Query 002219
Match_columns 952
No_of_seqs 476 out of 2502
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 17:27:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002219.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002219hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1v0w_A Phospholipase D; hydrol 100.0 3.2E-39 1.1E-43 377.3 20.2 163 361-577 54-225 (506)
2 3hsi_A Phosphatidylserine synt 100.0 4.4E-36 1.5E-40 346.8 24.6 361 361-948 25-410 (458)
3 1xdp_A Polyphosphate kinase; P 99.9 8.6E-24 3E-28 253.6 19.9 141 366-575 340-494 (687)
4 2o8r_A Polyphosphate kinase; s 99.9 1.1E-22 3.8E-27 242.9 21.1 282 366-949 345-645 (705)
5 4ggj_A Mitochondrial cardiolip 99.6 1.7E-16 5.8E-21 163.8 8.5 144 362-577 35-179 (196)
6 1byr_A Protein (endonuclease); 99.6 3.3E-15 1.1E-19 146.5 11.8 127 762-948 12-139 (155)
7 1byr_A Protein (endonuclease); 99.6 1.6E-14 5.4E-19 141.6 13.2 143 364-576 4-149 (155)
8 4ggj_A Mitochondrial cardiolip 99.5 7.5E-15 2.6E-19 151.5 8.7 123 764-948 46-168 (196)
9 4gel_A Mitochondrial cardiolip 99.5 3.1E-14 1.1E-18 148.1 8.5 145 369-577 54-211 (220)
10 1xdp_A Polyphosphate kinase; P 99.3 2.1E-12 7.3E-17 155.3 10.6 125 767-949 350-486 (687)
11 4gel_A Mitochondrial cardiolip 99.3 1E-11 3.5E-16 129.1 10.3 141 763-948 57-200 (220)
12 3hsi_A Phosphatidylserine synt 99.1 5.1E-10 1.7E-14 129.5 15.3 156 742-945 26-186 (458)
13 1v0w_A Phospholipase D; hydrol 99.0 1.3E-09 4.3E-14 127.5 14.0 144 763-943 65-210 (506)
14 1h6h_A Neutrophil cytosol fact 98.9 2.6E-09 8.8E-14 104.7 9.7 116 43-202 19-137 (143)
15 3p0c_A Nischarin; structural g 98.9 5E-09 1.7E-13 101.4 11.6 104 45-204 24-128 (130)
16 4az9_A Sorting nexin-24; prote 98.9 4.8E-09 1.6E-13 101.5 11.2 104 45-202 24-127 (129)
17 2ett_A Sorting nexin-22; PX do 98.9 5.8E-09 2E-13 100.8 11.5 107 42-203 9-119 (128)
18 1kq6_A NCF-1, P47PHOX, neutrop 98.9 5.3E-09 1.8E-13 102.5 10.8 128 45-217 8-140 (141)
19 2v6v_A BUD emergence protein 1 98.8 2.7E-08 9.1E-13 99.3 11.1 124 43-208 17-143 (156)
20 1xte_A Serine/threonine-protei 98.7 2.3E-08 8E-13 99.4 9.7 109 43-203 7-117 (154)
21 3lui_A Sorting nexin-17, SNX17 98.7 2.4E-08 8.3E-13 94.5 7.6 107 45-203 5-111 (115)
22 1pls_A Pleckstrin homology dom 98.6 2.5E-07 8.5E-12 85.6 12.3 95 211-336 5-100 (113)
23 1u5d_A SKAP55, SRC kinase-asso 98.6 1.2E-07 4.2E-12 86.1 10.0 102 210-336 2-104 (108)
24 2rsg_A Collagen type IV alpha- 98.6 1.8E-07 6.3E-12 83.8 9.6 88 213-335 3-92 (94)
25 2ar5_A Phosphoinositide 3-kina 98.6 1.9E-07 6.6E-12 89.1 10.0 106 45-202 7-117 (121)
26 2l73_A NADPH oxidase organizer 98.5 1.7E-07 5.8E-12 92.8 9.1 122 44-208 9-135 (149)
27 2d9y_A Pleckstrin homology dom 98.5 5.8E-07 2E-11 83.2 12.2 98 210-336 10-108 (117)
28 2dn6_A KIAA0640 protein; PH do 98.5 4.9E-07 1.7E-11 83.4 11.6 97 209-336 6-102 (115)
29 1v5u_A SBF1, SET binding facto 98.5 5.9E-07 2E-11 83.2 12.1 105 209-338 6-112 (117)
30 1upq_A PEPP1; PH domain, phosp 98.5 4.1E-07 1.4E-11 85.1 11.1 98 211-337 11-109 (123)
31 2yry_A Pleckstrin homology dom 98.5 4.3E-07 1.5E-11 84.9 11.1 98 210-336 21-119 (122)
32 1u5f_A SRC-associated adaptor 98.5 5E-07 1.7E-11 88.0 11.9 105 208-337 14-119 (148)
33 2i4k_A Sorting nexin-1, SNX1; 98.5 2.3E-08 7.8E-13 95.7 2.3 113 45-200 5-127 (128)
34 2iwl_X Phosphatidylinositol-4- 98.5 2.5E-07 8.4E-12 90.5 9.5 107 45-203 22-133 (140)
35 1wgq_A FYVE, rhogef and PH dom 98.5 1.3E-06 4.4E-11 80.3 13.6 97 209-337 6-103 (109)
36 2v14_A Kinesin-like motor prot 98.5 4.8E-07 1.7E-11 87.9 11.0 49 45-95 7-55 (134)
37 2da0_A 130-kDa phosphatidylino 98.5 4.3E-07 1.5E-11 84.7 10.2 91 211-336 10-100 (114)
38 1v89_A Hypothetical protein KI 98.5 5.6E-07 1.9E-11 83.2 10.9 98 208-336 5-111 (118)
39 2o8r_A Polyphosphate kinase; s 98.5 4E-07 1.4E-11 109.4 12.5 126 766-949 354-493 (705)
40 2cod_A Centaurin-delta 1; ARF 98.5 4.7E-07 1.6E-11 84.1 10.3 92 210-336 7-98 (115)
41 2dhk_A TBC1 domain family memb 98.5 7.8E-07 2.7E-11 83.6 11.9 96 209-336 6-103 (119)
42 1wi1_A Calcium-dependent activ 98.5 4.1E-07 1.4E-11 87.5 9.7 97 212-336 9-109 (126)
43 1fao_A Dual adaptor of phospho 98.5 9.7E-07 3.3E-11 83.2 11.9 95 210-336 17-111 (126)
44 1eaz_A Tandem PH domain contai 98.5 5.8E-07 2E-11 84.2 10.2 99 209-336 12-110 (125)
45 2dkp_A Pleckstrin homology dom 98.4 1.3E-06 4.4E-11 82.3 12.2 98 210-336 20-118 (128)
46 1x1f_A Signal-transducing adap 98.4 6.9E-07 2.3E-11 88.4 10.5 97 209-336 16-112 (149)
47 1v5p_A Pleckstrin homology dom 98.4 7.9E-07 2.7E-11 85.3 10.6 98 213-338 17-121 (126)
48 2d9v_A Pleckstrin homology dom 98.4 1.2E-06 3.9E-11 83.9 11.8 102 209-337 6-114 (130)
49 2csk_A Sorting nexin 12; SNX12 98.4 7.7E-07 2.6E-11 87.5 10.6 116 45-203 12-133 (146)
50 1fgy_A GRP1; PH domain, signal 98.4 1.6E-06 5.5E-11 81.2 11.5 94 210-336 4-119 (127)
51 1kmd_A VAM7P, vacuolar morphog 98.4 2.9E-07 9.9E-12 87.2 6.2 99 45-201 7-115 (117)
52 1v88_A Oxysterol binding prote 98.4 1.7E-06 5.8E-11 83.5 11.7 94 209-336 6-123 (130)
53 3iq2_A Sorting nexin-7; SNX7, 98.4 1.2E-06 4.1E-11 85.6 10.5 109 45-203 10-127 (138)
54 1dyn_A Dynamin; signal transdu 98.4 1.9E-06 6.5E-11 82.4 11.3 96 212-336 13-116 (125)
55 3aj4_A Pleckstrin homology dom 98.4 1.5E-06 5.1E-11 80.2 10.1 103 212-336 6-110 (112)
56 2cof_A Protein KIAA1914; PH do 98.4 2.6E-06 8.8E-11 78.4 11.5 93 210-336 7-100 (107)
57 1ocs_A Sorting nexin GRD19; so 98.4 1.5E-06 5E-11 87.2 10.5 113 45-201 37-159 (162)
58 2i5f_A Pleckstrin; PH domain, 98.3 2.3E-06 7.9E-11 78.1 10.9 98 209-335 5-107 (109)
59 2lul_A Tyrosine-protein kinase 98.3 2.2E-06 7.6E-11 85.7 11.0 105 210-337 14-121 (164)
60 3rcp_A Pleckstrin homology dom 98.3 6.2E-06 2.1E-10 74.8 12.7 77 245-336 13-92 (103)
61 1x05_A Pleckstrin; PH domain, 98.3 3.3E-06 1.1E-10 79.8 10.5 99 209-336 16-119 (129)
62 1btk_A Bruton'S tyrosine kinas 98.3 2E-06 7E-11 86.5 9.4 111 212-337 4-132 (169)
63 2j59_M RHO-GTPase activating p 98.2 4E-06 1.4E-10 83.3 10.9 105 212-336 4-110 (168)
64 4a6h_A Phosphatidylinositol 4, 98.2 5.7E-06 2E-10 78.8 11.1 95 211-336 6-117 (120)
65 1u5e_A SRC-associated adaptor 98.2 3.3E-06 1.1E-10 87.9 9.9 104 208-336 103-207 (211)
66 3cxb_B Pleckstrin homology dom 98.2 7.3E-06 2.5E-10 76.6 11.0 82 245-336 18-100 (112)
67 2d9x_A Oxysterol binding prote 98.2 3.3E-06 1.1E-10 79.2 8.6 92 210-336 7-103 (120)
68 2y7b_A Actin-binding protein a 98.2 2.6E-06 8.9E-11 81.0 7.8 100 211-336 5-127 (134)
69 2coc_A FYVE, rhogef and PH dom 98.2 7.9E-06 2.7E-10 77.0 10.9 82 245-336 21-105 (112)
70 1wg7_A Dedicator of cytokinesi 98.2 7.2E-06 2.5E-10 79.7 10.8 101 209-336 16-123 (150)
71 1unq_A RAC-alpha serine/threon 98.2 1.8E-06 6.1E-11 81.4 6.2 97 211-336 8-109 (125)
72 1btn_A Beta-spectrin; signal t 98.1 6.6E-06 2.3E-10 74.7 9.3 101 213-335 1-106 (106)
73 1x1g_A Pleckstrin 2; PH domain 98.1 7.3E-06 2.5E-10 77.3 9.9 105 209-337 16-124 (129)
74 2p0d_A RHO GTPase-activating p 98.1 1.1E-05 3.7E-10 77.3 10.7 101 210-336 11-123 (129)
75 3tfm_A Myosin X; split PH doma 98.1 7.5E-06 2.6E-10 86.1 10.3 101 208-337 55-155 (228)
76 2wwe_A Phosphoinositide-3-kina 98.1 6.7E-06 2.3E-10 78.7 8.1 104 38-198 18-125 (127)
77 1wjm_A Beta-spectrin III; PH d 98.0 8.4E-06 2.9E-10 76.7 7.7 106 209-336 6-116 (123)
78 3lju_X ARF-GAP with dual PH do 98.0 2.2E-05 7.7E-10 88.9 12.0 103 210-336 268-371 (386)
79 2dyb_A Neutrophil cytosol fact 98.0 1.3E-05 4.5E-10 89.2 9.3 114 45-202 25-140 (341)
80 2w2x_D 1-phosphatidylinositol- 98.0 1.8E-05 6.3E-10 75.1 8.8 98 208-336 9-118 (124)
81 2rlo_A Centaurin-gamma 1; spli 97.9 2.6E-05 9E-10 74.0 9.3 35 302-336 88-123 (128)
82 3dyt_A Sorting nexin-9; 3-heli 97.9 2.3E-05 7.8E-10 88.2 8.6 103 45-200 22-128 (366)
83 2r09_A Cytohesin-3; autoinhibi 97.9 4.8E-05 1.6E-09 84.9 11.1 93 211-336 213-327 (347)
84 4akv_A Sorting nexin-33; trans 97.9 1.9E-05 6.6E-10 89.4 8.0 107 42-201 39-149 (386)
85 1qqg_A IRS-1, insulin receptor 97.8 3.3E-05 1.1E-09 83.2 8.4 92 209-336 8-111 (264)
86 3tca_A Amyloid beta A4 precurs 97.8 5E-05 1.7E-09 81.5 9.6 101 210-336 167-275 (291)
87 3a8p_A T-lymphoma invasion and 97.8 7.1E-05 2.4E-09 80.5 10.7 105 209-336 9-123 (263)
88 1dro_A Beta-spectrin; cytoskel 97.8 3.6E-05 1.2E-09 72.5 7.0 110 211-336 8-118 (122)
89 2ys3_A UNC-112-related protein 97.8 4.3E-05 1.5E-09 74.3 7.4 80 245-336 26-111 (137)
90 2q13_A DCC-interacting protein 97.7 6.6E-05 2.3E-09 84.6 9.5 95 211-336 278-374 (385)
91 3lju_X ARF-GAP with dual PH do 97.7 5E-05 1.7E-09 86.0 8.4 92 212-335 147-244 (386)
92 4h8s_A DCC-interacting protein 97.6 6.2E-05 2.1E-09 85.5 6.8 94 212-336 302-397 (407)
93 2dtc_A RAL guanine nucleotide 97.5 0.00068 2.3E-08 65.2 12.2 99 213-337 3-112 (126)
94 3pp2_A RHO GTPase-activating p 97.5 0.00044 1.5E-08 65.6 10.8 106 209-336 6-122 (124)
95 2rov_A RHO-associated protein 97.4 0.00027 9.2E-09 67.0 7.9 87 246-336 19-114 (117)
96 4f7h_A Fermitin family homolog 97.4 0.00074 2.5E-08 67.4 11.2 80 245-336 64-149 (173)
97 3hk0_A Growth factor receptor- 97.4 0.00052 1.8E-08 73.6 10.5 100 210-336 131-239 (256)
98 4bbk_A Kindlin-1, fermitin fam 97.3 0.0011 3.8E-08 65.5 10.5 80 245-336 43-128 (165)
99 1w1g_A HPDK1, 3-phosphoinositi 97.1 0.00092 3.1E-08 66.0 7.8 89 209-336 49-138 (151)
100 3hpc_X SNX5 protein; sprting n 97.1 0.004 1.4E-07 62.3 12.5 47 42-94 9-61 (161)
101 3qph_A TRMB, A global transcri 96.9 0.0014 5E-08 72.9 8.5 109 762-942 117-230 (342)
102 4gmv_A RAS-associated and plec 96.9 0.0018 6.2E-08 70.3 8.8 101 209-336 156-265 (281)
103 2fjl_A 1-phosphatidylinositol- 96.9 0.0037 1.3E-07 61.7 9.9 38 299-336 107-147 (150)
104 4ejn_A RAC-alpha serine/threon 96.8 0.0014 4.9E-08 74.3 7.5 98 211-337 6-108 (446)
105 2d9w_A Docking protein 2; PH d 95.9 0.052 1.8E-06 52.0 10.9 102 209-337 10-121 (127)
106 3qph_A TRMB, A global transcri 95.8 0.03 1E-06 62.3 10.5 98 364-495 110-207 (342)
107 3a8n_A TIAM-1, T-lymphoma inva 95.7 0.0078 2.7E-07 65.2 4.9 115 208-336 8-123 (279)
108 3tfm_A Myosin X; split PH doma 94.2 0.064 2.2E-06 56.0 6.8 36 209-264 19-54 (228)
109 2f5t_X Archaeal transcriptiona 93.8 0.14 4.9E-06 53.9 8.5 53 370-435 7-59 (233)
110 2c1l_A Restriction endonucleas 91.9 0.26 9.1E-06 52.0 7.1 92 804-942 52-146 (358)
111 1v5m_A SH2 and PH domain-conta 82.3 8.9 0.00031 37.0 10.5 82 245-336 40-129 (136)
112 3mpx_A FYVE, rhogef and PH dom 64.0 25 0.00086 39.4 10.3 78 246-336 257-336 (434)
113 2f5t_X Archaeal transcriptiona 63.9 13 0.00043 39.1 7.2 51 762-827 8-58 (233)
114 1v61_A RAC/CDC42 guanine nucle 60.2 24 0.00082 33.9 7.8 82 247-337 44-126 (132)
115 3ml4_A Protein DOK-7; tyrosine 59.9 30 0.001 36.1 9.0 34 302-335 78-111 (224)
116 1zc3_B Exocyst complex protein 50.1 86 0.0029 28.9 9.7 78 249-336 27-106 (113)
117 1q32_A TDP1P;, tyrosyl-DNA pho 40.9 15 0.00053 43.1 3.6 41 455-500 165-209 (544)
118 3t06_A PDZ-rhogef, RHO guanine 36.5 1.4E+02 0.0048 33.1 10.5 89 246-338 309-409 (418)
119 1jy1_A TDP1, tyrosyl-DNA phosp 29.2 34 0.0011 39.5 3.9 43 454-500 100-145 (464)
120 1mai_A Phospholipase C delta-1 27.5 1.5E+02 0.0053 27.6 7.6 35 302-336 84-120 (131)
121 3qwm_A Iqsec1, IQ motif and SE 25.1 3.8E+02 0.013 25.9 9.8 76 247-336 33-121 (140)
122 2lg1_A A-kinase anchor protein 22.9 2E+02 0.007 28.6 7.9 82 246-336 85-171 (185)
No 1
>1v0w_A Phospholipase D; hydrolase, substrate SOAK, dibutyrylphosphatidylcholine, DIC4PC; 1.35A {Streptomyces SP} SCOP: d.136.1.2 d.136.1.2 PDB: 1v0s_A 1v0r_A 1v0t_A 1v0v_A 1v0u_A 1v0y_A* 1f0i_A 2ze4_A* 2ze9_A*
Probab=100.00 E-value=3.2e-39 Score=377.33 Aligned_cols=163 Identities=21% Similarity=0.264 Sum_probs=116.5
Q ss_pred CCCeEEEEecHHHHHHHHHHHHHhcccEEEEeeecCCceeEE-EcCCCCchhHHHHHHHHHHhhCC--cEEEEEEccchh
Q 002219 361 DGSQAQWFVDGKAAFEAIASSIEDAKSEIFICGWWLCPELYL-RRPFHNHASSRLDALLEAKAKQG--VQIYILLYKEVA 437 (952)
Q Consensus 361 ~gn~v~~lvdG~~~f~al~~aI~~Ak~~I~I~~W~lsPe~Yl-~rp~~d~~~~rL~~~L~~aA~rG--VkVrILl~d~~~ 437 (952)
.++.+.++.+|.++|++|+++|++||++|+| ++|+ +. .+..+.+|.++|++||+|| |+||||++ ..+
T Consensus 54 ~~~~~~~~~~g~~~~~~l~~~I~~Ak~~I~i-------~~y~~~~--~d~~g~~i~~aL~~aa~rGp~V~Vril~D-~~g 123 (506)
T 1v0w_A 54 GDDKCADRVGTKRLLAKMTENIGNATRTVDI-------STLAPFP--NGAFQDAIVAGLKESAAKGNKLKVRILVG-AAP 123 (506)
T ss_dssp TCTTCCCCHHHHHHHHHHHHHHHTCSSEEEE-------EEESSCC--CHHHHHHHHHHHHHHHHTTCCEEEEEEEE-CCC
T ss_pred CCceeEEecCHHHHHHHHHHHHHHhccEEEE-------EEeeccC--CChHHHHHHHHHHHHHhCCCCcEEEEEEe-Ccc
Confidence 3556778889999999999999999999999 5566 35 2567899999999999999 99999974 432
Q ss_pred hhh--hcchhhhHHHHhcc----CCCeEEEEcCCCcCCCcccccCcceEEEEeCCeEEEccccCCCCCcCCCCCCCCCCC
Q 002219 438 LAL--KINSVYSKRKLLSI----HENVRVLRYPDHFASGVYLWSHHEKLVIVDYQICFIGGLDLCFGRYDTFEHKIGDNP 511 (952)
Q Consensus 438 ~~l--~~~s~~~k~~L~~l----~~gI~V~r~P~~~~~~~~~~rhHrKivVIDg~vAFvGGiNL~~gRwDt~~H~l~D~~ 511 (952)
... ..+..+. +.|... .+++.+...+.. .....+.+||+|++|||+++||+||+|++.++|
T Consensus 124 ~~~~~~~~~~~~-~~L~~~g~~~~~~~~~~~~~~~-~~~~~~~r~H~K~~ViD~~~a~~Gg~Nl~~d~y----------- 190 (506)
T 1v0w_A 124 VYHMNVIPSKYR-DELTAKLGKAAENITLNVASMT-TSKTAFSWNHSKILVVDGQSALTGGINSWKDDY----------- 190 (506)
T ss_dssp --CCCCHHHHHH-HHHHHHHGGGGGGEEEEEEEEC-SBTTTTBCBCCCEEEETTTEEEEESCCCCHHHH-----------
T ss_pred ccccccCCHHHH-HHHHhcccceeecCcccccccc-ccCCccccceeeEEEECCcEEEeeccccCcccc-----------
Confidence 210 1122222 233321 133444311100 000123489999999999999999999963333
Q ss_pred CCcCCCCCCCCCCCCCCCCccccccccccCCCCCCCCeEEEEEEEEChHHHHHHHHHHHHHHhhhc
Q 002219 512 PLIWPGKDYYNPRESEPNSWEDTMRDELDRGKYPRMPWHDIHCALWGPPCRDVARHFVQRWNYAKR 577 (952)
Q Consensus 512 ~~~~~G~dY~n~~~~d~~~~~~~~~d~~dr~~~pr~pWhDv~~~v~Gpaa~dl~~~F~qrWn~~~~ 577 (952)
.+. ..+|||++++|+||+|.++++.|.++|+....
T Consensus 191 ---------~~~----------------------~~~~~D~~v~i~G~~v~~l~~~F~~~W~~~~~ 225 (506)
T 1v0w_A 191 ---------LDT----------------------THPVSDVDLALTGPAAGSAGRYLDTLWTWTCQ 225 (506)
T ss_dssp ---------TSS----------------------SSCCBEEEEEEESHHHHHHHHHHHHHHHHHHH
T ss_pred ---------ccC----------------------CCCceEEEEEEECHHHHHHHHHHHHHHhhhcc
Confidence 220 13799999999999999999999999998764
No 2
>3hsi_A Phosphatidylserine synthase; CDP- diacylglycerol--serine O-phosphatidyltransferase, structura genomics, PSI-2; HET: MSE; 2.20A {Haemophilus influenzae}
Probab=100.00 E-value=4.4e-36 Score=346.82 Aligned_cols=361 Identities=13% Similarity=0.112 Sum_probs=224.1
Q ss_pred CCCeEEEEecHHHHHHHHHHHHHhcccEEEEeeecCCceeEEEcCCCCchhHHHHHHHHHHhhC--CcEEEEEEccc---
Q 002219 361 DGSQAQWFVDGKAAFEAIASSIEDAKSEIFICGWWLCPELYLRRPFHNHASSRLDALLEAKAKQ--GVQIYILLYKE--- 435 (952)
Q Consensus 361 ~gn~v~~lvdG~~~f~al~~aI~~Ak~~I~I~~W~lsPe~Yl~rp~~d~~~~rL~~~L~~aA~r--GVkVrILl~d~--- 435 (952)
.||.+++|.+|.++|++++++|++||++|+| ++|++.+ |..+..|.++|.+||+| ||+||||+++.
T Consensus 25 ~~n~v~~l~~g~~~~~~l~~~I~~A~~~I~i-------~~~~~~~--d~~g~~l~~aL~~aa~r~~GV~Vril~D~~~~~ 95 (458)
T 3hsi_A 25 QAEQIEFLGSSAEFKTQIIELIRNAKKRIYV-------TALYWQK--DEAGQEILDEIYRVKQENPHLDVKVLIDWHRAQ 95 (458)
T ss_dssp CGGGEEECCCHHHHHHHHHHHHHTCSSEEEE-------EESCBCS--SHHHHHHHHHHHHHHHHSTTCEEEEEEETTGGG
T ss_pred cCCeEEEEeCHHHHHHHHHHHHHhcCCEEEE-------EEEEEec--CcHHHHHHHHHHHHHhcCCCCEEEEEEECcccc
Confidence 5899999999999999999999999999999 5677764 77889999999999999 99999997542
Q ss_pred ---hhhhhhc-chhhhHHHHhccCCCeEEE--Ec--CCCcCCCcccccCcceEEEEeCCeEEEccccCCCCCcCCCCCCC
Q 002219 436 ---VALALKI-NSVYSKRKLLSIHENVRVL--RY--PDHFASGVYLWSHHEKLVIVDYQICFIGGLDLCFGRYDTFEHKI 507 (952)
Q Consensus 436 ---~~~~l~~-~s~~~k~~L~~l~~gI~V~--r~--P~~~~~~~~~~rhHrKivVIDg~vAFvGGiNL~~gRwDt~~H~l 507 (952)
+|+.... +..+. ..|.+.++||+|. .| |..+ ...+.++|+|++||||+++ +||+||
T Consensus 96 r~~~g~~~~~~~~~~~-~~L~~~g~nv~v~~~~f~~p~~~--~~~~~r~H~Ki~viD~~v~-~~G~Ni------------ 159 (458)
T 3hsi_A 96 RNLLGAEKSATNADWY-CEQRQTYQLPDDPNMFFGVPINT--REVFGVLHVKGFVFDDTVL-YSGASI------------ 159 (458)
T ss_dssp SCCC-----CCHHHHH-HHHHHHHTCTTCCCCEEEECSSS--SGGGCCEECCEEEETTEEE-EESCCB------------
T ss_pred ccccccccccccHHHH-HHHHhhCCCceEeeeecCCcccc--ccccCcceeeEEEECCCEE-EEeeec------------
Confidence 2222100 11222 3454445556665 55 5432 2456799999999999995 555999
Q ss_pred CCCCCCcCCCCCCCCCCCCCCCCccccccccccCCCCCCCCeEEEEEEEEChHHHHHHHHHHHH--HHhhhcCCCCCCCC
Q 002219 508 GDNPPLIWPGKDYYNPRESEPNSWEDTMRDELDRGKYPRMPWHDIHCALWGPPCRDVARHFVQR--WNYAKRNKAPNEET 585 (952)
Q Consensus 508 ~D~~~~~~~G~dY~n~~~~d~~~~~~~~~d~~dr~~~pr~pWhDv~~~v~Gpaa~dl~~~F~qr--Wn~~~~~k~~~~~~ 585 (952)
+++|++.. .....|+|+. +.||+++|....|+++ |+... .
T Consensus 160 ---------~d~y~~~~-------------------~~~~~drd~~--i~g~~~~D~~~~~~~~~~~~g~~---v----- 201 (458)
T 3hsi_A 160 ---------NNVYLHQF-------------------EKYRYDRYQK--ITHAELADSMVNFINDYLLDFSA---V----- 201 (458)
T ss_dssp ---------STTTTTCS-------------------SCCEECCEEE--EECHHHHHHHHHHHHHTTCCTTT---C-----
T ss_pred ---------CHHHhcCC-------------------cccCcchhhh--hcCchHHHHHHHHHHhhhhcCcc---c-----
Confidence 46676521 1123588844 8999999999999654 43211 0
Q ss_pred ccccCCccccccccccCCcchhhhcccccccccccccccccccccCccCCCCCCCCCCCccccCCCCCCcCCCCCccccc
Q 002219 586 IPLLMPQHQMVIPHYMGRSREVEVESKNVEDNSKSIKRQDSFTFRSSLQDIPLLLPQEPEVLDDSSRGLIPNGLDYTTTK 665 (952)
Q Consensus 586 ~p~l~P~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~p~l~p~~~~~~~~~~~~~~~~~~~~~~~~ 665 (952)
.++ .....+ ..++... .... +.
T Consensus 202 ~~l----~~~~~~----~~~~~~~----------~~~~---~~------------------------------------- 223 (458)
T 3hsi_A 202 YPL----DVTNRP----RTKEIRG----------NIRA---YR------------------------------------- 223 (458)
T ss_dssp EES----SSSCCC----CGGGTHH----------HHHH---HH-------------------------------------
T ss_pred hhh----HHHhcc----cchhhHH----------HHHH---HH-------------------------------------
Confidence 000 000000 0000000 0000 00
Q ss_pred ccccccccccccccccCCCCCCccCCCCCCCcccccccccccCCCCCCCCchhhhhcccCCccCCCCccCCCCCCCCceE
Q 002219 666 SASFRYQKAKIEPVVTDMPMKGFVDDRDSPHHHLKTSLDVMTLPGTKSSDIEWWETQERGDQVGSTDETGQVGPRASCRC 745 (952)
Q Consensus 666 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 745 (952)
..+. .. .... |. . ...+...+
T Consensus 224 -~~l~-------~~-~~~~----------------------------------~~---------------~-~~~~~~~~ 244 (458)
T 3hsi_A 224 -KDLA-------QN-GEYS----------------------------------LK---------------S-AVKLPNVL 244 (458)
T ss_dssp -HHHH-------HH-CCCC----------------------------------CS---------------S-CBSSCSSC
T ss_pred -Hhhh-------hc-cccc----------------------------------cc---------------c-cCCCCceE
Confidence 0000 00 0000 00 0 00011234
Q ss_pred EEee-cCCcccCCCcccHHHHHHHHHHHHHhccCeEEEEeeeeccCCCCChhHHHHHHHHHHHHHHHHHHcCCceEEEEE
Q 002219 746 QIIR-SVSQWSAGTSQLEESIHCAYCSLIEKAEHFIYIENQFFISGLSGDEIIRNRVLESLYRRILRAYNEKKCFRVIIV 824 (952)
Q Consensus 746 QilR-S~~~wS~G~~~~E~sI~~ayl~~I~~A~~~IYIEnqyFis~~~~~~~v~n~I~~AL~~RI~~A~~~g~~vrV~Iv 824 (952)
|+.. +.+ | ..+..|..+|+++|.+|++.|||+|+||+++. .+.+||. .|+++| |+|.||
T Consensus 245 ~v~p~~~~----~--~~~~~i~~~~~~lI~~A~~~I~I~tpYf~p~~--------~~~~aL~----~Aa~rG--V~VrIi 304 (458)
T 3hsi_A 245 SVSPLFGL----G--ASGNELNQVIEDLFLQVQKKLVICTPYFNFPR--------TLQHKIA----TLLENG--KRVEII 304 (458)
T ss_dssp EEEEEEEE----S--SSSCHHHHHHHHHHHTCSSEEEEECSSSCCCH--------HHHHHHH----HHHTTT--CEEEEE
T ss_pred EEecCCCC----C--CchhHHHHHHHHHHHhcccEEEEEEeccCCCH--------HHHHHHH----HHHHCC--CeEEEE
Confidence 5544 211 2 23568999999999999999999999999973 6888886 888899 666667
Q ss_pred ecCC--CCCCCCCCCC--CchhHHHHHHHHHHHHHhhHHHHHHHHHHhcC---CCcccccccccccccccccCCCCcccc
Q 002219 825 IPLL--PGFQGGVDDG--GAASVRAIMHWQYRTICRGQNSILHNLYALLG---PKTHDYISFYGLRAYGRLFEDGPVATS 897 (952)
Q Consensus 825 lPl~--pgf~g~~~d~--~~~~~r~i~~~qy~ti~rg~~si~~~L~~~~G---v~~~~Yi~f~~lr~~~~~~~~g~~~te 897 (952)
+|.. .+|.+.-+.. ...+ +. ..|..+.+.-..-+..|.+ .| +.+++| +
T Consensus 305 ~~~~~and~y~~~~~~~~~~~~-~~---~lye~~~~~f~~~~~~l~~-~G~i~V~i~~~--------------------~ 359 (458)
T 3hsi_A 305 VGDKVANDFYIPPEQPFKMAGA-LP---YLYESNLRRFCEKFETQIE-SGQLVVRLWRD--------------------G 359 (458)
T ss_dssp EECGGGSTTCCCTTSCCCGGGG-HH---HHHHHHHHHHHHHTHHHHH-HTSEEEEEECB--------------------T
T ss_pred ECCccccCCccCCcchhhhhcc-hH---HHHHHhhhhhHHHHHHHHh-CCCeEEEEEec--------------------C
Confidence 8876 2322111000 0111 10 1111111111111345666 56 444332 2
Q ss_pred cceeeeeEEEEeCcEEEEecccCCcCccCCCCCcceEEEEEchh--hHHHhhh
Q 002219 898 QVYVHSKVMIIDDSIALIGSANINDRSLLGSRDSEVSVGLYLFI--LRWELTD 948 (952)
Q Consensus 898 ~iyvHSKlmIVDD~~~iIGSANin~RSm~G~rDsEi~v~i~d~~--~~~~~~~ 948 (952)
..++|+|+|||||++++|||+|+|.||+ .+|.|++++|+|+. ++.+|.+
T Consensus 360 ~~~lHaK~~vvD~~~~~vGS~N~d~RS~--~lN~E~~~~i~~~~~~l~~~l~~ 410 (458)
T 3hsi_A 360 DNTYHLKGVWVDDRYILLTGNNLNPRAW--RLDAENGLLIYDPQQQLLAQVEK 410 (458)
T ss_dssp TBEECCCEEEETTTEEEEECCCCSHHHH--HTCEEEEEEEECTTCSSHHHHHH
T ss_pred CCceeEEEEEECCeEEEecCCCCCcchh--hhCceeEEEEeCCcHHHHHHHHH
Confidence 4689999999999999999999999999 89999999999997 8888765
No 3
>1xdp_A Polyphosphate kinase; PPK, PPK complex with AMPPNP, AMPPNP, transferase; HET: ATP; 2.50A {Escherichia coli} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4 PDB: 1xdo_A*
Probab=99.91 E-value=8.6e-24 Score=253.62 Aligned_cols=141 Identities=18% Similarity=0.134 Sum_probs=107.1
Q ss_pred EEEecHHHHHHHHHHHHHhccc-----EEEEeeecCCceeEEEcCCCCchhHHHHHHHHHHhhCCcEEEEEEccchhhhh
Q 002219 366 QWFVDGKAAFEAIASSIEDAKS-----EIFICGWWLCPELYLRRPFHNHASSRLDALLEAKAKQGVQIYILLYKEVALAL 440 (952)
Q Consensus 366 ~~lvdG~~~f~al~~aI~~Ak~-----~I~I~~W~lsPe~Yl~rp~~d~~~~rL~~~L~~aA~rGVkVrILl~d~~~~~l 440 (952)
.++.++.+.|+.+++.|++|++ +|+|+ +|++.+ +..+.++|++||++||+|+||+ +..+...
T Consensus 340 ~ll~~P~~sf~~v~~~I~~A~~dp~v~~I~it-------~Y~~~~-----d~~I~~AL~~AA~rGV~VrVLv-d~~a~~~ 406 (687)
T 1xdp_A 340 VLLYYPYHTFEHVLELLRQASFDPSVLAIKIN-------IYRVAK-----DSRIIDSMIHAAHNGKKVTVVV-ELQARFD 406 (687)
T ss_dssp EEEEETTBCTHHHHHHHHHHHHCTTEEEEEEE-------ESSCCT-----TCHHHHHHHHHHHTTCEEEEEE-CTTCSST
T ss_pred EEEECchhhhhhHHHHHHHHhhCCcceEEEEE-------eeeecC-----cHHHHHHHHHHHhcCCEEEEEE-CCCcccc
Confidence 4677788889999999999997 99994 565532 4789999999999999999997 4444211
Q ss_pred -hcchhhhHHHHhccCCCeEEEEcCCCcCCCcccccCcceEEEEe----CCe---EEEccccCCCCCcCCCCCCCCCCCC
Q 002219 441 -KINSVYSKRKLLSIHENVRVLRYPDHFASGVYLWSHHEKLVIVD----YQI---CFIGGLDLCFGRYDTFEHKIGDNPP 512 (952)
Q Consensus 441 -~~~s~~~k~~L~~l~~gI~V~r~P~~~~~~~~~~rhHrKivVID----g~v---AFvGGiNL~~gRwDt~~H~l~D~~~ 512 (952)
..+..|. +.|.+ +||+|..+.. .+++|+|++||| +++ ||+||.|+...
T Consensus 407 ~~~n~~~~-~~L~~--aGV~V~~~~~-------~~k~H~Ki~VID~re~~~i~~~a~iGS~N~d~r-------------- 462 (687)
T 1xdp_A 407 EEANIHWA-KRLTE--AGVHVIFSAP-------GLKIHAKLFLISRKENGEVVRYAHIGTGNFNEK-------------- 462 (687)
T ss_dssp TTTTTTTT-HHHHH--HTCEEEECCT-------TCEECCEEEEEEEEETTEEEEEEEEESSCSCTT--------------
T ss_pred hhhHHHHH-HHHHH--CCCEEEEecC-------CccccceEEEEEeccCCeEEEEEEEeCCcCCcc--------------
Confidence 1122343 44543 7999976532 246999999999 577 99999998311
Q ss_pred CcCCCCCCCCCCCCCCCCccccccccccCCCCCCCCeEEEEEEEECh-HHHHHHHHHHHHHHhh
Q 002219 513 LIWPGKDYYNPRESEPNSWEDTMRDELDRGKYPRMPWHDIHCALWGP-PCRDVARHFVQRWNYA 575 (952)
Q Consensus 513 ~~~~G~dY~n~~~~d~~~~~~~~~d~~dr~~~pr~pWhDv~~~v~Gp-aa~dl~~~F~qrWn~~ 575 (952)
.-..|+|+++.+.|| .|.+++..|.++|+..
T Consensus 463 --------------------------------s~~~n~D~~l~i~~~~i~~~l~~~F~~~~~~s 494 (687)
T 1xdp_A 463 --------------------------------TARLYTDYSLLTADARITNEVRRVFNFIENPY 494 (687)
T ss_dssp --------------------------------GGGTEEEEEEEECCHHHHHHHHHHHHHHHCTT
T ss_pred --------------------------------hhhhcceEEEEEeCHHHHHHHHHHHHHHHhhc
Confidence 012489999999987 5899999999999764
No 4
>2o8r_A Polyphosphate kinase; structural genomics, protein structure initiative, PSI, nysgrc, NEW YORK structural genomics research consortium; HET: MSE; 2.70A {Porphyromonas gingivalis} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4
Probab=99.89 E-value=1.1e-22 Score=242.87 Aligned_cols=282 Identities=17% Similarity=0.209 Sum_probs=195.7
Q ss_pred EEEecHHHHHHHHHHHHHhccc-----EEEEeeecCCceeEEEcCCCCchhHHHHHHHHHHhhCCcEEEEEEccchhhhh
Q 002219 366 QWFVDGKAAFEAIASSIEDAKS-----EIFICGWWLCPELYLRRPFHNHASSRLDALLEAKAKQGVQIYILLYKEVALAL 440 (952)
Q Consensus 366 ~~lvdG~~~f~al~~aI~~Ak~-----~I~I~~W~lsPe~Yl~rp~~d~~~~rL~~~L~~aA~rGVkVrILl~d~~~~~l 440 (952)
.++.++.+.|+.++++|++|++ +|.+ ++|++.+ +.+|.++|++||++||+|+||+ | .++..
T Consensus 345 iLl~~p~~sf~~vi~~I~~A~~DP~V~sIk~-------tlYr~~~-----ds~Iv~ALi~AA~rGv~V~vLv-e-l~arf 410 (705)
T 2o8r_A 345 YLIHVPYYTYDYVVRLLMEAAISPDVSEIRL-------TQYRVAE-----NSSIISALEAAAQSGKKVSVFV-E-LKARF 410 (705)
T ss_dssp EEEEETTBCSHHHHHHHHHHHTCTTEEEEEE-------EESCCCS-----CCHHHHHHHHHHHTTCEEEEEE-C-CCSCC
T ss_pred eEeeChhHhHHHHHHHHHHhccCCCceEEEE-------EEEEEcC-----CHHHHHHHHHHHHCCCEEEEEE-e-CCCCc
Confidence 4788899999999999999999 9999 6787763 2889999999999999999997 4 44332
Q ss_pred h--cchhhhHHHHhccCCCeEEEEcCCCcCCCcccccCcceEEEEeCC--eEEEccccCCCCCcCCCCCCCCCCCCCcCC
Q 002219 441 K--INSVYSKRKLLSIHENVRVLRYPDHFASGVYLWSHHEKLVIVDYQ--ICFIGGLDLCFGRYDTFEHKIGDNPPLIWP 516 (952)
Q Consensus 441 ~--~~s~~~k~~L~~l~~gI~V~r~P~~~~~~~~~~rhHrKivVIDg~--vAFvGGiNL~~gRwDt~~H~l~D~~~~~~~ 516 (952)
. -|..|. +.|.+ +||+|... ..++++|+|++|||++ ++ ||+ .||= |.
T Consensus 411 dee~ni~wa-~~Le~--aGv~Vv~g-------~~~lk~H~Ki~lIdrr~~~~--g~~----~~y~---~i---------- 461 (705)
T 2o8r_A 411 DEENNLRLS-ERMRR--SGIRIVYS-------MPGLKVHAKTALILYHTPAG--ERP----QGIA---LL---------- 461 (705)
T ss_dssp ----CHHHH-HHHHH--HTCEEEEC-------CTTCCBCCCEEEEEECCCSS--SCC----CEEE---EE----------
T ss_pred chhhhHHHH-HHHHH--CCCEEEEc-------cCCCCceeEEEEEecccccC--Cce----eEEE---ec----------
Confidence 1 144454 45554 79998642 1357899999999998 76 554 1110 00
Q ss_pred CCCCCCCCCCCCCCccccccccccCCCCCCCCeEEEEEEEEChH-HHHHHHHHHHHHHhhhcCCCCCCCCccccCCcccc
Q 002219 517 GKDYYNPRESEPNSWEDTMRDELDRGKYPRMPWHDIHCALWGPP-CRDVARHFVQRWNYAKRNKAPNEETIPLLMPQHQM 595 (952)
Q Consensus 517 G~dY~n~~~~d~~~~~~~~~d~~dr~~~pr~pWhDv~~~v~Gpa-a~dl~~~F~qrWn~~~~~k~~~~~~~p~l~P~~~~ 595 (952)
|--.+|. .+-+ -|.|+++.+.+|. +.|++..|...|... . |.
T Consensus 462 gtGN~n~-------------------~tar-iy~D~~l~t~~~~i~~dl~~vF~~~tg~~----~----------~~--- 504 (705)
T 2o8r_A 462 STGNFNE-------------------TTAR-IYSDTTLMTANTDIVHDVYRLFRILDGDP----E----------PA--- 504 (705)
T ss_dssp ESSCSSC-------------------CCSS-CEEEEEEEECCHHHHHHHHHHHHHHTTCC----C----------CS---
T ss_pred cccceee-------------------eEEE-EEeeeeeeecChHHHHHHHHHHHHHhCCC----C----------CC---
Confidence 0001110 1112 3899999999875 699999995555321 0 00
Q ss_pred ccccccCCcchhhhcccccccccccccccccccccCccCCCCCCCCCCCccccCCCCCCcCCCCCccccccccccccccc
Q 002219 596 VIPHYMGRSREVEVESKNVEDNSKSIKRQDSFTFRSSLQDIPLLLPQEPEVLDDSSRGLIPNGLDYTTTKSASFRYQKAK 675 (952)
Q Consensus 596 ~~~~y~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~p~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (952)
..
