952)
..+..+++++.+++.+||..||++|| ++.|++++
T Consensus 239 ---------~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 239 ---------NLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp ---------CCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred ---------CCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 01234567899999999999999999 77788764
No 148
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=4.9e-39 Score=352.47 Aligned_cols=267 Identities=19% Similarity=0.269 Sum_probs=202.2
Q ss_pred hccCCcc-ceecCccceEEEEEEe-CCCcEEEEEEeeccCchhhHHHHHHHHHHHhC-CCCccceeeeEeecCCeeEEEE
Q 002214 663 TDQFSEE-NLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQREGALNSFDAECEILKTI-RHRNLVKIISSCTNHNFKALVL 739 (952)
Q Consensus 663 ~~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 739 (952)
.+.|.+. +.||+|+||+||+|+. .+++.||||++........+.+.+|++++.++ +||||+++++++.+++..++||
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 90 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF 90 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 3567774 7899999999999987 47899999999766555567899999999995 7999999999999999999999
Q ss_pred EccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCc---EEEeccccccccCC
Q 002214 740 EYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMV---AHLSDFGIAKLLSE 816 (952)
Q Consensus 740 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~---~kl~Dfgla~~~~~ 816 (952)
||+++|+|.+++.... .+++..+..++.|++.||+|| |++||+||||||+||+++.++. +||+|||++.....
T Consensus 91 e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 166 (316)
T 2ac3_A 91 EKMRGGSILSHIHKRR-HFNELEASVVVQDVASALDFL---HNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKL 166 (316)
T ss_dssp ECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC----
T ss_pred EcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHH---HhCCceeCCCCHHHEEEccCCCcCceEEEEccCcccccc
Confidence 9999999999997654 689999999999999999999 7889999999999999998776 99999999986542
Q ss_pred cCc------ccccccccccccccccccCc-----CCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhc--cch
Q 002214 817 EDS------MKQTQTLATIGYIAPEYGRE-----GQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWIN--DSL 883 (952)
Q Consensus 817 ~~~------~~~~~~~~~~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~--~~~ 883 (952)
... .......||+.|+|||++.. ..++.++|||||||++|||++|+.||......+..+..... ...
T Consensus 167 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 246 (316)
T 2ac3_A 167 NGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQ 246 (316)
T ss_dssp ---------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHH
T ss_pred CCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHH
Confidence 221 11123459999999998864 56889999999999999999999999764433221111000 000
Q ss_pred hhhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 884 PAVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 884 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
......+........ ......++.++.+++.+||+.||++|||+.|++++
T Consensus 247 ~~~~~~i~~~~~~~~----~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 247 NMLFESIQEGKYEFP----DKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHHHHHCCCCCC----HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHHhccCcccC----chhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 001111111100000 01123467789999999999999999999999874
No 149
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=2.2e-39 Score=358.41 Aligned_cols=250 Identities=20% Similarity=0.272 Sum_probs=204.9
Q ss_pred HhccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccC---chhhHHHHHHHHHHHhC-CCCccceeeeEeecCCeeE
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQR---EGALNSFDAECEILKTI-RHRNLVKIISSCTNHNFKA 736 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 736 (952)
..++|++.+.||+|+||.||+|+.. +|+.||||+++... ....+.+..|..++..+ +||+|+++++++.+.+..|
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 4578999999999999999999985 48899999987542 23456788999999988 8999999999999999999
Q ss_pred EEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCC
Q 002214 737 LVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSE 816 (952)
Q Consensus 737 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~ 816 (952)
+||||+++|+|.+++...+ .+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+|+....
T Consensus 98 lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~L---H~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 173 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFL---QSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 173 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCEEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence 9999999999999987654 699999999999999999999 789999999999999999999999999999986432
Q ss_pred cCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccc
Q 002214 817 EDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLS 896 (952)
Q Consensus 817 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 896 (952)
.. ......+||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..+. .+.....
T Consensus 174 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-~~~~-----------~i~~~~~-- 238 (353)
T 2i0e_A 174 DG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED-ELFQ-----------SIMEHNV-- 238 (353)
T ss_dssp TT-CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHH-----------HHHHCCC--
T ss_pred CC-cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH-HHHH-----------HHHhCCC--
Confidence 22 2233467999999999999999999999999999999999999998652110 0011 1111111
Q ss_pred hhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCC-----HHHHHHH
Q 002214 897 EDEEHANVAKQSCASSVLSLAMECTSESPENRVN-----TKEIISR 937 (952)
Q Consensus 897 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~ev~~~ 937 (952)
..+..++.++.+++.+||..||++||+ +.|+.++
T Consensus 239 -------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 239 -------AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp -------CCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred -------CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 012345778999999999999999995 5777654
No 150
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=6.5e-39 Score=350.94 Aligned_cols=263 Identities=22% Similarity=0.412 Sum_probs=202.3
Q ss_pred HHHhccCCccceecCccceEEEEEEeC----CCcEEEEEEeeccC--chhhHHHHHHHHHHHhCCCCccceeeeEeecCC
Q 002214 660 LRATDQFSEENLIGIGSYGSVYKGRFP----DGIEVAIKVFHLQR--EGALNSFDAECEILKTIRHRNLVKIISSCTNHN 733 (952)
Q Consensus 660 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 733 (952)
....++|.+.+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|+.++++++||||+++++++.+.+
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 109 (313)
T 3brb_A 30 VIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMS 109 (313)
T ss_dssp BCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC--
T ss_pred ccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecc
Confidence 345678999999999999999999763 35689999986543 334567899999999999999999999997754
Q ss_pred -----eeEEEEEccCCCChhHHhhh-----cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcE
Q 002214 734 -----FKALVLEYMPKGSLEDCMYA-----SNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVA 803 (952)
Q Consensus 734 -----~~~lv~e~~~~g~L~~~l~~-----~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~ 803 (952)
..++||||+++|+|.+++.. ....+++..++.++.|+++||+|| |++||+||||||+||+++.++.+
T Consensus 110 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~dikp~NIli~~~~~~ 186 (313)
T 3brb_A 110 SQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYL---SNRNFLHRDLAARNCMLRDDMTV 186 (313)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHH---HTTTCCCCCCSGGGEEECTTSCE
T ss_pred ccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCcceEEEcCCCcE
Confidence 35999999999999998853 234699999999999999999999 78999999999999999999999
Q ss_pred EEeccccccccCCcCccc-ccccccccccccccccCcCCcCcccchHhHHHHHHHHHh-CCCCCCccccCccchhhhhcc
Q 002214 804 HLSDFGIAKLLSEEDSMK-QTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFT-GMKPTNEFFTGEMSIKRWIND 881 (952)
Q Consensus 804 kl~Dfgla~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~ 881 (952)
||+|||+++......... .....+++.|+|||.+.+..++.++||||||+++|||++ |..||......+ .....
T Consensus 187 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-~~~~~--- 262 (313)
T 3brb_A 187 CVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE-MYDYL--- 262 (313)
T ss_dssp EECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG-HHHHH---
T ss_pred EEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH-HHHHH---
Confidence 999999998765433222 223457889999999998899999999999999999999 888886532111 00000
Q ss_pred chhhhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHH
Q 002214 882 SLPAVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLL 945 (952)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~ 945 (952)
..... ...+..+++++.+++.+||+.||++|||+.|++++|+++.+++
T Consensus 263 --------~~~~~--------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l 310 (313)
T 3brb_A 263 --------LHGHR--------LKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310 (313)
T ss_dssp --------HTTCC--------CCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred --------HcCCC--------CCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 00000 0112346778999999999999999999999999999998765
No 151
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.1e-39 Score=360.84 Aligned_cols=266 Identities=14% Similarity=0.153 Sum_probs=209.9
Q ss_pred hccCCccceecCccceEEEEEEeCC---------CcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccce---------
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFPD---------GIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVK--------- 724 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~--------- 724 (952)
.++|.+.+.||+|+||.||+|++.. ++.||||++... +.+.+|++++++++|||+++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 3689999999999999999998853 789999998643 45789999999999999998
Q ss_pred ------eeeEeec-CCeeEEEEEccCCCChhHHhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCee
Q 002214 725 ------IISSCTN-HNFKALVLEYMPKGSLEDCMYAS-NFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVL 796 (952)
Q Consensus 725 ------l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nil 796 (952)
+++++.. ++..++||||+ +++|.+++... ...+++.+++.++.|++.||+|| |++||+||||||+||+
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dikp~NIl 191 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFL---HENEYVHGNVTAENIF 191 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHH---HHTTCBCSCCCGGGEE
T ss_pred ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHH---HhCCccCCCCCHHHEE
Confidence 5667665 67889999999 99999999865 34799999999999999999999 7889999999999999
Q ss_pred eCCCC--cEEEeccccccccCCcCcc------cccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCcc
Q 002214 797 LDDSM--VAHLSDFGIAKLLSEEDSM------KQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEF 868 (952)
Q Consensus 797 l~~~~--~~kl~Dfgla~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~ 868 (952)
++.++ .+||+|||+|+.+...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 271 (352)
T 2jii_A 192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNC 271 (352)
T ss_dssp EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 99998 9999999999876543221 112347999999999999989999999999999999999999999764
Q ss_pred ccCccchhhhhccchhhhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHHhh
Q 002214 869 FTGEMSIKRWINDSLPAVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLLFA 947 (952)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~~~ 947 (952)
......................+... ....+++++.+++.+||+.||++||++.|+++.|+++.++...
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~ 340 (352)
T 2jii_A 272 LPNTEDIMKQKQKFVDKPGPFVGPCG----------HWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRV 340 (352)
T ss_dssp TTCHHHHHHHHHHHHHSCCCEECTTS----------CEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred CcCHHHHHHHHHhccCChhhhhhhcc----------ccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCC
Confidence 32222222111110000000000000 0123467899999999999999999999999999999887643
No 152
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=2.8e-39 Score=357.69 Aligned_cols=274 Identities=24% Similarity=0.344 Sum_probs=200.6
Q ss_pred hccCCccceecCccceEEEEEEeCCCcEEEEEEeeccCchhhHHHHHHHHH--HHhCCCCccceeeeEeec-----CCee
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQREGALNSFDAECEI--LKTIRHRNLVKIISSCTN-----HNFK 735 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~l~~~~~~-----~~~~ 735 (952)
.++|++.+.||+|+||.||+|+. +++.||||++..... ..+..|.++ +..++||||+++++.+.. ....
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 87 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY 87 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccch---hhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence 46899999999999999999987 789999999865432 334445555 445899999999985532 3366
Q ss_pred EEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCC---------CeEeCCCCCCCeeeCCCCcEEEe
Q 002214 736 ALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSN---------PIVHCDIKPSNVLLDDSMVAHLS 806 (952)
Q Consensus 736 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~---------~ivH~Dlk~~Nill~~~~~~kl~ 806 (952)
++||||+++|+|.+++.... .++..+..++.|+++||+|| |+. ||+||||||+||+++.++.+||+
T Consensus 88 ~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~L---H~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~ 162 (336)
T 3g2f_A 88 LLVMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYL---HTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVIS 162 (336)
T ss_dssp EEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHH---HCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEEC
T ss_pred EEEEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHH---HhhhccccccccceeecccccceEEEcCCCcEEEe
Confidence 89999999999999997654 58999999999999999999 566 99999999999999999999999
Q ss_pred ccccccccCCcCc-------ccccccccccccccccccCc-------CCcCcccchHhHHHHHHHHHhCCCCCCccccCc
Q 002214 807 DFGIAKLLSEEDS-------MKQTQTLATIGYIAPEYGRE-------GQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGE 872 (952)
Q Consensus 807 Dfgla~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~-------~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~ 872 (952)
|||+|+.+..... .......||+.|+|||++.+ ..++.++|||||||++|||++|..||.......
T Consensus 163 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~ 242 (336)
T 3g2f_A 163 DFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVP 242 (336)
T ss_dssp CCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCC
T ss_pred eccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchh
Confidence 9999987653321 11223569999999998876 456788999999999999999988764322211
Q ss_pred cchhhhh---c--cchhhhhhhccccc-cchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHHh
Q 002214 873 MSIKRWI---N--DSLPAVMNIMDTNL-LSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLLF 946 (952)
Q Consensus 873 ~~~~~~~---~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~~ 946 (952)
.....+. . .........+.... ....+. .......+++++.+++.+||+.||++|||++|+++.|+++.+.+.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~ 321 (336)
T 3g2f_A 243 EYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPE-AWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWE 321 (336)
T ss_dssp CCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCT-TCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCC
T ss_pred HHHHhhhcccCCCchHHHHHhhhcccccCCCCCc-ccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHH
Confidence 1111100 0 00001111111000 000000 000123367789999999999999999999999999999987654
No 153
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=6.1e-38 Score=359.50 Aligned_cols=363 Identities=19% Similarity=0.205 Sum_probs=249.3
Q ss_pred cccCCccccCCcccCeeeccccccccccCCCcCCcCCCcEEeCcCCcccccCChhhcCCCCCCeEeecCccCccccCccc
Q 002214 46 AGTIPSHLGNLSSLQTLVLSRNWFSGTIPKEIGNLTKLKELHLDYNKLQGEIPEELGNLAELEMLVLNNNLLTGTIPASI 125 (952)
Q Consensus 46 ~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~ 125 (952)
.+..+..++.+++|++|++++|.+++ +| .++.+++|++|+|++|++++ +| ++++++|++|+|++|++++ +|
T Consensus 31 ~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~-~~--- 101 (457)
T 3bz5_A 31 QATDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTN-LD--- 101 (457)
T ss_dssp CTTSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC-CC---
T ss_pred CcccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCce-ee---
Confidence 33445566777777777777777774 45 57777777777777777774 33 6777777777777777662 11
Q ss_pred ccccccccceeeccccccccCCCCCCCCCCccceEEcccCcccccCCccccCCCCCcEEEccCCcccccCCccccccCCc
Q 002214 126 FNLSFISTALDFSDNSLTGSFPYDMCPGLPRLKGLYVSYNQFKGPIPNNLWHCKELSSVSLSYNQFTGRLPRDLGNSTKL 205 (952)
Q Consensus 126 ~~l~~l~~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 205 (952)
+..+++|++|++++|++++ +| +..+++|+.|++++|++++. + ++.+++|
T Consensus 102 -------------------------~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L 150 (457)
T 3bz5_A 102 -------------------------VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQL 150 (457)
T ss_dssp -------------------------CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTC
T ss_pred -------------------------cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcC
Confidence 2345667777777777664 33 66667777777777777653 2 6666777
Q ss_pred cEEEeeCCcCCccCchhhhccCCCcEeeeccccccccCCccccCCCCccEEEeeCccccccCCCCcccCCCCCcceEEcc
Q 002214 206 KSLDLGFNNLNGEIPQEIGNLRNLEILGIDQSNLVGFVPDTIFNISTLKILSLFNNTLSGNLPSSKNLIGLPNLEGLNLG 285 (952)
Q Consensus 206 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~L~~L~L~ 285 (952)
++|++++|...+.+ .++.+++|+.|++++|++.++ | +..+++|+.|++++|++++. .+..+++|++|+++
T Consensus 151 ~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~l-~--l~~l~~L~~L~l~~N~l~~~-----~l~~l~~L~~L~Ls 220 (457)
T 3bz5_A 151 TELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITEL-D--VSQNKLLNRLNCDTNNITKL-----DLNQNIQLTFLDCS 220 (457)
T ss_dssp CEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCCC-C--CTTCTTCCEEECCSSCCSCC-----CCTTCTTCSEEECC
T ss_pred CEEECCCCCccccc--ccccCCcCCEEECCCCcccee-c--cccCCCCCEEECcCCcCCee-----ccccCCCCCEEECc
Confidence 77777777443333 356666666666666666664 2 55666667777777666643 25556666666666
Q ss_pred cCcCCCCCCcccccchhhhhhhccccCccccccccCcceeechhhHHHHHHHhhccccccccCCCcccEEEccCCCCCCC
Q 002214 286 LNNLSGSIPSFFFNASKLYALELGYNSNLKRLGLERNYLTFSTSELMSLFSALVNCKSLKIGNLINLTTLSLGDNNLSGS 365 (952)
Q Consensus 286 ~N~l~~~~~~~~~~~~~L~~l~l~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~ 365 (952)
+|+++++ | ++.+++|+.|++++|++++.
T Consensus 221 ~N~l~~i-p---------------------------------------------------~~~l~~L~~L~l~~N~l~~~ 248 (457)
T 3bz5_A 221 SNKLTEI-D---------------------------------------------------VTPLTQLTYFDCSVNPLTEL 248 (457)
T ss_dssp SSCCSCC-C---------------------------------------------------CTTCTTCSEEECCSSCCSCC
T ss_pred CCccccc-C---------------------------------------------------ccccCCCCEEEeeCCcCCCc
Confidence 6666642 2 23455677777777777754
Q ss_pred CCcccccCCCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCccCCCCCCcEEeccccccCCcCCccccCC
Q 002214 366 LPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLRILSLSSNELTSVIPSTFWNL 445 (952)
Q Consensus 366 ~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 445 (952)
. +..+++|+.|++++|. |+.|++++|.+.+.+| ++.+++|+.|++++|.+.+.+|. ..
T Consensus 249 ~---~~~l~~L~~L~l~~n~--------------L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~---~~ 306 (457)
T 3bz5_A 249 D---VSTLSKLTTLHCIQTD--------------LLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDC---QA 306 (457)
T ss_dssp C---CTTCTTCCEEECTTCC--------------CSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEEC---TT
T ss_pred C---HHHCCCCCEEeccCCC--------------CCEEECCCCccCCccc--ccccccCCEEECCCCcccceecc---CC
Confidence 3 3456667777776654 3456677777666665 46778888888888887766553 34
Q ss_pred CCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEccCccccCcccccccccccccEEeC
Q 002214 446 EDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNKLQGPIPESFGELVSLEFLDL 525 (952)
Q Consensus 446 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 525 (952)
++|+.|++++| ++|+.|++++|++++. .+..+++|+.|++++|+|++ ++.|..|++
T Consensus 307 ~~L~~L~l~~~-------------~~L~~L~L~~N~l~~l---~l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l 362 (457)
T 3bz5_A 307 AGITELDLSQN-------------PKLVYLYLNNTELTEL---DVSHNTKLKSLSCVNAHIQD--------FSSVGKIPA 362 (457)
T ss_dssp CCCSCCCCTTC-------------TTCCEEECTTCCCSCC---CCTTCTTCSEEECCSSCCCB--------CTTGGGSSG
T ss_pred CcceEechhhc-------------ccCCEEECCCCccccc---ccccCCcCcEEECCCCCCCC--------ccccccccc
Confidence 56666666555 6789999999999974 38899999999999999985 256777889
Q ss_pred CCCcccccCccchhcccccccccccccccccCCCCC
Q 002214 526 SNNDLSGVIPASLEKLLYLKSLNLSFNKLVGEIPRG 561 (952)
Q Consensus 526 s~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~ 561 (952)
++|.+++. ..+..|..+++++|+++|.+|..
T Consensus 363 ~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~ 393 (457)
T 3bz5_A 363 LNNNFEAE-----GQTITMPKETLTNNSLTIAVSPD 393 (457)
T ss_dssp GGTSEEEE-----EEEEECCCBCCBTTBEEEECCTT
T ss_pred cCCcEEec-----ceeeecCccccccCcEEEEcChh
Confidence 99999875 35678889999999999999963
No 154
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.4e-40 Score=362.56 Aligned_cols=267 Identities=22% Similarity=0.361 Sum_probs=190.8
Q ss_pred hccCCccceecCccceEEEEEEeCCCcEEEEEEeeccCchhhHHHHHHHHHHHh--CCCCccceeeeEeecCC----eeE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQREGALNSFDAECEILKT--IRHRNLVKIISSCTNHN----FKA 736 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~~~ 736 (952)
.++|.+.+.||+|+||.||+|++ +|+.||||++.... ...+.+|.+++.. ++||||+++++++.... ..+
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 77 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-C-TTSCEEEEECC-TT---HHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred cceeeehhhccCCCCeEEEEEEE-cCcceEEEEecccc---hhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence 36799999999999999999987 58999999986433 3567788888887 79999999999998776 789
Q ss_pred EEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-----cCCCCeEeCCCCCCCeeeCCCCcEEEeccccc
Q 002214 737 LVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHF-----GHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIA 811 (952)
Q Consensus 737 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~-----~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla 811 (952)
+||||+++|+|.+++... .+++..+..++.|++.|++|||. .|++||+||||||+||+++.++.+||+|||+|
T Consensus 78 lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a 155 (303)
T 3gxj_A 78 LVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp EEEECCTTCCHHHHHHHC--CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-
T ss_pred EEEeccCCCCHHHHHhcc--CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCcc
Confidence 999999999999999654 48888999999999999999931 11999999999999999999999999999999
Q ss_pred cccCCcCccc---ccccccccccccccccCcC------CcCcccchHhHHHHHHHHHhC----------CCCCCccccCc
Q 002214 812 KLLSEEDSMK---QTQTLATIGYIAPEYGREG------QVSIKGDVYNYGIMLMEVFTG----------MKPTNEFFTGE 872 (952)
Q Consensus 812 ~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slG~~l~el~tg----------~~p~~~~~~~~ 872 (952)
+......... .....||+.|+|||++.+. .++.++|||||||++|||++| ..||.......
T Consensus 156 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~ 235 (303)
T 3gxj_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-C
T ss_pred eeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCC
Confidence 7654433221 2234699999999988766 455789999999999999999 44443322221
Q ss_pred cchhhhhccchhhhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 002214 873 MSIKRWINDSLPAVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDL 944 (952)
Q Consensus 873 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~ 944 (952)
....... ............+. ......+++.+.+++.+||+.||++|||+.|+++.|+++.++
T Consensus 236 ~~~~~~~-------~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~ 298 (303)
T 3gxj_A 236 PSVEEMR-------KVVCEQKLRPNIPN--RWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp CCCC-CH-------HHHTTSCCCCCCCG--GGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC
T ss_pred ccHHHHH-------HHHHHhhcCCCccc--cccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhh
Confidence 1111110 01111111111111 011235677899999999999999999999999999988654
No 155
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=5.6e-39 Score=357.60 Aligned_cols=253 Identities=23% Similarity=0.287 Sum_probs=195.2
Q ss_pred hccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEEEc
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVLEY 741 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 741 (952)
.++|++.+.||+|+||+||+|+.. +++.||||++..... ..+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 468999999999999999999985 789999999865432 236788999999999999999999999999999999999
Q ss_pred cCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCc--EEEeccccccccCCcCc
Q 002214 742 MPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMV--AHLSDFGIAKLLSEEDS 819 (952)
Q Consensus 742 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~--~kl~Dfgla~~~~~~~~ 819 (952)
+++|+|.+++...+ .+++..+..++.|+++||+|| |++||+||||||+||+++.++. +||+|||+|+......
T Consensus 98 ~~~~~L~~~l~~~~-~~~~~~~~~i~~ql~~~L~~L---H~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~- 172 (361)
T 3uc3_A 98 ASGGELYERICNAG-RFSEDEARFFFQQLLSGVSYC---HSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS- 172 (361)
T ss_dssp CCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC--------
T ss_pred CCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccC-
Confidence 99999999887654 699999999999999999999 7899999999999999987765 9999999998543222
Q ss_pred ccccccccccccccccccCcCCcCcc-cchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccchh
Q 002214 820 MKQTQTLATIGYIAPEYGREGQVSIK-GDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSED 898 (952)
Q Consensus 820 ~~~~~~~~~~~y~aPE~~~~~~~~~~-~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 898 (952)
......||+.|+|||++.+..++.+ +||||+||++|||++|+.||....... .+..... ..........
T Consensus 173 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-~~~~~~~-------~~~~~~~~~~- 242 (361)
T 3uc3_A 173 -QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR-DYRKTIQ-------RILSVKYSIP- 242 (361)
T ss_dssp ---------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC-CHHHHHH-------HHHTTCCCCC-
T ss_pred -CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH-HHHHHHH-------HHhcCCCCCC-
Confidence 2233569999999999887777555 899999999999999999996532211 1111111 0010000000
Q ss_pred hHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 899 EEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 899 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
....+++++.+++.+||+.||++|||+.|++++
T Consensus 243 ------~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 243 ------DDIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp ------TTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred ------CcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 011346789999999999999999999999876
No 156
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=5.4e-39 Score=345.20 Aligned_cols=250 Identities=23% Similarity=0.395 Sum_probs=187.3
Q ss_pred hccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccC---chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQR---EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALV 738 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 738 (952)
.++|.+.+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 46799999999999999999987 579999999986442 22346789999999999999999999999999999999
Q ss_pred EEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcC
Q 002214 739 LEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEED 818 (952)
Q Consensus 739 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 818 (952)
|||+++++|.+++......+++..+..++.|+++|++|| |++||+||||||+||+++.++.+||+|||++.......
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 166 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYL---HSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH 166 (278)
T ss_dssp EECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHH---HHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred EecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence 999999999999987766799999999999999999999 78899999999999999999999999999998764332
Q ss_pred cccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccchh
Q 002214 819 SMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSED 898 (952)
Q Consensus 819 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 898 (952)
. ......+|+.|+|||.+.+..++.++||||||+++|||++|+.||....... ..... .....
T Consensus 167 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~-----------~~~~~---- 229 (278)
T 3cok_A 167 E-KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKN-TLNKV-----------VLADY---- 229 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC------C-----------CSSCC----
T ss_pred C-cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHH-HHHHH-----------hhccc----
Confidence 2 2223568999999999998889999999999999999999999986532111 00000 00000
Q ss_pred hHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 899 EEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 899 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
..+..++.++.+++.+||+.||++|||+.|++++
T Consensus 230 -----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 230 -----EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp -----CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred -----CCccccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 0122356779999999999999999999999874
No 157
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=6.2e-40 Score=360.67 Aligned_cols=271 Identities=23% Similarity=0.406 Sum_probs=217.4
Q ss_pred cCHHHHHHHhccCCccceecCccceEEEEEEeC------CCcEEEEEEeeccCc-hhhHHHHHHHHHHHhCCCCccceee
Q 002214 654 YSHDELLRATDQFSEENLIGIGSYGSVYKGRFP------DGIEVAIKVFHLQRE-GALNSFDAECEILKTIRHRNLVKII 726 (952)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~ 726 (952)
+..+++....++|++.+.||+|+||.||+|++. +++.||||++..... .....+.+|+.++++++||||++++
T Consensus 15 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 94 (322)
T 1p4o_A 15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL 94 (322)
T ss_dssp CCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEE
T ss_pred cChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeE
Confidence 344455566789999999999999999999764 378899999865433 3345788999999999999999999
Q ss_pred eEeecCCeeEEEEEccCCCChhHHhhhcC---------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeee
Q 002214 727 SSCTNHNFKALVLEYMPKGSLEDCMYASN---------FNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLL 797 (952)
Q Consensus 727 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~---------~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill 797 (952)
+++.+.+..++||||+++|+|.+++.... ..+++..++.++.|++.||+|| |++||+||||||+||++
T Consensus 95 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dikp~NIli 171 (322)
T 1p4o_A 95 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYL---NANKFVHRDLAARNCMV 171 (322)
T ss_dssp EEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHH---HHTTCBCSCCSGGGEEE
T ss_pred EEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHH---HHCCCccCCCccceEEE
Confidence 99999999999999999999999987532 3578999999999999999999 78899999999999999
Q ss_pred CCCCcEEEeccccccccCCcCcc-cccccccccccccccccCcCCcCcccchHhHHHHHHHHHh-CCCCCCccccCccch
Q 002214 798 DDSMVAHLSDFGIAKLLSEEDSM-KQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFT-GMKPTNEFFTGEMSI 875 (952)
Q Consensus 798 ~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~ 875 (952)
+.++.+||+|||+++........ ......+|+.|+|||++.+..++.++||||||+++|||++ |..||...... ..
T Consensus 172 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~ 249 (322)
T 1p4o_A 172 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE--QV 249 (322)
T ss_dssp CTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH--HH
T ss_pred cCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH--HH
Confidence 99999999999999866443322 2223457889999999988889999999999999999999 88888652111 00
Q ss_pred hhhhccchhhhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHHhh
Q 002214 876 KRWINDSLPAVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLLFA 947 (952)
Q Consensus 876 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~~~ 947 (952)
.. ........ ..+..++.++.+++.+||+.||++|||+.|++++|+++.+....
T Consensus 250 ~~----------~~~~~~~~--------~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~~~ 303 (322)
T 1p4o_A 250 LR----------FVMEGGLL--------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFR 303 (322)
T ss_dssp HH----------HHHTTCCC--------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHH
T ss_pred HH----------HHHcCCcC--------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhccCCc
Confidence 00 00111110 01234677899999999999999999999999999887554433
No 158
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1e-38 Score=342.92 Aligned_cols=252 Identities=23% Similarity=0.312 Sum_probs=207.4
Q ss_pred HhccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEEE
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVLE 740 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 740 (952)
..++|++.+.||+|+||.||+|.+. +++.||+|++........+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME 86 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence 3467999999999999999999884 578999999977655556789999999999999999999999999999999999
Q ss_pred ccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeee---CCCCcEEEeccccccccCCc
Q 002214 741 YMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLL---DDSMVAHLSDFGIAKLLSEE 817 (952)
Q Consensus 741 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill---~~~~~~kl~Dfgla~~~~~~ 817 (952)
|+++++|.+++.... .+++..+..++.|++.|++|| |++||+||||||+||++ +.++.+||+|||++......
T Consensus 87 ~~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~ 162 (277)
T 3f3z_A 87 LCTGGELFERVVHKR-VFRESDAARIMKDVLSAVAYC---HKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG 162 (277)
T ss_dssp CCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTT
T ss_pred ccCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCc
Confidence 999999999887654 589999999999999999999 78999999999999999 78899999999999876543
Q ss_pred CcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccch
Q 002214 818 DSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSE 897 (952)
Q Consensus 818 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 897 (952)
.. .....+|+.|+|||.+.+ .++.++||||||+++|||++|+.||......+ .... .........
T Consensus 163 ~~--~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~-----------~~~~~~~~~ 227 (277)
T 3f3z_A 163 KM--MRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSE-VMLK-----------IREGTFTFP 227 (277)
T ss_dssp SC--BCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHH-----------HHHCCCCCC
T ss_pred cc--hhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHH-HHHH-----------HHhCCCCCC
Confidence 32 233569999999998865 48999999999999999999999986532111 0000 111111000
Q ss_pred hhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 898 DEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 898 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
. .....+++++.+++.+||+.||++|||+.|++++
T Consensus 228 ~-----~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 228 E-----KDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp H-----HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred c-----hhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 0112457789999999999999999999999864
No 159
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.6e-39 Score=360.53 Aligned_cols=264 Identities=17% Similarity=0.182 Sum_probs=201.8
Q ss_pred hccCCccceecCccceEEEEEEeC----CCcEEEEEEeeccCch-----------hhHHHHHHHHHHHhCCCCccceeee
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP----DGIEVAIKVFHLQREG-----------ALNSFDAECEILKTIRHRNLVKIIS 727 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~l~~ 727 (952)
.++|.+.+.||+|+||.||+|.+. ++..||||+....... ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 467999999999999999999985 5788999998754321 1234668889999999999999999
Q ss_pred Eeec----CCeeEEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCC--
Q 002214 728 SCTN----HNFKALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSM-- 801 (952)
Q Consensus 728 ~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~-- 801 (952)
++.. ....++||||+ +++|.+++...+ .+++.+++.++.|++.||+|| |++||+||||||+||+++.++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~ 190 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYI---HENEYVHGDIKAANLLLGYKNPD 190 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEESSSTT
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeeCCCcCHHHEEEccCCCC
Confidence 9887 67899999999 999999987665 799999999999999999999 788999999999999998887
Q ss_pred cEEEeccccccccCCcCcc------cccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccch
Q 002214 802 VAHLSDFGIAKLLSEEDSM------KQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSI 875 (952)
Q Consensus 802 ~~kl~Dfgla~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~ 875 (952)
.+||+|||+|+.+...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..........
T Consensus 191 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~ 270 (345)
T 2v62_A 191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAV 270 (345)
T ss_dssp SEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHH
T ss_pred cEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHH
Confidence 9999999999876533211 1133569999999999998889999999999999999999999996532222211
Q ss_pred hhhhccchhhhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 002214 876 KRWINDSLPAVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKI 941 (952)
Q Consensus 876 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i 941 (952)
........+..... .. .......+++++.+++.+||+.||++||++.+|++.|+++
T Consensus 271 ~~~~~~~~~~~~~~--------~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 326 (345)
T 2v62_A 271 QTAKTNLLDELPQS--------VL--KWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPH 326 (345)
T ss_dssp HHHHHHHHHTTTHH--------HH--HHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTT
T ss_pred HHHHHhhcccccHH--------HH--hhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhcc
Confidence 11111111000000 00 0000115678899999999999999999999999999764
No 160
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.1e-38 Score=347.98 Aligned_cols=261 Identities=19% Similarity=0.251 Sum_probs=201.9
Q ss_pred HhccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccC---chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEE
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQR---EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKAL 737 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 737 (952)
..++|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|+.++++++||||+++++++..++..++
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYV 111 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence 3578999999999999999999974 68999999986542 2234678999999999999999999999999999999
Q ss_pred EEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCc
Q 002214 738 VLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEE 817 (952)
Q Consensus 738 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 817 (952)
||||+++++|.+++.... .+++..+..++.|+++||+|| |++||+||||||+||+++.++.+||+|||++......
T Consensus 112 v~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 187 (309)
T 2h34_A 112 DMRLINGVDLAAMLRRQG-PLAPPRAVAIVRQIGSALDAA---HAAGATHRDVKPENILVSADDFAYLVDFGIASATTDE 187 (309)
T ss_dssp EEECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred EEEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCcCCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence 999999999999987654 689999999999999999999 7889999999999999999999999999999876544
Q ss_pred CcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccch
Q 002214 818 DSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSE 897 (952)
Q Consensus 818 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 897 (952)
.........+++.|+|||.+.+..++.++||||||+++|||++|+.||...... .... .+......
T Consensus 188 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~-----------~~~~~~~~- 253 (309)
T 2h34_A 188 KLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMGA-----------HINQAIPR- 253 (309)
T ss_dssp ---------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHHH-----------HHHSCCCC-
T ss_pred ccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHHH-----------HhccCCCC-
Confidence 333334467999999999999889999999999999999999999998652111 0000 00000000
Q ss_pred hhHHHHHhhhhhHHHHHHHHhhccccCCCCCC-CHHHHHHHHHHHHHH
Q 002214 898 DEEHANVAKQSCASSVLSLAMECTSESPENRV-NTKEIISRLIKIRDL 944 (952)
Q Consensus 898 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~ev~~~L~~i~~~ 944 (952)
....+..++.++.+++.+||+.||++|| +++++++.|++..+.
T Consensus 254 ----~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~ 297 (309)
T 2h34_A 254 ----PSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALAT 297 (309)
T ss_dssp ----GGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC-
T ss_pred ----ccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHh
Confidence 0012345677899999999999999999 999999999876443
No 161
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=4e-39 Score=369.05 Aligned_cols=248 Identities=26% Similarity=0.428 Sum_probs=206.3
Q ss_pred hccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccC---chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQR---EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALV 738 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 738 (952)
.++|.+.+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|+.+++.++||||+++++++...+..++|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 357999999999999999999985 79999999986542 22346789999999999999999999999999999999
Q ss_pred EEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcC
Q 002214 739 LEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEED 818 (952)
Q Consensus 739 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 818 (952)
|||+++|+|.+++...+ .+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++......
T Consensus 95 ~E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~L---H~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~ 170 (476)
T 2y94_A 95 MEYVSGGELFDYICKNG-RLDEKESRRLFQQILSGVDYC---HRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170 (476)
T ss_dssp EECCSSEEHHHHTTSSS-SCCHHHHHHHHHHHHHHHHHH---HTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC
T ss_pred EeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCCCcccccHHHEEEecCCCeEEEeccchhhccccc
Confidence 99999999999987543 699999999999999999999 78999999999999999999999999999998765432
Q ss_pred cccccccccccccccccccCcCCc-CcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccch
Q 002214 819 SMKQTQTLATIGYIAPEYGREGQV-SIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSE 897 (952)
Q Consensus 819 ~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 897 (952)
. ....+||+.|+|||++.+..+ +.++||||+||++|||++|+.||...... .... .+.+...
T Consensus 171 ~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~-~~~~-----------~i~~~~~--- 233 (476)
T 2y94_A 171 F--LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP-TLFK-----------KICDGIF--- 233 (476)
T ss_dssp C--BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH-HHHH-----------HHHTTCC---
T ss_pred c--ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH-HHHH-----------HHhcCCc---
Confidence 2 234579999999999887765 68999999999999999999998652111 0001 1111110
Q ss_pred hhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 898 DEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 898 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
..+..+++++.+++.+||..||++|||+.|++++
T Consensus 234 ------~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 234 ------YTPQYLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp ------CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred ------CCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 0123356789999999999999999999999874
No 162
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.5e-39 Score=354.57 Aligned_cols=258 Identities=24% Similarity=0.406 Sum_probs=203.5
Q ss_pred hccCCccceecCccceEEEEEEeC-CCcE----EEEEEeecc-CchhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP-DGIE----VAIKVFHLQ-REGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKA 736 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 736 (952)
.++|++.+.||+|+||+||+|++. +++. ||+|.+... .....+.+.+|+.++++++||||+++++++.... .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 357999999999999999999873 4543 577766433 3344578999999999999999999999998765 78
Q ss_pred EEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCC
Q 002214 737 LVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSE 816 (952)
Q Consensus 737 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~ 816 (952)
+|+||+++|+|.+++......+++..++.++.|++.||+|| |++||+||||||+||+++.++.+||+|||+|+....
T Consensus 93 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~ 169 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEEEETTEEEECCTTC------
T ss_pred EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---hhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccC
Confidence 99999999999999988777899999999999999999999 788999999999999999999999999999987654
Q ss_pred cCcc-cccccccccccccccccCcCCcCcccchHhHHHHHHHHHh-CCCCCCccccCccchhhhhccchhhhhhhccccc
Q 002214 817 EDSM-KQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFT-GMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNL 894 (952)
Q Consensus 817 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 894 (952)
.... ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||......+ .... +....
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~~~~-----------~~~~~ 236 (327)
T 3lzb_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISSI-----------LEKGE 236 (327)
T ss_dssp ----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHH-----------HHTTC
T ss_pred ccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--HHHH-----------HHcCC
Confidence 3221 2223457889999999999999999999999999999999 999986532211 1111 11110
Q ss_pred cchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 002214 895 LSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDL 944 (952)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~ 944 (952)
. ...+..++.++.+++.+||+.||++||++.|+++.|+++.+.
T Consensus 237 ~-------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 237 R-------LPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp C-------CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred C-------CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 0 001234577899999999999999999999999999998754
No 163
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=3.9e-39 Score=356.05 Aligned_cols=266 Identities=21% Similarity=0.358 Sum_probs=214.7
Q ss_pred HHHhccCCccceecCccceEEEEEEeCC------CcEEEEEEeeccCc-hhhHHHHHHHHHHHhC-CCCccceeeeEeec
Q 002214 660 LRATDQFSEENLIGIGSYGSVYKGRFPD------GIEVAIKVFHLQRE-GALNSFDAECEILKTI-RHRNLVKIISSCTN 731 (952)
Q Consensus 660 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 731 (952)
....++|.+.+.||+|+||.||+|.+.. ++.||+|++..... ...+.+.+|+.+++++ +||||+++++++..
T Consensus 42 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 121 (333)
T 2i1m_A 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH 121 (333)
T ss_dssp BCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred cCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec
Confidence 3446789999999999999999998732 34899999875532 3456789999999999 89999999999999
Q ss_pred CCeeEEEEEccCCCChhHHhhhc-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeC
Q 002214 732 HNFKALVLEYMPKGSLEDCMYAS-------------NFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLD 798 (952)
Q Consensus 732 ~~~~~lv~e~~~~g~L~~~l~~~-------------~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~ 798 (952)
.+..++||||+++|+|.+++... ...+++..++.++.|++.||+|| |++||+||||||+||+++
T Consensus 122 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dlkp~NIl~~ 198 (333)
T 2i1m_A 122 GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLT 198 (333)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGCEEE
T ss_pred CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHH---hcCCcccCCcccceEEEC
Confidence 99999999999999999998653 23579999999999999999999 788999999999999999
Q ss_pred CCCcEEEeccccccccCCcCcc-cccccccccccccccccCcCCcCcccchHhHHHHHHHHHh-CCCCCCccccCccchh
Q 002214 799 DSMVAHLSDFGIAKLLSEEDSM-KQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFT-GMKPTNEFFTGEMSIK 876 (952)
Q Consensus 799 ~~~~~kl~Dfgla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~ 876 (952)
.++.+||+|||+++........ ......+|+.|+|||.+.+..++.++|||||||++|||+| |..||........ ..
T Consensus 199 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~-~~ 277 (333)
T 2i1m_A 199 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK-FY 277 (333)
T ss_dssp GGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHH-HH
T ss_pred CCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHH-HH
Confidence 9999999999999865433222 2223457889999999988899999999999999999999 8999865322111 11
Q ss_pred hhhccchhhhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHHhh
Q 002214 877 RWINDSLPAVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLLFA 947 (952)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~~~ 947 (952)
.. +...... ..+..+++++.+++.+||+.||++|||+.|++++|+++......
T Consensus 278 ~~-----------~~~~~~~-------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~ 330 (333)
T 2i1m_A 278 KL-----------VKDGYQM-------AQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDRR 330 (333)
T ss_dssp HH-----------HHHTCCC-------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred HH-----------HhcCCCC-------CCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhhhc
Confidence 11 0000000 01233567899999999999999999999999999998776544
No 164
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=9.2e-39 Score=350.85 Aligned_cols=252 Identities=21% Similarity=0.329 Sum_probs=207.1
Q ss_pred hccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccCch------hhHHHHHHHHHHHhCCCCccceeeeEeecCCee
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQREG------ALNSFDAECEILKTIRHRNLVKIISSCTNHNFK 735 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 735 (952)
.++|++.+.||+|+||.||+|++. +|+.||||++...... ..+.+.+|+.++++++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 467999999999999999999985 6899999998654321 356789999999999999999999999999999
Q ss_pred EEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCC----cEEEeccccc
Q 002214 736 ALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSM----VAHLSDFGIA 811 (952)
Q Consensus 736 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~----~~kl~Dfgla 811 (952)
++||||+++++|.+++... ..+++..+..++.|++.||+|| |++||+||||||+||+++.++ .+||+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~l---H~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~ 166 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYL---HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (321)
T ss_dssp EEEECCCCSCBHHHHHHTC-SCEEHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred EEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence 9999999999999998754 3689999999999999999999 788999999999999999888 7999999999
Q ss_pred cccCCcCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhcc
Q 002214 812 KLLSEEDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMD 891 (952)
Q Consensus 812 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 891 (952)
+....... .....||+.|+|||.+.+..++.++||||||+++|||++|+.||......+ ... .+..
T Consensus 167 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~-----------~i~~ 232 (321)
T 2a2a_A 167 HEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE-TLA-----------NITS 232 (321)
T ss_dssp EECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH-HHH-----------HHHT
T ss_pred eecCcccc--ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHH-HHH-----------HHHh
Confidence 87654322 234569999999999998899999999999999999999999986521110 000 0000
Q ss_pred ccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 892 TNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
... .. .......++.++.+++.+||+.||++|||+.|++++
T Consensus 233 ~~~-~~----~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 233 VSY-DF----DEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp TCC-CC----CHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred ccc-cc----ChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000 00 011123457789999999999999999999999874
No 165
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.1e-39 Score=354.98 Aligned_cols=243 Identities=23% Similarity=0.333 Sum_probs=204.0
Q ss_pred HhccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccCc--------hhhHHHHHHHHHHHhCCCCccceeeeEeecC
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQRE--------GALNSFDAECEILKTIRHRNLVKIISSCTNH 732 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 732 (952)
..++|++.+.||+|+||.||+|++ .+++.||||+++.... .....+.+|+.++++++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 457899999999999999999986 5689999999875431 1234677899999999999999999999999
Q ss_pred CeeEEEEEccCCC-ChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccc
Q 002214 733 NFKALVLEYMPKG-SLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIA 811 (952)
Q Consensus 733 ~~~~lv~e~~~~g-~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla 811 (952)
+..++||||+.+| +|.+++.... .+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||++
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~-~l~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 177 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHP-RLDEPLASYIFRQLVSAVGYL---RLKDIIHRDIKDENIVIAEDFTIKLIDFGSA 177 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCC-CCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred CEEEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeEEeccCHHHEEEcCCCcEEEeecccc
Confidence 9999999999777 9999887654 699999999999999999999 7889999999999999999999999999999
Q ss_pred cccCCcCcccccccccccccccccccCcCCc-CcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhc
Q 002214 812 KLLSEEDSMKQTQTLATIGYIAPEYGREGQV-SIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIM 890 (952)
Q Consensus 812 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 890 (952)
+....... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||...... .
T Consensus 178 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------------------~ 237 (335)
T 3dls_A 178 AYLERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET------------------V 237 (335)
T ss_dssp EECCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG------------------T
T ss_pred eECCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH------------------H
Confidence 87654332 233569999999999887776 88999999999999999999998652110 0
Q ss_pred cccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 891 DTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
.... ..+..+++++.+++.+||+.||++|||+.|++++
T Consensus 238 ~~~~---------~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 238 EAAI---------HPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp TTCC---------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred hhcc---------CCCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000 0112246779999999999999999999999986
No 166
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.2e-39 Score=381.62 Aligned_cols=260 Identities=23% Similarity=0.389 Sum_probs=208.4
Q ss_pred cCCccc-eecCccceEEEEEEeC---CCcEEEEEEeeccC-chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEE
Q 002214 665 QFSEEN-LIGIGSYGSVYKGRFP---DGIEVAIKVFHLQR-EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVL 739 (952)
Q Consensus 665 ~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 739 (952)
++.+.+ .||+|+||.||+|.+. ++..||||+++... ....+.+.+|++++++++|||||++++++.. +..++||
T Consensus 336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~ 414 (613)
T 2ozo_A 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVM 414 (613)
T ss_dssp SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEE
T ss_pred ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEE
Confidence 344444 7999999999999763 56789999997543 3346789999999999999999999999976 5689999
Q ss_pred EccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcCc
Q 002214 740 EYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEEDS 819 (952)
Q Consensus 740 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 819 (952)
||+++|+|.+++......+++..+..++.||+.||+|| |+++|+||||||+|||++.++.+||+|||+|+.......
T Consensus 415 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~L---H~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~ 491 (613)
T 2ozo_A 415 EMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYL---EEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDS 491 (613)
T ss_dssp ECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC----
T ss_pred EeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH---HHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCc
Confidence 99999999999987777799999999999999999999 789999999999999999999999999999987654332
Q ss_pred cc--ccccccccccccccccCcCCcCcccchHhHHHHHHHHHh-CCCCCCccccCccchhhhhccchhhhhhhccccccc
Q 002214 820 MK--QTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFT-GMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLS 896 (952)
Q Consensus 820 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 896 (952)
.. .....+++.|+|||++.+..++.++|||||||++|||++ |+.||......+ .. ..+....
T Consensus 492 ~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~--~~-----------~~i~~~~-- 556 (613)
T 2ozo_A 492 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE--VM-----------AFIEQGK-- 556 (613)
T ss_dssp ----------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH--HH-----------HHHHTTC--
T ss_pred eeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--HH-----------HHHHcCC--
Confidence 21 122346789999999998899999999999999999998 999986532211 11 1111110
Q ss_pred hhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHHhhh
Q 002214 897 EDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLLFAN 948 (952)
Q Consensus 897 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~~~~ 948 (952)
....+..+++++.++|.+||+.||++||++.+|++.|+.+.......
T Consensus 557 -----~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~~ 603 (613)
T 2ozo_A 557 -----RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASK 603 (613)
T ss_dssp -----CCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSCS
T ss_pred -----CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhccc
Confidence 01123457889999999999999999999999999999998776543
No 167
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1.7e-38 Score=355.40 Aligned_cols=254 Identities=16% Similarity=0.144 Sum_probs=207.3
Q ss_pred HhccCCccceecCccceEEEEEE------eCCCcEEEEEEeeccCchhhHHHHHHHHHHHhCC---CCccceeeeEeecC
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGR------FPDGIEVAIKVFHLQREGALNSFDAECEILKTIR---HRNLVKIISSCTNH 732 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~ 732 (952)
..++|.+.+.||+|+||+||+|. ..+++.||||+++... ...+.+|++++++++ |+|++++++++...
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~ 139 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence 35679999999999999999994 3468999999986543 356788888888887 99999999999999
Q ss_pred CeeEEEEEccCCCChhHHhhh----cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCC---------
Q 002214 733 NFKALVLEYMPKGSLEDCMYA----SNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDD--------- 799 (952)
Q Consensus 733 ~~~~lv~e~~~~g~L~~~l~~----~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~--------- 799 (952)
+..++||||+++|+|.+++.. ....+++..++.++.|+++||+|| |++||+||||||+|||++.
T Consensus 140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~l---H~~~ivHrDiKp~NIll~~~~~~~~~~~ 216 (365)
T 3e7e_A 140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQV---HDCEIIHGDIKPDNFILGNGFLEQDDED 216 (365)
T ss_dssp SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHH---HTTTEECCCCSGGGEEECGGGTCC----
T ss_pred CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHH---hhCCeecCCCCHHHEEecccccCccccc
Confidence 999999999999999999975 344699999999999999999999 7899999999999999998
Q ss_pred --CCcEEEeccccccccCCc-CcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchh
Q 002214 800 --SMVAHLSDFGIAKLLSEE-DSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIK 876 (952)
Q Consensus 800 --~~~~kl~Dfgla~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~ 876 (952)
++.+||+|||+|+.+... .........||+.|+|||++.+..++.++|||||||++|||+||+.||.....+.....
T Consensus 217 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~ 296 (365)
T 3e7e_A 217 DLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPE 296 (365)
T ss_dssp --CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEEEC
T ss_pred cccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCceeec
Confidence 899999999999765321 22233446799999999999999999999999999999999999999855322211100
Q ss_pred hhhccchhhhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCC-CCHHHHHHHHHHHHHHHh
Q 002214 877 RWINDSLPAVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENR-VNTKEIISRLIKIRDLLF 946 (952)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R-Ps~~ev~~~L~~i~~~~~ 946 (952)
. .. .. ...++.+.+++..|++.+|.+| |+++++.+.|+++.....
T Consensus 297 ~---------------~~-~~---------~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~~ 342 (365)
T 3e7e_A 297 G---------------LF-RR---------LPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQHY 342 (365)
T ss_dssp S---------------CC-TT---------CSSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred h---------------hc-cc---------cCcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHhh
Confidence 0 00 00 0124567889999999999998 578888888888766643
No 168
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=2.2e-37 Score=358.07 Aligned_cols=300 Identities=30% Similarity=0.444 Sum_probs=133.1
Q ss_pred CCccceEEcccCcccccCCccccCCCCCcEEEccCCcccccCCccccccCCccEEEeeCCcCCccCchhhhccCCCcEee
Q 002214 154 LPRLKGLYVSYNQFKGPIPNNLWHCKELSSVSLSYNQFTGRLPRDLGNSTKLKSLDLGFNNLNGEIPQEIGNLRNLEILG 233 (952)
Q Consensus 154 l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 233 (952)
+++|++|++++|++++..+ +..+++|++|++++|++++..+ +..+++|++|++++|.+.+ ++ .+..+++|+.|+
T Consensus 89 l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~ 162 (466)
T 1o6v_A 89 LTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLS 162 (466)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEE
T ss_pred cccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEee
Confidence 3445555555555543222 5555555555555555553322 5555555555555555553 22 355555555555
Q ss_pred eccccccccCCccccCCCCccEEEeeCccccccCCCCcccCCCCCcceEEcccCcCCCCCCcccccchhhhhhhccccCc
Q 002214 234 IDQSNLVGFVPDTIFNISTLKILSLFNNTLSGNLPSSKNLIGLPNLEGLNLGLNNLSGSIPSFFFNASKLYALELGYNSN 313 (952)
Q Consensus 234 L~~n~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l~l~~~~~ 313 (952)
++ |++....+ +.++++|++|++++|.+.+. ..+..+++|++|++++|.+.+..+
T Consensus 163 l~-~~~~~~~~--~~~l~~L~~L~l~~n~l~~~----~~l~~l~~L~~L~l~~n~l~~~~~------------------- 216 (466)
T 1o6v_A 163 FG-NQVTDLKP--LANLTTLERLDISSNKVSDI----SVLAKLTNLESLIATNNQISDITP------------------- 216 (466)
T ss_dssp EE-ESCCCCGG--GTTCTTCCEEECCSSCCCCC----GGGGGCTTCSEEECCSSCCCCCGG-------------------
T ss_pred cC-CcccCchh--hccCCCCCEEECcCCcCCCC----hhhccCCCCCEEEecCCccccccc-------------------
Confidence 54 23332211 44455555555555554421 113344444444444444442211
Q ss_pred cccccccCcceeechhhHHHHHHHhhccccccccCCCcccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCcc
Q 002214 314 LKRLGLERNYLTFSTSELMSLFSALVNCKSLKIGNLINLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQE 393 (952)
Q Consensus 314 L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~ 393 (952)
++.+++|++|++++|++++. ..+..+++|++|++++|.+.+..+
T Consensus 217 --------------------------------~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~-- 260 (466)
T 1o6v_A 217 --------------------------------LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP-- 260 (466)
T ss_dssp --------------------------------GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--
T ss_pred --------------------------------ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--
Confidence 12233444555555554432 234444555555555555443322
Q ss_pred ccCCCcceEEEeccccccccCCCccCCCCCCcEEeccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccc
Q 002214 394 FCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLRILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVV 473 (952)
Q Consensus 394 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 473 (952)
+..+++|+.|++++|++++..+ +..+++|+.|++++|++++..+ +..+++|+.|++++|++++..| +..+++|+
T Consensus 261 ~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~ 334 (466)
T 1o6v_A 261 LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQ 334 (466)
T ss_dssp GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCC
T ss_pred hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCC
Confidence 4444444444444444443222 3444444444444444443322 3444444444444444443322 33444444
Q ss_pred eeecCCcccCCCCcccccCCCCCceEEccCccccCcccccccccccccEEeCCCCccc
Q 002214 474 DIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNKLQGPIPESFGELVSLEFLDLSNNDLS 531 (952)
Q Consensus 474 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 531 (952)
.|++++|++++. ..+..+++|+.|++++|++++..| +..+++|+.|++++|+++
T Consensus 335 ~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~ 388 (466)
T 1o6v_A 335 RLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWT 388 (466)
T ss_dssp EEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEE
T ss_pred EeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCccc
Confidence 444444444432 234444444444444444443333 444444444444444444
No 169
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=8.1e-39 Score=349.25 Aligned_cols=269 Identities=23% Similarity=0.329 Sum_probs=202.0
Q ss_pred HhccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccCc-----hhhHHHHHHHHHHHhCC---CCccceeeeEeecC
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQRE-----GALNSFDAECEILKTIR---HRNLVKIISSCTNH 732 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~ 732 (952)
..++|++.+.||+|+||+||+|++ .+|+.||||++..... .....+.+|+.++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 467899999999999999999997 5789999999864331 12346778888887774 99999999999765
Q ss_pred C-----eeEEEEEccCCCChhHHhhhcCC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEe
Q 002214 733 N-----FKALVLEYMPKGSLEDCMYASNF-NLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLS 806 (952)
Q Consensus 733 ~-----~~~lv~e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~ 806 (952)
. ..++||||++ |+|.+++..... .+++.++..++.|++.||+|| |++||+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~l---H~~~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFL---HANCIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEEcCCCCEEEe
Confidence 4 5789999996 599998876543 489999999999999999999 78999999999999999999999999
Q ss_pred ccccccccCCcCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhcc---ch
Q 002214 807 DFGIAKLLSEEDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWIND---SL 883 (952)
Q Consensus 807 Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~---~~ 883 (952)
|||+|+...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+ ...+.... ..
T Consensus 163 Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~ 239 (308)
T 3g33_A 163 DFGLARIYSYQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD-QLGKIFDLIGLPP 239 (308)
T ss_dssp SCSCTTTSTTCC--CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHH-HHHHHHHHHCCCC
T ss_pred eCccccccCCCc--ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCC
Confidence 999998764332 2234578999999999988899999999999999999999999986532111 11111100 00
Q ss_pred h-hhh---hhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 884 P-AVM---NIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 884 ~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
+ ... .....................+++++.+++.+||+.||++|||+.|++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 240 EDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp TTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 0 000 00000000000000111234567889999999999999999999999875
No 170
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.1e-39 Score=357.85 Aligned_cols=251 Identities=22% Similarity=0.365 Sum_probs=198.3
Q ss_pred hccCCccceecCccceEEEEEEeCCCcEEEEEEeeccC--chhhHHHHHHHHHHHhCCC--CccceeeeEeecCCeeEEE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQR--EGALNSFDAECEILKTIRH--RNLVKIISSCTNHNFKALV 738 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv 738 (952)
.++|++.+.||+|+||.||+|...+++.||||++.... ....+.+.+|+.++++++| |||+++++++..++..++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 45799999999999999999999889999999986543 3345678999999999976 9999999999999999999
Q ss_pred EEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcC
Q 002214 739 LEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEED 818 (952)
Q Consensus 739 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 818 (952)
||+ .+++|.+++.... .+++.++..++.|+++||+|| |++||+||||||+||+++ ++.+||+|||+|+......
T Consensus 88 ~e~-~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~l---H~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~ 161 (343)
T 3dbq_A 88 MEC-GNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTI---HQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 161 (343)
T ss_dssp ECC-CSEEHHHHHHHSC-CCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC----
T ss_pred EeC-CCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCcceEEEE-CCcEEEeecccccccCccc
Confidence 995 5889999997654 689999999999999999999 788999999999999997 6789999999998765433
Q ss_pred cc-cccccccccccccccccCc-----------CCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhh
Q 002214 819 SM-KQTQTLATIGYIAPEYGRE-----------GQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAV 886 (952)
Q Consensus 819 ~~-~~~~~~~~~~y~aPE~~~~-----------~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 886 (952)
.. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......... .
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~-----------~ 230 (343)
T 3dbq_A 162 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK-----------L 230 (343)
T ss_dssp --------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHH-----------H
T ss_pred ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHH-----------H
Confidence 22 2234579999999998754 67889999999999999999999998653221111 1
Q ss_pred hhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 887 MNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 887 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
...++...... .+..++.++.+++.+||+.||++|||+.|++++
T Consensus 231 ~~~~~~~~~~~-------~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 231 HAIIDPNHEIE-------FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp HHHHCTTSCCC-------CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHhcCCcccC-------CcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 11111111111 112335678999999999999999999999876
No 171
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=6.3e-39 Score=356.35 Aligned_cols=260 Identities=23% Similarity=0.332 Sum_probs=203.4
Q ss_pred HHHHHhccCCccceecCccceEEEEEEe-CCCcEEEEEEeecc-----CchhhHHHHHHHHHHHhCCCCccceeeeEeec
Q 002214 658 ELLRATDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQ-----REGALNSFDAECEILKTIRHRNLVKIISSCTN 731 (952)
Q Consensus 658 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 731 (952)
++....++|++.+.||+|+||+||+|.+ .+++.||+|++... .....+.+.+|++++++++||||+++++++.+
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 99 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED 99 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence 3456778999999999999999999987 46889999998643 23445789999999999999999999999999
Q ss_pred CCeeEEEEEccCCCChhHHhhhc---------------------------------------CCCCCHHHHHHHHHHHHH
Q 002214 732 HNFKALVLEYMPKGSLEDCMYAS---------------------------------------NFNLDIFQRLGIMIDVAS 772 (952)
Q Consensus 732 ~~~~~lv~e~~~~g~L~~~l~~~---------------------------------------~~~l~~~~~~~i~~~ia~ 772 (952)
.+..++||||+++|+|.+++... ...+++..+..++.|+++
T Consensus 100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~ 179 (345)
T 3hko_A 100 EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS 179 (345)
T ss_dssp SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence 99999999999999999988521 112356778899999999
Q ss_pred HHHHHHhcCCCCeEeCCCCCCCeeeCCCC--cEEEeccccccccCCcC---cccccccccccccccccccCc--CCcCcc
Q 002214 773 ALEYLHFGHSNPIVHCDIKPSNVLLDDSM--VAHLSDFGIAKLLSEED---SMKQTQTLATIGYIAPEYGRE--GQVSIK 845 (952)
Q Consensus 773 ~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~--~~kl~Dfgla~~~~~~~---~~~~~~~~~~~~y~aPE~~~~--~~~~~~ 845 (952)
||+|| |++||+||||||+||+++.++ .+||+|||+|+.+.... ........||+.|+|||++.+ ..++.+
T Consensus 180 ~l~~L---H~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 256 (345)
T 3hko_A 180 ALHYL---HNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPK 256 (345)
T ss_dssp HHHHH---HHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTH
T ss_pred HHHHH---HHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcH
Confidence 99999 788999999999999998776 89999999998654322 122334679999999998865 678899
Q ss_pred cchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCC
Q 002214 846 GDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESP 925 (952)
Q Consensus 846 ~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP 925 (952)
+|||||||++|||++|+.||......+ .. ............+ ....+++++.+++.+||+.||
T Consensus 257 ~DiwslG~il~el~~g~~pf~~~~~~~-~~-----------~~~~~~~~~~~~~-----~~~~~~~~~~~li~~~l~~~p 319 (345)
T 3hko_A 257 CDAWSAGVLLHLLLMGAVPFPGVNDAD-TI-----------SQVLNKKLCFENP-----NYNVLSPLARDLLSNLLNRNV 319 (345)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCCSSHHH-HH-----------HHHHHCCCCTTSG-----GGGGSCHHHHHHHHHHSCSCT
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCChHH-HH-----------HHHHhcccccCCc-----ccccCCHHHHHHHHHHcCCCh
Confidence 999999999999999999986532111 11 1111111111110 112357789999999999999
Q ss_pred CCCCCHHHHHHH
Q 002214 926 ENRVNTKEIISR 937 (952)
Q Consensus 926 ~~RPs~~ev~~~ 937 (952)
++||++.|++++
T Consensus 320 ~~Rps~~~~l~h 331 (345)
T 3hko_A 320 DERFDAMRALQH 331 (345)
T ss_dssp TTSCCHHHHHHS
T ss_pred hHCCCHHHHhcC
Confidence 999999999874
No 172
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=5.3e-39 Score=345.42 Aligned_cols=248 Identities=24% Similarity=0.393 Sum_probs=202.7
Q ss_pred HhccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccC---chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEE
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQR---EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKAL 737 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 737 (952)
+.++|++.+.||+|+||+||+|.+. +++.||||++.... ......+.+|+.++++++||||+++++++.+.+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 3568999999999999999999874 57899999986432 2234678899999999999999999999999999999
Q ss_pred EEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCc
Q 002214 738 VLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEE 817 (952)
Q Consensus 738 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 817 (952)
||||+++|+|.+++.... .+++..+..++.|++.|++|| |++||+||||||+||+++.++.+||+|||++......
T Consensus 87 v~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~qi~~~l~~L---H~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~ 162 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYC---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 162 (279)
T ss_dssp EECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HTTTCEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred EEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCEecccCChHhEEEcCCCCEEEEeccccccCCcc
Confidence 999999999999887654 689999999999999999999 7899999999999999999999999999998754322
Q ss_pred CcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccch
Q 002214 818 DSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSE 897 (952)
Q Consensus 818 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 897 (952)
......+++.|+|||.+.+..++.++||||||+++|+|++|+.||......+ .... ... ..
T Consensus 163 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~--------~~~-~~------ 223 (279)
T 3fdn_A 163 ---RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-TYKR--------ISR-VE------ 223 (279)
T ss_dssp --------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHH--------HHH-TC------
T ss_pred ---cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHH-HHHH--------HHh-CC------
Confidence 2233568999999999998899999999999999999999999986421110 0000 000 00
Q ss_pred hhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 898 DEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 898 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
...+..+++++.+++.+||+.||++|||+.|++++
T Consensus 224 -----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 224 -----FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp -----CCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred -----CCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00123356789999999999999999999999986
No 173
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=2.6e-37 Score=357.52 Aligned_cols=348 Identities=27% Similarity=0.389 Sum_probs=263.2
Q ss_pred cCCcccCeeeccccccccccCCCcCCcCCCcEEeCcCCcccccCChhhcCCCCCCeEeecCccCccccCccccccccccc
Q 002214 54 GNLSSLQTLVLSRNWFSGTIPKEIGNLTKLKELHLDYNKLQGEIPEELGNLAELEMLVLNNNLLTGTIPASIFNLSFIST 133 (952)
Q Consensus 54 ~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~l~~ 133 (952)
..+++++.|++++|.+. .+|. +..+++|++|+|++|.+.+ +|. ++++++|++|++++|.+++..|
T Consensus 43 ~~l~~l~~L~l~~~~i~-~l~~-~~~l~~L~~L~Ls~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~~~~----------- 107 (466)
T 1o6v_A 43 TDLDQVTTLQADRLGIK-SIDG-VEYLNNLTQINFSNNQLTD-ITP-LKNLTKLVDILMNNNQIADITP----------- 107 (466)
T ss_dssp HHHHTCCEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG-----------
T ss_pred hHhccccEEecCCCCCc-cCcc-hhhhcCCCEEECCCCccCC-chh-hhccccCCEEECCCCccccChh-----------
Confidence 34667778888888777 4553 7777888888888888774 343 7778888888888877762221
Q ss_pred ceeeccccccccCCCCCCCCCCccceEEcccCcccccCCccccCCCCCcEEEccCCcccccCCccccccCCccEEEeeCC
Q 002214 134 ALDFSDNSLTGSFPYDMCPGLPRLKGLYVSYNQFKGPIPNNLWHCKELSSVSLSYNQFTGRLPRDLGNSTKLKSLDLGFN 213 (952)
Q Consensus 134 ~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 213 (952)
+..+++|++|++++|++++.. . +..+++|++|++++|.+++ ++ .++.+++|++|+++ |
T Consensus 108 -----------------~~~l~~L~~L~L~~n~l~~~~-~-~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~ 165 (466)
T 1o6v_A 108 -----------------LANLTNLTGLTLFNNQITDID-P-LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-N 165 (466)
T ss_dssp -----------------GTTCTTCCEEECCSSCCCCCG-G-GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-E
T ss_pred -----------------hcCCCCCCEEECCCCCCCCCh-H-HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-C
Confidence 235667777788777777432 2 7777888888888888774 33 47778888888886 4
Q ss_pred cCCccCchhhhccCCCcEeeeccccccccCCccccCCCCccEEEeeCccccccCCCCcccCCCCCcceEEcccCcCCCCC
Q 002214 214 NLNGEIPQEIGNLRNLEILGIDQSNLVGFVPDTIFNISTLKILSLFNNTLSGNLPSSKNLIGLPNLEGLNLGLNNLSGSI 293 (952)
Q Consensus 214 ~l~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 293 (952)
.+.+.. .+..+++|+.|++++|++... ..+..+++|++|++++|.+.+..+ +..+++|++|++++|++.+.
T Consensus 166 ~~~~~~--~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~----~~~l~~L~~L~l~~n~l~~~- 236 (466)
T 1o6v_A 166 QVTDLK--PLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP----LGILTNLDELSLNGNQLKDI- 236 (466)
T ss_dssp SCCCCG--GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG----GGGCTTCCEEECCSSCCCCC-
T ss_pred cccCch--hhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc----ccccCCCCEEECCCCCcccc-
Confidence 444332 377888888888888877665 347778888888888888875533 55678888888888887642
Q ss_pred CcccccchhhhhhhccccCccccccccCcceeechhhHHHHHHHhhccccccccCCCcccEEEccCCCCCCCCCcccccC
Q 002214 294 PSFFFNASKLYALELGYNSNLKRLGLERNYLTFSTSELMSLFSALVNCKSLKIGNLINLTTLSLGDNNLSGSLPITLGRL 373 (952)
Q Consensus 294 ~~~~~~~~~L~~l~l~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l 373 (952)
+ .+..+++|+.|++++|.+++..+ +..+
T Consensus 237 ~--------------------------------------------------~l~~l~~L~~L~l~~n~l~~~~~--~~~l 264 (466)
T 1o6v_A 237 G--------------------------------------------------TLASLTNLTDLDLANNQISNLAP--LSGL 264 (466)
T ss_dssp G--------------------------------------------------GGGGCTTCSEEECCSSCCCCCGG--GTTC
T ss_pred h--------------------------------------------------hhhcCCCCCEEECCCCccccchh--hhcC
Confidence 1 13456778888888888886544 7788
Q ss_pred CCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCccCCCCCCcEEeccccccCCcCCccccCCCCCceeEe
Q 002214 374 KKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLRILSLSSNELTSVIPSTFWNLEDILGFDF 453 (952)
Q Consensus 374 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 453 (952)
++|++|++++|.+++..+ +..+++|+.|++++|++++..+ +..+++|+.|++++|++++..+ +..+++|+.|++
T Consensus 265 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l 338 (466)
T 1o6v_A 265 TKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFF 338 (466)
T ss_dssp TTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEEC
T ss_pred CCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeEC
Confidence 888888888888876544 7788888888888888886544 7788899999999999987766 778899999999
Q ss_pred cCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEccCccccCc
Q 002214 454 SSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNKLQGP 509 (952)
Q Consensus 454 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 509 (952)
++|++++. ..+..+++|+.|++++|++++..| +..+++|+.|++++|++++.
T Consensus 339 ~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~~ 390 (466)
T 1o6v_A 339 YNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNA 390 (466)
T ss_dssp CSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEECC
T ss_pred CCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccCC
Confidence 99998864 478889999999999999997766 88899999999999999863
No 174
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1e-38 Score=360.08 Aligned_cols=270 Identities=23% Similarity=0.304 Sum_probs=195.1
Q ss_pred HHhccCCccceecCccceEEEEEEe-CCCcEEEEEEeecc--CchhhHHHHHHHHHHHhCC-CCccceeeeEeecCC--e
Q 002214 661 RATDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQ--REGALNSFDAECEILKTIR-HRNLVKIISSCTNHN--F 734 (952)
Q Consensus 661 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~--~ 734 (952)
...++|++.+.||+|+||.||+|.+ .+|+.||||++... .....+.+.+|+.+++++. ||||+++++++..++ .
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 3567899999999999999999987 46999999998543 3344567889999999997 999999999997543 6
Q ss_pred eEEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEecccccccc
Q 002214 735 KALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLL 814 (952)
Q Consensus 735 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~ 814 (952)
.|+||||++ |+|.+++... .+++..+..++.|+++||+|| |++||+||||||+||+++.++.+||+|||+|+..
T Consensus 86 ~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~L---H~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 159 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYL---HSGGLLHRDMKPSNILLNAECHVKVADFGLSRSF 159 (388)
T ss_dssp EEEEEECCS-EEHHHHHHHT--CCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTCCEEECCCTTCEES
T ss_pred EEEEecccC-cCHHHHHHcC--CCCHHHHHHHHHHHHHHHHHH---HhCCEEeCCCCHHHeEEcCCCCEEecCCcccccc
Confidence 899999997 5899888764 589999999999999999999 7899999999999999999999999999999865
Q ss_pred CCcC--------------------cccccccccccccccccccCc-CCcCcccchHhHHHHHHHHHhCCCCCCccccCcc
Q 002214 815 SEED--------------------SMKQTQTLATIGYIAPEYGRE-GQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEM 873 (952)
Q Consensus 815 ~~~~--------------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~ 873 (952)
.... .......+||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... .
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~ 238 (388)
T 3oz6_A 160 VNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTM-N 238 (388)
T ss_dssp SSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-H
T ss_pred cccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHH-H
Confidence 3211 111233579999999998876 67899999999999999999999998653211 1
Q ss_pred chhhhhc---cchhhhhhhcc-------------------ccccchhhHHHH-----HhhhhhHHHHHHHHhhccccCCC
Q 002214 874 SIKRWIN---DSLPAVMNIMD-------------------TNLLSEDEEHAN-----VAKQSCASSVLSLAMECTSESPE 926 (952)
Q Consensus 874 ~~~~~~~---~~~~~~~~~~~-------------------~~~~~~~~~~~~-----~~~~~~~~~l~~li~~cl~~dP~ 926 (952)
.+..... ...++....+. ............ ..+..+++++.+++.+||..||+
T Consensus 239 ~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~ 318 (388)
T 3oz6_A 239 QLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPN 318 (388)
T ss_dssp HHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGG
T ss_pred HHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcc
Confidence 1111110 00000000000 000000000000 01125678899999999999999
Q ss_pred CCCCHHHHHHH
Q 002214 927 NRVNTKEIISR 937 (952)
Q Consensus 927 ~RPs~~ev~~~ 937 (952)
+|||+.|+++|
T Consensus 319 ~R~t~~e~l~H 329 (388)
T 3oz6_A 319 KRISANDALKH 329 (388)
T ss_dssp GSCCHHHHTTS
T ss_pred cCCCHHHHhCC
Confidence 99999999876
No 175
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=5.7e-39 Score=355.37 Aligned_cols=246 Identities=25% Similarity=0.362 Sum_probs=202.1
Q ss_pred ccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccC---chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEE
Q 002214 664 DQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQR---EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVL 739 (952)
Q Consensus 664 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 739 (952)
+.|...+.||+|+||+||+|+. .+|+.||||++.... ....+.+.+|++++++++||||+++++++..++..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 4688999999999999999987 579999999986543 223467889999999999999999999999999999999
Q ss_pred EccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcCc
Q 002214 740 EYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEEDS 819 (952)
Q Consensus 740 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 819 (952)
||++ |++.+.+......+++..+..++.|+++||+|| |++||+||||||+||+++.++.+||+|||+++.....
T Consensus 134 e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~-- 207 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYL---HSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-- 207 (348)
T ss_dssp ECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB--
T ss_pred ecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH---HhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC--
Confidence 9997 688888876666899999999999999999999 7889999999999999999999999999999865432
Q ss_pred ccccccccccccccccccC---cCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccc
Q 002214 820 MKQTQTLATIGYIAPEYGR---EGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLS 896 (952)
Q Consensus 820 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 896 (952)
....||+.|+|||++. .+.++.++|||||||++|||++|+.||....... ......... .+..
T Consensus 208 ---~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~-~~~~~~~~~--------~~~~-- 273 (348)
T 1u5q_A 208 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQNE--------SPAL-- 273 (348)
T ss_dssp ---CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHSC--------CCCC--
T ss_pred ---CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHhcC--------CCCC--
Confidence 2356999999999873 5678999999999999999999999985421110 000000000 0000
Q ss_pred hhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 897 EDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 897 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
.+..+++.+.+++.+||+.||++|||+.|++++
T Consensus 274 --------~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 274 --------QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp --------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred --------CCCCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 112356779999999999999999999999865
No 176
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=7.1e-39 Score=351.64 Aligned_cols=250 Identities=22% Similarity=0.298 Sum_probs=181.4
Q ss_pred cceecCccceEEEEEEeC-CCcEEEEEEeeccCchhhHHHHHHHHHHHhCC-CCccceeeeEeecCCeeEEEEEccCCCC
Q 002214 669 ENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQREGALNSFDAECEILKTIR-HRNLVKIISSCTNHNFKALVLEYMPKGS 746 (952)
Q Consensus 669 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~g~ 746 (952)
.+.||+|+||+||+|.+. +|+.||||++... ....+.+|+.++++++ ||||+++++++.+++..++||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 478999999999999984 6899999998643 2356789999999997 9999999999999999999999999999
Q ss_pred hhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCC---cEEEeccccccccCCcCccccc
Q 002214 747 LEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSM---VAHLSDFGIAKLLSEEDSMKQT 823 (952)
Q Consensus 747 L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~---~~kl~Dfgla~~~~~~~~~~~~ 823 (952)
|.+++.... .+++.++..++.|++.||+|| |++||+||||||+||+++.++ .+||+|||+++...... ....
T Consensus 93 L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~L---H~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~ 167 (325)
T 3kn6_A 93 LFERIKKKK-HFSETEASYIMRKLVSAVSHM---HDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN-QPLK 167 (325)
T ss_dssp HHHHHHHCS-CCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-------
T ss_pred HHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC-Cccc
Confidence 999997654 699999999999999999999 789999999999999997665 89999999998664332 2233
Q ss_pred ccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhh-hhccccccchhhHHH
Q 002214 824 QTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVM-NIMDTNLLSEDEEHA 902 (952)
Q Consensus 824 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 902 (952)
...+|+.|+|||++.+..++.++|||||||++|||++|+.||......... ....+.. .+.........
T Consensus 168 ~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~------~~~~~~~~~i~~~~~~~~~---- 237 (325)
T 3kn6_A 168 TPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTC------TSAVEIMKKIKKGDFSFEG---- 237 (325)
T ss_dssp ----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------C------CCHHHHHHHHTTTCCCCCS----
T ss_pred ccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCcccccc------ccHHHHHHHHHcCCCCCCc----
Confidence 456899999999999999999999999999999999999999753221100 0000111 11111111010
Q ss_pred HHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 903 NVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 903 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
..+..+++++.+++.+||+.||++|||+.|++++
T Consensus 238 -~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 238 -EAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp -HHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred -ccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 1123467889999999999999999999988743
No 177
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=4.3e-39 Score=345.35 Aligned_cols=246 Identities=21% Similarity=0.354 Sum_probs=181.9
Q ss_pred ccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccC---chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEE
Q 002214 664 DQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQR---EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVL 739 (952)
Q Consensus 664 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 739 (952)
++|++.+.||+|+||.||+|++ .+|+.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 5799999999999999999987 468999999986542 233567889999999999999999999999999999999
Q ss_pred EccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcCc
Q 002214 740 EYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEEDS 819 (952)
Q Consensus 740 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 819 (952)
||+ ++++.+.+.... .+++.++..++.|++.|++|| |++||+||||||+||+++.++.+||+|||++........
T Consensus 93 e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~L---H~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 167 (275)
T 2eue_A 93 EYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYC---HRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp ECC-CEEHHHHHHTSS-SCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCSGGGEEECTTSCEEECCSSCC--------
T ss_pred hhc-CCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCCeeccCChHhEEECCCCCEEEeecccceeccCccc
Confidence 999 678888776543 699999999999999999999 789999999999999999999999999999986644322
Q ss_pred ccccccccccccccccccCcCCc-CcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccchh
Q 002214 820 MKQTQTLATIGYIAPEYGREGQV-SIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSED 898 (952)
Q Consensus 820 ~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 898 (952)
.....||+.|+|||.+.+..+ +.++||||+|+++|||++|+.||..... .... ..+....
T Consensus 168 --~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~--------~~~~~~~---- 228 (275)
T 2eue_A 168 --LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI-----PVLF--------KNISNGV---- 228 (275)
T ss_dssp ---------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHH--------HHHHHTC----
T ss_pred --ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCH-----HHHH--------HHHHhCC----
Confidence 233568999999999887665 7899999999999999999999865211 0000 0000000
Q ss_pred hHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 899 EEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 899 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
...+..+++++.+++.+||+.||++|||+.|++++
T Consensus 229 ----~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 229 ----YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp ----CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred ----CCCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 01123457789999999999999999999999864
No 178
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.5e-38 Score=341.37 Aligned_cols=254 Identities=25% Similarity=0.362 Sum_probs=208.0
Q ss_pred HhccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccC-chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEE
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQR-EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVL 739 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 739 (952)
..++|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.++++++||||+++++++.+++..++||
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence 3568999999999999999999985 68999999986543 334577899999999999999999999999999999999
Q ss_pred EccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcCc
Q 002214 740 EYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEEDS 819 (952)
Q Consensus 740 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 819 (952)
||+++++|.+++... ..+++..+..++.|+++||+|| |++||+||||||+||+++.++.+||+|||.+........
T Consensus 85 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 160 (276)
T 2yex_A 85 EYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYL---HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160 (276)
T ss_dssp ECCTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred EecCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHH---HhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcc
Confidence 999999999988654 3689999999999999999999 789999999999999999999999999999986543221
Q ss_pred -ccccccccccccccccccCcCCc-CcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccch
Q 002214 820 -MKQTQTLATIGYIAPEYGREGQV-SIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSE 897 (952)
Q Consensus 820 -~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 897 (952)
.......|++.|+|||.+.+..+ +.++||||||+++|||++|+.||.........+..+..... ..
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~----------~~-- 228 (276)
T 2yex_A 161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT----------YL-- 228 (276)
T ss_dssp ECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCT----------TS--
T ss_pred hhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhccc----------cc--
Confidence 11234568999999999887665 78899999999999999999999764333222222221100 00
Q ss_pred hhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 898 DEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 898 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
.....+++++.+++.+||+.||++|||+.|++++
T Consensus 229 ------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 229 ------NPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp ------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ------CchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 0113456789999999999999999999999864
No 179
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=2.2e-39 Score=379.58 Aligned_cols=258 Identities=26% Similarity=0.455 Sum_probs=212.8
Q ss_pred HHhccCCccceecCccceEEEEEEeCCCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEEE
Q 002214 661 RATDQFSEENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVLE 740 (952)
Q Consensus 661 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 740 (952)
...++|++.+.||+|+||.||+|.+.++..||||+++.... ..+.|.+|++++++++||||+++++++.+ +..++|||
T Consensus 264 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e 341 (535)
T 2h8h_A 264 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 341 (535)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred cchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeee
Confidence 34567999999999999999999998888999999975443 34679999999999999999999999876 67899999
Q ss_pred ccCCCChhHHhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcCc
Q 002214 741 YMPKGSLEDCMYAS-NFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEEDS 819 (952)
Q Consensus 741 ~~~~g~L~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 819 (952)
|+++|+|.+++... ...+++.+++.++.||++||+|| |+++|+||||||+|||+++++.+||+|||+++.......
T Consensus 342 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~L---H~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 418 (535)
T 2h8h_A 342 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV---ERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 418 (535)
T ss_dssp CCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHH
T ss_pred hhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCce
Confidence 99999999999753 23589999999999999999999 789999999999999999999999999999987654332
Q ss_pred ccccccccccccccccccCcCCcCcccchHhHHHHHHHHHh-CCCCCCccccCccchhhhhccchhhhhhhccccccchh
Q 002214 820 MKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFT-GMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSED 898 (952)
Q Consensus 820 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 898 (952)
.......++..|+|||++....++.++|||||||++|||++ |+.||......+ ....+.....
T Consensus 419 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~-------------~~~~i~~~~~--- 482 (535)
T 2h8h_A 419 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-------------VLDQVERGYR--- 482 (535)
T ss_dssp HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHH-------------HHHHHHTTCC---
T ss_pred ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-------------HHHHHHcCCC---
Confidence 23333457889999999988899999999999999999999 899986532111 0011111100
Q ss_pred hHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHH
Q 002214 899 EEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRD 943 (952)
Q Consensus 899 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~ 943 (952)
...+..++.++.++|.+||+.||++|||+.+|++.|+++..
T Consensus 483 ----~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~ 523 (535)
T 2h8h_A 483 ----MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 523 (535)
T ss_dssp ----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred ----CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence 01134567889999999999999999999999999987644
No 180
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=9.9e-39 Score=345.51 Aligned_cols=260 Identities=23% Similarity=0.371 Sum_probs=209.4
Q ss_pred HhccCCccc-eecCccceEEEEEEe---CCCcEEEEEEeeccC--chhhHHHHHHHHHHHhCCCCccceeeeEeecCCee
Q 002214 662 ATDQFSEEN-LIGIGSYGSVYKGRF---PDGIEVAIKVFHLQR--EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFK 735 (952)
Q Consensus 662 ~~~~~~~~~-~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 735 (952)
..++|.+.+ .||+|+||+||+|.+ .+++.||||+++... ....+.+.+|++++++++||||+++++++ ..+..
T Consensus 14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~ 92 (291)
T 1xbb_A 14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESW 92 (291)
T ss_dssp CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSE
T ss_pred cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCc
Confidence 456788888 999999999999964 347899999986543 23357799999999999999999999999 55678
Q ss_pred EEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccC
Q 002214 736 ALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLS 815 (952)
Q Consensus 736 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~ 815 (952)
++||||+++++|.+++.... .+++..++.++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++...
T Consensus 93 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~L---H~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 168 (291)
T 1xbb_A 93 MLVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYL---EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR 168 (291)
T ss_dssp EEEEECCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEEeCCCCCHHHHHHhCc-CCCHHHHHHHHHHHHHHHHHH---HhCCeEcCCCCcceEEEeCCCcEEEccCCcceeec
Confidence 99999999999999997654 689999999999999999999 78899999999999999999999999999998765
Q ss_pred CcCccc--ccccccccccccccccCcCCcCcccchHhHHHHHHHHHh-CCCCCCccccCccchhhhhccchhhhhhhccc
Q 002214 816 EEDSMK--QTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFT-GMKPTNEFFTGEMSIKRWINDSLPAVMNIMDT 892 (952)
Q Consensus 816 ~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 892 (952)
...... .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... .... .+..
T Consensus 169 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~-----------~~~~ 235 (291)
T 1xbb_A 169 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EVTA-----------MLEK 235 (291)
T ss_dssp TTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHH-----------HHHT
T ss_pred cCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHHH-----------HHHc
Confidence 443321 122346789999999988889999999999999999999 99998653211 1111 0100
Q ss_pred cccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHHh
Q 002214 893 NLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLLF 946 (952)
Q Consensus 893 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~~ 946 (952)
... ...+..+++++.+++.+||+.||++||++.|+++.|+++.....
T Consensus 236 ~~~-------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 282 (291)
T 1xbb_A 236 GER-------MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV 282 (291)
T ss_dssp TCC-------CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHH
T ss_pred CCC-------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHh
Confidence 000 00123467889999999999999999999999999999987754
No 181
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.1e-38 Score=344.12 Aligned_cols=252 Identities=21% Similarity=0.347 Sum_probs=205.8
Q ss_pred hccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccC--chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQR--EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVL 739 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 739 (952)
.++|++.+.||+|+||.||+|.+. +|+.||+|++.... ....+.+.+|+.++++++||||+++++++..++..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 568999999999999999999874 68999999986543 334567889999999999999999999999999999999
Q ss_pred EccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCc---EEEeccccccccCC
Q 002214 740 EYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMV---AHLSDFGIAKLLSE 816 (952)
Q Consensus 740 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~---~kl~Dfgla~~~~~ 816 (952)
||+++++|.+.+.... .+++..+..++.|++.|++|| |++||+||||||+||+++.++. +||+|||++.....
T Consensus 85 e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 85 DLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYC---HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp CCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred ecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 9999999988887654 689999999999999999999 7899999999999999986655 99999999987654
Q ss_pred cCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccc
Q 002214 817 EDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLS 896 (952)
Q Consensus 817 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 896 (952)
... .....||+.|+|||.+.+..++.++||||+|+++|+|++|+.||....... ..... .......
T Consensus 161 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~-----------~~~~~~~ 226 (284)
T 3kk8_A 161 SEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR-LYAQI-----------KAGAYDY 226 (284)
T ss_dssp SCB--CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHH-----------HHTCCCC
T ss_pred Ccc--ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhH-HHHHH-----------HhccccC
Confidence 332 233569999999999999999999999999999999999999985521110 00000 0000000
Q ss_pred hhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 897 EDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 897 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
.. .....+++++.+++.+||+.||++|||+.|++++
T Consensus 227 ~~-----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 227 PS-----PEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp CT-----TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred Cc-----hhhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 00 0113456789999999999999999999999875
No 182
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1.7e-38 Score=355.29 Aligned_cols=276 Identities=20% Similarity=0.261 Sum_probs=204.6
Q ss_pred CHHHHHHHhccCCccceecCccceEEEEEEeCCCcEEEEEEeeccCc-----------hhhHHHHHHHHHHHhCCCCccc
Q 002214 655 SHDELLRATDQFSEENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQRE-----------GALNSFDAECEILKTIRHRNLV 723 (952)
Q Consensus 655 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~E~~~l~~l~h~niv 723 (952)
...++....++|.+.+.||+|+||.||+|.+.+|+.||||++..... ...+.+.+|++++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 35677788899999999999999999999998899999999854321 1236789999999999999999
Q ss_pred eeeeEeec-----CCeeEEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeC
Q 002214 724 KIISSCTN-----HNFKALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLD 798 (952)
Q Consensus 724 ~l~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~ 798 (952)
++++++.. ....++||||++ |+|.+.+......+++..+..++.|++.||+|| |++||+||||||+||+++
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dlkp~NIl~~ 168 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVL---HEAGVVHRDLHPGNILLA 168 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEEC
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HHCcCEecCCChHHEEEc
Confidence 99999843 346799999997 688888877766899999999999999999999 788999999999999999
Q ss_pred CCCcEEEeccccccccCCcCcccccccccccccccccccCc-CCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhh
Q 002214 799 DSMVAHLSDFGIAKLLSEEDSMKQTQTLATIGYIAPEYGRE-GQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKR 877 (952)
Q Consensus 799 ~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~ 877 (952)
.++.+||+|||+++...... ......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||......+ ....
