Query 002230
Match_columns 950
No_of_seqs 559 out of 3492
Neff 8.2
Searched_HMMs 46136
Date Thu Mar 28 19:26:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002230.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002230hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0204 Calcium transporting A 100.0 4E-215 9E-220 1794.3 70.4 923 4-949 2-939 (1034)
2 KOG0202 Ca2+ transporting ATPa 100.0 4E-147 9E-152 1245.1 59.0 810 119-948 7-896 (972)
3 TIGR01517 ATPase-IIB_Ca plasma 100.0 7E-142 2E-146 1328.2 94.2 846 92-948 14-871 (941)
4 TIGR01523 ATPase-IID_K-Na pota 100.0 8E-135 2E-139 1262.6 90.2 798 119-948 10-960 (1053)
5 TIGR01106 ATPase-IIC_X-K sodiu 100.0 9E-132 2E-136 1240.3 90.9 808 118-948 19-914 (997)
6 TIGR01522 ATPase-IIA2_Ca golgi 100.0 5E-131 1E-135 1223.8 90.8 778 119-948 7-810 (884)
7 COG0474 MgtA Cation transport 100.0 3E-132 7E-137 1229.0 77.2 787 123-948 32-841 (917)
8 PRK15122 magnesium-transportin 100.0 1E-127 2E-132 1187.3 85.4 765 120-948 31-828 (903)
9 PRK10517 magnesium-transportin 100.0 4E-127 8E-132 1180.1 82.8 759 120-949 53-829 (902)
10 TIGR01524 ATPase-IIIB_Mg magne 100.0 2E-126 4E-131 1175.4 87.3 758 119-948 18-793 (867)
11 TIGR01116 ATPase-IIA1_Ca sarco 100.0 2E-125 4E-130 1176.2 86.0 770 167-948 1-846 (917)
12 TIGR01647 ATPase-IIIA_H plasma 100.0 3E-118 7E-123 1089.2 82.0 718 135-948 1-726 (755)
13 TIGR01657 P-ATPase-V P-type AT 100.0 1E-114 3E-119 1092.7 75.7 751 133-948 137-998 (1054)
14 KOG0203 Na+/K+ ATPase, alpha s 100.0 4E-116 9E-121 989.9 38.3 804 117-946 40-934 (1019)
15 TIGR01652 ATPase-Plipid phosph 100.0 1E-106 2E-111 1024.2 66.9 733 150-909 1-935 (1057)
16 PLN03190 aminophospholipid tra 100.0 5E-100 1E-104 951.7 75.5 735 148-909 85-1038(1178)
17 PRK14010 potassium-transportin 100.0 2.1E-92 4.5E-97 833.6 59.4 547 169-833 28-585 (673)
18 PRK01122 potassium-transportin 100.0 4.9E-91 1.1E-95 822.6 62.8 543 169-826 29-581 (679)
19 KOG0208 Cation transport ATPas 100.0 2E-88 4.4E-93 776.6 54.5 754 133-944 158-1044(1140)
20 TIGR01497 kdpB K+-transporting 100.0 3.3E-87 7.2E-92 788.0 60.5 545 169-826 28-583 (675)
21 COG2217 ZntA Cation transport 100.0 2.5E-88 5.5E-93 798.5 47.7 653 41-834 12-682 (713)
22 KOG0206 P-type ATPase [General 100.0 2.4E-88 5.2E-93 816.4 30.0 737 146-909 28-961 (1151)
23 KOG0210 P-type ATPase [Inorgan 100.0 2.8E-82 6.1E-87 697.7 37.7 713 145-907 74-945 (1051)
24 KOG0205 Plasma membrane H+-tra 100.0 6.9E-82 1.5E-86 691.8 39.7 637 117-826 19-659 (942)
25 PRK11033 zntA zinc/cadmium/mer 100.0 7.3E-80 1.6E-84 749.5 58.0 641 42-834 64-711 (741)
26 KOG0207 Cation transport ATPas 100.0 4.5E-80 9.8E-85 709.7 40.4 668 42-833 157-867 (951)
27 TIGR01494 ATPase_P-type ATPase 100.0 7E-77 1.5E-81 701.2 55.3 492 209-862 5-498 (499)
28 TIGR01511 ATPase-IB1_Cu copper 100.0 5.5E-75 1.2E-79 688.9 56.4 530 160-835 2-550 (562)
29 TIGR01525 ATPase-IB_hvy heavy 100.0 4.6E-75 1E-79 691.9 54.1 512 200-835 18-531 (556)
30 PRK10671 copA copper exporting 100.0 2.9E-74 6.4E-79 714.5 58.9 654 42-832 110-793 (834)
31 TIGR01512 ATPase-IB2_Cd heavy 100.0 1.2E-73 2.6E-78 675.4 56.5 502 179-834 5-509 (536)
32 KOG0209 P-type ATPase [Inorgan 100.0 3.5E-71 7.5E-76 620.7 41.9 740 134-941 161-1067(1160)
33 COG2216 KdpB High-affinity K+ 100.0 2.3E-59 4.9E-64 504.7 37.6 483 218-811 84-569 (681)
34 PF00122 E1-E2_ATPase: E1-E2 A 100.0 1.1E-33 2.4E-38 300.8 23.4 224 207-446 3-230 (230)
35 PF00702 Hydrolase: haloacid d 99.9 3E-23 6.5E-28 217.9 10.4 97 648-770 115-215 (215)
36 KOG4383 Uncharacterized conser 99.7 2.6E-14 5.7E-19 159.3 36.3 289 582-875 698-1149(1354)
37 PF00689 Cation_ATPase_C: Cati 99.7 1.4E-16 3.1E-21 163.0 7.3 109 840-948 1-112 (182)
38 COG4087 Soluble P-type ATPase 99.5 4.9E-14 1.1E-18 127.7 10.9 126 649-803 19-146 (152)
39 PF12515 CaATP_NAI: Ca2+-ATPas 99.5 3.5E-15 7.5E-20 110.5 2.3 46 4-50 1-46 (47)
40 PF13246 Hydrolase_like2: Puta 99.5 3E-14 6.6E-19 127.3 8.5 86 507-593 2-90 (91)
41 PRK10513 sugar phosphate phosp 99.1 2.9E-10 6.3E-15 124.0 13.1 68 736-804 195-265 (270)
42 PF00690 Cation_ATPase_N: Cati 99.1 1.7E-10 3.7E-15 97.7 7.0 68 117-186 2-69 (69)
43 PRK15126 thiamin pyrimidine py 99.1 8.1E-10 1.8E-14 120.6 12.3 144 660-804 19-259 (272)
44 COG0561 Cof Predicted hydrolas 99.1 1.2E-09 2.5E-14 118.9 13.0 144 661-805 21-259 (264)
45 PRK10976 putative hydrolase; P 99.0 2E-09 4.2E-14 117.2 13.1 68 736-804 189-261 (266)
46 PRK11133 serB phosphoserine ph 99.0 1.8E-09 4E-14 119.3 11.9 128 660-803 181-315 (322)
47 TIGR01487 SPP-like sucrose-pho 99.0 2.4E-09 5.2E-14 112.6 12.2 142 660-802 18-214 (215)
48 PRK01158 phosphoglycolate phos 99.0 2.8E-09 6E-14 113.3 12.7 144 660-804 20-226 (230)
49 TIGR02137 HSK-PSP phosphoserin 99.0 2.8E-09 6E-14 110.5 11.3 128 660-806 68-198 (203)
50 PLN02887 hydrolase family prot 99.0 3.6E-09 7.9E-14 125.0 13.0 68 736-804 506-576 (580)
51 smart00831 Cation_ATPase_N Cat 99.0 1.5E-09 3.2E-14 90.5 7.0 62 127-190 2-63 (64)
52 PF08282 Hydrolase_3: haloacid 98.9 4.4E-09 9.6E-14 112.8 10.9 145 658-803 13-254 (254)
53 TIGR01482 SPP-subfamily Sucros 98.9 1.1E-08 2.4E-13 108.4 13.5 143 660-803 15-221 (225)
54 PRK10530 pyridoxal phosphate ( 98.9 1.7E-08 3.7E-13 110.2 13.5 68 736-804 198-268 (272)
55 COG0560 SerB Phosphoserine pho 98.8 1.5E-08 3.2E-13 105.6 11.2 115 659-793 76-201 (212)
56 TIGR00338 serB phosphoserine p 98.8 1.2E-08 2.6E-13 107.7 10.4 128 660-802 85-218 (219)
57 TIGR02726 phenyl_P_delta pheny 98.8 2.2E-08 4.9E-13 100.2 9.5 101 667-797 41-144 (169)
58 TIGR01670 YrbI-phosphatas 3-de 98.8 4.4E-08 9.5E-13 97.2 11.2 98 668-795 36-136 (154)
59 TIGR00099 Cof-subfamily Cof su 98.7 8.2E-08 1.8E-12 103.9 11.4 66 736-802 187-255 (256)
60 TIGR01486 HAD-SF-IIB-MPGP mann 98.7 2.3E-07 5E-12 100.4 14.0 144 661-805 17-254 (256)
61 PRK03669 mannosyl-3-phosphogly 98.6 2.5E-07 5.3E-12 101.0 13.5 145 661-805 25-266 (271)
62 PRK09484 3-deoxy-D-manno-octul 98.6 1.3E-07 2.7E-12 96.7 9.8 108 667-804 55-169 (183)
63 COG1778 Low specificity phosph 98.6 1.9E-07 4.2E-12 88.5 8.1 119 667-815 42-167 (170)
64 PRK13582 thrH phosphoserine ph 98.5 6.7E-07 1.5E-11 93.2 11.3 123 660-803 68-195 (205)
65 PRK00192 mannosyl-3-phosphogly 98.5 1.4E-06 3E-11 95.3 13.9 67 737-804 190-267 (273)
66 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.4 8.9E-07 1.9E-11 91.8 10.0 118 660-788 80-200 (201)
67 TIGR02471 sucr_syn_bact_C sucr 98.3 2E-06 4.2E-11 91.9 10.2 69 736-805 158-233 (236)
68 KOG1615 Phosphoserine phosphat 98.3 1.2E-06 2.6E-11 85.9 7.5 105 660-776 88-199 (227)
69 PLN02954 phosphoserine phospha 98.2 9.2E-06 2E-10 85.9 12.6 125 660-802 84-222 (224)
70 TIGR03333 salvage_mtnX 2-hydro 98.2 7.3E-06 1.6E-10 86.1 11.2 133 659-804 69-209 (214)
71 TIGR01485 SPP_plant-cyano sucr 98.2 9.5E-06 2.1E-10 87.4 12.0 146 658-804 19-244 (249)
72 PRK08238 hypothetical protein; 98.1 0.00018 3.9E-09 84.1 20.9 98 660-782 72-170 (479)
73 PF12710 HAD: haloacid dehalog 98.1 6.7E-06 1.4E-10 84.5 8.0 92 663-767 92-192 (192)
74 COG0546 Gph Predicted phosphat 98.1 2.8E-05 6.1E-10 82.0 11.6 127 658-803 87-217 (220)
75 TIGR02461 osmo_MPG_phos mannos 98.0 2.7E-05 5.8E-10 82.4 10.8 43 658-700 13-55 (225)
76 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.0 1.7E-05 3.8E-10 82.3 9.1 106 658-776 85-197 (202)
77 TIGR01488 HAD-SF-IB Haloacid D 98.0 1.3E-05 2.8E-10 81.3 7.7 97 660-769 73-177 (177)
78 PRK13222 phosphoglycolate phos 98.0 4E-05 8.8E-10 81.0 11.7 126 659-805 92-223 (226)
79 PRK09552 mtnX 2-hydroxy-3-keto 98.0 2.9E-05 6.3E-10 81.9 10.0 130 660-803 74-212 (219)
80 PLN02382 probable sucrose-phos 98.0 5.3E-05 1.1E-09 87.2 12.4 143 661-804 29-257 (413)
81 TIGR01489 DKMTPPase-SF 2,3-dik 98.0 4E-05 8.6E-10 78.5 10.1 115 659-774 71-186 (188)
82 TIGR02463 MPGP_rel mannosyl-3- 97.9 0.0001 2.3E-09 77.7 12.3 39 662-700 18-56 (221)
83 TIGR01454 AHBA_synth_RP 3-amin 97.9 7.8E-05 1.7E-09 77.7 10.5 125 660-803 75-203 (205)
84 cd01427 HAD_like Haloacid deha 97.9 3.9E-05 8.4E-10 73.4 7.6 114 656-770 20-133 (139)
85 PRK10187 trehalose-6-phosphate 97.8 0.00015 3.3E-09 78.7 12.2 137 660-803 36-240 (266)
86 PRK12702 mannosyl-3-phosphogly 97.7 0.00018 3.8E-09 77.2 10.3 43 659-701 17-59 (302)
87 PRK13223 phosphoglycolate phos 97.6 0.00036 7.7E-09 76.1 10.9 124 659-803 100-229 (272)
88 TIGR01449 PGP_bact 2-phosphogl 97.6 0.00032 6.9E-09 73.4 9.6 121 660-801 85-211 (213)
89 PRK13288 pyrophosphatase PpaX; 97.6 0.00039 8.4E-09 73.0 10.2 125 660-803 82-210 (214)
90 PRK14502 bifunctional mannosyl 97.5 0.00037 8E-09 82.8 10.8 40 661-700 434-473 (694)
91 TIGR01484 HAD-SF-IIB HAD-super 97.4 0.00053 1.2E-08 71.3 9.4 116 660-775 17-204 (204)
92 PRK13226 phosphoglycolate phos 97.4 0.00068 1.5E-08 72.0 10.1 127 660-805 95-226 (229)
93 PTZ00174 phosphomannomutase; P 97.4 0.00049 1.1E-08 74.0 8.8 53 736-790 187-244 (247)
94 TIGR01544 HAD-SF-IE haloacid d 97.3 0.0028 6.1E-08 68.3 13.0 134 659-803 120-273 (277)
95 PRK10826 2-deoxyglucose-6-phos 97.3 0.00096 2.1E-08 70.4 9.2 120 659-800 91-216 (222)
96 PRK13225 phosphoglycolate phos 97.3 0.0021 4.6E-08 70.0 11.7 119 660-803 142-267 (273)
97 TIGR01545 YfhB_g-proteo haloac 97.2 0.0024 5.2E-08 66.7 10.4 107 660-776 94-201 (210)
98 TIGR03351 PhnX-like phosphonat 97.2 0.0024 5.2E-08 67.2 10.6 124 659-802 86-218 (220)
99 PRK14501 putative bifunctional 97.1 0.0052 1.1E-07 76.6 14.5 169 612-803 480-720 (726)
100 PRK11590 hypothetical protein; 97.1 0.0036 7.8E-08 65.6 11.0 105 660-776 95-202 (211)
101 TIGR01422 phosphonatase phosph 97.1 0.0031 6.8E-08 68.0 10.8 94 660-772 99-196 (253)
102 PLN03243 haloacid dehalogenase 97.1 0.0034 7.3E-08 67.9 10.9 122 660-800 109-231 (260)
103 PLN02770 haloacid dehalogenase 97.1 0.0034 7.4E-08 67.5 10.9 117 660-793 108-227 (248)
104 PF05116 S6PP: Sucrose-6F-phos 97.1 0.0026 5.6E-08 68.3 9.9 69 736-805 164-244 (247)
105 PRK13478 phosphonoacetaldehyde 97.0 0.0038 8.3E-08 67.9 11.2 122 660-803 101-254 (267)
106 TIGR01548 HAD-SF-IA-hyp1 haloa 97.0 0.0018 3.9E-08 67.0 8.1 94 658-769 104-197 (197)
107 COG4030 Uncharacterized protei 96.9 0.0095 2.1E-07 60.3 11.1 141 660-804 83-262 (315)
108 TIGR01672 AphA HAD superfamily 96.8 0.0032 7E-08 66.7 7.6 88 661-772 115-206 (237)
109 PRK06698 bifunctional 5'-methy 96.7 0.0088 1.9E-07 70.5 11.7 123 660-804 330-454 (459)
110 PRK11587 putative phosphatase; 96.7 0.0095 2.1E-07 62.7 10.1 113 660-793 83-199 (218)
111 smart00775 LNS2 LNS2 domain. T 96.6 0.0093 2E-07 59.2 9.3 103 658-772 25-141 (157)
112 PRK06769 hypothetical protein; 96.6 0.0092 2E-07 60.4 8.9 112 647-774 11-134 (173)
113 PLN02575 haloacid dehalogenase 96.5 0.014 3.1E-07 65.8 10.9 118 660-799 216-337 (381)
114 TIGR01662 HAD-SF-IIIA HAD-supe 96.5 0.014 2.9E-07 56.1 9.1 91 659-772 24-126 (132)
115 PRK11009 aphA acid phosphatase 96.4 0.0082 1.8E-07 63.6 7.6 87 660-772 114-206 (237)
116 TIGR02253 CTE7 HAD superfamily 96.4 0.013 2.9E-07 61.5 9.2 94 660-772 94-190 (221)
117 PRK08942 D,D-heptose 1,7-bisph 96.4 0.021 4.5E-07 58.2 10.1 127 660-803 29-176 (181)
118 TIGR01428 HAD_type_II 2-haloal 96.4 0.012 2.6E-07 60.8 8.5 95 660-773 92-188 (198)
119 TIGR00685 T6PP trehalose-phosp 96.3 0.015 3.2E-07 62.4 9.0 67 732-803 162-239 (244)
120 TIGR01990 bPGM beta-phosphoglu 96.2 0.0084 1.8E-07 61.1 6.1 91 660-772 87-180 (185)
121 PRK14988 GMP/IMP nucleotidase; 96.1 0.017 3.6E-07 61.1 8.2 95 660-773 93-189 (224)
122 TIGR01509 HAD-SF-IA-v3 haloaci 96.1 0.019 4.1E-07 58.2 8.4 94 660-771 85-178 (183)
123 PHA02530 pseT polynucleotide k 96.1 0.012 2.5E-07 65.3 7.3 109 657-773 184-292 (300)
124 PLN02580 trehalose-phosphatase 96.1 0.069 1.5E-06 60.3 13.0 63 736-803 300-373 (384)
125 TIGR02254 YjjG/YfnB HAD superf 96.1 0.021 4.6E-07 60.0 8.6 120 660-801 97-222 (224)
126 PRK09449 dUMP phosphatase; Pro 95.9 0.036 7.7E-07 58.5 9.3 122 660-803 95-222 (224)
127 COG4359 Uncharacterized conser 95.8 0.025 5.5E-07 55.7 7.1 105 660-774 73-183 (220)
128 TIGR02009 PGMB-YQAB-SF beta-ph 95.8 0.016 3.6E-07 58.9 6.3 93 659-772 87-181 (185)
129 TIGR01685 MDP-1 magnesium-depe 95.8 0.053 1.1E-06 54.7 9.4 113 649-774 34-154 (174)
130 PF13419 HAD_2: Haloacid dehal 95.7 0.015 3.2E-07 58.1 5.3 96 658-772 75-172 (176)
131 PLN02940 riboflavin kinase 95.7 0.035 7.5E-07 63.6 8.8 114 660-793 93-212 (382)
132 PLN02779 haloacid dehalogenase 95.6 0.041 8.9E-07 60.5 8.9 120 660-800 144-269 (286)
133 PF06888 Put_Phosphatase: Puta 95.4 0.068 1.5E-06 56.4 9.0 111 660-772 71-194 (234)
134 TIGR01549 HAD-SF-IA-v1 haloaci 95.4 0.044 9.6E-07 54.0 7.2 91 660-770 64-154 (154)
135 COG3769 Predicted hydrolase (H 95.4 0.12 2.7E-06 52.5 10.1 37 664-700 27-63 (274)
136 TIGR01668 YqeG_hyp_ppase HAD s 95.3 0.045 9.7E-07 55.2 7.1 86 659-772 42-131 (170)
137 TIGR00213 GmhB_yaeD D,D-heptos 95.2 0.076 1.6E-06 53.8 8.5 125 661-799 27-174 (176)
138 TIGR01656 Histidinol-ppas hist 95.1 0.055 1.2E-06 53.1 7.0 97 660-773 27-141 (147)
139 COG2179 Predicted hydrolase of 95.1 0.2 4.2E-06 49.1 10.3 110 616-771 20-132 (175)
140 smart00577 CPDc catalytic doma 94.9 0.036 7.8E-07 54.5 4.9 93 659-774 44-139 (148)
141 TIGR02252 DREG-2 REG-2-like, H 94.8 0.079 1.7E-06 54.9 7.5 93 660-772 105-200 (203)
142 PLN02205 alpha,alpha-trehalose 94.8 0.16 3.5E-06 63.8 11.5 77 612-704 584-664 (854)
143 TIGR01533 lipo_e_P4 5'-nucleot 94.6 0.16 3.4E-06 54.9 9.1 87 658-767 116-205 (266)
144 TIGR01459 HAD-SF-IIA-hyp4 HAD- 94.5 0.31 6.7E-06 52.1 11.5 94 653-770 17-115 (242)
145 TIGR01675 plant-AP plant acid 94.4 0.16 3.4E-06 53.4 8.6 87 658-763 118-209 (229)
146 PLN02811 hydrolase 94.2 0.13 2.8E-06 54.2 7.6 97 660-773 78-180 (220)
147 PRK05446 imidazole glycerol-ph 93.9 0.14 3.1E-06 57.5 7.6 98 659-773 29-144 (354)
148 TIGR01261 hisB_Nterm histidino 93.6 0.13 2.8E-06 51.4 5.7 98 660-774 29-144 (161)
149 TIGR01664 DNA-3'-Pase DNA 3'-p 93.5 0.23 4.9E-06 49.9 7.4 92 661-773 43-158 (166)
150 PLN02919 haloacid dehalogenase 93.4 0.33 7.1E-06 62.9 10.6 114 660-793 161-281 (1057)
151 PF13344 Hydrolase_6: Haloacid 93.3 0.13 2.8E-06 46.9 4.9 49 653-701 7-58 (101)
152 TIGR01458 HAD-SF-IIA-hyp3 HAD- 93.1 0.88 1.9E-05 49.2 11.8 48 653-700 10-64 (257)
153 PLN02423 phosphomannomutase 93.0 0.37 8.1E-06 51.6 8.7 39 736-776 188-231 (245)
154 TIGR01691 enolase-ppase 2,3-di 93.0 0.32 7E-06 51.1 7.9 98 658-774 93-193 (220)
155 TIGR01686 FkbH FkbH-like domai 93.0 0.25 5.5E-06 55.2 7.6 91 660-775 31-128 (320)
156 TIGR01681 HAD-SF-IIIC HAD-supe 92.7 0.25 5.5E-06 47.2 6.2 39 660-698 29-68 (128)
157 PRK10563 6-phosphogluconate ph 92.6 0.13 2.7E-06 54.2 4.3 93 660-774 88-183 (221)
158 TIGR02247 HAD-1A3-hyp Epoxide 92.6 0.15 3.3E-06 53.1 4.8 95 659-772 93-191 (211)
159 PLN03017 trehalose-phosphatase 91.5 3 6.4E-05 47.0 13.5 46 648-694 119-166 (366)
160 PF08235 LNS2: LNS2 (Lipin/Ned 91.3 0.69 1.5E-05 45.5 7.3 105 658-772 25-141 (157)
161 PRK09456 ?-D-glucose-1-phospha 91.0 0.42 9.1E-06 49.4 6.0 95 660-773 84-181 (199)
162 KOG3120 Predicted haloacid deh 90.7 0.41 8.9E-06 48.9 5.2 121 660-782 84-215 (256)
163 PRK10444 UMP phosphatase; Prov 90.1 1.3 2.8E-05 47.6 8.9 48 653-700 10-60 (248)
164 TIGR01993 Pyr-5-nucltdase pyri 90.0 0.65 1.4E-05 47.2 6.3 93 660-773 84-181 (184)
165 PLN02645 phosphoglycolate phos 89.5 0.77 1.7E-05 51.1 6.9 49 653-701 37-88 (311)
166 PF03767 Acid_phosphat_B: HAD 88.9 0.6 1.3E-05 49.5 5.2 90 659-765 114-207 (229)
167 PRK10725 fructose-1-P/6-phosph 88.8 0.91 2E-05 46.2 6.4 92 662-772 90-181 (188)
168 PHA02597 30.2 hypothetical pro 88.4 1.1 2.4E-05 46.1 6.7 94 660-773 74-170 (197)
169 PF09419 PGP_phosphatase: Mito 87.4 2.1 4.5E-05 42.8 7.5 84 658-767 57-154 (168)
170 KOG3040 Predicted sugar phosph 87.3 3.5 7.6E-05 41.9 9.0 51 650-700 13-66 (262)
171 COG0637 Predicted phosphatase/ 84.9 1.7 3.6E-05 45.8 5.9 100 658-774 84-183 (221)
172 TIGR01684 viral_ppase viral ph 84.6 2.2 4.8E-05 46.3 6.6 52 661-712 146-198 (301)
173 PLN02177 glycerol-3-phosphate 83.9 12 0.00025 44.5 12.8 98 661-777 111-215 (497)
174 TIGR01452 PGP_euk phosphoglyco 83.0 11 0.00023 41.3 11.4 48 654-701 12-62 (279)
175 COG3700 AphA Acid phosphatase 82.7 2.6 5.7E-05 41.6 5.6 86 661-771 115-205 (237)
176 TIGR01680 Veg_Stor_Prot vegeta 82.7 5.8 0.00013 42.7 8.7 88 658-763 143-235 (275)
177 PF00403 HMA: Heavy-metal-asso 82.5 0.098 2.1E-06 42.9 -3.7 54 42-97 9-62 (62)
178 PRK10748 flavin mononucleotide 80.2 5 0.00011 42.7 7.4 92 660-776 113-207 (238)
179 PHA03398 viral phosphatase sup 79.8 4.4 9.5E-05 44.1 6.6 51 661-711 148-199 (303)
180 TIGR01689 EcbF-BcbF capsule bi 79.7 3.7 8.1E-05 39.0 5.5 32 659-690 23-54 (126)
181 PLN02151 trehalose-phosphatase 79.0 22 0.00048 40.0 12.1 63 736-803 268-341 (354)
182 TIGR01457 HAD-SF-IIA-hyp2 HAD- 77.8 4.6 9.9E-05 43.4 6.2 49 653-701 10-61 (249)
183 TIGR02251 HIF-SF_euk Dullard-l 76.5 1.9 4.2E-05 43.0 2.7 91 660-773 42-135 (162)
184 COG0241 HisB Histidinol phosph 75.2 5.9 0.00013 40.1 5.7 96 661-772 32-144 (181)
185 TIGR01106 ATPase-IIC_X-K sodiu 75.0 66 0.0014 41.9 16.7 196 211-428 118-326 (997)
186 TIGR01663 PNK-3'Pase polynucle 73.5 9.6 0.00021 45.4 7.8 40 661-700 198-249 (526)
187 PF02358 Trehalose_PPase: Treh 73.2 7.4 0.00016 41.3 6.3 64 729-793 157-233 (235)
188 TIGR01647 ATPase-IIIA_H plasma 72.6 69 0.0015 40.4 15.6 38 244-282 111-148 (755)
189 TIGR01493 HAD-SF-IA-v2 Haloaci 72.3 3.1 6.7E-05 41.7 3.0 84 660-769 90-175 (175)
190 TIGR01657 P-ATPase-V P-type AT 72.1 1.7E+02 0.0037 38.5 19.5 42 244-287 248-291 (1054)
191 TIGR01116 ATPase-IIA1_Ca sarco 68.1 1.3E+02 0.0029 38.8 17.0 173 244-429 92-272 (917)
192 COG1011 Predicted hydrolase (H 65.9 21 0.00045 37.2 7.9 122 660-803 99-226 (229)
193 COG1877 OtsB Trehalose-6-phosp 65.6 31 0.00068 37.3 9.0 125 652-776 32-228 (266)
194 PF05822 UMPH-1: Pyrimidine 5' 65.4 20 0.00042 38.2 7.2 132 659-803 89-241 (246)
195 TIGR02244 HAD-IG-Ncltidse HAD 64.5 25 0.00055 39.5 8.3 106 662-771 186-317 (343)
196 PF00389 2-Hacid_dh: D-isomer 58.9 1.2E+02 0.0026 28.8 11.0 45 729-776 42-89 (133)
197 PRK10517 magnesium-transportin 57.7 4.3E+02 0.0094 34.1 18.7 42 244-286 184-225 (902)
198 PTZ00445 p36-lilke protein; Pr 57.6 91 0.002 32.4 10.1 137 610-771 29-199 (219)
199 TIGR01522 ATPase-IIA2_Ca golgi 51.5 5.3E+02 0.011 33.3 18.2 163 245-429 137-307 (884)
200 PF12689 Acid_PPase: Acid Phos 51.4 42 0.00091 33.7 6.6 41 660-700 45-86 (169)
201 PRK15122 magnesium-transportin 50.2 6.9E+02 0.015 32.4 18.9 160 244-428 173-351 (903)
202 TIGR01524 ATPase-IIIB_Mg magne 49.6 3.1E+02 0.0067 35.3 15.6 41 244-285 150-190 (867)
203 PF00122 E1-E2_ATPase: E1-E2 A 49.4 1.9E+02 0.0041 30.2 11.8 193 210-432 2-212 (230)
204 COG0647 NagD Predicted sugar p 43.4 28 0.00061 37.7 4.2 45 652-696 16-60 (269)
205 PRK14189 bifunctional 5,10-met 41.9 3.3E+02 0.0072 29.9 12.1 166 604-793 11-208 (285)
206 PRK14194 bifunctional 5,10-met 39.0 4.3E+02 0.0093 29.2 12.5 166 604-793 12-209 (301)
207 PF13242 Hydrolase_like: HAD-h 38.8 29 0.00063 29.4 2.8 53 739-793 11-71 (75)
208 PRK14179 bifunctional 5,10-met 38.7 5.6E+02 0.012 28.1 13.2 165 604-792 10-207 (284)
209 TIGR01459 HAD-SF-IIA-hyp4 HAD- 37.1 28 0.00061 37.0 3.1 97 662-773 140-237 (242)
210 PF06506 PrpR_N: Propionate ca 36.5 1E+02 0.0022 31.0 6.9 107 664-815 65-172 (176)
211 PF13380 CoA_binding_2: CoA bi 35.8 44 0.00095 31.2 3.8 39 662-700 65-104 (116)
212 TIGR00216 ispH_lytB (E)-4-hydr 34.9 2.5E+02 0.0055 30.6 9.9 172 576-780 69-265 (280)
213 TIGR01460 HAD-SF-IIA Haloacid 34.9 76 0.0016 33.6 5.9 48 653-700 7-58 (236)
214 TIGR01456 CECR5 HAD-superfamil 34.9 1.3E+02 0.0028 33.6 8.0 49 653-701 9-65 (321)
215 PRK14188 bifunctional 5,10-met 34.6 5.4E+02 0.012 28.4 12.4 166 604-793 10-208 (296)
216 COG0474 MgtA Cation transport 34.5 7.7E+02 0.017 31.9 15.8 201 208-429 114-331 (917)
217 COG2608 CopZ Copper chaperone 34.3 3.7 8E-05 34.7 -3.4 55 43-99 14-68 (71)
218 PF01455 HupF_HypC: HupF/HypC 34.3 87 0.0019 26.3 4.8 33 237-269 16-51 (68)
219 PF03120 DNA_ligase_OB: NAD-de 34.0 19 0.00042 31.3 1.0 22 251-272 45-67 (82)
220 PLN03063 alpha,alpha-trehalose 33.7 3.5E+02 0.0076 34.4 12.3 70 613-698 496-571 (797)
221 TIGR02250 FCP1_euk FCP1-like p 33.7 65 0.0014 31.8 4.8 41 659-700 57-97 (156)
222 PF12710 HAD: haloacid dehalog 30.9 24 0.00051 35.6 1.2 14 453-466 1-14 (192)
223 PRK01045 ispH 4-hydroxy-3-meth 30.9 2.6E+02 0.0057 30.8 9.2 175 575-781 68-268 (298)
224 PF15584 Imm44: Immunity prote 30.5 21 0.00046 31.4 0.6 19 258-276 13-31 (94)
225 PRK01122 potassium-transportin 30.0 1.2E+03 0.025 29.1 18.2 82 202-292 64-147 (679)
226 TIGR01452 PGP_euk phosphoglyco 29.5 1.2E+02 0.0027 32.9 6.6 92 662-772 145-242 (279)
227 PRK14174 bifunctional 5,10-met 28.9 6.7E+02 0.015 27.6 12.0 165 604-793 9-213 (295)
228 TIGR00612 ispG_gcpE 1-hydroxy- 28.1 1.8E+02 0.0038 32.4 7.2 92 666-776 213-315 (346)
229 PRK11507 ribosome-associated p 27.0 73 0.0016 26.9 3.1 26 241-266 38-63 (70)
230 COG2503 Predicted secreted aci 26.1 3.3E+02 0.0071 29.0 8.3 86 661-769 123-212 (274)
231 TIGR01494 ATPase_P-type ATPase 25.3 4.7E+02 0.01 31.1 11.1 148 244-429 53-213 (499)
232 cd05017 SIS_PGI_PMI_1 The memb 24.8 1.2E+02 0.0026 28.1 4.8 38 660-699 54-91 (119)
233 PRK14042 pyruvate carboxylase 24.6 2.8E+02 0.006 33.9 8.8 116 654-773 87-223 (596)
234 PRK14184 bifunctional 5,10-met 24.4 9.7E+02 0.021 26.3 12.4 165 604-793 9-211 (286)
235 cd00860 ThrRS_anticodon ThrRS 24.4 1.6E+02 0.0034 25.4 5.2 47 654-700 6-53 (91)
236 COG1230 CzcD Co/Zn/Cd efflux s 23.7 1E+03 0.022 26.3 12.5 122 812-946 19-143 (296)
237 PRK14182 bifunctional 5,10-met 23.6 9.6E+02 0.021 26.3 11.8 164 604-793 9-207 (282)
238 PF04551 GcpE: GcpE protein; 23.6 3.5E+02 0.0076 30.5 8.5 145 611-776 161-324 (359)
239 PRK14166 bifunctional 5,10-met 23.4 1E+03 0.022 26.1 12.2 166 604-793 9-207 (282)
240 PRK14190 bifunctional 5,10-met 23.3 9.7E+02 0.021 26.3 11.8 165 604-793 11-208 (284)
241 PRK14169 bifunctional 5,10-met 23.2 1E+03 0.022 26.1 12.4 166 604-793 9-206 (282)
242 PRK03557 zinc transporter ZitB 23.1 1E+03 0.022 26.3 12.5 49 814-862 18-67 (312)
243 PF13275 S4_2: S4 domain; PDB: 22.5 51 0.0011 27.4 1.5 23 242-264 35-57 (65)
244 COG0078 ArgF Ornithine carbamo 22.4 3.2E+02 0.007 30.1 7.8 84 664-775 91-180 (310)
245 TIGR01523 ATPase-IID_K-Na pota 22.1 2.6E+02 0.0057 36.7 8.5 41 245-286 138-178 (1053)
246 COG0272 Lig NAD-dependent DNA 21.7 1.4E+02 0.003 36.4 5.4 75 251-336 363-439 (667)
247 PF06941 NT5C: 5' nucleotidase 21.2 1.1E+02 0.0024 31.1 4.0 40 660-699 73-120 (191)
248 COG1916 Uncharacterized homolo 20.7 5.3E+02 0.011 29.1 9.0 40 661-700 97-136 (388)
249 PRK11840 bifunctional sulfur c 20.6 4.5E+02 0.0097 29.3 8.6 50 647-696 165-217 (326)
No 1
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.3e-215 Score=1794.30 Aligned_cols=923 Identities=60% Similarity=0.928 Sum_probs=872.7
Q ss_pred cccccCCCCCCCCCcHHHHHHHHHhhhccccccccchhhhccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCC
Q 002230 4 YLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSS 83 (950)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~f~~~~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 83 (950)
++.++|. .+.+|++.++++|||.|. .++|++|||||.+++++..|....++ +.|+...+.+|+.+|.++. +.+
T Consensus 2 ~~~~~~~-~~~~n~~~~~~~~~~~a~-~~~~~~~~~~~~~~l~~~~~~~~~r~----~~r~~~~~~~a~~~~~~~~-~~~ 74 (1034)
T KOG0204|consen 2 LLDKDFV-VSMKNSSIEALQRWRLAY-IVLEASRRFRFGASLKKLRELMEPRR----KIRSAVLVSKAAALFIDAG-SRT 74 (1034)
T ss_pred Ccccccc-cccccchhhhhhhhhhhh-hhcccchhhccccCHHHHHHHHHHHh----hhhhhhcccchhhhhhccc-ccc
Confidence 4556776 888999999999999877 99999999999999998887555554 8899999999999998873 333
Q ss_pred ccccccccccCCcccChhhhhhhhccCChHHHHHhcCHHHHHHHhCCCccCCCChhHHHHHHHHhhcCCCccCCCCCccH
Q 002230 84 EYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGF 163 (950)
Q Consensus 84 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f 163 (950)
++.+ +++++++.++++.++.+.|+.+||++|+|+.|+||+..||+.+++++.+|++.||+|.+|++++++|
T Consensus 75 e~~~---------~i~~e~l~~i~~~~~~~~L~~~gGv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~F 145 (1034)
T KOG0204|consen 75 EYTL---------GIGAEELVKIVKEHDLKALNAYGGVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGF 145 (1034)
T ss_pred cccc---------ccCHHHHHHHhhccchhhhhhccCHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccH
Confidence 3322 7888999999999999999999999999999999999999998888999999999999999999999
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhhccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcCCeEEEE
Q 002230 164 WVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVA 243 (950)
Q Consensus 164 ~~~~~~~~~~~~~~il~i~a~~s~~~~~~~~~~~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~ 243 (950)
|+++|++|+|.++++|++||++|+++++++++++++||||++|++++++|++++|++||+|++||++|+++..+.+++|+
T Consensus 146 l~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~Vi 225 (1034)
T KOG0204|consen 146 LRFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVI 225 (1034)
T ss_pred HHHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcccccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCeEEEEecCCcCCCcEEEeCCCCeecccEEEEeecceEEEcccccCCCCcccccC-CCCeEEeccEEeeceEEEEEEE
Q 002230 244 RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA-LNPFLLSGTKVQNGSCKMLVTT 322 (950)
Q Consensus 244 R~g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g~~l~VDeS~LTGEs~pv~k~~-~~~~l~sGt~v~~G~~~~~V~~ 322 (950)
|||++++|++.|||||||++|+.||+|||||++++|++|.+|||+|||||++++|+. .+|||+|||++.+|+++|+||+
T Consensus 226 R~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTa 305 (1034)
T KOG0204|consen 226 RGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTA 305 (1034)
T ss_pred ECCEEEEEEEeeeeeccEEEeecCCccccceEEEeccceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEE
Confidence 999999999999999999999999999999999999999999999999999999986 8999999999999999999999
Q ss_pred EeeccchhhHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCc--cccCCcchHHHHHH
Q 002230 323 VGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTH--WTWSGDDALEILEF 400 (950)
Q Consensus 323 ~G~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 400 (950)
+|+||+||++|..+....+++||||.+++++|..|+++++.+|++++++++.+|+......+.. +.|.......++++
T Consensus 306 VGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~ 385 (1034)
T KOG0204|consen 306 VGMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKF 385 (1034)
T ss_pred eeecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHH
Confidence 9999999999999999998999999999999999999999999999999999999877655433 56666667789999
Q ss_pred HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeeec
Q 002230 401 FAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480 (950)
Q Consensus 401 ~~~~i~ilvvavP~~L~lav~l~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~ 480 (950)
|.++++++|+|+|||||||||++|+|+++||++|++|||+++||||||++++||+|||||||+|+|+|++.|++++.+..
T Consensus 386 f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~ 465 (1034)
T KOG0204|consen 386 FIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKV 465 (1034)
T ss_pred hhheeEEEEEECCCCccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888764
Q ss_pred cCCCCCCCCCCCCChHHHHHHHHHHHhcCCCceeecCCC--ceeecCChhhhHHHHHHHHcCCChHHHhhhcceEEEecC
Q 002230 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGN--KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPF 558 (950)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~--~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~pF 558 (950)
+... .+.+++...+++.++++.|++.++..++.+ .+++.|+|||+||+.|+..+|++++..|.+.++++++||
T Consensus 466 ~~~~-----~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~F 540 (1034)
T KOG0204|consen 466 NSPK-----SSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPF 540 (1034)
T ss_pred cCcc-----cccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEecc
Confidence 4321 156889999999999999999999987665 789999999999999999999999999999999999999
Q ss_pred CCCCceEEEEEEcCCCc-EEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCC
Q 002230 559 NSVKKQMGVVIELPEGG-FRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNE 637 (950)
Q Consensus 559 ~s~~k~msvvv~~~~~~-~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~ 637 (950)
||.||+|+++++.++++ | +|||||+|+|+.+|+++++++|+..+++++.++.+++.|+.||++||||+|+|||++...
T Consensus 541 NS~kK~~gvvi~~~~~~~y-~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~ 619 (1034)
T KOG0204|consen 541 NSVKKRMGVVIKLPDGGHY-VHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAG 619 (1034)
T ss_pred CcccceeeEEEEcCCCCeE-EEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccC
Confidence 99999999999988877 6 999999999999999999999999999999999999999999999999999999996543
Q ss_pred ----CC-CCCCCCCCceEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc--eeeeCc
Q 002230 638 ----FS-ADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG--IAIEGP 710 (950)
Q Consensus 638 ----~~-~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~--~vi~g~ 710 (950)
++ +.++.++.+++++|++||+||+|||++++|+.||+|||+|+|+||||..||++||.+|||.++++ .+++|+
T Consensus 620 ~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~ 699 (1034)
T KOG0204|consen 620 PDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGK 699 (1034)
T ss_pred CCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecch
Confidence 22 23357789999999999999999999999999999999999999999999999999999999988 999999
Q ss_pred ccccCCHHHHhhhhccccEEeecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEE
Q 002230 711 EFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVI 790 (950)
Q Consensus 711 ~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDiv 790 (950)
+|++++++++++++|+++|+||++|.||+.+|+.|+++ |++||+||||+||+|||++||||+|||++|||+|||+||||
T Consensus 700 eFr~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~-g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDII 778 (1034)
T KOG0204|consen 700 EFRELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQ-GEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDII 778 (1034)
T ss_pred hhhhcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhc-CcEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeE
Confidence 99999999999999999999999999999999999988 99999999999999999999999999999999999999999
Q ss_pred eccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhHHHHHHHHHHHHHHHHHHhccCCCCc
Q 002230 791 ILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNG 870 (950)
Q Consensus 791 l~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~N~~~~~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~p~~ 870 (950)
|+||||++|+++++|||++|+||+||+||||++|+++++++|++++..+.+||+++||||+|+|||+|++||||||||++
T Consensus 779 i~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~ 858 (1034)
T KOG0204|consen 779 ILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTD 858 (1034)
T ss_pred EEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCC--cccccchHHhHHHHHHHHHHHHhcccC
Q 002230 871 DLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKAVFRLDGPD--PDLILNTLIFNTFVFCQVCLSTCIRST 948 (950)
Q Consensus 871 ~l~~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~t~~F~~~v~~q~~n~~~~r~~ 948 (950)
+||+|+|++|++||||+.||+||++|++||++++|+++|.|..+|+.+++. ++..++|++||+|||||+|||||+|++
T Consensus 859 ~Lm~RkP~GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~~if~~~~~~~~~~~~~nTiIFNtFV~~qvFNEinaRki 938 (1034)
T KOG0204|consen 859 ELMKRKPVGRTKPLITRTMWKNILGQAVYQLIVLFILNFAGKSIFGLNGPLHSPPSVHNTIIFNTFVFCQVFNEINARKI 938 (1034)
T ss_pred HHhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCCCCCchhhheeeehhHHHHHHHHHHHhhcch
Confidence 999999999999999999999999999999999999999999999877653 477899999999999999999999998
Q ss_pred C
Q 002230 949 E 949 (950)
Q Consensus 949 ~ 949 (950)
|
T Consensus 939 ~ 939 (1034)
T KOG0204|consen 939 D 939 (1034)
T ss_pred h
Confidence 5
No 2
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.3e-147 Score=1245.06 Aligned_cols=810 Identities=34% Similarity=0.520 Sum_probs=701.2
Q ss_pred cCHHHHHHHhCCCccCCCChhHHHHHHHHhhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhccccCCCC
Q 002230 119 GGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPK 198 (950)
Q Consensus 119 ~~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~il~i~a~~s~~~~~~~~~~~~ 198 (950)
..+++.+..|.||++.||+.++ +.+|++.||.|+++...++|+|+.+++||.|+...+|+++|++|+++..
T Consensus 7 ~~v~e~~~~f~t~~~~GLt~~e--v~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~~------- 77 (972)
T KOG0202|consen 7 KSVSEVLAEFGTDLEEGLTSDE--VTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLAD------- 77 (972)
T ss_pred CcHHHHHHHhCcCcccCCCHHH--HHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHh-------
Confidence 4588899999999999999987 9999999999999999999999999999999999999999999999874
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcCCeEEEEeCCeEEEEecCCcCCCcEEEeCCCCeecccEEEEe
Q 002230 199 GAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVS 278 (950)
Q Consensus 199 ~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~ 278 (950)
|.|+++|.+++++++.+..+++|+.++..+.|.+. .+..++|+|+|+.+.++++||||||||.|+.||+||||.++++
T Consensus 78 -~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l-~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e 155 (972)
T KOG0202|consen 78 -FDEPFVITLIIVINVTVGFVQEYNAEKALEALKEL-VPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIE 155 (972)
T ss_pred -cccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhc-CCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEe
Confidence 56889999999999999999999999999999874 5568999999999999999999999999999999999999999
Q ss_pred ecceEEEcccccCCCCccccc-------------CCCCeEEeccEEeeceEEEEEEEEeeccchhhHhhhhcCCCCCCCh
Q 002230 279 GFSVLINESSLTGESEPVNVN-------------ALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETP 345 (950)
Q Consensus 279 g~~l~VDeS~LTGEs~pv~k~-------------~~~~~l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~~~~~~~~tp 345 (950)
..++.||||+|||||.|+.|. ...+++|+||.|..|.++++|++||.+|++|++...+.+.++++||
T Consensus 156 ~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTP 235 (972)
T KOG0202|consen 156 AKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTP 235 (972)
T ss_pred eeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCCc
Confidence 999999999999999999994 2356899999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHHHHHHHHH
Q 002230 346 LQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLA 425 (950)
Q Consensus 346 lq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~lav~l~l~ 425 (950)
||+++|.+.+.+..+..++++.++++-+ +++. .-.++. .....+..+|.+++++.|+++|||||..+|++++
T Consensus 236 Lqk~ld~~G~qLs~~is~i~v~v~~~ni-g~f~-~p~~~g------~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLA 307 (972)
T KOG0202|consen 236 LQKKLDEFGKQLSKVISFICVGVWLLNI-GHFL-DPVHGG------SWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLA 307 (972)
T ss_pred HHHHHHHHHHHHHHHheehhhhHHHhhh-hhhc-cccccc------cchhchhhhhhHHHHHHHHhccCCCcchhhhhHH
Confidence 9999999999988665555444443321 2221 111111 1223577899999999999999999999999999
Q ss_pred HHHHHHhccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeeecc------CCCCCCC----------C
Q 002230 426 FAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVD------NSKGTPA----------F 489 (950)
Q Consensus 426 ~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~------~~~~~~~----------~ 489 (950)
.+.+||+|++++||++.++|+||.+++||+|||||||+|+|++.++|+.+...... ...+.+. .
T Consensus 308 LG~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~ 387 (972)
T KOG0202|consen 308 LGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEK 387 (972)
T ss_pred HhHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCcccc
Confidence 99999999999999999999999999999999999999999999999976543211 1111110 0
Q ss_pred CCCCChHHHHHHHHHHHhcCCCceeecCCCceeecCChhhhHHHHHHHHcCCChHH---------------HhhhcceEE
Q 002230 490 GSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQA---------------ERQASKIVK 554 (950)
Q Consensus 490 ~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~---------------~~~~~~i~~ 554 (950)
......+.+.-+.+..+.|+.+.+..++.+.++..|.|||.||..++.+.++.-.. ..+.++.+.
T Consensus 388 ~~~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~ 467 (972)
T KOG0202|consen 388 DKAGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIA 467 (972)
T ss_pred ccccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhhee
Confidence 01122334445566667777777776655666779999999999999998875422 223445669
Q ss_pred EecCCCCCceEEEEEEcCCC--cEEEEEcCchHHHHHhccccccCCC-eeecCCHHHHHHHHHHHHHHHhcccceeEEEE
Q 002230 555 VEPFNSVKKQMGVVIELPEG--GFRVHCKGASEIILAACDKFLNSNG-EVVPLNEAAVNHLNETIEKFASEALRTLCLAC 631 (950)
Q Consensus 555 ~~pF~s~~k~msvvv~~~~~--~~~~~~KGa~e~il~~c~~~~~~~g-~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~ 631 (950)
++||+|+||+|+|.+..+.+ ++.+|+|||+|.|+++|++++..+| ..+|+++..|+.+.+...+|+++|||||++|+
T Consensus 468 elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~ 547 (972)
T KOG0202|consen 468 ELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALAS 547 (972)
T ss_pred EeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEc
Confidence 99999999999999986544 5899999999999999988887776 55999999999999999999999999999999
Q ss_pred EEcCCC--------CCCCCCCCCCceEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC
Q 002230 632 MEIGNE--------FSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN 703 (950)
Q Consensus 632 ~~~~~~--------~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~ 703 (950)
++.+.. ....+...|.+|+|+|++|+.||||++++++|+.|+++||+|+|+|||+..||.+||+++||...+
T Consensus 548 ~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ 627 (972)
T KOG0202|consen 548 KDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSED 627 (972)
T ss_pred cCCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCC
Confidence 977631 122345678999999999999999999999999999999999999999999999999999998876
Q ss_pred c----eeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCC
Q 002230 704 G----IAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAG 779 (950)
Q Consensus 704 ~----~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g 779 (950)
. .+++|++|+.++++++++...++.||+|++|.+|.++|+.||++ |++|+|||||+||+||||.||||||||++|
T Consensus 628 ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~-geivAMTGDGVNDApALK~AdIGIAMG~~G 706 (972)
T KOG0202|consen 628 EDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSR-GEVVAMTGDGVNDAPALKKADIGIAMGISG 706 (972)
T ss_pred ccccccccchhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhc-CCEEEecCCCccchhhhhhcccceeecCCc
Confidence 6 88999999999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred cHHHHhcCCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhHHHHHHHHHHHHHHH
Q 002230 780 TEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLG 859 (950)
Q Consensus 780 ~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~N~~~~~~~~~~~~~~~~~pl~~~qll~~nli~d~l~ 859 (950)
|++||+|||+||.||||++|+.++++||.+|+||++|+.|++..|+.++...|+++.+..+.||+|+|+||+|++||.+|
T Consensus 707 TdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~P 786 (972)
T KOG0202|consen 707 TDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPP 786 (972)
T ss_pred cHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCccccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHH---HHHhc--cc--ccccCC----------CC-
Q 002230 860 ALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWY---LQTRG--KA--VFRLDG----------PD- 921 (950)
Q Consensus 860 ~lal~~e~p~~~l~~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~---l~~~~--~~--~~~~~~----------~~- 921 (950)
|.+|+.|||+.|+|+|||+++++++|+...+..++..++|..+..+. ..|.+ .. +..+.+ .+
T Consensus 787 A~aLG~ep~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~~~~vt~~~~~~~~~c~~~~~~~~c 866 (972)
T KOG0202|consen 787 ATALGFEPVDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGADGKVTYRQLAHYNSCCRDFYGSRC 866 (972)
T ss_pred hhhcCCCCCChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcCCCCcChhhhcchhhhcccccccch
Confidence 99999999999999999999999999999998898888876543322 22221 10 000000 00
Q ss_pred ---cccccchHHhHHHHHHHHHHHHhcccC
Q 002230 922 ---PDLILNTLIFNTFVFCQVCLSTCIRST 948 (950)
Q Consensus 922 ---~~~~~~t~~F~~~v~~q~~n~~~~r~~ 948 (950)
......||.|..||+...||.+|||+-
T Consensus 867 ~~F~~~~~~tMa~tv~V~~emfNaL~~~se 896 (972)
T KOG0202|consen 867 AVFEDMCPLTMALTVLVFIEMFNALNCLSE 896 (972)
T ss_pred hhhcccccceEEEeehhHHHHHHHhhcccC
Confidence 011235999999999999999999974
No 3
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=7.3e-142 Score=1328.22 Aligned_cols=846 Identities=51% Similarity=0.811 Sum_probs=746.3
Q ss_pred ccCCcccChhhhhhhhcc-CChHHHHHhcCHHHHHHHhCCCccCCCChhHHHHHHHHhhcCCCccCCCCCccHHHHHHHH
Q 002230 92 AASGFQICPDELGSIVEG-HDIKKLKVHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEA 170 (950)
Q Consensus 92 ~~~g~~~~~~~~~~~~~~-~~~~~l~~~~~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~ 170 (950)
...||.+.-.+++++.+. ++.+.|+.+||++++++.|+++...||+.+++++++|+++||+|+++.++++++|++++++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~ 93 (941)
T TIGR01517 14 FTDGFDVGVSILTDLTDIFKRAPIYEKLGGAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAA 93 (941)
T ss_pred cCCCCCCCHHHHHHhcCchhhHHHHHHhCCHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHH
Confidence 456899999999998865 4678889999999999999999999999333349999999999999999999999999999
Q ss_pred HhhHHHHHHHHHHHHHHHhhcc-----ccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcCCeEEEEeC
Q 002230 171 LHDMTLMILAVCALVSLVVGIA-----TEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARN 245 (950)
Q Consensus 171 ~~~~~~~il~i~a~~s~~~~~~-----~~~~~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~ 245 (950)
|+++++++|++++++++++++. .++..+.|+++++|+++++++++++++++|+++++++++++..++.+++|+||
T Consensus 94 f~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRd 173 (941)
T TIGR01517 94 LSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRG 173 (941)
T ss_pred HhCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 9999999999999999998753 22334589999999999999999999999999999999987666779999999
Q ss_pred CeEEEEecCCcCCCcEEEeCCCCeecccEEEEeecceEEEcccccCCCCcccccCC-CCeEEeccEEeeceEEEEEEEEe
Q 002230 246 GFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNAL-NPFLLSGTKVQNGSCKMLVTTVG 324 (950)
Q Consensus 246 g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g~~l~VDeS~LTGEs~pv~k~~~-~~~l~sGt~v~~G~~~~~V~~~G 324 (950)
|++++|+++||||||+|.|++||+|||||++++|+++.||||+|||||.|+.|..+ ++++|+||.|.+|+++++|++||
T Consensus 174 G~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG 253 (941)
T TIGR01517 174 GQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVG 253 (941)
T ss_pred CEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeC
Confidence 99999999999999999999999999999999997799999999999999999754 46899999999999999999999
Q ss_pred eccchhhHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHH
Q 002230 325 MRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIA 404 (950)
Q Consensus 325 ~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (950)
.+|++|++++++.+++ +++|+|++++++++++.++++++++++|++++..++......+.. ........+...+..+
T Consensus 254 ~~T~~gki~~~~~~~~-~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~a 330 (941)
T TIGR01517 254 VNSFGGKLMMELRAEG-EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGR--DTEEDAQTFLDHFIIA 330 (941)
T ss_pred CCcHHHHHHHhhccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccc--ccchhhHHHHHHHHHH
Confidence 9999999999988765 568999999999999999999888888887765443321111000 0000112567788999
Q ss_pred HHHHHHHhcCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeeeccCCC
Q 002230 405 VTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSK 484 (950)
Q Consensus 405 i~ilvvavP~~L~lav~l~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~ 484 (950)
+++++++||||||+++|++++.++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++..+..+..++.
T Consensus 331 l~llv~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~- 409 (941)
T TIGR01517 331 VTIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDV- 409 (941)
T ss_pred HHHHHhhCCCchHHHHHHHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcc-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999976654432211
Q ss_pred CCCCCCCCCChHHHHHHHHHHHhcCCCceeecCCCceeecCChhhhHHHHHHHHcCCChHHHhhhcceEEEecCCCCCce
Q 002230 485 GTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQ 564 (950)
Q Consensus 485 ~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~pF~s~~k~ 564 (950)
....++...+++..++++|+......++.+..+..|||+|.|+++++.+.+.+....+..+++++.+||+|++|+
T Consensus 410 -----~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ 484 (941)
T TIGR01517 410 -----LRNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKF 484 (941)
T ss_pred -----cccCCHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCe
Confidence 111233455566667776665443322233445689999999999999888877777777888999999999999
Q ss_pred EEEEEEcCCCcEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCCCCCC
Q 002230 565 MGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPI 644 (950)
Q Consensus 565 msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~~~~~ 644 (950)
|+++++.+++.+++++|||||.+++.|+.+++.+|...++++ .++++++.+++|+++|+|++++|||+++.+.....+.
T Consensus 485 msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~-~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~ 563 (941)
T TIGR01517 485 MSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISD-DKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDY 563 (941)
T ss_pred EEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcH-HHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccc
Confidence 999999777779999999999999999988777888888887 7788999999999999999999999986543323334
Q ss_pred CCCceEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhh
Q 002230 645 PTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI 724 (950)
Q Consensus 645 ~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~ 724 (950)
.|++++|+|+++++||+||+++++|++|+++||+++|+|||++.||.++|++|||.+++..+++|++++.++++++.+.+
T Consensus 564 ~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i 643 (941)
T TIGR01517 564 PNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPIL 643 (941)
T ss_pred cccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHh
Confidence 57899999999999999999999999999999999999999999999999999999888899999999999999999999
Q ss_pred ccccEEeecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHH
Q 002230 725 PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 725 ~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~ 804 (950)
+++.||||++|+||.++|+.+|++ |++|+|||||+||+|||++||||||||++|+|+|+++||+++++|+|++|+++++
T Consensus 644 ~~~~Vfar~sPe~K~~iV~~lq~~-g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~ 722 (941)
T TIGR01517 644 PKLRVLARSSPLDKQLLVLMLKDM-GEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVK 722 (941)
T ss_pred ccCeEEEECCHHHHHHHHHHHHHC-CCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHH
Confidence 999999999999999999999998 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCCC
Q 002230 805 WGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNF 884 (950)
Q Consensus 805 ~gR~~~~~i~k~i~~~l~~N~~~~~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~p~~~l~~~~P~~~~~~l 884 (950)
|||++|+||+|+++|++++|+..+++.+++.++.+++|++++|+||+|+++|.+|+++|++|+|++++|++||+++++++
T Consensus 723 ~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~~~~l 802 (941)
T TIGR01517 723 WGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPL 802 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCC-----CcccccchHHhHHHHHHHHHHHHhcccC
Q 002230 885 ISNVMWRNILGQSLYQFLIIWYLQTRGKAVFRLDGP-----DPDLILNTLIFNTFVFCQVCLSTCIRST 948 (950)
Q Consensus 885 i~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~-----~~~~~~~t~~F~~~v~~q~~n~~~~r~~ 948 (950)
+++.||++|+++++||+++.+++++.+..+++..+. +.....+|++|++||+||+||.+|||+.
T Consensus 803 i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~ 871 (941)
T TIGR01517 803 ISRSMWKNILGQAGYQLVVTFILLFAGGSIFDVSGPDEITSHQQGELNTIVFNTFVLLQLFNEINARKL 871 (941)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcccccccccchhhHHHHHHHHHHHHHHHHHHccC
Confidence 999999999999999999988887776666644331 1234678999999999999999999985
No 4
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=8.5e-135 Score=1262.60 Aligned_cols=798 Identities=28% Similarity=0.412 Sum_probs=682.7
Q ss_pred cCHHHHHHHhCCCccCCCChhHHHHHHHHhhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhccccCCCC
Q 002230 119 GGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPK 198 (950)
Q Consensus 119 ~~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~il~i~a~~s~~~~~~~~~~~~ 198 (950)
..++.+++.|++++..||++++ +++|+++||+|+++.++++++|+.++++|+++++++|+++++++++++
T Consensus 10 ~~~~~v~~~l~t~~~~GLs~~e--a~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~-------- 79 (1053)
T TIGR01523 10 DIADEAAEFIGTSIPEGLTHDE--AQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH-------- 79 (1053)
T ss_pred CCHHHHHHHhCcCcccCCCHHH--HHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh--------
Confidence 4578899999999989999987 999999999999999999999999999999999999999999999876
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcCCeEEEEeCCeEEEEecCCcCCCcEEEeCCCCeecccEEEEe
Q 002230 199 GAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVS 278 (950)
Q Consensus 199 ~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~ 278 (950)
.|+|+++|++.+++..+++.+++|+.+++.++|.+.. +.+++|+|||++++|+++||||||||.|++||+|||||+|++
T Consensus 80 ~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~-~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~ 158 (1053)
T TIGR01523 80 DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLA-SPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIE 158 (1053)
T ss_pred hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccC-CCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEEEE
Confidence 5899999999999999999999999999999998754 558999999999999999999999999999999999999999
Q ss_pred ecceEEEcccccCCCCcccccCC--------------CCeEEeccEEeeceEEEEEEEEeeccchhhHhhhhcCCCC---
Q 002230 279 GFSVLINESSLTGESEPVNVNAL--------------NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGD--- 341 (950)
Q Consensus 279 g~~l~VDeS~LTGEs~pv~k~~~--------------~~~l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~~~~~~--- 341 (950)
+++|.||||+|||||.|+.|... .+++|+||.|.+|.++++|++||++|++|+|.+++.+...
T Consensus 159 ~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~~~~ 238 (1053)
T TIGR01523 159 TKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQ 238 (1053)
T ss_pred eCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhhccc
Confidence 99999999999999999999521 3679999999999999999999999999999998864321
Q ss_pred --------------------------------CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCcccc
Q 002230 342 --------------------------------DETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTW 389 (950)
Q Consensus 342 --------------------------------~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~ 389 (950)
.+||||+++++++.+++.+++++++++|++....