T Consensus 505 ---------------------------------------~~--------------------------------------- 506 (705)
T 2o8r_A 505 ---------------------------------------RF--------------------------------------- 506 (705)
T ss_dssp ---------------------------------------CC---------------------------------------
T ss_pred ---------------------------------------Cc---------------------------------------
Confidence 00
Q ss_pred ccccccCCCCCCccCCCCCCCcccccccccccCCCCCCCCchhhhhcccCCccCCCCccCCCCCCCCceEEEeecCCccc
Q 002219 676 IEPVVTDMPMKGFVDDRDSPHHHLKTSLDVMTLPGTKSSDIEWWETQERGDQVGSTDETGQVGPRASCRCQIIRSVSQWS 755 (952)
Q Consensus 676 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vQilRS~~~wS 755 (952)
.|++-
T Consensus 507 ---------------------------------------------------------------------~~l~~------ 511 (705)
T 2o8r_A 507 ---------------------------------------------------------------------SRLLV------ 511 (705)
T ss_dssp ---------------------------------------------------------------------SSCEE------
T ss_pred ---------------------------------------------------------------------eEEEE------
Confidence 01111
Q ss_pred CCCcccHHHHHHHHHHHHHhccC----eEEEEeeeeccCCCCChhHHHHHHHHHHHHHHHHHHcCCceEEEE--EecCCC
Q 002219 756 AGTSQLEESIHCAYCSLIEKAEH----FIYIENQFFISGLSGDEIIRNRVLESLYRRILRAYNEKKCFRVII--VIPLLP 829 (952)
Q Consensus 756 ~G~~~~E~sI~~ayl~~I~~A~~----~IYIEnqyFis~~~~~~~v~n~I~~AL~~RI~~A~~~g~~vrV~I--vlPl~p 829 (952)
|+......|.+.+..+|.+|++ +|+|.++| +++. .|.+||+ +|+.+|++|+++| +..+.|
T Consensus 512 -sP~~~~~~i~~~i~~eI~~Ak~G~~a~I~ik~n~-l~D~--------~ii~aL~----~As~~GV~V~LIVRGiC~L~P 577 (705)
T 2o8r_A 512 -ARYNMGEAITNLIEREIENVKRGKRGYMLLKMNG-LQDK--------NVITQLY----RASEAGVEIDLIVRGICCLVP 577 (705)
T ss_dssp -TTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEESC-BCCH--------HHHHHHH----HHHHTTCEEEEEESSCBCSCC
T ss_pred -CCchHHHHHHHHHHHHHHHHhcCCCCEEEEEcCC-CCCH--------HHHHHHH----HHHHCCCeEEEEEccccccCC
Confidence 1223456899999999999999 99999998 7763 6889998 9999996666654 224445
Q ss_pred CCCCCCCCCCchhHHHHHHHHHHHHHhhHHHHHHHHHHhcCCCcccccccccccccccccCCCCcccccceeeeeEEEE-
Q 002219 830 GFQGGVDDGGAASVRAIMHWQYRTICRGQNSILHNLYALLGPKTHDYISFYGLRAYGRLFEDGPVATSQVYVHSKVMII- 908 (952)
Q Consensus 830 gf~g~~~d~~~~~~r~i~~~qy~ti~rg~~si~~~L~~~~Gv~~~~Yi~f~~lr~~~~~~~~g~~~te~iyvHSKlmIV- 908 (952)
|.+ ++| .+.+ .+++ | ...=|+|+++.
T Consensus 578 gv~--~sd--------------------------------ni~V---~Siv----------g------r~Leh~RIy~f~ 604 (705)
T 2o8r_A 578 DMP--QSR--------------------------------NIRV---TRLV----------D------MYLEHSRIWCFH 604 (705)
T ss_dssp SSG--GGT--------------------------------TEEE---EECC----------S------SSEECCCEEEEC
T ss_pred CCC--CCC--------------------------------CeEE---EeeH----------H------HHHhcCEEEEEE
Confidence 411 111 0111 1121 1 12448888888
Q ss_pred --eCcEEEEecccCCcCccCCCCCcceEEEEEchhhHHHhhhc
Q 002219 909 --DDSIALIGSANINDRSLLGSRDSEVSVGLYLFILRWELTDL 949 (952)
Q Consensus 909 --DD~~~iIGSANin~RSm~G~rDsEi~v~i~d~~~~~~~~~~ 949 (952)
||.+++||||||+.||| .++.|+++.|+|++++.+|.++
T Consensus 605 ~gd~~~~~IGSAn~m~Rnl--~~r~Ev~~~i~d~~~~~~l~~i 645 (705)
T 2o8r_A 605 NGGKEEVFISSADWMKRNL--YNRIETACPVLDPTLRREIIDI 645 (705)
T ss_dssp GGGSCEEEEESCCBCHHHH--HTSBCEEEECCSHHHHHHHHHH
T ss_pred CCCCcEEEEeccccchhhh--hheeEEEEEEcCHHHHHHHHHH
Confidence 99999999999999999 9999999999999999999763
No 5
>4ggj_A Mitochondrial cardiolipin hydrolase; piRNA pathway, protein-RNA interactions, piRNA RNAI, HKD MOT zinc finger, nuclease, nucleic acid binding; 1.75A {Mus musculus} PDB: 4ggk_A
Probab=99.64 E-value=1.7e-16 Score=163.81 Aligned_cols=144 Identities=17% Similarity=0.187 Sum_probs=103.1
Q ss_pred CCeEEEEecHHHHHHHHHHHHHhcccEEEEeeecCCceeEEEcCCCCchhHHHHHHHHHHhhCCcEEEEEEccchhhhhh
Q 002219 362 GSQAQWFVDGKAAFEAIASSIEDAKSEIFICGWWLCPELYLRRPFHNHASSRLDALLEAKAKQGVQIYILLYKEVALALK 441 (952)
Q Consensus 362 gn~v~~lvdG~~~f~al~~aI~~Ak~~I~I~~W~lsPe~Yl~rp~~d~~~~rL~~~L~~aA~rGVkVrILl~d~~~~~l~ 441 (952)
++....|.+|++.|.+|+++|++||++|+| ++|++. ...|.++|.+||+|||+||||+++.. ...
T Consensus 35 ~~~~~~~~~~~~~~~~ll~~I~~A~~sI~i-------~~y~~~------~~~i~~aL~~aa~rGV~Vrii~D~~~-~~~- 99 (196)
T 4ggj_A 35 SGCPCSLPHSESSLSRLLRALLAARSSLEL-------CLFAFS------SPQLGRAVQLLHQRGVRVRVITDCDY-MAL- 99 (196)
T ss_dssp --CCCSSCCSCCHHHHHHHHHHTCSSEEEE-------EESCBC------CHHHHHHHHHHHHTTCEEEEEESSCC-C---
T ss_pred CCceeecCCcHHHHHHHHHHHHHhheEEEE-------EEEEeC------CHHHHHHHHHHHHcCCcEEEEEeccc-ccc-
Confidence 344556789999999999999999999999 567775 36799999999999999999974322 111
Q ss_pred cchhhhHHHHhccCCCeEEEEcCCCcCCCcccccCcceEEEEeCCeEEEccccCCCCCcCCCCCCCCCCCCCcCCCCCCC
Q 002219 442 INSVYSKRKLLSIHENVRVLRYPDHFASGVYLWSHHEKLVIVDYQICFIGGLDLCFGRYDTFEHKIGDNPPLIWPGKDYY 521 (952)
Q Consensus 442 ~~s~~~k~~L~~l~~gI~V~r~P~~~~~~~~~~rhHrKivVIDg~vAFvGGiNL~~gRwDt~~H~l~D~~~~~~~G~dY~ 521 (952)
-.+.+ ..|. .+||+|..+.. ....|+|++|||++++++||+|++...+
T Consensus 100 ~~~~~--~~l~--~~gi~v~~~~~-------~~~~H~K~~viD~~~~~~GS~N~t~~~~--------------------- 147 (196)
T 4ggj_A 100 NGSQI--GLLR--KAGIQVRHDQD-------LGYMHHKFAIVDKKVLITGSLNWTTQAI--------------------- 147 (196)
T ss_dssp -CCHH--HHHH--HTTCEEEECCS-------SSCCCCEEEEETTTEEEEESCCBCHHHH---------------------
T ss_pred cHHHH--HHHH--hcCCCcccccc-------cccccCcEEEEcceEEEecCccCChhhh---------------------
Confidence 11222 3344 37999875421 1357999999999999999999841100
Q ss_pred CCCCCCCCCccccccccccCCCCCCCCeEEEEEEEEC-hHHHHHHHHHHHHHHhhhc
Q 002219 522 NPRESEPNSWEDTMRDELDRGKYPRMPWHDIHCALWG-PPCRDVARHFVQRWNYAKR 577 (952)
Q Consensus 522 n~~~~d~~~~~~~~~d~~dr~~~pr~pWhDv~~~v~G-paa~dl~~~F~qrWn~~~~ 577 (952)
...| +..+.+.+ +.|..+...|.++|+....
T Consensus 148 ------------------------~~n~-E~~~~i~~~~~~~~~~~~F~~~W~~~~p 179 (196)
T 4ggj_A 148 ------------------------QNNR-ENVLIMEDTEYVRLFLEEFERIWEEFDP 179 (196)
T ss_dssp ------------------------HHCC-EEEEEECCHHHHHHHHHHHHHHHHHTCC
T ss_pred ------------------------cccc-eeEEEEECHHHHHHHHHHHHHHHHhCCC
Confidence 0113 44555554 5689999999999997653
No 6
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A
Probab=99.60 E-value=3.3e-15 Score=146.54 Aligned_cols=127 Identities=21% Similarity=0.200 Sum_probs=98.5
Q ss_pred HHHHHHHHHHHHHhccCeEEEEeeeeccCCCCChhHHHHHHHHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCCCCCch
Q 002219 762 EESIHCAYCSLIEKAEHFIYIENQFFISGLSGDEIIRNRVLESLYRRILRAYNEKKCFRVIIVIPLLPGFQGGVDDGGAA 841 (952)
Q Consensus 762 E~sI~~ayl~~I~~A~~~IYIEnqyFis~~~~~~~v~n~I~~AL~~RI~~A~~~g~~vrV~IvlPl~pgf~g~~~d~~~~ 841 (952)
+.++.++++++|.+|+++|+|+++|| ++ ..|.+||. +|+++| |+|.|+++..+. . ..
T Consensus 12 ~~~~~~~~~~~i~~A~~~I~i~~~~~-~~--------~~i~~aL~----~a~~rG--V~Vril~~~~~~----~---~~- 68 (155)
T 1byr_A 12 EGSARVLVLSAIDSAKTSIRMMAYSF-TA--------PDIMKALV----AAKKRG--VDVKIVIDERGN----T---GR- 68 (155)
T ss_dssp TTHHHHHHHHHHHHCSSEEEEEESSB-CC--------HHHHHHHH----HHHHTT--CEEEEEEESTTC----C---SH-
T ss_pred CCcHHHHHHHHHHHHhhEEEEEEEEe-CC--------HHHHHHHH----HHHHCC--CEEEEEEeCccc----c---cc-
Confidence 34789999999999999999999887 33 25777776 888899 666666884432 1 00
Q ss_pred hHHHHHHHHHHHHHhhHHHHHHHHHHhcCCCcccccccccccccccccCCCCcccccceeeeeEEEEeCcEEEEecccCC
Q 002219 842 SVRAIMHWQYRTICRGQNSILHNLYALLGPKTHDYISFYGLRAYGRLFEDGPVATSQVYVHSKVMIIDDSIALIGSANIN 921 (952)
Q Consensus 842 ~~r~i~~~qy~ti~rg~~si~~~L~~~~Gv~~~~Yi~f~~lr~~~~~~~~g~~~te~iyvHSKlmIVDD~~~iIGSANin 921 (952)
...+++..|.+ .|+++..|- ....+|+|++||||+++++||+|++
T Consensus 69 ---------------~~~~~~~~L~~-~gv~v~~~~-------------------~~~~~H~K~~iiD~~~~~iGS~N~~ 113 (155)
T 1byr_A 69 ---------------ASIAAMNYIAN-SGIPLRTDS-------------------NFPIQHDKVIIVDNVTVETGSFNFT 113 (155)
T ss_dssp ---------------HHHHHHHHHHH-TTCCEEEEC-------------------SSSCCCCCEEEETTTEEEEESCCBS
T ss_pred ---------------ccHHHHHHHHH-CCCeEEEcC-------------------CcccccceEEEECCCEEEEECCCCC
Confidence 13456777887 788764320 0237999999999999999999999
Q ss_pred cCccCCCCCcceEEEEEc-hhhHHHhhh
Q 002219 922 DRSLLGSRDSEVSVGLYL-FILRWELTD 948 (952)
Q Consensus 922 ~RSm~G~rDsEi~v~i~d-~~~~~~~~~ 948 (952)
.||+ ..|.|.++.|.+ |+++.++.+
T Consensus 114 ~~~~--~~n~E~~~~i~~~~~l~~~~~~ 139 (155)
T 1byr_A 114 KAAE--TKNSENAVVIWNMPKLAESFLE 139 (155)
T ss_dssp HHHH--HTSCEEEEEEESCHHHHHHHHH
T ss_pred cccc--ccCcccEEEEcCcHHHHHHHHH
Confidence 9999 789999999999 699888765
No 7
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A
Probab=99.56 E-value=1.6e-14 Score=141.64 Aligned_cols=143 Identities=17% Similarity=0.244 Sum_probs=104.2
Q ss_pred eEEEEe-cHHHHHHHHHHHHHhcccEEEEeeecCCceeEEEcCCCCchhHHHHHHHHHHhhCCcEEEEEEccchhhhhhc
Q 002219 364 QAQWFV-DGKAAFEAIASSIEDAKSEIFICGWWLCPELYLRRPFHNHASSRLDALLEAKAKQGVQIYILLYKEVALALKI 442 (952)
Q Consensus 364 ~v~~lv-dG~~~f~al~~aI~~Ak~~I~I~~W~lsPe~Yl~rp~~d~~~~rL~~~L~~aA~rGVkVrILl~d~~~~~l~~ 442 (952)
.++++. .+.+++..+.++|++|+++|+|+.+++ . ...|.++|.+|++|||+|+||+.+. +.....
T Consensus 4 ~v~~~f~p~~~~~~~~~~~i~~A~~~I~i~~~~~-------~------~~~i~~aL~~a~~rGV~Vril~~~~-~~~~~~ 69 (155)
T 1byr_A 4 SVQVGYSPEGSARVLVLSAIDSAKTSIRMMAYSF-------T------APDIMKALVAAKKRGVDVKIVIDER-GNTGRA 69 (155)
T ss_dssp EEEEEEETTTHHHHHHHHHHHHCSSEEEEEESSB-------C------CHHHHHHHHHHHHTTCEEEEEEEST-TCCSHH
T ss_pred ceEEEECCCCcHHHHHHHHHHHHhhEEEEEEEEe-------C------CHHHHHHHHHHHHCCCEEEEEEeCc-cccccc
Confidence 455555 456789999999999999999975433 2 2579999999999999999997543 211000
Q ss_pred chhhhHHHHhccCCCeEEEEcCCCcCCCcccccCcceEEEEeCCeEEEccccCCCCCcCCCCCCCCCCCCCcCCCCCCCC
Q 002219 443 NSVYSKRKLLSIHENVRVLRYPDHFASGVYLWSHHEKLVIVDYQICFIGGLDLCFGRYDTFEHKIGDNPPLIWPGKDYYN 522 (952)
Q Consensus 443 ~s~~~k~~L~~l~~gI~V~r~P~~~~~~~~~~rhHrKivVIDg~vAFvGGiNL~~gRwDt~~H~l~D~~~~~~~G~dY~n 522 (952)
+..+. ..|. .+|++|..+.. ...+|.|++|||++++++||.|+...
T Consensus 70 ~~~~~-~~L~--~~gv~v~~~~~-------~~~~H~K~~iiD~~~~~iGS~N~~~~------------------------ 115 (155)
T 1byr_A 70 SIAAM-NYIA--NSGIPLRTDSN-------FPIQHDKVIIVDNVTVETGSFNFTKA------------------------ 115 (155)
T ss_dssp HHHHH-HHHH--HTTCCEEEECS-------SSCCCCCEEEETTTEEEEESCCBSHH------------------------
T ss_pred cHHHH-HHHH--HCCCeEEEcCC-------cccccceEEEECCCEEEEECCCCCcc------------------------
Confidence 11111 3343 36888876532 12589999999999999999999410
Q ss_pred CCCCCCCCccccccccccCCCCCCCCeEEEEEEEECh--HHHHHHHHHHHHHHhhh
Q 002219 523 PRESEPNSWEDTMRDELDRGKYPRMPWHDIHCALWGP--PCRDVARHFVQRWNYAK 576 (952)
Q Consensus 523 ~~~~d~~~~~~~~~d~~dr~~~pr~pWhDv~~~v~Gp--aa~dl~~~F~qrWn~~~ 576 (952)
....|++.++.+.|+ .|.++...|.+.|+.+.
T Consensus 116 ----------------------~~~~n~E~~~~i~~~~~l~~~~~~~f~~~w~~~~ 149 (155)
T 1byr_A 116 ----------------------AETKNSENAVVIWNMPKLAESFLEHWQDRWNQGR 149 (155)
T ss_dssp ----------------------HHHTSCEEEEEEESCHHHHHHHHHHHHHHHHTCE
T ss_pred ----------------------ccccCcccEEEEcCcHHHHHHHHHHHHHHHHhCC
Confidence 012467899999994 78999999999998764
No 8
>4ggj_A Mitochondrial cardiolipin hydrolase; piRNA pathway, protein-RNA interactions, piRNA RNAI, HKD MOT zinc finger, nuclease, nucleic acid binding; 1.75A {Mus musculus} PDB: 4ggk_A
Probab=99.54 E-value=7.5e-15 Score=151.53 Aligned_cols=123 Identities=15% Similarity=0.108 Sum_probs=93.3
Q ss_pred HHHHHHHHHHHhccCeEEEEeeeeccCCCCChhHHHHHHHHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCCCCCchhH
Q 002219 764 SIHCAYCSLIEKAEHFIYIENQFFISGLSGDEIIRNRVLESLYRRILRAYNEKKCFRVIIVIPLLPGFQGGVDDGGAASV 843 (952)
Q Consensus 764 sI~~ayl~~I~~A~~~IYIEnqyFis~~~~~~~v~n~I~~AL~~RI~~A~~~g~~vrV~IvlPl~pgf~g~~~d~~~~~~ 843 (952)
+...+++++|.+|+++|+|+. |++++. .|++||. +|+++|++|||+ +.. ++ ...
T Consensus 46 ~~~~~ll~~I~~A~~sI~i~~-y~~~~~--------~i~~aL~----~aa~rGV~Vrii--~D~--~~---~~~------ 99 (196)
T 4ggj_A 46 SSLSRLLRALLAARSSLELCL-FAFSSP--------QLGRAVQ----LLHQRGVRVRVI--TDC--DY---MAL------ 99 (196)
T ss_dssp CHHHHHHHHHHTCSSEEEEEE-SCBCCH--------HHHHHHH----HHHHTTCEEEEE--ESS--CC---C--------
T ss_pred HHHHHHHHHHHHhheEEEEEE-EEeCCH--------HHHHHHH----HHHHcCCcEEEE--Eec--cc---ccc------
Confidence 566889999999999999997 666652 6888987 899999666655 431 11 000
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHhcCCCcccccccccccccccccCCCCcccccceeeeeEEEEeCcEEEEecccCCcC
Q 002219 844 RAIMHWQYRTICRGQNSILHNLYALLGPKTHDYISFYGLRAYGRLFEDGPVATSQVYVHSKVMIIDDSIALIGSANINDR 923 (952)
Q Consensus 844 r~i~~~qy~ti~rg~~si~~~L~~~~Gv~~~~Yi~f~~lr~~~~~~~~g~~~te~iyvHSKlmIVDD~~~iIGSANin~R 923 (952)
..+.+..|.+ +|+++..+ . ...++|+|+|||||+++++||+|++.+
T Consensus 100 --------------~~~~~~~l~~-~gi~v~~~--------------~-----~~~~~H~K~~viD~~~~~~GS~N~t~~ 145 (196)
T 4ggj_A 100 --------------NGSQIGLLRK-AGIQVRHD--------------Q-----DLGYMHHKFAIVDKKVLITGSLNWTTQ 145 (196)
T ss_dssp ---------------CCHHHHHHH-TTCEEEEC--------------C-----SSSCCCCEEEEETTTEEEEESCCBCHH
T ss_pred --------------cHHHHHHHHh-cCCCcccc--------------c-----ccccccCcEEEEcceEEEecCccCChh
Confidence 1233566777 78765321 0 124689999999999999999999999
Q ss_pred ccCCCCCcceEEEEEchhhHHHhhh
Q 002219 924 SLLGSRDSEVSVGLYLFILRWELTD 948 (952)
Q Consensus 924 Sm~G~rDsEi~v~i~d~~~~~~~~~ 948 (952)
|+ ..|.|..+++.|++++.++.+
T Consensus 146 ~~--~~n~E~~~~i~~~~~~~~~~~ 168 (196)
T 4ggj_A 146 AI--QNNRENVLIMEDTEYVRLFLE 168 (196)
T ss_dssp HH--HHCCEEEEEECCHHHHHHHHH
T ss_pred hh--cccceeEEEEECHHHHHHHHH
Confidence 99 789999999999999988764
No 9
>4gel_A Mitochondrial cardiolipin hydrolase; piRNA, phospholipase D, nuclease; 1.76A {Drosophila melanogaster} PDB: 4gem_A 4gen_A
Probab=99.49 E-value=3.1e-14 Score=148.11 Aligned_cols=145 Identities=15% Similarity=0.076 Sum_probs=102.9
Q ss_pred ecHHHHHHHHHHHHHhcccEEEEeeecCCceeEEEcCCCCchhHHHHHHHHHHhhCCcEEEEEEccchhhhhhcchhhhH
Q 002219 369 VDGKAAFEAIASSIEDAKSEIFICGWWLCPELYLRRPFHNHASSRLDALLEAKAKQGVQIYILLYKEVALALKINSVYSK 448 (952)
Q Consensus 369 vdG~~~f~al~~aI~~Ak~~I~I~~W~lsPe~Yl~rp~~d~~~~rL~~~L~~aA~rGVkVrILl~d~~~~~l~~~s~~~k 448 (952)
..+.+.++.|+++|++||++|+| ++|++. ...|.++|.+||+|||+||||+ |..+... ..+.+
T Consensus 54 ~~~~~~~~~ii~~I~~A~~sI~i-------~~Y~~~------~~~I~~aL~~Aa~RGV~VRii~-D~~~~~~-~~~~~-- 116 (220)
T 4gel_A 54 HCSLRNVAKIVEQIDRAVYSIDL-------AIYTFT------SLFLADSIKRALQRGVIIRIIS-DGEMVYS-KGSQI-- 116 (220)
T ss_dssp TCHHHHHHHHHHHHHTCSSEEEE-------ECSCBC------CHHHHHHHHHHHHHTCEEEEEC-CTTTTTS-TTCHH--
T ss_pred cCcHHHHHHHHHHHHHhhhEEEE-------EEEEeC------CHHHHHHHHHHHHcCCeEEEEE-echhhhh-hHHHH--
Confidence 45789999999999999999999 577775 3679999999999999999997 4433221 11222
Q ss_pred HHHhccCCCeEEEEc-CCCcC------------CCcccccCcceEEEEeCCeEEEccccCCCCCcCCCCCCCCCCCCCcC
Q 002219 449 RKLLSIHENVRVLRY-PDHFA------------SGVYLWSHHEKLVIVDYQICFIGGLDLCFGRYDTFEHKIGDNPPLIW 515 (952)
Q Consensus 449 ~~L~~l~~gI~V~r~-P~~~~------------~~~~~~rhHrKivVIDg~vAFvGGiNL~~gRwDt~~H~l~D~~~~~~ 515 (952)
..+.. +++.+... +.... ....+.++|+|++|+|+.++++||+|+...
T Consensus 117 ~~~~~--~~~~~~~~~~~~~~h~K~~viD~~~~~~~~~~~~H~K~~v~D~~~v~~GS~N~t~~----------------- 177 (220)
T 4gel_A 117 SMLAQ--LGVPVRVPITTNLMHNKFCIIDGFERVEEIRLLRKLKFMRPCYSIVISGSVNWTAL----------------- 177 (220)
T ss_dssp HHHHH--TTCCEEECCSSSCBCCCEEEESCHHHHHHHHHHTTCSCCCCCCCEEEEESCCBSHH-----------------
T ss_pred HHHHh--cCCcEEeecccccccceeEEEcchhcccccccccceeccccccceEEecCcccccc-----------------
Confidence 22322 45544432 21110 011345788888888899999999998410
Q ss_pred CCCCCCCCCCCCCCCccccccccccCCCCCCCCeEEEEEEEEChHHHHHHHHHHHHHHhhhc
Q 002219 516 PGKDYYNPRESEPNSWEDTMRDELDRGKYPRMPWHDIHCALWGPPCRDVARHFVQRWNYAKR 577 (952)
Q Consensus 516 ~G~dY~n~~~~d~~~~~~~~~d~~dr~~~pr~pWhDv~~~v~Gpaa~dl~~~F~qrWn~~~~ 577 (952)
.-...|.|+.+...|++|.++++.|.+.|+....
T Consensus 178 ----------------------------s~~~N~E~~~vi~~~~~a~~~~~~F~~~W~~~~~ 211 (220)
T 4gel_A 178 ----------------------------GLGGNWENCIITADDKLTATFQAEFQRMWRAFAK 211 (220)
T ss_dssp ----------------------------HHHTSBEEEEEECCHHHHHHHHHHHHHHHHHSEE
T ss_pred ----------------------------ccccCceEEEEEECHHHHHHHHHHHHHHHHhccC
Confidence 0013588998888899999999999999997643
No 10
>1xdp_A Polyphosphate kinase; PPK, PPK complex with AMPPNP, AMPPNP, transferase; HET: ATP; 2.50A {Escherichia coli} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4 PDB: 1xdo_A*
Probab=99.32 E-value=2.1e-12 Score=155.30 Aligned_cols=125 Identities=20% Similarity=0.242 Sum_probs=95.6
Q ss_pred HHHHHHHHhccC-----eEEEEeeeeccCCCCChhHHHHHHHHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCCCCCch
Q 002219 767 CAYCSLIEKAEH-----FIYIENQFFISGLSGDEIIRNRVLESLYRRILRAYNEKKCFRVIIVIPLLPGFQGGVDDGGAA 841 (952)
Q Consensus 767 ~ayl~~I~~A~~-----~IYIEnqyFis~~~~~~~v~n~I~~AL~~RI~~A~~~g~~vrV~IvlPl~pgf~g~~~d~~~~ 841 (952)
.+++++|.+|++ .|+| ++||+++. ..|.+||. +|+++| ++|.|++|..+.|... +
T Consensus 350 ~~v~~~I~~A~~dp~v~~I~i-t~Y~~~~d-------~~I~~AL~----~AA~rG--V~VrVLvd~~a~~~~~-----~- 409 (687)
T 1xdp_A 350 EHVLELLRQASFDPSVLAIKI-NIYRVAKD-------SRIIDSMI----HAAHNG--KKVTVVVELQARFDEE-----A- 409 (687)
T ss_dssp HHHHHHHHHHHHCTTEEEEEE-EESSCCTT-------CHHHHHHH----HHHHTT--CEEEEEECTTCSSTTT-----T-
T ss_pred hhHHHHHHHHhhCCcceEEEE-EeeeecCc-------HHHHHHHH----HHHhcC--CEEEEEECCCcccchh-----h-
Confidence 457889999997 9999 89999432 27999997 999999 5566668977643211 0
Q ss_pred hHHHHHHHHHHHHHhhHHHHHHHHHHhcCCCcccccccccccccccccCCCCcccccceeeeeEEEEe----CcE---EE
Q 002219 842 SVRAIMHWQYRTICRGQNSILHNLYALLGPKTHDYISFYGLRAYGRLFEDGPVATSQVYVHSKVMIID----DSI---AL 914 (952)
Q Consensus 842 ~~r~i~~~qy~ti~rg~~si~~~L~~~~Gv~~~~Yi~f~~lr~~~~~~~~g~~~te~iyvHSKlmIVD----D~~---~i 914 (952)
..+++.+|.+ +|+.+..|. . ...+|+|+|||| |++ ++
T Consensus 410 ----------------n~~~~~~L~~-aGV~V~~~~------------~-------~~k~H~Ki~VID~re~~~i~~~a~ 453 (687)
T 1xdp_A 410 ----------------NIHWAKRLTE-AGVHVIFSA------------P-------GLKIHAKLFLISRKENGEVVRYAH 453 (687)
T ss_dssp ----------------TTTTTHHHHH-HTCEEEECC------------T-------TCEECCEEEEEEEEETTEEEEEEE
T ss_pred ----------------HHHHHHHHHH-CCCEEEEec------------C-------CccccceEEEEEeccCCeEEEEEE
Confidence 1234577887 798764331 1 134999999999 455 99
Q ss_pred EecccCCcCccCCCCCcceEEEEEchhhHHHhhhc
Q 002219 915 IGSANINDRSLLGSRDSEVSVGLYLFILRWELTDL 949 (952)
Q Consensus 915 IGSANin~RSm~G~rDsEi~v~i~d~~~~~~~~~~ 949 (952)
|||+|+|.||+ ..++|+++.+.+++++.+|.++
T Consensus 454 iGS~N~d~rs~--~~n~D~~l~i~~~~i~~~l~~~ 486 (687)
T 1xdp_A 454 IGTGNFNEKTA--RLYTDYSLLTADARITNEVRRV 486 (687)
T ss_dssp EESSCSCTTGG--GTEEEEEEEECCHHHHHHHHHH
T ss_pred EeCCcCCcchh--hhcceEEEEEeCHHHHHHHHHH
Confidence 99999999999 8999999999999999888653
No 11
>4gel_A Mitochondrial cardiolipin hydrolase; piRNA, phospholipase D, nuclease; 1.76A {Drosophila melanogaster} PDB: 4gem_A 4gen_A
Probab=99.26 E-value=1e-11 Score=129.12 Aligned_cols=141 Identities=18% Similarity=0.040 Sum_probs=90.5
Q ss_pred HHHHHHHHHHHHhccCeEEEEeeeeccCCCCChhHHHHHHHHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCCCCCchh
Q 002219 763 ESIHCAYCSLIEKAEHFIYIENQFFISGLSGDEIIRNRVLESLYRRILRAYNEKKCFRVIIVIPLLPGFQGGVDDGGAAS 842 (952)
Q Consensus 763 ~sI~~ayl~~I~~A~~~IYIEnqyFis~~~~~~~v~n~I~~AL~~RI~~A~~~g~~vrV~IvlPl~pgf~g~~~d~~~~~ 842 (952)
....+..+++|.+|++.|+|+. |++++. .|++||. +|++||++|||+ +..... ..
T Consensus 57 ~~~~~~ii~~I~~A~~sI~i~~-Y~~~~~--------~I~~aL~----~Aa~RGV~VRii--~D~~~~------~~---- 111 (220)
T 4gel_A 57 LRNVAKIVEQIDRAVYSIDLAI-YTFTSL--------FLADSIK----RALQRGVIIRII--SDGEMV------YS---- 111 (220)
T ss_dssp HHHHHHHHHHHHTCSSEEEEEC-SCBCCH--------HHHHHHH----HHHHHTCEEEEE--CCTTTT------TS----
T ss_pred HHHHHHHHHHHHHhhhEEEEEE-EEeCCH--------HHHHHHH----HHHHcCCeEEEE--Eechhh------hh----
Confidence 3556778999999999999996 777652 6888886 999999555554 542111 00
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHhcCCCcccccccccccccccc--cCCCC-cccccceeeeeEEEEeCcEEEEeccc
Q 002219 843 VRAIMHWQYRTICRGQNSILHNLYALLGPKTHDYISFYGLRAYGRL--FEDGP-VATSQVYVHSKVMIIDDSIALIGSAN 919 (952)
Q Consensus 843 ~r~i~~~qy~ti~rg~~si~~~L~~~~Gv~~~~Yi~f~~lr~~~~~--~~~g~-~~te~iyvHSKlmIVDD~~~iIGSAN 919 (952)
..+.+..|.. .|+....+. .....|.+. .++.. ...-....|.|++++|+.++++||+|
T Consensus 112 ---------------~~~~~~~~~~-~~~~~~~~~--~~~~~h~K~~viD~~~~~~~~~~~~H~K~~v~D~~~v~~GS~N 173 (220)
T 4gel_A 112 ---------------KGSQISMLAQ-LGVPVRVPI--TTNLMHNKFCIIDGFERVEEIRLLRKLKFMRPCYSIVISGSVN 173 (220)
T ss_dssp ---------------TTCHHHHHHH-TTCCEEECC--SSSCBCCCEEEESCHHHHHHHHHHTTCSCCCCCCCEEEEESCC
T ss_pred ---------------hHHHHHHHHh-cCCcEEeec--ccccccceeEEEcchhcccccccccceeccccccceEEecCcc
Confidence 1112344555 454432211 111111111 00000 00112356777777888999999999
Q ss_pred CCcCccCCCCCcceEEEEEchhhHHHhhh
Q 002219 920 INDRSLLGSRDSEVSVGLYLFILRWELTD 948 (952)
Q Consensus 920 in~RSm~G~rDsEi~v~i~d~~~~~~~~~ 948 (952)
++.+|+ ..|.|..+++.+++++.++.+
T Consensus 174 ~t~~s~--~~N~E~~~vi~~~~~a~~~~~ 200 (220)
T 4gel_A 174 WTALGL--GGNWENCIITADDKLTATFQA 200 (220)
T ss_dssp BSHHHH--HTSBEEEEEECCHHHHHHHHH
T ss_pred cccccc--ccCceEEEEEECHHHHHHHHH
Confidence 999999 789999999999999998765
No 12
>3hsi_A Phosphatidylserine synthase; CDP- diacylglycerol--serine O-phosphatidyltransferase, structura genomics, PSI-2; HET: MSE; 2.20A {Haemophilus influenzae}
Probab=99.11 E-value=5.1e-10 Score=129.52 Aligned_cols=156 Identities=15% Similarity=0.155 Sum_probs=100.1
Q ss_pred CceEEEeecCCcccCCCcccHHHHHHHHHHHHHhccCeEEEEeeeeccCCCCChhHHHHHHHHHHHHHHHHHHcCCceEE
Q 002219 742 SCRCQIIRSVSQWSAGTSQLEESIHCAYCSLIEKAEHFIYIENQFFISGLSGDEIIRNRVLESLYRRILRAYNEKKCFRV 821 (952)
Q Consensus 742 ~~~vQilRS~~~wS~G~~~~E~sI~~ayl~~I~~A~~~IYIEnqyFis~~~~~~~v~n~I~~AL~~RI~~A~~~g~~vrV 821 (952)
...++++.+. ...+.+++++|.+|+++|||++.||.++ .+.+.|.+||. +|++++++|+|
T Consensus 26 ~n~v~~l~~g-----------~~~~~~l~~~I~~A~~~I~i~~~~~~~d-----~~g~~l~~aL~----~aa~r~~GV~V 85 (458)
T 3hsi_A 26 AEQIEFLGSS-----------AEFKTQIIELIRNAKKRIYVTALYWQKD-----EAGQEILDEIY----RVKQENPHLDV 85 (458)
T ss_dssp GGGEEECCCH-----------HHHHHHHHHHHHTCSSEEEEEESCBCSS-----HHHHHHHHHHH----HHHHHSTTCEE
T ss_pred CCeEEEEeCH-----------HHHHHHHHHHHHhcCCEEEEEEEEEecC-----cHHHHHHHHHH----HHHhcCCCCEE
Confidence 3468888652 2688999999999999999999888765 34455666665 89999445888
Q ss_pred EEEecCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhHHHHHHHHHHhcC-CCcc--cccccccccccccccCCCCccccc
Q 002219 822 IIVIPLLPGFQGGVDDGGAASVRAIMHWQYRTICRGQNSILHNLYALLG-PKTH--DYISFYGLRAYGRLFEDGPVATSQ 898 (952)
Q Consensus 822 ~IvlPl~pgf~g~~~d~~~~~~r~i~~~qy~ti~rg~~si~~~L~~~~G-v~~~--~Yi~f~~lr~~~~~~~~g~~~te~ 898 (952)
.|+++...+--|.++ +... .+..+++..|.++.| +++. -|- +.++.. + -.
T Consensus 86 ril~D~~~~~r~~~g---~~~~------------~~~~~~~~~L~~~g~nv~v~~~~f~--~p~~~~-~---------~~ 138 (458)
T 3hsi_A 86 KVLIDWHRAQRNLLG---AEKS------------ATNADWYCEQRQTYQLPDDPNMFFG--VPINTR-E---------VF 138 (458)
T ss_dssp EEEEETTGGGSCCC--------------------CCHHHHHHHHHHHHTCTTCCCCEEE--ECSSSS-G---------GG
T ss_pred EEEEECccccccccc---cccc------------cccHHHHHHHHhhCCCceEeeeecC--Cccccc-c---------cc
Confidence 888996543222121 1000 113467888877333 5554 331 111211 1 13
Q ss_pred ceeeeeEEEEeCcEEEEecccCCcCccCCC--CCcceEEEEEchhhHHH
Q 002219 899 VYVHSKVMIIDDSIALIGSANINDRSLLGS--RDSEVSVGLYLFILRWE 945 (952)
Q Consensus 899 iyvHSKlmIVDD~~~iIGSANin~RSm~G~--rDsEi~v~i~d~~~~~~ 945 (952)
...|.|++||||++++.| +||+++++... ...--.++|.++.++.-
T Consensus 139 ~r~H~Ki~viD~~v~~~G-~Ni~d~y~~~~~~~~~drd~~i~g~~~~D~ 186 (458)
T 3hsi_A 139 GVLHVKGFVFDDTVLYSG-ASINNVYLHQFEKYRYDRYQKITHAELADS 186 (458)
T ss_dssp CCEECCEEEETTEEEEES-CCBSTTTTTCSSCCEECCEEEEECHHHHHH
T ss_pred CcceeeEEEECCCEEEEe-eecCHHHhcCCcccCcchhhhhcCchHHHH
Confidence 479999999999997777 99999998321 11233467888876554
No 13
>1v0w_A Phospholipase D; hydrolase, substrate SOAK, dibutyrylphosphatidylcholine, DIC4PC; 1.35A {Streptomyces SP} SCOP: d.136.1.2 d.136.1.2 PDB: 1v0s_A 1v0r_A 1v0t_A 1v0v_A 1v0u_A 1v0y_A* 1f0i_A 2ze4_A* 2ze9_A*
Probab=99.02 E-value=1.3e-09 Score=127.47 Aligned_cols=144 Identities=17% Similarity=0.178 Sum_probs=93.3
Q ss_pred HHHHHHHHHHHHhccCeEEEEeeeeccCCCCChhHHHHHHHHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCCCCCchh
Q 002219 763 ESIHCAYCSLIEKAEHFIYIENQFFISGLSGDEIIRNRVLESLYRRILRAYNEKKCFRVIIVIPLLPGFQGGVDDGGAAS 842 (952)
Q Consensus 763 ~sI~~ayl~~I~~A~~~IYIEnqyFis~~~~~~~v~n~I~~AL~~RI~~A~~~g~~vrV~IvlPl~pgf~g~~~d~~~~~ 842 (952)
..++.+++++|.+|+++|||+..+|+.+ +.+.+.|.+||. +|+++|++|+|.|++...+.+. ...
T Consensus 65 ~~~~~~l~~~I~~Ak~~I~i~~y~~~~~----d~~g~~i~~aL~----~aa~rGp~V~Vril~D~~g~~~-------~~~ 129 (506)
T 1v0w_A 65 KRLLAKMTENIGNATRTVDISTLAPFPN----GAFQDAIVAGLK----ESAAKGNKLKVRILVGAAPVYH-------MNV 129 (506)
T ss_dssp HHHHHHHHHHHHTCSSEEEEEEESSCCC----HHHHHHHHHHHH----HHHHTTCCEEEEEEEECCC--C-------CCC
T ss_pred HHHHHHHHHHHHHhccEEEEEEeeccCC----ChHHHHHHHHHH----HHHhCCCCcEEEEEEeCccccc-------ccc
Confidence 5799999999999999999996432132 344566777775 8999998888888887433210 000
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHhcCCCcccccccccccccccccCCCCcccccceeeeeEEEEeCcEEEEecccC-C
Q 002219 843 VRAIMHWQYRTICRGQNSILHNLYALLGPKTHDYISFYGLRAYGRLFEDGPVATSQVYVHSKVMIIDDSIALIGSANI-N 921 (952)
Q Consensus 843 ~r~i~~~qy~ti~rg~~si~~~L~~~~Gv~~~~Yi~f~~lr~~~~~~~~g~~~te~iyvHSKlmIVDD~~~iIGSANi-n 921 (952)
. ..+++..|.+ .|+....++.+.. ..+... . +.....|.|++|||++++++||+|| +
T Consensus 130 ~--------------~~~~~~~L~~-~g~~~~~~~~~~~-~~~~~~--~----~~~~r~H~K~~ViD~~~a~~Gg~Nl~~ 187 (506)
T 1v0w_A 130 I--------------PSKYRDELTA-KLGKAAENITLNV-ASMTTS--K----TAFSWNHSKILVVDGQSALTGGINSWK 187 (506)
T ss_dssp H--------------HHHHHHHHHH-HHGGGGGGEEEEE-EEECSB--T----TTTBCBCCCEEEETTTEEEEESCCCCH
T ss_pred C--------------CHHHHHHHHh-cccceeecCcccc-cccccc--C----CccccceeeEEEECCcEEEeeccccCc
Confidence 0 2356677877 4555433443321 011000 0 0123799999999999999999999 6
Q ss_pred cCccCCC-CCcceEEEEEchhhH
Q 002219 922 DRSLLGS-RDSEVSVGLYLFILR 943 (952)
Q Consensus 922 ~RSm~G~-rDsEi~v~i~d~~~~ 943 (952)
++.+... .-.++.+.|.+|.++
T Consensus 188 d~y~~~~~~~~D~~v~i~G~~v~ 210 (506)
T 1v0w_A 188 DDYLDTTHPVSDVDLALTGPAAG 210 (506)
T ss_dssp HHHTSSSSCCBEEEEEEESHHHH
T ss_pred cccccCCCCceEEEEEEECHHHH
Confidence 6666111 237889999987643
No 14
>1h6h_A Neutrophil cytosol factor 4; PX domain; HET: PIB; 1.7A {Homo sapiens} SCOP: d.189.1.1
Probab=98.92 E-value=2.6e-09 Score=104.74 Aligned_cols=116 Identities=18% Similarity=0.269 Sum_probs=81.2
Q ss_pred CC-eEEEeeeeecCCCCCCcceeEEEEEEEe-cceEEEEEEehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 002219 43 LP-KASIVSVSRPDAGDISPMLLSYTIEVQY-KQFKWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEWLQNLGMGD 120 (952)
Q Consensus 43 ~p-~v~I~~~er~~s~~~~~~~~~Y~Iel~~-g~~~W~v~r~~~~f~~Lh~~lk~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (952)
.| +|+|+++++..+.. .+++|.|+++. +...|+|.|+|+||..||.+|+. .+|...