T Consensus 169 ~~~~~kl~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~ 245 (362)
T 3pg1_A 169 DNNDITICDFNLAREDTADA--NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYN-QLNK 245 (362)
T ss_dssp TTCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHH
T ss_pred CCCCEEEEecCccccccccc--ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHH-HHHH
Confidence 99999999999998543322 2334568999999998876 678999999999999999999999986532111 1111
Q ss_pred hhc---c---------chhhhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 878 WIN---D---------SLPAVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 878 ~~~---~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
... . ..+...+.+..................+++.+.+++.+||+.||++|||+.|++++
T Consensus 246 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 246 IVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 100 0 00001111111111111111112234557789999999999999999999999874
No 183
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=7.8e-39 Score=360.15 Aligned_cols=250 Identities=21% Similarity=0.363 Sum_probs=198.7
Q ss_pred ccCCccceecCccceEEEEEEeCCCcEEEEEEeeccC--chhhHHHHHHHHHHHhCC--CCccceeeeEeecCCeeEEEE
Q 002214 664 DQFSEENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQR--EGALNSFDAECEILKTIR--HRNLVKIISSCTNHNFKALVL 739 (952)
Q Consensus 664 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lv~ 739 (952)
.+|++.+.||+|+||.||+|...+++.||||++.... ....+.+.+|+.++++++ ||||+++++++..++..|+||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 4699999999999999999999889999999986543 334577899999999996 599999999999999999999
Q ss_pred EccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcCc
Q 002214 740 EYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEEDS 819 (952)
Q Consensus 740 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 819 (952)
| +.+++|.+++.... .+++.++..++.||+.||+|| |++||+||||||+|||++ ++.+||+|||+|+.+.....
T Consensus 136 E-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~l---H~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~ 209 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTI---HQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 209 (390)
T ss_dssp E-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHH---HTTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-----
T ss_pred e-cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCc
Confidence 9 56889999987654 789999999999999999999 789999999999999995 58999999999987654322
Q ss_pred c-cccccccccccccccccCc-----------CCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhh
Q 002214 820 M-KQTQTLATIGYIAPEYGRE-----------GQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVM 887 (952)
Q Consensus 820 ~-~~~~~~~~~~y~aPE~~~~-----------~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 887 (952)
. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......... ..
T Consensus 210 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~-----------~~ 278 (390)
T 2zmd_A 210 SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK-----------LH 278 (390)
T ss_dssp ----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHH-----------HH
T ss_pred cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHH-----------HH
Confidence 1 2234579999999998764 46889999999999999999999999653211111 11
Q ss_pred hhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 888 NIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 888 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
.+++...... .+..++.++.+++.+||+.||++|||+.|++++
T Consensus 279 ~~~~~~~~~~-------~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 279 AIIDPNHEIE-------FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp HHHCTTSCCC-------CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHhCccccCC-------CCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 1122111111 112235678999999999999999999999875
No 184
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.5e-38 Score=361.55 Aligned_cols=254 Identities=24% Similarity=0.314 Sum_probs=195.2
Q ss_pred HHhccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccC--------chhhHHHHHHHHHHHhCCCCccceeeeEeec
Q 002214 661 RATDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQR--------EGALNSFDAECEILKTIRHRNLVKIISSCTN 731 (952)
Q Consensus 661 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 731 (952)
...++|.+.+.||+|+||+||+|.+ .+++.||||++.... ......+.+|+.++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 3567899999999999999999987 468999999986532 1122357899999999999999999999865
Q ss_pred CCeeEEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCC---cEEEecc
Q 002214 732 HNFKALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSM---VAHLSDF 808 (952)
Q Consensus 732 ~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~---~~kl~Df 808 (952)
+..++||||+++|+|.+++.... .+++.++..++.|++.||+|| |++||+||||||+||+++.++ .+||+||
T Consensus 212 -~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~L---H~~~ivHrDlkp~NIll~~~~~~~~~kl~DF 286 (419)
T 3i6u_A 212 -EDYYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYL---HENGIIHRDLKPENVLLSSQEEDCLIKITDF 286 (419)
T ss_dssp -SEEEEEEECCTTCBGGGGTSSSC-CCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEESSSSSSCCEEECCS
T ss_pred -CceEEEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHH---HHCCccccCCChHhEEEecCCCcceEEEeec
Confidence 45799999999999999886544 699999999999999999999 688999999999999997544 5999999
Q ss_pred ccccccCCcCcccccccccccccccccccC---cCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhh
Q 002214 809 GIAKLLSEEDSMKQTQTLATIGYIAPEYGR---EGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPA 885 (952)
Q Consensus 809 gla~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 885 (952)
|+|+...... ......||+.|+|||++. ...++.++|||||||++|||++|+.||.................
T Consensus 287 G~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~--- 361 (419)
T 3i6u_A 287 GHSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGK--- 361 (419)
T ss_dssp STTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTC---
T ss_pred ccceecCCCc--cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCC---
Confidence 9998764332 223457999999999875 35678899999999999999999999975322221111111100
Q ss_pred hhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 886 VMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 886 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
.... ......+++++.+++.+||+.||++|||++|++++
T Consensus 362 ---------~~~~----~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 362 ---------YNFI----PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp ---------CCCC----HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ---------CCCC----chhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 0000 11123457789999999999999999999999875
No 185
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1.4e-38 Score=365.46 Aligned_cols=265 Identities=20% Similarity=0.218 Sum_probs=196.1
Q ss_pred hccCCccceecCccceEEEEEEe-CCCcEEEEEEeecc--CchhhHHHHHHHHHHHhCCCCccceeeeEeecC------C
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQ--REGALNSFDAECEILKTIRHRNLVKIISSCTNH------N 733 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 733 (952)
.++|++.+.||+|+||+||+|++ .+|+.||||++... .....+++.+|+.+++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 56899999999999999999987 46899999998654 334456788999999999999999999999654 3
Q ss_pred eeEEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccc
Q 002214 734 FKALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKL 813 (952)
Q Consensus 734 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~ 813 (952)
..|+||||++++ +.+.+.. .+++..+..++.|+++||+|| |++||+||||||+|||++.++.+||+|||+|+.
T Consensus 141 ~~~lv~E~~~~~-l~~~~~~---~l~~~~~~~~~~qil~aL~~l---H~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~ 213 (464)
T 3ttj_A 141 DVYLVMELMDAN-LCQVIQM---ELDHERMSYLLYQMLCGIKHL---HSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 213 (464)
T ss_dssp EEEEEEECCSEE-HHHHHTS---CCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred eEEEEEeCCCCC-HHHHHhh---cCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence 579999999764 6555543 489999999999999999999 788999999999999999999999999999987
Q ss_pred cCCcCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhh---ccchhh-----
Q 002214 814 LSEEDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWI---NDSLPA----- 885 (952)
Q Consensus 814 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~---~~~~~~----- 885 (952)
.... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||...... ..+.... ....++
T Consensus 214 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~-~~~~~i~~~lg~p~~~~~~~~ 290 (464)
T 3ttj_A 214 AGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI-DQWNKVIEQLGTPCPEFMKKL 290 (464)
T ss_dssp ---C--CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCSCCHHHHTTS
T ss_pred cCCC--cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCCHHHHHHc
Confidence 6432 2234467999999999999999999999999999999999999999653211 1111111 011111
Q ss_pred ---hhhhccccccchhhHHH-----------HHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 886 ---VMNIMDTNLLSEDEEHA-----------NVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 886 ---~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
....+............ .......++++.+|+.+||..||++|||++|+++|
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 291 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp CHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred chhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 11111100000000000 00112236789999999999999999999999875
No 186
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=6.3e-39 Score=344.60 Aligned_cols=252 Identities=29% Similarity=0.437 Sum_probs=201.2
Q ss_pred hccCCccceecCccceEEEEEEeCCCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEeecC-CeeEEEEEc
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSCTNH-NFKALVLEY 741 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~lv~e~ 741 (952)
.++|++.+.||+|+||.||+|+. +|+.||||+++... ..+.+.+|++++++++||||+++++++.+. +..++||||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 56899999999999999999988 58999999986543 347789999999999999999999987554 578999999
Q ss_pred cCCCChhHHhhhcCC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcCcc
Q 002214 742 MPKGSLEDCMYASNF-NLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEEDSM 820 (952)
Q Consensus 742 ~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 820 (952)
+++++|.+++..... .+++..+..++.|+++|++|| |++||+||||||+||+++.++.+||+|||++.......
T Consensus 97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-- 171 (278)
T 1byg_A 97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL---EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 171 (278)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHH---HhCCccccCCCcceEEEeCCCcEEEeeccccccccccc--
Confidence 999999999876432 378999999999999999999 78999999999999999999999999999998654322
Q ss_pred cccccccccccccccccCcCCcCcccchHhHHHHHHHHHh-CCCCCCccccCccchhhhhccchhhhhhhccccccchhh
Q 002214 821 KQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFT-GMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSEDE 899 (952)
Q Consensus 821 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 899 (952)
....+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+ ... . +.....
T Consensus 172 --~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~--~~~-------~----~~~~~~---- 232 (278)
T 1byg_A 172 --DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVP-------R----VEKGYK---- 232 (278)
T ss_dssp ------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG--HHH-------H----HTTTCC----
T ss_pred --cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH--HHH-------H----HhcCCC----
Confidence 22357889999999988889999999999999999998 999986532111 100 0 000000
Q ss_pred HHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 002214 900 EHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDL 944 (952)
Q Consensus 900 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~ 944 (952)
...+..+++++.+++.+||+.||++||++.|+++.|++++..
T Consensus 233 ---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 233 ---MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp ---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---CCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence 011234677899999999999999999999999999998764
No 187
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.6e-38 Score=349.98 Aligned_cols=260 Identities=25% Similarity=0.440 Sum_probs=208.0
Q ss_pred hccCCccceecCccceEEEEEEeC-CCcE--EEEEEeecc-CchhhHHHHHHHHHHHhC-CCCccceeeeEeecCCeeEE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP-DGIE--VAIKVFHLQ-REGALNSFDAECEILKTI-RHRNLVKIISSCTNHNFKAL 737 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~--vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 737 (952)
.++|.+.+.||+|+||.||+|++. +|.. ||+|.++.. .....+.+.+|+++++++ +||||+++++++.+.+..++
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence 357999999999999999999874 5664 499988643 233456789999999999 89999999999999999999
Q ss_pred EEEccCCCChhHHhhhcC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCc
Q 002214 738 VLEYMPKGSLEDCMYASN---------------FNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMV 802 (952)
Q Consensus 738 v~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~ 802 (952)
||||+++|+|.+++.... ..+++..++.++.|+++||+|| |++||+||||||+||+++.++.
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYV 180 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECGGGC
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHH---HhCCccCCCCccceEEEcCCCe
Confidence 999999999999987643 3689999999999999999999 7899999999999999999999
Q ss_pred EEEeccccccccCCcCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHh-CCCCCCccccCccchhhhhcc
Q 002214 803 AHLSDFGIAKLLSEEDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFT-GMKPTNEFFTGEMSIKRWIND 881 (952)
Q Consensus 803 ~kl~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~ 881 (952)
+||+|||+++..... .......+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... .
T Consensus 181 ~kL~Dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~-----~---- 249 (327)
T 1fvr_A 181 AKIADFGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-----E---- 249 (327)
T ss_dssp EEECCTTCEESSCEE--CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----H----
T ss_pred EEEcccCcCcccccc--ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH-----H----
Confidence 999999999754321 12223457889999999988889999999999999999998 99998653211 0
Q ss_pred chhhhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHHhh
Q 002214 882 SLPAVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLLFA 947 (952)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~~~ 947 (952)
....+...... ..+..+++++.+++.+||+.||++|||+.|++++|+++.+....
T Consensus 250 ----~~~~~~~~~~~-------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 304 (327)
T 1fvr_A 250 ----LYEKLPQGYRL-------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKT 304 (327)
T ss_dssp ----HHHHGGGTCCC-------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSSC
T ss_pred ----HHHHhhcCCCC-------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhcC
Confidence 00111111000 01234577899999999999999999999999999998876543
No 188
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.6e-38 Score=345.84 Aligned_cols=269 Identities=24% Similarity=0.339 Sum_probs=201.3
Q ss_pred ccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccCc--hhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEEE
Q 002214 664 DQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQRE--GALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVLE 740 (952)
Q Consensus 664 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 740 (952)
++|++.+.||+|+||+||+|++. +|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 57999999999999999999984 599999998854432 234678899999999999999999999999999999999
Q ss_pred ccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcCcc
Q 002214 741 YMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEEDSM 820 (952)
Q Consensus 741 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 820 (952)
|+++++|.+++... ..+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++.......
T Consensus 83 ~~~~~~l~~~~~~~-~~~~~~~~~~i~~~l~~~l~~l---H~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 157 (311)
T 4agu_A 83 YCDHTVLHELDRYQ-RGVPEHLVKSITWQTLQAVNFC---HKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD- 157 (311)
T ss_dssp CCSEEHHHHHHHTS-SCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred eCCCchHHHHHhhh-cCCCHHHHHHHHHHHHHHHHHH---HHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc-
Confidence 99999998877654 3689999999999999999999 789999999999999999999999999999987653322
Q ss_pred cccccccccccccccccCc-CCcCcccchHhHHHHHHHHHhCCCCCCccccCccc--hhhhhccchhhhhhhcc------
Q 002214 821 KQTQTLATIGYIAPEYGRE-GQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMS--IKRWINDSLPAVMNIMD------ 891 (952)
Q Consensus 821 ~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~------ 891 (952)
......+|+.|+|||++.+ ..++.++||||+|+++|||++|+.||......+.. .........+.....+.
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (311)
T 4agu_A 158 YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFS 237 (311)
T ss_dssp --------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGT
T ss_pred ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccc
Confidence 2234568999999998865 56899999999999999999999998653221110 01111111111000000
Q ss_pred ccccch--hhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 892 TNLLSE--DEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 892 ~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
...... ...........++.++.+++.+||+.||++|||+.|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 238 GVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp TCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 000000 0000011123467789999999999999999999999865
No 189
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.8e-38 Score=367.74 Aligned_cols=253 Identities=23% Similarity=0.340 Sum_probs=207.7
Q ss_pred hccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccC---chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQR---EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALV 738 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 738 (952)
.++|++.+.||+|+||.||+|+.. +|+.||||++.... ......+.+|++++++++||||+++++++.+.+..|+|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 467999999999999999999884 79999999986532 23346688999999999999999999999999999999
Q ss_pred EEccCCCChhHHhhhcC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCc
Q 002214 739 LEYMPKGSLEDCMYASN-FNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEE 817 (952)
Q Consensus 739 ~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 817 (952)
|||+++|+|.+++.... ..+++..+..++.||+.||+|| |++||+||||||+||+++.++.+||+|||+|+.....
T Consensus 263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yL---H~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~ 339 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDL---HRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339 (576)
T ss_dssp ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---HHCCEeccCCchheEEEeCCCCeEEEecccceecccC
Confidence 99999999999887644 3599999999999999999999 7889999999999999999999999999999876543
Q ss_pred CcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccch
Q 002214 818 DSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSE 897 (952)
Q Consensus 818 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 897 (952)
.. ....+||+.|+|||++.+..++.++|||||||++|||++|+.||........ ... ....+....
T Consensus 340 ~~--~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~-~~~--------i~~~i~~~~--- 405 (576)
T 2acx_A 340 QT--IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK-REE--------VERLVKEVP--- 405 (576)
T ss_dssp CC--EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCC-HHH--------HHHHHHHCC---
T ss_pred cc--ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchh-HHH--------HHHHhhccc---
Confidence 22 2335799999999999998999999999999999999999999975322110 000 000000000
Q ss_pred hhHHHHHhhhhhHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 002214 898 DEEHANVAKQSCASSVLSLAMECTSESPENRV-----NTKEIISR 937 (952)
Q Consensus 898 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~ev~~~ 937 (952)
...+..+++++.+++.+||..||++|| ++.||++|
T Consensus 406 -----~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 406 -----EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp -----CCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred -----ccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 001234577899999999999999999 78888765
No 190
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.3e-39 Score=361.41 Aligned_cols=277 Identities=22% Similarity=0.305 Sum_probs=212.0
Q ss_pred hccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccC-chhhHHHHHHHHHHHhCCCCccceeeeEeecCC--eeEEE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQR-EGALNSFDAECEILKTIRHRNLVKIISSCTNHN--FKALV 738 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv 738 (952)
.++|.+.+.||+|+||+||+|++. +|+.||||++.... ....+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 457999999999999999999985 58999999986543 233567889999999999999999999988754 77999
Q ss_pred EEccCCCChhHHhhhcCC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeee----CCCCcEEEecccccc
Q 002214 739 LEYMPKGSLEDCMYASNF--NLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLL----DDSMVAHLSDFGIAK 812 (952)
Q Consensus 739 ~e~~~~g~L~~~l~~~~~--~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill----~~~~~~kl~Dfgla~ 812 (952)
|||+++|+|.+++..... .+++..++.++.|++.||+|| |++||+||||||+||++ +.++.+||+|||+|+
T Consensus 88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~ 164 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL---RENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (396)
T ss_dssp ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHH---HHCCEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence 999999999999876432 489999999999999999999 78999999999999999 788889999999998
Q ss_pred ccCCcCcccccccccccccccccccCc--------CCcCcccchHhHHHHHHHHHhCCCCCCccccCccch---hhhhcc
Q 002214 813 LLSEEDSMKQTQTLATIGYIAPEYGRE--------GQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSI---KRWIND 881 (952)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~---~~~~~~ 881 (952)
....... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.......... .+....
T Consensus 165 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~ 242 (396)
T 4eut_A 165 ELEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242 (396)
T ss_dssp ECCCGGG--SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHS
T ss_pred EccCCCc--cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcC
Confidence 7654332 234569999999998764 567889999999999999999999997543222111 111111
Q ss_pred chhhhhhhccccccch-----hhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 002214 882 SLPAVMNIMDTNLLSE-----DEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDL 944 (952)
Q Consensus 882 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~ 944 (952)
..+.....+....... ...........++..+.+++.+||..||++||++.|+++.++++.++
T Consensus 243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred CCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 1000000000000000 00000012245678899999999999999999999999999887654
No 191
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=4.2e-38 Score=339.20 Aligned_cols=258 Identities=23% Similarity=0.352 Sum_probs=207.0
Q ss_pred hccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccCc------hhhHHHHHHHHHHHhCCCCccceeeeEeecCCee
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQRE------GALNSFDAECEILKTIRHRNLVKIISSCTNHNFK 735 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 735 (952)
.++|++.+.||+|+||.||+|+.. +|+.||+|+++.... ...+.+.+|+.++++++||||+++++++.+.+..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 357999999999999999999985 689999999865431 1356789999999999999999999999999999
Q ss_pred EEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCC----cEEEeccccc
Q 002214 736 ALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSM----VAHLSDFGIA 811 (952)
Q Consensus 736 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~----~~kl~Dfgla 811 (952)
++||||+++++|.+++.... .+++..+..++.|++.||+|| |++||+||||||+||+++.++ .+||+|||++
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~ 159 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGVHYL---HSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159 (283)
T ss_dssp EEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEEeecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCccCCCCChHHEEEecCCCCCCceEEEecccc
Confidence 99999999999999987644 689999999999999999999 789999999999999998877 8999999999
Q ss_pred cccCCcCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhcc
Q 002214 812 KLLSEEDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMD 891 (952)
Q Consensus 812 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 891 (952)
........ .....+++.|+|||.+.+..++.++||||||+++|+|++|+.||......+ .... ...
T Consensus 160 ~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~-----------~~~ 225 (283)
T 3bhy_A 160 HKIEAGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE-TLTN-----------ISA 225 (283)
T ss_dssp EECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHH-----------HHT
T ss_pred eeccCCCc--ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHH-HHHH-----------hHh
Confidence 87644322 233568999999999998899999999999999999999999986522110 0000 000
Q ss_pred ccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH--HHHHHH
Q 002214 892 TNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR--LIKIRD 943 (952)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~--L~~i~~ 943 (952)
... .. .......++..+.+++.+||+.||++||++.|++++ ++++++
T Consensus 226 ~~~-~~----~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~ 274 (283)
T 3bhy_A 226 VNY-DF----DEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRR 274 (283)
T ss_dssp TCC-CC----CHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHH
T ss_pred ccc-CC----cchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHH
Confidence 000 00 011123457789999999999999999999999984 555543
No 192
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=5.7e-39 Score=360.57 Aligned_cols=253 Identities=15% Similarity=0.183 Sum_probs=198.6
Q ss_pred hccCCccceecCccceEEEEEEe-CCCcEEEEEEeecc---CchhhHHHHHHHH---HHHhCCCCccceee-------eE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQ---REGALNSFDAECE---ILKTIRHRNLVKII-------SS 728 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~---~l~~l~h~niv~l~-------~~ 728 (952)
.++|.+.+.||+|+||+||+|++ .+|+.||||++... .....+.+.+|+. ++++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46799999999999999999997 56999999998743 3345578899994 55555899999998 55
Q ss_pred eecCC-----------------eeEEEEEccCCCChhHHhhhcCC------CCCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 002214 729 CTNHN-----------------FKALVLEYMPKGSLEDCMYASNF------NLDIFQRLGIMIDVASALEYLHFGHSNPI 785 (952)
Q Consensus 729 ~~~~~-----------------~~~lv~e~~~~g~L~~~l~~~~~------~l~~~~~~~i~~~ia~~l~~Lh~~h~~~i 785 (952)
+..++ ..|+||||+ +|+|.+++..... .+++..++.++.|++.||+|| |++||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASL---HHYGL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHH---HHTTE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHH---HhCCe
Confidence 55443 278999999 6899999875431 233588889999999999999 78899
Q ss_pred EeCCCCCCCeeeCCCCcEEEeccccccccCCcCcccccccccccccccccccCcC-----------CcCcccchHhHHHH
Q 002214 786 VHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEEDSMKQTQTLATIGYIAPEYGREG-----------QVSIKGDVYNYGIM 854 (952)
Q Consensus 786 vH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----------~~~~~~Dv~slG~~ 854 (952)
+||||||+|||++.++.+||+|||+|+.... ......| +.|+|||++.+. .++.++|||||||+
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i 302 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV 302 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence 9999999999999999999999999986432 2233557 999999998877 89999999999999
Q ss_pred HHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHH
Q 002214 855 LMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEI 934 (952)
Q Consensus 855 l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev 934 (952)
+|||++|+.||........ .... .. ....+++++.+++.+||+.||++|||+.|+
T Consensus 303 l~elltg~~Pf~~~~~~~~-~~~~-----------~~-------------~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~ 357 (377)
T 3byv_A 303 IYWIWCADLPITKDAALGG-SEWI-----------FR-------------SCKNIPQPVRALLEGFLRYPKEDRLLPLQA 357 (377)
T ss_dssp HHHHHHSSCCC------CC-SGGG-----------GS-------------SCCCCCHHHHHHHHHHTCSSGGGCCCHHHH
T ss_pred HHHHHHCCCCCcccccccc-hhhh-----------hh-------------hccCCCHHHHHHHHHHcCCCchhCCCHHHH
Confidence 9999999999865321110 0000 00 012346789999999999999999999999
Q ss_pred HH--HHHHHHHHHhhhc
Q 002214 935 IS--RLIKIRDLLFANI 949 (952)
Q Consensus 935 ~~--~L~~i~~~~~~~~ 949 (952)
++ .++++++...+..
T Consensus 358 l~hp~f~~~~~~~~~~l 374 (377)
T 3byv_A 358 METPEYEQLRTELSAAL 374 (377)
T ss_dssp HTSHHHHHHHHHHHHHG
T ss_pred hhChHHHHHHHHHHHhh
Confidence 97 6777777665543
No 193
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=5.6e-39 Score=352.81 Aligned_cols=268 Identities=21% Similarity=0.293 Sum_probs=198.9
Q ss_pred ccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccCch-hhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEEEc
Q 002214 664 DQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQREG-ALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVLEY 741 (952)
Q Consensus 664 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 741 (952)
++|.+.+.||+|+||+||+|+.. +++.||||++...... ....+.+|++++++++||||+++++++..++..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 57999999999999999999985 7899999998654322 223456799999999999999999999999999999999
Q ss_pred cCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcCccc
Q 002214 742 MPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEEDSMK 821 (952)
Q Consensus 742 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 821 (952)
++ |+|.+++......+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++....... .
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~L---H~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~-~ 156 (324)
T 3mtl_A 82 LD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYC---HRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK-T 156 (324)
T ss_dssp CS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHH---HHTTEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCccCCCcCHHHEEECCCCCEEEccCcccccccCCcc-c
Confidence 97 589998888777799999999999999999999 789999999999999999999999999999986543322 2
Q ss_pred ccccccccccccccccCc-CCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhh---ccchhh-hhhhccc----
Q 002214 822 QTQTLATIGYIAPEYGRE-GQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWI---NDSLPA-VMNIMDT---- 892 (952)
Q Consensus 822 ~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~---- 892 (952)
.....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||......+ ...... ....+. .......
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~ 235 (324)
T 3mtl_A 157 YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE-QLHFIFRILGTPTEETWPGILSNEEFK 235 (324)
T ss_dssp ------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGCHHHH
T ss_pred cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCChHhchhhhcchhhc
Confidence 233568999999998876 568999999999999999999999996532111 111100 000000 0000000
Q ss_pred --cccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 893 --NLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 893 --~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
................+++++.+++.+||+.||++|||+.|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 236 TYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp HTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 000000000111234567889999999999999999999999873
No 194
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=1.4e-38 Score=342.95 Aligned_cols=251 Identities=25% Similarity=0.402 Sum_probs=198.5
Q ss_pred hccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccC-chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEEE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQR-EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVLE 740 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 740 (952)
.++|.+.+.||+|+||.||+|+. .+++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 100 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME 100 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence 36799999999999999999987 468999999987554 3345788999999999999999999999999999999999
Q ss_pred ccCCCChhHHhhhc---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeee---CCCCcEEEecccccccc
Q 002214 741 YMPKGSLEDCMYAS---NFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLL---DDSMVAHLSDFGIAKLL 814 (952)
Q Consensus 741 ~~~~g~L~~~l~~~---~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill---~~~~~~kl~Dfgla~~~ 814 (952)
|+++|+|.+.+... ...+++..+..++.|+++||+|| |++||+||||||+||++ +.++.+||+|||+++..
T Consensus 101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~L---H~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~ 177 (285)
T 3is5_A 101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYF---HSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177 (285)
T ss_dssp CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHH---HhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence 99999999988543 35799999999999999999999 78999999999999999 45688999999999866
Q ss_pred CCcCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccc
Q 002214 815 SEEDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNL 894 (952)
Q Consensus 815 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 894 (952)
.... ......+|+.|+|||.+. +.++.++||||||+++|||++|+.||......+ ..... .......
T Consensus 178 ~~~~--~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~--~~~~~--------~~~~~~~ 244 (285)
T 3is5_A 178 KSDE--HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEE--VQQKA--------TYKEPNY 244 (285)
T ss_dssp -----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHH--------HHCCCCC
T ss_pred CCcc--cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHH--HHhhh--------ccCCccc
Confidence 4332 223456899999999876 468899999999999999999999986532111 00000 0000000
Q ss_pred cchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 895 LSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
.. ....+++++.+++.+||+.||++|||+.|++++
T Consensus 245 ~~--------~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 245 AV--------ECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp CC----------CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred cc--------ccCcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 011246678999999999999999999999863
No 195
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.8e-37 Score=360.53 Aligned_cols=347 Identities=21% Similarity=0.160 Sum_probs=253.5
Q ss_pred ceeeccccccccCCCCCCCCCCccceEEcccCcccccCCccccCCCCCcEEEccCCcccccCCccccccCCccEEEeeCC
Q 002214 134 ALDFSDNSLTGSFPYDMCPGLPRLKGLYVSYNQFKGPIPNNLWHCKELSSVSLSYNQFTGRLPRDLGNSTKLKSLDLGFN 213 (952)
Q Consensus 134 ~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 213 (952)
.++.+++.++ .+|..+. ++++.|+|++|++++..+..|..+++|+.|+|++|.+++..|.+|+++++|++|+|++|
T Consensus 15 ~v~c~~~~l~-~ip~~~~---~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 15 AVLCHRKRFV-AVPEGIP---TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp EEECCSCCCS-SCCSCCC---TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcC-cCCCCCC---CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 4555666665 5666543 58899999999999888899999999999999999999888999999999999999999
Q ss_pred cCCccCchhhhccCCCcEeeeccccccccCCccccCCCCccEEEeeCccccccCCCCcccCCCCCcceEEcccCcCCCCC
Q 002214 214 NLNGEIPQEIGNLRNLEILGIDQSNLVGFVPDTIFNISTLKILSLFNNTLSGNLPSSKNLIGLPNLEGLNLGLNNLSGSI 293 (952)
Q Consensus 214 ~l~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 293 (952)
+++...+..|.++++|+.|+|++|++.+..+..|..+++|++|+|++|.+.+..+. .+.++++|++|++++|+++
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~--~~~~l~~L~~L~l~~n~l~--- 165 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHR--AFSGLNSLEQLTLEKCNLT--- 165 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTT--SSTTCTTCCEEEEESCCCS---
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChh--hccCCCCCCEEECCCCcCc---
Confidence 99977777899999999999999999999999999999999999999998755332 2445555555555555544
Q ss_pred CcccccchhhhhhhccccCccccccccCcceeechhhHHHHHHHhhccccccccCCCcccEEEccCCCCCCCCCcccccC
Q 002214 294 PSFFFNASKLYALELGYNSNLKRLGLERNYLTFSTSELMSLFSALVNCKSLKIGNLINLTTLSLGDNNLSGSLPITLGRL 373 (952)
Q Consensus 294 ~~~~~~~~~L~~l~l~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l 373 (952)
+..+..|..+
T Consensus 166 ----------------------------------------------------------------------~~~~~~l~~l 175 (477)
T 2id5_A 166 ----------------------------------------------------------------------SIPTEALSHL 175 (477)
T ss_dssp ----------------------------------------------------------------------SCCHHHHTTC
T ss_pred ----------------------------------------------------------------------ccChhHhccc
Confidence 3333344444
Q ss_pred CCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCccCCCCCCcEEeccccccCCcCCccccCCCCCceeEe
Q 002214 374 KKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLRILSLSSNELTSVIPSTFWNLEDILGFDF 453 (952)
Q Consensus 374 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 453 (952)
++|+.|+|++|.+.+..+..|..+++|+.|++++|.+.+.+|.......+|++|++++|+++++++..|..+++|+.|+|
T Consensus 176 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 255 (477)
T 2id5_A 176 HGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNL 255 (477)
T ss_dssp TTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEEC
T ss_pred CCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeEC
Confidence 55555555555554444445555555555555555544444444444556777777777776655566777777777777
Q ss_pred cCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEccCccccCcccccccccccccEEeCCCCccccc
Q 002214 454 SSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNKLQGPIPESFGELVSLEFLDLSNNDLSGV 533 (952)
Q Consensus 454 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 533 (952)
++|.+++..+..|..+++|+.|+|++|+++++.|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++...
T Consensus 256 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~ 335 (477)
T 2id5_A 256 SYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACD 335 (477)
T ss_dssp CSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECS
T ss_pred CCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCc
Confidence 77777766666777777888888888888877788888888888888888888877777788888888888888888743
Q ss_pred CccchhcccccccccccccccccCCCC
Q 002214 534 IPASLEKLLYLKSLNLSFNKLVGEIPR 560 (952)
Q Consensus 534 ~~~~~~~l~~L~~L~l~~N~l~~~~p~ 560 (952)
-+ ...-...+..+++.++...|..|.
T Consensus 336 c~-~~~~~~~~~~~~~~~~~~~C~~p~ 361 (477)
T 2id5_A 336 CR-LLWVFRRRWRLNFNRQQPTCATPE 361 (477)
T ss_dssp GG-GHHHHTTTTSSCCTTCCCBEEESG
T ss_pred cc-hHhHHhhhhccccCccCceeCCch
Confidence 22 222223344566777777777665
No 196
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=4.5e-38 Score=361.03 Aligned_cols=264 Identities=20% Similarity=0.274 Sum_probs=212.3
Q ss_pred hccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccCchhhHHHHHHHHHHHhCCC-CccceeeeEeecCCeeEEEEE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQREGALNSFDAECEILKTIRH-RNLVKIISSCTNHNFKALVLE 740 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~e 740 (952)
.++|++.+.||+|+||.||+|++ .+++.||||++...... ..+.+|+++++.++| +++..+..++.+.+..++|||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS--CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc--HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 46899999999999999999997 57999999987654432 457899999999987 556666667777888999999
Q ss_pred ccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeee---CCCCcEEEeccccccccCCc
Q 002214 741 YMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLL---DDSMVAHLSDFGIAKLLSEE 817 (952)
Q Consensus 741 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill---~~~~~~kl~Dfgla~~~~~~ 817 (952)
|+ +++|.+++......+++.+++.++.||+.||+|| |++||+||||||+|||+ +.++.+||+|||+|+.+...
T Consensus 84 ~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yL---H~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (483)
T 3sv0_A 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFV---HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT 159 (483)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred CC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH---HHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCC
Confidence 99 9999999987667899999999999999999999 78999999999999999 68899999999999876543
Q ss_pred Ccc------cccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhcc
Q 002214 818 DSM------KQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMD 891 (952)
Q Consensus 818 ~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 891 (952)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+. .+..
T Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~--~~~~~-------~i~~ 230 (483)
T 3sv0_A 160 STHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK--KQKYE-------KISE 230 (483)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSH--HHHHH-------HHHH
T ss_pred ccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhH--HHHHH-------HHhh
Confidence 321 12245799999999999999999999999999999999999999976432211 00000 0000
Q ss_pred ccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHH
Q 002214 892 TNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLL 945 (952)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~ 945 (952)
... ..........+++++.+++..||+.||++||++.+|++.|+++....
T Consensus 231 ~~~----~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~ 280 (483)
T 3sv0_A 231 KKV----ATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIRE 280 (483)
T ss_dssp HHH----HSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred ccc----cccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHc
Confidence 000 00011123456889999999999999999999999999999997754
No 197
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=4.1e-39 Score=369.95 Aligned_cols=250 Identities=22% Similarity=0.301 Sum_probs=196.9
Q ss_pred HhccCCccceecCccceEEEEEEe-CCCcEEEEEEeecc---CchhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEE
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQ---REGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKAL 737 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 737 (952)
..++|++.+.||+|+||.||+|+. .+|+.||||++... .......+.+|+.++++++||||+++++++...+..++
T Consensus 146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 225 (446)
T 4ejn_A 146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF 225 (446)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEE
T ss_pred ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEE
Confidence 346899999999999999999987 46899999998753 23334667889999999999999999999999999999
Q ss_pred EEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCC-CCeEeCCCCCCCeeeCCCCcEEEeccccccccCC
Q 002214 738 VLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHS-NPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSE 816 (952)
Q Consensus 738 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~-~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~ 816 (952)
||||+++|+|.+++.... .+++..+..++.|++.||+|| |+ +||+||||||+|||++.++.+||+|||+|+....
T Consensus 226 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~L---H~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 301 (446)
T 4ejn_A 226 VMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYL---HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK 301 (446)
T ss_dssp EECCCSSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHH---HHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC
T ss_pred EEeeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---hhcCCEEECCCCHHHEEECCCCCEEEccCCCceeccC
Confidence 999999999999887654 689999999999999999999 66 8999999999999999999999999999986433
Q ss_pred cCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccc
Q 002214 817 EDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLS 896 (952)
Q Consensus 817 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 896 (952)
.. .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .... .+.....
T Consensus 302 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~----------~i~~~~~-- 366 (446)
T 4ejn_A 302 DG-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFE----------LILMEEI-- 366 (446)
T ss_dssp ------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHH----------HHHHCCC--
T ss_pred CC-cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH--HHHH----------HHHhCCC--
Confidence 22 2233467999999999999999999999999999999999999998652110 0000 0000000
Q ss_pred hhhHHHHHhhhhhHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 002214 897 EDEEHANVAKQSCASSVLSLAMECTSESPENRV-----NTKEIISR 937 (952)
Q Consensus 897 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~ev~~~ 937 (952)
..+..+++++.+++.+||+.||++|| ++.|++++
T Consensus 367 -------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 367 -------RFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp -------CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred -------CCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 01234567899999999999999999 99999864
No 198
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=5.8e-38 Score=349.20 Aligned_cols=271 Identities=22% Similarity=0.328 Sum_probs=203.0
Q ss_pred hccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccC--chhhHHHHHHHHHHHhCCCCccceeeeEeec--------
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQR--EGALNSFDAECEILKTIRHRNLVKIISSCTN-------- 731 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-------- 731 (952)
.++|++.+.||+|+||.||+|++ .+|+.||||++.... ......+.+|+.++++++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 46899999999999999999998 579999999986543 2234578899999999999999999999876
Q ss_pred CCeeEEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccc
Q 002214 732 HNFKALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIA 811 (952)
Q Consensus 732 ~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla 811 (952)
.+..++||||+++ ++.+.+......+++.++..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+|
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~L---H~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYI---HRNKILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH---HHCCeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 3468999999975 78787777666799999999999999999999 7899999999999999999999999999999
Q ss_pred cccCCcCc---ccccccccccccccccccCc-CCcCcccchHhHHHHHHHHHhCCCCCCccccCcc--chhhhhccchhh
Q 002214 812 KLLSEEDS---MKQTQTLATIGYIAPEYGRE-GQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEM--SIKRWINDSLPA 885 (952)
Q Consensus 812 ~~~~~~~~---~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~--~~~~~~~~~~~~ 885 (952)
+.+..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+. ...+......+.
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 251 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 251 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChh
Confidence 87653221 22234568999999998875 4579999999999999999999999875321110 000000000000
Q ss_pred hh---------hhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 886 VM---------NIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 886 ~~---------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
.. ..+...................++++.+++.+||+.||++|||++|++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 252 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp TSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 00 00000000000000111112235678999999999999999999999875
No 199
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.4e-38 Score=343.06 Aligned_cols=254 Identities=26% Similarity=0.413 Sum_probs=207.2
Q ss_pred HHhccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEeec--------
Q 002214 661 RATDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSCTN-------- 731 (952)
Q Consensus 661 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-------- 731 (952)
...++|++.+.||+|+||.||+|++. +|+.||+|++.... +.+.+|++++++++||||+++++++..
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 83 (284)
T 2a19_B 8 RFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETS 83 (284)
T ss_dssp HHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC----
T ss_pred hhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccc
Confidence 34568999999999999999999985 79999999987543 346789999999999999999998854
Q ss_pred --------CCeeEEEEEccCCCChhHHhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCc
Q 002214 732 --------HNFKALVLEYMPKGSLEDCMYAS-NFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMV 802 (952)
Q Consensus 732 --------~~~~~lv~e~~~~g~L~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~ 802 (952)
....++||||+++|+|.+++... ...+++..++.++.|++.||+|| |++||+||||||+||+++.++.
T Consensus 84 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~ 160 (284)
T 2a19_B 84 SKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYI---HSKKLINRDLKPSNIFLVDTKQ 160 (284)
T ss_dssp -----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEEETTE
T ss_pred cccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeeccCCHHHEEEcCCCC
Confidence 34579999999999999999754 34689999999999999999999 7889999999999999999999
Q ss_pred EEEeccccccccCCcCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccc
Q 002214 803 AHLSDFGIAKLLSEEDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDS 882 (952)
Q Consensus 803 ~kl~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~ 882 (952)
+||+|||++....... ......+++.|+|||.+.+..++.++||||||+++|||++|..|+.... .+.
T Consensus 161 ~kl~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-------~~~--- 228 (284)
T 2a19_B 161 VKIGDFGLVTSLKNDG--KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS-------KFF--- 228 (284)
T ss_dssp EEECCCTTCEESSCCS--CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH-------HHH---
T ss_pred EEECcchhheeccccc--cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH-------HHH---
Confidence 9999999998765432 2233568999999999988889999999999999999999998863210 000
Q ss_pred hhhhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHHhhh
Q 002214 883 LPAVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLLFAN 948 (952)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~~~~ 948 (952)
....... .+..++.++.+++.+||+.||++|||+.|++++|+.+++....+
T Consensus 229 ----~~~~~~~-----------~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~~ 279 (284)
T 2a19_B 229 ----TDLRDGI-----------ISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEKN 279 (284)
T ss_dssp ----HHHHTTC-----------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-----
T ss_pred ----HHhhccc-----------ccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCcc
Confidence 0000000 11234667899999999999999999999999999988766544
No 200
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3.2e-38 Score=352.77 Aligned_cols=276 Identities=23% Similarity=0.275 Sum_probs=209.4
Q ss_pred cccCHHHHHHHhccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccCchhhHHHHHHHHHHHhCC-----CCcccee
Q 002214 652 RRYSHDELLRATDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQREGALNSFDAECEILKTIR-----HRNLVKI 725 (952)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~l 725 (952)
..++..+.....++|.+.+.||+|+||+||+|++ .+++.||||+++.. ......+..|+.++++++ ||||+++
T Consensus 23 ~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~ 101 (360)
T 3llt_A 23 VHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKY 101 (360)
T ss_dssp GSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCE
T ss_pred eeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecc
Confidence 3445555555678999999999999999999998 57899999998643 233466788999999996 9999999
Q ss_pred eeEeecCCeeEEEEEccCCCChhHHhhhcC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCC-----
Q 002214 726 ISSCTNHNFKALVLEYMPKGSLEDCMYASN-FNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDD----- 799 (952)
Q Consensus 726 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~----- 799 (952)
++++...+..++||||+ +++|.+++.... ..+++..+..++.|++.||+|| |++||+||||||+||+++.
T Consensus 102 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~~~~~ 177 (360)
T 3llt_A 102 HGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYL---RKMSLTHTDLKPENILLDDPYFEK 177 (360)
T ss_dssp EEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEESCTTCCE
T ss_pred cceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeeCCCCcccEEEccccccc
Confidence 99999999999999999 999999987654 3589999999999999999999 7899999999999999975
Q ss_pred --------------------CCcEEEeccccccccCCcCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHH
Q 002214 800 --------------------SMVAHLSDFGIAKLLSEEDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVF 859 (952)
Q Consensus 800 --------------------~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~ 859 (952)
++.+||+|||+|+..... .....||+.|+|||++.+..++.++|||||||++|||+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell 253 (360)
T 3llt_A 178 SLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELY 253 (360)
T ss_dssp EEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHH
T ss_pred cccchhcccccccccccccCCCCEEEEeccCceecCCC----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHH
Confidence 889999999999865432 23456899999999999999999999999999999999
Q ss_pred hCCCCCCccccCccchhhhhc--cchhh-h---------hhhccccc-c-------chhhH------HHHHhhhhhHHHH
Q 002214 860 TGMKPTNEFFTGEMSIKRWIN--DSLPA-V---------MNIMDTNL-L-------SEDEE------HANVAKQSCASSV 913 (952)
Q Consensus 860 tg~~p~~~~~~~~~~~~~~~~--~~~~~-~---------~~~~~~~~-~-------~~~~~------~~~~~~~~~~~~l 913 (952)
+|+.||......+ ....... ...+. . ...++... . ..... .....+...++.+
T Consensus 254 ~g~~pf~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l 332 (360)
T 3llt_A 254 TGSLLFRTHEHME-HLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELF 332 (360)
T ss_dssp HSSCSCCCSSHHH-HHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHH
T ss_pred HCCCCCCCCcHHH-HHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHH
Confidence 9999996532111 0100000 00000 0 00000000 0 00000 0000111223678
Q ss_pred HHHHhhccccCCCCCCCHHHHHHH
Q 002214 914 LSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 914 ~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
.+++.+||+.||++|||++|++++
T Consensus 333 ~~li~~~L~~dP~~Rpta~elL~h 356 (360)
T 3llt_A 333 CDFLYSILQIDPTLRPSPAELLKH 356 (360)
T ss_dssp HHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred HHHHHHHhcCChhhCCCHHHHhcC
Confidence 899999999999999999999864
No 201
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=7e-39 Score=356.82 Aligned_cols=247 Identities=27% Similarity=0.317 Sum_probs=193.6
Q ss_pred hccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccC---chhhHHHHHHHHH-HHhCCCCccceeeeEeecCCeeEE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQR---EGALNSFDAECEI-LKTIRHRNLVKIISSCTNHNFKAL 737 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~l 737 (952)
.++|++.+.||+|+||.||+|+.+ +++.||||+++... ......+.+|..+ ++.++||||+++++++.+.+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 467999999999999999999985 58899999996543 2233456677776 567899999999999999999999
Q ss_pred EEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCc
Q 002214 738 VLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEE 817 (952)
Q Consensus 738 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 817 (952)
||||+++|+|.+++...+ .+++..+..++.||+.||+|| |++||+||||||+||+++.++.+||+|||+|+.....
T Consensus 117 v~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~L---H~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~ 192 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYL---HSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192 (373)
T ss_dssp EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred EEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence 999999999999987654 689999999999999999999 7899999999999999999999999999999864322
Q ss_pred CcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccch
Q 002214 818 DSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSE 897 (952)
Q Consensus 818 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 897 (952)
. ......+||+.|+|||++.+..++.++|||||||++|||++|..||...... ..+. .++....
T Consensus 193 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-~~~~-----------~i~~~~~--- 256 (373)
T 2r5t_A 193 N-STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA-EMYD-----------NILNKPL--- 256 (373)
T ss_dssp C-CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHH-HHHH-----------HHHHSCC---
T ss_pred C-CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH-HHHH-----------HHHhccc---
Confidence 2 2233467999999999999999999999999999999999999998642110 0011 1111110
Q ss_pred hhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHH
Q 002214 898 DEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEII 935 (952)
Q Consensus 898 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~ 935 (952)
..+..++.++.+++.+||+.||++||++.+.+
T Consensus 257 ------~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~ 288 (373)
T 2r5t_A 257 ------QLKPNITNSARHLLEGLLQKDRTKRLGAKDDF 288 (373)
T ss_dssp ------CCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTH
T ss_pred ------CCCCCCCHHHHHHHHHHcccCHHhCCCCCCCH
Confidence 01234567899999999999999999986433
No 202
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=2.4e-38 Score=348.56 Aligned_cols=260 Identities=24% Similarity=0.407 Sum_probs=206.6
Q ss_pred hccCCccceecCccceEEEEEEe------CCCcEEEEEEeecc-CchhhHHHHHHHHHHHhCCCCccceeeeEeecCCee
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRF------PDGIEVAIKVFHLQ-REGALNSFDAECEILKTIRHRNLVKIISSCTNHNFK 735 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 735 (952)
.++|++.+.||+|+||.||+|++ .+++.||||++... .......+.+|+.++++++||||+++++++.+.+..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 46899999999999999999984 35778999998644 234456789999999999999999999999999999
Q ss_pred EEEEEccCCCChhHHhhhcC------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCC---CCcEEEe
Q 002214 736 ALVLEYMPKGSLEDCMYASN------FNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDD---SMVAHLS 806 (952)
Q Consensus 736 ~lv~e~~~~g~L~~~l~~~~------~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~---~~~~kl~ 806 (952)
++||||+++|+|.+++.... ..+++..++.++.|++.||+|| |++||+||||||+||+++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~L---H~~~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL---EENHFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHH---hhCCeecCcCCHhHEEEecCCCcceEEEC
Confidence 99999999999999998654 3589999999999999999999 7889999999999999984 4569999
Q ss_pred ccccccccCCcCcc-cccccccccccccccccCcCCcCcccchHhHHHHHHHHHh-CCCCCCccccCccchhhhhccchh
Q 002214 807 DFGIAKLLSEEDSM-KQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFT-GMKPTNEFFTGEMSIKRWINDSLP 884 (952)
Q Consensus 807 Dfgla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 884 (952)
|||+++........ ......+++.|+|||.+.+..++.++||||||+++|||+| |..||...... ...
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~-------- 255 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--EVL-------- 255 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHH--------
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH--HHH--------
Confidence 99999865332221 2223467899999999988889999999999999999998 89998652111 111
Q ss_pred hhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHH
Q 002214 885 AVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLL 945 (952)
Q Consensus 885 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~ 945 (952)
..+..... ...+..++.++.+++.+||+.||++||++.|++++|+.+.+.-
T Consensus 256 ---~~~~~~~~-------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 256 ---EFVTSGGR-------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp ---HHHHTTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred ---HHHhcCCC-------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 00100000 0012345778999999999999999999999999999887643
No 203
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=4e-38 Score=359.67 Aligned_cols=271 Identities=21% Similarity=0.281 Sum_probs=200.0
Q ss_pred HhccCCccceecCccceEEEEEEe-CCCcEEEEEEeecc--CchhhHHHHHHHHHHHhCCCCccceeeeEeecC-----C
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQ--REGALNSFDAECEILKTIRHRNLVKIISSCTNH-----N 733 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~ 733 (952)
..++|.+.+.||+|+||.||+|++ .+|+.||||++... .....+++.+|++++++++||||+++++++... .
T Consensus 24 i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 103 (432)
T 3n9x_A 24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD 103 (432)
T ss_dssp CCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred ecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence 356899999999999999999987 46899999998643 233456889999999999999999999999766 5
Q ss_pred eeEEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccc
Q 002214 734 FKALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKL 813 (952)
Q Consensus 734 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~ 813 (952)
..|+||||++ |+|.+++... ..+++..+..++.||++||+|| |++||+||||||+||+++.++.+||+|||+|+.
T Consensus 104 ~~~lv~e~~~-~~L~~~~~~~-~~l~~~~~~~i~~qil~aL~~L---H~~givHrDlkp~NILl~~~~~~kL~DFGla~~ 178 (432)
T 3n9x_A 104 ELYIVLEIAD-SDLKKLFKTP-IFLTEEHIKTILYNLLLGENFI---HESGIIHRDLKPANCLLNQDCSVKVCDFGLART 178 (432)
T ss_dssp CEEEEEECCS-EEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEecCC-cCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHH---HHCCCCCCCCCHHHeEECCCCCEEEccCCCccc
Confidence 6899999996 5999988754 3699999999999999999999 789999999999999999999999999999997
Q ss_pred cCCcCcc---------------------ccccccccccccccccc-CcCCcCcccchHhHHHHHHHHHhCCCCCCccccC
Q 002214 814 LSEEDSM---------------------KQTQTLATIGYIAPEYG-REGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTG 871 (952)
Q Consensus 814 ~~~~~~~---------------------~~~~~~~~~~y~aPE~~-~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~ 871 (952)
....... .....+||+.|+|||++ ....++.++||||+||++|||++|..||.....+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~ 258 (432)
T 3n9x_A 179 INSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTN 258 (432)
T ss_dssp C-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGG
T ss_pred ccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccccccccc
Confidence 6543211 12446799999999975 5667999999999999999999977666432211
Q ss_pred ccchh---------------hhh----ccchhhhhhhccccc-------------------cchhhHHHHHhhhhhHHHH
Q 002214 872 EMSIK---------------RWI----NDSLPAVMNIMDTNL-------------------LSEDEEHANVAKQSCASSV 913 (952)
Q Consensus 872 ~~~~~---------------~~~----~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~l 913 (952)
...+. .+. ......+.+.+.... ..............+++++
T Consensus 259 ~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 338 (432)
T 3n9x_A 259 RFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDG 338 (432)
T ss_dssp CCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHH
T ss_pred ccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHH
Confidence 11000 000 000000000000000 0000000001113467889
Q ss_pred HHHHhhccccCCCCCCCHHHHHHH
Q 002214 914 LSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 914 ~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
.+|+.+||..||++|||+.|++++
T Consensus 339 ~dLl~~mL~~dP~~R~ta~e~L~H 362 (432)
T 3n9x_A 339 INLLESMLKFNPNKRITIDQALDH 362 (432)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHHTC
T ss_pred HHHHHHHhcCCcccCCCHHHHhcC
Confidence 999999999999999999999875
No 204
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1.9e-38 Score=345.42 Aligned_cols=253 Identities=23% Similarity=0.352 Sum_probs=202.3
Q ss_pred HhccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEEE
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVLE 740 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 740 (952)
..++|++.+.||+|+||.||+|++. +++.||+|++........+.+.+|++++++++||||+++++++..++..++|||
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 3568999999999999999999985 589999999976666666889999999999999999999999999999999999
Q ss_pred ccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcCcc
Q 002214 741 YMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEEDSM 820 (952)
Q Consensus 741 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 820 (952)
|+++++|.+++......+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||++...... ..
T Consensus 97 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~ 172 (302)
T 2j7t_A 97 FCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFL---HSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT-LQ 172 (302)
T ss_dssp CCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH-HH
T ss_pred eCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHH---hcCCcccCCCCHHHEEECCCCCEEEEECCCCcccccc-cc
Confidence 9999999999887666799999999999999999999 7889999999999999999999999999998643211 11
Q ss_pred ccccccccccccccccc-----CcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhcccccc
Q 002214 821 KQTQTLATIGYIAPEYG-----REGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLL 895 (952)
Q Consensus 821 ~~~~~~~~~~y~aPE~~-----~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 895 (952)
......|++.|+|||++ .+..++.++||||||+++|||++|+.||....... ......... ....
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~--------~~~~- 242 (302)
T 2j7t_A 173 KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR-VLLKIAKSD--------PPTL- 242 (302)
T ss_dssp C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHSC--------CCCC-
T ss_pred ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH-HHHHHhccC--------Cccc-
Confidence 12235689999999987 46678899999999999999999999986532110 000000000 0000
Q ss_pred chhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHH
Q 002214 896 SEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIIS 936 (952)
Q Consensus 896 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 936 (952)
..+..++.++.+++.+||+.||++|||+.|+++
T Consensus 243 --------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 243 --------LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp --------SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred --------CCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 112345778999999999999999999999986
No 205
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.8e-38 Score=350.26 Aligned_cols=253 Identities=23% Similarity=0.351 Sum_probs=201.3
Q ss_pred HhccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccCchhhHHHHHHHHHHHhC-CCCccceeeeEeecCCeeEEEE
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQREGALNSFDAECEILKTI-RHRNLVKIISSCTNHNFKALVL 739 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 739 (952)
..++|.+.+.||+|+||.||+|.++ +|+.||||++..... ...+|++++.++ +||||+++++++.+++..|+||
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 95 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT 95 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence 4568999999999999999999884 689999999865433 235688888888 7999999999999999999999
Q ss_pred EccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCC----CcEEEeccccccccC
Q 002214 740 EYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDS----MVAHLSDFGIAKLLS 815 (952)
Q Consensus 740 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~----~~~kl~Dfgla~~~~ 815 (952)
||+++|+|.+++...+ .+++..+..++.|++.||+|| |++||+||||||+||++..+ +.+||+|||+++...
T Consensus 96 E~~~gg~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~l---H~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~ 171 (342)
T 2qr7_A 96 ELMKGGELLDKILRQK-FFSEREASAVLFTITKTVEYL---HAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR 171 (342)
T ss_dssp CCCCSCBHHHHHHTCT-TCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECB
T ss_pred eCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCc
Confidence 9999999999887654 689999999999999999999 78999999999999998533 359999999998764
Q ss_pred CcCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhcccccc
Q 002214 816 EEDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLL 895 (952)
Q Consensus 816 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 895 (952)
.... ......+|+.|+|||++.+..++.++|||||||++|||++|..||...... ....... .+......
T Consensus 172 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~~~~-------~i~~~~~~ 241 (342)
T 2qr7_A 172 AENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD--TPEEILA-------RIGSGKFS 241 (342)
T ss_dssp CTTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS--CHHHHHH-------HHHHCCCC
T ss_pred CCCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC--CHHHHHH-------HHccCCcc
Confidence 3322 223457899999999998888999999999999999999999999652211 1111110 00000000
Q ss_pred chhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 896 SEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 896 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
... ..+..+++++.+++.+||..||++||++.|++++
T Consensus 242 ~~~-----~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 242 LSG-----GYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp CCS-----TTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred cCc-----cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 000 0123457789999999999999999999999875
No 206
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=7e-38 Score=338.70 Aligned_cols=248 Identities=23% Similarity=0.363 Sum_probs=199.7
Q ss_pred ccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccC--chhhHHHHHHHHHHHhCCCCccceeeeEeec----CCeeE
Q 002214 664 DQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQR--EGALNSFDAECEILKTIRHRNLVKIISSCTN----HNFKA 736 (952)
Q Consensus 664 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~ 736 (952)
..|.+.+.||+|+||.||+|.+ .++..||+|++.... ....+.+.+|+.++++++||||+++++++.. ....+
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 4578889999999999999987 468899999986542 3345778999999999999999999998865 35689
Q ss_pred EEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeCCCCCCCeeeC-CCCcEEEeccccccc
Q 002214 737 LVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNP--IVHCDIKPSNVLLD-DSMVAHLSDFGIAKL 813 (952)
Q Consensus 737 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~--ivH~Dlk~~Nill~-~~~~~kl~Dfgla~~ 813 (952)
+||||+++|+|.+++.... .+++..+..++.|++.||+|| |+.+ |+||||||+||+++ .++.+||+|||++..
T Consensus 106 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~l---H~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~ 181 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFL---HTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred EEEEecCCCCHHHHHHHcc-CCCHHHHHHHHHHHHHHHHHH---HcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCccc
Confidence 9999999999999997654 689999999999999999999 6777 99999999999998 889999999999976
Q ss_pred cCCcCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhcccc
Q 002214 814 LSEEDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTN 893 (952)
Q Consensus 814 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 893 (952)
..... .....||+.|+|||.+.+ .++.++||||+|+++|+|++|+.||................
T Consensus 182 ~~~~~---~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~------------ 245 (290)
T 1t4h_A 182 KRASF---AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSG------------ 245 (290)
T ss_dssp CCTTS---BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTT------------
T ss_pred ccccc---cccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhcc------------
Confidence 53322 233568999999998764 58999999999999999999999986532221111111100
Q ss_pred ccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 894 LLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
... ...+..+++++.+++.+||+.||++|||+.|++++
T Consensus 246 ~~~------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 246 VKP------ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp CCC------GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCc------cccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 000 01123345679999999999999999999999864
No 207
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=2.7e-38 Score=340.80 Aligned_cols=247 Identities=24% Similarity=0.384 Sum_probs=205.6
Q ss_pred hccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccC---chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQR---EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALV 738 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 738 (952)
.++|.+.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 367999999999999999999885 68899999986432 22346789999999999999999999999999999999
Q ss_pred EEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcC
Q 002214 739 LEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEED 818 (952)
Q Consensus 739 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 818 (952)
|||+++|+|.+++...+ .+++..+..++.|+++|++|| |++||+||||||+||+++.++.+||+|||++......
T Consensus 93 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~- 167 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYC---HERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL- 167 (284)
T ss_dssp ECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSS-
T ss_pred EEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCceecCCCHHHEEEcCCCCEEEecccccccCccc-
Confidence 99999999999987654 689999999999999999999 7899999999999999999999999999999765432
Q ss_pred cccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccchh
Q 002214 819 SMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSED 898 (952)
Q Consensus 819 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 898 (952)
......|++.|+|||.+.+..++.++||||||+++|||++|+.||......+ .. ..+.....
T Consensus 168 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~-----------~~~~~~~~---- 229 (284)
T 2vgo_A 168 --RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE-TH-----------RRIVNVDL---- 229 (284)
T ss_dssp --CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH-HH-----------HHHHTTCC----
T ss_pred --ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhH-HH-----------HHHhcccc----
Confidence 2233568999999999999899999999999999999999999986521110 00 00111000
Q ss_pred hHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 899 EEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 899 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
..+..++.++.+++.+||+.||++||++.|++++
T Consensus 230 -----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 230 -----KFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp -----CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred -----CCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 0123356789999999999999999999999874
No 208
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.7e-39 Score=356.03 Aligned_cols=255 Identities=24% Similarity=0.319 Sum_probs=205.2
Q ss_pred hccCCccceecCccceEEEEEEe----CCCcEEEEEEeeccC----chhhHHHHHHHHHHHhC-CCCccceeeeEeecCC
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRF----PDGIEVAIKVFHLQR----EGALNSFDAECEILKTI-RHRNLVKIISSCTNHN 733 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 733 (952)
.++|++.+.||+|+||.||+|+. .+|+.||||+++... ....+.+.+|+++++++ +||||+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 46899999999999999999987 478999999986432 22345677899999999 6999999999999999
Q ss_pred eeEEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccc
Q 002214 734 FKALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKL 813 (952)
Q Consensus 734 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~ 813 (952)
..++||||+++|+|.+++.... .+++..+..++.|+++||+|| |++||+||||||+||+++.++.+||+|||+++.
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 208 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHL---HKLGIIYRDIKLENILLDSNGHVVLTDFGLSKE 208 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred eEEEEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEECCCCcEEEeeCCCCee
Confidence 9999999999999999987654 689999999999999999999 788999999999999999999999999999987
Q ss_pred cCCcCcccccccccccccccccccCc--CCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhcc
Q 002214 814 LSEEDSMKQTQTLATIGYIAPEYGRE--GQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMD 891 (952)
Q Consensus 814 ~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 891 (952)
.............||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ....+... ...
T Consensus 209 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-~~~~~~~~-------~~~ 280 (355)
T 1vzo_A 209 FVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN-SQAEISRR-------ILK 280 (355)
T ss_dssp CCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC-CHHHHHHH-------HHH
T ss_pred cccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc-hHHHHHHH-------Hhc
Confidence 65444434445679999999999875 347889999999999999999999986532211 11111100 000
Q ss_pred ccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCC-----CHHHHHHHH
Q 002214 892 TNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRV-----NTKEIISRL 938 (952)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~ev~~~L 938 (952)
.. ...+..++..+.+++.+||..||++|| ++.|++++.
T Consensus 281 ~~---------~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 281 SE---------PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp CC---------CCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred cC---------CCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 00 001234567799999999999999999 999998764
No 209
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=5.5e-38 Score=346.39 Aligned_cols=263 Identities=19% Similarity=0.266 Sum_probs=202.8
Q ss_pred hccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccCchhhHHHHHHHHHHHhCC-CCccceeeeEeec--CCeeEEE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQREGALNSFDAECEILKTIR-HRNLVKIISSCTN--HNFKALV 738 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~--~~~~~lv 738 (952)
.++|++.+.||+|+||+||+|++ .+++.||||+++... .+.+.+|+.++++++ ||||+++++++.+ ....++|
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv 111 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 111 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence 36799999999999999999987 578999999986433 367899999999997 9999999999987 5678999
Q ss_pred EEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCC-cEEEeccccccccCCc
Q 002214 739 LEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSM-VAHLSDFGIAKLLSEE 817 (952)
Q Consensus 739 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~-~~kl~Dfgla~~~~~~ 817 (952)
|||+++++|.+++. .+++.++..++.|++.||+|| |++||+||||||+||+++.++ .+||+|||+|+.....
T Consensus 112 ~e~~~~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~ 184 (330)
T 3nsz_A 112 FEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYC---HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 184 (330)
T ss_dssp EECCCCCCHHHHGG----GCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred EeccCchhHHHHHH----hCCHHHHHHHHHHHHHHHHHH---HhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCC
Confidence 99999999999875 388999999999999999999 789999999999999999776 8999999999876543
Q ss_pred CcccccccccccccccccccCc-CCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccch-hhhhhhccccc-
Q 002214 818 DSMKQTQTLATIGYIAPEYGRE-GQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSL-PAVMNIMDTNL- 894 (952)
Q Consensus 818 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~- 894 (952)
.. .....+++.|+|||++.+ ..++.++|||||||++|||++|+.||.................. +...+.++...
T Consensus 185 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 262 (330)
T 3nsz_A 185 QE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI 262 (330)
T ss_dssp CC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTC
T ss_pred Cc--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhcc
Confidence 32 234568999999998876 67899999999999999999999998543222211111111000 01111111000
Q ss_pred --------------cchhhH-HHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 895 --------------LSEDEE-HANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 895 --------------~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
...... .....+..+++++.+++.+||+.||++|||++|++++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 263 ELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp CCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred ccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 000000 0001123367889999999999999999999999874
No 210
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=5.1e-38 Score=350.60 Aligned_cols=257 Identities=26% Similarity=0.388 Sum_probs=207.5
Q ss_pred HHHHHhccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccCc--------hhhHHHHHHHHHHHhC-CCCccceeee
Q 002214 658 ELLRATDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQRE--------GALNSFDAECEILKTI-RHRNLVKIIS 727 (952)
Q Consensus 658 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l-~h~niv~l~~ 727 (952)
......++|.+.+.||+|+||.||+|++. +|+.||||+++.... ...+.+.+|+.+++++ +||||+++++
T Consensus 88 ~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 167 (365)
T 2y7j_A 88 AAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLID 167 (365)
T ss_dssp HHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEE
T ss_pred hhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEE
Confidence 34455678999999999999999999985 799999999865431 1245688999999999 7999999999
Q ss_pred EeecCCeeEEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEec
Q 002214 728 SCTNHNFKALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSD 807 (952)
Q Consensus 728 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~D 807 (952)
++...+..++||||+++++|.+++.... .+++..+..++.|++.||+|| |+.||+||||||+||+++.++.+||+|
T Consensus 168 ~~~~~~~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~L---H~~gi~H~Dlkp~NIl~~~~~~ikl~D 243 (365)
T 2y7j_A 168 SYESSSFMFLVFDLMRKGELFDYLTEKV-ALSEKETRSIMRSLLEAVSFL---HANNIVHRDLKPENILLDDNMQIRLSD 243 (365)
T ss_dssp EEEBSSEEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTCCEEECC
T ss_pred EEeeCCEEEEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEECCCCCEEEEe
Confidence 9999999999999999999999987643 689999999999999999999 788999999999999999999999999
Q ss_pred cccccccCCcCcccccccccccccccccccCc------CCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhcc
Q 002214 808 FGIAKLLSEEDSMKQTQTLATIGYIAPEYGRE------GQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWIND 881 (952)
Q Consensus 808 fgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~ 881 (952)
||++........ .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ....
T Consensus 244 fG~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~--~~~~----- 314 (365)
T 2y7j_A 244 FGFSCHLEPGEK--LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ--ILML----- 314 (365)
T ss_dssp CTTCEECCTTCC--BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HHHH-----
T ss_pred cCcccccCCCcc--cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH--HHHH-----
Confidence 999987654332 234579999999998753 3588899999999999999999999865211 0000
Q ss_pred chhhhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 882 SLPAVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
..+......... ..+..++.++.+++.+||+.||++|||+.|++++
T Consensus 315 -----~~i~~~~~~~~~-----~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 315 -----RMIMEGQYQFSS-----PEWDDRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp -----HHHHHTCCCCCH-----HHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred -----HHHHhCCCCCCC-----cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 000000000000 1123456789999999999999999999999874
No 211
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=2.2e-38 Score=377.00 Aligned_cols=251 Identities=24% Similarity=0.384 Sum_probs=202.2
Q ss_pred ceecCccceEEEEEEe---CCCcEEEEEEeeccC--chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEEEccCC
Q 002214 670 NLIGIGSYGSVYKGRF---PDGIEVAIKVFHLQR--EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVLEYMPK 744 (952)
Q Consensus 670 ~~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 744 (952)
+.||+|+||.||+|.+ .+++.||||+++... ....+.+.+|++++++++|||||++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 4799999999999965 346889999997543 2345789999999999999999999999975 457899999999
Q ss_pred CChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcCcc--cc
Q 002214 745 GSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEEDSM--KQ 822 (952)
Q Consensus 745 g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~--~~ 822 (952)
|+|.+++.... .+++..+..++.||+.||+|| |++||+||||||+|||++.++.+||+|||+|+.+...... ..
T Consensus 454 g~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~yL---H~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 529 (635)
T 4fl3_A 454 GPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYL---EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 529 (635)
T ss_dssp EEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--------
T ss_pred CCHHHHHhhCC-CCCHHHHHHHHHHHHHHHHHH---HHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccc
Confidence 99999997544 689999999999999999999 7899999999999999999999999999999877543321 22
Q ss_pred cccccccccccccccCcCCcCcccchHhHHHHHHHHHh-CCCCCCccccCccchhhhhccchhhhhhhccccccchhhHH
Q 002214 823 TQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFT-GMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSEDEEH 901 (952)
Q Consensus 823 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 901 (952)
....+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+ ....+.....
T Consensus 530 ~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~-------------~~~~i~~~~~------ 590 (635)
T 4fl3_A 530 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE-------------VTAMLEKGER------ 590 (635)
T ss_dssp -----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-------------HHHHHHTTCC------
T ss_pred cCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-------------HHHHHHcCCC------
Confidence 23457889999999998899999999999999999998 999986532111 1111111100
Q ss_pred HHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHH
Q 002214 902 ANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLL 945 (952)
Q Consensus 902 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~ 945 (952)
...+..+++++.++|..||+.||++||++.+|++.|+++..++
T Consensus 591 -~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~l 633 (635)
T 4fl3_A 591 -MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV 633 (635)
T ss_dssp -CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred -CCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence 0123457888999999999999999999999999999987765
No 212
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.8e-38 Score=349.56 Aligned_cols=271 Identities=21% Similarity=0.310 Sum_probs=196.9
Q ss_pred HHHhccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccCc--hhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeE
Q 002214 660 LRATDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQRE--GALNSFDAECEILKTIRHRNLVKIISSCTNHNFKA 736 (952)
Q Consensus 660 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 736 (952)
....++|++.+.||+|+||+||+|++ .+++.||||+++.... ...+.+.+|+.++++++||||+++++++.+++..+
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (329)
T 3gbz_A 30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH 109 (329)
T ss_dssp --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence 34567899999999999999999987 4789999999865432 23456789999999999999999999999999999
Q ss_pred EEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeee-----CCCCcEEEeccccc
Q 002214 737 LVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLL-----DDSMVAHLSDFGIA 811 (952)
Q Consensus 737 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill-----~~~~~~kl~Dfgla 811 (952)
+||||++ |+|.+++.... .+++..+..++.|++.||+|| |++||+||||||+||++ +.++.+||+|||+|
T Consensus 110 lv~e~~~-~~L~~~~~~~~-~~~~~~~~~i~~ql~~~l~~L---H~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a 184 (329)
T 3gbz_A 110 LIFEYAE-NDLKKYMDKNP-DVSMRVIKSFLYQLINGVNFC---HSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLA 184 (329)
T ss_dssp EEEECCS-EEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHH
T ss_pred EEEecCC-CCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCEECCCCCHHHEEEecCCCCccceEEECcCCCc
Confidence 9999997 59999887654 689999999999999999999 78899999999999999 45566999999999
Q ss_pred cccCCcCcccccccccccccccccccCcC-CcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhcc---ch----
Q 002214 812 KLLSEEDSMKQTQTLATIGYIAPEYGREG-QVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWIND---SL---- 883 (952)
Q Consensus 812 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~---~~---- 883 (952)
+....... ......+|+.|+|||++.+. .++.++|||||||++|||++|+.||......+ ........ ..
T Consensus 185 ~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~ 262 (329)
T 3gbz_A 185 RAFGIPIR-QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEID-QLFKIFEVLGLPDDTTW 262 (329)
T ss_dssp HHHC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCTTTS
T ss_pred cccCCccc-ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHH-HHHHHHHHhCCCchhhh
Confidence 87643322 22345689999999988764 58999999999999999999999986532111 11111000 00
Q ss_pred hhhhhh--ccccc-cchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 884 PAVMNI--MDTNL-LSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 884 ~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
+..... ..... ...........+..+++++.+++.+||+.||++|||+.|++++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 263 PGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp TTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 000000 00000 0000011122334467889999999999999999999999864
No 213
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=4.1e-38 Score=355.31 Aligned_cols=252 Identities=21% Similarity=0.274 Sum_probs=192.7
Q ss_pred hccCCcc-ceecCccceEEEEEEeC-CCcEEEEEEeeccCchhhHHHHHHHHHHHh-CCCCccceeeeEeec----CCee
Q 002214 663 TDQFSEE-NLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQREGALNSFDAECEILKT-IRHRNLVKIISSCTN----HNFK 735 (952)
Q Consensus 663 ~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~----~~~~ 735 (952)
.++|.+. +.||+|+||+||+|.+. +|+.||||++... ..+.+|+.++.+ .+||||+++++++.. .+..
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~ 134 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 134 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence 3456665 68999999999999884 6899999998522 456788888754 589999999998865 5678
Q ss_pred EEEEEccCCCChhHHhhhcC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCC---CCcEEEeccccc
Q 002214 736 ALVLEYMPKGSLEDCMYASN-FNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDD---SMVAHLSDFGIA 811 (952)
Q Consensus 736 ~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~---~~~~kl~Dfgla 811 (952)
|+||||+++|+|.+++.... ..+++..+..++.||+.||+|| |++||+||||||+||+++. ++.+||+|||+|
T Consensus 135 ~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a 211 (400)
T 1nxk_A 135 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL---HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 211 (400)
T ss_dssp EEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH---HHCCccccCcCcceEEEecCCCCccEEEEecccc
Confidence 99999999999999997653 3699999999999999999999 6899999999999999997 789999999999
Q ss_pred cccCCcCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhcc
Q 002214 812 KLLSEEDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMD 891 (952)
Q Consensus 812 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 891 (952)
+...... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||........... . .... ..
T Consensus 212 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~-~----~~~i---~~ 281 (400)
T 1nxk_A 212 KETTSHN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG-M----KTRI---RM 281 (400)
T ss_dssp EECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCS-H----HHHH---HH
T ss_pred cccCCCC--ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHH-H----HHHH---Hc
Confidence 8764322 22345789999999999999999999999999999999999999965332211000 0 0000 00
Q ss_pred ccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 892 TNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
....... .....++.++.+++.+||+.||++|||+.|++++
T Consensus 282 ~~~~~~~-----~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 282 GQYEFPN-----PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp TCCCCCT-----TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CcccCCC-----cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0000000 0113467789999999999999999999999986
No 214
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=2.6e-38 Score=342.79 Aligned_cols=250 Identities=19% Similarity=0.290 Sum_probs=207.0
Q ss_pred HhccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccC---chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEE
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQR---EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKAL 737 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 737 (952)
..++|.+.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 92 (294)
T 2rku_A 13 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 92 (294)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEE
Confidence 3467999999999999999999985 58899999986542 3345678899999999999999999999999999999
Q ss_pred EEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCc
Q 002214 738 VLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEE 817 (952)
Q Consensus 738 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 817 (952)
||||+++++|.+++.... .+++.++..++.|+++|++|| |++||+||||||+||+++.++.+||+|||++......
T Consensus 93 v~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 168 (294)
T 2rku_A 93 VLELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYL---HRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 168 (294)
T ss_dssp EEECCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCccccCCChHhEEEcCCCCEEEEeccCceecccC
Confidence 999999999999887644 689999999999999999999 7889999999999999999999999999999876432
Q ss_pred CcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccch
Q 002214 818 DSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSE 897 (952)
Q Consensus 818 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 897 (952)
.. ......+++.|+|||.+.+..++.++||||||+++|||++|+.||......+ ... .......
T Consensus 169 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~-----------~~~~~~~--- 232 (294)
T 2rku_A 169 GE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE-TYL-----------RIKKNEY--- 232 (294)
T ss_dssp TC-CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHH-----------HHHTTCC---
T ss_pred cc-ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHH-----------HHhhccC---
Confidence 22 2233568999999999998889999999999999999999999986532110 000 0000000
Q ss_pred hhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 898 DEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 898 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
..+..++.++.+++.+||+.||++|||+.|++++
T Consensus 233 ------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 233 ------SIPKHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp ------CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ------CCccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0123356779999999999999999999999875
No 215
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=4.9e-38 Score=362.67 Aligned_cols=195 Identities=24% Similarity=0.355 Sum_probs=155.1
Q ss_pred hccCCccceecCccceEEEEEEeC-CCcEEEEEEeecc--CchhhHHHHHHHHHHHhCCCCccceeeeEeecC-----Ce
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQ--REGALNSFDAECEILKTIRHRNLVKIISSCTNH-----NF 734 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 734 (952)
.++|++.+.||+|+||+||+|++. +|+.||||++... .....+++.+|++++++++||||+++++++... ..
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 468999999999999999999874 6899999998643 233457789999999999999999999998433 56
Q ss_pred eEEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEecccccccc
Q 002214 735 KALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLL 814 (952)
Q Consensus 735 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~ 814 (952)
.|+||||+ +|+|.+++... ..+++..+..++.||+.||+|| |++||+||||||+|||++.++.+||+|||+|+..
T Consensus 132 ~~lv~e~~-~~~L~~~~~~~-~~l~~~~~~~~~~qi~~aL~~L---H~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFRTP-VYLTELHIKTLLYNLLVGVKYV---HSAGILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp EEEEECCC-SEEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred EEEEEecc-ccchhhhcccC-CCCCHHHHHHHHHHHHHHHHHH---HhCCcCCCCCChhhEEECCCCCEeecccccchhc
Confidence 89999998 57898888654 3699999999999999999999 7889999999999999999999999999999876
Q ss_pred CCcCc--------------------------cccccccccccccccccc-CcCCcCcccchHhHHHHHHHHHhCC
Q 002214 815 SEEDS--------------------------MKQTQTLATIGYIAPEYG-REGQVSIKGDVYNYGIMLMEVFTGM 862 (952)
Q Consensus 815 ~~~~~--------------------------~~~~~~~~~~~y~aPE~~-~~~~~~~~~Dv~slG~~l~el~tg~ 862 (952)
..... ......+||+.|+|||++ ....++.++|||||||++|||++|.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~ 281 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMI 281 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTS
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhc
Confidence 43221 112335789999999975 5667999999999999999999943
No 216
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=5e-38 Score=342.30 Aligned_cols=252 Identities=22% Similarity=0.318 Sum_probs=203.7
Q ss_pred HhccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEEE
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVLE 740 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 740 (952)
..++|.+.+.||+|+||.||+|+.. +|+.||+|+++.......+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQ 86 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEE
Confidence 3467999999999999999999984 799999999976554445678899999999999999999999999999999999
Q ss_pred ccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeee---CCCCcEEEeccccccccCCc
Q 002214 741 YMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLL---DDSMVAHLSDFGIAKLLSEE 817 (952)
Q Consensus 741 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill---~~~~~~kl~Dfgla~~~~~~ 817 (952)
|+++++|.+++...+ .+++..+..++.|++.||+|| |++||+||||||+||++ +.++.+||+|||+++.....
T Consensus 87 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 162 (304)
T 2jam_A 87 LVSGGELFDRILERG-VYTEKDASLVIQQVLSAVKYL---HENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG 162 (304)
T ss_dssp CCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHH---HHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB
T ss_pred cCCCccHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC
Confidence 999999999887654 689999999999999999999 78899999999999999 78899999999999764332
Q ss_pred CcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccch
Q 002214 818 DSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSE 897 (952)
Q Consensus 818 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 897 (952)
......|++.|+|||.+.+..++.++||||+|+++|||++|+.||....... ..... ........
T Consensus 163 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~i-----------~~~~~~~~ 227 (304)
T 2jam_A 163 ---IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESK-LFEKI-----------KEGYYEFE 227 (304)
T ss_dssp ---TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHH-----------HHCCCCCC
T ss_pred ---ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHH-----------HcCCCCCC
Confidence 1223468999999999999899999999999999999999999986521110 00000 00000000
Q ss_pred hhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 898 DEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 898 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
...+..+++++.+++.+||..||++|||+.|++++
T Consensus 228 -----~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 228 -----SPFWDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp -----TTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred -----ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 00123457789999999999999999999999874
No 217
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=5.4e-38 Score=347.62 Aligned_cols=256 Identities=21% Similarity=0.256 Sum_probs=192.3
Q ss_pred hccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccCchhhHHHHHHHHHHHhCC-CCccceeeeEee--------cC
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQREGALNSFDAECEILKTIR-HRNLVKIISSCT--------NH 732 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~--------~~ 732 (952)
..+|++.+.||+|+||.||+|++ .+++.||||++........+.+.+|+.+++++. ||||+++++++. ..
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 45899999999999999999997 478999999987666666678899999999996 999999999983 34
Q ss_pred CeeEEEEEccCCCChhHHhhh--cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeCCCCCCCeeeCCCCcEEEecc
Q 002214 733 NFKALVLEYMPKGSLEDCMYA--SNFNLDIFQRLGIMIDVASALEYLHFGHSNP--IVHCDIKPSNVLLDDSMVAHLSDF 808 (952)
Q Consensus 733 ~~~~lv~e~~~~g~L~~~l~~--~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~--ivH~Dlk~~Nill~~~~~~kl~Df 808 (952)
...++||||++ |+|.+++.. ....+++.+++.++.|++.||+|| |+.| |+||||||+||+++.++.+||+||
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~L---H~~~~~ivH~Dikp~NIl~~~~~~~kl~Df 182 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHM---HRQKPPIIHRDLKVENLLLSNQGTIKLCDF 182 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHH---HTSSSCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH---HhCCCCEEEccCCcccEEECCCCCEEEecC
Confidence 46799999995 789888865 344699999999999999999999 6778 999999999999999999999999
Q ss_pred ccccccCCcCccc-----------cccccccccccccccc---CcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccc
Q 002214 809 GIAKLLSEEDSMK-----------QTQTLATIGYIAPEYG---REGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMS 874 (952)
Q Consensus 809 gla~~~~~~~~~~-----------~~~~~~~~~y~aPE~~---~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~ 874 (952)
|+++......... .....+|+.|+|||++ .+..++.++|||||||++|||++|+.||.......
T Consensus 183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-- 260 (337)
T 3ll6_A 183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR-- 260 (337)
T ss_dssp TTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------
T ss_pred ccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH--
Confidence 9998765432211 1134589999999988 56678999999999999999999999986421110
Q ss_pred hhhhhccchhhhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHH
Q 002214 875 IKRWINDSLPAVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLL 945 (952)
Q Consensus 875 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~ 945 (952)
... ...... .+..++..+.+++.+||+.||++|||+.|++++|+++....
T Consensus 261 ---~~~-----------~~~~~~-------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~ 310 (337)
T 3ll6_A 261 ---IVN-----------GKYSIP-------PHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR 310 (337)
T ss_dssp -------------------CCCC-------TTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred ---hhc-----------CcccCC-------cccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 000 000000 01223455889999999999999999999999999997754
No 218
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=3e-38 Score=365.46 Aligned_cols=253 Identities=22% Similarity=0.310 Sum_probs=206.1
Q ss_pred hccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccC---chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQR---EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALV 738 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 738 (952)
.++|.+.+.||+|+||.||+|+.. +|+.||+|++.... ......+.+|++++++++||||+++++++...+..|+|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 367999999999999999999984 69999999986442 23346788999999999999999999999999999999
Q ss_pred EEccCCCChhHHhhhcC---CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccC
Q 002214 739 LEYMPKGSLEDCMYASN---FNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLS 815 (952)
Q Consensus 739 ~e~~~~g~L~~~l~~~~---~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~ 815 (952)
|||++||+|.+++.... ..+++..+..++.||+.||+|| |++||+||||||+||+++.++.+||+|||+++...
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~L---H~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHL---HQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHH---HHcCCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 99999999999887543 3699999999999999999999 78999999999999999999999999999998765
Q ss_pred CcCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhcccccc
Q 002214 816 EEDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLL 895 (952)
Q Consensus 816 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 895 (952)
.... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....+.. .+.....
T Consensus 341 ~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~-~~~~~~~-------~i~~~~~- 410 (543)
T 3c4z_A 341 AGQT-KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKELKQ-------RVLEQAV- 410 (543)
T ss_dssp TTCC-CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC-CHHHHHH-------HHHHCCC-
T ss_pred CCCc-ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch-hHHHHHH-------HHhhccc-
Confidence 4322 2233579999999999999999999999999999999999999996532111 1111100 0010000
Q ss_pred chhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCH-----HHHHH
Q 002214 896 SEDEEHANVAKQSCASSVLSLAMECTSESPENRVNT-----KEIIS 936 (952)
Q Consensus 896 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~ev~~ 936 (952)
..+..++.++.+++.+||..||++||++ .|+.+
T Consensus 411 --------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 411 --------TYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp --------CCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred --------CCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 0123457789999999999999999975 66654
No 219
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=7.4e-38 Score=341.40 Aligned_cols=276 Identities=29% Similarity=0.488 Sum_probs=205.5
Q ss_pred CCCCccccccCCCCCCCC--CceEEEeCCC--CeEEEEEecCCCCcc--cCCccccCCcccCeeeccc-cccccccCCCc
Q 002214 5 NPNNILAQNWTSNASVCS--WMGITCDVYG--NRVTSLTISDLGLAG--TIPSHLGNLSSLQTLVLSR-NWFSGTIPKEI 77 (952)
Q Consensus 5 ~~~~~~~~~~~~~~~~c~--w~~v~c~~~~--~~~~~l~l~~~~~~~--~~p~~l~~l~~L~~L~L~~-n~l~~~~p~~l 77 (952)
||. .++ +|..++|||. |.||+|+... .+|++|+++++++++ .+|+.++++++|++|+|++ |.+.+.+|..|
T Consensus 20 ~~~-~l~-~W~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l 97 (313)
T 1ogq_A 20 NPT-TLS-SWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAI 97 (313)
T ss_dssp CCG-GGT-TCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGG
T ss_pred Ccc-ccc-CCCCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhH
Confidence 565 454 7877789999 9999998654 799999999999999 8999999999999999995 99999999999
Q ss_pred CCcCCCcEEeCcCCcccccCChhhcCCCCCCeEeecCccCccccCcccccccccccceeeccccccccCCCCCCCCCCcc
Q 002214 78 GNLTKLKELHLDYNKLQGEIPEELGNLAELEMLVLNNNLLTGTIPASIFNLSFISTALDFSDNSLTGSFPYDMCPGLPRL 157 (952)
Q Consensus 78 ~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~l~~~L~l~~n~l~~~~~~~~~~~l~~L 157 (952)
+.+++|++|+|++|++.+.+|..|+++++|++|+|++|.+++.+|..+.++..+ +.|++++|++++.+|..+..-.++|
T Consensus 98 ~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L-~~L~L~~N~l~~~~p~~l~~l~~~L 176 (313)
T 1ogq_A 98 AKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNL-VGITFDGNRISGAIPDSYGSFSKLF 176 (313)
T ss_dssp GGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTC-CEEECCSSCCEEECCGGGGCCCTTC
T ss_pred hcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCC-CeEECcCCcccCcCCHHHhhhhhcC
Confidence 999999999999999999999999999999999999999998888888776654 6666666666666665543222266
Q ss_pred ceEEcccCcccccCCccccCCCCCcEEEccCCcccccCCccccccCCccEEEeeCCcCCccCchhhhccCCCcEeeeccc
Q 002214 158 KGLYVSYNQFKGPIPNNLWHCKELSSVSLSYNQFTGRLPRDLGNSTKLKSLDLGFNNLNGEIPQEIGNLRNLEILGIDQS 237 (952)
Q Consensus 158 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n 237 (952)
++|++++|++++.+|..+..+. |+.|+|++|++++..|..|+.+++|++|+|++|.+++.+|. +..+++|++|+|++|
T Consensus 177 ~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N 254 (313)
T 1ogq_A 177 TSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNN 254 (313)
T ss_dssp CEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSS
T ss_pred cEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCC
Confidence 6666666666666666666665 66666666666666666666666666666666666544443 556666666666666
Q ss_pred cccccCCccccCCCCccEEEeeCccccccCCCCcccCCCCCcceEEcccCc
Q 002214 238 NLVGFVPDTIFNISTLKILSLFNNTLSGNLPSSKNLIGLPNLEGLNLGLNN 288 (952)
Q Consensus 238 ~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~L~~L~L~~N~ 288 (952)
++.+.+|..+..+++|++|+|++|++++.+|.. ..+++|+.|++++|+
T Consensus 255 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~---~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 255 RIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG---GNLQRFDVSAYANNK 302 (313)
T ss_dssp CCEECCCGGGGGCTTCCEEECCSSEEEEECCCS---TTGGGSCGGGTCSSS
T ss_pred cccCcCChHHhcCcCCCEEECcCCcccccCCCC---ccccccChHHhcCCC
Confidence 666666666666666666666666666555542 345555666666655
No 220
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-38 Score=352.74 Aligned_cols=271 Identities=23% Similarity=0.316 Sum_probs=200.8
Q ss_pred HHhccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccCc-----hhhHHHHHHHHHHHhCCCCccceeeeEeecCCe
Q 002214 661 RATDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQRE-----GALNSFDAECEILKTIRHRNLVKIISSCTNHNF 734 (952)
Q Consensus 661 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 734 (952)
...++|.+.+.||+|+||.||+|++. +|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 34578999999999999999999984 689999999864322 123568899999999999999999999999999
Q ss_pred eEEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEecccccccc
Q 002214 735 KALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLL 814 (952)
Q Consensus 735 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~ 814 (952)
.++||||+++ +|.+++......+++..+..++.|+++||+|| |++||+||||||+||+++.++.+||+|||+|+..