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~~-------------- 304 (1053)
T TIGR01523 239 RPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKFD-------------- 304 (1053)
T ss_pred cccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--------------
Confidence 2499999999999998888887777666532110
Q ss_pred CCcchHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEeeCCccccccCceEEE
Q 002230 390 SGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVL 469 (950)
Q Consensus 390 ~~~~~~~~~~~~~~~i~ilvvavP~~L~lav~l~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~ 469 (950)
.+...+..+++++++++|+|||+.++++++++++||+++|++||+++++|+||++++||+|||||||+|+|+|+
T Consensus 305 ------~~~~~~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~ 378 (1053)
T TIGR01523 305 ------VDKEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIAR 378 (1053)
T ss_pred ------hhHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEE
Confidence 11245667889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcc-eeeeccCC--CCCCC------------------------C-------------CCCCChHHHHHHHHHHHhcC
Q 002230 470 KACICE-EIKEVDNS--KGTPA------------------------F-------------GSSIPASASKLLLQSIFNNT 509 (950)
Q Consensus 470 ~~~~~~-~~~~~~~~--~~~~~------------------------~-------------~~~~~~~~~~~l~~~i~~~~ 509 (950)
++|..+ ..+..+.. ...+. . .....++....+.....+|+
T Consensus 379 ~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn 458 (1053)
T TIGR01523 379 QIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALAN 458 (1053)
T ss_pred EEEEcCCceEEecCCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhcc
Confidence 999764 22222110 00000 0 00001112233455556666
Q ss_pred CCceeec-CCCceeecCChhhhHHHHHHHHcCCChH------HH-------------------hhhcceEEEecCCCCCc
Q 002230 510 GGEVVIG-EGNKTEILGTPTETAILEFGLLLGGDFQ------AE-------------------RQASKIVKVEPFNSVKK 563 (950)
Q Consensus 510 ~~~~~~~-~~~~~~~~g~p~e~All~~a~~~g~~~~------~~-------------------~~~~~i~~~~pF~s~~k 563 (950)
.+.+..+ +++.+...|||+|.||+.++.+.|.+.. .. +..+++++.+||+|+||
T Consensus 459 ~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK 538 (1053)
T TIGR01523 459 IATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIK 538 (1053)
T ss_pred CCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCC
Confidence 6665432 2334466899999999999988886421 11 23478999999999999
Q ss_pred eEEEEEEcCCC-cEEEEEcCchHHHHHhccccccCCC-eeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCC-
Q 002230 564 QMGVVIELPEG-GFRVHCKGASEIILAACDKFLNSNG-EVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSA- 640 (950)
Q Consensus 564 ~msvvv~~~~~-~~~~~~KGa~e~il~~c~~~~~~~g-~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~- 640 (950)
||+++++.+++ .+++|+|||||.|+++|+.+...+| +..+++++.++++.+.+++|+++|+|||++|||.++.+...
T Consensus 539 ~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~ 618 (1053)
T TIGR01523 539 RMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNND 618 (1053)
T ss_pred eEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccc
Confidence 99999986544 5889999999999999998765555 56799999999999999999999999999999998653110
Q ss_pred --------CCCCCCCceEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC----------
Q 002230 641 --------DAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD---------- 702 (950)
Q Consensus 641 --------~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~---------- 702 (950)
..+..|+|++|+|+++++||+||+++++|+.|+++||+++|+|||++.||.++|+++||..+
T Consensus 619 ~~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~ 698 (1053)
T TIGR01523 619 DQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIM 698 (1053)
T ss_pred hhhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccc
Confidence 12346889999999999999999999999999999999999999999999999999999754
Q ss_pred CceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHH
Q 002230 703 NGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEV 782 (950)
Q Consensus 703 ~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ 782 (950)
...+++|++++.++++++.+.+.+..||||++|+||.++|+.+|++ |++|+|||||+||+|||++||||||||++|+++
T Consensus 699 ~~~vitG~~l~~l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~-g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~v 777 (1053)
T TIGR01523 699 DSMVMTGSQFDALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRR-KAFCAMTGDGVNDSPSLKMANVGIAMGINGSDV 777 (1053)
T ss_pred cceeeehHHhhhcCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhc-CCeeEEeCCCcchHHHHHhCCccEecCCCccHH
Confidence 3479999999999999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHhcCCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---C--CCChhHHHHHHHHHHHHH
Q 002230 783 AKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLT---G--NAPLTAVQLLWVNMIMDT 857 (950)
Q Consensus 783 ak~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~N~~~~~~~~~~~~~~---~--~~pl~~~qll~~nli~d~ 857 (950)
|+++||+++++|||++|+++++|||++|+||+|+++|.++.|+..+++.+++.++. | +.||+++|+||+|+++|.
T Consensus 778 ak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~ 857 (1053)
T TIGR01523 778 AKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSC 857 (1053)
T ss_pred HHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988887774 3 479999999999999999
Q ss_pred HHHHHhccCCCCccccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHH---hcc--cccccC-----CC--Ccccc
Q 002230 858 LGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQT---RGK--AVFRLD-----GP--DPDLI 925 (950)
Q Consensus 858 l~~lal~~e~p~~~l~~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~l~~---~~~--~~~~~~-----~~--~~~~~ 925 (950)
+|+++|++|||++++|+|||+.++++++++.+|+.++.++++++++.+..++ ++. ...... +. .....
T Consensus 858 ~palaL~~e~~~~~~m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 937 (1053)
T TIGR01523 858 FPAMGLGLEKAAPDLMDRLPHDNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYGFGSGNLGHDCDAHYHAGCNDVFK 937 (1053)
T ss_pred HHHHhhccCCCChhHHhcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccccccccccccccchhh
Confidence 9999999999999999999999999999999999999999888776655443 211 000000 00 01234
Q ss_pred cchHHhHHHHHHHHHHHHhcccC
Q 002230 926 LNTLIFNTFVFCQVCLSTCIRST 948 (950)
Q Consensus 926 ~~t~~F~~~v~~q~~n~~~~r~~ 948 (950)
.+|+.|.+++++|+||.||||+.
T Consensus 938 a~t~~f~~l~~~~~~~~~~~r~~ 960 (1053)
T TIGR01523 938 ARSAAFATMTFCALILAVEVKDF 960 (1053)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcC
Confidence 68999999999999999999985
No 5
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=8.5e-132 Score=1240.31 Aligned_cols=808 Identities=29% Similarity=0.409 Sum_probs=677.9
Q ss_pred hcCHHHHHHHhCCCccCCCChhHHHHHHHHhhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhcccc---
Q 002230 118 HGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATE--- 194 (950)
Q Consensus 118 ~~~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~il~i~a~~s~~~~~~~~--- 194 (950)
-..++++++.|+++...||++++ +++|+++||+|+++.++++++|+.++++|+++++++|+++++++++.....+
T Consensus 19 ~~~~~~~~~~l~t~~~~GLs~~e--~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~~ 96 (997)
T TIGR01106 19 KLSLDELERKYGTDLSKGLSAAR--AAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQASTE 96 (997)
T ss_pred hCCHHHHHHHhCcCcccCCCHHH--HHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccC
Confidence 34688999999999999999987 9999999999999999999999999999999999999999999877543221
Q ss_pred --CCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcCCeEEEEeCCeEEEEecCCcCCCcEEEeCCCCeecc
Q 002230 195 --GWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPA 272 (950)
Q Consensus 195 --~~~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDiV~l~~Gd~vPa 272 (950)
.....|++++.+++.+++..+++.+.+++.++..+++.+ ..+.+++|+|||++++|+++||||||+|.|++||+|||
T Consensus 97 ~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~-~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPa 175 (997)
T TIGR01106 97 EEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKN-MVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPA 175 (997)
T ss_pred CCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEee
Confidence 112467887755444444444444445444444444444 34568999999999999999999999999999999999
Q ss_pred cEEEEeecceEEEcccccCCCCcccccCCC---------CeEEeccEEeeceEEEEEEEEeeccchhhHhhhhcCCCCCC
Q 002230 273 DGLFVSGFSVLINESSLTGESEPVNVNALN---------PFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDE 343 (950)
Q Consensus 273 Dgill~g~~l~VDeS~LTGEs~pv~k~~~~---------~~l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~~~~~~~~ 343 (950)
||++++|++|.||||+|||||.|+.|..++ +++|+||.|.+|.++++|++||.+|+.|++.+.+.+...++
T Consensus 176 D~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~ 255 (997)
T TIGR01106 176 DLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLENGK 255 (997)
T ss_pred eEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhcccCC
Confidence 999999988999999999999999996543 47999999999999999999999999999999998888888
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHHHHHHH
Q 002230 344 TPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLS 423 (950)
Q Consensus 344 tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~lav~l~ 423 (950)
+|+|+++++++..+..+++++++++++++... +. .+...+..++++++++||||||++++++
T Consensus 256 ~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~----------~~~~~~~~~i~v~v~~iP~~L~~~v~i~ 317 (997)
T TIGR01106 256 TPIAIEIEHFIHIITGVAVFLGVSFFILSLIL--------GY----------TWLEAVIFLIGIIVANVPEGLLATVTVC 317 (997)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------cC----------CHHHHHHHHHHHHhhcCCccchHHHHHH
Confidence 99999999999999988888777766654221 10 2446677889999999999999999999
Q ss_pred HHHHHHHHhccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeeeccCCCCCCCCCCCCChHHHHHHHH
Q 002230 424 LAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQ 503 (950)
Q Consensus 424 l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 503 (950)
+++++++|.++|++||+++++|+||++++||||||||||+|+|+|.++|..+..+..+.................+.+..
T Consensus 318 l~~~~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 397 (997)
T TIGR01106 318 LTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSR 397 (997)
T ss_pred HHHHHHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999887665432111000001111123334556
Q ss_pred HHHhcCCCceeecCCC----ceeecCChhhhHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEcC---CCcE
Q 002230 504 SIFNNTGGEVVIGEGN----KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELP---EGGF 576 (950)
Q Consensus 504 ~i~~~~~~~~~~~~~~----~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~pF~s~~k~msvvv~~~---~~~~ 576 (950)
.++.|+++....+.++ +....|||+|.||++++...+.+....+..+++++.+||+|+||||+++++.. ++.+
T Consensus 398 ~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~ 477 (997)
T TIGR01106 398 IAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRH 477 (997)
T ss_pred HHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceE
Confidence 6777776655433222 23557999999999999877767777778899999999999999999988643 2468
Q ss_pred EEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCC--------CCCCCCCc
Q 002230 577 RVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSA--------DAPIPTEG 648 (950)
Q Consensus 577 ~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~--------~~~~~e~~ 648 (950)
++|+|||||.|+++|++++ .+|+..+++++.++.+++.+++|+++|+||+++|||.++.+... +.+..|+|
T Consensus 478 ~~~~KGApe~Il~~c~~~~-~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~ 556 (997)
T TIGR01106 478 LLVMKGAPERILERCSSIL-IHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDN 556 (997)
T ss_pred EEEEeCChHHHHHHhhHHh-cCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccC
Confidence 8999999999999999876 57888899999999999999999999999999999998653111 11233789
Q ss_pred eEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC------------------------c
Q 002230 649 YTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN------------------------G 704 (950)
Q Consensus 649 l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~------------------------~ 704 (950)
++|+|+++++||+|++++++|++|+++||+++|+|||+..||.++|+++||..++ .
T Consensus 557 L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 636 (997)
T TIGR01106 557 LCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKA 636 (997)
T ss_pred cEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccc
Confidence 9999999999999999999999999999999999999999999999999997542 2
Q ss_pred eeeeCcccccCCHHHHhhhhcccc--EEeecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHH
Q 002230 705 IAIEGPEFREKSDEELSKLIPKIQ--VMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEV 782 (950)
Q Consensus 705 ~vi~g~~~~~~~~~~~~~~~~~~~--v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ 782 (950)
.+++|.+++.++++++.+.++++. ||||++|+||.++|+.+|+. |++|+|+|||.||+|||++||||||||++|+|+
T Consensus 637 ~vi~G~~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~-g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~v 715 (997)
T TIGR01106 637 CVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDGVNDSPALKKADIGVAMGIAGSDV 715 (997)
T ss_pred eEEEhHHhhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHC-CCEEEEECCCcccHHHHhhCCcceecCCcccHH
Confidence 699999999999999999998764 99999999999999999998 999999999999999999999999999889999
Q ss_pred HHhcCCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhHHHHHHHHHHHHHHHHHH
Q 002230 783 AKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALA 862 (950)
Q Consensus 783 ak~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~N~~~~~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~la 862 (950)
||++||++++||||++|+++++|||++|.||+|+++|+++.|+..+++.++++++..++||+++|+||+|+++|++|+++
T Consensus 716 ak~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~a 795 (997)
T TIGR01106 716 SKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAIS 795 (997)
T ss_pred HHHhhceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCCccccccCCCCC-CCCCcCHHHHHHHH-HHHHHHHHHHHHHHHh-----c---cccccc---------CCC-Cc
Q 002230 863 LATEPPNGDLMKRSPVGR-KGNFISNVMWRNIL-GQSLYQFLIIWYLQTR-----G---KAVFRL---------DGP-DP 922 (950)
Q Consensus 863 l~~e~p~~~l~~~~P~~~-~~~li~~~~~~~i~-~~~~~~~~~~~~l~~~-----~---~~~~~~---------~~~-~~ 922 (950)
|++|||++++|+|||+.+ .++++++.+|..++ ..+++|++..++.++. | ..++++ ++. +.
T Consensus 796 l~~e~~~~~~m~~~P~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 875 (997)
T TIGR01106 796 LAYEKAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDS 875 (997)
T ss_pred HhcCCCCcccccCCCcCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccc
Confidence 999999999999999974 67999998876643 3455665554443321 1 112221 000 00
Q ss_pred -------------ccccchHHhHHHHHHHHHHHHhcccC
Q 002230 923 -------------DLILNTLIFNTFVFCQVCLSTCIRST 948 (950)
Q Consensus 923 -------------~~~~~t~~F~~~v~~q~~n~~~~r~~ 948 (950)
....+|+.|++|++||+||.+|||+-
T Consensus 876 ~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~R~~ 914 (997)
T TIGR01106 876 YGQEWTYEQRKYVEFTCHTAFFVSIVVVQWADLIICKTR 914 (997)
T ss_pred cccccchhcccchhhhhhHHHHHHHHHHHHHHHHHhccC
Confidence 01468999999999999999999984
No 6
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=4.8e-131 Score=1223.78 Aligned_cols=778 Identities=32% Similarity=0.521 Sum_probs=682.8
Q ss_pred cCHHHHHHHhCCCccCCCC-hhHHHHHHHHhhcCCCccCCCCCccHHHHHHHHH-hhHHHHHHHHHHHHHHHhhccccCC
Q 002230 119 GGVEGIAEKLSTSITDGIS-TSEHLLNRRKEIYGINKFTESPARGFWVYVWEAL-HDMTLMILAVCALVSLVVGIATEGW 196 (950)
Q Consensus 119 ~~v~~l~~~l~~~~~~Gl~-~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~-~~~~~~il~i~a~~s~~~~~~~~~~ 196 (950)
..++++++.|+++...||+ +++ +++|+++||+|+++.++++++|+.++++| +++++++++++++++++++
T Consensus 7 ~~~~~v~~~l~t~~~~GLs~~~e--v~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g------ 78 (884)
T TIGR01522 7 LSVEETCSKLQTDLQNGLNSSQE--ASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG------ 78 (884)
T ss_pred CCHHHHHHHhCcCcccCCCcHHH--HHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc------
Confidence 3688999999999999999 655 99999999999999999999999999999 9999999999999999886
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcCCeEEEEeCCeEEEEecCCcCCCcEEEeCCCCeecccEEE
Q 002230 197 PKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLF 276 (950)
Q Consensus 197 ~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgil 276 (950)
.|.|+++|++.++++++++.+.+|+.++..++|.+. .+.+++|+|||++++|+++||||||+|.|++||+|||||++
T Consensus 79 --~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l-~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~i 155 (884)
T TIGR01522 79 --NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKL-VPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRI 155 (884)
T ss_pred --chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEE
Confidence 588999988888888999999999999998888764 45689999999999999999999999999999999999999
Q ss_pred EeecceEEEcccccCCCCcccccCC-------------CCeEEeccEEeeceEEEEEEEEeeccchhhHhhhhcCCCCCC
Q 002230 277 VSGFSVLINESSLTGESEPVNVNAL-------------NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDE 343 (950)
Q Consensus 277 l~g~~l~VDeS~LTGEs~pv~k~~~-------------~~~l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~~~~~~~~ 343 (950)
++|+++.||||+|||||.|+.|.++ ++++|+||.|.+|+++++|++||.+|++|++.+++.+....+
T Consensus 156 i~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~k 235 (884)
T TIGR01522 156 VEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPK 235 (884)
T ss_pred EEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCCC
Confidence 9998899999999999999999754 258999999999999999999999999999999999888888
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHHHHHHH
Q 002230 344 TPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLS 423 (950)
Q Consensus 344 tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~lav~l~ 423 (950)
+|+|+.+++++++++.++++++++++++. ++. +. .+...+..++++++++||||||+++|++
T Consensus 236 t~lq~~l~~l~~~~~~~~~~~~~~~~~~~---~~~-----~~----------~~~~~~~~~v~llv~aiP~~Lp~~vt~~ 297 (884)
T TIGR01522 236 TPLQKSMDLLGKQLSLVSFGVIGVICLVG---WFQ-----GK----------DWLEMFTISVSLAVAAIPEGLPIIVTVT 297 (884)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHh-----cC----------CHHHHHHHHHHHHHHHccchHHHHHHHH
Confidence 99999999999998887765554444332 111 10 3557788899999999999999999999
Q ss_pred HHHHHHHHhccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeee-ccCCCCCC---------CCCCCC
Q 002230 424 LAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKE-VDNSKGTP---------AFGSSI 493 (950)
Q Consensus 424 l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~-~~~~~~~~---------~~~~~~ 493 (950)
+++++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++..++.+. .+.....+ ......
T Consensus 298 l~~~~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (884)
T TIGR01522 298 LALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFY 377 (884)
T ss_pred HHHHHHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCccccccccccccc
Confidence 99999999999999999999999999999999999999999999999987654321 11000000 000011
Q ss_pred ChHHHHHHHHHHHhcCCCceeecCCCceeecCChhhhHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEcC-
Q 002230 494 PASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELP- 572 (950)
Q Consensus 494 ~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~pF~s~~k~msvvv~~~- 572 (950)
++...+++ ...+.|+++.....+ .+..|||+|.|+++++.+.|.+ ..+..++.++.+||+|+||+|+++++..
T Consensus 378 ~~~~~~~l-~~~~l~~~~~~~~~~---~~~~g~p~e~All~~~~~~~~~--~~~~~~~~~~~~pF~s~~k~m~v~~~~~~ 451 (884)
T TIGR01522 378 TVAVSRIL-EAGNLCNNAKFRNEA---DTLLGNPTDVALIELLMKFGLD--DLRETYIRVAEVPFSSERKWMAVKCVHRQ 451 (884)
T ss_pred CHHHHHHH-HHHhhhCCCeecCCC---CCcCCChHHHHHHHHHHHcCcH--hHHhhCcEEeEeCCCCCCCeEEEEEEEcC
Confidence 12233333 344445554433221 1346899999999999887653 3445688899999999999999998753
Q ss_pred CCcEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEE
Q 002230 573 EGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCI 652 (950)
Q Consensus 573 ~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~l 652 (950)
++++++++||+||.|+..|++++..+|...+++++.++++.+.+++|+++|+|++++||+++ +++++++
T Consensus 452 ~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~-----------~~~l~~l 520 (884)
T TIGR01522 452 DRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE-----------KGQLTFL 520 (884)
T ss_pred CCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC-----------CCCeEEE
Confidence 56789999999999999999998878888899999999999999999999999999999865 3579999
Q ss_pred eeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEee
Q 002230 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR 732 (950)
Q Consensus 653 G~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar 732 (950)
|+++++||+|||++++|++|+++|++++|+|||+..||.++|+++||......+++|++++.++++++++.+++..||||
T Consensus 521 Gli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar 600 (884)
T TIGR01522 521 GLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFAR 600 (884)
T ss_pred EEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEE
Confidence 99999999999999999999999999999999999999999999999877778999999999999999999999999999
Q ss_pred cChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHHHHHHHHH
Q 002230 733 SSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYIN 812 (950)
Q Consensus 733 ~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~~ 812 (950)
++|+||..+|+.+|+. |++|+|+|||.||+|||++||||||||.+|+++++++||+++++|||++|++++++||++|+|
T Consensus 601 ~~P~~K~~iv~~lq~~-g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~n 679 (884)
T TIGR01522 601 ASPEHKMKIVKALQKR-GDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNN 679 (884)
T ss_pred CCHHHHHHHHHHHHHC-CCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999 999999999999999999999999999789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCCCcCHHHHHH
Q 002230 813 IQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRN 892 (950)
Q Consensus 813 i~k~i~~~l~~N~~~~~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~p~~~l~~~~P~~~~~~li~~~~~~~ 892 (950)
|+|+++|+++.|+..+++.+++.++..+.||+++|+||+|+++|.+|+++|++|||++++|+|||++++++++++.||++
T Consensus 680 i~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~ 759 (884)
T TIGR01522 680 IKNFITFQLSTSVAALSLIALATLMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKK 759 (884)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCCccCHHHHHH
Confidence 99999999999999999988888888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccccccCCCCcccccchHHhHHHHHHHHHHHHhcccC
Q 002230 893 ILGQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVCLSTCIRST 948 (950)
Q Consensus 893 i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~t~~F~~~v~~q~~n~~~~r~~ 948 (950)
+++++++++++.+++++.. +.. + .....++|++|++||+||+||.||||+.
T Consensus 760 ~~~~g~~~~~~~~~~~~~~--~~~--~-~~~~~~~t~~f~~~v~~q~~~~~~~r~~ 810 (884)
T TIGR01522 760 ILVSAIIIVVGTLFVFVRE--MQD--G-VITARDTTMTFTCFVFFDMFNALACRSQ 810 (884)
T ss_pred HHHHHHHHHHHHHHHHHHH--HcC--C-cchhhHHHHHHHHHHHHHHHHHHHHccC
Confidence 9999999987766655432 111 1 1123568999999999999999999984
No 7
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-132 Score=1229.00 Aligned_cols=787 Identities=37% Similarity=0.543 Sum_probs=692.9
Q ss_pred HHHHHhCCCccCCCChhHHHHHHHHhhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhccccCCCCCcch
Q 002230 123 GIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHD 202 (950)
Q Consensus 123 ~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~il~i~a~~s~~~~~~~~~~~~~~~d 202 (950)
.+...+.++...||+.++ +.+|+..||.|+++..+..++|+.++.+|+++++++|+++++++++++....+. .+
T Consensus 32 ~~~~~~~~~~~~GLs~~e--~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~----~~ 105 (917)
T COG0474 32 ELLLELFTSPTTGLSEEE--VKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVGDWVDAG----VD 105 (917)
T ss_pred hHHHhhcCCcccCCCHHH--HHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccC----cc
Confidence 566778888899999966 999999999999999999999999999999999999999999999988532110 45
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcCCeEEEEeCCeEEEEecCCcCCCcEEEeCCCCeecccEEEEeecce
Q 002230 203 GLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSV 282 (950)
Q Consensus 203 ~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g~~l 282 (950)
+..|...+++..++..+++|+.++..+++.+.. +.+++|+|||++++|+++||||||||.|++||+||||++|++++++
T Consensus 106 ~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~-~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~l 184 (917)
T COG0474 106 AIVILLVVVINALLGFVQEYRAEKALEALKKMS-SPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDL 184 (917)
T ss_pred eeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecCc
Confidence 556666777777888888988888888887755 5689999999999999999999999999999999999999999988
Q ss_pred EEEcccccCCCCccccc-------------CCCCeEEeccEEeeceEEEEEEEEeeccchhhHhhhhcCCCCCCChhHHH
Q 002230 283 LINESSLTGESEPVNVN-------------ALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVK 349 (950)
Q Consensus 283 ~VDeS~LTGEs~pv~k~-------------~~~~~l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~~~~~~~~tplq~~ 349 (950)
+||||+|||||.|+.|. ..++++|+||.|.+|.+.++|++||++|+.|++...+.......||+|++
T Consensus 185 ~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~~~t~l~~~ 264 (917)
T COG0474 185 EVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQRK 264 (917)
T ss_pred eEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccccccCCcHHHH
Confidence 99999999999999995 34688999999999999999999999999999999999886677999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Q 002230 350 LNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMK 429 (950)
Q Consensus 350 l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~lav~l~l~~~~~ 429 (950)
++++..++..++++++++++++... .. +. .+...|..++++++.++|+|||+.++++++.+++
T Consensus 265 l~~~~~~l~~~~l~~~~~~~~~~~~---~~----~~----------~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~ 327 (917)
T COG0474 265 LNKLGKFLLVLALVLGALVFVVGLF---RG----GN----------GLLESFLTALALAVAAVPEGLPAVVTIALALGAQ 327 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH---hc----Cc----------cHHHHHHHHHHHHHhccccchHHHHHHHHHHHHH
Confidence 9999999999998888888776521 10 00 2567899999999999999999999999999999
Q ss_pred HHhccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeeeccCCCCCCCCCCCCChHHHHHHHHHHHhcC
Q 002230 430 KMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNT 509 (950)
Q Consensus 430 ~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~ 509 (950)
+|.+++++||+++++|+||++++||||||||||+|+|+|.+++..+...+.+ ..... ..+....+...+++||
T Consensus 328 ~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~------~~~~~-~~~~~~~~l~~~~lc~ 400 (917)
T COG0474 328 RMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDID------DKDLK-DSPALLRFLLAAALCN 400 (917)
T ss_pred HHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCccccc------ccccc-cchHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999985110000 00111 1122223455666777
Q ss_pred CCceeecCCCceeecCChhhhHHHHHHHHcCC--ChHHHhhhcceEEEecCCCCCceEEEEEEcCCCcEEEEEcCchHHH
Q 002230 510 GGEVVIGEGNKTEILGTPTETAILEFGLLLGG--DFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEII 587 (950)
Q Consensus 510 ~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~--~~~~~~~~~~i~~~~pF~s~~k~msvvv~~~~~~~~~~~KGa~e~i 587 (950)
+.....+ + ++..|||+|.||++++.+.|. +....+..+++++++||+|+||||+++++..++++.+++|||||.|
T Consensus 401 ~~~~~~~-~--~~~~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~i 477 (917)
T COG0474 401 SVTPEKN-G--WYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVI 477 (917)
T ss_pred ccccccc-C--ceecCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHH
Confidence 7666544 3 777999999999999999998 7777778889999999999999999999977777999999999999
Q ss_pred HHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCCCC-CCCCCceEEEeeeeccCCCCccHH
Q 002230 588 LAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADA-PIPTEGYTCIGIVGIKDPMRPGVK 666 (950)
Q Consensus 588 l~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~~~-~~~e~~l~~lG~~~i~D~lr~~~~ 666 (950)
+++|++. ++..+++++.++.+++..++|+++|||++++|||.++..+.... +..|+|++|+|+++|+||||++++
T Consensus 478 l~~~~~~----~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~ 553 (917)
T COG0474 478 LERCKSI----GELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVK 553 (917)
T ss_pred HHHhccc----CcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHH
Confidence 9999976 67778999999999999999999999999999997766533222 567899999999999999999999
Q ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC--ceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHHHH
Q 002230 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN--GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKH 744 (950)
Q Consensus 667 ~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~--~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~ 744 (950)
++|+.|++|||++||+||||+.||.+||++||+..+. ..+++|.+++.++++++.+.+.++.||||++|+||.++|+.
T Consensus 554 ~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~qK~~IV~~ 633 (917)
T COG0474 554 EAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEA 633 (917)
T ss_pred HHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHHHHHHHHHH
Confidence 9999999999999999999999999999999998776 45999999999999999999999999999999999999999
Q ss_pred HhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002230 745 LRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVN 824 (950)
Q Consensus 745 l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~N 824 (950)
||++ |++|+|||||+||+||||+||||||||++|+|+||++||+++.+|+|..++.+++|||++|.|++|+++|.+++|
T Consensus 634 lq~~-g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n 712 (917)
T COG0474 634 LQKS-GHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKN 712 (917)
T ss_pred HHhC-CCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 9999 999999999999999999999999999899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCC-CChhHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCCCcCHHHHHHHHHHHHHHHHH
Q 002230 825 VVALIVNFSSACLTGN-APLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLI 903 (950)
Q Consensus 825 ~~~~~~~~~~~~~~~~-~pl~~~qll~~nli~d~l~~lal~~e~p~~~l~~~~P~~~~~~li~~~~~~~i~~~~~~~~~~ 903 (950)
+..+++.+++.++..+ .||+++|+||+|+++|++|+++|+.++|+.++|++||+++.++++++..+..++++..++.++
T Consensus 713 ~~~~~~~~~~~~~~~~~~p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i 792 (917)
T COG0474 713 VGEVLTLLIYSLFNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAI 792 (917)
T ss_pred HHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHHHHHHHHHHHHHHH
Confidence 9999999888887776 899999999999999999999999999999999999999999999999888877777777777
Q ss_pred HHHHHHhcccccccCC---CCc-ccccchHHhHHHHHHHHHHHHhcccC
Q 002230 904 IWYLQTRGKAVFRLDG---PDP-DLILNTLIFNTFVFCQVCLSTCIRST 948 (950)
Q Consensus 904 ~~~l~~~~~~~~~~~~---~~~-~~~~~t~~F~~~v~~q~~n~~~~r~~ 948 (950)
+.++.|....+..... ... ....+|+.|++++++|+++.+++|..
T Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~~~~ 841 (917)
T COG0474 793 LFILTFLLYLLGFIANTLGLDLFQALLQTTAFTVLVLIQLLLTLAVRSR 841 (917)
T ss_pred HHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 7666554332222111 111 34578999999999999999999986
No 8
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=9.8e-128 Score=1187.25 Aligned_cols=765 Identities=25% Similarity=0.380 Sum_probs=653.4
Q ss_pred CHHHHHHHhCCCccCCCChhHHHHHHHHhhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhccc---cCC
Q 002230 120 GVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIAT---EGW 196 (950)
Q Consensus 120 ~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~il~i~a~~s~~~~~~~---~~~ 196 (950)
..+.+.+.|+++. .||++++ +++|+++||+|+++.++.+++|+.++++|+++++++|+++++++++++.+. ++.
T Consensus 31 ~~~~v~~~l~~~~-~GLs~~e--a~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~ 107 (903)
T PRK15122 31 SLEETLANLNTHR-QGLTEED--AAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRGE 107 (903)
T ss_pred CHHHHHHHhCCCC-CCCCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCCc
Confidence 5677888899984 7999987 999999999999999999999999999999999999999999999987542 122
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcCCeEEEEeCC------eEEEEecCCcCCCcEEEeCCCCee
Q 002230 197 PKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNG------FRRKISIYDLLPGDIVHLCMGDQV 270 (950)
Q Consensus 197 ~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g------~~~~I~~~dLvvGDiV~l~~Gd~v 270 (950)
...|.+++.|++.+++..++..+++|+.+++.++|.+.. +..++|+||| ++++|+++||||||+|.|++||+|
T Consensus 108 ~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~-~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~I 186 (903)
T PRK15122 108 ETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMV-RTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMI 186 (903)
T ss_pred cccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEE
Confidence 246899999988888888999999999999999988754 4589999994 789999999999999999999999
Q ss_pred cccEEEEeecceEEEcccccCCCCcccccC----------------------CCCeEEeccEEeeceEEEEEEEEeeccc
Q 002230 271 PADGLFVSGFSVLINESSLTGESEPVNVNA----------------------LNPFLLSGTKVQNGSCKMLVTTVGMRTQ 328 (950)
Q Consensus 271 PaDgill~g~~l~VDeS~LTGEs~pv~k~~----------------------~~~~l~sGt~v~~G~~~~~V~~~G~~T~ 328 (950)
||||++++|+++.||||+|||||.|+.|.. .++.+|+||.|.+|+++++|++||.+|+
T Consensus 187 PaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T~ 266 (903)
T PRK15122 187 PADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTY 266 (903)
T ss_pred eeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccccH
Confidence 999999999889999999999999999964 1267999999999999999999999999
Q ss_pred hhhHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHH
Q 002230 329 WGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIV 408 (950)
Q Consensus 329 ~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~il 408 (950)
+|+|.+++.+ ...++|+|++++++++++..+++.++.+++++.. +. .+ .+...+..+++++
T Consensus 267 ~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~---~~----~~-----------~~~~~l~~aisl~ 327 (903)
T PRK15122 267 FGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLING---FT----KG-----------DWLEALLFALAVA 327 (903)
T ss_pred hhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhh---hc----cC-----------CHHHHHHHHHHHH
Confidence 9999999887 5566999999999999888877666554443321 11 00 3556788899999
Q ss_pred HHHhcCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeeeccCCCCCCC
Q 002230 409 VVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPA 488 (950)
Q Consensus 409 vvavP~~L~lav~l~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~ 488 (950)
+++||||||++++++++.++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++..+..
T Consensus 328 V~~~Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~----------- 396 (903)
T PRK15122 328 VGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGR----------- 396 (903)
T ss_pred HHHccchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCC-----------
Confidence 999999999999999999999999999999999999999999999999999999999999987632211
Q ss_pred CCCCCChHHHHHHHHHHHhcCCCceeecCCCceeecCChhhhHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEE
Q 002230 489 FGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVV 568 (950)
Q Consensus 489 ~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~pF~s~~k~msvv 568 (950)
.+++. +..+. .|+.. . ...+||+|.|+++++.+.+.+ ..+..++.++.+||+|.+|+|+++
T Consensus 397 ----~~~~~---l~~a~-l~s~~--~-------~~~~~p~e~All~~a~~~~~~--~~~~~~~~~~~~pF~s~~k~ms~v 457 (903)
T PRK15122 397 ----KDERV---LQLAW-LNSFH--Q-------SGMKNLMDQAVVAFAEGNPEI--VKPAGYRKVDELPFDFVRRRLSVV 457 (903)
T ss_pred ----ChHHH---HHHHH-HhCCC--C-------CCCCChHHHHHHHHHHHcCch--hhhhcCceEEEeeeCCCcCEEEEE
Confidence 01122 22222 23211 0 126899999999999876643 233467888999999999999999
Q ss_pred EEcCCCcEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCC--CCCCCC
Q 002230 569 IELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSA--DAPIPT 646 (950)
Q Consensus 569 v~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~--~~~~~e 646 (950)
++..++++++++||+||.++++|+++. .+|...+++++.++++.+..++++++|+|++++|||+++.++.. .....|
T Consensus 458 ~~~~~~~~~~~~KGa~e~il~~c~~~~-~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e 536 (903)
T PRK15122 458 VEDAQGQHLLICKGAVEEMLAVATHVR-DGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTADE 536 (903)
T ss_pred EEcCCCcEEEEECCcHHHHHHhchhhh-cCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCccccccccccccc
Confidence 987667788999999999999999765 46777899999999999999999999999999999988654221 112346
Q ss_pred CceEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhcc
Q 002230 647 EGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPK 726 (950)
Q Consensus 647 ~~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~ 726 (950)
+|++|+|+++++||+||+++++|++|+++||+++|+|||++.||.++|+++||.. +.+++|++++.++++++.+.+++
T Consensus 537 ~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~--~~vi~G~el~~~~~~el~~~v~~ 614 (903)
T PRK15122 537 RDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP--GEPLLGTEIEAMDDAALAREVEE 614 (903)
T ss_pred cCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC--CCccchHhhhhCCHHHHHHHhhh
Confidence 7899999999999999999999999999999999999999999999999999953 46899999999999999999999
Q ss_pred ccEEeecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHHH
Q 002230 727 IQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWG 806 (950)
Q Consensus 727 ~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~g 806 (950)
..||||++|+||.++|+.||++ |++|+|||||+||+|||++|||||||| +|+|+||++||+|+++|||++|++++++|
T Consensus 615 ~~VfAr~sPe~K~~iV~~Lq~~-G~vVamtGDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~f~~Iv~ai~~g 692 (903)
T PRK15122 615 RTVFAKLTPLQKSRVLKALQAN-GHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESADIILLEKSLMVLEEGVIKG 692 (903)
T ss_pred CCEEEEeCHHHHHHHHHHHHhC-CCEEEEECCCchhHHHHHhCCEEEEeC-cccHHHHHhcCEEEecCChHHHHHHHHHH
Confidence 9999999999999999999999 999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCCCcC
Q 002230 807 RSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFIS 886 (950)
Q Consensus 807 R~~~~~i~k~i~~~l~~N~~~~~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~p~~~l~~~~P~~~~~~li~ 886 (950)
|++|+||+|+++|+++.|+..+++.+++.++..+.|++++|+||+|+++|+ |+++|++|||++++| |||+++++++++
T Consensus 693 R~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~~nli~D~-~~lal~~d~~~~~~m-~~P~~~~~~~~~ 770 (903)
T PRK15122 693 RETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLLQNLMYDI-SQLSLPWDKMDKEFL-RKPRKWDAKNIG 770 (903)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHH-HHHhhcCCCCCHhhc-CCCCCCChhhhH
Confidence 999999999999999999998888777777777789999999999999996 899999999999999 999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCcccccchHHhHHHHHHHHHHHHhcccC
Q 002230 887 NVMWRNILGQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVCLSTCIRST 948 (950)
Q Consensus 887 ~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~t~~F~~~v~~q~~n~~~~r~~ 948 (950)
+.|+...+..+++.+..++ ++++. +...........+|..|.+++++|+||.||||+-
T Consensus 771 ~~~~~~g~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~t~~f~~l~~~q~~~~~~~R~~ 828 (903)
T PRK15122 771 RFMLWIGPTSSIFDITTFA-LMWFV---FAANSVEMQALFQSGWFIEGLLSQTLVVHMLRTQ 828 (903)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHH---hccCcHhhhhhhHHHHHHHHHHHHHHHHHhhCcC
Confidence 9888643333333332222 22211 1111100011246888999999999999999985
No 9
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=3.6e-127 Score=1180.10 Aligned_cols=759 Identities=24% Similarity=0.374 Sum_probs=643.3
Q ss_pred CHHHHHHHhCCCccCCCChhHHHHHHHHhhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhccccCCCCC
Q 002230 120 GVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKG 199 (950)
Q Consensus 120 ~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~il~i~a~~s~~~~~~~~~~~~~ 199 (950)
..+.+.+.|+++. .||++++ +++|+++||+|+++.++++++|+.+|++|+++++++++++++++++.+ .
T Consensus 53 ~~~~v~~~l~~~~-~GLs~~e--a~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~--------~ 121 (902)
T PRK10517 53 PEEELWKTFDTHP-EGLNEAE--VESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE--------D 121 (902)
T ss_pred CHHHHHHHhCCCC-CCCCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc--------c
Confidence 5778888899987 6999987 999999999999999999999999999999999999999999998875 5
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcCCeEEEEeC------CeEEEEecCCcCCCcEEEeCCCCeeccc
Q 002230 200 AHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARN------GFRRKISIYDLLPGDIVHLCMGDQVPAD 273 (950)
Q Consensus 200 ~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~------g~~~~I~~~dLvvGDiV~l~~Gd~vPaD 273 (950)
|.+++.|++.+++..+++.+.+++.++..++|.+.. +.+++|+|| |++++|+++||||||+|.|++||+||||
T Consensus 122 ~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~-~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaD 200 (902)
T PRK10517 122 LFAAGVIALMVAISTLLNFIQEARSTKAADALKAMV-SNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPAD 200 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeee
Confidence 888988888888888888888888888888887754 458999999 7899999999999999999999999999
Q ss_pred EEEEeecceEEEcccccCCCCcccccCCC------------CeEEeccEEeeceEEEEEEEEeeccchhhHhhhhcCCCC
Q 002230 274 GLFVSGFSVLINESSLTGESEPVNVNALN------------PFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGD 341 (950)
Q Consensus 274 gill~g~~l~VDeS~LTGEs~pv~k~~~~------------~~l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~~~~~~ 341 (950)
|++++|+++.||||+|||||.|+.|..++ +.+|+||.|.+|+++++|++||.+|++|+|.+.+.+...
T Consensus 201 g~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~~ 280 (902)
T PRK10517 201 LRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDS 280 (902)
T ss_pred EEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccCC
Confidence 99999988999999999999999997543 479999999999999999999999999999999998888
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHHHHH
Q 002230 342 DETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVT 421 (950)
Q Consensus 342 ~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~lav~ 421 (950)
+++|+|+.++++++++..++++++.++++++.. . .+ .+...+..++++++++||||||++++
T Consensus 281 ~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~---~----~~-----------~~~~~l~~alsv~V~~~Pe~LP~~vt 342 (902)
T PRK10517 281 EPNAFQQGISRVSWLLIRFMLVMAPVVLLINGY---T----KG-----------DWWEAALFALSVAVGLTPEMLPMIVT 342 (902)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHH---h----cC-----------CHHHHHHHHHHHHHHHcccHHHHHHH
Confidence 889999999999999988887777666554321 1 00 24567888999999999999999999
Q ss_pred HHHHHHHHHHhccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeeeccCCCCCCCCCCCCChHHHHHH
Q 002230 422 LSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLL 501 (950)
Q Consensus 422 l~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 501 (950)
++++.++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++... . .++ .+++
T Consensus 343 ~~la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~------~----------~~~--~~ll 404 (902)
T PRK10517 343 STLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDIS------G----------KTS--ERVL 404 (902)
T ss_pred HHHHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCC------C----------CCH--HHHH
Confidence 999999999999999999999999999999999999999999999998763110 0 001 1222
Q ss_pred HHHHHhcCCCceeecCCCceeecCChhhhHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEcCCCcEEEEEc
Q 002230 502 LQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCK 581 (950)
Q Consensus 502 ~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~pF~s~~k~msvvv~~~~~~~~~~~K 581 (950)
...+.|+.. . ...+||+|.|+++++...+ .......++.++.+||+|++|+|+++++..++.+.+++|
T Consensus 405 -~~a~l~~~~--~-------~~~~~p~d~All~~a~~~~--~~~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~K 472 (902)
T PRK10517 405 -HSAWLNSHY--Q-------TGLKNLLDTAVLEGVDEES--ARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICK 472 (902)
T ss_pred -HHHHhcCCc--C-------CCCCCHHHHHHHHHHHhcc--hhhhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEe
Confidence 223333321 1 1168999999999986543 122345678889999999999999998876777889999
Q ss_pred CchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeeccCCC
Q 002230 582 GASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPM 661 (950)
Q Consensus 582 Ga~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~l 661 (950)
|+||.++++|+++. .+|...+++++.++++.+..++++++|+|++++|||+++.+........|+|++|+|+++|+||+
T Consensus 473 Ga~e~il~~c~~~~-~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~ 551 (902)
T PRK10517 473 GALEEILNVCSQVR-HNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPP 551 (902)
T ss_pred CchHHHHHhchhhh-cCCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCccccccccccccCceeeehHhhhCcc
Confidence 99999999999775 45677899999899999999999999999999999988654322112236799999999999999
Q ss_pred CccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHH
Q 002230 662 RPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTL 741 (950)
Q Consensus 662 r~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~ 741 (950)
||+++++|++|+++||+++|+||||+.||.++|+++||. ++.+++|++++.++++++.+.++++.||||++|+||.++
T Consensus 552 R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~--~~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~I 629 (902)
T PRK10517 552 KETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLD--AGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKERI 629 (902)
T ss_pred hhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC--ccCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHHH
Confidence 999999999999999999999999999999999999995 347999999999999999999999999999999999999
Q ss_pred HHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 002230 742 VKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQL 821 (950)
Q Consensus 742 V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l 821 (950)
|+.||++ |++|+|||||+||+|||++|||||||| +|+|+||++||+|+++|||.+|++++++||++|+||+|+++|++
T Consensus 630 V~~Lq~~-G~vVam~GDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~l 707 (902)
T PRK10517 630 VTLLKRE-GHVVGFMGDGINDAPALRAADIGISVD-GAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTA 707 (902)
T ss_pred HHHHHHC-CCEEEEECCCcchHHHHHhCCEEEEeC-CcCHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998 999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCChhHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCCCcCHHHHHHHHHHHHHHH
Q 002230 822 TVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQF 901 (950)
Q Consensus 822 ~~N~~~~~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~p~~~l~~~~P~~~~~~li~~~~~~~i~~~~~~~~ 901 (950)
+.|+..++..+++.++..+.||+|+|+||+|+++| +|+++|++|||++++|+|||+ ++...+.+.|+..-+..+++.+
T Consensus 708 s~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D-~~~~al~~d~~~~~~m~~p~r-~~~~~~~~~~~~~g~~~~~~~~ 785 (902)
T PRK10517 708 SSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYD-VSQVAIPFDNVDDEQIQKPQR-WNPADLGRFMVFFGPISSIFDI 785 (902)
T ss_pred HhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH-HhHHhhcCCCCChhhhcCCCC-CCHHHHHHHHHHHHHHHHHHHH
Confidence 99999998888877776668999999999999999 689999999999999999997 3333344444332222232222
Q ss_pred HHHHHHHHhcccccccCCCCcccccchHHhHHHHHHHHHHHHhcccCC
Q 002230 902 LIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVCLSTCIRSTE 949 (950)
Q Consensus 902 ~~~~~l~~~~~~~~~~~~~~~~~~~~t~~F~~~v~~q~~n~~~~r~~~ 949 (950)
..++++++ .++...+......+|..|.+++++|+||.+|||+-.
T Consensus 786 ~~~~~~~~----~~~~~~~~~~~~~~~~~F~~~~~~q~~~~~~~R~~~ 829 (902)
T PRK10517 786 LTFCLMWW----VFHANTPETQTLFQSGWFVVGLLSQTLIVHMIRTRR 829 (902)
T ss_pred HHHHHHHH----HccccchhhHhHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 22222211 112110000012344559999999999999999853
No 10
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=1.8e-126 Score=1175.42 Aligned_cols=758 Identities=25% Similarity=0.350 Sum_probs=645.4
Q ss_pred cCHHHHHHHhCCCccCCCChhHHHHHHHHhhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhccccCCCC
Q 002230 119 GGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPK 198 (950)
Q Consensus 119 ~~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~il~i~a~~s~~~~~~~~~~~~ 198 (950)
.+++++.+.|+++. .||++++ +.+|+++||+|+++.++.+++|+.++++|+++++++|+++++++++.+
T Consensus 18 ~~~~~~~~~l~~~~-~GLs~~e--v~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~-------- 86 (867)
T TIGR01524 18 MGKETLLRKLGVHE-TGLTNVE--VTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTD-------- 86 (867)
T ss_pred CCHHHHHHHhCCCC-CCCCHHH--HHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHh--------
Confidence 36888999999986 6999987 999999999999999988999999999999999999999999998875
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcCCeEEEEe------CCeEEEEecCCcCCCcEEEeCCCCeecc
Q 002230 199 GAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVAR------NGFRRKISIYDLLPGDIVHLCMGDQVPA 272 (950)
Q Consensus 199 ~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R------~g~~~~I~~~dLvvGDiV~l~~Gd~vPa 272 (950)
.|++++.|++.+++..+++.+.+++.++..++|.+.. +.+++|+| ||++++|+++||||||+|.|++||+|||
T Consensus 87 ~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~-~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPa 165 (867)
T TIGR01524 87 DLEATVIIALMVLASGLLGFIQESRAERAAYALKNMV-KNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPA 165 (867)
T ss_pred hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhc-cCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcc
Confidence 5888998888888888888899998888888887754 45899999 9999999999999999999999999999
Q ss_pred cEEEEeecceEEEcccccCCCCcccccCCC------------CeEEeccEEeeceEEEEEEEEeeccchhhHhhhhcCCC
Q 002230 273 DGLFVSGFSVLINESSLTGESEPVNVNALN------------PFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGG 340 (950)
Q Consensus 273 Dgill~g~~l~VDeS~LTGEs~pv~k~~~~------------~~l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~~~~~ 340 (950)
||++++|+++.||||+|||||.|+.|..++ +++|+||.|.+|+++++|++||.+|++|++.+++.+ .
T Consensus 166 Dg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~-~ 244 (867)
T TIGR01524 166 DARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATE-R 244 (867)
T ss_pred cEEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhC-C
Confidence 999999988999999999999999997543 479999999999999999999999999999999988 6
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHHHH
Q 002230 341 DDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420 (950)
Q Consensus 341 ~~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~lav 420 (950)
.+++|+|++++++++++..+++++++++++++.. . .+ .+...+..++++++++||||||+++
T Consensus 245 ~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~---~----~~-----------~~~~~~~~al~l~v~~iP~~Lp~~v 306 (867)
T TIGR01524 245 RGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGL---M----KG-----------DWLEAFLFALAVAVGLTPEMLPMIV 306 (867)
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHH---h----cC-----------CHHHHHHHHHHHHHHhCcchHHHHH
Confidence 6679999999999999999888877766655321 0 01 2456788899999999999999999
Q ss_pred HHHHHHHHHHHhccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeeeccCCCCCCCCCCCCChHHHHH
Q 002230 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKL 500 (950)
Q Consensus 421 ~l~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (950)
+++++.++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++..... + ..++
T Consensus 307 t~~la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~~----------------~--~~~~ 368 (867)
T TIGR01524 307 SSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSGE----------------T--SERV 368 (867)
T ss_pred HHHHHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCCC----------------C--HHHH
Confidence 999999999999999999999999999999999999999999999999887521110 0 1122
Q ss_pred HHHHHHhcCCCceeecCCCceeecCChhhhHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEcCCCcEEEEE
Q 002230 501 LLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHC 580 (950)
Q Consensus 501 l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~pF~s~~k~msvvv~~~~~~~~~~~ 580 (950)
+.. .+.|+.. . ...+||+|.|+++++.... ....+..++.++.+||+|++|+|+++++.+++.+++++
T Consensus 369 l~~-a~l~~~~--~-------~~~~~p~~~Al~~~~~~~~--~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~ 436 (867)
T TIGR01524 369 LKM-AWLNSYF--Q-------TGWKNVLDHAVLAKLDESA--ARQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLIC 436 (867)
T ss_pred HHH-HHHhCCC--C-------CCCCChHHHHHHHHHHhhc--hhhHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEE
Confidence 222 2333221 1 1157999999999986532 22334567888999999999999999886655688999
Q ss_pred cCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeeccCC
Q 002230 581 KGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660 (950)
Q Consensus 581 KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~ 660 (950)
||+||.++++|+++. .+|...+++++.++++++.+++|+++|+|++++|||+++.++.......+++++++|+++++||
T Consensus 437 KGa~e~il~~c~~~~-~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp 515 (867)
T TIGR01524 437 KGAVEEMLTVCTHKR-FGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDP 515 (867)
T ss_pred eCcHHHHHHhchhhh-cCCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCcccccccccccCCcEEEEEEEeeCC
Confidence 999999999998764 4677788999888899999999999999999999998865432111223678999999999999
Q ss_pred CCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHH
Q 002230 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHT 740 (950)
Q Consensus 661 lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~ 740 (950)
+||+++++|++|+++||+++|+|||+..||.++|+++||.. +.+++|.+++.++++++.+.++++.||||++|+||.+
T Consensus 516 ~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~--~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~ 593 (867)
T TIGR01524 516 PKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA--NDFLLGADIEELSDEELARELRKYHIFARLTPMQKSR 593 (867)
T ss_pred CchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC--CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHH
Confidence 99999999999999999999999999999999999999964 3689999999999999999999999999999999999
Q ss_pred HHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 002230 741 LVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQ 820 (950)
Q Consensus 741 ~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~ 820 (950)
+|+.+|++ |++|+|+|||+||+|||++|||||||| +|+|+||++||+|+++|||++|++++++||++|+||+|+++|+
T Consensus 594 iV~~lq~~-G~vVam~GDGvNDapALk~AdVGIAmg-~gtdvAk~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ 671 (867)
T TIGR01524 594 IIGLLKKA-GHTVGFLGDGINDAPALRKADVGISVD-TAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMT 671 (867)
T ss_pred HHHHHHhC-CCEEEEECCCcccHHHHHhCCEEEEeC-CccHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999 999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCChhHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCCCcCHHHHHHHHHHHHHH
Q 002230 821 LTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQ 900 (950)
Q Consensus 821 l~~N~~~~~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~p~~~l~~~~P~~~~~~li~~~~~~~i~~~~~~~ 900 (950)
++.|+..++..+++.++..+.||+++|+||+|+++| +|+++|++|||++++|++||+ ++++.+.+.+ +..+++.
T Consensus 672 ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d-~~~~al~~~~~~~~~m~~p~~-~~~~~~~~~~----~~~g~~~ 745 (867)
T TIGR01524 672 ASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYD-FSQLTLPWDKMDREFLKKPHQ-WEQKGMGRFM----LCIGPVS 745 (867)
T ss_pred HhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-HHHHhhcCCCCChHhhCCCCC-CChhhHHHHH----HHHHHHH
Confidence 999999988888777776668999999999999999 699999999999999987666 6665544443 3344443
Q ss_pred HHHHHHHHHhcccccccCCCCcccccchHHhHHHHHHHHHHHHhcccC
Q 002230 901 FLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVCLSTCIRST 948 (950)
Q Consensus 901 ~~~~~~l~~~~~~~~~~~~~~~~~~~~t~~F~~~v~~q~~n~~~~r~~ 948 (950)
+++.+..++.....+...+.......+|..|.+++++|+||.||||+-
T Consensus 746 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~R~~ 793 (867)
T TIGR01524 746 SIFDIATFLLMWFVFSANTVEEQALFQSGWFVVGLLSQTLVVHMIRTE 793 (867)
T ss_pred HHHHHHHHHHHHHHhcccchhhhhHHHHHHHHHHHHHHHHHHHhhCcC
Confidence 322222111111111111111111247888999999999999999975
No 11
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=1.8e-125 Score=1176.17 Aligned_cols=770 Identities=32% Similarity=0.458 Sum_probs=658.7
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHhhccccCCC--CCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcCCeEEEEe
Q 002230 167 VWEALHDMTLMILAVCALVSLVVGIATEGWP--KGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVAR 244 (950)
Q Consensus 167 ~~~~~~~~~~~il~i~a~~s~~~~~~~~~~~--~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R 244 (950)
++++|+++++++|++++++|++++...++.+ ..|+|++.|++.+++...++.+++++.++..++|.+ ..+.+++|+|
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~-~~~~~~~ViR 79 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKE-YESEHAKVLR 79 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCCceEEEE
Confidence 4789999999999999999999987653332 579999999999999999999999999999999876 4566899999
Q ss_pred CCeEEEEecCCcCCCcEEEeCCCCeecccEEEEeecceEEEcccccCCCCcccccCC------------CCeEEeccEEe
Q 002230 245 NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNAL------------NPFLLSGTKVQ 312 (950)
Q Consensus 245 ~g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g~~l~VDeS~LTGEs~pv~k~~~------------~~~l~sGt~v~ 312 (950)
||++++|+++||||||+|.|++||+|||||++++|++|.||||+|||||.|+.|.++ ++++|+||.+.
T Consensus 80 dg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~ 159 (917)
T TIGR01116 80 DGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVV 159 (917)
T ss_pred CCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEe
Confidence 999999999999999999999999999999999998899999999999999999643 37899999999
Q ss_pred eceEEEEEEEEeeccchhhHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCc
Q 002230 313 NGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGD 392 (950)
Q Consensus 313 ~G~~~~~V~~~G~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~ 392 (950)
+|+++++|++||.+|+.|++.+++..++.++||+|+++++++..+..+++++++++++++...+... ..+ ..
T Consensus 160 ~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~--~~~------~~ 231 (917)
T TIGR01116 160 AGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDP--ALG------GG 231 (917)
T ss_pred cceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--ccc------ch
Confidence 9999999999999999999999999888889999999999999998888777777666543322110 000 01
Q ss_pred chHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEeeCCccccccCceEEEEEE
Q 002230 393 DALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKAC 472 (950)
Q Consensus 393 ~~~~~~~~~~~~i~ilvvavP~~L~lav~l~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~ 472 (950)
....+..++..++++++++|||+||+++++++++++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++
T Consensus 232 ~~~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~ 311 (917)
T TIGR01116 232 WIQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVV 311 (917)
T ss_pred hHHHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEE
Confidence 11245566778889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Eccee------eeccCCCCCCCC---C-----CCCChHHHHHHHHHHHhcCCCceeecCC-CceeecCChhhhHHHHHHH
Q 002230 473 ICEEI------KEVDNSKGTPAF---G-----SSIPASASKLLLQSIFNNTGGEVVIGEG-NKTEILGTPTETAILEFGL 537 (950)
Q Consensus 473 ~~~~~------~~~~~~~~~~~~---~-----~~~~~~~~~~l~~~i~~~~~~~~~~~~~-~~~~~~g~p~e~All~~a~ 537 (950)
..++. +...+....+.. . ....+...+.+.....+|+++.+..+++ +.+...|||+|.||++++.
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~ 391 (917)
T TIGR01116 312 ALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVE 391 (917)
T ss_pred ecCCcccccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHH
Confidence 86532 111111111100 0 0001223444556677777776654322 2344579999999999999
Q ss_pred HcCCChHH----------------HhhhcceEEEecCCCCCceEEEEEEcCCCcEEEEEcCchHHHHHhccccccCCCee
Q 002230 538 LLGGDFQA----------------ERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEV 601 (950)
Q Consensus 538 ~~g~~~~~----------------~~~~~~i~~~~pF~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~ 601 (950)
+.|.+... .++.+++++.+||+|+||||+++++.+ +++.+|+|||||.|++.|++++..+|..
T Consensus 392 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~~-~~~~~~~KGApe~il~~c~~~~~~~g~~ 470 (917)
T TIGR01116 392 KMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPS-TGNKLFVKGAPEGVLERCTHILNGDGRA 470 (917)
T ss_pred HcCCCchhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEeeC-CcEEEEEcCChHHHHHhccceecCCCCe
Confidence 88876442 245677999999999999999999864 6688999999999999999988777888
Q ss_pred ecCCHHHHHHHHHHHHHHHh-cccceeEEEEEEcCCCCC-------CCCCCCCCceEEEeeeeccCCCCccHHHHHHHHH
Q 002230 602 VPLNEAAVNHLNETIEKFAS-EALRTLCLACMEIGNEFS-------ADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICR 673 (950)
Q Consensus 602 ~~l~~~~~~~~~~~~~~~a~-~glR~l~~A~~~~~~~~~-------~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~ 673 (950)
.|++++.++++++.+++|++ +|+||+++|||.++.+.. ...+.+|++++|+|+++++||+|++++++|+.|+
T Consensus 471 ~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~ 550 (917)
T TIGR01116 471 VPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCR 550 (917)
T ss_pred eeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHH
Confidence 99999999999999999999 999999999999865311 1123468899999999999999999999999999
Q ss_pred HCCCEEEEEcCCCHHHHHHHHHHcCCccCCc----eeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHHHHHhhhC
Q 002230 674 SAGITVRMVTGDNINTAKAIARECGILTDNG----IAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTL 749 (950)
Q Consensus 674 ~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~----~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~ 749 (950)
++|++++|+|||+..||.++|+++|+..++. ..++|+++..++++++.+..++..||||++|+||.++|+.+|+.
T Consensus 551 ~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~- 629 (917)
T TIGR01116 551 TAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQ- 629 (917)
T ss_pred HCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhc-
Confidence 9999999999999999999999999986543 57899999999999999999999999999999999999999988
Q ss_pred CCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002230 750 GEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALI 829 (950)
Q Consensus 750 g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~N~~~~~ 829 (950)
|++|+|+|||.||+|||++|||||||| +|++++|++||+++.+|||.+|+++++|||++|+||+|+++|++++|+..++
T Consensus 630 g~~va~iGDG~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~ 708 (917)
T TIGR01116 630 GEIVAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVV 708 (917)
T ss_pred CCeEEEecCCcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 999999999999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCChhHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHH
Q 002230 830 VNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQT 909 (950)
Q Consensus 830 ~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~p~~~l~~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~l~~ 909 (950)
+.+++.++..+.||+++|++|+|+++|.+|+++|++|||++++|++||+.++++++++.+|+.|++++++|+++.+..++
T Consensus 709 ~~~~~~~~~~~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ 788 (917)
T TIGR01116 709 CIFLTAALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFV 788 (917)
T ss_pred HHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998888888999999999999999999999999999999999999999999999999999999999999977544332
Q ss_pred hcc---cccc--------cC---CC-----CcccccchHHhHHHHHHHHHHHHhcccC
Q 002230 910 RGK---AVFR--------LD---GP-----DPDLILNTLIFNTFVFCQVCLSTCIRST 948 (950)
Q Consensus 910 ~~~---~~~~--------~~---~~-----~~~~~~~t~~F~~~v~~q~~n~~~~r~~ 948 (950)
+.. .+.. .+ +. +.....+|++|++||+||+||.||||+.
T Consensus 789 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~ 846 (917)
T TIGR01116 789 WWYLLTHFTGCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSE 846 (917)
T ss_pred HHHhhcCcccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCC
Confidence 211 1111 01 00 0124568999999999999999999985
No 12
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=3e-118 Score=1089.23 Aligned_cols=718 Identities=24% Similarity=0.361 Sum_probs=611.5
Q ss_pred CCChhHHHHHHHHhhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhccccCCCCCcchhHHHHHHHHHHH
Q 002230 135 GISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVV 214 (950)
Q Consensus 135 Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~il~i~a~~s~~~~~~~~~~~~~~~d~~~i~~~illv~ 214 (950)
||++++ +++|+++||+|+++. +.+++|+.++++|+++++++++++++++++++ .|+|++.|++.+++..
T Consensus 1 GLs~~e--a~~r~~~~G~N~~~~-~~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~--------~~~~~~~i~~~~~i~~ 69 (755)
T TIGR01647 1 GLTSAE--AKKRLAKYGPNELPE-KKVSPLLKFLGFFWNPLSWVMEAAAIIAIALE--------NWVDFVIILGLLLLNA 69 (755)
T ss_pred CcCHHH--HHHHHHhcCCCCCCC-CCCCHHHHHHHHHhchHHHHHHHHHHHHHhhc--------chhhhhhhhhhhHHHH
Confidence 888877 999999999999987 45667899999999999999999999999886 5888988888888888
Q ss_pred HHHHHHHHHHHHHHHHhHhhhcCCeEEEEeCCeEEEEecCCcCCCcEEEeCCCCeecccEEEEeecceEEEcccccCCCC
Q 002230 215 FVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESE 294 (950)
Q Consensus 215 ~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g~~l~VDeS~LTGEs~ 294 (950)
.+..+++++.++..++|.+. .+.+++|+|||++++|+++||||||+|.|++||+|||||++++|+++.||||+|||||.
T Consensus 70 ~i~~~qe~~a~~~~~~L~~~-~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~ 148 (755)
T TIGR01647 70 TIGFIEENKAGNAVEALKQS-LAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESL 148 (755)
T ss_pred HHHHHHHHHHHHHHHHHHhh-CCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCcc
Confidence 88888898888888888764 45689999999999999999999999999999999999999999878999999999999
Q ss_pred cccccCCCCeEEeccEEeeceEEEEEEEEeeccchhhHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002230 295 PVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQ 374 (950)
Q Consensus 295 pv~k~~~~~~l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~ 374 (950)
|+.|..++ .+|+||.|.+|+++++|++||.+|++|+|.+++.+.+.+++|+|+.+++++.++.++.+++++++++++..