T Consensus 19 ~~i~v~I~~~e~~~~~~---~~~vY~I~v~~~~~~~~~V~RRYsdF~~Lh~~L~~-------------------~~p~~~ 76 (143)
T 1h6h_A 19 VAISANIADIEEKRGFT---SHFVFVIEVKTKGGSKYLIYRRYRQFHALQSKLEE-------------------RFGPDS 76 (143)
T ss_dssp CEEEEEEEEEEEECSSS---CEEEEEEEEEETTSCEEEEEEEHHHHHHHHHHHHH-------------------HHSTTC
T ss_pred CeEEEEEcCccccCCCC---CeEEEEEEEEEcCCCEEEEEeeHHHHHHHHHHHHH-------------------HCcccc
Confidence 45 79999998644332 47899999984 47899999999999999998884 112100
Q ss_pred CccccccCccccccccccccccccCCCCCCCCCCCCCCccccCCCcchHHHHHHHHHHHHHHhccc-cccchhhhheeee
Q 002219 121 HMAVVQEDDEGDEIAVNHDESSKKRDVPANAALPVIRPALGRQHSMSDRAKVAMQQYLNHFLGNMD-IVNSREVCKFLEA 199 (952)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~lp~~~~~~~~~~~~~~r~~~~LE~YL~~lL~~~~-~~n~~~l~~Flev 199 (952)
. . ....+.+|. ||.- ..+++...+.+.|+..||.||+.|+..+. +.++..+.+||+.
T Consensus 77 ~---~---------------~~~~~~lP~---lP~K-~~~~~~~~~ie~Rr~~Le~yL~~ll~~p~~l~~s~~~~~Fl~~ 134 (143)
T 1h6h_A 77 K---S---------------SALACTLPT---LPAK-VYVGVKQEIAEMRIPALNAYMKSLLSLPVWVLMDEDVRIFFYQ 134 (143)
T ss_dssp S---C---------------GGGCCCCCC---CCCC-CCSSCHHHHHHHHHHHHHHHHHHHTTSCHHHHTCHHHHHHHSC
T ss_pred c---c---------------CCCCCCccc---CCCC-cccCcCHHHHHHHHHHHHHHHHHHHcCCHhhhcCHHHHHHhCC
Confidence 0 0 012234555 6542 12333334445566899999999998887 7899999999998
Q ss_pred ccC
Q 002219 200 SKL 202 (952)
Q Consensus 200 S~~ 202 (952)
+.-
T Consensus 135 ~~~ 137 (143)
T 1h6h_A 135 SPY 137 (143)
T ss_dssp CHH
T ss_pred Ccc
Confidence 764
No 15
>3p0c_A Nischarin; structural genomics, structural genomics consortium, SGC, PX signaling protein; 2.27A {Homo sapiens}
Probab=98.92 E-value=5e-09 Score=101.43 Aligned_cols=104 Identities=21% Similarity=0.336 Sum_probs=75.1
Q ss_pred eEEEeeeeecCCCCCCcceeEEEEEEEecceEEEEEEehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccc
Q 002219 45 KASIVSVSRPDAGDISPMLLSYTIEVQYKQFKWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEWLQNLGMGDHMAV 124 (952)
Q Consensus 45 ~v~I~~~er~~s~~~~~~~~~Y~Iel~~g~~~W~v~r~~~~f~~Lh~~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (952)
+++|++.+...+ +++|+|+++.+.-.|+|.|||+||..||.+|+. ..|+.
T Consensus 24 ~v~I~~~~~~~~------y~~Y~I~v~~~~~~~~V~RRYSdF~~L~~~L~~-------------------~~~~~----- 73 (130)
T 3p0c_A 24 EARVVGSELVDT------YTVYIIQVTDGSHEWTVKHRYSDFHDLHEKLVA-------------------ERKID----- 73 (130)
T ss_dssp EEEEEEEECSSS------SCEEEEEEECSSCEEEEEEEHHHHHHHHHHHHH-------------------TTSSC-----
T ss_pred EEEEEeccccCC------EEEEEEEEEECCeEEEEEehHHHHHHHHHHHHH-------------------HcCCC-----
Confidence 577777665433 789999999999999999999999999998884 11210
Q ss_pred cccCccccccccccccccccCCCCCCCCCCCCCCcccc-CCCcchHHHHHHHHHHHHHHhccccccchhhhheeeeccCC
Q 002219 125 VQEDDEGDEIAVNHDESSKKRDVPANAALPVIRPALGR-QHSMSDRAKVAMQQYLNHFLGNMDIVNSREVCKFLEASKLS 203 (952)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~lp~~~~~~~~-~~~~~~r~~~~LE~YL~~lL~~~~~~n~~~l~~FlevS~~s 203 (952)
.|. ||.- ..++. ...+-+.||.+||.||+.++..+.++++..+.+||+.+..+
T Consensus 74 ----------------------~p~---lP~K-~~~g~~~~~~ie~Rr~~Le~yL~~l~~~p~l~~s~~l~~FL~~~~~~ 127 (130)
T 3p0c_A 74 ----------------------KNL---LPPK-KIIGKNSRSLVEKREKDLEVYLQKLLAAFPGVTPRVLAHFLHFHFYE 127 (130)
T ss_dssp ----------------------TTS---CCCC-CCCSCCCSCSHHHHHHHHHHHHHHHHHTSCSEECHHHHHHHHSCTTC
T ss_pred ----------------------CCC---CCCc-cccccCCHHHHHHHHHHHHHHHHHHHcChhhhcCHHHHHHhCCCccc
Confidence 011 2211 11221 22344455679999999999999999999999999998776
Q ss_pred C
Q 002219 204 F 204 (952)
Q Consensus 204 f 204 (952)
+
T Consensus 128 ~ 128 (130)
T 3p0c_A 128 I 128 (130)
T ss_dssp -
T ss_pred c
Confidence 4
No 16
>4az9_A Sorting nexin-24; protein transport; 1.75A {Homo sapiens}
Probab=98.92 E-value=4.8e-09 Score=101.52 Aligned_cols=104 Identities=17% Similarity=0.200 Sum_probs=70.3
Q ss_pred eEEEeeeeecCCCCCCcceeEEEEEEEecceEEEEEEehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccc
Q 002219 45 KASIVSVSRPDAGDISPMLLSYTIEVQYKQFKWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEWLQNLGMGDHMAV 124 (952)
Q Consensus 45 ~v~I~~~er~~s~~~~~~~~~Y~Iel~~g~~~W~v~r~~~~f~~Lh~~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (952)
.|+|+++....++.. ..+++|.|+++.+.-+|+|.|||+||..||.+|+. ..+++.
T Consensus 24 ~V~Ip~~~~~~~~~~-k~y~vY~I~v~~~~~~w~V~RRYsdF~~L~~~L~~-------------------~~~~p~---- 79 (129)
T 4az9_A 24 EVYIPSFRYEESDLE-RGYTVFKIEVLMNGRKHFVEKRYSEFHALHKKLKK-------------------CIKTPE---- 79 (129)
T ss_dssp EEEEEEEEEECCTTS-CCEEEEEEEEEETTEEEEEEEEHHHHHHHHHHHTT-------------------TSCCCC----
T ss_pred EEEECcEEEEecCCC-CCEEEEEEEEEECCEEEEEEeeHHHHHHHHHHHHH-------------------hCCCCC----
Confidence 688888764443221 24899999999999999999999999999998862 122211
Q ss_pred cccCccccccccccccccccCCCCCCCCCCCCCCccccCCCcchHHHHHHHHHHHHHHhccccccchhhhheeeeccC
Q 002219 125 VQEDDEGDEIAVNHDESSKKRDVPANAALPVIRPALGRQHSMSDRAKVAMQQYLNHFLGNMDIVNSREVCKFLEASKL 202 (952)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~lp~~~~~~~~~~~~~~r~~~~LE~YL~~lL~~~~~~n~~~l~~FlevS~~ 202 (952)
+|... .....+.+-++||.+||.||+.++..+..+ +..+++||++..+
T Consensus 80 ----------------------------lP~K~-~~~~~~~~ie~Rr~~Le~yL~~ll~~~~~~-~~~l~~FL~~~~~ 127 (129)
T 4az9_A 80 ----------------------------IPSKH-VRNWVPKVLEQRRQGLETYLQAVILENEEL-PKLFLDFLNVRHL 127 (129)
T ss_dssp ----------------------------CCCSC-CSCCCHHHHHHHHHHHHHHHHHHHHHCSSC-CHHHHHHTTC---
T ss_pred ----------------------------CCccc-ccCCCHHHHHHHHHHHHHHHHHHHhCchhh-CHHHHHHCCCCCC
Confidence 22110 001112333455679999999999877764 6789999998654
No 17
>2ett_A Sorting nexin-22; PX domain, BC019655, SNX22_human, HS.157607, structural genomics,protein structure initiative PSI; NMR {Homo sapiens}
Probab=98.91 E-value=5.8e-09 Score=100.79 Aligned_cols=107 Identities=19% Similarity=0.278 Sum_probs=74.4
Q ss_pred CCC-eEEEeeeee--cCCCCCCcceeEEEEEEEecceEEEEEEehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 002219 42 ELP-KASIVSVSR--PDAGDISPMLLSYTIEVQYKQFKWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEWLQNLGM 118 (952)
Q Consensus 42 ~~p-~v~I~~~er--~~s~~~~~~~~~Y~Iel~~g~~~W~v~r~~~~f~~Lh~~lk~~~~~~~~~~~~~~~~~~~~~~~~ 118 (952)
|+| ++.+++.+- +.... ...+++|+|+++.+...|+|.|||+||..||.+|+. .+++
T Consensus 9 ~~~~~~~~vg~ev~Ip~~~~-~~~~~~Y~I~v~~~~~~~~V~RRYSdF~~Lh~~L~~-------------------~~~i 68 (128)
T 2ett_A 9 ELEVHIPSVGPEAEGPRQSP-EKSHMVFRVEVLCSGRRHTVPRRYSEFHALHKRIKK-------------------LYKV 68 (128)
T ss_dssp CEEEEEEEEESCCCCCSSCS-SCCCCEEEEEEEETTEEEEEEEEHHHHHHHHHHHHT-------------------TSSC
T ss_pred eecccccEEeeEEEeccccC-CCCEEEEEEEEEECCcEEEEECCHHHHHHHHHHHHH-------------------HCCC
Confidence 456 677777663 22211 124789999999999999999999999999998884 1233
Q ss_pred CCCccccccCccccccccccccccccCCCCCCCCCCCCCCccc-cCCCcchHHHHHHHHHHHHHHhccccccchhhhhee
Q 002219 119 GDHMAVVQEDDEGDEIAVNHDESSKKRDVPANAALPVIRPALG-RQHSMSDRAKVAMQQYLNHFLGNMDIVNSREVCKFL 197 (952)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~lp~~~~~~~-~~~~~~~r~~~~LE~YL~~lL~~~~~~n~~~l~~Fl 197 (952)
++ ||.-+ ++ -...+-+.||.+||.||+.++..+.++ +..+.+||
T Consensus 69 P~--------------------------------lP~K~--~~~~~~~~ie~Rr~~Le~yL~~ll~~p~~~-s~~l~~FL 113 (128)
T 2ett_A 69 PD--------------------------------FPSKR--LPNWRTRGLEQRRQGLEAYIQGILYLNQEV-PKELLEFL 113 (128)
T ss_dssp CC--------------------------------CCCSS--CCCSSSSCHHHHHHHHHHHHHHHHHHSSSS-CHHHHHHH
T ss_pred CC--------------------------------CCCCc--cCCCCHHHHHHHHHHHHHHHHHHHhCchhc-CHHHHHhc
Confidence 22 11100 11 112333445679999999999887776 68999999
Q ss_pred eeccCC
Q 002219 198 EASKLS 203 (952)
Q Consensus 198 evS~~s 203 (952)
+++.+.
T Consensus 114 ~~~~~~ 119 (128)
T 2ett_A 114 RLRHFP 119 (128)
T ss_dssp TCTTCC
T ss_pred CCccCC
Confidence 999875
No 18
>1kq6_A NCF-1, P47PHOX, neutrophil cytosol factor 1; alpha beta, PX domain, NADPH oxidase, protein binding; HET: MSE; 1.18A {Homo sapiens} SCOP: d.189.1.1 PDB: 1gd5_A 1o7k_A
Probab=98.89 E-value=5.3e-09 Score=102.46 Aligned_cols=128 Identities=12% Similarity=0.214 Sum_probs=85.5
Q ss_pred eEEEeeeee-cCCCCCCcceeEEEEEEEe-cceEEEEEEehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCc
Q 002219 45 KASIVSVSR-PDAGDISPMLLSYTIEVQY-KQFKWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEWLQNLGMGDHM 122 (952)
Q Consensus 45 ~v~I~~~er-~~s~~~~~~~~~Y~Iel~~-g~~~W~v~r~~~~f~~Lh~~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (952)
+|.|+++|+ .+.. .+++|.|+++. +.-.|+|.|+|+||..||.+|+. .+|....
T Consensus 8 ~v~V~~~ek~~~~~----~~~~Y~I~V~~~~~~~~~V~RRYsdF~~Lh~~L~~-------------------~fp~~~g- 63 (141)
T 1kq6_A 8 HIALLGFEKRFVPS----QHYVYMFLVKWQDLSEKVVYRRFTEIYEFHKTLKE-------------------MFPIEAG- 63 (141)
T ss_dssp EEEEEEEEEECSSS----CEEEEEEEEEETTCCEEEEEECHHHHHHHHHHHHH-------------------HCTTTTT-
T ss_pred EEEEccEEEecCCC----CeEEEEEEEEEcCCCEEEEEecHHHHHHHHHHHHH-------------------HCchhhc-
Confidence 799999984 4322 25679999996 34689999999999999998883 2332110
Q ss_pred cccccCccccccccccccccccCCCCCCCCCCCCCCccccCCCcchHHHHHHHHHHHHHHhccc-cccchhhhheeeecc
Q 002219 123 AVVQEDDEGDEIAVNHDESSKKRDVPANAALPVIRPALGRQHSMSDRAKVAMQQYLNHFLGNMD-IVNSREVCKFLEASK 201 (952)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~lp~~~~~~~~~~~~~~r~~~~LE~YL~~lL~~~~-~~n~~~l~~FlevS~ 201 (952)
. .....+.+|. ||.- ..+++ ..+.+.|+.+||.||+.||..+. ++++..+.+||+.++
T Consensus 64 -~---------------~~~~~~~lP~---lP~K-~~~~~-~~~~e~Rr~~Le~YL~~Ll~~p~~i~~s~~v~~Fl~~~~ 122 (141)
T 1kq6_A 64 -A---------------INPENRIIPH---LPAP-KWFDG-QRAAENRQGTLTEYCSTLMSLPTKISRCPHLLDFFKVRP 122 (141)
T ss_dssp -S---------------SCGGGCCSCC---CCCC-CCCCS-HHHHHHHHHHHHHHHHHHTTSCHHHHTCHHHHHHHSCCH
T ss_pred -c---------------cCccccccCC---CCCc-cccCC-HHHHHHHHHHHHHHHHHHHhCCHhhcCChHHHHHhCCCc
Confidence 0 0012244555 6642 12333 34555667899999999998765 789999999999988
Q ss_pred CCCCCCCC--CCcceeEE
Q 002219 202 LSFSPEYG--PKLKEDYV 217 (952)
Q Consensus 202 ~sf~~~~G--~KgKEG~l 217 (952)
--+.+..+ .|-.|-||
T Consensus 123 ~d~~~~~~~~~~~~~~~~ 140 (141)
T 1kq6_A 123 DDLKLPTDNQTKKPETYL 140 (141)
T ss_dssp HHHSCCCCTTSCCCEEEE
T ss_pred cccCCCCCCcCCCcceee
Confidence 87654332 23444443
No 19
>2v6v_A BUD emergence protein 1; homotypic fusion, regulator, PI3P, 3-kinase, PX domain, SH3 domain, cytoskeleton, cell polarity; 1.5A {Saccharomyces cerevisiae} PDB: 2czo_A
Probab=98.77 E-value=2.7e-08 Score=99.34 Aligned_cols=124 Identities=18% Similarity=0.197 Sum_probs=83.7
Q ss_pred CC-eEEEeeeeecCCCCCCcceeEEEEEEEe-cceEEEEEEehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 002219 43 LP-KASIVSVSRPDAGDISPMLLSYTIEVQY-KQFKWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEWLQNLGMGD 120 (952)
Q Consensus 43 ~p-~v~I~~~er~~s~~~~~~~~~Y~Iel~~-g~~~W~v~r~~~~f~~Lh~~lk~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (952)
.| +|+|.++...++ ..+|.|+++. +.-.|+|.|+|+||..||.+|+. .+|...
T Consensus 17 ~~~~~sI~~~~~~~~------~y~Y~I~V~~~d~~~~~V~RRYsdF~~Lh~~L~~-------------------~fP~e~ 71 (156)
T 2v6v_A 17 LLVKASVESFGLEDE------KYWFLVCCELSNGKTRQLKRYYQDFYDLQVQLLD-------------------AFPAEA 71 (156)
T ss_dssp CEEEEEEEEEEEETT------EEEEEEEEEETTSCEEEEEECHHHHHHHHHHHHH-------------------HCTTTT
T ss_pred cceEEEEeeEEEECC------EEEEEEEEEEcCCCEEEEEEEhHHHHHHHHHHHH-------------------Hcchhh
Confidence 45 799999886644 4569999998 45699999999999999998883 233210
Q ss_pred CccccccCccccccccccccccccCCCCCCCCCCCCCCccccCCCcchHHHHHHHHHHHHHHhccc-cccchhhhheeee
Q 002219 121 HMAVVQEDDEGDEIAVNHDESSKKRDVPANAALPVIRPALGRQHSMSDRAKVAMQQYLNHFLGNMD-IVNSREVCKFLEA 199 (952)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~lp~~~~~~~~~~~~~~r~~~~LE~YL~~lL~~~~-~~n~~~l~~Flev 199 (952)
. ...+ .....+++.+|. ||.- .+.....+...|+..||.||+.||..+. ++++..+++||+.
T Consensus 72 g--~~~~----------~~g~~~~~~lP~---LP~K--~~~~~~~~~e~Rr~~Le~YL~~Ll~lp~~i~~s~~v~~Ff~~ 134 (156)
T 2v6v_A 72 G--KLRD----------AGGQWSKRIMPY---IPGP--VPYVTNSITKKRKEDLNIYVADLVNLPDYISRSEMVHSLFVV 134 (156)
T ss_dssp T--CCBC----------TTCCBCCCCSCC---CCCC--CSSCCHHHHHHHHHHHHHHHHHHHTSCHHHHTSHHHHHTTSC
T ss_pred c--cccc----------ccccccccccCC---CCCC--cccCCHHHHHHHHHHHHHHHHHHHhCCccccCCHHHHHHhCC
Confidence 0 0000 000012345565 5532 2222345556667899999999997554 7899999999999
Q ss_pred ccCCCCCCC
Q 002219 200 SKLSFSPEY 208 (952)
Q Consensus 200 S~~sf~~~~ 208 (952)
+.-.+.+++
T Consensus 135 ~~~D~~~~~ 143 (156)
T 2v6v_A 135 LNNGFDREF 143 (156)
T ss_dssp CSSSSCEEE
T ss_pred CCccccccc
Confidence 987665443
No 20
>1xte_A Serine/threonine-protein kinase SGK3; CISK, PX domain, transferase; 1.60A {Mus musculus} SCOP: d.189.1.1 PDB: 1xtn_A
Probab=98.74 E-value=2.3e-08 Score=99.35 Aligned_cols=109 Identities=16% Similarity=0.299 Sum_probs=77.8
Q ss_pred CCeEEEeeeeecCCCCCCcceeEEEEEEEecceEEEEEEehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCc
Q 002219 43 LPKASIVSVSRPDAGDISPMLLSYTIEVQYKQFKWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEWLQNLGMGDHM 122 (952)
Q Consensus 43 ~p~v~I~~~er~~s~~~~~~~~~Y~Iel~~g~~~W~v~r~~~~f~~Lh~~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (952)
.++|+|++++....+. ..+++|+|+++.+.-.|+|.|||+||..||.+|+.. +.. . .+|+
T Consensus 7 ~~~v~I~~~~~~~~~~--~~~~~Y~I~v~~~~~~~~V~RRYsdF~~Lh~~L~~~------------~p~-~-~~pl---- 66 (154)
T 1xte_A 7 CPSVSIPSSDEHREKK--KRFTVYKVLVSVGRSEWFVFRRYAEFDKLYNSLKKQ------------FPA-M-ALKI---- 66 (154)
T ss_dssp CCEEEEEEEEEEEETT--EEEEEEEEEEEETTEEEEEEEEHHHHHHHHHHHHHH------------CGG-G-CCCC----
T ss_pred CCEEEECCcEEEecCC--CCEEEEEEEEEECCEEEEEEeeHHHHHHHHHHHHHH------------CCC-C-cccC----
Confidence 3589999998533221 258899999999999999999999999999998841 100 0 1222
Q ss_pred cccccCccccccccccccccccCCCCCCCCCCCCCCccc--cCCCcchHHHHHHHHHHHHHHhccccccchhhhheeeec
Q 002219 123 AVVQEDDEGDEIAVNHDESSKKRDVPANAALPVIRPALG--RQHSMSDRAKVAMQQYLNHFLGNMDIVNSREVCKFLEAS 200 (952)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~lp~~~~~~~--~~~~~~~r~~~~LE~YL~~lL~~~~~~n~~~l~~FlevS 200 (952)
|.- ..++ ....+...||..||.||+.|+..+.++++..+.+||+..
T Consensus 67 -------------------------------P~K-~~~g~~~~~~~ie~Rr~~Le~yL~~l~~~p~l~~s~~l~~FL~~~ 114 (154)
T 1xte_A 67 -------------------------------PAK-RIFGDNFDPDFIKQRRAGLNEFIQNLVRYPELYNHPDVRAFLQMD 114 (154)
T ss_dssp -------------------------------CCS-CCSSCTTCHHHHHHHHHHHHHHHHHHTTCHHHHTSHHHHHHTTTT
T ss_pred -------------------------------CCc-cccCCCCCHHHHHHHHHHHHHHHHHHHcChhhccChHHHHHhCCC
Confidence 110 0111 112233455679999999999999999999999999987
Q ss_pred cCC
Q 002219 201 KLS 203 (952)
Q Consensus 201 ~~s 203 (952)
...
T Consensus 115 ~~~ 117 (154)
T 1xte_A 115 SPR 117 (154)
T ss_dssp CGG
T ss_pred CCc
Confidence 654
No 21
>3lui_A Sorting nexin-17, SNX17; PX domain, endosome, phosphoprotein, P transport, transport; 1.80A {Homo sapiens} PDB: 3fog_A
Probab=98.69 E-value=2.4e-08 Score=94.48 Aligned_cols=107 Identities=16% Similarity=0.210 Sum_probs=71.7
Q ss_pred eEEEeeeeecCCCCCCcceeEEEEEEEecceEEEEEEehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccc
Q 002219 45 KASIVSVSRPDAGDISPMLLSYTIEVQYKQFKWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEWLQNLGMGDHMAV 124 (952)
Q Consensus 45 ~v~I~~~er~~s~~~~~~~~~Y~Iel~~g~~~W~v~r~~~~f~~Lh~~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (952)
++.|++++......-...+++|+|++. | .|+|.|||+||..||.+|+.. + ....+
T Consensus 5 ~v~Ip~~~~~~~~~g~~~y~~Y~I~v~-~--~~~V~RRYsdF~~L~~~L~~~------------~----~~~~~------ 59 (115)
T 3lui_A 5 HFSIPETESRSGDSGGSAYVAYNIHVN-G--VLHCRVRYSQLLGLHEQLRKE------------Y----GANVL------ 59 (115)
T ss_dssp CEEEEEEEEEC-----CCEEEEEEEET-T--EEEEEEEHHHHHHHHHHHHHH------------H----CSTTS------
T ss_pred EEEECCeEEecCCCCCCCEEEEEEEEC-C--eEEEEecHHHHHHHHHHHHHH------------c----CCCcC------
Confidence 588999885432110124899999985 3 799999999999999988840 1 01111
Q ss_pred cccCccccccccccccccccCCCCCCCCCCCCCCccccCCCcchHHHHHHHHHHHHHHhccccccchhhhheeeeccCC
Q 002219 125 VQEDDEGDEIAVNHDESSKKRDVPANAALPVIRPALGRQHSMSDRAKVAMQQYLNHFLGNMDIVNSREVCKFLEASKLS 203 (952)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~lp~~~~~~~~~~~~~~r~~~~LE~YL~~lL~~~~~~n~~~l~~FlevS~~s 203 (952)
|. ||.-+ .++.....-+.||.+||.||+.++..+.++++..+.+||+.++..
T Consensus 60 -----------------------P~---lP~K~-~~~~~~~~ie~Rr~~Le~yL~~l~~~p~l~~s~~~~~FL~~~~~~ 111 (115)
T 3lui_A 60 -----------------------PA---FPPKK-LFSLTPAEVEQRREQLEKYMQAVRQDPLLGSSETFNSFLRRAQQE 111 (115)
T ss_dssp -----------------------CC---CCCCC-SSCCCHHHHHHHHHHHHHHHHHHHHSHHHHHCHHHHHHHHHHHHH
T ss_pred -----------------------CC---CCCCc-ccCCCHHHHHHHHHHHHHHHHHHHcChhhhcChHHHHHHCcCHHh
Confidence 11 33211 111122233455679999999999999999999999999988753
No 22
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.63 E-value=2.5e-07 Score=85.59 Aligned_cols=95 Identities=20% Similarity=0.335 Sum_probs=72.8
Q ss_pred CcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCCeEEEEeCCCCCCccEEEEEeCCCCCCCCCCCcc
Q 002219 211 KLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGRV 290 (952)
Q Consensus 211 KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdSfL~yv~d~~~~~~~~v~l~D~~~~~~~~~~~~~ 290 (952)
--+||||.|+. + . ...|++|||||+++.|.|++++.+.++..++.++.... +
T Consensus 5 ~~~~G~L~K~g-----~-----------~----~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~~--------~ 56 (113)
T 1pls_A 5 RIREGYLVKKG-----S-----------V----FNTWKPMWVVLLEDGIEFYKKKSDNSPKGMIPLKGSTL--------T 56 (113)
T ss_dssp CSEEEEEEEES-----S-----------S----SSCCEEEEEEEETTEEEEESSTTCSSCSEEEESSSCCE--------E
T ss_pred CcEEEEEEEeC-----C-----------C----CCCceEEEEEEECCEEEEEeCCCCCCcceEEEcCCCEE--------E
Confidence 35899999872 1 0 14799999999999999999888888999887764211 1
Q ss_pred cccccccccCCcceeEEEEeCc-eEEEEEecchhhHHHHHHHHHhcc
Q 002219 291 SLATEVKERNPLRHAFKVTCGV-RSIRLRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 291 ~~~~~~~~~~~~~~~~~i~~~~-r~l~l~~~s~~~~~~w~~~i~~~~ 336 (952)
... .+.....+.|.|.... |.+.|.|.|...+.+|+.+|+.+.
T Consensus 57 ~~~---~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~ai~~~~ 100 (113)
T 1pls_A 57 SPC---QDFGKRMFVFKITTTKQQDHFFQAAFLEERDAWVRDINKAI 100 (113)
T ss_dssp SSC---CSSCCSSSEEEEEETTTEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred Eec---CCCCCCccEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHH
Confidence 000 1123346899998875 999999999999999999999865
No 23
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=98.62 E-value=1.2e-07 Score=86.13 Aligned_cols=102 Identities=23% Similarity=0.442 Sum_probs=74.7
Q ss_pred CCcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCCeEEEEeCCCCCCccEEEEEeCCCCCCCCCCCc
Q 002219 210 PKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGR 289 (952)
Q Consensus 210 ~KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdSfL~yv~d~~~~~~~~v~l~D~~~~~~~~~~~~ 289 (952)
.-.|||||.|+.... ..+ ...|++|||||+++.|.|++++.+..+..++.++.. .
T Consensus 2 ~v~~~G~L~K~~~~~-------------~~~---~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~---------~ 56 (108)
T 1u5d_A 2 SVIKQGYLEKKSKDH-------------SFF---GSEWQKRWCVVSRGLFYYYANEKSKQPKGTFLIKGY---------S 56 (108)
T ss_dssp CEEEEEEEEEEEECS-------------SSS---CEEEEEEEEEEETTEEEEESSTTCSSCSEEEECTTC---------E
T ss_pred CccEEEEEEEcCCCC-------------Ccc---ccCceeeEEEEeCCEEEEecCCCCCCCCEEEEecce---------E
Confidence 346999999984210 011 147999999999999999999888888888876531 1
Q ss_pred ccccccccccCCcceeEEEEeCc-eEEEEEecchhhHHHHHHHHHhcc
Q 002219 290 VSLATEVKERNPLRHAFKVTCGV-RSIRLRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~i~~~~-r~l~l~~~s~~~~~~w~~~i~~~~ 336 (952)
+.............+.|.|.... |.+.|.|.|...+.+|+.+|..+.
T Consensus 57 v~~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~ai~~~i 104 (108)
T 1u5d_A 57 VRMAPHLRRDSKKESCFELTSQDRRTYEFTATSPAEARDWVDQISFLL 104 (108)
T ss_dssp EEECGGGCSSGGGGGEEEEECSSSCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEeCCccccccCCcceEEEEcCCCcEEEEECCCHHHHHHHHHHHHHHH
Confidence 21111111223346899999887 999999999999999999998764
No 24
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}
Probab=98.57 E-value=1.8e-07 Score=83.85 Aligned_cols=88 Identities=17% Similarity=0.280 Sum_probs=65.2
Q ss_pred ceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCCeEEEEeCCCCCC--ccEEEEEeCCCCCCCCCCCcc
Q 002219 213 KEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTK--PMDIIVFDVLPASDGNGEGRV 290 (952)
Q Consensus 213 KEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdSfL~yv~d~~~~~--~~~v~l~D~~~~~~~~~~~~~ 290 (952)
|+|||.|+. +.+ ..|++|||||+++.|.|++++.+.. +..++-+.. ..+
T Consensus 3 k~G~L~K~g----------------~~~----k~WkkR~FvL~~~~L~Yy~~~~~~~~~~~~~i~l~~---------~~~ 53 (94)
T 2rsg_A 3 RCGVLSKWT----------------NYI----HGWQDRWVVLKNNALSYYKSEDETEYGCRGSICLSK---------AVI 53 (94)
T ss_dssp EEEEEEEES----------------SST----TCEEEEEEEEETTEEEEESSTTGGGTCCSEEEETTT---------CEE
T ss_pred EEEEEEEeC----------------CCC----CCceEEEEEEECCEEEEEEecccccccceeeEecce---------eee
Confidence 899999872 111 4799999999999999998765432 444432221 111
Q ss_pred cccccccccCCcceeEEEEeCceEEEEEecchhhHHHHHHHHHhc
Q 002219 291 SLATEVKERNPLRHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDA 335 (952)
Q Consensus 291 ~~~~~~~~~~~~~~~~~i~~~~r~l~l~~~s~~~~~~w~~~i~~~ 335 (952)
. ......+.|.|..++|.+.|.|.|...+.+|+.+|+++
T Consensus 54 ~------~~~~~~~~F~i~~~~r~~~l~A~s~~e~~~Wi~aLq~A 92 (94)
T 2rsg_A 54 T------PHDFDECRFDISVNDSVWYLRAQDPDHRQQWIDAIEQH 92 (94)
T ss_dssp E------ECSSCSSEEEEEETTEEEEEECCSSCCTHHHHHHHHHH
T ss_pred e------cCcccceeEEEEeCCeEEEEECCCHHHHHHHHHHHHhh
Confidence 1 12334678999999999999999999999999999875
No 25
>2ar5_A Phosphoinositide 3-kinase; PX domain, transferase; 1.80A {Homo sapiens} PDB: 2rea_A 2red_A
Probab=98.57 E-value=1.9e-07 Score=89.09 Aligned_cols=106 Identities=18% Similarity=0.321 Sum_probs=74.6
Q ss_pred eEEEeeeeecCCCCCCcceeEEEEEEEecce--EEEEEEehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCc
Q 002219 45 KASIVSVSRPDAGDISPMLLSYTIEVQYKQF--KWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEWLQNLGMGDHM 122 (952)
Q Consensus 45 ~v~I~~~er~~s~~~~~~~~~Y~Iel~~g~~--~W~v~r~~~~f~~Lh~~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (952)
.|.|++.+.-.... ...+|.|+++...- .|+|.|+|+||..||.+|+. ..|..
T Consensus 7 ~v~V~~~ek~~~~~---k~y~Y~I~v~~~~~~~~~~V~RRYseF~~Lh~~L~~-------------------~fp~~--- 61 (121)
T 2ar5_A 7 EVSVFTYHKKYNPD---KHYIYVVRILREGQIEPSFVFRTFDEFQELHNKLSI-------------------IFPLW--- 61 (121)
T ss_dssp EEEEEEEECCCSSS---SCCEEEEEEEETTCSSCEEEEEEHHHHHHHHHHHHH-------------------HSCGG---
T ss_pred EEEECcEEEEecCC---CcEEEEEEEEECCCceeEEEEEEHHHHHHHHHHHHH-------------------HCCCC---
Confidence 78999998533322 24569999999874 89999999999999999884 12210
Q ss_pred cccccCccccccccccccccccCCCCCCCCCCCCCCccccC--CCcchHHHHHHHHHHHHHHhc-cccccchhhhheeee
Q 002219 123 AVVQEDDEGDEIAVNHDESSKKRDVPANAALPVIRPALGRQ--HSMSDRAKVAMQQYLNHFLGN-MDIVNSREVCKFLEA 199 (952)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~lp~~~~~~~~~--~~~~~r~~~~LE~YL~~lL~~-~~~~n~~~l~~Flev 199 (952)
.+|. ||.- ..+++. ..+.++|+..||.||+.||.. +.++++..+..||+-
T Consensus 62 -----------------------~lP~---lP~K-~~~g~~~~~~~~e~Rr~~Le~yL~~ll~~p~~i~~s~~v~~Ff~~ 114 (121)
T 2ar5_A 62 -----------------------KLPG---FPNR-MVLGRTHIKDVAAKRKIELNSYLQSLMNASTDVAECDLVCTFFHG 114 (121)
T ss_dssp -----------------------GSCC---CCCC-CCSSSSSTTHHHHHHHHHHHHHHHHHHTSCHHHHTSHHHHHHTSS
T ss_pred -----------------------CCCC---CCCC-eecCccCcHHHHHHHHHHHHHHHHHHHhCCchhcCCHHHHHHcCC
Confidence 1111 3321 112221 235556678999999999986 567899999999998
Q ss_pred ccC
Q 002219 200 SKL 202 (952)
Q Consensus 200 S~~ 202 (952)
|..
T Consensus 115 ~~~ 117 (121)
T 2ar5_A 115 SHH 117 (121)
T ss_dssp SCC
T ss_pred ccc
Confidence 864
No 26
>2l73_A NADPH oxidase organizer 1; cell membrane, PX domain, oxidoreductase regulator; NMR {Homo sapiens}
Probab=98.54 E-value=1.7e-07 Score=92.82 Aligned_cols=122 Identities=16% Similarity=0.192 Sum_probs=82.2
Q ss_pred CeEEEeeeee-cCCCCCCcceeEEEEEEEec-ceEEEEEEehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 002219 44 PKASIVSVSR-PDAGDISPMLLSYTIEVQYK-QFKWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEWLQNLGMGDH 121 (952)
Q Consensus 44 p~v~I~~~er-~~s~~~~~~~~~Y~Iel~~g-~~~W~v~r~~~~f~~Lh~~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (952)
+.|.|++.+. ....+ .+++|.|+++.- .-.|+|.|+|+||..||.+|+. .+|...
T Consensus 9 ~~v~v~~~ek~~~~~~---~y~~Y~I~V~~~d~~~~~V~RRYseF~~Lh~~L~~-------------------~FP~e~- 65 (149)
T 2l73_A 9 PRYPVSVQGAALVQIK---RLQTFAFSVRWSDGSDTFVRRSWDEFRQLKKTLKE-------------------TFPVEA- 65 (149)
T ss_dssp CCCEEEEEEEEEECCS---SSCEEEEEEEETTSCEEEEEEEHHHHHHHHHHHHH-------------------HCGGGG-
T ss_pred eEEEEEeeeEeecCCC---ceEEEEEEEEEeCCCEEEEEEehHHHHHHHHHHHH-------------------HCchhh-
Confidence 6788888883 33222 366799999954 4579999999999999999883 222100
Q ss_pred ccccccCccccccccccccccccCCCCCCCCCCCCCCcccc--CCCcchHHHHHHHHHHHHHHhccc-cccchhhhheee
Q 002219 122 MAVVQEDDEGDEIAVNHDESSKKRDVPANAALPVIRPALGR--QHSMSDRAKVAMQQYLNHFLGNMD-IVNSREVCKFLE 198 (952)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~lp~~~~~~~~--~~~~~~r~~~~LE~YL~~lL~~~~-~~n~~~l~~Fle 198 (952)
......++.+|. ||.-+ .+++ ...+...|+..||.||+.||..+. ++++..+..||+
T Consensus 66 ----------------~~~~~~~r~lP~---lP~k~-~~~~~~~~~~~e~R~~~Le~YL~~Ll~lp~~i~~s~~v~~Ff~ 125 (149)
T 2l73_A 66 ----------------GLLRRSDRVLPK---LLDAP-LLGRVGRTSRGLARLQLLETYSRRLLATAERVARSPTITGFFA 125 (149)
T ss_dssp ----------------SSSCSSCCSSCC---CCCCS-CCSSCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHSHHHHHHHS
T ss_pred ----------------cccccccccccC---CCCCe-eeccccchHHHHHHHHHHHHHHHHHHhCCccccCCHHHHHHhC
Confidence 000113455666 55321 1221 123455667899999999998765 789999999999
Q ss_pred eccCCCCCCC
Q 002219 199 ASKLSFSPEY 208 (952)
Q Consensus 199 vS~~sf~~~~ 208 (952)
.+.--+.+++
T Consensus 126 ~~~~D~~~~~ 135 (149)
T 2l73_A 126 PQPLDLEPAL 135 (149)
T ss_dssp CCGGGGSSSC
T ss_pred CCccccCccC
Confidence 9987655443
No 27
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.54 E-value=5.8e-07 Score=83.20 Aligned_cols=98 Identities=21% Similarity=0.376 Sum_probs=72.9
Q ss_pred CCcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCCeEEEEeCCCCCCccEEEEEeCCCCCCCCCCCc
Q 002219 210 PKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGR 289 (952)
Q Consensus 210 ~KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdSfL~yv~d~~~~~~~~v~l~D~~~~~~~~~~~~ 289 (952)
.--+||||.|+... . ...|++|||||+++.|.|++++.+.++..++.++.. .
T Consensus 10 ~~~~~G~L~K~~~~---------------~----~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~---------~ 61 (117)
T 2d9y_A 10 PVTKAGWLFKQASS---------------G----VKQWNKRWFVLVDRCLFYYKDEKEESILGSIPLLSF---------R 61 (117)
T ss_dssp CCCEEEEEEEECTT---------------S----SSCEEEEEEEEETTEEEEESSTTCCSCCEEEECSSC---------E
T ss_pred CeeEEEEEEEeCCC---------------C----CCCceEEEEEECCCEEEEECCCCCCCcCCEEEeCCe---------E
Confidence 34699999987310 0 157999999999999999998888888888876631 1
Q ss_pred ccccccccccCCcceeEEEEe-CceEEEEEecchhhHHHHHHHHHhcc
Q 002219 290 VSLATEVKERNPLRHAFKVTC-GVRSIRLRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~i~~-~~r~l~l~~~s~~~~~~w~~~i~~~~ 336 (952)
+.... ..+.....+.|.|.. ..|.+.|.|.+...+.+|+.+|..+.
T Consensus 62 v~~~~-~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~~~ 108 (117)
T 2d9y_A 62 VAAVQ-PSDNISRKHTFKAEHAGVRTYFFSAESPEEQEAWIQAMGEAA 108 (117)
T ss_dssp EEECC-TTTTCCCSSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHTT
T ss_pred EEEcC-ccccCCCccEEEEEcCCCcEEEEEcCCHHHHHHHHHHHHHHH
Confidence 11000 011234468999964 56999999999999999999999976
No 28
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.53 E-value=4.9e-07 Score=83.45 Aligned_cols=97 Identities=23% Similarity=0.380 Sum_probs=74.4
Q ss_pred CCCcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCCeEEEEeCCCCCCccEEEEEeCCCCCCCCCCC
Q 002219 209 GPKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEG 288 (952)
Q Consensus 209 G~KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdSfL~yv~d~~~~~~~~v~l~D~~~~~~~~~~~ 288 (952)
+.--|||||.|+.. . ...|++|||||+++.|.|++++.+.++..++.++.. .
T Consensus 6 ~~~~~~G~L~K~~~----------------~----~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~--------~ 57 (115)
T 2dn6_A 6 SGVLKQGYMMKKGH----------------R----RKNWTERWFVLKPNIISYYVSEDLKDKKGDILLDEN--------C 57 (115)
T ss_dssp CSCSEEEEEEEECT----------------T----SSCEEEEEEEECSSCEEEESSTTCSSEEEEECCCTT--------C
T ss_pred CCceEEEEEEecCC----------------C----CCCcEEeEEEEECCEEEEeCCCCCcccCcEEEecCc--------E
Confidence 34569999998731 0 147999999999999999998888888888766531 1
Q ss_pred cccccccccccCCcceeEEEEeCceEEEEEecchhhHHHHHHHHHhcc
Q 002219 289 RVSLATEVKERNPLRHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~i~~~~r~l~l~~~s~~~~~~w~~~i~~~~ 336 (952)
.+... .+.....+.|.|....|.+.|.|.+...+.+|+.+|..+.
T Consensus 58 ~v~~~---~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~ai~~~~ 102 (115)
T 2dn6_A 58 CVESL---PDKDGKKCLFLVKCFDKTFEISASDKKKKQEWIQAIHSTI 102 (115)
T ss_dssp EEEEE---CCCTTCCSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEEEC---CCCCCCeeEEEEEeCCCEEEEEcCCHHHHHHHHHHHHHHH
Confidence 22211 1123346899999999999999999999999999998865
No 29
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=98.53 E-value=5.9e-07 Score=83.16 Aligned_cols=105 Identities=16% Similarity=0.201 Sum_probs=74.9
Q ss_pred CCCcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEe--CCeEEEEeCCCCCCccEEEEEeCCCCCCCCC
Q 002219 209 GPKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLK--PGFLALLADPFDTKPMDIIVFDVLPASDGNG 286 (952)
Q Consensus 209 G~KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVK--dSfL~yv~d~~~~~~~~v~l~D~~~~~~~~~ 286 (952)
+..-+||||.|+. + . ...|++|||||+ +..|.|++++.+.++..+|.++.........
