Your job contains 1 sequence.
>002224
MAADVIITDSGAMHVAGVPIVNPSTVVVWEVTPGPGNGFQAAPKTTTSNGVPPSLSPPKW
AGFAPLAAYLFSWQEYLLSEAKQGRKLTDQNFSDAITLHCSPVSNFSAYVSPEAAAQSAA
TTTWGSGVTAVAFDPTRGGSVIAVVIVEGQYMSPYDPDEGPSITGWRVQRWESSVQPVVL
HQIFGNPTSSFGGQAPMQTVWVSKVDTSIPTSNFKIHQLAAAGPTCDVWKTTDSGLEKSK
IVSFDPFDLPSDIRSLARIVYSAHGGEIAIALLRGGVHIFSGPNFAPVDNYQISVGSAIA
APAFSSTSCCSASVWHDTNKDRTILKIIRVLPPAVPSSQVKANSSTWERAIAERFWWSLL
VNVDWWDAVGCTQSAAEDGIVSLNSVIAVLDADFHSLPSIQHRQQYGPSLDRIKCRLLEG
TNAQEVRAMVLDMQARLLLDMLGKGIESALINPSALVPDPWQASGETLSGIDPEAMAVEP
ALVASIQAYVDAVLDLASHFITRLRRYASFCRTLASHAVTAGTGSNRNMVASPTQSSATP
AASQAGQSGTTSSTGSTQMQAWVQGAIAKISSTNDGVSNPTSNPISGPSSFMPISINTGT
FPGTPAVRLIGDCHFLHRLCQLLLFCFFFRRAQQPRLLANAQRNNDANVQKPQVSAPGKV
EEINSVPGKPTSAMVKLDEGQVARAGQTVPGAKGVEEGPAGRPKMGFGNAGQGYTFEEVK
VLFLILMDLCRRTAALSHPLPVSQVGSSNIQVRLHYIDGNYTVLPEVVEASLGPHMQNMP
RPRGADAAGLLLRELELHPPAEEWHRRNMFGGPWSDPEDVGPVDDTPKLSNWVDSVDVNS
SGNHDVYYDSHGLWPRKRRMSERDAAFGLNTSVGLGAYLGIMGSRRDVVTAVWKTGLEGV
WYKCIRCLRQTAAFASPGATNPPNQNDREAWWISRWAFGCPMCGGTWVRVV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 002224
(951 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2135383 - symbol:SFR6 "AT4G04920" species:3702... 3584 0. 1
DICTYBASE|DDB_G0279157 - symbol:med16 "putative mediator ... 99 9.7e-05 2
>TAIR|locus:2135383 [details] [associations]
symbol:SFR6 "AT4G04920" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009631 "cold acclimation"
evidence=IMP] [GO:0006970 "response to osmotic stress"
evidence=IMP] [GO:0032922 "circadian regulation of gene expression"
evidence=IMP] [GO:0048586 "regulation of long-day photoperiodism,
flowering" evidence=IMP] [GO:0007155 "cell adhesion" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0016926 "protein desumoylation" evidence=RCA]
[GO:0045010 "actin nucleation" evidence=RCA] [GO:0048765 "root hair
cell differentiation" evidence=RCA] [GO:0050665 "hydrogen peroxide
biosynthetic process" evidence=RCA] [GO:0071555 "cell wall
organization" evidence=RCA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0010104 "regulation
of ethylene mediated signaling pathway" evidence=IMP] [GO:1901672
"positive regulation of systemic acquired resistance" evidence=IMP]
[GO:2000022 "regulation of jasmonic acid mediated signaling
pathway" evidence=IMP] EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006355 EMBL:AL161502 GO:GO:0006351 GO:GO:0006970
GO:GO:0032922 GO:GO:0016592 IPI:IPI00526565 IPI:IPI00992086
PIR:H85061 RefSeq:NP_001190676.1 RefSeq:NP_192401.5
UniGene:At.21855 PRIDE:F4JGZ1 EnsemblPlants:AT4G04920.1
GeneID:825831 KEGG:ath:AT4G04920 TAIR:At4g04920 eggNOG:NOG238605
InParanoid:Q9M0Y7 OMA:SWQCEHE ArrayExpress:F4JGZ1 GO:GO:1901672
GO:GO:0010104 GO:GO:2000022 GO:GO:0048586 Uniprot:F4JGZ1
Length = 1278
Score = 3584 (1266.7 bits), Expect = 0., P = 0.