T Consensus 149 PV~K~~~~-~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~ 227 (755)
T TIGR01647 149 PVTKKTGD-IAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFF 227 (755)
T ss_pred ceEeccCC-eeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998765 69999999999999999999999999999999998888889999999999999988888877777665432
Q ss_pred HHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEe
Q 002230 375 GLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSIC 454 (950)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~lav~l~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~ 454 (950)
. . + .++...+..++++++++|||+||+++|++++.++++|+|+|++||+++++|+||++|+||
T Consensus 228 ~--~-----~----------~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~ 290 (755)
T TIGR01647 228 G--R-----G----------ESFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILC 290 (755)
T ss_pred H--c-----C----------CCHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEE
Confidence 1 0 0 035567888999999999999999999999999999999999999999999999999999
Q ss_pred eCCccccccCceEEEEEEEcceeeeccCCCCCCCCCCCCChHHHHHHHHHHHhcCCCceeecCCCceeecCChhhhHHHH
Q 002230 455 SDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILE 534 (950)
Q Consensus 455 ~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~ 534 (950)
||||||||+|+|+|.+++..++.+ +++ +++..+.. |+. ..++||+|.|+++
T Consensus 291 ~DKTGTLT~~~~~v~~~~~~~~~~---------------~~~--~~l~~a~~-~~~-----------~~~~~pi~~Ai~~ 341 (755)
T TIGR01647 291 SDKTGTLTLNKLSIDEILPFFNGF---------------DKD--DVLLYAAL-ASR-----------EEDQDAIDTAVLG 341 (755)
T ss_pred ecCCCccccCceEEEEEEecCCCC---------------CHH--HHHHHHHH-hCC-----------CCCCChHHHHHHH
Confidence 999999999999999988643210 111 22322322 221 1267999999999
Q ss_pred HHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEcCC-CcEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHH
Q 002230 535 FGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPE-GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLN 613 (950)
Q Consensus 535 ~a~~~g~~~~~~~~~~~i~~~~pF~s~~k~msvvv~~~~-~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~ 613 (950)
++.+.+ ..+..+++++.+||++.+|+|+++++.++ ++.+.++||+||.+++.|+.. ++.+++++
T Consensus 342 ~~~~~~----~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~-----------~~~~~~~~ 406 (755)
T TIGR01647 342 SAKDLK----EARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNK-----------KEIEEKVE 406 (755)
T ss_pred HHHHhH----HHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCc-----------HHHHHHHH
Confidence 886532 23456788899999999999999987654 667788999999999999742 34556788
Q ss_pred HHHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHH
Q 002230 614 ETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAI 693 (950)
Q Consensus 614 ~~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~i 693 (950)
+.+++++++|+|++++|||+ .+++++++|+++++||+||+++++|++|+++||+++|+|||++.||.++
T Consensus 407 ~~~~~~~~~G~rvl~vA~~~-----------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~I 475 (755)
T TIGR01647 407 EKVDELASRGYRALGVARTD-----------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKET 475 (755)
T ss_pred HHHHHHHhCCCEEEEEEEEc-----------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHH
Confidence 88999999999999999973 1468999999999999999999999999999999999999999999999
Q ss_pred HHHcCCccC---CceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCC
Q 002230 694 ARECGILTD---NGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD 770 (950)
Q Consensus 694 a~~~gi~~~---~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~Ad 770 (950)
|+++||... ...+.+|.+.+.++++++.+.+.++.||||++|+||.++|+.+|++ |++|+|+|||+||+|||++||
T Consensus 476 A~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~-G~~VamvGDGvNDapAL~~Ad 554 (755)
T TIGR01647 476 ARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKR-GHLVGMTGDGVNDAPALKKAD 554 (755)
T ss_pred HHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhc-CCEEEEEcCCcccHHHHHhCC
Confidence 999999652 2234556666788999999999999999999999999999999999 999999999999999999999
Q ss_pred cceeecCCCcHHHHhcCCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhHHHHHH
Q 002230 771 IGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLW 850 (950)
Q Consensus 771 vGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~N~~~~~~~~~~~~~~~~~pl~~~qll~ 850 (950)
|||||| +|+|+||++||+|+++|||.+|++++++||++|+||+|+++|+++.|+..+++.+++.++.+ .||+|+|+||
T Consensus 555 VGIAm~-~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~-~~l~~~~il~ 632 (755)
T TIGR01647 555 VGIAVA-GATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILN-FYFPPIMVVI 632 (755)
T ss_pred eeEEec-CCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhC-cchhHHHHHH
Confidence 999999 89999999999999999999999999999999999999999999999998877776665544 4699999999
Q ss_pred HHHHHHHHHHHHhccCCCCccccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhccc---ccccCCC-Cccccc
Q 002230 851 VNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKA---VFRLDGP-DPDLIL 926 (950)
Q Consensus 851 ~nli~d~l~~lal~~e~p~~~l~~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~l~~~~~~---~~~~~~~-~~~~~~ 926 (950)
+|+++|. +++++++|++++. |+|. ...+ +.+++.++..+++.++..+.++++... ++...+. ......
T Consensus 633 ~~l~~d~-~~~~l~~~~~~~~---~~p~---~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 704 (755)
T TIGR01647 633 IAILNDG-TIMTIAYDNVKPS---KLPQ---RWNL-REVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFGLQLLHGNL 704 (755)
T ss_pred HHHHHhH-hHhhccCCCCCCC---CCCC---ccch-HHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhcccccccHhhh
Confidence 9999997 6999999998752 4443 3333 367777777787777665555433221 1111111 112356
Q ss_pred chHHhHHHHHHHHHHHHhcccC
Q 002230 927 NTLIFNTFVFCQVCLSTCIRST 948 (950)
Q Consensus 927 ~t~~F~~~v~~q~~n~~~~r~~ 948 (950)
+|+.|.++++.|+||.|++|+-
T Consensus 705 ~t~~f~~~~~~~~~~~~~~r~~ 726 (755)
T TIGR01647 705 QSLIYLQVSISGQATIFVTRTH 726 (755)
T ss_pred HHHHHHHHHHHHHHHHheeccC
Confidence 8999999999999999999975
No 13
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=1.2e-114 Score=1092.73 Aligned_cols=751 Identities=23% Similarity=0.322 Sum_probs=602.8
Q ss_pred cCCCChhHHHHHHHHhhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhccccCCCCCcchhHHHHHHHHH
Q 002230 133 TDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILL 212 (950)
Q Consensus 133 ~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~il~i~a~~s~~~~~~~~~~~~~~~d~~~i~~~ill 212 (950)
..||+.++ +.+|++.||+|+++.+ .++||+++++++.+|++++++++.++.+.- +.|++++.|++.+++
T Consensus 137 ~~GLs~~e--~~~r~~~yG~N~i~~~-~~s~~~ll~~~~~~p~~i~~i~~~~l~~~~--------~~~~~~~~i~~i~~~ 205 (1054)
T TIGR01657 137 SNGLTTGD--IAQRKAKYGKNEIEIP-VPSFLELLKEEVLHPFYVFQVFSVILWLLD--------EYYYYSLCIVFMSST 205 (1054)
T ss_pred ccCCCHHH--HHHHHHhcCCCeeecC-CCCHHHHHHHHHhchHHHHHHHHHHHHHhh--------hhHHHHHHHHHHHHH
Confidence 46999887 9999999999999875 589999999999999998887775554432 257888877776666
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhhcCCeEEEEeCCeEEEEecCCcCCCcEEEeC--CCCeecccEEEEeecceEEEccccc
Q 002230 213 VVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLC--MGDQVPADGLFVSGFSVLINESSLT 290 (950)
Q Consensus 213 v~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDiV~l~--~Gd~vPaDgill~g~~l~VDeS~LT 290 (950)
...++...+++..++.+++. .++..++|+|||++++|+++||||||||.|+ +||+|||||+|++|+ |.||||+||
T Consensus 206 ~~~~~~~~~~k~~~~L~~~~--~~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~-~~VdES~LT 282 (1054)
T TIGR01657 206 SISLSVYQIRKQMQRLRDMV--HKPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGS-CIVNESMLT 282 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHhh--cCCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCc-EEEeccccc
Confidence 65555555555444444432 2456899999999999999999999999999 999999999999995 899999999
Q ss_pred CCCCcccccCC-----------------CCeEEeccEEee-------ceEEEEEEEEeeccchhhHhhhhcCCCCCCChh
Q 002230 291 GESEPVNVNAL-----------------NPFLLSGTKVQN-------GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPL 346 (950)
Q Consensus 291 GEs~pv~k~~~-----------------~~~l~sGt~v~~-------G~~~~~V~~~G~~T~~g~i~~~~~~~~~~~tpl 346 (950)
|||.|+.|.+. ++++|+||.|.+ |.+.++|++||.+|..|++.+++..+...++++
T Consensus 283 GES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~ 362 (1054)
T TIGR01657 283 GESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKF 362 (1054)
T ss_pred CCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCch
Confidence 99999999641 347999999985 789999999999999999999998888888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHH
Q 002230 347 QVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAF 426 (950)
Q Consensus 347 q~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~lav~l~l~~ 426 (950)
++...++...+..+ +++.+++++...+.. +. .+...+..++++++++|||+||+++++++++
T Consensus 363 ~~~~~~~~~~l~~~----a~i~~i~~~~~~~~~----~~----------~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~ 424 (1054)
T TIGR01657 363 YKDSFKFILFLAVL----ALIGFIYTIIELIKD----GR----------PLGKIILRSLDIITIVVPPALPAELSIGINN 424 (1054)
T ss_pred HHHHHHHHHHHHHH----HHHHHHHHHHHHHHc----CC----------cHHHHHHHHHHHHHhhcCchHHHHHHHHHHH
Confidence 88877765554333 333333222211111 11 3567788899999999999999999999999
Q ss_pred HHHHHhccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeeeccCCCCCCCCCCCCChHHHHHHHHHHH
Q 002230 427 AMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIF 506 (950)
Q Consensus 427 ~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~ 506 (950)
+++||+++|++||++.++|++|++|++|||||||||+|+|+|.+++..+........ . ..........+..+++
T Consensus 425 ~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~a 498 (1054)
T TIGR01657 425 SLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKI-----V-TEDSSLKPSITHKALA 498 (1054)
T ss_pred HHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCccccccc-----c-ccccccCchHHHHHHH
Confidence 999999999999999999999999999999999999999999999875432110000 0 0000011223445667
Q ss_pred hcCCCceeecCCCceeecCChhhhHHHHHHHHc-CC--C--hHH----------HhhhcceEEEecCCCCCceEEEEEEc
Q 002230 507 NNTGGEVVIGEGNKTEILGTPTETAILEFGLLL-GG--D--FQA----------ERQASKIVKVEPFNSVKKQMGVVIEL 571 (950)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~-g~--~--~~~----------~~~~~~i~~~~pF~s~~k~msvvv~~ 571 (950)
.||+..... + ...|||+|.|+++++... .. + ... ....+++++.+||+|++|||||+++.
T Consensus 499 ~C~~~~~~~---~--~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~ 573 (1054)
T TIGR01657 499 TCHSLTKLE---G--KLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVST 573 (1054)
T ss_pred hCCeeEEEC---C--EEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEE
Confidence 777654332 2 568999999999986311 10 0 000 02467889999999999999999986
Q ss_pred CC-CcEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCC-----CCCCCCC
Q 002230 572 PE-GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF-----SADAPIP 645 (950)
Q Consensus 572 ~~-~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~-----~~~~~~~ 645 (950)
++ +++++++|||||.|+++|+.. ..++++.+.+++|+++|+|||++|||++++.. ..+++..
T Consensus 574 ~~~~~~~~~~KGApE~Il~~c~~~------------~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~ 641 (1054)
T TIGR01657 574 NDERSPDAFVKGAPETIQSLCSPE------------TVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAV 641 (1054)
T ss_pred cCCCeEEEEEECCHHHHHHHcCCc------------CCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHH
Confidence 54 467899999999999999741 12356788899999999999999999987431 1123457
Q ss_pred CCceEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc---------------------
Q 002230 646 TEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG--------------------- 704 (950)
Q Consensus 646 e~~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~--------------------- 704 (950)
|+|++|+|+++|+||+||+++++|++|+++||+++|+||||+.||.++|++|||..++.
T Consensus 642 E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~ 721 (1054)
T TIGR01657 642 ESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFE 721 (1054)
T ss_pred hcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEE
Confidence 89999999999999999999999999999999999999999999999999999975431
Q ss_pred --------------------------------eeeeCccccc---CCHHHHhhhhccccEEeecChhhHHHHHHHHhhhC
Q 002230 705 --------------------------------IAIEGPEFRE---KSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTL 749 (950)
Q Consensus 705 --------------------------------~vi~g~~~~~---~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~ 749 (950)
.+++|+++.. +.++++.+++.++.||||++|+||.++|+.+|+.
T Consensus 722 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~- 800 (1054)
T TIGR01657 722 VIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKL- 800 (1054)
T ss_pred ecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhC-
Confidence 4677777654 4567888899999999999999999999999998
Q ss_pred CCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002230 750 GEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALI 829 (950)
Q Consensus 750 g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~N~~~~~ 829 (950)
|++|+|||||+||+||||+|||||||| . .|+ ..+||+++.+|+|++|+++|+|||+++.|++++++|.+.++++..+
T Consensus 801 g~~V~m~GDG~ND~~ALK~AdVGIam~-~-~da-s~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~ 877 (1054)
T TIGR01657 801 DYTVGMCGDGANDCGALKQADVGISLS-E-AEA-SVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFY 877 (1054)
T ss_pred CCeEEEEeCChHHHHHHHhcCcceeec-c-ccc-eeecccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998 3 354 4899999999999999999999999999999999999999988755
Q ss_pred HHHHHHhhcCCCChhHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHH
Q 002230 830 VNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQT 909 (950)
Q Consensus 830 ~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~p~~~l~~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~l~~ 909 (950)
..++ ++...+||+++|+||+|++++++++++|+.++|.+++|++|| .++++++.++..+++|+++++++.++.++
T Consensus 878 ~~~~--l~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~P---~~~l~~~~~~~si~~q~~i~~~~~~~~~~ 952 (1054)
T TIGR01657 878 SVSI--LYLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKERP---PSNLFSVYILTSVLIQFVLHILSQVYLVF 952 (1054)
T ss_pred HHHH--HHHccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCCC---CccccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4433 233458999999999999999999999999999999999999 47999999999999999999988877765
Q ss_pred hccc--ccc------cCCCCcccccchHHhHHHHHHHHHHHHhcccC
Q 002230 910 RGKA--VFR------LDGPDPDLILNTLIFNTFVFCQVCLSTCIRST 948 (950)
Q Consensus 910 ~~~~--~~~------~~~~~~~~~~~t~~F~~~v~~q~~n~~~~r~~ 948 (950)
.... ++. .++...+...+|++| .++.+|.++.+++|..
T Consensus 953 ~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f-~~~~~~~~~~~~~~~~ 998 (1054)
T TIGR01657 953 ELHAQPWYKPENPVDLEKENFPNLLNTVLF-FVSSFQYLITAIVNSK 998 (1054)
T ss_pred HHhhCCCccCCCCCCcccccCccHHHHHHH-HHHHHHHHHheEEEcC
Confidence 4321 221 111111223479999 6777777777888765
No 14
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.2e-116 Score=989.93 Aligned_cols=804 Identities=31% Similarity=0.433 Sum_probs=683.5
Q ss_pred HhcCHHHHHHHhCCCccCCCChhHHHHHHHHhhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhccc---
Q 002230 117 VHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIAT--- 193 (950)
Q Consensus 117 ~~~~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~il~i~a~~s~~~~~~~--- 193 (950)
+...++++++++.+|..+||+.++ +.+++.+-|+|.+++|+..+-|..+.+|++...-++++++|+++++-+...
T Consensus 40 H~~~~~eL~~r~~t~~~~Glt~~~--A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~ 117 (1019)
T KOG0203|consen 40 HKLSVDELCERYGTSVSQGLTSQE--AAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIGAILCFVAYGIQAST 117 (1019)
T ss_pred ccCCHHHHHHHhcCChhhcccHHH--HHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhccc
Confidence 456799999999999999999987 999999999999999999999999999999999999999999887654321
Q ss_pred -cC-CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh---hhcCCeEEEEeCCeEEEEecCCcCCCcEEEeCCCC
Q 002230 194 -EG-WPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR---EKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGD 268 (950)
Q Consensus 194 -~~-~~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~---~~~~~~v~V~R~g~~~~I~~~dLvvGDiV~l~~Gd 268 (950)
+. .+...|-+. .+..+++++.+..|.|+.+-.+..+ ...+..++|+|||+.+.+...||||||+|.++-||
T Consensus 118 ~~~~~~~nly~gi----iL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelVvGD~v~vk~Gd 193 (1019)
T KOG0203|consen 118 EDDPSDDNLYLGI----VLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELVVGDLVEVKGGD 193 (1019)
T ss_pred CCCCCCcceEEEE----EEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhcccccceeeccCC
Confidence 11 122333332 2333445555666666655444433 34567899999999999999999999999999999
Q ss_pred eecccEEEEeecceEEEcccccCCCCcccccC---------CCCeEEeccEEeeceEEEEEEEEeeccchhhHhhhhcCC
Q 002230 269 QVPADGLFVSGFSVLINESSLTGESEPVNVNA---------LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEG 339 (950)
Q Consensus 269 ~vPaDgill~g~~l~VDeS~LTGEs~pv~k~~---------~~~~l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~~~~ 339 (950)
+||||.+++++..|++|+|+|||||+|.++++ ..++-|.+|.+.+|.++++|.+||.+|.+|+|..+...-
T Consensus 194 rVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~ia~l~~~~ 273 (1019)
T KOG0203|consen 194 RVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVMGRIASLASGL 273 (1019)
T ss_pred cccceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceEEeehhhhhccC
Confidence 99999999999999999999999999998852 245789999999999999999999999999999998888
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHHH
Q 002230 340 GDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLA 419 (950)
Q Consensus 340 ~~~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~la 419 (950)
+..++|++..++++..++..+++++++..|++.++. +. .++.++...+.++|..+|+||+..
T Consensus 274 ~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~--------gy----------~~l~avv~~i~iivAnvPeGL~~t 335 (1019)
T KOG0203|consen 274 EDGKTPIAKEIEHFIHIITGVAIFLGISFFILALIL--------GY----------EWLRAVVFLIGIIVANVPEGLLAT 335 (1019)
T ss_pred CCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhh--------cc----------hhHHHhhhhheeEEecCcCCccce
Confidence 888999999999999999888888877777553321 11 456777778899999999999999
Q ss_pred HHHHHHHHHHHHhccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeeeccCCCCCCCCCCCCChHHHH
Q 002230 420 VTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASK 499 (950)
Q Consensus 420 v~l~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (950)
+|.+++...+||.+++++||++.+.|+||+.++||+|||||||+|+|+|.++|.++.....+.............+....
T Consensus 336 vTv~LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~ 415 (1019)
T KOG0203|consen 336 VTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFI 415 (1019)
T ss_pred ehhhHHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHH
Confidence 99999999999999999999999999999999999999999999999999999988776544322222212222344556
Q ss_pred HHHHHHHhcCCCceeecCCC----ceeecCChhhhHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEcCC--
Q 002230 500 LLLQSIFNNTGGEVVIGEGN----KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPE-- 573 (950)
Q Consensus 500 ~l~~~i~~~~~~~~~~~~~~----~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~pF~s~~k~msvvv~~~~-- 573 (950)
.+....++|+.+....++.+ +....|++.|.||++++...-.+....|+..+.+..+||||.+|+.-.+.+..+
T Consensus 416 ~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~ 495 (1019)
T KOG0203|consen 416 ALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPS 495 (1019)
T ss_pred HHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCC
Confidence 67778888888887766554 345689999999999998776667788899999999999999999877777543
Q ss_pred -CcEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCC--------CCCCCC
Q 002230 574 -GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF--------SADAPI 644 (950)
Q Consensus 574 -~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~--------~~~~~~ 644 (950)
..+.+..|||||.++++|+.+. .+|+..|++++.++.+++...++...|-||++|+++.++++. .+..+.
T Consensus 496 ~~~~~l~mKGape~il~~CSTi~-i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~ 574 (1019)
T KOG0203|consen 496 DPRFLLVMKGAPERILDRCSTIL-INGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNF 574 (1019)
T ss_pred CccceeeecCChHHHHhhcccee-ecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCC
Confidence 4678889999999999999875 578889999999999999999999999999999999887551 123356
Q ss_pred CCCceEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc--------------------
Q 002230 645 PTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG-------------------- 704 (950)
Q Consensus 645 ~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~-------------------- 704 (950)
+..++.|+|++++-||+|..+++|+..|++|||+|+|+|||++.||++||++.||..++.
T Consensus 575 p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~ 654 (1019)
T KOG0203|consen 575 PTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSR 654 (1019)
T ss_pred cchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCcc
Confidence 678999999999999999999999999999999999999999999999999999876432
Q ss_pred ----eeeeCcccccCCHHHHhhhhccc--cEEeecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCC
Q 002230 705 ----IAIEGPEFREKSDEELSKLIPKI--QVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIA 778 (950)
Q Consensus 705 ----~vi~g~~~~~~~~~~~~~~~~~~--~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~ 778 (950)
.|++|.++..++++++++++.+. -||||.||+||+.+|+..|+. |.+|+++|||+||+||||.||||||||++
T Consensus 655 ~a~a~VihG~eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~-GaiVaVTGDGVNDsPALKKADIGVAMGia 733 (1019)
T KOG0203|consen 655 DAKAAVIHGSELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDGVNDSPALKKADIGVAMGIA 733 (1019)
T ss_pred ccceEEEecccccccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhc-CcEEEEeCCCcCCChhhcccccceeeccc
Confidence 68999999999999999998443 399999999999999999999 99999999999999999999999999999
Q ss_pred CcHHHHhcCCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhHHHHHHHHHHHHHH
Q 002230 779 GTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTL 858 (950)
Q Consensus 779 g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~N~~~~~~~~~~~~~~~~~pl~~~qll~~nli~d~l 858 (950)
|+|++|++||++|+||||++|+..+++||.+|+|++|.|.|.++.|+..+...+++.+++.+.|+.++++|++.+..|+.
T Consensus 734 GSDvsKqAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmv 813 (1019)
T KOG0203|consen 734 GSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIV 813 (1019)
T ss_pred cchHHHhhcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCccccccCCCC-CCCCCcCHHHHHHHHHH-HHHHHHHHHHHHHhc--------ccccccCC----C----
Q 002230 859 GALALATEPPNGDLMKRSPVG-RKGNFISNVMWRNILGQ-SLYQFLIIWYLQTRG--------KAVFRLDG----P---- 920 (950)
Q Consensus 859 ~~lal~~e~p~~~l~~~~P~~-~~~~li~~~~~~~i~~~-~~~~~~~~~~l~~~~--------~~~~~~~~----~---- 920 (950)
||++||+|+|+.++|+|+|+. +++.|+|.+....-.+| +++|++..|+-+|.. ..++++.. .
T Consensus 814 PAiSLAYE~aEsDIM~r~PR~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~D 893 (1019)
T KOG0203|consen 814 PAISLAYEKAESDIMLRPPRNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVND 893 (1019)
T ss_pred hhhhHhccCchhhHHhcCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhh
Confidence 999999999999999999996 88999998876554444 577777666655421 11122110 0
Q ss_pred --Cc-------------ccccchHHhHHHHHHHHHHHHhcc
Q 002230 921 --DP-------------DLILNTLIFNTFVFCQVCLSTCIR 946 (950)
Q Consensus 921 --~~-------------~~~~~t~~F~~~v~~q~~n~~~~r 946 (950)
++ +-..+|..|.++|++|+++.+.|.
T Consensus 894 l~DsyGQeWtyeqRk~le~tc~taFfvsIvV~Q~adLii~K 934 (1019)
T KOG0203|consen 894 LTDSYGQEWTYEQRKYLEYTCYTAFFISIVVVQWADLIICK 934 (1019)
T ss_pred hhhhccccccHHHHHHHHHhhhhheeeeehHHhHhhHHhhh
Confidence 00 113689999999999999999875
No 15
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=9.7e-107 Score=1024.22 Aligned_cols=733 Identities=24% Similarity=0.337 Sum_probs=596.4
Q ss_pred cCCCccCCCCCccH---HHHHHHHHhhHHHHHHHHHHHHHHHhhccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHH
Q 002230 150 YGINKFTESPARGF---WVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSL 226 (950)
Q Consensus 150 ~G~N~~~~~~~~~f---~~~~~~~~~~~~~~il~i~a~~s~~~~~~~~~~~~~~~d~~~i~~~illv~~v~~~~~~~~~~ 226 (950)
|.+|.+...++..+ ++.+|+||+++.+++|++++++++++.+++. +..+.++|+++++++++++++.++.
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~-------~~~t~~~pL~~v~~~~~~~~~~ed~ 73 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPT-------YRGTSIVPLAFVLIVTAIKEAIEDI 73 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCC-------CccHhHHhHHHHHHHHHHHHHHHHH
Confidence 56799887776665 5899999999999999999999999877542 2445677889999999999999999
Q ss_pred HHHHhHhhhcCCeEEEEeC-CeEEEEecCCcCCCcEEEeCCCCeecccEEEEeecc----eEEEcccccCCCCcccccCC
Q 002230 227 QFKDLDREKKKITVQVARN-GFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFS----VLINESSLTGESEPVNVNAL 301 (950)
Q Consensus 227 ~~~~l~~~~~~~~v~V~R~-g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g~~----l~VDeS~LTGEs~pv~k~~~ 301 (950)
++++.+++.++..++|+|+ |++++|+++||+|||+|.|++||+|||||+++++++ |.||||+|||||.|+.|...
T Consensus 74 ~r~~~d~~~n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~ 153 (1057)
T TIGR01652 74 RRRRRDKEVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQAL 153 (1057)
T ss_pred HHHHhHHHHhCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecc
Confidence 9999999999999999997 899999999999999999999999999999999765 89999999999999988421
Q ss_pred -----------------------------------------------CCeEEeccEEee-ceEEEEEEEEeeccchhhHh
Q 002230 302 -----------------------------------------------NPFLLSGTKVQN-GSCKMLVTTVGMRTQWGKLM 333 (950)
Q Consensus 302 -----------------------------------------------~~~l~sGt~v~~-G~~~~~V~~~G~~T~~g~i~ 333 (950)
++++++||.+.+ |++.++|++||.+|+++
T Consensus 154 ~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~--- 230 (1057)
T TIGR01652 154 EETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLM--- 230 (1057)
T ss_pred hhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhh---
Confidence 256889999998 99999999999999654
Q ss_pred hhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccC-----CcchHHHHHHHHHHHHHH
Q 002230 334 ATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWS-----GDDALEILEFFAIAVTIV 408 (950)
Q Consensus 334 ~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~il 408 (950)
.+....+.+++++++++|++..++..+.++++++++++. .++........|+.. ......++..|..++.++
T Consensus 231 ~n~~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~---~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~ 307 (1057)
T TIGR01652 231 RNATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGA---GIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILF 307 (1057)
T ss_pred hcCCCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHH---HheecccCCCccceecCcccccchhHHHHHHHHHHHHH
Confidence 455566778899999999998887776666665554432 111110011112211 011123444667788889
Q ss_pred HHHhcCchHHHHHHHHHHHH------HHHhcc----ccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceee
Q 002230 409 VVAVPEGLPLAVTLSLAFAM------KKMMND----KALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIK 478 (950)
Q Consensus 409 vvavP~~L~lav~l~l~~~~------~~~~~~----~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~ 478 (950)
+.++|++|+..++++.+..+ .+|+++ +++||+++++|+||++++||+|||||||+|+|+++++++++..|
T Consensus 308 ~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y 387 (1057)
T TIGR01652 308 SSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSY 387 (1057)
T ss_pred hhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEe
Confidence 99999999999999999988 788875 49999999999999999999999999999999999999988876
Q ss_pred eccCCC-------CCC-----C----CC-----------------CCCChHHHHHHHHHHHhcCCCceeecCC--C-cee
Q 002230 479 EVDNSK-------GTP-----A----FG-----------------SSIPASASKLLLQSIFNNTGGEVVIGEG--N-KTE 522 (950)
Q Consensus 479 ~~~~~~-------~~~-----~----~~-----------------~~~~~~~~~~l~~~i~~~~~~~~~~~~~--~-~~~ 522 (950)
...... ... . .. .....+....+..+++.||++....+++ + ..+
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y 467 (1057)
T TIGR01652 388 GDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITY 467 (1057)
T ss_pred cCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEE
Confidence 522110 000 0 00 0000112233556778888776654222 2 224
Q ss_pred ecCChhhhHHHHHHHHcCCChHH--------------HhhhcceEEEecCCCCCceEEEEEEcCCCcEEEEEcCchHHHH
Q 002230 523 ILGTPTETAILEFGLLLGGDFQA--------------ERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIIL 588 (950)
Q Consensus 523 ~~g~p~e~All~~a~~~g~~~~~--------------~~~~~~i~~~~pF~s~~k~msvvv~~~~~~~~~~~KGa~e~il 588 (950)
..+||+|.||++++...|+.+.. ....+++++++||+|+||||||+++.+++++.+++|||||.|+
T Consensus 468 ~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il 547 (1057)
T TIGR01652 468 QAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIF 547 (1057)
T ss_pred EccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHH
Confidence 47999999999999998876532 2246889999999999999999999888889999999999999
Q ss_pred HhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCC--------------C--------CCCCC
Q 002230 589 AACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSA--------------D--------APIPT 646 (950)
Q Consensus 589 ~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~--------------~--------~~~~e 646 (950)
++|+. .+++.++.+.+.+++|+.+|+||+++|||.++++... + .+.+|
T Consensus 548 ~~~~~----------~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE 617 (1057)
T TIGR01652 548 KRLSS----------GGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIE 617 (1057)
T ss_pred HHhhc----------cchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 99974 1234567788999999999999999999999754100 0 13468
Q ss_pred CceEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc----------------------
Q 002230 647 EGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG---------------------- 704 (950)
Q Consensus 647 ~~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~---------------------- 704 (950)
+|++|+|+++++||+|+|++++|+.|++|||++||+|||+.+||.+||++|||..++.
T Consensus 618 ~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~ 697 (1057)
T TIGR01652 618 KDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKF 697 (1057)
T ss_pred hcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999986542
Q ss_pred -------------------eeeeCcccccCCHH----HHhhhhccc--cEEeecChhhHHHHHHHHhhhCCCEEEEEcCC
Q 002230 705 -------------------IAIEGPEFREKSDE----ELSKLIPKI--QVMARSSPMDKHTLVKHLRTTLGEVVAVTGDG 759 (950)
Q Consensus 705 -------------------~vi~g~~~~~~~~~----~~~~~~~~~--~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG 759 (950)
++++|+++..+.++ ++.+++.++ .||||++|+||.++|+.+|+..|++|+|+|||
T Consensus 698 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG 777 (1057)
T TIGR01652 698 GLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDG 777 (1057)
T ss_pred HHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 36777777654433 344455444 49999999999999999998668999999999
Q ss_pred ccCHHhhhcCCcceeecCCCcH--HHHhcCCEEeccCChhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 002230 760 TNDAPALHEADIGLAMGIAGTE--VAKESADVIILDDNFSTIVTVA-KWGRSVYINIQKFVQFQLTVNVVALIVNFSSAC 836 (950)
Q Consensus 760 ~ND~~al~~AdvGiamg~~g~~--~ak~~aDivl~~~~~~~i~~~i-~~gR~~~~~i~k~i~~~l~~N~~~~~~~~~~~~ 836 (950)
+||+|||++||||| |+.|+| .|+++||+++.+ |..+.+++ .|||++|.|++++++|++++|++.+++.+++.+
T Consensus 778 ~ND~~mlk~AdVGI--gi~g~eg~qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~ 853 (1057)
T TIGR01652 778 ANDVSMIQEADVGV--GISGKEGMQAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSF 853 (1057)
T ss_pred CccHHHHhhcCeee--EecChHHHHHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999 556788 489999999986 99999987 889999999999999999999999999999888
Q ss_pred hcC---CCChhHHHHHHHHHHHHHHHHHHhcc--CCCCccccccCCC----CCCCCCcCHHHHHHHHHHHHHHHHHHHHH
Q 002230 837 LTG---NAPLTAVQLLWVNMIMDTLGALALAT--EPPNGDLMKRSPV----GRKGNFISNVMWRNILGQSLYQFLIIWYL 907 (950)
Q Consensus 837 ~~~---~~pl~~~qll~~nli~d~l~~lal~~--e~p~~~l~~~~P~----~~~~~li~~~~~~~i~~~~~~~~~~~~~l 907 (950)
+++ .+|+++++++|+|+++|++|++++|. +++++++|.++|+ +++.++++...+..|++.++||+++++++
T Consensus 854 ~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~ii~~~ 933 (1057)
T TIGR01652 854 YNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFF 933 (1057)
T ss_pred HHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 654 45889999999999999999999986 6777889999997 66778888887777888999999988776
Q ss_pred HH
Q 002230 908 QT 909 (950)
Q Consensus 908 ~~ 909 (950)
.+
T Consensus 934 ~~ 935 (1057)
T TIGR01652 934 PM 935 (1057)
T ss_pred HH
Confidence 54
No 16
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=5.1e-100 Score=951.70 Aligned_cols=735 Identities=21% Similarity=0.292 Sum_probs=583.4
Q ss_pred hhcCCCccCCCCCccHH----HHHHHHHhhHHHHHHHHHHHHHHHhhccccCCCCCcchhHHHHHHHHHHHHHHHHHHHH
Q 002230 148 EIYGINKFTESPARGFW----VYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYK 223 (950)
Q Consensus 148 ~~~G~N~~~~~~~~~f~----~~~~~~~~~~~~~il~i~a~~s~~~~~~~~~~~~~~~d~~~i~~~illv~~v~~~~~~~ 223 (950)
..|..|.+...++. +| +.+|+||++..++++++++++++++.+++. ...+.++|+++++++++++++.
T Consensus 85 ~~f~~N~i~TsKYt-~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~-------~~~t~~~PL~~vl~v~~ike~~ 156 (1178)
T PLN03190 85 FEFAGNSIRTAKYS-VFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVF-------GRGASILPLAFVLLVTAVKDAY 156 (1178)
T ss_pred ccCCCCeeeccccc-cHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccC-------CcchHHHHHHHHHHHHHHHHHH
Confidence 36899999777653 33 668999999999999999999999887542 2445678999999999999999
Q ss_pred HHHHHHHhHhhhcCCeEEEEeCCeEEEEecCCcCCCcEEEeCCCCeecccEEEEeecc----eEEEcccccCCCCccccc
Q 002230 224 QSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFS----VLINESSLTGESEPVNVN 299 (950)
Q Consensus 224 ~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g~~----l~VDeS~LTGEs~pv~k~ 299 (950)
++.++++.++..|+..++|+|+|.+++++|.||+|||+|.|++||+|||||+++++++ |+||||+|||||.|+.|.
T Consensus 157 Ed~~r~k~d~~~N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~ 236 (1178)
T PLN03190 157 EDWRRHRSDRIENNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRY 236 (1178)
T ss_pred HHHHHHHhHHhhcCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEec
Confidence 9999999999999999999999999999999999999999999999999999999544 899999999999999883
Q ss_pred CC--------------------------------------------CCeEEeccEEee-ceEEEEEEEEeeccchhhHhh
Q 002230 300 AL--------------------------------------------NPFLLSGTKVQN-GSCKMLVTTVGMRTQWGKLMA 334 (950)
Q Consensus 300 ~~--------------------------------------------~~~l~sGt~v~~-G~~~~~V~~~G~~T~~g~i~~ 334 (950)
.. ++++++||.+.+ .++.++|++||.+| |++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dT---K~~~ 313 (1178)
T PLN03190 237 AKQETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRET---KAML 313 (1178)
T ss_pred ccchhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhh---hHhh
Confidence 11 245777777776 47999999999999 5777
Q ss_pred hhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCcc--ccCCc---------c--h----HHH
Q 002230 335 TLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHW--TWSGD---------D--A----LEI 397 (950)
Q Consensus 335 ~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~--~~~~~---------~--~----~~~ 397 (950)
+...+..+.+++++++|++..++..+.+++++++.++... +.... ....| .|... . . ...
T Consensus 314 N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~--~~~~~-~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (1178)
T PLN03190 314 NNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAV--WLRRH-RDELDTIPFYRRKDFSEGGPKNYNYYGWGWEI 390 (1178)
T ss_pred cCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHh--hhccc-cccccccccccccccccccccccccchhhHHH
Confidence 7777778899999999999888777666666555443211 11110 01111 11100 0 0 011
Q ss_pred HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhccc----------cccccchhhhccCCeeEEeeCCccccccCceE
Q 002230 398 LEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDK----------ALVRHLAACETMGSATSICSDKTGTLTTNHMT 467 (950)
Q Consensus 398 ~~~~~~~i~ilvvavP~~L~lav~l~l~~~~~~~~~~~----------ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~ 467 (950)
+..|..++.++...+|++|+..+.++....+..|.+|. +.||+.+.+|+||++++||+|||||||+|+|+
T Consensus 391 ~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~ 470 (1178)
T PLN03190 391 FFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKME 470 (1178)
T ss_pred HHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEE
Confidence 22233445566688999999999999977677776655 78999999999999999999999999999999
Q ss_pred EEEEEEcceeeeccCCC-------------C---CCCCC------------CCCC-h--HHHHHHHHHHHhcCCCceeec
Q 002230 468 VLKACICEEIKEVDNSK-------------G---TPAFG------------SSIP-A--SASKLLLQSIFNNTGGEVVIG 516 (950)
Q Consensus 468 v~~~~~~~~~~~~~~~~-------------~---~~~~~------------~~~~-~--~~~~~l~~~i~~~~~~~~~~~ 516 (950)
++++++++..|+.+... . .+... .... + .....+..++++||++.....
T Consensus 471 fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~ 550 (1178)
T PLN03190 471 FQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVV 550 (1178)
T ss_pred EEEEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeecc
Confidence 99999988776421100 0 00000 0000 0 112335567888888766422
Q ss_pred CC--C----ce-eecCChhhhHHHHHHHHcCC------------ChHHHhhhcceEEEecCCCCCceEEEEEEcCCCcEE
Q 002230 517 EG--N----KT-EILGTPTETAILEFGLLLGG------------DFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFR 577 (950)
Q Consensus 517 ~~--~----~~-~~~g~p~e~All~~a~~~g~------------~~~~~~~~~~i~~~~pF~s~~k~msvvv~~~~~~~~ 577 (950)
++ + .. +.++||+|.||+++|.+.|+ +....+..+++++++||+|+||||||+++.+++.+.
T Consensus 551 ~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~ 630 (1178)
T PLN03190 551 DDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVK 630 (1178)
T ss_pred CCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEE
Confidence 11 1 12 34569999999999999997 334456789999999999999999999998888899
Q ss_pred EEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCC-----------------
Q 002230 578 VHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSA----------------- 640 (950)
Q Consensus 578 ~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~----------------- 640 (950)
+|+|||||.|+++|+... +++.++++.+.+++||++|+|||++|||+++++...
T Consensus 631 l~~KGA~e~il~~~~~~~---------~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~ 701 (1178)
T PLN03190 631 VFVKGADTSMFSVIDRSL---------NMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRA 701 (1178)
T ss_pred EEEecCcHHHHHhhcccc---------cchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhH
Confidence 999999999999997532 233566788999999999999999999999753110
Q ss_pred -----CCCCCCCceEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc-----------
Q 002230 641 -----DAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG----------- 704 (950)
Q Consensus 641 -----~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~----------- 704 (950)
..+.+|+|++++|+++++||+|++++++|+.|+++||++||+|||+..||.+||++|||.+++.
T Consensus 702 ~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~ 781 (1178)
T PLN03190 702 ALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKE 781 (1178)
T ss_pred HHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchh
Confidence 0134689999999999999999999999999999999999999999999999999999975431
Q ss_pred --------------------------------------eeeeCcccccCCH----HHHhhhhcccc--EEeecChhhHHH
Q 002230 705 --------------------------------------IAIEGPEFREKSD----EELSKLIPKIQ--VMARSSPMDKHT 740 (950)
Q Consensus 705 --------------------------------------~vi~g~~~~~~~~----~~~~~~~~~~~--v~ar~~P~~K~~ 740 (950)
++++|.++..+.+ +++.++..++. ||||++|.||++
T Consensus 782 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~ 861 (1178)
T PLN03190 782 SCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAG 861 (1178)
T ss_pred hHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHH
Confidence 4566666665543 34555555544 799999999999
Q ss_pred HHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcH--HHHhcCCEEeccCChhHHHHH-HHHHHHHHHHHHHHH
Q 002230 741 LVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTE--VAKESADVIILDDNFSTIVTV-AKWGRSVYINIQKFV 817 (950)
Q Consensus 741 ~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~--~ak~~aDivl~~~~~~~i~~~-i~~gR~~~~~i~k~i 817 (950)
+|+.+|+..+++|+|+|||+||+|||++||||| |++|+| .|+.+||+.+.+ |..+.++ +.|||+.|.|+.+.+
T Consensus 862 IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGI--GIsG~EG~qA~~aSDfaI~~--Fr~L~rLLlvHGr~~y~R~s~~i 937 (1178)
T PLN03190 862 IVALVKNRTSDMTLAIGDGANDVSMIQMADVGV--GISGQEGRQAVMASDFAMGQ--FRFLVPLLLVHGHWNYQRMGYMI 937 (1178)
T ss_pred HHHHHHhcCCcEEEEECCCcchHHHHHhcCeee--eecCchhHHHHHhhccchhh--hHHHHHHHHHhCHHHHHHHHHHH
Confidence 999999874589999999999999999999999 778999 589999999987 9999998 479999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCC---ChhHHHHHHHHHHHHHHHHHHhcc-CC-CCccccccCCC----CCCCCCcCHH
Q 002230 818 QFQLTVNVVALIVNFSSACLTGNA---PLTAVQLLWVNMIMDTLGALALAT-EP-PNGDLMKRSPV----GRKGNFISNV 888 (950)
Q Consensus 818 ~~~l~~N~~~~~~~~~~~~~~~~~---pl~~~qll~~nli~d~l~~lal~~-e~-p~~~l~~~~P~----~~~~~li~~~ 888 (950)
+|.+++|++..++.|++.++++++ .++.+.+.++|++++.+|.+++|. |. -+++.+.+.|. +++...++..
T Consensus 938 ~y~fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~ 1017 (1178)
T PLN03190 938 LYNFYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSK 1017 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHH
Confidence 999999999999999998887765 468999999999999999999975 32 23344445553 4556677877
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 002230 889 MWRNILGQSLYQFLIIWYLQT 909 (950)
Q Consensus 889 ~~~~i~~~~~~~~~~~~~l~~ 909 (950)
.+..|++.++||++++|++.+
T Consensus 1018 ~F~~w~~~~i~qs~iiff~~~ 1038 (1178)
T PLN03190 1018 LFWLTMIDTLWQSAVVFFVPL 1038 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 766778899999998887654
No 17
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=2.1e-92 Score=833.56 Aligned_cols=547 Identities=24% Similarity=0.357 Sum_probs=442.6
Q ss_pred HHHhhHHHHHHHHHHHHHHHhhcccc--CC-CCCcchhHHHHHHHHHHHHHHHHHHHHHH----HHHHHhHhhhcCCeEE
Q 002230 169 EALHDMTLMILAVCALVSLVVGIATE--GW-PKGAHDGLGIVMSILLVVFVTATSDYKQS----LQFKDLDREKKKITVQ 241 (950)
Q Consensus 169 ~~~~~~~~~il~i~a~~s~~~~~~~~--~~-~~~~~d~~~i~~~illv~~v~~~~~~~~~----~~~~~l~~~~~~~~v~ 241 (950)
.++++|..++++++++++++++.+.+ +. +..+++++.|++.+++.+++..+.+.+++ ++.+.|.+...+.+++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 46789999999999999999887533 11 11235677777777777777776644434 3444455433333565
Q ss_pred -EEeCCeEEEEecCCcCCCcEEEeCCCCeecccEEEEeecceEEEcccccCCCCcccccCC---CCeEEeccEEeeceEE
Q 002230 242 -VARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNAL---NPFLLSGTKVQNGSCK 317 (950)
Q Consensus 242 -V~R~g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g~~l~VDeS~LTGEs~pv~k~~~---~~~l~sGt~v~~G~~~ 317 (950)
|.|||++++|++++|+|||+|.|++||+|||||++++|+. .||||+|||||.|+.|..+ ++ +|+||.|.+|+++
T Consensus 108 ~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~~-~VDESaLTGES~PV~K~~g~d~~~-V~aGT~v~~G~~~ 185 (673)
T PRK14010 108 RIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGLA-TVDESAITGESAPVIKESGGDFDN-VIGGTSVASDWLE 185 (673)
T ss_pred EEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcce-EEecchhcCCCCceeccCCCccCe-eecCceeecceEE
Confidence 6799999999999999999999999999999999999975 9999999999999999876 65 9999999999999
Q ss_pred EEEEEEeeccchhhHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHH
Q 002230 318 MLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEI 397 (950)
Q Consensus 318 ~~V~~~G~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (950)
++|+++|.+|++|||.+++++++.++||+|..+..+...+. +.++++++++..+.. +. .+
T Consensus 186 i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~-----ii~l~~~~~~~~~~~----------~~-----~~ 245 (673)
T PRK14010 186 VEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLT-----IIFLVVILTMYPLAK----------FL-----NF 245 (673)
T ss_pred EEEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHh-----HHHHHHHHHHHHHHh----------hc-----cH
Confidence 99999999999999999999999889999977665543322 222222222111000 00 12
Q ss_pred HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEccee
Q 002230 398 LEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEI 477 (950)
Q Consensus 398 ~~~~~~~i~ilvvavP~~L~lav~l~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~ 477 (950)
...+..++++.+.+|||+||.+++++++.++++|.++|+++|+++++|+||++|+||||||||||+|++.++++...+.
T Consensus 246 ~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~- 324 (673)
T PRK14010 246 NLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKS- 324 (673)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCCC-
Confidence 2345677888888999999999999999999999999999999999999999999999999999998777766542111
Q ss_pred eeccCCCCCCCCCCCCChHHHHHHHHHHHhcCCCceeecCCCceeecCChhhhHHHHHHHHcCCChHHHhhhcceEEEec
Q 002230 478 KEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEP 557 (950)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~p 557 (950)
....+++ .....|+.. +.||+++|+++++.+.+.+.... ..+.+|
T Consensus 325 -----------------~~~~~ll-~~a~~~~~~------------s~~P~~~AIv~~a~~~~~~~~~~-----~~~~~p 369 (673)
T PRK14010 325 -----------------SSFERLV-KAAYESSIA------------DDTPEGRSIVKLAYKQHIDLPQE-----VGEYIP 369 (673)
T ss_pred -----------------ccHHHHH-HHHHHhcCC------------CCChHHHHHHHHHHHcCCCchhh-----hcceec
Confidence 0112222 222233221 45999999999998776653221 123589
Q ss_pred CCCCCceEEEEEEcCCCcEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCC
Q 002230 558 FNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNE 637 (950)
Q Consensus 558 F~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~ 637 (950)
|++++|+|++.++ +. .+.||+++.+++.|+. +|...+. .+++..++++++|+|+++++
T Consensus 370 F~~~~k~~gv~~~---g~--~i~kGa~~~il~~~~~----~g~~~~~------~~~~~~~~~a~~G~~~l~v~------- 427 (673)
T PRK14010 370 FTAETRMSGVKFT---TR--EVYKGAPNSMVKRVKE----AGGHIPV------DLDALVKGVSKKGGTPLVVL------- 427 (673)
T ss_pred cccccceeEEEEC---CE--EEEECCHHHHHHHhhh----cCCCCch------HHHHHHHHHHhCCCeEEEEE-------
Confidence 9999999998753 22 4569999999999974 2222221 25566778999999999876
Q ss_pred CCCCCCCCCCceEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCH
Q 002230 638 FSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSD 717 (950)
Q Consensus 638 ~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~ 717 (950)
.|++++|+++++||+|||++++|++||++||+++|+||||+.||.++|+++||..
T Consensus 428 ---------~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~---------------- 482 (673)
T PRK14010 428 ---------EDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR---------------- 482 (673)
T ss_pred ---------ECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCce----------------
Confidence 3678999999999999999999999999999999999999999999999999974
Q ss_pred HHHhhhhccccEEeecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChh
Q 002230 718 EELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFS 797 (950)
Q Consensus 718 ~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~ 797 (950)
++||++|+||.++|+.+|++ |++|+|||||+||+|||++|||||||| +|+|+||++||+|++||||.
T Consensus 483 -----------v~A~~~PedK~~iV~~lQ~~-G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~ls 549 (673)
T PRK14010 483 -----------FVAECKPEDKINVIREEQAK-GHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAANLIDLDSNPT 549 (673)
T ss_pred -----------EEcCCCHHHHHHHHHHHHhC-CCEEEEECCChhhHHHHHhCCEEEEeC-CCCHHHHHhCCEEEcCCCHH
Confidence 99999999999999999999 999999999999999999999999999 99999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002230 798 TIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFS 833 (950)
Q Consensus 798 ~i~~~i~~gR~~~~~i~k~i~~~l~~N~~~~~~~~~ 833 (950)
+|++++++||++|.|+++++.|.++.|+..++..+.
T Consensus 550 ~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~ 585 (673)
T PRK14010 550 KLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILP 585 (673)
T ss_pred HHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHH
Confidence 999999999999999999999999999987665544
No 18
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=4.9e-91 Score=822.65 Aligned_cols=543 Identities=25% Similarity=0.353 Sum_probs=442.9
Q ss_pred HHHhhHHHHHHHHHHHHHHHhhcccc---CC---CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcCCeEEE
Q 002230 169 EALHDMTLMILAVCALVSLVVGIATE---GW---PKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQV 242 (950)
Q Consensus 169 ~~~~~~~~~il~i~a~~s~~~~~~~~---~~---~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V 242 (950)
.+|++++.+++++++++++++++... +. ..+|..++.+++.+++..++.+..+++.+++.+.|.+..++..++|
T Consensus 29 ~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~v 108 (679)
T PRK01122 29 VQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARK 108 (679)
T ss_pred HHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 57889999999999999999886532 11 1223333333333444444555666666677777776555457999
Q ss_pred EeCCe-EEEEecCCcCCCcEEEeCCCCeecccEEEEeecceEEEcccccCCCCcccccCCC--CeEEeccEEeeceEEEE
Q 002230 243 ARNGF-RRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALN--PFLLSGTKVQNGSCKML 319 (950)
Q Consensus 243 ~R~g~-~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g~~l~VDeS~LTGEs~pv~k~~~~--~~l~sGt~v~~G~~~~~ 319 (950)
+|||+ +++|++++|+|||+|.+++||+|||||++++|. ..||||+|||||.|+.|..++ +.+|+||.|.+|+++++
T Consensus 109 ir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~-a~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i~ 187 (679)
T PRK01122 109 LREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGV-ASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVIR 187 (679)
T ss_pred EECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEcc-EEEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEEE
Confidence 99988 899999999999999999999999999999997 599999999999999998654 34999999999999999
Q ss_pred EEEEeeccchhhHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHH
Q 002230 320 VTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILE 399 (950)
Q Consensus 320 V~~~G~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (950)
|+++|.+|.+|+|.+++++++.++||+|..++.+...+..+.+++++..+.+ .++. + . . .
T Consensus 188 Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~---~~~~-----g-------~---~--~ 247 (679)
T PRK01122 188 ITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPF---AAYS-----G-------G---A--L 247 (679)
T ss_pred EEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHH---HHHh-----C-------c---h--H
Confidence 9999999999999999999988899999888877655543332222111111 1110 1 0 1 1
Q ss_pred HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeee
Q 002230 400 FFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKE 479 (950)
Q Consensus 400 ~~~~~i~ilvvavP~~L~lav~l~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~ 479 (950)
.+..++++++++|||+|+.+.++....++++|+++|+++|+++++|+||++|+||||||||||+|+|++++++..+..
T Consensus 248 ~l~~~iallV~aiP~alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~-- 325 (679)
T PRK01122 248 SITVLVALLVCLIPTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGV-- 325 (679)
T ss_pred HHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCC--
Confidence 567789999999999999999999999999999999999999999999999999999999999999999987643221
Q ss_pred ccCCCCCCCCCCCCChHHHHHHHHHHHhcCCCceeecCCCceeecCChhhhHHHHHHHH-cCCChHHHhhhcceEEEecC
Q 002230 480 VDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLL-LGGDFQAERQASKIVKVEPF 558 (950)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~-~g~~~~~~~~~~~i~~~~pF 558 (950)
++ +.+....+.++.+ +.||..+|+++++.+ .+.+.. +..++..+.+||
T Consensus 326 --------------~~---~~ll~~a~~~s~~------------s~hP~~~AIv~~a~~~~~~~~~--~~~~~~~~~~pF 374 (679)
T PRK01122 326 --------------TE---EELADAAQLSSLA------------DETPEGRSIVVLAKQRFNLRER--DLQSLHATFVPF 374 (679)
T ss_pred --------------CH---HHHHHHHHHhcCC------------CCCchHHHHHHHHHhhcCCCch--hhccccceeEee
Confidence 11 1123333333321 358999999999876 343321 222456788999
Q ss_pred CCCCceEEEEEEcCCCcEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCC
Q 002230 559 NSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF 638 (950)
Q Consensus 559 ~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~ 638 (950)
++.+|+|++.+. + +.+.||++|.+++.|.. +|... .+++++.+++++++|+|++++|+
T Consensus 375 ~s~~~~~gv~~~---g--~~~~kGa~e~il~~~~~----~g~~~------~~~~~~~~~~~a~~G~~~l~va~------- 432 (679)
T PRK01122 375 SAQTRMSGVDLD---G--REIRKGAVDAIRRYVES----NGGHF------PAELDAAVDEVARKGGTPLVVAE------- 432 (679)
T ss_pred cCcCceEEEEEC---C--EEEEECCHHHHHHHHHh----cCCcC------hHHHHHHHHHHHhCCCcEEEEEE-------
Confidence 999998888542 2 57899999999999963 22221 14567788899999999999993
Q ss_pred CCCCCCCCCceEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHH
Q 002230 639 SADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDE 718 (950)
Q Consensus 639 ~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~ 718 (950)
|++++|+++++||+|||++++|++||++||+++|+||||+.||.+||+++||.+
T Consensus 433 ---------~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~----------------- 486 (679)
T PRK01122 433 ---------DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD----------------- 486 (679)
T ss_pred ---------CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE-----------------
Confidence 578999999999999999999999999999999999999999999999999964
Q ss_pred HHhhhhccccEEeecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhH
Q 002230 719 ELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFST 798 (950)
Q Consensus 719 ~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~ 798 (950)
++||++|+||.++|+.+|++ |++|+|||||+||+|||++|||||||| +|+++||++||+|++||||.+
T Consensus 487 ----------v~A~~~PedK~~iV~~lQ~~-G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~~s~ 554 (679)
T PRK01122 487 ----------FLAEATPEDKLALIRQEQAE-GRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAGNMVDLDSNPTK 554 (679)
T ss_pred ----------EEccCCHHHHHHHHHHHHHc-CCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHH
Confidence 99999999999999999999 999999999999999999999999999 999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002230 799 IVTVAKWGRSVYINIQKFVQFQLTVNVV 826 (950)
Q Consensus 799 i~~~i~~gR~~~~~i~k~i~~~l~~N~~ 826 (950)
|+++++|||++.-.--..-.|++. |-+
T Consensus 555 Iv~av~~GR~~~~tr~~~~~f~~~-n~~ 581 (679)
T PRK01122 555 LIEVVEIGKQLLMTRGALTTFSIA-NDV 581 (679)
T ss_pred HHHHHHHHHHHHhhhHhhhhhhHH-HHH
Confidence 999999999999777777888876 554
No 19
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-88 Score=776.58 Aligned_cols=754 Identities=23% Similarity=0.333 Sum_probs=572.8
Q ss_pred cCCCChhHHHHHHHHhhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhccccCCCCCcchhHHHHHHHHH
Q 002230 133 TDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILL 212 (950)
Q Consensus 133 ~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~il~i~a~~s~~~~~~~~~~~~~~~d~~~i~~~ill 212 (950)
..||+..+ +.+|+..||.|.+.. +.++.+.++.++.-+|+..+. ++|+++|...+ .+|.+..|++.-+.
T Consensus 158 ~~gL~~~~--~~~r~~iyG~N~i~l-~ik~i~~iLv~EvL~PfYlFQ----~fSv~lW~~d~----Y~~YA~cI~iisv~ 226 (1140)
T KOG0208|consen 158 SNGLERQE--IIDRRIIYGRNVISL-PIKSISQILVKEVLNPFYLFQ----AFSVALWLADS----YYYYAFCIVIISVY 226 (1140)
T ss_pred cCCccHHH--HHhHHhhcCCceeee-ecccHHHHHHHhccchHHHHH----hHHhhhhhccc----chhhhhHHHHHHHH
Confidence 57998876 899999999999965 468899999988888876554 45555665432 34445554443333
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhhcCCeEEEEeCCeEEEEecCCcCCCcEEEeCC-CCeecccEEEEeecceEEEcccccC
Q 002230 213 VVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCM-GDQVPADGLFVSGFSVLINESSLTG 291 (950)
Q Consensus 213 v~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDiV~l~~-Gd~vPaDgill~g~~l~VDeS~LTG 291 (950)
-++++....-.++++.+++-+ ....|+|+|||.+++|.++|||||||+.+.+ |-..|||++|++|+ |.||||+|||
T Consensus 227 Si~~sv~e~r~qs~rlr~mv~--~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~-civNEsmLTG 303 (1140)
T KOG0208|consen 227 SIVLSVYETRKQSIRLRSMVK--FTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGD-CIVNESMLTG 303 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHhc--CCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeCc-EEeecccccC
Confidence 334444444444444444433 2358999999999999999999999999998 89999999999996 8999999999
Q ss_pred CCCcccccC------------------CCCeEEeccEEee------ceEEEEEEEEeeccchhhHhhhhcCCCCCCChhH
Q 002230 292 ESEPVNVNA------------------LNPFLLSGTKVQN------GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQ 347 (950)
Q Consensus 292 Es~pv~k~~------------------~~~~l~sGt~v~~------G~~~~~V~~~G~~T~~g~i~~~~~~~~~~~tplq 347 (950)
||.|+.|.+ ..+++|+||++.+ +.+.+.|++||.+|..|++.+++..++.. .
T Consensus 304 ESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP~----~ 379 (1140)
T KOG0208|consen 304 ESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKPV----N 379 (1140)
T ss_pred CcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCCc----c
Confidence 999999952 2357999999974 77999999999999999999999887543 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHH
Q 002230 348 VKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFA 427 (950)
Q Consensus 348 ~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~lav~l~l~~~ 427 (950)
.++-+-+..+.....++|++.|+...+.+... |. .+-..+..++.++.+.+|++||.+.++...++
T Consensus 380 fkfyrds~~fi~~l~~ia~~gfiy~~i~l~~~----g~----------~~~~iiirsLDliTi~VPPALPAaltvG~~~a 445 (1140)
T KOG0208|consen 380 FKFYRDSFKFILFLVIIALIGFIYTAIVLNLL----GV----------PLKTIIIRSLDLITIVVPPALPAALTVGIIYA 445 (1140)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHc----CC----------CHHHHhhhhhcEEEEecCCCchhhhhHHHHHH
Confidence 33433333444444445555554433322211 11 34466788899999999999999999999999
Q ss_pred HHHHhccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeee-------ccCCCCC--CCCCCCCChHHH
Q 002230 428 MKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKE-------VDNSKGT--PAFGSSIPASAS 498 (950)
Q Consensus 428 ~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~-------~~~~~~~--~~~~~~~~~~~~ 498 (950)
.+||.|+||.|-+++.+...|+++++|||||||||++.+.+..+........ ....... .....+......
T Consensus 446 ~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 525 (1140)
T KOG0208|consen 446 QSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPM 525 (1140)
T ss_pred HHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCch
Confidence 9999999999999999999999999999999999999999988776332100 0000000 000000001112
Q ss_pred HHHHHHHHhcCCCceeecCCCceeecCChhhhHHHHHHHHc-------CCCh------------------HHHh----hh
Q 002230 499 KLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLL-------GGDF------------------QAER----QA 549 (950)
Q Consensus 499 ~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~-------g~~~------------------~~~~----~~ 549 (950)
..+..+++.||+-....+ ...|+|.|.-+.+...-- +... .... ..
T Consensus 526 ~~~~~a~atCHSL~~v~g-----~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~ 600 (1140)
T KOG0208|consen 526 GNLVAAMATCHSLTLVDG-----TLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGE 600 (1140)
T ss_pred HHHHHHHhhhceeEEeCC-----eeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcc
Confidence 346677888875433322 456777776665533100 0000 0000 14
Q ss_pred cceEEEecCCCCCceEEEEEEcC-CCcEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeE
Q 002230 550 SKIVKVEPFNSVKKQMGVVIELP-EGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLC 628 (950)
Q Consensus 550 ~~i~~~~pF~s~~k~msvvv~~~-~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~ 628 (950)
+.+++.+||+|.-+||||++..+ +....+|+|||||.|.+.|+. +.+| ..+++.++.|+.+|+|++|
T Consensus 601 ~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p------~tvP------~dy~evl~~Yt~~GfRVIA 668 (1140)
T KOG0208|consen 601 ISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKP------ETVP------ADYQEVLKEYTHQGFRVIA 668 (1140)
T ss_pred eEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCc------ccCC------ccHHHHHHHHHhCCeEEEE
Confidence 77999999999999999999976 467899999999999999974 2223 4588999999999999999
Q ss_pred EEEEEcCCCC-----CCCCCCCCCceEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC
Q 002230 629 LACMEIGNEF-----SADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN 703 (950)
Q Consensus 629 ~A~~~~~~~~-----~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~ 703 (950)
+|+|.++... ...++..|.|++|+|++.|++++|++++.+|++|++|.||++|+||||..||..+||+||++.+.
T Consensus 669 lA~K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~ 748 (1140)
T KOG0208|consen 669 LASKELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQ 748 (1140)
T ss_pred EecCccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCC
Confidence 9999998761 23457789999999999999999999999999999999999999999999999999999998653
Q ss_pred c-------------------------------------------------------eeeeCcccccC---CHHHHhhhhc
Q 002230 704 G-------------------------------------------------------IAIEGPEFREK---SDEELSKLIP 725 (950)
Q Consensus 704 ~-------------------------------------------------------~vi~g~~~~~~---~~~~~~~~~~ 725 (950)
. .+++|+.|+.+ ..+.+.+++.