T Consensus 6 ~~~~~~G~L~K~g-----~----------~-----~~~Wk~R~fvL~~~~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~ 65 (117)
T 1v5u_A 6 SGRSYEGILYKKG-----A----------F-----MKPWKARWFVLDKTKHQLRYYDHRMDTECKGVIDLAEVEAVAPGT 65 (117)
T ss_dssp CSSSEEEEEEECC-----C----------S-----SSCCEEEEEEEETTTTEEEEESSSSCSSCCCEEEGGGEEEEECCC
T ss_pred CCccEEEEEEecC-----C----------C-----CCCceeeEEEEECCCCEEEEeecCCCCccceEEEccCcEEEeecC
Confidence 4457999999872 1 0 157999999999 8899999988888888877665321110000
Q ss_pred CCcccccccccccCCcceeEEEEeCceEEEEEecchhhHHHHHHHHHhccCC
Q 002219 287 EGRVSLATEVKERNPLRHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDAGLR 338 (952)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~i~~~~r~l~l~~~s~~~~~~w~~~i~~~~~~ 338 (952)
. .. +. .......+.|.|....|.+.|.|.+...+.+|+.+|..+...
T Consensus 66 ~-~~--~~--~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~ 112 (117)
T 1v5u_A 66 P-TI--GA--PKTVDEKAFFDVKTTRRVYNFCAQDVPSAQQWVDRIQSCLSS 112 (117)
T ss_dssp C-CT--TS--CSSSCTTTCEEEEESSCEEEEECSSHHHHHHHHHHHHTTCCC
T ss_pred c-cc--cc--cccCCCCeEEEEECCCceEEEECCCHHHHHHHHHHHHHHhcc
Confidence 0 00 00 011234588999999999999999999999999999997643
No 30
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=98.53 E-value=4.1e-07 Score=85.12 Aligned_cols=98 Identities=15% Similarity=0.224 Sum_probs=73.1
Q ss_pred CcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCCeEEEEeCCCCCCccEEEEEeCCCCCCCCCCCcc
Q 002219 211 KLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGRV 290 (952)
Q Consensus 211 KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdSfL~yv~d~~~~~~~~v~l~D~~~~~~~~~~~~~ 290 (952)
-.+||||.|+... .+ ..|++|||||+++.|.|++++.+.++..+|.+.. ..+
T Consensus 11 ~~~~G~L~K~~~~---------------~~----~~WkkR~fvL~~~~L~yy~~~~~~~~~g~i~l~~---------~~v 62 (123)
T 1upq_A 11 VHIRGWLHKQDSS---------------GL----RLWKRRWFVLSGHCLFYYKDSREESVLGSVLLPS---------YNI 62 (123)
T ss_dssp EEEEEEEEEECSS---------------SS----CCEEEEEEEEETTEEEEESSTTCCSCCEEEEGGG---------CEE
T ss_pred ceEEEEEEeeCCC---------------CC----CCceeEEEEEeCCEEEEECCCCCcccceEEECCC---------CEE
Confidence 3599999987310 01 4699999999999999999888888888876543 122
Q ss_pred cccccccccCCcceeEEEEeCc-eEEEEEecchhhHHHHHHHHHhccC
Q 002219 291 SLATEVKERNPLRHAFKVTCGV-RSIRLRTRTGAKVRDWVAAINDAGL 337 (952)
Q Consensus 291 ~~~~~~~~~~~~~~~~~i~~~~-r~l~l~~~s~~~~~~w~~~i~~~~~ 337 (952)
..... .......+.|.|...+ |.+.|.|.|...+..|+.+|..+..
T Consensus 63 ~~~~~-~~~~~~~~~f~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~ 109 (123)
T 1upq_A 63 RPDGP-GAPRGRRFTFTAEHPGMRTYVLAADTLEDLRGWLRALGRASR 109 (123)
T ss_dssp EECCS-SCTTSSSSEEEEECTTSCCEEEECSSHHHHHHHHHHHHHHHC
T ss_pred EECCC-CccCCCcEEEEEECCCCeEEEEECCCHHHHHHHHHHHHHHHh
Confidence 21110 0122356889998765 9999999999999999999999864
No 31
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.53 E-value=4.3e-07 Score=84.87 Aligned_cols=98 Identities=21% Similarity=0.376 Sum_probs=72.9
Q ss_pred CCcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCCeEEEEeCCCCCCccEEEEEeCCCCCCCCCCCc
Q 002219 210 PKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGR 289 (952)
Q Consensus 210 ~KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdSfL~yv~d~~~~~~~~v~l~D~~~~~~~~~~~~ 289 (952)
.--|||||.|+... . ...|++|||||+++.|.|++++.+..+..++.++.. .
T Consensus 21 ~~~~~G~L~K~~~~---------------~----~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~---------~ 72 (122)
T 2yry_A 21 PVTKAGWLFKQASS---------------G----VKQWNKRWFVLVDRCLFYYKDEKEESILGSIPLLSF---------R 72 (122)
T ss_dssp CEEEEEEEEEECCS---------------S----SCCEEEEEEEEETTEEEEESSTTCCSCCEEEESTTC---------C
T ss_pred CccEEEEEEEECCC---------------C----CCCcEEEEEEEeCCEEEEECCCCCCCcccEEEcCCC---------E
Confidence 34699999987310 0 157999999999999999998888889988876631 1
Q ss_pred ccccccccccCCcceeEEEEe-CceEEEEEecchhhHHHHHHHHHhcc
Q 002219 290 VSLATEVKERNPLRHAFKVTC-GVRSIRLRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~i~~-~~r~l~l~~~s~~~~~~w~~~i~~~~ 336 (952)
+.... ..+.....+.|.|.. ..|.+.|.|.+...+.+|+.+|..+.
T Consensus 73 v~~~~-~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~ 119 (122)
T 2yry_A 73 VAAVQ-PSDNISRKHTFKAEHAGVRTYFFSAESPEEQEAWIQAMGEAA 119 (122)
T ss_dssp CEECC-TTCSCSSSSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEEcC-ccccCCcccEEEEecCCCcEEEEEcCCHHHHHHHHHHHHHHH
Confidence 11000 011234468999964 57999999999999999999999875
No 32
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=98.52 E-value=5e-07 Score=87.98 Aligned_cols=105 Identities=13% Similarity=0.241 Sum_probs=76.4
Q ss_pred CCCCcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCCeEEEEeCCCCCCccEEEEEeCCCCCCCCCC
Q 002219 208 YGPKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGE 287 (952)
Q Consensus 208 ~G~KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdSfL~yv~d~~~~~~~~v~l~D~~~~~~~~~~ 287 (952)
++.--|+|||.|+... . +. ....|++|||||+++.|.|++++.+..+..+|.++..
T Consensus 14 ~~~~~~~G~L~K~g~~------~-------~~---~~k~WkkR~fvL~~~~L~yyk~~~~~~~~g~i~L~~~-------- 69 (148)
T 1u5f_A 14 LPFVIKAGYLEKRRKD------H-------SF---LGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGY-------- 69 (148)
T ss_dssp CSSEEEEEEEEEECCC------S-------SC---SSCSEEEEEEEEETTEEEEESSTTCSSCSEEEECTTC--------
T ss_pred CCCccEEEEEEEeCCC------C-------CC---cCCCceeEEEEEECCEEEEEcCCCCcccceEEEcCCc--------
Confidence 4556799999988310 0 00 1157999999999999999999888888888877531
Q ss_pred CcccccccccccCCcceeEEEEeCc-eEEEEEecchhhHHHHHHHHHhccC
Q 002219 288 GRVSLATEVKERNPLRHAFKVTCGV-RSIRLRTRTGAKVRDWVAAINDAGL 337 (952)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~i~~~~-r~l~l~~~s~~~~~~w~~~i~~~~~ 337 (952)
.+.............+.|.|.... |.+.|.|.+...+.+|+.+|..+..
T Consensus 70 -~v~~~~~~~~~~~~~~~F~I~~~~~r~~~l~a~s~~e~~~Wi~al~~~i~ 119 (148)
T 1u5f_A 70 -DVRMNNTLRKDGKKDCCFEICAPDKRIYQFTAASPKDAEEWVQQLKFILQ 119 (148)
T ss_dssp -EEEECTTSCSSTTGGGEEEEECTTSCEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred -EEEECCCcccCCCCccEEEEECCCCcEEEEECCCHHHHHHHHHHHHHHHH
Confidence 121111001122345899999876 9999999999999999999999763
No 33
>2i4k_A Sorting nexin-1, SNX1; 3-stranded beta sheet, 3 alpha helices, proline rich loop, protein transport; NMR {Homo sapiens}
Probab=98.52 E-value=2.3e-08 Score=95.70 Aligned_cols=113 Identities=14% Similarity=0.273 Sum_probs=71.2
Q ss_pred eEEEeeeeecCCCCCCcceeEEEEEEEec-----ceEEEEEEehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 002219 45 KASIVSVSRPDAGDISPMLLSYTIEVQYK-----QFKWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEWLQNLGMG 119 (952)
Q Consensus 45 ~v~I~~~er~~s~~~~~~~~~Y~Iel~~g-----~~~W~v~r~~~~f~~Lh~~lk~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (952)
+|+|++.++...+. ..+++|+|+++.. .-.|+|.|||+||..||.+|+. ..|..
T Consensus 5 ~v~V~~~~~~~~g~--~~~~~Y~I~v~~~~~~~~~~~~~V~RRYsdF~~L~~~L~~-------------------~~~~~ 63 (128)
T 2i4k_A 5 TVGITDPEKIGDGM--NAYVAYKVTTQTSLPLFRSKQFAVKRRFSDFLGLYEKLSE-------------------KHSQN 63 (128)
T ss_dssp CCCBCCCCBCCCSS--CCCBCCCBCCCCCSSSSCSSCCCBCCCHHHHHHHHHHHHH-------------------TCSSS
T ss_pred EEEECCceEecCCC--cCEEEEEEEEEEcCCCCCCCeEEEEeEhHHHHHHHHHHHH-------------------hCCCC
Confidence 35666666544432 2478999999863 6799999999999999998884 11100
Q ss_pred -CCccccccCccccccccccccccccCCCCCCCCCCCCCCccc----cCCCcchHHHHHHHHHHHHHHhccccccchhhh
Q 002219 120 -DHMAVVQEDDEGDEIAVNHDESSKKRDVPANAALPVIRPALG----RQHSMSDRAKVAMQQYLNHFLGNMDIVNSREVC 194 (952)
Q Consensus 120 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~lp~~~~~~~----~~~~~~~r~~~~LE~YL~~lL~~~~~~n~~~l~ 194 (952)
...|.+ |....+...+-.++ .....-+.||.+||.||+.++..+.++++..+.
T Consensus 64 ~~~iP~l----------------------P~K~~~~~~~~~~~~~~~~~~~~ie~Rr~~Le~fL~~l~~~p~l~~s~~~~ 121 (128)
T 2i4k_A 64 GFIVPPP----------------------PEKSLIGMTKVKVGKEDSSSAEFLEKRRAALERYLQRIVNHPTMLQDPDVR 121 (128)
T ss_dssp SCCCCSS----------------------SSCCSSSSSSCCCCSCCCSSTTHHHHHHHHHHHHHHHHHHCHHHHCSHHHH
T ss_pred CcCcCCC----------------------CCCcccchhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCcccccChHHH
Confidence 000000 00000000000000 022333455679999999999999999999999
Q ss_pred heeeec
Q 002219 195 KFLEAS 200 (952)
Q Consensus 195 ~FlevS 200 (952)
+||+.+
T Consensus 122 ~FL~~~ 127 (128)
T 2i4k_A 122 EFLEKE 127 (128)
T ss_dssp TTTTCC
T ss_pred HhhCCC
Confidence 999875
No 34
>2iwl_X Phosphatidylinositol-4-phosphate 3-kinase C2 domain-containing alpha polypeptide; PI3K, PX domain, transferase; 2.6A {Homo sapiens}
Probab=98.52 E-value=2.5e-07 Score=90.52 Aligned_cols=107 Identities=17% Similarity=0.290 Sum_probs=73.0
Q ss_pred eEEEeeeeecCCCCCCcceeEEEEEEEecce--EEEEEEehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCc
Q 002219 45 KASIVSVSRPDAGDISPMLLSYTIEVQYKQF--KWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEWLQNLGMGDHM 122 (952)
Q Consensus 45 ~v~I~~~er~~s~~~~~~~~~Y~Iel~~g~~--~W~v~r~~~~f~~Lh~~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (952)
+|.|++++.....+ .+.+|.|+++...- .|.|.|+|+||..||.+|+. .+|..
T Consensus 22 ~v~I~~~ek~~~~~---k~~~Y~I~V~~~~~~~~~~V~RRYseF~~Lh~~L~~-------------------~fp~~--- 76 (140)
T 2iwl_X 22 EVSVFTYHKKYNPD---KHYIYVVRILREGQIEPSFVFRTFDEFQELHNKLSI-------------------IFPLW--- 76 (140)
T ss_dssp EEEEEEEEECCSSS---SCEEEEEEEEETTCSSCEEEEECHHHHHHHHHHHHH-------------------HSCGG---
T ss_pred EEEECcEEEEecCC---CeEEEEEEEEECCCceeEEEEeEHHHHHHHHHHHHH-------------------HCcCc---
Confidence 78999998544332 25679999999875 89999999999999999884 12210
Q ss_pred cccccCccccccccccccccccCCCCCCCCCCCCCCcccc--CCCcchHHHHHHHHHHHHHHhc-cccccchhhhheeee
Q 002219 123 AVVQEDDEGDEIAVNHDESSKKRDVPANAALPVIRPALGR--QHSMSDRAKVAMQQYLNHFLGN-MDIVNSREVCKFLEA 199 (952)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~lp~~~~~~~~--~~~~~~r~~~~LE~YL~~lL~~-~~~~n~~~l~~Flev 199 (952)
.+|. ||.- ..+++ ...+...|+..||.||+.||.. +.+.++..+.+||+.
T Consensus 77 -----------------------~lP~---lP~K-~~~~~~~~~~~~e~Rr~~Le~yL~~Ll~~~~~i~~s~~v~~Fl~~ 129 (140)
T 2iwl_X 77 -----------------------KLPG---FPNR-MVLGRTHIKDVAAKRKIELNSYLQSLMNASTDVAECDLVCTFFHP 129 (140)
T ss_dssp -----------------------GSCC---CCC-----------CCCCHHHHHHHHHHHHHTTSCHHHHTSHHHHHHHSC
T ss_pred -----------------------cCCC---CCCC-eecCccchHHHHHHHHHHHHHHHHHHHhCCHhhhcCHHHHHHhCC
Confidence 0111 3321 11221 1234445567999999999974 567899999999998
Q ss_pred ccCC
Q 002219 200 SKLS 203 (952)
Q Consensus 200 S~~s 203 (952)
++.-
T Consensus 130 ~~~D 133 (140)
T 2iwl_X 130 LLRD 133 (140)
T ss_dssp CTTT
T ss_pred CCCC
Confidence 7654
No 35
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=98.51 E-value=1.3e-06 Score=80.34 Aligned_cols=97 Identities=15% Similarity=0.319 Sum_probs=72.5
Q ss_pred CCCcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCCeEEEEeCCCCCCccEEEEEeCCCCCCCCCCC
Q 002219 209 GPKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEG 288 (952)
Q Consensus 209 G~KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdSfL~yv~d~~~~~~~~v~l~D~~~~~~~~~~~ 288 (952)
+...+||||.|+. + . ...|++|||||+++.|.|++++.+.++..++.+...
T Consensus 6 ~~~~~~G~L~K~~-----~----------~-----~~~Wk~RwfvL~~~~L~yyk~~~~~~~~~~i~L~~~--------- 56 (109)
T 1wgq_A 6 SGSTMSGYLYRSK-----G----------S-----KKPWKHLWFVIKNKVLYTYAASEDVAALESQPLLGF--------- 56 (109)
T ss_dssp CSCSCEEEEEEES-----S----------T-----TSCCEEEEEEEETTEEEEESCTTCSSCSEEEECSSE---------
T ss_pred CCCeEEEEEEeCC-----C----------C-----CCCceeEEEEEeCCEEEEECCCCcCccCceEECCCC---------
Confidence 4457999999872 1 0 157999999999999999999888888888766531
Q ss_pred cccccccccccCCcceeEEEEeC-ceEEEEEecchhhHHHHHHHHHhccC
Q 002219 289 RVSLATEVKERNPLRHAFKVTCG-VRSIRLRTRTGAKVRDWVAAINDAGL 337 (952)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~i~~~-~r~l~l~~~s~~~~~~w~~~i~~~~~ 337 (952)
.+... .+.....+.|.|... .|.+.|.|.+...+..|+.+|..+..
T Consensus 57 ~~~~~---~~~~~~~~~F~i~~~~~~~~~~~a~s~~e~~~Wi~al~~a~~ 103 (109)
T 1wgq_A 57 TVTLV---KDENSESKVFQLLHKGMVFYVFKADDAHSTQRWIDAFQEGTV 103 (109)
T ss_dssp EEEEC---CCSSCSSSEEEEEETTEEEEEEECSSHHHHHHHHHHHHHHHS
T ss_pred EEEEC---CCCCCCCcEEEEEeCCCeEEEEECCCHHHHHHHHHHHHHHhc
Confidence 11111 011223589999866 46799999999999999999999763
No 36
>2v14_A Kinesin-like motor protein C20ORF23; plus-END kinesin complex, transport protein, phosphatidylinositol 3-phosphate binding, nucleotide-binding; 2.20A {Homo sapiens}
Probab=98.50 E-value=4.8e-07 Score=87.88 Aligned_cols=49 Identities=18% Similarity=0.272 Sum_probs=41.8
Q ss_pred eEEEeeeeecCCCCCCcceeEEEEEEEecceEEEEEEehhhHHHHHHHHHH
Q 002219 45 KASIVSVSRPDAGDISPMLLSYTIEVQYKQFKWKLVKKASQVFYLHFALKR 95 (952)
Q Consensus 45 ~v~I~~~er~~s~~~~~~~~~Y~Iel~~g~~~W~v~r~~~~f~~Lh~~lk~ 95 (952)
+|+|++++....+. ..+++|.|+++.+.-.|+|.|||+||..||.+|+.
T Consensus 7 ~VsIp~~~~~~~~~--~~~~~Y~I~v~~~~~~~~V~RRYsdF~~L~~~L~~ 55 (134)
T 2v14_A 7 KISIPRYVLCGQGK--DAHFEFEVKITVLDETWTVFRRYSRFREMHKTLKL 55 (134)
T ss_dssp EEEEEEEEEESSTT--SCEEEEEEEEEETTEEEEEEECHHHHHHHHHHHHH
T ss_pred EEEECcEEEEecCC--CCEEEEEEEEEECCeEEEEEeeHHHHHHHHHHHHH
Confidence 79999998544332 24899999999999999999999999999999884
No 37
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.50 E-value=4.3e-07 Score=84.70 Aligned_cols=91 Identities=14% Similarity=0.343 Sum_probs=68.0
Q ss_pred CcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCCeEEEEeCCCCCCccEEEEEeCCCCCCCCCCCcc
Q 002219 211 KLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGRV 290 (952)
Q Consensus 211 KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdSfL~yv~d~~~~~~~~v~l~D~~~~~~~~~~~~~ 290 (952)
--|||||.|+.. + + ...|++|||||+++.|.|+++..+..+..++|.+. .+
T Consensus 10 ~~~~G~L~K~~~----~------------~---~k~WkkR~fvL~~~~L~yyk~~~~~~~~~i~l~~~----------~v 60 (114)
T 2da0_A 10 SEKKGYLLKKSD----G------------I---RKVWQRRKCSVKNGILTISHATSNRQPAKLNLLTC----------QV 60 (114)
T ss_dssp SCEEEEEEEECS----S------------S---CCCEEEEEEEEETTEEEECCSSCCSCCEEEETTTS----------EE
T ss_pred ccEEEEEEEeCC----C------------C---CCCceeEEEEEeCCEEEEEcCCCCCCCCEEEeeee----------EE
Confidence 359999999831 0 0 15799999999999999999866555554444321 12
Q ss_pred cccccccccCCcceeEEEEeCceEEEEEecchhhHHHHHHHHHhcc
Q 002219 291 SLATEVKERNPLRHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 291 ~~~~~~~~~~~~~~~~~i~~~~r~l~l~~~s~~~~~~w~~~i~~~~ 336 (952)
. .....++.|.|....|.+.|.|.|...+.+|+.+|..+.
T Consensus 61 ~------~~~~~~~~F~I~~~~r~~~l~a~s~~e~~~Wi~al~~~~ 100 (114)
T 2da0_A 61 K------PNAEDKKSFDLISHNRTYHFQAEDEQDYVAWISVLTNSK 100 (114)
T ss_dssp E------ECSSSSSCEEEEETTEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred E------ECCCCCCEEEEEcCCcEEEEEcCCHHHHHHHHHHHHHHH
Confidence 1 112345789999999999999999999999999998764
No 38
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.50 E-value=5.6e-07 Score=83.15 Aligned_cols=98 Identities=21% Similarity=0.357 Sum_probs=73.9
Q ss_pred CCCCcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCCeEEEEeCCCCCCccEEEEEeCCCCCCCCCC
Q 002219 208 YGPKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGE 287 (952)
Q Consensus 208 ~G~KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdSfL~yv~d~~~~~~~~v~l~D~~~~~~~~~~ 287 (952)
++.--|||||.|+. + . ...|++|||||+++.|.|++++.+..+..+|.++..
T Consensus 5 ~~~~~~~G~L~K~g-----~-----------~----~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~-------- 56 (118)
T 1v89_A 5 SSGPIKMGWLKKQR-----S-----------I----VKNWQQRYFVLRAQQLYYYKDEEDTKPQGCMYLPGC-------- 56 (118)
T ss_dssp SSCEEEEEEEEEEC-----S-----------S----SSCEEEEEEEEETTEEEEESSSSCCSCSEEECSTTE--------
T ss_pred CCCCcEEEEEEecC-----C-----------C----CCCccEEEEEEECCEEEEEeCCCCCCceEEEECCCC--------
Confidence 45567999999872 1 0 147999999999999999998888888888765421
Q ss_pred Cccc-ccccccccCCcceeEEEEe--------CceEEEEEecchhhHHHHHHHHHhcc
Q 002219 288 GRVS-LATEVKERNPLRHAFKVTC--------GVRSIRLRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 288 ~~~~-~~~~~~~~~~~~~~~~i~~--------~~r~l~l~~~s~~~~~~w~~~i~~~~ 336 (952)
.+. +.. .......+.|.|.. ..|.+.|.|.+...+.+|+.+|..+.
T Consensus 57 -~v~~~~~--~~~~~~~~~f~i~~~~~~~~~~~~~~~~l~a~s~~e~~~Wi~al~~~~ 111 (118)
T 1v89_A 57 -TIKEIAT--NPEEAGKFVFEIIPASWDQNRMGQDSYVLMASSQAEMEEWVKFLRRVA 111 (118)
T ss_dssp -EEEEECC--CSSCCCCCEEEEEESCCSSCCSSCCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred -EEEEcCc--CcccCCcceEEEECCccccccCCCcEEEEECCCHHHHHHHHHHHHHHH
Confidence 111 110 01223468999987 78999999999999999999999876
No 39
>2o8r_A Polyphosphate kinase; structural genomics, protein structure initiative, PSI, nysgrc, NEW YORK structural genomics research consortium; HET: MSE; 2.70A {Porphyromonas gingivalis} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4
Probab=98.49 E-value=4e-07 Score=109.43 Aligned_cols=126 Identities=17% Similarity=0.182 Sum_probs=92.5
Q ss_pred HHHHHHHHHhccC-----eEEEEeeeeccCCCCChhHHHHHHHHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCCCCCc
Q 002219 766 HCAYCSLIEKAEH-----FIYIENQFFISGLSGDEIIRNRVLESLYRRILRAYNEKKCFRVIIVIPLLPGFQGGVDDGGA 840 (952)
Q Consensus 766 ~~ayl~~I~~A~~-----~IYIEnqyFis~~~~~~~v~n~I~~AL~~RI~~A~~~g~~vrV~IvlPl~pgf~g~~~d~~~ 840 (952)
+.+++++|++|++ .|.|+ .|.++.. ..|.+||. +|+++|+.|+ |++.+...|.- .+
T Consensus 354 f~~vi~~I~~A~~DP~V~sIk~t-lYr~~~d-------s~Iv~ALi----~AA~rGv~V~--vLvel~arfde-----e~ 414 (705)
T 2o8r_A 354 YDYVVRLLMEAAISPDVSEIRLT-QYRVAEN-------SSIISALE----AAAQSGKKVS--VFVELKARFDE-----EN 414 (705)
T ss_dssp SHHHHHHHHHHHTCTTEEEEEEE-ESCCCSC-------CHHHHHHH----HHHHTTCEEE--EEECCCSCC---------
T ss_pred HHHHHHHHHHhccCCCceEEEEE-EEEEcCC-------HHHHHHHH----HHHHCCCEEE--EEEeCCCCcch-----hh
Confidence 4678999999999 99975 4555432 27999997 9999995554 45665544321 11
Q ss_pred hhHHHHHHHHHHHHHhhHHHHHHHHHHhcCCCcccccccccccccccccCCCCcccccceeeeeEEEEeCc---------
Q 002219 841 ASVRAIMHWQYRTICRGQNSILHNLYALLGPKTHDYISFYGLRAYGRLFEDGPVATSQVYVHSKVMIIDDS--------- 911 (952)
Q Consensus 841 ~~~r~i~~~qy~ti~rg~~si~~~L~~~~Gv~~~~Yi~f~~lr~~~~~~~~g~~~te~iyvHSKlmIVDD~--------- 911 (952)
......+|.+ +|+.+. |++. ...+|+|++|||++
T Consensus 415 -----------------ni~wa~~Le~-aGv~Vv-----~g~~--------------~lk~H~Ki~lIdrr~~~~g~~~~ 457 (705)
T 2o8r_A 415 -----------------NLRLSERMRR-SGIRIV-----YSMP--------------GLKVHAKTALILYHTPAGERPQG 457 (705)
T ss_dssp -----------------CHHHHHHHHH-HTCEEE-----ECCT--------------TCCBCCCEEEEEECCCSSSCCCE
T ss_pred -----------------hHHHHHHHHH-CCCEEE-----EccC--------------CCCceeEEEEEecccccCCceeE
Confidence 1124567887 798752 2221 24699999999988
Q ss_pred EEEEecccCCcCccCCCCCcceEEEEEchhhHHHhhhc
Q 002219 912 IALIGSANINDRSLLGSRDSEVSVGLYLFILRWELTDL 949 (952)
Q Consensus 912 ~~iIGSANin~RSm~G~rDsEi~v~i~d~~~~~~~~~~ 949 (952)
++.+|+.|+|+.+. ..-+++++.+.++.++.+|..+
T Consensus 458 y~~igtGN~n~~ta--riy~D~~l~t~~~~i~~dl~~v 493 (705)
T 2o8r_A 458 IALLSTGNFNETTA--RIYSDTTLMTANTDIVHDVYRL 493 (705)
T ss_dssp EEEEESSCSSCCCS--SCEEEEEEEECCHHHHHHHHHH
T ss_pred EEeccccceeeeEE--EEEeeeeeeecChHHHHHHHHH
Confidence 68889999999999 7789999999999999988764
No 40
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.49 E-value=4.7e-07 Score=84.09 Aligned_cols=92 Identities=16% Similarity=0.251 Sum_probs=71.0
Q ss_pred CCcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCCeEEEEeCCCCCCccEEEEEeCCCCCCCCCCCc
Q 002219 210 PKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGR 289 (952)
Q Consensus 210 ~KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdSfL~yv~d~~~~~~~~v~l~D~~~~~~~~~~~~ 289 (952)
.-.+||||.|+... . ...|++|||||+++.|.|++++.+.++..+|-++.. ..
T Consensus 7 ~~~~~G~L~K~~~~---------------~----~~~WkkR~fvL~~~~L~yy~~~~~~~~~g~i~l~~~--------~~ 59 (115)
T 2cod_A 7 GKVKSGWLDKLSPQ---------------G----KRMFQKRWVKFDGLSISYYNNEKEMYSKGIIPLSAI--------ST 59 (115)
T ss_dssp CCCEEEEEEECCSS---------------S----SSCCEEEEEEECSSEEEEEESSCCSSCCCEEETTTE--------EE
T ss_pred CccEEEEEEEcCCC---------------C----CCCCceEEEEEECCEEEEEcCCCCcccCCEEECCcc--------eE
Confidence 34699999987310 0 146999999999999999998887777777765421 11
Q ss_pred ccccccccccCCcceeEEEEeCceEEEEEecchhhHHHHHHHHHhcc
Q 002219 290 VSLATEVKERNPLRHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~i~~~~r~l~l~~~s~~~~~~w~~~i~~~~ 336 (952)
+. .. + .+.|.|....|.+.|.|.+...+.+|+.+|..+.
T Consensus 60 v~------~~-~-~~~F~i~~~~r~~~l~a~s~~e~~~Wi~~l~~~~ 98 (115)
T 2cod_A 60 VR------VQ-G-DNKFEVVTTQRTFVFRVEKEEERNDWISILLNAL 98 (115)
T ss_dssp EE------EE-T-TTEEEEEESSCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred EE------eC-C-CCEEEEEeCCcEEEEECCCHHHHHHHHHHHHHHH
Confidence 11 11 1 5789999999999999999999999999999865
No 41
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.49 E-value=7.8e-07 Score=83.65 Aligned_cols=96 Identities=16% Similarity=0.200 Sum_probs=73.3
Q ss_pred CCCcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCC--eEEEEeCCCCCCccEEEEEeCCCCCCCCC
Q 002219 209 GPKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPG--FLALLADPFDTKPMDIIVFDVLPASDGNG 286 (952)
Q Consensus 209 G~KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdS--fL~yv~d~~~~~~~~v~l~D~~~~~~~~~ 286 (952)
.+..+||||.|+... | . ...|++|||||+++ .|.|++++.+.++..+|-+...
T Consensus 6 ~~~~~~G~L~K~g~~---~-----------~----~k~WkkRwfvL~~~~~~L~Yy~~~~~~~~~g~I~L~~~------- 60 (119)
T 2dhk_A 6 SGKKLCGYLSKFGGK---G-----------P----IRGWKSRWFFYDERKCQLYYSRTAQDANPLDSIDLSSA------- 60 (119)
T ss_dssp SCCCCEEEEEECSCS---S-----------S----SCCCEEEEEEEETTTTEEEEESSTTCCSCSEEEEGGGC-------
T ss_pred CCCcEEEEEEecCCC---C-----------C----CCCceeEEEEEECCccEEEEECCCCCcccccEEECCCC-------
Confidence 456799999987310 0 0 15799999999999 9999998888888888866531
Q ss_pred CCcccccccccccCCcceeEEEEeCceEEEEEecchhhHHHHHHHHHhcc
Q 002219 287 EGRVSLATEVKERNPLRHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~i~~~~r~l~l~~~s~~~~~~w~~~i~~~~ 336 (952)
.+.. ......+.|.|....|.+.|.|.+...+.+|+.+|+.+.
T Consensus 61 --~~~~-----~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~al~~~~ 103 (119)
T 2dhk_A 61 --VFDC-----KADAEEGIFEIKTPSRVITLKAATKQAMLYWLQQLQMKR 103 (119)
T ss_dssp --EEEE-----CTTGGGCEEEEECSSCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred --EEEe-----cCCCCCCEEEEEeCCcEEEEECCCHHHHHHHHHHHHHHH
Confidence 1110 011235789999999999999999999999999998864
No 42
>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.48 E-value=4.1e-07 Score=87.51 Aligned_cols=97 Identities=16% Similarity=0.178 Sum_probs=74.4
Q ss_pred cceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCCeEEEEe----CCCCCCccEEEEEeCCCCCCCCCC
Q 002219 212 LKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLA----DPFDTKPMDIIVFDVLPASDGNGE 287 (952)
Q Consensus 212 gKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdSfL~yv~----d~~~~~~~~v~l~D~~~~~~~~~~ 287 (952)
-++|||.|+.. ... ..|++|||||++..|.|++ +..+..++.+|..+.
T Consensus 9 ~~~G~L~KqG~---------------~~~----K~WKrRwFVL~~~~LyYfk~~~~~~~~~~p~G~I~L~g--------- 60 (126)
T 1wi1_A 9 KHSGYLWAIGK---------------NVW----KRWKKRFFVLVQVSQYTFAMCSYREKKAEPQELLQLDG--------- 60 (126)
T ss_dssp EEEEEEEEECS---------------SSC----CSCEEEEEEEEEEETTEEEEEECCSSSSCCSEEEECSS---------
T ss_pred ceeEEEEEeCC---------------Ccc----cccceEEEEEeCCEEEEEEcccccccCCCCceEEECCC---------
Confidence 49999998721 001 4799999999999999998 778889999998874
Q ss_pred CcccccccccccCCcceeEEEEeCceEEEEEecchhhHHHHHHHHHhcc
Q 002219 288 GRVSLATEVKERNPLRHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~i~~~~r~l~l~~~s~~~~~~w~~~i~~~~ 336 (952)
..|.......+....++.|.|...+++..|.|.|...+..|+.+|..+.
T Consensus 61 ~tV~~~~~~~~~~~~k~~F~~v~~~~ty~~~Adseee~~~WikAi~~A~ 109 (126)
T 1wi1_A 61 YTVDYTDPQPGLEGGRAFFNAVKEGDTVIFASDDEQDRILWVQAMYRAT 109 (126)
T ss_dssp CEEEECCCCSSCCSCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred cEEEEecCCcccccCceEEEEecCCceEEEEcCCHHHHHHHHHHHHHHh
Confidence 2332211111123457899988888899999999999999999999976
No 43
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=98.47 E-value=9.7e-07 Score=83.15 Aligned_cols=95 Identities=19% Similarity=0.353 Sum_probs=74.3
Q ss_pred CCcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCCeEEEEeCCCCCCccEEEEEeCCCCCCCCCCCc
Q 002219 210 PKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGR 289 (952)
Q Consensus 210 ~KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdSfL~yv~d~~~~~~~~v~l~D~~~~~~~~~~~~ 289 (952)
.--|||||.|+. + . ...|++|||||+++.|.|++++.+.++..+|-++.- ..
T Consensus 17 ~~~~~G~L~K~g-----~-----------~----~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~--------~~ 68 (126)
T 1fao_A 17 LGTKEGYLTKQG-----G-----------L----VKTWKTRWFTLHRNELKYFKDQMSPEPIRILDLTEC--------SA 68 (126)
T ss_dssp TTCEEEEEEEEC-----S-----------S----SCCEEEEEEEEETTEEEEESSTTCSSCSEEEEGGGC--------CE
T ss_pred CccEEEEEEEcC-----C-----------C----CCCcccEEEEEECCEEEEeCCCCCCCceeEEEccce--------EE
Confidence 346999999872 1 0 147999999999999999998888888888876631 11
Q ss_pred ccccccccccCCcceeEEEEeCceEEEEEecchhhHHHHHHHHHhcc
Q 002219 290 VSLATEVKERNPLRHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~i~~~~r~l~l~~~s~~~~~~w~~~i~~~~ 336 (952)
+... +.....+.|.|.+..|.+.|.|.+...+..|+.+|..+.
T Consensus 69 v~~~----~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~al~~~i 111 (126)
T 1fao_A 69 VQFD----YSQERVNCFCLVFPFRTFYLCAKTGVEADEWIKILRWKL 111 (126)
T ss_dssp EEEE----CSSSSSSEEEEEETTEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEec----ccCCCCCEEEEEeCCcEEEEECCCHHHHHHHHHHHHHHH
Confidence 1111 123446899999999999999999999999999999865
No 44
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=98.46 E-value=5.8e-07 Score=84.18 Aligned_cols=99 Identities=13% Similarity=0.347 Sum_probs=74.7
Q ss_pred CCCcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCCeEEEEeCCCCCCccEEEEEeCCCCCCCCCCC
Q 002219 209 GPKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEG 288 (952)
Q Consensus 209 G~KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdSfL~yv~d~~~~~~~~v~l~D~~~~~~~~~~~ 288 (952)
+.-.+||||.|+. + . ...|++|||||+++.|.|+++..+.++..+|-++...
T Consensus 12 ~~~~~~G~L~K~g-----~-----------~----~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~l~~~~-------- 63 (125)
T 1eaz_A 12 SAVIKAGYCVKQG-----A-----------V----MKNWKRRYFQLDENTIGYFKSELEKEPLRVIPLKEVH-------- 63 (125)
T ss_dssp CCCSEEEEEEEEC-----T-----------T----TCCEEEEEEEECSSEEEEESSTTCSSCSEEEEGGGCC--------
T ss_pred CCccEEEEEEEeC-----C-----------C----CCCcceEEEEEeCCEEEEEcCCCCCcceeEEEcccce--------
Confidence 4457999999872 1 0 1479999999999999999988888888888776421
Q ss_pred cccccccccccCCcceeEEEEeCceEEEEEecchhhHHHHHHHHHhcc
Q 002219 289 RVSLATEVKERNPLRHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~i~~~~r~l~l~~~s~~~~~~w~~~i~~~~ 336 (952)
.+.... ..+.....+.|.|....|.+.|.|.+...+.+|+.+|..+.
T Consensus 64 ~v~~~~-~~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~W~~al~~~i 110 (125)
T 1eaz_A 64 KVQECK-QSDIMMRDNLFEIVTTSRTFYVQADSPEEMHSWIKAVSGAI 110 (125)
T ss_dssp EEEECT-THHHHTCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEeecc-ccccCCcCCEEEEEeCCcEEEEEcCCHHHHHHHHHHHHHHH
Confidence 111100 00112346889999999999999999999999999999875
No 45
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=98.44 E-value=1.3e-06 Score=82.27 Aligned_cols=98 Identities=22% Similarity=0.332 Sum_probs=72.7
Q ss_pred CCcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCCeEEEEeCCCCCCccEEEEEeCCCCCCCCCCCc
Q 002219 210 PKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGR 289 (952)
Q Consensus 210 ~KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdSfL~yv~d~~~~~~~~v~l~D~~~~~~~~~~~~ 289 (952)
.--+||||.|+.. .. ...|++|||||+++.|.|++++.+..+..+|.++. ..
T Consensus 20 ~~~~~G~L~K~~~---------------~~----~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~---------~~ 71 (128)
T 2dkp_A 20 PVVRRGWLYKQDS---------------TG----MKLWKKRWFVLSDLCLFYYRDEKEEGILGSILLPS---------FQ 71 (128)
T ss_dssp CCCEEEEEEEECC---------------SS----SCCEEEEEEEEETTEEEEESSTTCCSEEEEECGGG---------SE
T ss_pred CcEEEEEEEEeCC---------------CC----CCCceeEEEEEeCCEEEEECCCCCcccceEEEcCc---------eE
Confidence 4569999988731 00 15799999999999999999888888887775542 12
Q ss_pred ccccccccccCCcceeEEEEeCc-eEEEEEecchhhHHHHHHHHHhcc
Q 002219 290 VSLATEVKERNPLRHAFKVTCGV-RSIRLRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~i~~~~-r~l~l~~~s~~~~~~w~~~i~~~~ 336 (952)
+..... .+.....+.|.|.... |.+.|.|.+...+.+|+.+|..+.
T Consensus 72 v~~~~~-~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~ 118 (128)
T 2dkp_A 72 IALLTS-EDHINRKYAFKAAHPNMRTYYFCTDTGKEMELWMKAMLDAA 118 (128)
T ss_dssp EEECCG-GGCCSSCSEEEEECSSSCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEEcCC-cccCCCCeEEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHH
Confidence 211110 1122446899998874 999999999999999999999876
No 46
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.44 E-value=6.9e-07 Score=88.43 Aligned_cols=97 Identities=14% Similarity=0.192 Sum_probs=71.2
Q ss_pred CCCcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCCeEEEEeCCCCCCccEEEEEeCCCCCCCCCCC
Q 002219 209 GPKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEG 288 (952)
Q Consensus 209 G~KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdSfL~yv~d~~~~~~~~v~l~D~~~~~~~~~~~ 288 (952)
.+-.|||||.|+. + . . ..|++|||||++..|.|++++.+..+...|-+...
T Consensus 16 ~pv~keG~L~Kkg-----~----------~----~-k~WkrRWFvLk~~~L~Yyk~~~d~~~~g~I~L~~~--------- 66 (149)
T 1x1f_A 16 LPLYFEGFLLIKR-----S----------G----Y-REYEHYWTELRGTTLFFYTDKKSIIYVDKLDIVDL--------- 66 (149)
T ss_dssp SCEEEEEEEEEEC-----T----------T----C-CSCEEEEEEEETTEEEEESCSSCSSCSEECCCSSC---------
T ss_pred CCccEEEEEEEeC-----C----------C----C-CCceeEEEEEcCCEEEEEeCCCccccCcEEECCCc---------
Confidence 3467999999872 1 0 1 57999999999999999999877777665543321
Q ss_pred cccccccccccCCcceeEEEEeCceEEEEEecchhhHHHHHHHHHhcc
Q 002219 289 RVSLATEVKERNPLRHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~i~~~~r~l~l~~~s~~~~~~w~~~i~~~~ 336 (952)
.+..... ......+.|.|.+..|++.|.|.|...+.+|+.+|....
T Consensus 67 ~~~~~~~--~~~~~~~~F~I~t~~r~~~f~A~s~ee~~eWi~aI~~v~ 112 (149)
T 1x1f_A 67 TCLTEQN--STEKNCAKFTLVLPKEEVQLKTENTESGEEWRGFILTVT 112 (149)
T ss_dssp CEEEECC--CTTSCCCEEEEECSSCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred eEEeecc--CCCCcCcEEEEEcCCCEEEEEcCCHHHHHHHHHHHHHHH
Confidence 1100000 011125789999999999999999999999999998865
No 47
>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=98.44 E-value=7.9e-07 Score=85.35 Aligned_cols=98 Identities=15% Similarity=0.287 Sum_probs=70.9
Q ss_pred ceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEe---CCeEEEEeC----CCCCCccEEEEEeCCCCCCCC
Q 002219 213 KEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLK---PGFLALLAD----PFDTKPMDIIVFDVLPASDGN 285 (952)
Q Consensus 213 KEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVK---dSfL~yv~d----~~~~~~~~v~l~D~~~~~~~~ 285 (952)
+||||.|+.. + . ...|++|||||+ +..|.|+++ +.+.++..+|.+...
T Consensus 17 ~~G~L~K~g~----~----------~-----~k~WkrRwFvL~~~~~~~L~Y~k~~~~~~~~~~~~G~I~L~~~------ 71 (126)
T 1v5p_A 17 ICGFLDIEDN----E----------N-----SGKFLRRYFILDTQANCLLWYMDNPQNLAVGAGAVGSLQLTYI------ 71 (126)
T ss_dssp EECCEEEECT----T----------C-----SSCEEEEEEEEETTTTEEEEESSCTTTSCTTCCCSEEEETTTC------
T ss_pred eEEEEEEeCC----C----------C-----CCCccceEEEEecCCCCEEEEECCCCCCCCCceeeEEEECCCc------
Confidence 7999998731 0 0 147999999999 667888888 456778888866531
Q ss_pred CCCcccccccccccCCcceeEEEEeCceEEEEEecchhhHHHHHHHHHhccCC
Q 002219 286 GEGRVSLATEVKERNPLRHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDAGLR 338 (952)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~i~~~~r~l~l~~~s~~~~~~w~~~i~~~~~~ 338 (952)
..|..+.. +.....++.|.|.++.|+..|.|.|...+.+|+.+|..+...