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYL---HQHWILHRDLKPNNLLLDENGVLKLADFGLAKSF 162 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred eEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHH---HHCCEECCCCCHHHEEEcCCCCEEEEecccceec
Confidence 9999999976 89888887766789999999999999999999 7899999999999999999999999999999876
Q ss_pred CCcCcccccccccccccccccccCcC-CcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhcc---ch----hhh
Q 002214 815 SEEDSMKQTQTLATIGYIAPEYGREG-QVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWIND---SL----PAV 886 (952)
Q Consensus 815 ~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~---~~----~~~ 886 (952)
.... .......+|+.|+|||++.+. .++.++|||||||++|||++|..||......+ .+.+.... .. +..
T Consensus 163 ~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~ 240 (346)
T 1ua2_A 163 GSPN-RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD-QLTRIFETLGTPTEEQWPDM 240 (346)
T ss_dssp TSCC-CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCTTTSSST
T ss_pred cCCc-ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHcCCCChhhhhhh
Confidence 4332 223345789999999988654 58899999999999999999999986532111 11111110 00 000
Q ss_pred hhhccccccchhh-HHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 887 MNIMDTNLLSEDE-EHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 887 ~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
....+.......+ .........+++++.+++.+||+.||++|||+.|++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 241 CSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp TSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0000000000000 00011124457889999999999999999999999875
No 221
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.2e-38 Score=351.38 Aligned_cols=264 Identities=21% Similarity=0.282 Sum_probs=197.1
Q ss_pred hccCCccceecCccceEEEEEEe-CCCcEEEEEEeecc--CchhhHHHHHHHHHHHhCCCCccceeeeEeecCC------
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQ--REGALNSFDAECEILKTIRHRNLVKIISSCTNHN------ 733 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 733 (952)
.++|++.+.||+|+||.||+|.+ .+|+.||||++... .....+++.+|++++++++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 46799999999999999999998 57999999998543 2334567899999999999999999999997653
Q ss_pred eeEEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccc
Q 002214 734 FKALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKL 813 (952)
Q Consensus 734 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~ 813 (952)
..|+||||+ +++|.+++... .+++..+..++.|+++||+|| |++||+||||||+||+++.++.+||+|||+|+.
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~qi~~~L~~L---H~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 177 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYI---HAAGIIHRDLKPGNLAVNEDCELKILDFGLARQ 177 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHH---HHCCccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence 459999999 88999988763 589999999999999999999 789999999999999999999999999999987
Q ss_pred cCCcCcccccccccccccccccccCc-CCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhh---ccchhhhhhh
Q 002214 814 LSEEDSMKQTQTLATIGYIAPEYGRE-GQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWI---NDSLPAVMNI 889 (952)
Q Consensus 814 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~---~~~~~~~~~~ 889 (952)
.... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||......+ .+.... .....+....
T Consensus 178 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~l~~i~~~~g~~~~~~~~~ 252 (367)
T 1cm8_A 178 ADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD-QLKEIMKVTGTPPAEFVQR 252 (367)
T ss_dssp CCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHHT
T ss_pred cccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHHH
Confidence 5432 234578999999998876 678999999999999999999999986532111 111111 0000111000
Q ss_pred ccc--------cccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 890 MDT--------NLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 890 ~~~--------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
+.. .+..............+++++.+++.+||..||++|||+.|++++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 253 LQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp CSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred hhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 000 000000000001123457789999999999999999999999884
No 222
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=2.9e-38 Score=348.91 Aligned_cols=249 Identities=19% Similarity=0.295 Sum_probs=206.5
Q ss_pred hccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccC---chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQR---EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALV 738 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 738 (952)
.++|.+.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 467999999999999999999984 58899999986542 33456788999999999999999999999999999999
Q ss_pred EEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcC
Q 002214 739 LEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEED 818 (952)
Q Consensus 739 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 818 (952)
|||+++++|.+++.... .+++.++..++.|+++||+|| |++||+||||||+||+++.++.+||+|||+++......
T Consensus 120 ~e~~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~L---H~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 195 (335)
T 2owb_A 120 LELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYL---HRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195 (335)
T ss_dssp ECCCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EecCCCCCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHH---HHCCCEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence 99999999999887643 689999999999999999999 78899999999999999999999999999998764332
Q ss_pred cccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccchh
Q 002214 819 SMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSED 898 (952)
Q Consensus 819 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 898 (952)
. ......|++.|+|||++.+..++.++||||||+++|||++|+.||......+ .+.. ......
T Consensus 196 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~-----------~~~~~~---- 258 (335)
T 2owb_A 196 E-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE-TYLR-----------IKKNEY---- 258 (335)
T ss_dssp C-CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHH-----------HHHTCC----
T ss_pred c-cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHH-HHHH-----------HhcCCC----
Confidence 2 2234568999999999988889999999999999999999999986521110 0000 000000
Q ss_pred hHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 899 EEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 899 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
..+..++.++.+++.+||+.||++||++.|++++
T Consensus 259 -----~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 259 -----SIPKHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp -----CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred -----CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0123456778999999999999999999999874
No 223
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=7.1e-38 Score=342.93 Aligned_cols=253 Identities=26% Similarity=0.363 Sum_probs=202.9
Q ss_pred HHhccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEE
Q 002214 661 RATDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVL 739 (952)
Q Consensus 661 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 739 (952)
...++|.+.+.||+|+||.||+|.+. +|+.||||++.... ..+.+.+|+.++++++||||+++++++...+..++||
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 103 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVM 103 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEe
Confidence 34568999999999999999999885 58999999987543 2467899999999999999999999999999999999
Q ss_pred EccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcCc
Q 002214 740 EYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEEDS 819 (952)
Q Consensus 740 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 819 (952)
||+++++|.+++......+++..+..++.|++.||+|| |+.||+||||||+||+++.++.+||+|||++.......
T Consensus 104 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~- 179 (314)
T 3com_A 104 EYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYL---HFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM- 179 (314)
T ss_dssp ECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB-
T ss_pred ecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc-
Confidence 99999999999986666899999999999999999999 78999999999999999999999999999998764322
Q ss_pred ccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccchhh
Q 002214 820 MKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSEDE 899 (952)
Q Consensus 820 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 899 (952)
.......+++.|+|||.+.+..++.++||||||+++|+|++|+.||....... ... ..........
T Consensus 180 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~~-----~~~~~~~~~~----- 245 (314)
T 3com_A 180 AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR----AIF-----MIPTNPPPTF----- 245 (314)
T ss_dssp SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH----HHH-----HHHHSCCCCC-----
T ss_pred cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHH----HHH-----HHhcCCCccc-----
Confidence 22234568999999999998899999999999999999999999986532110 000 0000000000
Q ss_pred HHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 900 EHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 900 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
..+..++.++.+++.+||+.||++|||+.|++++
T Consensus 246 ----~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 246 ----RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp ----SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ----CCcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 0123457789999999999999999999999874
No 224
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=3.2e-38 Score=341.23 Aligned_cols=245 Identities=22% Similarity=0.277 Sum_probs=200.4
Q ss_pred HhccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccC--chhhHHHHHHHHHHHhC-CCCccceeeeEeecCCeeEE
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQR--EGALNSFDAECEILKTI-RHRNLVKIISSCTNHNFKAL 737 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 737 (952)
..++|++.+.||+|+||+||+|++. +++.||||++.... ......+.+|+..+.++ +||||+++++++.+++..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 4578999999999999999999985 79999999987542 33456788999999999 99999999999999999999
Q ss_pred EEEccCCCChhHHhhhcC---CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCC--------------
Q 002214 738 VLEYMPKGSLEDCMYASN---FNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDS-------------- 800 (952)
Q Consensus 738 v~e~~~~g~L~~~l~~~~---~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~-------------- 800 (952)
||||+++++|.+++.... ..+++..+..++.|+++||+|| |++||+||||||+||+++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~l---H~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI---HSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEC----------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHH---HhCCEeecCCCHHHEEEcCCCCCccccccccccc
Confidence 999999999999987642 4689999999999999999999 78999999999999999844
Q ss_pred -----CcEEEeccccccccCCcCcccccccccccccccccccCcC-CcCcccchHhHHHHHHHHHhCCCCCCccccCccc
Q 002214 801 -----MVAHLSDFGIAKLLSEEDSMKQTQTLATIGYIAPEYGREG-QVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMS 874 (952)
Q Consensus 801 -----~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~ 874 (952)
..+||+|||.+....... ...+|+.|+|||.+.+. .++.++|||||||++|||++|..|+... ..
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----~~ 236 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG----DQ 236 (289)
T ss_dssp ----CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS----HH
T ss_pred ccCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch----hH
Confidence 479999999998764332 23589999999998765 5668999999999999999998775331 11
Q ss_pred hhhhhccchhhhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 875 IKRWINDSLPAVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 875 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
.........+ ..+..+++++.+++.+||+.||++|||+.|++++
T Consensus 237 ~~~~~~~~~~-------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 237 WHEIRQGRLP-------------------RIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp HHHHHTTCCC-------------------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred HHHHHcCCCC-------------------CCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 1111111000 0123457789999999999999999999999864
No 225
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=5e-38 Score=340.89 Aligned_cols=251 Identities=25% Similarity=0.398 Sum_probs=199.9
Q ss_pred cCCccceecCccceEEEEEEe-CCCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEEEccC
Q 002214 665 QFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVLEYMP 743 (952)
Q Consensus 665 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 743 (952)
+|.....||+|+||.||+|.+ .+++.||||.+........+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 102 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP 102 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence 455556999999999999997 5689999999977666666789999999999999999999999999999999999999
Q ss_pred CCChhHHhhhcCC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCC-CCcEEEeccccccccCCcCcc
Q 002214 744 KGSLEDCMYASNF--NLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDD-SMVAHLSDFGIAKLLSEEDSM 820 (952)
Q Consensus 744 ~g~L~~~l~~~~~--~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~-~~~~kl~Dfgla~~~~~~~~~ 820 (952)
+++|.+++..... .+++..+..++.|++.||+|| |++||+||||||+||+++. ++.+||+|||++........
T Consensus 103 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~- 178 (295)
T 2clq_A 103 GGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYL---HDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP- 178 (295)
T ss_dssp EEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC----
T ss_pred CCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHH---HhCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCC-
Confidence 9999999976533 467889999999999999999 7889999999999999987 89999999999987643222
Q ss_pred cccccccccccccccccCcCC--cCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccchh
Q 002214 821 KQTQTLATIGYIAPEYGREGQ--VSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSED 898 (952)
Q Consensus 821 ~~~~~~~~~~y~aPE~~~~~~--~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 898 (952)
......|++.|+|||++.+.. ++.++||||||+++|||++|+.||............ .......
T Consensus 179 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~-------~~~~~~~------- 244 (295)
T 2clq_A 179 CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFK-------VGMFKVH------- 244 (295)
T ss_dssp --CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHH-------HHHHCCC-------
T ss_pred cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHh-------hcccccc-------
Confidence 223356899999999887643 789999999999999999999998653211100000 0000000
Q ss_pred hHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 899 EEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 899 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
...+..+++++.+++.+||+.||++||++.|++++
T Consensus 245 ----~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 245 ----PEIPESMSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp ----CCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred ----ccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 01123457789999999999999999999999863
No 226
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1.7e-38 Score=343.89 Aligned_cols=259 Identities=23% Similarity=0.388 Sum_probs=200.0
Q ss_pred hccCCccceecCccceEEEEEEeC--CCc--EEEEEEeecc---CchhhHHHHHHHHHHHhCCCCccceeeeEeecCCee
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP--DGI--EVAIKVFHLQ---REGALNSFDAECEILKTIRHRNLVKIISSCTNHNFK 735 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~--~~~--~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 735 (952)
.++|++.+.||+|+||+||+|++. +++ .||||+++.. .....+.+.+|++++++++||||+++++++..+. .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 457999999999999999999852 333 6899988654 2344578899999999999999999999998765 7
Q ss_pred EEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccC
Q 002214 736 ALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLS 815 (952)
Q Consensus 736 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~ 815 (952)
++||||+++++|.+++......+++..+..++.|+++||+|| |++||+||||||+||+++.++.+||+|||+++...
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 172 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL---ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP 172 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred eeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHH---HhCCcccCCCchheEEEcCCCCEEEcccccccccc
Confidence 899999999999999987666799999999999999999999 78899999999999999999999999999998765
Q ss_pred CcCcc--cccccccccccccccccCcCCcCcccchHhHHHHHHHHHh-CCCCCCccccCccchhhhhccchhhhhhhccc
Q 002214 816 EEDSM--KQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFT-GMKPTNEFFTGEMSIKRWINDSLPAVMNIMDT 892 (952)
Q Consensus 816 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 892 (952)
..... ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...... ... ......
T Consensus 173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~-------~~~~~~ 240 (291)
T 1u46_A 173 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS-----QIL-------HKIDKE 240 (291)
T ss_dssp C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHH-------HHHHTS
T ss_pred ccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH-----HHH-------HHHHcc
Confidence 43322 1223457889999999988889999999999999999999 99998653211 000 000000
Q ss_pred cccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 002214 893 NLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDL 944 (952)
Q Consensus 893 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~ 944 (952)
.... ..+..++.++.+++.+||+.||++|||+.+++++|+++...
T Consensus 241 ~~~~-------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 241 GERL-------PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp CCCC-------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred CCCC-------CCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 0000 01234677899999999999999999999999999987543
No 227
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=4.6e-38 Score=375.63 Aligned_cols=260 Identities=24% Similarity=0.395 Sum_probs=210.0
Q ss_pred HhccCCccceecCccceEEEEEEeC----CCcEEEEEEeeccC-chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeE
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRFP----DGIEVAIKVFHLQR-EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKA 736 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 736 (952)
..++|.+.+.||+|+||.||+|.+. .+..||||+++... ....+.+.+|+.++++++||||+++++++.+ +..+
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~~ 466 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVW 466 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-CceE
Confidence 4568999999999999999999873 25679999986543 3345678999999999999999999999854 5689
Q ss_pred EEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCC
Q 002214 737 LVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSE 816 (952)
Q Consensus 737 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~ 816 (952)
+||||+++|+|.+++......+++..+..++.|+++||+|| |++||+||||||+||+++.++.+||+|||+|+....
T Consensus 467 lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~ 543 (656)
T 2j0j_A 467 IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYL---ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 543 (656)
T ss_dssp EEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC
T ss_pred EEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH---HhCCccccccchHhEEEeCCCCEEEEecCCCeecCC
Confidence 99999999999999987776799999999999999999999 788999999999999999999999999999987755
Q ss_pred cCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHh-CCCCCCccccCccchhhhhccchhhhhhhcccccc
Q 002214 817 EDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFT-GMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLL 895 (952)
Q Consensus 817 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 895 (952)
..........+|+.|+|||++.+..++.++|||||||++|||++ |..||......+ ... .+.....
T Consensus 544 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~--~~~----------~i~~~~~- 610 (656)
T 2j0j_A 544 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND--VIG----------RIENGER- 610 (656)
T ss_dssp ----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHH----------HHHHTCC-
T ss_pred CcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHH--HHH----------HHHcCCC-
Confidence 44433344567889999999988899999999999999999997 999986532111 000 0000000
Q ss_pred chhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHH
Q 002214 896 SEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLL 945 (952)
Q Consensus 896 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~ 945 (952)
...+..+++++.+++.+||+.||++|||+.|+++.|+++.+.-
T Consensus 611 -------~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~~ 653 (656)
T 2j0j_A 611 -------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 653 (656)
T ss_dssp -------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -------CCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 0123456788999999999999999999999999999997664
No 228
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=3.8e-38 Score=338.25 Aligned_cols=248 Identities=24% Similarity=0.422 Sum_probs=197.5
Q ss_pred hccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccC---chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQR---EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALV 738 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 738 (952)
.++|.+.+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|+.++++++||||+++++++...+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 467999999999999999999985 79999999986542 22346789999999999999999999999999999999
Q ss_pred EEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcC
Q 002214 739 LEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEED 818 (952)
Q Consensus 739 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 818 (952)
|||+++++|.+++.... .+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||++.......
T Consensus 90 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 165 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYC---HRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165 (276)
T ss_dssp EECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHH---HHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred EeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHH---HHCCCccCCCChhhEEECCCCCEEEeecccccccCCCc
Confidence 99999999999987654 689999999999999999999 78899999999999999999999999999998765432
Q ss_pred cccccccccccccccccccCcCCc-CcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccch
Q 002214 819 SMKQTQTLATIGYIAPEYGREGQV-SIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSE 897 (952)
Q Consensus 819 ~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 897 (952)
. .....+++.|+|||.+.+..+ +.++||||||+++|+|++|+.||..... ... ...+.....
T Consensus 166 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----~~~--------~~~~~~~~~-- 228 (276)
T 2h6d_A 166 F--LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV-----PTL--------FKKIRGGVF-- 228 (276)
T ss_dssp -------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHH--------HHHHHHCCC--
T ss_pred c--eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH-----HHH--------HHHhhcCcc--
Confidence 2 223568999999999887765 6899999999999999999999865211 000 000000000
Q ss_pred hhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 898 DEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 898 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
..+..++.++.+++.+||+.||++|||+.|++++
T Consensus 229 ------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 229 ------YIPEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp ------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ------cCchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0123356779999999999999999999999875
No 229
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=4.8e-38 Score=342.34 Aligned_cols=250 Identities=27% Similarity=0.410 Sum_probs=207.2
Q ss_pred hccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccC-chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEEE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQR-EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVLE 740 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 740 (952)
.+.|.+.+.||+|+||.||+|++ .+++.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 35699999999999999999987 468999999987553 3345789999999999999999999999999999999999
Q ss_pred ccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcCcc
Q 002214 741 YMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEEDSM 820 (952)
Q Consensus 741 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 820 (952)
|+++++|.+++... .+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||++....... .
T Consensus 101 ~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~-~ 174 (303)
T 3a7i_A 101 YLGGGSALDLLEPG--PLDETQIATILREILKGLDYL---HSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-I 174 (303)
T ss_dssp CCTTEEHHHHHTTS--CCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB-C
T ss_pred eCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHH---HHCCCccCCCChheEEECCCCCEEEeecccceecCccc-c
Confidence 99999999988653 589999999999999999999 78899999999999999999999999999998764332 2
Q ss_pred cccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccchhhH
Q 002214 821 KQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSEDEE 900 (952)
Q Consensus 821 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 900 (952)
......+++.|+|||++.+..++.++||||||+++|||++|+.||....... ....+ .. ...
T Consensus 175 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~-------~~----~~~----- 236 (303)
T 3a7i_A 175 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK--VLFLI-------PK----NNP----- 236 (303)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHH-------HH----SCC-----
T ss_pred ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHH--HHHHh-------hc----CCC-----
Confidence 2334568999999999998899999999999999999999999986532110 00000 00 000
Q ss_pred HHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 002214 901 HANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRL 938 (952)
Q Consensus 901 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L 938 (952)
...+..++.++.+++.+||+.||++|||+.|++++.
T Consensus 237 --~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 237 --PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp --CCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred --CCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 001224567799999999999999999999998763
No 230
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=2.2e-38 Score=355.06 Aligned_cols=264 Identities=13% Similarity=0.123 Sum_probs=190.1
Q ss_pred hccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccCc---hhhHHHHHHHHHHHhC--CCCccceee-------eEe
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQRE---GALNSFDAECEILKTI--RHRNLVKII-------SSC 729 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l--~h~niv~l~-------~~~ 729 (952)
...|.+.+.||+|+||+||+|++. +|+.||||++..... ...+.+.+|+.+++.+ +|||+++++ +++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 345899999999999999999974 789999999976542 3345677886555544 699987754 444
Q ss_pred ecC-----------------CeeEEEEEccCCCChhHHhhhcCCCCCHHHH------HHHHHHHHHHHHHHHhcCCCCeE
Q 002214 730 TNH-----------------NFKALVLEYMPKGSLEDCMYASNFNLDIFQR------LGIMIDVASALEYLHFGHSNPIV 786 (952)
Q Consensus 730 ~~~-----------------~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~------~~i~~~ia~~l~~Lh~~h~~~iv 786 (952)
..+ ...++||||++ |+|.+++...+..+++..+ ..++.|+++||+|| |++||+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~L---H~~~iv 216 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANL---QSKGLV 216 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHH---HHTTEE
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHH---HHCCCc
Confidence 332 33799999998 8999999875444566666 78889999999999 789999
Q ss_pred eCCCCCCCeeeCCCCcEEEeccccccccCCcCcccccccccccccccccccCc--CCcCcccchHhHHHHHHHHHhCCCC
Q 002214 787 HCDIKPSNVLLDDSMVAHLSDFGIAKLLSEEDSMKQTQTLATIGYIAPEYGRE--GQVSIKGDVYNYGIMLMEVFTGMKP 864 (952)
Q Consensus 787 H~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~tg~~p 864 (952)
||||||+|||++.++.+||+|||+|+...... ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.|
T Consensus 217 HrDikp~NIll~~~~~~kL~DFG~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~P 292 (371)
T 3q60_A 217 HGHFTPDNLFIMPDGRLMLGDVSALWKVGTRG----PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLP 292 (371)
T ss_dssp ETTCSGGGEEECTTSCEEECCGGGEEETTCEE----EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCS
T ss_pred cCcCCHHHEEECCCCCEEEEecceeeecCCCc----cCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999998764321 13457799999999987 6789999999999999999999999
Q ss_pred CCccccCccchhhhhccchhhhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHH--HHHHHH
Q 002214 865 TNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIIS--RLIKIR 942 (952)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~--~L~~i~ 942 (952)
|......... .+....... ....... ......+++++.+++.+||+.||++|||+.|+++ .++++.
T Consensus 293 f~~~~~~~~~--~~~~~~~~~---~~~~~~~-------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~ 360 (371)
T 3q60_A 293 FGLVTPGIKG--SWKRPSLRV---PGTDSLA-------FGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQ 360 (371)
T ss_dssp TTBCCTTCTT--CCCBCCTTS---CCCCSCC-------CTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHHH
T ss_pred CCCcCccccc--chhhhhhhh---ccccccc-------hhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHHH
Confidence 9765332111 110000000 0000000 0011345778999999999999999999999986 455555
Q ss_pred HHHh
Q 002214 943 DLLF 946 (952)
Q Consensus 943 ~~~~ 946 (952)
+...
T Consensus 361 ~~~~ 364 (371)
T 3q60_A 361 NEIS 364 (371)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 5443
No 231
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=2.7e-38 Score=342.00 Aligned_cols=251 Identities=22% Similarity=0.287 Sum_probs=188.2
Q ss_pred hccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccCc--hhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQRE--GALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVL 739 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 739 (952)
.++|++.+.||+|+||+||+|++ .+|+.||||+++.... ...+.+.++...++.++||||+++++++.+++..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 46899999999999999999997 5799999999865432 22334455556678889999999999999999999999
Q ss_pred EccCCCChhHHhhh---cCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEeCCCCCCCeeeCCCCcEEEeccccccccC
Q 002214 740 EYMPKGSLEDCMYA---SNFNLDIFQRLGIMIDVASALEYLHFGHSN-PIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLS 815 (952)
Q Consensus 740 e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~-~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~ 815 (952)
||++ |+|.+++.. ....+++..+..++.|++.||+|| |++ ||+||||||+||+++.++.+||+|||+++...
T Consensus 86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHL---HSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp ECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH---HHHSCCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred ehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---hhcCCeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 9997 588777654 445799999999999999999999 676 99999999999999999999999999998764
Q ss_pred CcCccccccccccccccccccc----CcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhcc
Q 002214 816 EEDSMKQTQTLATIGYIAPEYG----REGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMD 891 (952)
Q Consensus 816 ~~~~~~~~~~~~~~~y~aPE~~----~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 891 (952)
... ......||+.|+|||++ .+..++.++||||+|+++|||++|+.||.............. .
T Consensus 162 ~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-----------~ 228 (290)
T 3fme_A 162 DDV--AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVV-----------E 228 (290)
T ss_dssp ----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHH-----------H
T ss_pred ccc--cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHh-----------c
Confidence 432 22334699999999985 566789999999999999999999999865322111111111 1
Q ss_pred ccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 892 TNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
...... .+..+++++.+++.+||+.||++|||+.|++++
T Consensus 229 ~~~~~~-------~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h 267 (290)
T 3fme_A 229 EPSPQL-------PADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 267 (290)
T ss_dssp SCCCCC-------CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred cCCCCc-------ccccCCHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence 110000 112356789999999999999999999999883
No 232
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.7e-37 Score=360.64 Aligned_cols=252 Identities=23% Similarity=0.346 Sum_probs=204.1
Q ss_pred HhccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccC--chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEE
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQR--EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALV 738 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 738 (952)
..++|++.+.||+|+||+||+|++. +++.||||++.... ......+.+|++++++++||||+++++++.+.+..++|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 3568999999999999999999984 78999999986432 23457789999999999999999999999999999999
Q ss_pred EEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeC---CCCcEEEeccccccccC
Q 002214 739 LEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLD---DSMVAHLSDFGIAKLLS 815 (952)
Q Consensus 739 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~---~~~~~kl~Dfgla~~~~ 815 (952)
|||+++|+|.+.+.... .+++..+..++.|++.||+|| |++||+||||||+||+++ .++.+||+|||+|+...
T Consensus 100 ~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~al~~l---H~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 175 (486)
T 3mwu_A 100 GELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYM---HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (486)
T ss_dssp ECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBC
T ss_pred EEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECC
Confidence 99999999999887654 689999999999999999999 789999999999999995 55679999999998764
Q ss_pred CcCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhcccccc
Q 002214 816 EEDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLL 895 (952)
Q Consensus 816 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 895 (952)
... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||......+ .... +......
T Consensus 176 ~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~-----------i~~~~~~ 240 (486)
T 3mwu_A 176 QNT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD-ILKR-----------VETGKYA 240 (486)
T ss_dssp CC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHH-----------HHHTCCC
T ss_pred CCC--ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHH-----------HHhCCCC
Confidence 432 2334579999999999875 58999999999999999999999986521110 0011 0000000
Q ss_pred chhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 896 SEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 896 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
... ..+..+++++.+++.+||+.||++|||+.|++++
T Consensus 241 ~~~-----~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 241 FDL-----PQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp SCS-----GGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred CCC-----cccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000 1123467789999999999999999999999875
No 233
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.7e-38 Score=345.97 Aligned_cols=264 Identities=23% Similarity=0.371 Sum_probs=188.3
Q ss_pred HHHhccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccC-chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEE
Q 002214 660 LRATDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQR-EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKAL 737 (952)
Q Consensus 660 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 737 (952)
....++|++.+.||+|+||.||+|.+ .+++.||||++.... ....+.+.+|+.++++++||||+++++++...+..++
T Consensus 11 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 90 (303)
T 2vwi_A 11 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWL 90 (303)
T ss_dssp --CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEE
T ss_pred ccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEE
Confidence 34567899999999999999999987 468999999886543 2345678899999999999999999999999999999
Q ss_pred EEEccCCCChhHHhhh-------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEecccc
Q 002214 738 VLEYMPKGSLEDCMYA-------SNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGI 810 (952)
Q Consensus 738 v~e~~~~g~L~~~l~~-------~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgl 810 (952)
||||+++++|.+++.. ....+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+
T Consensus 91 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~kl~dfg~ 167 (303)
T 2vwi_A 91 VMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYL---HKNGQIHRDVKAGNILLGEDGSVQIADFGV 167 (303)
T ss_dssp EEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCSGGGEEECTTCCEEECCCHH
T ss_pred EehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHH---HhCCCCCCCCChhhEEEcCCCCEEEEeccc
Confidence 9999999999998864 234689999999999999999999 788999999999999999999999999999
Q ss_pred ccccCCcCcc----cccccccccccccccccCc-CCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhh
Q 002214 811 AKLLSEEDSM----KQTQTLATIGYIAPEYGRE-GQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPA 885 (952)
Q Consensus 811 a~~~~~~~~~----~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 885 (952)
+......... ......||+.|+|||++.+ ..++.++||||||+++|||++|+.||.......... .......+.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-~~~~~~~~~ 246 (303)
T 2vwi_A 168 SAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLM-LTLQNDPPS 246 (303)
T ss_dssp HHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHH-HHHTSSCCC
T ss_pred hheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHH-HHhccCCCc
Confidence 9876533211 1223468999999998865 468899999999999999999999987632221110 000000000
Q ss_pred hhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 886 VMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 886 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
.. ... ........++.++.+++.+||+.||++||++.|++++
T Consensus 247 ~~--------~~~--~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 247 LE--------TGV--QDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp TT--------C-------CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred cc--------ccc--ccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 00 000 0000123456789999999999999999999999873
No 234
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=2.2e-37 Score=360.20 Aligned_cols=256 Identities=23% Similarity=0.372 Sum_probs=202.4
Q ss_pred hccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccC--chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQR--EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVL 739 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 739 (952)
.++|++.+.||+|+||+||+|++. +++.||+|+++... ......+.+|+.++++++||||+++++++.+.+..++||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 457999999999999999999985 68999999986543 233567899999999999999999999999999999999
Q ss_pred EccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCC---CCcEEEeccccccccCC
Q 002214 740 EYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDD---SMVAHLSDFGIAKLLSE 816 (952)
Q Consensus 740 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~---~~~~kl~Dfgla~~~~~ 816 (952)
||+++|+|.+.+.... .+++..+..++.|+++||+|| |++||+||||||+||+++. ++.+||+|||+|+....
T Consensus 116 e~~~~g~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~ 191 (494)
T 3lij_A 116 ECYKGGELFDEIIHRM-KFNEVDAAVIIKQVLSGVTYL---HKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN 191 (494)
T ss_dssp ECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBT
T ss_pred ecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCC
Confidence 9999999998886654 689999999999999999999 7899999999999999976 45599999999987643
Q ss_pred cCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccc
Q 002214 817 EDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLS 896 (952)
Q Consensus 817 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 896 (952)
.. ......||+.|+|||++. +.++.++||||+||++|+|++|..||......+ ..... .......
T Consensus 192 ~~--~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i-----------~~~~~~~ 256 (494)
T 3lij_A 192 QK--KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQE-ILRKV-----------EKGKYTF 256 (494)
T ss_dssp TB--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHH-----------HHTCCCC
T ss_pred Cc--cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHH-----------HhCCCCC
Confidence 32 233467999999999886 468999999999999999999999986532110 00100 0000000
Q ss_pred hhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH--HHHHH
Q 002214 897 EDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR--LIKIR 942 (952)
Q Consensus 897 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~--L~~i~ 942 (952)
.. .....+++++.+++.+||+.||++|||+.|++++ +++..
T Consensus 257 ~~-----~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~~ 299 (494)
T 3lij_A 257 DS-----PEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMC 299 (494)
T ss_dssp CS-----GGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHHH
T ss_pred Cc-----hhcccCCHHHHHHHHHHCCCChhhCccHHHHhcCcccccCc
Confidence 00 0123457789999999999999999999999975 44443
No 235
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=4.9e-38 Score=346.65 Aligned_cols=267 Identities=26% Similarity=0.364 Sum_probs=202.0
Q ss_pred hccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccCc--hhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQRE--GALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVL 739 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 739 (952)
.++|++.+.||+|+||.||+|++. +|+.||||++..... ...+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 468999999999999999999985 589999999865432 23456789999999999999999999999999999999
Q ss_pred EccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcCc
Q 002214 740 EYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEEDS 819 (952)
Q Consensus 740 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 819 (952)
||+++++|.++.... ..+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++.......
T Consensus 104 e~~~~~~l~~~~~~~-~~~~~~~~~~~~~qi~~~l~~L---H~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 179 (331)
T 4aaa_A 104 EFVDHTILDDLELFP-NGLDYQVVQKYLFQIINGIGFC---HSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 179 (331)
T ss_dssp ECCSEEHHHHHHHST-TCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred ecCCcchHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHH---HHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc
Confidence 999999888876543 3699999999999999999999 789999999999999999999999999999987644322
Q ss_pred ccccccccccccccccccCcC-CcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhh---ccchhhhhhh------
Q 002214 820 MKQTQTLATIGYIAPEYGREG-QVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWI---NDSLPAVMNI------ 889 (952)
Q Consensus 820 ~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~---~~~~~~~~~~------ 889 (952)
......+|+.|+|||++.+. .++.++||||+||++|||++|+.||......+. ..... ....+.....
T Consensus 180 -~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 257 (331)
T 4aaa_A 180 -VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQ-LYHIMMCLGNLIPRHQELFNKNPV 257 (331)
T ss_dssp -----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCSCCHHHHHHHHHCGG
T ss_pred -ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHHHhCCCChhhhhHhhhccc
Confidence 22345689999999988765 689999999999999999999999865322111 11110 0000110000
Q ss_pred ----ccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 890 ----MDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 890 ----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
..+...... ........+++++.+++.+||+.||++|||++|++++
T Consensus 258 ~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 258 FAGVRLPEIKERE--PLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp GTTCCCCCCSSCC--CHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred cccccCccccccc--hhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 000000000 0111223567889999999999999999999999875
No 236
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=4.6e-38 Score=351.31 Aligned_cols=266 Identities=22% Similarity=0.335 Sum_probs=204.7
Q ss_pred hccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccC-chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEEE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQR-EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVLE 740 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 740 (952)
.++|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 357999999999999999999985 68999999987653 3345678999999999999999999999999999999999
Q ss_pred ccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEeCCCCCCCeeeCCCCcEEEeccccccccCCcCc
Q 002214 741 YMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSN-PIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEEDS 819 (952)
Q Consensus 741 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~-~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 819 (952)
|+++++|.+++.... .+++..+..++.|++.||+|| |++ ||+||||||+||+++.++.+||+|||++......
T Consensus 112 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~l---h~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 185 (360)
T 3eqc_A 112 HMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYL---REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 185 (360)
T ss_dssp CCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH--
T ss_pred CCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccc--
Confidence 999999999997654 689999999999999999999 554 8999999999999999999999999999765322
Q ss_pred ccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhh--------------
Q 002214 820 MKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPA-------------- 885 (952)
Q Consensus 820 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-------------- 885 (952)
......||+.|+|||++.+..++.++|||||||++|||++|+.||......+ ...........
T Consensus 186 -~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (360)
T 3eqc_A 186 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE--LELMFGCQVEGDAAETPPRPRTPGR 262 (360)
T ss_dssp -C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHH--HHHHHC-------------------
T ss_pred -cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHhcccccccCCCCCCCcccCCC
Confidence 1233568999999999999999999999999999999999999986532111 00000000000
Q ss_pred hhhh--ccccccchhhHHH---------HHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 886 VMNI--MDTNLLSEDEEHA---------NVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 886 ~~~~--~~~~~~~~~~~~~---------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
.... .+........... ......++.++.+++.+||+.||++|||++|++++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 263 PLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp -----------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 0000 0000000000000 00112357789999999999999999999999876
No 237
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=8e-38 Score=352.00 Aligned_cols=273 Identities=21% Similarity=0.307 Sum_probs=203.4
Q ss_pred HHHhccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEeec-------
Q 002214 660 LRATDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSCTN------- 731 (952)
Q Consensus 660 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------- 731 (952)
....++|++.+.||+|+||+||+|++ .+|+.||||++...... ..+|+++++.++||||+++++++..
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~----~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY----KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS----CCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch----HHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 34567899999999999999999987 57999999998644322 2479999999999999999999843
Q ss_pred -------------------------------CCeeEEEEEccCCCChhHHhhh---cCCCCCHHHHHHHHHHHHHHHHHH
Q 002214 732 -------------------------------HNFKALVLEYMPKGSLEDCMYA---SNFNLDIFQRLGIMIDVASALEYL 777 (952)
Q Consensus 732 -------------------------------~~~~~lv~e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~L 777 (952)
....++||||++ |+|.+.+.. ....+++..+..++.|+++||+||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 334789999997 587777653 345799999999999999999999
Q ss_pred HhcCCCCeEeCCCCCCCeeeC-CCCcEEEeccccccccCCcCcccccccccccccccccccCcC-CcCcccchHhHHHHH
Q 002214 778 HFGHSNPIVHCDIKPSNVLLD-DSMVAHLSDFGIAKLLSEEDSMKQTQTLATIGYIAPEYGREG-QVSIKGDVYNYGIML 855 (952)
Q Consensus 778 h~~h~~~ivH~Dlk~~Nill~-~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l 855 (952)
|++||+||||||+||+++ .++.+||+|||+|+....... .....+|+.|+|||.+.+. .++.++||||+||++
T Consensus 158 ---H~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 232 (383)
T 3eb0_A 158 ---HSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP--SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVF 232 (383)
T ss_dssp ---HTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC--CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred ---HHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC--CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHH
Confidence 799999999999999997 689999999999987644332 2345689999999987764 489999999999999
Q ss_pred HHHHhCCCCCCccccCccchhhhh---ccchhhhhhhccccc------cchhhHHHHHhhhhhHHHHHHHHhhccccCCC
Q 002214 856 MEVFTGMKPTNEFFTGEMSIKRWI---NDSLPAVMNIMDTNL------LSEDEEHANVAKQSCASSVLSLAMECTSESPE 926 (952)
Q Consensus 856 ~el~tg~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~ 926 (952)
|||++|+.||......+ .+.+.+ .....+....+.... ...........+..+++++.+++.+||+.||+
T Consensus 233 ~ell~g~~pf~~~~~~~-~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 311 (383)
T 3eb0_A 233 GELILGKPLFSGETSID-QLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPD 311 (383)
T ss_dssp HHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGG
T ss_pred HHHHhCCCCCCCCChHH-HHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChh
Confidence 99999999986532111 111111 111111000000000 00011122334455788899999999999999
Q ss_pred CCCCHHHHHHH--HHHHHH
Q 002214 927 NRVNTKEIISR--LIKIRD 943 (952)
Q Consensus 927 ~RPs~~ev~~~--L~~i~~ 943 (952)
+|||+.|++++ ++++++
T Consensus 312 ~R~t~~e~l~hp~f~~~~~ 330 (383)
T 3eb0_A 312 LRINPYEAMAHPFFDHLRN 330 (383)
T ss_dssp GSCCHHHHHTSGGGHHHHH
T ss_pred hCCCHHHHhcCHHHHHHHh
Confidence 99999999864 566554
No 238
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=5.4e-38 Score=349.25 Aligned_cols=267 Identities=18% Similarity=0.261 Sum_probs=205.6
Q ss_pred hccCCccceecCccceEEEEEEeCCCcEEEEEEeeccCchh-----------------hHHHHHHHHHHHhCCCCcccee
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQREGA-----------------LNSFDAECEILKTIRHRNLVKI 725 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~E~~~l~~l~h~niv~l 725 (952)
.++|.+.+.||+|+||.||+|.. +|+.||||++....... .+.+.+|+.++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46899999999999999999999 99999999986442111 1789999999999999999999
Q ss_pred eeEeecCCeeEEEEEccCCCChhHH------hhhc-CCCCCHHHHHHHHHHHHHHHHHHHhcCC-CCeEeCCCCCCCeee
Q 002214 726 ISSCTNHNFKALVLEYMPKGSLEDC------MYAS-NFNLDIFQRLGIMIDVASALEYLHFGHS-NPIVHCDIKPSNVLL 797 (952)
Q Consensus 726 ~~~~~~~~~~~lv~e~~~~g~L~~~------l~~~-~~~l~~~~~~~i~~~ia~~l~~Lh~~h~-~~ivH~Dlk~~Nill 797 (952)
++++.+.+..++||||+++|+|.++ +... ...+++..+..++.|++.||+|| |+ +||+||||||+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~~i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYI---HNEKNICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHH---HHTSCEECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHH---hccCCEeecCCChHhEEE
Confidence 9999999999999999999999998 5542 45799999999999999999999 66 999999999999999
Q ss_pred CCCCcEEEeccccccccCCcCcccccccccccccccccccCcC-CcCc-ccchHhHHHHHHHHHhCCCCCCccccCccch
Q 002214 798 DDSMVAHLSDFGIAKLLSEEDSMKQTQTLATIGYIAPEYGREG-QVSI-KGDVYNYGIMLMEVFTGMKPTNEFFTGEMSI 875 (952)
Q Consensus 798 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~-~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~ 875 (952)
+.++.+||+|||.+...... ......+++.|+|||.+.+. .++. ++||||||+++|||++|+.||..........
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~ 262 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELF 262 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHH
T ss_pred cCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHH
Confidence 99999999999999876432 23345699999999998877 5665 9999999999999999999997543221111
Q ss_pred hhhhccchhhhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 876 KRWINDSLPAVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 876 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
........ ........................++.++.+++.+||+.||++|||+.|++++
T Consensus 263 ~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 263 NNIRTKNI-EYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp HHHTSCCC-CCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHhccCc-CCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 11111100 00000000000000000011124467889999999999999999999999874
No 239
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1e-37 Score=342.86 Aligned_cols=253 Identities=25% Similarity=0.321 Sum_probs=198.9
Q ss_pred HhccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccC--------chhhHHHHHHHHHHHhCCCCccceeeeEeecC
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQR--------EGALNSFDAECEILKTIRHRNLVKIISSCTNH 732 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 732 (952)
..++|.+.+.||+|+||.||+|++. +++.||||++.... ......+.+|++++++++||||+++++++..+
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 4568999999999999999999874 68999999986432 11234578999999999999999999998766
Q ss_pred CeeEEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCc---EEEeccc
Q 002214 733 NFKALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMV---AHLSDFG 809 (952)
Q Consensus 733 ~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~---~kl~Dfg 809 (952)
+ .++||||+++++|.+++.... .+++..+..++.|++.||+|| |++||+||||||+||+++.++. +||+|||
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg 162 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYL---HENGIIHRDLKPENVLLSSQEEDCLIKITDFG 162 (322)
T ss_dssp S-EEEEEECCTTEETHHHHSTTC-CCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEESSSSSSCCEEECCCT
T ss_pred c-eEEEEecCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCCHHHEEEecCCCCCeEEEccCc
Confidence 5 799999999999999886543 689999999999999999999 7899999999999999987664 9999999
Q ss_pred cccccCCcCcccccccccccccccccccC---cCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhh
Q 002214 810 IAKLLSEEDSMKQTQTLATIGYIAPEYGR---EGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAV 886 (952)
Q Consensus 810 la~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 886 (952)
+++...... ......||+.|+|||++. ...++.++|||||||++|||++|..||................
T Consensus 163 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~----- 235 (322)
T 2ycf_A 163 HSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG----- 235 (322)
T ss_dssp TCEECCCCH--HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHT-----
T ss_pred cceeccccc--ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhC-----
Confidence 998764322 122346899999999863 5678899999999999999999999997533221111111000
Q ss_pred hhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 887 MNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 887 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
.... ....+..+++++.+++.+||+.||++||++.|++++
T Consensus 236 -------~~~~----~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 236 -------KYNF----IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp -------CCCC----CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred -------cccc----CchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 0000 011123457789999999999999999999999864
No 240
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=4.4e-38 Score=348.61 Aligned_cols=252 Identities=22% Similarity=0.316 Sum_probs=199.6
Q ss_pred HhccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccC-chhhHHHHHHHHH-HHhCCCCccceeeeEeecCCeeEEE
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQR-EGALNSFDAECEI-LKTIRHRNLVKIISSCTNHNFKALV 738 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lv 738 (952)
..++|++.+.||+|+||.||+|++ .+|+.||||+++... ......+..|..+ ++.++||||+++++++.+++..++|
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 128 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 128 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEE
Confidence 346789999999999999999997 579999999986543 2334455566665 7778999999999999999999999
Q ss_pred EEccCCCChhHHhhh---cCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEeCCCCCCCeeeCCCCcEEEecccccccc
Q 002214 739 LEYMPKGSLEDCMYA---SNFNLDIFQRLGIMIDVASALEYLHFGHSN-PIVHCDIKPSNVLLDDSMVAHLSDFGIAKLL 814 (952)
Q Consensus 739 ~e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~-~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~ 814 (952)
|||+++ +|.+++.. ....+++..+..++.|++.||+|| |++ ||+||||||+||+++.++.+||+|||+++..
T Consensus 129 ~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~l---H~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 204 (340)
T 3an0_A 129 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHL---HSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 204 (340)
T ss_dssp ECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHH---HHHTCCCCCSCCSTTEEECSTTCEEECCCSHHHHH
T ss_pred HHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---hhcCCeecCCCCHHHEEECCCCCEEEeeCCCceec
Confidence 999975 89888764 445799999999999999999999 665 9999999999999999999999999999876
Q ss_pred CCcCcccccccccccccccccccC----cCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhc
Q 002214 815 SEEDSMKQTQTLATIGYIAPEYGR----EGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIM 890 (952)
Q Consensus 815 ~~~~~~~~~~~~~~~~y~aPE~~~----~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 890 (952)
.... ......||+.|+|||++. ...++.++|||||||++|||++|+.||.........+... +
T Consensus 205 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~-----------~ 271 (340)
T 3an0_A 205 VDSV--AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV-----------V 271 (340)
T ss_dssp SCHH--HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHH-----------H
T ss_pred cccc--ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHH-----------h
Confidence 4321 222356999999999864 3478899999999999999999999986532111111111 1
Q ss_pred cccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 891 DTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
...... .....++.++.+++.+||+.||++||++.|++++
T Consensus 272 ~~~~~~-------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 272 EEPSPQ-------LPADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp HSCCCC-------CCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred cCCCCC-------CCcccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 110000 0112357789999999999999999999999874
No 241
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.4e-37 Score=362.96 Aligned_cols=252 Identities=24% Similarity=0.351 Sum_probs=202.9
Q ss_pred HhccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccCc-------------hhhHHHHHHHHHHHhCCCCccceeee
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQRE-------------GALNSFDAECEILKTIRHRNLVKIIS 727 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~l~~ 727 (952)
..++|.+.+.||+|+||+||+|+.. +++.||||++..... ...+.+.+|+.++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 4578999999999999999999984 688999999864321 23467899999999999999999999
Q ss_pred EeecCCeeEEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCC---cEE
Q 002214 728 SCTNHNFKALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSM---VAH 804 (952)
Q Consensus 728 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~---~~k 804 (952)
++.+.+..++||||+++|+|.+.+.... .+++..+..++.|++.||+|| |++||+||||||+||+++.++ .+|
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~Dlkp~Nil~~~~~~~~~~k 189 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICYL---HKHNIVHRDIKPENILLENKNSLLNIK 189 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEESSTTCCSSEE
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEeCCCcHHHEEEecCCCCccEE
Confidence 9999999999999999999999887654 699999999999999999999 789999999999999998776 699
Q ss_pred EeccccccccCCcCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchh
Q 002214 805 LSDFGIAKLLSEEDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLP 884 (952)
Q Consensus 805 l~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 884 (952)
|+|||+|+...... ......||+.|+|||++. +.++.++||||+||++|+|++|..||...... ...
T Consensus 190 l~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~-------- 256 (504)
T 3q5i_A 190 IVDFGLSSFFSKDY--KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ--DII-------- 256 (504)
T ss_dssp ECCCTTCEECCTTS--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHH--------
T ss_pred EEECCCCEEcCCCC--ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH--HHH--------
Confidence 99999998765432 233467999999999887 46899999999999999999999998652211 000
Q ss_pred hhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 885 AVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 885 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
..+......... ..+..+++++.+++.+||..||.+|||+.|++++
T Consensus 257 --~~i~~~~~~~~~-----~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 257 --KKVEKGKYYFDF-----NDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp --HHHHHCCCCCCH-----HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred --HHHHcCCCCCCc-----cccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 001111110000 1123467889999999999999999999999865
No 242
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=3.1e-37 Score=345.47 Aligned_cols=265 Identities=20% Similarity=0.217 Sum_probs=193.3
Q ss_pred hccCCccceecCccceEEEEEEeC-CCcEEEEEEeecc--CchhhHHHHHHHHHHHhCCCCccceeeeEeecCC------
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQ--REGALNSFDAECEILKTIRHRNLVKIISSCTNHN------ 733 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 733 (952)
.++|++.+.||+|+||.||+|.+. +++.||||++... .....+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 468999999999999999999874 6899999998653 2334567889999999999999999999997654
Q ss_pred eeEEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccc
Q 002214 734 FKALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKL 813 (952)
Q Consensus 734 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~ 813 (952)
..++||||+++ +|.+.+.. .+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+|+.
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~i~~qi~~al~~l---H~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHL---HSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS---CCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred ceEEEEEcCCC-CHHHHHhh---ccCHHHHHHHHHHHHHHHHHH---HHCCeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 78999999975 78777752 489999999999999999999 788999999999999999999999999999986
Q ss_pred cCCcCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhc---cchhhhh---
Q 002214 814 LSEEDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWIN---DSLPAVM--- 887 (952)
Q Consensus 814 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~---~~~~~~~--- 887 (952)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..+..... ...++..
T Consensus 177 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~ 253 (371)
T 2xrw_A 177 AGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI-DQWNKVIEQLGTPCPEFMKKL 253 (371)
T ss_dssp ---------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHC-CCCCCHHHHTTS
T ss_pred ccccc--ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHHHh
Confidence 54321 223457899999999999889999999999999999999999998653211 11111111 0001100
Q ss_pred -----hhcccccc-c-h-hhH--------HHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 888 -----NIMDTNLL-S-E-DEE--------HANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 888 -----~~~~~~~~-~-~-~~~--------~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
..+..... . . ... .........+.++.+++.+||..||++|||++|++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 254 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp CHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred hhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 00000000 0 0 000 0000122347789999999999999999999999875
No 243
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.1e-37 Score=362.55 Aligned_cols=251 Identities=25% Similarity=0.379 Sum_probs=205.8
Q ss_pred hccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccC---chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQR---EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALV 738 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 738 (952)
.++|++.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 467999999999999999999985 79999999986442 33457789999999999999999999999999999999
Q ss_pred EEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeee---CCCCcEEEeccccccccC
Q 002214 739 LEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLL---DDSMVAHLSDFGIAKLLS 815 (952)
Q Consensus 739 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill---~~~~~~kl~Dfgla~~~~ 815 (952)
|||+++|+|.+.+.... .+++..+..++.|++.||+|| |++||+||||||+||++ +.++.+||+|||+|+...
T Consensus 105 ~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 180 (484)
T 3nyv_A 105 GEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYM---HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180 (484)
T ss_dssp ECCCCSCBHHHHHHTCS-CCBHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBC
T ss_pred EecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcc
Confidence 99999999999887654 699999999999999999999 78899999999999999 567899999999998765
Q ss_pred CcCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhcccccc
Q 002214 816 EEDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLL 895 (952)
Q Consensus 816 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 895 (952)
.... .....||+.|+|||++.+ .++.++||||+||++|+|++|+.||...... .... .+......
T Consensus 181 ~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~----------~i~~~~~~ 245 (484)
T 3nyv_A 181 ASKK--MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY--DILK----------KVEKGKYT 245 (484)
T ss_dssp CCCS--HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHH----------HHHHCCCC
T ss_pred cccc--cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH--HHHH----------HHHcCCCC
Confidence 4332 233569999999998865 6899999999999999999999998652111 1100 01111100
Q ss_pred chhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 896 SEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 896 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
... ..+..+++++.+++.+||+.||++|||+.|++++
T Consensus 246 ~~~-----~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 246 FEL-----PQWKKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp CCS-----GGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCC-----cccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 000 1123467889999999999999999999999874
No 244
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=2.5e-38 Score=340.28 Aligned_cols=252 Identities=23% Similarity=0.343 Sum_probs=201.9
Q ss_pred hccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccC--chhhHHHHHHHHHHHhCCCCccceeeeEee--cCCeeEE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQR--EGALNSFDAECEILKTIRHRNLVKIISSCT--NHNFKAL 737 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~l 737 (952)
.++|++.+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|++++++++||||+++++++. ..+..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 468999999999999999999884 68999999987543 334567899999999999999999999874 4578899
Q ss_pred EEEccCCCChhHHhhhc---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCC-----eEeCCCCCCCeeeCCCCcEEEeccc
Q 002214 738 VLEYMPKGSLEDCMYAS---NFNLDIFQRLGIMIDVASALEYLHFGHSNP-----IVHCDIKPSNVLLDDSMVAHLSDFG 809 (952)
Q Consensus 738 v~e~~~~g~L~~~l~~~---~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~-----ivH~Dlk~~Nill~~~~~~kl~Dfg 809 (952)
||||+++++|.+++... ...+++..++.++.|++.||+|| |+.+ |+||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~l---H~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKEC---HRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH---HHHC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHH---hcccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 99999999999998753 23589999999999999999999 5666 9999999999999999999999999
Q ss_pred cccccCCcCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhh
Q 002214 810 IAKLLSEEDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNI 889 (952)
Q Consensus 810 la~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 889 (952)
+++....... ......+++.|+|||.+.+..++.++||||||+++|||++|+.||...... .... .
T Consensus 162 ~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~-----------~ 227 (279)
T 2w5a_A 162 LARILNHDTS-FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK--ELAG-----------K 227 (279)
T ss_dssp HHHHC---CH-HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHH-----------H
T ss_pred hheeeccccc-cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH--HHHH-----------H
Confidence 9987643322 122346899999999998888999999999999999999999998653211 0000 0
Q ss_pred ccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 002214 890 MDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRL 938 (952)
Q Consensus 890 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L 938 (952)
+...... ..+..++.++.+++.+||+.||++||++.|+++++
T Consensus 228 i~~~~~~-------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~ 269 (279)
T 2w5a_A 228 IREGKFR-------RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENP 269 (279)
T ss_dssp HHHTCCC-------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred Hhhcccc-------cCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhCh
Confidence 0000000 01234577899999999999999999999999765
No 245
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=7.6e-38 Score=348.79 Aligned_cols=264 Identities=20% Similarity=0.270 Sum_probs=185.6
Q ss_pred hccCCccceecCccceEEEEEEe-CCCcEEEEEEeecc--CchhhHHHHHHHHHHHhCCCCccceeeeEeecC------C
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQ--REGALNSFDAECEILKTIRHRNLVKIISSCTNH------N 733 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 733 (952)
.++|++.+.||+|+||.||+|.+ .+|+.||||++... .....+.+.+|++++++++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 46899999999999999999987 56899999998643 233456788999999999999999999998654 5
Q ss_pred eeEEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccc
Q 002214 734 FKALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKL 813 (952)
Q Consensus 734 ~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~ 813 (952)
..++||||+ +++|.+++.. ..+++..+..++.|+++||+|| |++||+||||||+||+++.++.+||+|||+|+.
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~L---H~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~ 181 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC--QKLTDDHVQFLIYQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARH 181 (367)
T ss_dssp CCEEEEECC-CEECC-------CCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTCCEEECC------
T ss_pred eEEEEeccc-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHH---HHCCeeeCCCCHhhEEECCCCCEEEeecccccc
Confidence 679999999 7899988865 3699999999999999999999 789999999999999999999999999999986
Q ss_pred cCCcCcccccccccccccccccccCc-CCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhh---hccchhhhhhh
Q 002214 814 LSEEDSMKQTQTLATIGYIAPEYGRE-GQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRW---INDSLPAVMNI 889 (952)
Q Consensus 814 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~---~~~~~~~~~~~ 889 (952)
.... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||...... ..+... .....++....
T Consensus 182 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g~p~~~~~~~ 256 (367)
T 2fst_X 182 TADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPGAELLKK 256 (367)
T ss_dssp -------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCSCCHHHHTT
T ss_pred cccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHHH
Confidence 5432 234578999999998876 67899999999999999999999998653211 111111 11111110000
Q ss_pred ccc--------cccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 890 MDT--------NLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 890 ~~~--------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
+.. .+..............+++++.+|+.+||..||++|||+.|++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 257 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp CCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 000 000000000011123456789999999999999999999999875
No 246
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.2e-36 Score=348.71 Aligned_cols=353 Identities=20% Similarity=0.258 Sum_probs=246.0
Q ss_pred CeEEEEEecCCCCcccCCccccCCcccCeeeccccccccccCCCcCCcCCCcEEeCcCCcccccCChhhcCCCCCCeEee
Q 002214 33 NRVTSLTISDLGLAGTIPSHLGNLSSLQTLVLSRNWFSGTIPKEIGNLTKLKELHLDYNKLQGEIPEELGNLAELEMLVL 112 (952)
Q Consensus 33 ~~~~~l~l~~~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 112 (952)
.++++|+++++.+++ +| .++.+++|++|+|++|++++ +| ++.+++|++|+|++|++.+ +| ++++++|++|++
T Consensus 42 ~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~-~~--~~~l~~L~~L~L 113 (457)
T 3bz5_A 42 ATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTN-LD--VTPLTKLTYLNC 113 (457)
T ss_dssp TTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC-CC--CTTCTTCCEEEC
T ss_pred CCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCce-ee--cCCCCcCCEEEC
Confidence 578999999999996 46 79999999999999999995 45 8999999999999999995 44 899999999999
Q ss_pred cCccCccccCcccccccccccceeeccccccccCCCCCCCCCCccceEEcccCcccccCCccccCCCCCcEEEccCCccc
Q 002214 113 NNNLLTGTIPASIFNLSFISTALDFSDNSLTGSFPYDMCPGLPRLKGLYVSYNQFKGPIPNNLWHCKELSSVSLSYNQFT 192 (952)
Q Consensus 113 ~~n~l~~~~p~~~~~l~~l~~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~ 192 (952)
++|++++ +| + ..+++|++|++++|++++. .++.+++|+.|++++|+..
T Consensus 114 ~~N~l~~-l~--~--------------------------~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~ 161 (457)
T 3bz5_A 114 DTNKLTK-LD--V--------------------------SQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKI 161 (457)
T ss_dssp CSSCCSC-CC--C--------------------------TTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCC
T ss_pred CCCcCCe-ec--C--------------------------CCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCcc
Confidence 9999883 32 2 3456788888888888753 2777888888888888544
Q ss_pred ccCCccccccCCccEEEeeCCcCCccCchhhhccCCCcEeeeccccccccCCccccCCCCccEEEeeCccccccCCCCcc
Q 002214 193 GRLPRDLGNSTKLKSLDLGFNNLNGEIPQEIGNLRNLEILGIDQSNLVGFVPDTIFNISTLKILSLFNNTLSGNLPSSKN 272 (952)
Q Consensus 193 ~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 272 (952)
+.+ .++.+++|++|++++|++++ +| ++.+++|+.|++++|++.+. .+..+++|++|++++|++++ +|
T Consensus 162 ~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip---- 228 (457)
T 3bz5_A 162 TKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID---- 228 (457)
T ss_dssp CCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC----
T ss_pred ccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC----
Confidence 344 47778888888888888875 44 77888888888888888776 37778888888888888886 33
Q ss_pred cCCCCCcceEEcccCcCCCCCCcccccchhhhhhhccccCccccccccCcceeechhhHHHHHHHhhccccccccCCCcc
Q 002214 273 LIGLPNLEGLNLGLNNLSGSIPSFFFNASKLYALELGYNSNLKRLGLERNYLTFSTSELMSLFSALVNCKSLKIGNLINL 352 (952)
Q Consensus 273 l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l~l~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L 352 (952)
+..+++|+.|++++|++++..+. .+++|
T Consensus 229 ~~~l~~L~~L~l~~N~l~~~~~~----------------------------------------------------~l~~L 256 (457)
T 3bz5_A 229 VTPLTQLTYFDCSVNPLTELDVS----------------------------------------------------TLSKL 256 (457)
T ss_dssp CTTCTTCSEEECCSSCCSCCCCT----------------------------------------------------TCTTC
T ss_pred ccccCCCCEEEeeCCcCCCcCHH----------------------------------------------------HCCCC
Confidence 66788888899988888865332 22233
Q ss_pred cEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCccCCCCCCcEEecccc
Q 002214 353 TTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLRILSLSSN 432 (952)
Q Consensus 353 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 432 (952)
+.|++++| +|+.|++++|.+.+..| +..+++|+.|++++|...+.+|. ..++|+.|++++|
T Consensus 257 ~~L~l~~n--------------~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~ 317 (457)
T 3bz5_A 257 TTLHCIQT--------------DLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDC---QAAGITELDLSQN 317 (457)
T ss_dssp CEEECTTC--------------CCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC
T ss_pred CEEeccCC--------------CCCEEECCCCccCCccc--ccccccCCEEECCCCcccceecc---CCCcceEechhhc
Confidence 33443332 12333444444333222 23344444444444444333332 2234444444433
Q ss_pred ccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEccCccccCcccc
Q 002214 433 ELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNKLQGPIPE 512 (952)
Q Consensus 433 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 512 (952)
++|+.|++++|++++. + +..+++|+.|++++|++++ ++.|..|++++|++.|.
T Consensus 318 -------------~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~--- 370 (457)
T 3bz5_A 318 -------------PKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE--- 370 (457)
T ss_dssp -------------TTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE---
T ss_pred -------------ccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec---
Confidence 4566666666666653 2 6666777777777777764 24566677777877754
Q ss_pred cccccccccEEeCCCCcccccCccch
Q 002214 513 SFGELVSLEFLDLSNNDLSGVIPASL 538 (952)
Q Consensus 513 ~~~~l~~L~~L~Ls~N~l~~~~~~~~ 538 (952)
..+..|+.+++++|+++|.+|..+
T Consensus 371 --~~~~~l~~l~l~~N~l~g~ip~~~ 394 (457)
T 3bz5_A 371 --GQTITMPKETLTNNSLTIAVSPDL 394 (457)
T ss_dssp --EEEEECCCBCCBTTBEEEECCTTC
T ss_pred --ceeeecCccccccCcEEEEcChhH
Confidence 345667778888888888777654
No 247
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=2.4e-37 Score=345.72 Aligned_cols=269 Identities=21% Similarity=0.279 Sum_probs=203.4
Q ss_pred HhccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccC-chhhHHHHHHHHHHHhCCCCccceeeeEeecC-----Ce
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQR-EGALNSFDAECEILKTIRHRNLVKIISSCTNH-----NF 734 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 734 (952)
..++|++.+.||+|+||.||+|++. +++.||||++.... ....+.+.+|++++++++||||+++++++... ..
T Consensus 25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 3468999999999999999999874 68899999986543 33447789999999999999999999998654 46
Q ss_pred eEEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEecccccccc
Q 002214 735 KALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLL 814 (952)
Q Consensus 735 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~ 814 (952)
.++||||++ |+|.+++... .+++.++..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++..
T Consensus 105 ~~iv~e~~~-~~L~~~l~~~--~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~ 178 (364)
T 3qyz_A 105 VYIVQDLME-TDLYKLLKTQ--HLSNDHICYFLYQILRGLKYI---HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 178 (364)
T ss_dssp EEEEEECCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEcccC-cCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCChHhEEECCCCCEEEEeCcceEec
Confidence 899999996 5899988764 489999999999999999999 7899999999999999999999999999999876
Q ss_pred CCcCccc--ccccccccccccccccC-cCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhh---ccchhhhhh
Q 002214 815 SEEDSMK--QTQTLATIGYIAPEYGR-EGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWI---NDSLPAVMN 888 (952)
Q Consensus 815 ~~~~~~~--~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~---~~~~~~~~~ 888 (952)
....... .....||+.|+|||++. ...++.++||||+||++|||++|+.||......+ ...... .....+...
T Consensus 179 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~ 257 (364)
T 3qyz_A 179 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD-QLNHILGILGSPSQEDLN 257 (364)
T ss_dssp CGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG-HHHHHHHHHCSCCHHHHH
T ss_pred CCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH-HHHHHHHHhCCCCHHHHH
Confidence 5433221 23357999999999764 4458999999999999999999999986532211 111111 111000000
Q ss_pred -hcc-------ccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 889 -IMD-------TNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 889 -~~~-------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
..+ .................++.++.+++.+||+.||++|||+.|++++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 258 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp TCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000 0000000000011123457789999999999999999999999874
No 248
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.9e-37 Score=341.18 Aligned_cols=256 Identities=19% Similarity=0.261 Sum_probs=203.2
Q ss_pred HHHhccCCcc-ceecCccceEEEEEEeC-CCcEEEEEEeeccC--chhhHHHHHHHHHHHhC-CCCccceeeeEeecCCe
Q 002214 660 LRATDQFSEE-NLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQR--EGALNSFDAECEILKTI-RHRNLVKIISSCTNHNF 734 (952)
Q Consensus 660 ~~~~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 734 (952)
....++|.+. +.||+|+||.||+|... +|+.||+|++.... ......+.+|+.+++++ +||||+++++++.+.+.
T Consensus 24 ~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~ 103 (327)
T 3lm5_A 24 ENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSE 103 (327)
T ss_dssp HHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred HhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCe
Confidence 4456678877 89999999999999885 69999999986543 23356789999999999 56999999999999999
Q ss_pred eEEEEEccCCCChhHHhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCC---CCcEEEecccc
Q 002214 735 KALVLEYMPKGSLEDCMYAS-NFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDD---SMVAHLSDFGI 810 (952)
Q Consensus 735 ~~lv~e~~~~g~L~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~---~~~~kl~Dfgl 810 (952)
.++||||+++|+|.+++... ...+++.++..++.|++.||+|| |++||+||||||+||+++. ++.+||+|||+
T Consensus 104 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~L---H~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~ 180 (327)
T 3lm5_A 104 IILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYL---HQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGM 180 (327)
T ss_dssp EEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEESCBTTBCCEEECCGGG
T ss_pred EEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HHCCeecCcCChHHEEEecCCCCCcEEEeeCcc
Confidence 99999999999999988643 34689999999999999999999 7899999999999999998 78999999999
Q ss_pred ccccCCcCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhc
Q 002214 811 AKLLSEEDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIM 890 (952)
Q Consensus 811 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 890 (952)
++....... .....||+.|+|||++.+..++.++||||||+++|||++|+.||......+ ..... ...
T Consensus 181 a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i--------~~~- 248 (327)
T 3lm5_A 181 SRKIGHACE--LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE-TYLNI--------SQV- 248 (327)
T ss_dssp CEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHH--------HHT-
T ss_pred ccccCCccc--cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH-HHHHH--------Hhc-
Confidence 987643322 233569999999999999999999999999999999999999986522111 00000 000
Q ss_pred cccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 891 DTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
..... ......+++.+.+++.+||+.||++|||++|++++
T Consensus 249 ~~~~~-------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 249 NVDYS-------EETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp CCCCC-------TTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred ccccC-------chhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 00000 00123457789999999999999999999999865
No 249
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=353.62 Aligned_cols=268 Identities=20% Similarity=0.276 Sum_probs=182.9
Q ss_pred ccCCc-cceecCccceEEEEEEeC---CCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEee--cCCeeEE
Q 002214 664 DQFSE-ENLIGIGSYGSVYKGRFP---DGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSCT--NHNFKAL 737 (952)
Q Consensus 664 ~~~~~-~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~l 737 (952)
+.|.+ +++||+|+||+||+|+.. +++.||||++..... ...+.+|+.++++++||||+++++++. .....++
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~l 97 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWL 97 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC--CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC--CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEE
Confidence 45665 568999999999999964 578999999864432 357889999999999999999999995 4678999
Q ss_pred EEEccCCCChhHHhhhc--------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeee----CCCCcEEE
Q 002214 738 VLEYMPKGSLEDCMYAS--------NFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLL----DDSMVAHL 805 (952)
Q Consensus 738 v~e~~~~g~L~~~l~~~--------~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill----~~~~~~kl 805 (952)
||||++ |+|.+++... ...+++..+..++.|++.||+|| |++||+||||||+|||+ +.++.+||
T Consensus 98 v~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~L---H~~~ivH~Dlkp~NIll~~~~~~~~~~kl 173 (405)
T 3rgf_A 98 LFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYL---HANWVLHRDLKPANILVMGEGPERGRVKI 173 (405)
T ss_dssp EEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECCSSTTTTCEEE
T ss_pred EEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHH---HhCCEeCCCcCHHHeEEecCCCCCCcEEE
Confidence 999996 4787776532 12489999999999999999999 78999999999999999 77899999
Q ss_pred eccccccccCCcCc--ccccccccccccccccccCc-CCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccc
Q 002214 806 SDFGIAKLLSEEDS--MKQTQTLATIGYIAPEYGRE-GQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDS 882 (952)
Q Consensus 806 ~Dfgla~~~~~~~~--~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~ 882 (952)
+|||+|+....... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||............+....
T Consensus 174 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~ 253 (405)
T 3rgf_A 174 ADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQ 253 (405)
T ss_dssp CCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHH
T ss_pred EECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHH
Confidence 99999987653221 22234678999999998876 4589999999999999999999999965322110000000000
Q ss_pred hhhhhhhc------------------------cccccchh--hHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHH
Q 002214 883 LPAVMNIM------------------------DTNLLSED--EEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIIS 936 (952)
Q Consensus 883 ~~~~~~~~------------------------~~~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 936 (952)
...+.+.+ ........ ...........++++.+|+.+||..||++|||++|+++
T Consensus 254 l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~ 333 (405)
T 3rgf_A 254 LDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ 333 (405)
T ss_dssp HHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00000000 00000000 00000001112567899999999999999999999987
Q ss_pred H
Q 002214 937 R 937 (952)
Q Consensus 937 ~ 937 (952)
+
T Consensus 334 h 334 (405)
T 3rgf_A 334 D 334 (405)
T ss_dssp S
T ss_pred C
Confidence 5
No 250
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.2e-38 Score=345.98 Aligned_cols=260 Identities=24% Similarity=0.370 Sum_probs=200.3
Q ss_pred cCHHHHHHHhccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccCchhhHHHHHHHHHHHhC-CCCccceeeeEeec
Q 002214 654 YSHDELLRATDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQREGALNSFDAECEILKTI-RHRNLVKIISSCTN 731 (952)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 731 (952)
++..++....++|++.+.||+|+||.||+|++ .+|+.||||++..... ..+.+.+|+.+++++ +||||+++++++..
T Consensus 14 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 92 (326)
T 2x7f_A 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAFIK 92 (326)
T ss_dssp --CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-TTHHHHHHHHHHHHHCCSTTBCCEEEEEEE
T ss_pred ccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc-cHHHHHHHHHHHHhccCCCCeeeeeeEEee
Confidence 33344445678899999999999999999998 5789999999865433 346789999999999 89999999999876
Q ss_pred ------CCeeEEEEEccCCCChhHHhhhcC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEE
Q 002214 732 ------HNFKALVLEYMPKGSLEDCMYASN-FNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAH 804 (952)
Q Consensus 732 ------~~~~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~k 804 (952)
.+..++||||+++|+|.+++.... ..+++..+..++.|++.||+|| |++||+||||||+||+++.++.+|
T Consensus 93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~dlkp~NIl~~~~~~~k 169 (326)
T 2x7f_A 93 KNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHL---HQHKVIHRDIKGQNVLLTENAEVK 169 (326)
T ss_dssp CC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCSGGGEEECTTCCEE
T ss_pred ccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHH---HHCCccccCCcHHHEEEcCCCCEE
Confidence 467899999999999999987643 4689999999999999999999 788999999999999999999999
Q ss_pred EeccccccccCCcCcccccccccccccccccccC-----cCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhh
Q 002214 805 LSDFGIAKLLSEEDSMKQTQTLATIGYIAPEYGR-----EGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWI 879 (952)
Q Consensus 805 l~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~ 879 (952)
|+|||++....... .......+++.|+|||++. +..++.++|||||||++|||++|+.||....... ......
T Consensus 170 l~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~ 247 (326)
T 2x7f_A 170 LVDFGVSAQLDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR-ALFLIP 247 (326)
T ss_dssp ECCCTTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHH
T ss_pred EeeCcCceecCcCc-cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH-HHHHhh
Confidence 99999998664322 1223356899999999886 5678899999999999999999999986532110 000000
Q ss_pred ccchhhhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 880 NDSLPAVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
... .... .+..++.++.+++.+||..||++||++.|++++
T Consensus 248 ~~~--------~~~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 248 RNP--------APRL----------KSKKWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp HSC--------CCCC----------SCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred cCc--------cccC----------CccccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000 0000 112356789999999999999999999999874
No 251
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.6e-37 Score=352.33 Aligned_cols=266 Identities=20% Similarity=0.228 Sum_probs=200.1
Q ss_pred hccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccCchhhHHHHHHHHHHHhCC--------CCccceeeeEee---
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQREGALNSFDAECEILKTIR--------HRNLVKIISSCT--- 730 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~~~~~--- 730 (952)
.++|++.+.||+|+||+||+|++ .+++.||||+++.. ....+.+.+|++++++++ ||||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 46899999999999999999987 46899999998643 334567889999999985 788999999987
Q ss_pred -cCCeeEEEEEccCCCChhHHhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEeCCCCCCCeeeCCCC------
Q 002214 731 -NHNFKALVLEYMPKGSLEDCMYAS-NFNLDIFQRLGIMIDVASALEYLHFGHSN-PIVHCDIKPSNVLLDDSM------ 801 (952)
Q Consensus 731 -~~~~~~lv~e~~~~g~L~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~-~ivH~Dlk~~Nill~~~~------ 801 (952)
.....++||||+ ++++.+.+... ...+++..+..++.|++.||+|| |++ ||+||||||+|||++.++
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~l---H~~~givHrDikp~NIll~~~~~~~~~~ 190 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYL---HTKCRIIHTDIKPENILLSVNEQYIRRL 190 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHH---HHTTCEECCCCSGGGEEECCCHHHHHHH
T ss_pred CCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHH---HHhCCEecCCCCHHHeeEeccchhhhhh
Confidence 556889999999 55666655443 35799999999999999999999 677 999999999999999775
Q ss_pred -------------------------------------------cEEEeccccccccCCcCcccccccccccccccccccC
Q 002214 802 -------------------------------------------VAHLSDFGIAKLLSEEDSMKQTQTLATIGYIAPEYGR 838 (952)
Q Consensus 802 -------------------------------------------~~kl~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~ 838 (952)
.+||+|||+|+..... .....||+.|+|||++.
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE~~~ 266 (397)
T 1wak_A 191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLEVLI 266 (397)
T ss_dssp HHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHHHHH
T ss_pred hhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCChhhc
Confidence 7999999999876432 23356899999999999
Q ss_pred cCCcCcccchHhHHHHHHHHHhCCCCCCccccCccch-----hhh---hccchhhh-------hhhcccc----------
Q 002214 839 EGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSI-----KRW---INDSLPAV-------MNIMDTN---------- 893 (952)
Q Consensus 839 ~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~-----~~~---~~~~~~~~-------~~~~~~~---------- 893 (952)
+..++.++|||||||++|||++|+.||......+... ... ....-... ...+...
T Consensus 267 ~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (397)
T 1wak_A 267 GSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLK 346 (397)
T ss_dssp TSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCC
T ss_pred CCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccC
Confidence 8889999999999999999999999997543222110 000 00000000 0000000
Q ss_pred ccchhh--HHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 894 LLSEDE--EHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 894 ~~~~~~--~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
...... ......+...++++.+|+.+||+.||++|||++|++++
T Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 347 PWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp CCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred CcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 000000 00001134567889999999999999999999999864
No 252
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1.8e-37 Score=337.23 Aligned_cols=268 Identities=24% Similarity=0.337 Sum_probs=202.6
Q ss_pred ccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccC--chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEEE
Q 002214 664 DQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQR--EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVLE 740 (952)
Q Consensus 664 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 740 (952)
++|++.+.||+|+||.||+|+.. +|+.||||+++... ....+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57899999999999999999985 68999999986543 2234678899999999999999999999999999999999
Q ss_pred ccCCCChhHHhhhcC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcCc
Q 002214 741 YMPKGSLEDCMYASN-FNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEEDS 819 (952)
Q Consensus 741 ~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 819 (952)
|++ ++|.+++.... ..+++..+..++.|+++||+|| |++||+||||||+||+++.++.+||+|||.+........
T Consensus 83 ~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~ 158 (299)
T 2r3i_A 83 FLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC---HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 158 (299)
T ss_dssp CCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSB
T ss_pred ccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHH---HHCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCcc
Confidence 997 69999887654 4689999999999999999999 788999999999999999999999999999987643322
Q ss_pred ccccccccccccccccccCcCC-cCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhcc---ch----hhhhh--h
Q 002214 820 MKQTQTLATIGYIAPEYGREGQ-VSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWIND---SL----PAVMN--I 889 (952)
Q Consensus 820 ~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~---~~----~~~~~--~ 889 (952)
......+|+.|+|||.+.+.. ++.++||||||+++|||++|+.||......+ ...+.... .. +.... .
T Consensus 159 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (299)
T 2r3i_A 159 -TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTLGTPDEVVWPGVTSMPD 236 (299)
T ss_dssp -CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred -ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHH-HHHHHHHHhCCCchhhhhHhhcCcc
Confidence 223356899999999887754 7899999999999999999999986532111 11111100 00 00000 0
Q ss_pred ccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 890 MDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 890 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
...................++.++.+++.+||+.||++|||+.|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~h 284 (299)
T 2r3i_A 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284 (299)
T ss_dssp CCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000000000000011123457789999999999999999999999873
No 253
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=4.7e-37 Score=333.69 Aligned_cols=253 Identities=23% Similarity=0.323 Sum_probs=204.5
Q ss_pred HHhccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccC---------chhhHHHHHHHHHHHhCC-CCccceeeeEe
Q 002214 661 RATDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQR---------EGALNSFDAECEILKTIR-HRNLVKIISSC 729 (952)
Q Consensus 661 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---------~~~~~~~~~E~~~l~~l~-h~niv~l~~~~ 729 (952)
...++|.+.+.||+|+||.||+|.+. +|+.||||++.... ....+.+.+|++++++++ ||||+++++++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 34578999999999999999999984 68999999986543 122456889999999995 99999999999
Q ss_pred ecCCeeEEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccc
Q 002214 730 TNHNFKALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFG 809 (952)
Q Consensus 730 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfg 809 (952)
...+..++||||+++++|.+++.... .+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~kl~dfg 169 (298)
T 1phk_A 94 ETNTFFFLVFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLEVICAL---HKLNIVHRDLKPENILLDDDMNIKLTDFG 169 (298)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTCCEEECCCT
T ss_pred ccCCeEEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCcceEEEcCCCcEEEeccc
Confidence 99999999999999999999987653 689999999999999999999 78999999999999999999999999999
Q ss_pred cccccCCcCcccccccccccccccccccC------cCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccch
Q 002214 810 IAKLLSEEDSMKQTQTLATIGYIAPEYGR------EGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSL 883 (952)
Q Consensus 810 la~~~~~~~~~~~~~~~~~~~y~aPE~~~------~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 883 (952)
++........ .....+++.|+|||++. ...++.++||||||+++|||++|+.||...... ...
T Consensus 170 ~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~------- 238 (298)
T 1phk_A 170 FSCQLDPGEK--LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM--LML------- 238 (298)
T ss_dssp TCEECCTTCC--BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHH-------
T ss_pred chhhcCCCcc--cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHH--HHH-------
Confidence 9987654322 23356899999999874 456889999999999999999999998542110 000
Q ss_pred hhhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHH
Q 002214 884 PAVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIIS 936 (952)
Q Consensus 884 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 936 (952)
............ .....++.++.+++.+||+.||++|||+.|+++
T Consensus 239 ---~~~~~~~~~~~~-----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 239 ---RMIMSGNYQFGS-----PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp ---HHHHHTCCCCCT-----TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred ---HHHhcCCcccCc-----ccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 000010000000 011345778999999999999999999999986
No 254
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.9e-37 Score=353.27 Aligned_cols=265 Identities=21% Similarity=0.286 Sum_probs=203.0
Q ss_pred hccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccCchhhHHHHHHHHHHHhC------CCCccceeeeEeecCCee
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQREGALNSFDAECEILKTI------RHRNLVKIISSCTNHNFK 735 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~~~~~~~~~~ 735 (952)
..+|++.+.||+|+||+||+|.+. +++.||||+++... .....+.+|+++++.+ +|+||+++++++...+..
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 457999999999999999999874 58999999986432 2345677888888887 577999999999999999
Q ss_pred EEEEEccCCCChhHHhhhcC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCc--EEEecccccc
Q 002214 736 ALVLEYMPKGSLEDCMYASN-FNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMV--AHLSDFGIAK 812 (952)
Q Consensus 736 ~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~--~kl~Dfgla~ 812 (952)
++||||+. ++|.+++.... ..+++..+..++.|+++||+|| |++||+||||||+|||++.++. +||+|||+|+
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~ 250 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDAL---HKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHH---HHHTEECSCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHeEEccCCCcceEEeecccce
Confidence 99999995 68988887654 3589999999999999999999 6889999999999999999887 9999999997
Q ss_pred ccCCcCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhc---cchhhh---
Q 002214 813 LLSEEDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWIN---DSLPAV--- 886 (952)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~---~~~~~~--- 886 (952)
..... .....+|+.|+|||++.+..++.++|||||||++|||++|+.||......+ .+..+.. ...+..
T Consensus 251 ~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~-~l~~i~~~~~~p~~~~~~~ 325 (429)
T 3kvw_A 251 YEHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGD-QLACMIELLGMPSQKLLDA 325 (429)
T ss_dssp ETTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHHT
T ss_pred ecCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHcCCCCHHHHHh
Confidence 65332 223568999999999999899999999999999999999999986532211 1111110 000000
Q ss_pred ----hhhccccc-----------------------------cchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHH
Q 002214 887 ----MNIMDTNL-----------------------------LSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKE 933 (952)
Q Consensus 887 ----~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 933 (952)
...++..- ...........+...++++.+|+.+||+.||++|||++|
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e 405 (429)
T 3kvw_A 326 SKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQ 405 (429)
T ss_dssp BTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred hhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHH
Confidence 00000000 000011111222334678999999999999999999999
Q ss_pred HHHH
Q 002214 934 IISR 937 (952)
Q Consensus 934 v~~~ 937 (952)
++++
T Consensus 406 ~L~H 409 (429)
T 3kvw_A 406 ALRH 409 (429)
T ss_dssp HHTS
T ss_pred HhCC
Confidence 9874
No 255
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.3e-37 Score=373.05 Aligned_cols=250 Identities=20% Similarity=0.276 Sum_probs=205.9
Q ss_pred HHhccCCccceecCccceEEEEEEeC-CCcEEEEEEeecc---CchhhHHHHHHHHHHHhC-CCCccceeeeEeecCCee
Q 002214 661 RATDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQ---REGALNSFDAECEILKTI-RHRNLVKIISSCTNHNFK 735 (952)
Q Consensus 661 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 735 (952)
...++|.+.+.||+|+||.||+|+.. +++.||||+++.. .....+.+..|..++..+ +||+|+++++++.+.+..
T Consensus 338 ~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~ 417 (674)
T 3pfq_A 338 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 417 (674)
T ss_dssp --CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEE
T ss_pred ccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEE
Confidence 34578999999999999999999874 6889999998743 233456788999999988 799999999999999999
Q ss_pred EEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccC
Q 002214 736 ALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLS 815 (952)
Q Consensus 736 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~ 815 (952)
|+||||+++|+|.+++...+ .+++..+..++.||+.||+|| |++||+||||||+|||++.++.+||+|||+|+...
T Consensus 418 ~lV~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~L---H~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~ 493 (674)
T 3pfq_A 418 YFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFL---QSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 493 (674)
T ss_dssp EEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTSEECCCCCSTTEEECSSSCEEECCCTTCEECC
T ss_pred EEEEeCcCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeEeccCChhhEEEcCCCcEEEeecceeeccc
Confidence 99999999999999998654 699999999999999999999 78999999999999999999999999999998643
Q ss_pred CcCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhcccccc
Q 002214 816 EEDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLL 895 (952)
Q Consensus 816 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 895 (952)
... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||..... ...+. .++....
T Consensus 494 ~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~-~~~~~-----------~i~~~~~- 559 (674)
T 3pfq_A 494 WDG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-DELFQ-----------SIMEHNV- 559 (674)
T ss_dssp CTT-CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHH-----------HHHSSCC-
T ss_pred cCC-cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH-HHHHH-----------HHHhCCC-
Confidence 322 223446799999999999999999999999999999999999999865211 10111 1111111
Q ss_pred chhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCH-----HHHHH
Q 002214 896 SEDEEHANVAKQSCASSVLSLAMECTSESPENRVNT-----KEIIS 936 (952)
Q Consensus 896 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~ev~~ 936 (952)
..+..+++++.+|+.+||+.||++||++ .||.+
T Consensus 560 --------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 560 --------AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp --------CCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred --------CCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 0123457789999999999999999997 66654
No 256
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=3.7e-37 Score=338.23 Aligned_cols=267 Identities=20% Similarity=0.298 Sum_probs=196.5
Q ss_pred hccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEee-----------
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSCT----------- 730 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~----------- 730 (952)
.++|++.+.||+|+||.||+|.+. +|+.||||++........+.+.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 467999999999999999999985 58999999998776666788999999999999999999999873
Q ss_pred ---cCCeeEEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeC-CCCcEEEe
Q 002214 731 ---NHNFKALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLD-DSMVAHLS 806 (952)
Q Consensus 731 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~-~~~~~kl~ 806 (952)
+....++||||++ |+|.+++.. ..+++..+..++.|+++||+|| |++||+||||||+||+++ +++.+||+
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~~kl~ 163 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQ--GPLLEEHARLFMYQLLRGLKYI---HSANVLHRDLKPANLFINTEDLVLKIG 163 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTT--CCCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCSGGGEEEETTTTEEEEC
T ss_pred cccccCceeEEeeccC-CCHHHHhhc--CCccHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHEEEcCCCCeEEEc
Confidence 3467899999997 699998865 3589999999999999999999 789999999999999997 67799999
Q ss_pred ccccccccCCcCc--ccccccccccccccccccCc-CCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccc-
Q 002214 807 DFGIAKLLSEEDS--MKQTQTLATIGYIAPEYGRE-GQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDS- 882 (952)
Q Consensus 807 Dfgla~~~~~~~~--~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~- 882 (952)
|||+++....... .......+++.|+|||.+.+ ..++.++||||||+++|||++|+.||......+ .........