T Consensus 749 ~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~ 828 (1140)
T KOG0208|consen 749 VKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILL 828 (1140)
T ss_pred CeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHh
Confidence 2 45566665543 3566777888
Q ss_pred cccEEeecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHH
Q 002230 726 KIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 805 (950)
Q Consensus 726 ~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~ 805 (950)
+..||||++|.||.++|+.||+. |..|+|+|||+||+.|||+||+||+++. ..|.-||.+.-.-.+.+++.++|++
T Consensus 829 ~~~VfARMsP~qK~~Lie~lQkl-~y~VgfCGDGANDCgALKaAdvGISLSe---aEASvAApFTSk~~~I~cVp~vIrE 904 (1140)
T KOG0208|consen 829 KGTVFARMSPDQKAELIEALQKL-GYKVGFCGDGANDCGALKAADVGISLSE---AEASVAAPFTSKTPSISCVPDVIRE 904 (1140)
T ss_pred cCeEEeecCchhHHHHHHHHHhc-CcEEEecCCCcchhhhhhhcccCcchhh---hhHhhcCccccCCCchhhHhHHHhh
Confidence 99999999999999999999988 9999999999999999999999999872 2356778999888889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCCCc
Q 002230 806 GRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFI 885 (950)
Q Consensus 806 gR~~~~~i~k~i~~~l~~N~~~~~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~p~~~l~~~~P~~~~~~li 885 (950)
||+....--..++|...|.++..+..+ .++....-++..|.|+++++..++-+++++..+|.++|-..|| +..|+
T Consensus 905 GRaALVTSf~~FkYMalYs~iqFisv~--~LY~~~~nl~D~Qfl~iDLlii~pia~~m~~~~a~~~L~~~rP---~~~L~ 979 (1140)
T KOG0208|consen 905 GRAALVTSFACFKYMALYSAIQFISVV--FLYLINSNLGDLQFLFIDLLIITPIAVMMSRFDASDKLFPKRP---PTNLL 979 (1140)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHhhh--eeeeecccccchhhhhhHHHHHHHHHHHHccCcHHHHhcCCCC---Ccccc
Confidence 999999998899998877766443332 2344567899999999999999999999999999999988877 57899
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhcc--cccccCCC----CcccccchHHhHHHHHHHHHHHHh
Q 002230 886 SNVMWRNILGQSLYQFLIIWYLQTRGK--AVFRLDGP----DPDLILNTLIFNTFVFCQVCLSTC 944 (950)
Q Consensus 886 ~~~~~~~i~~~~~~~~~~~~~l~~~~~--~~~~~~~~----~~~~~~~t~~F~~~v~~q~~n~~~ 944 (950)
++......++|.++..++.+++++.+. +|+.-... +-.....|.+|..--|.-+|+.+-
T Consensus 980 s~~~~~~l~~q~vli~l~q~i~~l~~~~qpw~~pp~~~~~~nt~s~~~T~lF~vS~fqYi~~a~v 1044 (1140)
T KOG0208|consen 980 SKKILVPLLLQIVLICLVQWILTLIVEPQPWYEPPNPQVDDNTQSSDNTSLFFVSSFQYIFIALV 1044 (1140)
T ss_pred ccchhhhhHHHHHHHHHHHHhhheeeccccceecCCCCcCcccccceeeEeeehhHHHHHHhhee
Confidence 999999999998888888777766543 34432111 122345677777777777777654
No 20
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=3.3e-87 Score=788.04 Aligned_cols=545 Identities=26% Similarity=0.369 Sum_probs=449.0
Q ss_pred HHHhhHHHHHHHHHHHHHHHhhccc--cC---CCCCcchhH---HHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcCCeE
Q 002230 169 EALHDMTLMILAVCALVSLVVGIAT--EG---WPKGAHDGL---GIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240 (950)
Q Consensus 169 ~~~~~~~~~il~i~a~~s~~~~~~~--~~---~~~~~~d~~---~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v 240 (950)
.||+|+.++++++++++++++++.. .+ ...+||++. .+++.+++..++.+..+++.++++++|.+..++..+
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 4789999999999999999987642 11 113588753 334445566667778888888888888876555568
Q ss_pred EEEe-CCeEEEEecCCcCCCcEEEeCCCCeecccEEEEeecceEEEcccccCCCCcccccCCCC--eEEeccEEeeceEE
Q 002230 241 QVAR-NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNP--FLLSGTKVQNGSCK 317 (950)
Q Consensus 241 ~V~R-~g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g~~l~VDeS~LTGEs~pv~k~~~~~--~l~sGt~v~~G~~~ 317 (950)
+|+| ||++++|++++|+|||+|.+++||+|||||++++|+ +.||||+|||||.|+.|..++. .+|+||.|.+|+++
T Consensus 108 ~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~-~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~~ 186 (675)
T TIGR01497 108 KLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGV-ASVDESAITGESAPVIKESGGDFASVTGGTRILSDWLV 186 (675)
T ss_pred EEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcc-EEEEcccccCCCCceeecCCCCcceeecCcEEEeeEEE
Confidence 8886 899999999999999999999999999999999996 6999999999999999987753 49999999999999
Q ss_pred EEEEEEeeccchhhHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHH
Q 002230 318 MLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEI 397 (950)
Q Consensus 318 ~~V~~~G~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (950)
++|+++|.+|++|+|.+++++++.++||+|..++.+..++..+.++ +++.+|.... |... .
T Consensus 187 i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li---~~~~~~~~~~------------~~~~---~- 247 (675)
T TIGR01497 187 VECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLL---VTATLWPFAA------------YGGN---A- 247 (675)
T ss_pred EEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHH---HHHHHHHHHH------------hcCh---h-
Confidence 9999999999999999999999888999998888776554332221 1122221110 0010 1
Q ss_pred HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEccee
Q 002230 398 LEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEI 477 (950)
Q Consensus 398 ~~~~~~~i~ilvvavP~~L~lav~l~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~ 477 (950)
..+..++++++++|||+|+...+.....++++|+++|+++|+++++|+||++|+||||||||||+|+|++++++..+..
T Consensus 248 -~~~~~lvallV~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~ 326 (675)
T TIGR01497 248 -ISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQGV 326 (675)
T ss_pred -HHHHHHHHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCCC
Confidence 1356678899999999888888777778999999999999999999999999999999999999999999988753211
Q ss_pred eeccCCCCCCCCCCCCChHHHHHHHHHHHhcCCCceeecCCCceeecCChhhhHHHHHHHHcCCChHHHhhhcceEEEec
Q 002230 478 KEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEP 557 (950)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~p 557 (950)
+. .+ +...++.++. .+.||.++|+++++.+.+.+... ..++..+..|
T Consensus 327 ----------------~~--~~-ll~~aa~~~~------------~s~hP~a~Aiv~~a~~~~~~~~~--~~~~~~~~~p 373 (675)
T TIGR01497 327 ----------------DE--KT-LADAAQLASL------------ADDTPEGKSIVILAKQLGIREDD--VQSLHATFVE 373 (675)
T ss_pred ----------------cH--HH-HHHHHHHhcC------------CCCCcHHHHHHHHHHHcCCCccc--cccccceEEE
Confidence 11 12 2233333322 14689999999999887654322 1234567899
Q ss_pred CCCCCceEEEEEEcCCCcEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCC
Q 002230 558 FNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNE 637 (950)
Q Consensus 558 F~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~ 637 (950)
|++.+|+|++.+. ++ +.++||++|.+++.|.. +|...+ .++++.+++++++|+|++++|+
T Consensus 374 f~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~----~g~~~~------~~~~~~~~~~a~~G~r~l~va~------ 433 (675)
T TIGR01497 374 FTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEA----NGGHIP------TDLDQAVDQVARQGGTPLVVCE------ 433 (675)
T ss_pred EcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHh----cCCCCc------HHHHHHHHHHHhCCCeEEEEEE------
Confidence 9999888877543 22 46899999999988852 222221 3467778899999999999994
Q ss_pred CCCCCCCCCCceEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCH
Q 002230 638 FSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSD 717 (950)
Q Consensus 638 ~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~ 717 (950)
+.+++|+++++||+|||++++|++|+++|++++|+|||+..+|.++|+++||..
T Consensus 434 ----------~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~---------------- 487 (675)
T TIGR01497 434 ----------DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD---------------- 487 (675)
T ss_pred ----------CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE----------------
Confidence 358999999999999999999999999999999999999999999999999964
Q ss_pred HHHhhhhccccEEeecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChh
Q 002230 718 EELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFS 797 (950)
Q Consensus 718 ~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~ 797 (950)
+++|++|+||..+|+.+|++ |+.|+|+|||.||+|||++|||||||| +|+++++++||++++||||.
T Consensus 488 -----------v~a~~~PedK~~~v~~lq~~-g~~VamvGDG~NDapAL~~AdvGiAm~-~gt~~akeaadivLldd~~s 554 (675)
T TIGR01497 488 -----------FIAEATPEDKIALIRQEQAE-GKLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSDPT 554 (675)
T ss_pred -----------EEcCCCHHHHHHHHHHHHHc-CCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEECCCCHH
Confidence 89999999999999999998 999999999999999999999999999 99999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002230 798 TIVTVAKWGRSVYINIQKFVQFQLTVNVV 826 (950)
Q Consensus 798 ~i~~~i~~gR~~~~~i~k~i~~~l~~N~~ 826 (950)
+|+++++|||+++.+......|++.-+++
T Consensus 555 ~Iv~av~~GR~~~~t~~~~~t~~~~~~~~ 583 (675)
T TIGR01497 555 KLIEVVHIGKQLLITRGALTTFSIANDVA 583 (675)
T ss_pred HHHHHHHHHHHHHHHHHHHheeeecccHH
Confidence 99999999999999999999999877765
No 21
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.5e-88 Score=798.54 Aligned_cols=653 Identities=26% Similarity=0.331 Sum_probs=498.3
Q ss_pred hhhccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCC-ccccccccccCCcccChhhhhhhhccCCh---HHHH
Q 002230 41 FTANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSS-EYTVPEEVAASGFQICPDELGSIVEGHDI---KKLK 116 (950)
Q Consensus 41 ~~~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~l~ 116 (950)
.|+.|..+.| .+++.+++++++||+.++++.+.|++. ... ...+...++..||..............+. +.+.
T Consensus 12 ~Ca~C~~~ie-~l~~~~gV~~~~vn~~t~~~~v~~~~~--~~~~~~~~~~~v~~~gy~~~~~~~~~~~~~~~~~~~~~~~ 88 (713)
T COG2217 12 TCAACASRIE-ALNKLPGVEEARVNLATERATVVYDPE--EVDLPADIVAAVEKAGYSARLTAALADPAEAEARLLRELL 88 (713)
T ss_pred CcHHHHHHHH-HHhcCCCeeEEEeecccceEEEEeccc--ccccHHHHHHHHHhcCccccccccccchhhhhhhhhhhHH
Confidence 3567888999 999999999999999999999999865 233 56788888999998765111111111110 1122
Q ss_pred HhcCHHHHHH----HhCCCccCCCChhHHHHHHHHhhcCCCccCCCCCccHHHHHHHHHhhHHHHH--HHH-HHHHHHHh
Q 002230 117 VHGGVEGIAE----KLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMI--LAV-CALVSLVV 189 (950)
Q Consensus 117 ~~~~v~~l~~----~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~i--l~i-~a~~s~~~ 189 (950)
+...+.++.. .+......|. . ........-.-....-.+.+|++.+|+.++.....| |+. +++.++++
T Consensus 89 ~~~~i~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~l~~~v~~~~g~~f~~~a~~~l~~~~~~md~Lv~la~~~A~~~ 163 (713)
T COG2217 89 RRLIIAGLLTLPLLLLSLGLLLGA--F---LLPWVSFLLATPVLFYGGWPFYRGAWRALRRGRLNMDTLVALATIGAYAY 163 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcch--h---hHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHH
Confidence 2222333222 1111111111 0 111100000000001147788899999998765443 222 22233333
Q ss_pred hccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh------hhcCCeEEEEe-CCeEEEEecCCcCCCcEE
Q 002230 190 GIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR------EKKKITVQVAR-NGFRRKISIYDLLPGDIV 262 (950)
Q Consensus 190 ~~~~~~~~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~------~~~~~~v~V~R-~g~~~~I~~~dLvvGDiV 262 (950)
+.+.--.+ .||+..++++.++++ ++|.+++...+..+ ...+..+++++ ||+.++|+++||+|||+|
T Consensus 164 s~~~~~~~-~yf~~aa~ii~l~~~------G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v 236 (713)
T COG2217 164 SLYATLFP-VYFEEAAMLIFLFLL------GRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIV 236 (713)
T ss_pred HHHHHhhh-hHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEE
Confidence 33211111 566766665554443 78888777666433 34567887776 566899999999999999
Q ss_pred EeCCCCeecccEEEEeecceEEEcccccCCCCcccccCCCCeEEeccEEeeceEEEEEEEEeeccchhhHhhhhcCCCCC
Q 002230 263 HLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDD 342 (950)
Q Consensus 263 ~l~~Gd~vPaDgill~g~~l~VDeS~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~~~~~~~ 342 (950)
.|+|||+||+||++++|++ .||||+|||||.|+.|.+++. +++||.+.+|..+++|+++|.+|.+++|.+++++++..
T Consensus 237 ~VrpGE~IPvDG~V~~G~s-~vDeS~iTGEs~PV~k~~Gd~-V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~ 314 (713)
T COG2217 237 LVRPGERIPVDGVVVSGSS-SVDESMLTGESLPVEKKPGDE-VFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSS 314 (713)
T ss_pred EECCCCEecCCeEEEeCcE-EeecchhhCCCCCEecCCCCE-EeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhC
Confidence 9999999999999999997 999999999999999999886 99999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHHHHHH
Q 002230 343 ETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTL 422 (950)
Q Consensus 343 ~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~lav~l 422 (950)
++|.|+..|+++.++++.++++++++|++|.+.. + ..+...+..++++++++|||+|.+++|+
T Consensus 315 Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~-------~----------~~~~~a~~~a~avLVIaCPCALgLAtP~ 377 (713)
T COG2217 315 KAPIQRLADRVASYFVPVVLVIAALTFALWPLFG-------G----------GDWETALYRALAVLVIACPCALGLATPT 377 (713)
T ss_pred CchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhc-------C----------CcHHHHHHHHHhheeeeCccHHHhHHHH
Confidence 9999999999999999999999999998764321 0 0345678899999999999999999999
Q ss_pred HHHHHHHHHhccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeeeccCCCCCCCCCCCCChHHHHHHH
Q 002230 423 SLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLL 502 (950)
Q Consensus 423 ~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 502 (950)
++..++.+.+++|+|+|+.+++|+++++|+|+||||||||+|+|+|+++...+. + .++.+.+
T Consensus 378 ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~--~--------------e~~~L~l-- 439 (713)
T COG2217 378 AILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG--D--------------EDELLAL-- 439 (713)
T ss_pred HHHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC--C--------------HHHHHHH--
Confidence 999999999999999999999999999999999999999999999999876533 0 1233332
Q ss_pred HHHHhcCCCceeecCCCceeecCChhhhHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEcCCCcEEEEEcC
Q 002230 503 QSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKG 582 (950)
Q Consensus 503 ~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~pF~s~~k~msvvv~~~~~~~~~~~KG 582 (950)
+.+ ++ ..+.||..+|+++++...+... .+..+.+| -.++.-+..+.. +.-|
T Consensus 440 -aAa------lE-------~~S~HPiA~AIv~~a~~~~~~~------~~~~~~i~------G~Gv~~~v~g~~---v~vG 490 (713)
T COG2217 440 -AAA------LE-------QHSEHPLAKAIVKAAAERGLPD------VEDFEEIP------GRGVEAEVDGER---VLVG 490 (713)
T ss_pred -HHH------HH-------hcCCChHHHHHHHHHHhcCCCC------ccceeeec------cCcEEEEECCEE---EEEc
Confidence 211 22 2278999999999888765211 00111222 122222222322 2337
Q ss_pred chHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeeccCCCC
Q 002230 583 ASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMR 662 (950)
Q Consensus 583 a~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr 662 (950)
.+..+.+. +.. .+. ..+..+.+..+|..++.++ .|..++|+++++|++|
T Consensus 491 ~~~~~~~~--------~~~--~~~-----~~~~~~~~~~~G~t~v~va----------------~dg~~~g~i~~~D~~R 539 (713)
T COG2217 491 NARLLGEE--------GID--LPL-----LSERIEALESEGKTVVFVA----------------VDGKLVGVIALADELR 539 (713)
T ss_pred CHHHHhhc--------CCC--ccc-----hhhhHHHHHhcCCeEEEEE----------------ECCEEEEEEEEeCCCC
Confidence 76654321 110 110 3445667788898777777 4568999999999999
Q ss_pred ccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHH
Q 002230 663 PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLV 742 (950)
Q Consensus 663 ~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V 742 (950)
|+++++|++||+.|+++.|+||||..+|+++|+++||.. ++|.+.|+||.++|
T Consensus 540 ~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~---------------------------v~AellPedK~~~V 592 (713)
T COG2217 540 PDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE---------------------------VRAELLPEDKAEIV 592 (713)
T ss_pred hhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh---------------------------heccCCcHHHHHHH
Confidence 999999999999999999999999999999999999965 99999999999999
Q ss_pred HHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002230 743 KHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLT 822 (950)
Q Consensus 743 ~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~ 822 (950)
+.||++ |++|+|+|||.||+|||++|||||||| +|+|+|+++||+++++|++..++++++.+|+++++|++|+.|++.
T Consensus 593 ~~l~~~-g~~VamVGDGINDAPALA~AdVGiAmG-~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~ 670 (713)
T COG2217 593 RELQAE-GRKVAMVGDGINDAPALAAADVGIAMG-SGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFG 670 (713)
T ss_pred HHHHhc-CCEEEEEeCCchhHHHHhhcCeeEeec-CCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998 999999999999999999999999999 799999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 002230 823 VNVVALIVNFSS 834 (950)
Q Consensus 823 ~N~~~~~~~~~~ 834 (950)
||+++++++..+
T Consensus 671 yn~~~iplA~~g 682 (713)
T COG2217 671 YNAIAIPLAAGG 682 (713)
T ss_pred HHHHHHHHHHHh
Confidence 999999998865
No 22
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=2.4e-88 Score=816.36 Aligned_cols=737 Identities=24% Similarity=0.341 Sum_probs=585.0
Q ss_pred HHhhcCCCccCCCCCccHH---HHHHHHHhhHHHHHHHHHHHHHHHhhccccCCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 002230 146 RKEIYGINKFTESPARGFW---VYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDY 222 (950)
Q Consensus 146 r~~~~G~N~~~~~~~~~f~---~~~~~~~~~~~~~il~i~a~~s~~~~~~~~~~~~~~~d~~~i~~~illv~~v~~~~~~ 222 (950)
+...|-.|.+...++..+- +.+|+||++..+++|++.++++.++ +.+ +...+.++|+++|+.+++++|.
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~~-------~~~~~~~~pl~~vl~~t~iKd~ 99 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LSP-------FNPYTTLVPLLFVLGITAIKDA 99 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-ccc-------cCccceeeceeeeehHHHHHHH
Confidence 4458899999877654433 7899999999999999999999998 532 2233456799999999999999
Q ss_pred HHHHHHHHhHhhhcCCeEEEEeCCe-EEEEecCCcCCCcEEEeCCCCeecccEEEEeecc----eEEEcccccCCCCccc
Q 002230 223 KQSLQFKDLDREKKKITVQVARNGF-RRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFS----VLINESSLTGESEPVN 297 (950)
Q Consensus 223 ~~~~~~~~l~~~~~~~~v~V~R~g~-~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g~~----l~VDeS~LTGEs~pv~ 297 (950)
.++.++++.|++.|+.++.|.|++. ..+..|++|+|||+|++..++.+|||.++++++. |+|++++|+||++.+.
T Consensus 100 ~eD~rR~~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~ 179 (1151)
T KOG0206|consen 100 IEDYRRHKQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKV 179 (1151)
T ss_pred HhhhhhhhccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccce
Confidence 9999999999999999999999644 8999999999999999999999999999999875 9999999999999887
Q ss_pred cc----------------------------------------------CCCCeEEeccEEeec-eEEEEEEEEeeccchh
Q 002230 298 VN----------------------------------------------ALNPFLLSGTKVQNG-SCKMLVTTVGMRTQWG 330 (950)
Q Consensus 298 k~----------------------------------------------~~~~~l~sGt~v~~G-~~~~~V~~~G~~T~~g 330 (950)
|. ..++.+++|+++.+. .+.+.|+.+|++|
T Consensus 180 k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dt--- 256 (1151)
T KOG0206|consen 180 KQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDT--- 256 (1151)
T ss_pred eeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcc---
Confidence 61 012357889999874 5899999999999
Q ss_pred hHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccC--CCccccCCcc-hHHHHHHHHHHHHH
Q 002230 331 KLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQE--GTHWTWSGDD-ALEILEFFAIAVTI 407 (950)
Q Consensus 331 ~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~i~i 407 (950)
|++.+...++.+++++++.+|.....+..+.++++++..+... ........ +..|+....+ .......|+.++.+
T Consensus 257 K~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il 334 (1151)
T KOG0206|consen 257 KLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFA--IWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIIL 334 (1151)
T ss_pred hHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhh--eeeeecccccCchhhhcCchHHHHHHHHHHHHHhh
Confidence 6777777788999999999998766655554444443333211 11111111 1112222221 12334556677778
Q ss_pred HHHHhcCchHHHHHHHHHHHHH------HHh----ccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEccee
Q 002230 408 VVVAVPEGLPLAVTLSLAFAMK------KMM----NDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEI 477 (950)
Q Consensus 408 lvvavP~~L~lav~l~l~~~~~------~~~----~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~ 477 (950)
+...+|.+|...+.+.-.+.+. .|. ...+.+|+.+..|+||++++|++|||||||+|.|++.+|.+.|..
T Consensus 335 ~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~ 414 (1151)
T KOG0206|consen 335 YQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTS 414 (1151)
T ss_pred hhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcc
Confidence 8889999999888777666553 233 347889999999999999999999999999999999999999887
Q ss_pred eeccCCCCC------C----------C------------CCCCCChHHHHHHHHHHHhcCCCceeecCC--CceeecCCh
Q 002230 478 KEVDNSKGT------P----------A------------FGSSIPASASKLLLQSIFNNTGGEVVIGEG--NKTEILGTP 527 (950)
Q Consensus 478 ~~~~~~~~~------~----------~------------~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~--~~~~~~g~p 527 (950)
|....+... . . ..+....+....+..++++||+...+.+++ ...+.+.+|
T Consensus 415 yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SP 494 (1151)
T KOG0206|consen 415 YGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESP 494 (1151)
T ss_pred cccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCC
Confidence 754322100 0 0 000012233445667888998877776333 245668999
Q ss_pred hhhHHHHHHHHcCCChHHH------------hhhcceEEEecCCCCCceEEEEEEcCCCcEEEEEcCchHHHHHhccccc
Q 002230 528 TETAILEFGLLLGGDFQAE------------RQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFL 595 (950)
Q Consensus 528 ~e~All~~a~~~g~~~~~~------------~~~~~i~~~~pF~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~ 595 (950)
+|.|+++.|++.|..+..+ ...++++++.+|+|.||||||+++.|++++.+|||||+.+|++++..
T Consensus 495 DE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~-- 572 (1151)
T KOG0206|consen 495 DEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSK-- 572 (1151)
T ss_pred cHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhh--
Confidence 9999999999999776332 34899999999999999999999999999999999999999999874
Q ss_pred cCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCC---------------C-------CCCCCCCCceEEEe
Q 002230 596 NSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF---------------S-------ADAPIPTEGYTCIG 653 (950)
Q Consensus 596 ~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~---------------~-------~~~~~~e~~l~~lG 653 (950)
-....++...+++++||.+||||||+|||+++++. . +..+.+|+||+++|
T Consensus 573 --------~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLG 644 (1151)
T KOG0206|consen 573 --------NGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLG 644 (1151)
T ss_pred --------cchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhc
Confidence 23456677788999999999999999999998761 1 11256799999999
Q ss_pred eeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc-----------------------------
Q 002230 654 IVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG----------------------------- 704 (950)
Q Consensus 654 ~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~----------------------------- 704 (950)
.+++||+|++||+++|+.|++||||+||+|||+.+||.+|+..|++..++.
T Consensus 645 ATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~ 724 (1151)
T KOG0206|consen 645 ATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRK 724 (1151)
T ss_pred ceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999986532
Q ss_pred ------------------eeeeCcccccCCHHH----Hhhhh--ccccEEeecChhhHHHHHHHHhhhCCCEEEEEcCCc
Q 002230 705 ------------------IAIEGPEFREKSDEE----LSKLI--PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGT 760 (950)
Q Consensus 705 ------------------~vi~g~~~~~~~~~~----~~~~~--~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ 760 (950)
++|+|+.+....+.+ +.++. ++..+|||++|.||+.+|+..++..+.+++++|||+
T Consensus 725 ~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGA 804 (1151)
T KOG0206|consen 725 FTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGA 804 (1151)
T ss_pred hhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCC
Confidence 344555544322221 22222 566799999999999999999877789999999999
Q ss_pred cCHHhhhcCCcceeecCCCcHH--HHhcCCEEeccCChhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 002230 761 NDAPALHEADIGLAMGIAGTEV--AKESADVIILDDNFSTIVTV-AKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACL 837 (950)
Q Consensus 761 ND~~al~~AdvGiamg~~g~~~--ak~~aDivl~~~~~~~i~~~-i~~gR~~~~~i~k~i~~~l~~N~~~~~~~~~~~~~ 837 (950)
||++|+++||||| |++|.|. |..+||+.+.. |.-+-++ +.|||+.|.|+.+++.|.+++|+...++.|++.++
T Consensus 805 NDVsMIQ~AhVGV--GIsG~EGmQAvmsSD~AIaq--FrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~ 880 (1151)
T KOG0206|consen 805 NDVSMIQEAHVGV--GISGQEGMQAVMSSDFAIAQ--FRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFF 880 (1151)
T ss_pred ccchheeeCCcCe--eeccchhhhhhhcccchHHH--HHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 9999999999999 6677775 88999999988 8888886 69999999999999999999999999999999887
Q ss_pred cC---CCChhHHHHHHHHHHHHHHHHHHhcc--CCCCccccccCCC----CCCCCCcCHHHHHHHHHHHHHHHHHHHHHH
Q 002230 838 TG---NAPLTAVQLLWVNMIMDTLGALALAT--EPPNGDLMKRSPV----GRKGNFISNVMWRNILGQSLYQFLIIWYLQ 908 (950)
Q Consensus 838 ~~---~~pl~~~qll~~nli~d~l~~lal~~--e~p~~~l~~~~P~----~~~~~li~~~~~~~i~~~~~~~~~~~~~l~ 908 (950)
++ +..+..+++.++|++++.+|.+++|. .+.+++.+.+.|. +++..++++..+..|+..++||++++|++.
T Consensus 881 ~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sli~Ff~~ 960 (1151)
T KOG0206|consen 881 NGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSLVIFFLP 960 (1151)
T ss_pred CCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhheeeeeee
Confidence 65 45789999999999999999999986 3445555556664 444556676666667779999999998765
Q ss_pred H
Q 002230 909 T 909 (950)
Q Consensus 909 ~ 909 (950)
+
T Consensus 961 ~ 961 (1151)
T KOG0206|consen 961 Y 961 (1151)
T ss_pred H
Confidence 4
No 23
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-82 Score=697.68 Aligned_cols=713 Identities=22% Similarity=0.300 Sum_probs=556.7
Q ss_pred HHHhhcCCCccCCCCCc--cHH-HHHHHHHhhHHHHHHHHHHHHHHHhhccccCCCCCcchhHHHHHHHHHHHHHHHHHH
Q 002230 145 RRKEIYGINKFTESPAR--GFW-VYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSD 221 (950)
Q Consensus 145 ~r~~~~G~N~~~~~~~~--~f~-~~~~~~~~~~~~~il~i~a~~s~~~~~~~~~~~~~~~d~~~i~~~illv~~v~~~~~ 221 (950)
.++.+|-+|.+...++. +|+ ..+++||+-+.+.++++.++.++++.+.. | | ..+...++.++.+++.+++
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~i-g----~--l~ty~~pl~fvl~itl~ke 146 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKI-G----Y--LSTYWGPLGFVLTITLIKE 146 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchhee-c----c--hhhhhHHHHHHHHHHHHHH
Confidence 34578888888766543 333 56899999999999999999998876643 2 2 2334567888888999999
Q ss_pred HHHHHHHHHhHhhhcCCeEEEE-eCCeEEEEecCCcCCCcEEEeCCCCeecccEEEEeec----ceEEEcccccCCCCcc
Q 002230 222 YKQSLQFKDLDREKKKITVQVA-RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGF----SVLINESSLTGESEPV 296 (950)
Q Consensus 222 ~~~~~~~~~l~~~~~~~~v~V~-R~g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g~----~l~VDeS~LTGEs~pv 296 (950)
..++.++++-+++.|+...+++ |+|...+ ++++|+|||+|.++.+++||||.+++.++ +|.|.+-.|+||++.+
T Consensus 147 avdd~~r~~rd~~~Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWK 225 (1051)
T KOG0210|consen 147 AVDDLKRRRRDRELNSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWK 225 (1051)
T ss_pred HHHHHHHHHhhhhhhhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCcccce
Confidence 9999999998988888888877 7776655 99999999999999999999999999865 3899999999999987
Q ss_pred ccc----------------------------------------------CCCCeEEeccEEeeceEEEEEEEEeeccchh
Q 002230 297 NVN----------------------------------------------ALNPFLLSGTKVQNGSCKMLVTTVGMRTQWG 330 (950)
Q Consensus 297 ~k~----------------------------------------------~~~~~l~sGt~v~~G~~~~~V~~~G~~T~~g 330 (950)
.|- .-++.++++|.+.+|.+.++|++||.+|
T Consensus 226 Lrl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dt--- 302 (1051)
T KOG0210|consen 226 LRLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDT--- 302 (1051)
T ss_pred eeccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccH---
Confidence 650 0135799999999999999999999999
Q ss_pred hHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHH
Q 002230 331 KLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVV 410 (950)
Q Consensus 331 ~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvv 410 (950)
+-+.+...++.+-.-++..+|.+.+++....+.++++.... ..+ +. .|..++..++.++..
T Consensus 303 RsvMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~-------~g~--~~----------~wyi~~~RfllLFS~ 363 (1051)
T KOG0210|consen 303 RSVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAM-------KGF--GS----------DWYIYIIRFLLLFSS 363 (1051)
T ss_pred HHHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHh-------hcC--CC----------chHHHHHHHHHHHhh
Confidence 45556667777777888999999998877766666543321 000 11 123345555666667
Q ss_pred HhcCchHHHHHHHHHHHHHHHhcc----ccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeeeccCC---
Q 002230 411 AVPEGLPLAVTLSLAFAMKKMMND----KALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNS--- 483 (950)
Q Consensus 411 avP~~L~lav~l~l~~~~~~~~~~----~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~--- 483 (950)
.+|.+|-..+.++...-.+.+.+| |.+||+.+..|+||++.++.+|||||||+|+|.+++++.+.-.|..+..
T Consensus 364 IIPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV 443 (1051)
T KOG0210|consen 364 IIPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEV 443 (1051)
T ss_pred hceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHH
Confidence 789999988888888877888776 6779999999999999999999999999999999999987544432110
Q ss_pred ------------CCCCC----CCCCCChHHHHHHHHHHHhcCCCceeecCCC-ceeecCChhhhHHHHHHHHcCCChHHH
Q 002230 484 ------------KGTPA----FGSSIPASASKLLLQSIFNNTGGEVVIGEGN-KTEILGTPTETAILEFGLLLGGDFQAE 546 (950)
Q Consensus 484 ------------~~~~~----~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~-~~~~~g~p~e~All~~a~~~g~~~~~~ 546 (950)
..... .....+..+ .-+.+++++||+.....+++| ..+...+|+|.||++|....|.....+
T Consensus 444 ~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv-~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~R 522 (1051)
T KOG0210|consen 444 SQHIQSLYTPGRNKGKGALSRVKKDMSARV-RNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKR 522 (1051)
T ss_pred HHHHHHhhCCCcccccccchhhcCcccHHH-HHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeec
Confidence 00000 011122222 334567888888887777664 456689999999999998888654322
Q ss_pred -------------hhhcceEEEecCCCCCceEEEEEEcC-CCcEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHH
Q 002230 547 -------------RQASKIVKVEPFNSVKKQMGVVIELP-EGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHL 612 (950)
Q Consensus 547 -------------~~~~~i~~~~pF~s~~k~msvvv~~~-~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~ 612 (950)
..+|+|+++|||+|+.|||+++|+.+ .+++..|.|||+.++....+. -+.+
T Consensus 523 d~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~---------------NdWl 587 (1051)
T KOG0210|consen 523 DRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQY---------------NDWL 587 (1051)
T ss_pred ccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccccc---------------chhh
Confidence 13799999999999999999999976 688999999998776544321 1356
Q ss_pred HHHHHHHHhcccceeEEEEEEcCCCCC---------------C--------CCCCCCCceEEEeeeeccCCCCccHHHHH
Q 002230 613 NETIEKFASEALRTLCLACMEIGNEFS---------------A--------DAPIPTEGYTCIGIVGIKDPMRPGVKESV 669 (950)
Q Consensus 613 ~~~~~~~a~~glR~l~~A~~~~~~~~~---------------~--------~~~~~e~~l~~lG~~~i~D~lr~~~~~~I 669 (950)
++...+||.+|+|||.+|.|.++++.. + -...+|.|+.++|+.|+||+++++++.++
T Consensus 588 eEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tL 667 (1051)
T KOG0210|consen 588 EEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTL 667 (1051)
T ss_pred hhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHH
Confidence 778899999999999999999986510 0 01256899999999999999999999999
Q ss_pred HHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc----------------------------eeeeCccccc---CCHH
Q 002230 670 AICRSAGITVRMVTGDNINTAKAIARECGILTDNG----------------------------IAIEGPEFRE---KSDE 718 (950)
Q Consensus 670 ~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~----------------------------~vi~g~~~~~---~~~~ 718 (950)
+.||+|||++||+|||+.+||..||+..++...+. ++|+|+.+.- .-++
T Consensus 668 ElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~ 747 (1051)
T KOG0210|consen 668 ELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYED 747 (1051)
T ss_pred HHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHH
Confidence 99999999999999999999999999999986542 6788877653 2345
Q ss_pred HHhhhhc--cccEEeecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHH--HHhcCCEEeccC
Q 002230 719 ELSKLIP--KIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEV--AKESADVIILDD 794 (950)
Q Consensus 719 ~~~~~~~--~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~--ak~~aDivl~~~ 794 (950)
|+.++.+ ...|+|||+|.||+++++.+|++.|+.|+++|||.||+.|+++||+|| |+-|.|. |.-|||+.+.+
T Consensus 748 Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~Gi--GI~gkEGkQASLAADfSItq- 824 (1051)
T KOG0210|consen 748 EFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGI--GIVGKEGKQASLAADFSITQ- 824 (1051)
T ss_pred HHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccce--eeecccccccchhccccHHH-
Confidence 6666553 345999999999999999999998999999999999999999999999 6666665 77889999988
Q ss_pred ChhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhH---HHHHHHHHHHHHHHHHHhccCC-CC
Q 002230 795 NFSTIVTVA-KWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTA---VQLLWVNMIMDTLGALALATEP-PN 869 (950)
Q Consensus 795 ~~~~i~~~i-~~gR~~~~~i~k~i~~~l~~N~~~~~~~~~~~~~~~~~pl~~---~qll~~nli~d~l~~lal~~e~-p~ 869 (950)
|+++.+++ -|||..|+|-.+.-||.+...++...++.++++...+.|..- +.|.-+..+++++|.++|..+. .+
T Consensus 825 -F~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSlv~d~Dv~ 903 (1051)
T KOG0210|consen 825 -FSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSLVLDRDVS 903 (1051)
T ss_pred -HHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhheeeeccccc
Confidence 99999985 669999999999999999999999999888877776666544 4466688899999999998744 33
Q ss_pred ccccccCCC----CCCCCCcCHHHHHHHHHHHHHHHHHHHHH
Q 002230 870 GDLMKRSPV----GRKGNFISNVMWRNILGQSLYQFLIIWYL 907 (950)
Q Consensus 870 ~~l~~~~P~----~~~~~li~~~~~~~i~~~~~~~~~~~~~l 907 (950)
+++-...|. -.+...++-+.+..|..-++||+.++.+.
T Consensus 904 ~~~a~~yPELYKeL~kgr~lSYKtF~iwvLISiYQG~vim~g 945 (1051)
T KOG0210|consen 904 ESLAVLYPELYKELTKGRSLSYKTFFIWVLISIYQGSVIMYG 945 (1051)
T ss_pred HHHHhhhHHHHHHHhcCCccchhhhhhhhhHHHHcccHHHHH
Confidence 333333342 11233445455555666799999887663
No 24
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.9e-82 Score=691.77 Aligned_cols=637 Identities=24% Similarity=0.378 Sum_probs=508.1
Q ss_pred HhcCHHHHHHHhCCCccCCCChhHHHHHHHHhhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhccccCC
Q 002230 117 VHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGW 196 (950)
Q Consensus 117 ~~~~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~il~i~a~~s~~~~~~~~~~ 196 (950)
..+.++.+.+.|...-+ ||+++| +++|++.||.|++.+++...|.||+- -|.+|.-|..-.+|++...+.-- .|.
T Consensus 19 ~~~p~eeVfeeL~~t~~-GLt~~E--~~eRlk~fG~NkleEkken~~lKFl~-Fm~~PlswVMEaAAimA~~Lang-~~~ 93 (942)
T KOG0205|consen 19 EAIPIEEVFEELLCTRE-GLTSDE--VEERLKIFGPNKLEEKKESKFLKFLG-FMWNPLSWVMEAAAIMAIGLANG-GGR 93 (942)
T ss_pred ccCchhhhHHHHhcCCC-CCchHH--HHHHHHhhCchhhhhhhhhHHHHHHH-HHhchHHHHHHHHHHHHHHHhcC-CCC
Confidence 45678888887766644 999988 99999999999998877766666543 35567778888888877665421 344
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcCCeEEEEeCCeEEEEecCCcCCCcEEEeCCCCeecccEEE
Q 002230 197 PKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLF 276 (950)
Q Consensus 197 ~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgil 276 (950)
+..|.|.+.|...+++...++.+.+|..-.....|.+...+ +..|+|||+|.++.+++||||||+.++.||+|||||+|
T Consensus 94 ~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~-KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRL 172 (942)
T KOG0205|consen 94 PPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAP-KAKVLRDGKWSEQEASILVPGDILSIKLGDIIPADARL 172 (942)
T ss_pred CcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCc-ccEEeecCeeeeeeccccccCceeeeccCCEecCccce
Confidence 56899998887777777777777777777667777665544 78999999999999999999999999999999999999
Q ss_pred EeecceEEEcccccCCCCcccccCCCCeEEeccEEeeceEEEEEEEEeeccchhhHhhhhcCCCCCCChhHHHHHHHHHH
Q 002230 277 VSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATI 356 (950)
Q Consensus 277 l~g~~l~VDeS~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~ 356 (950)
++|+-++||+|.|||||.|+.|.+++. +||||.+.+|++.|+|++||.+|..|+-..++.. ......+|+.++.+.++
T Consensus 173 l~gD~LkiDQSAlTGESLpvtKh~gd~-vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVds-t~~~GHFqkVLt~IGn~ 250 (942)
T KOG0205|consen 173 LEGDPLKIDQSALTGESLPVTKHPGDE-VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTGIGNF 250 (942)
T ss_pred ecCCccccchhhhcCCccccccCCCCc-eecccccccceEEEEEEEeccceeehhhHHhhcC-CCCcccHHHHHHhhhhH
Confidence 999999999999999999999999887 9999999999999999999999999999999887 45558899999988876
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHH-hcCchHHHHHHHHHHHHHHHhccc
Q 002230 357 IGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVA-VPEGLPLAVTLSLAFAMKKMMNDK 435 (950)
Q Consensus 357 i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvva-vP~~L~lav~l~l~~~~~~~~~~~ 435 (950)
....+.+ -.++.+...|..+. ........-+.++++. +|.|||..++.+++.+..+|+++|
T Consensus 251 ci~si~~---g~lie~~vmy~~q~---------------R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqg 312 (942)
T KOG0205|consen 251 CICSIAL---GMLIEITVMYPIQH---------------RLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQG 312 (942)
T ss_pred HHHHHHH---HHHHHHHhhhhhhh---------------hhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcc
Confidence 5433221 11222222221110 1112223334455555 999999999999999999999999
Q ss_pred cccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeeeccCCCCCCCCCCCCChHHHHHHHHHHHhcCCCceee
Q 002230 436 ALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVI 515 (950)
Q Consensus 436 ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~ 515 (950)
+++++++|+|.|+.++++|+|||||||.|+++|.+-.+. +- ....+.+.. ++.+ |.. +..+
T Consensus 313 AItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~e---v~----------v~gv~~D~~--~L~A-~rA--sr~e- 373 (942)
T KOG0205|consen 313 AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIE---VF----------VKGVDKDDV--LLTA-ARA--SRKE- 373 (942)
T ss_pred cHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcce---ee----------ecCCChHHH--HHHH-HHH--hhhc-
Confidence 999999999999999999999999999999999761110 00 001111211 1111 111 1111
Q ss_pred cCCCceeecCChhhhHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEcCCCcEEEEEcCchHHHHHhccccc
Q 002230 516 GEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFL 595 (950)
Q Consensus 516 ~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~pF~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~ 595 (950)
..+..|.|++..... .++.+..++.++..|||+..||....+..++|..+-.+|||||.|++.|..
T Consensus 374 --------n~DAID~A~v~~L~d----PKeara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~-- 439 (942)
T KOG0205|consen 374 --------NQDAIDAAIVGMLAD----PKEARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNE-- 439 (942)
T ss_pred --------ChhhHHHHHHHhhcC----HHHHhhCceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhc--
Confidence 347889999876543 477888999999999999999999999999999999999999999999974
Q ss_pred cCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeeccCCCCccHHHHHHHHHHC
Q 002230 596 NSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSA 675 (950)
Q Consensus 596 ~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~a 675 (950)
+.+.++.+.+.+++||++|+|.+++|++..++... +.......++|+.-+-||+|.+..++|++....
T Consensus 440 ---------~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~---~~~g~pw~~~gllp~fdpprhdsa~tirral~l 507 (942)
T KOG0205|consen 440 ---------DHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTK---ESPGGPWEFVGLLPLFDPPRHDSAETIRRALNL 507 (942)
T ss_pred ---------cCcchHHHHHHHHHHHHhcchhhhhhhhccccccc---cCCCCCcccccccccCCCCccchHHHHHHHHhc
Confidence 33456788999999999999999999998776422 223455789999999999999999999999999
Q ss_pred CCEEEEEcCCCHHHHHHHHHHcCCccC--CceeeeCcc-cccCCHHHHhhhhccccEEeecChhhHHHHHHHHhhhCCCE
Q 002230 676 GITVRMVTGDNINTAKAIARECGILTD--NGIAIEGPE-FREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEV 752 (950)
Q Consensus 676 Gi~v~m~TGD~~~ta~~ia~~~gi~~~--~~~vi~g~~-~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~ 752 (950)
|+.|.|+|||...-++..++++|.-++ ++.-+-|.. -..+.....++.+.+..=||.+.|++|..+|+.||++ |+.
T Consensus 508 Gv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfAgVfpehKy~iV~~Lq~r-~hi 586 (942)
T KOG0205|consen 508 GVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFAGVFPEHKYEIVKILQER-KHI 586 (942)
T ss_pred cceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCccccCHHHHHHHHHHHhhc-Cce
Confidence 999999999999999999999997642 101111111 1122223455666666789999999999999999999 999
Q ss_pred EEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002230 753 VAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVV 826 (950)
Q Consensus 753 v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~N~~ 826 (950)
++|+|||+||+|+||.||+|||+. .++++|+.+||+|++...++-|..++..+|.+|+|++.+..|.+...+-
T Consensus 587 ~gmtgdgvndapaLKkAdigiava-~atdaar~asdiVltepglSviI~avltSraIfqrmknytiyavsitir 659 (942)
T KOG0205|consen 587 VGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 659 (942)
T ss_pred ecccCCCcccchhhcccccceeec-cchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHhhheeeeehhHHH
Confidence 999999999999999999999998 9999999999999999999999999999999999999998887665544
No 25
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=7.3e-80 Score=749.45 Aligned_cols=641 Identities=20% Similarity=0.281 Sum_probs=480.8
Q ss_pred hhccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccChhhhhhhhccCChHHHHHhcCH
Q 002230 42 TANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGGV 121 (950)
Q Consensus 42 ~~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~v 121 (950)
+..|....|+.....+++..+++++.+.+..+.|+.. . . ..+...++..||.+.+.+-....+.++........-.
T Consensus 64 C~sCa~~Ie~aL~~~~GV~~v~Vn~at~k~~V~~d~~--~-~-~~I~~aI~~~Gy~a~~~~~~~~~~~~~~~~~~~~~~~ 139 (741)
T PRK11033 64 CPSCARKVENAVRQLAGVNQVQVLFATEKLVVDADND--I-R-AQVESAVQKAGFSLRDEQAAAAAPESRLKSENLPLIT 139 (741)
T ss_pred cHHHHHHHHHHHhcCCCeeeEEEEcCCCeEEEEeccc--c-h-HHHHHHHHhcccccccccchhhhHHHHHHHHHHHHHH
Confidence 4578888888888888889999999888877776433 1 1 3444556778998765421110011010000011100
Q ss_pred HHHHHHhCCCccCCCChhHHHHHHHHhhcCCCccCCCCCccHHHHHHHHHhhHH---HHHHH-HHHHHHHHhhccccCCC
Q 002230 122 EGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMT---LMILA-VCALVSLVVGIATEGWP 197 (950)
Q Consensus 122 ~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~---~~il~-i~a~~s~~~~~~~~~~~ 197 (950)
-.....+..-. .++... . .+...... ......+|++..|+.++... +-.|+ ++++.+++++
T Consensus 140 ~~~~~~~~~~~-~~~~~~---~-~~~~~~~~---~~~~~~~~~~~a~~~l~~~~~~~~~~L~~~a~~~a~~~~------- 204 (741)
T PRK11033 140 LAVMMAISWGL-EQFNHP---F-GQLAFIAT---TLVGLYPIARKALRLIRSGSPFAIETLMSVAAIGALFIG------- 204 (741)
T ss_pred HHHHHHHHHHH-hhhhhH---H-HHHHHHHH---HHHHHHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHc-------
Confidence 01111211100 011110 0 11100000 01235688899999987532 22233 3444444443
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcCCeEEEEeCCeEEEEecCCcCCCcEEEeCCCCeecccEEEE
Q 002230 198 KGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFV 277 (950)
Q Consensus 198 ~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill 277 (950)
.|.++..+++.+++.-.+....+++.++..++|.+ ..+..++|+|||++++|++++|+|||+|.|++||+|||||+++
T Consensus 205 -~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~-l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi 282 (741)
T PRK11033 205 -ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMA-LVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLL 282 (741)
T ss_pred -chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEE
Confidence 25555444333333333333333333333334443 4567899999999999999999999999999999999999999
Q ss_pred eecceEEEcccccCCCCcccccCCCCeEEeccEEeeceEEEEEEEEeeccchhhHhhhhcCCCCCCChhHHHHHHHHHHH
Q 002230 278 SGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATII 357 (950)
Q Consensus 278 ~g~~l~VDeS~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i 357 (950)
+|+ ..||||+|||||.|+.|..++. +|+||.+.+|.++++|+++|.+|.+|+|.+++.+++.+++|+|+.+++++.++
T Consensus 283 ~g~-~~vdes~lTGEs~Pv~k~~Gd~-V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~ 360 (741)
T PRK11033 283 SPF-ASFDESALTGESIPVERATGEK-VPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIY 360 (741)
T ss_pred ECc-EEeecccccCCCCCEecCCCCe-eccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHH
Confidence 997 5999999999999999998775 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhccccc
Q 002230 358 GKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKAL 437 (950)
Q Consensus 358 ~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~lav~l~l~~~~~~~~~~~il 437 (950)
+++++.+++++|++|...+ +. .+...+..++++++++|||+|.+++|+++..+..+++|+|++
T Consensus 361 ~~~v~~~a~~~~~~~~~~~-------~~----------~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gil 423 (741)
T PRK11033 361 TPAIMLVALLVILVPPLLF-------AA----------PWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGAL 423 (741)
T ss_pred HHHHHHHHHHHHHHHHHHc-------cC----------CHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeE
Confidence 9999999999988763211 00 234567788999999999999999999999999999999999
Q ss_pred cccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeeeccCCCCCCCCCCCCChHHHHHHHHHHHhcCCCceeecC
Q 002230 438 VRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGE 517 (950)
Q Consensus 438 vr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~ 517 (950)
+|+.+++|+|+++++||||||||||+|+|+|.+++..+... .++.+.+ +.. .+
T Consensus 424 ik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~~---------------~~~~l~~---aa~------~e--- 476 (741)
T PRK11033 424 IKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATGIS---------------ESELLAL---AAA------VE--- 476 (741)
T ss_pred EcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCCCC---------------HHHHHHH---HHH------Hh---
Confidence 99999999999999999999999999999999986533210 1122222 111 11
Q ss_pred CCceeecCChhhhHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEE---EEEEcCCCcEEEEEcCchHHHHHhcccc
Q 002230 518 GNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMG---VVIELPEGGFRVHCKGASEIILAACDKF 594 (950)
Q Consensus 518 ~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~pF~s~~k~ms---vvv~~~~~~~~~~~KGa~e~il~~c~~~ 594 (950)
..+.||.++|+++++.+.+.+ +||.++++.+. +.....+..+ .-|+++.+.+
T Consensus 477 ----~~s~hPia~Ai~~~a~~~~~~-------------~~~~~~~~~~~g~Gv~~~~~g~~~---~ig~~~~~~~----- 531 (741)
T PRK11033 477 ----QGSTHPLAQAIVREAQVRGLA-------------IPEAESQRALAGSGIEGQVNGERV---LICAPGKLPP----- 531 (741)
T ss_pred ----cCCCCHHHHHHHHHHHhcCCC-------------CCCCcceEEEeeEEEEEEECCEEE---EEecchhhhh-----
Confidence 126799999999998776543 46777776652 2222223222 2377765432
Q ss_pred ccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeeccCCCCccHHHHHHHHHH
Q 002230 595 LNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRS 674 (950)
Q Consensus 595 ~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~ 674 (950)
++ ..+.+.++.+..+|+|++++|+ |.+++|+++++|++|||++++|++|++
T Consensus 532 ---------~~----~~~~~~~~~~~~~g~~~v~va~----------------~~~~~g~i~l~d~~r~~a~~~i~~L~~ 582 (741)
T PRK11033 532 ---------LA----DAFAGQINELESAGKTVVLVLR----------------NDDVLGLIALQDTLRADARQAISELKA 582 (741)
T ss_pred ---------cc----HHHHHHHHHHHhCCCEEEEEEE----------------CCEEEEEEEEecCCchhHHHHHHHHHH
Confidence 11 2244556788999999999994 568999999999999999999999999
Q ss_pred CCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHHHHHhhhCCCEEE
Q 002230 675 AGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVA 754 (950)
Q Consensus 675 aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~ 754 (950)
.|++++|+|||+..+|.++|+++||. .+++..|+||..+|+.+|+. +.|+
T Consensus 583 ~gi~~~llTGd~~~~a~~ia~~lgi~----------------------------~~~~~~p~~K~~~v~~l~~~--~~v~ 632 (741)
T PRK11033 583 LGIKGVMLTGDNPRAAAAIAGELGID----------------------------FRAGLLPEDKVKAVTELNQH--APLA 632 (741)
T ss_pred CCCEEEEEcCCCHHHHHHHHHHcCCC----------------------------eecCCCHHHHHHHHHHHhcC--CCEE
Confidence 99999999999999999999999995 56788999999999999954 5799
Q ss_pred EEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002230 755 VTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSS 834 (950)
Q Consensus 755 ~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~N~~~~~~~~~~ 834 (950)
|+|||.||+|||++|||||||| +|++.++++||++++++++..+.+++++||+++.||++|+.|++.||++.+++++++
T Consensus 633 mvGDgiNDapAl~~A~vgia~g-~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~~i~~a~~g 711 (741)
T PRK11033 633 MVGDGINDAPAMKAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITIALGLKAIFLVTTLLG 711 (741)
T ss_pred EEECCHHhHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999 899999999999999999999999999999999999999999999999998888753
No 26
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.5e-80 Score=709.73 Aligned_cols=668 Identities=22% Similarity=0.299 Sum_probs=511.1
Q ss_pred hhccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccChhhhh-hhhc-----cCChH--
Q 002230 42 TANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELG-SIVE-----GHDIK-- 113 (950)
Q Consensus 42 ~~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~-----~~~~~-- 113 (950)
+..+....|+.+.+.++++.++|...+.++.+.|+.. ...+.++.+.+++.||........ ...+ ..+.+
T Consensus 157 c~s~~~~ie~~l~~l~gV~~~sv~~~t~~~~V~~~~~--~~~pr~i~k~ie~~~~~~~~~~~~~~~~~~~l~~~~ei~~w 234 (951)
T KOG0207|consen 157 CASCVSKIESILERLRGVKSFSVSLATDTAIVVYDPE--ITGPRDIIKAIEETGFEASVRPYGDTTFKNSLKHKEEIRKW 234 (951)
T ss_pred ccchhhhhHHHHhhccCeeEEEEeccCCceEEEeccc--ccChHHHHHHHHhhcccceeeeccccchhhhhhhhhHHHhc
Confidence 3455667788889999999999999999999988776 677788888888888875433311 1111 00111
Q ss_pred ---HHHHhc-CHHH-HHH----------HhCCCccCCCChhHHHHHHHHhhcCCCccCC----CCCccHHHHHHHHHhhH
Q 002230 114 ---KLKVHG-GVEG-IAE----------KLSTSITDGISTSEHLLNRRKEIYGINKFTE----SPARGFWVYVWEALHDM 174 (950)
Q Consensus 114 ---~l~~~~-~v~~-l~~----------~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~----~~~~~f~~~~~~~~~~~ 174 (950)
.+...+ ++.= ++. ++......|+.-.. .. .+.+.. .-+++|+.-.|+++++.
T Consensus 235 ~~~fl~s~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l-------~~~L~~~vqf~~G~~fy~~A~ksL~~g 305 (951)
T KOG0207|consen 235 KRPFLISLGFSLPVSFAMIICPPLAWILALLVPFLPGLSYGN--SL-------SFVLATPVQFVGGRPFYLAAYKSLKRG 305 (951)
T ss_pred chHHHHHHHHHHHHHHHHHHhccchhhhhhhccccccchhhh--HH-------HhhhheeeEEecceeeHHHHHHHHhcC
Confidence 111111 0110 111 11113333444322 11 122222 25789999999999987
Q ss_pred HHHHH--H-HHHHHHHHhhccc------cCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh------hhcCCe
Q 002230 175 TLMIL--A-VCALVSLVVGIAT------EGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR------EKKKIT 239 (950)
Q Consensus 175 ~~~il--~-i~a~~s~~~~~~~------~~~~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~------~~~~~~ 239 (950)
...|- + +.+..++++.+.. ...+..+||...|++.++. +++|.++++..+..+ .+.+.+
T Consensus 306 ~~nMdvLv~L~t~aay~~S~~~~~~~~~~~~~~tfFdt~~MLi~fi~------lgr~LE~~Ak~kts~alskLmsl~p~~ 379 (951)
T KOG0207|consen 306 SANMDVLVVLGTTAAYFYSIFSLLAAVVFDSPPTFFDTSPMLITFIT------LGRWLESLAKGKTSEALSKLMSLAPSK 379 (951)
T ss_pred CCCceeehhhHHHHHHHHHHHHHHHHHHccCcchhccccHHHHHHHH------HHHHHHHHhhccchHHHHHHhhcCccc
Confidence 65442 1 1222222222211 1224567887666655544 389999988776543 345678
Q ss_pred EEEEeCCe-EEEEecCCcCCCcEEEeCCCCeecccEEEEeecceEEEcccccCCCCcccccCCCCeEEeccEEeeceEEE
Q 002230 240 VQVARNGF-RRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKM 318 (950)
Q Consensus 240 v~V~R~g~-~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g~~l~VDeS~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~ 318 (950)
+.++.+|+ .++|+.+.|.+||+|.+.||++||+||++++|++ +||||++|||+.||.|..+++ +.+||.+.+|...+
T Consensus 380 a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~Gss-~VDEs~iTGEs~PV~Kk~gs~-ViaGsiN~nG~l~V 457 (951)
T KOG0207|consen 380 ATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVDGSS-EVDESLITGESMPVPKKKGST-VIAGSINLNGTLLV 457 (951)
T ss_pred ceEeecCCcceEeeeeeeccCCEEEECCCCccccccEEEeCce-eechhhccCCceecccCCCCe-eeeeeecCCceEEE
Confidence 89999886 8999999999999999999999999999999986 999999999999999998886 99999999999999
Q ss_pred EEEEEeeccchhhHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHH
Q 002230 319 LVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEIL 398 (950)
Q Consensus 319 ~V~~~G~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (950)
.+|++|.+|.+++|.+++++++..++|+|+.+|+++.+|+++++++++.+|++|++...+...+. ..| ...+.
T Consensus 458 kaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~---~~~----~~~~~ 530 (951)
T KOG0207|consen 458 KATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVFKYP---RSF----FDAFS 530 (951)
T ss_pred EEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccccCc---chh----hHHHH
Confidence 99999999999999999999999999999999999999999999999999999976443221110 111 13567
Q ss_pred HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceee
Q 002230 399 EFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIK 478 (950)
Q Consensus 399 ~~~~~~i~ilvvavP~~L~lav~l~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~ 478 (950)
..|..++++++++|||+|.||+|++...+....+++|+|+|..+++|.+.++++|+||||||||+|+++|+++....+..
T Consensus 531 ~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~~ 610 (951)
T KOG0207|consen 531 HAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNPI 610 (951)
T ss_pred HHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCcc
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999987655421
Q ss_pred eccCCCCCCCCCCCCChHHHHHHHHHHHhcCCCceeecCCCceeecCChhhhHHHHHHHHcCCChHHHhhhcceEEEecC
Q 002230 479 EVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPF 558 (950)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~pF 558 (950)
. ..+.+.+. +..+. .+.||..+|+++++++..... ....+.....|
T Consensus 611 ~--------------~~e~l~~v---------~a~Es-------~SeHPig~AIv~yak~~~~~~----~~~~~~~~~~~ 656 (951)
T KOG0207|consen 611 S--------------LKEALALV---------AAMES-------GSEHPIGKAIVDYAKEKLVEP----NPEGVLSFEYF 656 (951)
T ss_pred c--------------HHHHHHHH---------HHHhc-------CCcCchHHHHHHHHHhccccc----Cccccceeecc
Confidence 0 01122111 11111 277999999999998776110 11112223333
Q ss_pred CCCCceEEEEEEcCCCcEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCC
Q 002230 559 NSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF 638 (950)
Q Consensus 559 ~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~ 638 (950)
..+-+. +-+...+.. .+-|.-+.+.. +|...+ +.+++..++....|..+.+++
T Consensus 657 pg~g~~--~~~~~~~~~---i~iGN~~~~~r--------~~~~~~------~~i~~~~~~~e~~g~tvv~v~-------- 709 (951)
T KOG0207|consen 657 PGEGIY--VTVTVDGNE---VLIGNKEWMSR--------NGCSIP------DDILDALTESERKGQTVVYVA-------- 709 (951)
T ss_pred cCCCcc--cceEEeeeE---EeechHHHHHh--------cCCCCc------hhHHHhhhhHhhcCceEEEEE--------
Confidence 333322 222222223 23366555432 332222 236677777788898888888
Q ss_pred CCCCCCCCCceEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHH
Q 002230 639 SADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDE 718 (950)
Q Consensus 639 ~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~ 718 (950)
-|.++.|+++++|++|||+..+|+.||+.|+++.|+||||..+|+++|+++||..
T Consensus 710 --------vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~~----------------- 764 (951)
T KOG0207|consen 710 --------VNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGIDN----------------- 764 (951)
T ss_pred --------ECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcce-----------------
Confidence 4778999999999999999999999999999999999999999999999999764
Q ss_pred HHhhhhccccEEeecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhH
Q 002230 719 ELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFST 798 (950)
Q Consensus 719 ~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~ 798 (950)
|+|...|+||.+.|+.+|++ |..|+|+|||+||+|||.+|||||+|| .|+++|.++||+|++.+|+..
T Consensus 765 ----------V~aev~P~~K~~~Ik~lq~~-~~~VaMVGDGINDaPALA~AdVGIaig-~gs~vAieaADIVLmrn~L~~ 832 (951)
T KOG0207|consen 765 ----------VYAEVLPEQKAEKIKEIQKN-GGPVAMVGDGINDAPALAQADVGIAIG-AGSDVAIEAADIVLMRNDLRD 832 (951)
T ss_pred ----------EEeccCchhhHHHHHHHHhc-CCcEEEEeCCCCccHHHHhhccceeec-cccHHHHhhCCEEEEccchhh
Confidence 99999999999999999999 999999999999999999999999999 889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002230 799 IVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFS 833 (950)
Q Consensus 799 i~~~i~~gR~~~~~i~k~i~~~l~~N~~~~~~~~~ 833 (950)
++.++..+|++..||+.|+.|+++||++.++++..