T Consensus 72 --~~V~~~~~-~~~~~~~~~F~i~t~~r~y~l~A~s~~e~~~Wi~al~~a~~~ 121 (126)
T 1v5p_A 72 --SKVSIATP-KQKPKTPFCFVINALSQRYFLQANDQKDLKDWVEALNQASKS 121 (126)
T ss_dssp --CEEEECCT-TTSCSCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHTTTT
T ss_pred --cEEecCCc-ccCCCCCEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 12222110 112234688999999999999999999999999999997643
No 48
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.44 E-value=1.2e-06 Score=83.95 Aligned_cols=102 Identities=16% Similarity=0.261 Sum_probs=71.8
Q ss_pred CCCcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEE-eCCeEEEEeCCCCCCccEEEEEeCCCCCCCCCC
Q 002219 209 GPKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVL-KPGFLALLADPFDTKPMDIIVFDVLPASDGNGE 287 (952)
Q Consensus 209 G~KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvV-KdSfL~yv~d~~~~~~~~v~l~D~~~~~~~~~~ 287 (952)
+.-.|||||.|+.. . ...|++||||| +++.|.|++++.+..+...++.+..-
T Consensus 6 ~~v~~~G~L~K~g~----------------~----~k~WkkRwFVL~~~~~L~Yyk~~~~~~~~g~i~l~~~~------- 58 (130)
T 2d9v_A 6 SGLVRGGWLWRQSS----------------I----LRRWKRNWFALWLDGTLGYYHDETAQDEEDRVVIHFNV------- 58 (130)
T ss_dssp CCEEEEEEEEEECS----------------S----SCCEEEEEEEEETTTEEEEESSSSTTSEEEEEECTTTE-------
T ss_pred CceeEEEEEEeecC----------------c----cCCceeeEEEEccCCEEEEEeCCCCCCcCceEecccce-------
Confidence 34469999998821 0 14799999999 99999999988777777666554210
Q ss_pred Ccccccc---cc--cccCCcceeEEEEe-CceEEEEEecchhhHHHHHHHHHhccC
Q 002219 288 GRVSLAT---EV--KERNPLRHAFKVTC-GVRSIRLRTRTGAKVRDWVAAINDAGL 337 (952)
Q Consensus 288 ~~~~~~~---~~--~~~~~~~~~~~i~~-~~r~l~l~~~s~~~~~~w~~~i~~~~~ 337 (952)
..+..+. .+ .+....++.|.|.. ..|++.|.|.+...+.+|+.+|..+..
T Consensus 59 ~~i~~~~~~~~v~~~~~~~~~~~F~I~~~~~r~~~l~A~s~~e~~~Wi~al~~a~~ 114 (130)
T 2d9v_A 59 RDIKVGQECQDVQPPEGRSRDGLLTVNLREGSRLHLCAETRDDAIAWKTALMEANS 114 (130)
T ss_dssp EEEEEGGGCSSCCCCSSCCTTTEEEEEETTSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred eEEeccccccccCCCCCCCcCcEEEEEeCCCCEEEEEcCCHHHHHHHHHHHHHHHc
Confidence 0011110 00 01223468999988 559999999999999999999999864
No 49
>2csk_A Sorting nexin 12; SNX12, PX domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.43 E-value=7.7e-07 Score=87.51 Aligned_cols=116 Identities=16% Similarity=0.260 Sum_probs=75.0
Q ss_pred eEEEeeeeecCCCCCCcceeEEEEEEEec-----ceEEEEEEehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 002219 45 KASIVSVSRPDAGDISPMLLSYTIEVQYK-----QFKWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEWLQNLGMG 119 (952)
Q Consensus 45 ~v~I~~~er~~s~~~~~~~~~Y~Iel~~g-----~~~W~v~r~~~~f~~Lh~~lk~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (952)
.|.|.+.+....+. ..+++|+|+++.+ .-.|+|.|||+||..||.+|+.. ...-+|
T Consensus 12 ~i~V~dp~~~~~g~--~~yv~Y~I~v~~~~~~~~~~~~~V~RRYsdF~~L~~~L~~~-----------------~~~~iP 72 (146)
T 2csk_A 12 EIDIFNPQTVGVGR--ARFTTYEVRMRTNLPIFKLKESCVRRRYSDFEWLKNELERD-----------------SKIVVP 72 (146)
T ss_dssp EEEEEEEEEESSSS--SCEEEEEEEEECCCSSSSCSEEEEEECHHHHHHHHHHHSSS-----------------SSCCCC
T ss_pred EEEEcCceEecCCC--CCEEEEEEEEEECCCCcCcCceEEEecHHHHHHHHHHHHhc-----------------cCCcCC
Confidence 68888888654432 2489999999865 45899999999999999988731 011111
Q ss_pred CCccccccCccccccccccccccccCCCCCCCCCCCCCCcccc-CCCcchHHHHHHHHHHHHHHhccccccchhhhheee
Q 002219 120 DHMAVVQEDDEGDEIAVNHDESSKKRDVPANAALPVIRPALGR-QHSMSDRAKVAMQQYLNHFLGNMDIVNSREVCKFLE 198 (952)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~lp~~~~~~~~-~~~~~~r~~~~LE~YL~~lL~~~~~~n~~~l~~Fle 198 (952)
+..++. + ...++- ....++ ...+-++||.+||.||+.++..+.++++..+..||+
T Consensus 73 ~lP~K~---------------------~--~~~~~~-~~~~g~~~~~fie~Rr~~Le~fL~~l~~~p~l~~s~~l~~FL~ 128 (146)
T 2csk_A 73 PLPGKA---------------------L--KRQLPF-RGDEGIFEESFIEERRQGLEQFINKIAGHPLAQNERCLHMFLQ 128 (146)
T ss_dssp CCSCCC---------------------C--CCSSTT-CCCSSCCCHHHHHHHHHHHHHHHHHHHHCHHHHHCHHHHHHTT
T ss_pred CCCCCc---------------------h--hhcccc-ccccCCCCHHHHHHHHHHHHHHHHHHHcChhhccCcHHHhhcC
Confidence 111110 0 000000 000011 123334556799999999999999999999999999
Q ss_pred eccCC
Q 002219 199 ASKLS 203 (952)
Q Consensus 199 vS~~s 203 (952)
...+.
T Consensus 129 ~~~~~ 133 (146)
T 2csk_A 129 EEAID 133 (146)
T ss_dssp CSSCC
T ss_pred CCchh
Confidence 88663
No 50
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*
Probab=98.40 E-value=1.6e-06 Score=81.24 Aligned_cols=94 Identities=15% Similarity=0.294 Sum_probs=68.9
Q ss_pred CCcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCCeEEEEeCCCCCCccEEEEEeCCCCCCCCCCCc
Q 002219 210 PKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGR 289 (952)
Q Consensus 210 ~KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdSfL~yv~d~~~~~~~~v~l~D~~~~~~~~~~~~ 289 (952)
.--|||||.|+. + . ...|++|||||+++.|.|++++.+.++..+|.++.- .
T Consensus 4 ~~~~~G~L~K~g-----~----------~-----~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~---------~ 54 (127)
T 1fgy_A 4 NPDREGWLLKLG-----G----------R-----VKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENL---------S 54 (127)
T ss_dssp SCSEEEEEEEEC-----S----------S-----SCCEEEEEEEEETTEEEEESSTTCSSCSEEEECTTC---------E
T ss_pred CCceEeEEEEEC-----C----------C-----CCCeEEEEEEEECCEEEEeCCCCCCCcceEEECCce---------E
Confidence 346999999872 1 0 147999999999999999998888889888876631 1
Q ss_pred ccccccccccCCcceeEEEEe----------------------CceEEEEEecchhhHHHHHHHHHhcc
Q 002219 290 VSLATEVKERNPLRHAFKVTC----------------------GVRSIRLRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~i~~----------------------~~r~l~l~~~s~~~~~~w~~~i~~~~ 336 (952)
+... +.....+.|.|.+ ..|.+.|.|.|...+.+|+.+|..+.
T Consensus 55 v~~~----~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~v~~~~r~~~l~a~s~~e~~~Wi~al~~~i 119 (127)
T 1fgy_A 55 IREV----LDPRKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASI 119 (127)
T ss_dssp EEEE----CCSSCSSEEEEECSSSTTCCCCCEEECTTSCEEECCCSEEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEEc----cCCCCCceEEEecCCccccccccccccCCcceecCCceEEEEECCCHHHHHHHHHHHHHHh
Confidence 1100 0122345565554 35889999999999999999999865
No 51
>1kmd_A VAM7P, vacuolar morphogenesis protein VAM7; PX domain, phosphoinositide binding, endocytosis/exocytosis complex; NMR {Saccharomyces cerevisiae} SCOP: d.189.1.1
Probab=98.39 E-value=2.9e-07 Score=87.23 Aligned_cols=99 Identities=20% Similarity=0.319 Sum_probs=67.0
Q ss_pred eEEEeeeeecCCCCCCcceeEEEEEEEecceEEEEEEehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccc
Q 002219 45 KASIVSVSRPDAGDISPMLLSYTIEVQYKQFKWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEWLQNLGMGDHMAV 124 (952)
Q Consensus 45 ~v~I~~~er~~s~~~~~~~~~Y~Iel~~g~~~W~v~r~~~~f~~Lh~~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (952)
.|.|.+.+.. ..+++|+|++ =.|+|.|||+||..||.+|+.. +. ..+|+ +
T Consensus 7 ~v~I~~~~~~------~~~~~Y~I~v----~~~~V~RRYsdF~~L~~~L~~~------------~~---~~~P~-~---- 56 (117)
T 1kmd_A 7 RIKVDDVKIN------PKYVLYGVST----PNKRLYKRYSEFWKLKTRLERD------------VG---STIPY-D---- 56 (117)
T ss_dssp CCEEEEEEEC------SSCEEEEEEC----SSCCEEECHHHHHHHHHHHHHH------------HC---SCCCC-C----
T ss_pred EEEECCceec------CCEEEEEEEE----ceEEEEechHHHHHHHHHHHHH------------cC---ccCCC-C----
Confidence 6888888871 1478999999 2899999999999999988841 10 01110 1
Q ss_pred cccCccccccccccccccccCCCCCCCCCCCCCCc----c--c-cCCCcchHHHHHHHHHHHHHHhccc---cccchhhh
Q 002219 125 VQEDDEGDEIAVNHDESSKKRDVPANAALPVIRPA----L--G-RQHSMSDRAKVAMQQYLNHFLGNMD---IVNSREVC 194 (952)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~lp~~~~~----~--~-~~~~~~~r~~~~LE~YL~~lL~~~~---~~n~~~l~ 194 (952)
||.-+.. + + ....+-+.||.+||.||+.++..+. ++++..+.
T Consensus 57 ----------------------------lP~K~~~~~~~~~~~~~~~~~ie~Rr~~Le~yL~~l~~~p~l~~~~~s~~l~ 108 (117)
T 1kmd_A 57 ----------------------------FPEKPGVLDRRWQRRYDDPEMIDERRIGLERFLNELYNDRFDSRWRDTKIAQ 108 (117)
T ss_dssp ----------------------------CCCCCCSSCSTTCCCTTCHHHHHHHHTTHHHHHHHHHCCSSCCHHHHSHHHH
T ss_pred ----------------------------CCCCCEecccccccCCCCHHHHHHHHHHHHHHHHHHHhCcchhhhhcCHHHH
Confidence 1110000 1 1 1123334556799999999998874 47899999
Q ss_pred heeeecc
Q 002219 195 KFLEASK 201 (952)
Q Consensus 195 ~FlevS~ 201 (952)
+||+++.
T Consensus 109 ~FL~~~~ 115 (117)
T 1kmd_A 109 DFLQLSK 115 (117)
T ss_dssp HHTTCCC
T ss_pred HhcCCCC
Confidence 9999864
No 52
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.39 E-value=1.7e-06 Score=83.51 Aligned_cols=94 Identities=18% Similarity=0.353 Sum_probs=70.3
Q ss_pred CCCcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCCeEEEEeCCCCCCccEEEEEeCCCCCCCCCCC
Q 002219 209 GPKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEG 288 (952)
Q Consensus 209 G~KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdSfL~yv~d~~~~~~~~v~l~D~~~~~~~~~~~ 288 (952)
+.--|||||.|+. + ...|++||||||++.|.|++++.+..+..+|.++..
T Consensus 6 ~~v~k~GwL~K~g-----~----------------~k~WkrRWfVLk~~~L~yyk~~~~~~p~G~I~L~~~--------- 55 (130)
T 1v88_A 6 SGIVMADWLKIRG-----T----------------LKSWTKLWCVLKPGVLLIYKTQKNGQWVGTVLLNAC--------- 55 (130)
T ss_dssp SSCCEEEEEEECC-----S----------------SSSCEEEEEEEETTEEEEESCSSSCCCCEEEECSSC---------
T ss_pred CceEEEeEEEEeC-----C----------------CCCceEEEEEEECCEEEEECCCCCCCceEEEEcCCC---------
Confidence 3346999998861 0 147999999999999999999988999999988641
Q ss_pred cccccccccccCCcceeEEEEeCc------------------------eEEEEEecchhhHHHHHHHHHhcc
Q 002219 289 RVSLATEVKERNPLRHAFKVTCGV------------------------RSIRLRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~i~~~~------------------------r~l~l~~~s~~~~~~w~~~i~~~~ 336 (952)
.+. .. ......+.|.|.+.. |.+.|.|.|..++.+|+.+|+.+.
T Consensus 56 ~v~-~~---~~~~~~~~F~i~~~~~~~i~~~~g~~~~~~g~~~~~~~~~~~~f~A~s~~e~~~Wi~ai~~a~ 123 (130)
T 1v88_A 56 EII-ER---PSKKDGFCFKLFHPLEQSIWAVKGPKGEAVGSITQPLPSSYLIIRATSESDGRCWMDALELAL 123 (130)
T ss_dssp EEC-CC---CTTTSSCEEEEECTTCCCCSCSSCTTSCSCSCCCSCCCSSCCEEECSSHHHHHHHHHHHHHHH
T ss_pred EEE-EC---CCCCCCeEEEEEcCCccccccccCCcccccccccccCCceEEEEECCCHHHHHHHHHHHHHHH
Confidence 121 00 111234788887542 348899999999999999999876
No 53
>3iq2_A Sorting nexin-7; SNX7, PHOX, protein signalling, SGC, structur genomics consortium, protein transport, transport; 1.70A {Homo sapiens}
Probab=98.38 E-value=1.2e-06 Score=85.55 Aligned_cols=109 Identities=14% Similarity=0.220 Sum_probs=74.1
Q ss_pred eEEEeeeeecCCCCCCcceeEEEEEEEec-----ceEEEEEEehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 002219 45 KASIVSVSRPDAGDISPMLLSYTIEVQYK-----QFKWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEWLQNLGMG 119 (952)
Q Consensus 45 ~v~I~~~er~~s~~~~~~~~~Y~Iel~~g-----~~~W~v~r~~~~f~~Lh~~lk~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (952)
.|.|.+.+...++. ..+++|+|+++.. .-.|+|.|||+||..||.+|+.. ...+-+
T Consensus 10 ~i~V~dp~~~~~g~--~~yv~Y~I~v~t~~~~f~~~~~~V~RRYsdF~~L~~~L~~~----------------~p~~~i- 70 (138)
T 3iq2_A 10 FITVDEPESHVTTI--ETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEA----------------HPTLII- 70 (138)
T ss_dssp EEEEEEEEEEECSS--CEEEEEEEEEESCSSSSSCCEEEEEEEHHHHHHHHHHHHHH----------------CTTSCC-
T ss_pred EEEECCCEEecCCC--CCEEEEEEEEEECCCCcCCCeEEEEcChHHHHHHHHHHHHH----------------CcCccc-
Confidence 57888877543332 2589999999864 34899999999999999988841 011111
Q ss_pred CCccccccCccccccccccccccccCCCCCCCCCCCCCC--c-ccc-CCCcchHHHHHHHHHHHHHHhccccccchhhhh
Q 002219 120 DHMAVVQEDDEGDEIAVNHDESSKKRDVPANAALPVIRP--A-LGR-QHSMSDRAKVAMQQYLNHFLGNMDIVNSREVCK 195 (952)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~lp~~~~--~-~~~-~~~~~~r~~~~LE~YL~~lL~~~~~~n~~~l~~ 195 (952)
|. ||.-+. . .++ ...+-+.||++||.||+.++..+.++++..+..
T Consensus 71 ----------------------------P~---lP~K~~~~~~~~~~~~~fie~Rr~~Le~fL~~l~~~p~l~~s~~~~~ 119 (138)
T 3iq2_A 71 ----------------------------PP---LPEKFIVKGMVERFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKI 119 (138)
T ss_dssp ----------------------------CC---CCCCC----CCGGGCHHHHHHHHHHHHHHHHHHHHSTTGGGCHHHHH
T ss_pred ----------------------------CC---CCcchhhccccccCCHHHHHHHHHHHHHHHHHHHcCHhhhcChHHHh
Confidence 11 222100 0 011 123334456799999999999999999999999
Q ss_pred eeeeccCC
Q 002219 196 FLEASKLS 203 (952)
Q Consensus 196 FlevS~~s 203 (952)
||+.....
T Consensus 120 FL~~~~~~ 127 (138)
T 3iq2_A 120 FLTAQAWE 127 (138)
T ss_dssp HHHTTCBC
T ss_pred hhCCCCCC
Confidence 99987653
No 54
>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A
Probab=98.37 E-value=1.9e-06 Score=82.42 Aligned_cols=96 Identities=19% Similarity=0.295 Sum_probs=72.6
Q ss_pred cceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCCeEEEEeCCCCCCccEEEEEeCCCCCCCCCCCccc
Q 002219 212 LKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGRVS 291 (952)
Q Consensus 212 gKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdSfL~yv~d~~~~~~~~v~l~D~~~~~~~~~~~~~~ 291 (952)
-|+|+|.|+.+ | .....|++|||||++.+|.|++|..+..++.+|..|... +
T Consensus 13 irkGWL~k~~~----g--------------~~k~~wk~rWFVLt~~~L~yyKd~~eke~~G~IpL~~~~---------v- 64 (125)
T 1dyn_A 13 IRKGWLTINNI----G--------------IMKGGSKEYWFVLTAENLSWYKDDEEKEKKYMLSVDNLK---------L- 64 (125)
T ss_dssp EEEEEEEESCC----C--------------GGGTSSEEEEEEEESSEEEEESSTTCSCEEEEEECTTEE---------E-
T ss_pred EEEEEEEEecC----c--------------cccCCceeeEEEEeccceeeecCCcccccceEEECCCce---------E-
Confidence 79999998631 1 111469999999999999999999999999999888531 1
Q ss_pred ccccccccCCcceeEEEEeCc--------eEEEEEecchhhHHHHHHHHHhcc
Q 002219 292 LATEVKERNPLRHAFKVTCGV--------RSIRLRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 292 ~~~~~~~~~~~~~~~~i~~~~--------r~l~l~~~s~~~~~~w~~~i~~~~ 336 (952)
.......-..+|.|.|.+.. +.+.|.|.|...+.+|.++|..++
T Consensus 65 -r~v~~~~~~rk~~F~l~~~d~r~v~~~h~~y~LsA~t~ee~~~Wi~s~~ra~ 116 (125)
T 1dyn_A 65 -RDVEKGFMSSKHIFALFNTEQRNVYKDYRQLELACETQEEVDSWKASFLRAG 116 (125)
T ss_dssp -EECCSCSSSSCEEEEEEETTSSCSSTTCSSEEEEESSHHHHHHHHHHHHHTT
T ss_pred -eccCCCCCCCceEEEEECCCCccccccceEEEEeCCCHHHHHHHHHHHHhCc
Confidence 11000001346889998864 489999999999999999998775
No 55
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A
Probab=98.36 E-value=1.5e-06 Score=80.18 Aligned_cols=103 Identities=14% Similarity=0.257 Sum_probs=69.0
Q ss_pred cceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEE-eCCeEEEEeCCCCCCccEEEEEeCCCCCCCCCCCcc
Q 002219 212 LKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVL-KPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGRV 290 (952)
Q Consensus 212 gKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvV-KdSfL~yv~d~~~~~~~~v~l~D~~~~~~~~~~~~~ 290 (952)
-|||||.|+.. . ...|++||||| +++.|.|++++.+.++...+-+.... ++......+
T Consensus 6 ~~~G~L~K~g~----------------~----~k~WkkR~fvL~~~~~L~yyk~~~~~~~~g~i~l~~~~-i~l~~~~~v 64 (112)
T 3aj4_A 6 VKSGWLLRQST----------------I----LKRWKKNWFDLWSDGHLIYYDDQTRQNIEDKVHMPMDC-INIRTGQEC 64 (112)
T ss_dssp SEEEEEEEECS----------------S----SCCEEEEEEEECTTSEEEEESSTTCCSEEEEEEHHHHE-EEEEEGGGC
T ss_pred eEEEEEEeeCC----------------C----CCCeeceEEEEeeCCEEEEEcCCCCCCCCccccccccc-eeecccccc
Confidence 59999998721 0 14799999999 99999999988887777766543210 000000001
Q ss_pred cccccccccCCcceeEEEEe-CceEEEEEecchhhHHHHHHHHHhcc
Q 002219 291 SLATEVKERNPLRHAFKVTC-GVRSIRLRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 291 ~~~~~~~~~~~~~~~~~i~~-~~r~l~l~~~s~~~~~~w~~~i~~~~ 336 (952)
.... ..+.....+.|.|.. .+|.+.|.|.|...+.+|+.+|+.+.
T Consensus 65 ~~v~-~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~ 110 (112)
T 3aj4_A 65 RDTQ-PPDGKSKDCMLQIVCRDGKTISLCAESTDDCLAWKFTLQDSR 110 (112)
T ss_dssp CSCC-CSTTCCGGGEEEEEETTSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred cccC-CCCCCCcCcEEEEEecCCcEEEEEeCCHHHHHHHHHHHHHHh
Confidence 0000 001112257999985 48999999999999999999999864
No 56
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.36 E-value=2.6e-06 Score=78.38 Aligned_cols=93 Identities=10% Similarity=0.228 Sum_probs=68.1
Q ss_pred CCcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCCeEEEEeCCCCCCccEEEEEeCCCCCCCCCCCc
Q 002219 210 PKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGR 289 (952)
Q Consensus 210 ~KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdSfL~yv~d~~~~~~~~v~l~D~~~~~~~~~~~~ 289 (952)
.--+||||.|+. . ..|++|||||+++.|.|++++.+ .....+.++.. ...
T Consensus 7 ~~~~~G~L~K~~-----~-----------------k~Wk~RwfvL~~~~L~yyk~~~~-~~~~~~~i~l~-------~~~ 56 (107)
T 2cof_A 7 GLETSSYLNVLV-----N-----------------SQWKSRWCSVRDNHLHFYQDRNR-SKVAQQPLSLV-------GCE 56 (107)
T ss_dssp CCTTCCEEEEEE-----T-----------------TEEEEEEEEECSSCEEEECSSTT-CSEEEEEECTT-------TCE
T ss_pred CCcEeEEEEEec-----C-----------------CCcceEEEEEECCEEEEEeCCcc-cCCCeeEEecc-------ceE
Confidence 446999999861 0 46999999999999999987654 44445545421 111
Q ss_pred ccccccccccCCcceeEEEEeC-ceEEEEEecchhhHHHHHHHHHhcc
Q 002219 290 VSLATEVKERNPLRHAFKVTCG-VRSIRLRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~i~~~-~r~l~l~~~s~~~~~~w~~~i~~~~ 336 (952)
+.... .....+.|.|... .|.+.|.|.|...+.+|+.+|..+.
T Consensus 57 v~~~~----~~~~~~~F~i~~~~~r~~~l~A~s~~e~~~Wi~al~~~~ 100 (107)
T 2cof_A 57 VVPDP----SPDHLYSFRILHKGEELAKLEAKSSEEMGHWLGLLLSES 100 (107)
T ss_dssp EECCC----BTTBSCEEEEEETTEEEEEEECSSHHHHHHHHHHHHHHS
T ss_pred EEECC----CCCCCeEEEEEeCCCeEEEEEcCCHHHHHHHHHHHHHHH
Confidence 22111 1234689999887 8889999999999999999999875
No 57
>1ocs_A Sorting nexin GRD19; sorting protein, PX-domain, yeast protein; HET: CME; 2.03A {Saccharomyces cerevisiae} SCOP: d.189.1.1 PDB: 1ocu_A*
Probab=98.35 E-value=1.5e-06 Score=87.17 Aligned_cols=113 Identities=19% Similarity=0.279 Sum_probs=74.1
Q ss_pred eEEEeeeeecCC-C-CCCcceeEEEEEEEe-----cceEEEEEEehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 002219 45 KASIVSVSRPDA-G-DISPMLLSYTIEVQY-----KQFKWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEWLQNLG 117 (952)
Q Consensus 45 ~v~I~~~er~~s-~-~~~~~~~~Y~Iel~~-----g~~~W~v~r~~~~f~~Lh~~lk~~~~~~~~~~~~~~~~~~~~~~~ 117 (952)
.|.|.+.+.... + +....+++|+|+++. +.-.|+|.|||+||..||.+|+... . ....+
T Consensus 37 ~i~V~dp~~~~~~g~~~~~~yv~Y~I~v~~~~~~f~~~~~~V~RRYsdF~~Lh~~L~~~~------------~--~~~~p 102 (162)
T 1ocs_A 37 EIEVHNPKTHIPNGMDSKGMFTDYEIICRTNLPSFHKRVSKVRRRYSDFEFFRKCLIKEI------------S--MLNHP 102 (162)
T ss_dssp EEEEEEEEEECCCSTTSCCCEEEEEEEEEECCTTCSCSEEEEEEEHHHHHHHHHHHHHHH------------H--HTTCT
T ss_pred EEEEeCCEEeeccCCCCCCCeEEEEEEEEECCCCCCcceeEEEeeHHHHHHHHHHHHHHh------------c--cccCC
Confidence 688888876521 1 212358999999986 3468999999999999999987411 0 00000
Q ss_pred CCCCccccccCccccccccccccccccCCCCCCCCCCCCCCccc-c-CCCcchHHHHHHHHHHHHHHhcccccc-chhhh
Q 002219 118 MGDHMAVVQEDDEGDEIAVNHDESSKKRDVPANAALPVIRPALG-R-QHSMSDRAKVAMQQYLNHFLGNMDIVN-SREVC 194 (952)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~lp~~~~~~~-~-~~~~~~r~~~~LE~YL~~lL~~~~~~n-~~~l~ 194 (952)
...+|. ||.-+ .++ + ...+-++||..||.||+.++..+.+++ +..+.
T Consensus 103 --------------------------~~~iP~---lP~K~-~~~~~~~~~fie~Rr~~Le~fL~~l~~~p~l~~~s~~l~ 152 (162)
T 1ocs_A 103 --------------------------KVMVPH---LPGKI-LLSNRFSNEVIEERRQGLNTWMQSVAGHPLLQSGSKVLV 152 (162)
T ss_dssp --------------------------TCCCCC---CTTCC-CSSCTTSHHHHHHHHHHHHHHHHHHHTCHHHHHHCHHHH
T ss_pred --------------------------CccCCC---CCCCc-ccccCCCHHHHHHHHHHHHHHHHHHHcCHHhhhCCHHHH
Confidence 011222 44211 111 1 223334556799999999999999987 89999
Q ss_pred heeeecc
Q 002219 195 KFLEASK 201 (952)
Q Consensus 195 ~FlevS~ 201 (952)
.||+...
T Consensus 153 ~FL~~~~ 159 (162)
T 1ocs_A 153 RFIEAEK 159 (162)
T ss_dssp HHHHCSS
T ss_pred HhCCCcc
Confidence 9999764
No 58
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=98.34 E-value=2.3e-06 Score=78.13 Aligned_cols=98 Identities=16% Similarity=0.284 Sum_probs=70.2
Q ss_pred CCCcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCC--eEEEEeCCCCCCccEEEEEeCCCCCCCCC
Q 002219 209 GPKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPG--FLALLADPFDTKPMDIIVFDVLPASDGNG 286 (952)
Q Consensus 209 G~KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdS--fL~yv~d~~~~~~~~v~l~D~~~~~~~~~ 286 (952)
+.-.|||||.|+. + . ...|++|||||+++ .|.|++++.+..+..++-++.-
T Consensus 5 ~~~~~~G~L~K~g-----~-----------~----~~~Wk~R~fvL~~~~~~L~yyk~~~~~~~~g~i~L~~~------- 57 (109)
T 2i5f_A 5 GVIIKQGCLLKQG-----H-----------R----RKNWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRGC------- 57 (109)
T ss_dssp CCEEEEEEEEEEC-----T-----------T----TCCEEEEEEEEETTTTEEEEECTTSCSSCSEEEECTTC-------
T ss_pred CceeEEEEEEEcC-----C-----------C----CCCceEEEEEEeCCCcEEEEECCCCCCCccEEEECCCC-------
Confidence 4456999999872 1 0 14699999999987 9999998888889888877631
Q ss_pred CCccc-ccccc-cccCCcceeEEEEeCc-eEEEEEecchhhHHHHHHHHHhc
Q 002219 287 EGRVS-LATEV-KERNPLRHAFKVTCGV-RSIRLRTRTGAKVRDWVAAINDA 335 (952)
Q Consensus 287 ~~~~~-~~~~~-~~~~~~~~~~~i~~~~-r~l~l~~~s~~~~~~w~~~i~~~ 335 (952)
.+. +.... .......+.|.|.... +.+.|.|.|...+.+|+.+|..+
T Consensus 58 --~v~~~~~~~~~~~~~~~~~F~i~~~~~~~~~l~a~s~~e~~~Wi~ai~~~ 107 (109)
T 2i5f_A 58 --VVTSVESNSNGRKSEEENLFEIITADEVHYFLQAATPKERTEWIKAIQMA 107 (109)
T ss_dssp --EEEEECC--------CCSEEEEECTTCCEEEEECSSHHHHHHHHHHHHHH
T ss_pred --EEEEccCCcccccCCCceEEEEEeCCCCEEEEEcCCHHHHHHHHHHHHHH
Confidence 111 00000 0011246889998876 56999999999999999999875
No 59
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=98.32 E-value=2.2e-06 Score=85.65 Aligned_cols=105 Identities=11% Similarity=0.127 Sum_probs=70.8
Q ss_pred CCcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCCeEEEEeCCCCC-CccEEEEEeCCCCCCCCCCC
Q 002219 210 PKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDT-KPMDIIVFDVLPASDGNGEG 288 (952)
Q Consensus 210 ~KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdSfL~yv~d~~~~-~~~~v~l~D~~~~~~~~~~~ 288 (952)
.--+||||.||+..+. -+. ...|++|||||+++.|.|++++.+. .+..+|.+.....
T Consensus 14 ~~i~EG~L~Kr~~~kk-------------~~~--~knWKkRwFVL~~~~L~Yyk~~~~~~~~~G~I~L~~~~~------- 71 (164)
T 2lul_A 14 NTILEEILIKRSQQKK-------------KTS--PLNYKERLFVLTKSMLTYYEGRAEKKYRKGFIDVSKIKC------- 71 (164)
T ss_dssp SEEEEEEEEEECCCCS-------------SSC--CCCEEEEEEEEESSEEEEECCCSSSCCCCCEEEGGGCCE-------
T ss_pred CeeEEEEEEEecCCCC-------------CCC--CCCceeEEEEEECCEEEEEeccCcccccccEEEEeeeEE-------
Confidence 3579999999853111 011 1469999999999999999876433 3455554432110
Q ss_pred ccccccc--ccccCCcceeEEEEeCceEEEEEecchhhHHHHHHHHHhccC
Q 002219 289 RVSLATE--VKERNPLRHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDAGL 337 (952)
Q Consensus 289 ~~~~~~~--~~~~~~~~~~~~i~~~~r~l~l~~~s~~~~~~w~~~i~~~~~ 337 (952)
+..... ........+.|.|....|.+.|.|.|.....+|+.+|++...
T Consensus 72 -v~~~~~~~~~~~~~~~~~f~i~t~~rt~~l~A~s~~e~~~Wi~aL~~~i~ 121 (164)
T 2lul_A 72 -VEIVKNDDGVIPCQNKYPFQVVHDANTLYIFAPSPQSRDLWVKKLKEEIK 121 (164)
T ss_dssp -EEECCCCSSSCCSSSCSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred -EEeccccccCcccccceeEEEecCCcEEEEECCCHHHHHHHHHHHHHHHH
Confidence 100000 001123467899999999999999999999999999998764
No 60
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A
Probab=98.30 E-value=6.2e-06 Score=74.83 Aligned_cols=77 Identities=17% Similarity=0.349 Sum_probs=57.9
Q ss_pred CCcceEEEEEeCCeEEEEeCCCC--CCccEEEEEeCCCCCCCCCCCcccccccccccCCcceeEEEEeC-ceEEEEEecc
Q 002219 245 DNWQKVWAVLKPGFLALLADPFD--TKPMDIIVFDVLPASDGNGEGRVSLATEVKERNPLRHAFKVTCG-VRSIRLRTRT 321 (952)
Q Consensus 245 ~rw~kRWfvVKdSfL~yv~d~~~--~~~~~v~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~r~l~l~~~s 321 (952)
..|++|||||+++.|.|++++.+ ..+..+|-+.. ..+.. .....+.|.|... .|.+.|.|.|
T Consensus 13 k~Wk~R~fvL~~~~L~Yy~~~~~~~~~~~g~i~L~~---------~~v~~------~~~~~~~F~i~~~~~r~~~l~a~s 77 (103)
T 3rcp_A 13 TGWQPRWFVLDNGILSYYDSQDDVCKGSKGSIKMAV---------CEIKV------HSADNTRMELIIPGEQHFYMKAVN 77 (103)
T ss_dssp TCEEEEEEEEETTEEEEESSCC---CCCSCEEEGGG---------CEEEC------CTTCSSEEEEEETTTEEEEEECSS
T ss_pred CCeeceEEEEECCEEEEEecCCcccCCcccEEEeee---------eEEEE------cCCCCceEEEEeCCCCEEEEECCC
Confidence 57999999999999999998764 24666654431 11211 1123578888875 8999999999
Q ss_pred hhhHHHHHHHHHhcc
Q 002219 322 GAKVRDWVAAINDAG 336 (952)
Q Consensus 322 ~~~~~~w~~~i~~~~ 336 (952)
......|+.+|+.+.
T Consensus 78 ~~e~~~Wi~al~~a~ 92 (103)
T 3rcp_A 78 AAERQRWLVALGSSK 92 (103)
T ss_dssp HHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999976
No 61
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=98.27 E-value=3.3e-06 Score=79.78 Aligned_cols=99 Identities=16% Similarity=0.278 Sum_probs=72.1
Q ss_pred CCCcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCC--eEEEEeCCCCCCccEEEEEeCCCCCCCCC
Q 002219 209 GPKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPG--FLALLADPFDTKPMDIIVFDVLPASDGNG 286 (952)
Q Consensus 209 G~KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdS--fL~yv~d~~~~~~~~v~l~D~~~~~~~~~ 286 (952)
+.-.|||||.|+. + . ...|++|||||+++ +|.|++++.+..+..+|-++.-
T Consensus 16 ~~~~~~G~L~K~g-----~-----------~----~~~Wk~R~fvL~~~~~~L~yy~~~~~~~~~g~i~L~~~------- 68 (129)
T 1x05_A 16 GVIIKQGCLLKQG-----H-----------R----RKNWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRGC------- 68 (129)
T ss_dssp SEEEEEEEEEECC-----S-----------S----CCCCEEEEEEEEETTTEEEEECSSCCSSCSEEEECTTC-------
T ss_pred CCceEEEEEEecC-----C-----------C----CCCCeeEEEEEeCCCCEEEEECCCCCCcceeEEEccCC-------
Confidence 4457999999872 1 0 14699999999986 9999998888888888876631
Q ss_pred CCccc-cccc-ccccCCcceeEEEEeCc-eEEEEEecchhhHHHHHHHHHhcc
Q 002219 287 EGRVS-LATE-VKERNPLRHAFKVTCGV-RSIRLRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 287 ~~~~~-~~~~-~~~~~~~~~~~~i~~~~-r~l~l~~~s~~~~~~w~~~i~~~~ 336 (952)
.+. +... ........+.|.|.... |.+.|.|.+...+.+|+.+|..+.
T Consensus 69 --~v~~~~~~~~~~~~~~~~~F~i~~~~~~~~~l~a~s~~e~~~Wi~al~~~~ 119 (129)
T 1x05_A 69 --VVTSVESNSNGRKSEEENLFEIITADEVHYFLQAATPKERTEWIKAIQMAS 119 (129)
T ss_dssp --EEEECCCCCCSSSCSSCSEEEEECTTCCCCEEECSSHHHHHHHHHHHHHHH
T ss_pred --EEEEccCCccccccCCCeEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHH
Confidence 111 0000 00012246889999875 669999999999999999999976
No 62
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=98.27 E-value=2e-06 Score=86.49 Aligned_cols=111 Identities=12% Similarity=0.091 Sum_probs=69.4
Q ss_pred cceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCCeEEEEeC----CCCCCccEEEEEeCCCCCCCC--
Q 002219 212 LKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLAD----PFDTKPMDIIVFDVLPASDGN-- 285 (952)
Q Consensus 212 gKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdSfL~yv~d----~~~~~~~~v~l~D~~~~~~~~-- 285 (952)
-|||||.|+...+ ..+ ....|++|||||++..|.|+++ ..+.++..+|-++.......-
T Consensus 4 ikeG~L~Kr~~~~-------------~~~--~~k~WKkRwFVL~~~~L~Yyk~~~~~~~~~~~~G~I~L~~~~~ve~~~~ 68 (169)
T 1btk_A 4 ILESIFLKRSQQK-------------KKT--SPLNFKKCLFLLTVHKLSYYEYDFERGRRGSKKGSIDVEKITCVETVVP 68 (169)
T ss_dssp CEEEEEEEECCCS-------------STT--CCCCEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEEGGGEEEEEECCC
T ss_pred EEEEEEEEecCCC-------------CCc--ccCCCceEEEEEcCCEEEEEecCCccCCCCceeeEEECcceEEEEeccC
Confidence 4999999984211 000 1146999999999999999997 345566666654421100000
Q ss_pred -CCCcccc-----cccccccCCc------ceeEEEEeCceEEEEEecchhhHHHHHHHHHhccC
Q 002219 286 -GEGRVSL-----ATEVKERNPL------RHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDAGL 337 (952)
Q Consensus 286 -~~~~~~~-----~~~~~~~~~~------~~~~~i~~~~r~l~l~~~s~~~~~~w~~~i~~~~~ 337 (952)
.+..... +....+..+. .+.|+|....|++.|.|.|.....+|+.+|..+..
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~F~I~t~~rt~yl~A~s~~E~~eWi~aI~~~i~ 132 (169)
T 1btk_A 69 EKNPPPERQIPRRGEESSEMEQISIIERFPYPFQVVYDEGPLYVFSPTEELRKRWIHQLKNVIR 132 (169)
T ss_dssp CSSCCGGGCC---------CCTTHHHHCCCEEEEEEETTCCEEEEESCHHHHHHHHHHHHHHHT
T ss_pred CCCcchhcccccccCcccccccccccccccccEEEEeCCceEEEEcCCHHHHHHHHHHHHHHHH
Confidence 0000000 0000000011 17899999999999999999999999999998763
No 63
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A
Probab=98.24 E-value=4e-06 Score=83.32 Aligned_cols=105 Identities=14% Similarity=0.234 Sum_probs=65.7
Q ss_pred cceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCCeEEEEeCCCC--CCccEEEEEeCCCCCCCCCCCc
Q 002219 212 LKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFD--TKPMDIIVFDVLPASDGNGEGR 289 (952)
Q Consensus 212 gKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdSfL~yv~d~~~--~~~~~v~l~D~~~~~~~~~~~~ 289 (952)
-|||||.+++.....| ... + . ....|++|||||+++.|.|+++..+ ..+..++.++.. ...
T Consensus 4 ~~eG~L~~k~~~~~~g-kK~------g--~-~~k~WkkRwfvL~~~~L~yyk~~~~~~~~~~g~i~l~~~-------~~~ 66 (168)
T 2j59_M 4 AKEGWLHFRPLVTDKG-KRV------G--G-SIRPWKQMYVVLRGHSLYLYKDKREQTTPSEEEQPISVN-------ACL 66 (168)
T ss_dssp CEEEEEEEEECC----------------------CCEEEEEEEETTEEEEESCTTCC--------CEECS-------SCE
T ss_pred cEEEEEeeeeecccCC-ccc------C--C-CCCCceEEEEEEeCCEEEEEECCcccccccCCceEeccc-------ceE
Confidence 5899999775221111 000 0 0 1157999999999999999998754 455555544431 011
Q ss_pred ccccccccccCCcceeEEEEeCceEEEEEecchhhHHHHHHHHHhcc
Q 002219 290 VSLATEVKERNPLRHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~i~~~~r~l~l~~~s~~~~~~w~~~i~~~~ 336 (952)
+.+.. +.....+.|.|....|.+.|.|.+...+.+|+.+|..+.
T Consensus 67 ~~~~~---~~~~~~~~F~I~t~~r~~~l~A~s~~e~~~Wi~ai~~~~ 110 (168)
T 2j59_M 67 IDISY---SETKRKNVFRLTTSDCECLFQAEDRDDMLAWIKTIQESS 110 (168)
T ss_dssp EEECS---SSCSCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHC
T ss_pred EEecc---ccCCCCCEEEEEeCCceEEEEcCCHHHHHHHHHHHHHHH
Confidence 11111 123456899999999999999999999999999999976
No 64
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A
Probab=98.23 E-value=5.7e-06 Score=78.84 Aligned_cols=95 Identities=13% Similarity=0.231 Sum_probs=66.6
Q ss_pred CcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCCeEEEEeCCC---CCCccEEEEEeCCCCCCCCCC
Q 002219 211 KLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPF---DTKPMDIIVFDVLPASDGNGE 287 (952)
Q Consensus 211 KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdSfL~yv~d~~---~~~~~~v~l~D~~~~~~~~~~ 287 (952)
--|||||.|+.. . ...|++|||||++++|.|+++.+ +..|..+|.+..
T Consensus 6 ~~k~G~L~Kk~~----------------~----~k~W~~rwfVL~~~~L~yyK~~~~~~d~~P~gsI~L~~--------- 56 (120)
T 4a6h_A 6 EIKSGFLERRSK----------------F----LKSYSKGYYVLTPNFLHEFKTADRKKDLVPVMSLALSE--------- 56 (120)
T ss_dssp CSEEEEEEEEET----------------T----TTEEEEEEEEECSSEEEEESSCCTTTCCSCSEEEEGGG---------
T ss_pred ccEEEEEEEcCC----------------C----CCCCccEEEEEeCCEEEEEcCCCcCcCCCceEEEECCC---------
Confidence 359999999841 0 14699999999999999998765 455888887742
Q ss_pred Cccccccccccc-------CCcceeEEEEeCc-------eEEEEEecchhhHHHHHHHHHhcc
Q 002219 288 GRVSLATEVKER-------NPLRHAFKVTCGV-------RSIRLRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 288 ~~~~~~~~~~~~-------~~~~~~~~i~~~~-------r~l~l~~~s~~~~~~w~~~i~~~~ 336 (952)
..|.... .+. .+..+.|.|.... +.+.|+|.|...+.+|+.+|..+.