T Consensus 164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~ 242 (320)
T 2i6l_A 164 DFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE-QMQLILESIP 242 (320)
T ss_dssp CCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHSC
T ss_pred cCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcC
Confidence 9999987643221 11223457899999997754 678999999999999999999999986532111 111111000
Q ss_pred ------hhhhhhhc----cccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 883 ------LPAVMNIM----DTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 883 ------~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
.++....+ ........ .........++.++.+++.+||+.||++|||++|++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 243 VVHEEDRQELLSVIPVYIRNDMTEPH-KPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp CCCHHHHHHHHTTSCHHHHHHTTSCC-CCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred CCchhhhhhhhhcCcccccccccCCC-CChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 00000000 00000000 00011223567889999999999999999999999874
No 257
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=3.5e-37 Score=345.04 Aligned_cols=263 Identities=20% Similarity=0.262 Sum_probs=197.9
Q ss_pred hccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccC--chhhHHHHHHHHHHHhCCCCccceeeeEeecCCee----
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQR--EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFK---- 735 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~---- 735 (952)
.++|.+.+.||+|+||.||+|.+. +|+.||||++.... ....+.+.+|+.++++++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 468999999999999999999874 68999999986542 33356788999999999999999999999877654
Q ss_pred --EEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccc
Q 002214 736 --ALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKL 813 (952)
Q Consensus 736 --~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~ 813 (952)
++||||++ ++|.+.+. ..+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+|+.
T Consensus 121 ~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 193 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMG---MEFSEEKIQYLVYQMLKGLKYI---HSAGVVHRDLKPGNLAVNEDCELKILDFGLARH 193 (371)
T ss_dssp CCEEEEECCC-EEHHHHTT---SCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred eEEEEEcccc-ccHHHHhh---cCCCHHHHHHHHHHHHHHHHHH---HHCCCcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence 99999996 68877763 3489999999999999999999 788999999999999999999999999999986
Q ss_pred cCCcCcccccccccccccccccccCc-CCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhc---cchhhhhhh
Q 002214 814 LSEEDSMKQTQTLATIGYIAPEYGRE-GQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWIN---DSLPAVMNI 889 (952)
Q Consensus 814 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~---~~~~~~~~~ 889 (952)
.... .....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||......+ ....... ....+....
T Consensus 194 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~ 268 (371)
T 4exu_A 194 ADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGVPGTEFVQK 268 (371)
T ss_dssp ----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCHHHHTT
T ss_pred cccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCcHHHHHH
Confidence 5432 234568999999998876 678999999999999999999999996532111 1111100 000000000
Q ss_pred cc--------ccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 890 MD--------TNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 890 ~~--------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
+. .................+++++.+++.+||+.||++|||++|++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 269 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp CSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 00 0000000000111223467889999999999999999999999875
No 258
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=2.8e-37 Score=348.18 Aligned_cols=265 Identities=24% Similarity=0.346 Sum_probs=196.9
Q ss_pred hccCCccceecCccceEEEEEEeCCCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEeecCC------eeE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSCTNHN------FKA 736 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~~~ 736 (952)
..+|++.+.||+|+||+||+|++..+..||+|++...... ..+|+++++.++||||+++++++...+ ..+
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 3579999999999999999999977777999988543322 237999999999999999999985433 378
Q ss_pred EEEEccCCCChhHHhh--hcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeC-CCCcEEEeccccccc
Q 002214 737 LVLEYMPKGSLEDCMY--ASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLD-DSMVAHLSDFGIAKL 813 (952)
Q Consensus 737 lv~e~~~~g~L~~~l~--~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~-~~~~~kl~Dfgla~~ 813 (952)
+||||++++.+..... .....+++..+..++.|+++||+|| |++||+||||||+||+++ .++.+||+|||+|+.
T Consensus 115 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~L---H~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~ 191 (394)
T 4e7w_A 115 LVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYI---HSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKI 191 (394)
T ss_dssp EEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH---HHCCccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence 9999998754443322 2345799999999999999999999 789999999999999999 899999999999987
Q ss_pred cCCcCcccccccccccccccccccCcC-CcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhh---ccchhhhhhh
Q 002214 814 LSEEDSMKQTQTLATIGYIAPEYGREG-QVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWI---NDSLPAVMNI 889 (952)
Q Consensus 814 ~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~---~~~~~~~~~~ 889 (952)
...... .....+|+.|+|||++.+. .++.++||||+||++|||++|+.||......+ .+.... .....+....
T Consensus 192 ~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~l~~i~~~~g~p~~~~~~~ 268 (394)
T 4e7w_A 192 LIAGEP--NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGID-QLVEIIKVLGTPSREQIKT 268 (394)
T ss_dssp CCTTCC--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHHH
T ss_pred ccCCCC--CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHHh
Confidence 644332 2345689999999988664 58999999999999999999999986532111 111111 1111111111
Q ss_pred cccccc-----c-hhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 890 MDTNLL-----S-EDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 890 ~~~~~~-----~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
+..... . .........+..+++++.+++.+||..||++|||+.|++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 269 MNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp HCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 111000 0 00011112233467889999999999999999999999875
No 259
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=3.5e-37 Score=335.94 Aligned_cols=251 Identities=22% Similarity=0.349 Sum_probs=197.8
Q ss_pred HhccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccC----chhhHHHHHHHHHHHhCCCCccceeeeEee--cCCe
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQR----EGALNSFDAECEILKTIRHRNLVKIISSCT--NHNF 734 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~ 734 (952)
..++|++.+.||+|+||.||+|.+ .+++.||+|++.... ....+.+.+|++++++++||||+++++++. +...
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence 346899999999999999999998 468999999986542 234577899999999999999999999984 4567
Q ss_pred eEEEEEccCCCChhHHhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccc
Q 002214 735 KALVLEYMPKGSLEDCMYAS-NFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKL 813 (952)
Q Consensus 735 ~~lv~e~~~~g~L~~~l~~~-~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~ 813 (952)
.++||||++++ +.+++... ...+++..+..++.|+++||+|| |++||+||||||+||+++.++.+||+|||.+..
T Consensus 83 ~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~L---H~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~ 158 (305)
T 2wtk_C 83 MYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYL---HSQGIVHKDIKPGNLLLTTGGTLKISALGVAEA 158 (305)
T ss_dssp EEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHH---HHCCeeecCCCcccEEEcCCCcEEeeccccccc
Confidence 89999999876 66666543 34689999999999999999999 788999999999999999999999999999987
Q ss_pred cCCcCc-ccccccccccccccccccCcCC--cCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhc
Q 002214 814 LSEEDS-MKQTQTLATIGYIAPEYGREGQ--VSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIM 890 (952)
Q Consensus 814 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~--~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 890 (952)
...... .......+++.|+|||++.+.. ++.++||||||+++|||++|+.||..... .... ..+
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~--------~~i 225 (305)
T 2wtk_C 159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI-----YKLF--------ENI 225 (305)
T ss_dssp CCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHH--------HHH
T ss_pred cCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchH-----HHHH--------HHH
Confidence 643221 1223356899999999887643 47899999999999999999999865211 1100 000
Q ss_pred cccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 891 DTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
.... ...+..+++++.+++.+||+.||++|||+.|++++
T Consensus 226 ~~~~--------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 226 GKGS--------YAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp HHCC--------CCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred hcCC--------CCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0000 00123457789999999999999999999999875
No 260
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=2.4e-37 Score=336.85 Aligned_cols=253 Identities=23% Similarity=0.348 Sum_probs=194.9
Q ss_pred HhccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEeec---------
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSCTN--------- 731 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--------- 731 (952)
..++|++.+.||+|+||.||+|+. .+|+.||||++... ....+.+.+|+.++++++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 456899999999999999999997 47999999998643 3345778999999999999999999998754
Q ss_pred ----CCeeEEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEec
Q 002214 732 ----HNFKALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSD 807 (952)
Q Consensus 732 ----~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~D 807 (952)
.+..++||||+++|+|.+++......+++..++.++.|+++||+|| |++||+||||||+||+++.++.+||+|
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~L---H~~~i~H~dlkp~Nil~~~~~~~kl~d 159 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYI---HSQGIIHRDLKPMNIFIDESRNVKIGD 159 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTSCEEECC
T ss_pred ccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHH---HhCCeecccCCHHhEEEcCCCCEEEee
Confidence 3568999999999999999987766788999999999999999999 788999999999999999999999999
Q ss_pred cccccccCCcC-------------cccccccccccccccccccCcC-CcCcccchHhHHHHHHHHHhCCCCCCccccCcc
Q 002214 808 FGIAKLLSEED-------------SMKQTQTLATIGYIAPEYGREG-QVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEM 873 (952)
Q Consensus 808 fgla~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~ 873 (952)
||+++...... ........|++.|+|||++.+. .++.++|||||||++|||++ ||........
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~ 236 (303)
T 1zy4_A 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVN 236 (303)
T ss_dssp CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHH
T ss_pred CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHH
Confidence 99998764321 1112335689999999988754 68999999999999999998 5432111000
Q ss_pred chhhhhccchhhhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 874 SIKRWINDSLPAVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 874 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
..... .. ...... ...+..++..+.+++.+||+.||++|||+.|++++
T Consensus 237 ~~~~~--------~~-~~~~~~-------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 237 ILKKL--------RS-VSIEFP-------PDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HHHHH--------HS-TTCCCC-------TTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHhc--------cc-cccccC-------ccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 00000 00 000000 00123346678999999999999999999999874
No 261
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=4.3e-37 Score=338.64 Aligned_cols=269 Identities=23% Similarity=0.323 Sum_probs=202.9
Q ss_pred HhccCCccceecCccceEEEEEEe--CCCcEEEEEEeeccCc--hhhHHHHHHHHHHHhC---CCCccceeeeEee----
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRF--PDGIEVAIKVFHLQRE--GALNSFDAECEILKTI---RHRNLVKIISSCT---- 730 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~~~~~---- 730 (952)
..++|++.+.||+|+||.||+|++ .+|+.||+|+++.... .....+.+|+.+++++ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 457899999999999999999998 4688999999865432 2234567788877776 8999999999987
Q ss_pred -cCCeeEEEEEccCCCChhHHhhhcC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEecc
Q 002214 731 -NHNFKALVLEYMPKGSLEDCMYASN-FNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDF 808 (952)
Q Consensus 731 -~~~~~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Df 808 (952)
.....++||||++ |+|.+++.... ..+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~gi~H~dlkp~Nili~~~~~~kl~Df 164 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFL---HSHRVVHRDLKPQNILVTSSGQIKLADF 164 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTCCEEECSC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHH---HHCCceeccCCHHHeEEcCCCCEEEecC
Confidence 5567899999997 69999987654 3589999999999999999999 7889999999999999999999999999
Q ss_pred ccccccCCcCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhcc---c-hh
Q 002214 809 GIAKLLSEEDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWIND---S-LP 884 (952)
Q Consensus 809 gla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~---~-~~ 884 (952)
|+++...... ......+|+.|+|||++.+..++.++|||||||++|||++|+.||......+ ........ . ..
T Consensus 165 g~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~ 241 (326)
T 1blx_A 165 GLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKILDVIGLPGEE 241 (326)
T ss_dssp CSCCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCGG
T ss_pred cccccccCCC--CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHHHcCCCCcc
Confidence 9998764322 2334568999999999998899999999999999999999999986532111 11111100 0 00
Q ss_pred hhhhhc---cccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 885 AVMNIM---DTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 885 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
...... ..................++.++.+++.+||+.||++|||+.|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 242 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp GSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 000000 00000000000011223467889999999999999999999999864
No 262
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=8.4e-38 Score=343.18 Aligned_cols=260 Identities=24% Similarity=0.353 Sum_probs=202.0
Q ss_pred HHhccCCccceecCccceEEEEEEeCCCcEEEEEEeeccC--chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEE
Q 002214 661 RATDQFSEENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQR--EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALV 738 (952)
Q Consensus 661 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 738 (952)
...++|++.+.||+|+||.||+|++.+ .||+|+++... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 30 i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv 107 (319)
T 2y4i_B 30 IPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAII 107 (319)
T ss_dssp SCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEE
T ss_pred CCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEE
Confidence 346789999999999999999999843 49999986542 22345678899999999999999999999999999999
Q ss_pred EEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcC
Q 002214 739 LEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEED 818 (952)
Q Consensus 739 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 818 (952)
|||+++++|.+++...+..+++..+..++.|+++||+|| |++||+||||||+||+++ ++.+||+|||+++......
T Consensus 108 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~l---H~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~ 183 (319)
T 2y4i_B 108 TSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYL---HAKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQ 183 (319)
T ss_dssp CBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHH---HHTTCCCCCCCSTTEEEC---CCEECCCSCCC------
T ss_pred eecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HhCCccccCCChhhEEEe-CCCEEEeecCCcccccccc
Confidence 999999999999987776799999999999999999999 788999999999999998 6799999999987653211
Q ss_pred ----cccccccccccccccccccCc---------CCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhh
Q 002214 819 ----SMKQTQTLATIGYIAPEYGRE---------GQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPA 885 (952)
Q Consensus 819 ----~~~~~~~~~~~~y~aPE~~~~---------~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 885 (952)
........|++.|+|||++.. ..++.++||||||+++|||++|+.||....... .....
T Consensus 184 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~------- 255 (319)
T 2y4i_B 184 AGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEA-IIWQM------- 255 (319)
T ss_dssp ----CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHH-HHHHH-------
T ss_pred ccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHh-------
Confidence 112223458999999998764 357889999999999999999999986532111 00000
Q ss_pred hhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHH
Q 002214 886 VMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDLL 945 (952)
Q Consensus 886 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~~ 945 (952)
........ .+..++.++.+++.+||+.||++|||+.|+++.|+++.++.
T Consensus 256 -~~~~~~~~----------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 256 -GTGMKPNL----------SQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp -HTTCCCCC----------CCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred -ccCCCCCC----------CcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 00000000 01134567899999999999999999999999999887664
No 263
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=7.7e-37 Score=340.65 Aligned_cols=267 Identities=22% Similarity=0.255 Sum_probs=200.7
Q ss_pred hccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccC-chhhHHHHHHHHHHHhCCCCccceeeeEeecC-----Cee
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQR-EGALNSFDAECEILKTIRHRNLVKIISSCTNH-----NFK 735 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~ 735 (952)
.++|.+.+.||+|+||.||+|++. +|+.||||++.... ......+.+|++++++++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 468999999999999999999984 68999999986443 33456788999999999999999999988654 678
Q ss_pred EEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccC
Q 002214 736 ALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLS 815 (952)
Q Consensus 736 ~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~ 815 (952)
++||||++ |+|.+++... .+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+|+...
T Consensus 90 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~L---H~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVL---HGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIID 163 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEeccC-ccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence 99999996 6899988763 589999999999999999999 78899999999999999999999999999998765
Q ss_pred CcCcc---------cccccccccccccccccC-cCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhh---ccc
Q 002214 816 EEDSM---------KQTQTLATIGYIAPEYGR-EGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWI---NDS 882 (952)
Q Consensus 816 ~~~~~---------~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~---~~~ 882 (952)
..... ......||+.|+|||++. +..++.++|||||||++|||++|+.||......+ ...... ...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~ 242 (353)
T 2b9h_A 164 ESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH-QLLLIFGIIGTP 242 (353)
T ss_dssp ----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCC
T ss_pred cccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCC
Confidence 32211 112246899999999765 4678999999999999999999999986532110 000000 000
Q ss_pred ----------hhhhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 883 ----------LPAVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 883 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
.+...+.+...... ...........+++++.+++.+||+.||++|||+.|++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 243 HSDNDLRCIESPRAREYIKSLPMY-PAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp CSTTTTTTCCCHHHHHHHHTSCCC-CCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred chhccccccccchhhHHhhcccCC-CCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00000000000000 0000111224567889999999999999999999999874
No 264
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=4.8e-37 Score=338.31 Aligned_cols=254 Identities=24% Similarity=0.318 Sum_probs=180.0
Q ss_pred hccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccCc-hhhHHHHHHHH-HHHhCCCCccceeeeEeecCCeeEEEE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQRE-GALNSFDAECE-ILKTIRHRNLVKIISSCTNHNFKALVL 739 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~ 739 (952)
.++|.+.+.||+|+||.||+|... +|+.||||+++.... .....+..|+. +++.++||||+++++++..++..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 468999999999999999999984 799999999975532 33345556665 677789999999999999999999999
Q ss_pred EccCCCChhHHhhh----cCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEeCCCCCCCeeeCCCCcEEEecccccccc
Q 002214 740 EYMPKGSLEDCMYA----SNFNLDIFQRLGIMIDVASALEYLHFGHSN-PIVHCDIKPSNVLLDDSMVAHLSDFGIAKLL 814 (952)
Q Consensus 740 e~~~~g~L~~~l~~----~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~-~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~ 814 (952)
||+++ +|.+++.. ....+++..+..++.|+++|++|| |+. ||+||||||+||+++.++.+||+|||+++..
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~l---H~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 176 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHL---KENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQL 176 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHH---HHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHH---hccCCEeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence 99975 78777653 245789999999999999999999 567 9999999999999999999999999999876
Q ss_pred CCcCccccccccccccccccccc----CcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhc
Q 002214 815 SEEDSMKQTQTLATIGYIAPEYG----REGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIM 890 (952)
Q Consensus 815 ~~~~~~~~~~~~~~~~y~aPE~~----~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 890 (952)
.... ......||+.|+|||++ .+..++.++||||||+++|||++|+.||..................+.
T Consensus 177 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~----- 249 (327)
T 3aln_A 177 VDSI--AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQ----- 249 (327)
T ss_dssp -------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCC-----
T ss_pred cccc--ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCC-----
Confidence 4332 22234689999999988 456789999999999999999999999865322111111111111000
Q ss_pred cccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 891 DTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
+. ......+++++.+++.+||+.||++||++.|++++
T Consensus 250 ---~~-------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 250 ---LS-------NSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp ---CC-------CCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred ---CC-------CcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 00 00112356789999999999999999999999874
No 265
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.6e-36 Score=339.08 Aligned_cols=275 Identities=21% Similarity=0.271 Sum_probs=192.9
Q ss_pred HHHHHHhccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEeecCC--
Q 002214 657 DELLRATDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSCTNHN-- 733 (952)
Q Consensus 657 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-- 733 (952)
.......++|++.+.||+|+||.||+|++ .+|+.||||++.... .....+.+|++.++.++||||+++++++...+
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 45567788999999999999999999998 468999999885443 23356678888899999999999999986533
Q ss_pred -----eeEEEEEccCCCChhHHhh---hcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCC-CCcEE
Q 002214 734 -----FKALVLEYMPKGSLEDCMY---ASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDD-SMVAH 804 (952)
Q Consensus 734 -----~~~lv~e~~~~g~L~~~l~---~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~-~~~~k 804 (952)
..++||||+++ ++...+. .....+++..+..++.|++.|++||| .|++||+||||||+||+++. ++.+|
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH-~~~~~ivH~Dlkp~NIll~~~~~~~k 172 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLH-LPSVNVCHRDIKPHNVLVNEADGTLK 172 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHT-STTTCCBCSCCCGGGEEEETTTTEEE
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHh-CCCCCeecCcCCHHHEEEeCCCCcEE
Confidence 27899999976 5544433 23446899999999999999999993 13999999999999999996 89999
Q ss_pred EeccccccccCCcCcccccccccccccccccccCcC-CcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhc---
Q 002214 805 LSDFGIAKLLSEEDSMKQTQTLATIGYIAPEYGREG-QVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWIN--- 880 (952)
Q Consensus 805 l~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~--- 880 (952)
|+|||+|+....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||...... ..+..+..
T Consensus 173 l~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~-~~~~~~~~~~~ 249 (360)
T 3e3p_A 173 LCDFGSAKKLSPSEP--NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA-GQLHEIVRVLG 249 (360)
T ss_dssp ECCCTTCBCCCTTSC--CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHC
T ss_pred EeeCCCceecCCCCC--cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH-HHHHHHHHHcC
Confidence 999999987654332 2345689999999988654 4899999999999999999999998653211 11111111
Q ss_pred cchhhhhhhccccccch---------hhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 881 DSLPAVMNIMDTNLLSE---------DEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 881 ~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
....+....++...... ...........+++++.+++.+||+.||++|||+.|++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 250 CPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp CCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 11111111111100000 0000011112357889999999999999999999999875
No 266
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=3.7e-37 Score=336.93 Aligned_cols=253 Identities=22% Similarity=0.362 Sum_probs=198.4
Q ss_pred HHhccCCccceecCccceEEEEEEeCCCcEEEEEEeeccC--chhhHHHHHHHHHHHhCC--CCccceeeeEeecCCeeE
Q 002214 661 RATDQFSEENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQR--EGALNSFDAECEILKTIR--HRNLVKIISSCTNHNFKA 736 (952)
Q Consensus 661 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~ 736 (952)
...++|++.+.||+|+||.||+|.+.+++.||||++.... ....+.+.+|++++++++ ||||+++++++..++..+
T Consensus 25 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~ 104 (313)
T 3cek_A 25 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 104 (313)
T ss_dssp ETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEE
T ss_pred eccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEE
Confidence 3456899999999999999999999889999999986543 334577899999999997 599999999999999999
Q ss_pred EEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCC
Q 002214 737 LVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSE 816 (952)
Q Consensus 737 lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~ 816 (952)
+||| +.+++|.+++.... .+++..+..++.|+++||+|| |++||+||||||+||++++ +.+||+|||+++....
T Consensus 105 lv~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~ 178 (313)
T 3cek_A 105 MVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTI---HQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQP 178 (313)
T ss_dssp EEEC-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEEET-TEEEECCCSSSCC---
T ss_pred EEEe-cCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCceecCCCcccEEEEC-CeEEEeeccccccccC
Confidence 9999 55889999987654 689999999999999999999 7889999999999999964 8999999999987654
Q ss_pred cCcc-cccccccccccccccccCc-----------CCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchh
Q 002214 817 EDSM-KQTQTLATIGYIAPEYGRE-----------GQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLP 884 (952)
Q Consensus 817 ~~~~-~~~~~~~~~~y~aPE~~~~-----------~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 884 (952)
.... ......|++.|+|||.+.+ ..++.++||||||+++|||++|+.||.........
T Consensus 179 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~---------- 248 (313)
T 3cek_A 179 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK---------- 248 (313)
T ss_dssp -----------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHH----------
T ss_pred ccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHH----------
Confidence 3221 1223568999999998765 46888999999999999999999998653221111
Q ss_pred hhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 885 AVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 885 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
....++...... .+..++.++.+++.+||+.||++||++.|++++
T Consensus 249 -~~~~~~~~~~~~-------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 249 -LHAIIDPNHEIE-------FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp -HHHHHCTTSCCC-------CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -HHHHHhcccccC-------CcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 111111111100 112335679999999999999999999999875
No 267
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=4.8e-36 Score=357.50 Aligned_cols=136 Identities=24% Similarity=0.295 Sum_probs=87.8
Q ss_pred ccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEccCccccCccccccccccccc
Q 002214 442 FWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNKLQGPIPESFGELVSLE 521 (952)
Q Consensus 442 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 521 (952)
+..+++|+.|+|++|.+++..|..|..+++|+.|+|++|++++ +|..+..+++|+.|+|++|+++ .+|..+..+++|+
T Consensus 250 l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~ 327 (597)
T 3oja_B 250 LLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLE 327 (597)
T ss_dssp GGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCS
T ss_pred hccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCC
Confidence 3333444444444444443444444445555555555555553 3445566777888888888877 4666677788888
Q ss_pred EEeCCCCcccccCccchhcccccccccccccccccCCCCCCCcccccccccccCccCCCCCc
Q 002214 522 FLDLSNNDLSGVIPASLEKLLYLKSLNLSFNKLVGEIPRGGAFANFSAESFIGNDLLCGSPY 583 (952)
Q Consensus 522 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~p~ 583 (952)
.|+|++|.|++.. +..+++|+.|++++|+|.|.++. ..+..+....+.+++..|+.+.
T Consensus 328 ~L~L~~N~l~~~~---~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~C~~~~ 385 (597)
T 3oja_B 328 NLYLDHNSIVTLK---LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKIDY 385 (597)
T ss_dssp EEECCSSCCCCCC---CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCCCCCTTC
T ss_pred EEECCCCCCCCcC---hhhcCCCCEEEeeCCCCCChhHH-HHHHHHhhhccccccccCCcch
Confidence 8888888887542 55677888888888888887643 3456666677788888998763
No 268
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=5e-36 Score=338.66 Aligned_cols=337 Identities=21% Similarity=0.221 Sum_probs=217.9
Q ss_pred CCccceEEcccCcccccCCccccCCCCCcEEEccCCcccccCCccccccCCccEEEeeCCcCCccCchhhhccCCCcEee
Q 002214 154 LPRLKGLYVSYNQFKGPIPNNLWHCKELSSVSLSYNQFTGRLPRDLGNSTKLKSLDLGFNNLNGEIPQEIGNLRNLEILG 233 (952)
Q Consensus 154 l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 233 (952)
+++++.|++++|.++...+..|..+++|+.|+|++|.+++..+..|+.+++|++|+|++|.+++..|..|+.+++|++|+
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 45666666666666643333355666666666666666655555666666666666666666655555566666666666
Q ss_pred eccccccccCCccccCCCCccEEEeeCccccccCCCCcccCCCCCcceEEcccCcCCCCCCcccccchhhhhhhccccCc
Q 002214 234 IDQSNLVGFVPDTIFNISTLKILSLFNNTLSGNLPSSKNLIGLPNLEGLNLGLNNLSGSIPSFFFNASKLYALELGYNSN 313 (952)
Q Consensus 234 L~~n~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l~l~~~~~ 313 (952)
+++|++..+.+..|.++++|++|++++|.+++..+. .+..+++|++|++++|+++
T Consensus 124 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~~~l~~L~~L~l~~n~l~----------------------- 178 (390)
T 3o6n_A 124 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDD--TFQATTSLQNLQLSSNRLT----------------------- 178 (390)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTT--TTSSCTTCCEEECCSSCCS-----------------------
T ss_pred CCCCccCcCCHHHhcCCCCCcEEECCCCccCccChh--hccCCCCCCEEECCCCcCC-----------------------
Confidence 666666555444455555566666655555543222 2344444555555544443
Q ss_pred cccccccCcceeechhhHHHHHHHhhccccccccCCCcccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCcc
Q 002214 314 LKRLGLERNYLTFSTSELMSLFSALVNCKSLKIGNLINLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQE 393 (952)
Q Consensus 314 L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~ 393 (952)
+. .+..+++|+.|++++|.+++
T Consensus 179 --------------------------------------------------~~---~~~~l~~L~~L~l~~n~l~~----- 200 (390)
T 3o6n_A 179 --------------------------------------------------HV---DLSLIPSLFHANVSYNLLST----- 200 (390)
T ss_dssp --------------------------------------------------BC---CGGGCTTCSEEECCSSCCSE-----
T ss_pred --------------------------------------------------cc---ccccccccceeecccccccc-----
Confidence 22 12333444444444444432
Q ss_pred ccCCCcceEEEeccccccccCCCccCCCCCCcEEeccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccc
Q 002214 394 FCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLRILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVV 473 (952)
Q Consensus 394 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 473 (952)
+...++|+.|++++|.+... |. ...++|+.|++++|++++. ..+..+++|+.|++++|.+++..|..|..+++|+
T Consensus 201 ~~~~~~L~~L~l~~n~l~~~-~~--~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 275 (390)
T 3o6n_A 201 LAIPIAVEELDASHNSINVV-RG--PVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLE 275 (390)
T ss_dssp EECCSSCSEEECCSSCCCEE-EC--CCCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCC
T ss_pred cCCCCcceEEECCCCeeeec-cc--cccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCC
Confidence 11223455555555555532 22 1235677777777777653 4677777788888888877777777788888888
Q ss_pred eeecCCcccCCCCcccccCCCCCceEEccCccccCcccccccccccccEEeCCCCcccccCccchhcccccccccccccc
Q 002214 474 DIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNKLQGPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFNK 553 (952)
Q Consensus 474 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~ 553 (952)
.|+|++|++++ +|..+..+++|++|+|++|+++ .+|..+..+++|+.|+|++|+|+.. | +..+++|+.|++++|+
T Consensus 276 ~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~ 350 (390)
T 3o6n_A 276 RLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHND 350 (390)
T ss_dssp EEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSC
T ss_pred EEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCcccee-C--chhhccCCEEEcCCCC
Confidence 88888888874 4666678899999999999998 4666788889999999999999855 3 6778899999999999
Q ss_pred cccCCCCCCCcccccccccccCccCCCCCcc
Q 002214 554 LVGEIPRGGAFANFSAESFIGNDLLCGSPYL 584 (952)
Q Consensus 554 l~~~~p~~~~~~~~~~~~~~~n~~~c~~p~~ 584 (952)
|.|.+.. ..+..+....+.+++..|+++..
T Consensus 351 ~~~~~~~-~~~~~~~~~~~~~~~~~c~~~~~ 380 (390)
T 3o6n_A 351 WDCNSLR-ALFRNVARPAVDDADQHCKIDYQ 380 (390)
T ss_dssp EEHHHHH-HHTTTCCTTTBCCCCSCCCTTCE
T ss_pred ccchhHH-HHHHHHHhhcccccCceeccccc
Confidence 9987543 34566666777888888987743
No 269
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=9.2e-37 Score=346.85 Aligned_cols=264 Identities=24% Similarity=0.334 Sum_probs=195.8
Q ss_pred hccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEeecC------Cee
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSCTNH------NFK 735 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~ 735 (952)
..+|.+.+.||+|+||.||+|++. +|+.||||++..... ...+|++++++++||||+++++++... ...
T Consensus 53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~ 128 (420)
T 1j1b_A 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 128 (420)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEE
T ss_pred cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeE
Confidence 346899999999999999999984 699999999864432 234799999999999999999988532 246
Q ss_pred EEEEEccCCCChhHHhh---hcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCC-CcEEEeccccc
Q 002214 736 ALVLEYMPKGSLEDCMY---ASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDS-MVAHLSDFGIA 811 (952)
Q Consensus 736 ~lv~e~~~~g~L~~~l~---~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~-~~~kl~Dfgla 811 (952)
++||||+++ ++.+.+. .....+++..+..++.|+++||+|| |++||+||||||+|||++.+ +.+||+|||+|
T Consensus 129 ~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~L---H~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a 204 (420)
T 1j1b_A 129 NLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI---HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSA 204 (420)
T ss_dssp EEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH---HTTTEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred Eeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH---HHCCccccCCChhhEEEeCCCCeEEeccchhh
Confidence 799999975 5655554 2345799999999999999999999 78999999999999999965 67899999999
Q ss_pred cccCCcCcccccccccccccccccccCcC-CcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhc---cchhhhh
Q 002214 812 KLLSEEDSMKQTQTLATIGYIAPEYGREG-QVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWIN---DSLPAVM 887 (952)
Q Consensus 812 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~---~~~~~~~ 887 (952)
+....... .....+|+.|+|||++.+. .++.++|||||||++|||++|+.||...... ..+.+++. ....+..
T Consensus 205 ~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~-~~l~~i~~~lg~p~~~~~ 281 (420)
T 1j1b_A 205 KQLVRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTREQI 281 (420)
T ss_dssp EECCTTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCSCCHHHH
T ss_pred hhcccCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHH
Confidence 87644322 2345789999999988664 7899999999999999999999998653211 11111111 1111100
Q ss_pred hhcccccc----c--hhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 888 NIMDTNLL----S--EDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 888 ~~~~~~~~----~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
..+..... . ....+....+..+++++.+|+.+||..||++||++.|++++
T Consensus 282 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 282 REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp HHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 00111000 0 00001112233457889999999999999999999999864
No 270
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.3e-36 Score=328.28 Aligned_cols=253 Identities=23% Similarity=0.332 Sum_probs=204.0
Q ss_pred HHhccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccC--chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEE
Q 002214 661 RATDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQR--EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKAL 737 (952)
Q Consensus 661 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 737 (952)
...++|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 98 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence 34578999999999999999999985 78999999986543 2345778999999999999999999999999999999
Q ss_pred EEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCC---CcEEEecccccccc
Q 002214 738 VLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDS---MVAHLSDFGIAKLL 814 (952)
Q Consensus 738 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~---~~~kl~Dfgla~~~ 814 (952)
||||+++++|.+.+.... .+++.++..++.|++.||+|| |++||+||||||+||+++.+ +.+||+|||++...
T Consensus 99 v~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~L---H~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~ 174 (287)
T 2wei_A 99 VGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYM---HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (287)
T ss_dssp EECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTB
T ss_pred EEEccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCChhhEEEecCCCcccEEEeccCcceee
Confidence 999999999998887554 689999999999999999999 78899999999999999754 47999999999876
Q ss_pred CCcCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccc
Q 002214 815 SEEDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNL 894 (952)
Q Consensus 815 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 894 (952)
..... .....+++.|+|||.+.+ .++.++||||||+++|+|++|+.||...... ...+ .+.....
T Consensus 175 ~~~~~--~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~----------~~~~~~~ 239 (287)
T 2wei_A 175 QQNTK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY--DILK----------RVETGKY 239 (287)
T ss_dssp CCCSS--CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHH----------HHHHCCC
T ss_pred cCCCc--cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH--HHHH----------HHHcCCC
Confidence 44322 223458999999998875 4889999999999999999999998652111 1100 0000000
Q ss_pred cchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 895 LSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
.... .....+++++.+++.+||+.||++|||+.|++++
T Consensus 240 ~~~~-----~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 240 AFDL-----PQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp CCCS-----GGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred CCCc-----hhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 0000 0113457789999999999999999999999974
No 271
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=2.6e-36 Score=334.37 Aligned_cols=265 Identities=19% Similarity=0.293 Sum_probs=202.2
Q ss_pred hccCCccceecCccceEEEEEEe--CCCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCC------ccceeeeEeecCCe
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRF--PDGIEVAIKVFHLQREGALNSFDAECEILKTIRHR------NLVKIISSCTNHNF 734 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~------niv~l~~~~~~~~~ 734 (952)
.++|++.+.||+|+||+||+|.+ .+++.||||+++.. ....+.+.+|+++++.++|+ +++++++++...+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 45899999999999999999987 36899999998643 23456788999999998765 49999999999999
Q ss_pred eEEEEEccCCCChhHHhhhcC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCC--------------
Q 002214 735 KALVLEYMPKGSLEDCMYASN-FNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDD-------------- 799 (952)
Q Consensus 735 ~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~-------------- 799 (952)
.++||||+ +++|.+++.... ..+++..+..++.|+++||+|| |++||+||||||+||+++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~ 167 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFL---HSNKLTHTDLKPENILFVQSDYTEAYNPKIKRD 167 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHH---HHCCCcCCCCCHHHEEEeccccccccCCccccc
Confidence 99999999 889999887654 3689999999999999999999 7889999999999999987
Q ss_pred -----CCcEEEeccccccccCCcCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccc
Q 002214 800 -----SMVAHLSDFGIAKLLSEEDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMS 874 (952)
Q Consensus 800 -----~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~ 874 (952)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .
T Consensus 168 ~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~ 242 (339)
T 1z57_A 168 ERTLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE-H 242 (339)
T ss_dssp EEEESCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHH-H
T ss_pred cccccCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH-H
Confidence 678999999999865332 233568999999999998899999999999999999999999986532111 0
Q ss_pred hhhhh--ccchhh-hhhh------ccc---cccchhhH------------HHHHhhhhhHHHHHHHHhhccccCCCCCCC
Q 002214 875 IKRWI--NDSLPA-VMNI------MDT---NLLSEDEE------------HANVAKQSCASSVLSLAMECTSESPENRVN 930 (952)
Q Consensus 875 ~~~~~--~~~~~~-~~~~------~~~---~~~~~~~~------------~~~~~~~~~~~~l~~li~~cl~~dP~~RPs 930 (952)
..... ....+. .... +.. ........ ........+++++.+++.+||+.||++|||
T Consensus 243 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt 322 (339)
T 1z57_A 243 LAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRIT 322 (339)
T ss_dssp HHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCC
T ss_pred HHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccC
Confidence 00000 000000 0000 000 00000000 000012345788999999999999999999
Q ss_pred HHHHHHH
Q 002214 931 TKEIISR 937 (952)
Q Consensus 931 ~~ev~~~ 937 (952)
+.|++++
T Consensus 323 ~~ell~h 329 (339)
T 1z57_A 323 LREALKH 329 (339)
T ss_dssp HHHHTTS
T ss_pred HHHHhcC
Confidence 9999865
No 272
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=1.1e-36 Score=339.13 Aligned_cols=263 Identities=20% Similarity=0.256 Sum_probs=196.7
Q ss_pred hccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccC--chhhHHHHHHHHHHHhCCCCccceeeeEeecCCe-----
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQR--EGALNSFDAECEILKTIRHRNLVKIISSCTNHNF----- 734 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 734 (952)
.++|.+.+.||+|+||.||+|.+ .+|+.||||++.... ....+.+.+|+.++++++||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 45799999999999999999987 469999999986542 3335678899999999999999999999987653
Q ss_pred -eEEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccc
Q 002214 735 -KALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKL 813 (952)
Q Consensus 735 -~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~ 813 (952)
.++||||++ ++|.+++.. .+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||+++.
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~L---H~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL---KFSEEKIQYLVYQMLKGLKYI---HSAGVVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS---CCCHHHHHHHHHHHHHHHHHH---HHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred eEEEEecccc-CCHHHHhcC---CCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEeECCCCcEEEeecccccC
Confidence 499999997 588877643 489999999999999999999 788999999999999999999999999999986
Q ss_pred cCCcCcccccccccccccccccccCc-CCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhc---cchhhhhhh
Q 002214 814 LSEEDSMKQTQTLATIGYIAPEYGRE-GQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWIN---DSLPAVMNI 889 (952)
Q Consensus 814 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~---~~~~~~~~~ 889 (952)
.... .....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||......+ .+..... ....+....
T Consensus 176 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~ 250 (353)
T 3coi_A 176 ADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGVPGTEFVQK 250 (353)
T ss_dssp ------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHH-HHHHHHHHHCBCCHHHHTT
T ss_pred CCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHHH
Confidence 5322 233568999999998876 678999999999999999999999986532111 1111100 000000000
Q ss_pred ccc--------cccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 890 MDT--------NLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 890 ~~~--------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
+.. ................+++++.+++.+||+.||++|||++|++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 251 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp CSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 000 000000000001123457889999999999999999999999864
No 273
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=4.7e-37 Score=336.82 Aligned_cols=244 Identities=25% Similarity=0.314 Sum_probs=201.0
Q ss_pred HHHhccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccCch------hhHHHHHHHHHHHhCC--CCccceeeeEee
Q 002214 660 LRATDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQREG------ALNSFDAECEILKTIR--HRNLVKIISSCT 730 (952)
Q Consensus 660 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--h~niv~l~~~~~ 730 (952)
....++|++.+.||+|+||.||+|++ .+++.||||++...... ..+.+.+|+.++++++ |||++++++++.
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~ 118 (320)
T 3a99_A 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118 (320)
T ss_dssp -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence 34567899999999999999999987 57899999998654321 2245678999999996 599999999999
Q ss_pred cCCeeEEEEEccCC-CChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeC-CCCcEEEecc
Q 002214 731 NHNFKALVLEYMPK-GSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLD-DSMVAHLSDF 808 (952)
Q Consensus 731 ~~~~~~lv~e~~~~-g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~-~~~~~kl~Df 808 (952)
.++..++|||++.+ ++|.+++.... .+++..+..++.|+++||+|| |++||+||||||+||+++ .++.+||+||
T Consensus 119 ~~~~~~lv~e~~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dlkp~NIll~~~~~~~kL~Df 194 (320)
T 3a99_A 119 RPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHC---HNCGVLHRDIKDENILIDLNRGELKLIDF 194 (320)
T ss_dssp CSSEEEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEEETTTTEEEECCC
T ss_pred cCCcEEEEEEcCCCCccHHHHHhccC-CCCHHHHHHHHHHHHHHHHHH---HHCCcEeCCCCHHHEEEeCCCCCEEEeeC
Confidence 99999999999976 89999987644 689999999999999999999 789999999999999999 7899999999
Q ss_pred ccccccCCcCcccccccccccccccccccCcCCc-CcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhh
Q 002214 809 GIAKLLSEEDSMKQTQTLATIGYIAPEYGREGQV-SIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVM 887 (952)
Q Consensus 809 gla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 887 (952)
|+++...... .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||.... ....
T Consensus 195 g~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-------~~~~------- 257 (320)
T 3a99_A 195 GSGALLKDTV---YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------EIIR------- 257 (320)
T ss_dssp TTCEECCSSC---BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------HHHH-------
T ss_pred cccccccccc---ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh-------hhhc-------
Confidence 9998765332 233568999999998876665 688999999999999999999985421 0000
Q ss_pred hhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 888 NIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 888 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
... ..+..+++++.+++.+||+.||++|||+.|++++
T Consensus 258 ----~~~---------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 258 ----GQV---------FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp ----CCC---------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ----ccc---------cccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 0112356789999999999999999999999874
No 274
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.7e-35 Score=334.19 Aligned_cols=347 Identities=16% Similarity=0.198 Sum_probs=193.0
Q ss_pred cccCCCCCCCC-CceEEEeCCCCeEEEEEecCCCCcccCCccccCCcccCeeeccccccccccCC-CcCCcCCCcEEeCc
Q 002214 12 QNWTSNASVCS-WMGITCDVYGNRVTSLTISDLGLAGTIPSHLGNLSSLQTLVLSRNWFSGTIPK-EIGNLTKLKELHLD 89 (952)
Q Consensus 12 ~~~~~~~~~c~-w~~v~c~~~~~~~~~l~l~~~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~-~l~~l~~L~~L~L~ 89 (952)
++|.++.+||. |.+..|...+..+ +-..... .....-..+++++.|++++|.++ .+|. .+..+++|++|+|+
T Consensus 4 ~~~~~~~~C~~~~~~~~c~~~~~~i---~~~~~~~--~~~~~~~~l~~l~~l~l~~~~l~-~l~~~~~~~l~~L~~L~L~ 77 (390)
T 3o6n_A 4 KPRQPEYKCIDSNLQYDCVFYDVHI---DMQTQDV--YFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLN 77 (390)
T ss_dssp ---CCEECBCC------EEEESCEE---CSSCCCC--EESCSSGGGCCCSEEEEESCEES-EECTHHHHHCCCCSEEECT
T ss_pred CCCCCccceehhhhhhccceeeeee---ecccccc--cccccccccCCceEEEecCCchh-hCChhHhcccccCcEEECC
Confidence 47987778887 4444454322111 1122222 11222234678888999888888 4554 46788888889998
Q ss_pred CCcccccCChhhcCCCCCCeEeecCccCccccCcccccccccccceeeccccccccCCCCCCCCCCccceEEcccCcccc
Q 002214 90 YNKLQGEIPEELGNLAELEMLVLNNNLLTGTIPASIFNLSFISTALDFSDNSLTGSFPYDMCPGLPRLKGLYVSYNQFKG 169 (952)
Q Consensus 90 ~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~l~~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~ 169 (952)
+|.+.+..+.+|+++++|++|+|++|.+++..|. .+.++++|++|+|++|+++.
T Consensus 78 ~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--------------------------~~~~l~~L~~L~L~~n~l~~ 131 (390)
T 3o6n_A 78 DLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPH--------------------------VFQNVPLLTVLVLERNDLSS 131 (390)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTT--------------------------TTTTCTTCCEEECCSSCCCC
T ss_pred CCcccccChhhccCCCCcCEEECCCCCCCcCCHH--------------------------HhcCCCCCCEEECCCCccCc
Confidence 8888876677888888888888888887733333 23455677777777777774
Q ss_pred cCCccccCCCCCcEEEccCCcccccCCccccccCCccEEEeeCCcCCccCchhhhccCCCcEeeeccccccccCCccccC
Q 002214 170 PIPNNLWHCKELSSVSLSYNQFTGRLPRDLGNSTKLKSLDLGFNNLNGEIPQEIGNLRNLEILGIDQSNLVGFVPDTIFN 249 (952)
Q Consensus 170 ~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~ 249 (952)
..+..|..+++|++|++++|++++..|..|+.+++|++|++++|++++. .+..+++|+.|++++|.+.+. ..
T Consensus 132 l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~~-----~~ 203 (390)
T 3o6n_A 132 LPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLSTL-----AI 203 (390)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSEE-----EC
T ss_pred CCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccccccc-----CC
Confidence 3334456677777777777777766666677777777777777777643 244555555565555544432 12
Q ss_pred CCCccEEEeeCccccccCCCCcccCCCCCcceEEcccCcCCCCCCcccccchhhhhhhccccCccccccccCcceeechh
Q 002214 250 ISTLKILSLFNNTLSGNLPSSKNLIGLPNLEGLNLGLNNLSGSIPSFFFNASKLYALELGYNSNLKRLGLERNYLTFSTS 329 (952)
Q Consensus 250 l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l~l~~~~~L~~L~L~~n~l~~~~~ 329 (952)
.++|+.|++++|.+... +. ...++|
T Consensus 204 ~~~L~~L~l~~n~l~~~-~~----~~~~~L-------------------------------------------------- 228 (390)
T 3o6n_A 204 PIAVEELDASHNSINVV-RG----PVNVEL-------------------------------------------------- 228 (390)
T ss_dssp CSSCSEEECCSSCCCEE-EC----CCCSSC--------------------------------------------------
T ss_pred CCcceEEECCCCeeeec-cc----cccccc--------------------------------------------------
Confidence 23455555555554422 11 112344
Q ss_pred hHHHHHHHhhccccccccCCCcccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCccccCCCcceEEEecccc
Q 002214 330 ELMSLFSALVNCKSLKIGNLINLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNK 409 (952)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~ 409 (952)
+.|++++|.+++. ..+..+++|++|++++|.+++..|..|..+++|+.|+|++|+
T Consensus 229 -----------------------~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~ 283 (390)
T 3o6n_A 229 -----------------------TILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNR 283 (390)
T ss_dssp -----------------------CEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSC
T ss_pred -----------------------cEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCc
Confidence 4444444444422 234444445555555554444444444445555555555555
Q ss_pred ccccCCCccCCCCCCcEEeccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccC
Q 002214 410 LSGSIPSCLGDLNSLRILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLS 483 (952)
Q Consensus 410 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 483 (952)
+++ +|..+..+++|++|++++|++++ .|..+..+++|+.|++++|+++.. + +..+++|+.|++++|++.
T Consensus 284 l~~-~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~ 352 (390)
T 3o6n_A 284 LVA-LNLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWD 352 (390)
T ss_dssp CCE-EECSSSCCTTCCEEECCSSCCCC-CGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEE
T ss_pred Ccc-cCcccCCCCCCCEEECCCCccee-cCccccccCcCCEEECCCCcccee-C--chhhccCCEEEcCCCCcc
Confidence 442 33334455555555555555553 233345555555555555555532 1 445555666666666655
No 275
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=6.4e-36 Score=336.33 Aligned_cols=199 Identities=26% Similarity=0.352 Sum_probs=171.4
Q ss_pred HhccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccCchhhHHHHHHHHHHHhCC-CC-----ccceeeeEeecCCe
Q 002214 662 ATDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQREGALNSFDAECEILKTIR-HR-----NLVKIISSCTNHNF 734 (952)
Q Consensus 662 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~~~~~~~~~ 734 (952)
..++|++.+.||+|+||+||+|++. +++.||||+++.. ......+..|+++++.++ |+ +++++++++...+.
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 130 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH 130 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc
Confidence 4578999999999999999999874 6889999998643 233467788999998885 55 49999999999999
Q ss_pred eEEEEEccCCCChhHHhhhcC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeC--CCCcEEEeccccc
Q 002214 735 KALVLEYMPKGSLEDCMYASN-FNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLD--DSMVAHLSDFGIA 811 (952)
Q Consensus 735 ~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~--~~~~~kl~Dfgla 811 (952)
.++||||++ |+|.+++.... ..+++..+..++.|++.||+|||. |+.||+||||||+||+++ .++.+||+|||+|
T Consensus 131 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~-~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a 208 (382)
T 2vx3_A 131 LCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT-PELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 208 (382)
T ss_dssp EEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTS-TTTCEECCCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred eEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhcc-CCCCEEcCCCCcccEEEecCCCCcEEEEeccCc
Confidence 999999995 59999887654 468999999999999999999952 378999999999999994 5788999999999
Q ss_pred cccCCcCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCc
Q 002214 812 KLLSEEDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNE 867 (952)
Q Consensus 812 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~ 867 (952)
+..... .....+|+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 209 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~ 260 (382)
T 2vx3_A 209 CQLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG 260 (382)
T ss_dssp EETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred eecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 876432 2335689999999999998999999999999999999999999975
No 276
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.6e-36 Score=334.85 Aligned_cols=253 Identities=20% Similarity=0.277 Sum_probs=175.0
Q ss_pred HhccCCccc-eecCccceEEEEEEeC-CCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeEeec----CCee
Q 002214 662 ATDQFSEEN-LIGIGSYGSVYKGRFP-DGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISSCTN----HNFK 735 (952)
Q Consensus 662 ~~~~~~~~~-~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~ 735 (952)
..++|.+.+ .||+|+||+||+|++. +|+.||||++.... ....+....++.++||||+++++++.. ....
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 101 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL 101 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence 456888855 6999999999999985 69999999986432 112223334566799999999999876 4568
Q ss_pred EEEEEccCCCChhHHhhhcC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCC---CCcEEEeccccc
Q 002214 736 ALVLEYMPKGSLEDCMYASN-FNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDD---SMVAHLSDFGIA 811 (952)
Q Consensus 736 ~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~---~~~~kl~Dfgla 811 (952)
++||||+++|+|.+++.... ..+++.+++.++.|++.||+|| |++||+||||||+||+++. ++.+||+|||++
T Consensus 102 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~L---H~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~ 178 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFL---HSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFA 178 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEEecCCCceEEEeccccc
Confidence 99999999999999998654 3699999999999999999999 7889999999999999976 455999999999
Q ss_pred cccCCcCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhcc
Q 002214 812 KLLSEEDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMD 891 (952)
Q Consensus 812 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 891 (952)
+...... .....+|+.|+|||++.+..++.++||||||+++|+|++|+.||........... ... .. ..
T Consensus 179 ~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~-~~~----~~---~~ 247 (336)
T 3fhr_A 179 KETTQNA---LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPG-MKR----RI---RL 247 (336)
T ss_dssp EEC-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC--------------------------
T ss_pred eeccccc---cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhh-HHH----hh---hc
Confidence 8654322 2335689999999999888899999999999999999999999865322211000 000 00 00
Q ss_pred ccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 892 TNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
..... .......+++++.+++.+||+.||++|||+.|++++
T Consensus 248 ~~~~~-----~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 248 GQYGF-----PNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp ---CC-----CTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred ccccc-----CchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 00000 000113457789999999999999999999999974
No 277
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.2e-36 Score=333.80 Aligned_cols=252 Identities=21% Similarity=0.318 Sum_probs=183.4
Q ss_pred hccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccCch--hhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEEE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQREG--ALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALVL 739 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 739 (952)
.++|++.+.||+|+||.||+|++. +|+.||||++...... ..+.+.++..+++.++||||+++++++.+++..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 467899999999999999999984 7999999999755332 2234455556788889999999999999999999999
Q ss_pred EccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEeCCCCCCCeeeCCCCcEEEeccccccccCCcC
Q 002214 740 EYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSN-PIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEED 818 (952)
Q Consensus 740 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~-~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 818 (952)
||+ ++.+..+.......+++..+..++.|+++||+|| |++ ||+||||||+||+++.++.+||+|||++.......
T Consensus 104 e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYL---KEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179 (318)
T ss_dssp CCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHH---HHHHCCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred ecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHH---HhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc
Confidence 999 5666666655556799999999999999999999 564 99999999999999999999999999998664332
Q ss_pred cccccccccccccccccccC-----cCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhcccc
Q 002214 819 SMKQTQTLATIGYIAPEYGR-----EGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTN 893 (952)
Q Consensus 819 ~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 893 (952)
......+++.|+|||++. ...++.++||||||+++|||++|+.||.................. ..
T Consensus 180 --~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~--------~~ 249 (318)
T 2dyl_A 180 --AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEP--------PL 249 (318)
T ss_dssp ---------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCC--------CC
T ss_pred --cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCC--------CC
Confidence 223356899999999884 456888999999999999999999998653221111111111000 00
Q ss_pred ccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 894 LLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
. . ....++.++.+++.+||+.||++||++.|++++
T Consensus 250 ~-~--------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 250 L-P--------GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp C-C--------SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred C-C--------ccCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 0 0 012356789999999999999999999999875
No 278
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=1.6e-36 Score=340.87 Aligned_cols=266 Identities=17% Similarity=0.283 Sum_probs=199.0
Q ss_pred hccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccCchhhHHHHHHHHHHHhCC-----------CCccceeeeEee
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQREGALNSFDAECEILKTIR-----------HRNLVKIISSCT 730 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~~~~ 730 (952)
.++|.+.+.||+|+||+||+|++ .+++.||||++.... ...+.+.+|+.++++++ ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 45799999999999999999997 578999999986432 33467889999999886 899999999987
Q ss_pred cCC----eeEEEEEccCCCChhHHhhhcC-CCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEeCCCCCCCeeeC------
Q 002214 731 NHN----FKALVLEYMPKGSLEDCMYASN-FNLDIFQRLGIMIDVASALEYLHFGHSN-PIVHCDIKPSNVLLD------ 798 (952)
Q Consensus 731 ~~~----~~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~Lh~~h~~-~ivH~Dlk~~Nill~------ 798 (952)
..+ ..++||||+ +++|.+++.... ..+++..+..++.|++.||+|| |++ ||+||||||+||+++
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~l---H~~~~ivH~Dikp~NIll~~~~~~~ 172 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYM---HRRCGIIHTDIKPENVLMEIVDSPE 172 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHH---HHTTCEECSCCSGGGEEEEEEETTT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHH---HhcCCEEecCCChHHeEEeccCCCc
Confidence 654 789999999 889999987643 3599999999999999999999 677 999999999999994
Q ss_pred CCCcEEEeccccccccCCcCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCcc-----
Q 002214 799 DSMVAHLSDFGIAKLLSEEDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEM----- 873 (952)
Q Consensus 799 ~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~----- 873 (952)
..+.+||+|||+|+..... .....+|+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 173 ~~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~ 248 (373)
T 1q8y_A 173 NLIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDD 248 (373)
T ss_dssp TEEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHH
T ss_pred CcceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHH
Confidence 4458999999999876432 2335689999999999988999999999999999999999999975332111
Q ss_pred chhhhhc--cchhh-h-------hhhccc-cc--------cc---hhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCH
Q 002214 874 SIKRWIN--DSLPA-V-------MNIMDT-NL--------LS---EDEEHANVAKQSCASSVLSLAMECTSESPENRVNT 931 (952)
Q Consensus 874 ~~~~~~~--~~~~~-~-------~~~~~~-~~--------~~---~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 931 (952)
...+... +..+. . ...+.. .. .. .........+..+++++.+++.+||+.||++|||+
T Consensus 249 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 328 (373)
T 1q8y_A 249 HIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADA 328 (373)
T ss_dssp HHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCH
T ss_pred HHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCH
Confidence 0111000 00000 0 000000 00 00 00000011234678899999999999999999999
Q ss_pred HHHHHH
Q 002214 932 KEIISR 937 (952)
Q Consensus 932 ~ev~~~ 937 (952)
+|++++
T Consensus 329 ~ell~h 334 (373)
T 1q8y_A 329 GGLVNH 334 (373)
T ss_dssp HHHHTC
T ss_pred HHHhhC
Confidence 999874
No 279
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1.6e-36 Score=346.44 Aligned_cols=251 Identities=24% Similarity=0.361 Sum_probs=187.4
Q ss_pred ccCCccceecCccceEEEEEEeCCCcEEEEEEeeccCchhhHHHHHHHHHHHhC-CCCccceeeeEeecCCeeEEEEEcc
Q 002214 664 DQFSEENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQREGALNSFDAECEILKTI-RHRNLVKIISSCTNHNFKALVLEYM 742 (952)
Q Consensus 664 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~ 742 (952)
+.|...+.||+|+||+||.+...+|+.||||++..+. .+.+.+|+.+++++ +||||+++++++.+++..++||||+
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~ 91 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC 91 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecC
Confidence 3456678899999999987766789999999986543 35678999999886 8999999999999999999999999
Q ss_pred CCCChhHHhhhcCCC------CCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCC-------------CcE
Q 002214 743 PKGSLEDCMYASNFN------LDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDS-------------MVA 803 (952)
Q Consensus 743 ~~g~L~~~l~~~~~~------l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~-------------~~~ 803 (952)
+ |+|.+++...... .++..++.++.||+.||+|| |++||+||||||+||+++.+ +.+
T Consensus 92 ~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~ 167 (434)
T 2rio_A 92 N-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL---HSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 167 (434)
T ss_dssp S-EEHHHHHHTC------------CCHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEE
T ss_pred C-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHH---HHCCccccCCChHhEEEecCcccccccccCCCceEE
Confidence 5 6999998765421 12334578999999999999 78899999999999999754 489
Q ss_pred EEeccccccccCCcCcc---cccccccccccccccccCc-------CCcCcccchHhHHHHHHHHHh-CCCCCCccccCc
Q 002214 804 HLSDFGIAKLLSEEDSM---KQTQTLATIGYIAPEYGRE-------GQVSIKGDVYNYGIMLMEVFT-GMKPTNEFFTGE 872 (952)
Q Consensus 804 kl~Dfgla~~~~~~~~~---~~~~~~~~~~y~aPE~~~~-------~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~ 872 (952)
||+|||+|+........ ......||+.|+|||++.+ ..++.++|||||||++|||++ |+.||......+
T Consensus 168 kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~ 247 (434)
T 2rio_A 168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 247 (434)
T ss_dssp EECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH
T ss_pred EEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH
Confidence 99999999977543321 1223579999999998865 578999999999999999999 999986532211
Q ss_pred cchhhhhccchhhhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 873 MSIKRWINDSLPAVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 873 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
. .+... ....... ....+..+++++.+++.+||+.||++|||+.||+++
T Consensus 248 ~---~i~~~-------~~~~~~~------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 296 (434)
T 2rio_A 248 S---NIIRG-------IFSLDEM------KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 296 (434)
T ss_dssp H---HHHHT-------CCCCCCC------TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred H---HHhcC-------CCCcccc------cccccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence 1 11100 0000000 000123457889999999999999999999999863
No 280
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=8.8e-37 Score=333.86 Aligned_cols=245 Identities=26% Similarity=0.359 Sum_probs=192.7
Q ss_pred HHHHhccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccCc------hhhHHHHHHHHHHHhC----CCCccceeee
Q 002214 659 LLRATDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQRE------GALNSFDAECEILKTI----RHRNLVKIIS 727 (952)
Q Consensus 659 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l----~h~niv~l~~ 727 (952)
.....++|++.+.||+|+||.||+|++ .+++.||||++..... .....+.+|+.+++++ +||||+++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 345567899999999999999999987 4689999999865432 1223456799999998 8999999999
Q ss_pred EeecCCeeEEEEEc-cCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeC-CCCcEEE
Q 002214 728 SCTNHNFKALVLEY-MPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLD-DSMVAHL 805 (952)
Q Consensus 728 ~~~~~~~~~lv~e~-~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~-~~~~~kl 805 (952)
++...+..++|||| +.+++|.+++.... .+++..++.++.|+++||+|| |++||+||||||+||+++ .++.+||
T Consensus 106 ~~~~~~~~~~v~e~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~~kl 181 (312)
T 2iwi_A 106 WFETQEGFMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQHC---HSRGVVHRDIKDENILIDLRRGCAKL 181 (312)
T ss_dssp EC-----CEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHH---HHHTEECCCCSGGGEEEETTTTEEEE
T ss_pred EEecCCeEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeeecCCChhhEEEeCCCCeEEE
Confidence 99999999999999 78999999997654 689999999999999999999 688999999999999999 8999999
Q ss_pred eccccccccCCcCcccccccccccccccccccCcCCc-CcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchh
Q 002214 806 SDFGIAKLLSEEDSMKQTQTLATIGYIAPEYGREGQV-SIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLP 884 (952)
Q Consensus 806 ~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 884 (952)
+|||+++...... .....+++.|+|||++.+..+ +.++||||||+++|||++|+.||.... ..
T Consensus 182 ~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-------~~------ 245 (312)
T 2iwi_A 182 IDFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ-------EI------ 245 (312)
T ss_dssp CCCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------HH------
T ss_pred EEcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH-------HH------
Confidence 9999998765432 234568999999998876665 458999999999999999999985421 00
Q ss_pred hhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 885 AVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 885 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
..... ..+..++.++.+++.+||+.||++|||+.|++++
T Consensus 246 -----~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 246 -----LEAEL---------HFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp -----HHTCC---------CCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred -----hhhcc---------CCcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000 0123356779999999999999999999999874
No 281
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.8e-36 Score=344.69 Aligned_cols=250 Identities=21% Similarity=0.351 Sum_probs=189.5
Q ss_pred hccCCccceecCccceEEEEEEeCCCcEEEEEEeeccCchhhHHHHHHHHHHHhC-CCCccceeeeEeecCCeeEEEEEc
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQREGALNSFDAECEILKTI-RHRNLVKIISSCTNHNFKALVLEY 741 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~ 741 (952)
..+|...+.||+|+||+||.....+|+.||||++..... ..+.+|+++++++ +||||+++++++.+....|+||||
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~ 99 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL 99 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence 356889999999999997655556899999999865432 3356899999999 799999999999999999999999
Q ss_pred cCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCC-----CCcEEEeccccccccCC
Q 002214 742 MPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDD-----SMVAHLSDFGIAKLLSE 816 (952)
Q Consensus 742 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~-----~~~~kl~Dfgla~~~~~ 816 (952)
++ |+|.+++........+.++..++.||++||+|| |++||+||||||+||+++. ...+||+|||+|+....
T Consensus 100 ~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~ 175 (432)
T 3p23_A 100 CA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHL---HSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV 175 (432)
T ss_dssp CS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHH---HHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC--
T ss_pred CC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHH---HHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccC
Confidence 96 699999987766666667789999999999999 7899999999999999953 34688999999987653
Q ss_pred cCc--ccccccccccccccccccC---cCCcCcccchHhHHHHHHHHHh-CCCCCCccccCccchhhhhccchhhhhhhc
Q 002214 817 EDS--MKQTQTLATIGYIAPEYGR---EGQVSIKGDVYNYGIMLMEVFT-GMKPTNEFFTGEMSIKRWINDSLPAVMNIM 890 (952)
Q Consensus 817 ~~~--~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 890 (952)
... .......||+.|+|||++. ...++.++|||||||++|||++ |..||....... ....... .
T Consensus 176 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~--~~~~~~~--------~ 245 (432)
T 3p23_A 176 GRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQ--ANILLGA--------C 245 (432)
T ss_dssp ----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHH--HHHHTTC--------C
T ss_pred CCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHH--HHHHhcc--------C
Confidence 321 2233467999999999987 4567889999999999999999 899985421111 0000000 0
Q ss_pred cccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 891 DTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
...... .+...+..+.+++.+||+.||++|||+.||+++
T Consensus 246 ~~~~~~--------~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 246 SLDCLH--------PEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp CCTTSC--------TTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CccccC--------ccccccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 000000 112345668899999999999999999999853
No 282
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=9.5e-36 Score=332.15 Aligned_cols=265 Identities=20% Similarity=0.275 Sum_probs=198.8
Q ss_pred hccCCccceecCccceEEEEEEeC-CC-cEEEEEEeeccCchhhHHHHHHHHHHHhCCCCc------cceeeeEeecCCe
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP-DG-IEVAIKVFHLQREGALNSFDAECEILKTIRHRN------LVKIISSCTNHNF 734 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~~ 734 (952)
.++|++.+.||+|+||+||+|.+. ++ +.||+|+++.. ....+.+.+|+.++++++|++ ++.+++++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 468999999999999999999874 34 78999998643 234567889999999997665 8999999999999
Q ss_pred eEEEEEccCCCChhHHhhhcC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeee----------------
Q 002214 735 KALVLEYMPKGSLEDCMYASN-FNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLL---------------- 797 (952)
Q Consensus 735 ~~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill---------------- 797 (952)
.++||||+ ++++.+.+.... ..+++.++..++.|++.||+|| |++||+||||||+||++
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~l---H~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~ 172 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFL---HENQLTHTDLKPENILFVNSEFETLYNEHKSCE 172 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHH---HTTTEECCCCCGGGEEESCCCEEEEECCC-CCC
T ss_pred EEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEEeccccccccccccccc
Confidence 99999999 566666665543 4699999999999999999999 78999999999999999
Q ss_pred ---CCCCcEEEeccccccccCCcCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccc
Q 002214 798 ---DDSMVAHLSDFGIAKLLSEEDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMS 874 (952)
Q Consensus 798 ---~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~ 874 (952)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .
T Consensus 173 ~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~ 247 (355)
T 2eu9_A 173 EKSVKNTSIRVADFGSATFDHEH----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE-H 247 (355)
T ss_dssp EEEESCCCEEECCCTTCEETTSC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-H
T ss_pred ccccCCCcEEEeecCcccccccc----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH-H
Confidence 56789999999999865332 233568999999999998899999999999999999999999997532211 0
Q ss_pred hhhhh--ccchhh-hhhh-------ccccc--cchhhHHH------------HHhhhhhHHHHHHHHhhccccCCCCCCC
Q 002214 875 IKRWI--NDSLPA-VMNI-------MDTNL--LSEDEEHA------------NVAKQSCASSVLSLAMECTSESPENRVN 930 (952)
Q Consensus 875 ~~~~~--~~~~~~-~~~~-------~~~~~--~~~~~~~~------------~~~~~~~~~~l~~li~~cl~~dP~~RPs 930 (952)
..... ....+. .... ..... ........ .......+.++.+++.+||+.||++|||
T Consensus 248 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt 327 (355)
T 2eu9_A 248 LVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRIT 327 (355)
T ss_dssp HHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCC
T ss_pred HHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcC
Confidence 00000 000000 0000 00000 00000000 0011234668999999999999999999
Q ss_pred HHHHHHH
Q 002214 931 TKEIISR 937 (952)
Q Consensus 931 ~~ev~~~ 937 (952)
+.|++++
T Consensus 328 ~~e~l~h 334 (355)
T 2eu9_A 328 LAEALLH 334 (355)
T ss_dssp HHHHTTS
T ss_pred HHHHhcC
Confidence 9999854
No 283
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=2e-36 Score=353.58 Aligned_cols=264 Identities=22% Similarity=0.304 Sum_probs=198.5
Q ss_pred hccCCccceecCccceEEEEEEe-CCCcEEEEEEeecc-CchhhHHHHHHHHHHHhCCCCccceeeeEeec------CCe
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQ-REGALNSFDAECEILKTIRHRNLVKIISSCTN------HNF 734 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~ 734 (952)
.++|++.+.||+|+||.||+|.+ .+|+.||||+++.. .....+.+.+|++++++++||||+++++++.. .+.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 47899999999999999999987 46899999998654 33345678999999999999999999998765 677
Q ss_pred eEEEEEccCCCChhHHhhhcCC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCc---EEEeccc
Q 002214 735 KALVLEYMPKGSLEDCMYASNF--NLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMV---AHLSDFG 809 (952)
Q Consensus 735 ~~lv~e~~~~g~L~~~l~~~~~--~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~---~kl~Dfg 809 (952)
.++||||+++|+|.+++..... .+++..++.++.|++.||+|| |+.||+||||||+||+++.++. +||+|||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yL---Hs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYL---HENRIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHH---HHTTBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHH---HHCCCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 8999999999999999976442 588999999999999999999 7899999999999999997665 9999999
Q ss_pred cccccCCcCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhh----
Q 002214 810 IAKLLSEEDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPA---- 885 (952)
Q Consensus 810 la~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~---- 885 (952)
.++....... .....||+.|+|||.+.+..++.++|||||||++|||++|..||..... ...|.......
T Consensus 170 ~a~~~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~----~~~~~~~i~~~~~~~ 243 (676)
T 3qa8_A 170 YAKELDQGEL--CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ----PVQWHGKVREKSNEH 243 (676)
T ss_dssp CCCBTTSCCC--CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH----HHHSSTTCC------
T ss_pred cccccccccc--cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc----hhhhhhhhhcccchh
Confidence 9987654332 2345799999999999999999999999999999999999999865211 11111111000
Q ss_pred --hhhhccccccc-hhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHH
Q 002214 886 --VMNIMDTNLLS-EDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEII 935 (952)
Q Consensus 886 --~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~ 935 (952)
..+........ ............+++++.+++..||..||++|||+.|++
T Consensus 244 ~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL 296 (676)
T 3qa8_A 244 IVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNP 296 (676)
T ss_dssp CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCC
T ss_pred hhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHh
Confidence 00000000000 000000112244688899999999999999999998843
No 284
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=5e-34 Score=317.00 Aligned_cols=194 Identities=23% Similarity=0.369 Sum_probs=127.8
Q ss_pred CCCcccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCccCCCCCCcEE
Q 002214 348 NLINLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLRIL 427 (952)
Q Consensus 348 ~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 427 (952)
.+++|++|++++|.+.+..+ +..+++|++|++++|.+.+..+ +..+++|+.|++++|.+.+..+ +..+++|++|
T Consensus 153 ~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L 226 (347)
T 4fmz_A 153 NMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSL 226 (347)
T ss_dssp TCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEE
T ss_pred hCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEE
Confidence 44555566666665553332 5556666666666666653322 5566666666666666664333 5666667777
Q ss_pred eccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEccCcccc
Q 002214 428 SLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNKLQ 507 (952)
Q Consensus 428 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 507 (952)
++++|++++..+ +..+++|+.|++++|.+++. ..+..+++|+.|++++|++++. ..+..+++|+.|+|++|+++
T Consensus 227 ~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~ 300 (347)
T 4fmz_A 227 KIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLG 300 (347)
T ss_dssp ECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCC
T ss_pred EccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCC
Confidence 777777665544 66667777777777776642 3566777777777777777754 35777788888888888887
Q ss_pred CcccccccccccccEEeCCCCcccccCccchhcccccccccccccccc
Q 002214 508 GPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFNKLV 555 (952)
Q Consensus 508 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 555 (952)
+..+..|..+++|+.|+|++|++++..| +..+++|+.|++++|+++
T Consensus 301 ~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 301 NEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp GGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred CcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 7777777788888888888888876655 777788888888888764
No 285
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=2.2e-35 Score=334.75 Aligned_cols=251 Identities=15% Similarity=0.176 Sum_probs=188.8
Q ss_pred hccCCccceecCccceEEEEEEe-CCCcEEEEEEeeccCc---hhhHHHHHHHHHHHhCCC-Ccccee---------e--
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQRE---GALNSFDAECEILKTIRH-RNLVKI---------I-- 726 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h-~niv~l---------~-- 726 (952)
...|...+.||+|+||+||+|++ .+|+.||||+++.... ...+.+.+|+.+++.++| ++.... .
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 34577889999999999999996 5799999999874332 235789999999999987 322111 1
Q ss_pred ----------eEeec-----CCeeEEEEEccCCCChhHHhh------hcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 002214 727 ----------SSCTN-----HNFKALVLEYMPKGSLEDCMY------ASNFNLDIFQRLGIMIDVASALEYLHFGHSNPI 785 (952)
Q Consensus 727 ----------~~~~~-----~~~~~lv~e~~~~g~L~~~l~------~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~i 785 (952)
.++.. ....+++|+++ +++|.+++. .....+++..++.++.|+++||+|| |++||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~~i 232 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASL---HHYGL 232 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHH---HHTTE
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHH---HhCCc
Confidence 11111 12356777776 689998884 2233578889999999999999999 78999
Q ss_pred EeCCCCCCCeeeCCCCcEEEeccccccccCCcCccccccccccccccccccc----------CcCCcCcccchHhHHHHH
Q 002214 786 VHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEEDSMKQTQTLATIGYIAPEYG----------REGQVSIKGDVYNYGIML 855 (952)
Q Consensus 786 vH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~----------~~~~~~~~~Dv~slG~~l 855 (952)
+||||||+|||++.++.+||+|||+|+..... .....| +.|+|||++ ....++.++|||||||++
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil 307 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAI 307 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHH
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHH
Confidence 99999999999999999999999999865432 233567 999999988 556688999999999999
Q ss_pred HHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHH
Q 002214 856 MEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEII 935 (952)
Q Consensus 856 ~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~ 935 (952)
|||++|+.||......+. .. ..+. ....+++++.+++.+||+.||++||++.|++
T Consensus 308 ~elltg~~Pf~~~~~~~~-~~-----------~~~~-------------~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l 362 (413)
T 3dzo_A 308 YWIWCADLPNTDDAALGG-SE-----------WIFR-------------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAM 362 (413)
T ss_dssp HHHHHSSCCCCTTGGGSC-SG-----------GGGS-------------SCCCCCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred HHHHHCCCCCCCcchhhh-HH-----------HHHh-------------hcccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 999999999865321110 00 0000 0113467799999999999999999999998
Q ss_pred HH--HHHHHHHHhh
Q 002214 936 SR--LIKIRDLLFA 947 (952)
Q Consensus 936 ~~--L~~i~~~~~~ 947 (952)
++ ++++.+.+.+
T Consensus 363 ~~~~~~~~~~~~~~ 376 (413)
T 3dzo_A 363 ETPEYEQLRTELSA 376 (413)
T ss_dssp TSHHHHHHHHHHHH
T ss_pred hCHHHHHHHHHHHH
Confidence 76 6666655543
No 286
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.3e-34 Score=311.34 Aligned_cols=233 Identities=12% Similarity=0.081 Sum_probs=186.9
Q ss_pred hccCCccceecCccceEEEEEEeC-CCcEEEEEEeeccC---chhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEE
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQR---EGALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALV 738 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 738 (952)
.++|++.+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|+.++++++||||+++++++.+++..|+|
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 357999999999999999999985 58999999997553 23346789999999999999999999999999999999
Q ss_pred EEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcC
Q 002214 739 LEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEED 818 (952)
Q Consensus 739 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 818 (952)
|||+++++|.+++... ....++..++.|++.||+|| |++||+||||||+||+++.++.+||+++|
T Consensus 110 ~e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~l---H~~givH~Dikp~NIll~~~g~~kl~~~~--------- 174 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAA---HRAGVALSIDHPSRVRVSIDGDVVLAYPA--------- 174 (286)
T ss_dssp EECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCSGGGEEEETTSCEEECSCC---------
T ss_pred EEecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHH---HHCCCccCCCCcccEEEcCCCCEEEEecc---------
Confidence 9999999999998542 46678899999999999999 78999999999999999999999998543
Q ss_pred cccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccchh
Q 002214 819 SMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSED 898 (952)
Q Consensus 819 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 898 (952)
|++ .++.++|||||||++|||+||+.||......+. ....... +.....
T Consensus 175 ------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~-~~~~~~~--------~~~~~~--- 223 (286)
T 3uqc_A 175 ------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSG-LAPAERD--------TAGQPI--- 223 (286)
T ss_dssp ------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCC-SEECCBC--------TTSCBC---
T ss_pred ------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchh-hHHHHHH--------hccCCC---
Confidence 333 367899999999999999999999976432211 0000000 000000
Q ss_pred hHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 002214 899 EEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISRLIKIRDL 944 (952)
Q Consensus 899 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~~i~~~ 944 (952)
........+++++.+++.+||+.||++| |+.|+++.|+++...
T Consensus 224 --~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~ 266 (286)
T 3uqc_A 224 --EPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAV 266 (286)
T ss_dssp --CHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC-
T ss_pred --ChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhcc
Confidence 0011234567889999999999999999 999999999987654
No 287
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.3e-33 Score=313.56 Aligned_cols=305 Identities=26% Similarity=0.381 Sum_probs=246.1
Q ss_pred CCCccceEEcccCcccccCCccccCCCCCcEEEccCCcccccCCccccccCCccEEEeeCCcCCccCchhhhccCCCcEe
Q 002214 153 GLPRLKGLYVSYNQFKGPIPNNLWHCKELSSVSLSYNQFTGRLPRDLGNSTKLKSLDLGFNNLNGEIPQEIGNLRNLEIL 232 (952)
Q Consensus 153 ~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 232 (952)
.+++|++|++++|.+.. ++ .+..+++|++|++++|++++..+ +..+++|++|++++|.+++ +| .+..+++|++|
T Consensus 42 ~l~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~~L 115 (347)
T 4fmz_A 42 ELESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLREL 115 (347)
T ss_dssp HHTTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEE
T ss_pred hcccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccC-ch-HHcCCCcCCEE
Confidence 46788888888888873 44 47788888888888888885433 8888888888888888874 33 58888888888
Q ss_pred eeccccccccCCccccCCCCccEEEeeCccccccCCCCcccCCCCCcceEEcccCcCCCCCCcccccchhhhhhhccccC
Q 002214 233 GIDQSNLVGFVPDTIFNISTLKILSLFNNTLSGNLPSSKNLIGLPNLEGLNLGLNNLSGSIPSFFFNASKLYALELGYNS 312 (952)
Q Consensus 233 ~L~~n~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l~l~~~~ 312 (952)
++++|++.+..+ +..+++|++|++++|.....++ .+..+++|++|++++|.+.+..+
T Consensus 116 ~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~---~~~~l~~L~~L~l~~~~~~~~~~------------------ 172 (347)
T 4fmz_A 116 YLNEDNISDISP--LANLTKMYSLNLGANHNLSDLS---PLSNMTGLNYLTVTESKVKDVTP------------------ 172 (347)
T ss_dssp ECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG---GGTTCTTCCEEECCSSCCCCCGG------------------
T ss_pred ECcCCcccCchh--hccCCceeEEECCCCCCccccc---chhhCCCCcEEEecCCCcCCchh------------------
Confidence 888888777644 7788888888888885543332 26777888888888887764222
Q ss_pred ccccccccCcceeechhhHHHHHHHhhccccccccCCCcccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCc
Q 002214 313 NLKRLGLERNYLTFSTSELMSLFSALVNCKSLKIGNLINLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQ 392 (952)
Q Consensus 313 ~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~ 392 (952)
++.+++|++|++++|.+++..+ +..+++|+.|++++|.+.+..+
T Consensus 173 ---------------------------------~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~- 216 (347)
T 4fmz_A 173 ---------------------------------IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP- 216 (347)
T ss_dssp ---------------------------------GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG-
T ss_pred ---------------------------------hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch-
Confidence 3456788899999999885443 8888999999999999886544
Q ss_pred cccCCCcceEEEeccccccccCCCccCCCCCCcEEeccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhccccc
Q 002214 393 EFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLRILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAV 472 (952)
Q Consensus 393 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 472 (952)
+..+++|+.|++++|++++..+ +..+++|++|++++|+++++ ..+..+++|+.|++++|++++. ..+..+++|
T Consensus 217 -~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L 289 (347)
T 4fmz_A 217 -VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQL 289 (347)
T ss_dssp -GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTC
T ss_pred -hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCC
Confidence 8888999999999999985544 88899999999999999875 4688999999999999999864 468899999
Q ss_pred ceeecCCcccCCCCcccccCCCCCceEEccCccccCcccccccccccccEEeCCCCccc
Q 002214 473 VDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNKLQGPIPESFGELVSLEFLDLSNNDLS 531 (952)
Q Consensus 473 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 531 (952)
+.|++++|++++..+..|..+++|++|+|++|++++..| +..+++|+.|++++|+|+
T Consensus 290 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 290 NSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp SEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred CEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 999999999998888999999999999999999997666 889999999999999986
No 288
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=5.5e-35 Score=353.10 Aligned_cols=243 Identities=23% Similarity=0.344 Sum_probs=196.5
Q ss_pred hccCCccceecCccceEEEEEEeC--CCcEEEEEEeeccC-chhhHHHHHHHHHHHhCCCCccceeeeEeecCCe-----
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFP--DGIEVAIKVFHLQR-EGALNSFDAECEILKTIRHRNLVKIISSCTNHNF----- 734 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 734 (952)
.++|++.+.||+|+||+||+|.+. +|+.||||++.... ......+.+|++++++++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 368999999999999999999985 68999999986443 3345678899999999999999999999987655
Q ss_pred eEEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEecccccccc
Q 002214 735 KALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLL 814 (952)
Q Consensus 735 ~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~ 814 (952)
.|+||||+++++|.+++.. .+++.+++.++.||++||+|| |++||+||||||+||+++.+ .+||+|||+++..
T Consensus 159 ~~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~l---H~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~ 231 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYL---HSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRI 231 (681)
T ss_dssp EEEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECSS-CEEECCCTTCEET
T ss_pred eEEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHH---HHCCCeecccChHHeEEeCC-cEEEEecccchhc
Confidence 6999999999999887654 689999999999999999999 78999999999999999986 8999999999876
Q ss_pred CCcCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccc
Q 002214 815 SEEDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNL 894 (952)
Q Consensus 815 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 894 (952)
... ....||+.|+|||++.++. +.++|||||||++|||++|..||........ +
T Consensus 232 ~~~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~----------~---------- 285 (681)
T 2pzi_A 232 NSF-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGL----------P---------- 285 (681)
T ss_dssp TCC-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSSC----------C----------
T ss_pred ccC-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccccc----------c----------
Confidence 432 3356999999999887654 8899999999999999999888754211100 0
Q ss_pred cchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCC-CHHHHHHHHHHHHHHH
Q 002214 895 LSEDEEHANVAKQSCASSVLSLAMECTSESPENRV-NTKEIISRLIKIRDLL 945 (952)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~ev~~~L~~i~~~~ 945 (952)
... .....++.+.+++.+||+.||++|| +++++.+.+..+.+..
T Consensus 286 -~~~------~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~ 330 (681)
T 2pzi_A 286 -EDD------PVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLREV 330 (681)
T ss_dssp -TTC------HHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHHHH
T ss_pred -ccc------cccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHHHh
Confidence 000 0112356789999999999999999 5666777777765543
No 289
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=2.5e-34 Score=312.05 Aligned_cols=231 Identities=21% Similarity=0.307 Sum_probs=180.8
Q ss_pred hccCCcc-ceecCccceEEEEEEe-CCCcEEEEEEeeccCchhhHHHHHHHHHH-HhCCCCccceeeeEeec----CCee
Q 002214 663 TDQFSEE-NLIGIGSYGSVYKGRF-PDGIEVAIKVFHLQREGALNSFDAECEIL-KTIRHRNLVKIISSCTN----HNFK 735 (952)
Q Consensus 663 ~~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~----~~~~ 735 (952)
.++|.+. +.||+|+||.||+|.. .+++.||+|+++.. ..+.+|+.++ +..+||||+++++++.. ....
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 90 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 90 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence 3567776 7899999999999987 57899999998532 4567888888 55699999999999876 6778
Q ss_pred EEEEEccCCCChhHHhhhcC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCC---CCcEEEeccccc
Q 002214 736 ALVLEYMPKGSLEDCMYASN-FNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDD---SMVAHLSDFGIA 811 (952)
Q Consensus 736 ~lv~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~---~~~~kl~Dfgla 811 (952)
++||||+++|+|.+++.... ..+++..++.++.|++.||+|| |++||+||||||+||+++. ++.+||+|||+|
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a 167 (299)
T 3m2w_A 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL---HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167 (299)
T ss_dssp EEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence 99999999999999998754 3699999999999999999999 7899999999999999998 789999999999
Q ss_pred cccCCcCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCccchhhhhccchhhhhhhcc
Q 002214 812 KLLSEEDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMD 891 (952)
Q Consensus 812 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 891 (952)
.... +..++.++|||||||++|||++|+.||.......... ...
T Consensus 168 ~~~~-----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~-~~~------------ 211 (299)
T 3m2w_A 168 KETT-----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP-GMK------------ 211 (299)
T ss_dssp EECT-----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------C-CSC------------
T ss_pred cccc-----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhH-HHH------------
Confidence 7542 1346778999999999999999999986532211100 000
Q ss_pred ccccchhhHHHHHhhhhhHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 002214 892 TNLLSEDEEHANVAKQSCASSVLSLAMECTSESPENRVNTKEIISR 937 (952)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 937 (952)
.................+++++.+++.+||+.||++|||+.|++++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 212 TRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp CSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 0000000000011124467889999999999999999999999975
No 290
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=4e-34 Score=311.89 Aligned_cols=236 Identities=33% Similarity=0.560 Sum_probs=223.6
Q ss_pred ccCCCcccEEEccC-CCCCCCCCcccccCCCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCccCCCCCC
Q 002214 346 IGNLINLTTLSLGD-NNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSL 424 (952)
Q Consensus 346 ~~~l~~L~~L~L~~-n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 424 (952)
++.+++|++|++++ |.+.+.+|..|..+++|++|+|++|.+++..|..|..+++|++|+|++|++++.+|..+..+++|
T Consensus 72 l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 151 (313)
T 1ogq_A 72 LANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNL 151 (313)
T ss_dssp GGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTC
T ss_pred HhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCC
Confidence 45678899999995 99998999999999999999999999998999999999999999999999999999999999999
Q ss_pred cEEeccccccCCcCCccccCCC-CCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEccC
Q 002214 425 RILSLSSNELTSVIPSTFWNLE-DILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEH 503 (952)
Q Consensus 425 ~~L~L~~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 503 (952)
++|++++|++++..|..+..++ +|+.|++++|++++..|..+..++ |+.|+|++|++++..|..|..+++|+.|+|++
T Consensus 152 ~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 230 (313)
T 1ogq_A 152 VGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAK 230 (313)
T ss_dssp CEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCS
T ss_pred CeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCC
Confidence 9999999999989999999998 999999999999999999999998 99999999999999999999999999999999
Q ss_pred ccccCcccccccccccccEEeCCCCcccccCccchhcccccccccccccccccCCCCCCCcccccccccccCccCCCCCc
Q 002214 504 NKLQGPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFNKLVGEIPRGGAFANFSAESFIGNDLLCGSPY 583 (952)
Q Consensus 504 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~p~ 583 (952)
|++++.+|. +..+++|++|+|++|+|++.+|..+..+++|+.|++++|+++|.+|....+.++....+.+|+++||.|.