T Consensus 833 v~~ai~LSrkt~~rIk~N~~~A~~yn~~~IpIAag 867 (951)
T KOG0207|consen 833 VPFAIDLSRKTVKRIKLNFVWALIYNLVGIPIAAG 867 (951)
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhee
Confidence 99999999999999999999999999999998874
No 27
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=7e-77 Score=701.21 Aligned_cols=492 Identities=39% Similarity=0.600 Sum_probs=430.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHh-hhcCCeEEEEeCCeEEEEecCCcCCCcEEEeCCCCeecccEEEEeecceEEEcc
Q 002230 209 SILLVVFVTATSDYKQSLQFKDLDR-EKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINES 287 (950)
Q Consensus 209 ~illv~~v~~~~~~~~~~~~~~l~~-~~~~~~v~V~R~g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g~~l~VDeS 287 (950)
.+++..++....+++.++..+++.+ ..++.+++|+|+| +++|++++|+|||+|.+++||+|||||++++|+ +.||||
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~-~~vdes 82 (499)
T TIGR01494 5 LVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSGS-CFVDES 82 (499)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEcc-EEEEcc
Confidence 3455666667777777777777765 3567899999999 999999999999999999999999999999995 799999
Q ss_pred cccCCCCcccccCCCCeEEeccEEeeceEEEEEEEEeeccchhhHhhhhcCCCCCCChhHHHHHHHH-HHHHHHHHHHHH
Q 002230 288 SLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVA-TIIGKIGLFFAV 366 (950)
Q Consensus 288 ~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~~~~~~~~tplq~~l~~~a-~~i~~~~l~~a~ 366 (950)
+|||||.|+.|.+++. +++||.+.+|++++.|+.+|.+|..+++...+.++...++|++++.++++ .++.++.+++++
T Consensus 83 ~LTGEs~pv~k~~g~~-v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~ 161 (499)
T TIGR01494 83 NLTGESVPVLKTAGDA-VFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIAL 161 (499)
T ss_pred cccCCCCCeeeccCCc-cccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988775 99999999999999999999999999999999888877899999999999 788888888888
Q ss_pred HHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhccccccccchhhhc
Q 002230 367 VTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACET 446 (950)
Q Consensus 367 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~lav~l~l~~~~~~~~~~~ilvr~~~~~E~ 446 (950)
+++++|...+.. .. .+...+..++++++++|||+||+++++++..+..+|.++|+++|+++++|+
T Consensus 162 ~~~~~~~~~~~~------------~~---~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~ 226 (499)
T TIGR01494 162 AVFLFWAIGLWD------------PN---SIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEE 226 (499)
T ss_pred HHHHHHHHHHcc------------cc---cHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhh
Confidence 777776432110 00 245678899999999999999999999999999999999999999999999
Q ss_pred cCCeeEEeeCCccccccCceEEEEEEEcceeeeccCCCCCCCCCCCCChHHHHHHHHHHHhcCCCceeecCCCceeecCC
Q 002230 447 MGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGT 526 (950)
Q Consensus 447 lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~ 526 (950)
||+++++|||||||||+|+|+|.+++..+. .+.++|
T Consensus 227 l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~--------------------------------------------~~~s~h 262 (499)
T TIGR01494 227 LGKVDYICSDKTGTLTKNEMSFKKVSVLGG--------------------------------------------EYLSGH 262 (499)
T ss_pred ccCCcEEEeeCCCccccCceEEEEEEecCC--------------------------------------------CcCCCC
Confidence 999999999999999999999998875321 012679
Q ss_pred hhhhHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEcCCCcEEEEEcCchHHHHHhccccccCCCeeecCCH
Q 002230 527 PTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNE 606 (950)
Q Consensus 527 p~e~All~~a~~~g~~~~~~~~~~~i~~~~pF~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~ 606 (950)
|.|.|+++++.... ++..||++.+|+|+++++.+++ .++||+++.+++.|..
T Consensus 263 p~~~ai~~~~~~~~------------~~~~~f~~~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~------------- 314 (499)
T TIGR01494 263 PDERALVKSAKWKI------------LNVFEFSSVRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD------------- 314 (499)
T ss_pred hHHHHHHHHhhhcC------------cceeccCCCCceEEEEEecCCc---EEEeCCHHHHHHhhHH-------------
Confidence 99999999886421 2568999999999999885333 4789999999998852
Q ss_pred HHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCC
Q 002230 607 AAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDN 686 (950)
Q Consensus 607 ~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~ 686 (950)
+.+..+.++.+|+|++++|++ .+++|+++++|++|++++++|+.|+++|++++|+|||+
T Consensus 315 -----~~~~~~~~~~~g~~~~~~a~~----------------~~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~ 373 (499)
T TIGR01494 315 -----LEEKVKELAQSGLRVLAVASK----------------ETLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDN 373 (499)
T ss_pred -----HHHHHHHHHhCCCEEEEEEEC----------------CeEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCC
Confidence 123345678899999999964 26999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhh
Q 002230 687 INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPAL 766 (950)
Q Consensus 687 ~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al 766 (950)
..+|..+|+++|| +++++|+||.++|+.+|+. |+.|+|+|||.||+|||
T Consensus 374 ~~~a~~ia~~lgi------------------------------~~~~~p~~K~~~v~~l~~~-g~~v~~vGDg~nD~~al 422 (499)
T TIGR01494 374 VLTAKAIAKELGI------------------------------FARVTPEEKAALVEALQKK-GRVVAMTGDGVNDAPAL 422 (499)
T ss_pred HHHHHHHHHHcCc------------------------------eeccCHHHHHHHHHHHHHC-CCEEEEECCChhhHHHH
Confidence 9999999999986 4789999999999999988 99999999999999999
Q ss_pred hcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhHH
Q 002230 767 HEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAV 846 (950)
Q Consensus 767 ~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~N~~~~~~~~~~~~~~~~~pl~~~ 846 (950)
++|||||+|| |+++||++++++++..+..++++||+++.++++++.|.++||++.+++++++.+
T Consensus 423 ~~Advgia~~------a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~~~---------- 486 (499)
T TIGR01494 423 KKADVGIAMG------AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAALLAV---------- 486 (499)
T ss_pred HhCCCccccc------hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------
Confidence 9999999997 689999999999999999999999999999999999999999998888876431
Q ss_pred HHHHHHHHHHHHHHHH
Q 002230 847 QLLWVNMIMDTLGALA 862 (950)
Q Consensus 847 qll~~nli~d~l~~la 862 (950)
+|+++++.++++
T Consensus 487 ----~~~~~~~~~~~~ 498 (499)
T TIGR01494 487 ----LNLVPPGLAALA 498 (499)
T ss_pred ----HHHHhcchhhhc
Confidence 788888877654
No 28
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=5.5e-75 Score=688.91 Aligned_cols=530 Identities=27% Similarity=0.391 Sum_probs=421.7
Q ss_pred CccHHHHHHHHHhhHHHHH--HHHHHH-HHHHhhc---cc-----cCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHH-
Q 002230 160 ARGFWVYVWEALHDMTLMI--LAVCAL-VSLVVGI---AT-----EGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQ- 227 (950)
Q Consensus 160 ~~~f~~~~~~~~~~~~~~i--l~i~a~-~s~~~~~---~~-----~~~~~~~~d~~~i~~~illv~~v~~~~~~~~~~~- 227 (950)
+.+|++..|+.++.....+ |+..++ .+++++. .. .+..++||++.++++.++++ ++|.+++.
T Consensus 2 g~~~~~~a~~~l~~~~~~md~l~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~------g~~le~~~~ 75 (562)
T TIGR01511 2 GRPFYKSAWKALRHKAPNMDTLIALGTTVAYGYSLVALLANQVLTGLHVHTFFDASAMLITFILL------GRWLEMLAK 75 (562)
T ss_pred cHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHH------HHHHHHHHH
Confidence 4688899999887544322 222222 2222221 11 11235788887766554443 44444433
Q ss_pred ------HHHhHhhhcCCeEEEEeC-CeEEEEecCCcCCCcEEEeCCCCeecccEEEEeecceEEEcccccCCCCcccccC
Q 002230 228 ------FKDLDREKKKITVQVARN-GFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300 (950)
Q Consensus 228 ------~~~l~~~~~~~~v~V~R~-g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g~~l~VDeS~LTGEs~pv~k~~ 300 (950)
.++|.+ ..+.+++|+|+ |.+++|++++|+|||+|.|++||+|||||++++|+. .||||+|||||.|+.|..
T Consensus 76 ~~a~~~~~~L~~-~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~g~~-~vdes~lTGEs~pv~k~~ 153 (562)
T TIGR01511 76 GRASDALSKLAK-LQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIEGES-EVDESLVTGESLPVPKKV 153 (562)
T ss_pred HHHHHHHHHHHh-cCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEECce-EEehHhhcCCCCcEEcCC
Confidence 233332 34568888885 677999999999999999999999999999999985 999999999999999998
Q ss_pred CCCeEEeccEEeeceEEEEEEEEeeccchhhHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 002230 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRK 380 (950)
Q Consensus 301 ~~~~l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~ 380 (950)
++. +|+||.+.+|+++++|+++|.+|.+|++.+++.+++.+++|+|+.++++++++.+++++++++++++|.
T Consensus 154 gd~-V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~------- 225 (562)
T TIGR01511 154 GDP-VIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWL------- 225 (562)
T ss_pred CCE-EEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH-------
Confidence 775 999999999999999999999999999999999999999999999999999999999988888877652
Q ss_pred ccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEeeCCccc
Q 002230 381 LQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGT 460 (950)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~lav~l~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGT 460 (950)
..+..++++++++|||+|++++|+++..++.+++++|+++|+.+++|+|+++|+||||||||
T Consensus 226 ------------------~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGT 287 (562)
T TIGR01511 226 ------------------FALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGT 287 (562)
T ss_pred ------------------HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEECCCCC
Confidence 24667899999999999999999999999999999999999999999999999999999999
Q ss_pred cccCceEEEEEEEcceeeeccCCCCCCCCCCCCChHHHHHHHHHHHhcCCCceeecCCCceeecCChhhhHHHHHHHHcC
Q 002230 461 LTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540 (950)
Q Consensus 461 LT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g 540 (950)
||+|+|+|.++...+... .++.+.+ +... + ..+.||.++|+++++.+.+
T Consensus 288 LT~g~~~v~~i~~~~~~~---------------~~~~l~~---aa~~------e-------~~s~HPia~Ai~~~~~~~~ 336 (562)
T TIGR01511 288 LTQGKPTVTDVHVFGDRD---------------RTELLAL---AAAL------E-------AGSEHPLAKAIVSYAKEKG 336 (562)
T ss_pred CcCCCEEEEEEecCCCCC---------------HHHHHHH---HHHH------h-------ccCCChHHHHHHHHHHhcC
Confidence 999999999886543210 1122222 1111 1 1257999999999998766
Q ss_pred CChHHHhhhcceEEEecCCCCCceEEEEEEcCCCcEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHH
Q 002230 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFA 620 (950)
Q Consensus 541 ~~~~~~~~~~~i~~~~pF~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a 620 (950)
.+... .+-.+.+| . .++.....+.. +..|+++.+.+ ++. .++ ++.
T Consensus 337 ~~~~~----~~~~~~~~----g--~Gi~~~~~g~~---~~iG~~~~~~~--------~~~--~~~------------~~~ 381 (562)
T TIGR01511 337 ITLVE----VSDFKAIP----G--IGVEGTVEGTK---IQLGNEKLLGE--------NAI--KID------------GKA 381 (562)
T ss_pred CCcCC----CCCeEEEC----C--ceEEEEECCEE---EEEECHHHHHh--------CCC--CCC------------hhh
Confidence 43211 01111111 1 12222222222 33477665432 111 111 134
Q ss_pred hcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 002230 621 SEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (950)
Q Consensus 621 ~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~ 700 (950)
++|.+++.++ .|.+++|++.++|++||+++++|++|++.|++++|+|||+..++.++++++||.
T Consensus 382 ~~g~~~~~~~----------------~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~ 445 (562)
T TIGR01511 382 EQGSTSVLVA----------------VNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN 445 (562)
T ss_pred hCCCEEEEEE----------------ECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc
Confidence 6788888776 567899999999999999999999999999999999999999999999999993
Q ss_pred cCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCc
Q 002230 701 TDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780 (950)
Q Consensus 701 ~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~ 780 (950)
++++..|++|.++++.++++ ++.|+|+|||.||+||+++||+||+|| .|+
T Consensus 446 ----------------------------~~~~~~p~~K~~~v~~l~~~-~~~v~~VGDg~nD~~al~~A~vgia~g-~g~ 495 (562)
T TIGR01511 446 ----------------------------VRAEVLPDDKAALIKELQEK-GRVVAMVGDGINDAPALAQADVGIAIG-AGT 495 (562)
T ss_pred ----------------------------EEccCChHHHHHHHHHHHHc-CCEEEEEeCCCccHHHHhhCCEEEEeC-CcC
Confidence 77888999999999999988 999999999999999999999999999 899
Q ss_pred HHHHhcCCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002230 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSA 835 (950)
Q Consensus 781 ~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~N~~~~~~~~~~~ 835 (950)
+.++++||++++++++..+.+++++||+++++|++|+.|++.||++.+++++.+.
T Consensus 496 ~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~~i~la~~~~ 550 (562)
T TIGR01511 496 DVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIPIAAGVL 550 (562)
T ss_pred HHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999999988887443
No 29
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=4.6e-75 Score=691.90 Aligned_cols=512 Identities=28% Similarity=0.382 Sum_probs=424.7
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcCCeEEEEeCC-eEEEEecCCcCCCcEEEeCCCCeecccEEEEe
Q 002230 200 AHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNG-FRRKISIYDLLPGDIVHLCMGDQVPADGLFVS 278 (950)
Q Consensus 200 ~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g-~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~ 278 (950)
|.++..+++.+++.-++....+++.++..+++.+ .++..++|+|+| ++++|+++||+|||+|.+++||+|||||++++
T Consensus 18 ~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~-~~~~~~~v~r~~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi~ 96 (556)
T TIGR01525 18 VLEGALLLFLFLLGETLEERAKGRASDALSALLA-LAPSTARVLQGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVIS 96 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEeccceEEEe
Confidence 5666666655555555555555555555555554 455689999995 99999999999999999999999999999999
Q ss_pred ecceEEEcccccCCCCcccccCCCCeEEeccEEeeceEEEEEEEEeeccchhhHhhhhcCCCCCCChhHHHHHHHHHHHH
Q 002230 279 GFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIG 358 (950)
Q Consensus 279 g~~l~VDeS~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~ 358 (950)
|+ +.||||+|||||.|+.|.+++ .+|+||.+.+|+++++|+++|.+|++|++.+.+.+...+++|+|+.+++++.++.
T Consensus 97 g~-~~vdes~lTGEs~pv~k~~g~-~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~ 174 (556)
T TIGR01525 97 GE-SEVDESALTGESMPVEKKEGD-EVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEAQSSKAPIQRLADRIASYYV 174 (556)
T ss_pred cc-eEEeehhccCCCCCEecCCcC-EEeeceEECCceEEEEEEEecccCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHH
Confidence 97 599999999999999998876 5999999999999999999999999999999999888888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhcccccc
Q 002230 359 KIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALV 438 (950)
Q Consensus 359 ~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~lav~l~l~~~~~~~~~~~ilv 438 (950)
++++++++++|++|+.... . ..+..++++++++|||+||+++|++++.++++|.++|+++
T Consensus 175 ~~~l~~a~~~~~~~~~~~~------------------~--~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gilv 234 (556)
T TIGR01525 175 PAVLAIALLTFVVWLALGA------------------L--GALYRALAVLVVACPCALGLATPVAILVAIGVAARRGILI 234 (556)
T ss_pred HHHHHHHHHHHHHHHHhcc------------------c--hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCcee
Confidence 9999999988887643210 0 4577889999999999999999999999999999999999
Q ss_pred ccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeeeccCCCCCCCCCCCCChHHHHHHHHHHHhcCCCceeecCC
Q 002230 439 RHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEG 518 (950)
Q Consensus 439 r~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~ 518 (950)
|+++++|+||++|++|||||||||+|+|+|.++...++.. ...++.+.+ +.. .+
T Consensus 235 k~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~-------------~~~~~~l~~---a~~------~e---- 288 (556)
T TIGR01525 235 KGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDAS-------------ISEEELLAL---AAA------LE---- 288 (556)
T ss_pred cCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCC-------------ccHHHHHHH---HHH------Hh----
Confidence 9999999999999999999999999999999987543221 001122221 111 11
Q ss_pred CceeecCChhhhHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEcCCCcEEEEEcCchHHHHHhccccccCC
Q 002230 519 NKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSN 598 (950)
Q Consensus 519 ~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~pF~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~ 598 (950)
..+.||+++|+++++.+.+.+... +| + +...++.++..++||+++..+..|+.. ..+
T Consensus 289 ---~~~~hp~~~Ai~~~~~~~~~~~~~-----------~~--~------~~~~~~~gi~~~~~g~~~~~lg~~~~~-~~~ 345 (556)
T TIGR01525 289 ---QSSSHPLARAIVRYAKKRGLELPK-----------QE--D------VEEVPGKGVEATVDGQEEVRIGNPRLL-ELA 345 (556)
T ss_pred ---ccCCChHHHHHHHHHHhcCCCccc-----------cc--C------eeEecCCeEEEEECCeeEEEEecHHHH-hhc
Confidence 126799999999999877654221 11 0 011234456666666656666666432 111
Q ss_pred CeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeeccCCCCccHHHHHHHHHHCC-C
Q 002230 599 GEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAG-I 677 (950)
Q Consensus 599 g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~aG-i 677 (950)
+.. ...+++.++.++.+|+|++.++ .|.+++|.+.++|++|||++++++.|+++| +
T Consensus 346 ~~~-------~~~~~~~~~~~~~~g~~~~~v~----------------~~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i 402 (556)
T TIGR01525 346 AEP-------ISASPDLLNEGESQGKTVVFVA----------------VDGELLGVIALRDQLRPEAKEAIAALKRAGGI 402 (556)
T ss_pred CCC-------chhhHHHHHHHhhCCcEEEEEE----------------ECCEEEEEEEecccchHhHHHHHHHHHHcCCC
Confidence 111 1122345667889999999988 356899999999999999999999999999 9
Q ss_pred EEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHHHHHhhhCCCEEEEEc
Q 002230 678 TVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTG 757 (950)
Q Consensus 678 ~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vG 757 (950)
+++|+|||+..++.++++++|+.. +|+++.|++|..+++.+++. ++.|+|+|
T Consensus 403 ~v~ivTgd~~~~a~~i~~~lgi~~---------------------------~f~~~~p~~K~~~v~~l~~~-~~~v~~vG 454 (556)
T TIGR01525 403 KLVMLTGDNRSAAEAVAAELGIDE---------------------------VHAELLPEDKLAIVKELQEE-GGVVAMVG 454 (556)
T ss_pred eEEEEeCCCHHHHHHHHHHhCCCe---------------------------eeccCCHHHHHHHHHHHHHc-CCEEEEEE
Confidence 999999999999999999999964 89999999999999999988 89999999
Q ss_pred CCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002230 758 DGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSA 835 (950)
Q Consensus 758 DG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~N~~~~~~~~~~~ 835 (950)
||.||++|+++||+|++|| ++++.+++.||+++.++++..+.+++++||+++.||++++.|+++||++++++++.+.
T Consensus 455 Dg~nD~~al~~A~vgia~g-~~~~~~~~~Ad~vi~~~~~~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~~g~ 531 (556)
T TIGR01525 455 DGINDAPALAAADVGIAMG-AGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGGL 531 (556)
T ss_pred CChhHHHHHhhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999 8999999999999999999999999999999999999999999999999998887543
No 30
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=2.9e-74 Score=714.46 Aligned_cols=654 Identities=22% Similarity=0.278 Sum_probs=479.8
Q ss_pred hhccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccChhhhh--hh--hcc---CChHH
Q 002230 42 TANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELG--SI--VEG---HDIKK 114 (950)
Q Consensus 42 ~~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~--~~~---~~~~~ 114 (950)
+..|....|+...+.+++..+++++.+.+..+.. ......+.+.++..||.+.+.+.. .. .++ ++.+.
T Consensus 110 Ca~Ca~~Ie~~L~~~~GV~~a~vnl~t~~~~V~~-----~~s~~~I~~~I~~~Gy~a~~~~~~~~~~~~~~~~~~~~~~~ 184 (834)
T PRK10671 110 CASCVSRVQNALQSVPGVTQARVNLAERTALVMG-----SASPQDLVQAVEKAGYGAEAIEDDAKRRERQQETAQATMKR 184 (834)
T ss_pred cHHHHHHHHHHHhcCCCceeeeeecCCCeEEEEc-----cCCHHHHHHHHHhcCCCccccccccchhhhhhhhhHHHHHH
Confidence 4567777888888888888888888777655542 122234445567788876542211 00 000 11112
Q ss_pred HHHhcCHHHHHH----HhCCCc-cCCCChhHHHHHHHHhhc-CCCccCCCCCccHHHHHHHHHhhHHHH--HHHHHHH-H
Q 002230 115 LKVHGGVEGIAE----KLSTSI-TDGISTSEHLLNRRKEIY-GINKFTESPARGFWVYVWEALHDMTLM--ILAVCAL-V 185 (950)
Q Consensus 115 l~~~~~v~~l~~----~l~~~~-~~Gl~~~~~~~~~r~~~~-G~N~~~~~~~~~f~~~~~~~~~~~~~~--il~i~a~-~ 185 (950)
+.....+..+.. .+..-. ..-+.... ...+...+ -.-......+.+|++..|+++++.... .|+.+++ .
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~a~~~l~~~~~~md~l~~l~~~~ 262 (834)
T PRK10671 185 FRWQAIVALAVGIPVMVWGMIGDNMMVTADN--RSLWLVIGLITLAVMVFAGGHFYRSAWKSLLNGSATMDTLVALGTGA 262 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcccCccc--hhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHH
Confidence 222222333221 111000 00011100 00010000 000000123668888889888754322 2222222 2
Q ss_pred HHHhhc----c----ccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh------hhcCCeEEEEeCCeEEEE
Q 002230 186 SLVVGI----A----TEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR------EKKKITVQVARNGFRRKI 251 (950)
Q Consensus 186 s~~~~~----~----~~~~~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~------~~~~~~v~V~R~g~~~~I 251 (950)
++++++ . ..+..+.|||..++++.++++ ++|.|++..++..+ ...+..++|+|+|++++|
T Consensus 263 a~~~s~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~------g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v 336 (834)
T PRK10671 263 AWLYSMSVNLWPQWFPMEARHLYYEASAMIIGLINL------GHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSV 336 (834)
T ss_pred HHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEE
Confidence 222221 1 111123488876655544333 56666655443322 245678999999999999
Q ss_pred ecCCcCCCcEEEeCCCCeecccEEEEeecceEEEcccccCCCCcccccCCCCeEEeccEEeeceEEEEEEEEeeccchhh
Q 002230 252 SIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGK 331 (950)
Q Consensus 252 ~~~dLvvGDiV~l~~Gd~vPaDgill~g~~l~VDeS~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~~V~~~G~~T~~g~ 331 (950)
+.++|+|||+|.|++||+|||||++++|+ ..||||+|||||.|+.|..++. +|+||.+.+|.++++|+++|.+|.+|+
T Consensus 337 ~~~~l~~GD~v~v~~G~~iP~Dg~v~~g~-~~vdeS~lTGEs~pv~k~~gd~-V~aGt~~~~G~~~~~v~~~g~~t~l~~ 414 (834)
T PRK10671 337 PLADVQPGMLLRLTTGDRVPVDGEITQGE-AWLDEAMLTGEPIPQQKGEGDS-VHAGTVVQDGSVLFRASAVGSHTTLSR 414 (834)
T ss_pred EHHHcCCCCEEEEcCCCEeeeeEEEEEce-EEEeehhhcCCCCCEecCCCCE-EEecceecceeEEEEEEEEcCcChHHH
Confidence 99999999999999999999999999997 5999999999999999998774 999999999999999999999999999
Q ss_pred HhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHH
Q 002230 332 LMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVA 411 (950)
Q Consensus 332 i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvva 411 (950)
|.+++++++..++|+|+..++++.++.+++++++++++++|+.. +. ...+...+..++++++++
T Consensus 415 i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~--------~~--------~~~~~~~~~~a~~vlv~a 478 (834)
T PRK10671 415 IIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFF--------GP--------APQIVYTLVIATTVLIIA 478 (834)
T ss_pred HHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------CC--------chHHHHHHHHHHHHHHHh
Confidence 99999998888999999999999999999999999888876431 00 012445677899999999
Q ss_pred hcCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeeeccCCCCCCCCCC
Q 002230 412 VPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGS 491 (950)
Q Consensus 412 vP~~L~lav~l~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 491 (950)
|||+|++++|+++..++.+++++|+++|+++++|+|+++|++|||||||||+|+|+|.+++..+..
T Consensus 479 cPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~-------------- 544 (834)
T PRK10671 479 CPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNGV-------------- 544 (834)
T ss_pred cccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCCC--------------
Confidence 999999999999999999999999999999999999999999999999999999999887643321
Q ss_pred CCChHHHHHHHHHHHhcCCCceeecCCCceeecCChhhhHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEc
Q 002230 492 SIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIEL 571 (950)
Q Consensus 492 ~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~pF~s~~k~msvvv~~ 571 (950)
++ .+++..+...++. +.||.++|+++++...... ...+|+.... .++....
T Consensus 545 --~~--~~~l~~a~~~e~~-------------s~hp~a~Ai~~~~~~~~~~-----------~~~~~~~~~g-~Gv~~~~ 595 (834)
T PRK10671 545 --DE--AQALRLAAALEQG-------------SSHPLARAILDKAGDMTLP-----------QVNGFRTLRG-LGVSGEA 595 (834)
T ss_pred --CH--HHHHHHHHHHhCC-------------CCCHHHHHHHHHHhhCCCC-----------CcccceEecc-eEEEEEE
Confidence 11 1222222222221 6799999999987533211 1122332221 1222222
Q ss_pred CCCcEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEE
Q 002230 572 PEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTC 651 (950)
Q Consensus 572 ~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~ 651 (950)
+ +. .+++|+++.+.... +. ++.+.+.++.++.+|.+++.+++ |..+
T Consensus 596 ~-g~--~~~~G~~~~~~~~~------------~~---~~~~~~~~~~~~~~g~~~v~va~----------------~~~~ 641 (834)
T PRK10671 596 E-GH--ALLLGNQALLNEQQ------------VD---TKALEAEITAQASQGATPVLLAV----------------DGKA 641 (834)
T ss_pred C-CE--EEEEeCHHHHHHcC------------CC---hHHHHHHHHHHHhCCCeEEEEEE----------------CCEE
Confidence 2 22 24569988764321 11 12355667788899999999884 4578
Q ss_pred EeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEe
Q 002230 652 IGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMA 731 (950)
Q Consensus 652 lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~a 731 (950)
+|++++.|++||+++++|++|++.|++++|+|||+..++.++++++||.. +++
T Consensus 642 ~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~---------------------------~~~ 694 (834)
T PRK10671 642 AALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE---------------------------VIA 694 (834)
T ss_pred EEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE---------------------------EEe
Confidence 99999999999999999999999999999999999999999999999964 899
Q ss_pred ecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHHHHHHHH
Q 002230 732 RSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYI 811 (950)
Q Consensus 732 r~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~ 811 (950)
+..|++|.++++.++.+ ++.|+|+|||.||+||+++||+||+|| +|++.++++||++++++++..|.+++++||+++.
T Consensus 695 ~~~p~~K~~~i~~l~~~-~~~v~~vGDg~nD~~al~~Agvgia~g-~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~ 772 (834)
T PRK10671 695 GVLPDGKAEAIKRLQSQ-GRQVAMVGDGINDAPALAQADVGIAMG-GGSDVAIETAAITLMRHSLMGVADALAISRATLR 772 (834)
T ss_pred CCCHHHHHHHHHHHhhc-CCEEEEEeCCHHHHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHH
Confidence 99999999999999988 999999999999999999999999999 8999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 002230 812 NIQKFVQFQLTVNVVALIVNF 832 (950)
Q Consensus 812 ~i~k~i~~~l~~N~~~~~~~~ 832 (950)
+|++|+.|++.||++++++++
T Consensus 773 ~i~~Nl~~a~~yn~~~i~~a~ 793 (834)
T PRK10671 773 NMKQNLLGAFIYNSLGIPIAA 793 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999876
No 31
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=1.2e-73 Score=675.43 Aligned_cols=502 Identities=27% Similarity=0.359 Sum_probs=414.6
Q ss_pred HHHHHHHHHHhhccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcCCeEEEEeCCeEEEEecCCcCC
Q 002230 179 LAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLP 258 (950)
Q Consensus 179 l~i~a~~s~~~~~~~~~~~~~~~d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvv 258 (950)
+.++++++++.+ .|+|+..+++.+++..++....+++.++..+++.+ ..+.+++|+|||++++|++++|+|
T Consensus 5 ~~~a~~~~~~~~--------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~-~~~~~~~v~r~g~~~~i~~~~l~~ 75 (536)
T TIGR01512 5 MALAALGAVAIG--------EYLEGALLLLLFSIGETLEEYASGRARRALKALME-LAPDTARVLRGGSLEEVAVEELKV 75 (536)
T ss_pred HHHHHHHHHHHh--------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCEEEEEECCEEEEEEHHHCCC
Confidence 445555666554 48898776666656555555555555555555554 456789999999999999999999
Q ss_pred CcEEEeCCCCeecccEEEEeecceEEEcccccCCCCcccccCCCCeEEeccEEeeceEEEEEEEEeeccchhhHhhhhcC
Q 002230 259 GDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSE 338 (950)
Q Consensus 259 GDiV~l~~Gd~vPaDgill~g~~l~VDeS~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~~~ 338 (950)
||+|.+++||+|||||++++|+ +.||||+|||||.|+.|..++ .+|+||.+.+|+++++|++||.+|.+|++.+++.+
T Consensus 76 GDiv~v~~G~~iP~Dg~ii~g~-~~vdes~lTGEs~pv~k~~g~-~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~ 153 (536)
T TIGR01512 76 GDVVVVKPGERVPVDGVVLSGT-STVDESALTGESVPVEKAPGD-EVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEE 153 (536)
T ss_pred CCEEEEcCCCEeecceEEEeCc-EEEEecccCCCCCcEEeCCCC-EEEeeeEECCceEEEEEEEeccccHHHHHHHHHHH
Confidence 9999999999999999999997 599999999999999998876 59999999999999999999999999999999998
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHH
Q 002230 339 GGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPL 418 (950)
Q Consensus 339 ~~~~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~l 418 (950)
...+++|+|+.+++++.++.+++++++++++++|... . . + . ..+..++++++++|||+||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~----~------~--~~~~~~~svlv~~~P~aL~l 214 (536)
T TIGR01512 154 AQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLL---K----R----W------P--FWVYRALVLLVVASPCALVI 214 (536)
T ss_pred HhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---c----c----c------H--HHHHHHHHHHhhcCcccccc
Confidence 8888899999999999999999988888777765321 0 0 0 1 15777899999999999999
Q ss_pred HHHHHHHHHHHHHhccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeeeccCCCCCCCCCCCCChHHH
Q 002230 419 AVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASAS 498 (950)
Q Consensus 419 av~l~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (950)
++|+++..++++|.++|+++|+++++|++|+++++|||||||||+|+|+|.+++.. +.+
T Consensus 215 a~~~~~~~~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~---------------------~~l 273 (536)
T TIGR01512 215 SAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA---------------------EVL 273 (536)
T ss_pred chHHHHHHHHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH---------------------HHH
Confidence 99999999999999999999999999999999999999999999999999876421 122
Q ss_pred HHHHHHHHhcCCCceeecCCCceeecCChhhhHHHHHHHHcCCChHHHhhhcceEEEecCCCCCce--EEEEEEcCCCcE
Q 002230 499 KLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQ--MGVVIELPEGGF 576 (950)
Q Consensus 499 ~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~pF~s~~k~--msvvv~~~~~~~ 576 (950)
.. +... + ..+.||.++|+++++.+.+ ||++.+.. .++.....+..+
T Consensus 274 ~~---a~~~------e-------~~~~hp~~~Ai~~~~~~~~----------------~~~~~~~~~g~gi~~~~~g~~~ 321 (536)
T TIGR01512 274 RL---AAAA------E-------QASSHPLARAIVDYARKRE----------------NVESVEEVPGEGVRAVVDGGEV 321 (536)
T ss_pred HH---HHHH------h-------ccCCCcHHHHHHHHHHhcC----------------CCcceEEecCCeEEEEECCeEE
Confidence 21 1111 1 1267999999999987653 22222211 122222222222
Q ss_pred EEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeee
Q 002230 577 RVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVG 656 (950)
Q Consensus 577 ~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~ 656 (950)
..|+++.+.+. + ...+..+|.+++.++ .|..++|.+.
T Consensus 322 ---~ig~~~~~~~~--------~----------------~~~~~~~~~~~~~v~----------------~~~~~~g~i~ 358 (536)
T TIGR01512 322 ---RIGNPRSLEAA--------V----------------GARPESAGKTIVHVA----------------RDGTYLGYIL 358 (536)
T ss_pred ---EEcCHHHHhhc--------C----------------CcchhhCCCeEEEEE----------------ECCEEEEEEE
Confidence 23666543221 1 013455677776665 4678999999
Q ss_pred ccCCCCccHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecCh
Q 002230 657 IKDPMRPGVKESVAICRSAGI-TVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (950)
Q Consensus 657 i~D~lr~~~~~~I~~l~~aGi-~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P 735 (950)
++|++||+++++|++|+++|+ ++.|+|||+..++.++++++||.. +|++..|
T Consensus 359 ~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~---------------------------~f~~~~p 411 (536)
T TIGR01512 359 LSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE---------------------------VHAELLP 411 (536)
T ss_pred EeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh---------------------------hhhccCc
Confidence 999999999999999999999 999999999999999999999964 7889999
Q ss_pred hhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHHHHHHHHHHHH
Q 002230 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQK 815 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k 815 (950)
++|..+++.+++. ++.|+|+|||.||++|+++||+|++||.+|++.++++||++++++++..+.+++++||+++++|++
T Consensus 412 ~~K~~~i~~l~~~-~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~ 490 (536)
T TIGR01512 412 EDKLEIVKELREK-YGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQ 490 (536)
T ss_pred HHHHHHHHHHHhc-CCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988 899999999999999999999999999668999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 002230 816 FVQFQLTVNVVALIVNFSS 834 (950)
Q Consensus 816 ~i~~~l~~N~~~~~~~~~~ 834 (950)
|+.|++.||++++++++++
T Consensus 491 nl~~a~~~n~~~i~~a~~G 509 (536)
T TIGR01512 491 NVVIALGIILLLILLALFG 509 (536)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999999988764
No 32
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.5e-71 Score=620.69 Aligned_cols=740 Identities=23% Similarity=0.299 Sum_probs=525.3
Q ss_pred CCCChhHHHHHHHHhhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhccccCCCCCcchhHHHHHHHHHH
Q 002230 134 DGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLV 213 (950)
Q Consensus 134 ~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~il~i~a~~s~~~~~~~~~~~~~~~d~~~i~~~illv 213 (950)
.|.. ++.++..-...||.|.+..+ .++|-.++.+.-..|+..+...|..+ |-.. +.||.+... +++.
T Consensus 161 ~G~~-~~~~i~~a~~~~G~N~fdi~-vPtF~eLFkE~A~aPfFVFQVFcvgL----WCLD----eyWYySlFt---LfMl 227 (1160)
T KOG0209|consen 161 TGHE-EESEIKLAKHKYGKNKFDIV-VPTFSELFKEHAVAPFFVFQVFCVGL----WCLD----EYWYYSLFT---LFML 227 (1160)
T ss_pred cCcc-hHHHHHHHHHHhcCCccccC-CccHHHHHHHhccCceeeHhHHhHHH----HHhH----HHHHHHHHH---HHHH
Confidence 5777 44457777777999999654 56788888888777776655555444 3322 357776433 3333
Q ss_pred HHHHHHHHHHHHHHHHHhHhh-hcCCeEEEEeCCeEEEEecCCcCCCcEEEeCC---CCeecccEEEEeecceEEEcccc
Q 002230 214 VFVTATSDYKQSLQFKDLDRE-KKKITVQVARNGFRRKISIYDLLPGDIVHLCM---GDQVPADGLFVSGFSVLINESSL 289 (950)
Q Consensus 214 ~~v~~~~~~~~~~~~~~l~~~-~~~~~v~V~R~g~~~~I~~~dLvvGDiV~l~~---Gd~vPaDgill~g~~l~VDeS~L 289 (950)
+.+.+.--+++.+......+. ..+..+.|+|+++|+.+.++||.|||+|.+.. ...||||.+|+.|+ |.|||++|
T Consensus 228 i~fE~tlV~Qrm~~lse~R~Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~Gs-ciVnEaML 306 (1160)
T KOG0209|consen 228 IAFEATLVKQRMRTLSEFRTMGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRGS-CIVNEAML 306 (1160)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEecc-eeechhhh
Confidence 444444444444444444442 34568999999999999999999999999988 45899999999996 79999999
Q ss_pred cCCCCcccccC----------------CCCeEEeccEEe-------------eceEEEEEEEEeeccchhhHhhhhcCCC
Q 002230 290 TGESEPVNVNA----------------LNPFLLSGTKVQ-------------NGSCKMLVTTVGMRTQWGKLMATLSEGG 340 (950)
Q Consensus 290 TGEs~pv~k~~----------------~~~~l~sGt~v~-------------~G~~~~~V~~~G~~T~~g~i~~~~~~~~ 340 (950)
||||.|..|.+ +..++|.||+++ +|.+.+.|++||.+|..|++++.+....
T Consensus 307 tGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf~a 386 (1160)
T KOG0209|consen 307 TGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTILFSA 386 (1160)
T ss_pred cCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCceeeeEEecc
Confidence 99999999841 345799999996 5789999999999999999999887755
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHHHH
Q 002230 341 DDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420 (950)
Q Consensus 341 ~~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~lav 420 (950)
++-|.-. +-+.++ ++.+++|.+....|.+....... ..+=...|.-++.|+...+|.-||+-+
T Consensus 387 ervTaNn----~Etf~F-----ILFLlVFAiaAa~Yvwv~Gskd~--------~RsrYKL~LeC~LIlTSVvPpELPmEL 449 (1160)
T KOG0209|consen 387 ERVTANN----RETFIF-----ILFLLVFAIAAAGYVWVEGSKDP--------TRSRYKLFLECTLILTSVVPPELPMEL 449 (1160)
T ss_pred eeeeecc----HHHHHH-----HHHHHHHHHHhhheEEEecccCc--------chhhhheeeeeeEEEeccCCCCCchhh
Confidence 5433221 112222 33334444444444332211110 011224455566777888999999999
Q ss_pred HHHHHHHHHHHhccccccccchhhhccCCeeEEeeCCccccccCceEEEEEEEcceeeeccCCCCCCCCCCCCChHHHHH
Q 002230 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKL 500 (950)
Q Consensus 421 ~l~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (950)
+++.-.+...+.|.+++|..+=.+.-.|++|.-|||||||||+..|.|..+.-.... .......+..+.+...
T Consensus 450 SmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~------~~~~~~~s~~p~~t~~- 522 (1160)
T KOG0209|consen 450 SMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSAD------EGALTPASKAPNETVL- 522 (1160)
T ss_pred hHHHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCC------cccccchhhCCchHHH-
Confidence 999999999999999999999999999999999999999999999999886532211 0001112222333333
Q ss_pred HHHHHHhcCCCceeecCCCceeecCChhhhHHHHHHHH-cC-CCh----HHHhhhcceEEEecCCCCCceEEEEEEcCC-
Q 002230 501 LLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLL-LG-GDF----QAERQASKIVKVEPFNSVKKQMGVVIELPE- 573 (950)
Q Consensus 501 l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~-~g-~~~----~~~~~~~~i~~~~pF~s~~k~msvvv~~~~- 573 (950)
.++.||+-....+ ...|+|.|+|.+++... .. .+. +..-+..+|.+.+.|+|.-|||+|+....+
T Consensus 523 ---vlAscHsLv~le~-----~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~ 594 (1160)
T KOG0209|consen 523 ---VLASCHSLVLLED-----KLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGP 594 (1160)
T ss_pred ---HHHHHHHHHHhcC-----cccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccC
Confidence 3344443322221 26899999999987621 10 010 011125778999999999999999987543
Q ss_pred ---CcEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCC-----CCCCCCC
Q 002230 574 ---GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF-----SADAPIP 645 (950)
Q Consensus 574 ---~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~-----~~~~~~~ 645 (950)
.++.+.+|||||.|..+-.. ..+.+++...+|+.+|.||||++||.+..-. +-+++.+
T Consensus 595 g~s~k~~~aVKGAPEvi~~ml~d--------------vP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~v 660 (1160)
T KOG0209|consen 595 GSSEKYFVAVKGAPEVIQEMLRD--------------VPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDV 660 (1160)
T ss_pred CCceEEEEEecCCHHHHHHHHHh--------------CchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhh
Confidence 35788899999999876542 2345778889999999999999999997431 2345778
Q ss_pred CCceEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc---------------------
Q 002230 646 TEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG--------------------- 704 (950)
Q Consensus 646 e~~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~--------------------- 704 (950)
|++|+|.|.+.|.-|+|+|++++|+.|++.+++++|+||||+.||.++|+++||.....
T Consensus 661 EsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~ 740 (1160)
T KOG0209|consen 661 ESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDG 740 (1160)
T ss_pred hhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCC
Confidence 99999999999999999999999999999999999999999999999999999975311
Q ss_pred --------------------eeeeCcccccCCH-HHHhhhhccccEEeecChhhHHHHHHHHhhhCCCEEEEEcCCccCH
Q 002230 705 --------------------IAIEGPEFREKSD-EELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDA 763 (950)
Q Consensus 705 --------------------~vi~g~~~~~~~~-~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~ 763 (950)
++++|..+..+.. +.+.++++++.||||+.|.||..++..+++. |+.++|+|||+||+
T Consensus 741 t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~-Gy~TLMCGDGTNDV 819 (1160)
T KOG0209|consen 741 TIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKL-GYVTLMCGDGTNDV 819 (1160)
T ss_pred ceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhc-CeEEEEecCCCcch
Confidence 4555666655432 3577888999999999999999999999998 99999999999999
Q ss_pred HhhhcCCcceeecCCCcHHHH-----------------------------------------------------------
Q 002230 764 PALHEADIGLAMGIAGTEVAK----------------------------------------------------------- 784 (950)
Q Consensus 764 ~al~~AdvGiamg~~g~~~ak----------------------------------------------------------- 784 (950)
.|||+||||||+= ++++.++
T Consensus 820 GALK~AhVGVALL-~~~~e~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~ 898 (1160)
T KOG0209|consen 820 GALKQAHVGVALL-NNPEESKKDKEKRRKKKLKLEPAKQTIAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEED 898 (1160)
T ss_pred hhhhhcccceehh-cCChhhhhHHhhhhhhccccCchhhHHHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhc
Confidence 9999999999985 3332000
Q ss_pred ------------hcCCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhHHHHHHHH
Q 002230 785 ------------ESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVN 852 (950)
Q Consensus 785 ------------~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~N~~~~~~~~~~~~~~~~~pl~~~qll~~n 852 (950)
-||.+.-...+.+++.+.|+.||++.-+.-|.... |.-|....... .+.++.-..-+...|...-.
T Consensus 899 ~~~p~vKLGDASiAAPFTsK~asv~~v~~IIrQGRctLVtTlQMfKI-LALN~LisAYs-lSvlyldGVKfgD~QaTisG 976 (1160)
T KOG0209|consen 899 KGDPLVKLGDASIAAPFTSKLASVSSVTHIIRQGRCTLVTTLQMFKI-LALNCLISAYS-LSVLYLDGVKFGDTQATISG 976 (1160)
T ss_pred ccCccccccccccccccccccchHHHHHHHHHhcchhHHHHHHHHHH-HHHHHHHHHHH-HHHhhhcCceecchhHhHHH
Confidence 01122222225778899999999999876665543 33444322211 23444556778888877666
Q ss_pred HHHHHHHHHHhccCCCCccccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhcccc----c--ccCCCCccccc
Q 002230 853 MIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKAV----F--RLDGPDPDLIL 926 (950)
Q Consensus 853 li~d~l~~lal~~e~p~~~l~~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~l~~~~~~~----~--~~~~~~~~~~~ 926 (950)
+++. ...+.+.-.+|-+.|.+..|. .+++|...+..+++|...++..++++.-..... - +++..-.+...
T Consensus 977 lLla-~cFlfISrskPLetLSkeRP~---~nIFN~Y~i~svl~QFaVH~~tLvYi~~~a~~~~p~~~~vdl~~~F~Psll 1052 (1160)
T KOG0209|consen 977 LLLA-ACFLFISRSKPLETLSKERPL---PNIFNVYIILSVLLQFAVHIATLVYITGEAYKLEPPEEKVDLEEKFSPSLL 1052 (1160)
T ss_pred HHHH-HHHhheecCCchhhHhhcCCC---CCcchHHHHHHHHHHHHHHHHHhhhhHHHHHhcCCcccccChhcccChhhh
Confidence 6553 345666678899999888884 578888888888888888877776654322110 0 11111123445
Q ss_pred chHHhHHHHHHHHHH
Q 002230 927 NTLIFNTFVFCQVCL 941 (950)
Q Consensus 927 ~t~~F~~~v~~q~~n 941 (950)
+|.+|..-...|+..
T Consensus 1053 Nt~vyiisl~~QvsT 1067 (1160)
T KOG0209|consen 1053 NTTVYIISLAQQVST 1067 (1160)
T ss_pred hhHHHHHHHHHHHHH
Confidence 777777666667643
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-59 Score=504.75 Aligned_cols=483 Identities=28% Similarity=0.411 Sum_probs=379.8
Q ss_pred HHHHHHHHHHHHHhHhhhcCCeEEEEeC-CeEEEEecCCcCCCcEEEeCCCCeecccEEEEeecceEEEcccccCCCCcc
Q 002230 218 ATSDYKQSLQFKDLDREKKKITVQVARN-GFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPV 296 (950)
Q Consensus 218 ~~~~~~~~~~~~~l~~~~~~~~v~V~R~-g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g~~l~VDeS~LTGEs~pv 296 (950)
++.+.+-.-|...|.+......++++++ |..+.|++.+|+.||+|.++.||.||+||.+++|.. +||||.+||||.||
T Consensus 84 a~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~a-sVdESAITGESaPV 162 (681)
T COG2216 84 AVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SVDESAITGESAPV 162 (681)
T ss_pred HHHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEeeee-ecchhhccCCCcce
Confidence 3444444445555555445556677775 899999999999999999999999999999999985 99999999999999
Q ss_pred cccCCCCe--EEeccEEeeceEEEEEEEEeeccchhhHhhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002230 297 NVNALNPF--LLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQ 374 (950)
Q Consensus 297 ~k~~~~~~--l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~ 374 (950)
-|..++.+ +-.||.+.+.+.++++++.-.+|.+.|+..+++.++.++||-+--++-+ ..++.+.+++.++.+.
T Consensus 163 iresGgD~ssVtGgT~v~SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iL-----L~~LTliFL~~~~Tl~ 237 (681)
T COG2216 163 IRESGGDFSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTIL-----LSGLTLIFLLAVATLY 237 (681)
T ss_pred eeccCCCcccccCCcEEeeeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHH-----HHHHHHHHHHHHHhhh
Confidence 99877432 8899999999999999999999999999999999999999977555433 2222222221111111
Q ss_pred HHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeeEEe
Q 002230 375 GLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSIC 454 (950)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~lav~l~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~ 454 (950)
.+ ..+..+. . -.+...++++|..+|-.+.-.++.-=..+|.|+.+.|++.++..++|..|.+|++.
T Consensus 238 p~--a~y~~g~-------~-----~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtli 303 (681)
T COG2216 238 PF--AIYSGGG-------A-----ASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLL 303 (681)
T ss_pred hH--HHHcCCC-------C-----cCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEE
Confidence 11 1111010 0 11344577788889987776666555678999999999999999999999999999
Q ss_pred eCCccccccCceEEEEEEEcceeeeccCCCCCCCCCCCCChHHHHHHHHHHHhcCCCceeecCCCceeecCChhhhHHHH
Q 002230 455 SDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILE 534 (950)
Q Consensus 455 ~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~ 534 (950)
.|||||+|-|+-.-.+++..+.. + .+-+..+...++ +. -..|.-+.+++
T Consensus 304 LDKTGTIT~GnR~A~~f~p~~gv----------------~---~~~la~aa~lsS---l~---------DeTpEGrSIV~ 352 (681)
T COG2216 304 LDKTGTITLGNRQASEFIPVPGV----------------S---EEELADAAQLAS---LA---------DETPEGRSIVE 352 (681)
T ss_pred ecccCceeecchhhhheecCCCC----------------C---HHHHHHHHHHhh---hc---------cCCCCcccHHH
Confidence 99999999987766666554332 1 111222222222 11 34688899999
Q ss_pred HHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEcCCCcEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHH
Q 002230 535 FGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNE 614 (950)
Q Consensus 535 ~a~~~g~~~~~~~~~~~i~~~~pF~s~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~ 614 (950)
.+++.+.+.+...... .....||+.+.|.+++-. +++ +-.-|||.+.+....+ +.|...| +.++.
T Consensus 353 LA~~~~~~~~~~~~~~-~~~fvpFtA~TRmSGvd~--~~~--~~irKGA~dai~~~v~----~~~g~~p------~~l~~ 417 (681)
T COG2216 353 LAKKLGIELREDDLQS-HAEFVPFTAQTRMSGVDL--PGG--REIRKGAVDAIRRYVR----ERGGHIP------EDLDA 417 (681)
T ss_pred HHHHhccCCCcccccc-cceeeecceecccccccC--CCC--ceeecccHHHHHHHHH----hcCCCCC------HHHHH
Confidence 9999886554332221 346789999888877644 333 4567999999987654 2232222 35777
Q ss_pred HHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH
Q 002230 615 TIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIA 694 (950)
Q Consensus 615 ~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia 694 (950)
..++-++.|-..|+++ .|..++|++.++|-++||.+|-+.+||+.||+++|+||||+.||.+||
T Consensus 418 ~~~~vs~~GGTPL~V~----------------~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA 481 (681)
T COG2216 418 AVDEVSRLGGTPLVVV----------------ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIA 481 (681)
T ss_pred HHHHHHhcCCCceEEE----------------ECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHH
Confidence 8888899999999887 578899999999999999999999999999999999999999999999
Q ss_pred HHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCccee
Q 002230 695 RECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 774 (950)
Q Consensus 695 ~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGia 774 (950)
++.|++. ..|.++|+||.++++.-|.+ |+.|+|||||+||+|||.+||||+|
T Consensus 482 ~EAGVDd---------------------------fiAeatPEdK~~~I~~eQ~~-grlVAMtGDGTNDAPALAqAdVg~A 533 (681)
T COG2216 482 AEAGVDD---------------------------FIAEATPEDKLALIRQEQAE-GRLVAMTGDGTNDAPALAQADVGVA 533 (681)
T ss_pred HHhCchh---------------------------hhhcCChHHHHHHHHHHHhc-CcEEEEcCCCCCcchhhhhcchhhh
Confidence 9999976 88999999999999999999 9999999999999999999999999
Q ss_pred ecCCCcHHHHhcCCEEeccCChhHHHHHHHHHHHHHH
Q 002230 775 MGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYI 811 (950)
Q Consensus 775 mg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~ 811 (950)
|. +||.+|||++.+|=+|.|...+.+.+..|+...-
T Consensus 534 MN-sGTqAAkEAaNMVDLDS~PTKlievV~IGKqlLi 569 (681)
T COG2216 534 MN-SGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLLI 569 (681)
T ss_pred hc-cccHHHHHhhcccccCCCccceehHhhhhhhhee
Confidence 99 9999999999999999999999999999998653
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=100.00 E-value=1.1e-33 Score=300.83 Aligned_cols=224 Identities=33% Similarity=0.534 Sum_probs=185.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHhhhcCCeEEEEeCCeEEEEecCCcCCCcEEEeCCCCeecccEEEEeecceEEEc
Q 002230 207 VMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINE 286 (950)
Q Consensus 207 ~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g~~l~VDe 286 (950)
++.+++..++..+.+++.++..+++.+...+..++|+|||++++++++||+|||+|.|++||++||||++++...+.|||
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~~~vd~ 82 (230)
T PF00122_consen 3 LFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGSAYVDE 82 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSEEEEEC
T ss_pred EEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceecccccccc
Confidence 34445555566666776666666666544444499999999999999999999999999999999999999933589999
Q ss_pred ccccCCCCcccccC----CCCeEEeccEEeeceEEEEEEEEeeccchhhHhhhhcCCCCCCChhHHHHHHHHHHHHHHHH
Q 002230 287 SSLTGESEPVNVNA----LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGL 362 (950)
Q Consensus 287 S~LTGEs~pv~k~~----~~~~l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l 362 (950)
|.+|||+.|+.|.+ .++++|+||.+.+|++.++|++||.+|..|++.+...++..+++++++.+++++.++.++.+
T Consensus 83 s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (230)
T PF00122_consen 83 SALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIIIL 162 (230)
T ss_dssp HHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhccc
Confidence 99999999999981 45689999999999999999999999999999999988888889999999999999998888
Q ss_pred HHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhccccccccch
Q 002230 363 FFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLA 442 (950)
Q Consensus 363 ~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~lav~l~l~~~~~~~~~~~ilvr~~~ 442 (950)
+++++++++++.. .. ..++...+..++++++++|||+||+++++++.+++++|.++|+++|+++
T Consensus 163 ~~~~~~~~~~~~~------~~----------~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~ 226 (230)
T PF00122_consen 163 AIAILVFIIWFFN------DS----------GISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLS 226 (230)
T ss_dssp HHHHHHHHHCHTG------ST----------TCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTT
T ss_pred ccchhhhccceec------cc----------ccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCcc
Confidence 8777766554321 00 0134567788899999999999999999999999999999999999999
Q ss_pred hhhc
Q 002230 443 ACET 446 (950)
Q Consensus 443 ~~E~ 446 (950)
++|+
T Consensus 227 a~E~ 230 (230)
T PF00122_consen 227 ALEA 230 (230)
T ss_dssp HHHH
T ss_pred cccC
Confidence 9995
No 35
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.89 E-value=3e-23 Score=217.90 Aligned_cols=97 Identities=44% Similarity=0.725 Sum_probs=91.2
Q ss_pred ceEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccc
Q 002230 648 GYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKI 727 (950)
Q Consensus 648 ~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~ 727 (950)
+..++|.+.+.|++||+++++|+.|+++|++++|+|||+..++.++++++||...
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~------------------------- 169 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDS------------------------- 169 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSE-------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccccc-------------------------
Confidence 7899999999999999999999999999999999999999999999999999532
Q ss_pred cEEeec--ChhhH--HHHHHHHhhhCCCEEEEEcCCccCHHhhhcCC
Q 002230 728 QVMARS--SPMDK--HTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD 770 (950)
Q Consensus 728 ~v~ar~--~P~~K--~~~V~~l~~~~g~~v~~vGDG~ND~~al~~Ad 770 (950)
.++++. +|++| ..+++.|+.. ++.|+|+|||.||++|+++||
T Consensus 170 ~v~a~~~~kP~~k~~~~~i~~l~~~-~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 170 IVFARVIGKPEPKIFLRIIKELQVK-PGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp EEEESHETTTHHHHHHHHHHHHTCT-GGGEEEEESSGGHHHHHHHSS
T ss_pred cccccccccccchhHHHHHHHHhcC-CCEEEEEccCHHHHHHHHhCc
Confidence 289999 99999 9999999966 668999999999999999997
No 36
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.72 E-value=2.6e-14 Score=159.32 Aligned_cols=289 Identities=14% Similarity=0.186 Sum_probs=212.2
Q ss_pred CchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCC------------------------
Q 002230 582 GASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNE------------------------ 637 (950)
Q Consensus 582 Ga~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~------------------------ 637 (950)
|-...+.+.|+.++|. ....|++...++++.+....-.-.| .|+++|||+..-.
T Consensus 698 g~ad~~~eACTdfWdG-adi~PlSg~dkkkV~DFY~RaclsG-~C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI~T~ 775 (1354)
T KOG4383|consen 698 GFADFFEEACTDFWDG-ADIIPLSGRDKKKVKDFYLRACLSG-HCLAFAYKPCFCALASQLAGKCIELPLNPEHSKIETA 775 (1354)
T ss_pred cHHHHHHHHhhhhcCC-ceeeecCcchHHHHHHHHHHHhhcc-cchheecccHHHHHHHHhCCceEEeccCcccchhhhh
Confidence 5567888999999874 3567999988998888877766666 5999999975310
Q ss_pred ---CC---------C-----CC-----------CCCCCceEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHH
Q 002230 638 ---FS---------A-----DA-----------PIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINT 689 (950)
Q Consensus 638 ---~~---------~-----~~-----------~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~t 689 (950)
+. + ++ ...-.+.+|.|++....+.|++....|+.|.++.|+.+..|-.+...
T Consensus 776 celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELk 855 (1354)
T KOG4383|consen 776 CELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELK 855 (1354)
T ss_pred ccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHH
Confidence 00 0 00 11124567999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCccCCceeeeC------------------------------------cccccCCHH---------------
Q 002230 690 AKAIARECGILTDNGIAIEG------------------------------------PEFREKSDE--------------- 718 (950)
Q Consensus 690 a~~ia~~~gi~~~~~~vi~g------------------------------------~~~~~~~~~--------------- 718 (950)
.+-.|.++||...++..|+- .+...+..|
T Consensus 856 SkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsd 935 (1354)
T KOG4383|consen 856 SKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSD 935 (1354)
T ss_pred HHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccc
Confidence 99999999998765422210 000000000
Q ss_pred -------------------------HHhhhhccccEEeecChhhHHHHHHHHhhhCCCEEEEEcCCccC--HHhhhcCCc
Q 002230 719 -------------------------ELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTND--APALHEADI 771 (950)
Q Consensus 719 -------------------------~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND--~~al~~Adv 771 (950)
+++.+..-+..|..++|+..-++++.+|++ |++++.+|...|- .-.+-+||+
T Consensus 936 i~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIMQE~-GEVtcclGS~aN~rNSciflkadI 1014 (1354)
T KOG4383|consen 936 IAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIMQEN-GEVTCCLGSCANARNSCIFLKADI 1014 (1354)
T ss_pred hhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHHHHc-CcEEEEeccccccccceEEEccce
Confidence 011111122378899999999999999999 9999999999984 335578899
Q ss_pred ceeecCC------------CcHH-HH-----------------hcCCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 002230 772 GLAMGIA------------GTEV-AK-----------------ESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQL 821 (950)
Q Consensus 772 Giamg~~------------g~~~-ak-----------------~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l 821 (950)
+||+..- ++.. .. -++|+.+.....-++.++|+.+|.....+|+.+.|.+
T Consensus 1015 SialD~l~~~~C~~e~fg~assismaqandglsplQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiL 1094 (1354)
T KOG4383|consen 1015 SIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFIL 1094 (1354)
T ss_pred eEEeccCCCccceecccccchhhhhhhhcCCCCceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 9987310 0100 11 2245555444566788899999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCChhHHHHHHHHHHHHHHHHHHhc---cCCCCcccccc
Q 002230 822 TVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALA---TEPPNGDLMKR 875 (950)
Q Consensus 822 ~~N~~~~~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~---~e~p~~~l~~~ 875 (950)
+..+...++.|++.++..+..++..|++|.+.+- .|.+.++ +.+|...+|.+
T Consensus 1095 q~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc--~PlL~i~tL~gk~~hkSii~m 1149 (1354)
T KOG4383|consen 1095 QAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFC--IPLLFIGTLFGKFEHKSIIIM 1149 (1354)
T ss_pred HHHHHHHHHHHHHHHHhccchhccchHHHHHHHH--HHHHHHHHHhcCCCccceEEe
Confidence 9999999999999999988899999999999874 4555555 35555555543
No 37
>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....
Probab=99.65 E-value=1.4e-16 Score=162.97 Aligned_cols=109 Identities=35% Similarity=0.500 Sum_probs=89.4
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhcccccccCC
Q 002230 840 NAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKAVFRLDG 919 (950)
Q Consensus 840 ~~pl~~~qll~~nli~d~l~~lal~~e~p~~~l~~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~ 919 (950)
+.|+++.|+||+|+++|.+|+++++.|||++++|+|||++++++++++.+|+.++.++++++++.++.++.+...++.+.
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~~~~~ 80 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIFGWDE 80 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHSTCSSS
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 57999999999999999999999999999999999999999999999999999999999999999888877665555331
Q ss_pred C---CcccccchHHhHHHHHHHHHHHHhcccC
Q 002230 920 P---DPDLILNTLIFNTFVFCQVCLSTCIRST 948 (950)
Q Consensus 920 ~---~~~~~~~t~~F~~~v~~q~~n~~~~r~~ 948 (950)
. ......+|+.|+++|++|+||.++||+.
T Consensus 81 ~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~ 112 (182)
T PF00689_consen 81 ETNNDNLAQAQTMAFTALVLSQLFNAFNCRSR 112 (182)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSS
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhhhcccccc
Confidence 1 0123479999999999999999999984
No 38
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.53 E-value=4.9e-14 Score=127.70 Aligned_cols=126 Identities=23% Similarity=0.351 Sum_probs=107.0
Q ss_pred eEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhcccc
Q 002230 649 YTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQ 728 (950)
Q Consensus 649 l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~ 728 (950)
+...+.++---.+=++++++|++|++. +++++.|||...+....|+-.||....
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~r------------------------- 72 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVER------------------------- 72 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCceee-------------------------
Confidence 345566667777889999999999999 999999999999999999999997542
Q ss_pred EEeecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceee-cC-CCcHHHHhcCCEEeccCChhHHHHHH
Q 002230 729 VMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAM-GI-AGTEVAKESADVIILDDNFSTIVTVA 803 (950)
Q Consensus 729 v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiam-g~-~g~~~ak~~aDivl~~~~~~~i~~~i 803 (950)
|++...|+.|..+++.|++. ++.|.|+|||.||.+||++||+||+. +. +..+-+.++||+++-+ ...++++.