T Consensus 57 c~v~~~~--~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~~~y~f~A~s~~e~~~Wv~aI~~~~ 117 (120)
T 4a6h_A 57 CTVTEHS--RKNSTSSPNSTGSDAKFVLHAKQNGIIRRGHNWVFKADSYESMMSWFDNLKILT 117 (120)
T ss_dssp EEEEEEC--CCCC---------CCEEEEEESSSSSSCTTCEEEEECSSHHHHHHHHHHHHHHC
T ss_pred CEEEEcc--cccccccccccCCCcEEEEEeCCCCcccCceEEEEEcCCHHHHHHHHHHHHHHh
Confidence 1221110 000 0134567666543 699999999999999999999864
No 65
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A
Probab=98.21 E-value=3.3e-06 Score=87.94 Aligned_cols=104 Identities=13% Similarity=0.260 Sum_probs=75.1
Q ss_pred CCCCcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCCeEEEEeCCCCCCccEEEEEeCCCCCCCCCC
Q 002219 208 YGPKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGE 287 (952)
Q Consensus 208 ~G~KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdSfL~yv~d~~~~~~~~v~l~D~~~~~~~~~~ 287 (952)
++.--|+|||.|+.... +.+ ...|++|||||+++.|.|++++.+.++..+|-++..
T Consensus 103 l~~v~k~G~L~Kkg~~~-------------~~~---~k~WkkRwfVL~~~~L~Yyk~~~~~~p~g~I~L~~~-------- 158 (211)
T 1u5e_A 103 LPFVIKAGYLEKRRKDH-------------SFL---GFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGY-------- 158 (211)
T ss_dssp CSSEEEEEEEEEEEHHH-------------HTT---TCCCEEEEEEEETTEEEEESSTTCSSCSEEEECTTC--------
T ss_pred cCCccEEEEEEEECCCC-------------CcC---CCCcEeEEEEEECCEEEEEcCCCCccceEEEEeCCc--------
Confidence 34557999999984200 001 157999999999999999999888888888877531
Q ss_pred CcccccccccccCCcceeEEEEeCc-eEEEEEecchhhHHHHHHHHHhcc
Q 002219 288 GRVSLATEVKERNPLRHAFKVTCGV-RSIRLRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~i~~~~-r~l~l~~~s~~~~~~w~~~i~~~~ 336 (952)
.+.............+.|.|.... |.+.|.|.+...+.+|+.+|+.+.
T Consensus 159 -~~v~~~~~~~~~~k~~~F~I~t~~~r~~~l~A~s~~e~~~Wi~aL~~ai 207 (211)
T 1u5e_A 159 -DVRMNNTLRKDGKKDCCFEICAPDKRIYQFTAASPKDAEEWVQQLKFIL 207 (211)
T ss_dssp -EEEECGGGCSSTTGGGEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred -EEEEcCCccccCCCCCEEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHH
Confidence 111110000122345899999875 999999999999999999999865
No 66
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=98.20 E-value=7.3e-06 Score=76.57 Aligned_cols=82 Identities=20% Similarity=0.350 Sum_probs=59.7
Q ss_pred CCcceEEEEEeCCeEEEEeCCCCCCccEEEEEeCCCCCCCCCCCcccccccccccCCcceeEEEEeC-ceEEEEEecchh
Q 002219 245 DNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGRVSLATEVKERNPLRHAFKVTCG-VRSIRLRTRTGA 323 (952)
Q Consensus 245 ~rw~kRWfvVKdSfL~yv~d~~~~~~~~v~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~r~l~l~~~s~~ 323 (952)
..|++|||||+++.|.|+++..+..+..++-+.. ..+.... ..+....+|.|.|... .+.+.+.+.|..
T Consensus 18 k~Wk~rwfvL~~~~L~~yk~~~~~~p~~~i~l~~---------~~~~~~~-~~~~~~r~~~F~l~~~~~~~y~f~A~s~e 87 (112)
T 3cxb_B 18 EHWKTCFVVLSNGILYQYPDRTDVIPLLSVNMGG---------EQCGGCR-RANTTDRPHAFQVILSDRPCLELSAESEA 87 (112)
T ss_dssp CCCEEEEEEEETTEEEEESSSSCCSCSEEEETTC----------CEEEEE-ECCCSSCTTEEEEEETTSCCEEEECSSHH
T ss_pred CCceEEEEEEECCEEEEECCCCCCCccceEEecC---------CEEEeee-ccCCCCCCeEEEEEcCCCCEEEEEcCCHH
Confidence 6799999999999999999887777766542211 1111000 0122345689999854 779999999999
Q ss_pred hHHHHHHHHHhcc
Q 002219 324 KVRDWVAAINDAG 336 (952)
Q Consensus 324 ~~~~w~~~i~~~~ 336 (952)
.+.+|+.+|..+.
T Consensus 88 e~~~Wi~ai~~~~ 100 (112)
T 3cxb_B 88 EMAEWMQHLCQAV 100 (112)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999876
No 67
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.20 E-value=3.3e-06 Score=79.24 Aligned_cols=92 Identities=21% Similarity=0.342 Sum_probs=68.9
Q ss_pred CCcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEe--CCeEEEEeCCCCC--CccEEEEEeCCCCCCCC
Q 002219 210 PKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLK--PGFLALLADPFDT--KPMDIIVFDVLPASDGN 285 (952)
Q Consensus 210 ~KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVK--dSfL~yv~d~~~~--~~~~v~l~D~~~~~~~~ 285 (952)
..-+||||.|+.. . ...|++|||||+ ++.|.|++++.+. ++..+|-++.
T Consensus 7 ~~~~~G~L~K~~~----------------~----~~~Wk~R~fvL~~~~~~L~Yyk~~~~~~~~~~g~I~L~~------- 59 (120)
T 2d9x_A 7 GENVYGYLMKYTN----------------L----VTGWQYRFFVLNNEAGLLEYFVNEQSRNQKPRGTLQLAG------- 59 (120)
T ss_dssp CCCCEEEEEEEEE----------------T----TTEEEEEEEEECTTTCEEEEESSGGGSSSCCSEEEECTT-------
T ss_pred CCcEEEEEEecCC----------------C----CCCceEEEEEEECCCCEEEEEecCcccCCCccceEEcce-------
Confidence 4569999998731 0 146999999999 6899999877653 6777776653
Q ss_pred CCCcccccccccccCCcceeEEEEeCc-eEEEEEecchhhHHHHHHHHHhcc
Q 002219 286 GEGRVSLATEVKERNPLRHAFKVTCGV-RSIRLRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~i~~~~-r~l~l~~~s~~~~~~w~~~i~~~~ 336 (952)
..+.. .....+.|.|.... |.+.|.|.+...+.+|+.+|..+.
T Consensus 60 --~~v~~------~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~~~ 103 (120)
T 2d9x_A 60 --AVISP------SDEDSHTFTVNAASGEQYKLRATDAKERQHWVSRLQICT 103 (120)
T ss_dssp --CCEEC------CSSSSSCEEECCSSSCCEEECCSSHHHHHHHHHHHHHHH
T ss_pred --EEEEe------cCCCCCEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHH
Confidence 11221 11235789998875 999999999999999999998765
No 68
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}
Probab=98.19 E-value=2.6e-06 Score=80.96 Aligned_cols=100 Identities=17% Similarity=0.251 Sum_probs=67.9
Q ss_pred CcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCCeEEEEeCCCC---CCccEEEEEeCCCCCCCCCC
Q 002219 211 KLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFD---TKPMDIIVFDVLPASDGNGE 287 (952)
Q Consensus 211 KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdSfL~yv~d~~~---~~~~~v~l~D~~~~~~~~~~ 287 (952)
--++|||.|+.. | .. ...|++|||||++++|.|++++.+ ..+..+|-+..-..
T Consensus 5 v~~~G~L~K~~~----~----------~~----~~~WkrRwfvL~~~~L~yyk~~~d~~~~~p~g~I~L~~~~~------ 60 (134)
T 2y7b_A 5 VEERGFLTIFED----V----------SG----FGAWHRRWCVLSGNCISYWTYPDDEKRKNPIGRINLANCTS------ 60 (134)
T ss_dssp CCEEEEEEEEEE----E----------TT----EEEEEEEEEEEETTEEEEESSHHHHTTSCCSEEEEGGGBCS------
T ss_pred ceEEeeEEEEcC----C----------CC----CCCcEEEEEEEECCEEEEECCCCcccccCceEEEEhhhCcc------
Confidence 459999998831 1 00 147999999999999999986654 67888876653110
Q ss_pred CcccccccccccCCcceeEEEEeC--------------------ceEEEEEecchhhHHHHHHHHHhcc
Q 002219 288 GRVSLATEVKERNPLRHAFKVTCG--------------------VRSIRLRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~i~~~--------------------~r~l~l~~~s~~~~~~w~~~i~~~~ 336 (952)
..+.... .+.....+.|.|.+. .|.+.|.|.+...+..|+.+|..+.
T Consensus 61 ~~v~~~~--~~~~~~~~~F~i~~~~p~~~~~~~~~~~~~~~~~~~r~~~l~A~s~~e~~~Wi~al~~~i 127 (134)
T 2y7b_A 61 RQIEPAN--REFCARRNTFELITVRPQREDDRETLVSQCRDTLCVTKNWLSADTKEERDLWMQKLNQVL 127 (134)
T ss_dssp SSCEECC--TTTCCCTTEEEEEEEEECCTTCCCCSSEEEETTEEEEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred ccccccc--hhhccCCCEEEEEecCCCcccccccccccccCCCceEEEEEECCCHHHHHHHHHHHHHHH
Confidence 0011110 011234577888651 2579999999999999999998764
No 69
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.19 E-value=7.9e-06 Score=77.01 Aligned_cols=82 Identities=21% Similarity=0.392 Sum_probs=63.5
Q ss_pred CCcceEEEEEeCC---eEEEEeCCCCCCccEEEEEeCCCCCCCCCCCcccccccccccCCcceeEEEEeCceEEEEEecc
Q 002219 245 DNWQKVWAVLKPG---FLALLADPFDTKPMDIIVFDVLPASDGNGEGRVSLATEVKERNPLRHAFKVTCGVRSIRLRTRT 321 (952)
Q Consensus 245 ~rw~kRWfvVKdS---fL~yv~d~~~~~~~~v~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~r~l~l~~~s 321 (952)
..|+||||||+++ .|.|++++.+.++...|.+.. ..|..... .+.....|.|+|...++...|.|.|
T Consensus 21 ~~WkkrWfVL~~~~~~~Ly~Yk~~~d~~p~g~I~L~g---------~~V~~~~~-~~~~~~~~~Fki~~~~~~y~f~A~s 90 (112)
T 2coc_A 21 ETWSEVWAAIPMSDPQVLHLQGGSQDGRLPRTIPLPS---------CKLSVPDP-EERLDSGHVWKLQWAKQSWYLSASS 90 (112)
T ss_dssp SCEEEEEEECCTTCTTCEEEECCTTCSSSCSEECGGG---------CEEECCCS-SSCCSSSEEEEEEETTEEEEEEESS
T ss_pred CCceEEEEEEECCCccEEEEECCCCccCcceEEEcCC---------CEEEecCc-ccccCCCCEEEEecCCeEEEEEcCC
Confidence 4699999999985 677788888888888887653 23332111 1122357899999999999999999
Q ss_pred hhhHHHHHHHHHhcc
Q 002219 322 GAKVRDWVAAINDAG 336 (952)
Q Consensus 322 ~~~~~~w~~~i~~~~ 336 (952)
...+.+|+.+|..+.
T Consensus 91 ~e~~~~Wl~al~~A~ 105 (112)
T 2coc_A 91 AELQQQWLETLSTAA 105 (112)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999976
No 70
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.18 E-value=7.2e-06 Score=79.73 Aligned_cols=101 Identities=15% Similarity=0.220 Sum_probs=72.5
Q ss_pred CCCcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCC-----eEEEEeCCC-CCCccEEEEEeCCCCC
Q 002219 209 GPKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPG-----FLALLADPF-DTKPMDIIVFDVLPAS 282 (952)
Q Consensus 209 G~KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdS-----fL~yv~d~~-~~~~~~v~l~D~~~~~ 282 (952)
+.--|||||.|+...+ . .+. ....|++|||||+++ .|.|+++.. +..+..+|.++.-
T Consensus 16 ~~~~~~G~L~K~~~~~------~-------~~~-~~k~Wk~RwfvL~~~~~g~~~L~yy~~~~~~~~~~g~I~L~~~--- 78 (150)
T 1wg7_A 16 GGITKHGWLYKGNMNS------A-------ISV-TMRSFKRRFFHLIQLGDGSYNLNFYKDEKISKEPKGSIFLDSC--- 78 (150)
T ss_dssp CCCCCEEEEEECCCCS------S-------HHH-HHSSCEEEEEEEEECSSSCEEEEEESSSCCSSCCSEEECTTTC---
T ss_pred CCeeEEEEEEEecCCc------c-------ccc-cccCeeEEEEEEecCCCCceEEEEECCCCCCCCcCcEEecccC---
Confidence 5567999999873110 0 000 125799999999998 999998876 6778887766531
Q ss_pred CCCCCCcccccccccccCCcceeEEEEeCc-eEEEEEecchhhHHHHHHHHHhcc
Q 002219 283 DGNGEGRVSLATEVKERNPLRHAFKVTCGV-RSIRLRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-r~l~l~~~s~~~~~~w~~~i~~~~ 336 (952)
.+... ......+.|.|.... |.+.|.|.+...+.+|+.+|..+.
T Consensus 79 ------~~~~~----~~~~~~~~F~i~~~~~r~~~l~A~s~~e~~~Wi~al~~ai 123 (150)
T 1wg7_A 79 ------MGVVQ----NNKVRRFAFELKMQDKSSYLLAADSEVEMEEWITILNKIL 123 (150)
T ss_dssp ------CEECC----CCSSCTTEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred ------EEEec----CCCCCceEEEEEeCCCcEEEEEeCCHHHHHHHHHHHHHHH
Confidence 11110 112346889999885 999999999999999999998764
No 71
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A
Probab=98.17 E-value=1.8e-06 Score=81.36 Aligned_cols=97 Identities=16% Similarity=0.300 Sum_probs=63.2
Q ss_pred CcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEe-CCeEEEEeCCCCCCccEEEEEeCCCCCCCCCCCc
Q 002219 211 KLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLK-PGFLALLADPFDTKPMDIIVFDVLPASDGNGEGR 289 (952)
Q Consensus 211 KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVK-dSfL~yv~d~~~~~~~~v~l~D~~~~~~~~~~~~ 289 (952)
--|||||.|+. + . ...|++|||||+ ++.|.|+++..+..+..++-++.. .. ..
T Consensus 8 ~~~~G~L~K~g-----~-----------~----~k~WkkRwfvL~~~~~L~yy~~~~~~~~~g~i~L~~~---~~---~~ 61 (125)
T 1unq_A 8 IVKEGWLHKRG-----E-----------Y----IKTWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNF---SV---AQ 61 (125)
T ss_dssp EEEEEEEEEEC-----S-----------S----SCCEEEEEEEEETTSEEEEESSCCCSHHHHTSCSEEE---EC---TT
T ss_pred eeEEeeEEecc-----C-----------C----ccCccCcEEEEecCCEEEEEeCCCCCCCCceeEccce---eE---Ee
Confidence 35999999872 1 0 157999999999 579999987655433222211110 00 00
Q ss_pred ccccccccccCCcceeEEEEe----CceEEEEEecchhhHHHHHHHHHhcc
Q 002219 290 VSLATEVKERNPLRHAFKVTC----GVRSIRLRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~i~~----~~r~l~l~~~s~~~~~~w~~~i~~~~ 336 (952)
..+. .......+.|.|.+ ..|.+.|.|.+...+.+|+.+|..+.
T Consensus 62 ~~~~---~~~~~~~~~F~I~~~~~~~~~~~~~~a~s~~e~~~Wi~al~~~~ 109 (125)
T 1unq_A 62 CQLM---KTERPRPNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQTVA 109 (125)
T ss_dssp CEEE---EECSSSTTEEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred eeec---ccccCCCCEEEEEecCCCCceeEEEEeCCHHHHHHHHHHHHHHH
Confidence 0000 01123467899984 57899999999999999999998764
No 72
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A
Probab=98.15 E-value=6.6e-06 Score=74.68 Aligned_cols=101 Identities=16% Similarity=0.306 Sum_probs=63.6
Q ss_pred ceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCCeEEEEeCCCC----CCccEEEEEeCCCCCCCCCCC
Q 002219 213 KEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFD----TKPMDIIVFDVLPASDGNGEG 288 (952)
Q Consensus 213 KEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdSfL~yv~d~~~----~~~~~v~l~D~~~~~~~~~~~ 288 (952)
.||||.++......| .. . ....|++|||||+++.|.|++++.+ ..+...+.+|.. ..
T Consensus 1 ~eG~L~kk~~~~~~g--k~------~----~~~~Wk~rwfvL~~~~L~yyk~~~~~~~~~~~~~~~~i~l~-------~~ 61 (106)
T 1btn_A 1 MEGFLNRKHEWEAHN--KK------A----SSRSWHNVYCVINNQEMGFYKDAKSAASGIPYHSEVPVSLK-------EA 61 (106)
T ss_dssp CEEEEEEEEEECSTT--CB------C----SCCCCEEEEEEEETTEEEEESSHHHHHHTCCSSSCCCEECT-------TC
T ss_pred CccEEEEEEEEeCCC--cc------C----CCCChhEEEEEEECCEEEEEeCCcccccCCCCCCcceEECC-------CC
Confidence 489999985211111 00 0 1157999999999999999987652 111111122211 01
Q ss_pred cccccccccccCCcceeEEEEeCc-eEEEEEecchhhHHHHHHHHHhc
Q 002219 289 RVSLATEVKERNPLRHAFKVTCGV-RSIRLRTRTGAKVRDWVAAINDA 335 (952)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~i~~~~-r~l~l~~~s~~~~~~w~~~i~~~ 335 (952)
.+.++. +....++.|.|.... |.+.|.|.|...+.+|+.+|..+
T Consensus 62 ~~~~~~---~~~~~~~~F~i~~~~~~~~~~~A~s~~e~~~Wi~ai~~A 106 (106)
T 1btn_A 62 ICEVAL---DYKKKKHVFKLRLSDGNEYLFQAKDDEEMNTWIQAISSA 106 (106)
T ss_dssp EEEECS---SCCSSSSEEEEECTTSCEEEEECSSHHHHHHHHHHHHHC
T ss_pred EEEEcc---cccCCccEEEEEecCCCEEEEECCCHHHHHHHHHHHhcC
Confidence 111111 123346899998654 99999999999999999999863
No 73
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.15 E-value=7.3e-06 Score=77.32 Aligned_cols=105 Identities=20% Similarity=0.314 Sum_probs=70.5
Q ss_pred CCCcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEe--CCeEEEEeCC-CCCCccEEEEEeCCCCCCCC
Q 002219 209 GPKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLK--PGFLALLADP-FDTKPMDIIVFDVLPASDGN 285 (952)
Q Consensus 209 G~KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVK--dSfL~yv~d~-~~~~~~~v~l~D~~~~~~~~ 285 (952)
+.--|||||.|+. + . ...|++|||||+ .++|.|++++ .+.++..+|-++.-......
T Consensus 16 ~~~~~~G~L~K~g-----~----------~-----~~~Wk~R~fvL~~d~~~L~yy~~~~~~~~~~g~i~L~~~~v~~~~ 75 (129)
T 1x1g_A 16 GTVVKQGYLAKQG-----H----------K-----RKNWKVRRFVLRKDPAFLHYYDPSKEENRPVGGFSLRGSLVSALE 75 (129)
T ss_dssp SEEEEEEEEEEEC-----S----------S-----SSSEEEEEEEEEESSCEEEEECSSSCCSSCSCCEESTTCCCEECC
T ss_pred CCEEEEEEEEEEC-----C----------C-----CCCeeeEEEEEeCCCCeEEEeCCCCcCCccceEEECcCCEEEEeC
Confidence 3457999999872 1 0 157999999999 3799999887 66777777766531000000
Q ss_pred CCCcccccccccccCCcceeEEEEeCc-eEEEEEecchhhHHHHHHHHHhccC
Q 002219 286 GEGRVSLATEVKERNPLRHAFKVTCGV-RSIRLRTRTGAKVRDWVAAINDAGL 337 (952)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~i~~~~-r~l~l~~~s~~~~~~w~~~i~~~~~ 337 (952)
.. ..... .......+.|.|.... |.+.|.|.+...+.+|+.+|+.+..
T Consensus 76 ~~---~~p~~-~~~~~~~~~F~I~~~~~r~~~l~a~s~~e~~~Wi~al~~~~~ 124 (129)
T 1x1g_A 76 DN---GVPTG-VKGNVQGNLFKVITKDDTHYYIQASSKAERAEWIEAIKKLTS 124 (129)
T ss_dssp SS---SSCSS-CSSCCCSSCEEECCTTCCCEEECCSSHHHHHHHHHHHHHHSS
T ss_pred CC---CCccc-ccCCCCCceEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 00 00000 0011135889998886 6799999999999999999999763
No 74
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Probab=98.13 E-value=1.1e-05 Score=77.31 Aligned_cols=101 Identities=15% Similarity=0.287 Sum_probs=68.7
Q ss_pred CCcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCCeEEEEeCCC-----------CCCccEEEEEeC
Q 002219 210 PKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPF-----------DTKPMDIIVFDV 278 (952)
Q Consensus 210 ~KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdSfL~yv~d~~-----------~~~~~~v~l~D~ 278 (952)
.-.|||||.+++.. .|| . .. . ..|++|||||+++.|.|++++. +..+..++-+..
T Consensus 11 ~~~k~G~L~kk~~~--~~G-~-------~~---~-k~Wk~rwfvL~~~~L~yykd~~~~~~~~~~~~~~~~p~g~I~L~~ 76 (129)
T 2p0d_A 11 EVEKSGLLNMTKIA--QGG-R-------KL---R-KNWGPSWVVLTGNSLVFYREPPPTAPSSGWGPAGSRPESSVDLRG 76 (129)
T ss_dssp SEEEEEEEEEEEEE--ETT-E-------EC---C-CCCEEEEEEEESSEEEEESCC--------------CCSEEEECTT
T ss_pred ceeEEEEEEEeeec--cCC-C-------cC---C-CCceEEEEEEeCCEEEEEcCcccccccccccccCCCCccEEEeCC
Confidence 44699999986421 110 0 00 1 5799999999999999999873 335665554431
Q ss_pred CCCCCCCCCCcccccccccccCCcceeEEEEeCc-eEEEEEecchhhHHHHHHHHHhcc
Q 002219 279 LPASDGNGEGRVSLATEVKERNPLRHAFKVTCGV-RSIRLRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-r~l~l~~~s~~~~~~w~~~i~~~~ 336 (952)
..+..+ .+....++.|.|.... +...|.|.|..++.+|+.+|..+.
T Consensus 77 ---------~~v~~~---~~~~kr~~~F~l~t~~~~~yl~qA~s~~e~~~Wi~aI~~~i 123 (129)
T 2p0d_A 77 ---------AALAHG---RHLSSRRNVLHIRTIPGHEFLLQSDHETELRAWHRALRTVI 123 (129)
T ss_dssp ---------CEEEEC---TTSCSSSSEEEEECTTSCEEEEECSCHHHHHHHHHHHHHHH
T ss_pred ---------cEEEEC---CCCCCCCcEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHH
Confidence 222222 1233446899998764 679999999999999999998864
No 75
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=98.12 E-value=7.5e-06 Score=86.08 Aligned_cols=101 Identities=13% Similarity=0.281 Sum_probs=75.9
Q ss_pred CCCCcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCCeEEEEeCCCCCCccEEEEEeCCCCCCCCCC
Q 002219 208 YGPKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGE 287 (952)
Q Consensus 208 ~G~KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdSfL~yv~d~~~~~~~~v~l~D~~~~~~~~~~ 287 (952)
-+.-.|||||.|+.... | . +. ...|++|||||+++.|.|++++.+..+..+|.++.-
T Consensus 55 ~~~~~k~G~L~K~g~~~--~----------~-~~--~k~WkkRwfvL~~~~L~Yyk~~~~~~~~g~I~L~~~-------- 111 (228)
T 3tfm_A 55 KQEALKQGWLHNNGGGS--S----------T-LS--RRNWKKRWFVLRQSKLMYFENDSEEKLKGTVEVRSA-------- 111 (228)
T ss_dssp CCCSSEEEEEEECGGGC--S----------S-SC--GGGCEEEEEEECSSEEEEESSTTCCSEEEEEEGGGC--------
T ss_pred CCCcceEEEEEEECCCc--C----------C-cc--cCCceEEEEEEeCCEEEEEeCCCCcceeEEEEcCCC--------
Confidence 35567999998873210 0 0 00 147999999999999999999888888888877641
Q ss_pred CcccccccccccCCcceeEEEEeCceEEEEEecchhhHHHHHHHHHhccC
Q 002219 288 GRVSLATEVKERNPLRHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDAGL 337 (952)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~i~~~~r~l~l~~~s~~~~~~w~~~i~~~~~ 337 (952)
.+ +. ......++|.|.+.+|.+.|.|.|...+.+|+.+|..+..
T Consensus 112 -~~-v~----~~~~k~~~F~I~t~~r~~~l~A~s~~e~~~Wv~aL~~~i~ 155 (228)
T 3tfm_A 112 -KE-II----DNTNKENGIDIIMADRTFHLIAESPEDASQWFSVLSQVHS 155 (228)
T ss_dssp -SE-EE----EETTTTSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred -EE-ec----cCCCCCcEEEEEcCCcEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 11 11 1223468999999999999999999999999999998764
No 76
>2wwe_A Phosphoinositide-3-kinase, class 2, gamma polypeptide; phosphoprotein, nucleotide-binding, PIK3C2G, membrane, PX-domain, transferase, ATP-binding; 1.25A {Homo sapiens}
Probab=98.08 E-value=6.7e-06 Score=78.73 Aligned_cols=104 Identities=21% Similarity=0.247 Sum_probs=70.8
Q ss_pred ccCCCCC--eEEEeeeeecCCCCCCcceeEEEEEEEec-ceEEEEEEehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 002219 38 RIFDELP--KASIVSVSRPDAGDISPMLLSYTIEVQYK-QFKWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEWLQ 114 (952)
Q Consensus 38 ~~~~~~p--~v~I~~~er~~s~~~~~~~~~Y~Iel~~g-~~~W~v~r~~~~f~~Lh~~lk~~~~~~~~~~~~~~~~~~~~ 114 (952)
.+|...+ +|.|.+.... + ...|.|+|+.- .=.|.|.|+|++|..||.+||+
T Consensus 18 ~~~~~~~i~~~~v~~~~k~-~------~~~Yvi~V~~sd~~~~~~~rry~eF~~LH~qLkk------------------- 71 (127)
T 2wwe_A 18 LYFQSMSIERATILGFSKK-S------SNLYLIQVTHSNNETSLTEKSFEQFSKLHSQLQK------------------- 71 (127)
T ss_dssp CCSCSSSEEEEEEEEEETT-E------EEEEEEEEEETTSCEEEEEECHHHHHHHHHHHHH-------------------
T ss_pred eeecCCcEEEEEEEEEEec-c------cEEEEEEEEEeCCCeEEEEEEHHHHHHHHHHHHH-------------------
Confidence 4444433 7888888533 2 45799999998 5699999999999999999985
Q ss_pred hcCCCCCccccccCccccccccccccccccCCCCCCCCCCCCCCccccCCCcchHHHHHHHHHHHHHHh-ccccccchhh
Q 002219 115 NLGMGDHMAVVQEDDEGDEIAVNHDESSKKRDVPANAALPVIRPALGRQHSMSDRAKVAMQQYLNHFLG-NMDIVNSREV 193 (952)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~lp~~~~~~~~~~~~~~r~~~~LE~YL~~lL~-~~~~~n~~~l 193 (952)
.+|. +..|. ||.- .-+++...-.. |+..||.||+.|+. ...+.++.-+
T Consensus 72 ~Fp~--------------------------~~LP~---fP~K-~ll~~t~~~~e-Rr~~Le~Ylq~Ll~~~~~Ia~Sd~v 120 (127)
T 2wwe_A 72 QFAS--------------------------LTLPE---FPHW-WHLPFTNSDHR-RFRDLNHYMEQILNVSHEVTNSDCV 120 (127)
T ss_dssp HTTT--------------------------SCCCC---CCCT-TSHHHHHCHHH-HHHHHHHHHHHHTTSCHHHHTSHHH
T ss_pred hCcc--------------------------ccCCC---CCCc-cccCcCHHHHH-HHHHHHHHHHHHhcCCceeecCHHH
Confidence 2221 11122 3321 11232222222 45799999999998 4778999999
Q ss_pred hheee
Q 002219 194 CKFLE 198 (952)
Q Consensus 194 ~~Fle 198 (952)
.+||+
T Consensus 121 ~~Ff~ 125 (127)
T 2wwe_A 121 LSFFL 125 (127)
T ss_dssp HHHHH
T ss_pred HHHhC
Confidence 99986
No 77
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.03 E-value=8.4e-06 Score=76.69 Aligned_cols=106 Identities=19% Similarity=0.285 Sum_probs=68.3
Q ss_pred CCCcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCCeEEEEeCCCCCC----ccEEEEEeCCCCCCC
Q 002219 209 GPKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTK----PMDIIVFDVLPASDG 284 (952)
Q Consensus 209 G~KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdSfL~yv~d~~~~~----~~~v~l~D~~~~~~~ 284 (952)
+.-.|||||.++......| . .. -...|++|||||+++.|.|++++.+.. +...+.+|..
T Consensus 6 ~~v~~eG~L~kk~~~~~~g--k-------~~---~~~~Wk~rwfvL~~~~L~yyk~~~~~~~~~~~~~~~~i~l~----- 68 (123)
T 1wjm_A 6 SGEQMEGMLCRKQEMEAFG--K-------KA---ANRSWQNVYCVLRRGSLGFYKDAKAASAGVPYHGEVPVSLA----- 68 (123)
T ss_dssp CCCCEEEEEEEEEEEEETT--E-------EC---SCCCCEEEEEEEETTEEEEESSHHHHTTTCBSSSCCCEECT-----
T ss_pred CCeEEEEEEEEEEEEeCCC--c-------cC---CCCCccEEEEEEECCEEEEEEcccccccCcccCCCceEEcc-----
Confidence 4456999999874211111 0 00 125799999999999999998764432 1111122210
Q ss_pred CCCCcccccccccccCCcceeEEEEeCc-eEEEEEecchhhHHHHHHHHHhcc
Q 002219 285 NGEGRVSLATEVKERNPLRHAFKVTCGV-RSIRLRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~-r~l~l~~~s~~~~~~w~~~i~~~~ 336 (952)
+..+..+. +....+|.|.|.... |.+.|.|.|...+.+|+.+|+.+.
T Consensus 69 --~~~~~~~~---~~~~r~~~F~i~~~~~~~~~f~A~s~~e~~~Wi~ai~~~~ 116 (123)
T 1wjm_A 69 --RAQGSVAF---DYRKRKHVFKLGLQDGKEYLFQAKDEAEMSSWLRVVNAAI 116 (123)
T ss_dssp --TCEEEECT---TCSSCSSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred --CcEEeecc---cccCCCCEEEEEEcCCcEEEEECCCHHHHHHHHHHHHHHH
Confidence 01122111 223457899998765 899999999999999999999865
No 78
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=98.00 E-value=2.2e-05 Score=88.88 Aligned_cols=103 Identities=19% Similarity=0.261 Sum_probs=73.6
Q ss_pred CCcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCCeEEEEeCCCCCCccEEEEEeCCCCCCCCCCCc
Q 002219 210 PKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGR 289 (952)
Q Consensus 210 ~KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdSfL~yv~d~~~~~~~~v~l~D~~~~~~~~~~~~ 289 (952)
.--|||||.|+.. .. ...|++|||||++..|.|++++.+..+..+|.+...... ..
T Consensus 268 ~~~k~G~L~K~g~----------------~~---~k~WKkRwFVL~~~~L~YYk~~~d~~~~G~I~L~~~~~~-----~~ 323 (386)
T 3lju_X 268 NYLKEGYMEKTGP----------------KQ---TEGFRKRWFTMDDRRLMYFKDPLDAFARGEVFIGSKESG-----YT 323 (386)
T ss_dssp CCSEEEEEEECCT----------------TS---CSCCEEEEEEEETTEEEEESSTTCSBCSEEEECCCGGGT-----CE
T ss_pred ccceeeeEEEECC----------------CC---CCCCcccEEEEECCEEEEEecCCCcccceEEEeecceee-----ee
Confidence 3469999998621 00 147999999999999999999988888888877431100 01
Q ss_pred cccccccc-ccCCcceeEEEEeCceEEEEEecchhhHHHHHHHHHhcc
Q 002219 290 VSLATEVK-ERNPLRHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 290 ~~~~~~~~-~~~~~~~~~~i~~~~r~l~l~~~s~~~~~~w~~~i~~~~ 336 (952)
+..+.... ..+...++|.|...+|++.|.|.+...+.+|+.+|..+.
T Consensus 324 v~~~~~~~~~~~~~~~~F~I~t~~rty~l~A~s~~e~~~Wi~aL~~~i 371 (386)
T 3lju_X 324 VLHGFPPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVAAFQKAV 371 (386)
T ss_dssp EEESCCTTCCSCCSCEEEEEECSSCEEEEEESSHHHHHHHHHHHHHHH
T ss_pred ecccCCccccccCCCcEEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Confidence 11001000 011125899999999999999999999999999999875
No 79
>2dyb_A Neutrophil cytosol factor 4; P40(PHOX), NADPH oxidase, oxidoreductase; HET: CAF; 3.15A {Homo sapiens}
Probab=97.98 E-value=1.3e-05 Score=89.16 Aligned_cols=114 Identities=18% Similarity=0.277 Sum_probs=75.6
Q ss_pred eEEEeeeeecCCCCCCcceeEEEEEEEe-cceEEEEEEehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcc
Q 002219 45 KASIVSVSRPDAGDISPMLLSYTIEVQY-KQFKWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEWLQNLGMGDHMA 123 (952)
Q Consensus 45 ~v~I~~~er~~s~~~~~~~~~Y~Iel~~-g~~~W~v~r~~~~f~~Lh~~lk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (952)
+|.|.+++...... .+.+|.|+++. +.-+|+|.|+|+||..||.+|+. .+|...-
T Consensus 25 ~v~I~~~~~~~~~~---~~~~Y~i~v~~~~~~~~~v~RrYsdF~~Lh~~L~~-------------------~fp~e~g-- 80 (341)
T 2dyb_A 25 SANIADIEEKRGFT---SHFVFVIEVKTKGGSKYLIYRRYRQFHALQSKLEE-------------------RFGPDSK-- 80 (341)
T ss_dssp EEEEEEEEEEESSS---EEEEEEEEEEETTSCEEEEEEEHHHHHHHHHHHHH-------------------HTCC-----
T ss_pred EEEECCeEEecCCC---cEEEEEEEEEEcCCcEEEEEeehHHHHHHHHHHHH-------------------HCchhhc--
Confidence 79999987332222 36789999994 45789999999999999998873 2221000
Q ss_pred ccccCccccccccccccccccCCCCCCCCCCCCCCccccCCCcchHHHHHHHHHHHHHHhccc-cccchhhhheeeeccC
Q 002219 124 VVQEDDEGDEIAVNHDESSKKRDVPANAALPVIRPALGRQHSMSDRAKVAMQQYLNHFLGNMD-IVNSREVCKFLEASKL 202 (952)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~lp~~~~~~~~~~~~~~r~~~~LE~YL~~lL~~~~-~~n~~~l~~FlevS~~ 202 (952)
.....+.+|. ||.- ..+++...+...|+..||.||+.|+..+. +..+..+..||+.+..
T Consensus 81 ----------------~~~~~~~lp~---lP~k-~~~~~~~~~~e~R~~~Le~yl~~ll~lp~~i~~~~~v~~Ff~~~~~ 140 (341)
T 2dyb_A 81 ----------------SSALAXTLPT---LPAK-VYVGVKQEIAEMRIPALNAYMKSLLSLPVWVLMDEDVRIFFYQSPY 140 (341)
T ss_dssp ----------------------CCCC---CCCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSCHHHHTCHHHHHHHSCCHH
T ss_pred ----------------cccccccccC---CCCc-cccCccHHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHhhccc
Confidence 0011233444 5431 12333333555667899999999998776 6889999999987653
No 80
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A
Probab=97.97 E-value=1.8e-05 Score=75.14 Aligned_cols=98 Identities=11% Similarity=0.183 Sum_probs=64.5
Q ss_pred CCCCcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCCeEEEEeCCCC---------CCccEEEEEeC
Q 002219 208 YGPKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFD---------TKPMDIIVFDV 278 (952)
Q Consensus 208 ~G~KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdSfL~yv~d~~~---------~~~~~v~l~D~ 278 (952)
+..-.|||+|.|+.. . ...|++|||||+++.|.|++++.. ..+..+|-+..
T Consensus 9 ~~~~~k~G~L~K~g~----------------~----~k~Wk~RwfVL~~~~L~yyk~~~~~~~e~~plg~~~~G~I~L~~ 68 (124)
T 2w2x_D 9 KDEHKQQGELYMWDS----------------I----DQKWTRHFCAIADAKLSFSDDIEQTMEEDNPLGSLCRGILDLNT 68 (124)
T ss_dssp ----CCEEEEEEEET----------------T----TTEEEEEEEEEETTEEEEEEEHHHHHHCSSCCCCSCSEEEEGGG
T ss_pred hhhcceeEEEEEECC----------------C----CCCceEeEEEEECCEEEEEcccccccccccccCCccccEEECCC
Confidence 445579999998731 0 146999999999999999987421 12234443321
Q ss_pred CCCCCCCCCCcccccccccccCCcceeEEEEeC---ceEEEEEecchhhHHHHHHHHHhcc
Q 002219 279 LPASDGNGEGRVSLATEVKERNPLRHAFKVTCG---VRSIRLRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~---~r~l~l~~~s~~~~~~w~~~i~~~~ 336 (952)
..+.... .+.....+.|+|.+. .+.+.|.|.|...+.+|+.+|..+.
T Consensus 69 ---------~~v~~~~--~~~~~k~~~F~I~~~~~~~~~~~~~A~s~ee~~~Wi~ai~~a~ 118 (124)
T 2w2x_D 69 ---------YNVVKAP--QGKNQKSFVFILEPKQQGDPPVEFATDKVEELFEWFQSIREIT 118 (124)
T ss_dssp ---------EEEEECT--TCBTTBSEEEEEEECC--CCCEEEEECCCHHHHHHHHHHHHHH
T ss_pred ---------CEEEEcc--CCcCCCCEEEEEECCCCCCceEEEEECCHHHHHHHHHHHHHHH
Confidence 1111111 011234689999875 4679999999999999999999876
No 81
>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}
Probab=97.93 E-value=2.6e-05 Score=74.05 Aligned_cols=35 Identities=14% Similarity=0.245 Sum_probs=31.0
Q ss_pred cceeEEEEeCc-eEEEEEecchhhHHHHHHHHHhcc
Q 002219 302 LRHAFKVTCGV-RSIRLRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 302 ~~~~~~i~~~~-r~l~l~~~s~~~~~~w~~~i~~~~ 336 (952)
.++.|.|.... |++.|.|.|......|+.+|..+.
T Consensus 88 ~~~~F~I~t~~~r~~~l~A~s~~e~~~Wi~ai~~~i 123 (128)
T 2rlo_A 88 ENFEFLIVSSTGQTWHFEAASFEERDAWVQAIESQI 123 (128)
T ss_dssp CCCCEEEECTTSCEEEEEESSHHHHHHHHHHHHHHH
T ss_pred CCceEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHH
Confidence 46789998887 999999999999999999998753
No 82
>3dyt_A Sorting nexin-9; 3-helix bundle, BAR domain, PX domain, phosphoprotein, protein transport, SH3 domain, transport, transport protein; 2.08A {Homo sapiens} PDB: 3dyu_A 2raj_A 2rai_A 2rak_A*
Probab=97.86 E-value=2.3e-05 Score=88.18 Aligned_cols=103 Identities=13% Similarity=0.156 Sum_probs=70.4
Q ss_pred eEEEeeeeecC--CCCCCcceeEEEEEEEecceEEEEEEehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCCCC
Q 002219 45 KASIVSVSRPD--AGDISPMLLSYTIEVQYKQFKWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEWLQN-LGMGDH 121 (952)
Q Consensus 45 ~v~I~~~er~~--s~~~~~~~~~Y~Iel~~g~~~W~v~r~~~~f~~Lh~~lk~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 121 (952)
.|.|.+-++.. .+. ..+++|+|.++. -.|+|.|||+||..||.+|+.. + .. +.+|+
T Consensus 22 ~i~V~dp~k~~~~~g~--~~y~~Y~I~~~~--~~~~V~RRYsdF~~L~~~L~~~------------~----p~~~~iP~- 80 (366)
T 3dyt_A 22 DCVVADPRKGSKMYGL--KSYIEYQLTPTN--TNRSVNHRYKHFDWLYERLLVK------------F----GSAIPIPS- 80 (366)
T ss_dssp CEEEECGGGSSSCCCC--CSSCEEEEEETT--CSCCEEEEHHHHHHHHHHHHHH------------H----TTTSCCCC-
T ss_pred EEEEcCceeecCCCCC--cCeEEEEEEEec--CcEEEEeeHHHHHHHHHHHHHh------------C----CCcCcCCC-
Confidence 78888877654 222 258899999875 3799999999999999988730 1 11 22221
Q ss_pred ccccccCccccccccccccccccCCCCCCCCCCCCCCcccc-CCCcchHHHHHHHHHHHHHHhccccccchhhhheeeec
Q 002219 122 MAVVQEDDEGDEIAVNHDESSKKRDVPANAALPVIRPALGR-QHSMSDRAKVAMQQYLNHFLGNMDIVNSREVCKFLEAS 200 (952)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~lp~~~~~~~~-~~~~~~r~~~~LE~YL~~lL~~~~~~n~~~l~~FlevS 200 (952)
||.- ..+++ .+.+-..|+..||.||+.++..+.++++..+..||+.+
T Consensus 81 -------------------------------lP~K-~~~g~~~~~fie~Rr~~Le~fL~~i~~~p~l~~~~~~~~FL~~~ 128 (366)
T 3dyt_A 81 -------------------------------LPDK-QVTGRFEEEFIKMRMERLQAWMTRMCRHPVISESEVFQQFLNFR 128 (366)
T ss_dssp -------------------------------CC------------CHHHHHHHHHHHHHHHHTCTTGGGSHHHHHHHHCS
T ss_pred -------------------------------CcCC-cccCCCCHHHHHHHHHHHHHHHHHHhCCHhhhCCcHHHHhhCCC
Confidence 2211 01221 23344455679999999999999999999999999985
No 83
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*
Probab=97.86 E-value=4.8e-05 Score=84.94 Aligned_cols=93 Identities=16% Similarity=0.316 Sum_probs=69.2
Q ss_pred CcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCCeEEEEeCCCCCCccEEEEEeCCCCCCCCCCCcc
Q 002219 211 KLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGRV 290 (952)
Q Consensus 211 KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdSfL~yv~d~~~~~~~~v~l~D~~~~~~~~~~~~~ 290 (952)
.-|||||.|+. | . ...|++|||||+++.|.|++++.+..+..+|.++.- .+
T Consensus 213 ~~k~G~L~K~g-----~----------~-----~k~WkkRwFVL~~~~L~Yyk~~~~~~p~G~I~L~~~---------~v 263 (347)
T 2r09_A 213 PDREGWLLKLG-----G----------R-----VKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENL---------SI 263 (347)
T ss_dssp CCEEEEEEEEC-----S----------S-----SCCEEEEEEEEETTEEEEESSTTCSSCSEEEECTTC---------EE
T ss_pred cccCCeeEecC-----C----------C-----cccceeEEEEEcCCEEEEEcCCCccCCcEEEEcCCe---------EE
Confidence 46999999872 1 0 157999999999999999999888888888876531 11
Q ss_pred cccccccccCCcceeEEEEeC----------------------ceEEEEEecchhhHHHHHHHHHhcc
Q 002219 291 SLATEVKERNPLRHAFKVTCG----------------------VRSIRLRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 291 ~~~~~~~~~~~~~~~~~i~~~----------------------~r~l~l~~~s~~~~~~w~~~i~~~~ 336 (952)
... +.....+.|.|... .|.+.|.|.|...+.+|+.+|+.+.