T Consensus 231 N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p~ 309 (313)
T 1ogq_A 231 NSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPL 309 (313)
T ss_dssp SEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTS
T ss_pred CceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCCCC
Confidence 999976665 8899999999999999999999999999999999999999999999988899999999999999999884
No 291
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=9.1e-35 Score=321.21 Aligned_cols=244 Identities=16% Similarity=0.188 Sum_probs=185.6
Q ss_pred hccCCccceecCccceEEEEEEeCCCcEEEEEEeeccC--------chhhHHHHHHHHHHHhCC---------CCcccee
Q 002214 663 TDQFSEENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQR--------EGALNSFDAECEILKTIR---------HRNLVKI 725 (952)
Q Consensus 663 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---------h~niv~l 725 (952)
.++|++.+.||+|+||+||+|++ +|+.||||+++... ....+.+.+|+.++++++ |||++++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 46799999999999999999998 78999999997553 223467889999999886 6666665
Q ss_pred eeE-----------------eec-------------CCeeEEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHH
Q 002214 726 ISS-----------------CTN-------------HNFKALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALE 775 (952)
Q Consensus 726 ~~~-----------------~~~-------------~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~ 775 (952)
.++ +.+ .+..|+||||+++|++.+.+.. ..+++..+..++.|++.||+
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHHH
Confidence 554 332 6789999999999976666643 35899999999999999999
Q ss_pred HHHhcC-CCCeEeCCCCCCCeeeCCCC--------------------cEEEeccccccccCCcCcccccccccccccccc
Q 002214 776 YLHFGH-SNPIVHCDIKPSNVLLDDSM--------------------VAHLSDFGIAKLLSEEDSMKQTQTLATIGYIAP 834 (952)
Q Consensus 776 ~Lh~~h-~~~ivH~Dlk~~Nill~~~~--------------------~~kl~Dfgla~~~~~~~~~~~~~~~~~~~y~aP 834 (952)
|| | ++||+||||||+|||++.++ .+||+|||+|+..... ...||+.|+||
T Consensus 176 ~l---H~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~y~aP 246 (336)
T 2vuw_A 176 VA---EASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDVSMDE 246 (336)
T ss_dssp HH---HHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCCTTCS
T ss_pred HH---HHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeecccCh
Confidence 99 6 89999999999999999887 9999999999866422 34699999999
Q ss_pred cccCcCCcCcccchHhHHHH-HHHHHhCCCCCCccccCccchhhhhccchhhhhhhccccccchhhHHHHHhhhhhHHHH
Q 002214 835 EYGREGQVSIKGDVYNYGIM-LMEVFTGMKPTNEFFTGEMSIKRWINDSLPAVMNIMDTNLLSEDEEHANVAKQSCASSV 913 (952)
Q Consensus 835 E~~~~~~~~~~~Dv~slG~~-l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 913 (952)
|++.+.. +.++||||+|++ .+++++|..||... .|.................. ....+..+++++
T Consensus 247 E~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~--------~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~s~~~ 312 (336)
T 2vuw_A 247 DLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV--------LWLHYLTDKMLKQMTFKTKC-----NTPAMKQIKRKI 312 (336)
T ss_dssp GGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH--------HHHHHHHHHHHHTCCCSSCC-----CSHHHHHHHHHH
T ss_pred hhhcCCC-ccceehhhhhCCCCcccccccCCCcch--------hhhhHHHHhhhhhhccCccc-----chhhhhhcCHHH
Confidence 9998766 889999998777 78888999997431 11111111111100000000 011234578899
Q ss_pred HHHHhhccccCCCCCCCHHHHH-HH
Q 002214 914 LSLAMECTSESPENRVNTKEII-SR 937 (952)
Q Consensus 914 ~~li~~cl~~dP~~RPs~~ev~-~~ 937 (952)
.+|+.+||+.| |++|++ ++
T Consensus 313 ~dli~~~L~~d-----sa~e~l~~H 332 (336)
T 2vuw_A 313 QEFHRTMLNFS-----SATDLLCQH 332 (336)
T ss_dssp HHHHHHGGGSS-----SHHHHHHHC
T ss_pred HHHHHHHhccC-----CHHHHHhcC
Confidence 99999999976 999988 53
No 292
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=5.9e-33 Score=330.79 Aligned_cols=314 Identities=21% Similarity=0.196 Sum_probs=224.1
Q ss_pred CCCCcEEEccCCcccccCCccccccCCccEEEeeCCcCCccCchhhhccCCCcEeeeccccccccCCccccCCCCccEEE
Q 002214 178 CKELSSVSLSYNQFTGRLPRDLGNSTKLKSLDLGFNNLNGEIPQEIGNLRNLEILGIDQSNLVGFVPDTIFNISTLKILS 257 (952)
Q Consensus 178 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~ 257 (952)
+.+++.|++++|.++...+..|+.+++|++|+|++|.+++..|..|+.+++|+.|+|++|.+.+..|..|.+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-------- 121 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQN-------- 121 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTT--------
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcC--------
Confidence 345555555555555444444455555555555555555444445555555555555555554444444444
Q ss_pred eeCccccccCCCCcccCCCCCcceEEcccCcCCCCCCcccccchhhhhhhccccCccccccccCcceeechhhHHHHHHH
Q 002214 258 LFNNTLSGNLPSSKNLIGLPNLEGLNLGLNNLSGSIPSFFFNASKLYALELGYNSNLKRLGLERNYLTFSTSELMSLFSA 337 (952)
Q Consensus 258 Ls~N~l~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l~l~~~~~L~~L~L~~n~l~~~~~~~~~~~~~ 337 (952)
+++|++|+|++|.+++.++..
T Consensus 122 ------------------l~~L~~L~L~~n~l~~l~~~~----------------------------------------- 142 (597)
T 3oja_B 122 ------------------VPLLTVLVLERNDLSSLPRGI----------------------------------------- 142 (597)
T ss_dssp ------------------CTTCCEEECCSSCCCCCCTTT-----------------------------------------
T ss_pred ------------------CCCCCEEEeeCCCCCCCCHHH-----------------------------------------
Confidence 455555555555554333322
Q ss_pred hhccccccccCCCcccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCc
Q 002214 338 LVNCKSLKIGNLINLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSC 417 (952)
Q Consensus 338 ~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 417 (952)
|+++++|++|+|++|.+++..|..|..+++|++|+|++|.+++.. +..+++|+.|++++|.+++.
T Consensus 143 --------~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~l---- 207 (597)
T 3oja_B 143 --------FHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTL---- 207 (597)
T ss_dssp --------TTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSEE----
T ss_pred --------hccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCccccc----
Confidence 234556666777777776666666777777777777777776542 44556777777777777632
Q ss_pred cCCCCCCcEEeccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCc
Q 002214 418 LGDLNSLRILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQ 497 (952)
Q Consensus 418 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 497 (952)
...++|+.|++++|.++.+.+.. .++|+.|+|++|.+++ +..+..+++|+.|+|++|.+++..|..|..+++|+
T Consensus 208 -~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 281 (597)
T 3oja_B 208 -AIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLE 281 (597)
T ss_dssp -ECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCC
T ss_pred -cCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCC
Confidence 34467888999999888665433 2689999999999985 47899999999999999999999999999999999
Q ss_pred eEEccCccccCcccccccccccccEEeCCCCcccccCccchhcccccccccccccccccCCCCCCCcccccccccccCcc
Q 002214 498 HLSLEHNKLQGPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFNKLVGEIPRGGAFANFSAESFIGNDL 577 (952)
Q Consensus 498 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~ 577 (952)
.|+|++|++++ +|..+..+++|+.|+|++|.|+ .+|..+..+++|+.|+|++|++++.. ...+..+....+.+|++
T Consensus 282 ~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~L~~L~l~~N~~ 357 (597)
T 3oja_B 282 RLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK--LSTHHTLKNLTLSHNDW 357 (597)
T ss_dssp EEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC--CCTTCCCSEEECCSSCE
T ss_pred EEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcC--hhhcCCCCEEEeeCCCC
Confidence 99999999995 6777888999999999999999 57788899999999999999998753 34677888888999999
Q ss_pred CCCCCc
Q 002214 578 LCGSPY 583 (952)
Q Consensus 578 ~c~~p~ 583 (952)
.|.+..
T Consensus 358 ~~~~~~ 363 (597)
T 3oja_B 358 DCNSLR 363 (597)
T ss_dssp EHHHHH
T ss_pred CChhHH
Confidence 998753
No 293
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=4e-32 Score=299.40 Aligned_cols=288 Identities=20% Similarity=0.284 Sum_probs=192.4
Q ss_pred CCcEEEccCCcccccCCccccccCCccEEEeeCCcCCccCchhhhccCCCcEeeeccccccccCCccccCCCCccEEEee
Q 002214 180 ELSSVSLSYNQFTGRLPRDLGNSTKLKSLDLGFNNLNGEIPQEIGNLRNLEILGIDQSNLVGFVPDTIFNISTLKILSLF 259 (952)
Q Consensus 180 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls 259 (952)
+++.+++++|.++ .+|..+. ++|++|+|++|.+++..|..|..+++|+.|++++|++.+..|..+.++++|++|+++
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 5777888888777 5565553 577788888888776666777777777777777777777777777777777777777
Q ss_pred CccccccCCCCcccCCCCCcceEEcccCcCCCCCCcccccchhhhhhhccccCccccccccCcceeechhhHHHHHHHhh
Q 002214 260 NNTLSGNLPSSKNLIGLPNLEGLNLGLNNLSGSIPSFFFNASKLYALELGYNSNLKRLGLERNYLTFSTSELMSLFSALV 339 (952)
Q Consensus 260 ~N~l~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l~l~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~ 339 (952)
+|+++. +|.. + .++|++|++
T Consensus 111 ~n~l~~-l~~~--~--~~~L~~L~l------------------------------------------------------- 130 (332)
T 2ft3_A 111 KNHLVE-IPPN--L--PSSLVELRI------------------------------------------------------- 130 (332)
T ss_dssp SSCCCS-CCSS--C--CTTCCEEEC-------------------------------------------------------
T ss_pred CCcCCc-cCcc--c--cccCCEEEC-------------------------------------------------------
Confidence 777652 2221 1 134444444
Q ss_pred ccccccccCCCcccEEEccCCCCCCCCCcccccCCCCcEEEccCcccc--CCCCccccCCCcceEEEeccccccccCCCc
Q 002214 340 NCKSLKIGNLINLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFE--GPIPQEFCHFSRLYVVYLNRNKLSGSIPSC 417 (952)
Q Consensus 340 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~--~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 417 (952)
++|++++..+..|..+++|++|++++|.++ +..+..|..+ +|+.|++++|++++ +|..
T Consensus 131 ------------------~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~ 190 (332)
T 2ft3_A 131 ------------------HDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKD 190 (332)
T ss_dssp ------------------CSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSS
T ss_pred ------------------CCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcc
Confidence 444444444444555555555555555553 2444455544 55555555555553 3333
Q ss_pred cCCCCCCcEEeccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCc
Q 002214 418 LGDLNSLRILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQ 497 (952)
Q Consensus 418 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 497 (952)
+. ++|++|++++|++++..+..|..+++|+.|++++|++++..+..+..+++|++|+|++|+++ .+|..+..+++|+
T Consensus 191 ~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~ 267 (332)
T 2ft3_A 191 LP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQ 267 (332)
T ss_dssp SC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCC
T ss_pred cc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCC
Confidence 32 56777777777777777777777777777777777777766667777788888888888887 5666777888888
Q ss_pred eEEccCccccCccccccccc------ccccEEeCCCCccc--ccCccchhcccccccccccccc
Q 002214 498 HLSLEHNKLQGPIPESFGEL------VSLEFLDLSNNDLS--GVIPASLEKLLYLKSLNLSFNK 553 (952)
Q Consensus 498 ~L~L~~N~l~~~~~~~~~~l------~~L~~L~Ls~N~l~--~~~~~~~~~l~~L~~L~l~~N~ 553 (952)
.|+|++|+|++..+..|... ++|+.|++++|++. +..|..|..+++|+.+++++|+
T Consensus 268 ~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 268 VVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp EEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred EEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 88888888887666666543 56888888888887 5677788888888888888874
No 294
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=1.2e-31 Score=295.52 Aligned_cols=290 Identities=21% Similarity=0.271 Sum_probs=183.4
Q ss_pred CCCcEEEccCCcccccCCccccccCCccEEEeeCCcCCccCchhhhccCCCcEeeeccccccccCCccccCCCCccEEEe
Q 002214 179 KELSSVSLSYNQFTGRLPRDLGNSTKLKSLDLGFNNLNGEIPQEIGNLRNLEILGIDQSNLVGFVPDTIFNISTLKILSL 258 (952)
Q Consensus 179 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~L 258 (952)
.+++.++++++.++ .+|..+. ++|++|+|++|++++..+..|+.+++|++|+|++|++.+..|..+.++++|++|++
T Consensus 31 c~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 31 CHLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp EETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 36788888888887 5565554 57888888888888766667888888888888888888777777777778888888
Q ss_pred eCccccccCCCCcccCCCCCcceEEcccCcCCCCCCcccccchhhhhhhccccCccccccccCcceeechhhHHHHHHHh
Q 002214 259 FNNTLSGNLPSSKNLIGLPNLEGLNLGLNNLSGSIPSFFFNASKLYALELGYNSNLKRLGLERNYLTFSTSELMSLFSAL 338 (952)
Q Consensus 259 s~N~l~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l~l~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~ 338 (952)
++|+++. +|.. + .++|++|++++|+++
T Consensus 108 s~n~l~~-l~~~--~--~~~L~~L~l~~n~l~------------------------------------------------ 134 (330)
T 1xku_A 108 SKNQLKE-LPEK--M--PKTLQELRVHENEIT------------------------------------------------ 134 (330)
T ss_dssp CSSCCSB-CCSS--C--CTTCCEEECCSSCCC------------------------------------------------
T ss_pred CCCcCCc-cChh--h--cccccEEECCCCccc------------------------------------------------
Confidence 7777763 2221 1 145555555555544
Q ss_pred hccccccccCCCcccEEEccCCCCCCCCCcccccCCCCcEEEccCccccC--CCCccccCCCcceEEEeccccccccCCC
Q 002214 339 VNCKSLKIGNLINLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEG--PIPQEFCHFSRLYVVYLNRNKLSGSIPS 416 (952)
Q Consensus 339 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~--~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 416 (952)
+..+..|..+++|++|++++|.+.. ..+..|..+++|+.|++++|+++. +|.
T Consensus 135 -------------------------~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~ 188 (330)
T 1xku_A 135 -------------------------KVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQ 188 (330)
T ss_dssp -------------------------BBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCS
T ss_pred -------------------------ccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-CCc
Confidence 3333334444444444444444421 334444444445555555554442 233
Q ss_pred ccCCCCCCcEEeccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCC
Q 002214 417 CLGDLNSLRILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNL 496 (952)
Q Consensus 417 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 496 (952)
.+. ++|++|++++|++++..+..|..+++|+.|++++|++++..+..+..+++|++|+|++|+++ .+|..+..+++|
T Consensus 189 ~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L 265 (330)
T 1xku_A 189 GLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYI 265 (330)
T ss_dssp SCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSC
T ss_pred ccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCc
Confidence 222 55666666666666665666666666666666666666555556666667777777777776 556666777777
Q ss_pred ceEEccCccccCcccccccc------cccccEEeCCCCcccc--cCccchhcccccccccccccc
Q 002214 497 QHLSLEHNKLQGPIPESFGE------LVSLEFLDLSNNDLSG--VIPASLEKLLYLKSLNLSFNK 553 (952)
Q Consensus 497 ~~L~L~~N~l~~~~~~~~~~------l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~l~~N~ 553 (952)
++|+|++|+|++..+..|.. .+.|+.|++++|++.. +.|..|..+..++.++|++|+
T Consensus 266 ~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 266 QVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp CEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred CEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 77777777777665555543 3677788888887753 556777788888888888774
No 295
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=8.7e-32 Score=296.69 Aligned_cols=301 Identities=22% Similarity=0.272 Sum_probs=211.4
Q ss_pred cCCCCCCCCC-----CccceEEcccCcccccCCccccCCCCCcEEEccCCcccccCCccccccCCccEEEeeCCcCCccC
Q 002214 145 SFPYDMCPGL-----PRLKGLYVSYNQFKGPIPNNLWHCKELSSVSLSYNQFTGRLPRDLGNSTKLKSLDLGFNNLNGEI 219 (952)
Q Consensus 145 ~~~~~~~~~l-----~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 219 (952)
++|..+...+ .+++.+++++|.++ .+|..+. ++|+.|+|++|.+++..|..|+++++|++|+|++|++++..
T Consensus 18 ~lp~~~~~~cp~~c~c~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 94 (332)
T 2ft3_A 18 SLPPTYSAMCPFGCHCHLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIH 94 (332)
T ss_dssp -------CCCCSSCEEETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred cCCCcccCCCCCCCcccCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccC
Confidence 5665544433 37999999999998 6777664 68999999999999888889999999999999999999888
Q ss_pred chhhhccCCCcEeeeccccccccCCccccCCCCccEEEeeCccccccCCCCcccCCCCCcceEEcccCcCCCCCCccccc
Q 002214 220 PQEIGNLRNLEILGIDQSNLVGFVPDTIFNISTLKILSLFNNTLSGNLPSSKNLIGLPNLEGLNLGLNNLSGSIPSFFFN 299 (952)
Q Consensus 220 p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~ 299 (952)
|..|+.+++|++|++++|++..+.+..+ ++|++|++++|++++..+ ..+..+++|++|++++|.++..
T Consensus 95 ~~~~~~l~~L~~L~L~~n~l~~l~~~~~---~~L~~L~l~~n~i~~~~~--~~~~~l~~L~~L~l~~n~l~~~------- 162 (332)
T 2ft3_A 95 EKAFSPLRKLQKLYISKNHLVEIPPNLP---SSLVELRIHDNRIRKVPK--GVFSGLRNMNCIEMGGNPLENS------- 162 (332)
T ss_dssp GGGSTTCTTCCEEECCSSCCCSCCSSCC---TTCCEEECCSSCCCCCCS--GGGSSCSSCCEEECCSCCCBGG-------
T ss_pred HhHhhCcCCCCEEECCCCcCCccCcccc---ccCCEEECCCCccCccCH--hHhCCCccCCEEECCCCccccC-------
Confidence 9999999999999999999986644433 899999999999985422 2355566666666666665420
Q ss_pred chhhhhhhccccCccccccccCcceeechhhHHHHHHHhhccccccccCCCcccEEEccCCCCCCCCCcccccCCCCcEE
Q 002214 300 ASKLYALELGYNSNLKRLGLERNYLTFSTSELMSLFSALVNCKSLKIGNLINLTTLSLGDNNLSGSLPITLGRLKKLQGL 379 (952)
Q Consensus 300 ~~~L~~l~l~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 379 (952)
+..+..+..+ +|++|
T Consensus 163 ----------------------------------------------------------------~~~~~~~~~l-~L~~L 177 (332)
T 2ft3_A 163 ----------------------------------------------------------------GFEPGAFDGL-KLNYL 177 (332)
T ss_dssp ----------------------------------------------------------------GSCTTSSCSC-CCSCC
T ss_pred ----------------------------------------------------------------CCCcccccCC-ccCEE
Confidence 1223333333 44444
Q ss_pred EccCccccCCCCccccCCCcceEEEeccccccccCCCccCCCCCCcEEeccccccCCcCCccccCCCCCceeEecCCccC
Q 002214 380 DLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLRILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLN 459 (952)
Q Consensus 380 ~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 459 (952)
++++|.+++ .|..+. ++|+.|++++|++++..+..|..+++|+.|++++|++++..+..|..+++|+.|++++|+++
T Consensus 178 ~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 254 (332)
T 2ft3_A 178 RISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS 254 (332)
T ss_dssp BCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC
T ss_pred ECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe
Confidence 444444443 222221 45555555555555555556666677777777777777666666777777777777777776
Q ss_pred CCCchhhhcccccceeecCCcccCCCCcccccC------CCCCceEEccCcccc--CcccccccccccccEEeCCCCc
Q 002214 460 GSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIG------LKNLQHLSLEHNKLQ--GPIPESFGELVSLEFLDLSNND 529 (952)
Q Consensus 460 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~------l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~Ls~N~ 529 (952)
.+|..+..+++|+.|++++|++++..+..|.. .++|+.|++++|.+. +..|..|..+++|+.|++++|+
T Consensus 255 -~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 255 -RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp -BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred -ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 56666777777777888888777666666654 366888999999887 5677888889999999998885
No 296
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=1.9e-31 Score=293.87 Aligned_cols=291 Identities=22% Similarity=0.242 Sum_probs=197.5
Q ss_pred CCccceEEcccCcccccCCccccCCCCCcEEEccCCcccccCCccccccCCccEEEeeCCcCCccCchhhhccCCCcEee
Q 002214 154 LPRLKGLYVSYNQFKGPIPNNLWHCKELSSVSLSYNQFTGRLPRDLGNSTKLKSLDLGFNNLNGEIPQEIGNLRNLEILG 233 (952)
Q Consensus 154 l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 233 (952)
..+++.++++++.++ .+|..+. ++|+.|+|++|++++..+..|+++++|++|+|++|.+++..|..|+.+++|++|+
T Consensus 30 ~c~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (330)
T 1xku_A 30 QCHLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLY 106 (330)
T ss_dssp EEETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEE
T ss_pred cCCCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEE
Confidence 348999999999998 5777664 6899999999999988888999999999999999999988899999999999999
Q ss_pred eccccccccCCccccCCCCccEEEeeCccccccCCCCcccCCCCCcceEEcccCcCCC--CCCcccccchhhhhhhcccc
Q 002214 234 IDQSNLVGFVPDTIFNISTLKILSLFNNTLSGNLPSSKNLIGLPNLEGLNLGLNNLSG--SIPSFFFNASKLYALELGYN 311 (952)
Q Consensus 234 L~~n~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~L~~L~L~~N~l~~--~~~~~~~~~~~L~~l~l~~~ 311 (952)
+++|++..+... +. ++|++|++++|++++..+ ..+..+++|++|++++|.+.. ..+.
T Consensus 107 Ls~n~l~~l~~~-~~--~~L~~L~l~~n~l~~~~~--~~~~~l~~L~~L~l~~n~l~~~~~~~~---------------- 165 (330)
T 1xku_A 107 LSKNQLKELPEK-MP--KTLQELRVHENEITKVRK--SVFNGLNQMIVVELGTNPLKSSGIENG---------------- 165 (330)
T ss_dssp CCSSCCSBCCSS-CC--TTCCEEECCSSCCCBBCH--HHHTTCTTCCEEECCSSCCCGGGBCTT----------------
T ss_pred CCCCcCCccChh-hc--ccccEEECCCCcccccCH--hHhcCCccccEEECCCCcCCccCcChh----------------
Confidence 999998865443 33 799999999999986533 236677778888887777752 1111
Q ss_pred CccccccccCcceeechhhHHHHHHHhhccccccccCCCcccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCC
Q 002214 312 SNLKRLGLERNYLTFSTSELMSLFSALVNCKSLKIGNLINLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIP 391 (952)
Q Consensus 312 ~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~ 391 (952)
.++.+++|++|++++|.++. +|..+. ++|++|++++|.+++..+
T Consensus 166 ---------------------------------~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~ 209 (330)
T 1xku_A 166 ---------------------------------AFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKITKVDA 209 (330)
T ss_dssp ---------------------------------GGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECT
T ss_pred ---------------------------------hccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCCccCH
Confidence 13445566666666666663 232222 455555555555554444
Q ss_pred ccccCCCcceEEEeccccccccCCCccCCCCCCcEEeccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccc
Q 002214 392 QEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLRILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKA 471 (952)
Q Consensus 392 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 471 (952)
..|..++ +|++|++++|++++..+..|..+++|+.|++++|+++ .+|..+..+++
T Consensus 210 ~~~~~l~------------------------~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~ 264 (330)
T 1xku_A 210 ASLKGLN------------------------NLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKY 264 (330)
T ss_dssp GGGTTCT------------------------TCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSS
T ss_pred HHhcCCC------------------------CCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCC
Confidence 4554444 4555555555554444444555555555555555555 34555555556
Q ss_pred cceeecCCcccCCCCcccccC------CCCCceEEccCccccC--cccccccccccccEEeCCCCc
Q 002214 472 VVDIYLSRNNLSGNIPSTIIG------LKNLQHLSLEHNKLQG--PIPESFGELVSLEFLDLSNND 529 (952)
Q Consensus 472 L~~L~Ls~N~l~~~~~~~~~~------l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~Ls~N~ 529 (952)
|++|+|++|+|+++.+..|.. .+.|+.|++++|.+.. +.|..|..+++|+.++|++|+
T Consensus 265 L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 265 IQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp CCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred cCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 666666666666555555533 3667778888887753 556777778888888888774
No 297
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=8.1e-35 Score=336.94 Aligned_cols=398 Identities=18% Similarity=0.145 Sum_probs=218.3
Q ss_pred cccCeeeccccccccccCCC-cCCcCCCcEEeCcCCcccc----cCChhhcCCCCCCeEeecCccCccccCccccccccc
Q 002214 57 SSLQTLVLSRNWFSGTIPKE-IGNLTKLKELHLDYNKLQG----EIPEELGNLAELEMLVLNNNLLTGTIPASIFNLSFI 131 (952)
Q Consensus 57 ~~L~~L~L~~n~l~~~~p~~-l~~l~~L~~L~L~~n~l~~----~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~l 131 (952)
++|+.|+|++|++++..... +..+++|++|+|++|.+.. .++..+..+++|++|+|++|.+++..+..++...
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l-- 80 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGL-- 80 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTT--
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHH--
Confidence 46677777777776443333 5667777777777777763 3466677777777777777777643333332110
Q ss_pred ccceeeccccccccCCCCCCCCCCccceEEcccCcccc----cCCccccCCCCCcEEEccCCcccccCCccccc-----c
Q 002214 132 STALDFSDNSLTGSFPYDMCPGLPRLKGLYVSYNQFKG----PIPNNLWHCKELSSVSLSYNQFTGRLPRDLGN-----S 202 (952)
Q Consensus 132 ~~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~----~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~-----l 202 (952)
+ ...++|++|+|++|+++. .++..+..+++|++|+|++|.+++..+..+.. .
T Consensus 81 ---------------~----~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~ 141 (461)
T 1z7x_W 81 ---------------Q----TPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQ 141 (461)
T ss_dssp ---------------C----STTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTT
T ss_pred ---------------h----hCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCC
Confidence 0 011257777777777763 34666777777777777777776443433322 4
Q ss_pred CCccEEEeeCCcCCccC----chhhhccCCCcEeeeccccccccCCcccc-----CCCCccEEEeeCccccccCC--CCc
Q 002214 203 TKLKSLDLGFNNLNGEI----PQEIGNLRNLEILGIDQSNLVGFVPDTIF-----NISTLKILSLFNNTLSGNLP--SSK 271 (952)
Q Consensus 203 ~~L~~L~L~~N~l~~~~----p~~~~~l~~L~~L~L~~n~~~~~~~~~~~-----~l~~L~~L~Ls~N~l~~~~~--~~~ 271 (952)
++|++|+|++|++++.. +..+..+++|+.|++++|.+....+..+. ..++|++|++++|.+++... -..
T Consensus 142 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~ 221 (461)
T 1z7x_W 142 CRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCG 221 (461)
T ss_dssp CCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHH
T ss_pred CcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHH
Confidence 46777777777776533 45556667777777777666554333332 13456666666665542100 001
Q ss_pred ccCCCCCcceEEcccCcCCCCCCcccccchhhhhhhccccCccccccccCcceeechhhHHHHHHHhhccccccccCCCc
Q 002214 272 NLIGLPNLEGLNLGLNNLSGSIPSFFFNASKLYALELGYNSNLKRLGLERNYLTFSTSELMSLFSALVNCKSLKIGNLIN 351 (952)
Q Consensus 272 ~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l~l~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 351 (952)
.+..+++|++|++++|++++..... +... .+..+++
T Consensus 222 ~l~~~~~L~~L~Ls~n~l~~~~~~~-------------------------------------l~~~-------~~~~~~~ 257 (461)
T 1z7x_W 222 IVASKASLRELALGSNKLGDVGMAE-------------------------------------LCPG-------LLHPSSR 257 (461)
T ss_dssp HHHHCTTCCEEECCSSBCHHHHHHH-------------------------------------HHHH-------HTSTTCC
T ss_pred HHHhCCCccEEeccCCcCChHHHHH-------------------------------------HHHH-------HhcCCCC
Confidence 1223444444555444443210000 0000 0123556
Q ss_pred ccEEEccCCCCCCC----CCcccccCCCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCccCCCCCCcEE
Q 002214 352 LTTLSLGDNNLSGS----LPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLRIL 427 (952)
Q Consensus 352 L~~L~L~~n~l~~~----~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 427 (952)
|++|++++|.++.. ++..+..+++|++|++++|.+.+..+..+... .....++|++|
T Consensus 258 L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~-------------------l~~~~~~L~~L 318 (461)
T 1z7x_W 258 LRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCET-------------------LLEPGCQLESL 318 (461)
T ss_dssp CCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHH-------------------HTSTTCCCCEE
T ss_pred ceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHH-------------------hccCCccceee
Confidence 66666666666632 34455556666666666666653333222211 00112355555
Q ss_pred eccccccCCc----CCccccCCCCCceeEecCCccCCCCchhhhc-----ccccceeecCCcccCC----CCcccccCCC
Q 002214 428 SLSSNELTSV----IPSTFWNLEDILGFDFSSNSLNGSLPLEIEN-----LKAVVDIYLSRNNLSG----NIPSTIIGLK 494 (952)
Q Consensus 428 ~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-----l~~L~~L~Ls~N~l~~----~~~~~~~~l~ 494 (952)
++++|.+++. .+..+..+++|+.|++++|.+++..+..+.. .++|++|+|++|++++ .+|..+..++
T Consensus 319 ~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~ 398 (461)
T 1z7x_W 319 WVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANH 398 (461)
T ss_dssp ECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCC
T ss_pred EcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCC
Confidence 5555555433 2333444556666666666655433333332 4577777777777764 5566677777
Q ss_pred CCceEEccCccccCccccccc-----ccccccEEeCCCCcccccCccch
Q 002214 495 NLQHLSLEHNKLQGPIPESFG-----ELVSLEFLDLSNNDLSGVIPASL 538 (952)
Q Consensus 495 ~L~~L~L~~N~l~~~~~~~~~-----~l~~L~~L~Ls~N~l~~~~~~~~ 538 (952)
+|++|+|++|++++.....+. ...+|+.|++.+|.+....+..+
T Consensus 399 ~L~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~~~~~~~~~~~l 447 (461)
T 1z7x_W 399 SLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEEMEDRL 447 (461)
T ss_dssp CCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCHHHHHHH
T ss_pred CccEEECCCCCCCHHHHHHHHHHhccCCcchhheeecccccCHHHHHHH
Confidence 888888888877643222221 23457777777777664444433
No 298
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=1.1e-31 Score=294.32 Aligned_cols=264 Identities=19% Similarity=0.267 Sum_probs=218.2
Q ss_pred ccCCCCcccccc----CCCCCCCCCceEEEeC--------CCCeEEEEEecCCCCcccCCccccCCcccCeeeccccccc
Q 002214 3 NDNPNNILAQNW----TSNASVCSWMGITCDV--------YGNRVTSLTISDLGLAGTIPSHLGNLSSLQTLVLSRNWFS 70 (952)
Q Consensus 3 ~~~~~~~~~~~~----~~~~~~c~w~~v~c~~--------~~~~~~~l~l~~~~~~~~~p~~l~~l~~L~~L~L~~n~l~ 70 (952)
..||.+.++ +| ....++|.|.|+.|.. ...++++|++++++++ .+|+.++++++|++|+|++|.++
T Consensus 40 ~~~~~~~~~-~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~ 117 (328)
T 4fcg_A 40 NADRNRWHS-AWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM 117 (328)
T ss_dssp HHCCTTHHH-HHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC
T ss_pred cCCchhhhh-hhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc
Confidence 357777775 77 4567999999999952 3468999999999998 89999999999999999999999
Q ss_pred cccCCCcCCcCCCcEEeCcCCcccccCChhhcCCCCCCeEeecCccCccccCcccccccccccceeeccccccccCCCCC
Q 002214 71 GTIPKEIGNLTKLKELHLDYNKLQGEIPEELGNLAELEMLVLNNNLLTGTIPASIFNLSFISTALDFSDNSLTGSFPYDM 150 (952)
Q Consensus 71 ~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~l~~~L~l~~n~l~~~~~~~~ 150 (952)
.+|..++.+++|++|+|++|++. .+|..++++++|++|+|++|.+.+.+|..+.... +. ..
T Consensus 118 -~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~------------~~-----~~ 178 (328)
T 4fcg_A 118 -ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTD------------AS-----GE 178 (328)
T ss_dssp -CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-------------C-----CC
T ss_pred -chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhcc------------ch-----hh
Confidence 89999999999999999999999 8899999999999999999998888998776421 00 12
Q ss_pred CCCCCccceEEcccCcccccCCccccCCCCCcEEEccCCcccccCCccccccCCccEEEeeCCcCCccCchhhhccCCCc
Q 002214 151 CPGLPRLKGLYVSYNQFKGPIPNNLWHCKELSSVSLSYNQFTGRLPRDLGNSTKLKSLDLGFNNLNGEIPQEIGNLRNLE 230 (952)
Q Consensus 151 ~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 230 (952)
+.++++|++|+|++|+++ .+|..+..+++|+.|+|++|+++ .+|..++.+++|++|+|++|++.+.+|..|+.+++|+
T Consensus 179 ~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~ 256 (328)
T 4fcg_A 179 HQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLK 256 (328)
T ss_dssp EEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCC
T ss_pred hccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCC
Confidence 345778888888888887 67777888888888888888888 4566788888888888888888778888888888888
Q ss_pred EeeeccccccccCCccccCCCCccEEEeeCccccccCCCCcccCCCCCcceEEcccCcCCC
Q 002214 231 ILGIDQSNLVGFVPDTIFNISTLKILSLFNNTLSGNLPSSKNLIGLPNLEGLNLGLNNLSG 291 (952)
Q Consensus 231 ~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~L~~L~L~~N~l~~ 291 (952)
.|+|++|++.+.+|..+.++++|++|+|++|.+.+.+|.. +..+++|+.+++..+.+..
T Consensus 257 ~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~--l~~L~~L~~l~l~~~~~~~ 315 (328)
T 4fcg_A 257 RLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSL--IAQLPANCIILVPPHLQAQ 315 (328)
T ss_dssp EEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGG--GGGSCTTCEEECCGGGSCC
T ss_pred EEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHH--HhhccCceEEeCCHHHHHH
Confidence 8888888888888888888888888888888887777754 7778888888888776653
No 299
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=3.9e-34 Score=331.17 Aligned_cols=363 Identities=20% Similarity=0.177 Sum_probs=210.1
Q ss_pred CccceEEcccCcccccCCcc-ccCCCCCcEEEccCCcccc----cCCccccccCCccEEEeeCCcCCccCchhhh-ccC-
Q 002214 155 PRLKGLYVSYNQFKGPIPNN-LWHCKELSSVSLSYNQFTG----RLPRDLGNSTKLKSLDLGFNNLNGEIPQEIG-NLR- 227 (952)
Q Consensus 155 ~~L~~L~L~~n~l~~~~~~~-l~~l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~- 227 (952)
++|++|+|++|+++...... +..+++|+.|+|++|+++. .++..+..+++|++|+|++|.+++..+..+. .++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 35566666666655322222 4556666666666666653 2344555556666666666666543333332 244
Q ss_pred ---CCcEeeeccccccc----cCCccccCCCCccEEEeeCccccccCCCC---cccCCCCCcceEEcccCcCCCCCCccc
Q 002214 228 ---NLEILGIDQSNLVG----FVPDTIFNISTLKILSLFNNTLSGNLPSS---KNLIGLPNLEGLNLGLNNLSGSIPSFF 297 (952)
Q Consensus 228 ---~L~~L~L~~n~~~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~---~~l~~l~~L~~L~L~~N~l~~~~~~~~ 297 (952)
+|++|+|++|++.. .++..+..+++|++|+|++|.+++..+.. ......++|++|++++|++++.....+
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 46666666666653 33555666666666666666664321110 001224467777777776664322211
Q ss_pred ccchhhhhhhccccCccccccccCcceeechhhHHHHHHHhhccccccccCCCcccEEEccCCCCCCC----CCcccccC
Q 002214 298 FNASKLYALELGYNSNLKRLGLERNYLTFSTSELMSLFSALVNCKSLKIGNLINLTTLSLGDNNLSGS----LPITLGRL 373 (952)
Q Consensus 298 ~~~~~L~~l~l~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~----~~~~l~~l 373 (952)
.. .+..+++|+.|++++|.+.......+ ...+. ...++|++|++++|.++.. ++..+..+
T Consensus 163 ~~-------~l~~~~~L~~L~L~~n~i~~~~~~~l--~~~l~-------~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~ 226 (461)
T 1z7x_W 163 AS-------VLRAKPDFKELTVSNNDINEAGVRVL--CQGLK-------DSPCQLEALKLESCGVTSDNCRDLCGIVASK 226 (461)
T ss_dssp HH-------HHHHCTTCCEEECCSSBCHHHHHHHH--HHHHH-------HSCCCCCEEECTTSCCBTTHHHHHHHHHHHC
T ss_pred HH-------HHhhCCCCCEEECcCCCcchHHHHHH--HHHHh-------cCCCCceEEEccCCCCcHHHHHHHHHHHHhC
Confidence 11 12234455555555555443222111 01110 1345788888888888753 45667777
Q ss_pred CCCcEEEccCccccCCC-----CccccCCCcceEEEecccccccc----CCCccCCCCCCcEEeccccccCCcCCccccC
Q 002214 374 KKLQGLDLQNNKFEGPI-----PQEFCHFSRLYVVYLNRNKLSGS----IPSCLGDLNSLRILSLSSNELTSVIPSTFWN 444 (952)
Q Consensus 374 ~~L~~L~L~~N~i~~~~-----~~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 444 (952)
++|++|++++|.+.+.. +..+..+++|+.|++++|.++.. ++..+..+++|++|++++|++++..+..+..
T Consensus 227 ~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 306 (461)
T 1z7x_W 227 ASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCE 306 (461)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHH
T ss_pred CCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHH
Confidence 88888888888776432 22233467777788877777743 4555666777777777777776544333332
Q ss_pred -----CCCCceeEecCCccCCC----CchhhhcccccceeecCCcccCCCCcccccC-----CCCCceEEccCccccC--
Q 002214 445 -----LEDILGFDFSSNSLNGS----LPLEIENLKAVVDIYLSRNNLSGNIPSTIIG-----LKNLQHLSLEHNKLQG-- 508 (952)
Q Consensus 445 -----l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-----l~~L~~L~L~~N~l~~-- 508 (952)
.++|+.|++++|.+++. ++..+..+++|++|+|++|++++..+..+.. .++|++|+|++|++++
T Consensus 307 ~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~ 386 (461)
T 1z7x_W 307 TLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSS 386 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHH
T ss_pred HhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhh
Confidence 25777777777777654 3455566677777777777776544433332 5677777777777764
Q ss_pred --cccccccccccccEEeCCCCccccc
Q 002214 509 --PIPESFGELVSLEFLDLSNNDLSGV 533 (952)
Q Consensus 509 --~~~~~~~~l~~L~~L~Ls~N~l~~~ 533 (952)
.+|..+..+++|++|+|++|++++.
T Consensus 387 ~~~l~~~l~~~~~L~~L~l~~N~i~~~ 413 (461)
T 1z7x_W 387 CSSLAATLLANHSLRELDLSNNCLGDA 413 (461)
T ss_dssp HHHHHHHHHHCCCCCEEECCSSSCCHH
T ss_pred HHHHHHHHHhCCCccEEECCCCCCCHH
Confidence 5566666677777777777777643
No 300
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=1e-32 Score=330.02 Aligned_cols=451 Identities=18% Similarity=0.124 Sum_probs=249.0
Q ss_pred CC-CCceEEEeCCCCeEEEEEecCCCCcccCCccccCCcccCeeecccccc---ccccCCCcC------------CcCCC
Q 002214 20 VC-SWMGITCDVYGNRVTSLTISDLGLAGTIPSHLGNLSSLQTLVLSRNWF---SGTIPKEIG------------NLTKL 83 (952)
Q Consensus 20 ~c-~w~~v~c~~~~~~~~~l~l~~~~~~~~~p~~l~~l~~L~~L~L~~n~l---~~~~p~~l~------------~l~~L 83 (952)
+| +|.++.+... ..+.+..+ +...++..+..+++|+.|+|+++.. .+.+|..++ .+++|
T Consensus 40 vck~W~~~~~~~~----~~l~~~~~-~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L 114 (592)
T 3ogk_B 40 VCRRWFKIDSETR----EHVTMALC-YTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQL 114 (592)
T ss_dssp SCHHHHHHHHHHC----CEEEESCG-GGSCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTC
T ss_pred HhHHHHHhhhccc----cEEEEeec-cccChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCC
Confidence 45 8998854321 23333332 2233455567889999999988643 134454444 56667
Q ss_pred cEEeCcCCcccccCChhhcCC--CCCCeEeecCccCccccCcccccccccccceeeccccccccCCCCCCCCCCccceEE
Q 002214 84 KELHLDYNKLQGEIPEELGNL--AELEMLVLNNNLLTGTIPASIFNLSFISTALDFSDNSLTGSFPYDMCPGLPRLKGLY 161 (952)
Q Consensus 84 ~~L~L~~n~l~~~~p~~l~~l--~~L~~L~L~~n~l~~~~p~~~~~l~~l~~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ 161 (952)
++|+|++|.+.+..+..+... .+|++|+|++|.-. .+..+.. +..++++|++|+
T Consensus 115 ~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~--~~~~l~~----------------------~~~~~~~L~~L~ 170 (592)
T 3ogk_B 115 KSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGF--TTDGLLS----------------------IVTHCRKIKTLL 170 (592)
T ss_dssp CEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEE--EHHHHHH----------------------HHHHCTTCSEEE
T ss_pred CeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCc--CHHHHHH----------------------HHhhCCCCCEEE
Confidence 777777776665555555543 33777777666411 1111110 112456777888
Q ss_pred cccCccccc----CCccccCCCCCcEEEccCCccc----ccCCccccccCCccEEEeeCCcCCccCchhhhccCCCcEee
Q 002214 162 VSYNQFKGP----IPNNLWHCKELSSVSLSYNQFT----GRLPRDLGNSTKLKSLDLGFNNLNGEIPQEIGNLRNLEILG 233 (952)
Q Consensus 162 L~~n~l~~~----~~~~l~~l~~L~~L~L~~N~l~----~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 233 (952)
|++|.+++. ++..+..+++|+.|++++|.++ +.++..+.++++|++|+|++|.+.+ +|..+..+++|+.|+
T Consensus 171 L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~ 249 (592)
T 3ogk_B 171 MEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFC 249 (592)
T ss_dssp CTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEE
T ss_pred CccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhc
Confidence 887776644 2233455677777777777775 2334445567777777777777763 667777777777777
Q ss_pred ecccccc---ccCCccccCCCCccEEEeeCccccccCCCCcccCCCCCcceEEcccCcCCCCCCcccccchhhhhhhccc
Q 002214 234 IDQSNLV---GFVPDTIFNISTLKILSLFNNTLSGNLPSSKNLIGLPNLEGLNLGLNNLSGSIPSFFFNASKLYALELGY 310 (952)
Q Consensus 234 L~~n~~~---~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l~l~~ 310 (952)
++..... ...+..+..+++|+.|+++++... .++. .+..+++|++|+|++|.+++.....
T Consensus 250 l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~--~~~~~~~L~~L~Ls~~~l~~~~~~~-------------- 312 (592)
T 3ogk_B 250 GGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPI--LFPFAAQIRKLDLLYALLETEDHCT-------------- 312 (592)
T ss_dssp ECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGG--GGGGGGGCCEEEETTCCCCHHHHHH--------------
T ss_pred ccccccccchHHHHHHhhccccccccCccccchh-HHHH--HHhhcCCCcEEecCCCcCCHHHHHH--------------
Confidence 7643222 123344555666666666654322 1121 1334555666666665543211100
Q ss_pred cCccccccccCcceeechhhHHHHHHHhhccccccccCCCcccEEEccCCCCC-CCCCcccccCCCCcEEEccC------
Q 002214 311 NSNLKRLGLERNYLTFSTSELMSLFSALVNCKSLKIGNLINLTTLSLGDNNLS-GSLPITLGRLKKLQGLDLQN------ 383 (952)
Q Consensus 311 ~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~l~~l~~L~~L~L~~------ 383 (952)
.+..+++|++|+++ +.+. ..++..+..+++|++|++++
T Consensus 313 ----------------------------------~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~ 357 (592)
T 3ogk_B 313 ----------------------------------LIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQG 357 (592)
T ss_dssp ----------------------------------HHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSST
T ss_pred ----------------------------------HHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccc
Confidence 02345555666665 3332 12222334456666666662
Q ss_pred -----ccccCCC-CccccCCCcceEEEeccccccccCCCccCC-CCCCcEEecc----ccccCCc-----CCccccCCCC
Q 002214 384 -----NKFEGPI-PQEFCHFSRLYVVYLNRNKLSGSIPSCLGD-LNSLRILSLS----SNELTSV-----IPSTFWNLED 447 (952)
Q Consensus 384 -----N~i~~~~-~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-l~~L~~L~L~----~N~l~~~-----~~~~~~~l~~ 447 (952)
|.++... +..+..+++|+.|+++.|.+++..+..+.. +++|+.|+++ .|++++. .+..+.++++
T Consensus 358 ~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~ 437 (592)
T 3ogk_B 358 MEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKK 437 (592)
T ss_dssp TSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTT
T ss_pred cccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCC
Confidence 3443221 111234566666666666665444444443 6667777764 5566543 2223555677
Q ss_pred CceeEecCCc--cCCCCchhhh-cccccceeecCCcccCCC-CcccccCCCCCceEEccCccccCc-ccccccccccccE
Q 002214 448 ILGFDFSSNS--LNGSLPLEIE-NLKAVVDIYLSRNNLSGN-IPSTIIGLKNLQHLSLEHNKLQGP-IPESFGELVSLEF 522 (952)
Q Consensus 448 L~~L~Ls~N~--l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~ 522 (952)
|+.|++++|. +++..+..+. .+++|++|+|++|++++. .+..+.++++|+.|+|++|.+++. ++.....+++|+.
T Consensus 438 L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 517 (592)
T 3ogk_B 438 LRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRY 517 (592)
T ss_dssp CCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCE
T ss_pred CCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCe
Confidence 7777776433 4443333333 367777777777777642 334456677788888888877643 2333456777888
Q ss_pred EeCCCCcccccCccch-hccccccccccccc
Q 002214 523 LDLSNNDLSGVIPASL-EKLLYLKSLNLSFN 552 (952)
Q Consensus 523 L~Ls~N~l~~~~~~~~-~~l~~L~~L~l~~N 552 (952)
|+|++|+++......+ ..++.+....+..+
T Consensus 518 L~ls~n~it~~~~~~l~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 518 LWVQGYRASMTGQDLMQMARPYWNIELIPSR 548 (592)
T ss_dssp EEEESCBCCTTCTTGGGGCCTTEEEEEECCC
T ss_pred eECcCCcCCHHHHHHHHHhCCCcEEEEecCc
Confidence 8888887765432222 34555555544444
No 301
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=8.7e-30 Score=283.24 Aligned_cols=190 Identities=19% Similarity=0.201 Sum_probs=115.7
Q ss_pred cCCCcccEEEccCCCCCCCCC-cccccCCCCcEEEccCc-cccCCCCccccCCCcceEEEeccccccccCCCccCCCCCC
Q 002214 347 GNLINLTTLSLGDNNLSGSLP-ITLGRLKKLQGLDLQNN-KFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSL 424 (952)
Q Consensus 347 ~~l~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~L~~N-~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 424 (952)
+.+++|++|++++|++++..+ ..+..+++|++|++++| .+....+..|.++++|+.|++++|++++..|..+..+++|
T Consensus 121 ~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L 200 (353)
T 2z80_A 121 KPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNV 200 (353)
T ss_dssp TTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEE
T ss_pred CCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccC
Confidence 345566666666666664433 35666666666666666 3554445555555555555555555555555555555555
Q ss_pred cEEeccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCccccc---CCCCCceEEc
Q 002214 425 RILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTII---GLKNLQHLSL 501 (952)
Q Consensus 425 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~---~l~~L~~L~L 501 (952)
++|++++|+++.+.+.. +..+++|+.|++++|++++..+..+. ..+.++.++|
T Consensus 201 ~~L~l~~n~l~~~~~~~------------------------~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L 256 (353)
T 2z80_A 201 SHLILHMKQHILLLEIF------------------------VDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTF 256 (353)
T ss_dssp EEEEEECSCSTTHHHHH------------------------HHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEE
T ss_pred CeecCCCCccccchhhh------------------------hhhcccccEEECCCCccccccccccccccccchhhcccc
Confidence 55555555554333222 33445555555555555544333222 3456777777
Q ss_pred cCccccC----cccccccccccccEEeCCCCcccccCccchhcccccccccccccccccCCCC
Q 002214 502 EHNKLQG----PIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFNKLVGEIPR 560 (952)
Q Consensus 502 ~~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~ 560 (952)
++|.+++ .+|..+..+++|+.|+|++|+|+.+.+..|..+++|++|++++|++.|.+|.
T Consensus 257 ~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~~ 319 (353)
T 2z80_A 257 RNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 319 (353)
T ss_dssp ESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred ccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCCC
Confidence 7777664 3567788888888888888888854444468888888888888888888773
No 302
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=7.5e-30 Score=283.76 Aligned_cols=213 Identities=22% Similarity=0.262 Sum_probs=153.8
Q ss_pred ccCCCCCCCCCceEEEeCCCCeEEEEEecCCCCcccCCccccCCcccCeeeccccccccccCCCcCCcCCCcEEeCcCCc
Q 002214 13 NWTSNASVCSWMGITCDVYGNRVTSLTISDLGLAGTIPSHLGNLSSLQTLVLSRNWFSGTIPKEIGNLTKLKELHLDYNK 92 (952)
Q Consensus 13 ~~~~~~~~c~w~~v~c~~~~~~~~~l~l~~~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~ 92 (952)
.|......|.|.|+ |+. ++++++ .+|..+. ++|++|++++|.+++..+..+..+++|++|+|++|+
T Consensus 22 ~~~~~~~~C~~~~~-c~~----------~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 87 (353)
T 2z80_A 22 SSNQASLSCDRNGI-CKG----------SSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNG 87 (353)
T ss_dssp -----CCEECTTSE-EEC----------CSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSC
T ss_pred CCCccCCCCCCCeE-eeC----------CCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCc
Confidence 44445678999987 764 556665 6777665 589999999999996666689999999999999999
Q ss_pred ccccCChhhcCCCCCCeEeecCccCccccCcccccccccccceeeccccccccCCCCCCCCCCccceEEcccCcccccCC
Q 002214 93 LQGEIPEELGNLAELEMLVLNNNLLTGTIPASIFNLSFISTALDFSDNSLTGSFPYDMCPGLPRLKGLYVSYNQFKGPIP 172 (952)
Q Consensus 93 l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~l~~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 172 (952)
+.+..|.+|+++++|++|+|++|+++ .+|.. .+.++++|++|+|++|+++...+
T Consensus 88 l~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~-------------------------~~~~l~~L~~L~L~~n~l~~l~~ 141 (353)
T 2z80_A 88 INTIEEDSFSSLGSLEHLDLSYNYLS-NLSSS-------------------------WFKPLSSLTFLNLLGNPYKTLGE 141 (353)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCS-SCCHH-------------------------HHTTCTTCSEEECTTCCCSSSCS
T ss_pred cCccCHhhcCCCCCCCEEECCCCcCC-cCCHh-------------------------HhCCCccCCEEECCCCCCcccCc
Confidence 99877888999999999999999988 34333 12345677777777777774322
Q ss_pred -ccccCCCCCcEEEccCC-cccccCCccccccCCccEEEeeCCcCCccCchhhhccCCCcEeeeccccccccCCccccCC
Q 002214 173 -NNLWHCKELSSVSLSYN-QFTGRLPRDLGNSTKLKSLDLGFNNLNGEIPQEIGNLRNLEILGIDQSNLVGFVPDTIFNI 250 (952)
Q Consensus 173 -~~l~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l 250 (952)
..+..+++|+.|++++| .++...+..|+++++|++|++++|.+++..|..|+.+++|++|++++|++....+..+..+
T Consensus 142 ~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~ 221 (353)
T 2z80_A 142 TSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVT 221 (353)
T ss_dssp SCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHT
T ss_pred hhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhc
Confidence 36677777777777777 4665666677777777777777777776667777777777777777777655444444456
Q ss_pred CCccEEEeeCccccc
Q 002214 251 STLKILSLFNNTLSG 265 (952)
Q Consensus 251 ~~L~~L~Ls~N~l~~ 265 (952)
++|+.|++++|.+++
T Consensus 222 ~~L~~L~L~~n~l~~ 236 (353)
T 2z80_A 222 SSVECLELRDTDLDT 236 (353)
T ss_dssp TTEEEEEEESCBCTT
T ss_pred ccccEEECCCCcccc
Confidence 777777777777664
No 303
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=1.3e-29 Score=272.82 Aligned_cols=236 Identities=22% Similarity=0.232 Sum_probs=213.7
Q ss_pred CCCcccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCccccCCCcceEEEecccc-ccccCCCccCCCCCCcE
Q 002214 348 NLINLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNK-LSGSIPSCLGDLNSLRI 426 (952)
Q Consensus 348 ~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~ 426 (952)
..++|++|++++|.+++..+..|..+++|++|++++|.+++..+..|..+++|++|++++|+ +....|..|..+++|++
T Consensus 30 ~~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~ 109 (285)
T 1ozn_A 30 IPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHT 109 (285)
T ss_dssp CCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCE
T ss_pred CCCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCE
Confidence 35689999999999998888899999999999999999998889999999999999999997 88777889999999999
Q ss_pred EeccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEccCccc
Q 002214 427 LSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNKL 506 (952)
Q Consensus 427 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 506 (952)
|++++|++++..+..|..+++|+.|++++|++++..+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|++
T Consensus 110 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 189 (285)
T 1ozn_A 110 LHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRV 189 (285)
T ss_dssp EECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred EECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcc
Confidence 99999999999899999999999999999999987777899999999999999999987778899999999999999999
Q ss_pred cCcccccccccccccEEeCCCCcccccCccchhcccccccccccccccccCCCCCCCcccccccccccCccCCCCCc
Q 002214 507 QGPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFNKLVGEIPRGGAFANFSAESFIGNDLLCGSPY 583 (952)
Q Consensus 507 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~p~ 583 (952)
++..|..|..+++|+.|+|++|++++..+..+..+++|+.|++++|++.|.++....+.++.......+...|..|.
T Consensus 190 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~~~~l~~~~~~~~~~~c~~p~ 266 (285)
T 1ozn_A 190 AHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCSLPQ 266 (285)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGHHHHHHHHHCCSEECCCBEEESG
T ss_pred cccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcHHHHHHHHhcccccCccccCCch
Confidence 98889999999999999999999998888889999999999999999999888655555666666666777777663
No 304
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=2.4e-29 Score=273.87 Aligned_cols=183 Identities=21% Similarity=0.311 Sum_probs=98.0
Q ss_pred CCCcccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCC-ccccCCCcceEEEeccccccccCCCccCCCCCCcE
Q 002214 348 NLINLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIP-QEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLRI 426 (952)
Q Consensus 348 ~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 426 (952)
.+++|++|++++|.++ .+|..+..+++|++|++++|.+++..+ ..|..+++|++|++++|.+.+..+..+..+++|++
T Consensus 76 ~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 154 (306)
T 2z66_A 76 GTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEV 154 (306)
T ss_dssp SCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCE
T ss_pred cccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCE
Confidence 3455666666666665 344445566666666666666654443 45555555555555555555555555555555555
Q ss_pred EeccccccCC-cCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEccCcc
Q 002214 427 LSLSSNELTS-VIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNK 505 (952)
Q Consensus 427 L~L~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 505 (952)
|++++|++++ ..|..|..+++|+.|++++|++++..|..+..+++|+.|+|++|++++..+..|..+++|+.|+|++|+
T Consensus 155 L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 234 (306)
T 2z66_A 155 LKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNH 234 (306)
T ss_dssp EECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSC
T ss_pred EECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCC
Confidence 5555555554 344555555555555555555554444455555555555555555554444444445555555555555
Q ss_pred ccCcccccccccc-cccEEeCCCCccc
Q 002214 506 LQGPIPESFGELV-SLEFLDLSNNDLS 531 (952)
Q Consensus 506 l~~~~~~~~~~l~-~L~~L~Ls~N~l~ 531 (952)
+++..|..+..++ +|+.|+|++|+++
T Consensus 235 l~~~~~~~~~~~~~~L~~L~L~~N~~~ 261 (306)
T 2z66_A 235 IMTSKKQELQHFPSSLAFLNLTQNDFA 261 (306)
T ss_dssp CCBCSSSSCCCCCTTCCEEECTTCCEE
T ss_pred CcccCHHHHHhhhccCCEEEccCCCee
Confidence 5544444444442 4555555555544
No 305
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=5.8e-29 Score=270.84 Aligned_cols=194 Identities=18% Similarity=0.209 Sum_probs=138.2
Q ss_pred cCCCcccEEEccCCCCCCCCC-cccccCCCCcEEEccCccccCCCCccccCCCcceEEEeccccccc-cCCCccCCCCCC
Q 002214 347 GNLINLTTLSLGDNNLSGSLP-ITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSG-SIPSCLGDLNSL 424 (952)
Q Consensus 347 ~~l~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L 424 (952)
..+++|++|++++|++++..+ ..+..+++|++|++++|.+.+..+..|..+++|++|++++|.+++ ..|..+..+++|
T Consensus 98 ~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L 177 (306)
T 2z66_A 98 LGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNL 177 (306)
T ss_dssp ETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTC
T ss_pred CCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCC
Confidence 345566777777777765544 567777888888888888877777778888888888888888875 567778888888
Q ss_pred cEEeccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCC-CCceEEccC
Q 002214 425 RILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLK-NLQHLSLEH 503 (952)
Q Consensus 425 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~L~~ 503 (952)
++|++++|++++..|..|..+++|+.|++++|++++..+..+..+++|+.|+|++|++++..|..+..++ +|++|+|++
T Consensus 178 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~ 257 (306)
T 2z66_A 178 TFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQ 257 (306)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTT
T ss_pred CEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccC
Confidence 8888888888877778888888888888888888876666778888888888888888877777777774 788888888
Q ss_pred ccccCccc--ccccccccccEEeCCCCcccccCccchhc
Q 002214 504 NKLQGPIP--ESFGELVSLEFLDLSNNDLSGVIPASLEK 540 (952)
Q Consensus 504 N~l~~~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 540 (952)
|++++..+ .....+..++.+.+..+.+....|..+.+
T Consensus 258 N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~~~~g 296 (306)
T 2z66_A 258 NDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSDKQG 296 (306)
T ss_dssp CCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESGGGTT
T ss_pred CCeecccChHHHHHHHHhhhhhhccccccccCCchhhCC
Confidence 88875322 11122333334444444444444444433
No 306
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=1.8e-28 Score=282.12 Aligned_cols=213 Identities=22% Similarity=0.276 Sum_probs=179.4
Q ss_pred ccCCCcccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCccCCCCCCc
Q 002214 346 IGNLINLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLR 425 (952)
Q Consensus 346 ~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 425 (952)
|+++++|++|+|++|+|+++.+..|.++++|++|+|++|.|+.+.+..|..+++|++|+|++|++++..+..|..+++|+
T Consensus 95 ~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 174 (452)
T 3zyi_A 95 FRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLM 174 (452)
T ss_dssp TTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCC
T ss_pred cCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCccc
Confidence 34567788888888888877778888888888888888888877777788888888888888888877777888888888
Q ss_pred EEeccc-cccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEccCc
Q 002214 426 ILSLSS-NELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHN 504 (952)
Q Consensus 426 ~L~L~~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 504 (952)
.|++++ |.+..+.+..|.++++|+.|+|++|++++. | .+..+++|+.|+|++|++++..|..|.++++|+.|+|++|
T Consensus 175 ~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n 252 (452)
T 3zyi_A 175 RLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNS 252 (452)
T ss_dssp EEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTS
T ss_pred EEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCC
Confidence 888888 556666666788888888888888888853 3 4778889999999999999888889999999999999999
Q ss_pred cccCcccccccccccccEEeCCCCcccccCccchhcccccccccccccccccCCCC
Q 002214 505 KLQGPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFNKLVGEIPR 560 (952)
Q Consensus 505 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~ 560 (952)
++++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|.|.+..
T Consensus 253 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~~ 308 (452)
T 3zyi_A 253 QVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDI 308 (452)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTTT
T ss_pred cCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCCc
Confidence 99988888899999999999999999988888888899999999999999988764
No 307
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=1.9e-28 Score=280.86 Aligned_cols=213 Identities=23% Similarity=0.295 Sum_probs=184.4
Q ss_pred ccCCCcccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCccCCCCCCc
Q 002214 346 IGNLINLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLR 425 (952)
Q Consensus 346 ~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 425 (952)
|.++++|++|+|++|+++++.+..|.++++|++|+|++|+|+.+.+..|..+++|++|+|++|+|+...+..|..+++|+
T Consensus 84 ~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~ 163 (440)
T 3zyj_A 84 FKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLR 163 (440)
T ss_dssp TSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCC
T ss_pred hhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccC
Confidence 45667788888888888877778888888888888888888877777888888888888888888877777888888999
Q ss_pred EEeccc-cccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEccCc
Q 002214 426 ILSLSS-NELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHN 504 (952)
Q Consensus 426 ~L~L~~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 504 (952)
+|++++ |.+..+.+..|.++++|+.|++++|+++. +| .+..+++|+.|+|++|++++..|..|.++++|+.|+|++|
T Consensus 164 ~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n 241 (440)
T 3zyj_A 164 RLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQS 241 (440)
T ss_dssp EEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTC
T ss_pred EeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-cc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCC
Confidence 999988 55666666688889999999999998884 44 4788899999999999999888999999999999999999
Q ss_pred cccCcccccccccccccEEeCCCCcccccCccchhcccccccccccccccccCCCC
Q 002214 505 KLQGPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFNKLVGEIPR 560 (952)
Q Consensus 505 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~ 560 (952)
+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|.|.+..
T Consensus 242 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~l 297 (440)
T 3zyj_A 242 QIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCDI 297 (440)
T ss_dssp CCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSSTT
T ss_pred ceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCCCc
Confidence 99988888999999999999999999988888889999999999999999998864
No 308
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=2.3e-28 Score=287.92 Aligned_cols=289 Identities=27% Similarity=0.320 Sum_probs=172.3
Q ss_pred ccCCCCCCCCCceEEEe------CCCCeEEEEEecCCCCcccCCccccCCcccCeeeccccccccccCCCcCCcCCCcEE
Q 002214 13 NWTSNASVCSWMGITCD------VYGNRVTSLTISDLGLAGTIPSHLGNLSSLQTLVLSRNWFSGTIPKEIGNLTKLKEL 86 (952)
Q Consensus 13 ~~~~~~~~c~w~~v~c~------~~~~~~~~l~l~~~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 86 (952)
.|...+++|+|.|..|. ....++++|++++++++ .+|..+. ++|+.|+|++|.|+ .+|. .+++|++|
T Consensus 14 ~W~~~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L 86 (622)
T 3g06_A 14 AWRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTL 86 (622)
T ss_dssp HHHHTCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEE
T ss_pred HHHhcCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEE
Confidence 68766789999876532 22345777888888877 6776665 67788888888777 5665 45777777
Q ss_pred eCcCCcccccCChhhcCCCCCCeEeecCccCccccCcccccccccccceeeccccccccCCCCCCCCCCccceEEcccCc
Q 002214 87 HLDYNKLQGEIPEELGNLAELEMLVLNNNLLTGTIPASIFNLSFISTALDFSDNSLTGSFPYDMCPGLPRLKGLYVSYNQ 166 (952)
Q Consensus 87 ~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~l~~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~ 166 (952)
+|++|+++ .+|. .+++|++|+|++|.++ .+|. .+++|+.|++++|+
T Consensus 87 ~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~l~~-----------------------------~l~~L~~L~L~~N~ 132 (622)
T 3g06_A 87 EVSGNQLT-SLPV---LPPGLLELSIFSNPLT-HLPA-----------------------------LPSGLCKLWIFGNQ 132 (622)
T ss_dssp EECSCCCS-CCCC---CCTTCCEEEECSCCCC-CCCC-----------------------------CCTTCCEEECCSSC
T ss_pred EcCCCcCC-cCCC---CCCCCCEEECcCCcCC-CCCC-----------------------------CCCCcCEEECCCCC
Confidence 77777777 4554 5677777777777766 2222 13456666666666
Q ss_pred ccccCCccccCCCCCcEEEccCCcccccCCccccccCCccEEEeeCCcCCccCchhhhccCCCcEeeeccccccccCCcc
Q 002214 167 FKGPIPNNLWHCKELSSVSLSYNQFTGRLPRDLGNSTKLKSLDLGFNNLNGEIPQEIGNLRNLEILGIDQSNLVGFVPDT 246 (952)
Q Consensus 167 l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~ 246 (952)
++. +|.. +++|++|+|++|++++ +|. ..++|+.|++++|.+++ +| ..+
T Consensus 133 l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l~---~~~-------------------- 180 (622)
T 3g06_A 133 LTS-LPVL---PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS-LP---MLP-------------------- 180 (622)
T ss_dssp CSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CC---CCC--------------------
T ss_pred CCc-CCCC---CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC-Cc---ccC--------------------
Confidence 553 3332 2555555555555553 232 22445555555555552 33 223
Q ss_pred ccCCCCccEEEeeCccccccCCCCcccCCCCCcceEEcccCcCCCCCCcccccchhhhhhhccccCccccccccCcceee
Q 002214 247 IFNISTLKILSLFNNTLSGNLPSSKNLIGLPNLEGLNLGLNNLSGSIPSFFFNASKLYALELGYNSNLKRLGLERNYLTF 326 (952)
Q Consensus 247 ~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l~l~~~~~L~~L~L~~n~l~~ 326 (952)
++|+.|++++|+|++. |. .+++|+.|++++|.++.+ |.
T Consensus 181 ----~~L~~L~Ls~N~l~~l-~~-----~~~~L~~L~L~~N~l~~l-~~------------------------------- 218 (622)
T 3g06_A 181 ----SGLQELSVSDNQLASL-PT-----LPSELYKLWAYNNRLTSL-PA------------------------------- 218 (622)
T ss_dssp ----TTCCEEECCSSCCSCC-CC-----CCTTCCEEECCSSCCSSC-CC-------------------------------
T ss_pred ----CCCcEEECCCCCCCCC-CC-----ccchhhEEECcCCccccc-CC-------------------------------
Confidence 4444455555544421 11 124555555555555421 11
Q ss_pred chhhHHHHHHHhhccccccccCCCcccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCccccCCCcceEEEec
Q 002214 327 STSELMSLFSALVNCKSLKIGNLINLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLN 406 (952)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~ 406 (952)
.+++|+.|+|++|+|++ +| ..+++|++|+|++|.|+. +|. .+++|+.|+|+
T Consensus 219 ---------------------~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls 269 (622)
T 3g06_A 219 ---------------------LPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVY 269 (622)
T ss_dssp ---------------------CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECC
T ss_pred ---------------------CCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCC
Confidence 12345666666666664 23 344667777777777663 333 45667777777
Q ss_pred cccccccCCCccCCCCCCcEEeccccccCCcCCccccCCC
Q 002214 407 RNKLSGSIPSCLGDLNSLRILSLSSNELTSVIPSTFWNLE 446 (952)
Q Consensus 407 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 446 (952)
+|+|+ .+|..+..+++|+.|+|++|.+++..+..+..++
T Consensus 270 ~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 270 RNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp SSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred CCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 77777 5566777778888888888888777666665544
No 309
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=1.2e-27 Score=257.43 Aligned_cols=253 Identities=23% Similarity=0.225 Sum_probs=209.8
Q ss_pred cEEEeeCccccccCCCCcccCCCCCcceEEcccCcCCCCCCcccccchhhhhhhccccCccccccccCcceeechhhHHH
Q 002214 254 KILSLFNNTLSGNLPSSKNLIGLPNLEGLNLGLNNLSGSIPSFFFNASKLYALELGYNSNLKRLGLERNYLTFSTSELMS 333 (952)
Q Consensus 254 ~~L~Ls~N~l~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l~l~~~~~L~~L~L~~n~l~~~~~~~~~ 333 (952)
+.++++++.++.. |. ...++|++|++++|++++..+..
T Consensus 14 ~~~~c~~~~l~~i-p~----~~~~~l~~L~l~~n~i~~~~~~~------------------------------------- 51 (285)
T 1ozn_A 14 VTTSCPQQGLQAV-PV----GIPAASQRIFLHGNRISHVPAAS------------------------------------- 51 (285)
T ss_dssp CEEECCSSCCSSC-CT----TCCTTCSEEECTTSCCCEECTTT-------------------------------------
T ss_pred eEEEcCcCCcccC-Cc----CCCCCceEEEeeCCcCCccCHHH-------------------------------------
Confidence 5677777777633 32 12357788888888777554433
Q ss_pred HHHHhhccccccccCCCcccEEEccCCCCCCCCCcccccCCCCcEEEccCcc-ccCCCCccccCCCcceEEEeccccccc
Q 002214 334 LFSALVNCKSLKIGNLINLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNK-FEGPIPQEFCHFSRLYVVYLNRNKLSG 412 (952)
Q Consensus 334 ~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~-i~~~~~~~~~~l~~L~~L~L~~N~l~~ 412 (952)
++.+++|++|++++|.+++..+..|..+++|++|++++|. +....+..|..+++|++|++++|++++
T Consensus 52 ------------~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 119 (285)
T 1ozn_A 52 ------------FRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQE 119 (285)
T ss_dssp ------------TTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCC
T ss_pred ------------cccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCE
Confidence 3566788889999999988878889999999999999997 887778889999999999999999998
Q ss_pred cCCCccCCCCCCcEEeccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccC
Q 002214 413 SIPSCLGDLNSLRILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIG 492 (952)
Q Consensus 413 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 492 (952)
..+..|..+++|++|++++|+++++.+..|..+++|+.|++++|++++..+..|..+++|+.|+|++|++++..|..|..
T Consensus 120 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 199 (285)
T 1ozn_A 120 LGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRD 199 (285)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTT
T ss_pred ECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccC
Confidence 88888999999999999999999888888999999999999999999777777999999999999999999888999999
Q ss_pred CCCCceEEccCccccCcccccccccccccEEeCCCCcccccCccchhcccccccccccccccccCCCCC
Q 002214 493 LKNLQHLSLEHNKLQGPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFNKLVGEIPRG 561 (952)
Q Consensus 493 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~ 561 (952)
+++|+.|+|++|++++..+..+..+++|+.|+|++|++....+. ..-+..++.+..+.|.+.|..|..
T Consensus 200 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~-~~~~~~l~~~~~~~~~~~c~~p~~ 267 (285)
T 1ozn_A 200 LGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRA-RPLWAWLQKFRGSSSEVPCSLPQR 267 (285)
T ss_dssp CTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGG-HHHHHHHHHCCSEECCCBEEESGG
T ss_pred cccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCc-HHHHHHHHhcccccCccccCCchH
Confidence 99999999999999987777899999999999999999854332 233455777888899999988863
No 310
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=9.3e-28 Score=276.21 Aligned_cols=234 Identities=23% Similarity=0.214 Sum_probs=214.5
Q ss_pred CCcccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCccCCCCCCcEEe
Q 002214 349 LINLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLRILS 428 (952)
Q Consensus 349 l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 428 (952)
.+++++|+|++|+|+++.+..|.++++|++|+|++|.|+++.+..|.++++|++|+|++|++++..+..|..+++|++|+
T Consensus 74 ~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 153 (452)
T 3zyi_A 74 PSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELW 153 (452)
T ss_dssp CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEE
T ss_pred CCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEE
Confidence 36899999999999999999999999999999999999999999999999999999999999988888899999999999
Q ss_pred ccccccCCcCCccccCCCCCceeEecC-CccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEccCcccc
Q 002214 429 LSSNELTSVIPSTFWNLEDILGFDFSS-NSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNKLQ 507 (952)
Q Consensus 429 L~~N~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 507 (952)
|++|+++++.+..|..+++|+.|++++ |.+....+..|.++++|++|+|++|++++. | .+..+++|+.|+|++|+|+
T Consensus 154 L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~ 231 (452)
T 3zyi_A 154 LRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFP 231 (452)
T ss_dssp CCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCS
T ss_pred CCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCc
Confidence 999999999899999999999999999 556655566799999999999999999964 4 5889999999999999999
Q ss_pred CcccccccccccccEEeCCCCcccccCccchhcccccccccccccccccCCCCC-CCcccccccccccCccCCCCCcc
Q 002214 508 GPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFNKLVGEIPRG-GAFANFSAESFIGNDLLCGSPYL 584 (952)
Q Consensus 508 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~~~~~~~~~~n~~~c~~p~~ 584 (952)
+..|..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|++++..+.. ..+.++....+.+|||.|+|...
T Consensus 232 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~~~ 309 (452)
T 3zyi_A 232 EIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDIL 309 (452)
T ss_dssp EECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTTTH
T ss_pred ccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCCch
Confidence 988999999999999999999999999999999999999999999999766543 34667777889999999999854
No 311
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=1e-27 Score=274.92 Aligned_cols=234 Identities=22% Similarity=0.224 Sum_probs=214.0
Q ss_pred CCcccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCccCCCCCCcEEe
Q 002214 349 LINLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLRILS 428 (952)
Q Consensus 349 l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 428 (952)
.++++.|+|++|+++++.+..|.++++|++|+|++|.|+++.+..|.++++|++|+|++|+|++..+..|..+++|++|+
T Consensus 63 ~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 142 (440)
T 3zyj_A 63 STNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELW 142 (440)
T ss_dssp CTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEE
T ss_pred CCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceee
Confidence 36899999999999988889999999999999999999999999999999999999999999988788899999999999
Q ss_pred ccccccCCcCCccccCCCCCceeEecCC-ccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEccCcccc
Q 002214 429 LSSNELTSVIPSTFWNLEDILGFDFSSN-SLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNKLQ 507 (952)
Q Consensus 429 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N-~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 507 (952)
|++|+++++.+..|..+++|+.|++++| .+....+..|.++++|++|+|++|+++. +| .+..+++|+.|+|++|+|+
T Consensus 143 L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~ 220 (440)
T 3zyj_A 143 LRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IP-NLTPLIKLDELDLSGNHLS 220 (440)
T ss_dssp CCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CC-CCTTCSSCCEEECTTSCCC
T ss_pred CCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-cc-ccCCCcccCEEECCCCccC
Confidence 9999999999999999999999999994 5665556689999999999999999995 44 4889999999999999999
Q ss_pred CcccccccccccccEEeCCCCcccccCccchhcccccccccccccccccCCCCC-CCcccccccccccCccCCCCCcc
Q 002214 508 GPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFNKLVGEIPRG-GAFANFSAESFIGNDLLCGSPYL 584 (952)
Q Consensus 508 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~~~~~~~~~~n~~~c~~p~~ 584 (952)
+..|..|..+++|+.|+|++|+|++..+..|.++++|+.|+|++|++++..+.. ..+.++....+.+|||.|+|...
T Consensus 221 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~l~ 298 (440)
T 3zyj_A 221 AIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCDIL 298 (440)
T ss_dssp EECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSSTTH
T ss_pred ccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCCCch
Confidence 888999999999999999999999999999999999999999999999766543 34567777889999999999754
No 312
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.95 E-value=3.7e-30 Score=307.84 Aligned_cols=350 Identities=14% Similarity=0.089 Sum_probs=240.4
Q ss_pred cceEEcccCc-ccc-cCCccccCCCCCcEEEccCCccccc----CCccccccCCccEEEeeCCcCC----ccCchhhhcc
Q 002214 157 LKGLYVSYNQ-FKG-PIPNNLWHCKELSSVSLSYNQFTGR----LPRDLGNSTKLKSLDLGFNNLN----GEIPQEIGNL 226 (952)
Q Consensus 157 L~~L~L~~n~-l~~-~~~~~l~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~----~~~p~~~~~l 226 (952)
|++|+|++|. +.. .++.....+++|++|+|++|.+++. ++..+..+++|++|+|++|.++ +.++..+..+
T Consensus 140 L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~ 219 (592)
T 3ogk_B 140 LETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNC 219 (592)
T ss_dssp CCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHC
T ss_pred CcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhC
Confidence 7777777765 211 1122223667788888888777644 2234456677788888777776 2344455667
Q ss_pred CCCcEeeeccccccccCCccccCCCCccEEEeeCcccc-ccCCCCcccCCCCCcceEEcccCcCCCCCCcccccchhhhh
Q 002214 227 RNLEILGIDQSNLVGFVPDTIFNISTLKILSLFNNTLS-GNLPSSKNLIGLPNLEGLNLGLNNLSGSIPSFFFNASKLYA 305 (952)
Q Consensus 227 ~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~ 305 (952)
++|+.|++++|.+.+ ++..+..+++|++|+++.+... ...+....+..+++|+.|+++++... ..|.
T Consensus 220 ~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~---------- 287 (592)
T 3ogk_B 220 RSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPI---------- 287 (592)
T ss_dssp TTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGG----------
T ss_pred CCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchh-HHHH----------
Confidence 777777777777665 3466677777777777753221 00111223445556666666553221 1111
Q ss_pred hhccccCccccccccCcceeechhhHHHHHHHhhccccccccCCCcccEEEccCCCCCCCCC-cccccCCCCcEEEccCc
Q 002214 306 LELGYNSNLKRLGLERNYLTFSTSELMSLFSALVNCKSLKIGNLINLTTLSLGDNNLSGSLP-ITLGRLKKLQGLDLQNN 384 (952)
Q Consensus 306 l~l~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~L~~N 384 (952)
.+..+++|++|+|++|.+++... ..+..+++|++|+++++
T Consensus 288 ---------------------------------------~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~ 328 (592)
T 3ogk_B 288 ---------------------------------------LFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNV 328 (592)
T ss_dssp ---------------------------------------GGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGG
T ss_pred ---------------------------------------HHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCc
Confidence 13467789999999999874433 44688999999999944
Q ss_pred cccCCCCccccCCCcceEEEec-----------ccccccc-CCCccCCCCCCcEEeccccccCCcCCccccC-CCCCcee
Q 002214 385 KFEGPIPQEFCHFSRLYVVYLN-----------RNKLSGS-IPSCLGDLNSLRILSLSSNELTSVIPSTFWN-LEDILGF 451 (952)
Q Consensus 385 ~i~~~~~~~~~~l~~L~~L~L~-----------~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-l~~L~~L 451 (952)
......+..+..+++|+.|+++ .|.++.. ++..+..+++|++|+++.|++++..+..+.. +++|+.|
T Consensus 329 ~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L 408 (592)
T 3ogk_B 329 IGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDF 408 (592)
T ss_dssp GHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEE
T ss_pred cCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEE
Confidence 3333334445678999999999 3666643 2233456899999999999998776666665 8999999
Q ss_pred Eec----CCccCCC-----CchhhhcccccceeecCCc--ccCCCCccccc-CCCCCceEEccCccccC-cccccccccc
Q 002214 452 DFS----SNSLNGS-----LPLEIENLKAVVDIYLSRN--NLSGNIPSTII-GLKNLQHLSLEHNKLQG-PIPESFGELV 518 (952)
Q Consensus 452 ~Ls----~N~l~~~-----~~~~~~~l~~L~~L~Ls~N--~l~~~~~~~~~-~l~~L~~L~L~~N~l~~-~~~~~~~~l~ 518 (952)
+++ .|.+++. ++..+.++++|++|+|++| .+++..+..+. .+++|++|+|++|++++ .++..+..++
T Consensus 409 ~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~ 488 (592)
T 3ogk_B 409 RLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCP 488 (592)
T ss_dssp EEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCT
T ss_pred EEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCc
Confidence 996 7788864 3445778999999999854 36654444443 48999999999999986 3455668899
Q ss_pred cccEEeCCCCccccc-CccchhcccccccccccccccccC
Q 002214 519 SLEFLDLSNNDLSGV-IPASLEKLLYLKSLNLSFNKLVGE 557 (952)
Q Consensus 519 ~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~l~~N~l~~~ 557 (952)
+|+.|+|++|.+++. ++..+..+++|+.|++++|+++..
T Consensus 489 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 489 NLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp TCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred ccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHH
Confidence 999999999998754 445557899999999999998754
No 313
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=1.5e-28 Score=268.52 Aligned_cols=267 Identities=22% Similarity=0.200 Sum_probs=163.5
Q ss_pred CcEEEccCCcccccCCccccccCCccEEEeeCCcCCccCchhhhccCCCcEeeeccccccccCCccccCCCCccEEEeeC
Q 002214 181 LSSVSLSYNQFTGRLPRDLGNSTKLKSLDLGFNNLNGEIPQEIGNLRNLEILGIDQSNLVGFVPDTIFNISTLKILSLFN 260 (952)
Q Consensus 181 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~ 260 (952)
++.++++.+.+...+...+..+++|++|+|++|.+++..|..|..+++|+.|+|++|++.+..+ +..+++|++|++++
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~ 89 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNN 89 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCS
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcC
Confidence 3445666666665555555566677777777777776666677777777777777666655443 55556666666666
Q ss_pred ccccccCCCCcccCCCCCcceEEcccCcCCCCCCcccccchhhhhhhccccCccccccccCcceeechhhHHHHHHHhhc
Q 002214 261 NTLSGNLPSSKNLIGLPNLEGLNLGLNNLSGSIPSFFFNASKLYALELGYNSNLKRLGLERNYLTFSTSELMSLFSALVN 340 (952)
Q Consensus 261 N~l~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l~l~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~ 340 (952)
|++++.. ..++
T Consensus 90 n~l~~l~-------~~~~-------------------------------------------------------------- 100 (317)
T 3o53_A 90 NYVQELL-------VGPS-------------------------------------------------------------- 100 (317)
T ss_dssp SEEEEEE-------ECTT--------------------------------------------------------------
T ss_pred Ccccccc-------CCCC--------------------------------------------------------------
Confidence 6554221 1133
Q ss_pred cccccccCCCcccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCcc-C
Q 002214 341 CKSLKIGNLINLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCL-G 419 (952)
Q Consensus 341 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~ 419 (952)
|++|++++|++++..+.. +++|++|++++|++++..+..|..+++|++|+|++|++++..+..+ .
T Consensus 101 -----------L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 166 (317)
T 3o53_A 101 -----------IETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAA 166 (317)
T ss_dssp -----------CCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGG
T ss_pred -----------cCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhh
Confidence 444444444444322221 3445555555555554444444444445555555554444333333 2
Q ss_pred CCCCCcEEeccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceE
Q 002214 420 DLNSLRILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHL 499 (952)
Q Consensus 420 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 499 (952)
.+++|++|++++|+++++.+ ...+++|++|+|++|++++. |..|..+++|+.|
T Consensus 167 ~l~~L~~L~L~~N~l~~~~~--------------------------~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L 219 (317)
T 3o53_A 167 SSDTLEHLNLQYNFIYDVKG--------------------------QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWI 219 (317)
T ss_dssp GTTTCCEEECTTSCCCEEEC--------------------------CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEE
T ss_pred ccCcCCEEECCCCcCccccc--------------------------ccccccCCEEECCCCcCCcc-hhhhcccCcccEE
Confidence 45556666666666554311 11245566666666666644 3347778888888
Q ss_pred EccCccccCcccccccccccccEEeCCCCccc-ccCccchhccccccccccc-ccccccCCCC
Q 002214 500 SLEHNKLQGPIPESFGELVSLEFLDLSNNDLS-GVIPASLEKLLYLKSLNLS-FNKLVGEIPR 560 (952)
Q Consensus 500 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~l~-~N~l~~~~p~ 560 (952)
+|++|+|+ .+|..+..+++|+.|+|++|+++ +.+|..+..+++|+.|+++ .+.+.|..|.
T Consensus 220 ~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 220 SLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp ECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSC
T ss_pred ECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchh
Confidence 88888888 46778888999999999999998 6788889999999999999 4556665543
No 314
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=2.2e-26 Score=270.99 Aligned_cols=167 Identities=28% Similarity=0.308 Sum_probs=99.4
Q ss_pred cccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCccCCCCCCcEEecc
Q 002214 351 NLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLRILSLS 430 (952)
Q Consensus 351 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 430 (952)
+|++|+|++|+++++ |. .+++|+.|++++|.|++ .| ..+++|+.|++++|+|++ +|. .+++|+.|+++
T Consensus 142 ~L~~L~Ls~N~l~~l-~~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~ 209 (622)
T 3g06_A 142 GLQELSVSDNQLASL-PA---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPT---LPSELYKLWAY 209 (622)
T ss_dssp TCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECC
T ss_pred CCCEEECcCCcCCCc-CC---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCC---ccchhhEEECc
Confidence 344444444444422 21 12445555555555543 22 223455555555555552 222 13556666666
Q ss_pred ccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEccCccccCcc
Q 002214 431 SNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNKLQGPI 510 (952)
Q Consensus 431 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 510 (952)
+|.++.++. .+++|+.|++++|+|++ +| ..+++|+.|+|++|+|+. +|. .+++|+.|+|++|+|+ .+
T Consensus 210 ~N~l~~l~~----~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~l 276 (622)
T 3g06_A 210 NNRLTSLPA----LPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RL 276 (622)
T ss_dssp SSCCSSCCC----CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SC
T ss_pred CCcccccCC----CCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cC
Confidence 666664332 23566666666666664 33 345667777777777774 343 5677888888888888 56
Q ss_pred cccccccccccEEeCCCCcccccCccchhccc
Q 002214 511 PESFGELVSLEFLDLSNNDLSGVIPASLEKLL 542 (952)
Q Consensus 511 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 542 (952)
|..+..+++|+.|+|++|++++..|..+..++
T Consensus 277 p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 277 PESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp CGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred CHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 77788888888888888888877777766655
No 315
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=6.3e-27 Score=256.45 Aligned_cols=205 Identities=20% Similarity=0.260 Sum_probs=182.4
Q ss_pred cCCCcccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCccCC------
Q 002214 347 GNLINLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGD------ 420 (952)
Q Consensus 347 ~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~------ 420 (952)
+.+++|++|+|++|.++ .+|..+..+++|++|+|++|.++ ..|..|..+++|++|+|++|++.+.+|..+..
T Consensus 101 ~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~ 178 (328)
T 4fcg_A 101 FRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGE 178 (328)
T ss_dssp GGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCC
T ss_pred hhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhh
Confidence 45678888999999988 77888888999999999999988 66888889999999999998888788877654
Q ss_pred ---CCCCcEEeccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCc
Q 002214 421 ---LNSLRILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQ 497 (952)
Q Consensus 421 ---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 497 (952)
+++|++|++++|+++ .+|..+..+++|+.|++++|++++ +|..+..+++|++|+|++|++.+.+|..|..+++|+
T Consensus 179 ~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~ 256 (328)
T 4fcg_A 179 HQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLK 256 (328)
T ss_dssp EEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCC
T ss_pred hccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCC
Confidence 999999999999998 567789999999999999999995 666799999999999999999999999999999999
Q ss_pred eEEccCccccCcccccccccccccEEeCCCCcccccCccchhcccccccccccccccc
Q 002214 498 HLSLEHNKLQGPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFNKLV 555 (952)
Q Consensus 498 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 555 (952)
.|+|++|++.+.+|..+..+++|+.|+|++|++.+.+|..+.++++|+.+++..|.+.
T Consensus 257 ~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 257 RLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp EEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred EEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 9999999998899999999999999999999999999999999999999999887664
No 316
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=9.4e-29 Score=270.18 Aligned_cols=125 Identities=21% Similarity=0.176 Sum_probs=101.2
Q ss_pred ccceEEcccCcccccCCccccCCCCCcEEEccCCcccccCCccccccCCccEEEeeCCcCCccCchhhhccCCCcEeeec
Q 002214 156 RLKGLYVSYNQFKGPIPNNLWHCKELSSVSLSYNQFTGRLPRDLGNSTKLKSLDLGFNNLNGEIPQEIGNLRNLEILGID 235 (952)
Q Consensus 156 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 235 (952)
+++.++++.+.+.......+..+++|+.|+|++|++++..|..|+.+++|++|+|++|.+++..+ +..+++|++|+++
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 46677888888876555666778899999999999998888899999999999999999986555 9999999999999
Q ss_pred cccccccCCccccCCCCccEEEeeCccccccCCCCcccCCCCCcceEEcccCcCCCC
Q 002214 236 QSNLVGFVPDTIFNISTLKILSLFNNTLSGNLPSSKNLIGLPNLEGLNLGLNNLSGS 292 (952)
Q Consensus 236 ~n~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~L~~L~L~~N~l~~~ 292 (952)
+|++.++. ..++|++|++++|++++..+. .+++|++|++++|++++.