T Consensus 73 v~a~a~~e~K~~ii~eLkk~-~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~--i~e~ldl~ 146 (152)
T COG4087 73 VFAGADPEMKAKIIRELKKR-YEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE--IAEILDLL 146 (152)
T ss_pred eecccCHHHHHHHHHHhcCC-CcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh--HHHHHHHh
Confidence 99999999999999999987 89999999999999999999999875 31 2234477999999865 55555543
No 39
>PF12515 CaATP_NAI: Ca2+-ATPase N terminal autoinhibitory domain; InterPro: IPR024750 This entry represents the N-terminal autoinhibitory calmodulin-binding domain characteristic of certain calcium-transporting ATPases []. This domain binds calmodulin in a calcium-dependent fashion and has a conserved RRFR sequence motif. There are two completely conserved residues (F and W) that may be functionally important.; GO: 0005516 calmodulin binding
Probab=99.52 E-value=3.5e-15 Score=110.47 Aligned_cols=46 Identities=63% Similarity=1.076 Sum_probs=43.6
Q ss_pred cccccCCCCCCCCCcHHHHHHHHHhhhccccccccchhhhccchhhh
Q 002230 4 YLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFE 50 (950)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~f~~~~~~~~~~e 50 (950)
|+.++|+ +++||+|+|+++|||+|+++|+|++|||||++||+|+.|
T Consensus 1 yl~~~Fd-i~~Kn~s~e~l~rWR~a~~lv~N~~RRFR~~~dL~k~~e 46 (47)
T PF12515_consen 1 YLDDNFD-IPAKNSSEEALRRWRQAVGLVKNARRRFRYTADLKKREE 46 (47)
T ss_pred CCccccC-CCCCCCCHHHHHHHHHHhHHhccccceeeecccHhhHhc
Confidence 6789998 999999999999999999999999999999999998875
No 40
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=99.52 E-value=3e-14 Score=127.31 Aligned_cols=86 Identities=37% Similarity=0.595 Sum_probs=70.9
Q ss_pred hcCCCceeecCCC-ceeecCChhhhHHHHHHHHc--CCChHHHhhhcceEEEecCCCCCceEEEEEEcCCCcEEEEEcCc
Q 002230 507 NNTGGEVVIGEGN-KTEILGTPTETAILEFGLLL--GGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGA 583 (950)
Q Consensus 507 ~~~~~~~~~~~~~-~~~~~g~p~e~All~~a~~~--g~~~~~~~~~~~i~~~~pF~s~~k~msvvv~~~~~~~~~~~KGa 583 (950)
+|+++.+..+++. .....|+|+|.||+.|+... +.+....+..+++++.+||||+||+|+|+++ .++.+.+|+|||
T Consensus 2 LCn~a~~~~~~~~~~~~~~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA 80 (91)
T PF13246_consen 2 LCNDAEIEYDDESKTEEIIGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGA 80 (91)
T ss_pred CccccEeecCCCCccccccCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCC
Confidence 4566666554433 23489999999999999999 4567788899999999999999999999998 334577799999
Q ss_pred hHHHHHhccc
Q 002230 584 SEIILAACDK 593 (950)
Q Consensus 584 ~e~il~~c~~ 593 (950)
||.|+++|++
T Consensus 81 ~e~il~~Ct~ 90 (91)
T PF13246_consen 81 PEVILDRCTH 90 (91)
T ss_pred hHHHHHhcCC
Confidence 9999999985
No 41
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.14 E-value=2.9e-10 Score=124.02 Aligned_cols=68 Identities=31% Similarity=0.381 Sum_probs=60.3
Q ss_pred hhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHH
Q 002230 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~ 804 (950)
.+|...++.+.+++| +.|+++|||.||.+||+.|++|+||| |+.+.+|+.||+|..+++-.++.++|+
T Consensus 195 vsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 195 VNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMG-NAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEec-CccHHHHHhcCeeccCCCcchHHHHHH
Confidence 577888888877656 56889999999999999999999999 999999999999998888888888774
No 42
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=99.10 E-value=1.7e-10 Score=97.67 Aligned_cols=68 Identities=25% Similarity=0.524 Sum_probs=64.0
Q ss_pred HhcCHHHHHHHhCCCccCCCChhHHHHHHHHhhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHH
Q 002230 117 VHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVS 186 (950)
Q Consensus 117 ~~~~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~il~i~a~~s 186 (950)
+..+++++++.|+++...||++++ +.+|+++||+|.++.++.+++|+.++++|+++++++|++++++|
T Consensus 2 ~~~~~~~v~~~l~t~~~~GLs~~e--v~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 2 HQLSVEEVLKRLNTSSSQGLSSEE--VEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp TTSSHHHHHHHHTTBTSSBBTHHH--HHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHCcCCCCCCCHHH--HHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 346799999999999999999977 99999999999999999999999999999999999999999986
No 43
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.07 E-value=8.1e-10 Score=120.64 Aligned_cols=144 Identities=18% Similarity=0.234 Sum_probs=102.6
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cceee---eCcccc--cC---------------
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NGIAI---EGPEFR--EK--------------- 715 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~----~~~vi---~g~~~~--~~--------------- 715 (950)
.+.+.++++|++|++.|++++++||++...+..+.+++|+... |+..+ .|+.+. .+
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~~~ 98 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQWDT 98 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhhhc
Confidence 5889999999999999999999999999999999999997532 22111 010000 00
Q ss_pred ----------------------------------------------------CHHHHh---hhh----c-cccE------
Q 002230 716 ----------------------------------------------------SDEELS---KLI----P-KIQV------ 729 (950)
Q Consensus 716 ----------------------------------------------------~~~~~~---~~~----~-~~~v------ 729 (950)
.++++. +.+ . .+.+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~ 178 (272)
T PRK15126 99 RASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCFSATD 178 (272)
T ss_pred CcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEcCCc
Confidence 000000 001 0 0111
Q ss_pred EeecCh--hhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCE--EeccCChhHHHHH
Q 002230 730 MARSSP--MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADV--IILDDNFSTIVTV 802 (950)
Q Consensus 730 ~ar~~P--~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDi--vl~~~~~~~i~~~ 802 (950)
+....| ..|...++.+.+.+| +.|+++|||.||.+||+.|+.|+||| ++.+.+|++||+ ++.+++-.++.++
T Consensus 179 ~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-Na~~~vK~~A~~~~v~~~n~edGva~~ 257 (272)
T PRK15126 179 CLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMG-NAMPQLRAELPHLPVIGHCRNQAVSHY 257 (272)
T ss_pred EEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceecc-CChHHHHHhCCCCeecCCCcchHHHHH
Confidence 111222 468899998887766 56888999999999999999999999 999999999996 6777788888887
Q ss_pred HH
Q 002230 803 AK 804 (950)
Q Consensus 803 i~ 804 (950)
|+
T Consensus 258 l~ 259 (272)
T PRK15126 258 LT 259 (272)
T ss_pred HH
Confidence 64
No 44
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.06 E-value=1.2e-09 Score=118.90 Aligned_cols=144 Identities=30% Similarity=0.395 Sum_probs=107.1
Q ss_pred CCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cce-eee-Ccccc---------------------
Q 002230 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NGI-AIE-GPEFR--------------------- 713 (950)
Q Consensus 661 lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~----~~~-vi~-g~~~~--------------------- 713 (950)
+.+.+.++|+++++.|+++.++||++...+..+.+++|+... ++. +.. |+.+.
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~~ 100 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEELLELLEDFQG 100 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHHHHHHHhccC
Confidence 899999999999999999999999999999999999998741 210 000 00000
Q ss_pred ------------------------------------------------cCCH---HHHhh----hhc-cccEEeecCh--
Q 002230 714 ------------------------------------------------EKSD---EELSK----LIP-KIQVMARSSP-- 735 (950)
Q Consensus 714 ------------------------------------------------~~~~---~~~~~----~~~-~~~v~ar~~P-- 735 (950)
.... ++..+ .++ ....+.+..+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~ 180 (264)
T COG0561 101 IALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSGPIS 180 (264)
T ss_pred ceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEcCCce
Confidence 0001 11111 111 1223333332
Q ss_pred -------hhHHHHHHHHhhhCCC---EEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHH
Q 002230 736 -------MDKHTLVKHLRTTLGE---VVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 805 (950)
Q Consensus 736 -------~~K~~~V~~l~~~~g~---~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~ 805 (950)
.+|...++.+.+++|- .|+++||+.||.+||+.|+.|+||| ++.+.+|+.||++...++-.+|.+++++
T Consensus 181 lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~-Na~~~~k~~A~~vt~~n~~~Gv~~~l~~ 259 (264)
T COG0561 181 LDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDEDGVAEALEK 259 (264)
T ss_pred EEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeecc-CCCHHHHhhCCcccCCccchHHHHHHHH
Confidence 6899999999887673 4999999999999999999999999 8899999999988899999999988864
No 45
>PRK10976 putative hydrolase; Provisional
Probab=99.02 E-value=2e-09 Score=117.24 Aligned_cols=68 Identities=24% Similarity=0.285 Sum_probs=58.8
Q ss_pred hhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCC--EEeccCChhHHHHHHH
Q 002230 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESAD--VIILDDNFSTIVTVAK 804 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aD--ivl~~~~~~~i~~~i~ 804 (950)
..|...++.+.+++| +.|+++|||.||.+||+.|+.|+||| ++.+.+|+.|| .|+.+++-.++.++|+
T Consensus 189 vsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 189 VSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMG-NAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred CChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeec-CCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 468888888877666 56889999999999999999999999 99999999988 7777888888888774
No 46
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.00 E-value=1.8e-09 Score=119.34 Aligned_cols=128 Identities=21% Similarity=0.324 Sum_probs=99.7
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC--Ccee-eeCcccccCCHHHHhhhhccccEEe-ecCh
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD--NGIA-IEGPEFREKSDEELSKLIPKIQVMA-RSSP 735 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~--~~~v-i~g~~~~~~~~~~~~~~~~~~~v~a-r~~P 735 (950)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+..- +..- .+|.- . ..+.. -+..
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~l-t-------------g~v~g~iv~~ 246 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKL-T-------------GNVLGDIVDA 246 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEE-E-------------eEecCccCCc
Confidence 5799999999999999999999999998889999999998531 0000 01100 0 00110 0234
Q ss_pred hhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHH
Q 002230 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVA 803 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i 803 (950)
..|...++.+.+++| +.+.++|||.||.+|++.|++|+|| ++.+..++.||.++...++.++..++
T Consensus 247 k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~~i~~~~l~~~l~~~ 315 (322)
T PRK11133 247 QYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKPKVNEQAQVTIRHADLMGVLCIL 315 (322)
T ss_pred ccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEecCcCHHHHHHHh
Confidence 689999988877656 5788899999999999999999999 68888999999999988999888765
No 47
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.00 E-value=2.4e-09 Score=112.60 Aligned_cols=142 Identities=25% Similarity=0.335 Sum_probs=101.7
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eeeeC-ccc--ccC----------------
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIEG-PEF--REK---------------- 715 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~----~~-~vi~g-~~~--~~~---------------- 715 (950)
.+.+++.++|++|++.|++++++||++...+..+++.+++... ++ .+... ... ...
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 4889999999999999999999999999999999999998632 22 11111 100 000
Q ss_pred -------------------CHHHHhhhhcc--ccE-------EeecChhhHHHHHHHHhhhCC---CEEEEEcCCccCHH
Q 002230 716 -------------------SDEELSKLIPK--IQV-------MARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAP 764 (950)
Q Consensus 716 -------------------~~~~~~~~~~~--~~v-------~ar~~P~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~ 764 (950)
..+.+.+.+.+ +.+ .......+|...++.+.+.+| +.++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 00011111111 111 111224689999998877655 35899999999999
Q ss_pred hhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHH
Q 002230 765 ALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTV 802 (950)
Q Consensus 765 al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~ 802 (950)
|++.|++|+||+ ++.+.+|+.||++..+++-.++.++
T Consensus 178 ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 178 LFRVVGFKVAVA-NADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHhCCCeEEcC-CccHHHHHhCCEEcCCCCCchhhhh
Confidence 999999999999 9999999999999987777776654
No 48
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.00 E-value=2.8e-09 Score=113.33 Aligned_cols=144 Identities=25% Similarity=0.302 Sum_probs=103.8
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cce-eee---CcccccC----------------
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NGI-AIE---GPEFREK---------------- 715 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~----~~~-vi~---g~~~~~~---------------- 715 (950)
++.+.+.++|+++++.|++++++||++...+..+++.+|+... ++. +.. ++.+...
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (230)
T PRK01158 20 RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRF 99 (230)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhc
Confidence 3788999999999999999999999999999999999998532 221 211 1111000
Q ss_pred -------------------------CHHHHhhhhcc----ccE-----EeecCh--hhHHHHHHHHhhhCC---CEEEEE
Q 002230 716 -------------------------SDEELSKLIPK----IQV-----MARSSP--MDKHTLVKHLRTTLG---EVVAVT 756 (950)
Q Consensus 716 -------------------------~~~~~~~~~~~----~~v-----~ar~~P--~~K~~~V~~l~~~~g---~~v~~v 756 (950)
..+++.+.+.+ ..+ +....| ..|...++.+.+++| +.++++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~ 179 (230)
T PRK01158 100 PEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAI 179 (230)
T ss_pred cccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEE
Confidence 00111111110 111 112223 358888888877655 468999
Q ss_pred cCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHH
Q 002230 757 GDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 757 GDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~ 804 (950)
||+.||.+|++.|++|+||| ++.+.+|+.||++..+++-.++.++++
T Consensus 180 GD~~NDi~m~~~ag~~vam~-Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 180 GDSENDLEMFEVAGFGVAVA-NADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CCchhhHHHHHhcCceEEec-CccHHHHHhcceEecCCCcChHHHHHH
Confidence 99999999999999999999 999999999999998888888888774
No 49
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=98.98 E-value=2.8e-09 Score=110.50 Aligned_cols=128 Identities=16% Similarity=0.116 Sum_probs=95.7
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC--CceeeeC-cccccCCHHHHhhhhccccEEeecChh
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD--NGIAIEG-PEFREKSDEELSKLIPKIQVMARSSPM 736 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~--~~~vi~g-~~~~~~~~~~~~~~~~~~~v~ar~~P~ 736 (950)
+++|++.+.|+.+++.| ++.++||-....+..+++++|+..- +.+.+++ ..+. .. .. ..+.
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~t------------G~-~~--~~~~ 131 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVV------------GY-QL--RQKD 131 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCeeE------------Ce-ee--cCcc
Confidence 57999999999999985 9999999999999999999999631 1111111 0000 00 11 3578
Q ss_pred hHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHHH
Q 002230 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWG 806 (950)
Q Consensus 737 ~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~g 806 (950)
.|...++.+++. |..+.++|||.||.+|++.||+|+++. +.+..+++||=.-.-.+.+.+..++.++
T Consensus 132 ~K~~~l~~l~~~-~~~~v~vGDs~nDl~ml~~Ag~~ia~~--ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 132 PKRQSVIAFKSL-YYRVIAAGDSYNDTTMLSEAHAGILFH--APENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred hHHHHHHHHHhh-CCCEEEEeCCHHHHHHHHhCCCCEEec--CCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 999999999877 877889999999999999999999995 5666566555444444577777776554
No 50
>PLN02887 hydrolase family protein
Probab=98.96 E-value=3.6e-09 Score=124.98 Aligned_cols=68 Identities=32% Similarity=0.437 Sum_probs=58.6
Q ss_pred hhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHH
Q 002230 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~ 804 (950)
.+|...++.|.+.+| +.|+++|||.||.+||+.|++||||| |+.+.+|+.||+|..+++-.+|.++|+
T Consensus 506 vSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMg-NA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 506 TSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALS-NGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeC-CCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 356666777766655 46888899999999999999999999 999999999999998888889988775
No 51
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=98.96 E-value=1.5e-09 Score=90.48 Aligned_cols=62 Identities=31% Similarity=0.487 Sum_probs=57.4
Q ss_pred HhCCCccCCCChhHHHHHHHHhhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhh
Q 002230 127 KLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVG 190 (950)
Q Consensus 127 ~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~il~i~a~~s~~~~ 190 (950)
.|++++..||+.++ +++|+++||.|+++.++.+++|+.++++|+++++++|++++++|++++
T Consensus 2 ~l~~~~~~GLs~~~--v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~~ 63 (64)
T smart00831 2 RLQTSLESGLSSEE--AARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALLG 63 (64)
T ss_pred CCCCCcccCCCHHH--HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 46788888999877 999999999999999989999999999999999999999999998765
No 52
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.92 E-value=4.4e-09 Score=112.81 Aligned_cols=145 Identities=27% Similarity=0.357 Sum_probs=103.4
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cceee--------------------------
Q 002230 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NGIAI-------------------------- 707 (950)
Q Consensus 658 ~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~----~~~vi-------------------------- 707 (950)
...+.+.+.+++++++++|++++++||+....+..+..++++... +|.++
T Consensus 13 ~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~ 92 (254)
T PF08282_consen 13 DGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLK 92 (254)
T ss_dssp TSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHH
T ss_pred CCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhh
Confidence 345778999999999999999999999999999999999998621 11111
Q ss_pred ---------eCcccc---c------------------------------------CCHHH-------HhhhhccccEEee
Q 002230 708 ---------EGPEFR---E------------------------------------KSDEE-------LSKLIPKIQVMAR 732 (950)
Q Consensus 708 ---------~g~~~~---~------------------------------------~~~~~-------~~~~~~~~~v~ar 732 (950)
++..+. . ...++ +.+.++....+.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 172 (254)
T PF08282_consen 93 EHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVR 172 (254)
T ss_dssp HTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred hcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEE
Confidence 000000 0 00111 1111221112222
Q ss_pred -------c--ChhhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHH
Q 002230 733 -------S--SPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIV 800 (950)
Q Consensus 733 -------~--~P~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~ 800 (950)
. ...+|...++.+.+.+| +.++++||+.||.+||+.|+.|+||+ ++++..|+.||+++...+=.++.
T Consensus 173 ~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~-na~~~~k~~a~~i~~~~~~~gv~ 251 (254)
T PF08282_consen 173 SSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMG-NATPELKKAADYITPSNNDDGVA 251 (254)
T ss_dssp EETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEET-TS-HHHHHHSSEEESSGTCTHHH
T ss_pred ecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEc-CCCHHHHHhCCEEecCCCCChHH
Confidence 2 23789999999887655 57888899999999999999999999 99999999999999877667887
Q ss_pred HHH
Q 002230 801 TVA 803 (950)
Q Consensus 801 ~~i 803 (950)
++|
T Consensus 252 ~~i 254 (254)
T PF08282_consen 252 KAI 254 (254)
T ss_dssp HHH
T ss_pred HhC
Confidence 654
No 53
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.92 E-value=1.1e-08 Score=108.37 Aligned_cols=143 Identities=24% Similarity=0.313 Sum_probs=101.0
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eeeeCc---c-cc-cCC-------------
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIEGP---E-FR-EKS------------- 716 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~----~~-~vi~g~---~-~~-~~~------------- 716 (950)
.+.+.+.++|+++++.|++++++||++...+..+++++|+... ++ .+.... . +. .+.
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 4778899999999999999999999999999999999996422 22 111111 0 00 000
Q ss_pred -----------------------HHHHhhhhcc----ccE-----EeecCh--hhHHHHHHHHhhhCC---CEEEEEcCC
Q 002230 717 -----------------------DEELSKLIPK----IQV-----MARSSP--MDKHTLVKHLRTTLG---EVVAVTGDG 759 (950)
Q Consensus 717 -----------------------~~~~~~~~~~----~~v-----~ar~~P--~~K~~~V~~l~~~~g---~~v~~vGDG 759 (950)
.+...+.... ..+ +....| .+|...++.+.+++| +.++++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 0111111100 001 111122 588888988877656 568899999
Q ss_pred ccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhH----HHHHH
Q 002230 760 TNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFST----IVTVA 803 (950)
Q Consensus 760 ~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~----i~~~i 803 (950)
.||.+|++.|++|+||+ ++.+.+|+.||+|..+++-.+ +..++
T Consensus 175 ~NDi~m~~~ag~~vam~-Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l 221 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVA-NAQPELKEWADYVTESPYGEGGAEAIGEIL 221 (225)
T ss_pred HhhHHHHHhcCceEEcC-ChhHHHHHhcCeecCCCCCCcHHHHHHHHH
Confidence 99999999999999999 999999999999998777777 65555
No 54
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.87 E-value=1.7e-08 Score=110.19 Aligned_cols=68 Identities=28% Similarity=0.387 Sum_probs=58.4
Q ss_pred hhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHH
Q 002230 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~ 804 (950)
.+|...++.+.+++| +.++++||+.||.+|++.|++|+||| ++.+..|+.||+++.+++-.++.++|+
T Consensus 198 ~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamg-na~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 198 NSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMG-NADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred CChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEec-CchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 457777777766656 46889999999999999999999999 888888999999998888889988774
No 55
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.85 E-value=1.5e-08 Score=105.65 Aligned_cols=115 Identities=27% Similarity=0.328 Sum_probs=90.5
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCce-------eeeCcccccCCHHHHhhhhccccEEe
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGI-------AIEGPEFREKSDEELSKLIPKIQVMA 731 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~-------vi~g~~~~~~~~~~~~~~~~~~~v~a 731 (950)
.+++|++.+.++.++++|.+|+++||-...-+..+|+.+|+...-.. +++|. +..
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~------------------v~g 137 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGR------------------VVG 137 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEece------------------eee
Confidence 68999999999999999999999999999999999999999753211 22332 333
Q ss_pred -ecChhhHHHHHHHHhhhCCC---EEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEecc
Q 002230 732 -RSSPMDKHTLVKHLRTTLGE---VVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILD 793 (950)
Q Consensus 732 -r~~P~~K~~~V~~l~~~~g~---~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~ 793 (950)
.+..+.|...++.+.+..|. .+.++|||.||.|||+.|+.+++.. +.+..+..|+..+..
T Consensus 138 ~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n--~~~~l~~~a~~~~~~ 201 (212)
T COG0560 138 PICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVN--PKPKLRALADVRIWP 201 (212)
T ss_pred eecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeC--cCHHHHHHHHHhcCh
Confidence 34557899999887776563 5888899999999999999999985 555556666665543
No 56
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.84 E-value=1.2e-08 Score=107.66 Aligned_cols=128 Identities=21% Similarity=0.314 Sum_probs=95.3
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc--eeeeCcccccCCHHHHhhhhccccEEee-cChh
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG--IAIEGPEFREKSDEELSKLIPKIQVMAR-SSPM 736 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~--~vi~g~~~~~~~~~~~~~~~~~~~v~ar-~~P~ 736 (950)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+..--. ....+..+. ..+.+. ..+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~ 151 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLT-------------GLVEGPIVDAS 151 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEE-------------EEecCcccCCc
Confidence 589999999999999999999999999999999999999864110 000000000 001111 1233
Q ss_pred hHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHH
Q 002230 737 DKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTV 802 (950)
Q Consensus 737 ~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~ 802 (950)
.|..+++.+.++.| +.+.++||+.||.+|++.|+++++++ +.+..+++||+++.+++|..+..+
T Consensus 152 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~--~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 152 YKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN--AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred ccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC--CCHHHHHhchhccCCCCHHHHHhh
Confidence 47777776655534 35788999999999999999999885 678888999999999999888764
No 57
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.78 E-value=2.2e-08 Score=100.16 Aligned_cols=101 Identities=18% Similarity=0.213 Sum_probs=80.4
Q ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHHHHHh
Q 002230 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLR 746 (950)
Q Consensus 667 ~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~ 746 (950)
.+|+.|++.|+++.++|+.+...+..+.+.+|+.. .|.... .|...++.+.
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~---------------------------~f~~~k--pkp~~~~~~~ 91 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR---------------------------FHEGIK--KKTEPYAQML 91 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE---------------------------EEecCC--CCHHHHHHHH
Confidence 58999999999999999999999999999999963 232222 2333344333
Q ss_pred hhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChh
Q 002230 747 TTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFS 797 (950)
Q Consensus 747 ~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~ 797 (950)
+++| +.++++||+.||.+|++.|++++||+ ++.+..++.||+|...++=.
T Consensus 92 ~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~-nA~~~lk~~A~~I~~~~~~~ 144 (169)
T TIGR02726 92 EEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVG-DAVADVKEAAAYVTTARGGH 144 (169)
T ss_pred HHcCcCHHHEEEECCCHHHHHHHHHCCCeEECc-CchHHHHHhCCEEcCCCCCC
Confidence 3323 56999999999999999999999999 88999999999998654433
No 58
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.77 E-value=4.4e-08 Score=97.17 Aligned_cols=98 Identities=19% Similarity=0.273 Sum_probs=80.7
Q ss_pred HHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHHHHHhh
Q 002230 668 SVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRT 747 (950)
Q Consensus 668 ~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~ 747 (950)
+|++|++.|+++.++||++...+..+.+.+|+.. .+... ..|...++.+.+
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~---------------------------~~~~~--~~k~~~~~~~~~ 86 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH---------------------------LYQGQ--SNKLIAFSDILE 86 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE---------------------------EEecc--cchHHHHHHHHH
Confidence 8999999999999999999999999999999863 22221 345556665544
Q ss_pred hCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCC
Q 002230 748 TLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 795 (950)
Q Consensus 748 ~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~ 795 (950)
++| +.++|+||+.||.+|++.|+++++|. ++.+..+..||+++..+.
T Consensus 87 ~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~-~~~~~~~~~a~~i~~~~~ 136 (154)
T TIGR01670 87 KLALAPENVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAG 136 (154)
T ss_pred HcCCCHHHEEEECCCHHHHHHHHHCCCeEecC-CcCHHHHHhCCEEecCCC
Confidence 334 57999999999999999999999998 788888999999997554
No 59
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.69 E-value=8.2e-08 Score=103.87 Aligned_cols=66 Identities=33% Similarity=0.430 Sum_probs=57.5
Q ss_pred hhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHH
Q 002230 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTV 802 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~ 802 (950)
..|...++.+.+.+| +.++++||+.||.+|++.|++|+||+ ++.+..|+.||+++.+++-.++.++
T Consensus 187 ~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~-na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 187 VSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred CChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec-CchHHHHHhCCEEecCCCCcchhhh
Confidence 568888988887655 46899999999999999999999999 8899999999999988777777654
No 60
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.67 E-value=2.3e-07 Score=100.36 Aligned_cols=144 Identities=17% Similarity=0.126 Sum_probs=97.2
Q ss_pred CCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCcc----CCce-eeeCc--c------cc--cCCHHHHhh---
Q 002230 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT----DNGI-AIEGP--E------FR--EKSDEELSK--- 722 (950)
Q Consensus 661 lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~----~~~~-vi~g~--~------~~--~~~~~~~~~--- 722 (950)
..+.+.++|++|+++|++++++||+....+..+.+++|+.. .++. +.... . +. .++.+...+
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 44568999999999999999999999999999999999752 2332 22211 1 00 011110000
Q ss_pred --------------------------------------------------------hhcc--ccEE-----eec--Chhh
Q 002230 723 --------------------------------------------------------LIPK--IQVM-----ARS--SPMD 737 (950)
Q Consensus 723 --------------------------------------------------------~~~~--~~v~-----ar~--~P~~ 737 (950)
.+.+ +.+. -.. .-..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ei~~~~~~ 176 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILWSEERRERFTEALVELGLEVTHGNRFYHVLGAGSD 176 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceecChHHHHHHHHHHHHcCCEEEeCCceEEEecCCCC
Confidence 0000 0000 001 1257
Q ss_pred HHHHHHHHhhhCC-----CEEEEEcCCccCHHhhhcCCcceeecCCCc---HHHHhc--C-CEEeccCChhHHHHHHHH
Q 002230 738 KHTLVKHLRTTLG-----EVVAVTGDGTNDAPALHEADIGLAMGIAGT---EVAKES--A-DVIILDDNFSTIVTVAKW 805 (950)
Q Consensus 738 K~~~V~~l~~~~g-----~~v~~vGDG~ND~~al~~AdvGiamg~~g~---~~ak~~--a-Divl~~~~~~~i~~~i~~ 805 (950)
|...++.+.+.+| +.++++||+.||.+|++.|++|+||| ++. +..|+. | ++|..+++-.++.+++++
T Consensus 177 Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~-Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~~ 254 (256)
T TIGR01486 177 KGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVP-GPNGPNVSLKPGDPGSFLLTPAPGPEGWREALEH 254 (256)
T ss_pred HHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeC-CCCCCccccCccCCCcEEEcCCCCcHHHHHHHHH
Confidence 7777777766543 45899999999999999999999999 776 357776 4 588888888888887753
No 61
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.65 E-value=2.5e-07 Score=101.02 Aligned_cols=145 Identities=15% Similarity=0.108 Sum_probs=96.2
Q ss_pred CCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCcc-----CCc-eeeeCcc--------c-c-cCCHHHHhhh-
Q 002230 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT-----DNG-IAIEGPE--------F-R-EKSDEELSKL- 723 (950)
Q Consensus 661 lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~-----~~~-~vi~g~~--------~-~-~~~~~~~~~~- 723 (950)
+-+.+.++|++|+++|++++++||+....+..+++++|+.. .|+ .+..... . . .++.+...++
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 104 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEIRQVL 104 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEeecCCCHHHHHHHH
Confidence 45678999999999999999999999999999999999842 123 2222100 0 0 0111100000
Q ss_pred ------------------------------------------------------------hc--cccE-----EeecCh-
Q 002230 724 ------------------------------------------------------------IP--KIQV-----MARSSP- 735 (950)
Q Consensus 724 ------------------------------------------------------------~~--~~~v-----~ar~~P- 735 (950)
+. .+.+ +-...|
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iEi~~~ 184 (271)
T PRK03669 105 NTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDERMAQFTARLAELGLQFVQGARFWHVLDA 184 (271)
T ss_pred HHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHHHHHHHHHHHHHCCCEEEecCeeEEEecC
Confidence 00 0001 001122
Q ss_pred -hhHHHHHHHHhhhCC------CEEEEEcCCccCHHhhhcCCcceeecCCCcHH-----HHhcCCEEeccCChhHHHHHH
Q 002230 736 -MDKHTLVKHLRTTLG------EVVAVTGDGTNDAPALHEADIGLAMGIAGTEV-----AKESADVIILDDNFSTIVTVA 803 (950)
Q Consensus 736 -~~K~~~V~~l~~~~g------~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~-----ak~~aDivl~~~~~~~i~~~i 803 (950)
.+|...++.+.+.+| +.|+++|||.||.+||+.|++|+|||....+. .+..+|++....+-.++.+++
T Consensus 185 g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l 264 (271)
T PRK03669 185 SAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGL 264 (271)
T ss_pred CCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHH
Confidence 577777777766534 46889999999999999999999999333232 345789999888888888877
Q ss_pred HH
Q 002230 804 KW 805 (950)
Q Consensus 804 ~~ 805 (950)
++
T Consensus 265 ~~ 266 (271)
T PRK03669 265 DH 266 (271)
T ss_pred HH
Confidence 54
No 62
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.63 E-value=1.3e-07 Score=96.74 Aligned_cols=108 Identities=19% Similarity=0.235 Sum_probs=86.0
Q ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHHHHHh
Q 002230 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLR 746 (950)
Q Consensus 667 ~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~ 746 (950)
.+|+.|++.|+++.++||++...+..+++++|+.. +|. ...+|...++.+.
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~---------------------------~f~--g~~~k~~~l~~~~ 105 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH---------------------------LYQ--GQSNKLIAFSDLL 105 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce---------------------------eec--CCCcHHHHHHHHH
Confidence 68999999999999999999999999999999863 332 2345666666665
Q ss_pred hhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCC----hhHHHHHHH
Q 002230 747 TTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN----FSTIVTVAK 804 (950)
Q Consensus 747 ~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~----~~~i~~~i~ 804 (950)
+++| +.++|+||+.||.+|++.|+++++++ ++.+..+..||+++...+ +..+.+.+.
T Consensus 106 ~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~-~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~ 169 (183)
T PRK09484 106 EKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLLPRADYVTRIAGGRGAVREVCDLLL 169 (183)
T ss_pred HHhCCCHHHEEEECCCHHHHHHHHHCCCeEecC-ChhHHHHHhCCEEecCCCCCCHHHHHHHHHH
Confidence 5435 47999999999999999999999998 778888899999996322 445555443
No 63
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.56 E-value=1.9e-07 Score=88.52 Aligned_cols=119 Identities=19% Similarity=0.283 Sum_probs=97.3
Q ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHHHHHh
Q 002230 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLR 746 (950)
Q Consensus 667 ~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~ 746 (950)
-.|+.|.++||++.++||++...+..-|+++||.. ++- --.+|....+.|.
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~---------------------------~~q--G~~dK~~a~~~L~ 92 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH---------------------------LYQ--GISDKLAAFEELL 92 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce---------------------------eee--chHhHHHHHHHHH
Confidence 47999999999999999999999999999999963 222 2358888888887
Q ss_pred hhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCC----hhHHHHHHHHHHHHHHHHHH
Q 002230 747 TTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN----FSTIVTVAKWGRSVYINIQK 815 (950)
Q Consensus 747 ~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~----~~~i~~~i~~gR~~~~~i~k 815 (950)
++++ +.|+++||..||.|+|+..+.++|+. .+.+..++.||+|+.... +..+.++|..++..++-..+
T Consensus 93 ~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~-dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d~~~~ 167 (170)
T COG1778 93 KKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVA-DAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLDEALG 167 (170)
T ss_pred HHhCCCHHHhhhhcCccccHHHHHHcCCccccc-ccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHHHHHh
Confidence 7645 57999999999999999999999998 888888999999997543 55666677666666554443
No 64
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.50 E-value=6.7e-07 Score=93.20 Aligned_cols=123 Identities=22% Similarity=0.303 Sum_probs=90.1
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC--CceeeeCcccccCCHHHHhhhhccccEEe--ecCh
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD--NGIAIEGPEFREKSDEELSKLIPKIQVMA--RSSP 735 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~--~~~vi~g~~~~~~~~~~~~~~~~~~~v~a--r~~P 735 (950)
++.||+.+.++.|+++ +++.++|+.....+..+.+++|+..- +.....+.. .+.. -..|
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~----------------~i~~~~~~~p 130 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDG----------------MITGYDLRQP 130 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCC----------------eEECcccccc
Confidence 4689999999999999 99999999999999999999998531 111111110 0111 1247
Q ss_pred hhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCE-EeccCChhHHHHHH
Q 002230 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADV-IILDDNFSTIVTVA 803 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDi-vl~~~~~~~i~~~i 803 (950)
..|...++.++.. ++.+.|+|||.||.+|.+.|++|+..+ .+.+.....++. ++. ++..+...+
T Consensus 131 ~~k~~~l~~~~~~-~~~~v~iGDs~~D~~~~~aa~~~v~~~-~~~~~~~~~~~~~~~~--~~~el~~~l 195 (205)
T PRK13582 131 DGKRQAVKALKSL-GYRVIAAGDSYNDTTMLGEADAGILFR-PPANVIAEFPQFPAVH--TYDELLAAI 195 (205)
T ss_pred chHHHHHHHHHHh-CCeEEEEeCCHHHHHHHHhCCCCEEEC-CCHHHHHhCCcccccC--CHHHHHHHH
Confidence 7888999988877 788999999999999999999999876 444444455665 443 366666554
No 65
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.49 E-value=1.4e-06 Score=95.26 Aligned_cols=67 Identities=22% Similarity=0.213 Sum_probs=53.3
Q ss_pred hHHHHHHHHhhhCC----CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHH----hcC-CEEe--ccCChhHHHHHHH
Q 002230 737 DKHTLVKHLRTTLG----EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAK----ESA-DVII--LDDNFSTIVTVAK 804 (950)
Q Consensus 737 ~K~~~V~~l~~~~g----~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak----~~a-Divl--~~~~~~~i~~~i~ 804 (950)
+|...++.+.+.+| +.|+++||+.||.+|++.|++|+||+ |+.+..| ..| +.+. ..++-.++.++++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~-NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVP-GPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeC-CCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 67777777665433 78999999999999999999999999 9998888 666 6777 4555677777664
No 66
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.43 E-value=8.9e-07 Score=91.83 Aligned_cols=118 Identities=22% Similarity=0.241 Sum_probs=82.8
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
+++|++.+.++.|++.|+++.++|+-....+..+++.+|+..--+..+...+-.... +. .+....|..|.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~~--------p~--~~~~~~~~~k~ 149 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGFIQ--------PD--GIVRVTFDNKG 149 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCeEe--------cc--eeeEEccccHH
Confidence 589999999999999999999999999999999999999753111111100000000 11 11223466787
Q ss_pred HHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCC
Q 002230 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESAD 788 (950)
Q Consensus 740 ~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aD 788 (950)
..++.+.+++| +.+.++||+.||.+|++.||++++++ .+....+.++|
T Consensus 150 ~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~-~~~~~~~~a~~ 200 (201)
T TIGR01491 150 EAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLG-DEGHADYLAKD 200 (201)
T ss_pred HHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC-CCccchhhccc
Confidence 77777655434 46899999999999999999999997 44444555554
No 67
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=98.34 E-value=2e-06 Score=91.92 Aligned_cols=69 Identities=19% Similarity=0.214 Sum_probs=58.4
Q ss_pred hhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCC----EEeccCChhHHHHHHHH
Q 002230 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESAD----VIILDDNFSTIVTVAKW 805 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aD----ivl~~~~~~~i~~~i~~ 805 (950)
..|...++.+.+++| ..++++||+.||.+|++.+++|++|+ ++.+..|+.|| ++...++-.++.++|.+
T Consensus 158 ~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~-na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 158 ASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVG-NHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEc-CCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 478888888877756 25788999999999999999999999 88999999999 77777677788887753
No 68
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.33 E-value=1.2e-06 Score=85.86 Aligned_cols=105 Identities=23% Similarity=0.371 Sum_probs=77.3
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc----eee--eCcccccCCHHHHhhhhccccEEeec
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG----IAI--EGPEFREKSDEELSKLIPKIQVMARS 733 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~----~vi--~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (950)
.+-||+++.++.|++.|.++.++||--..-+..+|.++||+..+. +.. .|+-..- ....-. +
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gf----------d~~~pt--s 155 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGF----------DTNEPT--S 155 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCccccc----------ccCCcc--c
Confidence 467999999999999999999999999999999999999986421 110 1111000 000011 2
Q ss_pred ChhhHHHHHHHHhhhCC-CEEEEEcCCccCHHhhhcCCcceeec
Q 002230 734 SPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHEADIGLAMG 776 (950)
Q Consensus 734 ~P~~K~~~V~~l~~~~g-~~v~~vGDG~ND~~al~~AdvGiamg 776 (950)
...-|..+++.+++.+. +.++|+|||.||.+|+..||.=|+.|
T Consensus 156 dsggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 156 DSGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred cCCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 23579999999987633 68999999999999999988766555
No 69
>PLN02954 phosphoserine phosphatase
Probab=98.24 E-value=9.2e-06 Score=85.93 Aligned_cols=125 Identities=26% Similarity=0.363 Sum_probs=85.0
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc----eeeeCcccccCCHHHHhhhhccccEEee---
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG----IAIEGPEFREKSDEELSKLIPKIQVMAR--- 732 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~----~vi~g~~~~~~~~~~~~~~~~~~~v~ar--- 732 (950)
+++|++.+.++.|++.|+++.++||.....+..+++.+|+...+- .....+ ..+.+.
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~----------------g~~~g~~~~ 147 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDS----------------GEYAGFDEN 147 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCC----------------CcEECccCC
Confidence 378999999999999999999999999999999999999963110 000000 001111
Q ss_pred ---cChhhHHHHHHHHhhhCC-CEEEEEcCCccCHHhhhc--CCcceeecCCC-cHHHHhcCCEEeccCChhHHHHH
Q 002230 733 ---SSPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHE--ADIGLAMGIAG-TEVAKESADVIILDDNFSTIVTV 802 (950)
Q Consensus 733 ---~~P~~K~~~V~~l~~~~g-~~v~~vGDG~ND~~al~~--AdvGiamg~~g-~~~ak~~aDivl~~~~~~~i~~~ 802 (950)
+....|...++.+.+++| +.+.++||+.||..|.++ ++++++.|... .+.....+|+++.+ +..+.+.
T Consensus 148 ~~~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~el~~~ 222 (224)
T PLN02954 148 EPTSRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTD--FQDLIEV 222 (224)
T ss_pred CcccCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECC--HHHHHHh
Confidence 112457777877766534 568899999999999888 45556555211 23345568999854 6666543
No 70
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.22 E-value=7.3e-06 Score=86.12 Aligned_cols=133 Identities=17% Similarity=0.154 Sum_probs=88.2
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC---CceeeeCcccccCCHHHHhhhhccccEE--e-e
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD---NGIAIEGPEFREKSDEELSKLIPKIQVM--A-R 732 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~---~~~vi~g~~~~~~~~~~~~~~~~~~~v~--a-r 732 (950)
-+++||+.+.++.|++.|+++.++||.....+..+.+.++.... +....+|..+.... |.-..+ . .
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~--------p~~~~~~~~~~ 140 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDW--------PHPCDGTCQNQ 140 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeC--------CCCCccccccC
Confidence 47899999999999999999999999999999999888754321 12233333322100 000000 0 1
Q ss_pred cChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHh--cCCEEeccCChhHHHHHHH
Q 002230 733 SSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKE--SADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 733 ~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~--~aDivl~~~~~~~i~~~i~ 804 (950)
| ...|..+++.++.. .+.+.|+|||.||.+|++.||+.+|-+ .-.+-.++ .+.+.+ ++|..+...++
T Consensus 141 c-g~~K~~~l~~~~~~-~~~~i~iGDg~~D~~~a~~Ad~~~ar~-~l~~~~~~~~~~~~~~--~~f~di~~~l~ 209 (214)
T TIGR03333 141 C-GCCKPSLIRKLSEP-NDYHIVIGDSVTDVEAAKQSDLCFARD-YLLNECEELGLNHAPF--QDFYDVRKELE 209 (214)
T ss_pred C-CCCHHHHHHHHhhc-CCcEEEEeCCHHHHHHHHhCCeeEehH-HHHHHHHHcCCCccCc--CCHHHHHHHHH
Confidence 1 35799999998876 677899999999999999999988644 21121111 122222 45888877653
No 71
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.21 E-value=9.5e-06 Score=87.40 Aligned_cols=146 Identities=17% Similarity=0.175 Sum_probs=98.3
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC------Cce-eeeCc-ccc----------------
Q 002230 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD------NGI-AIEGP-EFR---------------- 713 (950)
Q Consensus 658 ~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~------~~~-vi~g~-~~~---------------- 713 (950)
..+..|...++++++++.|+.++++||+....++.+.+++++..+ ++. +..+. ...
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 456778999999999999999999999999999999999997654 221 11111 000
Q ss_pred ---------cC-----------------CHHH-------Hhhhhc----cccE-Ee-----ecCh--hhHHHHHHHHhhh
Q 002230 714 ---------EK-----------------SDEE-------LSKLIP----KIQV-MA-----RSSP--MDKHTLVKHLRTT 748 (950)
Q Consensus 714 ---------~~-----------------~~~~-------~~~~~~----~~~v-~a-----r~~P--~~K~~~V~~l~~~ 748 (950)
.+ ..+. +.+.+. .+.+ .+ ...| ..|...++.+.++
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 00 0000 111111 1111 11 1233 6899999998876
Q ss_pred CC---CEEEEEcCCccCHHhhhc-CCcceeecCCCcHHHHhcCC-------EEeccCChhHHHHHHH
Q 002230 749 LG---EVVAVTGDGTNDAPALHE-ADIGLAMGIAGTEVAKESAD-------VIILDDNFSTIVTVAK 804 (950)
Q Consensus 749 ~g---~~v~~vGDG~ND~~al~~-AdvGiamg~~g~~~ak~~aD-------ivl~~~~~~~i~~~i~ 804 (950)
+| +.|+++||+.||.+|++. ++.|++|+ ++.+..|+.++ ++.....-+++.++++
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~-na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVS-NAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEEC-CCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 55 578999999999999998 67999999 88887776443 5444445567777664
No 72
>PRK08238 hypothetical protein; Validated
Probab=98.12 E-value=0.00018 Score=84.08 Aligned_cols=98 Identities=20% Similarity=0.264 Sum_probs=75.8
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
|++|++.+.++++++.|+++.++|+-+...+..+++.+|+.+ .++.+++ ..++.|+.|.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd---~Vigsd~------------------~~~~kg~~K~ 130 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFD---GVFASDG------------------TTNLKGAAKA 130 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC---EEEeCCC------------------ccccCCchHH
Confidence 578999999999999999999999999999999999999832 3333322 1145677786
Q ss_pred HHHHHHhhhCCCE-EEEEcCCccCHHhhhcCCcceeecCCCcHH
Q 002230 740 TLVKHLRTTLGEV-VAVTGDGTNDAPALHEADIGLAMGIAGTEV 782 (950)
Q Consensus 740 ~~V~~l~~~~g~~-v~~vGDG~ND~~al~~AdvGiamg~~g~~~ 782 (950)
..++... ++. +.++||..||.|+++.|+-.++++ .+...
T Consensus 131 ~~l~~~l---~~~~~~yvGDS~~Dlp~~~~A~~av~Vn-~~~~l 170 (479)
T PRK08238 131 AALVEAF---GERGFDYAGNSAADLPVWAAARRAIVVG-ASPGV 170 (479)
T ss_pred HHHHHHh---CccCeeEecCCHHHHHHHHhCCCeEEEC-CCHHH
Confidence 6555322 332 578899999999999999999997 44433
No 73
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.11 E-value=6.7e-06 Score=84.54 Aligned_cols=92 Identities=28% Similarity=0.330 Sum_probs=69.2
Q ss_pred ccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChh-h--HH
Q 002230 663 PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM-D--KH 739 (950)
Q Consensus 663 ~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~-~--K~ 739 (950)
|++.+.|+.++++|++++++||+....+.++++.+|+...+ ++....+.. ......++.+|. + |.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~--v~~~~~~~~----------~~~~~~~~~~~~~~~~K~ 159 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN--VIGNELFDN----------GGGIFTGRITGSNCGGKA 159 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG--EEEEEEECT----------TCCEEEEEEEEEEESHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE--EEEEeeeec----------ccceeeeeECCCCCCcHH
Confidence 78889999999999999999999999999999999997532 111110000 011244555554 4 99
Q ss_pred HHHHHH------hhhCCCEEEEEcCCccCHHhhh
Q 002230 740 TLVKHL------RTTLGEVVAVTGDGTNDAPALH 767 (950)
Q Consensus 740 ~~V~~l------~~~~g~~v~~vGDG~ND~~al~ 767 (950)
..++.+ +.. ...+.++|||.||.||||
T Consensus 160 ~~l~~~~~~~~~~~~-~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 160 EALKELYIRDEEDID-PDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHTHT-CCEEEEEESSGGGHHHHH
T ss_pred HHHHHHHHHhhcCCC-CCeEEEEECCHHHHHHhC
Confidence 999999 333 578999999999999986
No 74
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=98.06 E-value=2.8e-05 Score=82.03 Aligned_cols=127 Identities=24% Similarity=0.369 Sum_probs=94.8
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhh
Q 002230 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (950)
Q Consensus 658 ~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~ 737 (950)
...+-|++++++..|+++|++..++|+++...+..+.+..|+...-..++.+.... ...-.|..
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~----------------~~KP~P~~ 150 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVP----------------PPKPDPEP 150 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCC----------------CCCcCHHH
Confidence 45678999999999999999999999999999999999999976433333322211 11234555
Q ss_pred HHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCC---cceeecCC-CcHHHHhcCCEEeccCChhHHHHHH
Q 002230 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD---IGLAMGIA-GTEVAKESADVIILDDNFSTIVTVA 803 (950)
Q Consensus 738 K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~Ad---vGiamg~~-g~~~ak~~aDivl~~~~~~~i~~~i 803 (950)
...+.+.+... .+.++||||..+|+.|-++|+ ||+..|.+ +.+.....+|+++.+ +..+...+
T Consensus 151 l~~~~~~~~~~-~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~--~~el~~~l 217 (220)
T COG0546 151 LLLLLEKLGLD-PEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDS--LAELLALL 217 (220)
T ss_pred HHHHHHHhCCC-hhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECC--HHHHHHHH
Confidence 55555655544 357999999999999999998 77888743 455677779999955 77776654
No 75
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.03 E-value=2.7e-05 Score=82.38 Aligned_cols=43 Identities=12% Similarity=0.143 Sum_probs=38.8
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 002230 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (950)
Q Consensus 658 ~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~ 700 (950)
.+..-+++.++|++|++.|++++++||+....+..+.+++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 3455667999999999999999999999999999999999974
No 76
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=98.02 E-value=1.7e-05 Score=82.33 Aligned_cols=106 Identities=15% Similarity=0.159 Sum_probs=77.4
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC--CceeeeCc-ccccCCHHHHhhhhccccEE-eec
Q 002230 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD--NGIAIEGP-EFREKSDEELSKLIPKIQVM-ARS 733 (950)
Q Consensus 658 ~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~--~~~vi~g~-~~~~~~~~~~~~~~~~~~v~-ar~ 733 (950)
..+++|++.+.++.+++.|++++++||.....+..+++.+|+..- .......+ .+. .+ +. -.+
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~-----------g~--~~~~~~ 151 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYT-----------GN--IDGNNC 151 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEe-----------CC--ccCCCC
Confidence 456899999999999999999999999999999999999998531 00111000 000 00 00 123
Q ss_pred ChhhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeec
Q 002230 734 SPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMG 776 (950)
Q Consensus 734 ~P~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg 776 (950)
.++.|...++.+.+..+ +.+.++||+.+|.||++.|+.++++.
T Consensus 152 ~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 152 KGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred CChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 45788888877655424 36888999999999999999999875
No 77
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.01 E-value=1.3e-05 Score=81.28 Aligned_cols=97 Identities=23% Similarity=0.317 Sum_probs=70.3
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC--CceeeeCc-ccccCCHHHHhhhhccccEE--eecC
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD--NGIAIEGP-EFREKSDEELSKLIPKIQVM--ARSS 734 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~--~~~vi~g~-~~~~~~~~~~~~~~~~~~v~--ar~~ 734 (950)
+++|++.+.++.+++.|++++++||.....+..+++.+|+..- +....+.. .+.. + +. ..+.
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g-----------~--~~~~~~~~ 139 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLTG-----------P--IEGQVNPE 139 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEeC-----------c--cCCcccCC
Confidence 3689999999999999999999999999999999999998631 11111000 0000 0 00 1245
Q ss_pred hhhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcC
Q 002230 735 PMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEA 769 (950)
Q Consensus 735 P~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~A 769 (950)
+..|...++.+++..| +.+.++|||.||.+|++.|
T Consensus 140 ~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 140 GECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred cchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 6889999988765523 4688999999999999875
No 78
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=98.01 E-value=4e-05 Score=81.01 Aligned_cols=126 Identities=25% Similarity=0.382 Sum_probs=87.5
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecCh--h
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP--M 736 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P--~ 736 (950)
-++.||+.+.++.|++.|+++.++||........+.+..|+...-..++.++.. .+..| +
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~------------------~~~kp~~~ 153 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSL------------------PNKKPDPA 153 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCC------------------CCCCcChH
Confidence 457899999999999999999999999999999999999986432222222211 11223 2
Q ss_pred hHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCc-ceee--cCC-CcHHHHhcCCEEeccCChhHHHHHHHH
Q 002230 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI-GLAM--GIA-GTEVAKESADVIILDDNFSTIVTVAKW 805 (950)
Q Consensus 737 ~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~Adv-Giam--g~~-g~~~ak~~aDivl~~~~~~~i~~~i~~ 805 (950)
--..+++.++.. .+.+.++||+.||+.+.+.|++ +|.+ |.. ..+.....+|+++ +++..+...+.+
T Consensus 154 ~~~~~~~~~~~~-~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~ 223 (226)
T PRK13222 154 PLLLACEKLGLD-PEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGL 223 (226)
T ss_pred HHHHHHHHcCCC-hhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHH
Confidence 223344444433 3678899999999999999998 4444 311 2344456788888 458888877644
No 79
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=97.98 E-value=2.9e-05 Score=81.89 Aligned_cols=130 Identities=20% Similarity=0.196 Sum_probs=84.2
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC----ceeeeCcccccCCHHHHhhhhccccE--E-ee
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN----GIAIEGPEFREKSDEELSKLIPKIQV--M-AR 732 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~----~~vi~g~~~~~~~~~~~~~~~~~~~v--~-ar 732 (950)
+++||+.+.++.|++.|+++.++||-....+..+.+.+ +.... ....+|+.+.... |.-.. + .+
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~k--------p~p~~~~~~~~ 144 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITW--------PHPCDEHCQNH 144 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEec--------cCCcccccccc
Confidence 68999999999999999999999999999999999988 64311 1112232211000 00000 0 00
Q ss_pred cChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHh--cCCEEeccCChhHHHHHH
Q 002230 733 SSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKE--SADVIILDDNFSTIVTVA 803 (950)
Q Consensus 733 ~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~--~aDivl~~~~~~~i~~~i 803 (950)
+ ...|..+++.++.. ...+.|+|||.||.+|.++||+.++-+ .-.+.+++ .+.+.+ ++|..+...+
T Consensus 145 ~-~~~K~~~l~~~~~~-~~~~i~iGDs~~Di~aa~~Ag~~~a~~-~l~~~~~~~~~~~~~~--~~f~ei~~~l 212 (219)
T PRK09552 145 C-GCCKPSLIRKLSDT-NDFHIVIGDSITDLEAAKQADKVFARD-FLITKCEELGIPYTPF--ETFHDVQTEL 212 (219)
T ss_pred C-CCchHHHHHHhccC-CCCEEEEeCCHHHHHHHHHCCcceeHH-HHHHHHHHcCCCcccc--CCHHHHHHHH
Confidence 1 13488888888776 567899999999999999999977632 11122222 233333 4577777655
No 80
>PLN02382 probable sucrose-phosphatase
Probab=97.96 E-value=5.3e-05 Score=87.22 Aligned_cols=143 Identities=18% Similarity=0.174 Sum_probs=93.0
Q ss_pred CCccHHHHH-HHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC------c-eeeeCccccc------------------
Q 002230 661 MRPGVKESV-AICRSAGITVRMVTGDNINTAKAIARECGILTDN------G-IAIEGPEFRE------------------ 714 (950)
Q Consensus 661 lr~~~~~~I-~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~------~-~vi~g~~~~~------------------ 714 (950)
+.+...+++ +++++.|+.++++||+.......+.++.++..+. + .+..+.....
T Consensus 29 ~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~ 108 (413)
T PLN02382 29 LSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVV 108 (413)
T ss_pred hhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHH
Confidence 333344555 8899999999999999999999999999987653 1 1111110000
Q ss_pred -----C--------------------CHHH-------Hhhhhc----cccE------EeecCh--hhHHHHHHHHhhhC-
Q 002230 715 -----K--------------------SDEE-------LSKLIP----KIQV------MARSSP--MDKHTLVKHLRTTL- 749 (950)
Q Consensus 715 -----~--------------------~~~~-------~~~~~~----~~~v------~ar~~P--~~K~~~V~~l~~~~- 749 (950)
+ .++. +.+.+. .+.+ +....| ..|...++.|.+++
T Consensus 109 ~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~ 188 (413)
T PLN02382 109 EETSKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLK 188 (413)
T ss_pred HHHhcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhh
Confidence 0 0101 111111 1111 112233 57999999988776
Q ss_pred --C---CEEEEEcCCccCHHhhhcCC-cceeecCCCcHHHHhcC--------CEEec-cCChhHHHHHHH
Q 002230 750 --G---EVVAVTGDGTNDAPALHEAD-IGLAMGIAGTEVAKESA--------DVIIL-DDNFSTIVTVAK 804 (950)
Q Consensus 750 --g---~~v~~vGDG~ND~~al~~Ad-vGiamg~~g~~~ak~~a--------Divl~-~~~~~~i~~~i~ 804 (950)
| +.++++||+.||.+||+.|+ .||+|| |+.+..|+.+ +++.. +.+-.+|.++++
T Consensus 189 ~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~-NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~ 257 (413)
T PLN02382 189 AEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVS-NAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIG 257 (413)
T ss_pred hcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEc-CCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHH
Confidence 4 47889999999999999999 699999 8888877643 55543 334566777664
No 81
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=97.95 E-value=4e-05 Score=78.46 Aligned_cols=115 Identities=17% Similarity=0.168 Sum_probs=77.3
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEee-cChhh
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR-SSPMD 737 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar-~~P~~ 737 (950)
-+++|++.+.++.|++.|+++.++|+.+......+.+..|+..--..+++++.... ....+.-...++.++.. .....
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~-~~g~~~~~~~~~~~~~~~~~g~~ 149 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFD-NDGRHIVWPHHCHGCCSCPCGCC 149 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceEC-CCCcEEEecCCCCccCcCCCCCC
Confidence 37899999999999999999999999999999999999998542222332222110 00000000011111111 12246
Q ss_pred HHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCccee
Q 002230 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 774 (950)
Q Consensus 738 K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGia 774 (950)
|..+++.+++++.+.+.++|||.||..|.++||+-.|
T Consensus 150 K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 150 KGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred HHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 9999999876524678899999999999999987664
No 82
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=97.89 E-value=0.0001 Score=77.72 Aligned_cols=39 Identities=15% Similarity=0.201 Sum_probs=36.0
Q ss_pred CccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 002230 662 RPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (950)
Q Consensus 662 r~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~ 700 (950)
-+.++++|+.|+++|++++++||+....+..+.+++|+.
T Consensus 18 ~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 18 WQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred cHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 344899999999999999999999999999999999975
No 83
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.86 E-value=7.8e-05 Score=77.71 Aligned_cols=125 Identities=19% Similarity=0.267 Sum_probs=83.8
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.||+.+.++.|++.|+++.++|+.....+..+.+..|+..--+.++..++. ...+..|+-=.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~----------------~~~KP~~~~~~ 138 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEV----------------PRPKPAPDIVR 138 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcC----------------CCCCCChHHHH
Confidence 67899999999999999999999999999999999999985421122222110 01112222223
Q ss_pred HHHHHHhhhCCCEEEEEcCCccCHHhhhcCCccee---ecC-CCcHHHHhcCCEEeccCChhHHHHHH
Q 002230 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA---MGI-AGTEVAKESADVIILDDNFSTIVTVA 803 (950)
Q Consensus 740 ~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGia---mg~-~g~~~ak~~aDivl~~~~~~~i~~~i 803 (950)
.+++.++-. .+.++|+||+.+|..+-++|++... -|. ...+..++.+|+++.+ +..+..++
T Consensus 139 ~~~~~~~~~-~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~--~~~l~~~~ 203 (205)
T TIGR01454 139 EALRLLDVP-PEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRK--PQSLLALC 203 (205)
T ss_pred HHHHHcCCC-hhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCC--HHHHHHHh
Confidence 333334333 3679999999999999999998633 331 2223466789999844 66666544
No 84
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.85 E-value=3.9e-05 Score=73.38 Aligned_cols=114 Identities=20% Similarity=0.131 Sum_probs=75.1
Q ss_pred eccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecCh
Q 002230 656 GIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (950)
Q Consensus 656 ~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P 735 (950)
.-..++++++.+.++.|++.|++++++||.....+....+.+|+......++......................+.+..|
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNP 99 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCH
Confidence 44568999999999999999999999999999999999999998432222222111100000000000011113335556
Q ss_pred hhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCC
Q 002230 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD 770 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~Ad 770 (950)
..+..+.+.+... .+.+.++||+.||..|++.++
T Consensus 100 ~~~~~~~~~~~~~-~~~~~~igD~~~d~~~~~~~g 133 (139)
T cd01427 100 DKLLAALKLLGVD-PEEVLMVGDSLNDIEMAKAAG 133 (139)
T ss_pred HHHHHHHHHcCCC-hhhEEEeCCCHHHHHHHHHcC
Confidence 6666666666544 567899999999999999843
No 85
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=97.81 E-value=0.00015 Score=78.67 Aligned_cols=137 Identities=12% Similarity=0.234 Sum_probs=87.8
Q ss_pred CCCccHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCCc--cCCceee---eCcc-cccC-----------------
Q 002230 660 PMRPGVKESVAICRS-AGITVRMVTGDNINTAKAIARECGIL--TDNGIAI---EGPE-FREK----------------- 715 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~-aGi~v~m~TGD~~~ta~~ia~~~gi~--~~~~~vi---~g~~-~~~~----------------- 715 (950)
.+-+++.++|++|++ .|++++++||+....+..+.+.+++. ..++..+ .+.. ...+
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 455789999999998 79999999999999999888777632 2222111 0100 0000
Q ss_pred ---------------------C--HHHHhhh-------hccccE-----EeecCh--hhHHHHHHHHhhhCC---CEEEE
Q 002230 716 ---------------------S--DEELSKL-------IPKIQV-----MARSSP--MDKHTLVKHLRTTLG---EVVAV 755 (950)
Q Consensus 716 ---------------------~--~~~~~~~-------~~~~~v-----~ar~~P--~~K~~~V~~l~~~~g---~~v~~ 755 (950)
. ++.+.++ .+...+ +....| .+|...++.+.+.+| +.+++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 0 1111111 111111 112223 588888888776655 57888
Q ss_pred EcCCccCHHhhhcC----CcceeecCCCcHHHHhcCCEEeccCChhHHHHHH
Q 002230 756 TGDGTNDAPALHEA----DIGLAMGIAGTEVAKESADVIILDDNFSTIVTVA 803 (950)
Q Consensus 756 vGDG~ND~~al~~A----dvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i 803 (950)
+||+.||.+|++.+ +.||+|| ++. ..|++.+.+ ...+...+
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg-~a~----~~A~~~l~~--~~~v~~~L 240 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVG-TGA----TQASWRLAG--VPDVWSWL 240 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEEC-CCC----CcCeEeCCC--HHHHHHHH
Confidence 99999999999999 9999999 553 447787754 55555444
No 86
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.71 E-value=0.00018 Score=77.22 Aligned_cols=43 Identities=7% Similarity=0.034 Sum_probs=38.8
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCcc
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT 701 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~ 701 (950)
+..-+.+.++|++|++.||.++++||+.......+.+++|+..
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 3456779999999999999999999999999999999999853
No 87
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.59 E-value=0.00036 Score=76.14 Aligned_cols=124 Identities=18% Similarity=0.274 Sum_probs=81.8
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChh--
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM-- 736 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~-- 736 (950)
.++.|++.+.++.|++.|+++.++|+.+...+..+....|+...-+.++.+++. .+..|.
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~------------------~~~Kp~p~ 161 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTL------------------PQKKPDPA 161 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCC------------------CCCCCCcH
Confidence 468899999999999999999999999999999999988885422222222210 111221
Q ss_pred hHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcc-eee--cCC-CcHHHHhcCCEEeccCChhHHHHHH
Q 002230 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAM--GIA-GTEVAKESADVIILDDNFSTIVTVA 803 (950)
Q Consensus 737 ~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvG-iam--g~~-g~~~ak~~aDivl~~~~~~~i~~~i 803 (950)
-=..+.+.+.-. .+.++++||+.||+.+.+.|++. +.+ |-. ..+..+..+|+++. ++..+.+++
T Consensus 162 ~~~~~~~~~g~~-~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~--~l~el~~~~ 229 (272)
T PRK13223 162 ALLFVMKMAGVP-PSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVID--DLRALLPGC 229 (272)
T ss_pred HHHHHHHHhCCC-hhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEEC--CHHHHHHHH
Confidence 112233333222 35789999999999999999973 333 311 12234457999884 477666543
No 88
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.55 E-value=0.00032 Score=73.41 Aligned_cols=121 Identities=18% Similarity=0.258 Sum_probs=80.3
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChh--h
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM--D 737 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~--~ 737 (950)
++.|++.+.++.|++.|+++.++|+.+...+..+.+..|+...-+.++.+++. .+..|. -
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~------------------~~~Kp~p~~ 146 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSL------------------AQRKPHPDP 146 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCC------------------CCCCCChHH
Confidence 57899999999999999999999999999999999999986432222222211 112232 1
Q ss_pred HHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCccee-e--cCCC-cHHHHhcCCEEeccCChhHHHH
Q 002230 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA-M--GIAG-TEVAKESADVIILDDNFSTIVT 801 (950)
Q Consensus 738 K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGia-m--g~~g-~~~ak~~aDivl~~~~~~~i~~ 801 (950)
=..+.+.+... .+.++++||+.+|..+.+.|++... + |-.. .+.....+|+++.+ +..+..