T Consensus 264 ~~~----~~~~~~~~F~I~~~~~~~~~~~~~k~~~~g~~v~~~~r~y~l~A~s~ee~~~Wi~aI~~ai 327 (347)
T 2r09_A 264 REV----EDPRKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASI 327 (347)
T ss_dssp EEE----CCSSCSSEEEEECSSSTTCCCCCEEECTTSCEEECCCSCEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEc----cCCCCCCEEEEEeCCccccccccccccccccccccCceEEEEECCCHHHHHHHHHHHHHHH
Confidence 110 11233456666543 5899999999999999999999875
No 84
>4akv_A Sorting nexin-33; transport protein, organelle biogenesis; 2.65A {Homo sapiens}
Probab=97.86 E-value=1.9e-05 Score=89.43 Aligned_cols=107 Identities=16% Similarity=0.262 Sum_probs=67.6
Q ss_pred CCC-eEEEeeeeecC--CCCCCcceeEEEEEEEecceEEEEEEehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 002219 42 ELP-KASIVSVSRPD--AGDISPMLLSYTIEVQYKQFKWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEWLQNLGM 118 (952)
Q Consensus 42 ~~p-~v~I~~~er~~--s~~~~~~~~~Y~Iel~~g~~~W~v~r~~~~f~~Lh~~lk~~~~~~~~~~~~~~~~~~~~~~~~ 118 (952)
..| .|.|.+-+... ++. ..+++|+|.++.. .|+|.|||+||..||.+|... + ..+.+
T Consensus 39 ~~~~~i~V~dp~k~~~~~g~--~~y~~Y~I~~~~~--~~~V~RRYsdF~~L~~~L~~~------------~----p~~~i 98 (386)
T 4akv_A 39 PHPFACSVEDPTKQTKFKGI--KSYISYKLTPTHA--ASPVYRRYKHFDWLYNRLLHK------------F----TVISV 98 (386)
T ss_dssp SSCCCEEEECC--------------CCEEEEETTS--SSCEEECHHHHHHHHHHHHHH------------C----SSSCC
T ss_pred CCCeEEEEcCceEecCCCCC--cCeEEEEEEEEeC--CeEEEcCHHHHHHHHHHHHHh------------C----CCCCC
Confidence 344 78888877654 222 2588999998754 699999999999999988730 0 11111
Q ss_pred CCCccccccCccccccccccccccccCCCCCCCCCCCCCCcccc-CCCcchHHHHHHHHHHHHHHhccccccchhhhhee
Q 002219 119 GDHMAVVQEDDEGDEIAVNHDESSKKRDVPANAALPVIRPALGR-QHSMSDRAKVAMQQYLNHFLGNMDIVNSREVCKFL 197 (952)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~lp~~~~~~~~-~~~~~~r~~~~LE~YL~~lL~~~~~~n~~~l~~Fl 197 (952)
|. ||.- ..+++ .+.+-..||..||.||+.++..+.++++..+..||
T Consensus 99 -----------------------------P~---lP~K-~~~g~~~~~fie~Rr~~Le~fL~~i~~~p~l~~s~~~~~FL 145 (386)
T 4akv_A 99 -----------------------------PH---LPEK-QATGRFEEDFIEKRKRRLILWMDHMTSHPVLSQYEGFQHFL 145 (386)
T ss_dssp -----------------------------CC---CCCC-C------CCTTTHHHHHHHHHHHHHHTCTTGGGCHHHHHHH
T ss_pred -----------------------------CC---CCCC-cccCCCCHHHHHHHHHHHHHHHHHHhCCHhhhCCcHHHHHh
Confidence 11 3321 11121 23333445679999999999999999999999999
Q ss_pred eecc
Q 002219 198 EASK 201 (952)
Q Consensus 198 evS~ 201 (952)
+.+.
T Consensus 146 ~~~~ 149 (386)
T 4akv_A 146 SCLD 149 (386)
T ss_dssp SCCC
T ss_pred CCCC
Confidence 9863
No 85
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=97.80 E-value=3.3e-05 Score=83.16 Aligned_cols=92 Identities=13% Similarity=0.166 Sum_probs=70.1
Q ss_pred CCCcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCC-------eEEEEeCCCC-----CCccEEEEE
Q 002219 209 GPKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPG-------FLALLADPFD-----TKPMDIIVF 276 (952)
Q Consensus 209 G~KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdS-------fL~yv~d~~~-----~~~~~v~l~ 276 (952)
+.--|||||.|+ ..|+||||||++. .|.|+++..+ .++..+|-+
T Consensus 8 ~~v~k~G~L~K~------------------------K~WkkRwFVL~~~~~~G~~~~L~YYk~~~~~~~~~~~p~g~I~L 63 (264)
T 1qqg_A 8 SDVRKVGYLRKP------------------------KSMHKRFFVLRAASEAGGPARLEYYENEKKWRHKSSAPKRSIPL 63 (264)
T ss_dssp -CEEEEEEEECT------------------------TTCCEEEEEEECCBTTTBSSEEEEESSHHHHHTTCSCCSEEEEG
T ss_pred CCccEEEEEEEC------------------------CCCEeEEEEEECCCCCCCCCEEEEECCCccccccccCcceEEEe
Confidence 344699999764 2599999999999 9999998765 578888766
Q ss_pred eCCCCCCCCCCCcccccccccccCCcceeEEEEeCceEEEEEecchhhHHHHHHHHHhcc
Q 002219 277 DVLPASDGNGEGRVSLATEVKERNPLRHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 277 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~r~l~l~~~s~~~~~~w~~~i~~~~ 336 (952)
+.-. .|... ......+.|.|.+..|.+.|.|.|...+.+|+.+|..+.
T Consensus 64 ~~~~--------~V~~~----~~~~~~~~F~I~t~~rty~l~A~se~e~~~Wi~aL~~~~ 111 (264)
T 1qqg_A 64 ESCF--------NINKR----ADSKNKHLVALYTRDEHFAIAADSEAEQDSWYQALLQLH 111 (264)
T ss_dssp GGEE--------EEEEE----CCSSCSSEEEEEESSCEEEEECSSHHHHHHHHHHHHHHC
T ss_pred eceE--------EEEec----cCCCCCcEEEEEECCEEEEEEeCCHHHHHHHHHHHHHHH
Confidence 5311 11110 112346899999999999999999999999999999976
No 86
>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}
Probab=97.80 E-value=5e-05 Score=81.53 Aligned_cols=101 Identities=15% Similarity=0.192 Sum_probs=70.6
Q ss_pred CCcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCCeEEEEeCCCCCCccEEEEEeCCCCCCCCCCCc
Q 002219 210 PKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGR 289 (952)
Q Consensus 210 ~KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdSfL~yv~d~~~~~~~~v~l~D~~~~~~~~~~~~ 289 (952)
+..+||||.|+.. + ...|++|||||+++.|.|+++..+..+..++.+..... ..
T Consensus 167 ~p~~~G~L~k~~~----~----------------~k~WkkR~fvL~~~~L~yyk~~~~~~~~~~i~l~~l~~------~~ 220 (291)
T 3tca_A 167 VPELEGALYLKED----G----------------KKSWKRRYFLLRASGIYYVPKGKTKTSRDLACFIQFEN------VN 220 (291)
T ss_dssp CCCCEEEEEEECT----T----------------SSCEEEEEEEECSSEEEECCTTCCSSTTTCEEEEEGGG------CE
T ss_pred CCceEEEEEEeCC----C----------------CCCceEEEEEEeCCEEEEEecCccccccCceeecccee------EE
Confidence 4569999999831 1 04799999999999999999888877777665432110 11
Q ss_pred ccccccc--cccCCcceeEEEEeCc------eEEEEEecchhhHHHHHHHHHhcc
Q 002219 290 VSLATEV--KERNPLRHAFKVTCGV------RSIRLRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 290 ~~~~~~~--~~~~~~~~~~~i~~~~------r~l~l~~~s~~~~~~w~~~i~~~~ 336 (952)
+..+... ....+..|+|.|.... +...|.|.|......|+.+|..+.
T Consensus 221 v~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~~~~l~A~s~~e~~~Wi~air~Ak 275 (291)
T 3tca_A 221 IYYGIQCKMKYKAPTDHCFVLKHPQIQKESQYIKYLCCDDARTLSQWVMGIRIAK 275 (291)
T ss_dssp EEEECSHHHHHCCSSSCEEEEECTTCCSCCTTSEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEecCccccccCCCCCeEEEEEcCCCCCCCceEEEEECCCHHHHHHHHHHHHHHh
Confidence 1111111 1234567999997643 558899999999999999998753
No 87
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A
Probab=97.79 E-value=7.1e-05 Score=80.54 Aligned_cols=105 Identities=21% Similarity=0.299 Sum_probs=69.7
Q ss_pred CCCcceeEEEeeecC---CccCCCCCCcccccCCCccccCCcceEEEEEeCCeEEEEeCC------CCCCccEEEEEeCC
Q 002219 209 GPKLKEDYVMAKHLP---KISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADP------FDTKPMDIIVFDVL 279 (952)
Q Consensus 209 G~KgKEG~l~kr~~~---~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdSfL~yv~d~------~~~~~~~v~l~D~~ 279 (952)
|.-.|||||.+++.. +. | .....-...|++|||||+++.|.|+++. .+..+..+|-++.
T Consensus 9 ~~v~K~G~L~~k~~~~~~K~-g----------~~~~~~~K~WkrRWfVL~~~~L~yyK~~~~~~~~~~~~p~g~I~L~~- 76 (263)
T 3a8p_A 9 GVVRKAGWLFFKPLVTLQKE-R----------KLELVARRKWKQYWVTLKGCTLLFYETYGKNSTEQNSAPRCALFAED- 76 (263)
T ss_dssp -CEEEEEEEEEEEEEEEEGG-G----------EEEECTTCCCEEEEEEEETTEEEEESSCCC------CCCSEEEECTT-
T ss_pred CCeEEEEEeeecccccccCC-C----------CccCccCCCceEEEEEEcCCEEEEEecCcccccccccCccceEEcCC-
Confidence 556799999865421 11 1 0000001579999999999999999974 3445666554431
Q ss_pred CCCCCCCCCcccccccccccCCcceeEEEEe-CceEEEEEecchhhHHHHHHHHHhcc
Q 002219 280 PASDGNGEGRVSLATEVKERNPLRHAFKVTC-GVRSIRLRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~r~l~l~~~s~~~~~~w~~~i~~~~ 336 (952)
..+... .+....++.|.|.+ ..+...|.|.|...+.+|+.+|..+.
T Consensus 77 --------~~v~~~---~~~~kk~~~F~I~t~~~r~y~f~A~s~ee~~~Wi~aI~~a~ 123 (263)
T 3a8p_A 77 --------SIVQSV---PEHPKKEHVFCLSNSCGDVYLFQATSQTDLENWVTAIHSAC 123 (263)
T ss_dssp --------CEEEEC---TTCSSCSSEEEEECTTSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred --------cEEEEC---CcCCCCCCEEEEEcCCCcEEEEEcCCHHHHHHHHHHHHHHH
Confidence 122211 12223468999998 68999999999999999999999875
No 88
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1
Probab=97.77 E-value=3.6e-05 Score=72.54 Aligned_cols=110 Identities=20% Similarity=0.350 Sum_probs=67.3
Q ss_pred CcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCCeEEEEeCCCCCCccEEEEEeCCCCCCCCCCCcc
Q 002219 211 KLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGRV 290 (952)
Q Consensus 211 KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdSfL~yv~d~~~~~~~~v~l~D~~~~~~~~~~~~~ 290 (952)
-.|||||.+++.....| .. .-...|++|||||+++.|.|++++.+..+.....+.....++.. ...+
T Consensus 8 v~k~G~L~rK~~~~~~g--kk----------~~~~~Wk~rw~vL~~~~L~~yk~~~~~~~~~~~~~~~~~~i~L~-~~~v 74 (122)
T 1dro_A 8 EGHEGYVTRKHEWDSTT--KK----------ASNRSWDKVYMAAKAGRISFYKDQKGYKSNPELTFRGEPSYDLQ-NAAI 74 (122)
T ss_dssp SSEEEEEEEECSCCCCC--CT----------TCCCCCEEEEEEESSSCCBEESSSSHHHHCTTCCSSCCCBCCCS-SCCC
T ss_pred eEEEEEEEEEEEEeCCC--cc----------CCCCCccEEEEEEECCEEEEEeCCcccccCCCcccCCCceEECC-CCEE
Confidence 46999998874321111 00 01257999999999999999998754432100000000001100 1112
Q ss_pred cccccccccCCcceeEEEEe-CceEEEEEecchhhHHHHHHHHHhcc
Q 002219 291 SLATEVKERNPLRHAFKVTC-GVRSIRLRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 291 ~~~~~~~~~~~~~~~~~i~~-~~r~l~l~~~s~~~~~~w~~~i~~~~ 336 (952)
..+. +....+|.|+|.. ..+...|.|.+...+.+|+.+|+.+.
T Consensus 75 ~~~~---d~~kr~~~F~l~t~~~~~~lfqA~s~~e~~~Wi~ai~~~i 118 (122)
T 1dro_A 75 EIAS---DYTKKKHVLRVKLANGALFLLQAHDDTEMSQWVTSLKAQS 118 (122)
T ss_dssp EECC---SSSSSTTEEEEECSSSCEEEEECSSSHHHHHHHHHHHHHH
T ss_pred EeCC---CCCCCCeEEEEEEcCCCEEEEECCCHHHHHHHHHHHHHHH
Confidence 2221 2233568999985 56899999999999999999999876
No 89
>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.75 E-value=4.3e-05 Score=74.25 Aligned_cols=80 Identities=18% Similarity=0.321 Sum_probs=59.8
Q ss_pred CCcceEEEEEeCCeEEEEeCCCCC--CccEEEEEeCCCCCCCCCCCcccccccccccCCcceeEEEEeC----ceEEEEE
Q 002219 245 DNWQKVWAVLKPGFLALLADPFDT--KPMDIIVFDVLPASDGNGEGRVSLATEVKERNPLRHAFKVTCG----VRSIRLR 318 (952)
Q Consensus 245 ~rw~kRWfvVKdSfL~yv~d~~~~--~~~~v~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~----~r~l~l~ 318 (952)
..|++|||++|+++|.|++++++. .|..+|.+.. .++. .... -.+.+++|++... .|.+-|+
T Consensus 26 K~~KrrWFvlk~~~L~YyK~kee~~~ePig~I~L~g---------ceV~--pd~~-~~~~kf~ikl~iPs~~g~r~y~l~ 93 (137)
T 2ys3_A 26 KGYRQHWVVFKETTLSYYKSQDEAPGDPIQQLNLKG---------CEVV--PDVN-VSGQKFCIKLLVPSPEGMSEIYLR 93 (137)
T ss_dssp SSSCCCEEEECSSCEEEESSTTTTTSCCSCCBCTTT---------CEEE--ECCB-GGGTBEEEEEEEECSSSEEEEEEE
T ss_pred ccceeEEEEEeCCEEEEECCchhccCCCceEEECCC---------CEEe--cccc-ccCCceEEEEEccCCCCceEEEEE
Confidence 468999999999999999888774 7877776542 2221 1100 0234678777654 4999999
Q ss_pred ecchhhHHHHHHHHHhcc
Q 002219 319 TRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 319 ~~s~~~~~~w~~~i~~~~ 336 (952)
|.|+.++.+|++++..+.
T Consensus 94 cdsEeqy~~WMaA~rlAs 111 (137)
T 2ys3_A 94 CQDEQQYARWMAGCRLAS 111 (137)
T ss_dssp ESSHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhc
Confidence 999999999999999876
No 90
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=97.72 E-value=6.6e-05 Score=84.59 Aligned_cols=95 Identities=19% Similarity=0.281 Sum_probs=65.1
Q ss_pred CcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCCeEEEEeCCCCCCccEEEEEeCCCCCCCCCCCcc
Q 002219 211 KLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGRV 290 (952)
Q Consensus 211 KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdSfL~yv~d~~~~~~~~v~l~D~~~~~~~~~~~~~ 290 (952)
--|||||.|+... | + ....|++||||++++.|.|.++. +..+..+ +|.. ...+
T Consensus 278 ~~k~G~L~K~~~~---~------------~--~~~~WkkRwfvL~~~~L~y~k~~-~~~~~~~--i~l~-------~~~v 330 (385)
T 2q13_A 278 TRKAGYLNARNKT---G------------L--VSSTWDRQFYFTQGGNLMSQARG-DVAGGLA--MDID-------NCSV 330 (385)
T ss_dssp SCCEEEEEEC-------------------------CCEEEEEEEETTEEEEECSS-CSSCEEE--EECT-------TCEE
T ss_pred ccEEEEEEEecCC---C------------C--CcCCceeEEEEEECCEEEEecCC-CcCCCce--EEcc-------ceEE
Confidence 4699999987310 0 0 11369999999999999999873 3334333 3321 1122
Q ss_pred cccccccccCCcceeEEEEeCc--eEEEEEecchhhHHHHHHHHHhcc
Q 002219 291 SLATEVKERNPLRHAFKVTCGV--RSIRLRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 291 ~~~~~~~~~~~~~~~~~i~~~~--r~l~l~~~s~~~~~~w~~~i~~~~ 336 (952)
... +....++.|.|.+.. |++.|.|.|...+..|+.+|..+.
T Consensus 331 ~~~----~~~~r~~~F~i~t~~~~~~~~l~A~s~~e~~~Wi~ai~~~~ 374 (385)
T 2q13_A 331 MAV----DCEDRRYCFQITSFDGKKSSILQAESKKDHEEWICTINNIS 374 (385)
T ss_dssp EEE----CCTTCSSEEEEECTTSCBCCCEECSSHHHHHHHHHHHHHHH
T ss_pred Eec----cccCCCceEEEEeCCCCeEEEEEeCCHHHHHHHHHHHHHHH
Confidence 111 123446899999988 999999999999999999999865
No 91
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=97.71 E-value=5e-05 Score=86.00 Aligned_cols=92 Identities=21% Similarity=0.357 Sum_probs=67.1
Q ss_pred cceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEE--eCCeEEEEeCCCCCCccEEEEEeCCCCCCCCCCCc
Q 002219 212 LKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVL--KPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGR 289 (952)
Q Consensus 212 gKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvV--KdSfL~yv~d~~~~~~~~v~l~D~~~~~~~~~~~~ 289 (952)
.|||||.|+. + . ...|++||||| +++.|.|++++.+.+|..+|.++.. .
T Consensus 147 ~keG~L~KrG-----~-----------~----~k~WkrRwFVL~~~~~~L~Yy~~~~~~~p~g~I~L~~~---------~ 197 (386)
T 3lju_X 147 YREGFLWKRG-----R-----------D----NGQFLSRKFVLTEREGALKYFNRNDAKEPKAVMKIEHL---------N 197 (386)
T ss_dssp EEEEEEEEEC-----S-----------S----SCCEEEEEEEEETTTTEEEEEC-----CCSEEEEGGGE---------E
T ss_pred ccccceeeec-----c-----------c----cCCceEEEEEEEcCCCEEEEECCCCccCcccEEEeecc---------E
Confidence 5999999982 1 0 15799999999 9999999999888899999988641 1
Q ss_pred ccccccccccCCcceeEEEE----eCceEEEEEecchhhHHHHHHHHHhc
Q 002219 290 VSLATEVKERNPLRHAFKVT----CGVRSIRLRTRTGAKVRDWVAAINDA 335 (952)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~i~----~~~r~l~l~~~s~~~~~~w~~~i~~~ 335 (952)
.... .+..+..++|.|. .+.|.+.+.+.|...+.+|+.+|..+
T Consensus 198 ~~~~---~~~~~~~~~f~I~~~~~~~~R~y~l~A~s~~e~~~Wi~aIr~a 244 (386)
T 3lju_X 198 ATFQ---PAKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAA 244 (386)
T ss_dssp EEEC---HHHHTSTTCEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHH
T ss_pred EEEc---ccccCCCceEEEEEecCCCceEEEEEcCCHHHHHHHHHhhhhc
Confidence 1111 0112346788887 67899999999999999999999875
No 92
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=97.59 E-value=6.2e-05 Score=85.45 Aligned_cols=94 Identities=18% Similarity=0.256 Sum_probs=63.7
Q ss_pred cceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCCeEEEEeCCCCCCccEEEEEeCCCCCCCCCCCccc
Q 002219 212 LKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGRVS 291 (952)
Q Consensus 212 gKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdSfL~yv~d~~~~~~~~v~l~D~~~~~~~~~~~~~~ 291 (952)
-|||||.||+.. | . . ...|+||||||+++.|.|.+.... .+..++ |-. ...+.
T Consensus 302 ~k~G~L~k~~~~---g----------~-~---~~~W~rrwfvl~~~~l~y~~~~~~-~~~~~~--~l~-------~~~v~ 354 (407)
T 4h8s_A 302 QKAGYLNLRNKT---G----------L-V---TTTWERLYFFTQGGNLMCQPRGAV-AGGLIQ--DLD-------NCSVM 354 (407)
T ss_dssp CCEEEEEEEEEC---S----------S-S---CEEEEEEEEEECSSCEECCCTTCS-SCCCCB--CSS-------CCEEE
T ss_pred eeeceeeeeccC---C----------C-C---CCCceEEEEEEECCEEEEEeCCCC-CCCeEE--ECC-------ceEEE
Confidence 499999998531 2 0 0 146999999999999999975432 222211 110 11222
Q ss_pred ccccccccCCcceeEEEEeCc--eEEEEEecchhhHHHHHHHHHhcc
Q 002219 292 LATEVKERNPLRHAFKVTCGV--RSIRLRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 292 ~~~~~~~~~~~~~~~~i~~~~--r~l~l~~~s~~~~~~w~~~i~~~~ 336 (952)
.. +....++.|.|...+ |.+.|.+.|...+..|+.+|+.+.
T Consensus 355 ~~----~~~~r~~cF~i~~~~~~~~~~l~A~s~~e~~~Wi~ai~~a~ 397 (407)
T 4h8s_A 355 AV----DCEDRRYCFQITTPNGKSGIILQAESRKENEEWICAINNIS 397 (407)
T ss_dssp EE----CCTTCSSEEEEECTTSSCCEEEECSSSHHHHHHHHHHHHHH
T ss_pred EC----CCCCCCceEEEEecCCCceEEEEcCCHHHHHHHHHHHHHHH
Confidence 11 123356889998754 679999999999999999999876
No 93
>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}
Probab=97.54 E-value=0.00068 Score=65.22 Aligned_cols=99 Identities=17% Similarity=0.199 Sum_probs=68.9
Q ss_pred ceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCCeEEEEeCCC---------CCCccEEEEEeCCCCCC
Q 002219 213 KEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPF---------DTKPMDIIVFDVLPASD 283 (952)
Q Consensus 213 KEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdSfL~yv~d~~---------~~~~~~v~l~D~~~~~~ 283 (952)
.||||..+...+. | ... -...|+++||||+++.|.|++... ...|..++.+..
T Consensus 3 ~~G~L~rk~llK~-G-~k~-----------~~ksWkr~W~vL~g~~L~yf~~~~~~~~~~~~~~~~P~~~i~L~g----- 64 (126)
T 2dtc_A 3 MEGPLRRKTLLKE-G-RKP-----------ALSSWTRYWVVLSGATLLYYGAKSLRGTDRKHYKSTPGKKVSIVG----- 64 (126)
T ss_dssp EEEEEEEEEEEBT-T-BCC-----------SSCCCEEEEEEEETTEEEEEEBSSSCCSSGGGBCSSCSEEEECTT-----
T ss_pred eeeeeeeeehhhc-C-Ccc-----------cccCcccEEEEEeCCEEEEEcccccccccccccccCCCceEEeCC-----
Confidence 4899987754432 2 110 015799999999999999998542 335666665542
Q ss_pred CCCCCcccccccccccCCcceeEEEEeC--ceEEEEEecchhhHHHHHHHHHhccC
Q 002219 284 GNGEGRVSLATEVKERNPLRHAFKVTCG--VRSIRLRTRTGAKVRDWVAAINDAGL 337 (952)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~r~l~l~~~s~~~~~~w~~~i~~~~~ 337 (952)
..|.. .+.....+.|.|.+. +....+.|.|...+..|+.+|..+..
T Consensus 65 ----~~V~~----~e~~~~~~~F~L~~~~~G~~Y~fqA~s~~~~~~W~~ai~~a~~ 112 (126)
T 2dtc_A 65 ----WMVQL----PDDPEHPDIFQLNNPDKGNVYKFQTGSRFHAILWHKHLDDACK 112 (126)
T ss_dssp ----CEEEC----CCCTTSTTEEEEECTTSCSEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred ----CEEEe----cCCCCCCCEEEEeeCCCCCEEEEeCCCHHHHHHHHHHHHHHHh
Confidence 22321 122224678999965 78899999999999999999999873
No 94
>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}
Probab=97.53 E-value=0.00044 Score=65.60 Aligned_cols=106 Identities=14% Similarity=0.250 Sum_probs=67.5
Q ss_pred CCCcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCCeEEEEeCCCCCCc----------cEEEEEeC
Q 002219 209 GPKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKP----------MDIIVFDV 278 (952)
Q Consensus 209 G~KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdSfL~yv~d~~~~~~----------~~v~l~D~ 278 (952)
|.-.|||||.+++.... | .+ .....|+++||||+++.|.|++|..+... .-...+|-
T Consensus 6 ~~v~keG~L~rK~~~~~-g--kk----------~~~r~W~~~w~VL~~~~L~~yKd~~~~~~~~~~~~~~~~~~~~~i~L 72 (124)
T 3pp2_A 6 KTLDKAGVLHRTKTADK-G--KR----------LRKKHWSASWTVLEGGVLTFFKDSKTSAAGGLRQPSKFSTPEYTVEL 72 (124)
T ss_dssp ---CEEEEEEEEEEEET-T--EE----------CSSCCCEEEEEEEETTEEEEESCSBCC---CBCCGGGGCSEEEEEEC
T ss_pred CcEEEEEEEEEEEeccC-C--cc----------CCCCCceEEEEEEECCEEEEEecCccccccCccCcccccCCcceEEc
Confidence 44579999998753211 1 00 01257999999999999999988655421 12233442
Q ss_pred CCCCCCCCCCcccccccccccCCcceeEEEEeC-ceEEEEEecchhhHHHHHHHHHhcc
Q 002219 279 LPASDGNGEGRVSLATEVKERNPLRHAFKVTCG-VRSIRLRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~r~l~l~~~s~~~~~~w~~~i~~~~ 336 (952)
. +..+..+. ++.+..+|-|+|... ++...|.+.+...+..|..+|..+.
T Consensus 73 ~-------~a~v~~~~--~d~~krk~vF~l~t~~~~~ylfqA~s~~e~~~Wi~aI~~aI 122 (124)
T 3pp2_A 73 R-------GATLSWAP--KDKSSRKNVLELRSRDGSEYLIQHDSEAIISTWHKAIAQGI 122 (124)
T ss_dssp T-------TCEEEECC--GGGCSSSSEEEEECTTSCEEEEECSCHHHHHHHHHHHHHHH
T ss_pred C-------CCEEEecc--cccCCCceEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHH
Confidence 1 12222221 123345688999764 5789999999999999999999864
No 95
>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=97.44 E-value=0.00027 Score=66.96 Aligned_cols=87 Identities=14% Similarity=0.277 Sum_probs=59.0
Q ss_pred CcceEEEEEeCCeEEEEeCCCC---CCccEEEEEeCCCCCCCCCCCcccccccccccCCcceeEEEEeC------ceEEE
Q 002219 246 NWQKVWAVLKPGFLALLADPFD---TKPMDIIVFDVLPASDGNGEGRVSLATEVKERNPLRHAFKVTCG------VRSIR 316 (952)
Q Consensus 246 rw~kRWfvVKdSfL~yv~d~~~---~~~~~v~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~------~r~l~ 316 (952)
.|++|||||.++-|.|+++..+ .+|..+|-+|..+....-....+-.+ .+....+-|+|... .+.+-
T Consensus 19 ~Wkkr~~vL~~~kL~~y~~~~~~~~~~p~~~Idl~~~~~V~~V~~~d~i~~----~~~~~p~iF~I~~~~~~~~~~~~l~ 94 (117)
T 2rov_A 19 GWVKKYVIVSSKKILFYDSEQDKEQSNPYMVLDIDKLFHVRPVTQTDVYRA----DAKEIPRIFQILYANEGISSAKNLL 94 (117)
T ss_dssp CCCEEEEEEETTEEEEESCHHHHHTTCCSEEECGGGEEEEEECCTTTCSSS----CTTTGGGEEEEEECSSSSTTCEEEE
T ss_pred CcEEEEEEEECCEEEEEECCCCcccCCceEEEECcccEEEEEccccccccc----ccccCCcEEEEEeCCCCCCCCcEEE
Confidence 6999999999999999986542 26777765554332110001111000 12234567999753 59999
Q ss_pred EEecchhhHHHHHHHHHhcc
Q 002219 317 LRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 317 l~~~s~~~~~~w~~~i~~~~ 336 (952)
|.|.|.....+|..+|....
T Consensus 95 l~A~s~~e~~~WV~aL~~~i 114 (117)
T 2rov_A 95 LLANSTEEQQKWVSRLVKKI 114 (117)
T ss_dssp EECSSHHHHHHHHHHHHHHC
T ss_pred EEeCCHHHHHHHHHHHHHHh
Confidence 99999999999999998764
No 96
>4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin activation, cytoplas membrane, cell adhesion; HET: SRT; 1.90A {Homo sapiens} PDB: 2lko_A*
Probab=97.43 E-value=0.00074 Score=67.40 Aligned_cols=80 Identities=16% Similarity=0.287 Sum_probs=61.2
Q ss_pred CCcceEEEEEeCCeEEEEeCCCC--CCccEEEEEeCCCCCCCCCCCcccccccccccCCcceeEEEEe----CceEEEEE
Q 002219 245 DNWQKVWAVLKPGFLALLADPFD--TKPMDIIVFDVLPASDGNGEGRVSLATEVKERNPLRHAFKVTC----GVRSIRLR 318 (952)
Q Consensus 245 ~rw~kRWfvVKdSfL~yv~d~~~--~~~~~v~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~----~~r~l~l~ 318 (952)
..|+++|||+||..|.|++++++ +.+..+|-+- +.+|.... .-...++++++.. |.+.+-|+
T Consensus 64 KgyKryWFv~kd~~LsyYKskEe~~geP~~~I~Lr---------GCEVtpDV---nva~~Kf~IkL~vP~~~gm~e~~Lr 131 (173)
T 4f7h_A 64 KGYKQYWCTFKDTSISCYKSKEESSGTPAHQMNLR---------GCEVTPDV---NISGQKFNIKLLIPVAEGMNEIWLR 131 (173)
T ss_dssp CCCEEEEEEEETTEEEEESCGGGCSSCCSEEEECT---------TCEEEEEE---ETTTTEEEEEEEEEETTEEEEEEEE
T ss_pred ccceeEEEEEeCCEEEEEcCHhHhcCCCceEEecC---------ceEEeccc---cccccceeEEEeccCCCCcceeeee
Confidence 57999999999999999998887 7788777553 23332111 1123467777766 67889999
Q ss_pred ecchhhHHHHHHHHHhcc
Q 002219 319 TRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 319 ~~s~~~~~~w~~~i~~~~ 336 (952)
|.++.++.+|+++..-+.
T Consensus 132 cd~E~qya~WMAAcrLAs 149 (173)
T 4f7h_A 132 CDNEKQYAHWMAACRLAS 149 (173)
T ss_dssp ESSHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHhhhhc
Confidence 999999999999998865
No 97
>3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens}
Probab=97.40 E-value=0.00052 Score=73.62 Aligned_cols=100 Identities=13% Similarity=0.212 Sum_probs=69.5
Q ss_pred CCcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCCeEEEEeCCCCCCccEEEEE-eCCCCCCCCCCC
Q 002219 210 PKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVF-DVLPASDGNGEG 288 (952)
Q Consensus 210 ~KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdSfL~yv~d~~~~~~~~v~l~-D~~~~~~~~~~~ 288 (952)
...+||+|.++.. | ...|+||||+||+|.|.|.++..+....++..+ +- . +.
T Consensus 131 ~P~~~G~L~~ke~----~----------------~K~WkkRyfvLr~sgLy~~~k~~sk~~r~l~~~~~L-~------~~ 183 (256)
T 3hk0_A 131 SPEIQGFLHVKEL----G----------------KKSWKKLYVCLRRSGLYCSTKGTSAAPRHLQLLADL-E------DS 183 (256)
T ss_dssp CEEEEEEEEEECT----T----------------SSCEEEEEEEEETTEEEEESSTTCCCGGGEEEEECC-T------TE
T ss_pred CCcceeEEEEecC----C----------------CCcceEEEEEEeCCEEEEEecCCCCccccceEEEEc-C------CC
Confidence 4469999998731 1 157999999999999999987766667775433 31 1 12
Q ss_pred ccccccc--ccccCCcceeEEEEeCce------EEEEEecchhhHHHHHHHHHhcc
Q 002219 289 RVSLATE--VKERNPLRHAFKVTCGVR------SIRLRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 289 ~~~~~~~--~~~~~~~~~~~~i~~~~r------~l~l~~~s~~~~~~w~~~i~~~~ 336 (952)
.+..+.. .+-..|+.++|.|..... ..-|-|.+......|+.+|..+.
T Consensus 184 ~vy~~~~~kKk~kaPt~~~F~ik~~k~~~~~~~~~~lcaede~~~~~W~~aIr~ak 239 (256)
T 3hk0_A 184 NIFSLIAGRKQYNAPTDHGLCIKPNKVRNETKELRLLCAEDEQTRTSWMTAFRLLK 239 (256)
T ss_dssp EEEEESSTHHHHCCSSSEEEEEEETTCSSCCTTCEEEEESSHHHHHHHHHHHHHHH
T ss_pred EEEEecccccccCCCCCCEEEEEcccccCCCceEEEEEeCCHHHHHHHHHHHHHHH
Confidence 3333321 122457789999985433 36778888999999999998764
No 98
>4bbk_A Kindlin-1, fermitin family homolog 1; PH domain, cell adhesion; 2.10A {Mus musculus}
Probab=97.29 E-value=0.0011 Score=65.52 Aligned_cols=80 Identities=15% Similarity=0.215 Sum_probs=59.4
Q ss_pred CCcceEEEEEeCCeEEEEeCCCC--CCccEEEEEeCCCCCCCCCCCcccccccccccCCcceeEEEEeC----ceEEEEE
Q 002219 245 DNWQKVWAVLKPGFLALLADPFD--TKPMDIIVFDVLPASDGNGEGRVSLATEVKERNPLRHAFKVTCG----VRSIRLR 318 (952)
Q Consensus 245 ~rw~kRWfvVKdSfL~yv~d~~~--~~~~~v~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~----~r~l~l~ 318 (952)
..|+++|||+||+.|.|++++++ +.+...|-+-. .+|.-.- .-...+++|++... ...+-|+
T Consensus 43 KgfKryWfv~kDt~LsyYKSkEe~~geP~~~inLrG---------CEVtPDV---nva~~Kf~ikL~ip~~~gm~e~~Lr 110 (165)
T 4bbk_A 43 KACKQYWFVFKDTSIAYFKNKELEQGEPIEKLNLRG---------CEIVPDV---NVSGRKFGIKLLIPVADGMNEVYLR 110 (165)
T ss_dssp -CCEEEEEEEETTEEEEESSGGGTTSCCSEEEECTT---------CEEEEEE---ETTTTEEEEEEEEEETTEEEEEEEE
T ss_pred ccceeEEEEEeCCEEEEEcCHHHhcCCCceEEecCc---------cEEeccc---ccccceeeEEEecCCCCcceeeeee
Confidence 57999999999999999998876 67777775531 2332100 01235788887654 5689999
Q ss_pred ecchhhHHHHHHHHHhcc
Q 002219 319 TRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 319 ~~s~~~~~~w~~~i~~~~ 336 (952)
|.++.+..+|++++.-+.
T Consensus 111 cdsE~QYa~WMAAcrLAs 128 (165)
T 4bbk_A 111 CDHEDQYARWMAACILAS 128 (165)
T ss_dssp ESSHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHhhhcc
Confidence 999999999999998875
No 99
>1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A
Probab=97.11 E-value=0.00092 Score=66.02 Aligned_cols=89 Identities=18% Similarity=0.109 Sum_probs=68.0
Q ss_pred CC-CcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCCeEEEEeCCCCCCccEEEEEeCCCCCCCCCC
Q 002219 209 GP-KLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGE 287 (952)
Q Consensus 209 G~-KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdSfL~yv~d~~~~~~~~v~l~D~~~~~~~~~~ 287 (952)
|. -.|+|||.||+ | ..|++||||+++.-.+|+-+|........|.+|..
T Consensus 49 ge~Ilk~G~v~Krk-----G-----------------l~~kkR~liLT~~PrL~Yvdp~~~~~KGeIpls~~-------- 98 (151)
T 1w1g_A 49 NNLILKMGPVDKRK-----G-----------------LFARRRQLLLTEGPHLYYVDPVNKVLKGEIPWSQE-------- 98 (151)
T ss_dssp TCCEEEEEEEEEEE-----T-----------------TEEEEEEEEEETTTEEEEEETTTTEEEEEECCCTT--------
T ss_pred CCcEEEEEEEEecc-----c-----------------CcceeEEEEEcCCceEEEEcCccccccceEecCCC--------
Confidence 44 37999999985 2 23889999999877666667999999888888852
Q ss_pred CcccccccccccCCcceeEEEEeCceEEEEEecchhhHHHHHHHHHhcc
Q 002219 288 GRVSLATEVKERNPLRHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~i~~~~r~l~l~~~s~~~~~~w~~~i~~~~ 336 (952)
..+.+ + . ...|.|...+|+..|.+. ...+.+|.++|+++.
T Consensus 99 l~ve~----k---~-~~~F~I~Tp~RtY~~~d~-~~~AqeWv~aI~~~~ 138 (151)
T 1w1g_A 99 LRPEA----K---N-FKTFFVHTPNRTYYLMDP-SGNAHKWCRKIQEVW 138 (151)
T ss_dssp CEEEE----S---S-SSEEEEEETTEEEEEECT-TSCHHHHHHHHHHHH
T ss_pred eeEEE----c---C-CCEEEEECCCceEEEEcC-ccCHHHHHHHHHHHH
Confidence 12211 1 1 236999999999999987 889999999999864
No 100
>3hpc_X SNX5 protein; sprting nexin, PHOX, SNX5-PX, phosphatidylinositol, PI(4,5)P2, cell adhesion, protein transport; 1.47A {Rattus norvegicus} PDB: 3hpb_A
Probab=97.10 E-value=0.004 Score=62.32 Aligned_cols=47 Identities=11% Similarity=0.244 Sum_probs=37.3
Q ss_pred CCC-eEEEeeeeecCCCCCCcceeEEEEEEEec-----ceEEEEEEehhhHHHHHHHHH
Q 002219 42 ELP-KASIVSVSRPDAGDISPMLLSYTIEVQYK-----QFKWKLVKKASQVFYLHFALK 94 (952)
Q Consensus 42 ~~p-~v~I~~~er~~s~~~~~~~~~Y~Iel~~g-----~~~W~v~r~~~~f~~Lh~~lk 94 (952)
+.+ .|.|.+...... ++.|+|..+-. .-.|+|.|+|+||..||..|.
T Consensus 9 ~~~l~i~V~dp~~~~~------~v~Y~I~t~t~~p~f~~~~~~V~RRysdF~~L~~~L~ 61 (161)
T 3hpc_X 9 DPSLQIDIPDALSERD------KVKFTVHTKTTLPTFQSPEFSVTRQHEDFVWLHDTLT 61 (161)
T ss_dssp SCSEEEEEEEEEEETT------EEEEEEEEEECCTTSSSSEEEEEECHHHHHHHHHHHH
T ss_pred CCeEEEEECCCeEecC------CEEEEEEEEeCCcccCCCcceEEecHHHHHHHHHHHH
Confidence 334 788888765443 68999998754 348999999999999999887
No 101
>3qph_A TRMB, A global transcription regulator; transcriptional regulator; HET: SUC; 2.99A {Pyrococcus furiosus}
Probab=96.94 E-value=0.0014 Score=72.91 Aligned_cols=109 Identities=9% Similarity=0.115 Sum_probs=72.6
Q ss_pred HHHHHHHHHHHHHhccCeEEEEeeeeccCCCCChhHHHHHHHHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCCCCCch
Q 002219 762 EESIHCAYCSLIEKAEHFIYIENQFFISGLSGDEIIRNRVLESLYRRILRAYNEKKCFRVIIVIPLLPGFQGGVDDGGAA 841 (952)
Q Consensus 762 E~sI~~ayl~~I~~A~~~IYIEnqyFis~~~~~~~v~n~I~~AL~~RI~~A~~~g~~vrV~IvlPl~pgf~g~~~d~~~~ 841 (952)
...|.+...++|.+|++.||+..++. ..+++..-+.+|.++| |+|.+++|..|+ . +
T Consensus 117 ~~~I~~ri~eli~~A~~eI~i~~~~~-------------~l~~l~~~L~~a~~RG--V~Vrvi~~~~~d-------~-a- 172 (342)
T 3qph_A 117 FDEAIEMFRESLYSAKNEVIVVTPSE-------------FFETIREDLIKTLERG--VTVSLYIDKIPD-------L-S- 172 (342)
T ss_dssp HHHHHHHHHHHHHHCSSEEEEEECHH-------------HHHHHHHHHHHHHHTT--CEEEEEESSCCC-------C-G-
T ss_pred HHHHHHHHHHHHHhhheEEEEEeCHH-------------HHHHHHHHHHHHHhCC--CEEEEEECCCCC-------h-h-
Confidence 56899999999999999999975331 2334444445888999 555555675443 1 0
Q ss_pred hHHHHHHHHHHHHHhhHHHHHHHHHHhcCCCccccc-ccccccccccccCCCCcccccceeeeeEEEEeCcEEEEecccC
Q 002219 842 SVRAIMHWQYRTICRGQNSILHNLYALLGPKTHDYI-SFYGLRAYGRLFEDGPVATSQVYVHSKVMIIDDSIALIGSANI 920 (952)
Q Consensus 842 ~~r~i~~~qy~ti~rg~~si~~~L~~~~Gv~~~~Yi-~f~~lr~~~~~~~~g~~~te~iyvHSKlmIVDD~~~iIGSANi 920 (952)
. ..|. .....|.+. ...-++|+|++.+++|++|.