Identities = 704/968 (72%), Positives = 768/968 (79%)
Query: 1 MAADVIITDSGAMHVAGVPIVNPSTVVVWEVTPGPGNGFQAAPKTTTSNGVPPSLSPPKW 60
MAAD IITDSGAMHVAGVPIVNPST+VVWEVTPGPGNG QA PK +T + VPPSLS W
Sbjct: 319 MAADAIITDSGAMHVAGVPIVNPSTIVVWEVTPGPGNGLQATPKISTGSRVPPSLSSSSW 378
Query: 61 AGFAPLAAYLFSWQEYLLSEAKQGRKLTDQNFSDAITLHCSPVSNFSAYVSPEAAAQSAA 120
GFAPLAAYLFSWQEYL+SE KQG+K +DQ+ SDAI+L CSPVSNFSAYVSPEAAAQSAA
Sbjct: 379 TGFAPLAAYLFSWQEYLISEIKQGKKPSDQDSSDAISLSCSPVSNFSAYVSPEAAAQSAA 438
Query: 121 TTTWGSGVTAVAFDPTRGGSVIAVVIVEGQYMSPYDPDEGPSITGWRVQRWESSVQPVVL 180
TTTWGSGVTAVAFDPTRGGSVIAVVIVEGQYMSPYDPDEGPSITGWRVQRWESSVQPVVL
Sbjct: 439 TTTWGSGVTAVAFDPTRGGSVIAVVIVEGQYMSPYDPDEGPSITGWRVQRWESSVQPVVL 498
Query: 181 HQIFGNPTSSFGGQAPMQTVWVSKVDTSIP-TSNFKIHQLAAAGPTCDVWKTTDSGLEKS 239
HQIFGNPTS+FGGQ P QTVWVS+VD SIP T +FK HQ+AAAGP+ D K DSG EK+
Sbjct: 499 HQIFGNPTSNFGGQVPTQTVWVSRVDMSIPPTKDFKNHQVAAAGPSVDAPKEPDSGDEKA 558
Query: 240 KIVSFDPFDLPSDIRSLARIVYSAHGGEIAIALLRGGVHIFSGPNFAPVDNYQISVGSAI 299
V FDPFDLPSDIR+LARIVYSAHGGEIAIA LRGGVHIFSGP F+PV+NYQI+VGSAI
Sbjct: 559 NKVVFDPFDLPSDIRTLARIVYSAHGGEIAIAFLRGGVHIFSGPTFSPVENYQINVGSAI 618
Query: 300 AAPAFSSTSCCSASVWHDTNKDRTILKIIRVLPPAVPSSQVKANSSTWERAIAERFWWSL 359
AAPAFS TSCCSASVWHD KD +LKIIRVLPPA+P +Q K + STWERAIAERFWWSL
Sbjct: 619 AAPAFSPTSCCSASVWHDAAKDCAMLKIIRVLPPALPRNQSKVDQSTWERAIAERFWWSL 678
Query: 360 LVNVDWWDAVGCTQSAAEDGIVSLNSVIAVLDADFHSLPSIQHRQQYGPSLDRIKCRLLE 419
LV VDWWDAVGCTQSAAEDGIVSLNSVIAV+DADFHSLPS QHRQQYGP+LDRIKCRLLE
Sbjct: 679 LVGVDWWDAVGCTQSAAEDGIVSLNSVIAVMDADFHSLPSTQHRQQYGPNLDRIKCRLLE 738
Query: 420 GTNAQEVRAMVLDMQARLLLDMLGKGIESALINPSALVPDPWQASGETLSGIDPEAMAVE 479
GTNAQEVRAMVLDMQARLLLDMLGKGIESAL+NPSALV +PW+ GET++GI+PEAMAV+
Sbjct: 739 GTNAQEVRAMVLDMQARLLLDMLGKGIESALVNPSALVFEPWRVDGETITGINPEAMAVD 798
Query: 480 PALVASIQAYVDAVLDLASHFITRLRRYASFCRTLASHAVTAGTGSNRNMVXXXXXXXXX 539
PALV+SIQAYVDAVLDLASHFITRLRRYASFCRTLASHA +AGTGSNRN V
Sbjct: 799 PALVSSIQAYVDAVLDLASHFITRLRRYASFCRTLASHAASAGTGSNRNNVTSPTQNASS 858
Query: 540 XXXXXX-------------XXXXXXXXXXXXXXXXWVQGAI-AKIS--STNDGVSNPTSN 583
VQ + I+ S+++ SN T++
Sbjct: 859 PATPQVFPDKSLYLAVGQPTTTTTTTATTNSSGSSHVQAWMQGAIAKISSSNDGSNSTAS 918
Query: 584 PISGPSSFMPISINTGTFPGTPAVRLIGDXXXXXXXXXXXXXXXXXXXXXXPRLLANAQR 643
PISG +FMPISINTGTFPGTPAVRLIGD P QR
Sbjct: 919 PISGSPTFMPISINTGTFPGTPAVRLIGDCHFLHRLCQLLLFCFLQRSSRFP------QR 972
Query: 644 NNDANVQKPQVSAPGKVEEINSVPGKPTSAMVKLDEGQVARAGQTVPGAKGVEEGPAGRP 703
N D + QK Q A K+EE+NS KPT A+ ++++ Q R Q G KG++E A
Sbjct: 973 NADVSSQKLQTGATSKLEEVNSA--KPTPALNRIEDAQGFRGAQLGTGVKGIDENSARTT 1030
Query: 704 KMGFGNAGQGYTFEEVKVLFLILMDLCRRTAALSHPLPVSQVGSSNIQVRLHYIDGNYTV 763
KMG GNAGQGYT+EEV+VLF ILMDLC+RT+ L+HPLP SQVGS NIQVRLHYIDGNYTV