T Consensus 147 ~~~~~~~~~~~-~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~--~~~l~~ 211 (213)
T TIGR01449 147 LLLAAERLGVA-PQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDS--LNELPP 211 (213)
T ss_pred HHHHHHHcCCC-hhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCC--HHHHHh
Confidence 12222333222 2568899999999999999998643 2 2111 12334568988744 665543
No 89
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.55 E-value=0.00039 Score=72.96 Aligned_cols=125 Identities=18% Similarity=0.186 Sum_probs=83.4
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.||+.+.++.|++.|+++.++|+.....+..+.+..|+..--..++.+++.. .....|+--.
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~----------------~~Kp~p~~~~ 145 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVE----------------HAKPDPEPVL 145 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCC----------------CCCCCcHHHH
Confidence 367999999999999999999999999999999999999864222232222110 0112233223
Q ss_pred HHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcc---eeecCCCc-HHHHhcCCEEeccCChhHHHHHH
Q 002230 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG---LAMGIAGT-EVAKESADVIILDDNFSTIVTVA 803 (950)
Q Consensus 740 ~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvG---iamg~~g~-~~ak~~aDivl~~~~~~~i~~~i 803 (950)
.+.+.+... .+.++++||+.+|..+-++|++- +.-|.... +.....+|+++.+ +..+.+++
T Consensus 146 ~~~~~~~~~-~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~--~~~l~~~i 210 (214)
T PRK13288 146 KALELLGAK-PEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDK--MSDLLAIV 210 (214)
T ss_pred HHHHHcCCC-HHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECC--HHHHHHHH
Confidence 334443322 35688999999999999999984 33341122 2334568988754 77777654
No 90
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=97.55 E-value=0.00037 Score=82.85 Aligned_cols=40 Identities=8% Similarity=0.179 Sum_probs=36.3
Q ss_pred CCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 002230 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (950)
Q Consensus 661 lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~ 700 (950)
.-+.+.++|++|+++|+.++++||+....+..+++++|+.
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 3356799999999999999999999999999999999974
No 91
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=97.44 E-value=0.00053 Score=71.32 Aligned_cols=116 Identities=23% Similarity=0.408 Sum_probs=77.7
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcC--CccCCceee-e-Cccc-cc--------------------
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECG--ILTDNGIAI-E-GPEF-RE-------------------- 714 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~g--i~~~~~~vi-~-g~~~-~~-------------------- 714 (950)
++.+.+.+++++|++.|++++++||+....+..+.++++ +...++..+ . +... ..
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYIEPSDVFEEILGIKEEIGAELK 96 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEEcccccHHHHHHhhhhcCceee
Confidence 477899999999999999999999999999999998754 223333211 1 1100 00
Q ss_pred -C---------------------C----HH---HHhhhh-------ccccEEe------ecCh--hhHHHHHHHHhhhCC
Q 002230 715 -K---------------------S----DE---ELSKLI-------PKIQVMA------RSSP--MDKHTLVKHLRTTLG 750 (950)
Q Consensus 715 -~---------------------~----~~---~~~~~~-------~~~~v~a------r~~P--~~K~~~V~~l~~~~g 750 (950)
+ . +. ++.+.+ +.+.+.. ...| .+|...++.+.+++|
T Consensus 97 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~~~~~ 176 (204)
T TIGR01484 97 SLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQALLKELN 176 (204)
T ss_pred eeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhccccCcEEEEEecCCEEEEecCCCChHHHHHHHHHHhC
Confidence 0 0 00 000000 1122221 1223 789999999877655
Q ss_pred ---CEEEEEcCCccCHHhhhcCCcceee
Q 002230 751 ---EVVAVTGDGTNDAPALHEADIGLAM 775 (950)
Q Consensus 751 ---~~v~~vGDG~ND~~al~~AdvGiam 775 (950)
+.++++||+.||.+|++.+++|+||
T Consensus 177 ~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 177 GKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred CCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 4689999999999999999999997
No 92
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=97.42 E-value=0.00068 Score=71.98 Aligned_cols=127 Identities=18% Similarity=0.199 Sum_probs=86.0
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.||+.+.++.|++.|+++.++|+.+...+..+-+..|+...-..++.+.+.. .....|+-=.
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~----------------~~KP~p~~~~ 158 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLA----------------ERKPHPLPLL 158 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCC----------------CCCCCHHHHH
Confidence 578999999999999999999999999998888889999864322333332210 1122333233
Q ss_pred HHHHHHhhhCCCEEEEEcCCccCHHhhhcCCccee---ecCC-Cc-HHHHhcCCEEeccCChhHHHHHHHH
Q 002230 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA---MGIA-GT-EVAKESADVIILDDNFSTIVTVAKW 805 (950)
Q Consensus 740 ~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGia---mg~~-g~-~~ak~~aDivl~~~~~~~i~~~i~~ 805 (950)
.+++.+.-. .+.++|+||+.||..|-+.|++... -|-. .. +.....+|+++.+ +..+.+.+.|
T Consensus 159 ~~~~~l~~~-p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~--~~el~~~~~~ 226 (229)
T PRK13226 159 VAAERIGVA-PTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQ--PQLLWNPATW 226 (229)
T ss_pred HHHHHhCCC-hhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCC--HHHHHHHhcC
Confidence 444444433 4679999999999999999998642 2311 11 1234568999854 7777766554
No 93
>PTZ00174 phosphomannomutase; Provisional
Probab=97.40 E-value=0.00049 Score=73.96 Aligned_cols=53 Identities=23% Similarity=0.332 Sum_probs=42.2
Q ss_pred hhHHHHHHHHhhhCCCEEEEEcC----CccCHHhhhcC-CcceeecCCCcHHHHhcCCEE
Q 002230 736 MDKHTLVKHLRTTLGEVVAVTGD----GTNDAPALHEA-DIGLAMGIAGTEVAKESADVI 790 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g~~v~~vGD----G~ND~~al~~A-dvGiamg~~g~~~ak~~aDiv 790 (950)
.+|..-++.|.++ .+.|+++|| |.||.+||+.| -.|++++ ++.+..|..+.++
T Consensus 187 vsKg~al~~L~~~-~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~~~ 244 (247)
T PTZ00174 187 WDKTYCLRHLEND-FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKELF 244 (247)
T ss_pred CcHHHHHHHHHhh-hhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHHHh
Confidence 5788888888877 577888999 99999999976 5667767 8888877766544
No 94
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.31 E-value=0.0028 Score=68.26 Aligned_cols=134 Identities=16% Similarity=0.211 Sum_probs=83.9
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEee-cCh--
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR-SSP-- 735 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar-~~P-- 735 (950)
-++|||+.+.++.|++.|+++.++||-....+..+.++.|+...+..++... +..-.+. +... ..|
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~-L~f~~dG----------vltG~~~P~i 188 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNF-MDFDEDG----------VLKGFKGPLI 188 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeee-EEECCCC----------eEeCCCCCcc
Confidence 4679999999999999999999999999999999999999865443221110 0000000 1110 111
Q ss_pred --hhHHHHHH-HHhhhCC-----CEEEEEcCCccCHHhhhcC-C--cceeecC-CC-c----HHHHhcCCEEeccCChhH
Q 002230 736 --MDKHTLVK-HLRTTLG-----EVVAVTGDGTNDAPALHEA-D--IGLAMGI-AG-T----EVAKESADVIILDDNFST 798 (950)
Q Consensus 736 --~~K~~~V~-~l~~~~g-----~~v~~vGDG~ND~~al~~A-d--vGiamg~-~g-~----~~ak~~aDivl~~~~~~~ 798 (950)
..|...+. ...+.++ ..|.++|||.||++|..-. . --+.+|- +. . +.-+++=|||+.+|.=..
T Consensus 189 ~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~~D~t~~ 268 (277)
T TIGR01544 189 HTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQDETLE 268 (277)
T ss_pred cccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEECCCCch
Confidence 35555443 2222222 5788999999999996533 1 1122221 11 1 225678899999988777
Q ss_pred HHHHH
Q 002230 799 IVTVA 803 (950)
Q Consensus 799 i~~~i 803 (950)
++..|
T Consensus 269 v~~~i 273 (277)
T TIGR01544 269 VANSI 273 (277)
T ss_pred HHHHH
Confidence 77654
No 95
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.28 E-value=0.00096 Score=70.44 Aligned_cols=120 Identities=17% Similarity=0.255 Sum_probs=80.0
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhH
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (950)
-++.||+.++++.|++.|+++.++|+........+.+..||..--..++.+.+. ....|...
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~------------------~~~Kp~~~ 152 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKL------------------PYSKPHPE 152 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccC------------------CCCCCCHH
Confidence 357899999999999999999999999999999999999986533333333221 01123221
Q ss_pred HHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCc---HHHHhcCCEEeccCChhHHH
Q 002230 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGT---EVAKESADVIILDDNFSTIV 800 (950)
Q Consensus 739 ~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~---~~ak~~aDivl~~~~~~~i~ 800 (950)
-+.+.+++. | +.++++||..||+.+-+.|++....-..+. +.-...+|+++.+ |..+.
T Consensus 153 -~~~~~~~~~-~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~--~~dl~ 216 (222)
T PRK10826 153 -VYLNCAAKL-GVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLES--LTELT 216 (222)
T ss_pred -HHHHHHHHc-CCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccC--HHHHh
Confidence 222333332 4 568999999999999999998654321221 2223357877743 66554
No 96
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=97.25 E-value=0.0021 Score=69.95 Aligned_cols=119 Identities=16% Similarity=0.229 Sum_probs=81.2
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.||+.+.++.|++.|+++.++|+.+...+..+.+.+|+...-..++.+++ .+ .|.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~----------------------~~-~k~ 198 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTP----------------------IL-SKR 198 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCC----------------------CC-CCH
Confidence 5679999999999999999999999999999999999998643222332221 11 122
Q ss_pred HHHH-HHhhh--CCCEEEEEcCCccCHHhhhcCCccee---ecCCCc-HHHHhcCCEEeccCChhHHHHHH
Q 002230 740 TLVK-HLRTT--LGEVVAVTGDGTNDAPALHEADIGLA---MGIAGT-EVAKESADVIILDDNFSTIVTVA 803 (950)
Q Consensus 740 ~~V~-~l~~~--~g~~v~~vGDG~ND~~al~~AdvGia---mg~~g~-~~ak~~aDivl~~~~~~~i~~~i 803 (950)
.... .+++. ..+.++|+||+.+|+.+-++|++-.. -|.... +.....+|+++. ++..+.+++
T Consensus 199 ~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~--~~~eL~~~~ 267 (273)
T PRK13225 199 RALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLE--TPSDLLQAV 267 (273)
T ss_pred HHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEEC--CHHHHHHHH
Confidence 2222 22222 03568999999999999999998533 231111 123456899884 477777654
No 97
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=97.15 E-value=0.0024 Score=66.73 Aligned_cols=107 Identities=13% Similarity=0.125 Sum_probs=74.3
Q ss_pred CCCccHHHHHH-HHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhH
Q 002230 660 PMRPGVKESVA-ICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (950)
Q Consensus 660 ~lr~~~~~~I~-~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (950)
.++|++.+.|+ .+++.|++++++|+-....+..+|+..|+..... ++ |.++..... .++ .-..|.-++|
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~-~i-~t~le~~~g-------g~~-~g~~c~g~~K 163 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLN-LI-ASQIERGNG-------GWV-LPLRCLGHEK 163 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCc-EE-EEEeEEeCC-------ceE-cCccCCChHH
Confidence 46899999996 7888999999999999999999999966643211 22 222221000 000 1123666899
Q ss_pred HHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeec
Q 002230 739 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMG 776 (950)
Q Consensus 739 ~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg 776 (950)
..-++..-....+...+-||+.||.|||+.||.+++++
T Consensus 164 v~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 164 VAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred HHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 88777543211244556799999999999999999885
No 98
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=97.15 E-value=0.0024 Score=67.22 Aligned_cols=124 Identities=23% Similarity=0.287 Sum_probs=82.0
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCc--cCCceeeeCcccccCCHHHHhhhhccccEEeecCh-
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL--TDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP- 735 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~--~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P- 735 (950)
.++.||+.+.++.|++.|+++.++|+-....+..+.+..|+. ..-..++.+.+.. +..|
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~------------------~~KP~ 147 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVA------------------AGRPA 147 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCC------------------CCCCC
Confidence 478999999999999999999999999999999999999986 3223333333211 1223
Q ss_pred -hhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeec-CCCc---H-HHHhcCCEEeccCChhHHHHH
Q 002230 736 -MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMG-IAGT---E-VAKESADVIILDDNFSTIVTV 802 (950)
Q Consensus 736 -~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg-~~g~---~-~ak~~aDivl~~~~~~~i~~~ 802 (950)
+-=....+.+.-...+.++|+||+.+|+.+-+.|++..+++ ..|. + .....+|+++.+ +..+..+
T Consensus 148 p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~~--~~~l~~~ 218 (220)
T TIGR03351 148 PDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLDS--VADLPAL 218 (220)
T ss_pred HHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeecC--HHHHHHh
Confidence 21122222222110256999999999999999999986221 1322 1 223457887743 6665543
No 99
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=97.10 E-value=0.0052 Score=76.57 Aligned_cols=169 Identities=17% Similarity=0.233 Sum_probs=102.2
Q ss_pred HHHHHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeec--cCCCCccHHHHHHHHHH-CCCEEEEEcCCCHH
Q 002230 612 LNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGI--KDPMRPGVKESVAICRS-AGITVRMVTGDNIN 688 (950)
Q Consensus 612 ~~~~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i--~D~lr~~~~~~I~~l~~-aGi~v~m~TGD~~~ 688 (950)
++.....|.+...|.+++-| |.|++....- ...+.+++.+++++|.+ .|+.|+++||+...
T Consensus 480 ~~~~~~~y~~~~~rLi~~D~----------------DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~ 543 (726)
T PRK14501 480 AEEIIARYRAASRRLLLLDY----------------DGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRD 543 (726)
T ss_pred HHHHHHHHHhccceEEEEec----------------CccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHH
Confidence 34555666555567666543 3444432111 12366899999999999 69999999999999
Q ss_pred HHHHHHHHcCC--ccCCceeee--CcccccC-----------------------------------------CH------
Q 002230 689 TAKAIARECGI--LTDNGIAIE--GPEFREK-----------------------------------------SD------ 717 (950)
Q Consensus 689 ta~~ia~~~gi--~~~~~~vi~--g~~~~~~-----------------------------------------~~------ 717 (950)
.........++ ..+++..+. |..+... ++
T Consensus 544 ~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~ 623 (726)
T PRK14501 544 TLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEAR 623 (726)
T ss_pred HHHHHhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHH
Confidence 88887665552 223332221 1111000 00
Q ss_pred -HHHhhhh----c--cccEE-------eecChhhHHHHHHHHhhhCC-CEEEEEcCCccCHHhhhcC---CcceeecCCC
Q 002230 718 -EELSKLI----P--KIQVM-------ARSSPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHEA---DIGLAMGIAG 779 (950)
Q Consensus 718 -~~~~~~~----~--~~~v~-------ar~~P~~K~~~V~~l~~~~g-~~v~~vGDG~ND~~al~~A---dvGiamg~~g 779 (950)
+++.+.+ . .+.+. .+..-.+|...++.+.+..+ ..++++||+.||.+|++.+ +.+++|| ++
T Consensus 624 a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG-~~ 702 (726)
T PRK14501 624 ANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVG-PG 702 (726)
T ss_pred HHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEEC-CC
Confidence 0111111 0 11111 12223689988888876522 5799999999999999986 6889998 43
Q ss_pred cHHHHhcCCEEeccCChhHHHHHH
Q 002230 780 TEVAKESADVIILDDNFSTIVTVA 803 (950)
Q Consensus 780 ~~~ak~~aDivl~~~~~~~i~~~i 803 (950)
+.+|++.+.+ -..+.+++
T Consensus 703 ----~s~A~~~l~~--~~eV~~~L 720 (726)
T PRK14501 703 ----ESRARYRLPS--QREVRELL 720 (726)
T ss_pred ----CCcceEeCCC--HHHHHHHH
Confidence 5678898875 34555544
No 100
>PRK11590 hypothetical protein; Provisional
Probab=97.09 E-value=0.0036 Score=65.56 Aligned_cols=105 Identities=16% Similarity=0.100 Sum_probs=74.2
Q ss_pred CCCccHHHHH-HHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccE-EeecChhh
Q 002230 660 PMRPGVKESV-AICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQV-MARSSPMD 737 (950)
Q Consensus 660 ~lr~~~~~~I-~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v-~ar~~P~~ 737 (950)
.++|++.+.| +.+++.|++++++|+-....+..+++.+|+.... .++ |.++... ....+ -..|.-+.
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~-~~i-~t~l~~~---------~tg~~~g~~c~g~~ 163 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRV-NLI-ASQMQRR---------YGGWVLTLRCLGHE 163 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccC-ceE-EEEEEEE---------EccEECCccCCChH
Confidence 4589999999 5788899999999999999999999999963211 122 2222110 00001 12366689
Q ss_pred HHHHHHHH-hhhCCCEEEEEcCCccCHHhhhcCCcceeec
Q 002230 738 KHTLVKHL-RTTLGEVVAVTGDGTNDAPALHEADIGLAMG 776 (950)
Q Consensus 738 K~~~V~~l-~~~~g~~v~~vGDG~ND~~al~~AdvGiamg 776 (950)
|..-++.. ... .....+-||+.||.|||+.|+.+++++
T Consensus 164 K~~~l~~~~~~~-~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 164 KVAQLERKIGTP-LRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred HHHHHHHHhCCC-cceEEEecCCcccHHHHHhCCCCEEEC
Confidence 98877754 322 344556699999999999999999885
No 101
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=97.08 E-value=0.0031 Score=68.01 Aligned_cols=94 Identities=19% Similarity=0.197 Sum_probs=67.3
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhhhccccEEeecChhhH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~-~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (950)
++.||+.+.++.|++.|+++.++|+.....+..+-+..|+..-- +.++.+++. .+..|. .
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~------------------~~~KP~-p 159 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDV------------------PAGRPA-P 159 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccC------------------CCCCCC-H
Confidence 46789999999999999999999999999999999999986431 333333321 112332 2
Q ss_pred HHHHHHHhhh---CCCEEEEEcCCccCHHhhhcCCcc
Q 002230 739 HTLVKHLRTT---LGEVVAVTGDGTNDAPALHEADIG 772 (950)
Q Consensus 739 ~~~V~~l~~~---~g~~v~~vGDG~ND~~al~~AdvG 772 (950)
..+.+.+++. ..+.++||||..+|+.+-+.|++-
T Consensus 160 ~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 160 WMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred HHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 2333344333 024589999999999999999974
No 102
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=97.07 E-value=0.0034 Score=67.91 Aligned_cols=122 Identities=13% Similarity=0.164 Sum_probs=81.5
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.||+.+.++.|++.|+++.++|+.....+..+-+.+|+..--..++.+.+.. .....|+-=.
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~----------------~~KP~Pe~~~ 172 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVY----------------RGKPDPEMFM 172 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCC----------------CCCCCHHHHH
Confidence 468999999999999999999999999999999999999865434455554321 0112222222
Q ss_pred HHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcce-eecCCCcHHHHhcCCEEeccCChhHHH
Q 002230 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL-AMGIAGTEVAKESADVIILDDNFSTIV 800 (950)
Q Consensus 740 ~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGi-amg~~g~~~ak~~aDivl~~~~~~~i~ 800 (950)
..++.+.-. .+.++|+||..+|+.+-+.|++-. ++...+.......+|+++.+ +..+.
T Consensus 173 ~a~~~l~~~-p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~--~~el~ 231 (260)
T PLN03243 173 YAAERLGFI-PERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRR--LDDLS 231 (260)
T ss_pred HHHHHhCCC-hHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCC--HHHHH
Confidence 333333333 356899999999999999999843 22212222223457888744 55544
No 103
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=97.07 E-value=0.0034 Score=67.53 Aligned_cols=117 Identities=15% Similarity=0.114 Sum_probs=80.2
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.||+.+.++.|++.|+++.++|+-....+..+-+.+|+..--..++.+++.. .....|+-=.
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~----------------~~KP~p~~~~ 171 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECE----------------HAKPHPDPYL 171 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCC----------------CCCCChHHHH
Confidence 468899999999999999999999999999999999999875333444444321 0122233333
Q ss_pred HHHHHHhhhCCCEEEEEcCCccCHHhhhcCCccee-e--cCCCcHHHHhcCCEEecc
Q 002230 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA-M--GIAGTEVAKESADVIILD 793 (950)
Q Consensus 740 ~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGia-m--g~~g~~~ak~~aDivl~~ 793 (950)
...+.++-. .+.++|+||..+|+.+-++|++-.. + |....+.....+|+++.+
T Consensus 172 ~a~~~~~~~-~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~ 227 (248)
T PLN02770 172 KALEVLKVS-KDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKD 227 (248)
T ss_pred HHHHHhCCC-hhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEecc
Confidence 344444433 3668999999999999999998532 2 211112234468888855
No 104
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=97.07 E-value=0.0026 Score=68.32 Aligned_cols=69 Identities=22% Similarity=0.269 Sum_probs=45.6
Q ss_pred hhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceeecCCCcHH-----HHhc---CCE-EeccCChhHHHHHH
Q 002230 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEV-----AKES---ADV-IILDDNFSTIVTVA 803 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~-----ak~~---aDi-vl~~~~~~~i~~~i 803 (950)
..|...|+.|++++| +.|.++||+.||.+||..++-||.+| |+.+. .... ..+ .-....-.+|.+.+
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~-Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl 242 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVG-NAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGL 242 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-T-TS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEc-CCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHH
Confidence 789999999988765 35677899999999999999999999 66655 2221 223 33344455666666
Q ss_pred HH
Q 002230 804 KW 805 (950)
Q Consensus 804 ~~ 805 (950)
+|
T Consensus 243 ~~ 244 (247)
T PF05116_consen 243 QH 244 (247)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 105
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=97.04 E-value=0.0038 Score=67.92 Aligned_cols=122 Identities=16% Similarity=0.178 Sum_probs=80.7
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhhhccccEEeecChhhH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~-~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (950)
++-||+.+.++.|++.|+++.++||.....+..+-+..|+..-. +.++.+++. ....|. .
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~------------------~~~KP~-p 161 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDV------------------PAGRPY-P 161 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcC------------------CCCCCC-h
Confidence 46789999999999999999999999999888888887765321 223322221 111232 2
Q ss_pred HHHHHHHhhhCC----CEEEEEcCCccCHHhhhcCCc---ceeecCCC------------------------cHHHHhcC
Q 002230 739 HTLVKHLRTTLG----EVVAVTGDGTNDAPALHEADI---GLAMGIAG------------------------TEVAKESA 787 (950)
Q Consensus 739 ~~~V~~l~~~~g----~~v~~vGDG~ND~~al~~Adv---Giamg~~g------------------------~~~ak~~a 787 (950)
.-+.+.+++. | +.++||||+.+|+.+-+.|++ |+.-|... .+.....+
T Consensus 162 ~~~~~a~~~l-~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a 240 (267)
T PRK13478 162 WMALKNAIEL-GVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAGA 240 (267)
T ss_pred HHHHHHHHHc-CCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcCC
Confidence 2233334333 3 468999999999999999997 44444110 12234568
Q ss_pred CEEeccCChhHHHHHH
Q 002230 788 DVIILDDNFSTIVTVA 803 (950)
Q Consensus 788 Divl~~~~~~~i~~~i 803 (950)
|+++.+ +..+...+
T Consensus 241 ~~vi~~--~~~l~~~l 254 (267)
T PRK13478 241 HYVIDT--IADLPAVI 254 (267)
T ss_pred Ceehhh--HHHHHHHH
Confidence 888844 77776654
No 106
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=97.04 E-value=0.0018 Score=67.03 Aligned_cols=94 Identities=18% Similarity=0.082 Sum_probs=68.0
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhh
Q 002230 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (950)
Q Consensus 658 ~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~ 737 (950)
.+++.+++.++++.|++.|+++.++||.....+..+.+.+|+..--..++.+++ +..+..|+-
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~-----------------~~~KP~p~~ 166 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMED-----------------CPPKPNPEP 166 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecC-----------------CCCCcCHHH
Confidence 455677889999999999999999999999999999999998643333333322 112334444
Q ss_pred HHHHHHHHhhhCCCEEEEEcCCccCHHhhhcC
Q 002230 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEA 769 (950)
Q Consensus 738 K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~A 769 (950)
-..+.+.+.-. .+.++|+||+.+|+.+-+.|
T Consensus 167 ~~~~~~~~~~~-~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 167 LILAAKALGVE-ACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHhCcC-cccEEEEeCCHHHHHHHHhC
Confidence 44555555444 46789999999999887654
No 107
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=96.88 E-value=0.0095 Score=60.31 Aligned_cols=141 Identities=22% Similarity=0.275 Sum_probs=92.0
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccc--------------------cCCHHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFR--------------------EKSDEE 719 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~--------------------~~~~~~ 719 (950)
.+-||+.++.+.+++. ...+++|-...+-+.++|..+|+...+-.+ +--+++ .++.++
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~-Te~~lD~~~~PeeeR~E~L~~~~~~~~~~gee 160 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHG-TEVDLDSIAVPEEEREELLSIIDVIASLSGEE 160 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCcccccc-ccccCccccCChHHHHHHHHhcCccccccHHH
Confidence 4568999999999876 566777777888899999999996532100 000011 011111
Q ss_pred HhhhhccccEEeecCh---------------hhHHHHHHHHhhhCC--CEEEEEcCCccCHHhhhcCC-c-ceeecCCCc
Q 002230 720 LSKLIPKIQVMARSSP---------------MDKHTLVKHLRTTLG--EVVAVTGDGTNDAPALHEAD-I-GLAMGIAGT 780 (950)
Q Consensus 720 ~~~~~~~~~v~ar~~P---------------~~K~~~V~~l~~~~g--~~v~~vGDG~ND~~al~~Ad-v-Giamg~~g~ 780 (950)
+.+.+.. +|.|..| ..|+++++.+.+.-+ ...+++||++.|..||+++. - |+|+.-||.
T Consensus 161 lfe~lDe--~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGN 238 (315)
T COG4030 161 LFEKLDE--LFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGN 238 (315)
T ss_pred HHHHHHH--HHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCC
Confidence 1111111 3445555 345566665554422 34678899999999999884 2 366666899
Q ss_pred HHHHhcCCEEeccCChhHHHHHHH
Q 002230 781 EVAKESADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 781 ~~ak~~aDivl~~~~~~~i~~~i~ 804 (950)
+-|...||+.+...+..+...+|.
T Consensus 239 eYal~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 239 EYALKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred cccccccceEEeccchhhhhHHHH
Confidence 999999999999888888777764
No 108
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.79 E-value=0.0032 Score=66.68 Aligned_cols=88 Identities=19% Similarity=0.243 Sum_probs=63.4
Q ss_pred CCccHHHHHHHHHHCCCEEEEEcCC----CHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChh
Q 002230 661 MRPGVKESVAICRSAGITVRMVTGD----NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 736 (950)
Q Consensus 661 lr~~~~~~I~~l~~aGi~v~m~TGD----~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~ 736 (950)
+.+++.+.++.++++|+++.++|+. ...++..+.+.+|+......++.++... ...|
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~------------------~~Kp- 175 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPG------------------QYQY- 175 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCC------------------CCCC-
Confidence 4445999999999999999999998 7779999999999965333333333211 0112
Q ss_pred hHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcc
Q 002230 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 772 (950)
Q Consensus 737 ~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvG 772 (950)
+|. ..+++. | .++|+||..||..+-++|++-
T Consensus 176 ~~~---~~l~~~-~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 176 TKT---QWIQDK-N-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred CHH---HHHHhC-C-CeEEEeCCHHHHHHHHHCCCC
Confidence 233 234444 5 478999999999999999874
No 109
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=96.75 E-value=0.0088 Score=70.46 Aligned_cols=123 Identities=15% Similarity=0.118 Sum_probs=83.6
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.||+.+.++.|++.|+++.++|+.....+..+.+.+|+..--..++.+++.. ....|+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~-----------------~~~kP~--- 389 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQIN-----------------SLNKSD--- 389 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCC-----------------CCCCcH---
Confidence 678999999999999999999999999999999999999865323344443311 112332
Q ss_pred HHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcc-eeecC-CCcHHHHhcCCEEeccCChhHHHHHHH
Q 002230 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMGI-AGTEVAKESADVIILDDNFSTIVTVAK 804 (950)
Q Consensus 740 ~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvG-iamg~-~g~~~ak~~aDivl~~~~~~~i~~~i~ 804 (950)
.+...+++..-+.+.++||+.+|+.+-+.|++- |.+.- .+.+.....+|+++.+ +..+.+++.
T Consensus 390 ~~~~al~~l~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~--l~el~~~l~ 454 (459)
T PRK06698 390 LVKSILNKYDIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVIDD--LLELKGILS 454 (459)
T ss_pred HHHHHHHhcCcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeCC--HHHHHHHHH
Confidence 222233322135799999999999999999984 33321 1222223458998844 777776553
No 110
>PRK11587 putative phosphatase; Provisional
Probab=96.67 E-value=0.0095 Score=62.69 Aligned_cols=113 Identities=16% Similarity=0.170 Sum_probs=74.0
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecCh--hh
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP--MD 737 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P--~~ 737 (950)
++.||+.+.++.|+++|+++.++|+.....+...-+..|+.. ...++++++. .+..| +-
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~-~~~i~~~~~~------------------~~~KP~p~~ 143 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPA-PEVFVTAERV------------------KRGKPEPDA 143 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCC-ccEEEEHHHh------------------cCCCCCcHH
Confidence 478999999999999999999999988777777777777732 2223332221 11233 22
Q ss_pred HHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcc-eeecCCCc-HHHHhcCCEEecc
Q 002230 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMGIAGT-EVAKESADVIILD 793 (950)
Q Consensus 738 K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvG-iamg~~g~-~~ak~~aDivl~~ 793 (950)
=....+.+.-. .+.++|+||..+|+.+-+.|++. |++. .+. ......+|+++.+
T Consensus 144 ~~~~~~~~g~~-p~~~l~igDs~~di~aA~~aG~~~i~v~-~~~~~~~~~~~~~~~~~ 199 (218)
T PRK11587 144 YLLGAQLLGLA-PQECVVVEDAPAGVLSGLAAGCHVIAVN-APADTPRLDEVDLVLHS 199 (218)
T ss_pred HHHHHHHcCCC-cccEEEEecchhhhHHHHHCCCEEEEEC-CCCchhhhccCCEEecc
Confidence 22333333333 36799999999999999999984 4443 332 2233457877644
No 111
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=96.65 E-value=0.0093 Score=59.24 Aligned_cols=103 Identities=17% Similarity=0.239 Sum_probs=68.4
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHH---HHHHHc---C--CccCCceeee-CcccccCCHHHHhhhhcccc
Q 002230 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAK---AIAREC---G--ILTDNGIAIE-GPEFREKSDEELSKLIPKIQ 728 (950)
Q Consensus 658 ~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~---~ia~~~---g--i~~~~~~vi~-g~~~~~~~~~~~~~~~~~~~ 728 (950)
+|.+.|++++++++++++|++++++||+....+. ....++ | +.. ..++.. |..+..... .
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~-g~li~~~g~~~~~~~~----------e 93 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH-GPVLLSPDRLFAALHR----------E 93 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC-ceEEEcCCcchhhhhc----------c
Confidence 5788999999999999999999999999988874 555552 3 321 122222 221111100 0
Q ss_pred EEeecChh-hHHHHHHHHhhhC----CCEEEEEcCCccCHHhhhcCCcc
Q 002230 729 VMARSSPM-DKHTLVKHLRTTL----GEVVAVTGDGTNDAPALHEADIG 772 (950)
Q Consensus 729 v~ar~~P~-~K~~~V~~l~~~~----g~~v~~vGDG~ND~~al~~AdvG 772 (950)
+. ...|+ .|...++.+++.+ ...++..||+.+|+.+-++++|-
T Consensus 94 ~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 94 VI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred cc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 22 22343 4888888777632 36778899999999999987654
No 112
>PRK06769 hypothetical protein; Validated
Probab=96.57 E-value=0.0092 Score=60.38 Aligned_cols=112 Identities=15% Similarity=-0.034 Sum_probs=63.7
Q ss_pred CceEEEeeeeccC----CCCccHHHHHHHHHHCCCEEEEEcCCCHH--------HHHHHHHHcCCccCCceeeeCccccc
Q 002230 647 EGYTCIGIVGIKD----PMRPGVKESVAICRSAGITVRMVTGDNIN--------TAKAIARECGILTDNGIAIEGPEFRE 714 (950)
Q Consensus 647 ~~l~~lG~~~i~D----~lr~~~~~~I~~l~~aGi~v~m~TGD~~~--------ta~~ia~~~gi~~~~~~vi~g~~~~~ 714 (950)
.|.++.|-..+.+ ++-||+.+.++.|++.|+++.++|+.... ......+..|+.. ++.+.....
T Consensus 11 ~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~----~~~~~~~~~ 86 (173)
T PRK06769 11 RDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDD----IYLCPHKHG 86 (173)
T ss_pred CCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCE----EEECcCCCC
Confidence 4445544433332 36899999999999999999999987631 2233344556532 111000000
Q ss_pred CCHHHHhhhhccccEEeecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCccee
Q 002230 715 KSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 774 (950)
Q Consensus 715 ~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGia 774 (950)
.-.-..+..|+-=..+++.+... -+.+.|+||..+|+.+-++|++-..
T Consensus 87 -----------~~~~~~KP~p~~~~~~~~~l~~~-p~~~i~IGD~~~Di~aA~~aGi~~i 134 (173)
T PRK06769 87 -----------DGCECRKPSTGMLLQAAEKHGLD-LTQCAVIGDRWTDIVAAAKVNATTI 134 (173)
T ss_pred -----------CCCCCCCCCHHHHHHHHHHcCCC-HHHeEEEcCCHHHHHHHHHCCCeEE
Confidence 00000112222223334444322 3579999999999999999998543
No 113
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=96.53 E-value=0.014 Score=65.81 Aligned_cols=118 Identities=17% Similarity=0.198 Sum_probs=81.1
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChh--h
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM--D 737 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~--~ 737 (950)
++.||+.+.++.|++.|+++.++|+.+...+..+-+..||..--+.++.+++.. +..|. -
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~------------------~~KP~Pei 277 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVY------------------RGKPDPEM 277 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCC------------------CCCCCHHH
Confidence 467999999999999999999999999999999999999865333444443311 12332 2
Q ss_pred HHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCccee-ecCCCcHHH-HhcCCEEeccCChhHH
Q 002230 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA-MGIAGTEVA-KESADVIILDDNFSTI 799 (950)
Q Consensus 738 K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGia-mg~~g~~~a-k~~aDivl~~~~~~~i 799 (950)
=...++.+.-. .+.++|+||..+|+.|-+.|++-.. +. .+.... ...+|+++.+ +..+
T Consensus 278 fl~A~~~lgl~-Peecl~IGDS~~DIeAAk~AGm~~IgV~-~~~~~~~l~~Ad~iI~s--~~EL 337 (381)
T PLN02575 278 FIYAAQLLNFI-PERCIVFGNSNQTVEAAHDARMKCVAVA-SKHPIYELGAADLVVRR--LDEL 337 (381)
T ss_pred HHHHHHHcCCC-cccEEEEcCCHHHHHHHHHcCCEEEEEC-CCCChhHhcCCCEEECC--HHHH
Confidence 23334444433 4679999999999999999998532 22 322222 2358888744 5554
No 114
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=96.49 E-value=0.014 Score=56.12 Aligned_cols=91 Identities=21% Similarity=0.197 Sum_probs=62.8
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCC--------HHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEE
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDN--------INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVM 730 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~--------~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ 730 (950)
-++.|++.++++.|+++|+++.++|+.. .....++.+.+|+... .....+
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~--------------------- 81 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPID-VLYACP--------------------- 81 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEE-EEEECC---------------------
Confidence 4678999999999999999999999998 7778888898888521 001111
Q ss_pred eecCh--hhHHHHHHHHh-hhCCCEEEEEcC-CccCHHhhhcCCcc
Q 002230 731 ARSSP--MDKHTLVKHLR-TTLGEVVAVTGD-GTNDAPALHEADIG 772 (950)
Q Consensus 731 ar~~P--~~K~~~V~~l~-~~~g~~v~~vGD-G~ND~~al~~AdvG 772 (950)
....| +-=..+.+.++ -. .+.++|+|| ..+|+.+-+.|++-
T Consensus 82 ~~~KP~~~~~~~~~~~~~~~~-~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 82 HCRKPKPGMFLEALKRFNEID-PEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred CCCCCChHHHHHHHHHcCCCC-hhheEEEcCCCcccHHHHHHCCCe
Confidence 01122 21123333331 22 367999999 59999999988763
No 115
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=96.41 E-value=0.0082 Score=63.59 Aligned_cols=87 Identities=20% Similarity=0.258 Sum_probs=62.8
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCC----HHHHHHHHHHcCCc--cCCceeeeCcccccCCHHHHhhhhccccEEeec
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDN----INTAKAIARECGIL--TDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 733 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~----~~ta~~ia~~~gi~--~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (950)
.+.|++.+.++.+++.|+++.++||+. ..++..+.+..|+. .....++.|+..
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--------------------- 172 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP--------------------- 172 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC---------------------
Confidence 367789999999999999999999964 66999999999994 221222222210
Q ss_pred ChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcc
Q 002230 734 SPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 772 (950)
Q Consensus 734 ~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvG 772 (950)
.-.+|.. .+++. | .++++||..+|..+-++|++-
T Consensus 173 ~K~~K~~---~l~~~-~-i~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 173 GQYTKTQ---WLKKK-N-IRIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred CCCCHHH---HHHhc-C-CeEEEcCCHHHHHHHHHcCCc
Confidence 0134544 34433 4 478899999999999999884
No 116
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=96.39 E-value=0.013 Score=61.50 Aligned_cols=94 Identities=17% Similarity=0.195 Sum_probs=66.2
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.||+.+.++.|++.|+++.++|+-+...+....+.+|+..--+.++.+.+. .+..|...
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~------------------~~~KP~~~- 154 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEE------------------GVEKPHPK- 154 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccC------------------CCCCCCHH-
Confidence 47899999999999999999999999988888888999986432233333221 12233222
Q ss_pred HHHHHHhhh--CCCEEEEEcCCc-cCHHhhhcCCcc
Q 002230 740 TLVKHLRTT--LGEVVAVTGDGT-NDAPALHEADIG 772 (950)
Q Consensus 740 ~~V~~l~~~--~g~~v~~vGDG~-ND~~al~~AdvG 772 (950)
.+...+++. ..+.++|+||.. +|+.+-+.|++-
T Consensus 155 ~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~ 190 (221)
T TIGR02253 155 IFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMK 190 (221)
T ss_pred HHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCE
Confidence 222333332 035789999998 999999999884
No 117
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=96.36 E-value=0.021 Score=58.18 Aligned_cols=127 Identities=17% Similarity=0.127 Sum_probs=70.4
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCH---------------HHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhh
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNI---------------NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI 724 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~---------------~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~ 724 (950)
.+.||+.+.+++|++.|+++.++|..+. .....+-+..|+... .++.......
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~--~i~~~~~~~~---------- 96 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD--GIYYCPHHPE---------- 96 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc--eEEECCCCCC----------
Confidence 3579999999999999999999998762 111223344555211 1111000000
Q ss_pred ccccEEeecChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcce-eecCCCcH---HHHhcC--CEEeccCChhH
Q 002230 725 PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL-AMGIAGTE---VAKESA--DVIILDDNFST 798 (950)
Q Consensus 725 ~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGi-amg~~g~~---~ak~~a--Divl~~~~~~~ 798 (950)
...-.....|+--..+.+.+.-. .+.++|+||..+|+.+-+.|++.. .+. .|.. .....+ |+++.+ +..
T Consensus 97 -~~~~~~KP~p~~~~~~~~~l~~~-~~~~~~VgDs~~Di~~A~~aG~~~i~v~-~g~~~~~~~~~~~~~~~ii~~--l~e 171 (181)
T PRK08942 97 -DGCDCRKPKPGMLLSIAERLNID-LAGSPMVGDSLRDLQAAAAAGVTPVLVR-TGKGVTTLAEGAAPGTWVLDS--LAD 171 (181)
T ss_pred -CCCcCCCCCHHHHHHHHHHcCCC-hhhEEEEeCCHHHHHHHHHCCCeEEEEc-CCCCchhhhcccCCCceeecC--HHH
Confidence 00001112233233444444433 367999999999999999999742 222 2221 122335 777743 777
Q ss_pred HHHHH
Q 002230 799 IVTVA 803 (950)
Q Consensus 799 i~~~i 803 (950)
+.+++
T Consensus 172 l~~~l 176 (181)
T PRK08942 172 LPQAL 176 (181)
T ss_pred HHHHH
Confidence 66654
No 118
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=96.36 E-value=0.012 Score=60.77 Aligned_cols=95 Identities=11% Similarity=0.176 Sum_probs=66.9
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhH-
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK- 738 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K- 738 (950)
++.|++.+++++|++.|+++.++|+-+...+..+.+.+|+...-+.++..++. ....|...
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~------------------~~~KP~~~~ 153 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAV------------------RAYKPAPQV 153 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhc------------------CCCCCCHHH
Confidence 46899999999999999999999999999999999999985422223332221 12233321
Q ss_pred -HHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcce
Q 002230 739 -HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 773 (950)
Q Consensus 739 -~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGi 773 (950)
..+.+.+.-. .+.++++||+.+|+.+-+.|++-.
T Consensus 154 ~~~~~~~~~~~-p~~~~~vgD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 154 YQLALEALGVP-PDEVLFVASNPWDLGGAKKFGFKT 188 (198)
T ss_pred HHHHHHHhCCC-hhhEEEEeCCHHHHHHHHHCCCcE
Confidence 2233333322 357889999999999999988753
No 119
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=96.29 E-value=0.015 Score=62.37 Aligned_cols=67 Identities=18% Similarity=0.190 Sum_probs=49.6
Q ss_pred ecChhhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcC--------CcceeecCCCcHHHHhcCCEEeccCChhHHH
Q 002230 732 RSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEA--------DIGLAMGIAGTEVAKESADVIILDDNFSTIV 800 (950)
Q Consensus 732 r~~P~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~A--------dvGiamg~~g~~~ak~~aDivl~~~~~~~i~ 800 (950)
+..+.+|...++.+.+.++ ..++++||+.||.+|++.+ ..|++|+ .|. .+..|++++.+ ...+.
T Consensus 162 ~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g~--~~~~A~~~~~~--~~~v~ 236 (244)
T TIGR00685 162 KPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SGS--KKTVAKFHLTG--PQQVL 236 (244)
T ss_pred eeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cCC--cCCCceEeCCC--HHHHH
Confidence 4455788888888766544 4689999999999999999 5788885 332 35668998864 66666
Q ss_pred HHH
Q 002230 801 TVA 803 (950)
Q Consensus 801 ~~i 803 (950)
+.+
T Consensus 237 ~~L 239 (244)
T TIGR00685 237 EFL 239 (244)
T ss_pred HHH
Confidence 555
No 120
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=96.19 E-value=0.0084 Score=61.07 Aligned_cols=91 Identities=13% Similarity=0.222 Sum_probs=61.2
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.||+.++++.|+++|+++.++|+... +..+.+.+|+...-+.++++.+. .+..|. ..
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~~~~~~~~------------------~~~kp~-p~ 145 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDAIVDPAEI------------------KKGKPD-PE 145 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcEEEehhhc------------------CCCCCC-hH
Confidence 5789999999999999999999997532 45677888886432333333221 122332 22
Q ss_pred HHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcc
Q 002230 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG 772 (950)
Q Consensus 740 ~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvG 772 (950)
.+-+.+++. | +.+.||||..+|+.+-+.|++-
T Consensus 146 ~~~~~~~~~-~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 146 IFLAAAEGL-GVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred HHHHHHHHc-CCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 222233322 3 4688999999999999999884
No 121
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=96.14 E-value=0.017 Score=61.14 Aligned_cols=95 Identities=11% Similarity=0.082 Sum_probs=66.0
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhh--
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD-- 737 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~-- 737 (950)
++.||+.+.++.|++.|+++.++|+-+...+...-+..|+..--+.++.+.+. .+..|..
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~------------------~~~KP~p~~ 154 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTF------------------GYPKEDQRL 154 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeC------------------CCCCCCHHH
Confidence 57899999999999999999999999888888888888886422223322221 1223321
Q ss_pred HHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcce
Q 002230 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 773 (950)
Q Consensus 738 K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGi 773 (950)
=..+.+.+.-. .+.++|+||..+|+.+-+.|++..
T Consensus 155 ~~~~~~~~~~~-p~~~l~igDs~~di~aA~~aG~~~ 189 (224)
T PRK14988 155 WQAVAEHTGLK-AERTLFIDDSEPILDAAAQFGIRY 189 (224)
T ss_pred HHHHHHHcCCC-hHHEEEEcCCHHHHHHHHHcCCeE
Confidence 11222222222 356899999999999999999963
No 122
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=96.14 E-value=0.019 Score=58.17 Aligned_cols=94 Identities=17% Similarity=0.187 Sum_probs=63.1
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.|++.+.++.|++.|+++.++|+-.... ..+..++|+...-..++.+.+.. .....|+-=.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~----------------~~KP~~~~~~ 147 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVG----------------RGKPDPDIYL 147 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCC----------------CCCCCHHHHH
Confidence 578999999999999999999999988877 66656688854322333332211 0111222223
Q ss_pred HHHHHHhhhCCCEEEEEcCCccCHHhhhcCCc
Q 002230 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 771 (950)
Q Consensus 740 ~~V~~l~~~~g~~v~~vGDG~ND~~al~~Adv 771 (950)
.+.+.+... .+.+.++||...|+.+-+++++
T Consensus 148 ~~~~~~~~~-~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 148 LALKKLGLK-PEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred HHHHHcCCC-cceEEEEcCCHHHHHHHHHcCC
Confidence 333333333 4678999999999999998887
No 123
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=96.13 E-value=0.012 Score=65.32 Aligned_cols=109 Identities=13% Similarity=0.005 Sum_probs=75.5
Q ss_pred ccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChh
Q 002230 657 IKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 736 (950)
Q Consensus 657 i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~ 736 (950)
..+++.|++.+.++.|++.|+++.++||.....+..+.+.+|+....-..+.|.+. ....+... --.+..|+
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~-------~~~~~~~~-~~~kp~p~ 255 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPP-------DMHFQREQ-GDKRPDDV 255 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcc-------hhhhcccC-CCCCCcHH
Confidence 57899999999999999999999999999999999999999886310011111110 00000000 01244566
Q ss_pred hHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcce
Q 002230 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 773 (950)
Q Consensus 737 ~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGi 773 (950)
-+...++.+....-+.++|+||..+|+.+-+.|++..
T Consensus 256 ~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 256 VKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred HHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 6777766654321378999999999999999999864
No 124
>PLN02580 trehalose-phosphatase
Probab=96.07 E-value=0.069 Score=60.34 Aligned_cols=63 Identities=21% Similarity=0.259 Sum_probs=47.3
Q ss_pred hhHHHHHHHHhhhCC-----C-EEEEEcCCccCHHhhhc-----CCcceeecCCCcHHHHhcCCEEeccCChhHHHHHH
Q 002230 736 MDKHTLVKHLRTTLG-----E-VVAVTGDGTNDAPALHE-----ADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVA 803 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g-----~-~v~~vGDG~ND~~al~~-----AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i 803 (950)
.+|...|+.+.+.+| . .++++||+.||.+|++. +++||+|| +|... -.|++.+.+ -..+...+
T Consensus 300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vg-n~~~~--t~A~y~L~d--p~eV~~~L 373 (384)
T PLN02580 300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVS-SVPKE--SNAFYSLRD--PSEVMEFL 373 (384)
T ss_pred CCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEe-cCCCC--ccceEEcCC--HHHHHHHH
Confidence 499999998877655 1 25899999999999996 68999999 55442 357888755 56666554
No 125
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=96.06 E-value=0.021 Score=60.04 Aligned_cols=120 Identities=14% Similarity=0.122 Sum_probs=76.7
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhH-
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK- 738 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K- 738 (950)
++.|++.+.++.|++. +++.++|+-....+..+.+++|+..--+.++.+.+. ....|...
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~------------------~~~KP~~~~ 157 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDA------------------GIQKPDKEI 157 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCcc------------------CCCCCCHHH
Confidence 5689999999999999 999999999999999999999986432223322211 11233222
Q ss_pred -HHHHHHH-hhhCCCEEEEEcCCc-cCHHhhhcCCcce-eecC-CCcHHHHhcCCEEeccCChhHHHH
Q 002230 739 -HTLVKHL-RTTLGEVVAVTGDGT-NDAPALHEADIGL-AMGI-AGTEVAKESADVIILDDNFSTIVT 801 (950)
Q Consensus 739 -~~~V~~l-~~~~g~~v~~vGDG~-ND~~al~~AdvGi-amg~-~g~~~ak~~aDivl~~~~~~~i~~ 801 (950)
...++.+ .-. .+.+++|||+. +|+.+-+.+++-. ...- ...+.....+|.++.+ +..+..
T Consensus 158 ~~~~~~~~~~~~-~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~~--~~el~~ 222 (224)
T TIGR02254 158 FNYALERMPKFS-KEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIRS--LEELYE 222 (224)
T ss_pred HHHHHHHhcCCC-chheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEECC--HHHHHh
Confidence 3333444 222 35689999998 8999999999732 2220 1121223356777643 665554
No 126
>PRK09449 dUMP phosphatase; Provisional
Probab=95.87 E-value=0.036 Score=58.47 Aligned_cols=122 Identities=14% Similarity=0.120 Sum_probs=76.4
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.||+.+.++.|+ .|+++.++|......+...-+..|+...-+.++.+.+. ....|. ..
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~------------------~~~KP~-p~ 154 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQV------------------GVAKPD-VA 154 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECcc------------------CCCCCC-HH
Confidence 36899999999999 68999999999888888888888885422222222211 012332 12
Q ss_pred HHHHHHhhh---CCCEEEEEcCCc-cCHHhhhcCCcc-eeecCCCcH-HHHhcCCEEeccCChhHHHHHH
Q 002230 740 TLVKHLRTT---LGEVVAVTGDGT-NDAPALHEADIG-LAMGIAGTE-VAKESADVIILDDNFSTIVTVA 803 (950)
Q Consensus 740 ~~V~~l~~~---~g~~v~~vGDG~-ND~~al~~AdvG-iamg~~g~~-~ak~~aDivl~~~~~~~i~~~i 803 (950)
-+.+.+++. ..+.+++|||.. +|+.+-+.|++- |.....+.+ .....+|+++.+ +..+..++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~--~~el~~~l 222 (224)
T PRK09449 155 IFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSS--LSELEQLL 222 (224)
T ss_pred HHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECC--HHHHHHHH
Confidence 222233322 124799999998 799999999985 333211211 112247888744 77776544
No 127
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=95.84 E-value=0.025 Score=55.66 Aligned_cols=105 Identities=19% Similarity=0.155 Sum_probs=71.7
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcC----CccCCceeeeCcccccCCHHHHhhhhccccEEeecCh
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECG----ILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~g----i~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P 735 (950)
.++|+.++.++.+++.+++++++|+-...-...+-...+ |.. .+++-+...+.. --+.-.+....+|
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~-idi~sn~~~ih~--------dg~h~i~~~~ds~ 143 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYC-IDIVSNNDYIHI--------DGQHSIKYTDDSQ 143 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceee-eEEeecCceEcC--------CCceeeecCCccc
Confidence 478999999999999999999999888777777777665 221 001000000000 0000001111222
Q ss_pred --hhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCccee
Q 002230 736 --MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 774 (950)
Q Consensus 736 --~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGia 774 (950)
.+|...|+.+++. .+.+.++|||+.|.+|-+..|+=+|
T Consensus 144 fG~dK~~vI~~l~e~-~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 144 FGHDKSSVIHELSEP-NESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred cCCCcchhHHHhhcC-CceEEEecCCcccccHhhhhhhHhh
Confidence 6899999999988 8889999999999999998888774
No 128
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=95.82 E-value=0.016 Score=58.90 Aligned_cols=93 Identities=16% Similarity=0.203 Sum_probs=62.3
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhH
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (950)
-++.||+.+.++.|++.|+++.++|+. ..+..+.+.+|+..--..++.+.+. .+..|...
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~------------------~~~kp~~~ 146 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEV------------------KEGKPHPE 146 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhC------------------CCCCCChH
Confidence 368999999999999999999999987 5677888888885322222222111 12233221
Q ss_pred --HHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcc
Q 002230 739 --HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 772 (950)
Q Consensus 739 --~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvG 772 (950)
..+.+.+.-. .+.++++||+.+|+.+-+.|++.
T Consensus 147 ~~~~~~~~~~~~-~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 147 TFLLAAELLGVS-PNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred HHHHHHHHcCCC-HHHeEEEeCcHhhHHHHHHCCCe
Confidence 1222222222 25688999999999999999875
No 129
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=95.76 E-value=0.053 Score=54.67 Aligned_cols=113 Identities=11% Similarity=0.070 Sum_probs=72.7
Q ss_pred eEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCC-CHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccc
Q 002230 649 YTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGD-NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKI 727 (950)
Q Consensus 649 l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD-~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~ 727 (950)
.......+-+-++.||+.+.++.|+++|+++.++|+- ....+..+...+|+..... . ..+...+..+
T Consensus 34 ~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~------~------~~~~~~Fd~i 101 (174)
T TIGR01685 34 SIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGK------T------VPMHSLFDDR 101 (174)
T ss_pred CeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCC------c------ccHHHhceee
Confidence 3345555566688999999999999999999999976 8899999999999852110 0 0000001010
Q ss_pred cEEeecChhhH--HHHHHHHhhhC-----CCEEEEEcCCccCHHhhhcCCccee
Q 002230 728 QVMARSSPMDK--HTLVKHLRTTL-----GEVVAVTGDGTNDAPALHEADIGLA 774 (950)
Q Consensus 728 ~v~ar~~P~~K--~~~V~~l~~~~-----g~~v~~vGDG~ND~~al~~AdvGia 774 (950)
+.+...+..| ..+.+.+.+.. -+.++|+||...|+.+-++|++-..
T Consensus 102 -v~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i 154 (174)
T TIGR01685 102 -IEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSC 154 (174)
T ss_pred -eeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEE
Confidence 2222111122 23344444321 2579999999999999999988654
No 130
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=95.70 E-value=0.015 Score=58.10 Aligned_cols=96 Identities=21% Similarity=0.263 Sum_probs=68.4
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChh-
Q 002230 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM- 736 (950)
Q Consensus 658 ~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~- 736 (950)
..++.|++.+.++.|++.|++++++|+..........+.+|+...-+.++...+.. ...|.
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~------------------~~Kp~~ 136 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVG------------------SRKPDP 136 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSS------------------SSTTSH
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhh------------------hhhhHH
Confidence 34578999999999999999999999999999999999999873222333222211 11222
Q ss_pred -hHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcc
Q 002230 737 -DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 772 (950)
Q Consensus 737 -~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvG 772 (950)
-=..+++.+.-. .+.++++||+..|+.+-+.||+-
T Consensus 137 ~~~~~~~~~~~~~-p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 137 DAYRRALEKLGIP-PEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp HHHHHHHHHHTSS-GGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHHcCCC-cceEEEEeCCHHHHHHHHHcCCe
Confidence 112333344333 46799999999999999999874
No 131
>PLN02940 riboflavin kinase
Probab=95.67 E-value=0.035 Score=63.61 Aligned_cols=114 Identities=18% Similarity=0.155 Sum_probs=74.2
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH-HcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecCh--h
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAR-ECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP--M 736 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~-~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P--~ 736 (950)
++.||+.+.++.|++.|+++.++|+.....+....+ ..|+...-+.++.+++. .+..| +
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v------------------~~~KP~p~ 154 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEV------------------EKGKPSPD 154 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhc------------------CCCCCCHH
Confidence 467999999999999999999999999888877665 67875433334333321 12233 2
Q ss_pred hHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcce-eecCCCc--HHHHhcCCEEecc
Q 002230 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL-AMGIAGT--EVAKESADVIILD 793 (950)
Q Consensus 737 ~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGi-amg~~g~--~~ak~~aDivl~~ 793 (950)
-=..+++.+.-. .+.++|+||+.+|+.+-+.|++.. .+. .+. +.....+|.++.+
T Consensus 155 ~~~~a~~~lgv~-p~~~l~VGDs~~Di~aA~~aGi~~I~v~-~g~~~~~~~~~ad~~i~s 212 (382)
T PLN02940 155 IFLEAAKRLNVE-PSNCLVIEDSLPGVMAGKAAGMEVIAVP-SIPKQTHLYSSADEVINS 212 (382)
T ss_pred HHHHHHHHcCCC-hhHEEEEeCCHHHHHHHHHcCCEEEEEC-CCCcchhhccCccEEeCC
Confidence 222333333333 467899999999999999999863 333 222 2233456666533
No 132
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=95.65 E-value=0.041 Score=60.46 Aligned_cols=120 Identities=17% Similarity=0.154 Sum_probs=74.7
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCcc-CC-ceeeeCcccccCCHHHHhhhhccccEEeecChh-
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT-DN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPM- 736 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~-~~-~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~- 736 (950)
++.||+.+.++.|++.|+++.++|+-+......+-+..+... .+ -.++.+.+ +....|.
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~------------------~~~~KP~p 205 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDD------------------VPKKKPDP 205 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccc------------------cCCCCCCH
Confidence 578999999999999999999999998888877766553221 01 01112221 1112222
Q ss_pred -hHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCc--HHHHhcCCEEeccCChhHHH
Q 002230 737 -DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT--EVAKESADVIILDDNFSTIV 800 (950)
Q Consensus 737 -~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~--~~ak~~aDivl~~~~~~~i~ 800 (950)
-=..+.+.+.-. .+.++||||+.+|+.+-+.|++....-..|. ......+|+++.+ +..+.
T Consensus 206 ~~~~~a~~~~~~~-p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~--~~~l~ 269 (286)
T PLN02779 206 DIYNLAAETLGVD-PSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDC--LGDVP 269 (286)
T ss_pred HHHHHHHHHhCcC-hHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECC--hhhcc
Confidence 223333444333 3679999999999999999998654322332 1112358888743 44443
No 133
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=95.39 E-value=0.068 Score=56.43 Aligned_cols=111 Identities=23% Similarity=0.360 Sum_probs=72.8
Q ss_pred CCCccHHHHHHHH--HHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhc-cccEEeecCh-
Q 002230 660 PMRPGVKESVAIC--RSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIP-KIQVMARSSP- 735 (950)
Q Consensus 660 ~lr~~~~~~I~~l--~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~-~~~v~ar~~P- 735 (950)
|+.|+.++.++.+ ++.|+.+.++|--|..--..+-+.-|+...-..+.+.+..-+-+ ....+.| ...-+.+|.|
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~--G~l~v~pyh~h~C~~C~~N 148 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDAD--GRLRVRPYHSHGCSLCPPN 148 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCC--ceEEEeCccCCCCCcCCCc
Confidence 6788999999999 56899999999999999999999999864322334332211000 0000000 0012445555
Q ss_pred hhHHHHHHHHhhh---CC---CEEEEEcCCccC-HHhhh--cCCcc
Q 002230 736 MDKHTLVKHLRTT---LG---EVVAVTGDGTND-APALH--EADIG 772 (950)
Q Consensus 736 ~~K~~~V~~l~~~---~g---~~v~~vGDG~ND-~~al~--~AdvG 772 (950)
.=|..+++.+++. .| +.|.++|||.|| +|+++ .+|+-
T Consensus 149 mCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v 194 (234)
T PF06888_consen 149 MCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVV 194 (234)
T ss_pred cchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEE
Confidence 5799999888764 13 689999999999 44543 44443
No 134
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=95.36 E-value=0.044 Score=53.97 Aligned_cols=91 Identities=18% Similarity=0.217 Sum_probs=57.5
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
+..+|+.+.++.|++.|+++.++|+-....+....+.. +...-..++...+ +.....|+-=.
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~-----------------~~~Kp~~~~~~ 125 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDE-----------------FGAKPEPEIFL 125 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCC-----------------CCCCcCHHHHH
Confidence 34579999999999999999999999999988887775 4321111111111 11111221112
Q ss_pred HHHHHHhhhCCCEEEEEcCCccCHHhhhcCC
Q 002230 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEAD 770 (950)
Q Consensus 740 ~~V~~l~~~~g~~v~~vGDG~ND~~al~~Ad 770 (950)
.+.+.+.-. . .++++||..+|+.+-+.|+
T Consensus 126 ~~~~~~~~~-~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 126 AALESLGLP-P-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHcCCC-C-CEEEEeCCHHHHHHHHHcc
Confidence 222223222 2 6899999999999888764
No 135
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=95.35 E-value=0.12 Score=52.46 Aligned_cols=37 Identities=11% Similarity=0.177 Sum_probs=33.6
Q ss_pred cHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 002230 664 GVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (950)
Q Consensus 664 ~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~ 700 (950)
.+.+.+.+|+++|++|+.+|.-....-...-+.+|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4678899999999999999999999989999999986
No 136
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=95.29 E-value=0.045 Score=55.20 Aligned_cols=86 Identities=20% Similarity=0.238 Sum_probs=61.4
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCC-HHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhh
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDN-INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~-~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~ 737 (950)
..+-|++.++++.|++.|+++.++|+.+ ...+..+.+.+|+.. ......|..
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~---------------------------~~~~~KP~p 94 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPV---------------------------LPHAVKPPG 94 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEE---------------------------EcCCCCCCh
Confidence 3578999999999999999999999988 677788888888742 111123322
Q ss_pred HHHHHHHHhhh--CCCEEEEEcCCc-cCHHhhhcCCcc
Q 002230 738 KHTLVKHLRTT--LGEVVAVTGDGT-NDAPALHEADIG 772 (950)
Q Consensus 738 K~~~V~~l~~~--~g~~v~~vGDG~-ND~~al~~AdvG 772 (950)
. .+...+++. ..+.++|+||.. .|..+-+.|++-
T Consensus 95 ~-~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 95 C-AFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred H-HHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 2 222223322 035699999998 799999999884
No 137
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=95.19 E-value=0.076 Score=53.83 Aligned_cols=125 Identities=19% Similarity=0.163 Sum_probs=65.7
Q ss_pred CCccHHHHHHHHHHCCCEEEEEcCCCHH---------------HHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhc
Q 002230 661 MRPGVKESVAICRSAGITVRMVTGDNIN---------------TAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIP 725 (950)
Q Consensus 661 lr~~~~~~I~~l~~aGi~v~m~TGD~~~---------------ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~ 725 (950)
+.|++.++++.|+++|+++.++|.-+.. ....+..+.|+.-. .++.......-. .++.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~i~~~~~~~~~~-~~~~---- 99 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLD--GIYYCPHHPEGV-EEFR---- 99 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCcc--EEEECCCCCccc-cccc----
Confidence 5789999999999999999999976631 11223333343211 000000000000 0000
Q ss_pred cccEEeecChhhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcce--eecCCCcH---HHHhcCCEEeccCChh
Q 002230 726 KIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL--AMGIAGTE---VAKESADVIILDDNFS 797 (950)
Q Consensus 726 ~~~v~ar~~P~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGi--amg~~g~~---~ak~~aDivl~~~~~~ 797 (950)
.-.....|.. ..+.+.+++. | +.+.|+||..+|+.+-++|++.. ... .|.. .....+|+++.+ +.