T Consensus 89 ~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~-----~~~~L~~L~l~~N~l~~~ 135 (317)
T 3o53_A 89 NNYVQELL-----VGPSIETLHAANNNISRVSCS-----RGQGKKNIYLANNKITML 135 (317)
T ss_dssp SSEEEEEE-----ECTTCCEEECCSSCCSEEEEC-----CCSSCEEEECCSSCCCSG
T ss_pred CCcccccc-----CCCCcCEEECCCCccCCcCcc-----ccCCCCEEECCCCCCCCc
Confidence 99988764 348999999999999754322 245666666666666543
No 317
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=4.8e-28 Score=279.95 Aligned_cols=222 Identities=23% Similarity=0.187 Sum_probs=166.8
Q ss_pred CCCcccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCccCCCCCCcEE
Q 002214 348 NLINLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLRIL 427 (952)
Q Consensus 348 ~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 427 (952)
.+++|++|+|++|.+++..|..|..+++|++|+|++|.|++..| |..+++|++|+|++|.|++..+ .++|++|
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L 104 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETL 104 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEE
Confidence 44578888888888887777788888888888888888876554 7788888888888888874432 2778888
Q ss_pred eccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCccccc-CCCCCceEEccCccc
Q 002214 428 SLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTII-GLKNLQHLSLEHNKL 506 (952)
Q Consensus 428 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~L~~N~l 506 (952)
++++|+++++.+.. +++|+.|+|++|.+++..|..+..+++|+.|+|++|.+++..|..+. .+++|+.|+|++|.|
T Consensus 105 ~L~~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l 181 (487)
T 3oja_A 105 HAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFI 181 (487)
T ss_dssp ECCSSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCC
T ss_pred ECcCCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcc
Confidence 88888888766543 46788888888888877777788888888888888888877777775 678888888888888
Q ss_pred cCcccccccccccccEEeCCCCcccccCccchhcccccccccccccccccCCCCCCCcccccccccccCccCCCCC
Q 002214 507 QGPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFNKLVGEIPRGGAFANFSAESFIGNDLLCGSP 582 (952)
Q Consensus 507 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~p 582 (952)
++..+ +..+++|+.|+|++|.|++.+| .+..+++|+.|+|++|++++..+....+..+....+.+|++.|+++
T Consensus 182 ~~~~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~lp~~l~~l~~L~~L~l~~N~l~c~~~ 254 (487)
T 3oja_A 182 YDVKG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCGTL 254 (487)
T ss_dssp CEEEC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCBCHHHH
T ss_pred ccccc--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcccchhhccCCCCCEEEcCCCCCcCcch
Confidence 75532 3457888888888888886444 4778888888888888888644434455666677777888777654
No 318
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.95 E-value=6.7e-27 Score=249.24 Aligned_cols=217 Identities=28% Similarity=0.318 Sum_probs=160.6
Q ss_pred CCCCCCceEEEeCCCCeEEEEEecCCCCcccCCccccCCcccCeeeccccccccccCCCcCCcCCCcEEeCcCCcccccC
Q 002214 18 ASVCSWMGITCDVYGNRVTSLTISDLGLAGTIPSHLGNLSSLQTLVLSRNWFSGTIPKEIGNLTKLKELHLDYNKLQGEI 97 (952)
Q Consensus 18 ~~~c~w~~v~c~~~~~~~~~l~l~~~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~ 97 (952)
.++|.|+|+.|...+ +.+.+++++++++ .+|..+. ++|+.|+|++|.+++..+..|..+++|++|+|++|++....
T Consensus 2 ~~~C~~~~~~C~c~~-~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~ 77 (270)
T 2o6q_A 2 EALCKKDGGVCSCNN-NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLP 77 (270)
T ss_dssp CCCBGGGTCSBEEET-TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCC
T ss_pred CccCCCCCCCCEeCC-CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeC
Confidence 489999999998643 4578999999988 5777665 68899999999998666668888899999999999888555
Q ss_pred ChhhcCCCCCCeEeecCccCccccCcccccccccccceeeccccccccCCCCCCCCCCccceEEcccCcccccCCccccC
Q 002214 98 PEELGNLAELEMLVLNNNLLTGTIPASIFNLSFISTALDFSDNSLTGSFPYDMCPGLPRLKGLYVSYNQFKGPIPNNLWH 177 (952)
Q Consensus 98 p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~l~~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~ 177 (952)
+..|.++++|++|+|++|+++ .+|...+.++++|++|+|++|++++..+..|..
T Consensus 78 ~~~~~~l~~L~~L~l~~n~l~--------------------------~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 131 (270)
T 2o6q_A 78 AGIFKELKNLETLWVTDNKLQ--------------------------ALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDS 131 (270)
T ss_dssp TTTTSSCTTCCEEECCSSCCC--------------------------CCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTT
T ss_pred hhhhcCCCCCCEEECCCCcCC--------------------------cCCHhHcccccCCCEEECCCCccCeeCHHHhCc
Confidence 566788888888888888877 233334456677888888888877666666777
Q ss_pred CCCCcEEEccCCcccccCCccccccCCccEEEeeCCcCCccCchhhhccCCCcEeeeccccccccCCccccCCCCccEEE
Q 002214 178 CKELSSVSLSYNQFTGRLPRDLGNSTKLKSLDLGFNNLNGEIPQEIGNLRNLEILGIDQSNLVGFVPDTIFNISTLKILS 257 (952)
Q Consensus 178 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~ 257 (952)
+++|+.|+|++|++++..+..|+.+++|++|+|++|++++..+..|..+++|+.|+|++|++.++.+..+..+++|+.|+
T Consensus 132 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 211 (270)
T 2o6q_A 132 LTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQ 211 (270)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEE
T ss_pred CcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEE
Confidence 77777777777777766666677777777777777777765555666777777777777666666555566666666666
Q ss_pred eeCcccc
Q 002214 258 LFNNTLS 264 (952)
Q Consensus 258 Ls~N~l~ 264 (952)
|++|.+.
T Consensus 212 l~~N~~~ 218 (270)
T 2o6q_A 212 LQENPWD 218 (270)
T ss_dssp CCSSCBC
T ss_pred ecCCCee
Confidence 6666554
No 319
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.94 E-value=1.1e-28 Score=268.84 Aligned_cols=249 Identities=21% Similarity=0.178 Sum_probs=149.0
Q ss_pred ccCCCCCCCCCceEEEeCCCCeEEEEEecCCCCcccCCccccCCcccCeeeccccccc-cccCCCcC-------CcCCCc
Q 002214 13 NWTSNASVCSWMGITCDVYGNRVTSLTISDLGLAGTIPSHLGNLSSLQTLVLSRNWFS-GTIPKEIG-------NLTKLK 84 (952)
Q Consensus 13 ~~~~~~~~c~w~~v~c~~~~~~~~~l~l~~~~~~~~~p~~l~~l~~L~~L~L~~n~l~-~~~p~~l~-------~l~~L~ 84 (952)
+|....+|+.|..+.......+++.|+++++.+ .+|..+... |+.|+|++|.++ ..+|..+. .+++|+
T Consensus 23 ~~~~~~~c~~~~~~~~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~ 98 (312)
T 1wwl_A 23 DWSSAFNCLGAADVELYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQ 98 (312)
T ss_dssp CGGGGGGSSSCSEEEEEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCC
T ss_pred chHHHhhhhccccEEEEccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCcc
Confidence 455445666666665544445667777777777 566666554 777777777773 34555554 577777
Q ss_pred EEeCcCCcccccCChhh--cCCCCCCeEeecCccCccccCcccccccccccceeeccccccccCCCCCCCCCCccceEEc
Q 002214 85 ELHLDYNKLQGEIPEEL--GNLAELEMLVLNNNLLTGTIPASIFNLSFISTALDFSDNSLTGSFPYDMCPGLPRLKGLYV 162 (952)
Q Consensus 85 ~L~L~~n~l~~~~p~~l--~~l~~L~~L~L~~n~l~~~~p~~~~~l~~l~~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L 162 (952)
+|+|++|++.+.+|..+ +.+++|++|+|++|++++. |..+..+... .+++|++|+|
T Consensus 99 ~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~---------------------~~~~L~~L~L 156 (312)
T 1wwl_A 99 ELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQW---------------------LKPGLKVLSI 156 (312)
T ss_dssp EEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTT---------------------CCTTCCEEEE
T ss_pred EEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHh---------------------hcCCCcEEEe
Confidence 77777777776677665 7777777777777777744 6555544200 1246666666
Q ss_pred ccCcccccCCccccCCCCCcEEEccCCccccc--CCccc--cccCCccEEEeeCCcCCc---cCchhhhccCCCcEeeec
Q 002214 163 SYNQFKGPIPNNLWHCKELSSVSLSYNQFTGR--LPRDL--GNSTKLKSLDLGFNNLNG---EIPQEIGNLRNLEILGID 235 (952)
Q Consensus 163 ~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~--~~~~~--~~l~~L~~L~L~~N~l~~---~~p~~~~~l~~L~~L~L~ 235 (952)
++|++++..|..|..+++|+.|+|++|++.+. .|..+ +.+++|++|+|++|++++ .....+..+++|+.|+++
T Consensus 157 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls 236 (312)
T 1wwl_A 157 AQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLS 236 (312)
T ss_dssp ESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECT
T ss_pred eCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECC
Confidence 66666655556666666666666666665433 12222 556666666666666652 112233455666666666
Q ss_pred cccccccCC-ccccCCCCccEEEeeCccccccCCCCcccCCCCCcceEEcccCcCCCC
Q 002214 236 QSNLVGFVP-DTIFNISTLKILSLFNNTLSGNLPSSKNLIGLPNLEGLNLGLNNLSGS 292 (952)
Q Consensus 236 ~n~~~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~L~~L~L~~N~l~~~ 292 (952)
+|++.+..| ..+..+++|++|+|++|+|+ .+|.. +. ++|++|+|++|++++.
T Consensus 237 ~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~--~~--~~L~~L~Ls~N~l~~~ 289 (312)
T 1wwl_A 237 HNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKG--LP--AKLSVLDLSYNRLDRN 289 (312)
T ss_dssp TSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSS--CC--SEEEEEECCSSCCCSC
T ss_pred CCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhh--cc--CCceEEECCCCCCCCC
Confidence 666666553 34445666666666666665 33332 11 5666666666666654
No 320
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.94 E-value=5.2e-28 Score=263.65 Aligned_cols=85 Identities=25% Similarity=0.302 Sum_probs=51.3
Q ss_pred hcccccceeecCCcccCCCCc-ccccCCCCCceEEccCccccCcccccccccccccEEeCCCCcccccCccchhcccccc
Q 002214 467 ENLKAVVDIYLSRNNLSGNIP-STIIGLKNLQHLSLEHNKLQGPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLK 545 (952)
Q Consensus 467 ~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 545 (952)
..+++|++|+|++|++++..| ..+..+++|++|+|++|+|+ .+|..+. ++|+.|||++|+|++. |. +..+++|+
T Consensus 225 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~ 299 (312)
T 1wwl_A 225 AARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVG 299 (312)
T ss_dssp HTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEE
T ss_pred hcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCC
Confidence 344555666666666655443 34455666666666666666 4454444 6666666666666654 44 66666667
Q ss_pred ccccccccccc
Q 002214 546 SLNLSFNKLVG 556 (952)
Q Consensus 546 ~L~l~~N~l~~ 556 (952)
+|++++|++++
T Consensus 300 ~L~L~~N~l~~ 310 (312)
T 1wwl_A 300 NLSLKGNPFLD 310 (312)
T ss_dssp EEECTTCTTTC
T ss_pred EEeccCCCCCC
Confidence 77777776654
No 321
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.94 E-value=3.8e-30 Score=307.96 Aligned_cols=450 Identities=16% Similarity=0.108 Sum_probs=231.8
Q ss_pred CCCCceEEEeCCCCeEEEEEecCCCCcccCCccccCCcccCeeecccccccc---ccCCC------------cCCcCCCc
Q 002214 20 VCSWMGITCDVYGNRVTSLTISDLGLAGTIPSHLGNLSSLQTLVLSRNWFSG---TIPKE------------IGNLTKLK 84 (952)
Q Consensus 20 ~c~w~~v~c~~~~~~~~~l~l~~~~~~~~~p~~l~~l~~L~~L~L~~n~l~~---~~p~~------------l~~l~~L~ 84 (952)
|++|.++.. .....++++++... ..+..+..+++|+.|++++|.... ..|.. ...+++|+
T Consensus 34 ck~W~~~~~----~~~~~l~~~~~~~~-~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~ 108 (594)
T 2p1m_B 34 CKSWYEIER----WCRRKVFIGNCYAV-SPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLE 108 (594)
T ss_dssp CHHHHHHHH----HHCCEEEESSTTSS-CHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCC
T ss_pred HHHHHHhhh----hhceEEeecccccc-CHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCC
Confidence 557888821 12346677665543 223456788999999999975321 22222 23567888
Q ss_pred EEeCcCCcccccCChhhc-CCCCCCeEeecCc-cCccc-cCcccccccccccceeeccccccccCCCCCCCCCCccceEE
Q 002214 85 ELHLDYNKLQGEIPEELG-NLAELEMLVLNNN-LLTGT-IPASIFNLSFISTALDFSDNSLTGSFPYDMCPGLPRLKGLY 161 (952)
Q Consensus 85 ~L~L~~n~l~~~~p~~l~-~l~~L~~L~L~~n-~l~~~-~p~~~~~l~~l~~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ 161 (952)
+|+|++|.+.+..+..+. .+++|++|+|++| .++.. ++..+. .+++|++|+
T Consensus 109 ~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~--------------------------~~~~L~~L~ 162 (594)
T 2p1m_B 109 EIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAA--------------------------TCRNLKELD 162 (594)
T ss_dssp EEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHH--------------------------HCTTCCEEE
T ss_pred eEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHH--------------------------hCCCCCEEe
Confidence 888888888766666665 6788888888887 44421 222111 245666666
Q ss_pred cccCcccccCCcccc----CCCCCcEEEccCCc--ccc-cCCccccccCCccEEEeeCCcCCccCchhhhccCCCcEeee
Q 002214 162 VSYNQFKGPIPNNLW----HCKELSSVSLSYNQ--FTG-RLPRDLGNSTKLKSLDLGFNNLNGEIPQEIGNLRNLEILGI 234 (952)
Q Consensus 162 L~~n~l~~~~~~~l~----~l~~L~~L~L~~N~--l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 234 (952)
|++|.+++..+..+. .+++|+.|++++|. ++. .++..+..+++|++|+|++|...+.+|..+..+++|+.|++
T Consensus 163 L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l 242 (594)
T 2p1m_B 163 LRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGT 242 (594)
T ss_dssp CTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEEC
T ss_pred CcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEccc
Confidence 666665543333222 44566666666665 210 11111233466666666666222235556666666666664
Q ss_pred cccc-------ccccCCccccCCCCccEE-EeeCccccccCCCCcccCCCCCcceEEcccCcCCCCCCcccccchhhhhh
Q 002214 235 DQSN-------LVGFVPDTIFNISTLKIL-SLFNNTLSGNLPSSKNLIGLPNLEGLNLGLNNLSGSIPSFFFNASKLYAL 306 (952)
Q Consensus 235 ~~n~-------~~~~~~~~~~~l~~L~~L-~Ls~N~l~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l 306 (952)
+.+. +.+ ++..+.++++|+.| .+.+.... .++. .+..+++|++|++++|.+++.....
T Consensus 243 ~~~~~~~~~~~~~~-l~~~l~~~~~L~~Ls~~~~~~~~-~l~~--~~~~~~~L~~L~L~~~~l~~~~l~~---------- 308 (594)
T 2p1m_B 243 GGYTAEVRPDVYSG-LSVALSGCKELRCLSGFWDAVPA-YLPA--VYSVCSRLTTLNLSYATVQSYDLVK---------- 308 (594)
T ss_dssp SBCCCCCCHHHHHH-HHHHHHTCTTCCEEECCBTCCGG-GGGG--GHHHHTTCCEEECTTCCCCHHHHHH----------
T ss_pred ccccCccchhhHHH-HHHHHhcCCCcccccCCcccchh-hHHH--HHHhhCCCCEEEccCCCCCHHHHHH----------
Confidence 4332 222 12244555555555 22222111 1111 0113455555565555543211000
Q ss_pred hccccCccccccccCcceeechhhHHHHHHHhhccccccccCCCcccEEEccCCCCCCC-CCcccccCCCCcEEEcc---
Q 002214 307 ELGYNSNLKRLGLERNYLTFSTSELMSLFSALVNCKSLKIGNLINLTTLSLGDNNLSGS-LPITLGRLKKLQGLDLQ--- 382 (952)
Q Consensus 307 ~l~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~l~~l~~L~~L~L~--- 382 (952)
.+..+++|++|++++| ++.. ++.....+++|++|+++
T Consensus 309 --------------------------------------~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~ 349 (594)
T 2p1m_B 309 --------------------------------------LLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSE 349 (594)
T ss_dssp --------------------------------------HHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSC
T ss_pred --------------------------------------HHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCc
Confidence 0123334444444444 2211 11111224444444442
Q ss_pred ------CccccCCCCcccc-CCCcceEEEeccccccccCCCccC-CCCCCcEEecc--c----cccCCcCC-----cccc
Q 002214 383 ------NNKFEGPIPQEFC-HFSRLYVVYLNRNKLSGSIPSCLG-DLNSLRILSLS--S----NELTSVIP-----STFW 443 (952)
Q Consensus 383 ------~N~i~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~L~--~----N~l~~~~~-----~~~~ 443 (952)
.+.+++.....+. .+++|+.|.++.|.+++.....+. .+++|+.|+++ + |.+++... ..+.
T Consensus 350 ~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~ 429 (594)
T 2p1m_B 350 PFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVE 429 (594)
T ss_dssp TTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHH
T ss_pred ccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHh
Confidence 2223221111121 245555555555555433333332 35566666666 2 44442211 1245
Q ss_pred CCCCCceeEecCCccCCCCchhhhc-ccccceeecCCcccCCCCcccc-cCCCCCceEEccCccccCcccc-cccccccc
Q 002214 444 NLEDILGFDFSSNSLNGSLPLEIEN-LKAVVDIYLSRNNLSGNIPSTI-IGLKNLQHLSLEHNKLQGPIPE-SFGELVSL 520 (952)
Q Consensus 444 ~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L 520 (952)
.+++|+.|++++ .+++..+..+.. +++|+.|+|++|.+++.....+ .++++|+.|+|++|++++.... ....+++|
T Consensus 430 ~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L 508 (594)
T 2p1m_B 430 HCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETM 508 (594)
T ss_dssp HCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGS
T ss_pred hCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCC
Confidence 566777777766 555444444444 6778888888887765444444 5578888888888888643333 34457888
Q ss_pred cEEeCCCCcccccCccch-hccccccccccccccc
Q 002214 521 EFLDLSNNDLSGVIPASL-EKLLYLKSLNLSFNKL 554 (952)
Q Consensus 521 ~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~l~~N~l 554 (952)
+.|++++|+++......+ ..+++|+...+..+.-
T Consensus 509 ~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~~ 543 (594)
T 2p1m_B 509 RSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGA 543 (594)
T ss_dssp SEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSSC
T ss_pred CEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCCc
Confidence 888888888753333333 4566666655555543
No 322
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=2.2e-28 Score=286.46 Aligned_cols=185 Identities=19% Similarity=0.127 Sum_probs=131.2
Q ss_pred ecCccceEEEEEEe-CCCcEEEEEEeeccC----------chhhHHHHHHHHHHHhC-CCCccceeeeEeecCCeeEEEE
Q 002214 672 IGIGSYGSVYKGRF-PDGIEVAIKVFHLQR----------EGALNSFDAECEILKTI-RHRNLVKIISSCTNHNFKALVL 739 (952)
Q Consensus 672 lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 739 (952)
.+.|++|.+..++. -.|+.||||++.... +...++|.+|+++|+++ .|+||+++++++++++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 45666665555432 358899999986442 12345799999999999 7999999999999999999999
Q ss_pred EccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcCc
Q 002214 740 EYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEEDS 819 (952)
Q Consensus 740 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 819 (952)
||++|++|.+.+...+ .++.. .|+.||+.||+|+ |++|||||||||+|||++++|.+||+|||+|+......
T Consensus 322 Eyv~G~~L~d~i~~~~-~l~~~---~I~~QIl~AL~yl---H~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~- 393 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGE-EIDRE---KILGSLLRSLAAL---EKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC- 393 (569)
T ss_dssp ECCCSEEHHHHHHTTC-CCCHH---HHHHHHHHHHHHH---HHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC----
T ss_pred ecCCCCcHHHHHHhCC-CCCHH---HHHHHHHHHHHHH---HHCCceeccCchHhEEECCCCCEEEeecccCeeCCCCC-
Confidence 9999999999997654 56654 5899999999999 79999999999999999999999999999998765432
Q ss_pred ccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCC
Q 002214 820 MKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPT 865 (952)
Q Consensus 820 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~ 865 (952)
......+||+.|+|||++.+ .+..++|+||+|++.+++.++..|+
T Consensus 394 ~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 394 SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp CCSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred ccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 22344679999999999875 4667899999999999887765553
No 323
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=3.4e-26 Score=244.88 Aligned_cols=212 Identities=22% Similarity=0.239 Sum_probs=195.0
Q ss_pred CcccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCccCCCCCCcEEec
Q 002214 350 INLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLRILSL 429 (952)
Q Consensus 350 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 429 (952)
++|++|++++|++++..+..|..+++|++|++++|.+++..+..|.++++|++|+|++|++++..+..|.++++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 47999999999999888889999999999999999999888889999999999999999999888899999999999999
Q ss_pred cccccCCcCCccccCCCCCceeEecCCccCCC-CchhhhcccccceeecCCcccCCCCcccccCCCCCc----eEEccCc
Q 002214 430 SSNELTSVIPSTFWNLEDILGFDFSSNSLNGS-LPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQ----HLSLEHN 504 (952)
Q Consensus 430 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~----~L~L~~N 504 (952)
++|++++..+..|..+++|+.|++++|++++. +|..+..+++|++|+|++|++++..+..|..+++|+ .|++++|
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n 187 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSS
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCC
Confidence 99999998888899999999999999999874 589999999999999999999988888888888887 8999999
Q ss_pred cccCcccccccccccccEEeCCCCcccccCccchhcccccccccccccccccCCCCCC
Q 002214 505 KLQGPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFNKLVGEIPRGG 562 (952)
Q Consensus 505 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~ 562 (952)
++++..+..+.. .+|+.|+|++|+|++..+..|..+++|+.|++++|+|+|.+|...
T Consensus 188 ~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~l~ 244 (276)
T 2z62_A 188 PMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRID 244 (276)
T ss_dssp CCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTTTH
T ss_pred cccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCchH
Confidence 999766655554 589999999999998878888999999999999999999998643
No 324
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=1e-25 Score=240.00 Aligned_cols=208 Identities=25% Similarity=0.331 Sum_probs=190.1
Q ss_pred CcccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCccCCCCCCcEEec
Q 002214 350 INLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLRILSL 429 (952)
Q Consensus 350 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 429 (952)
.+.+.+++++++++. +|..+. ++|++|++++|.|++..+..|.++++|++|+|++|++++..+..|..+++|++|++
T Consensus 16 ~~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l 92 (270)
T 2o6q_A 16 NNKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWV 92 (270)
T ss_dssp TTTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEEC
T ss_pred CCCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEEC
Confidence 357899999999994 555443 68999999999999888889999999999999999999777777899999999999
Q ss_pred cccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEccCccccCc
Q 002214 430 SSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNKLQGP 509 (952)
Q Consensus 430 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 509 (952)
++|+++++.+..|..+++|+.|++++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|++++.
T Consensus 93 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 172 (270)
T 2o6q_A 93 TDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRV 172 (270)
T ss_dssp CSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEe
Confidence 99999998888999999999999999999988888899999999999999999988778899999999999999999988
Q ss_pred ccccccccccccEEeCCCCcccccCccchhcccccccccccccccccCCCC
Q 002214 510 IPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFNKLVGEIPR 560 (952)
Q Consensus 510 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~ 560 (952)
.+..|..+++|+.|+|++|+|++..+..|..+++|+.|++++|+|.|.++.
T Consensus 173 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 223 (270)
T 2o6q_A 173 PEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCNG 223 (270)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSSS
T ss_pred ChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCcc
Confidence 788899999999999999999988888899999999999999999998864
No 325
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=1.9e-26 Score=266.65 Aligned_cols=170 Identities=22% Similarity=0.173 Sum_probs=106.0
Q ss_pred cccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCccC-CCCCCcEEec
Q 002214 351 NLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLG-DLNSLRILSL 429 (952)
Q Consensus 351 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~L 429 (952)
+|++|++++|.+++..+. .+++|+.|+|++|.|++..|..|..+++|+.|+|++|.+++..|..+. .+++|++|+|
T Consensus 100 ~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~L 176 (487)
T 3oja_A 100 SIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNL 176 (487)
T ss_dssp TCCEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEEC
T ss_pred CcCEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEec
Confidence 455555555555543332 234555555555555555455555555555555555555544444443 4555555555
Q ss_pred cccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEccCccccCc
Q 002214 430 SSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNKLQGP 509 (952)
Q Consensus 430 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 509 (952)
++|.|++..+ +..+++|+.|+|++|+|++.+| .|..+++|+.|+|++|+|++
T Consensus 177 s~N~l~~~~~--------------------------~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~- 228 (487)
T 3oja_A 177 QYNFIYDVKG--------------------------QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL- 228 (487)
T ss_dssp TTSCCCEEEC--------------------------CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-
T ss_pred CCCccccccc--------------------------cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-
Confidence 5555554321 1235566666666666665444 37777888888888888884
Q ss_pred ccccccccccccEEeCCCCccc-ccCccchhcccccccccccc
Q 002214 510 IPESFGELVSLEFLDLSNNDLS-GVIPASLEKLLYLKSLNLSF 551 (952)
Q Consensus 510 ~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~l~~ 551 (952)
+|..+..+++|+.|++++|++. +.+|..+..++.|+.++++.
T Consensus 229 lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~~ 271 (487)
T 3oja_A 229 IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQT 271 (487)
T ss_dssp ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHHH
T ss_pred cchhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEeccc
Confidence 6777888888999999999887 56778888888999888873
No 326
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.93 E-value=4.2e-25 Score=237.26 Aligned_cols=207 Identities=25% Similarity=0.255 Sum_probs=185.5
Q ss_pred ccCCCcccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCccCCCCCCc
Q 002214 346 IGNLINLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLR 425 (952)
Q Consensus 346 ~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 425 (952)
++.+++++++++++|.++. +|..+. ++++.|+|++|.|++..+..|..+++|+.|+|++|.|++..+. ..+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCC
T ss_pred ccccCCccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCC
Confidence 5788899999999999995 444443 6899999999999988899999999999999999999965443 7899999
Q ss_pred EEeccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEccCcc
Q 002214 426 ILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNK 505 (952)
Q Consensus 426 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 505 (952)
+|++++|+++. +|..+..+++|+.|++++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+
T Consensus 81 ~L~Ls~N~l~~-l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 81 TLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp EEECCSSCCSS-CCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcCCc-CchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 99999999984 56788999999999999999998888899999999999999999998888889999999999999999
Q ss_pred ccCcccccccccccccEEeCCCCcccccCccchhcccccccccccccccccCCC
Q 002214 506 LQGPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFNKLVGEIP 559 (952)
Q Consensus 506 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 559 (952)
|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|.|.+.
T Consensus 160 l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~c~ 212 (290)
T 1p9a_G 160 LTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNCE 212 (290)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSGG
T ss_pred CCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCcCc
Confidence 99777778899999999999999998 677778888899999999999998763
No 327
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=6.2e-25 Score=235.00 Aligned_cols=225 Identities=24% Similarity=0.283 Sum_probs=199.1
Q ss_pred EEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCccCCCCCCcEEeccccc
Q 002214 354 TLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLRILSLSSNE 433 (952)
Q Consensus 354 ~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 433 (952)
.++..+..++ .+|..+. ++|++|++++|.|++..+..|.++++|++|++++|++++..+..|..+++|++|++++|+
T Consensus 11 ~~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 87 (276)
T 2z62_A 11 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87 (276)
T ss_dssp EEECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred eEEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCc
Confidence 4666777777 4555443 589999999999998888899999999999999999998888899999999999999999
Q ss_pred cCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCC-CcccccCCCCCceEEccCccccCcccc
Q 002214 434 LTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGN-IPSTIIGLKNLQHLSLEHNKLQGPIPE 512 (952)
Q Consensus 434 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~ 512 (952)
+++..+..|..+++|+.|++++|++++..+..+..+++|++|++++|++++. +|..|..+++|++|+|++|++++..+.
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~ 167 (276)
T 2z62_A 88 IQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 167 (276)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGG
T ss_pred cCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHH
Confidence 9999999999999999999999999987777899999999999999999975 589999999999999999999988888
Q ss_pred ccccccccc----EEeCCCCcccccCccchhcccccccccccccccccCCCCC-CCcccccccccccCccCCCCC
Q 002214 513 SFGELVSLE----FLDLSNNDLSGVIPASLEKLLYLKSLNLSFNKLVGEIPRG-GAFANFSAESFIGNDLLCGSP 582 (952)
Q Consensus 513 ~~~~l~~L~----~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~~~~~~~~~~n~~~c~~p 582 (952)
.|..+++|+ .|++++|++++..+..+.. .+|+.|++++|++++..+.. ..+.++....+.+|++.|+||
T Consensus 168 ~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 168 DLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp GGHHHHTCTTCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred HhhhhhhccccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 888888888 9999999999766665554 58999999999999765543 456777788899999999997
No 328
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.92 E-value=2.1e-28 Score=292.71 Aligned_cols=422 Identities=14% Similarity=0.097 Sum_probs=267.7
Q ss_pred CeEEEEEecCCCCccc---CC------------ccccCCcccCeeeccccccccccCCCcC-CcCCCcEEeCcCC-cccc
Q 002214 33 NRVTSLTISDLGLAGT---IP------------SHLGNLSSLQTLVLSRNWFSGTIPKEIG-NLTKLKELHLDYN-KLQG 95 (952)
Q Consensus 33 ~~~~~l~l~~~~~~~~---~p------------~~l~~l~~L~~L~L~~n~l~~~~p~~l~-~l~~L~~L~L~~n-~l~~ 95 (952)
++++.|+++++..... .| .....+++|+.|+|++|.+++..+..+. .+++|++|+|++| .+..
T Consensus 66 ~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~ 145 (594)
T 2p1m_B 66 PKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFST 145 (594)
T ss_dssp TTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEH
T ss_pred CCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCH
Confidence 4689999999764321 22 1235788999999999999987777776 6899999999999 5553
Q ss_pred c-CChhhcCCCCCCeEeecCccCccccCcccccccccccceeeccccccccCCCCCCCCCCccceEEcccCc--ccc-cC
Q 002214 96 E-IPEELGNLAELEMLVLNNNLLTGTIPASIFNLSFISTALDFSDNSLTGSFPYDMCPGLPRLKGLYVSYNQ--FKG-PI 171 (952)
Q Consensus 96 ~-~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~l~~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~--l~~-~~ 171 (952)
. ++..+.++++|++|+|++|.+++..+..+.. +...+++|++|++++|. +.. .+
T Consensus 146 ~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~----------------------~~~~~~~L~~L~l~~~~~~~~~~~l 203 (594)
T 2p1m_B 146 DGLAAIAATCRNLKELDLRESDVDDVSGHWLSH----------------------FPDTYTSLVSLNISCLASEVSFSAL 203 (594)
T ss_dssp HHHHHHHHHCTTCCEEECTTCEEECCCGGGGGG----------------------SCTTCCCCCEEECTTCCSCCCHHHH
T ss_pred HHHHHHHHhCCCCCEEeCcCCccCCcchHHHHH----------------------HhhcCCcCcEEEecccCCcCCHHHH
Confidence 2 5555668999999999999987544443332 22356789999999887 221 11
Q ss_pred CccccCCCCCcEEEccCC-cccccCCccccccCCccEEEeeCCc-------CCccCchhhhccCCCcEe-eecccccccc
Q 002214 172 PNNLWHCKELSSVSLSYN-QFTGRLPRDLGNSTKLKSLDLGFNN-------LNGEIPQEIGNLRNLEIL-GIDQSNLVGF 242 (952)
Q Consensus 172 ~~~l~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~L~~N~-------l~~~~p~~~~~l~~L~~L-~L~~n~~~~~ 242 (952)
+..+..+++|+.|+|++| .+++ ++..+..+++|++|+++.+. +. .++..+.++++|+.| .+.+.. ...
T Consensus 204 ~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~-~l~~~l~~~~~L~~Ls~~~~~~-~~~ 280 (594)
T 2p1m_B 204 ERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYS-GLSVALSGCKELRCLSGFWDAV-PAY 280 (594)
T ss_dssp HHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHH-HHHHHHHTCTTCCEEECCBTCC-GGG
T ss_pred HHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHH-HHHHHHhcCCCcccccCCcccc-hhh
Confidence 122345689999999998 5554 77788889999999966553 33 345578899999998 444322 233
Q ss_pred CCccccCCCCccEEEeeCccccccCCCCcccCCCCCcceEEcccCcCCCCCCcccccchhhhhhhccccCccccccccCc
Q 002214 243 VPDTIFNISTLKILSLFNNTLSGNLPSSKNLIGLPNLEGLNLGLNNLSGSIPSFFFNASKLYALELGYNSNLKRLGLERN 322 (952)
Q Consensus 243 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l~l~~~~~L~~L~L~~n 322 (952)
++..+..+++|+.|+|++|.+++... ...+..+++|++|++++| ++......+
T Consensus 281 l~~~~~~~~~L~~L~L~~~~l~~~~l-~~~~~~~~~L~~L~l~~~-~~~~~l~~l------------------------- 333 (594)
T 2p1m_B 281 LPAVYSVCSRLTTLNLSYATVQSYDL-VKLLCQCPKLQRLWVLDY-IEDAGLEVL------------------------- 333 (594)
T ss_dssp GGGGHHHHTTCCEEECTTCCCCHHHH-HHHHTTCTTCCEEEEEGG-GHHHHHHHH-------------------------
T ss_pred HHHHHHhhCCCCEEEccCCCCCHHHH-HHHHhcCCCcCEEeCcCc-cCHHHHHHH-------------------------
Confidence 45555578899999999998753211 112456789999999887 431100000
Q ss_pred ceeechhhHHHHHHHhhccccccccCCCcccEEEcc---------CCCCCCCCCccc-ccCCCCcEEEccCccccCCCCc
Q 002214 323 YLTFSTSELMSLFSALVNCKSLKIGNLINLTTLSLG---------DNNLSGSLPITL-GRLKKLQGLDLQNNKFEGPIPQ 392 (952)
Q Consensus 323 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~---------~n~l~~~~~~~l-~~l~~L~~L~L~~N~i~~~~~~ 392 (952)
...+++|++|++. .+.+++.....+ ..+++|+.|+++.|.+++....
T Consensus 334 -----------------------~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~ 390 (594)
T 2p1m_B 334 -----------------------ASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALI 390 (594)
T ss_dssp -----------------------HHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHH
T ss_pred -----------------------HHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHH
Confidence 0123344444442 223332111112 1245555555555555433333
Q ss_pred ccc-CCCcceEEEec--c----ccccc-----cCCCccCCCCCCcEEeccccccCCcCCccccC-CCCCceeEecCCccC
Q 002214 393 EFC-HFSRLYVVYLN--R----NKLSG-----SIPSCLGDLNSLRILSLSSNELTSVIPSTFWN-LEDILGFDFSSNSLN 459 (952)
Q Consensus 393 ~~~-~l~~L~~L~L~--~----N~l~~-----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-l~~L~~L~Ls~N~l~ 459 (952)
.+. .+++|+.|+++ + |.++. .++..+..+++|+.|++++ .+++.....+.. +++|+.|+|++|.++
T Consensus 391 ~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~ 469 (594)
T 2p1m_B 391 TIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDS 469 (594)
T ss_dssp HHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSS
T ss_pred HHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCc
Confidence 332 34555555555 2 33331 1112245667888888866 565544444444 778888888888876
Q ss_pred CCCchhh-hcccccceeecCCcccCCCCcc-cccCCCCCceEEccCccccCcccccc-cccccccEEeCCCCcc
Q 002214 460 GSLPLEI-ENLKAVVDIYLSRNNLSGNIPS-TIIGLKNLQHLSLEHNKLQGPIPESF-GELVSLEFLDLSNNDL 530 (952)
Q Consensus 460 ~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l 530 (952)
+..+..+ ..+++|+.|+|++|.+++.... ....+++|+.|++++|+++......+ ..+++|+...+..+.-
T Consensus 470 ~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~~ 543 (594)
T 2p1m_B 470 DLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGA 543 (594)
T ss_dssp HHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSSC
T ss_pred HHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCCc
Confidence 5444444 6688899999999988643333 34458899999999998864433444 5568887777776643
No 329
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=1.9e-24 Score=232.14 Aligned_cols=209 Identities=25% Similarity=0.230 Sum_probs=185.9
Q ss_pred ccccCCCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCccCCCCCCcEEeccccccCCcCCccccCCCCC
Q 002214 369 TLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLRILSLSSNELTSVIPSTFWNLEDI 448 (952)
Q Consensus 369 ~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 448 (952)
.+..+++++++++++|.++.+ |..+. ++++.|+|++|++++..+..|..+++|++|+|++|+|+++.+. ..+++|
T Consensus 5 ~~~~l~~l~~l~~~~~~l~~i-p~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L 79 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLTAL-PPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVL 79 (290)
T ss_dssp EEECSTTCCEEECTTSCCSSC-CSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTC
T ss_pred cccccCCccEEECCCCCCCcC-CCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcC
Confidence 477889999999999999854 44443 6899999999999988889999999999999999999977554 789999
Q ss_pred ceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEccCccccCcccccccccccccEEeCCCC
Q 002214 449 LGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNKLQGPIPESFGELVSLEFLDLSNN 528 (952)
Q Consensus 449 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 528 (952)
+.|++++|+++ .+|..+..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 80 ~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 158 (290)
T 1p9a_G 80 GTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158 (290)
T ss_dssp CEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred CEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCC
Confidence 99999999999 67888999999999999999999888899999999999999999999888888999999999999999
Q ss_pred cccccCccchhcccccccccccccccccCCCCCCCcccccccccccCccCCCCCc
Q 002214 529 DLSGVIPASLEKLLYLKSLNLSFNKLVGEIPRGGAFANFSAESFIGNDLLCGSPY 583 (952)
Q Consensus 529 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~p~ 583 (952)
+|++..+..|..+++|+.|+|++|+++...+.......+....+.+|||.|+|..
T Consensus 159 ~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~c~~ 213 (290)
T 1p9a_G 159 NLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCNCEI 213 (290)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCSGGG
T ss_pred cCCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCcCcc
Confidence 9998777888999999999999999995443344445677778899999998864
No 330
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=3.2e-24 Score=228.63 Aligned_cols=205 Identities=20% Similarity=0.253 Sum_probs=186.6
Q ss_pred ccCCCcccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCccCCCCCCc
Q 002214 346 IGNLINLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLR 425 (952)
Q Consensus 346 ~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 425 (952)
...+++|+.|++++|.++.. ..+..+++|++|++++|.+++. ..+..+++|++|+|++|.+++..+..|..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 112 (272)
T 3rfs_A 37 QNELNSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLK 112 (272)
T ss_dssp HHHHTTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred cccccceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCC
Confidence 45678999999999999843 3588999999999999999863 4789999999999999999988888899999999
Q ss_pred EEeccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEccCcc
Q 002214 426 ILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNK 505 (952)
Q Consensus 426 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 505 (952)
+|++++|+++++.+..|..+++|+.|++++|++++..+..|..+++|+.|++++|++++..+..|..+++|++|+|++|+
T Consensus 113 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 192 (272)
T 3rfs_A 113 ELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQ 192 (272)
T ss_dssp EEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCc
Confidence 99999999999989899999999999999999998888888999999999999999998888889999999999999999
Q ss_pred ccCcccccccccccccEEeCCCCcccccCccchhcccccccccccccccccCCCCC
Q 002214 506 LQGPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFNKLVGEIPRG 561 (952)
Q Consensus 506 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~ 561 (952)
+++..+..|..+++|+.|+|++|++.+. +++|+.|++..|.++|.+|..
T Consensus 193 l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~ 241 (272)
T 3rfs_A 193 LKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNS 241 (272)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCT
T ss_pred CCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCc
Confidence 9988888899999999999999998754 457899999999999999963
No 331
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.91 E-value=2.1e-25 Score=259.78 Aligned_cols=185 Identities=18% Similarity=0.189 Sum_probs=146.6
Q ss_pred CccceecCccceEEEEEEeCCCcEEEEEEeeccCc--------hhhHHHHHHHHHHHhCCCCccceeeeEeecCCeeEEE
Q 002214 667 SEENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQRE--------GALNSFDAECEILKTIRHRNLVKIISSCTNHNFKALV 738 (952)
Q Consensus 667 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 738 (952)
...+.||+|+||+||+|.. .++.+|+|+...... ...+++.+|++++++++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 4467899999999999965 678899998643321 1235589999999999999999666666677778999
Q ss_pred EEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcC
Q 002214 739 LEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEED 818 (952)
Q Consensus 739 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 818 (952)
|||+++++|.+++.. +..++.|+++||+|| |+++|+||||||+|||++. .+||+|||+|+......
T Consensus 418 mE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~L---H~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~ 483 (540)
T 3en9_A 418 MSYINGKLAKDVIED---------NLDIAYKIGEIVGKL---HKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDE 483 (540)
T ss_dssp EECCCSEEHHHHSTT---------CTHHHHHHHHHHHHH---HHTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHH
T ss_pred EECCCCCCHHHHHHH---------HHHHHHHHHHHHHHH---HHCcCccCCCCHHHEEECC--eEEEEECccCEECCCcc
Confidence 999999999998875 568999999999999 7899999999999999999 99999999999875533
Q ss_pred ccc------ccccccccccccccccCc--CCcCcccchHhHHHHHHHHHhCCCCCC
Q 002214 819 SMK------QTQTLATIGYIAPEYGRE--GQVSIKGDVYNYGIMLMEVFTGMKPTN 866 (952)
Q Consensus 819 ~~~------~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~tg~~p~~ 866 (952)
... .....||+.|+|||++.. ..|+..+|+|+.++-..+-+.++.+|.
T Consensus 484 ~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 484 DKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 221 124579999999999876 567888999999999999888877763
No 332
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.91 E-value=6.4e-24 Score=231.12 Aligned_cols=203 Identities=19% Similarity=0.202 Sum_probs=175.5
Q ss_pred CCCcccEEEccCCCCCCCCCccc--ccCCCCcEEEccCccccCCCC----ccccCCCcceEEEeccccccccCCCccCCC
Q 002214 348 NLINLTTLSLGDNNLSGSLPITL--GRLKKLQGLDLQNNKFEGPIP----QEFCHFSRLYVVYLNRNKLSGSIPSCLGDL 421 (952)
Q Consensus 348 ~l~~L~~L~L~~n~l~~~~~~~l--~~l~~L~~L~L~~N~i~~~~~----~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 421 (952)
.+++|++|++++|.+++..|..+ ..+++|++|+|++|.+++..+ ..+..+++|++|+|++|++.+..+..|..+
T Consensus 89 ~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l 168 (310)
T 4glp_A 89 AYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAF 168 (310)
T ss_dssp HHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCC
T ss_pred ccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccC
Confidence 34679999999999999999888 899999999999999987555 445679999999999999998888999999
Q ss_pred CCCcEEeccccccCC---cC-CccccCCCCCceeEecCCccCCCCch----hhhcccccceeecCCcccCCCCcccccCC
Q 002214 422 NSLRILSLSSNELTS---VI-PSTFWNLEDILGFDFSSNSLNGSLPL----EIENLKAVVDIYLSRNNLSGNIPSTIIGL 493 (952)
Q Consensus 422 ~~L~~L~L~~N~l~~---~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~----~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 493 (952)
++|++|+|++|++.+ .. +..+..+++|++|+|++|+++. ++. .+..+++|++|+|++|++++..|..+..+
T Consensus 169 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 247 (310)
T 4glp_A 169 PALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRC 247 (310)
T ss_dssp TTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSC
T ss_pred CCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhc
Confidence 999999999999875 22 2345789999999999999973 343 35788999999999999998878887776
Q ss_pred ---CCCceEEccCccccCcccccccccccccEEeCCCCcccccCccchhccccccccccccccccc
Q 002214 494 ---KNLQHLSLEHNKLQGPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFNKLVG 556 (952)
Q Consensus 494 ---~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 556 (952)
++|++|+|++|+|+ .+|..+. ++|+.|+|++|+|++. |. +..+++|+.|++++|+|+.
T Consensus 248 ~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 248 MWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred cCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 69999999999999 5676664 8999999999999965 43 7889999999999999974
No 333
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=2.1e-24 Score=230.08 Aligned_cols=186 Identities=25% Similarity=0.274 Sum_probs=115.1
Q ss_pred CCcccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCccCCCCCCcEEe
Q 002214 349 LINLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLRILS 428 (952)
Q Consensus 349 l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 428 (952)
+++|++|++++|.+++. ..+..+++|++|++++|.+++..+..|..+++|++|+|++|++++..+..|..+++|++|+
T Consensus 62 l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 139 (272)
T 3rfs_A 62 LPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLN 139 (272)
T ss_dssp CTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEE
Confidence 33444444444444431 2444555555555555555544444455555555555555555545555556666666666
Q ss_pred ccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEccCccccC
Q 002214 429 LSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNKLQG 508 (952)
Q Consensus 429 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 508 (952)
+++|+++++.+..|..+++|+.|++++|++++..+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|.+.+
T Consensus 140 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 219 (272)
T 3rfs_A 140 LAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 219 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc
Confidence 66666666555556666666666666666665555556667777777777777776666667777777777777777764
Q ss_pred cccccccccccccEEeCCCCcccccCccchhcccc
Q 002214 509 PIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLY 543 (952)
Q Consensus 509 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 543 (952)
. +++|+.|+++.|.++|.+|..++.++.
T Consensus 220 ~-------~~~l~~l~~~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 220 T-------CPGIRYLSEWINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp C-------TTTTHHHHHHHHHTGGGBBCTTSCBCG
T ss_pred c-------CcHHHHHHHHHHhCCCcccCcccccCC
Confidence 3 346777788888888888877766554
No 334
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=6.6e-23 Score=215.70 Aligned_cols=181 Identities=24% Similarity=0.280 Sum_probs=132.8
Q ss_pred CcccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCccCCCCCCcEEec
Q 002214 350 INLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLRILSL 429 (952)
Q Consensus 350 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 429 (952)
.+.++++++++.++ .+|..+. ++++.|+|++|.+++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 14 ~~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 14 EGKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 35678888888888 4444443 57888888888888877778888888888888888888777777788888888888
Q ss_pred cccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEccCccccCc
Q 002214 430 SSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNKLQGP 509 (952)
Q Consensus 430 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 509 (952)
++|+++++.+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+++.+..|..+++|+.|+|++|+|++.
T Consensus 91 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 170 (251)
T 3m19_A 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSV 170 (251)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCcc
Confidence 88888877777777777777777777777765555566677777777777777766555666677777777777777665
Q ss_pred ccccccccccccEEeCCCCccccc
Q 002214 510 IPESFGELVSLEFLDLSNNDLSGV 533 (952)
Q Consensus 510 ~~~~~~~l~~L~~L~Ls~N~l~~~ 533 (952)
.+..|..+++|+.|+|++|+++..
T Consensus 171 ~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 171 PHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CHHHHhCCCCCCEEEeeCCceeCC
Confidence 555666666777777777766643
No 335
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=1.5e-23 Score=218.93 Aligned_cols=196 Identities=17% Similarity=0.209 Sum_probs=144.6
Q ss_pred cccEEEccCCCCCCCCCcccccCCCCcEEEccCcc-ccCCCCccccCCCcceEEEecc-ccccccCCCccCCCCCCcEEe
Q 002214 351 NLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNK-FEGPIPQEFCHFSRLYVVYLNR-NKLSGSIPSCLGDLNSLRILS 428 (952)
Q Consensus 351 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~-i~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~ 428 (952)
+|++|++++|+++++.+..|..+++|++|++++|. ++.+.+..|.++++|++|++++ |++++..+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 67788888888887777778888888888888886 7767777788888888888887 788766667777888888888
Q ss_pred ccccccCCcCCccccCCCCCc---eeEecCC-ccCCCCchhhhcccccc-eeecCCcccCCCCcccccCCCCCceEEccC
Q 002214 429 LSSNELTSVIPSTFWNLEDIL---GFDFSSN-SLNGSLPLEIENLKAVV-DIYLSRNNLSGNIPSTIIGLKNLQHLSLEH 503 (952)
Q Consensus 429 L~~N~l~~~~~~~~~~l~~L~---~L~Ls~N-~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 503 (952)
+++|+++++ |. |..+++|+ .|++++| ++++..+..|.++++|+ .|++++|+++.+.+..|.. ++|+.|+|++
T Consensus 112 l~~n~l~~l-p~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~ 188 (239)
T 2xwt_C 112 IFNTGLKMF-PD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNK 188 (239)
T ss_dssp EEEECCCSC-CC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECTT
T ss_pred CCCCCCccc-cc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCC
Confidence 888888764 33 77777777 7888887 77766666677777777 7888777777544445555 6777788887
Q ss_pred cc-ccCccccccccc-ccccEEeCCCCcccccCccchhccccccccccccc
Q 002214 504 NK-LQGPIPESFGEL-VSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFN 552 (952)
Q Consensus 504 N~-l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N 552 (952)
|+ +++..+..|..+ ++|+.|+|++|+|++..+. .+++|+.|+++++
T Consensus 189 n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 189 NKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp CTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred CCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 74 776666677777 7778888888777754333 4566677777665
No 336
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=6e-23 Score=216.01 Aligned_cols=184 Identities=22% Similarity=0.276 Sum_probs=170.1
Q ss_pred CCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCccCCCCCCcEEeccccccCCcCCccccCCCCCceeEe
Q 002214 374 KKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLRILSLSSNELTSVIPSTFWNLEDILGFDF 453 (952)
Q Consensus 374 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 453 (952)
...++++++++.++. .|..+. ++++.|+|++|++++..+..|.++++|++|+|++|+|+++.+..|..+++|+.|+|
T Consensus 14 ~~~~~l~~~~~~l~~-~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 14 EGKKEVDCQGKSLDS-VPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGGTEEECTTCCCSS-CCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCeEEecCCCCccc-cCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 457899999999984 555553 68999999999999988989999999999999999999999999999999999999
Q ss_pred cCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEccCccccCcccccccccccccEEeCCCCccccc
Q 002214 454 SSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNKLQGPIPESFGELVSLEFLDLSNNDLSGV 533 (952)
Q Consensus 454 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 533 (952)
++|++++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|++.
T Consensus 91 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 170 (251)
T 3m19_A 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSV 170 (251)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCcc
Confidence 99999988888999999999999999999988888899999999999999999987777899999999999999999988
Q ss_pred CccchhcccccccccccccccccCCCC
Q 002214 534 IPASLEKLLYLKSLNLSFNKLVGEIPR 560 (952)
Q Consensus 534 ~~~~~~~l~~L~~L~l~~N~l~~~~p~ 560 (952)
.+..|..+++|+.|++++|+|+|....
T Consensus 171 ~~~~~~~l~~L~~L~l~~N~~~c~~~~ 197 (251)
T 3m19_A 171 PHGAFDRLGKLQTITLFGNQFDCSRCE 197 (251)
T ss_dssp CTTTTTTCTTCCEEECCSCCBCTTSTT
T ss_pred CHHHHhCCCCCCEEEeeCCceeCCccc
Confidence 888999999999999999999987543
No 337
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.89 E-value=9.1e-23 Score=221.34 Aligned_cols=196 Identities=23% Similarity=0.371 Sum_probs=173.5
Q ss_pred ccCCCcccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCccCCCCCCc
Q 002214 346 IGNLINLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLR 425 (952)
Q Consensus 346 ~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 425 (952)
...+++|++|++++|.++. ++ .+..+++|++|++++|.+++..+ +..+++|++|+|++|++++. + .+..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~ 110 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV-S-AIAGLQSIK 110 (308)
T ss_dssp HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC-G-GGTTCTTCC
T ss_pred HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc-h-hhcCCCCCC
Confidence 4467899999999999985 44 68899999999999999986555 99999999999999999854 3 689999999
Q ss_pred EEeccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEccCcc
Q 002214 426 ILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNK 505 (952)
Q Consensus 426 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 505 (952)
+|++++|+++++.+ +..+++|+.|++++|++++..+ +..+++|+.|+|++|++++..+ +..+++|+.|+|++|+
T Consensus 111 ~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~ 184 (308)
T 1h6u_A 111 TLDLTSTQITDVTP--LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNK 184 (308)
T ss_dssp EEECTTSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEECCCCCCCCchh--hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCc
Confidence 99999999997643 8999999999999999996544 8899999999999999996544 8999999999999999
Q ss_pred ccCcccccccccccccEEeCCCCcccccCccchhcccccccccccccccccC
Q 002214 506 LQGPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFNKLVGE 557 (952)
Q Consensus 506 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 557 (952)
+++..+ +..+++|+.|+|++|++++..+ +..+++|+.|++++|++++.
T Consensus 185 l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~~ 232 (308)
T 1h6u_A 185 ISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITNQ 232 (308)
T ss_dssp CCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEECC
T ss_pred cCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeecC
Confidence 996554 8999999999999999997653 89999999999999999863
No 338
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.88 E-value=2.5e-22 Score=209.65 Aligned_cols=203 Identities=21% Similarity=0.223 Sum_probs=157.1
Q ss_pred cCCccccCCcccCeeeccccccccccCCCcCCcCCCcEEeCcCCc-ccccCChhhcCCCCCCeEeecC-ccCccccCccc
Q 002214 48 TIPSHLGNLSSLQTLVLSRNWFSGTIPKEIGNLTKLKELHLDYNK-LQGEIPEELGNLAELEMLVLNN-NLLTGTIPASI 125 (952)
Q Consensus 48 ~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~-l~~~~p~~l~~l~~L~~L~L~~-n~l~~~~p~~~ 125 (952)
.+|. +. ++|+.|++++|++++..+..+..+++|++|+|++|+ ++...+.+|+++++|++|+|++ |++++..+..+
T Consensus 25 ~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f 101 (239)
T 2xwt_C 25 RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDAL 101 (239)
T ss_dssp SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSE
T ss_pred ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHh
Confidence 5676 43 389999999999997666689999999999999997 8866667899999999999998 99883322333
Q ss_pred ccccccccceeeccccccccCCCCCCCCCCccceEEcccCcccccCCccccCCCCCc---EEEccCC-cccccCCccccc
Q 002214 126 FNLSFISTALDFSDNSLTGSFPYDMCPGLPRLKGLYVSYNQFKGPIPNNLWHCKELS---SVSLSYN-QFTGRLPRDLGN 201 (952)
Q Consensus 126 ~~l~~l~~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~---~L~L~~N-~l~~~~~~~~~~ 201 (952)
.++++|++|++++|++++ +|. |..+++|+ .|++++| ++++..+..|.+
T Consensus 102 --------------------------~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~ 153 (239)
T 2xwt_C 102 --------------------------KELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQG 153 (239)
T ss_dssp --------------------------ECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTT
T ss_pred --------------------------CCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccc
Confidence 356678888888888774 555 77777777 8888888 888777777888
Q ss_pred cCCcc-EEEeeCCcCCccCchhhhccCCCcEeeecccc-ccccCCccccCC-CCccEEEeeCccccccCCCCcccCCCCC
Q 002214 202 STKLK-SLDLGFNNLNGEIPQEIGNLRNLEILGIDQSN-LVGFVPDTIFNI-STLKILSLFNNTLSGNLPSSKNLIGLPN 278 (952)
Q Consensus 202 l~~L~-~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~-~~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~l~~l~~ 278 (952)
+++|+ +|++++|+++...+..|.. ++|+.|++++|. +..+.+..|..+ ++|+.|++++|++++. |.. .+++
T Consensus 154 l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l-~~~----~~~~ 227 (239)
T 2xwt_C 154 LCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTAL-PSK----GLEH 227 (239)
T ss_dssp TBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCC-CCT----TCTT
T ss_pred hhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccC-Chh----Hhcc
Confidence 88888 8888888887444444444 788888888884 877777788888 8888888888888743 321 5678
Q ss_pred cceEEcccC
Q 002214 279 LEGLNLGLN 287 (952)
Q Consensus 279 L~~L~L~~N 287 (952)
|+.|+++++
T Consensus 228 L~~L~l~~~ 236 (239)
T 2xwt_C 228 LKELIARNT 236 (239)
T ss_dssp CSEEECTTC
T ss_pred CceeeccCc
Confidence 888888776
No 339
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=8.4e-25 Score=246.17 Aligned_cols=203 Identities=19% Similarity=0.246 Sum_probs=119.7
Q ss_pred cCCCcccEEEccCCCCCC----CCCcccccCCCCcEEEccCccccCCCCccccC----C---------CcceEEEecccc
Q 002214 347 GNLINLTTLSLGDNNLSG----SLPITLGRLKKLQGLDLQNNKFEGPIPQEFCH----F---------SRLYVVYLNRNK 409 (952)
Q Consensus 347 ~~l~~L~~L~L~~n~l~~----~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~----l---------~~L~~L~L~~N~ 409 (952)
..+++|++|+|++|.++. .++..+..+++|++|+|++|.|....+..+.. + ++|++|+|++|+
T Consensus 91 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~ 170 (386)
T 2ca6_A 91 LKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNR 170 (386)
T ss_dssp TTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSC
T ss_pred hhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCC
Confidence 345566666666666664 24555666666666666666665333333322 2 566666666666
Q ss_pred cc-ccCC---CccCCCCCCcEEeccccccCC-----cCCccccCCCCCceeEecCCccC----CCCchhhhcccccceee
Q 002214 410 LS-GSIP---SCLGDLNSLRILSLSSNELTS-----VIPSTFWNLEDILGFDFSSNSLN----GSLPLEIENLKAVVDIY 476 (952)
Q Consensus 410 l~-~~~~---~~~~~l~~L~~L~L~~N~l~~-----~~~~~~~~l~~L~~L~Ls~N~l~----~~~~~~~~~l~~L~~L~ 476 (952)
++ ..++ ..+..+++|++|++++|+++. ..+..+..+++|+.|+|++|.++ ..+|..+..+++|+.|+
T Consensus 171 l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~ 250 (386)
T 2ca6_A 171 LENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELG 250 (386)
T ss_dssp CTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEE
T ss_pred CCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEE
Confidence 65 2233 345566677777777777652 23335666666777777777664 34566666667777777
Q ss_pred cCCcccCCC----Cccccc--CCCCCceEEccCccccC----cccccc-cccccccEEeCCCCcccccCc--cch-hccc
Q 002214 477 LSRNNLSGN----IPSTII--GLKNLQHLSLEHNKLQG----PIPESF-GELVSLEFLDLSNNDLSGVIP--ASL-EKLL 542 (952)
Q Consensus 477 Ls~N~l~~~----~~~~~~--~l~~L~~L~L~~N~l~~----~~~~~~-~~l~~L~~L~Ls~N~l~~~~~--~~~-~~l~ 542 (952)
|++|++++. ++..+. .+++|+.|+|++|+|++ .+|..+ .++++|+.|+|++|++++..+ ..+ ..++
T Consensus 251 L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~~~~~l~~~l~ 330 (386)
T 2ca6_A 251 LNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDDVVDEIREVFS 330 (386)
T ss_dssp CTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSHHHHHHHHHHH
T ss_pred CCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchhHHHHHHHHhh
Confidence 777776643 344442 36777777777777775 355555 556777777777777775543 222 2344
Q ss_pred ccccccc
Q 002214 543 YLKSLNL 549 (952)
Q Consensus 543 ~L~~L~l 549 (952)
.++.+++
T Consensus 331 ~~~~~~l 337 (386)
T 2ca6_A 331 TRGRGEL 337 (386)
T ss_dssp HHTCCEE
T ss_pred hcCcchh
Confidence 4544444
No 340
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.88 E-value=1.4e-24 Score=239.53 Aligned_cols=268 Identities=18% Similarity=0.224 Sum_probs=201.8
Q ss_pred CCCCCceEEEeCCCCeEEEEEecCCCCcccCCccccCC--cccCeeeccccccccccCCCcCCcCCCcEEeCcCCccccc
Q 002214 19 SVCSWMGITCDVYGNRVTSLTISDLGLAGTIPSHLGNL--SSLQTLVLSRNWFSGTIPKEIGNLTKLKELHLDYNKLQGE 96 (952)
Q Consensus 19 ~~c~w~~v~c~~~~~~~~~l~l~~~~~~~~~p~~l~~l--~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~ 96 (952)
-|.+|.++.|+ +...+.+|++++.+. |..+..+ ++++.|++++|.+.+..+. +..+++|++|+|++|.+.+.
T Consensus 35 vc~~W~~~~~~--~~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~ 108 (336)
T 2ast_B 35 VCKRWYRLASD--ESLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVS 108 (336)
T ss_dssp SCHHHHHHHTC--STTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHH
T ss_pred HHHHHHHHhcC--chhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHH
Confidence 46679988876 335789999998886 5667777 8999999999999976665 67899999999999999865
Q ss_pred -CChhhcCCCCCCeEeecCccCccccCcccccccccccceeeccc-cccccCCCCCCCCCCccceEEcccC-ccccc-CC
Q 002214 97 -IPEELGNLAELEMLVLNNNLLTGTIPASIFNLSFISTALDFSDN-SLTGSFPYDMCPGLPRLKGLYVSYN-QFKGP-IP 172 (952)
Q Consensus 97 -~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~l~~~L~l~~n-~l~~~~~~~~~~~l~~L~~L~L~~n-~l~~~-~~ 172 (952)
+|..+.++++|++|+|++|.+++..|..+.++..+ +.|++++| .+++......+.++++|++|++++| ++++. ++
T Consensus 109 ~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L-~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~ 187 (336)
T 2ast_B 109 TLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNL-VRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQ 187 (336)
T ss_dssp HHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTC-SEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHH
T ss_pred HHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCC-CEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHH
Confidence 88899999999999999999998888888776654 88888888 5664322233456788888888888 77743 46
Q ss_pred ccccCCC-CCcEEEccCC--ccc-ccCCccccccCCccEEEeeCCc-CCccCchhhhccCCCcEeeecccc-ccccCCcc
Q 002214 173 NNLWHCK-ELSSVSLSYN--QFT-GRLPRDLGNSTKLKSLDLGFNN-LNGEIPQEIGNLRNLEILGIDQSN-LVGFVPDT 246 (952)
Q Consensus 173 ~~l~~l~-~L~~L~L~~N--~l~-~~~~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~n~-~~~~~~~~ 246 (952)
..+..++ +|++|+|++| .++ +.+|..+..+++|++|+|++|. +++..+..+..+++|+.|++++|. +.......
T Consensus 188 ~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~ 267 (336)
T 2ast_B 188 VAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLE 267 (336)
T ss_dssp HHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGG
T ss_pred HHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHH
Confidence 6677788 8888888888 444 3456667778888888888888 666777788888888888888875 22222235
Q ss_pred ccCCCCccEEEeeCccccccCCCCcccCCC-CCcceEEcccCcCCCCCCccccc
Q 002214 247 IFNISTLKILSLFNNTLSGNLPSSKNLIGL-PNLEGLNLGLNNLSGSIPSFFFN 299 (952)
Q Consensus 247 ~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l-~~L~~L~L~~N~l~~~~~~~~~~ 299 (952)
+.++++|+.|++++| +... .+..+ .+|..|++++|++++..|..+..
T Consensus 268 l~~~~~L~~L~l~~~-i~~~-----~~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 268 LGEIPTLKTLQVFGI-VPDG-----TLQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp GGGCTTCCEEECTTS-SCTT-----CHHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred HhcCCCCCEEeccCc-cCHH-----HHHHHHhhCcceEEecccCccccCCcccc
Confidence 677888888888888 4321 12223 23667778888888877776543
No 341
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.88 E-value=1.3e-23 Score=233.88 Aligned_cols=170 Identities=20% Similarity=0.264 Sum_probs=100.0
Q ss_pred CcccEEEccCCCCCCCCCccccc-----CCCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCccCCCC-C
Q 002214 350 INLTTLSLGDNNLSGSLPITLGR-----LKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGDLN-S 423 (952)
Q Consensus 350 ~~L~~L~L~~n~l~~~~~~~l~~-----l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~ 423 (952)
++|++|+|++|++++..+..+.. .++|++|+|++|.|++..+..+ +..+..++ +
T Consensus 109 ~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l--------------------~~~l~~~~~~ 168 (362)
T 3goz_A 109 FTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDEL--------------------IQILAAIPAN 168 (362)
T ss_dssp TTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHH--------------------HHHHHTSCTT
T ss_pred CCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHH--------------------HHHHhcCCcc
Confidence 45666666666666444433322 2456666666665553322222 22223333 5
Q ss_pred CcEEeccccccCCcCCcccc----CC-CCCceeEecCCccCCC----Cchhhhc-ccccceeecCCcccCCCCc----cc
Q 002214 424 LRILSLSSNELTSVIPSTFW----NL-EDILGFDFSSNSLNGS----LPLEIEN-LKAVVDIYLSRNNLSGNIP----ST 489 (952)
Q Consensus 424 L~~L~L~~N~l~~~~~~~~~----~l-~~L~~L~Ls~N~l~~~----~~~~~~~-l~~L~~L~Ls~N~l~~~~~----~~ 489 (952)
|++|+|++|++++..+..+. .. ++|+.|+|++|.|+.. ++..+.. .++|++|+|++|++++..+ ..
T Consensus 169 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 248 (362)
T 3goz_A 169 VNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLL 248 (362)
T ss_dssp CCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHT
T ss_pred ccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHH
Confidence 66666666666555443332 23 4666666666666642 3444444 3478888888888876544 33
Q ss_pred ccCCCCCceEEccCccccCc-------ccccccccccccEEeCCCCcccccCccchh
Q 002214 490 IIGLKNLQHLSLEHNKLQGP-------IPESFGELVSLEFLDLSNNDLSGVIPASLE 539 (952)
Q Consensus 490 ~~~l~~L~~L~L~~N~l~~~-------~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 539 (952)
+..+++|+.|+|++|.+.+. ++..+..+++|+.||+++|++....+..+.
T Consensus 249 ~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~~~~~ 305 (362)
T 3goz_A 249 KDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSIPIS 305 (362)
T ss_dssp TTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGCHHHH
T ss_pred HhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcchHHHH
Confidence 46678888888888885433 334677788888899999988766454443
No 342
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.87 E-value=1.2e-23 Score=234.36 Aligned_cols=105 Identities=21% Similarity=0.215 Sum_probs=57.3
Q ss_pred EEcccCcccccCCccccCCCCCcEEEccCCcccccCC----ccccccC-CccEEEeeCCcCCccCchhhhcc-----CCC
Q 002214 160 LYVSYNQFKGPIPNNLWHCKELSSVSLSYNQFTGRLP----RDLGNST-KLKSLDLGFNNLNGEIPQEIGNL-----RNL 229 (952)
Q Consensus 160 L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~L 229 (952)
+.+++|++++.+|..+...++|++|+|++|.+++..+ ..|..++ +|++|+|++|.+++..+..+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 3455555555555544444556666666666654444 4555555 56666666666665555555554 556
Q ss_pred cEeeeccccccccCCccccC----C-CCccEEEeeCcccc
Q 002214 230 EILGIDQSNLVGFVPDTIFN----I-STLKILSLFNNTLS 264 (952)
Q Consensus 230 ~~L~L~~n~~~~~~~~~~~~----l-~~L~~L~Ls~N~l~ 264 (952)
++|+|++|++.+..+..+.. + ++|++|+|++|+++
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~ 122 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFS 122 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGG
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCC
Confidence 66666665555554443322 2 45555555555554
No 343
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.87 E-value=1.8e-22 Score=215.15 Aligned_cols=150 Identities=17% Similarity=0.106 Sum_probs=120.6
Q ss_pred HHHHhccCCccceecCccceEEEEEEeCCCcEEEEEEeeccCc------------------hhhHHHHHHHHHHHhCCCC
Q 002214 659 LLRATDQFSEENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQRE------------------GALNSFDAECEILKTIRHR 720 (952)
Q Consensus 659 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l~h~ 720 (952)
+......|.+.+.||+|+||.||+|.+.+|+.||||+++.... .....+.+|+.++++++
T Consensus 85 ~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~-- 162 (282)
T 1zar_A 85 LVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-- 162 (282)
T ss_dssp HHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--
T ss_pred HHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--
Confidence 3444556778899999999999999997899999999864321 12456889999999999
Q ss_pred ccceeeeEeecCCeeEEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCC
Q 002214 721 NLVKIISSCTNHNFKALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDS 800 (952)
Q Consensus 721 niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~ 800 (952)
| +++.+++.. +..++||||+++|+|.+ +.. .....++.|+++|++|| |++||+||||||+|||++ +
T Consensus 163 ~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~l---H~~giiHrDlkp~NILl~-~ 228 (282)
T 1zar_A 163 G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKF---YHRGIVHGDLSQYNVLVS-E 228 (282)
T ss_dssp T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHH---HHTTEECSCCSTTSEEEE-T
T ss_pred C-CCcCeEEec-cceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHH---HHCCCEeCCCCHHHEEEE-C
Confidence 4 666665543 45699999999999988 422 23457999999999999 799999999999999999 9
Q ss_pred CcEEEeccccccccCCcCcccccccccccccccccccC
Q 002214 801 MVAHLSDFGIAKLLSEEDSMKQTQTLATIGYIAPEYGR 838 (952)
Q Consensus 801 ~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~ 838 (952)
+.+||+|||+|+. +..|.|||++.
T Consensus 229 ~~vkl~DFG~a~~--------------~~~~~a~e~l~ 252 (282)
T 1zar_A 229 EGIWIIDFPQSVE--------------VGEEGWREILE 252 (282)
T ss_dssp TEEEECCCTTCEE--------------TTSTTHHHHHH
T ss_pred CcEEEEECCCCeE--------------CCCCCHHHHHH
Confidence 9999999999973 33467888764
No 344
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.87 E-value=4.4e-22 Score=216.51 Aligned_cols=181 Identities=19% Similarity=0.199 Sum_probs=141.3
Q ss_pred cCCCcccEEEccCCCCCCCCC----cccccCCCCcEEEccCccccCCCCccccCCCcceEEEecccccccc---C-CCcc
Q 002214 347 GNLINLTTLSLGDNNLSGSLP----ITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGS---I-PSCL 418 (952)
Q Consensus 347 ~~l~~L~~L~L~~n~l~~~~~----~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~---~-~~~~ 418 (952)
+.+++|++|+|++|.+++..+ ..+..+++|++|+|++|.|.+..+..|..+++|++|+|++|++.+. . +..+
T Consensus 114 ~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 193 (310)
T 4glp_A 114 ATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCP 193 (310)
T ss_dssp CCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCT
T ss_pred ccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhh
Confidence 345667777777777775443 3345678888888888888877778888888888888888887532 1 3345
Q ss_pred CCCCCCcEEeccccccCCcCCc---cccCCCCCceeEecCCccCCCCchhhhcc---cccceeecCCcccCCCCcccccC
Q 002214 419 GDLNSLRILSLSSNELTSVIPS---TFWNLEDILGFDFSSNSLNGSLPLEIENL---KAVVDIYLSRNNLSGNIPSTIIG 492 (952)
Q Consensus 419 ~~l~~L~~L~L~~N~l~~~~~~---~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l---~~L~~L~Ls~N~l~~~~~~~~~~ 492 (952)
..+++|++|+|++|+++...+. .+..+++|+.|+|++|++++..|..+..+ ++|++|+|++|+|+ .+|..+.
T Consensus 194 ~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~- 271 (310)
T 4glp_A 194 HKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP- 271 (310)
T ss_dssp TSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC-
T ss_pred hcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc-
Confidence 7888999999999999744322 35778999999999999998778777776 69999999999999 5566664
Q ss_pred CCCCceEEccCccccCcccccccccccccEEeCCCCcccc
Q 002214 493 LKNLQHLSLEHNKLQGPIPESFGELVSLEFLDLSNNDLSG 532 (952)
Q Consensus 493 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 532 (952)
++|+.|+|++|+|++. |. +..+++|+.|+|++|+|+.
T Consensus 272 -~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 272 -AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp -SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred -CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 7999999999999964 43 7888999999999999973
No 345
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.86 E-value=1.4e-21 Score=212.10 Aligned_cols=173 Identities=23% Similarity=0.394 Sum_probs=148.7
Q ss_pred cCCCcccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCccCCCCCCcE
Q 002214 347 GNLINLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLRI 426 (952)
Q Consensus 347 ~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 426 (952)
..+++|++|++++|++++..+ +..+++|++|++++|.+++. ..+..+++|+.|++++|++++. +. +..+++|++
T Consensus 60 ~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~ 133 (308)
T 1h6u_A 60 QYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLDLTSTQITDV-TP-LAGLSNLQV 133 (308)
T ss_dssp GGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEEECTTSCCCCC-GG-GTTCTTCCE
T ss_pred hccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCCEEECCCCCCCCc-hh-hcCCCCCCE
Confidence 457789999999999986554 88999999999999999854 3688899999999999999854 33 889999999
Q ss_pred EeccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEccCccc
Q 002214 427 LSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNKL 506 (952)
Q Consensus 427 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 506 (952)
|++++|+++++.+ +..+++|+.|++++|++++..+ +..+++|+.|+|++|++++..+ +..+++|++|+|++|++
T Consensus 134 L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l 207 (308)
T 1h6u_A 134 LYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQI 207 (308)
T ss_dssp EECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCC
T ss_pred EECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCcc
Confidence 9999999987655 8899999999999999986444 8899999999999999996544 88999999999999999
Q ss_pred cCcccccccccccccEEeCCCCccccc
Q 002214 507 QGPIPESFGELVSLEFLDLSNNDLSGV 533 (952)
Q Consensus 507 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 533 (952)
++..+ +..+++|+.|+|++|++++.
T Consensus 208 ~~~~~--l~~l~~L~~L~l~~N~i~~~ 232 (308)
T 1h6u_A 208 SDVSP--LANTSNLFIVTLTNQTITNQ 232 (308)
T ss_dssp CBCGG--GTTCTTCCEEEEEEEEEECC
T ss_pred Ccccc--ccCCCCCCEEEccCCeeecC
Confidence 96553 89999999999999999853
No 346
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.86 E-value=5.6e-24 Score=239.43 Aligned_cols=214 Identities=21% Similarity=0.266 Sum_probs=171.7
Q ss_pred ccCCCcccEEEccCCCC---CCCCCcc-------cccCCCCcEEEccCccccC----CCCccccCCCcceEEEecccccc
Q 002214 346 IGNLINLTTLSLGDNNL---SGSLPIT-------LGRLKKLQGLDLQNNKFEG----PIPQEFCHFSRLYVVYLNRNKLS 411 (952)
Q Consensus 346 ~~~l~~L~~L~L~~n~l---~~~~~~~-------l~~l~~L~~L~L~~N~i~~----~~~~~~~~l~~L~~L~L~~N~l~ 411 (952)
+..+++|++|+|++|.+ ++.+|.. +..+++|++|+|++|.|.. ..+..+..+++|++|+|++|.++
T Consensus 56 l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~ 135 (386)
T 2ca6_A 56 IASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLG 135 (386)
T ss_dssp TTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCH
T ss_pred HHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCC
Confidence 34566677777777533 3333433 4788999999999999986 36778889999999999999997
Q ss_pred ccCCCccC----CC---------CCCcEEeccccccCC-cCC---ccccCCCCCceeEecCCccCC-----CCchhhhcc
Q 002214 412 GSIPSCLG----DL---------NSLRILSLSSNELTS-VIP---STFWNLEDILGFDFSSNSLNG-----SLPLEIENL 469 (952)
Q Consensus 412 ~~~~~~~~----~l---------~~L~~L~L~~N~l~~-~~~---~~~~~l~~L~~L~Ls~N~l~~-----~~~~~~~~l 469 (952)
...+..+. .+ ++|++|++++|+++. ..+ ..+..+++|+.|++++|+++. ..+..+..+
T Consensus 136 ~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~ 215 (386)
T 2ca6_A 136 PQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYC 215 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGC
T ss_pred HHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcC
Confidence 54443333 33 899999999999973 334 467789999999999999983 344478899
Q ss_pred cccceeecCCcccC----CCCcccccCCCCCceEEccCccccCc----ccccc--cccccccEEeCCCCcccc----cCc
Q 002214 470 KAVVDIYLSRNNLS----GNIPSTIIGLKNLQHLSLEHNKLQGP----IPESF--GELVSLEFLDLSNNDLSG----VIP 535 (952)
Q Consensus 470 ~~L~~L~Ls~N~l~----~~~~~~~~~l~~L~~L~L~~N~l~~~----~~~~~--~~l~~L~~L~Ls~N~l~~----~~~ 535 (952)
++|+.|+|++|.++ ..+|..+..+++|+.|+|++|+|++. ++..+ +.+++|+.|+|++|.|++ .+|
T Consensus 216 ~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~ 295 (386)
T 2ca6_A 216 QELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLK 295 (386)
T ss_dssp TTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHH
T ss_pred CCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHH
Confidence 99999999999996 56788899999999999999999865 45666 448999999999999997 477
Q ss_pred cch-hcccccccccccccccccCCC
Q 002214 536 ASL-EKLLYLKSLNLSFNKLVGEIP 559 (952)
Q Consensus 536 ~~~-~~l~~L~~L~l~~N~l~~~~p 559 (952)
..+ .++++|+.|++++|++++..|
T Consensus 296 ~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 296 TVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp HHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred HHHHhcCCCceEEEccCCcCCcchh
Confidence 777 668999999999999986554
No 347
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.86 E-value=2.6e-21 Score=214.23 Aligned_cols=128 Identities=18% Similarity=0.094 Sum_probs=60.5
Q ss_pred EEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCccccCCCcceEEEecc-ccccccCCCccCCCC-CCcEEecccc
Q 002214 355 LSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNR-NKLSGSIPSCLGDLN-SLRILSLSSN 432 (952)
Q Consensus 355 L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~-~L~~L~L~~N 432 (952)
+.+++|+++.+.|.+|..+++|++|++++|+|+...+..+....++..|++.+ |++....+..|..+. .++.|+|++|
T Consensus 85 l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N 164 (350)
T 4ay9_X 85 RIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKN 164 (350)
T ss_dssp EEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSS
T ss_pred hcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccc
Confidence 34444555555555666666666666666666555555555555555555543 344434444444443 3555555555
Q ss_pred ccCCcCCccccCCCCCceeEecC-CccCCCCchhhhcccccceeecCCcccC
Q 002214 433 ELTSVIPSTFWNLEDILGFDFSS-NSLNGSLPLEIENLKAVVDIYLSRNNLS 483 (952)
Q Consensus 433 ~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 483 (952)
+|+.+.+..|. ..+|+.|++++ |.++.+.++.|.++++|+.|+|++|+|+
T Consensus 165 ~i~~i~~~~f~-~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~ 215 (350)
T 4ay9_X 165 GIQEIHNSAFN-GTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH 215 (350)
T ss_dssp CCCEECTTSST-TEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCC
T ss_pred cccCCChhhcc-ccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcC
Confidence 55544333332 22344444432 3333222233344444444444444444
No 348
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.86 E-value=5.5e-23 Score=226.84 Aligned_cols=208 Identities=21% Similarity=0.254 Sum_probs=139.6
Q ss_pred CCcccEEEccCCCCCCC-CCcccccCCCCcEEEccCccccCCCCccccCCCcceEEEeccc-cccc-cCCCccCCCCCCc
Q 002214 349 LINLTTLSLGDNNLSGS-LPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRN-KLSG-SIPSCLGDLNSLR 425 (952)
Q Consensus 349 l~~L~~L~L~~n~l~~~-~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N-~l~~-~~~~~~~~l~~L~ 425 (952)
+++|++|++++|.+++. ++..+..+++|++|++++|.+++..+..+..+++|++|+|++| .+++ .++..+..+++|+
T Consensus 92 ~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~ 171 (336)
T 2ast_B 92 PFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLD 171 (336)
T ss_dssp CBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCC
T ss_pred CCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCC
Confidence 34455555555554432 4444555555555555555555444555555555555555555 4443 2444556677777
Q ss_pred EEecccc-ccCCc-CCccccCCC-CCceeEecCCc--cC-CCCchhhhcccccceeecCCcc-cCCCCcccccCCCCCce
Q 002214 426 ILSLSSN-ELTSV-IPSTFWNLE-DILGFDFSSNS--LN-GSLPLEIENLKAVVDIYLSRNN-LSGNIPSTIIGLKNLQH 498 (952)
Q Consensus 426 ~L~L~~N-~l~~~-~~~~~~~l~-~L~~L~Ls~N~--l~-~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~ 498 (952)
+|++++| .+++. .+..+..++ +|+.|++++|. ++ +.++..+..+++|+.|++++|. +++..+..+..+++|++
T Consensus 172 ~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~ 251 (336)
T 2ast_B 172 ELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQH 251 (336)
T ss_dssp EEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCE
T ss_pred EEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCE
Confidence 7777777 66643 355566777 78888888773 44 3456777888999999999998 77677778889999999
Q ss_pred EEccCcc-ccCcccccccccccccEEeCCCCcccccCccchhccc-ccccccccccccccCCCC
Q 002214 499 LSLEHNK-LQGPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLL-YLKSLNLSFNKLVGEIPR 560 (952)
Q Consensus 499 L~L~~N~-l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~l~~N~l~~~~p~ 560 (952)
|+|++|. +.......+..+++|+.|++++| ++ ...+..+. .|..|++++|++++..|.
T Consensus 252 L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~~~~~~ 311 (336)
T 2ast_B 252 LSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VP---DGTLQLLKEALPHLQINCSHFTTIARP 311 (336)
T ss_dssp EECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SC---TTCHHHHHHHSTTSEESCCCSCCTTCS
T ss_pred eeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cC---HHHHHHHHhhCcceEEecccCccccCC
Confidence 9999995 33222236888999999999999 33 34555553 488888999999998886
No 349
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.86 E-value=8.9e-22 Score=217.92 Aligned_cols=227 Identities=16% Similarity=0.153 Sum_probs=178.3
Q ss_pred CcccEEEccCCCCCCCCCcccccCCCCcEEEccCccccC-CCCccccCCCcceE-EEeccccccccCCCccCCCCCCcEE
Q 002214 350 INLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEG-PIPQEFCHFSRLYV-VYLNRNKLSGSIPSCLGDLNSLRIL 427 (952)
Q Consensus 350 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~-~~~~~~~~l~~L~~-L~L~~N~l~~~~~~~~~~l~~L~~L 427 (952)
+++++|+|++|+|+.+.+.+|.++++|++|+|++|++.+ +.+.+|.+++++.. +.++.|+++...|..|..+++|++|
T Consensus 30 ~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L 109 (350)
T 4ay9_X 30 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 109 (350)
T ss_dssp TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEE
T ss_pred CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccc
Confidence 578999999999997777889999999999999999855 45567888888764 6777899998888999999999999
Q ss_pred eccccccCCcCCccccCCCCCceeEecC-CccCCCCchhhhccc-ccceeecCCcccCCCCcccccCCCCCceEEccC-c
Q 002214 428 SLSSNELTSVIPSTFWNLEDILGFDFSS-NSLNGSLPLEIENLK-AVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEH-N 504 (952)
Q Consensus 428 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~-N 504 (952)
++++|+++...+..+....++..|++.+ |++....+..|..+. .++.|+|++|+|+.+.+..| ...+|+.|++++ |
T Consensus 110 ~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f-~~~~L~~l~l~~~n 188 (350)
T 4ay9_X 110 LISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAF-NGTQLDELNLSDNN 188 (350)
T ss_dssp EEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSS-TTEEEEEEECTTCT
T ss_pred cccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCCChhhc-cccchhHHhhccCC
Confidence 9999999988888888888889999866 567766666777765 68889999999996555555 457899999974 7
Q ss_pred cccCcccccccccccccEEeCCCCcccccCccchhcccccccccccccccccCCCCCCCcccccccccccCccCCCC
Q 002214 505 KLQGPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFNKLVGEIPRGGAFANFSAESFIGNDLLCGS 581 (952)
Q Consensus 505 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~ 581 (952)
.++.+.+..|..+++|+.|||++|+|+.+++..|.++++|+.+++.+ ...+|....+.++....+ .+++.|.+
T Consensus 189 ~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~~~---l~~lP~l~~l~~L~~l~l-~~~~~c~~ 261 (350)
T 4ay9_X 189 NLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYN---LKKLPTLEKLVALMEASL-TYPSHCCA 261 (350)
T ss_dssp TCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTCTT---CCCCCCTTTCCSCCEEEC-SCHHHHHH
T ss_pred cccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccCCC---cCcCCCchhCcChhhCcC-CCCccccc
Confidence 78766667889999999999999999977676777777666665533 335665555666655443 46677744
No 350
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.85 E-value=1.3e-21 Score=200.98 Aligned_cols=156 Identities=27% Similarity=0.336 Sum_probs=110.7
Q ss_pred EEEeccccccccCCCccCCCCCCcEEeccccccCCcCC-ccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCc
Q 002214 402 VVYLNRNKLSGSIPSCLGDLNSLRILSLSSNELTSVIP-STFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRN 480 (952)
Q Consensus 402 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 480 (952)
.+++++|.++ .+|..+. +.+++|+|++|+|+++.+ ..|..+++|+.|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 4444444444 2333222 234566666666665533 34666666677777777666666666777777777777777
Q ss_pred ccCCCCcccccCCCCCceEEccCccccCcccccccccccccEEeCCCCcccccCccchhcccccccccccccccccCCCC
Q 002214 481 NLSGNIPSTIIGLKNLQHLSLEHNKLQGPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFNKLVGEIPR 560 (952)
Q Consensus 481 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~ 560 (952)
+|++..+..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|.|.++.
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 171 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYL 171 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGGG
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCch
Confidence 77777777788888888888888888877777888888888888888888877788888888888888888888887764
No 351
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.85 E-value=1.5e-21 Score=200.40 Aligned_cols=138 Identities=22% Similarity=0.350 Sum_probs=97.4
Q ss_pred CCCcEEeccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEc
Q 002214 422 NSLRILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSL 501 (952)
Q Consensus 422 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 501 (952)
++|+.|++++|+|+++.+..|..+++|+.|+|++|+|++..|..|.++++|++|+|++|+|+.+.+..|.++++|++|+|
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 111 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLL 111 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEEC
Confidence 45666666666666555556666666666666666666555666666677777777777777665666777777777777
Q ss_pred cCccccCcccccccccccccEEeCCCCcccccCccchhcccccccccccccccccCCC
Q 002214 502 EHNKLQGPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFNKLVGEIP 559 (952)
Q Consensus 502 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 559 (952)
++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|.|.+.
T Consensus 112 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 169 (220)
T 2v9t_B 112 NANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCH 169 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred CCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCc
Confidence 7777777767777777777777777777777666677777777778888887777665
No 352
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.84 E-value=1.3e-21 Score=227.54 Aligned_cols=204 Identities=24% Similarity=0.330 Sum_probs=131.0
Q ss_pred ccCCCCCCC-----CCceE-EEeCCCCeEEEEEecCCCCcccCCccccCCcccCeeeccccccccccCCCcCCcCCCcEE
Q 002214 13 NWTSNASVC-----SWMGI-TCDVYGNRVTSLTISDLGLAGTIPSHLGNLSSLQTLVLSRNWFSGTIPKEIGNLTKLKEL 86 (952)
Q Consensus 13 ~~~~~~~~c-----~w~~v-~c~~~~~~~~~l~l~~~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 86 (952)
+|..+.+.| .|.|+ .|.. .+++.|+++++++++ +|..+. ++|+.|+|++|.|+ .+| ..+++|++|
T Consensus 35 ~W~~~~~~~~~~~~~~~~l~~C~~--~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L 105 (571)
T 3cvr_A 35 KWEKQALPGENRNEAVSLLKECLI--NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYL 105 (571)
T ss_dssp HHHTTCCTTCCHHHHHHHHHHHHH--TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEE
T ss_pred HHhccCCccccccchhhhcccccc--CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEE
Confidence 576667788 69999 7863 478999999999986 887764 78999999999998 777 457899999
Q ss_pred eCcCCcccccCChhhcCCCCCCeEeecCccCccccCcccccccccccceeeccccccccCCCCCCCCCCccceEEcccCc
Q 002214 87 HLDYNKLQGEIPEELGNLAELEMLVLNNNLLTGTIPASIFNLSFISTALDFSDNSLTGSFPYDMCPGLPRLKGLYVSYNQ 166 (952)
Q Consensus 87 ~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~l~~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~ 166 (952)
+|++|++++ +|. +.+ +|++|+|++|++++ +|. .+. .++.|++++|++++ +|. .+++|++|+|++|+
T Consensus 106 ~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~-~L~~L~Ls~N~l~~-lp~----~l~~L~~L~Ls~N~ 171 (571)
T 3cvr_A 106 DACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPA-LLEYINADNNQLTM-LPE----LPTSLEVLSVRNNQ 171 (571)
T ss_dssp ECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCT-TCCEEECCSSCCSC-CCC----CCTTCCEEECCSSC
T ss_pred EccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCc-cccEEeCCCCccCc-CCC----cCCCcCEEECCCCC
Confidence 999999985 777 665 89999999999884 555 222 22555555555553 443 34455555555555
Q ss_pred ccccCCccccCCCCCcEEEccCCcccccCCccccccCCc-------cEEEeeCCcCCccCchhhhccCCCcEeeeccccc
Q 002214 167 FKGPIPNNLWHCKELSSVSLSYNQFTGRLPRDLGNSTKL-------KSLDLGFNNLNGEIPQEIGNLRNLEILGIDQSNL 239 (952)
Q Consensus 167 l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L-------~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~~ 239 (952)
+++ +|. |. ++|+.|+|++|+|+ .+|. |.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|++
T Consensus 172 L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l 242 (571)
T 3cvr_A 172 LTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPL 242 (571)
T ss_dssp CSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSC
T ss_pred CCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcC
Confidence 553 444 33 55555555555555 3333 332 44 55555555555 3444444455555555555555
Q ss_pred cccCCcccc
Q 002214 240 VGFVPDTIF 248 (952)
Q Consensus 240 ~~~~~~~~~ 248 (952)
.+..|..+.