T Consensus 173 ~-------------------------------~~~~~~~~~vR~~~--------------~~p~l~ivD~~~alv~~~~~ 207 (342)
T 3qph_A 173 E-------------------------------FKGKGNFFVRQFYK--------------LNHLIGMTDGKEVVTIQNAT 207 (342)
T ss_dssp G-------------------------------GSSSSEEEEEECSC--------------CCSEEEEETTTEEEEECSSS
T ss_pred h-------------------------------hhccccceEEEEcC--------------CCcEEEEEECCEEEEecccc
Confidence 0 0010 011123221 11136999999999999998
Q ss_pred -Cc---CccCCCCCcceEEEEEchhh
Q 002219 921 -ND---RSLLGSRDSEVSVGLYLFIL 942 (952)
Q Consensus 921 -n~---RSm~G~rDsEi~v~i~d~~~ 942 (952)
+. ||+ ..++| +++|.++.+
T Consensus 208 ~~~~~~rS~--~~~~e-aliv~~~~l 230 (342)
T 3qph_A 208 FDSIGPPSF--KSTYP-EIIFSQYSL 230 (342)
T ss_dssp CCSSCCCEE--EECCH-HHHHHHHHH
T ss_pred ccccccccc--ccccc-EEEEECHHH
Confidence 44 999 88999 999999887
No 102
>4gmv_A RAS-associated and pleckstrin homology domains-CO protein 1; RA-PH, coiled-coil region, RAS-association domain, pleckstri homology domain; 2.40A {Homo sapiens} PDB: 4gn1_A
Probab=96.93 E-value=0.0018 Score=70.25 Aligned_cols=101 Identities=14% Similarity=0.138 Sum_probs=61.8
Q ss_pred CCCcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCCeEEEEeCCCCCCccEEE-EEeCCCCCCCCCC
Q 002219 209 GPKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDII-VFDVLPASDGNGE 287 (952)
Q Consensus 209 G~KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdSfL~yv~d~~~~~~~~v~-l~D~~~~~~~~~~ 287 (952)
.+..++|+|.++.. | ...|+||||+||+|.|.|++...+..+++.. |.+-. +
T Consensus 156 ~~pe~~G~L~~k~~----~----------------~k~WkkRyfvLr~sgLyy~~K~~sk~~r~l~~l~~L~-------~ 208 (281)
T 4gmv_A 156 TVPEIEGVLWLKDD----G----------------KKSWKKRYFLLRASGIYYVPKGKAKVSRDLVCFLQLD-------H 208 (281)
T ss_dssp CCCCCEEEEEEECT----T----------------SSCEEEEEEEECSSCEEEC---------CCEEEECGG-------G
T ss_pred CCCccEEEEEEECC----C----------------CCCCeEEEEEEeCCEEEEEeCCCCCccccceEEEEcC-------C
Confidence 35679999998731 1 1479999999999999999765444455543 32311 1
Q ss_pred Cccccccc--ccccCCcceeEEEEeCc------eEEEEEecchhhHHHHHHHHHhcc
Q 002219 288 GRVSLATE--VKERNPLRHAFKVTCGV------RSIRLRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 288 ~~~~~~~~--~~~~~~~~~~~~i~~~~------r~l~l~~~s~~~~~~w~~~i~~~~ 336 (952)
.+|..+.. .+-..|..++|.|.... +.-.|-|.+......|+.+|.-+.
T Consensus 209 ~~VY~~~~~kkk~kaPt~~~F~ik~~~~~~~~~~~~~~caede~~~~~Wv~Air~ak 265 (281)
T 4gmv_A 209 VNVYYGQDYRNKYKAPTDYCLVLKHPQIQKKSQYIKYLCCDDVRTLHQWVNGIRIAK 265 (281)
T ss_dssp CEEEEESSHHHHTCCSCSCEEEEECTTCCSCCTTCEEEECSSHHHHHHHHHHHHHHH
T ss_pred cEEEEecccccccCCCCCcEEEEecCccCCCCCceEEEEeCCHHHHHHHHHHHHHHh
Confidence 33443321 12246788999998632 335566677888899999998763
No 103
>2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1
Probab=96.89 E-value=0.0037 Score=61.71 Aligned_cols=38 Identities=18% Similarity=0.419 Sum_probs=32.8
Q ss_pred cCCcceeEEEEeC---ceEEEEEecchhhHHHHHHHHHhcc
Q 002219 299 RNPLRHAFKVTCG---VRSIRLRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 299 ~~~~~~~~~i~~~---~r~l~l~~~s~~~~~~w~~~i~~~~ 336 (952)
++...+.|+|... .+.+.|-+.|...+.+|+.+|.+++
T Consensus 107 ~~~~~~vF~I~~~~~~~~~~~laAds~Eem~dW~kaIreaa 147 (150)
T 2fjl_A 107 KNNRLFVFSISMPSVAQWSLDVAADSQEELQDWVKKIREVA 147 (150)
T ss_dssp SSSCSCEEEEECTTTSSCCEEEEESSHHHHHHHHHHHHHHH
T ss_pred CCCCceEEEEeCCCCCCceEEEEeCCHHHHHHHHHHHHHHH
Confidence 3446789999877 4589999999999999999999986
No 104
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=96.83 E-value=0.0014 Score=74.31 Aligned_cols=98 Identities=15% Similarity=0.282 Sum_probs=59.1
Q ss_pred CcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEe-CCeEEEEeCCCCCCccEEEEEeCCCCCCCCCCCc
Q 002219 211 KLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLK-PGFLALLADPFDTKPMDIIVFDVLPASDGNGEGR 289 (952)
Q Consensus 211 KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVK-dSfL~yv~d~~~~~~~~v~l~D~~~~~~~~~~~~ 289 (952)
--|||||.|+. + . ...|++||||++ |+-|.|+++.....+..++.+.... .. .
T Consensus 6 v~keG~L~K~g-----~-----------~----~k~Wk~r~fvL~~~~~l~yyk~~~~~~~~~~i~l~~~~-~~-----~ 59 (446)
T 4ejn_A 6 IVKEGWLHKRG-----E-----------Y----IKTWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFS-VA-----Q 59 (446)
T ss_dssp EEEEEEEEEEE-----T-----------T----TTEEEEEEEEEETTSBEEEESSCC-------CCCGGGB-CT-----T
T ss_pred EEEEeeEEeec-----c-----------c----cccccceEEEEeeCCEEEEEecCCCCCccCcccccCcc-cc-----c
Confidence 46999999883 1 1 147999999998 8999999887666665555443210 00 0
Q ss_pred ccccccccccCCcceeEEEEeCceEE----EEEecchhhHHHHHHHHHhccC
Q 002219 290 VSLATEVKERNPLRHAFKVTCGVRSI----RLRTRTGAKVRDWVAAINDAGL 337 (952)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~i~~~~r~l----~l~~~s~~~~~~w~~~i~~~~~ 337 (952)
..+ .....+..+.|.|...+.+. .+.+.+......|..+|..+..
T Consensus 60 ~~~---~~~~~~~~~~f~I~~~~~~~~~~r~~~~~~~ee~e~W~~ai~~~i~ 108 (446)
T 4ejn_A 60 CQL---MKTERPRPNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQTVAD 108 (446)
T ss_dssp CEE---EEECSSSTTEEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred eee---cCCCCCCCceeEEEcCCCceeeeeEEecCCHHHHHHHHHHHHhhhh
Confidence 000 11122335678886554322 5677888899999999998763
No 105
>2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.90 E-value=0.052 Score=51.99 Aligned_cols=102 Identities=17% Similarity=0.181 Sum_probs=61.4
Q ss_pred CCCcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCCeEEEEeCCCCCCccEEEEEeCCCCCCCCC--
Q 002219 209 GPKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNG-- 286 (952)
Q Consensus 209 G~KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdSfL~yv~d~~~~~~~~v~l~D~~~~~~~~~-- 286 (952)
+.-.|+|+|.+.+-.+ |. .+|+||||||.... + ..+.-+=+||..-+.....
T Consensus 10 e~~vk~G~L~~q~q~~---------------fg---kKWrk~w~vLy~~S------~--~GvaRLE~yd~~ek~~r~~~~ 63 (127)
T 2d9w_A 10 DGAVKQGFLYLQQQQT---------------FG---KKWRRFGASLYGGS------D--CALARLELQEGPEKPRRCEAA 63 (127)
T ss_dssp CCSSEEEEEEECBCSS---------------SS---CBCCEEEEEEECCS------S--SSCCEEEEECCCSCSSSCSCC
T ss_pred CccccceEEEecccch---------------hh---hhhheeEEEEecCC------C--CCceeeeeeeccCccccCCCC
Confidence 3467999999886211 22 46999999976542 2 2234444566532211100
Q ss_pred C------Ccccccccccc-cC-CcceeEEEEeCceEEEEEecchhhHHHHHHHHHhccC
Q 002219 287 E------GRVSLATEVKE-RN-PLRHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDAGL 337 (952)
Q Consensus 287 ~------~~~~~~~~~~~-~~-~~~~~~~i~~~~r~l~l~~~s~~~~~~w~~~i~~~~~ 337 (952)
. .-+++.....+ .- ...+.|.|.+.+|...|-+.+. +..+|+++|-+.+.
T Consensus 64 rrVIrLsdCisV~~~~~e~~~pk~~~aF~l~T~er~~~laAe~~-E~~~Wi~~ic~~aF 121 (127)
T 2d9w_A 64 RKVIRLSDCLRVAEAGGEASSPRDTSAFFLETKERLYLLAAPAA-ERGDWVQAICLLAF 121 (127)
T ss_dssp EEEECGGGEEEEEECCSCSSSCSSCEEEEEEESSCEEEEEECHH-HHHHHHHHHHHHHT
T ss_pred ceEEEhhhCCeEecccCccCCCCcceEEEEEeCCcEEEEEeCcH-HHHHHHHHHHHHhc
Confidence 0 11222211111 00 1247899999999999999975 89999999988763
No 106
>3qph_A TRMB, A global transcription regulator; transcriptional regulator; HET: SUC; 2.99A {Pyrococcus furiosus}
Probab=95.83 E-value=0.03 Score=62.34 Aligned_cols=98 Identities=14% Similarity=0.026 Sum_probs=64.6
Q ss_pred eEEEEecHHHHHHHHHHHHHhcccEEEEeeecCCceeEEEcCCCCchhHHHHHHHHHHhhCCcEEEEEEccchhhhhhcc
Q 002219 364 QAQWFVDGKAAFEAIASSIEDAKSEIFICGWWLCPELYLRRPFHNHASSRLDALLEAKAKQGVQIYILLYKEVALALKIN 443 (952)
Q Consensus 364 ~v~~lvdG~~~f~al~~aI~~Ak~~I~I~~W~lsPe~Yl~rp~~d~~~~rL~~~L~~aA~rGVkVrILl~d~~~~~l~~~ 443 (952)
.+..+...+.....+.+.|.+|+++|++..| | ..-..+...|.++++|||+|++++.+....
T Consensus 110 ~v~~i~G~~~I~~ri~eli~~A~~eI~i~~~---~----------~~l~~l~~~L~~a~~RGV~Vrvi~~~~~d~----- 171 (342)
T 3qph_A 110 AIWRSRSFDEAIEMFRESLYSAKNEVIVVTP---S----------EFFETIREDLIKTLERGVTVSLYIDKIPDL----- 171 (342)
T ss_dssp CEEEESSHHHHHHHHHHHHHHCSSEEEEEEC---H----------HHHHHHHHHHHHHHHTTCEEEEEESSCCCC-----
T ss_pred eEEEEcCHHHHHHHHHHHHHhhheEEEEEeC---H----------HHHHHHHHHHHHHHhCCCEEEEEECCCCCh-----
Confidence 3444444467889999999999999999753 1 124678889999999999999997543211
Q ss_pred hhhhHHHHhccCCCeEEEEcCCCcCCCcccccCcceEEEEeCCeEEEccccC
Q 002219 444 SVYSKRKLLSIHENVRVLRYPDHFASGVYLWSHHEKLVIVDYQICFIGGLDL 495 (952)
Q Consensus 444 s~~~k~~L~~l~~gI~V~r~P~~~~~~~~~~rhHrKivVIDg~vAFvGGiNL 495 (952)
..+. ....+..|..++ . ...++|+|++.|++|+.|.
T Consensus 172 a~~~-----~~~~~~~vR~~~-~----------~p~l~ivD~~~alv~~~~~ 207 (342)
T 3qph_A 172 SEFK-----GKGNFFVRQFYK-L----------NHLIGMTDGKEVVTIQNAT 207 (342)
T ss_dssp GGGS-----SSSEEEEEECSC-C----------CSEEEEETTTEEEEECSSS
T ss_pred hhhh-----ccccceEEEEcC-C----------CcEEEEEECCEEEEecccc
Confidence 1111 111122232223 1 1126999999999999876
No 107
>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus}
Probab=95.67 E-value=0.0078 Score=65.24 Aligned_cols=115 Identities=16% Similarity=0.153 Sum_probs=64.4
Q ss_pred CCCCcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCCeEEEEeCCCCCCccEEEEEeCCCCCCCCCC
Q 002219 208 YGPKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGE 287 (952)
Q Consensus 208 ~G~KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdSfL~yv~d~~~~~~~~v~l~D~~~~~~~~~~ 287 (952)
.|.-.|||||..++.... |.+... .......|+++|+||+++.|.|+++...... +. -..+...+...+
T Consensus 8 ~~~v~k~G~L~rK~~l~~-~k~~K~-------~~~~~r~Wkk~w~VLkg~~L~fYKde~~~~~-~~-~~~p~~~I~L~g- 76 (279)
T 3a8n_A 8 QGTVRKAGALAVKNFLVH-KKNKKV-------ESATRRKWKHYWVSLKGCTLFFYETDGRSGI-DH-NSVPKHAVWVEN- 76 (279)
T ss_dssp --CCSCEEEEEEEEEEEE-ETTTEE-------ECCCCCCCEEEEEEEETTEECCBCCC----------CCCSSCCBCCS-
T ss_pred CCceeEEEEEEEEEEecc-cCCccc-------CCccCCCCeEEEEEEeCCEEEEEeccccccc-cc-ccCCCceEeccC-
Confidence 466789999987754211 100000 0011267999999999999999987543221 10 000100011100
Q ss_pred CcccccccccccCCcceeEEEEe-CceEEEEEecchhhHHHHHHHHHhcc
Q 002219 288 GRVSLATEVKERNPLRHAFKVTC-GVRSIRLRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~i~~-~~r~l~l~~~s~~~~~~w~~~i~~~~ 336 (952)
..+..+ .+.+..+|-|+|.+ ..+.+.+.+.+...+..|+.+|..+.
T Consensus 77 a~v~~a---~d~~kKk~vF~L~t~~g~~yLFQA~s~eEm~~WI~aI~~a~ 123 (279)
T 3a8n_A 77 SIVQAV---PEHPKKDFVFCLSNSLGDAFLFQTTSQTELENWITAIHSAC 123 (279)
T ss_dssp CEECCC---TTSSSSCSCCCEEETTTEEEECCCSCHHHHHHHHHHHHHHH
T ss_pred cEEEec---cccCCCCcEEEEEcCCCCEEEEeCCCHHHHHHHHHHHHHHH
Confidence 111111 12233457888875 46778999999999999999999865
No 108
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=94.21 E-value=0.064 Score=56.03 Aligned_cols=36 Identities=19% Similarity=0.494 Sum_probs=28.2
Q ss_pred CCCcceeEEEeeecCCccCCCCCCcccccCCCccccCCcceEEEEEeCCeEEEEeC
Q 002219 209 GPKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLAD 264 (952)
Q Consensus 209 G~KgKEG~l~kr~~~~~~G~~~~~~~~~~~~~~~~~~rw~kRWfvVKdSfL~yv~d 264 (952)
|...+||||.|+. | . ...|+|||||+|++.++|+..
T Consensus 19 ~~~~~~g~l~~~~-----~-----------~----~~~w~~rw~vl~~~~~~~~~~ 54 (228)
T 3tfm_A 19 GSPYFHSFLYMNG-----G-----------L----MNSWKRRWCVLKDETFLWFRS 54 (228)
T ss_dssp --CCEEEEEEECC-----T-----------T----TCCCEEEEEEEETTEEEEESS
T ss_pred CCCceEEEEeecC-----c-----------c----cccceEEEEEEeCCEEEEecc
Confidence 5678999999882 1 1 156999999999999999974
No 109
>2f5t_X Archaeal transcriptional regulator TRMB; sugar-binding; HET: MAL; 1.45A {Thermococcus litoralis} SCOP: b.38.5.1 d.136.1.5
Probab=93.79 E-value=0.14 Score=53.94 Aligned_cols=53 Identities=19% Similarity=0.181 Sum_probs=44.4
Q ss_pred cHHHHHHHHHHHHHhcccEEEEeeecCCceeEEEcCCCCchhHHHHHHHHHHhhCCcEEEEEEccc
Q 002219 370 DGKAAFEAIASSIEDAKSEIFICGWWLCPELYLRRPFHNHASSRLDALLEAKAKQGVQIYILLYKE 435 (952)
Q Consensus 370 dG~~~f~al~~aI~~Ak~~I~I~~W~lsPe~Yl~rp~~d~~~~rL~~~L~~aA~rGVkVrILl~d~ 435 (952)
+-+...+.+.+.|++|+++|++..| ...-.+|.+.|.+|++|||.|+|+++..
T Consensus 7 ~~e~Ii~r~~e~I~~A~~el~lsi~-------------~e~l~~l~~~L~~A~~rGV~V~liv~~~ 59 (233)
T 2f5t_X 7 SFDEAIEMFRESLYSAKNEVIVVTP-------------SEFFETIREDLIKTLERGVTVSLYIDKI 59 (233)
T ss_dssp CHHHHHHHHHHHHHTCSSEEEEEEC-------------GGGHHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CHHHHHHHHHHHHHHhhhEEEEEeC-------------HHHHHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 4456789999999999999999543 2345889999999999999999999754
No 110
>2c1l_A Restriction endonuclease; BFII, domain fusion, hydrolase; HET: TAR TLA SRT MES; 1.9A {Bacillus firmus}
Probab=91.90 E-value=0.26 Score=52.05 Aligned_cols=92 Identities=16% Similarity=0.183 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHcCCceEEEEEecCCCCCCCCCCCCCchhHHHHHHHHHHHHHhhHHHHHHHHHHhcCCCccccccccccc
Q 002219 804 SLYRRILRAYNEKKCFRVIIVIPLLPGFQGGVDDGGAASVRAIMHWQYRTICRGQNSILHNLYALLGPKTHDYISFYGLR 883 (952)
Q Consensus 804 AL~~RI~~A~~~g~~vrV~IvlPl~pgf~g~~~d~~~~~~r~i~~~qy~ti~rg~~si~~~L~~~~Gv~~~~Yi~f~~lr 883 (952)
++..-++++..+|.++.| |+- |.++... +| ....++|.. .|++++-+
T Consensus 52 rfy~~f~~h~~~Ggkv~~--IlG------gstsQrl-TS----------------KQavEElL~-cGvev~Ii------- 98 (358)
T 2c1l_A 52 RFYETFTEHINQGGRVIA--ILG------GSTSQRL-SS----------------RQVVEELLN-RGVEVHII------- 98 (358)
T ss_dssp TTHHHHHHHHHTTCEEEE--EEE------CCSSSCC-BB----------------HHHHHHHHH-TTCEEEEE-------
T ss_pred eecHHHHHHHhcCCcEEE--EEc------ccccccc-cH----------------HHHHHHHHh-cCCceEEe-------
Confidence 444455566678855544 444 3443332 22 345678888 79886432
Q ss_pred ccccccCCCCcccccceeeeeEEEE---eCcEEEEecccCCcCccCCCCCcceEEEEEchhh
Q 002219 884 AYGRLFEDGPVATSQVYVHSKVMII---DDSIALIGSANINDRSLLGSRDSEVSVGLYLFIL 942 (952)
Q Consensus 884 ~~~~~~~~g~~~te~iyvHSKlmIV---DD~~~iIGSANin~RSm~G~rDsEi~v~i~d~~~ 942 (952)
+ ..-.+|+|+-.. |...+||||.|+..--| ..|-|++|++.+..+
T Consensus 99 N------------rkRi~HaK~Yg~~~n~g~~LIV~SgNfT~pGm--sQNvE~sllld~~Tt 146 (358)
T 2c1l_A 99 N------------RKRILHAKLYGTSNNLGESLVVSSGNFTGPGM--SQNIEASLLLDNNTT 146 (358)
T ss_dssp E------------CSSCBCCEEEEEEETTEEEEEEESCCBSTTTT--TTSBEEEEEECHHHH
T ss_pred e------------eeeecchhhhcccCCCceEEEEecCCcccccc--ccceeEEEEEcCCCc
Confidence 1 123689998775 66889999999999999 999999999988764
No 111
>1v5m_A SH2 and PH domain-containing adapter protein APS; adaptor protein, pleckstrin homology domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=82.32 E-value=8.9 Score=36.98 Aligned_cols=82 Identities=20% Similarity=0.267 Sum_probs=48.1
Q ss_pred CCcceEEEEEeCC------eEEEEeCCCCCCccE-EEEEeCCCCCCCCCCCcccccccccccCCcceeEEEEeCce-EEE
Q 002219 245 DNWQKVWAVLKPG------FLALLADPFDTKPMD-IIVFDVLPASDGNGEGRVSLATEVKERNPLRHAFKVTCGVR-SIR 316 (952)
Q Consensus 245 ~rw~kRWfvVKdS------fL~yv~d~~~~~~~~-v~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~r-~l~ 316 (952)
.+|+|.||+++.. +|-|+..|.+.++.- |++++- ++..-.... |.....|.|.|....+ ..+
T Consensus 40 ~~W~k~RLvL~k~g~G~~y~LEfy~PPkssKpK~~i~cs~I---~EVR~tt~L-------EmPD~~nTFVlK~~n~~eyi 109 (136)
T 1v5m_A 40 AQWQKCRLLLRRAVAGERFRLEFFVPPKASRPKVSIPLSAI---IEVRTTMPL-------EMPEKDNTFVLKVENGAEYI 109 (136)
T ss_dssp CCCEEEEEEEEECSSSCCEEEEEESSTTSSSCSSCEETTTC---CBCCCCCCS-------SSCCCTTEECCBCTTSCBEE
T ss_pred cchhheeeEEEEccCCCceEEEEecCCcccCCccccchhhh---hhhhhcccc-------ccCCccceEEEEecCCcEEE
Confidence 5899999999885 334444454444322 222110 000000111 1111246677665545 789
Q ss_pred EEecchhhHHHHHHHHHhcc
Q 002219 317 LRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 317 l~~~s~~~~~~w~~~i~~~~ 336 (952)
|.+.+..++..|.+.|....
T Consensus 110 ~ea~d~~q~~sWla~Ir~C~ 129 (136)
T 1v5m_A 110 LETIDSLQKHSWVADIQGCV 129 (136)
T ss_dssp EECSSHHHHHHHHHHHHHHH
T ss_pred EEcCCHHHHHHHHHHHHhhc
Confidence 99999999999999998754
No 112
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=64.02 E-value=25 Score=39.38 Aligned_cols=78 Identities=14% Similarity=0.145 Sum_probs=52.2
Q ss_pred CcceEEEEEeCCeEEEEeCCCCCC--ccEEEEEeCCCCCCCCCCCcccccccccccCCcceeEEEEeCceEEEEEecchh
Q 002219 246 NWQKVWAVLKPGFLALLADPFDTK--PMDIIVFDVLPASDGNGEGRVSLATEVKERNPLRHAFKVTCGVRSIRLRTRTGA 323 (952)
Q Consensus 246 rw~kRWfvVKdSfL~yv~d~~~~~--~~~v~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~r~l~l~~~s~~ 323 (952)
+++.||++|=+.+|+|.+...+++ ....+-++. +.+... ......++|.|.+..+.+.|.|.|..
T Consensus 257 ~~~~r~~fLF~d~Ll~~k~~~~~~y~~k~~i~L~~-----------l~v~~~--~~~~~~~~f~i~~~~~~~~l~a~s~~ 323 (434)
T 3mpx_A 257 NRRPRHLFLMNDVLLYTYPQKDGKYRLKNTLAVAN-----------MKVSRP--VMEKVPYALKIETSESCLMLSASSCA 323 (434)
T ss_dssp EEEEEEEEEESSEEEEEEECTTSCEEEEEEEEC----------------CCC--CCTTSCSEEEEECSSCEEEEECSSHH
T ss_pred CceEEEEEEECCEEEEEEecCCCeEEEEEEEEcCC-----------cEEEec--CCCCCCeeEEEecCCeEEEEecCCHH
Confidence 356799999999999997433332 111111111 111110 11235789999999999999999999
Q ss_pred hHHHHHHHHHhcc
Q 002219 324 KVRDWVAAINDAG 336 (952)
Q Consensus 324 ~~~~w~~~i~~~~ 336 (952)
....|...|.++.
T Consensus 324 ek~~W~~~i~~ai 336 (434)
T 3mpx_A 324 ERDEWYGCLSRAL 336 (434)
T ss_dssp HHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999976
No 113
>2f5t_X Archaeal transcriptional regulator TRMB; sugar-binding; HET: MAL; 1.45A {Thermococcus litoralis} SCOP: b.38.5.1 d.136.1.5
Probab=63.91 E-value=13 Score=39.09 Aligned_cols=51 Identities=10% Similarity=0.091 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHhccCeEEEEeeeeccCCCCChhHHHHHHHHHHHHHHHHHHcCCceEEEEEecC
Q 002219 762 EESIHCAYCSLIEKAEHFIYIENQFFISGLSGDEIIRNRVLESLYRRILRAYNEKKCFRVIIVIPL 827 (952)
Q Consensus 762 E~sI~~ayl~~I~~A~~~IYIEnqyFis~~~~~~~v~n~I~~AL~~RI~~A~~~g~~vrV~IvlPl 827 (952)
...|.+-..++|++|++.|++. ++.. ....+.++| .+|.++| |.|+|++..
T Consensus 8 ~e~Ii~r~~e~I~~A~~el~ls----i~~e-----~l~~l~~~L----~~A~~rG--V~V~liv~~ 58 (233)
T 2f5t_X 8 FDEAIEMFRESLYSAKNEVIVV----TPSE-----FFETIREDL----IKTLERG--VTVSLYIDK 58 (233)
T ss_dssp HHHHHHHHHHHHHTCSSEEEEE----ECGG-----GHHHHHHHH----HHHHHTT--CEEEEEESS
T ss_pred HHHHHHHHHHHHHHhhhEEEEE----eCHH-----HHHHHHHHH----HHHHHCC--CEEEEEEcC
Confidence 4578888899999999999994 4432 123455555 5899999 777777663
No 114
>1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=60.19 E-value=24 Score=33.86 Aligned_cols=82 Identities=11% Similarity=0.137 Sum_probs=52.8
Q ss_pred cceEEEEEeCCeEEEEeCCCCCCccEEEEEeCCCCCCCCCCCcccccccccccCCcceeEEEEeCc-eEEEEEecchhhH
Q 002219 247 WQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGRVSLATEVKERNPLRHAFKVTCGV-RSIRLRTRTGAKV 325 (952)
Q Consensus 247 w~kRWfvVKdSfL~yv~d~~~~~~~~v~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-r~l~l~~~s~~~~ 325 (952)
-+.|+|+|=++.|+|++ +....-.+++ -..+.+. .+.+-+ ..+..+.+|.|.|.-.. +++.+.|.|....
T Consensus 44 ~~eR~l~LF~~~Ll~~s-~~~~~~~f~~--kgklPL~-----g~~V~~-~ed~~~~~~aFeI~g~~~~~i~v~~~s~eE~ 114 (132)
T 1v61_A 44 KEERYFLLFSSVLIMLS-ASPRMSGFMY--QGKIPIA-----GMVVNR-LDEIEGSDCMFEITGSTVERIVVHCNNNQDF 114 (132)
T ss_dssp CCEEEEEECSSCEEEEE-CSSSSSCCEE--EEEECTT-----TCBCST-TCSSSSSCCCEEEECSSSCEEEECCCCSHHH
T ss_pred ceEEEEEEcCCeEEEEE-ecCCCceEEE--EEEEecc-----eeEEEe-ccccccCccEEEEecCCCceEEEEeCCHHHH
Confidence 35799999999999997 4332111111 1100011 011111 11123568999999766 8999999999999
Q ss_pred HHHHHHHHhccC
Q 002219 326 RDWVAAINDAGL 337 (952)
Q Consensus 326 ~~w~~~i~~~~~ 337 (952)
.+|..+|..+..
T Consensus 115 ~~Wl~~L~~~i~ 126 (132)
T 1v61_A 115 QEWMEQLNRLTK 126 (132)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh
Confidence 999999998763
No 115
>3ml4_A Protein DOK-7; tyrosine phosphorylation, adapter protein, dimerization, SIG protein; HET: PTR; 2.60A {Mus musculus}
Probab=59.93 E-value=30 Score=36.08 Aligned_cols=34 Identities=21% Similarity=0.381 Sum_probs=30.4
Q ss_pred cceeEEEEeCceEEEEEecchhhHHHHHHHHHhc
Q 002219 302 LRHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDA 335 (952)
Q Consensus 302 ~~~~~~i~~~~r~l~l~~~s~~~~~~w~~~i~~~ 335 (952)
..|.+.|-+....+.|-|.+...+..|...|...
T Consensus 78 ~s~TlAIIc~d~~~vLAFds~e~l~~W~~~l~~s 111 (224)
T 3ml4_A 78 LAHTLAIICLSQAVMLGFDSHEAMCAWDTRIRYA 111 (224)
T ss_dssp EEEEEEEEESSCEEEEECSSHHHHHHHHHHHHHH
T ss_pred cccEEEEEecCcEEEEEeCCHHHHHHHHHHHhhc
Confidence 3688999999999999999999999999998864
No 116
>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*
Probab=50.14 E-value=86 Score=28.85 Aligned_cols=78 Identities=15% Similarity=0.231 Sum_probs=51.7
Q ss_pred eEEEEEeCCeEEEEeCC-C-CCCccEEEEEeCCCCCCCCCCCcccccccccccCCcceeEEEEeCceEEEEEecchhhHH
Q 002219 249 KVWAVLKPGFLALLADP-F-DTKPMDIIVFDVLPASDGNGEGRVSLATEVKERNPLRHAFKVTCGVRSIRLRTRTGAKVR 326 (952)
Q Consensus 249 kRWfvVKdSfL~yv~d~-~-~~~~~~v~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~r~l~l~~~s~~~~~ 326 (952)
+++|.|=+..|+|.... . .++...+-.++-. .+.+.. +++....++.|+|..+.++..+.|.+...-.
T Consensus 27 ~v~~FLfND~Ll~a~~~~~~~~~~~~~~~~~L~---------~~~v~d-~~d~~~~~n~f~i~~~~~s~~~~aes~~eK~ 96 (113)
T 1zc3_B 27 RVHGFLMNDCLLVATWLPQRRGMYRYNALYPLD---------RLAVVN-VKDNPPMKDMFKLLMFPESRIFQAENAKIKR 96 (113)
T ss_dssp EEEEEEESSEEEEEEEECCTTSCEEEEEEEETT---------TCEEEE-ECCBTTBSSEEEEEETTEEEEEECSSHHHHH
T ss_pred cEEEEecCCEEEEEEEeccCcccEEEEEEEEcc---------cCEEEE-CCCCcccceEEEEEeCCceEEEEcCCHHHHH
Confidence 57888888888888631 1 1222333333321 122211 1223357899999999999999999999999
Q ss_pred HHHHHHHhcc
Q 002219 327 DWVAAINDAG 336 (952)
Q Consensus 327 ~w~~~i~~~~ 336 (952)
+|..+|+++.
T Consensus 97 ~Wl~~~~~a~ 106 (113)
T 1zc3_B 97 EWLEVLEETK 106 (113)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998753
No 117
>1q32_A TDP1P;, tyrosyl-DNA phosphodiesterase; DNA repair, replication, transcription, hydrolase, replication,transcription, hydrolase; 2.03A {Saccharomyces cerevisiae} SCOP: d.136.1.3 d.136.1.3
Probab=40.91 E-value=15 Score=43.14 Aligned_cols=41 Identities=20% Similarity=0.192 Sum_probs=29.3
Q ss_pred CCCeEEEEcCCCcCCCcccccCcceEEEE---eC-CeEEEccccCCCCCc
Q 002219 455 HENVRVLRYPDHFASGVYLWSHHEKLVIV---DY-QICFIGGLDLCFGRY 500 (952)
Q Consensus 455 ~~gI~V~r~P~~~~~~~~~~rhHrKivVI---Dg-~vAFvGGiNL~~gRw 500 (952)
.+||.+...|.. . +.+||-||+|. |+ -...|-+.||...-|
T Consensus 165 ~~nv~l~~p~mp----~-fGthHSKmmlL~y~dg~lRVVI~TANLi~~DW 209 (544)
T 1q32_A 165 LKKVKLIEITMP----P-FASHHTKLIINFYDNGECKIFLPSNNFTSMET 209 (544)
T ss_dssp HTTEEEEEECCC----T-TCCBCCCEEEEEESTTEEEEEEESSCBSHHHH
T ss_pred CCCeEEEeCCCC----C-CCCCCceeEEEEecCCCEEEEEeCCCCChHHh
Confidence 479998754421 2 57999999998 56 667888999964333
No 118
>3t06_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; DH-PH RHOA complex, pdzrhogef, guanine nucleotide exchange F RHOA, signaling protein; 2.84A {Homo sapiens}
Probab=36.52 E-value=1.4e+02 Score=33.05 Aligned_cols=89 Identities=18% Similarity=0.227 Sum_probs=52.0
Q ss_pred CcceEEEEEeCCeEEEEeCCCCCCccEEEEEeCCC----CCCCC--CCCccccccc-ccccCCcceeEEEEeCc-----e
Q 002219 246 NWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLP----ASDGN--GEGRVSLATE-VKERNPLRHAFKVTCGV-----R 313 (952)
Q Consensus 246 rw~kRWfvVKdSfL~yv~d~~~~~~~~v~l~D~~~----~~~~~--~~~~~~~~~~-~~~~~~~~~~~~i~~~~-----r 313 (952)
+++.+|++|=+.+|+|++.. +++ .++ .+... ....+ ....+.+..- +.+..+...+|.|.+.. +
T Consensus 309 ~~~~~~~fLF~d~Ll~~k~~-~~k--~~~-~~~~~~~~~~~~~~~~~k~~i~l~~~~v~~~~~~~~~f~l~~~~~~~~~~ 384 (418)
T 3t06_A 309 KTLDLHVLLLEDLLVLLQKQ-DEK--LLL-KCHSKTAVGSSDSKQTFSPVLKLNAVLIRSVATDKRAFFIICTSKLGPPQ 384 (418)
T ss_dssp BCCEEEEEEESSEEEEEEEC-SSC--EEC-CC-------------CCCSEEEGGGEEEEECSSCSSEEEEEECCSSSTTC
T ss_pred CeEEEEEEecCCEEEEEEEc-CCc--eEE-eecccccccCCCcccccCCceechhceeccccccCceEEEEecCCCCCce
Confidence 46689999999999999743 221 111 00000 00000 0112222221 12222345678777642 7
Q ss_pred EEEEEecchhhHHHHHHHHHhccCC
Q 002219 314 SIRLRTRTGAKVRDWVAAINDAGLR 338 (952)
Q Consensus 314 ~l~l~~~s~~~~~~w~~~i~~~~~~ 338 (952)
.+.|.|.|...-..|...|.++...
T Consensus 385 ~~~l~A~s~~ek~~W~~~I~~a~~~ 409 (418)
T 3t06_A 385 IYELVALTSSDKNTWMELLEEAVRN 409 (418)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred EEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 8999999999999999999997643
No 119
>1jy1_A TDP1, tyrosyl-DNA phosphodiesterase; PLD superfamily, hydrolase; 1.69A {Homo sapiens} SCOP: d.136.1.3 d.136.1.3 PDB: 1rff_A* 1mu9_A 1nop_A 1mu7_A* 1rfi_A* 1rg1_A* 1rg2_A* 1rgt_A* 1rgu_A* 1rh0_A* 1qzq_A
Probab=29.24 E-value=34 Score=39.48 Aligned_cols=43 Identities=16% Similarity=0.226 Sum_probs=31.6
Q ss_pred cCCCeEEEEcCCCcCCCcccccCcceEEEE---eCCeEEEccccCCCCCc
Q 002219 454 IHENVRVLRYPDHFASGVYLWSHHEKLVIV---DYQICFIGGLDLCFGRY 500 (952)
Q Consensus 454 l~~gI~V~r~P~~~~~~~~~~rhHrKivVI---Dg~vAFvGGiNL~~gRw 500 (952)
..+||.+...|.. ..+.+||-||+|. |+-...|-+.||...-|
T Consensus 100 ~~~nv~~~~p~mp----~~fGthHsKmmiL~y~~glRVVI~TANL~~~DW 145 (464)
T 1jy1_A 100 PYENISLCQAKLD----IAFGTHHTKMMLLLYEEGLRVVIHTSNLIHADW 145 (464)
T ss_dssp TCTTEEEEECCCC----STTCCBCCCEEEEEESSCEEEEEECCCBSGGGG
T ss_pred cCCCeEEEeCCCC----CcccccchhhheeecCCceEEEEeCCCCChhHh
Confidence 4689998754322 2356899999998 67778899999975544
No 120
>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1
Probab=27.50 E-value=1.5e+02 Score=27.59 Aligned_cols=35 Identities=14% Similarity=0.287 Sum_probs=30.4
Q ss_pred cceeEEEEeCc--eEEEEEecchhhHHHHHHHHHhcc
Q 002219 302 LRHAFKVTCGV--RSIRLRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 302 ~~~~~~i~~~~--r~l~l~~~s~~~~~~w~~~i~~~~ 336 (952)
....|.|..++ +.|-|.|.|...+..|...|+...
T Consensus 84 ~~~~FsIiy~~~~k~LdlvA~s~~e~~~Wv~gL~~L~ 120 (131)
T 1mai_A 84 EDRCFSIVFKDQRNTLDLIAPSPADAQHWVQGLRKII 120 (131)
T ss_dssp GGGEEEEEESSSCCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred ccceEEEEECCCCceEEEEeCCHHHHHHHHHHHHHHH
Confidence 45688888887 599999999999999999998765
No 121
>3qwm_A Iqsec1, IQ motif and SEC7 domain-containing protein 1; structural genomics, structural genomics consortium, SGC; 2.39A {Homo sapiens}
Probab=25.08 E-value=3.8e+02 Score=25.89 Aligned_cols=76 Identities=8% Similarity=0.061 Sum_probs=48.4
Q ss_pred cceEEEEEeCCeEEEEeCCCC-----C--CccEEEEEeCCCCCCCCCCCcccccccccccCCcceeEEEEeC------ce
Q 002219 247 WQKVWAVLKPGFLALLADPFD-----T--KPMDIIVFDVLPASDGNGEGRVSLATEVKERNPLRHAFKVTCG------VR 313 (952)
Q Consensus 247 w~kRWfvVKdSfL~yv~d~~~-----~--~~~~v~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~------~r 313 (952)
-+.|.|.|=+..|+|.+ |.. + +....+-++ + +.+.. -+.....|||+|.+. .+
T Consensus 33 ~qqR~~FLFND~LL~TK-~~~kkk~~~~Y~vr~~~~L~---------g--m~V~~--~e~e~~p~~~~l~s~~~G~~~k~ 98 (140)
T 3qwm_A 33 LHQREIFLFNDLLVVTK-IFQKKKNSVTYSFRQSFSLY---------G--MQVLL--FENQYYPNGIRLTSSVPGADIKV 98 (140)
T ss_dssp TTEEEEEEESSCEEEEE-CCC---CCCCCCCEEEECCT---------T--EEEEE--ECCSSCTTEEEEEECCTTSCCEE
T ss_pred ccceEEEEecchhhhee-ecccCCCCCceEEEEEeeec---------c--eEEEc--ccCCCCceEEEEEecCCCCcceE
Confidence 45788888888888885 221 1 122222111 1 11111 122346799999974 26
Q ss_pred EEEEEecchhhHHHHHHHHHhcc
Q 002219 314 SIRLRTRTGAKVRDWVAAINDAG 336 (952)
Q Consensus 314 ~l~l~~~s~~~~~~w~~~i~~~~ 336 (952)
.+.+.+.+.....+|...|.++.
T Consensus 99 ~i~~~A~s~~ER~rwi~dL~esI 121 (140)
T 3qwm_A 99 LINFNAPNPQDRKKFTDDLRESI 121 (140)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHHHH
Confidence 79999999999999998887753
No 122
>2lg1_A A-kinase anchor protein 13; metal binding protein; NMR {Homo sapiens}
Probab=22.86 E-value=2e+02 Score=28.59 Aligned_cols=82 Identities=20% Similarity=0.229 Sum_probs=47.2
Q ss_pred CcceEEEEEeCCeEEEEeCCCCCCccEEEEEeCCCCCCCCCCCccccccc-ccccCCcceeEEEEe----CceEEEEEec
Q 002219 246 NWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGRVSLATE-VKERNPLRHAFKVTC----GVRSIRLRTR 320 (952)
Q Consensus 246 rw~kRWfvVKdSfL~yv~d~~~~~~~~v~l~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~----~~r~l~l~~~ 320 (952)
++..++++|=+.+|+|+. +.+.+ .+ +.+... ...-+.+..- +.+......+|.+.. |.+.+.|.|.
T Consensus 85 ~~~d~~~fLf~D~Ll~~~-~~~~k--y~-~~~~~~-----~~pvi~L~~~~vre~a~d~~~~fli~~~~~g~~~yel~a~ 155 (185)
T 2lg1_A 85 RLKEVQAVLLTDILVFLQ-EKDQK--YI-FASLDQ-----KSTVISLKKLIVREVAHEEKGLFLISMGMTDPEMVEVHAS 155 (185)
T ss_dssp CEEEEEEEEESSEEECCE-EETTE--EE-CCCCSS-----SCSEEESSSCEEECCSSCSSEEEEECCSSSCCCCEEEECS
T ss_pred CeeeEEEEeecCEEEEEE-ecCCE--EE-EEcccC-----CCCeEeecceEEeccCCCCCeEEEEEecCCCCeEEEEEcC
Confidence 467899999999999985 33221 11 111100 0011111110 111111234665554 3579999999
Q ss_pred chhhHHHHHHHHHhcc
Q 002219 321 TGAKVRDWVAAINDAG 336 (952)
Q Consensus 321 s~~~~~~w~~~i~~~~ 336 (952)
|...-..|...|..+.
T Consensus 156 s~~er~~W~~~I~~Ai 171 (185)
T 2lg1_A 156 SKEERNSWIQIIQDTI 171 (185)
T ss_dssp SHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHH
Confidence 9999999999998865
Done!