Sbjct: 1031 KMGSGNAGQGYTYEEVRVLFHILMDLCKRTSGLAHPLPGSQVGSGNIQVRLHYIDGNYTV 1090
Query: 764 LPEVVEASLGPHMQNMPRPRGADAAGLLLRELELHPPAEEWHRRNMFGGPWSDPEDVGPV 823
LPEVVEA+LGPHMQNMPRPRGADAAGLLLRELELHPP+EEWHRRN+FGGP S+PED+
Sbjct: 1091 LPEVVEAALGPHMQNMPRPRGADAAGLLLRELELHPPSEEWHRRNLFGGPGSEPEDMILT 1150
Query: 824 DDTPKLXXXXXXXXXXXXXXXXXYYDSHGLWPRKRRMSERDAAFGLNTSVGLGAYLGIMG 883
DD KL Y H LWPRKRRMSERDAAFG NTSVGLGAYLGIMG
Sbjct: 1151 DDVSKLSNSLDLPDTNFSGICDGYNRVHSLWPRKRRMSERDAAFGSNTSVGLGAYLGIMG 1210
Query: 884 SRRDVVTAVWKTGLEGVWYKCIRCLRQTAAFASPGATNPPNQNDREAWWISRWAFGCPMC 943
SRRDVVTA WKTGLEGVWYKCIRCLRQT+AFASPGAT PN N+RE WW SRW + CPMC
Sbjct: 1211 SRRDVVTATWKTGLEGVWYKCIRCLRQTSAFASPGATKQPNPNERETWWTSRWVYCCPMC 1270
Query: 944 GGTWVRVV 951
GGTWVRVV
Sbjct: 1271 GGTWVRVV 1278
>DICTYBASE|DDB_G0279157 [details] [associations]
symbol:med16 "putative mediator complex subunit 16"
species:44689 "Dictyostelium discoideum" [GO:0016592 "mediator
complex" evidence=ISS] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0279157 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GenomeReviews:CM000152_GR
GO:GO:0006366 EMBL:AAFI02000027 GO:GO:0016592 RefSeq:XP_641853.2
EnsemblProtists:DDB0266902 GeneID:8621898 KEGG:ddi:DDB_G0279157
eggNOG:NOG319671 OMA:RIVSGME Uniprot:Q54X75
Length = 1284
Score = 99 (39.9 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 36/127 (28%), Positives = 59/127 (46%)
Query: 343 NSSTWERAIAERFWWSLLVNVDWWDAVGCTQ--SAAEDGIVSLNSVIAVLDADFHSLPSI 400
N + +A+ F S+L + DWWD + + S + D + + I L +DF LP +
Sbjct: 724 NQKVVSKWLAQLFQNSMLKSNDWWDILILLKIYSTSPDTRTTFHHTIIHLSSDFSCLP-L 782
Query: 401 QHRQQYGPSLDRIKCRLLEGTNAQEVRAMVLDMQARLLLDMLGKGIESALINPSALVPDP 460
+Q Y D IK + + EV A V D QA+ + L ++S+ +P + P
Sbjct: 783 TFQQTYRHCFDAIKASIYRIVSGMEV-AFV-DSQAKSFIYYLCDTLKSSF-SPLLMQPSQ 839
Query: 461 WQASGET 467
Q+ G T
Sbjct: 840 -QSDGTT 845
Score = 88 (36.0 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 21/71 (29%), Positives = 33/71 (46%)
Query: 878 YLGIMGSRRDVVTAV-WKTGLEGVWYKCIRCLRQTAAFASPGATNPPNQNDREAWWISRW 936
Y+GI+ D++T + ++ + KCIRC R T + +W RW
Sbjct: 1133 YMGIV---HDIITRIPIAPRIDKPYKKCIRCHRITVMLRT------------SMFWSDRW 1177
Query: 937 AFGCPMCGGTW 947
+ CP+CGG W
Sbjct: 1178 SMACPICGGKW 1188
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.132 0.412 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 951 881 0.00086 122 3 11 22 0.41 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 2
No. of states in DFA: 636 (68 KB)
Total size of DFA: 464 KB (2215 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 73.41u 0.12s 73.53t Elapsed: 00:00:03
Total cpu time: 73.41u 0.12s 73.53t Elapsed: 00:00:03
Start: Sat May 11 04:07:28 2013 End: Sat May 11 04:07:31 2013