T Consensus 243 ~~~~p~~l~ 251 (571)
T 3cvr_A 243 SSRIRESLS 251 (571)
T ss_dssp CHHHHHHHH
T ss_pred CCcCHHHHH
Confidence 444444443
No 353
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.84 E-value=1.1e-20 Score=192.46 Aligned_cols=174 Identities=23% Similarity=0.262 Sum_probs=105.6
Q ss_pred cEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCccCCCCCCcEEecccc
Q 002214 353 TTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLRILSLSSN 432 (952)
Q Consensus 353 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 432 (952)
+.++.+++.++. +|..+ .++|++|++++|.+++..+..|..++ +|++|++++|
T Consensus 10 ~~v~c~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~------------------------~L~~L~l~~n 62 (208)
T 2o6s_A 10 TTVECYSQGRTS-VPTGI--PAQTTYLDLETNSLKSLPNGVFDELT------------------------SLTQLYLGGN 62 (208)
T ss_dssp TEEECCSSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCT------------------------TCSEEECCSS
T ss_pred CEEEecCCCccC-CCCCC--CCCCcEEEcCCCccCcCChhhhcccc------------------------cCcEEECCCC
Confidence 455666666653 23222 24566666666666544444444444 4444444444
Q ss_pred ccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEccCccccCcccc
Q 002214 433 ELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNKLQGPIPE 512 (952)
Q Consensus 433 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 512 (952)
+++++.+..|..+++|++|++++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|++++..+.
T Consensus 63 ~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 142 (208)
T 2o6s_A 63 KLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDG 142 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred ccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHH
Confidence 44444444445555555555555555544444455666666666666666655566667777777777777777766666
Q ss_pred cccccccccEEeCCCCcccccCccchhcccccccccccccccccCCCC
Q 002214 513 SFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFNKLVGEIPR 560 (952)
Q Consensus 513 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~ 560 (952)
.|..+++|+.|+|++|.+.+ .+++|++|+++.|.++|.+|.
T Consensus 143 ~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~ 183 (208)
T 2o6s_A 143 VFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRN 183 (208)
T ss_dssp TTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBC
T ss_pred HhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeec
Confidence 67777777777777777654 345677788888888887775
No 354
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.84 E-value=7.8e-21 Score=211.22 Aligned_cols=180 Identities=26% Similarity=0.256 Sum_probs=105.1
Q ss_pred cEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCcccc-CCCcceEEEeccccccccCCCccCCCCCCcEEeccc
Q 002214 353 TTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEFC-HFSRLYVVYLNRNKLSGSIPSCLGDLNSLRILSLSS 431 (952)
Q Consensus 353 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 431 (952)
+.+++++|+++. +|..+. +.++.|+|++|.|++..+..|. .+++|+.|+|++|+|++..+..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 466666666663 333332 3456666666666655555554 455555555555555544444444555555555555
Q ss_pred cccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEccCccccCccc
Q 002214 432 NELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNKLQGPIP 511 (952)
Q Consensus 432 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 511 (952)
|+|+++ .+..|.++++|+.|+|++|+|+++.+..|.++++|+.|+|++|+|++..+
T Consensus 98 N~l~~~------------------------~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~ 153 (361)
T 2xot_A 98 NHLHTL------------------------DEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPV 153 (361)
T ss_dssp SCCCEE------------------------CTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCG
T ss_pred CcCCcC------------------------CHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCH
Confidence 554444 44445555555556666666655556666666666666666666665444
Q ss_pred ccc---cccccccEEeCCCCcccccCccchhcccc--cccccccccccccCCC
Q 002214 512 ESF---GELVSLEFLDLSNNDLSGVIPASLEKLLY--LKSLNLSFNKLVGEIP 559 (952)
Q Consensus 512 ~~~---~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~--L~~L~l~~N~l~~~~p 559 (952)
..| ..+++|+.|+|++|+|+++.+..+..++. |+.|+|++|+|.|.+.
T Consensus 154 ~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~ 206 (361)
T 2xot_A 154 ELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECDCK 206 (361)
T ss_dssp GGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECCHH
T ss_pred HHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCCcC
Confidence 444 45677777777777777666666666666 3677777777777654
No 355
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.83 E-value=2e-20 Score=190.64 Aligned_cols=165 Identities=23% Similarity=0.240 Sum_probs=127.4
Q ss_pred CCCcccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCccCCCCCCcEE
Q 002214 348 NLINLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLRIL 427 (952)
Q Consensus 348 ~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 427 (952)
-.++|++|++++|++++..+..|..+++|++|++++|+++++.+..|..+++|++|+|++|++++..+..|..+++|++|
T Consensus 26 ~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 105 (208)
T 2o6s_A 26 IPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKEL 105 (208)
T ss_dssp CCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEE
Confidence 35689999999999998888889999999999999999998777778888888888888888887766777888888888
Q ss_pred eccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEccCcccc
Q 002214 428 SLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNKLQ 507 (952)
Q Consensus 428 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 507 (952)
++++|+++++.+..|..+++|+.|++++|++++..+..|..+++|+.|+|++|.+.+ .+++|++|+++.|+++
T Consensus 106 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~ 178 (208)
T 2o6s_A 106 ALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHS 178 (208)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCT
T ss_pred EcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCC
Confidence 888888887777777777777777777777776555556666667777777666552 3455666666666666
Q ss_pred Cccccccccccc
Q 002214 508 GPIPESFGELVS 519 (952)
Q Consensus 508 ~~~~~~~~~l~~ 519 (952)
|.+|..++.++.
T Consensus 179 g~ip~~~~~l~~ 190 (208)
T 2o6s_A 179 GVVRNSAGSVAP 190 (208)
T ss_dssp TTBBCTTSSBCT
T ss_pred ceeeccCccccC
Confidence 666666555543
No 356
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.82 E-value=9.7e-20 Score=211.70 Aligned_cols=182 Identities=24% Similarity=0.289 Sum_probs=141.5
Q ss_pred cccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCccCCCCCCcEEecc
Q 002214 351 NLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLRILSLS 430 (952)
Q Consensus 351 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 430 (952)
+|+.|+|++|++++ +|..+ +++|++|+|++|.|+ .+| ..+++|+.|+|++|+|++ +|. +.. +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 78889999988886 45444 378899999999888 445 446888899999998886 566 555 88999999
Q ss_pred ccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEccCccccCcc
Q 002214 431 SNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNKLQGPI 510 (952)
Q Consensus 431 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 510 (952)
+|+|+++++ .+++|+.|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. |. ++|+.|+|++|+|+ .+
T Consensus 129 ~N~l~~lp~----~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~l 195 (571)
T 3cvr_A 129 NNQLTMLPE----LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SL 195 (571)
T ss_dssp SSCCSCCCC----CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SC
T ss_pred CCcCCCCCC----cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-ch
Confidence 999887443 57888999999999886 554 57788899999999886 555 65 88999999999888 45
Q ss_pred cccccccccc-------cEEeCCCCcccccCccchhcccccccccccccccccCCCC
Q 002214 511 PESFGELVSL-------EFLDLSNNDLSGVIPASLEKLLYLKSLNLSFNKLVGEIPR 560 (952)
Q Consensus 511 ~~~~~~l~~L-------~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~ 560 (952)
|. |.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|++++.+|.
T Consensus 196 p~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~ 248 (571)
T 3cvr_A 196 PA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRE 248 (571)
T ss_dssp CC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHH
T ss_pred hh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHH
Confidence 55 554 67 88999999988 4677777788999999999998887764
No 357
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.81 E-value=1.2e-19 Score=187.43 Aligned_cols=137 Identities=24% Similarity=0.266 Sum_probs=91.3
Q ss_pred CCCcEEeccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEc
Q 002214 422 NSLRILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSL 501 (952)
Q Consensus 422 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 501 (952)
++|++|+|++|+|+++.+..|..+++|+.|+|++|+|+...+..|..+++|+.|+|++|+|+++.+..|..+++|+.|+|
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 119 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEec
Confidence 45556666666665555555666666666666666665444455566666666666666666666666677777777777
Q ss_pred cCccccCcccccccccccccEEeCCCCcccccCccchhcccccccccccccccccCCC
Q 002214 502 EHNKLQGPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFNKLVGEIP 559 (952)
Q Consensus 502 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 559 (952)
++|+|+ .+|..+..+++|+.|+|++|+|++..+..|..+++|+.|++++|++.|.++
T Consensus 120 s~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 120 CCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred cCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 777777 556667777777777777777776666667777777777777777777665
No 358
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.81 E-value=1.3e-19 Score=194.71 Aligned_cols=172 Identities=23% Similarity=0.373 Sum_probs=113.5
Q ss_pred ccCCCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCccCCCCCCcEEeccccccCCcCCccccCCCCCce
Q 002214 371 GRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLRILSLSSNELTSVIPSTFWNLEDILG 450 (952)
Q Consensus 371 ~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 450 (952)
..+++|+.|++++|.+... + .+..+++|+.|+|++|++++..+ +..+++|++|++++|++++.. .+..+++|+.
T Consensus 43 ~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~--~l~~l~~L~~ 116 (291)
T 1h6t_A 43 NELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDLS--SLKDLKKLKS 116 (291)
T ss_dssp HHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCGG--GGTTCTTCCE
T ss_pred hhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCCCh--hhccCCCCCE
Confidence 4455566666666665533 2 35556666666666666654333 566666666666666666532 3666667777
Q ss_pred eEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEccCccccCcccccccccccccEEeCCCCcc
Q 002214 451 FDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNKLQGPIPESFGELVSLEFLDLSNNDL 530 (952)
Q Consensus 451 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 530 (952)
|++++|++++. ..+..+++|+.|++++|++++. ..+..+++|+.|+|++|++++..+ +..+++|+.|+|++|.|
T Consensus 117 L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i 190 (291)
T 1h6t_A 117 LSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHI 190 (291)
T ss_dssp EECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred EECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcC
Confidence 77777776643 3566777777777777777754 567777778888888887776544 77777888888888877
Q ss_pred cccCccchhccccccccccccccccc
Q 002214 531 SGVIPASLEKLLYLKSLNLSFNKLVG 556 (952)
Q Consensus 531 ~~~~~~~~~~l~~L~~L~l~~N~l~~ 556 (952)
++. | .+..+++|+.|++++|+++.
T Consensus 191 ~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 191 SDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred CCC-h-hhccCCCCCEEECcCCcccC
Confidence 753 3 37777788888888887765
No 359
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.81 E-value=1.1e-19 Score=195.29 Aligned_cols=181 Identities=20% Similarity=0.341 Sum_probs=157.7
Q ss_pred ccCCCcccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCccCCCCCCc
Q 002214 346 IGNLINLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLR 425 (952)
Q Consensus 346 ~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 425 (952)
+..+++|+.|++++|.++.. + .+..+++|++|++++|++++..+ +..+++|+.|++++|++++ ++ .+..+++|+
T Consensus 42 ~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~ 115 (291)
T 1h6t_A 42 QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLK 115 (291)
T ss_dssp HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCC
T ss_pred hhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCC
Confidence 45678899999999999855 3 48899999999999999997655 9999999999999999985 33 489999999
Q ss_pred EEeccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEccCcc
Q 002214 426 ILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNK 505 (952)
Q Consensus 426 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 505 (952)
+|++++|+++++ ..+..+++|+.|++++|++++. ..+..+++|+.|+|++|++++..+ +..+++|+.|+|++|+
T Consensus 116 ~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~ 189 (291)
T 1h6t_A 116 SLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNH 189 (291)
T ss_dssp EEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCc
Confidence 999999999975 5688999999999999999965 679999999999999999997655 9999999999999999
Q ss_pred ccCcccccccccccccEEeCCCCcccccCccchhc
Q 002214 506 LQGPIPESFGELVSLEFLDLSNNDLSGVIPASLEK 540 (952)
Q Consensus 506 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 540 (952)
|++. + .+..+++|+.|++++|+++......+..
T Consensus 190 i~~l-~-~l~~l~~L~~L~l~~n~i~~~~~~~~~~ 222 (291)
T 1h6t_A 190 ISDL-R-ALAGLKNLDVLELFSQECLNKPINHQSN 222 (291)
T ss_dssp CCBC-G-GGTTCTTCSEEEEEEEEEECCCEECCSE
T ss_pred CCCC-h-hhccCCCCCEEECcCCcccCCccccccc
Confidence 9964 4 4999999999999999998644443333
No 360
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.80 E-value=1.1e-19 Score=201.83 Aligned_cols=180 Identities=24% Similarity=0.185 Sum_probs=139.5
Q ss_pred cccccccCcceeechhhHHHHHHHhhccccccccCCCcccEEEccCCCCCCCCCcccc-cCCCCcEEEccCccccCCCCc
Q 002214 314 LKRLGLERNYLTFSTSELMSLFSALVNCKSLKIGNLINLTTLSLGDNNLSGSLPITLG-RLKKLQGLDLQNNKFEGPIPQ 392 (952)
Q Consensus 314 L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~-~l~~L~~L~L~~N~i~~~~~~ 392 (952)
-+.++++++.++.+|.. -...++.|+|++|+|++..+..|. .+++|++|+|++|+|+++.+.
T Consensus 20 ~~~l~c~~~~l~~iP~~-----------------~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~ 82 (361)
T 2xot_A 20 SNILSCSKQQLPNVPQS-----------------LPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSE 82 (361)
T ss_dssp TTEEECCSSCCSSCCSS-----------------CCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTT
T ss_pred CCEEEeCCCCcCccCcc-----------------CCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChh
Confidence 47889999988877753 234689999999999988888888 999999999999999999999
Q ss_pred cccCCCcceEEEeccccccccCCCccCCCCCCcEEeccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhccccc
Q 002214 393 EFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLRILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAV 472 (952)
Q Consensus 393 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 472 (952)
.|.++++|++|+|++|+|++..+..|.++++|+.|+|++|+|+++.+..|..+++|+.|+|++|+|+...+..|..
T Consensus 83 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~---- 158 (361)
T 2xot_A 83 AFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKD---- 158 (361)
T ss_dssp TTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC-----
T ss_pred hccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcC----
Confidence 9999999999999999999888888999999999999999999888888888888888877777777533333311
Q ss_pred ceeecCCcccCCCCcccccCCCCCceEEccCccccCccccccccccc--ccEEeCCCCccc
Q 002214 473 VDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNKLQGPIPESFGELVS--LEFLDLSNNDLS 531 (952)
Q Consensus 473 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~--L~~L~Ls~N~l~ 531 (952)
+..+++|+.|+|++|+|++..+..|..++. |+.|+|++|++.
T Consensus 159 -----------------~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 159 -----------------GNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp --------------------CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred -----------------cccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 033555555555555555444445555554 356666666665
No 361
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.80 E-value=3.2e-19 Score=183.02 Aligned_cols=153 Identities=24% Similarity=0.328 Sum_probs=90.6
Q ss_pred cEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCccCCCCCCcEEecccc
Q 002214 353 TTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLRILSLSSN 432 (952)
Q Consensus 353 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 432 (952)
+.++++++.++. +|..+. ++|+.|++++|.|+++.+..|..+++|+.|+|++|+|++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~~-iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLTE-IPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCSS-CCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcCc-CCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 456666666663 333332 45666666666666555555555555555555555555444455555555555555555
Q ss_pred ccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEccCccccCcccc
Q 002214 433 ELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNKLQGPIPE 512 (952)
Q Consensus 433 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 512 (952)
+|++++ +..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+.
T Consensus 91 ~l~~l~------------------------~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 146 (220)
T 2v9t_B 91 KITELP------------------------KSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKG 146 (220)
T ss_dssp CCCCCC------------------------TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred cCCccC------------------------HhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHH
Confidence 554443 44455555566666666666656666666677777777777777766666
Q ss_pred cccccccccEEeCCCCcccc
Q 002214 513 SFGELVSLEFLDLSNNDLSG 532 (952)
Q Consensus 513 ~~~~l~~L~~L~Ls~N~l~~ 532 (952)
.|..+++|+.|+|++|++..
T Consensus 147 ~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 147 TFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp TTTTCTTCCEEECCSSCEEC
T ss_pred HHhCCCCCCEEEeCCCCcCC
Confidence 67777777777777777653
No 362
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.80 E-value=3.7e-19 Score=183.89 Aligned_cols=163 Identities=25% Similarity=0.299 Sum_probs=132.4
Q ss_pred cCCCCCCCCCceEEEeCCCCeEEEEEecCCCCcccCCccccCCcccCeeeccccccccccCCCcCCcCCCcEEeCcCCcc
Q 002214 14 WTSNASVCSWMGITCDVYGNRVTSLTISDLGLAGTIPSHLGNLSSLQTLVLSRNWFSGTIPKEIGNLTKLKELHLDYNKL 93 (952)
Q Consensus 14 ~~~~~~~c~w~~v~c~~~~~~~~~l~l~~~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l 93 (952)
|...+..|.|.+|.|.. ++++ .+|..+. ++|++|+|++|.|++..|..+..+++|++|+|++|++
T Consensus 12 ~~~~~~~Cs~~~v~c~~------------~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l 76 (229)
T 3e6j_A 12 ACPSQCSCSGTTVDCRS------------KRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQL 76 (229)
T ss_dssp CCCTTCEEETTEEECTT------------SCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred cCCCCCEEeCCEeEccC------------CCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCC
Confidence 44457899998888863 3343 5676554 8999999999999988888999999999999999999
Q ss_pred cccCChhhcCCCCCCeEeecCccCccccCcccccccccccceeeccccccccCCCCCCCCCCccceEEcccCcccccCCc
Q 002214 94 QGEIPEELGNLAELEMLVLNNNLLTGTIPASIFNLSFISTALDFSDNSLTGSFPYDMCPGLPRLKGLYVSYNQFKGPIPN 173 (952)
Q Consensus 94 ~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~l~~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 173 (952)
....+..|.++++|++|+|++|+++ .++...+..+++|++|+|++|+++ .+|.
T Consensus 77 ~~i~~~~~~~l~~L~~L~Ls~N~l~--------------------------~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~ 129 (229)
T 3e6j_A 77 GALPVGVFDSLTQLTVLDLGTNQLT--------------------------VLPSAVFDRLVHLKELFMCCNKLT-ELPR 129 (229)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCC--------------------------CCCTTTTTTCTTCCEEECCSSCCC-SCCT
T ss_pred CCcChhhcccCCCcCEEECCCCcCC--------------------------ccChhHhCcchhhCeEeccCCccc-ccCc
Confidence 8655677899999999999999887 233344456788999999999988 6788
Q ss_pred cccCCCCCcEEEccCCcccccCCccccccCCccEEEeeCCcCCcc
Q 002214 174 NLWHCKELSSVSLSYNQFTGRLPRDLGNSTKLKSLDLGFNNLNGE 218 (952)
Q Consensus 174 ~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 218 (952)
.+..+++|+.|+|++|+|++..+..|..+++|+.|+|++|.+...
T Consensus 130 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 130 GIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp TGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTT
T ss_pred ccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCC
Confidence 888888899999999988877777788888888888888888743
No 363
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.79 E-value=4.5e-19 Score=181.91 Aligned_cols=133 Identities=23% Similarity=0.298 Sum_probs=89.1
Q ss_pred eEEEeccccccccCC-CccCCCCCCcEEeccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCC
Q 002214 401 YVVYLNRNKLSGSIP-SCLGDLNSLRILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSR 479 (952)
Q Consensus 401 ~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 479 (952)
+.|+|++|+|++..+ ..|..+++|++|+|++|+|+++.+..|..+++|+.|+|++|++++..+..|..+++|++|+|++
T Consensus 35 ~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 114 (220)
T 2v70_A 35 AELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRS 114 (220)
T ss_dssp SEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTT
T ss_pred CEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCC
Confidence 334444444443322 2345555666666666666655555666666666666666666655666667777777777777
Q ss_pred cccCCCCcccccCCCCCceEEccCccccCcccccccccccccEEeCCCCccccc
Q 002214 480 NNLSGNIPSTIIGLKNLQHLSLEHNKLQGPIPESFGELVSLEFLDLSNNDLSGV 533 (952)
Q Consensus 480 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 533 (952)
|+|+++.|..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|++...
T Consensus 115 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 115 NRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp SCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred CcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 777777777778888888888888888877777888888888888888888754
No 364
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.79 E-value=2.1e-19 Score=211.53 Aligned_cols=172 Identities=24% Similarity=0.380 Sum_probs=78.0
Q ss_pred ccCCCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCccCCCCCCcEEeccccccCCcCCccccCCCCCce
Q 002214 371 GRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLRILSLSSNELTSVIPSTFWNLEDILG 450 (952)
Q Consensus 371 ~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 450 (952)
..+++|+.|++++|.|... + .|..+++|+.|+|++|+|++..+ +..+++|+.|+|++|+|+++ ..+..+++|+.
T Consensus 40 ~~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~ 113 (605)
T 1m9s_A 40 NELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKDL--SSLKDLKKLKS 113 (605)
T ss_dssp HHHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCC--TTSTTCTTCCE
T ss_pred hcCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCCC--hhhccCCCCCE
Confidence 3344444444444444322 1 24444444444444444443322 44444444444444444432 13444444444
Q ss_pred eEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEccCccccCcccccccccccccEEeCCCCcc
Q 002214 451 FDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNKLQGPIPESFGELVSLEFLDLSNNDL 530 (952)
Q Consensus 451 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 530 (952)
|+|++|++++. ..+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|+|++..| +..+++|+.|+|++|+|
T Consensus 114 L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i 187 (605)
T 1m9s_A 114 LSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHI 187 (605)
T ss_dssp EECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred EEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCC
Confidence 44444444431 2344444555555555554432 344445555555555555544333 44455555555555555
Q ss_pred cccCccchhccccccccccccccccc
Q 002214 531 SGVIPASLEKLLYLKSLNLSFNKLVG 556 (952)
Q Consensus 531 ~~~~~~~~~~l~~L~~L~l~~N~l~~ 556 (952)
++. ..+..+++|+.|+|++|++++
T Consensus 188 ~~l--~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 188 SDL--RALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp CBC--GGGTTCTTCSEEECCSEEEEC
T ss_pred CCC--hHHccCCCCCEEEccCCcCcC
Confidence 432 234445555555555555443
No 365
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.78 E-value=5.2e-19 Score=208.09 Aligned_cols=188 Identities=20% Similarity=0.342 Sum_probs=162.1
Q ss_pred ccCCCcccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCccCCCCCCc
Q 002214 346 IGNLINLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLR 425 (952)
Q Consensus 346 ~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 425 (952)
+..+++|+.|++++|.+... + .+..+++|+.|+|++|.|.+..+ +..+++|+.|+|++|+|++ ++ .+..+++|+
T Consensus 39 ~~~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~ 112 (605)
T 1m9s_A 39 QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLK 112 (605)
T ss_dssp HHHHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCC
T ss_pred hhcCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCC
Confidence 35678899999999999854 3 58999999999999999987655 8999999999999999985 33 689999999
Q ss_pred EEeccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEccCcc
Q 002214 426 ILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNK 505 (952)
Q Consensus 426 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 505 (952)
.|+|++|+|+++ ..+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|+|++..| +..+++|+.|+|++|+
T Consensus 113 ~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~ 186 (605)
T 1m9s_A 113 SLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNH 186 (605)
T ss_dssp EEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCC
Confidence 999999999975 4688999999999999999965 678999999999999999997766 8999999999999999
Q ss_pred ccCcccccccccccccEEeCCCCcccccCccchhcccccccc
Q 002214 506 LQGPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSL 547 (952)
Q Consensus 506 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 547 (952)
|++. ..+..+++|+.|+|++|++++.....+..+..+..+
T Consensus 187 i~~l--~~l~~l~~L~~L~L~~N~l~~~p~~~~~~l~~~~~l 226 (605)
T 1m9s_A 187 ISDL--RALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTV 226 (605)
T ss_dssp CCBC--GGGTTCTTCSEEECCSEEEECCCCCCCSSCEEECCC
T ss_pred CCCC--hHHccCCCCCEEEccCCcCcCCcccccccEEecccc
Confidence 9964 469999999999999999987655555555555444
No 366
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.78 E-value=3e-21 Score=225.89 Aligned_cols=207 Identities=18% Similarity=0.166 Sum_probs=152.8
Q ss_pred ccCCcccCeeeccccccccccCCCcCCcCCCcEEeCcCCc-------------ccccCChhhcCCCCCCeEe-ecCccCc
Q 002214 53 LGNLSSLQTLVLSRNWFSGTIPKEIGNLTKLKELHLDYNK-------------LQGEIPEELGNLAELEMLV-LNNNLLT 118 (952)
Q Consensus 53 l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~-------------l~~~~p~~l~~l~~L~~L~-L~~n~l~ 118 (952)
+..+++|+.|+|++|+++ .+|++|+.+++|++|++++|. +.+..|..++++++|+.|+ ++.|.+.
T Consensus 345 ~~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~ 423 (567)
T 1dce_A 345 SATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD 423 (567)
T ss_dssp CSTTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH
T ss_pred cccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc
Confidence 367888999999999997 889999999999999987775 4456677778888888887 6666554
Q ss_pred cccCcccccccccccceeeccccccccCCCCCCCCCCccceEEcccCcccccCCccccCCCCCcEEEccCCcccccCCcc
Q 002214 119 GTIPASIFNLSFISTALDFSDNSLTGSFPYDMCPGLPRLKGLYVSYNQFKGPIPNNLWHCKELSSVSLSYNQFTGRLPRD 198 (952)
Q Consensus 119 ~~~p~~~~~l~~l~~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~ 198 (952)
. +..+.+++|.++. +|. ..|+.|+|++|++++ +|. |..+++|+.|+|++|+|+ .+|..
T Consensus 424 -~-----------L~~l~l~~n~i~~-l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~ 481 (567)
T 1dce_A 424 -D-----------LRSKFLLENSVLK-MEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPA 481 (567)
T ss_dssp -H-----------HHHHHHHHHHHHH-HHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGG
T ss_pred -h-----------hhhhhhhcccccc-cCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchh
Confidence 1 1345566666652 221 247788888888875 565 888888888888888888 67778
Q ss_pred ccccCCccEEEeeCCcCCccCchhhhccCCCcEeeeccccccccC-CccccCCCCccEEEeeCccccccCCCCcc-cCCC
Q 002214 199 LGNSTKLKSLDLGFNNLNGEIPQEIGNLRNLEILGIDQSNLVGFV-PDTIFNISTLKILSLFNNTLSGNLPSSKN-LIGL 276 (952)
Q Consensus 199 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~~~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-l~~l 276 (952)
|+++++|++|+|++|+|++ +| .|+.+++|+.|+|++|++.+.. |..+..+++|+.|+|++|++++..+.... +..+
T Consensus 482 ~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~l 559 (567)
T 1dce_A 482 LAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEML 559 (567)
T ss_dssp GGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHC
T ss_pred hhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHC
Confidence 8888888888888888875 56 7888888888888888888776 77888888888888888888765543322 2236
Q ss_pred CCcceEEc
Q 002214 277 PNLEGLNL 284 (952)
Q Consensus 277 ~~L~~L~L 284 (952)
++|+.|++
T Consensus 560 p~L~~L~l 567 (567)
T 1dce_A 560 PSVSSILT 567 (567)
T ss_dssp TTCSEEEC
T ss_pred cccCccCC
Confidence 66766653
No 367
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.76 E-value=5e-19 Score=177.45 Aligned_cols=129 Identities=26% Similarity=0.356 Sum_probs=72.7
Q ss_pred eEEEeccccccccCCCccCCCCCCcEEeccccccCCcCCc-cccCCCCCceeEecCCccCCCCchhhhcccccceeecCC
Q 002214 401 YVVYLNRNKLSGSIPSCLGDLNSLRILSLSSNELTSVIPS-TFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSR 479 (952)
Q Consensus 401 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 479 (952)
+.+++++|.++ .+|..+.. +|++|++++|+|+++.+. .|..+++|+.|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 45666666665 44443322 566666666666655543 355556666666666655555555555555555555555
Q ss_pred cccCCCCcccccCCCCCceEEccCccccCcccccccccccccEEeCCCCcccc
Q 002214 480 NNLSGNIPSTIIGLKNLQHLSLEHNKLQGPIPESFGELVSLEFLDLSNNDLSG 532 (952)
Q Consensus 480 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 532 (952)
|+|++..+..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|++++
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 140 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNC 140 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCC
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccC
Confidence 55555555555555555555555555555555555555555555555555554
No 368
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.76 E-value=1.1e-20 Score=220.95 Aligned_cols=204 Identities=23% Similarity=0.223 Sum_probs=137.5
Q ss_pred cccCccccccccCcceeechhhHHHHHHHhhccccccccCCCcccEEEccCCC-------------CCCCCCcccccCCC
Q 002214 309 GYNSNLKRLGLERNYLTFSTSELMSLFSALVNCKSLKIGNLINLTTLSLGDNN-------------LSGSLPITLGRLKK 375 (952)
Q Consensus 309 ~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~-------------l~~~~~~~l~~l~~ 375 (952)
..+++|+.|+|+.|.++.+|.+ ++.+++|+.|++++|. +.+..|..+..+++
T Consensus 346 ~~~~~L~~L~Ls~n~L~~Lp~~---------------i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~ 410 (567)
T 1dce_A 346 ATDEQLFRCELSVEKSTVLQSE---------------LESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFST 410 (567)
T ss_dssp STTTTSSSCCCCHHHHHHHHHH---------------HHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHH
T ss_pred ccCccceeccCChhhHHhhHHH---------------HHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHh
Confidence 3445555566666655554443 2334445555554432 34456667777777
Q ss_pred CcEEE-ccCccccCCCCccccCCCcceEEEeccccccccCCCccCCCCCCcEEeccccccCCcCCccccCCCCCceeEec
Q 002214 376 LQGLD-LQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLRILSLSSNELTSVIPSTFWNLEDILGFDFS 454 (952)
Q Consensus 376 L~~L~-L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 454 (952)
|+.|+ ++.|.+. +|..+.+++|.++...+ ..|+.|+|++|+|+++ |. |..+++|+.|+|+
T Consensus 411 L~~L~~l~~n~~~-----------~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~l-p~-~~~l~~L~~L~Ls 471 (567)
T 1dce_A 411 LKAVDPMRAAYLD-----------DLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTVL-CH-LEQLLLVTHLDLS 471 (567)
T ss_dssp HHHHCGGGHHHHH-----------HHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSSC-CC-GGGGTTCCEEECC
T ss_pred cccCcchhhcccc-----------hhhhhhhhcccccccCc------cCceEEEecCCCCCCC-cC-ccccccCcEeecC
Confidence 77777 6666542 34555666777764322 2478888888888764 44 7888888888888
Q ss_pred CCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEccCccccCcc-cccccccccccEEeCCCCccccc
Q 002214 455 SNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNKLQGPI-PESFGELVSLEFLDLSNNDLSGV 533 (952)
Q Consensus 455 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~ 533 (952)
+|+|+ .+|..+..+++|+.|+|++|+|++ +| .|+.+++|+.|+|++|+|++.. |..++.+++|+.|+|++|+|++.
T Consensus 472 ~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~ 548 (567)
T 1dce_A 472 HNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQE 548 (567)
T ss_dssp SSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGS
T ss_pred ccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCC
Confidence 88888 677788888888888888888885 45 7788888888888888888765 77888888888888888888765
Q ss_pred Cccc---hhcccccccccc
Q 002214 534 IPAS---LEKLLYLKSLNL 549 (952)
Q Consensus 534 ~~~~---~~~l~~L~~L~l 549 (952)
+|.. +..+++|+.|++
T Consensus 549 ~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 549 EGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp SSCTTHHHHHCTTCSEEEC
T ss_pred ccHHHHHHHHCcccCccCC
Confidence 5432 334677777753
No 369
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.76 E-value=5.7e-19 Score=186.46 Aligned_cols=170 Identities=28% Similarity=0.381 Sum_probs=98.6
Q ss_pred CCcccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCccCCCCCCcEEe
Q 002214 349 LINLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLRILS 428 (952)
Q Consensus 349 l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 428 (952)
+.++..+++++|.+++.. .+..+++|++|++++|.|+.. + .+..+++|+.|+|++|+|++..+ +..+++|++|+
T Consensus 18 l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~ 91 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQSL-A-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEE
T ss_pred HHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcccc-h-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEE
Confidence 445666777777777433 567778888888888887743 3 56677777777777777774443 66777777777
Q ss_pred ccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEccCccccC
Q 002214 429 LSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNKLQG 508 (952)
Q Consensus 429 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 508 (952)
+++|+++++.+... ++|+.|++++|++++ . ..+..+++|+.|+|++|+|++
T Consensus 92 L~~N~l~~l~~~~~---~~L~~L~L~~N~l~~------------------------~--~~l~~l~~L~~L~Ls~N~i~~ 142 (263)
T 1xeu_A 92 VNRNRLKNLNGIPS---ACLSRLFLDNNELRD------------------------T--DSLIHLKNLEILSIRNNKLKS 142 (263)
T ss_dssp CCSSCCSCCTTCCC---SSCCEEECCSSCCSB------------------------S--GGGTTCTTCCEEECTTSCCCB
T ss_pred CCCCccCCcCcccc---CcccEEEccCCccCC------------------------C--hhhcCcccccEEECCCCcCCC
Confidence 77777765432211 455555555555543 2 124445555555555555543
Q ss_pred cccccccccccccEEeCCCCcccccCccchhcccccccccccccccccC
Q 002214 509 PIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFNKLVGE 557 (952)
Q Consensus 509 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 557 (952)
. + .+..+++|+.|+|++|+|++. ..+..+++|+.|++++|++++.
T Consensus 143 ~-~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 143 I-V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp C-G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred C-h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 2 2 344555555555555555543 3445555555555555555543
No 370
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.76 E-value=3.9e-19 Score=187.20 Aligned_cols=137 Identities=20% Similarity=0.266 Sum_probs=107.3
Q ss_pred cCCccceecCccceEEEEEEe-CCCcE--EEEEEeeccCch------------------------hhHHHHHHHHHHHhC
Q 002214 665 QFSEENLIGIGSYGSVYKGRF-PDGIE--VAIKVFHLQREG------------------------ALNSFDAECEILKTI 717 (952)
Q Consensus 665 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l 717 (952)
-|.+.+.||+|+||.||+|.+ .+|+. ||||+++..... ....+.+|+.++.++
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 367889999999999999998 68989 999987543111 113678999999999
Q ss_pred CCCcc--ceeeeEeecCCeeEEEEEccCC-C----ChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcC-CCCeEeCC
Q 002214 718 RHRNL--VKIISSCTNHNFKALVLEYMPK-G----SLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGH-SNPIVHCD 789 (952)
Q Consensus 718 ~h~ni--v~l~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h-~~~ivH~D 789 (952)
+|+++ ..++++ +..++||||+.+ | +|.+.... .++..+..++.|++.|++|| | +.||+|||
T Consensus 128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~l---H~~~givHrD 196 (258)
T 1zth_A 128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRL---YQEAELVHAD 196 (258)
T ss_dssp HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHH---HHTSCEECSS
T ss_pred HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHH---HHHCCEEeCC
Confidence 88764 333432 356899999942 4 66665432 23456788999999999999 7 89999999
Q ss_pred CCCCCeeeCCCCcEEEecccccccc
Q 002214 790 IKPSNVLLDDSMVAHLSDFGIAKLL 814 (952)
Q Consensus 790 lk~~Nill~~~~~~kl~Dfgla~~~ 814 (952)
|||+|||++. .++|+|||+|...
T Consensus 197 lkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 197 LSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSTTSEEESS--SEEECCCTTCEET
T ss_pred CCHHHEEEcC--cEEEEECcccccC
Confidence 9999999998 9999999999864
No 371
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.74 E-value=4.2e-18 Score=179.82 Aligned_cols=152 Identities=19% Similarity=0.281 Sum_probs=129.8
Q ss_pred ccCCCcccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCccCCCCCCc
Q 002214 346 IGNLINLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLR 425 (952)
Q Consensus 346 ~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 425 (952)
+..+++|+.|++++|+++. ++ .+..+++|++|+|++|+|++..+ |..+++|+.|+|++|++++ +|.. .. ++|+
T Consensus 37 ~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~-~~-~~L~ 109 (263)
T 1xeu_A 37 QKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGI-PS-ACLS 109 (263)
T ss_dssp HHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTC-CC-SSCC
T ss_pred hhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCcc-cc-Cccc
Confidence 4567899999999999995 44 78999999999999999997655 9999999999999999995 4433 33 9999
Q ss_pred EEeccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEccCcc
Q 002214 426 ILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNK 505 (952)
Q Consensus 426 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 505 (952)
+|++++|+++++ ..+..+++|+.|++++|++++. + .+..+++|+.|+|++|++++. ..+..+++|+.|++++|+
T Consensus 110 ~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~ 183 (263)
T 1xeu_A 110 RLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQK 183 (263)
T ss_dssp EEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEE
T ss_pred EEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCc
Confidence 999999999975 3588999999999999999864 3 688889999999999999865 678888899999999998
Q ss_pred ccCcc
Q 002214 506 LQGPI 510 (952)
Q Consensus 506 l~~~~ 510 (952)
+++..
T Consensus 184 ~~~~~ 188 (263)
T 1xeu_A 184 CVNEP 188 (263)
T ss_dssp EECCC
T ss_pred ccCCc
Confidence 88553
No 372
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=5.6e-18 Score=170.67 Aligned_cols=153 Identities=17% Similarity=0.219 Sum_probs=77.2
Q ss_pred ccCCCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCccCCCCCCcEEeccccccCCcCCccccCCCCCce
Q 002214 371 GRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLRILSLSSNELTSVIPSTFWNLEDILG 450 (952)
Q Consensus 371 ~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 450 (952)
..+++|++|++++|.|+ ..| .+..+++|++|++++|.++ . +..+..+++|++|++++|++++..+..|..+++|+.
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~-~-~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT-N-YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS-C-CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC-c-chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 44555555555555555 222 3555555555555555443 1 124455555666666666555544555555555555
Q ss_pred eEecCCccCCCCchhhhcccccceeecCCcc-cCCCCcccccCCCCCceEEccCccccCcccccccccccccEEeCCCCc
Q 002214 451 FDFSSNSLNGSLPLEIENLKAVVDIYLSRNN-LSGNIPSTIIGLKNLQHLSLEHNKLQGPIPESFGELVSLEFLDLSNND 529 (952)
Q Consensus 451 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 529 (952)
|++++|++++..|..+..+++|++|+|++|+ ++ .+| .+..+++|+.|++++|++++ ++ .+..+++|+.|++++|+
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC-
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcc
Confidence 5555555554444555555555555555554 33 222 34555555555555555553 22 44555555555555555
Q ss_pred cc
Q 002214 530 LS 531 (952)
Q Consensus 530 l~ 531 (952)
|.
T Consensus 193 i~ 194 (197)
T 4ezg_A 193 IG 194 (197)
T ss_dssp --
T ss_pred cC
Confidence 43
No 373
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.74 E-value=1.3e-17 Score=167.19 Aligned_cols=155 Identities=26% Similarity=0.303 Sum_probs=107.2
Q ss_pred cEEeccccccCCcCCccccCCCCCceeEecCCccCCCCch-hhhcccccceeecCCcccCCCCcccccCCCCCceEEccC
Q 002214 425 RILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPL-EIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEH 503 (952)
Q Consensus 425 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 503 (952)
+.+++++|+++.++ ..+. .+|+.|++++|+|++..+. .|..+++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~~ip-~~~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLKEIP-RDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCSSCC-SCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcCcCc-cCCC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 67777777776543 3332 2777777777777765553 377777777777777777777777777777777777777
Q ss_pred ccccCcccccccccccccEEeCCCCcccccCccchhcccccccccccccccccCCCCCCCcccccccccccCccCCCCC
Q 002214 504 NKLQGPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFNKLVGEIPRGGAFANFSAESFIGNDLLCGSP 582 (952)
Q Consensus 504 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~p 582 (952)
|+|++..+..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|.|.++......++....+.++...|+.|
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P 166 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCC
Confidence 7777766667777777777777777777777777777777777777777777776643222233333445555666665
No 374
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=7.7e-18 Score=169.67 Aligned_cols=155 Identities=16% Similarity=0.226 Sum_probs=136.6
Q ss_pred ccCCCcccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCccCCCCCCc
Q 002214 346 IGNLINLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLR 425 (952)
Q Consensus 346 ~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 425 (952)
.+.+++|+.|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|++++..+..+..+++|+
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 456789999999999999 445 6899999999999999876 345889999999999999999988899999999999
Q ss_pred EEeccccccCCcCCccccCCCCCceeEecCCc-cCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEccCc
Q 002214 426 ILSLSSNELTSVIPSTFWNLEDILGFDFSSNS-LNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHN 504 (952)
Q Consensus 426 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 504 (952)
+|++++|++++..+..|..+++|+.|++++|+ ++ .+| .+..+++|+.|++++|++++. + .+..+++|+.|++++|
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~N 191 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFSQ 191 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECBC
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeCc
Confidence 99999999998888999999999999999998 66 455 799999999999999999964 3 7899999999999999
Q ss_pred cccC
Q 002214 505 KLQG 508 (952)
Q Consensus 505 ~l~~ 508 (952)
+|.+
T Consensus 192 ~i~~ 195 (197)
T 4ezg_A 192 TIGG 195 (197)
T ss_dssp ----
T ss_pred ccCC
Confidence 9874
No 375
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.73 E-value=4.9e-18 Score=186.12 Aligned_cols=200 Identities=12% Similarity=0.037 Sum_probs=114.0
Q ss_pred ccCCCcccEEEccCCCCCCCCCcccccCCCCcEEEccCcc----ccCCCCccccCCCcce-EEEecccc-ccccCCCccC
Q 002214 346 IGNLINLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNK----FEGPIPQEFCHFSRLY-VVYLNRNK-LSGSIPSCLG 419 (952)
Q Consensus 346 ~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~----i~~~~~~~~~~l~~L~-~L~L~~N~-l~~~~~~~~~ 419 (952)
|.++++|+.|++.+|.+..+.+.+|.++.++..+.+..+. ........|.++..|+ .+.+.... +.........
T Consensus 120 F~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~ 199 (329)
T 3sb4_A 120 FKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGL 199 (329)
T ss_dssp TTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTC
T ss_pred hhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhccc
Confidence 4455666666666666665666666666666655555422 2223344555555555 33333211 0000001111
Q ss_pred CCCCCcEEeccccccCCcCCccc-cCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCc-
Q 002214 420 DLNSLRILSLSSNELTSVIPSTF-WNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQ- 497 (952)
Q Consensus 420 ~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~- 497 (952)
...+++.+.+.++-.. .....+ ..+++|+.|+|++|+++.+.+..|.++++|+.|+|++| ++.+.+.+|.++++|+
T Consensus 200 ~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~ 277 (329)
T 3sb4_A 200 QPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAG 277 (329)
T ss_dssp CGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCE
T ss_pred CccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccE
Confidence 2344455555443211 111111 12566777777776666555666777777777777776 6656667777777777
Q ss_pred eEEccCccccCcccccccccccccEEeCCCCcccccCccchhccccccccc
Q 002214 498 HLSLEHNKLQGPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLN 548 (952)
Q Consensus 498 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 548 (952)
.|++.+ .++.+.+.+|.++++|+.|++++|.++.+.+..|.++++|+.++
T Consensus 278 ~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 278 TLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred EEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 777776 56656667777777777777777777766666777777777665
No 376
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.73 E-value=2.4e-18 Score=188.63 Aligned_cols=123 Identities=15% Similarity=0.062 Sum_probs=64.5
Q ss_pred CCccceEEcccCcccccCCccccC-CCCCcEEEccCCccc--ccCCccccccCCccEEEeeCCcCCccCchhhhc-----
Q 002214 154 LPRLKGLYVSYNQFKGPIPNNLWH-CKELSSVSLSYNQFT--GRLPRDLGNSTKLKSLDLGFNNLNGEIPQEIGN----- 225 (952)
Q Consensus 154 l~~L~~L~L~~n~l~~~~~~~l~~-l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~----- 225 (952)
++++++|.++++- .......+.. +++|+.|+|++|+|. ...+..+ +.++.+.+..|. +.+.+|.+
T Consensus 24 ~~~l~~L~l~g~i-~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~~---I~~~aF~~~~~~~ 96 (329)
T 3sb4_A 24 ANSITHLTLTGKL-NAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMANF---VPAYAFSNVVNGV 96 (329)
T ss_dssp HHHCSEEEEEEEE-CHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTTE---ECTTTTEEEETTE
T ss_pred hCceeEEEEeccc-cHHHHHHHHHhhccCeEEecCcceeEEecCccccc---cccccccccccc---cCHHHhccccccc
Confidence 3456666666531 1111112222 566777777777666 2222222 224455555553 23345555
Q ss_pred ---cCCCcEeeeccccccccCCccccCCCCccEEEeeCccccccCCCCcccCCCCCcceEEccc
Q 002214 226 ---LRNLEILGIDQSNLVGFVPDTIFNISTLKILSLFNNTLSGNLPSSKNLIGLPNLEGLNLGL 286 (952)
Q Consensus 226 ---l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~L~~L~L~~ 286 (952)
+++|+.|+|.+ ++..+.+.+|.++++|+.|++++|.+....+ ..|.++.++..+.+..
T Consensus 97 ~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~--~aF~~~~~l~~l~~~~ 157 (329)
T 3sb4_A 97 TKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLP--EALADSVTAIFIPLGS 157 (329)
T ss_dssp EEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECT--TSSCTTTCEEEECTTC
T ss_pred ccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccch--hhhcCCCceEEecCcc
Confidence 67777777766 6666666666667777777776666653322 2355555555555444
No 377
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.73 E-value=5.1e-18 Score=169.92 Aligned_cols=132 Identities=26% Similarity=0.319 Sum_probs=109.1
Q ss_pred cEEeccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEccCc
Q 002214 425 RILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHN 504 (952)
Q Consensus 425 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 504 (952)
+.+++++|+++.++.. + .++|+.|++++|+|+ .+|..|..+++|+.|+|++|+|+++.+..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~~ip~~-~--~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLKVLPKG-I--PRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCSSCCSC-C--CTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCCcCCCC-C--CCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 4677777777654332 2 246778888888887 56678888888999999999998888888999999999999999
Q ss_pred cccCcccccccccccccEEeCCCCcccccCccchhcccccccccccccccccCCCC
Q 002214 505 KLQGPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFNKLVGEIPR 560 (952)
Q Consensus 505 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~ 560 (952)
+|+++.|..|..+++|+.|+|++|+|+.+.+..|..+++|+.|++++|+|.|.+..
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~l 144 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNM 144 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGGG
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCcC
Confidence 99988888899999999999999999977777889999999999999999987763
No 378
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.71 E-value=3.4e-18 Score=206.49 Aligned_cols=213 Identities=19% Similarity=0.147 Sum_probs=107.5
Q ss_pred ccccccC-CCCCCCCCceEEEeCCCCeEEEEEecCCCCcccCCccccCCcccCee-----eccccccccccCCCcCCcCC
Q 002214 9 ILAQNWT-SNASVCSWMGITCDVYGNRVTSLTISDLGLAGTIPSHLGNLSSLQTL-----VLSRNWFSGTIPKEIGNLTK 82 (952)
Q Consensus 9 ~~~~~~~-~~~~~c~w~~v~c~~~~~~~~~l~l~~~~~~~~~p~~l~~l~~L~~L-----~L~~n~l~~~~p~~l~~l~~ 82 (952)
.-..+|. .++..+.|.++.+.. .+++.|+|.++++.. +|..+....+|..+ +++.|.+. ..|+.+..+++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~s~--~~~~~l~L~~n~~~~-~~~~~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~ 225 (727)
T 4b8c_D 150 AKKQQPTGDSTPSGTATNSAVST--PLTPKIELFANGKDE-ANQALLQHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQL 225 (727)
T ss_dssp TC--------------------------------------------------------------------------CCCC
T ss_pred cccCCCcCCCCccccCCCceecC--CccceEEeeCCCCCc-chhhHhhcCccCcccccCcccccccee-cChhhhccCCC
Confidence 3344563 456789999988885 678999999998875 44443333333322 22233333 45667777788
Q ss_pred CcEEeCcCCcccccCChhhcCCCCCCeEeecCccCccccCcccccccccccceeeccccccccCCCCCCCCCCccceEEc
Q 002214 83 LKELHLDYNKLQGEIPEELGNLAELEMLVLNNNLLTGTIPASIFNLSFISTALDFSDNSLTGSFPYDMCPGLPRLKGLYV 162 (952)
Q Consensus 83 L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~l~~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L 162 (952)
|++|+|++|.+. .+|..+.++++|++|+|++|.|+ .+|..++ ++++|++|+|
T Consensus 226 L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~--------------------------~l~~L~~L~L 277 (727)
T 4b8c_D 226 WHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIK--------------------------NLSNLRVLDL 277 (727)
T ss_dssp CCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGG--------------------------GGTTCCEEEC
T ss_pred CcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhh--------------------------CCCCCCEEeC
Confidence 888888888877 67777777778888888877777 6665554 4557888888
Q ss_pred ccCcccccCCccccCCCCCcEEEccCCcccccCCccccccCCccEEEeeCCcCCccCchhhhccCC-CcEeeeccccccc
Q 002214 163 SYNQFKGPIPNNLWHCKELSSVSLSYNQFTGRLPRDLGNSTKLKSLDLGFNNLNGEIPQEIGNLRN-LEILGIDQSNLVG 241 (952)
Q Consensus 163 ~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~L~~n~~~~ 241 (952)
++|+|+ .+|..|..+++|++|+|++|.|+ .+|..|+.+++|++|+|++|.+++.+|..+..+.. +..|+|++|.+.+
T Consensus 278 s~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~ 355 (727)
T 4b8c_D 278 SHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEI 355 (727)
T ss_dssp TTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred cCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccC
Confidence 888888 67888888888888888888887 66777888888888888888888888887766533 2346788888877
Q ss_pred cCCccccCCCCccEEEeeCc
Q 002214 242 FVPDTIFNISTLKILSLFNN 261 (952)
Q Consensus 242 ~~~~~~~~l~~L~~L~Ls~N 261 (952)
.+|. .|+.|+++.|
T Consensus 356 ~~p~------~l~~l~l~~n 369 (727)
T 4b8c_D 356 PLPH------ERRFIEINTD 369 (727)
T ss_dssp CCCC------C---------
T ss_pred cCcc------ccceeEeecc
Confidence 7665 4556666666
No 379
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.71 E-value=1.6e-18 Score=209.31 Aligned_cols=138 Identities=22% Similarity=0.283 Sum_probs=76.0
Q ss_pred ccCCCcccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCccCCCCCCc
Q 002214 346 IGNLINLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLR 425 (952)
Q Consensus 346 ~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 425 (952)
+..+++|+.|+|++|.+. .+|..+..+++|++|+|++|.|+ .+|..|..+++|++|+|++|+|+ .+|..|+.+++|+
T Consensus 220 ~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~ 296 (727)
T 4b8c_D 220 KYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLK 296 (727)
T ss_dssp --CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCS
T ss_pred hccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCC
Confidence 445556666666666665 34444445666666666666665 45555566666666666666665 4455566666666
Q ss_pred EEeccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccc-cceeecCCcccCCCCc
Q 002214 426 ILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKA-VVDIYLSRNNLSGNIP 487 (952)
Q Consensus 426 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~-L~~L~Ls~N~l~~~~~ 487 (952)
+|+|++|.|+. +|..|..+++|+.|+|++|.|++.+|..+..+.. +..|+|++|.+++.+|
T Consensus 297 ~L~L~~N~l~~-lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p 358 (727)
T 4b8c_D 297 YFYFFDNMVTT-LPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLP 358 (727)
T ss_dssp EEECCSSCCCC-CCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_pred EEECCCCCCCc-cChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCc
Confidence 66666666653 3444556666666666666665555555544322 1234555555554444
No 380
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.67 E-value=1.4e-15 Score=170.14 Aligned_cols=178 Identities=10% Similarity=0.086 Sum_probs=84.5
Q ss_pred cccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCccCCCCCCcEEecc
Q 002214 351 NLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLRILSLS 430 (952)
Q Consensus 351 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 430 (952)
+|+.+.|.+ .++.+...+|.++++|+.+++.+| ++.+...+|.+ .+|+.+.+ .+.++.....+|.++++|+.+.+.
T Consensus 204 ~L~~l~lp~-~l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~ 279 (401)
T 4fdw_A 204 GIEEVLLPV-TLKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTY 279 (401)
T ss_dssp CCSEEECCT-TCCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEE
T ss_pred ccCEEEeCC-chheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeC
Confidence 344444432 244344445555555555555443 33344444444 34444444 222333334444444444444444
Q ss_pred ccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEccCccccCcc
Q 002214 431 SNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNKLQGPI 510 (952)
Q Consensus 431 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 510 (952)
+|.+.. +.+..+.+..|.++++|+.++|. |.++.+...+|.++++|+.++|..| ++.+.
T Consensus 280 ~~~~~~-------------------~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~ 338 (401)
T 4fdw_A 280 GSTFND-------------------DPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQIN 338 (401)
T ss_dssp SSCCCC-------------------CTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEEC
T ss_pred CccccC-------------------CcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEc
Confidence 443320 00002334445555555555555 2354455555666666666666443 44444
Q ss_pred cccccccccccEEeCCCCcccccCccchhccc-cccccccccccc
Q 002214 511 PESFGELVSLEFLDLSNNDLSGVIPASLEKLL-YLKSLNLSFNKL 554 (952)
Q Consensus 511 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~l~~N~l 554 (952)
+.+|.++ +|+.|++++|.+..+.+..|.+++ .++.|++..|.+
T Consensus 339 ~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 339 FSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp TTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGH
T ss_pred HHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHH
Confidence 5556665 666666666665555555555553 455555555543
No 381
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.66 E-value=2.8e-16 Score=155.28 Aligned_cols=132 Identities=25% Similarity=0.252 Sum_probs=77.8
Q ss_pred cEEeccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEccCc
Q 002214 425 RILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHN 504 (952)
Q Consensus 425 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 504 (952)
+.+++++|+++.++... .++|+.|++++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 10 ~~l~~~~~~l~~~p~~~---~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLTSVPTGI---PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCSSCCTTC---CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCccCCCCC---CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 44455555554332211 134555555555555444445555566666666666666555555666666666666666
Q ss_pred cccCcccccccccccccEEeCCCCcccccCccchhcccccccccccccccccCCC
Q 002214 505 KLQGPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFNKLVGEIP 559 (952)
Q Consensus 505 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 559 (952)
+|++..+..|..+++|++|+|++|+|++..+..+..+++|+.|++++|++.|.+|
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 6665555556666666666666666665555555666666777777776666655
No 382
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.66 E-value=2.8e-16 Score=153.86 Aligned_cols=112 Identities=25% Similarity=0.292 Sum_probs=50.0
Q ss_pred cCCCCCCcEEeccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCc-ccccCCCCC
Q 002214 418 LGDLNSLRILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIP-STIIGLKNL 496 (952)
Q Consensus 418 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L 496 (952)
+..+++|++|++++|++++. ..|..+++|+.|++++|++++.+|..+..+++|+.|+|++|++++... ..+..+++|
T Consensus 45 ~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L 122 (168)
T 2ell_A 45 TAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECL 122 (168)
T ss_dssp CGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCC
T ss_pred HHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCC
Confidence 33344444444444444433 334444444444444444443344444444445555555554443211 344445555
Q ss_pred ceEEccCccccCccc---ccccccccccEEeCCCCccc
Q 002214 497 QHLSLEHNKLQGPIP---ESFGELVSLEFLDLSNNDLS 531 (952)
Q Consensus 497 ~~L~L~~N~l~~~~~---~~~~~l~~L~~L~Ls~N~l~ 531 (952)
+.|++++|++++..+ ..+..+++|+.|++++|.+.
T Consensus 123 ~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 123 KSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred CEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 555555555543322 24444455555555555444
No 383
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.66 E-value=2.2e-15 Score=168.48 Aligned_cols=196 Identities=11% Similarity=0.113 Sum_probs=132.5
Q ss_pred ccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCccCCCCCCcEEeccc
Q 002214 352 LTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLRILSLSS 431 (952)
Q Consensus 352 L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 431 (952)
|+.+.+.+ .++.+.+.+|.++++|+.+++++|.++.+....|. ..+|+.+.|..+ ++.+...+|.++++|+.+++..
T Consensus 159 L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~ 235 (401)
T 4fdw_A 159 VQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPE 235 (401)
T ss_dssp CCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCT
T ss_pred ceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCC
Confidence 44444433 44444445555555555555555555555555554 355555555533 4445555666666666666665
Q ss_pred cccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccC-----CCCcccccCCCCCceEEccCccc
Q 002214 432 NELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLS-----GNIPSTIIGLKNLQHLSLEHNKL 506 (952)
Q Consensus 432 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-----~~~~~~~~~l~~L~~L~L~~N~l 506 (952)
| ++.+...+|.+ .+|+.+.+ .|.++.+....|.++++|+.+++.+|.+. .+.+.+|.++++|+.++|. |.+
T Consensus 236 ~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i 311 (401)
T 4fdw_A 236 N-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESI 311 (401)
T ss_dssp T-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTC
T ss_pred C-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-Cce
Confidence 3 45555566666 56666666 34455455666667777777777666654 5678899999999999999 458
Q ss_pred cCcccccccccccccEEeCCCCcccccCccchhccccccccccccccccc
Q 002214 507 QGPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFNKLVG 556 (952)
Q Consensus 507 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 556 (952)
+.+...+|.++++|+.++|.+| ++.+.+..|.++ +|+.+++++|.+..
T Consensus 312 ~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~ 359 (401)
T 4fdw_A 312 RILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQ 359 (401)
T ss_dssp CEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCB
T ss_pred EEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcc
Confidence 8777889999999999999666 777888999999 99999999997754
No 384
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.65 E-value=5.9e-17 Score=176.14 Aligned_cols=139 Identities=13% Similarity=0.170 Sum_probs=101.8
Q ss_pred cCCccceecCccceEEEEEEeCCCcEEEEEEeeccCc--------------hhhH--------HHHHHHHHHHhCCCCcc
Q 002214 665 QFSEENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQRE--------------GALN--------SFDAECEILKTIRHRNL 722 (952)
Q Consensus 665 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------------~~~~--------~~~~E~~~l~~l~h~ni 722 (952)
-|++.+.||+|+||.||+|...+|+.||||+++.... .... ...+|...+.++.+.++
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4899999999999999999999999999998753210 0001 12356666666654443
Q ss_pred ceeeeEeecCCeeEEEEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCC-
Q 002214 723 VKIISSCTNHNFKALVLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSM- 801 (952)
Q Consensus 723 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~- 801 (952)
....-+... ..++||||++|++|.++... .....++.|++.++.|| |+.|||||||||.|||+++++
T Consensus 176 ~vp~p~~~~--~~~LVME~i~G~~L~~l~~~-------~~~~~l~~qll~~l~~l---H~~gIVHrDLKp~NILl~~dgd 243 (397)
T 4gyi_A 176 PVPEPIAQS--RHTIVMSLVDALPMRQVSSV-------PDPASLYADLIALILRL---AKHGLIHGDFNEFNILIREEKD 243 (397)
T ss_dssp SCCCEEEEE--TTEEEEECCSCEEGGGCCCC-------SCHHHHHHHHHHHHHHH---HHTTEECSCCSTTSEEEEEEEC
T ss_pred CCCeeeecc--CceEEEEecCCccHhhhccc-------HHHHHHHHHHHHHHHHH---HHCCCcCCCCCHHHEEEeCCCC
Confidence 222111111 23799999999888765432 23456889999999999 688999999999999998776
Q ss_pred ---------cEEEeccccccccC
Q 002214 802 ---------VAHLSDFGIAKLLS 815 (952)
Q Consensus 802 ---------~~kl~Dfgla~~~~ 815 (952)
.+.|+||+-+....
T Consensus 244 ~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 244 AEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp SSCTTSEEEEEEECCCTTCEETT
T ss_pred cccccccccceEEEEeCCcccCC
Confidence 48999999887543
No 385
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.65 E-value=3.2e-16 Score=153.37 Aligned_cols=135 Identities=21% Similarity=0.192 Sum_probs=121.7
Q ss_pred CCCCCcEEeccccccC-CcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCce
Q 002214 420 DLNSLRILSLSSNELT-SVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQH 498 (952)
Q Consensus 420 ~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 498 (952)
..++|++|++++|+++ +.+|..+..+++|+.|++++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 3478999999999998 56788899999999999999999965 78899999999999999999878888888999999
Q ss_pred EEccCccccCccc-ccccccccccEEeCCCCcccccCc---cchhccccccccccccccccc
Q 002214 499 LSLEHNKLQGPIP-ESFGELVSLEFLDLSNNDLSGVIP---ASLEKLLYLKSLNLSFNKLVG 556 (952)
Q Consensus 499 L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~---~~~~~l~~L~~L~l~~N~l~~ 556 (952)
|+|++|+|++..+ ..+..+++|+.|++++|++++..+ ..+..+++|+.|++++|++..
T Consensus 100 L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp EECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB
T ss_pred EeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh
Confidence 9999999996532 789999999999999999997665 589999999999999999864
No 386
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.63 E-value=4.1e-16 Score=149.24 Aligned_cols=127 Identities=21% Similarity=0.233 Sum_probs=69.4
Q ss_pred CCCcEEeccccccC-CcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEE
Q 002214 422 NSLRILSLSSNELT-SVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLS 500 (952)
Q Consensus 422 ~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 500 (952)
++|+.|++++|.++ +..|..+..+++|+.|++++|.+++. ..+..+++|+.|+|++|++++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 34444444444444 33334444444444444444444433 4445555555555555555544555555566666666
Q ss_pred ccCccccCc-ccccccccccccEEeCCCCcccccCc---cchhccccccccccc
Q 002214 501 LEHNKLQGP-IPESFGELVSLEFLDLSNNDLSGVIP---ASLEKLLYLKSLNLS 550 (952)
Q Consensus 501 L~~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~~---~~~~~l~~L~~L~l~ 550 (952)
+++|++++. .+..+..+++|+.|++++|++++..+ ..+..+++|+.|+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 666666642 23556666666666666666665544 456666666666665
No 387
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.63 E-value=5.3e-16 Score=148.45 Aligned_cols=128 Identities=22% Similarity=0.303 Sum_probs=93.8
Q ss_pred CcceEEEecccccc-ccCCCccCCCCCCcEEeccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceee
Q 002214 398 SRLYVVYLNRNKLS-GSIPSCLGDLNSLRILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIY 476 (952)
Q Consensus 398 ~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 476 (952)
++|+.|++++|.++ +.+|..+..+++|++|++++|++++. ..|..+++|+.|++++|++++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 44555555555555 45555666677777777777777655 5667777777777777777766777777788888888
Q ss_pred cCCcccCCC-CcccccCCCCCceEEccCccccCccc---ccccccccccEEeCCC
Q 002214 477 LSRNNLSGN-IPSTIIGLKNLQHLSLEHNKLQGPIP---ESFGELVSLEFLDLSN 527 (952)
Q Consensus 477 Ls~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~Ls~ 527 (952)
+++|++++. .+..+..+++|++|++++|++++..+ ..+..+++|+.||+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 888888754 34778888888888888888886555 4788888898888864
No 388
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.62 E-value=1.7e-14 Score=162.03 Aligned_cols=332 Identities=15% Similarity=0.107 Sum_probs=174.3
Q ss_pred cCCCCCCCCCCccceEEcccCcccccCCccccCCCCCcEEEccCCcccccCCccccccCCccEEEeeCCcCCccCchhhh
Q 002214 145 SFPYDMCPGLPRLKGLYVSYNQFKGPIPNNLWHCKELSSVSLSYNQFTGRLPRDLGNSTKLKSLDLGFNNLNGEIPQEIG 224 (952)
Q Consensus 145 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 224 (952)
++....|.++.+|+.+.+..+ ++.+...+|.++.+|+.+++..+ ++.+...+|.++++|+.+.+..+ +......+|.
T Consensus 61 sIg~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~ 137 (394)
T 4fs7_A 61 SIGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFK 137 (394)
T ss_dssp EECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTT
T ss_pred EhHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeee
Confidence 566777778888888888643 66566677888888888888755 55566777888888887777654 3435566677
Q ss_pred ccCCCcEeeeccccccccCCccccCCCCccEEEeeCccccccCCCCcccCCCCCcceEEcccCcCCCCCCcccccchhhh
Q 002214 225 NLRNLEILGIDQSNLVGFVPDTIFNISTLKILSLFNNTLSGNLPSSKNLIGLPNLEGLNLGLNNLSGSIPSFFFNASKLY 304 (952)
Q Consensus 225 ~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~ 304 (952)
.+..+...... ....+...+|.++++|+.+.+.++... . ....|.++.+|+.+++..| +..+...+|.+...|+
T Consensus 138 ~~~~~~~~~~~--~~~~i~~~aF~~c~~L~~i~l~~~~~~-I--~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~ 211 (394)
T 4fs7_A 138 GCDFKEITIPE--GVTVIGDEAFATCESLEYVSLPDSMET-L--HNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLE 211 (394)
T ss_dssp TCCCSEEECCT--TCCEECTTTTTTCTTCCEEECCTTCCE-E--CTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCC
T ss_pred cccccccccCc--cccccchhhhcccCCCcEEecCCccce-e--ccccccCCCCceEEEcCCC-ceEeCchhhccccccc
Confidence 66554443332 333444566777777777777655322 1 2234666777777777655 4444444554443333
Q ss_pred hhhccccCccccccccCcceeechhhHHHHHHHhhccccccccCCCcccEEEccCCCCCCCCCcccccCCCCcEEEccCc
Q 002214 305 ALELGYNSNLKRLGLERNYLTFSTSELMSLFSALVNCKSLKIGNLINLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNN 384 (952)
Q Consensus 305 ~l~l~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N 384 (952)
.+. +..+...... ......+|+.+.+..+ ++.+...+|..+..|+.+.+..+
T Consensus 212 ~i~-----------~~~~~~~i~~----------------~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~ 263 (394)
T 4fs7_A 212 NME-----------FPNSLYYLGD----------------FALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNN 263 (394)
T ss_dssp BCC-----------CCTTCCEECT----------------TTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCT
T ss_pred eee-----------cCCCceEeeh----------------hhcccCCCceEEECCC-ceecccccccccccceeEEcCCC
Confidence 222 2221111000 0112234555555332 23244445555555555555554
Q ss_pred cccCCCCccccCCCcceEEEeccccccccCCCccCCCCCCcEEeccccccCCcCCccccCCCCCceeEecCCccCCCCch
Q 002214 385 KFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLRILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPL 464 (952)
Q Consensus 385 ~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 464 (952)
... +....|..+..++.+....+.+. ..+|..+.+|+.+.+..+ ++.+...+|.++.+|
T Consensus 264 ~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L---------------- 322 (394)
T 4fs7_A 264 KLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSL---------------- 322 (394)
T ss_dssp TCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTC----------------
T ss_pred cce-eeccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCC----------------
Confidence 433 44455555555555554443322 234444555555555433 333444444444444
Q ss_pred hhhcccccceeecCCcccCCCCcccccCCCCCceEEccCccccCcccccccccccccEEeCCCCcccccCccchhccccc
Q 002214 465 EIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNKLQGPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYL 544 (952)
Q Consensus 465 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 544 (952)
+.++|.++ ++.+...+|.++++|+.+++..| ++.+...+|.++++|+.+++..+ ++ .+...|.+.++|
T Consensus 323 --------~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L 390 (394)
T 4fs7_A 323 --------VSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKF 390 (394)
T ss_dssp --------CEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEE
T ss_pred --------CEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCC
Confidence 44444322 33344445555555555555444 44344445555555555555433 22 223344445544
Q ss_pred cc
Q 002214 545 KS 546 (952)
Q Consensus 545 ~~ 546 (952)
+.
T Consensus 391 ~~ 392 (394)
T 4fs7_A 391 KW 392 (394)
T ss_dssp EE
T ss_pred cE
Confidence 43
No 389
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.62 E-value=7.8e-15 Score=164.88 Aligned_cols=318 Identities=12% Similarity=0.056 Sum_probs=220.9
Q ss_pred ccccCCccccCCCCCcEEEccCCcccccCCccccccCCccEEEeeCCcCCccCchhhhccCCCcEeeeccccccccCCcc
Q 002214 167 FKGPIPNNLWHCKELSSVSLSYNQFTGRLPRDLGNSTKLKSLDLGFNNLNGEIPQEIGNLRNLEILGIDQSNLVGFVPDT 246 (952)
Q Consensus 167 l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~ 246 (952)
++.+...+|.++.+|+.+.|..+ ++.+...+|.++++|+.++|.++ ++.+...+|..+.+|+.+.+.. ++..+...+
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~-~l~~i~~~a 135 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPL-MLKSIGVEA 135 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCT-TCCEECTTT
T ss_pred EeEhHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccC-ceeeeccee
Confidence 44455677888888888888744 66667778888888888888755 5546667788888888877763 455555666
Q ss_pred ccCCCCccEEEeeCccccccCCCCcccCCCCCcceEEcccCcCCCCCCcccccchhhhhhhccccCccccccccCcceee
Q 002214 247 IFNISTLKILSLFNNTLSGNLPSSKNLIGLPNLEGLNLGLNNLSGSIPSFFFNASKLYALELGYNSNLKRLGLERNYLTF 326 (952)
Q Consensus 247 ~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l~l~~~~~L~~L~L~~n~l~~ 326 (952)
|.+...++.........- ....|.++.+|+.+.+.++- ..+...+
T Consensus 136 F~~~~~~~~~~~~~~~~i----~~~aF~~c~~L~~i~l~~~~-~~I~~~~------------------------------ 180 (394)
T 4fs7_A 136 FKGCDFKEITIPEGVTVI----GDEAFATCESLEYVSLPDSM-ETLHNGL------------------------------ 180 (394)
T ss_dssp TTTCCCSEEECCTTCCEE----CTTTTTTCTTCCEEECCTTC-CEECTTT------------------------------
T ss_pred eecccccccccCcccccc----chhhhcccCCCcEEecCCcc-ceecccc------------------------------
Confidence 666554443333322221 12346666677777665432 2233333
Q ss_pred chhhHHHHHHHhhccccccccCCCcccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCccccCCCcceEEEec
Q 002214 327 STSELMSLFSALVNCKSLKIGNLINLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLN 406 (952)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~ 406 (952)
|.++.+|+.+.+..| ++.+...+|.++..|+.+.+.++... + .+.+.....|+.+.+.
T Consensus 181 -------------------F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~-i-~~~~~~~~~l~~i~ip 238 (394)
T 4fs7_A 181 -------------------FSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY-L-GDFALSKTGVKNIIIP 238 (394)
T ss_dssp -------------------TTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE-E-CTTTTTTCCCCEEEEC
T ss_pred -------------------ccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE-e-ehhhcccCCCceEEEC
Confidence 344555555555544 44455667777777777777665543 2 2333344677777775
Q ss_pred cccccccCCCccCCCCCCcEEeccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCC
Q 002214 407 RNKLSGSIPSCLGDLNSLRILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNI 486 (952)
Q Consensus 407 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 486 (952)
.+ ++.....+|.++..|+.+.+..+.. .+....|.....++.+....+.+. ...|..+.+|+.+.+.++ ++.+.
T Consensus 239 ~~-~~~i~~~~f~~~~~l~~~~~~~~~~-~i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~ 312 (394)
T 4fs7_A 239 DS-FTELGKSVFYGCTDLESISIQNNKL-RIGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIG 312 (394)
T ss_dssp TT-CCEECSSTTTTCSSCCEEEECCTTC-EECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEEC
T ss_pred CC-ceecccccccccccceeEEcCCCcc-eeeccccccccccceeccCceeec---cccccccccccccccccc-cceec
Confidence 43 3335566778888888888877654 367778888888888888776543 346788889999999765 66677
Q ss_pred cccccCCCCCceEEccCccccCcccccccccccccEEeCCCCcccccCccchhccccccccccccc
Q 002214 487 PSTIIGLKNLQHLSLEHNKLQGPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFN 552 (952)
Q Consensus 487 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N 552 (952)
..+|.++++|+.++|.++ ++.+...+|.++.+|+.+++..| ++.+....|.++++|+.+++..|
T Consensus 313 ~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 313 EEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp TTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred hhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 889999999999999865 77677889999999999999887 77778889999999999999765
No 390
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.61 E-value=2.3e-15 Score=150.55 Aligned_cols=127 Identities=27% Similarity=0.355 Sum_probs=92.5
Q ss_pred EEEeccccccccCCCccCCCCCCcEEeccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcc
Q 002214 402 VVYLNRNKLSGSIPSCLGDLNSLRILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNN 481 (952)
Q Consensus 402 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 481 (952)
.+++++|.++ .+|..+. ++|++|++++|+|+. +|..|..+++|+.|+|++|+|++..+..|.++++|++|+|++|+
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~~-ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFTL-VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCS-CCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCch-hHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 4445555554 3333222 466777777777763 34667777777777777777776666777777888888888888
Q ss_pred cCCCCcccccCCCCCceEEccCccccCcccccccccccccEEeCCCCcccc
Q 002214 482 LSGNIPSTIIGLKNLQHLSLEHNKLQGPIPESFGELVSLEFLDLSNNDLSG 532 (952)
Q Consensus 482 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 532 (952)
|+++.+..|.++++|+.|+|++|+|+...+..|..+++|+.|+|++|++..
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 887777888888888888888888887666678888899999999998864
No 391
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.61 E-value=3.1e-15 Score=147.75 Aligned_cols=132 Identities=25% Similarity=0.302 Sum_probs=99.6
Q ss_pred eEEEeccccccccCCCccCCCCCCcEEeccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCc
Q 002214 401 YVVYLNRNKLSGSIPSCLGDLNSLRILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRN 480 (952)
Q Consensus 401 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 480 (952)
+.+++++|+++ .+|..+ .++|++|++++|+++++.+..|..+++|+.|++++|++++..+..|..+++|+.|+|++|
T Consensus 10 ~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 44555555555 233322 256777777777777766667777777777777777777666666778888888888888
Q ss_pred ccCCCCcccccCCCCCceEEccCccccCcccccccccccccEEeCCCCcccccCc
Q 002214 481 NLSGNIPSTIIGLKNLQHLSLEHNKLQGPIPESFGELVSLEFLDLSNNDLSGVIP 535 (952)
Q Consensus 481 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 535 (952)
++++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|++++..|
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 8887777778889999999999999987767678889999999999999986544
No 392
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.57 E-value=2.7e-15 Score=147.93 Aligned_cols=130 Identities=18% Similarity=0.219 Sum_probs=69.9
Q ss_pred CCCCCcEEeccccccCCcCCccccCC-CCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCce
Q 002214 420 DLNSLRILSLSSNELTSVIPSTFWNL-EDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQH 498 (952)
Q Consensus 420 ~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 498 (952)
++++|++|++++|+++.+ +. +..+ ++|+.|++++|.+++. ..+..+++|++|+|++|+|++..+..|..+++|++
T Consensus 17 ~~~~L~~L~l~~n~l~~i-~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 92 (176)
T 1a9n_A 17 NAVRDRELDLRGYKIPVI-EN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTE 92 (176)
T ss_dssp CTTSCEEEECTTSCCCSC-CC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCE
T ss_pred CcCCceEEEeeCCCCchh-HH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCE
Confidence 334444444444444432 22 2222 2444444444444432 34455555555666666655444444466666666
Q ss_pred EEccCccccCcccc--cccccccccEEeCCCCcccccCcc----chhcccccccccccccccc
Q 002214 499 LSLEHNKLQGPIPE--SFGELVSLEFLDLSNNDLSGVIPA----SLEKLLYLKSLNLSFNKLV 555 (952)
Q Consensus 499 L~L~~N~l~~~~~~--~~~~l~~L~~L~Ls~N~l~~~~~~----~~~~l~~L~~L~l~~N~l~ 555 (952)
|+|++|+|+ .+|. .+..+++|+.|++++|+++. .|. .+..+++|+.||+++|+..
T Consensus 93 L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 93 LILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp EECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCHH
T ss_pred EECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCHH
Confidence 666666665 3333 56666666666666666663 343 3666677777777766654
No 393
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.55 E-value=9.1e-17 Score=161.93 Aligned_cols=162 Identities=20% Similarity=0.269 Sum_probs=99.4
Q ss_pred cccCCCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCccCCCCCCcEEeccccccCCcCCccccCCCCCc
Q 002214 370 LGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLRILSLSSNELTSVIPSTFWNLEDIL 449 (952)
Q Consensus 370 l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 449 (952)
+.....++.++++.|.+.+..|. ++ .+|..+..+++|++|++++|+++++ | .+..+++|+
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~-----------------l~-~l~~~~~~l~~L~~L~ls~n~l~~l-~-~~~~l~~L~ 73 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPP-----------------IE-KMDATLSTLKACKHLALSTNNIEKI-S-SLSGMENLR 73 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTT-----------------CC-CCHHHHHHTTTCSEEECSEEEESCC-C-CHHHHTTCC
T ss_pred HHhcccccCcchheeEeccccCc-----------------Hh-hhhHHHhcCCCCCEEECCCCCCccc-c-ccccCCCCC
Confidence 44456666667777766655443 11 1222455556666666666666552 3 556666666
Q ss_pred eeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEccCccccCccc-ccccccccccEEeCCCC
Q 002214 450 GFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNKLQGPIP-ESFGELVSLEFLDLSNN 528 (952)
Q Consensus 450 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N 528 (952)
.|++++|.++ .+|..+..+++|+.|+|++|++++ +| .+..+++|+.|+|++|+|++..+ ..+..+++|+.|++++|
T Consensus 74 ~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N 150 (198)
T 1ds9_A 74 ILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGN 150 (198)
T ss_dssp EEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSC
T ss_pred EEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCC
Confidence 6666666666 455566666677777777777764 33 46666777777777777764332 35667777777777777
Q ss_pred cccccCcc----------chhccccccccccccccccc
Q 002214 529 DLSGVIPA----------SLEKLLYLKSLNLSFNKLVG 556 (952)
Q Consensus 529 ~l~~~~~~----------~~~~l~~L~~L~l~~N~l~~ 556 (952)
++++..|. .+..+++|+.|| +|+++.
T Consensus 151 ~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 151 PLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVDV 186 (198)
T ss_dssp HHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGTT
T ss_pred ccccccccccchHHHHHHHHHhCCCcEEEC--CcccCH
Confidence 77655443 267777787775 666653
No 394
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.54 E-value=8e-15 Score=144.54 Aligned_cols=105 Identities=17% Similarity=0.219 Sum_probs=64.1
Q ss_pred CCcEEeccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcc--cccCCCCCceEE
Q 002214 423 SLRILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPS--TIIGLKNLQHLS 500 (952)
Q Consensus 423 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~--~~~~l~~L~~L~ 500 (952)
+|++|++++|+|+++ ..|..+++|+.|++++|+|++..+..|..+++|++|+|++|+|+. +|. .+..+++|+.|+
T Consensus 43 ~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~-~~~~~~l~~l~~L~~L~ 119 (176)
T 1a9n_A 43 QFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVE-LGDLDPLASLKSLTYLC 119 (176)
T ss_dssp CCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCCC-GGGGGGGGGCTTCCEEE
T ss_pred CCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCCc-chhhHhhhcCCCCCEEE
Confidence 555555555555543 345555555555555555554433444666666666666666653 333 566777777777
Q ss_pred ccCccccCcccc----cccccccccEEeCCCCccc
Q 002214 501 LEHNKLQGPIPE----SFGELVSLEFLDLSNNDLS 531 (952)
Q Consensus 501 L~~N~l~~~~~~----~~~~l~~L~~L~Ls~N~l~ 531 (952)
+++|+++. .|. .+..+++|+.||+++|.+.
T Consensus 120 l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 120 ILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCSSGGGG-STTHHHHHHHHCTTCSEETTEECCHH
T ss_pred ecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCHH
Confidence 77777763 444 3777777788887777765
No 395
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.53 E-value=1.2e-14 Score=142.05 Aligned_cols=90 Identities=23% Similarity=0.285 Sum_probs=54.2
Q ss_pred cccceeecCCcccCCCCcccccCCCCCceEEccCccccCcccccccccccccEEeCCCCcccccCccchhcccccccccc
Q 002214 470 KAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNKLQGPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNL 549 (952)
Q Consensus 470 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l 549 (952)
++|+.|+|++|+|+++.|..|.++++|++|+|++|+|+++.+..|..+++|++|+|++|+|+++.+..|..+++|+.|+|
T Consensus 30 ~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 109 (170)
T 3g39_A 30 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWL 109 (170)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEe
Confidence 44555555555555555555666666666666666666555555566666666666666666555555666666666666
Q ss_pred cccccccCCC
Q 002214 550 SFNKLVGEIP 559 (952)
Q Consensus 550 ~~N~l~~~~p 559 (952)
++|+|+|.++
T Consensus 110 ~~N~~~c~c~ 119 (170)
T 3g39_A 110 LNNPWDCACS 119 (170)
T ss_dssp CSSCBCTTBG
T ss_pred CCCCCCCCch
Confidence 6666666554
No 396
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.52 E-value=3e-16 Score=158.17 Aligned_cols=155 Identities=24% Similarity=0.289 Sum_probs=101.8
Q ss_pred cCCCcccEEEccCCCCCCCCCc------ccccCCCCcEEEccCccccCCCCccccCCCcceEEEeccccccccCCCccCC
Q 002214 347 GNLINLTTLSLGDNNLSGSLPI------TLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGD 420 (952)
Q Consensus 347 ~~l~~L~~L~L~~n~l~~~~~~------~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 420 (952)
.....++.++++++.+++..|. .+..+++|++|++++|.|++ .| .+..+++|+.|++++|+++ .+|..+..
T Consensus 15 ~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~ 91 (198)
T 1ds9_A 15 EERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAV 91 (198)
T ss_dssp HHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHH
T ss_pred HhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhc
Confidence 3455666666666666655554 67777777777777777765 34 5656666666666666655 33444444
Q ss_pred CCCCcEEeccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCc-ccccCCCCCceE
Q 002214 421 LNSLRILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIP-STIIGLKNLQHL 499 (952)
Q Consensus 421 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L 499 (952)
+++|+.|++++|++++ +| .+..+++|+.|+|++|+++...+ ..+..+++|++|
T Consensus 92 ------------------------~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L 145 (198)
T 1ds9_A 92 ------------------------ADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDL 145 (198)
T ss_dssp ------------------------HHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEE
T ss_pred ------------------------CCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEE
Confidence 4445555555555543 33 46677778888888888775333 467788888888
Q ss_pred EccCccccCccccc----------ccccccccEEeCCCCcccc
Q 002214 500 SLEHNKLQGPIPES----------FGELVSLEFLDLSNNDLSG 532 (952)
Q Consensus 500 ~L~~N~l~~~~~~~----------~~~l~~L~~L~Ls~N~l~~ 532 (952)
++++|++++..|.. +..+++|+.|| +|.++.
T Consensus 146 ~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 146 LLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVDV 186 (198)
T ss_dssp EECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGTT
T ss_pred EecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccCH
Confidence 88888887665542 78888999887 777763
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.50 E-value=3.6e-14 Score=139.13 Aligned_cols=89 Identities=27% Similarity=0.327 Sum_probs=43.4
Q ss_pred cccceeecCCcccCCCCcccccCCCCCceEEccCccccCcccccccccccccEEeCCCCcccccCccchhcccccccccc
Q 002214 470 KAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNKLQGPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNL 549 (952)
Q Consensus 470 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l 549 (952)
++|+.|+|++|+|+++.|..|.++++|++|+|++|+|+++.+..|..+++|+.|+|++|+|+++++..|..+++|+.|+|
T Consensus 33 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L 112 (174)
T 2r9u_A 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYL 112 (174)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEe
Confidence 34444444444444444444455555555555555555433334445555555555555555444444555555555555
Q ss_pred cccccccCC
Q 002214 550 SFNKLVGEI 558 (952)
Q Consensus 550 ~~N~l~~~~ 558 (952)
++|+|.|.+
T Consensus 113 ~~N~~~c~~ 121 (174)
T 2r9u_A 113 YNNPWDCEC 121 (174)
T ss_dssp CSSCBCTTB
T ss_pred CCCCccccc
Confidence 555555443
No 398
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.45 E-value=3.8e-13 Score=131.39 Aligned_cols=107 Identities=22% Similarity=0.192 Sum_probs=83.1
Q ss_pred CcEEeccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEccC
Q 002214 424 LRILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEH 503 (952)
Q Consensus 424 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 503 (952)
.+.+++++|+++.++. .+ .++|+.|+|++|+|++..|..|..+++|++|+|++|+|+++.+..|..+++|++|+|++
T Consensus 11 ~~~l~~s~n~l~~ip~-~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLASVPT-GI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSSCCS-CC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCccCc-cC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 4567777777765433 22 26677777777777776777778888888888888888877777788889999999999
Q ss_pred ccccCcccccccccccccEEeCCCCccccc
Q 002214 504 NKLQGPIPESFGELVSLEFLDLSNNDLSGV 533 (952)
Q Consensus 504 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 533 (952)
|+|++..+..|..+++|+.|+|++|+++..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 999877777788899999999999988754
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.43 E-value=4.4e-13 Score=131.40 Aligned_cols=105 Identities=22% Similarity=0.252 Sum_probs=79.6
Q ss_pred cEEeccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEccCc
Q 002214 425 RILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHN 504 (952)
Q Consensus 425 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 504 (952)
+.+++++|+++.++. .+. ++|+.|+|++|+|++..|..|.++++|+.|+|++|+|+++.+..|..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~~iP~-~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLASVPA-GIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCSSCCS-CCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCCccCC-CcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 566677777654433 222 66777777777777666777777888888888888888776677788888888889888
Q ss_pred cccCcccccccccccccEEeCCCCcccc
Q 002214 505 KLQGPIPESFGELVSLEFLDLSNNDLSG 532 (952)
Q Consensus 505 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 532 (952)
+|++..+..|..+++|+.|+|++|++..
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCccc
Confidence 8887666668888999999999998874
No 400
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.43 E-value=1.2e-11 Score=138.95 Aligned_cols=167 Identities=13% Similarity=0.085 Sum_probs=84.2
Q ss_pred eEEEEEecCCCCcccCCccccCCcccCeeeccccccccccCCCcCCcC-CCcEEeCcCCcccccCChhhcCCCCCCeEee
Q 002214 34 RVTSLTISDLGLAGTIPSHLGNLSSLQTLVLSRNWFSGTIPKEIGNLT-KLKELHLDYNKLQGEIPEELGNLAELEMLVL 112 (952)
Q Consensus 34 ~~~~l~l~~~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 112 (952)
.++.....+..-.-.||+.+..-. ....++..-..+|.+.+ .|+.+.+-.+ ++.+-..+|.++.+|+.+.+
T Consensus 23 ~~~i~~y~g~~~~v~IP~~i~~~~-------~~~~Vt~Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~ 94 (394)
T 4gt6_A 23 TATITKYTGNEHRITIPAQVTHGA-------YIYPVSKIGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTI 94 (394)
T ss_dssp CEEEEEECCCCSEEECCSEEEETT-------EEEEEEEECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEE
T ss_pred cEEEEEEeCCCceEEECCceeccc-------cceeeeEcCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEee
Confidence 344444455444445776553210 00123422334566553 4777777654 55455677777777777777
Q ss_pred cCccCccccCcccccccccccceeeccccccccCCCCCCCCCCccceEEcccCcccccCCccccCCCCCcEEEccCCccc
Q 002214 113 NNNLLTGTIPASIFNLSFISTALDFSDNSLTGSFPYDMCPGLPRLKGLYVSYNQFKGPIPNNLWHCKELSSVSLSYNQFT 192 (952)
Q Consensus 113 ~~n~l~~~~p~~~~~l~~l~~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~ 192 (952)
..|. |..+. .+....|.++.+|+.+.+..+ ++......|..+.+|+.+.+..+. +
T Consensus 95 ~~n~-----p~~l~------------------~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~lp~~~-~ 149 (394)
T 4gt6_A 95 QDNK-----PSCVK------------------KIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTVTIPEGV-T 149 (394)
T ss_dssp GGGC-----CCCCC------------------EECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEECCTTC-C
T ss_pred cCCC-----CCeee------------------EechhhchhcccceeeccCCc-cceehhhhhhhhccccccccccee-e
Confidence 6653 11110 334444555566666655443 333444556666666666665432 2
Q ss_pred ccCCccccccCCccEEEeeCCcCCccCchhhhccCCCcEeeec
Q 002214 193 GRLPRDLGNSTKLKSLDLGFNNLNGEIPQEIGNLRNLEILGID 235 (952)
Q Consensus 193 ~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 235 (952)
.+...+|....+|+.+.+..+ ++.+...+|.. .+|+.+.+.
T Consensus 150 ~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip 190 (394)
T 4gt6_A 150 SVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIP 190 (394)
T ss_dssp EECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEEC
T ss_pred eecccceecccccccccccce-eeEeccccccc-cceeEEEEC
Confidence 244555566666666666543 22233333432 345555443
No 401
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.42 E-value=1.1e-11 Score=139.11 Aligned_cols=134 Identities=10% Similarity=0.154 Sum_probs=68.7
Q ss_pred cCCCccCCCCCCcEEeccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCCCcccccC
Q 002214 413 SIPSCLGDLNSLRILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIG 492 (952)
Q Consensus 413 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 492 (952)
....+|.++.+|+.+.+..+.. .+...+|.+++.|+.+.+. +.++.+....|.++.+|+.+.|..+ ++.+...+|.+
T Consensus 256 i~~~aF~~c~~L~~i~lp~~~~-~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~ 332 (394)
T 4gt6_A 256 IETHAFDSCAYLASVKMPDSVV-SIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAG 332 (394)
T ss_dssp ECTTTTTTCSSCCEEECCTTCC-EECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT
T ss_pred cccceeeecccccEEecccccc-eecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhC
Confidence 3344555566666666554433 2455556666666666654 3344344455666666666666543 44455556666
Q ss_pred CCCCceEEccCccccCcccccccccccccEEeCCCCcccccCccchhcccccccccccccc
Q 002214 493 LKNLQHLSLEHNKLQGPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFNK 553 (952)
Q Consensus 493 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~ 553 (952)
+.+|+.+.|..+ ++.+...+|.++.+|+.+++.+|.... ..+....+|+.+.+..|.
T Consensus 333 C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~ 389 (394)
T 4gt6_A 333 CEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGS 389 (394)
T ss_dssp CTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC---------
T ss_pred CCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCC
Confidence 666666666543 444555566666666666666654321 234445556655555443
No 402
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.33 E-value=3.3e-12 Score=140.87 Aligned_cols=132 Identities=17% Similarity=0.096 Sum_probs=80.7
Q ss_pred EEecccc-ccCCcCCccccCCCCCceeEecC-CccCCCCchhhhcccccceeecCCcccCCCCcccccCCCCCceEEccC
Q 002214 426 ILSLSSN-ELTSVIPSTFWNLEDILGFDFSS-NSLNGSLPLEIENLKAVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEH 503 (952)
Q Consensus 426 ~L~L~~N-~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 503 (952)
.++++++ +|+++ |. +..+++|+.|+|++ |+|++..+..|.++++|+.|+|++|+|+++.|..|.++++|+.|+|++
T Consensus 12 ~v~~~~~n~l~~i-p~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALDSL-HH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCTTT-TT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCCcc-CC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 3455555 55543 33 55556666666664 666655556666666666667777777666666777777777777777
Q ss_pred ccccCcccccccccccccEEeCCCCcccccCc-cchhcccccccccccccccccCCCC
Q 002214 504 NKLQGPIPESFGELVSLEFLDLSNNDLSGVIP-ASLEKLLYLKSLNLSFNKLVGEIPR 560 (952)
Q Consensus 504 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~ 560 (952)
|+|++..+..|..++ |+.|+|++|.|...-. ..|..+.......+..+.++|..|.
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~~ 146 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQG 146 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSSS
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCCh
Confidence 777765555565554 7777777777764321 2333333344455566777776665
No 403
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.32 E-value=2.8e-14 Score=157.86 Aligned_cols=172 Identities=22% Similarity=0.203 Sum_probs=90.7
Q ss_pred CCcccEEEccCCCCCCCCCcccccC-----CCCcEEEccCccccCCCCcccc-CCCcceEEEeccccccccCCCcc----
Q 002214 349 LINLTTLSLGDNNLSGSLPITLGRL-----KKLQGLDLQNNKFEGPIPQEFC-HFSRLYVVYLNRNKLSGSIPSCL---- 418 (952)
Q Consensus 349 l~~L~~L~L~~n~l~~~~~~~l~~l-----~~L~~L~L~~N~i~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~---- 418 (952)
+++|+.|+|++|.++......+... ++|++|+|++|.|+......+. .+.+|+.|+|++|.|+......+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 4578888888888875433333332 5777777777777533222222 23455555555555542222221
Q ss_pred -CCCCCCcEEeccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccceeecCCcccCCC----CcccccCC
Q 002214 419 -GDLNSLRILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVDIYLSRNNLSGN----IPSTIIGL 493 (952)
Q Consensus 419 -~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l 493 (952)
...++|++|+|++|.|+..... .++..+..+++|++|+|++|.|+.. ++..+...
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~--------------------~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~ 210 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVA--------------------VLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRN 210 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHH--------------------HHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGC
T ss_pred HhcCCccceeeCCCCCCChHHHH--------------------HHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcC
Confidence 1233444444444444321111 1223334455566666666655532 23445556
Q ss_pred CCCceEEccCccccCc----ccccccccccccEEeCCCCcccccCccchhc
Q 002214 494 KNLQHLSLEHNKLQGP----IPESFGELVSLEFLDLSNNDLSGVIPASLEK 540 (952)
Q Consensus 494 ~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 540 (952)
++|+.|+|++|.|++. ++..+...++|++|||++|.|+......+..
T Consensus 211 ~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~ 261 (372)
T 3un9_A 211 RQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLRD 261 (372)
T ss_dssp SCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHHH
T ss_pred CCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHHH
Confidence 6777777777777642 2334445577777777777776544444443
No 404
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.32 E-value=1.1e-12 Score=144.88 Aligned_cols=131 Identities=21% Similarity=0.258 Sum_probs=108.1
Q ss_pred ceeEecCC-ccCCCCchhhhcccccceeecCC-cccCCCCcccccCCCCCceEEccCccccCcccccccccccccEEeCC
Q 002214 449 LGFDFSSN-SLNGSLPLEIENLKAVVDIYLSR-NNLSGNIPSTIIGLKNLQHLSLEHNKLQGPIPESFGELVSLEFLDLS 526 (952)
Q Consensus 449 ~~L~Ls~N-~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 526 (952)
..++++++ +|+. +|. +..+++|+.|+|++ |+|+++.+..|.++++|+.|+|++|+|+++.|..|..+++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35789998 8985 777 99999999999996 99999888999999999999999999999889999999999999999
Q ss_pred CCcccccCccchhcccccccccccccccccCCCCCCCcccc---cccccccCccCCCCCc
Q 002214 527 NNDLSGVIPASLEKLLYLKSLNLSFNKLVGEIPRGGAFANF---SAESFIGNDLLCGSPY 583 (952)
Q Consensus 527 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~---~~~~~~~n~~~c~~p~ 583 (952)
+|+|+++++..|..++ |+.|+|++|+|.|.+... .|..+ ....+..+...|..|.
T Consensus 89 ~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~-~~~~~~~~~~~~l~~~~~~C~~~~ 146 (347)
T 2ifg_A 89 FNALESLSWKTVQGLS-LQELVLSGNPLHCSCALR-WLQRWEEEGLGGVPEQKLQCHGQG 146 (347)
T ss_dssp SSCCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGH-HHHHHHHTTCSSCGGGCCCCSSSS
T ss_pred CCccceeCHHHcccCC-ceEEEeeCCCccCCCccH-HHHHHHHhCcccccccCCCCCCCh
Confidence 9999987777777776 999999999999987632 11111 1122334566776664
No 405
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.28 E-value=5.5e-14 Score=155.52 Aligned_cols=192 Identities=17% Similarity=0.157 Sum_probs=119.9
Q ss_pred cCccccccccCcceeechhhHHHHHHHhhccccccccCCCcccEEEccCCCCCCCCCccc-ccCCCCcEEEccCccccCC
Q 002214 311 NSNLKRLGLERNYLTFSTSELMSLFSALVNCKSLKIGNLINLTTLSLGDNNLSGSLPITL-GRLKKLQGLDLQNNKFEGP 389 (952)
Q Consensus 311 ~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l-~~l~~L~~L~L~~N~i~~~ 389 (952)
.+.++.|++++|.++......+. ..+. ...++|++|+|++|.++......+ ..+++|++|+|++|.|+..
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~--~~L~-------~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~ 141 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVA--AVLG-------SGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPE 141 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHH--HHHS-------SCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHH--HHHh-------hCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHH
Confidence 46899999999998765544322 1111 234689999999999975433333 3467899999999999765
Q ss_pred CCcccc-----CCCcceEEEeccccccc----cCCCccCCCCCCcEEeccccccCCcCCccccCCCCCceeEecCCccCC
Q 002214 390 IPQEFC-----HFSRLYVVYLNRNKLSG----SIPSCLGDLNSLRILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNG 460 (952)
Q Consensus 390 ~~~~~~-----~l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 460 (952)
....++ ..++|+.|+|++|.|+. .++..+..+++|++|+|++|+|+.....
T Consensus 142 ~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~-------------------- 201 (372)
T 3un9_A 142 ACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLE-------------------- 201 (372)
T ss_dssp HHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHH--------------------
T ss_pred HHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHH--------------------
Confidence 544543 46889999999999974 2344456778888888888888643211
Q ss_pred CCchhhhcccccceeecCCcccCCC----CcccccCCCCCceEEccCccccCccccccccccc-----ccEEe--CCCCc
Q 002214 461 SLPLEIENLKAVVDIYLSRNNLSGN----IPSTIIGLKNLQHLSLEHNKLQGPIPESFGELVS-----LEFLD--LSNND 529 (952)
Q Consensus 461 ~~~~~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-----L~~L~--Ls~N~ 529 (952)
.++..+...++|+.|+|++|.|+.. ++..+...++|++|+|++|.|++.....+..+.. |+.+. +..|.
T Consensus 202 ~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~~~~~~~~L~~l~~ll~~~~ 281 (372)
T 3un9_A 202 LLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLRDLGGAAEGGARVVVSLTEGTA 281 (372)
T ss_dssp HHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHHHCC------CEEECCCC----
T ss_pred HHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHHHHhcCCCccchhhHhhhcCCc
Confidence 1123334444555555555555432 2233445677888888888777544444433211 55555 55555
Q ss_pred cc
Q 002214 530 LS 531 (952)
Q Consensus 530 l~ 531 (952)
++
T Consensus 282 ~~ 283 (372)
T 3un9_A 282 VS 283 (372)
T ss_dssp CH
T ss_pred cC
Confidence 54
No 406
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.23 E-value=2e-11 Score=128.85 Aligned_cols=147 Identities=14% Similarity=0.111 Sum_probs=115.5
Q ss_pred HHHHhccCCccceecCccceEEEEEEeCCCcEEEEEEeeccCchhhHHHHHHHHHHHhCC-CCccceeeeEeecCCeeEE
Q 002214 659 LLRATDQFSEENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQREGALNSFDAECEILKTIR-HRNLVKIISSCTNHNFKAL 737 (952)
Q Consensus 659 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 737 (952)
+....+.|++....+.|+.+.||++.. +++.+++|+...........+.+|+.+++.+. +..+.++++++...+..|+
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~-~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~l 87 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL 87 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred HHHHhccceeEeeccCCCCCeEEEEEC-CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEE
Confidence 344556788888899999999999986 47899999986532222356889999999984 6778889999988889999
Q ss_pred EEEccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhc-------------------------------------
Q 002214 738 VLEYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFG------------------------------------- 780 (952)
Q Consensus 738 v~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~------------------------------------- 780 (952)
||||++|.++.+.... ......++.+++++++.||..
T Consensus 88 v~e~i~G~~l~~~~~~------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (263)
T 3tm0_A 88 LMSEADGVLCSEEYED------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEED 161 (263)
T ss_dssp EEECCSSEEHHHHCCT------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTT
T ss_pred EEEecCCeehhhccCC------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccc
Confidence 9999999998775321 123447888999999999751
Q ss_pred -------------------CCCCeEeCCCCCCCeeeCCCCcEEEecccccc
Q 002214 781 -------------------HSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAK 812 (952)
Q Consensus 781 -------------------h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~ 812 (952)
+...++|||++|.||+++.+..+.|+||+.+.
T Consensus 162 ~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 162 TPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp CSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred ccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 11558999999999999876667799999775
No 407
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.13 E-value=1.3e-09 Score=121.46 Aligned_cols=146 Identities=11% Similarity=0.134 Sum_probs=73.4
Q ss_pred CccccCCCcceEEEeccccccccCCCccCCCCCCcEEeccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhccc
Q 002214 391 PQEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLRILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLK 470 (952)
Q Consensus 391 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 470 (952)
...|....+|+.+.+..+ +......+|.++..|+.+.+..+ ++.+...+|.++.+|+.+.+..+ +.......|.++.
T Consensus 210 ~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~ 286 (379)
T 4h09_A 210 AYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCS 286 (379)
T ss_dssp TTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCT
T ss_pred ecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccc
Confidence 334444444444444332 22233444555555555555443 44444455555555555555432 3323344555555
Q ss_pred ccceeecCCcccCCCCcccccCCCCCceEEccCccccCcccccccccccccEEeCCCCcccccCccchhcc
Q 002214 471 AVVDIYLSRNNLSGNIPSTIIGLKNLQHLSLEHNKLQGPIPESFGELVSLEFLDLSNNDLSGVIPASLEKL 541 (952)
Q Consensus 471 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 541 (952)
+|+.+.+.++.++.+...+|.++.+|+.+.|..+ ++.+...+|.++.+|+.+.+..+ ++.+...+|.+.
T Consensus 287 ~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c 355 (379)
T 4h09_A 287 NLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGS 355 (379)
T ss_dssp TCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTS
T ss_pred ccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCC
Confidence 5555555555555555556666666666666543 44344456666666666666543 443444445443
No 408
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.12 E-value=3.4e-09 Score=118.18 Aligned_cols=311 Identities=11% Similarity=0.044 Sum_probs=172.5
Q ss_pred CccceEEcccCcccccCCccccCCCCCcEEEccCCcccccCCccccccCCccEEEeeCCcCCccCchhhhccCCCcEeee
Q 002214 155 PRLKGLYVSYNQFKGPIPNNLWHCKELSSVSLSYNQFTGRLPRDLGNSTKLKSLDLGFNNLNGEIPQEIGNLRNLEILGI 234 (952)
Q Consensus 155 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 234 (952)
.+|+.+.+.. .++.+...+|.+|.+|+.+.|..+ ++.+...+|.+. +|+.+.+..+ ++.+...+|... +|+.+.+
T Consensus 46 ~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~~-~L~~i~l 120 (379)
T 4h09_A 46 DRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQGT-DLDDFEF 120 (379)
T ss_dssp GGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTTC-CCSEEEC
T ss_pred cCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceeccC-CcccccC
Confidence 4555555543 344344555666666666666543 444555556554 4555555433 332333444433 5666665
Q ss_pred ccccccccCCccccCCCCccEEEeeCccccccCCCCcccCCCCCcceEEcccCcCCCCCCcccccchhhhhhhccccCcc
Q 002214 235 DQSNLVGFVPDTIFNISTLKILSLFNNTLSGNLPSSKNLIGLPNLEGLNLGLNNLSGSIPSFFFNASKLYALELGYNSNL 314 (952)
Q Consensus 235 ~~n~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~l~l~~~~~L 314 (952)
.. .+..+....|.+. +|+.+.+..+- +.. ....+..+.+++.+.+..+.........+ ......
T Consensus 121 p~-~~~~i~~~~F~~~-~l~~~~~~~~v-~~i--~~~~f~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~---------- 184 (379)
T 4h09_A 121 PG-ATTEIGNYIFYNS-SVKRIVIPKSV-TTI--KDGIGYKAENLEKIEVSSNNKNYVAENYV-LYNKNK---------- 184 (379)
T ss_dssp CT-TCCEECTTTTTTC-CCCEEEECTTC-CEE--CSCTTTTCTTCCEEEECTTCSSEEEETTE-EEETTS----------
T ss_pred CC-ccccccccccccc-eeeeeecccee-ecc--ccchhcccccccccccccccceeecccce-eccccc----------
Confidence 43 2333333333332 34444443321 111 11224445555555544433321111000 000000
Q ss_pred ccccccCcceeechhhHHHHHHHhhccccccccCCCcccEEEccCCCCCCCCCcccccCCCCcEEEccCccccCCCCccc
Q 002214 315 KRLGLERNYLTFSTSELMSLFSALVNCKSLKIGNLINLTTLSLGDNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEF 394 (952)
Q Consensus 315 ~~L~L~~n~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~ 394 (952)
.....+.....+..+.+..+.. ......+....+|+.+.+..+ +..+...+|
T Consensus 185 --------------------------~~~~~~~~~~~~~~~~~~~~~~-~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f 236 (379)
T 4h09_A 185 --------------------------TILESYPAAKTGTEFTIPSTVK-TVTAYGFSYGKNLKKITITSG-VTTLGDGAF 236 (379)
T ss_dssp --------------------------SEEEECCTTCCCSEEECCTTCC-EECTTTTTTCSSCSEEECCTT-CCEECTTTT
T ss_pred --------------------------ceecccccccccccccccccee-EEeecccccccccceeeeccc-eeEEccccc
Confidence 0000122334455555544332 245556666777777777554 344666677
Q ss_pred cCCCcceEEEeccccccccCCCccCCCCCCcEEeccccccCCcCCccccCCCCCceeEecCCccCCCCchhhhcccccce
Q 002214 395 CHFSRLYVVYLNRNKLSGSIPSCLGDLNSLRILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLPLEIENLKAVVD 474 (952)
Q Consensus 395 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 474 (952)
.++..|+.+.+..+ ++.....+|.++.+|+.+.+..+ ++.+...+|.++.+|+.+.+.++.++.+....|.++.+|+.
T Consensus 237 ~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~ 314 (379)
T 4h09_A 237 YGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSS 314 (379)
T ss_dssp TTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCE
T ss_pred cCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCE
Confidence 77777777777655 55456667777778888877643 55566777888888888888877777666777888888888
Q ss_pred eecCCcccCCCCcccccCCCCCceEEccCccccCcccccccccc
Q 002214 475 IYLSRNNLSGNIPSTIIGLKNLQHLSLEHNKLQGPIPESFGELV 518 (952)
Q Consensus 475 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 518 (952)
+.|..+ ++.+...+|.++++|+.+.+..+ ++.+...+|.+..
T Consensus 315 i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c~ 356 (379)
T 4h09_A 315 VTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGSS 356 (379)
T ss_dssp EECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTSS
T ss_pred EEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCCC
Confidence 888654 66566778888888888888765 6555567777654
No 409
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.12 E-value=1e-10 Score=123.23 Aligned_cols=137 Identities=17% Similarity=0.094 Sum_probs=100.8
Q ss_pred ccCCccceecCccceEEEEEEeCCCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCc--cceeeeEeecCCeeEEEEEc
Q 002214 664 DQFSEENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQREGALNSFDAECEILKTIRHRN--LVKIISSCTNHNFKALVLEY 741 (952)
Q Consensus 664 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~e~ 741 (952)
..+.+....+.|..+.||++...+|+.+++|+.... ....+.+|+.+++.+++.+ +.+++++...++..++||||
T Consensus 20 ~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~ 96 (264)
T 1nd4_A 20 FGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGE 96 (264)
T ss_dssp TTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEEC
T ss_pred CCCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEe
Confidence 344443333466679999998877889999997543 2255788999999986444 45688888887888999999
Q ss_pred cCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcC----------------------------------------
Q 002214 742 MPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGH---------------------------------------- 781 (952)
Q Consensus 742 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h---------------------------------------- 781 (952)
++|.++. ... .+ ...++.++++.++.||...
T Consensus 97 i~G~~l~--~~~----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (264)
T 1nd4_A 97 VPGQDLL--SSH----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAP 167 (264)
T ss_dssp CSSEETT--TSC----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCH
T ss_pred cCCcccC--cCc----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccH
Confidence 9998884 211 12 2356778888888885311
Q ss_pred ---------------CCCeEeCCCCCCCeeeCCCCcEEEecccccc
Q 002214 782 ---------------SNPIVHCDIKPSNVLLDDSMVAHLSDFGIAK 812 (952)
Q Consensus 782 ---------------~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~ 812 (952)
..+++|||++|.||+++.++.+.|+|||.|.
T Consensus 168 ~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 168 AELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1239999999999999887667799999875
No 410
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.88 E-value=3.3e-09 Score=117.23 Aligned_cols=142 Identities=14% Similarity=0.220 Sum_probs=107.3
Q ss_pred ccceecCccceEEEEEEeCCCcEEEEEEee--ccC-chhhHHHHHHHHHHHhCC--CCccceeeeEeecC---CeeEEEE
Q 002214 668 EENLIGIGSYGSVYKGRFPDGIEVAIKVFH--LQR-EGALNSFDAECEILKTIR--HRNLVKIISSCTNH---NFKALVL 739 (952)
Q Consensus 668 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~--~~~-~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~---~~~~lv~ 739 (952)
..+.++.|.++.||+.... +..+++|+.. ... ......+.+|+.+++.++ +..+.++++++.+. +..++||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 4567999999999999875 4678888875 322 122356789999999997 45578888888766 4589999
Q ss_pred EccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcC--------------------------------------
Q 002214 740 EYMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGH-------------------------------------- 781 (952)
Q Consensus 740 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h-------------------------------------- 781 (952)
||++|..+.+.. ...++..++..++.++++.|+.||...
T Consensus 121 e~v~G~~l~~~~---~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (359)
T 3dxp_A 121 EFVSGRVLWDQS---LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAM 197 (359)
T ss_dssp ECCCCBCCCCTT---CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHH
T ss_pred EecCCeecCCCc---cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHH
Confidence 999998775421 124678888999999999999998520
Q ss_pred -----------------CCCeEeCCCCCCCeeeCCCCc--EEEeccccccc
Q 002214 782 -----------------SNPIVHCDIKPSNVLLDDSMV--AHLSDFGIAKL 813 (952)
Q Consensus 782 -----------------~~~ivH~Dlk~~Nill~~~~~--~kl~Dfgla~~ 813 (952)
...++|||+++.||+++.++. +.|+||+.+..
T Consensus 198 ~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 198 DSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 257999999999999997753 68999999875
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.87 E-value=7.6e-10 Score=121.13 Aligned_cols=159 Identities=13% Similarity=0.150 Sum_probs=69.2
Q ss_pred cccCCCCcEEEccCccccC---------CCCccccCCCcceEEEeccccccccCCCccCCCCCCcEEeccccccCCcCCc
Q 002214 370 LGRLKKLQGLDLQNNKFEG---------PIPQEFCHFSRLYVVYLNRNKLSGSIPSCLGDLNSLRILSLSSNELTSVIPS 440 (952)
Q Consensus 370 l~~l~~L~~L~L~~N~i~~---------~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 440 (952)
...+++|+.|.+.++.... .....+..+++|+.|+|++|.-. .++. + .+++|+.|+|..|.+......
T Consensus 135 ~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~ 211 (362)
T 2ra8_A 135 KEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVE 211 (362)
T ss_dssp HHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHH
T ss_pred hhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHH
Confidence 3445666666665443210 12223344555666666555211 1122 2 255566666655555432222
Q ss_pred ccc--CCCCCceeEecC--CccCCC-----Cchhh--hcccccceeecCCcccCCCCcccc---cCCCCCceEEccCccc
Q 002214 441 TFW--NLEDILGFDFSS--NSLNGS-----LPLEI--ENLKAVVDIYLSRNNLSGNIPSTI---IGLKNLQHLSLEHNKL 506 (952)
Q Consensus 441 ~~~--~l~~L~~L~Ls~--N~l~~~-----~~~~~--~~l~~L~~L~Ls~N~l~~~~~~~~---~~l~~L~~L~L~~N~l 506 (952)
.+. .+++|+.|+|+. |...+. +...+ ..+++|+.|+|++|.+....+..+ ..+++|++|+|+.|.|
T Consensus 212 ~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L 291 (362)
T 2ra8_A 212 DILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVL 291 (362)
T ss_dssp HHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCC
T ss_pred HHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCC
Confidence 222 455555555542 111100 00111 124455555555555442211111 1345566666666655
Q ss_pred cCc----ccccccccccccEEeCCCCccc
Q 002214 507 QGP----IPESFGELVSLEFLDLSNNDLS 531 (952)
Q Consensus 507 ~~~----~~~~~~~l~~L~~L~Ls~N~l~ 531 (952)
++. ++..+..+++|+.|+|++|.|+
T Consensus 292 ~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 292 TDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp BHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred ChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 532 2222334555666666666554
No 412
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.84 E-value=1.9e-09 Score=118.00 Aligned_cols=161 Identities=18% Similarity=0.217 Sum_probs=113.4
Q ss_pred cccCCCcceEEEecccccc---------ccCCCccCCCCCCcEEeccccccCCcCCccccCCCCCceeEecCCccCCCCc
Q 002214 393 EFCHFSRLYVVYLNRNKLS---------GSIPSCLGDLNSLRILSLSSNELTSVIPSTFWNLEDILGFDFSSNSLNGSLP 463 (952)
Q Consensus 393 ~~~~l~~L~~L~L~~N~l~---------~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 463 (952)
+...+++|+.|.+..+... +.+...+..+|+|+.|+|++|.-....+ + .+++|+.|+|..|.+.....
T Consensus 134 s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l~l~~--~-~~~~L~~L~L~~~~l~~~~l 210 (362)
T 2ra8_A 134 NKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNLSIGK--K-PRPNLKSLEIISGGLPDSVV 210 (362)
T ss_dssp THHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTCBCCS--C-BCTTCSEEEEECSBCCHHHH
T ss_pred hhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCceecc--c-cCCCCcEEEEecCCCChHHH
Confidence 3556789999999765432 1233455678999999999884222322 3 38899999999998875444
Q ss_pred hhhh--cccccceeecCC--cccCCC-----Ccccc--cCCCCCceEEccCccccCcccccc---cccccccEEeCCCCc
Q 002214 464 LEIE--NLKAVVDIYLSR--NNLSGN-----IPSTI--IGLKNLQHLSLEHNKLQGPIPESF---GELVSLEFLDLSNND 529 (952)
Q Consensus 464 ~~~~--~l~~L~~L~Ls~--N~l~~~-----~~~~~--~~l~~L~~L~L~~N~l~~~~~~~~---~~l~~L~~L~Ls~N~ 529 (952)
..+. .+++|+.|+|+. |...+. +...+ ..+++|+.|+|++|.+.+..+..+ ..+++|++|+|+.|.
T Consensus 211 ~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~ 290 (362)
T 2ra8_A 211 EDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGV 290 (362)
T ss_dssp HHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSC
T ss_pred HHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCC
Confidence 4444 689999999864 322111 11123 257999999999999975443333 257899999999999
Q ss_pred cccc----Cccchhccccccccccccccccc
Q 002214 530 LSGV----IPASLEKLLYLKSLNLSFNKLVG 556 (952)
Q Consensus 530 l~~~----~~~~~~~l~~L~~L~l~~N~l~~ 556 (952)
|++. ++..+..+++|+.|+|++|.++.
T Consensus 291 L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 291 LTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp CBHHHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred CChHHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 9864 34445678999999999998763
No 413
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.84 E-value=2e-09 Score=115.90 Aligned_cols=186 Identities=15% Similarity=0.149 Sum_probs=122.5
Q ss_pred cceecCccceEEEEEEeCCCcEEEEEEeeccCchhhHHHHHHHHHHHhCC-CCc--cceeeeEeecCC---eeEEEEEcc
Q 002214 669 ENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQREGALNSFDAECEILKTIR-HRN--LVKIISSCTNHN---FKALVLEYM 742 (952)
Q Consensus 669 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~l~~~~~~~~---~~~lv~e~~ 742 (952)
.+.++.|....||+.. ..+++|+.... .....+.+|+.+++.+. +.. +.++++.....+ ..|+|||++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4568999999999863 56899986432 33467899999999884 332 344555443332 458999999
Q ss_pred CCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhc------------------------------------------
Q 002214 743 PKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFG------------------------------------------ 780 (952)
Q Consensus 743 ~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~------------------------------------------ 780 (952)
+|.++.+.... .++..++..++.++++.++.||..
T Consensus 99 ~G~~l~~~~~~---~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 175 (304)
T 3sg8_A 99 KGVPLTPLLLN---NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDD 175 (304)
T ss_dssp CCEECCHHHHH---TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHH
T ss_pred CCeECCccccc---cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHH
Confidence 99888754332 367777888888888888888741
Q ss_pred -------------CCCCeEeCCCCCCCeeeCC--CCcEEEeccccccccCCcCccccccc----cc---------ccccc
Q 002214 781 -------------HSNPIVHCDIKPSNVLLDD--SMVAHLSDFGIAKLLSEEDSMKQTQT----LA---------TIGYI 832 (952)
Q Consensus 781 -------------h~~~ivH~Dlk~~Nill~~--~~~~kl~Dfgla~~~~~~~~~~~~~~----~~---------~~~y~ 832 (952)
....++|+|++|.||++++ ...+.|+||+.+..-....+...... .+ ..++.
T Consensus 176 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~ 255 (304)
T 3sg8_A 176 FYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHK 255 (304)
T ss_dssp HHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCS
T ss_pred HHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCC
Confidence 1245899999999999998 56688999999875322111100000 00 00111
Q ss_pred c-ccccCcCCcCcccchHhHHHHHHHHHhCCCCC
Q 002214 833 A-PEYGREGQVSIKGDVYNYGIMLMEVFTGMKPT 865 (952)
Q Consensus 833 a-PE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~ 865 (952)
. |+... ......+.|++|.++|.+.+|..+|
T Consensus 256 ~~~~~~~--r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 256 DIPTVLE--KYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp CHHHHHH--HHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CcHHHHH--HHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 1 22111 1122258999999999999998875
No 414
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.73 E-value=2.7e-10 Score=118.00 Aligned_cols=98 Identities=14% Similarity=0.078 Sum_probs=52.7
Q ss_pred CCCCCceEEEeCCCCeEEEEEecC---CCCcccCC-ccccCCcccCeeeccccccccccCC-CcCCcCCCcE--EeCcCC
Q 002214 19 SVCSWMGITCDVYGNRVTSLTISD---LGLAGTIP-SHLGNLSSLQTLVLSRNWFSGTIPK-EIGNLTKLKE--LHLDYN 91 (952)
Q Consensus 19 ~~c~w~~v~c~~~~~~~~~l~l~~---~~~~~~~p-~~l~~l~~L~~L~L~~n~l~~~~p~-~l~~l~~L~~--L~L~~n 91 (952)
..|.|.|++|+..+.+++.+...+ ..+.+.++ +.+..++. +|...+|.-++.++- .+...+.|+. ++++.|
T Consensus 76 ~l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N 153 (267)
T 3rw6_A 76 ALKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLN 153 (267)
T ss_dssp HHHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTT
T ss_pred HHHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCC
Confidence 479999999998777887665544 12222332 23333333 344444544433332 2455555655 666666
Q ss_pred ccc---ccCChhhcCCCCCCeEeecCccCc
Q 002214 92 KLQ---GEIPEELGNLAELEMLVLNNNLLT 118 (952)
Q Consensus 92 ~l~---~~~p~~l~~l~~L~~L~L~~n~l~ 118 (952)
+.. ..++....++++|+.|+|++|+|+
T Consensus 154 ~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~ 183 (267)
T 3rw6_A 154 RRSCMAATLRIIEENIPELLSLNLSNNRLY 183 (267)
T ss_dssp SHHHHHHHHHHHHHHCTTCCEEECTTSCCC
T ss_pred HHHHHHHHHHHHHhhCCCCCEEECCCCCCC
Confidence 443 111222245666666666666665
No 415
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.50 E-value=4.2e-07 Score=98.34 Aligned_cols=137 Identities=16% Similarity=0.212 Sum_probs=101.6
Q ss_pred cCCccceecCccceEEEEEEeCCCcEEEEEEeeccCchhhHHHHHHHHHHHhCCC----CccceeeeEeecCCeeEEEEE
Q 002214 665 QFSEENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQREGALNSFDAECEILKTIRH----RNLVKIISSCTNHNFKALVLE 740 (952)
Q Consensus 665 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~~~~~~~~lv~e 740 (952)
.+...+.++.|....||+. |+.+++|+.... .....+.+|+.+++.+.+ ..+.+++++ +..++|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence 5666788999999999998 677899976432 223568899999999865 223445544 45789999
Q ss_pred ccCCCChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcC---------------------------------------
Q 002214 741 YMPKGSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGH--------------------------------------- 781 (952)
Q Consensus 741 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h--------------------------------------- 781 (952)
|++|.++..... ..++..++..++.++++.++.||...
T Consensus 108 ~i~G~~l~~~~~---~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (320)
T 3r70_A 108 YIKGERITYEQY---HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDE 184 (320)
T ss_dssp CCCCBCCCHHHH---TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHH
T ss_pred ecCCcccccccc---ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccccccc
Confidence 999998864322 13566777778888888888887321
Q ss_pred ---------------------CCCeEeCCCCCCCeeeCCCCcEEEecccccccc
Q 002214 782 ---------------------SNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLL 814 (952)
Q Consensus 782 ---------------------~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~ 814 (952)
...++|+|++|.||+++.+..+.|+||+.+..-
T Consensus 185 ~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 185 MLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred chHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 234599999999999999767899999998653
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.45 E-value=1.6e-08 Score=99.79 Aligned_cols=44 Identities=14% Similarity=0.191 Sum_probs=25.3
Q ss_pred ccccCCCCCcEEEc--cCCccccc----CCccccccCCccEEEeeCCcCC
Q 002214 173 NNLWHCKELSSVSL--SYNQFTGR----LPRDLGNSTKLKSLDLGFNNLN 216 (952)
Q Consensus 173 ~~l~~l~~L~~L~L--~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~ 216 (952)
..+...++|++|+| ++|.|+.. +...+...++|++|+|++|.+.
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 34444455666666 55665532 2334445567777777777764
No 417
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.44 E-value=3.5e-08 Score=102.08 Aligned_cols=80 Identities=29% Similarity=0.348 Sum_probs=54.0
Q ss_pred hcccccceeecCCcccCCC--CcccccCCCCCceEEccCccccCcccccccccc--cccEEeCCCCcccccCc-------
Q 002214 467 ENLKAVVDIYLSRNNLSGN--IPSTIIGLKNLQHLSLEHNKLQGPIPESFGELV--SLEFLDLSNNDLSGVIP------- 535 (952)
Q Consensus 467 ~~l~~L~~L~Ls~N~l~~~--~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~--~L~~L~Ls~N~l~~~~~------- 535 (952)
.++++|+.|+|++|+|+++ +|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|++.+..|
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 4567777777777777763 345566778888888888888754 2334444 78888888888876444
Q ss_pred cchhccccccccc
Q 002214 536 ASLEKLLYLKSLN 548 (952)
Q Consensus 536 ~~~~~l~~L~~L~ 548 (952)
..+..+|+|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 2356677777664
No 418
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.41 E-value=1.4e-06 Score=92.27 Aligned_cols=77 Identities=14% Similarity=0.127 Sum_probs=61.7
Q ss_pred CccceecCccceEEEEEEeCCCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCC---ccceeeeEeecCCeeEEEEEccC
Q 002214 667 SEENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQREGALNSFDAECEILKTIRHR---NLVKIISSCTNHNFKALVLEYMP 743 (952)
Q Consensus 667 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~lv~e~~~ 743 (952)
...+.|+.|.++.||++...+|+.++||+...........+.+|++.++.+++. .+.+++++. ..++||||++
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~ 93 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVD 93 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCC
T ss_pred cceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecc
Confidence 345789999999999999888999999997543333346789999999999765 567777764 3689999999
Q ss_pred CCCh
Q 002214 744 KGSL 747 (952)
Q Consensus 744 ~g~L 747 (952)
++++
T Consensus 94 g~~~ 97 (288)
T 3d1u_A 94 ERPP 97 (288)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 9875
No 419
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.38 E-value=1.6e-06 Score=91.33 Aligned_cols=135 Identities=17% Similarity=0.119 Sum_probs=96.5
Q ss_pred eecCccce-EEEEEEeC-CCcEEEEEEeeccCchhhHHHHHHHHHHHhCC-CCccceeeeEeecCCeeEEEEEccCCCCh
Q 002214 671 LIGIGSYG-SVYKGRFP-DGIEVAIKVFHLQREGALNSFDAECEILKTIR-HRNLVKIISSCTNHNFKALVLEYMPKGSL 747 (952)
Q Consensus 671 ~lg~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~g~L 747 (952)
.+..|..| .||+.... ++..+++|+.... ....+.+|+..++.+. +-.|.++++++.+.+..++|||+++|.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 44555555 68988764 4678999986533 3467889999999884 33467788899888999999999999887
Q ss_pred hHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh------------------------------------------------
Q 002214 748 EDCMYASNFNLDIFQRLGIMIDVASALEYLHF------------------------------------------------ 779 (952)
Q Consensus 748 ~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~------------------------------------------------ 779 (952)
.+..... ......+..++++.++.||.
T Consensus 108 ~~~~~~~-----~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (272)
T 4gkh_A 108 FQVLEEY-----PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKE 182 (272)
T ss_dssp HHHHHHC-----GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHH
T ss_pred cccccCC-----HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHH
Confidence 7654321 12233455566666666652
Q ss_pred -------cCCCCeEeCCCCCCCeeeCCCCcEEEeccccccc
Q 002214 780 -------GHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKL 813 (952)
Q Consensus 780 -------~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~ 813 (952)
.+...++|+|+.+.||+++.++.+-|+||+.+..
T Consensus 183 l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 183 MHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 1122378999999999999887778999998863
No 420
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.37 E-value=2.2e-06 Score=91.88 Aligned_cols=136 Identities=13% Similarity=0.099 Sum_probs=95.7
Q ss_pred cceecCccceEEEEEEeCCCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCC---ccceeeeEee-cCCeeEEEEEccCC
Q 002214 669 ENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQREGALNSFDAECEILKTIRHR---NLVKIISSCT-NHNFKALVLEYMPK 744 (952)
Q Consensus 669 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~-~~~~~~lv~e~~~~ 744 (952)
.+.++.|....||+. |..+++|+.. .......+.+|+++++.+++. .+.+++.++. ..+..++||||++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 456888888899987 5678899853 223346789999999999642 3556666664 45667899999999
Q ss_pred CChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhc--------------------------------------------
Q 002214 745 GSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFG-------------------------------------------- 780 (952)
Q Consensus 745 g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~-------------------------------------------- 780 (952)
.++.+.... .++..++..++.++++.++.||..
T Consensus 98 ~~l~~~~~~---~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 174 (306)
T 3tdw_A 98 QILGEDGMA---VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTL 174 (306)
T ss_dssp EECHHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHH
T ss_pred eECchhhhh---hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHH
Confidence 888763211 234455555555555555555521
Q ss_pred -------------CCCCeEeCCCCCCCeeeCC---CCc-EEEeccccccc
Q 002214 781 -------------HSNPIVHCDIKPSNVLLDD---SMV-AHLSDFGIAKL 813 (952)
Q Consensus 781 -------------h~~~ivH~Dlk~~Nill~~---~~~-~kl~Dfgla~~ 813 (952)
....++|+|++|.||+++. ++. +.|+||+.+..
T Consensus 175 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 175 RFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 3345799999999999987 455 58999998864
No 421
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.36 E-value=7.6e-08 Score=94.89 Aligned_cols=114 Identities=11% Similarity=0.122 Sum_probs=54.9
Q ss_pred cCCCCCCcEEecccc-ccCCc----CCccccCCCCCceeEecCCccCCC----CchhhhcccccceeecCCcccCCC---
Q 002214 418 LGDLNSLRILSLSSN-ELTSV----IPSTFWNLEDILGFDFSSNSLNGS----LPLEIENLKAVVDIYLSRNNLSGN--- 485 (952)
Q Consensus 418 ~~~l~~L~~L~L~~N-~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~--- 485 (952)
+...++|++|+|++| .|... +...+...++|+.|+|++|.|... +...+...+.|++|+|++|.|...
T Consensus 32 l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~ 111 (185)
T 1io0_A 32 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGIL 111 (185)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHH
T ss_pred HhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHH
Confidence 344455555555555 44421 112233344555555555554421 222333445556666666655532
Q ss_pred -CcccccCCCCCceEEc--cCccccCc----ccccccccccccEEeCCCCccc
Q 002214 486 -IPSTIIGLKNLQHLSL--EHNKLQGP----IPESFGELVSLEFLDLSNNDLS 531 (952)
Q Consensus 486 -~~~~~~~l~~L~~L~L--~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~ 531 (952)
+...+...++|++|+| ++|.|+.. +...+...++|+.|+|++|.+.
T Consensus 112 ~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 112 ALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 2334444556666666 55666532 2233344456666666666654
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.22 E-value=4.4e-06 Score=91.72 Aligned_cols=143 Identities=12% Similarity=0.144 Sum_probs=92.1
Q ss_pred CCccceecCccceEEEEEEeCCCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCc--cceeeeEeecC-CeeEEEEEcc
Q 002214 666 FSEENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQREGALNSFDAECEILKTIRHRN--LVKIISSCTNH-NFKALVLEYM 742 (952)
Q Consensus 666 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~-~~~~lv~e~~ 742 (952)
....+.++.|....+|+... +|+.+++|+.... ..+.+|+.+++.+.... +.++++++... +..++||||+
T Consensus 43 ~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l 116 (362)
T 3ovc_A 43 VSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRA 116 (362)
T ss_dssp CEEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECC
T ss_pred CceEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEec
Confidence 33456789999999999886 6889999987432 35788999999986533 45677776654 6789999999
Q ss_pred CCCChhHH------------------hhhcCC----C------------CCHHHH---------------------HHHH
Q 002214 743 PKGSLEDC------------------MYASNF----N------------LDIFQR---------------------LGIM 767 (952)
Q Consensus 743 ~~g~L~~~------------------l~~~~~----~------------l~~~~~---------------------~~i~ 767 (952)
+|.++.+. ++.... . -+|... ....
T Consensus 117 ~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 196 (362)
T 3ovc_A 117 QGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVA 196 (362)
T ss_dssp CSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHH
T ss_pred CCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccch
Confidence 98665421 011000 0 001111 0111
Q ss_pred HHHHHHHHHHHh-cCCCCeEeCCCCCCCeeeCCCCcEEEecccccccc
Q 002214 768 IDVASALEYLHF-GHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLL 814 (952)
Q Consensus 768 ~~ia~~l~~Lh~-~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~ 814 (952)
..+....+++.. .....++|+|+.+.||+++.++.+.|+||+.+..-
T Consensus 197 ~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 197 QALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 112222223321 11256899999999999988878889999999754
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.16 E-value=2.8e-06 Score=93.48 Aligned_cols=81 Identities=10% Similarity=0.026 Sum_probs=57.4
Q ss_pred ccee-cCccceEEEEEEeC-------CCcEEEEEEeeccC---chhhHHHHHHHHHHHhCC-C--CccceeeeEeecC--
Q 002214 669 ENLI-GIGSYGSVYKGRFP-------DGIEVAIKVFHLQR---EGALNSFDAECEILKTIR-H--RNLVKIISSCTNH-- 732 (952)
Q Consensus 669 ~~~l-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~~-- 732 (952)
.+.| +.|....+|+.... +++.+++|+..... ......+.+|+.+++.++ + -.+.++++++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 4567 88989999998764 26789999875432 101245788999998884 2 3567788877655
Q ss_pred -CeeEEEEEccCCCChhH
Q 002214 733 -NFKALVLEYMPKGSLED 749 (952)
Q Consensus 733 -~~~~lv~e~~~~g~L~~ 749 (952)
+..++||||++|..+.+
T Consensus 105 ~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TSSCEEEEECCCCBCCCB
T ss_pred cCCceEEEEecCCCChhh
Confidence 45789999999877653
No 424
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.98 E-value=3.2e-05 Score=86.34 Aligned_cols=75 Identities=16% Similarity=0.074 Sum_probs=50.1
Q ss_pred cceecCccceEEEEEEeC-CCcEEEEEEeeccCc-------hhhHHHHHHHHHHHhCCC--Ccc-ceeeeEeecCCeeEE
Q 002214 669 ENLIGIGSYGSVYKGRFP-DGIEVAIKVFHLQRE-------GALNSFDAECEILKTIRH--RNL-VKIISSCTNHNFKAL 737 (952)
Q Consensus 669 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h--~ni-v~l~~~~~~~~~~~l 737 (952)
.+.+|.|..+.||++... +++.|+||....... ....++..|+++++.+.. |.. .+++.+. .+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--CCccEE
Confidence 568999999999999764 468899997643211 123567889999988742 433 3555443 344689
Q ss_pred EEEccCCC
Q 002214 738 VLEYMPKG 745 (952)
Q Consensus 738 v~e~~~~g 745 (952)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
No 425
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.94 E-value=5.1e-06 Score=79.43 Aligned_cols=82 Identities=9% Similarity=0.056 Sum_probs=37.7
Q ss_pred CCcEEEccCCcccccCCccccccCCccEEEeeCCc-CCccCchhhhcc----CCCcEeeecccc-ccccCCccccCCCCc
Q 002214 180 ELSSVSLSYNQFTGRLPRDLGNSTKLKSLDLGFNN-LNGEIPQEIGNL----RNLEILGIDQSN-LVGFVPDTIFNISTL 253 (952)
Q Consensus 180 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~L~~n~-~~~~~~~~~~~l~~L 253 (952)
+|+.||++++.|+..--..+.++++|++|+|++|. +++..-..+..+ ++|+.|+|++|. ++...-..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 45555555555544333444555555555555553 443333334432 245555555542 333322333344444
Q ss_pred cEEEeeCc
Q 002214 254 KILSLFNN 261 (952)
Q Consensus 254 ~~L~Ls~N 261 (952)
+.|+|++|
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 44444444
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.86 E-value=6.6e-06 Score=78.70 Aligned_cols=85 Identities=7% Similarity=0.013 Sum_probs=69.3
Q ss_pred CccceEEcccCcccccCCccccCCCCCcEEEccCCc-ccccCCcccccc----CCccEEEeeCCc-CCccCchhhhccCC
Q 002214 155 PRLKGLYVSYNQFKGPIPNNLWHCKELSSVSLSYNQ-FTGRLPRDLGNS----TKLKSLDLGFNN-LNGEIPQEIGNLRN 228 (952)
Q Consensus 155 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~N~-l~~~~~~~~~~l----~~L~~L~L~~N~-l~~~~p~~~~~l~~ 228 (952)
.+|++|||++|.++...-..+..+++|+.|+|++|. |++.--..++.+ ++|++|+|++|. +++..-..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 379999999999887666778889999999999995 775544555554 379999999985 88766778899999
Q ss_pred CcEeeeccccc
Q 002214 229 LEILGIDQSNL 239 (952)
Q Consensus 229 L~~L~L~~n~~ 239 (952)
|+.|+|++|.-
T Consensus 141 L~~L~L~~c~~ 151 (176)
T 3e4g_A 141 LKYLFLSDLPG 151 (176)
T ss_dssp CCEEEEESCTT
T ss_pred CCEEECCCCCC
Confidence 99999998853
No 427
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.84 E-value=7.9e-05 Score=81.23 Aligned_cols=138 Identities=17% Similarity=0.169 Sum_probs=80.1
Q ss_pred ceecCccceEEEEEEeCCCcEEEEEEeeccCchhhHHHHHHHHHHHhCCC--Cccceeee------EeecCCeeEEEEEc
Q 002214 670 NLIGIGSYGSVYKGRFPDGIEVAIKVFHLQREGALNSFDAECEILKTIRH--RNLVKIIS------SCTNHNFKALVLEY 741 (952)
Q Consensus 670 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~------~~~~~~~~~lv~e~ 741 (952)
+.|+.|..+.||+....+| .+++|+.... . ..+..|+.+++.+.. -.+.+++. +....+..++||||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~-~---~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP-E---KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC-H---HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC-H---HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 4566677899999987555 5999988642 1 334456666665531 12333333 12345678899999
Q ss_pred cCCCChh-----H---------Hhhh--cCC-----------CCCHHHHH------------------------------
Q 002214 742 MPKGSLE-----D---------CMYA--SNF-----------NLDIFQRL------------------------------ 764 (952)
Q Consensus 742 ~~~g~L~-----~---------~l~~--~~~-----------~l~~~~~~------------------------------ 764 (952)
++|..+. . .++. ... ...|....
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9986542 0 0111 000 01222110
Q ss_pred -HHHHHHHHHHHHHHh----------cCCCCeEeCCCCCCCeeeCCCCcEEEecccccc
Q 002214 765 -GIMIDVASALEYLHF----------GHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAK 812 (952)
Q Consensus 765 -~i~~~ia~~l~~Lh~----------~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~ 812 (952)
.+...+.+++++|+. .....++|||+.+.||+++.++.+.|+||+.+.
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 111123345666642 135789999999999999888899999999775
No 428
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.78 E-value=3.4e-05 Score=86.71 Aligned_cols=81 Identities=9% Similarity=0.059 Sum_probs=51.4
Q ss_pred CCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcCcccccccccccccccccccCcC---CcCcccchHhHHHHHHH
Q 002214 781 HSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEEDSMKQTQTLATIGYIAPEYGREG---QVSIKGDVYNYGIMLME 857 (952)
Q Consensus 781 h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slG~~l~e 857 (952)
+...++|||++|.||+++.++ ++++||+.+..-...-+.......-...|.+|+..... ......++......+|+
T Consensus 230 ~~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
T 2pyw_A 230 RAQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN 308 (420)
T ss_dssp BCCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred CCCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence 577899999999999999876 99999999975422111111000012346676654321 12233556688888888
Q ss_pred HHhCC
Q 002214 858 VFTGM 862 (952)
Q Consensus 858 l~tg~ 862 (952)
.+++.
T Consensus 309 ~y~~~ 313 (420)
T 2pyw_A 309 LFNKR 313 (420)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88753
No 429
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.76 E-value=0.00014 Score=77.48 Aligned_cols=137 Identities=13% Similarity=0.076 Sum_probs=92.8
Q ss_pred ccceecCccceEEEEEEeCCCcEEEEEEeeccCchhhHHHHHHHHHHHhCC---CCccceeeeEeecCCeeEEEEEccCC
Q 002214 668 EENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQREGALNSFDAECEILKTIR---HRNLVKIISSCTNHNFKALVLEYMPK 744 (952)
Q Consensus 668 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv~e~~~~ 744 (952)
..+.|+.|....+|+... ++..+++|+.... ....+.+|+..++.+. ...+.++++++...+..++||||+++
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G 115 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK 115 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence 346789999999999986 5778999987543 2467889999999884 35688888888888889999999998
Q ss_pred CChhH-----------HhhhcCC---------------------CCCHHHHH---HHHH----------------HHHHH
Q 002214 745 GSLED-----------CMYASNF---------------------NLDIFQRL---GIMI----------------DVASA 773 (952)
Q Consensus 745 g~L~~-----------~l~~~~~---------------------~l~~~~~~---~i~~----------------~ia~~ 773 (952)
..+.. .++.... .-+|.... ++.. .+.+.
T Consensus 116 ~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~ 195 (312)
T 3jr1_A 116 SKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQI 195 (312)
T ss_dssp CCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 86521 1222110 12454321 1111 11111
Q ss_pred -HHHHHh-cCCCCeEeCCCCCCCeeeCCCCcEEEeccc
Q 002214 774 -LEYLHF-GHSNPIVHCDIKPSNVLLDDSMVAHLSDFG 809 (952)
Q Consensus 774 -l~~Lh~-~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfg 809 (952)
.+.|.. .....++|+|+.+.|++++.++ +.|.||+
T Consensus 196 l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 196 VADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 223311 1246799999999999999887 8899974
No 430
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.68 E-value=0.00015 Score=76.75 Aligned_cols=79 Identities=14% Similarity=0.132 Sum_probs=59.2
Q ss_pred cCCccceecCccceEEEEEEeCCCcEEEEEEeeccCchhhHHHHHHHHHHHhCCC---CccceeeeEeecCCeeEEEEEc
Q 002214 665 QFSEENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQREGALNSFDAECEILKTIRH---RNLVKIISSCTNHNFKALVLEY 741 (952)
Q Consensus 665 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~l~~~~~~~~~~~lv~e~ 741 (952)
+...++.+|.|..+.||+.+..+|+.|+||+...........|.+|+..|+.+.- -.+.+++++. ..++||||
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~ 91 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEW 91 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEEC
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEe
Confidence 4555678999999999999999999999998765544444678899999998842 2344555442 24799999
Q ss_pred cCCCCh
Q 002214 742 MPKGSL 747 (952)
Q Consensus 742 ~~~g~L 747 (952)
++++..
T Consensus 92 l~~~~~ 97 (288)
T 3f7w_A 92 VDERPP 97 (288)
T ss_dssp CCCCCC
T ss_pred ecccCC
Confidence 987754
No 431
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.33 E-value=0.0002 Score=65.35 Aligned_cols=60 Identities=23% Similarity=0.322 Sum_probs=37.0
Q ss_pred eEEccCcccc-CcccccccccccccEEeCCCCcccccCccchhcccccccccccccccccCCC
Q 002214 498 HLSLEHNKLQ-GPIPESFGELVSLEFLDLSNNDLSGVIPASLEKLLYLKSLNLSFNKLVGEIP 559 (952)
Q Consensus 498 ~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 559 (952)
.++.+++.++ ..+|..+. ++|+.|+|++|+|+.+.+..|..+++|+.|+|++|+|.|.+-
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC~ 72 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDCR 72 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSGG
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccCc
Confidence 4556666654 12332221 356777777777776666667777777777777777776554
No 432
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.33 E-value=0.0005 Score=74.05 Aligned_cols=156 Identities=15% Similarity=0.178 Sum_probs=89.2
Q ss_pred cCHHHHHHHhccCCc-----cceecCccceEEEEEEeCCCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCc--cceee
Q 002214 654 YSHDELLRATDQFSE-----ENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQREGALNSFDAECEILKTIRHRN--LVKII 726 (952)
Q Consensus 654 ~~~~~~~~~~~~~~~-----~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~ 726 (952)
.+.+++.....+|.. .+.|+.|....+|+....+| .+++|+..... ....+..|+.+++.++..+ +.+++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~ 83 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPL 83 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCccc
Confidence 455666666666655 24567788899999987655 68899886421 1245667888887774222 23333
Q ss_pred eE------eecCCeeEEEEEccCCCChhH-----H---------hhhc--C--CC----C---CHHHHHH----------
Q 002214 727 SS------CTNHNFKALVLEYMPKGSLED-----C---------MYAS--N--FN----L---DIFQRLG---------- 765 (952)
Q Consensus 727 ~~------~~~~~~~~lv~e~~~~g~L~~-----~---------l~~~--~--~~----l---~~~~~~~---------- 765 (952)
.. ....+..+++|+|++|..+.. + ++.. . .. . .|.....
T Consensus 84 ~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 163 (322)
T 2ppq_A 84 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE 163 (322)
T ss_dssp CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred CCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhh
Confidence 21 122356789999998865421 0 1111 0 00 1 1221110
Q ss_pred --HHHHHHHHHHHHHh----cCCCCeEeCCCCCCCeeeCCCCcEEEecccccc
Q 002214 766 --IMIDVASALEYLHF----GHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAK 812 (952)
Q Consensus 766 --i~~~ia~~l~~Lh~----~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~ 812 (952)
+...+.+.++++.. ....+++|+|+.+.||+++.++.+.|+||+.+.
T Consensus 164 ~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 164 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 00113344555532 124579999999999999987667899999875
No 433
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.20 E-value=0.0001 Score=71.83 Aligned_cols=38 Identities=24% Similarity=0.365 Sum_probs=17.9
Q ss_pred CCCcEEeCcCC-cccc----cCChhhcCCCCCCeEeecCccCc
Q 002214 81 TKLKELHLDYN-KLQG----EIPEELGNLAELEMLVLNNNLLT 118 (952)
Q Consensus 81 ~~L~~L~L~~n-~l~~----~~p~~l~~l~~L~~L~L~~n~l~ 118 (952)
+.|++|+|++| .|.. .+.+++..-+.|++|+|++|++.
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~ig 83 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAIS 83 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCB
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCC
Confidence 44555555543 4431 23344444555555555555554
No 434
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.20 E-value=8.2e-05 Score=72.53 Aligned_cols=64 Identities=16% Similarity=0.168 Sum_probs=34.3
Q ss_pred CCccceEEcccC-cccc----cCCccccCCCCCcEEEccCCcccccCC----ccccccCCccEEEeeCCcCCc
Q 002214 154 LPRLKGLYVSYN-QFKG----PIPNNLWHCKELSSVSLSYNQFTGRLP----RDLGNSTKLKSLDLGFNNLNG 217 (952)
Q Consensus 154 l~~L~~L~L~~n-~l~~----~~~~~l~~l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~L~~N~l~~ 217 (952)
-+.|++|+|++| +|.. .+.+.+..-..|+.|+|++|+|..... +.+..-+.|++|+|++|.|.+
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~ 112 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTP 112 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCH
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCH
Confidence 346667777664 5542 123344445566666666666653322 223344566666666666653
No 435
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.19 E-value=0.0022 Score=69.18 Aligned_cols=158 Identities=13% Similarity=0.106 Sum_probs=92.1
Q ss_pred cccCHHHHHHHhccCCc-----cceecCccceEEEEEEeCCCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCc--cce
Q 002214 652 RRYSHDELLRATDQFSE-----ENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQREGALNSFDAECEILKTIRHRN--LVK 724 (952)
Q Consensus 652 ~~~~~~~~~~~~~~~~~-----~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~ 724 (952)
...+.+.+......|.+ .+.++ |....||+....+|+.+++|+...... ....+..|..+++.++... +.+
T Consensus 9 ~~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~-~~~~~~~E~~~~~~L~~~g~~vp~ 86 (328)
T 1zyl_A 9 QTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPERW-TADQILEEHQFALQLVNDEVPVAA 86 (328)
T ss_dssp CCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTTS-CHHHHHHHHHHHHHHHHTTCSBCC
T ss_pred CCCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCCC-CHHHHHHHHHHHHHHHHcCCeecc
Confidence 34556666666555533 24566 888899998877788899999864321 2356677888888774222 344
Q ss_pred eeeE-----eecCCeeEEEEEccCCCChh-----HH---------hhh----c----CCCCCHHHH--------------
Q 002214 725 IISS-----CTNHNFKALVLEYMPKGSLE-----DC---------MYA----S----NFNLDIFQR-------------- 763 (952)
Q Consensus 725 l~~~-----~~~~~~~~lv~e~~~~g~L~-----~~---------l~~----~----~~~l~~~~~-------------- 763 (952)
++.. ....+..++||||++|..+. .. ++. . ....++...
T Consensus 87 ~~~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 166 (328)
T 1zyl_A 87 PVAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLI 166 (328)
T ss_dssp CCCBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSS
T ss_pred eeecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcC
Confidence 4443 12245668899999875432 11 111 0 011222211
Q ss_pred --------HHHHHHHHHHHHHHHh-cCCCCeEeCCCCCCCeeeCCCCcEEEeccccccc
Q 002214 764 --------LGIMIDVASALEYLHF-GHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKL 813 (952)
Q Consensus 764 --------~~i~~~ia~~l~~Lh~-~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~ 813 (952)
...+..+...++.... .....++|||+++.||+++ + .+.++||+.+..
T Consensus 167 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 167 PSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 0111112222222210 1345689999999999999 4 899999998763
No 436
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=97.18 E-value=0.0014 Score=63.90 Aligned_cols=103 Identities=13% Similarity=0.030 Sum_probs=69.2
Q ss_pred CChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEeccccccccCCcCcccccc
Q 002214 745 GSLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAKLLSEEDSMKQTQ 824 (952)
Q Consensus 745 g~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~ 824 (952)
-+|.+++...+.++++.++|.+..|.+.+|.-.-. ++.-..+=+.|..|++..+|.+...+ +.+.
T Consensus 33 vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~--~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~------------ 97 (229)
T 2yle_A 33 LSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAAR--RRQPRHRVRSAAQIRVWRDGAVTLAP-AADD------------ 97 (229)
T ss_dssp EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred ccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhh--cccCCceecCCcceEEecCCceeccc-cccc------------
Confidence 37999999999999999999999999999877631 11111233456889999999988753 1110
Q ss_pred cccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCC
Q 002214 825 TLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKP 864 (952)
Q Consensus 825 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p 864 (952)
.....+.|||... ...+.+.=|||+|+++|..+--..|
T Consensus 98 -~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 -AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred -ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 0223466888764 3556788999999999999885444
No 437
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.13 E-value=0.0024 Score=68.98 Aligned_cols=139 Identities=14% Similarity=0.111 Sum_probs=74.7
Q ss_pred ceecCccceE-EEEEEeCCCcEEEEEEeeccCchhhHHHHHHHHHHHhCCC--CccceeeeEeecCCeeEEEEEccCCCC
Q 002214 670 NLIGIGSYGS-VYKGRFPDGIEVAIKVFHLQREGALNSFDAECEILKTIRH--RNLVKIISSCTNHNFKALVLEYMPKGS 746 (952)
Q Consensus 670 ~~lg~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~~g~ 746 (952)
+.++.|+... +|+....+|+.+++|....... ..+..|+.+++.+.. -.+.+++.+..+.+ +++||++.+..
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 3465555444 6777664477788886543321 234567777777642 23456666644444 78999997766
Q ss_pred hhHHhhhc---------------------C----CCCCHHHHH---------H-----------HHHHHHHHHHHHH---
Q 002214 747 LEDCMYAS---------------------N----FNLDIFQRL---------G-----------IMIDVASALEYLH--- 778 (952)
Q Consensus 747 L~~~l~~~---------------------~----~~l~~~~~~---------~-----------i~~~ia~~l~~Lh--- 778 (952)
+.+.+... . ..++..... . ....+...++.+.
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 64332210 0 012211100 0 0001111222221
Q ss_pred hcCCCCeEeCCCCCCCeeeCCC----CcEEEeccccccc
Q 002214 779 FGHSNPIVHCDIKPSNVLLDDS----MVAHLSDFGIAKL 813 (952)
Q Consensus 779 ~~h~~~ivH~Dlk~~Nill~~~----~~~kl~Dfgla~~ 813 (952)
..+...++|||+.+.||+++.+ +.+.|+||+.+..
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 1245679999999999999875 6899999998874
No 438
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.01 E-value=0.0018 Score=70.77 Aligned_cols=140 Identities=14% Similarity=0.165 Sum_probs=82.8
Q ss_pred cceecCccceEEEEEEeC--------CCcEEEEEEeeccCchhhHHHHHHHHHHHhCC-CCccceeeeEeecCCeeEEEE
Q 002214 669 ENLIGIGSYGSVYKGRFP--------DGIEVAIKVFHLQREGALNSFDAECEILKTIR-HRNLVKIISSCTNHNFKALVL 739 (952)
Q Consensus 669 ~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 739 (952)
.+.+..|-...+|+.... +++.|++|+..... .......+|.++++.+. +.-..++++++.+ .+||
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~-~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL-QGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc-chHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 356777888889999874 35789999873322 22455678999998884 3333566666543 2999
Q ss_pred EccCCCChhHH-----------------hhhcC----CCCC--HHHHHHHHHHHHH-------------------HHHHH
Q 002214 740 EYMPKGSLEDC-----------------MYASN----FNLD--IFQRLGIMIDVAS-------------------ALEYL 777 (952)
Q Consensus 740 e~~~~g~L~~~-----------------l~~~~----~~l~--~~~~~~i~~~ia~-------------------~l~~L 777 (952)
||++|.++... ++... .... +.+..++..++.. .++.|
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 99998665311 11111 1122 3344444433321 12233
Q ss_pred H-----hcCCCCeEeCCCCCCCeeeCCC----CcEEEeccccccc
Q 002214 778 H-----FGHSNPIVHCDIKPSNVLLDDS----MVAHLSDFGIAKL 813 (952)
Q Consensus 778 h-----~~h~~~ivH~Dlk~~Nill~~~----~~~kl~Dfgla~~ 813 (952)
. ......++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 2 1234568999999999999876 7899999998863
No 439
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.95 E-value=0.00071 Score=72.05 Aligned_cols=136 Identities=12% Similarity=0.108 Sum_probs=76.2
Q ss_pred cceecCccceEEEEEEeCCCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCcc-ceeeeEeecCCeeEEEEEcc-CCCC
Q 002214 669 ENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNL-VKIISSCTNHNFKALVLEYM-PKGS 746 (952)
Q Consensus 669 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~-~~g~ 746 (952)
.+.|+.|....+|+. ..+++|+....... .....+|+.+++.+...++ .++++++. +.-++++||+ ++.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~~--~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVDP--ATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEECT--TTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEEC--CCCEEEEeecCCCcc
Confidence 678999999999998 56889987643222 1223568888887743233 45555443 3346899999 6655
Q ss_pred hhHH------------------hhhcCCC----CCHHHH-HHH------------------HHHHHHHHHHHH-hcCCCC
Q 002214 747 LEDC------------------MYASNFN----LDIFQR-LGI------------------MIDVASALEYLH-FGHSNP 784 (952)
Q Consensus 747 L~~~------------------l~~~~~~----l~~~~~-~~i------------------~~~ia~~l~~Lh-~~h~~~ 784 (952)
+... ++..... .+.... ... ...+....+.+. ......
T Consensus 95 l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~ 174 (301)
T 3dxq_A 95 MSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPLA 174 (301)
T ss_dssp CCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCCCE
T ss_pred CCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCce
Confidence 4321 0111100 111110 000 000111111111 113345
Q ss_pred eEeCCCCCCCeeeCCCCcEEEeccccccc
Q 002214 785 IVHCDIKPSNVLLDDSMVAHLSDFGIAKL 813 (952)
Q Consensus 785 ivH~Dlk~~Nill~~~~~~kl~Dfgla~~ 813 (952)
++|+|+.+.||+ ..++.+.++||..|..
T Consensus 175 l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 175 ACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp EECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred eeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 899999999999 5667789999998874
No 440
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.95 E-value=0.0015 Score=73.19 Aligned_cols=73 Identities=21% Similarity=0.292 Sum_probs=50.2
Q ss_pred cceecCccceEEEEEEeCC--------CcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCcc-ceeeeEeecCCeeEEEE
Q 002214 669 ENLIGIGSYGSVYKGRFPD--------GIEVAIKVFHLQREGALNSFDAECEILKTIRHRNL-VKIISSCTNHNFKALVL 739 (952)
Q Consensus 669 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~ 739 (952)
.+.|+.|....||+....+ ++.|++|+...... ...+.+|..+++.+...++ .++++.+.+ .+|+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~--~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET--ESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC--HHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc--HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 4578888889999998753 57899999843211 1445579999988853333 566666542 3899
Q ss_pred EccCCCCh
Q 002214 740 EYMPKGSL 747 (952)
Q Consensus 740 e~~~~g~L 747 (952)
||++|.++
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99986444
No 441
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.80 E-value=0.0043 Score=69.70 Aligned_cols=74 Identities=18% Similarity=0.144 Sum_probs=48.9
Q ss_pred cceecCccceEEEEEEeCC-CcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCcc-ceeeeEeecCCeeEEEEEccCCCC
Q 002214 669 ENLIGIGSYGSVYKGRFPD-GIEVAIKVFHLQREGALNSFDAECEILKTIRHRNL-VKIISSCTNHNFKALVLEYMPKGS 746 (952)
Q Consensus 669 ~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~~g~ 746 (952)
.+.|+.|-...+|+....+ +..+++|+........ ..-.+|..+++.+...++ .++++++. . ..||||++|.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~-idR~~E~~vl~~L~~~gl~P~ll~~~~-~---G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI-INREREKKISCILYNKNIAKKIYVFFT-N---GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC-SCHHHHHHHHHHHTTSSSBCCEEEEET-T---EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh-cCHHHHHHHHHHHHhcCCCCCEEEEeC-C---eEEEEeeCCcc
Confidence 4578888889999998865 5789999875432221 112589999999865444 46676663 2 35999998755
Q ss_pred h
Q 002214 747 L 747 (952)
Q Consensus 747 L 747 (952)
+
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 4
No 442
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.78 E-value=0.0017 Score=59.06 Aligned_cols=56 Identities=21% Similarity=0.272 Sum_probs=42.0
Q ss_pred eeecCCcccC-CCCcccccCCCCCceEEccCccccCcccccccccccccEEeCCCCccc
Q 002214 474 DIYLSRNNLS-GNIPSTIIGLKNLQHLSLEHNKLQGPIPESFGELVSLEFLDLSNNDLS 531 (952)
Q Consensus 474 ~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 531 (952)
.++.+++.++ ..+|..+. ++|+.|+|++|+|+.+.+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5677777776 23444333 46888888888888777778888888999999999875
No 443
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.59 E-value=0.0031 Score=69.20 Aligned_cols=74 Identities=14% Similarity=0.216 Sum_probs=45.4
Q ss_pred cceecCccceEEEEEEeCC---------CcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCc-cceeeeEeecCCeeEEE
Q 002214 669 ENLIGIGSYGSVYKGRFPD---------GIEVAIKVFHLQREGALNSFDAECEILKTIRHRN-LVKIISSCTNHNFKALV 738 (952)
Q Consensus 669 ~~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lv 738 (952)
.+.++.|....+|+....+ ++.+++|+....... ......|..+++.+...+ +.++++.. . -++|
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v 112 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRI 112 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEE
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEec--C--CcEE
Confidence 3567788888999998754 268999987543221 122467888888885333 34666544 2 2689
Q ss_pred EEccCCCCh
Q 002214 739 LEYMPKGSL 747 (952)
Q Consensus 739 ~e~~~~g~L 747 (952)
|||++|.++
T Consensus 113 ~e~i~G~~l 121 (369)
T 3c5i_A 113 EEWLYGDPL 121 (369)
T ss_dssp EECCCSEEC
T ss_pred EEEecCCcC
Confidence 999987544
No 444
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.51 E-value=0.0068 Score=65.50 Aligned_cols=67 Identities=10% Similarity=0.148 Sum_probs=43.6
Q ss_pred CccceEEEEEEeCCCcEEEEEEeeccCchhhHHHHHHHHHHHhCC---CCccceeeeE------eecCCeeEEEEEccCC
Q 002214 674 IGSYGSVYKGRFPDGIEVAIKVFHLQREGALNSFDAECEILKTIR---HRNLVKIISS------CTNHNFKALVLEYMPK 744 (952)
Q Consensus 674 ~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~------~~~~~~~~lv~e~~~~ 744 (952)
.|....||+....+| .+++|+...... ..|+.+++.+. -|.+.+++.. ....+..++||+|++|
T Consensus 33 ~g~~N~vy~v~~~~g-~~vLK~~~~~~~------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~G 105 (339)
T 3i1a_A 33 ADTNAFAYQADSESK-SYFIKLKYGYHD------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIHA 105 (339)
T ss_dssp SCSSCEEEEEECSSC-EEEEEEEECSSC------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCCC
T ss_pred CccccceEEEEeCCC-CEEEEEecCccc------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccCC
Confidence 333679999987777 899998765432 34666666552 2224454432 2335678999999998
Q ss_pred CCh
Q 002214 745 GSL 747 (952)
Q Consensus 745 g~L 747 (952)
..+
T Consensus 106 ~~~ 108 (339)
T 3i1a_A 106 PNG 108 (339)
T ss_dssp CBT
T ss_pred CcC
Confidence 765
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.03 E-value=0.018 Score=63.07 Aligned_cols=139 Identities=14% Similarity=0.155 Sum_probs=81.4
Q ss_pred ceecCccceEEEEEEeCC--------CcEEEEEEeeccCch------------------hhHHHHHHHHHHHhCC-CCcc
Q 002214 670 NLIGIGSYGSVYKGRFPD--------GIEVAIKVFHLQREG------------------ALNSFDAECEILKTIR-HRNL 722 (952)
Q Consensus 670 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~------------------~~~~~~~E~~~l~~l~-h~ni 722 (952)
+.|..|--..+|+...++ ++.|.+++.-...+. ..+....|..+++.+. +--.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456667778899988753 368899987433221 0112235888888884 4345
Q ss_pred ceeeeEeecCCeeEEEEEccCCCChhHH-----------------hhhcC----CCCC--HHHHHHHHHHHH--------
Q 002214 723 VKIISSCTNHNFKALVLEYMPKGSLEDC-----------------MYASN----FNLD--IFQRLGIMIDVA-------- 771 (952)
Q Consensus 723 v~l~~~~~~~~~~~lv~e~~~~g~L~~~-----------------l~~~~----~~l~--~~~~~~i~~~ia-------- 771 (952)
.++++++... +|+||++|-+|..- ++... .... +....++..++.
T Consensus 138 Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 5677766432 89999987655211 01111 1122 223333332221
Q ss_pred --------------HHH----HHHHh-cCCCCeEeCCCCCCCeeeCCC------CcEEEecccccc
Q 002214 772 --------------SAL----EYLHF-GHSNPIVHCDIKPSNVLLDDS------MVAHLSDFGIAK 812 (952)
Q Consensus 772 --------------~~l----~~Lh~-~h~~~ivH~Dlk~~Nill~~~------~~~kl~Dfgla~ 812 (952)
.-+ ++|.. .....++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 112 22221 244568999999999999876 789999999875
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.50 E-value=0.024 Score=62.77 Aligned_cols=74 Identities=9% Similarity=0.144 Sum_probs=48.9
Q ss_pred cceecCccceEEEEEEeCC--------CcEEEEEEeeccCchhhHHHHHHHHHHHhCC-CCccceeeeEeecCCeeEEEE
Q 002214 669 ENLIGIGSYGSVYKGRFPD--------GIEVAIKVFHLQREGALNSFDAECEILKTIR-HRNLVKIISSCTNHNFKALVL 739 (952)
Q Consensus 669 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 739 (952)
.+.+..|--..+|+....+ ++.|++|+....... ...-.+|.++++.+. +.-..++++.+. -+.||
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~-~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~ 149 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGK-FYDSKVELDVFRYLSNINIAPNIIADFP----EGRIE 149 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-C-CCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcch-hcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEE
Confidence 3567778888999998753 688999987543222 223367888888884 332445555432 26899
Q ss_pred EccCCCCh
Q 002214 740 EYMPKGSL 747 (952)
Q Consensus 740 e~~~~g~L 747 (952)
||++|.++
T Consensus 150 efI~G~~l 157 (424)
T 3mes_A 150 EFIDGEPL 157 (424)
T ss_dssp ECCCSEEC
T ss_pred EEeCCccC
Confidence 99998764
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=92.29 E-value=0.29 Score=53.91 Aligned_cols=30 Identities=27% Similarity=0.390 Sum_probs=25.5
Q ss_pred CeEeCCCCCCCeee------CCCCcEEEeccccccc
Q 002214 784 PIVHCDIKPSNVLL------DDSMVAHLSDFGIAKL 813 (952)
Q Consensus 784 ~ivH~Dlk~~Nill------~~~~~~kl~Dfgla~~ 813 (952)
.++|+|+.+.||++ +++..++++||.+|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 36799999999999 4567899999998863
No 448
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=74.74 E-value=0.4 Score=53.80 Aligned_cols=61 Identities=13% Similarity=0.049 Sum_probs=18.1
Q ss_pred CccceecCccceEEEEEEeCC-CcEEEE------EEeeccC--chhhHHHHHHHHHHHhCCCCccceeeeEee
Q 002214 667 SEENLIGIGSYGSVYKGRFPD-GIEVAI------KVFHLQR--EGALNSFDAECEILKTIRHRNLVKIISSCT 730 (952)
Q Consensus 667 ~~~~~lg~G~~g~Vy~~~~~~-~~~vav------K~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 730 (952)
.+.+.+| ||.||+|.+.. ..+||| |..+... .+....+.+|+.+++..+|||+++.+++..
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 3456676 99999998854 467888 6654322 223356888999999999999999987664
No 449
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=60.69 E-value=17 Score=35.30 Aligned_cols=121 Identities=8% Similarity=0.158 Sum_probs=79.1
Q ss_pred CCCccceeeeEeecCCeeEEEEEccCCC-ChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCee
Q 002214 718 RHRNLVKIISSCTNHNFKALVLEYMPKG-SLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVL 796 (952)
Q Consensus 718 ~h~niv~l~~~~~~~~~~~lv~e~~~~g-~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nil 796 (952)
.||+++.. .+-.+++...+.++.-+.+ +... +. ..+...+++++..|+...+++ ..=+|=-+.|+|++
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-ik----~~~~~eKlr~l~ni~~l~~~~-----~~r~tf~L~P~NL~ 111 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-IK----SFTKNEKLRYLLNIKNLEEVN-----RTRYTFVLAPDELF 111 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-GG----GSCHHHHHHHHHHGGGGGGGG-----GSSEECCCSGGGEE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-HH----hcCHHHHHHHHHHHHHHHHHh-----cCceEEEEecceEE
Confidence 58888866 4555556666666654322 2222 22 378899999999998877554 23467789999999
Q ss_pred eCCCCcEEEeccccccccCCcCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCccccCc
Q 002214 797 LDDSMVAHLSDFGIAKLLSEEDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNEFFTGE 872 (952)
Q Consensus 797 l~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~ 872 (952)
++.++.+++.-.|+-..+ +|. ..+...=.-.+=+++..+++++..|+....+.
T Consensus 112 f~~~~~p~i~~RGik~~l------------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe~l~~G~ 164 (215)
T 4ann_A 112 FTRDGLPIAKTRGLQNVV------------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFDALVEGN 164 (215)
T ss_dssp ECTTSCEEESCCEETTTB------------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHHHHHHSC
T ss_pred EcCCCCEEEEEccCccCC------------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHHHHHcCh
Confidence 999999999766643322 222 11222233356678889999999987654443
No 450
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=57.70 E-value=44 Score=32.53 Aligned_cols=116 Identities=10% Similarity=0.153 Sum_probs=76.4
Q ss_pred CCCccceeeeEeecCCeeEEEEEccCCC-ChhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCee
Q 002214 718 RHRNLVKIISSCTNHNFKALVLEYMPKG-SLEDCMYASNFNLDIFQRLGIMIDVASALEYLHFGHSNPIVHCDIKPSNVL 796 (952)
Q Consensus 718 ~h~niv~l~~~~~~~~~~~lv~e~~~~g-~L~~~l~~~~~~l~~~~~~~i~~~ia~~l~~Lh~~h~~~ivH~Dlk~~Nil 796 (952)
.||++ -..+-.+++...+.++.-+++ +.. .+. ..+...+++.+..++...+ .|...-+|=-+.|+|++
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~-~i~----~~~~~eKlrll~nl~~L~~----~~~~~r~tf~l~P~NL~ 116 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFA-AIR----KTTLLSRIRAAIHLVSKVK----HHSARRLIFIVCPENLM 116 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHH-HHH----TSCHHHHHHHHHHHHHHHS----SCCSSSEECCCCGGGEE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHH-HHH----hcCHHHHHHHHHHHHHHHH----HhhhCceeEEEeCceEE
Confidence 57887 444456667777777765443 333 232 4788999999999887654 13455678889999999
Q ss_pred eCCCCcEEEeccccccccCCcCcccccccccccccccccccCcCCcCcccchHhHHHHHHHHHhCCCCCCc
Q 002214 797 LDDSMVAHLSDFGIAKLLSEEDSMKQTQTLATIGYIAPEYGREGQVSIKGDVYNYGIMLMEVFTGMKPTNE 867 (952)
Q Consensus 797 l~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~ 867 (952)
++.++.+++.-.|.-. -++|.-. +...=.-.+=+++..++.++..|++
T Consensus 117 f~~~~~p~i~hRGi~~------------------~lpP~e~-----~ee~fl~qyKali~all~~K~~Fe~ 164 (219)
T 4ano_A 117 FNRALEPFFLHVGVKE------------------SLPPDEW-----DDERLLREVKATVLALTEGEYRFDE 164 (219)
T ss_dssp ECTTCCEEESCCEETT------------------TBSSCSC-----CHHHHHHHHHHHHHHHTTCSSCHHH
T ss_pred EeCCCcEEEEEcCCcc------------------cCCCCCC-----CHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 9999999998666433 2233321 1111233456788888888888755
No 451
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=52.81 E-value=31 Score=28.89 Aligned_cols=48 Identities=13% Similarity=0.059 Sum_probs=28.8
Q ss_pred CCCCCCCCCcccccCCCCcEEEccCccccCCCCccccCCCcceEEEecc
Q 002214 359 DNNLSGSLPITLGRLKKLQGLDLQNNKFEGPIPQEFCHFSRLYVVYLNR 407 (952)
Q Consensus 359 ~n~l~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~ 407 (952)
+..++.+...+|.++++|+.+.|-.+ ++.+...+|.++.+|+.+.+..
T Consensus 5 g~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 5 GEPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred CCccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 34455555666677777777776554 3445556666666666666554
No 452
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=51.08 E-value=26 Score=29.40 Aligned_cols=45 Identities=13% Similarity=0.064 Sum_probs=21.9
Q ss_pred ccccCCccccccCCccEEEeeCCcCCccCchhhhccCCCcEeeecc
Q 002214 191 FTGRLPRDLGNSTKLKSLDLGFNNLNGEIPQEIGNLRNLEILGIDQ 236 (952)
Q Consensus 191 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 236 (952)
++.+...+|.++++|+.+.|-.+ ++.+...+|.++.+|+.+.+..
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 33344445555555555555543 2224444555555555555543
No 453
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=43.74 E-value=3.2e+02 Score=31.68 Aligned_cols=44 Identities=23% Similarity=0.188 Sum_probs=31.6
Q ss_pred HHHHHHHHHH--HHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEecccccc
Q 002214 762 QRLGIMIDVA--SALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAK 812 (952)
Q Consensus 762 ~~~~i~~~ia--~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~ 812 (952)
.+..++..+| +.+.|+ +-=+|=.++|||++.+|.+.-+|||.+.
T Consensus 530 ar~nF~~SlA~~Svv~YI-------LGlGDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 530 VMDTYIKSCAGYCVITYL-------LGVGDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp HHHHHHHHHHHHHHHHHH-------HTCCCCCTTTEEECTTSCEEECCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHH-------ccCCCCCCcceEEeCCCCEEEEeehhhh
Confidence 3444444433 445565 2236888999999999999999999885
No 454
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=38.44 E-value=4.4e+02 Score=29.90 Aligned_cols=46 Identities=20% Similarity=0.109 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHH--HHHHHHHhcCCCCeEeCCCCCCCeeeCCCCcEEEecccccc
Q 002214 760 IFQRLGIMIDVA--SALEYLHFGHSNPIVHCDIKPSNVLLDDSMVAHLSDFGIAK 812 (952)
Q Consensus 760 ~~~~~~i~~~ia--~~l~~Lh~~h~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~ 812 (952)
+..+..++...| +.+.|+ -| =||=.++|||++.+|.+.=+|||.+.
T Consensus 454 ~~a~~nF~~S~A~ySvv~YI-----LG--igDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 454 AEVMDTYVKSCAGYCVITYI-----LG--VGDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-----HT--CCCCCTTSEEECTTSCEEECCCSSCT
T ss_pred HHHHHHHHHHHHHHhHhhee-----ee--ccCCCCcceeEcCCCCEeeeehHHhh
Confidence 444455555433 445666 12 35778899999999999999999884
No 455
>3pk1_B Apoptosis regulator BAX; BCL-2 family fold, regulation of apoptosis, mitochondri apoptosis-apoptosis regulator complex; 2.49A {Homo sapiens} PDB: 3pl7_C 2xa0_C
Probab=30.80 E-value=38 Score=21.60 Aligned_cols=24 Identities=33% Similarity=0.409 Sum_probs=20.8
Q ss_pred CCCHHHHHHHHHHHHHHHhhhccc
Q 002214 928 RVNTKEIISRLIKIRDLLFANIEM 951 (952)
Q Consensus 928 RPs~~ev~~~L~~i~~~~~~~~~~ 951 (952)
-|+.+++++.|.+|-+.+..+.|+
T Consensus 6 Dp~~K~l~~cL~~IgDEld~N~EL 29 (34)
T 3pk1_B 6 DASTKKLSECLKRIGDELDSNMEL 29 (34)
T ss_dssp -CTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHcccHHH
Confidence 388999999999999999988774
No 456
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=29.39 E-value=1.1e+02 Score=31.80 Aligned_cols=139 Identities=14% Similarity=0.065 Sum_probs=68.0
Q ss_pred CCccceecCccceEEEEEEeCCCcEEEEEEeeccCchhhHHHHHHHHHHHhCCCCccceeeeE-----------------
Q 002214 666 FSEENLIGIGSYGSVYKGRFPDGIEVAIKVFHLQREGALNSFDAECEILKTIRHRNLVKIISS----------------- 728 (952)
Q Consensus 666 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~----------------- 728 (952)
+..++..-.|.. .||.+.. ++..|+||-.. ....+.+-.++...=.+.-|+..-+...
T Consensus 71 v~~I~~s~~Gst-gvff~~t-d~~~~VVK~s~---~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~ 145 (342)
T 1cja_A 71 FKGIERSEKGTE-GLFFVET-ESGVFIVKRST---NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKS 145 (342)
T ss_dssp EEEEEECCSTTS-CEEEEEE-SSCEEEEECCT---THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSS
T ss_pred eeEEEeccCCCC-CeEEEEe-CCCEEEEeCcH---HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhh
Confidence 334444556654 4555544 57789999441 2222333334433333455543222111
Q ss_pred -----eecCCeeEEEEEccCCCChhHHhhhc-CCCCCHHHHHHHHHHHH--HHHHHHH-hcCCCCeEe-CCCCCCCeeeC
Q 002214 729 -----CTNHNFKALVLEYMPKGSLEDCMYAS-NFNLDIFQRLGIMIDVA--SALEYLH-FGHSNPIVH-CDIKPSNVLLD 798 (952)
Q Consensus 729 -----~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~l~~~~~~~i~~~ia--~~l~~Lh-~~h~~~ivH-~Dlk~~Nill~ 798 (952)
.......+++|||++|..|...-... ...+... .+.++. -++++.. +..+-+.++ .--.+.|||++
T Consensus 146 ~~~l~~l~~~~~~l~meyv~G~~L~e~~~~~~~~~f~~~----~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~ 221 (342)
T 1cja_A 146 FRVITTLANQANILLMELVRGITLNKLTTTSAPEVLTKS----TMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLS 221 (342)
T ss_dssp SCHHHHHTTCSEEEEEECCCEEESTTCCSSSHHHHSCHH----HHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEE
T ss_pred hHHHHHhhcccceehhhhcCCCccccchhhhhhhhcCHH----HHHhhchhheehhhhcCCccCcccccCCCChhheEEe
Confidence 00122456999999876654321110 0012222 233322 2344443 222222222 23578899998
Q ss_pred CCCc-EEEeccccccc
Q 002214 799 DSMV-AHLSDFGIAKL 813 (952)
Q Consensus 799 ~~~~-~kl~Dfgla~~ 813 (952)
+++. +.++|-+.+..
T Consensus 222 ~~n~~~~~IDhn~af~ 237 (342)
T 1cja_A 222 ERGATVVPIDSKIIPL 237 (342)
T ss_dssp SBTTCEEECSCCCCCC
T ss_pred CCCCeEEEEcCCcccc
Confidence 7555 88999998864
Done!