T Consensus 100 --~~~~~~KP~p-~~~~~a~~~~-~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~-~g~~~~~~~~~~ad~~i~~--~~ 172 (176)
T TIGR00213 100 --QVCDCRKPKP-GMLLQARKEL-HIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVR-TGKPITPEAENIADWVLNS--LA 172 (176)
T ss_pred --CCCCCCCCCH-HHHHHHHHHc-CcChhhEEEEcCCHHHHHHHHHCCCcEEEEEe-cCCcccccccccCCEEecc--HH
Confidence 0001123321 1222333332 3 57889999999999999999853 332 3322 122348988843 55
Q ss_pred HH
Q 002230 798 TI 799 (950)
Q Consensus 798 ~i 799 (950)
.+
T Consensus 173 el 174 (176)
T TIGR00213 173 DL 174 (176)
T ss_pred Hh
Confidence 44
No 138
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=95.12 E-value=0.055 Score=53.08 Aligned_cols=97 Identities=25% Similarity=0.334 Sum_probs=59.8
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCH---------------HHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhh
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNI---------------NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI 724 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~---------------~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~ 724 (950)
++.||+.++++.|++.|+++.++|..+. ..+..+.+.+|+... ...... ....
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~-~~~~---------- 94 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVD-GVLFCP-HHPA---------- 94 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCcee-EEEECC-CCCC----------
Confidence 4689999999999999999999998762 455667778887521 000000 0000
Q ss_pred ccccEEeecChhhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcce
Q 002230 725 PKIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL 773 (950)
Q Consensus 725 ~~~~v~ar~~P~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGi 773 (950)
.......|. ..+.+...+..| +.+.|+||...|+.+-+.+++-.
T Consensus 95 ---~~~~~~KP~--~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~ 141 (147)
T TIGR01656 95 ---DNCSCRKPK--PGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAA 141 (147)
T ss_pred ---CCCCCCCCC--HHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCE
Confidence 000001332 223333222224 56999999999999999888753
No 139
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=95.09 E-value=0.2 Score=49.12 Aligned_cols=110 Identities=17% Similarity=0.267 Sum_probs=77.5
Q ss_pred HHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH
Q 002230 616 IEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAR 695 (950)
Q Consensus 616 ~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~ 695 (950)
.+.+..+|++.+.+- + |-|++..= ....-|++++=+.+++++|+++.++|--+...+...+.
T Consensus 20 ~~~L~~~Gikgvi~D---l-------------DNTLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~ 81 (175)
T COG2179 20 PDILKAHGIKGVILD---L-------------DNTLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAE 81 (175)
T ss_pred HHHHHHcCCcEEEEe---c-------------cCceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhh
Confidence 356778899988654 2 22333321 33567888999999999999999999999999999999
Q ss_pred HcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHHHHHhhh--CCCEEEEEcCCc-cCHHhhhcCCc
Q 002230 696 ECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTT--LGEVVAVTGDGT-NDAPALHEADI 771 (950)
Q Consensus 696 ~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~--~g~~v~~vGDG~-ND~~al~~Adv 771 (950)
.+|+.. ++--..|..+ .+-+++++. .-+.|+|+||.. .|+-+=+.|++
T Consensus 82 ~l~v~f---------------------------i~~A~KP~~~-~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~ 132 (175)
T COG2179 82 KLGVPF---------------------------IYRAKKPFGR-AFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGM 132 (175)
T ss_pred hcCCce---------------------------eecccCccHH-HHHHHHHHcCCChhHEEEEcchhhhhhhcccccCc
Confidence 999974 3333455544 445555554 136899999985 47666555544
No 140
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=94.89 E-value=0.036 Score=54.49 Aligned_cols=93 Identities=17% Similarity=-0.007 Sum_probs=65.8
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhhhccccEEeecChhh
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~-~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~ 737 (950)
-++|||+.+.++.|+ .++++.++|.-+...+..+.+.+|+...- ..++.+++.. +..|.
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~------------------~~KP~- 103 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECV------------------FVKGK- 103 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECcccc------------------ccCCe-
Confidence 357999999999998 57999999999999999999999884321 2233333211 12232
Q ss_pred HHHHHHHHhhh--CCCEEEEEcCCccCHHhhhcCCccee
Q 002230 738 KHTLVKHLRTT--LGEVVAVTGDGTNDAPALHEADIGLA 774 (950)
Q Consensus 738 K~~~V~~l~~~--~g~~v~~vGDG~ND~~al~~AdvGia 774 (950)
+.+.++.. ..+.+.++||..+|..+-++|+|-|.
T Consensus 104 ---~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 104 ---YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred ---EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 44444332 13679999999999999888866653
No 141
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=94.81 E-value=0.079 Score=54.90 Aligned_cols=93 Identities=15% Similarity=0.190 Sum_probs=59.7
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++-||+.++++.|++.|+++.++|+-... .....+.+|+...-+.++...+. ....|.. .
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s~~~------------------~~~KP~~-~ 164 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTSYEV------------------GAEKPDP-K 164 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEeeccc------------------CCCCCCH-H
Confidence 57799999999999999999999986554 46777888875322222222111 1112321 1
Q ss_pred HHHHHHhhh--CCCEEEEEcCCc-cCHHhhhcCCcc
Q 002230 740 TLVKHLRTT--LGEVVAVTGDGT-NDAPALHEADIG 772 (950)
Q Consensus 740 ~~V~~l~~~--~g~~v~~vGDG~-ND~~al~~AdvG 772 (950)
-+.+.+++. ..+.++||||+. +|+.+-++|++-
T Consensus 165 ~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 165 IFQEALERAGISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred HHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCe
Confidence 222233322 036799999997 899998888753
No 142
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=94.79 E-value=0.16 Score=63.76 Aligned_cols=77 Identities=14% Similarity=0.173 Sum_probs=50.5
Q ss_pred HHHHHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeeccCCCCccHHHHHHHH-HHCCCEEEEEcCCCHHHH
Q 002230 612 LNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAIC-RSAGITVRMVTGDNINTA 690 (950)
Q Consensus 612 ~~~~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l-~~aGi~v~m~TGD~~~ta 690 (950)
+++..+.|.....|.+++-| |.|++-.....-.+-+++.+++++| ++.|+.|+++||+...+.
T Consensus 584 ~~~i~~~y~~~~~rlI~LDy----------------DGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L 647 (854)
T PLN02205 584 MEHIVSAYKRTTTRAILLDY----------------DGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTL 647 (854)
T ss_pred HHHHHHHHHhhcCeEEEEec----------------CCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHH
Confidence 34455556555556665542 3444422222335667899999997 778999999999999999
Q ss_pred HHHHHH---cCCccCCc
Q 002230 691 KAIARE---CGILTDNG 704 (950)
Q Consensus 691 ~~ia~~---~gi~~~~~ 704 (950)
...-.. +++..+++
T Consensus 648 ~~~f~~~~~l~laaEHG 664 (854)
T PLN02205 648 ADWFSPCEKLGIAAEHG 664 (854)
T ss_pred HHHhCCCCCeEEEEeCC
Confidence 887754 34554444
No 143
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=94.56 E-value=0.16 Score=54.90 Aligned_cols=87 Identities=13% Similarity=0.180 Sum_probs=60.8
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEEcCCCHH---HHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecC
Q 002230 658 KDPMRPGVKESVAICRSAGITVRMVTGDNIN---TAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSS 734 (950)
Q Consensus 658 ~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~---ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~ 734 (950)
..++-||+.+.++.+++.|+++.++|+.... .+....+..|+..... -.++.|-.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~----------------------d~lllr~~ 173 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADE----------------------EHLLLKKD 173 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCc----------------------ceEEeCCC
Confidence 4557899999999999999999999998743 3445667788853110 01444433
Q ss_pred hhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhh
Q 002230 735 PMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALH 767 (950)
Q Consensus 735 P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~ 767 (950)
...|..-.+.+.+. -.+++++||..+|.....
T Consensus 174 ~~~K~~rr~~I~~~-y~Ivl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 174 KSSKESRRQKVQKD-YEIVLLFGDNLLDFDDFF 205 (266)
T ss_pred CCCcHHHHHHHHhc-CCEEEEECCCHHHhhhhh
Confidence 34566666666555 578999999999986543
No 144
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=94.52 E-value=0.31 Score=52.12 Aligned_cols=94 Identities=16% Similarity=0.185 Sum_probs=60.7
Q ss_pred eeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHH--HHHHHcCCcc-CCceeeeCcccccCCHHHHhhhhccccE
Q 002230 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAK--AIARECGILT-DNGIAIEGPEFREKSDEELSKLIPKIQV 729 (950)
Q Consensus 653 G~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~--~ia~~~gi~~-~~~~vi~g~~~~~~~~~~~~~~~~~~~v 729 (950)
|.+.-.+.+-|++.++++.|+++|+++.++|.-....+. ...+++|+.. ....+++..+
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~------------------ 78 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGE------------------ 78 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHH------------------
Confidence 444556778999999999999999999999996654444 5668889864 2222222211
Q ss_pred EeecChhhHHHHHHHHhhh--CCCEEEEEcCCccCHHhhhcCC
Q 002230 730 MARSSPMDKHTLVKHLRTT--LGEVVAVTGDGTNDAPALHEAD 770 (950)
Q Consensus 730 ~ar~~P~~K~~~V~~l~~~--~g~~v~~vGDG~ND~~al~~Ad 770 (950)
.....+.+.+++. .+..+.++||+.+|...+...+
T Consensus 79 ------~~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 79 ------IAVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred ------HHHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 0111222222221 1467999999999998886443
No 145
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=94.44 E-value=0.16 Score=53.37 Aligned_cols=87 Identities=17% Similarity=0.136 Sum_probs=57.9
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEEcCCCHHH---HHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecC
Q 002230 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINT---AKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSS 734 (950)
Q Consensus 658 ~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~t---a~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~ 734 (950)
+-|.-|++.+.++.+++.|++|+++||+.... +..--++.|+..-..+++-+..-. +.+
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~~~LiLR~~~d~------------------~~~ 179 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGWKHLILRGLEDS------------------NKT 179 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCcCeeeecCCCCC------------------Cch
Confidence 44788999999999999999999999999765 334445577753222333221100 001
Q ss_pred -hhhHHHHHHHHhhhCC-CEEEEEcCCccCH
Q 002230 735 -PMDKHTLVKHLRTTLG-EVVAVTGDGTNDA 763 (950)
Q Consensus 735 -P~~K~~~V~~l~~~~g-~~v~~vGDG~ND~ 763 (950)
-.-|...-+.+.+. | .+++.+||-.+|.
T Consensus 180 ~~~yKs~~R~~l~~~-GYrIv~~iGDq~sDl 209 (229)
T TIGR01675 180 VVTYKSEVRKSLMEE-GYRIWGNIGDQWSDL 209 (229)
T ss_pred HhHHHHHHHHHHHhC-CceEEEEECCChHHh
Confidence 11266666666666 6 5889999999996
No 146
>PLN02811 hydrolase
Probab=94.23 E-value=0.13 Score=54.20 Aligned_cols=97 Identities=16% Similarity=0.225 Sum_probs=59.2
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHH-HHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChh--
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKA-IARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM-- 736 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~-ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~-- 736 (950)
++.||+.+.++.|++.|+++.++||-....... ..+..|+...-..++.+.+.. + .+..|.
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~---------------~-~~~KP~p~ 141 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPE---------------V-KQGKPAPD 141 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhh---------------c-cCCCCCcH
Confidence 468999999999999999999999987654332 222234432111222222000 1 111222
Q ss_pred hHHHHHHHHh---hhCCCEEEEEcCCccCHHhhhcCCcce
Q 002230 737 DKHTLVKHLR---TTLGEVVAVTGDGTNDAPALHEADIGL 773 (950)
Q Consensus 737 ~K~~~V~~l~---~~~g~~v~~vGDG~ND~~al~~AdvGi 773 (950)
-=...++.+. -. .+.++||||+..|+.+-+.|++-.
T Consensus 142 ~~~~a~~~~~~~~~~-~~~~v~IgDs~~di~aA~~aG~~~ 180 (220)
T PLN02811 142 IFLAAARRFEDGPVD-PGKVLVFEDAPSGVEAAKNAGMSV 180 (220)
T ss_pred HHHHHHHHhCCCCCC-ccceEEEeccHhhHHHHHHCCCeE
Confidence 2233334442 12 367999999999999999999853
No 147
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=93.92 E-value=0.14 Score=57.46 Aligned_cols=98 Identities=24% Similarity=0.227 Sum_probs=60.9
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCC---------------CHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhh
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGD---------------NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKL 723 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD---------------~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~ 723 (950)
=++.|++.+.++.|+++|+++.++|.- ....+..+.+..|+.. ....+... .. .+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~f-d~i~i~~~-~~--sd------ 98 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKF-DEVLICPH-FP--ED------ 98 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCce-eeEEEeCC-cC--cc------
Confidence 367899999999999999999999983 2334666777777742 11111110 00 00
Q ss_pred hccccEEeecChhhHHHHHHHHhhhC---CCEEEEEcCCccCHHhhhcCCcce
Q 002230 724 IPKIQVMARSSPMDKHTLVKHLRTTL---GEVVAVTGDGTNDAPALHEADIGL 773 (950)
Q Consensus 724 ~~~~~v~ar~~P~~K~~~V~~l~~~~---g~~v~~vGDG~ND~~al~~AdvGi 773 (950)
. ..+| .|. ..++..+.++. .+.+.||||+.+|..+-+.|++-.
T Consensus 99 --~--~~~r-KP~--p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~ 144 (354)
T PRK05446 99 --N--CSCR-KPK--TGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKG 144 (354)
T ss_pred --c--CCCC-CCC--HHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeE
Confidence 0 1111 232 22333332221 267999999999999999999864
No 148
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=93.58 E-value=0.13 Score=51.37 Aligned_cols=98 Identities=21% Similarity=0.181 Sum_probs=60.6
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCC---------------CHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhh
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGD---------------NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI 724 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD---------------~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~ 724 (950)
++-|++.+++++|++.|+++.++|.- ....+..+.+.+|+.- ..++-+.....
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~f--d~ii~~~~~~~---------- 96 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIF--DDVLICPHFPD---------- 96 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCce--eEEEECCCCCC----------
Confidence 45689999999999999999999974 2445677778888741 11111100000
Q ss_pred ccccEEeecChhhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCccee
Q 002230 725 PKIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLA 774 (950)
Q Consensus 725 ~~~~v~ar~~P~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGia 774 (950)
-.... ..|. ..++..+.+++| +.+.|+||+.+|+.+-+.|++-..
T Consensus 97 --~~~~~-~KP~--~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 97 --DNCDC-RKPK--IKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred --CCCCC-CCCC--HHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 00001 1232 233333322223 468999999999999999988643
No 149
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=93.51 E-value=0.23 Score=49.88 Aligned_cols=92 Identities=13% Similarity=0.157 Sum_probs=57.7
Q ss_pred CCccHHHHHHHHHHCCCEEEEEcCCCH------------HHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhcccc
Q 002230 661 MRPGVKESVAICRSAGITVRMVTGDNI------------NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQ 728 (950)
Q Consensus 661 lr~~~~~~I~~l~~aGi~v~m~TGD~~------------~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~ 728 (950)
+-||+.++++.|+++|+++.++|.-+. ..+..+.+.+|+.. ..++.+..
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~--~~ii~~~~----------------- 103 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI--QVLAATHA----------------- 103 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE--EEEEecCC-----------------
Confidence 448999999999999999999997543 24567778888743 22222211
Q ss_pred EEeecChhhH--HHHHHHHh--hhCCCEEEEEcCCc--------cCHHhhhcCCcce
Q 002230 729 VMARSSPMDK--HTLVKHLR--TTLGEVVAVTGDGT--------NDAPALHEADIGL 773 (950)
Q Consensus 729 v~ar~~P~~K--~~~V~~l~--~~~g~~v~~vGDG~--------ND~~al~~AdvGi 773 (950)
...+ .|... ..+.+.+. -. .+.+.||||.. +|..+-++|++-.
T Consensus 104 ~~~~-KP~p~~~~~~~~~~~~~~~-~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 104 GLYR-KPMTGMWEYLQSQYNSPIK-MTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred CCCC-CCccHHHHHHHHHcCCCCC-chhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 0011 22211 22222222 11 25699999996 6999988887654
No 150
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=93.43 E-value=0.33 Score=62.92 Aligned_cols=114 Identities=17% Similarity=0.197 Sum_probs=77.6
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCc-cCCceeeeCcccccCCHHHHhhhhccccEEeecChhh-
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL-TDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD- 737 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~-~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~- 737 (950)
.+.||+.+.++.|+++|+++.++|+-....+..+.+..|+. ..-+.++.+++. .+..|..
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~------------------~~~KP~Pe 222 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAF------------------ENLKPAPD 222 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECccc------------------ccCCCCHH
Confidence 35799999999999999999999999999999999999985 212233333321 1223322
Q ss_pred -HHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcc-eeecCCC---cHHHHhcCCEEecc
Q 002230 738 -KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMGIAG---TEVAKESADVIILD 793 (950)
Q Consensus 738 -K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvG-iamg~~g---~~~ak~~aDivl~~ 793 (950)
=....+.+.-. .+.++++||..+|+.+-+.|++- |.+. .+ .+.....+|+++.+
T Consensus 223 ~~~~a~~~lgv~-p~e~v~IgDs~~Di~AA~~aGm~~I~v~-~~~~~~~L~~~~a~~vi~~ 281 (1057)
T PLN02919 223 IFLAAAKILGVP-TSECVVIEDALAGVQAARAAGMRCIAVT-TTLSEEILKDAGPSLIRKD 281 (1057)
T ss_pred HHHHHHHHcCcC-cccEEEEcCCHHHHHHHHHcCCEEEEEC-CCCCHHHHhhCCCCEEECC
Confidence 22333344333 36789999999999999999983 3332 22 23345678888855
No 151
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=93.29 E-value=0.13 Score=46.94 Aligned_cols=49 Identities=22% Similarity=0.339 Sum_probs=36.2
Q ss_pred eeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH---HHcCCcc
Q 002230 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIA---RECGILT 701 (950)
Q Consensus 653 G~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia---~~~gi~~ 701 (950)
|++...+.+=|++.++|+.|+++|++++++|-....+...++ +.+|+..
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~ 58 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPV 58 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT-
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCC
Confidence 555567888899999999999999999999988755544444 6678764
No 152
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=93.12 E-value=0.88 Score=49.17 Aligned_cols=48 Identities=29% Similarity=0.400 Sum_probs=37.0
Q ss_pred eeeeccCC----CCccHHHHHHHHHHCCCEEEEEcCCCHHH---HHHHHHHcCCc
Q 002230 653 GIVGIKDP----MRPGVKESVAICRSAGITVRMVTGDNINT---AKAIARECGIL 700 (950)
Q Consensus 653 G~~~i~D~----lr~~~~~~I~~l~~aGi~v~m~TGD~~~t---a~~ia~~~gi~ 700 (950)
|.+.-.+. +-|++.++|++|+++|++++++||....+ .....+++|+.
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 44444455 78899999999999999999999977665 44555667875
No 153
>PLN02423 phosphomannomutase
Probab=93.00 E-value=0.37 Score=51.63 Aligned_cols=39 Identities=26% Similarity=0.357 Sum_probs=32.2
Q ss_pred hhHHHHHHHHhhhCCCEEEEEcC----CccCHHhhhc-CCcceeec
Q 002230 736 MDKHTLVKHLRTTLGEVVAVTGD----GTNDAPALHE-ADIGLAMG 776 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g~~v~~vGD----G~ND~~al~~-AdvGiamg 776 (950)
.+|...++.|+ . .+.|+++|| |.||.+||+. -=.|+++.
T Consensus 188 vnKg~al~~L~-~-~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~ 231 (245)
T PLN02423 188 WDKTYCLQFLE-D-FDEIHFFGDKTYEGGNDHEIFESERTIGHTVT 231 (245)
T ss_pred CCHHHHHHHhc-C-cCeEEEEeccCCCCCCcHHHHhCCCcceEEeC
Confidence 68999999998 4 577888899 8999999997 55577764
No 154
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=92.96 E-value=0.32 Score=51.13 Aligned_cols=98 Identities=11% Similarity=0.149 Sum_probs=63.4
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcC---CccCCceeeeCcccccCCHHHHhhhhccccEEeecC
Q 002230 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECG---ILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSS 734 (950)
Q Consensus 658 ~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~g---i~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~ 734 (950)
+-++.||+.+++++|+++|+++.++|..+......+.+..+ +..- +...+. ..+.....
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~-----------------f~~~fd-~~~g~KP~ 154 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY-----------------FSGYFD-TTVGLKTE 154 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh-----------------cceEEE-eCcccCCC
Confidence 45789999999999999999999999998877777666552 2110 000111 00111112
Q ss_pred hhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCccee
Q 002230 735 PMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 774 (950)
Q Consensus 735 P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGia 774 (950)
|+-=..+.+.+.-. .+.++++||...|+.+-++|++-..
T Consensus 155 p~~y~~i~~~lgv~-p~e~lfVgDs~~Di~AA~~AG~~ti 193 (220)
T TIGR01691 155 AQSYVKIAGQLGSP-PREILFLSDIINELDAARKAGLHTG 193 (220)
T ss_pred HHHHHHHHHHhCcC-hhHEEEEeCCHHHHHHHHHcCCEEE
Confidence 22223333333322 3679999999999999999998643
No 155
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=92.96 E-value=0.25 Score=55.20 Aligned_cols=91 Identities=10% Similarity=0.116 Sum_probs=68.7
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH----cCCccCCceeeeCcccccCCHHHHhhhhccccEEeecCh
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE----CGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~----~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P 735 (950)
++.++++++++.|++.|+++.++|.-+...+..+-+. +|+...- ......+
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f-------------------------~~~~~~~ 85 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF-------------------------DARSINW 85 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe-------------------------eEEEEec
Confidence 4578999999999999999999999999999999888 7765310 1112224
Q ss_pred hhHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcceee
Q 002230 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAM 775 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvGiam 775 (950)
..|...++.+.+..| ..++|+||...|..+.+++...+.+
T Consensus 86 ~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~ 128 (320)
T TIGR01686 86 GPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTL 128 (320)
T ss_pred CchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCcc
Confidence 456555555444333 6799999999999999998887644
No 156
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=92.71 E-value=0.25 Score=47.16 Aligned_cols=39 Identities=5% Similarity=0.135 Sum_probs=35.1
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCC-CHHHHHHHHHHcC
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGD-NINTAKAIARECG 698 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD-~~~ta~~ia~~~g 698 (950)
++.||+.+.++.|+++|+++.++|+. ....+..+.+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 78999999999999999999999999 7777777777776
No 157
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=92.58 E-value=0.13 Score=54.15 Aligned_cols=93 Identities=12% Similarity=0.114 Sum_probs=62.0
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhhhccccEEeecCh--h
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSP--M 736 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~-~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P--~ 736 (950)
++.||+.+.++.| ++++.++|+.....+...-+..|+...- ..++++.+. .+..| +
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~------------------~~~KP~p~ 146 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDI------------------QRWKPDPA 146 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhc------------------CCCCCChH
Confidence 4568999999988 5999999999988888888888886421 123332221 11122 2
Q ss_pred hHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCccee
Q 002230 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 774 (950)
Q Consensus 737 ~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGia 774 (950)
-=....+.+.-. .+.++|+||..+|+.+-+.|++...
T Consensus 147 ~~~~a~~~~~~~-p~~~l~igDs~~di~aA~~aG~~~i 183 (221)
T PRK10563 147 LMFHAAEAMNVN-VENCILVDDSSAGAQSGIAAGMEVF 183 (221)
T ss_pred HHHHHHHHcCCC-HHHeEEEeCcHhhHHHHHHCCCEEE
Confidence 222333333222 2568999999999999999998764
No 158
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=92.56 E-value=0.15 Score=53.13 Aligned_cols=95 Identities=14% Similarity=0.149 Sum_probs=56.1
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCCHHH--HHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChh
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDNINT--AKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 736 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~t--a~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~ 736 (950)
-++.|++.+.++.|++.|+++.++|...... ........++...-+.++...+ + ....|.
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~-----------------~-~~~KP~ 154 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCL-----------------E-GLRKPD 154 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeee-----------------c-CCCCCC
Confidence 3578999999999999999999999875433 2222223344221111111110 0 012333
Q ss_pred hH--HHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcc
Q 002230 737 DK--HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 772 (950)
Q Consensus 737 ~K--~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvG 772 (950)
.. ..+.+.+.-. .+.++|+||...|+.+-++|++-
T Consensus 155 p~~~~~~~~~~g~~-~~~~l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 155 PRIYQLMLERLGVA-PEECVFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred HHHHHHHHHHcCCC-HHHeEEEcCCHHHHHHHHHcCCE
Confidence 22 2223333322 35688889999999999999884
No 159
>PLN03017 trehalose-phosphatase
Probab=91.48 E-value=3 Score=47.04 Aligned_cols=46 Identities=22% Similarity=0.163 Sum_probs=36.6
Q ss_pred ceEEEeeeeccC--CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH
Q 002230 648 GYTCIGIVGIKD--PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIA 694 (950)
Q Consensus 648 ~l~~lG~~~i~D--~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia 694 (950)
|.||+-++.-.| .+-++..++|++|. .|+.+.++||+.......+.
T Consensus 119 DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 119 DGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred CCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 556665554333 47789999999999 78999999999999998874
No 160
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=91.27 E-value=0.69 Score=45.51 Aligned_cols=105 Identities=21% Similarity=0.246 Sum_probs=70.6
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH---HHc---CCccCCceeeeCcc--cccCCHHHHhhhhccccE
Q 002230 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIA---REC---GILTDNGIAIEGPE--FREKSDEELSKLIPKIQV 729 (950)
Q Consensus 658 ~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia---~~~---gi~~~~~~vi~g~~--~~~~~~~~~~~~~~~~~v 729 (950)
+|..++++.+.++.+++.|++++.+|+++.-.+...- .+. |..-+.+.++..++ +..+.. .+
T Consensus 25 ~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~Gpv~~sP~~l~~al~r----------Ev 94 (157)
T PF08235_consen 25 KDWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDGPVLLSPDSLFSALHR----------EV 94 (157)
T ss_pred chhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCCCEEECCcchhhhhhc----------cc
Confidence 4799999999999999999999999999965554332 222 11112223322211 111111 14
Q ss_pred EeecChhhHHHHHHHHhhh----CCCEEEEEcCCccCHHhhhcCCcc
Q 002230 730 MARSSPMDKHTLVKHLRTT----LGEVVAVTGDGTNDAPALHEADIG 772 (950)
Q Consensus 730 ~ar~~P~~K~~~V~~l~~~----~g~~v~~vGDG~ND~~al~~AdvG 772 (950)
..+-.-+.|...++.++.. .....+..|...+|+.+-++++|-
T Consensus 95 i~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 95 ISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred cccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 5555557899999998865 235788899999999999988764
No 161
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=90.96 E-value=0.42 Score=49.38 Aligned_cols=95 Identities=13% Similarity=0.130 Sum_probs=57.5
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE-CGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~-~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K 738 (950)
++.|++.++++.|++.|+++.++|.-+.......... .++...-+.++...+ +....|.-.
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~------------------~~~~KP~p~ 145 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQD------------------LGMRKPEAR 145 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecc------------------cCCCCCCHH
Confidence 4689999999999999999999999876654433222 233221111111111 111233211
Q ss_pred --HHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcce
Q 002230 739 --HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 773 (950)
Q Consensus 739 --~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGi 773 (950)
..+++.+.-. .+.+.++||...|+.+-++|++-.
T Consensus 146 ~~~~~~~~~~~~-p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 146 IYQHVLQAEGFS-AADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred HHHHHHHHcCCC-hhHeEEeCCCHHHHHHHHHcCCEE
Confidence 2223333322 356899999999999999998853
No 162
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=90.68 E-value=0.41 Score=48.90 Aligned_cols=121 Identities=21% Similarity=0.270 Sum_probs=72.6
Q ss_pred CCCccHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhc--cccEEeecCh-
Q 002230 660 PMRPGVKESVAICRSAGI-TVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIP--KIQVMARSSP- 735 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi-~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~--~~~v~ar~~P- 735 (950)
|+-|+..++|+.+++.|- .++++|--|..-...+-+..||..--..+.+.+.--.. .-...+.| .-.-+.+|.|
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da--~G~L~v~pyH~~hsC~~CPsN 161 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDA--SGRLLVRPYHTQHSCNLCPSN 161 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCC--CCcEEeecCCCCCccCcCchh
Confidence 678999999999999997 99999999998888888888875310000000000000 00000000 0012334333
Q ss_pred hhHHHHHHHHhhhC---C---CEEEEEcCCccC-HHhhhcCCcceeecCCCcHH
Q 002230 736 MDKHTLVKHLRTTL---G---EVVAVTGDGTND-APALHEADIGLAMGIAGTEV 782 (950)
Q Consensus 736 ~~K~~~V~~l~~~~---g---~~v~~vGDG~ND-~~al~~AdvGiamg~~g~~~ 782 (950)
.=|..++..++... | +.+..+|||.|| +|+++...--+||--.|-+.
T Consensus 162 mCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl 215 (256)
T KOG3120|consen 162 MCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFPL 215 (256)
T ss_pred hhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCch
Confidence 34666666554330 2 378999999999 67877776667776555444
No 163
>PRK10444 UMP phosphatase; Provisional
Probab=90.06 E-value=1.3 Score=47.56 Aligned_cols=48 Identities=19% Similarity=0.296 Sum_probs=40.6
Q ss_pred eeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH---cCCc
Q 002230 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE---CGIL 700 (950)
Q Consensus 653 G~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~---~gi~ 700 (950)
|.+.-.+.+-|++.++++.|++.|++++++|+....+...++++ +|+.
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~ 60 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVD 60 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 55555678889999999999999999999999998888777776 4764
No 164
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=90.02 E-value=0.65 Score=47.21 Aligned_cols=93 Identities=10% Similarity=0.000 Sum_probs=62.3
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEee---cChh
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR---SSPM 736 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar---~~P~ 736 (950)
++.+++.+.+++|+ .++.++|.-+...+..+.+..|+...-+.++.+++. -.+ ..|.
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~-----------------~~~~~~~KP~ 143 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTA-----------------NPDYLLPKPS 143 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecc-----------------cCccCCCCCC
Confidence 36789999999997 479999999999999999999985422223322221 111 2342
Q ss_pred hH--HHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcce
Q 002230 737 DK--HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 773 (950)
Q Consensus 737 ~K--~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGi 773 (950)
.. ..+++.+... .+.++|+||...|+.+-+.|++..
T Consensus 144 p~~~~~~~~~~~~~-~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 144 PQAYEKALREAGVD-PERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred HHHHHHHHHHhCCC-ccceEEEeCCHHHHHHHHHcCCEE
Confidence 22 2333334333 356889999999999999888753
No 165
>PLN02645 phosphoglycolate phosphatase
Probab=89.47 E-value=0.77 Score=51.11 Aligned_cols=49 Identities=22% Similarity=0.369 Sum_probs=38.9
Q ss_pred eeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH---HHcCCcc
Q 002230 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIA---RECGILT 701 (950)
Q Consensus 653 G~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia---~~~gi~~ 701 (950)
|.+.-.+.+=|++.++|+.|++.|++++++|+....+...++ +++|+..
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~ 88 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNV 88 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCC
Confidence 344445666799999999999999999999999977776666 5677753
No 166
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=88.89 E-value=0.6 Score=49.47 Aligned_cols=90 Identities=21% Similarity=0.280 Sum_probs=57.8
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCCHH---HHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecCh
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDNIN---TAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~---ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P 735 (950)
++.=|++.+.++.+++.|++|+++||++.. .+..=-++.|....+.+++.+..-.. .....
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~lr~~~~~~----------------~~~~~ 177 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHLILRPDKDPS----------------KKSAV 177 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGEEEEESSTS----------------S----
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchhccccccccc----------------ccccc
Confidence 355678999999999999999999999754 33333455676542333332221100 00012
Q ss_pred hhHHHHHHHHhhhCC-CEEEEEcCCccCHHh
Q 002230 736 MDKHTLVKHLRTTLG-EVVAVTGDGTNDAPA 765 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g-~~v~~vGDG~ND~~a 765 (950)
.-|...-+.+.+. | ++++.+||..+|..-
T Consensus 178 ~yK~~~r~~i~~~-Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 178 EYKSERRKEIEKK-GYRIIANIGDQLSDFSG 207 (229)
T ss_dssp --SHHHHHHHHHT-TEEEEEEEESSGGGCHC
T ss_pred ccchHHHHHHHHc-CCcEEEEeCCCHHHhhc
Confidence 3477777788777 6 688999999999765
No 167
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=88.81 E-value=0.91 Score=46.16 Aligned_cols=92 Identities=14% Similarity=0.104 Sum_probs=60.4
Q ss_pred CccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHH
Q 002230 662 RPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTL 741 (950)
Q Consensus 662 r~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~ 741 (950)
-|+ .+.++.|++. +++.++||.....+..+-+..|+..--+.++.+++.. ..+..|+-=...
T Consensus 90 ~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~----------------~~KP~p~~~~~~ 151 (188)
T PRK10725 90 LPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQ----------------HHKPAPDTFLRC 151 (188)
T ss_pred ccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhcc----------------CCCCChHHHHHH
Confidence 344 5889999875 8999999999999999999999864322333332211 011122222233
Q ss_pred HHHHhhhCCCEEEEEcCCccCHHhhhcCCcc
Q 002230 742 VKHLRTTLGEVVAVTGDGTNDAPALHEADIG 772 (950)
Q Consensus 742 V~~l~~~~g~~v~~vGDG~ND~~al~~AdvG 772 (950)
.+.++.. .+.+.++||..+|+.+-+.|++-
T Consensus 152 ~~~~~~~-~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 152 AQLMGVQ-PTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred HHHcCCC-HHHeEEEeccHhhHHHHHHCCCE
Confidence 3333322 24578899999999999999875
No 168
>PHA02597 30.2 hypothetical protein; Provisional
Probab=88.41 E-value=1.1 Score=46.10 Aligned_cols=94 Identities=15% Similarity=0.123 Sum_probs=56.3
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++.||+.+.++.|++.+ +.+++|.-+..+....-+.+|+..-. ...+ ...+.+.... .|.
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f-----------------~~~f-~~i~~~~~~~-~kp 133 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALF-----------------PGAF-SEVLMCGHDE-SKE 133 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhC-----------------CCcc-cEEEEeccCc-ccH
Confidence 46899999999999985 56667765544444455566664210 0000 0002222222 133
Q ss_pred HHHHHHhhhCC-CEEEEEcCCccCHHhhhcC--Ccce
Q 002230 740 TLVKHLRTTLG-EVVAVTGDGTNDAPALHEA--DIGL 773 (950)
Q Consensus 740 ~~V~~l~~~~g-~~v~~vGDG~ND~~al~~A--dvGi 773 (950)
.++....+++| +.++++||..+|+.+-++| |+-.
T Consensus 134 ~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~ 170 (197)
T PHA02597 134 KLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPV 170 (197)
T ss_pred HHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcE
Confidence 44444333335 4588999999999999999 9853
No 169
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=87.36 E-value=2.1 Score=42.85 Aligned_cols=84 Identities=19% Similarity=0.158 Sum_probs=62.3
Q ss_pred cCCCCccHHHHHHHHHHCCC--EEEEEcCC-------CHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhcccc
Q 002230 658 KDPMRPGVKESVAICRSAGI--TVRMVTGD-------NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQ 728 (950)
Q Consensus 658 ~D~lr~~~~~~I~~l~~aGi--~v~m~TGD-------~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~ 728 (950)
++.+.|+..+.+++|++.+. +|.++|-- +...|.++.+.+||.--
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpvl-------------------------- 110 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPVL-------------------------- 110 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcEE--------------------------
Confidence 67888999999999999987 49999986 48899999999998520
Q ss_pred EEeecChhhHHHHHHHHhhh----CCCEEEEEcCCc-cCHHhhh
Q 002230 729 VMARSSPMDKHTLVKHLRTT----LGEVVAVTGDGT-NDAPALH 767 (950)
Q Consensus 729 v~ar~~P~~K~~~V~~l~~~----~g~~v~~vGDG~-ND~~al~ 767 (950)
.+....|.-..++.+.++.+ .-+.++|+||-. .|+-+=.
T Consensus 111 ~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN 154 (168)
T PF09419_consen 111 RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGN 154 (168)
T ss_pred EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhh
Confidence 12335786667778877643 135699999974 3544433
No 170
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=87.31 E-value=3.5 Score=41.91 Aligned_cols=51 Identities=22% Similarity=0.354 Sum_probs=42.2
Q ss_pred EEEeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH---HcCCc
Q 002230 650 TCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAR---ECGIL 700 (950)
Q Consensus 650 ~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~---~~gi~ 700 (950)
.+-|.+.++|..-|++.+|++.|+.++.+|..+|.-..+.-+.+.+ .||+.
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~ 66 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFD 66 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCC
Confidence 4569999999999999999999999999999998776665555554 46665
No 171
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=84.87 E-value=1.7 Score=45.83 Aligned_cols=100 Identities=16% Similarity=0.192 Sum_probs=74.2
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhh
Q 002230 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (950)
Q Consensus 658 ~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~ 737 (950)
..++.||+.+.+++|++.|+.+.+.|+-....+..+....|+...-+.++++.+.. -..-.|+-
T Consensus 84 ~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~----------------~~KP~Pd~ 147 (221)
T COG0637 84 GLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVA----------------RGKPAPDI 147 (221)
T ss_pred CCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHh----------------cCCCCCHH
Confidence 34789999999999999999999999999999999999999986433344433321 11233444
Q ss_pred HHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCccee
Q 002230 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 774 (950)
Q Consensus 738 K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGia 774 (950)
=+...+.|.-. ...+.++.|..|.+.|-++|+.-+-
T Consensus 148 yL~Aa~~Lgv~-P~~CvviEDs~~Gi~Aa~aAGm~vv 183 (221)
T COG0637 148 YLLAAERLGVD-PEECVVVEDSPAGIQAAKAAGMRVV 183 (221)
T ss_pred HHHHHHHcCCC-hHHeEEEecchhHHHHHHHCCCEEE
Confidence 44555555434 4678888999999999999998643
No 172
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=84.62 E-value=2.2 Score=46.29 Aligned_cols=52 Identities=15% Similarity=0.177 Sum_probs=44.1
Q ss_pred CC-ccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCccc
Q 002230 661 MR-PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEF 712 (950)
Q Consensus 661 lr-~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~ 712 (950)
+| |++.+++++|+++|+++.++|+-....+...-+++||...-+.++.+.+.
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv 198 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHK 198 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCcc
Confidence 67 99999999999999999999999999999999999997543455555444
No 173
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=83.90 E-value=12 Score=44.49 Aligned_cols=98 Identities=13% Similarity=0.059 Sum_probs=62.2
Q ss_pred CCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCccCCceeeeCcccccCCHHHHhhhhccccEEee------c
Q 002230 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE-CGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR------S 733 (950)
Q Consensus 661 lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~-~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar------~ 733 (950)
+++++.+ .+++.|.+ +++|+-...-++.+|++ +|+.. ++ |.+++.- .+-..-++ |
T Consensus 111 l~~~a~~---~~~~~g~~-vvVSASp~~~Vepfa~~~LGid~----VI-gTeLev~---------~~G~~TG~i~g~~~c 172 (497)
T PLN02177 111 VHPETWR---VFNSFGKR-YIITASPRIMVEPFVKTFLGADK----VL-GTELEVS---------KSGRATGFMKKPGVL 172 (497)
T ss_pred cCHHHHH---HHHhCCCE-EEEECCcHHHHHHHHHHcCCCCE----EE-ecccEEC---------cCCEEeeeecCCCCC
Confidence 5666555 44567754 99999999999999987 89863 11 2111100 00001111 3
Q ss_pred ChhhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecC
Q 002230 734 SPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGI 777 (950)
Q Consensus 734 ~P~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~ 777 (950)
.-++|..-++..... .....+-||..||.|||+.|+-+.+++.
T Consensus 173 ~Ge~Kv~rl~~~~g~-~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 173 VGDHKRDAVLKEFGD-ALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred ccHHHHHHHHHHhCC-CCceEEEECCccHHHHHHhCCccEEeCC
Confidence 446688777643211 1122567999999999999999999983
No 174
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=83.00 E-value=11 Score=41.29 Aligned_cols=48 Identities=17% Similarity=0.205 Sum_probs=35.3
Q ss_pred eeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHH---HHHHHcCCcc
Q 002230 654 IVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAK---AIARECGILT 701 (950)
Q Consensus 654 ~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~---~ia~~~gi~~ 701 (950)
.+.-.+.+-|++.++|++|++.|++++++|+....+.. .-.+++|+..
T Consensus 12 tl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~ 62 (279)
T TIGR01452 12 VLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNG 62 (279)
T ss_pred ceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 33445667788999999999999999999997643332 3345678754
No 175
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=82.72 E-value=2.6 Score=41.58 Aligned_cols=86 Identities=21% Similarity=0.295 Sum_probs=58.3
Q ss_pred CCccHHHHHHHHHHCCCEEEEEcCCCH----HHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecCh-
Q 002230 661 MRPGVKESVAICRSAGITVRMVTGDNI----NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP- 735 (950)
Q Consensus 661 lr~~~~~~I~~l~~aGi~v~m~TGD~~----~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P- 735 (950)
+++-+++.|..-++.|=.++.+||+.. .+++.+|+...|.+.+.. .|+...|
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv-----------------------~f~Gdk~k 171 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPV-----------------------IFAGDKPK 171 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcce-----------------------eeccCCCC
Confidence 344568888888999999999999974 456677787887654333 3333333
Q ss_pred hhHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcCCc
Q 002230 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 771 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~Adv 771 (950)
..+..-...+|++ +-.+ .-||+.||+.|-++|++
T Consensus 172 ~~qy~Kt~~i~~~-~~~I-hYGDSD~Di~AAkeaG~ 205 (237)
T COG3700 172 PGQYTKTQWIQDK-NIRI-HYGDSDNDITAAKEAGA 205 (237)
T ss_pred cccccccHHHHhc-CceE-EecCCchhhhHHHhcCc
Confidence 1122224456655 5444 45999999999999986
No 176
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=82.70 E-value=5.8 Score=42.66 Aligned_cols=88 Identities=20% Similarity=0.289 Sum_probs=54.4
Q ss_pred cCCCCccHHHHHHHHHHCCCEEEEEcCCCHH----HHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeec
Q 002230 658 KDPMRPGVKESVAICRSAGITVRMVTGDNIN----TAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 733 (950)
Q Consensus 658 ~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~----ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (950)
+.|.=|++.+..+.+++.|++|+++||+... |...+ ++.|......+++.+..-.. ...
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL-~kaGy~~~~~LiLR~~~D~~----------------~~~ 205 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANL-KKAGYHTWEKLILKDPQDNS----------------AEN 205 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH-HHcCCCCcceeeecCCCCCc----------------cch
Confidence 5567789999999999999999999999854 33333 34677532223332211000 000
Q ss_pred ChhhHHHHHHHHhhhCC-CEEEEEcCCccCH
Q 002230 734 SPMDKHTLVKHLRTTLG-EVVAVTGDGTNDA 763 (950)
Q Consensus 734 ~P~~K~~~V~~l~~~~g-~~v~~vGDG~ND~ 763 (950)
..+-|...-+.+.+. | ++++.+||-.+|.
T Consensus 206 av~yKs~~R~~li~e-GYrIv~~iGDq~sDl 235 (275)
T TIGR01680 206 AVEYKTAARAKLIQE-GYNIVGIIGDQWNDL 235 (275)
T ss_pred hHHHHHHHHHHHHHc-CceEEEEECCCHHhc
Confidence 112344444444445 5 6889999999996
No 177
>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures. These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A ....
Probab=82.53 E-value=0.098 Score=42.87 Aligned_cols=54 Identities=11% Similarity=0.201 Sum_probs=46.0
Q ss_pred hhccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcc
Q 002230 42 TANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQ 97 (950)
Q Consensus 42 ~~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 97 (950)
+..|.++.++.+.+.+++..+.+++...++.+.|+.. ..+...+.+.++++||.
T Consensus 9 C~~C~~~v~~~l~~~~GV~~v~vd~~~~~v~v~~~~~--~~~~~~i~~~i~~~Gy~ 62 (62)
T PF00403_consen 9 CEGCAKKVEKALSKLPGVKSVKVDLETKTVTVTYDPD--KTSIEKIIEAIEKAGYE 62 (62)
T ss_dssp SHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEESTT--TSCHHHHHHHHHHTTSE
T ss_pred cHHHHHHHHHHHhcCCCCcEEEEECCCCEEEEEEecC--CCCHHHHHHHHHHhCcC
Confidence 5578889999999999999999999999999999766 44557788888888884
No 178
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=80.23 E-value=5 Score=42.69 Aligned_cols=92 Identities=13% Similarity=0.149 Sum_probs=55.3
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhH-
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK- 738 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K- 738 (950)
++-||+.++++.|++. +++.++|.-+.. .+..|+...-+.++...+. .+..|...
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~------------------~~~KP~p~~ 168 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPH------------------GRSKPFSDM 168 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhceeEecccC------------------CcCCCcHHH
Confidence 4568999999999875 899999986653 2556764321122222111 12233211
Q ss_pred -HHHHHHHhhhCCCEEEEEcCC-ccCHHhhhcCCcceeec
Q 002230 739 -HTLVKHLRTTLGEVVAVTGDG-TNDAPALHEADIGLAMG 776 (950)
Q Consensus 739 -~~~V~~l~~~~g~~v~~vGDG-~ND~~al~~AdvGiamg 776 (950)
....+.+.-. .+.++||||. ..|+.+-+.|++-....
T Consensus 169 ~~~a~~~~~~~-~~~~~~VGD~~~~Di~~A~~aG~~~i~v 207 (238)
T PRK10748 169 YHLAAEKLNVP-IGEILHVGDDLTTDVAGAIRCGMQACWI 207 (238)
T ss_pred HHHHHHHcCCC-hhHEEEEcCCcHHHHHHHHHCCCeEEEE
Confidence 1222222222 3579999999 59999999999865443
No 179
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=79.80 E-value=4.4 Score=44.13 Aligned_cols=51 Identities=20% Similarity=0.149 Sum_probs=41.8
Q ss_pred CC-ccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcc
Q 002230 661 MR-PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPE 711 (950)
Q Consensus 661 lr-~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~ 711 (950)
+| |++.+++++|+++|+++.++|+.+...+..+.+..|+...-..++.+..
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~ 199 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGR 199 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCC
Confidence 46 8999999999999999999998888888999999999754344444433
No 180
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=79.70 E-value=3.7 Score=38.99 Aligned_cols=32 Identities=16% Similarity=0.163 Sum_probs=28.8
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCCHHHH
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTA 690 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta 690 (950)
+++.+++.++++++++.|+.++++||++....
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~ 54 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTY 54 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhh
Confidence 67889999999999999999999999987543
No 181
>PLN02151 trehalose-phosphatase
Probab=78.95 E-value=22 Score=40.03 Aligned_cols=63 Identities=17% Similarity=0.257 Sum_probs=43.8
Q ss_pred hhHHHHHHHHhhhCC------CEEEEEcCCccCHHhhhcC-----CcceeecCCCcHHHHhcCCEEeccCChhHHHHHH
Q 002230 736 MDKHTLVKHLRTTLG------EVVAVTGDGTNDAPALHEA-----DIGLAMGIAGTEVAKESADVIILDDNFSTIVTVA 803 (950)
Q Consensus 736 ~~K~~~V~~l~~~~g------~~v~~vGDG~ND~~al~~A-----dvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i 803 (950)
.+|...|+.+.+..+ ..++++||...|-.|++.. ++||-+| .+.. .-.|++.|.+ -..+..++
T Consensus 268 ~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg-~~~k--~T~A~y~L~d--p~eV~~~L 341 (354)
T PLN02151 268 WDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVS-KYAK--ETNASYSLQE--PDEVMEFL 341 (354)
T ss_pred CCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEec-cCCC--CCcceEeCCC--HHHHHHHH
Confidence 489999998876534 2488999999999998753 6777776 2221 2357888865 56665554
No 182
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=77.80 E-value=4.6 Score=43.37 Aligned_cols=49 Identities=14% Similarity=0.083 Sum_probs=39.9
Q ss_pred eeeeccCCCCccHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCcc
Q 002230 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTG---DNINTAKAIARECGILT 701 (950)
Q Consensus 653 G~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TG---D~~~ta~~ia~~~gi~~ 701 (950)
|.+.-.+.+=|++.++|++|++.|++++++|| +.........+++|+..
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~ 61 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPA 61 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 33344566667999999999999999999996 77888888888899864
No 183
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=76.50 E-value=1.9 Score=42.95 Aligned_cols=91 Identities=15% Similarity=0.055 Sum_probs=60.1
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecC-hhhH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSS-PMDK 738 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~-P~~K 738 (950)
..||++.+.++.|.+. +++++.|-.....|..+...++.... .+.. +++|-+ ...|
T Consensus 42 ~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~---~f~~-------------------~l~r~~~~~~~ 98 (162)
T TIGR02251 42 FKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGK---VISR-------------------RLYRESCVFTN 98 (162)
T ss_pred EECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCC---EEeE-------------------EEEccccEEeC
Confidence 5799999999999988 99999999999999999999886431 0100 111100 0001
Q ss_pred HHHHHHHhhh--CCCEEEEEcCCccCHHhhhcCCcce
Q 002230 739 HTLVKHLRTT--LGEVVAVTGDGTNDAPALHEADIGL 773 (950)
Q Consensus 739 ~~~V~~l~~~--~g~~v~~vGDG~ND~~al~~AdvGi 773 (950)
...++.|..- .-..|.++||...|..+-++++|-+
T Consensus 99 ~~~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i 135 (162)
T TIGR02251 99 GKYVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPI 135 (162)
T ss_pred CCEEeEchhcCCChhhEEEEeCChhhhccCccCEeec
Confidence 1133444332 0256899999998887766665544
No 184
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=75.22 E-value=5.9 Score=40.06 Aligned_cols=96 Identities=24% Similarity=0.308 Sum_probs=55.8
Q ss_pred CCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCH---HHHhhh---hccccEEeecC
Q 002230 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSD---EELSKL---IPKIQVMARSS 734 (950)
Q Consensus 661 lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~---~~~~~~---~~~~~v~ar~~ 734 (950)
+.|++.+++..++++|++++|+|- +-||... -.++.+|..+.. +.+.+. ++.+ .+|.-.
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTN-----------QsGi~rg---yf~~~~f~~~~~~m~~~l~~~gv~id~i-~~Cph~ 96 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTN-----------QSGIGRG---YFTEADFDKLHNKMLKILASQGVKIDGI-LYCPHH 96 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEEC-----------CCCcccc---CccHHHHHHHHHHHHHHHHHcCCccceE-EECCCC
Confidence 578999999999999999999984 2233221 111111111110 011100 0111 333333
Q ss_pred hh--------hHHHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCcc
Q 002230 735 PM--------DKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG 772 (950)
Q Consensus 735 P~--------~K~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~AdvG 772 (950)
|+ ....+.+.+++. + ....||||-..|..+-..|+++
T Consensus 97 p~~~c~cRKP~~gm~~~~~~~~-~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 97 PEDNCDCRKPKPGMLLSALKEY-NIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred CCCCCcccCCChHHHHHHHHHh-CCCccceEEecCcHHHHHHHHHCCCC
Confidence 33 234455555554 5 6789999999999998888876
No 185
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=74.98 E-value=66 Score=41.94 Aligned_cols=196 Identities=13% Similarity=0.111 Sum_probs=99.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhh-----hcCCeEEE----EeCCeEEEEecCCcCCCcEEEeCCCCeecccEEEEeecc
Q 002230 211 LLVVFVTATSDYKQSLQFKDLDRE-----KKKITVQV----ARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFS 281 (950)
Q Consensus 211 llv~~v~~~~~~~~~~~~~~l~~~-----~~~~~v~V----~R~g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g~~ 281 (950)
.++.+..-.+......++.++... .+....++ +.-|....+...|.+|.|.+.++..+ +=+|=-.+.|++
T Consensus 118 ~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~-l~VdeS~LTGES 196 (997)
T TIGR01106 118 GCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG-CKVDNSSLTGES 196 (997)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEccC-cEEEccccCCCC
Confidence 344555555666666666665321 12222222 24688999999999999999998653 446666667776
Q ss_pred eEEEcccccCCCCcccccC---CCCeEEeccEEeeceEEEEEEEEeeccchhhHhhhhcCC-CCCCChhHHHHHHHHHHH
Q 002230 282 VLINESSLTGESEPVNVNA---LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEG-GDDETPLQVKLNGVATII 357 (950)
Q Consensus 282 l~VDeS~LTGEs~pv~k~~---~~~~l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~~~~-~~~~tplq~~l~~~a~~i 357 (950)
.-|.-..-..+..|....+ .+..+.+|+-..-=...+.=+..|.-. ++++..... ..-...+++..+.++.+.
T Consensus 197 ~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~---~~~~~~~~~~~pl~~~~~~~~~~~~~~~ 273 (997)
T TIGR01106 197 EPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIA---SLASGLENGKTPIAIEIEHFIHIITGVA 273 (997)
T ss_pred CceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHH---hhhhhcccCCCcHHHHHHHHHHHHHHHH
Confidence 4343322111112222211 123477776433222233344455433 233222222 122245566667766665
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Q 002230 358 GKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAM 428 (950)
Q Consensus 358 ~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~lav~l~l~~~~ 428 (950)
..+++++.++.++.. ..+.. .+...+...+..+-.+.|..++++...+.....
T Consensus 274 ~~~~~~~~~~~~~~~-~~~~~-----------------~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m~ 326 (997)
T TIGR01106 274 VFLGVSFFILSLILG-YTWLE-----------------AVIFLIGIIVANVPEGLLATVTVCLTLTAKRMA 326 (997)
T ss_pred HHHHHHHHHHHHHhc-CCHHH-----------------HHHHHHHHHhhcCCccchHHHHHHHHHHHHHHH
Confidence 555554444433221 11110 112233445555667778888888877765433
No 186
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=73.47 E-value=9.6 Score=45.39 Aligned_cols=40 Identities=18% Similarity=0.292 Sum_probs=33.0
Q ss_pred CCccHHHHHHHHHHCCCEEEEEcCCCH------------HHHHHHHHHcCCc
Q 002230 661 MRPGVKESVAICRSAGITVRMVTGDNI------------NTAKAIARECGIL 700 (950)
Q Consensus 661 lr~~~~~~I~~l~~aGi~v~m~TGD~~------------~ta~~ia~~~gi~ 700 (950)
+-|++.++++.|+++|++++++|.-.. ..+.++.+++|+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 469999999999999999999997544 3467777888874
No 187
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=73.18 E-value=7.4 Score=41.31 Aligned_cols=64 Identities=23% Similarity=0.293 Sum_probs=32.6
Q ss_pred EEeecChhhHHHHHHHHhhhCCC------EEEEEcCCccCHHhhhcC------CcceeecCCCc-HHHHhcCCEEecc
Q 002230 729 VMARSSPMDKHTLVKHLRTTLGE------VVAVTGDGTNDAPALHEA------DIGLAMGIAGT-EVAKESADVIILD 793 (950)
Q Consensus 729 v~ar~~P~~K~~~V~~l~~~~g~------~v~~vGDG~ND~~al~~A------dvGiamg~~g~-~~ak~~aDivl~~ 793 (950)
|-.|..-..|...|+.+-+..+. .++++||...|-.|++.. ++++.+| .+. ..-..+|++-+.+
T Consensus 157 vEvrp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~-~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 157 VEVRPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVG-SVSVGEKPTAASYRLDD 233 (235)
T ss_dssp EEEE-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES------------------
T ss_pred EEEEeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEE-eeccccccccccccccc
Confidence 44455556699999988776453 689999999999998764 5677777 332 1233456665544
No 188
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=72.60 E-value=69 Score=40.38 Aligned_cols=38 Identities=26% Similarity=0.350 Sum_probs=22.9
Q ss_pred eCCeEEEEecCCcCCCcEEEeCCCCeecccEEEEeecce
Q 002230 244 RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSV 282 (950)
Q Consensus 244 R~g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g~~l 282 (950)
.-|....+...|.+|-|.+.++ |+..=+|=-.+.|++.
T Consensus 111 v~GDiV~l~~Gd~IPaDg~vi~-g~~~~VDeS~LTGES~ 148 (755)
T TIGR01647 111 VPGDVVRLKIGDIVPADCRLFE-GDYIQVDQAALTGESL 148 (755)
T ss_pred cCCCEEEECCCCEEeceEEEEe-cCceEEEcccccCCcc
Confidence 3566777777777777777664 3334445555555553
No 189
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=72.28 E-value=3.1 Score=41.67 Aligned_cols=84 Identities=13% Similarity=0.084 Sum_probs=53.3
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhH-
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK- 738 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K- 738 (950)
++.||+.++++ ++.++|.-+........+.+|+...-..++++++ + ....|...
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~-----------------~-~~~KP~p~~ 144 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYFDRAFSVDT-----------------V-RAYKPDPVV 144 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhh-----------------c-CCCCCCHHH
Confidence 47889999988 3779999888888888899998542112222221 1 11233332
Q ss_pred -HHHHHHHhhhCCCEEEEEcCCccCHHhhhcC
Q 002230 739 -HTLVKHLRTTLGEVVAVTGDGTNDAPALHEA 769 (950)
Q Consensus 739 -~~~V~~l~~~~g~~v~~vGDG~ND~~al~~A 769 (950)
..+.+.+.-. .+.++||||...|+.+-+++
T Consensus 145 f~~~~~~~~~~-p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 145 YELVFDTVGLP-PDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHHHHHHHCCC-HHHeEeEecChhhHHHHhcC
Confidence 3334444333 36799999999998876543
No 190
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=72.13 E-value=1.7e+02 Score=38.53 Aligned_cols=42 Identities=24% Similarity=0.187 Sum_probs=29.9
Q ss_pred eCCeEEEEe--cCCcCCCcEEEeCCCCeecccEEEEeecceEEEcc
Q 002230 244 RNGFRRKIS--IYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINES 287 (950)
Q Consensus 244 R~g~~~~I~--~~dLvvGDiV~l~~Gd~vPaDgill~g~~l~VDeS 287 (950)
.-|....+. ..+.+|.|.+.++ |+ .=+|==.+.|++.-|.=.
T Consensus 248 vpGDiv~l~~~~g~~iPaD~~ll~-g~-~~VdES~LTGES~Pv~K~ 291 (1054)
T TIGR01657 248 VPGDIVSIPRPEEKTMPCDSVLLS-GS-CIVNESMLTGESVPVLKF 291 (1054)
T ss_pred CCCCEEEEecCCCCEecceEEEEe-Cc-EEEecccccCCccceecc
Confidence 357788888 8999999999986 43 456666677776444333
No 191
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=68.08 E-value=1.3e+02 Score=38.80 Aligned_cols=173 Identities=16% Similarity=0.143 Sum_probs=81.7
Q ss_pred eCCeEEEEecCCcCCCcEEEeCCCCeecccEEEEeecceEEEccc--ccCC-CCccccc---CCCCeEEeccEEeeceEE
Q 002230 244 RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESS--LTGE-SEPVNVN---ALNPFLLSGTKVQNGSCK 317 (950)
Q Consensus 244 R~g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g~~l~VDeS~--LTGE-s~pv~k~---~~~~~l~sGt~v~~G~~~ 317 (950)
.-|....+...|.+|-|.+.++.. ..=+|=-.+.|++.-|.-.. ..++ ..+..+. -.+..+.+|.-..-=...
T Consensus 92 v~GDiv~l~~Gd~IPaD~~ll~~~-~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~~G~~~~~V~~t 170 (917)
T TIGR01116 92 VPGDIVELAVGDKVPADIRVLSLK-TLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRT 170 (917)
T ss_pred CCCCEEEECCCCEeeccEEEEEec-ceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEecceEEEEEEEe
Confidence 468899999999999999999765 23355556666653332221 1111 1122221 123457777644332233
Q ss_pred EEEEEEeeccchhhHhhhhcC-CCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cccCCCccccCCcchH
Q 002230 318 MLVTTVGMRTQWGKLMATLSE-GGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTR-KLQEGTHWTWSGDDAL 395 (950)
Q Consensus 318 ~~V~~~G~~T~~g~i~~~~~~-~~~~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~ 395 (950)
+.=+..|.=. +.++...+ ...-+..+.+....+..+...+++++.++....+. ..... .+... + ..
T Consensus 171 G~~T~~gki~---~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~--~------~~ 238 (917)
T TIGR01116 171 GMSTEIGKIR---DEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFN-DPALGGGWIQG--A------IY 238 (917)
T ss_pred CCCCHHHHHH---HHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cccccchhHHH--H------HH
Confidence 3334444211 22222222 12222444555555555444444333332221111 00000 00000 0 00
Q ss_pred HHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Q 002230 396 EILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMK 429 (950)
Q Consensus 396 ~~~~~~~~~i~ilvvavP~~L~lav~l~l~~~~~ 429 (950)
.+...+..++..+-.+.|..++++...+.....+
T Consensus 239 ~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~ 272 (917)
T TIGR01116 239 YFKIAVALAVAAIPEGLPAVITTCLALGTRKMAK 272 (917)
T ss_pred HHHHHHhhhhhccccccHHHHHHHHHHHHHHHHH
Confidence 2233455566677788888888888887765543
No 192
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=65.85 E-value=21 Score=37.24 Aligned_cols=122 Identities=16% Similarity=0.154 Sum_probs=71.9
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
++-+++.++++.+++. +++.++|--....+....+++||...-+.++... -.....|..+
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~------------------~~g~~KP~~~- 158 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFDAVFISE------------------DVGVAKPDPE- 158 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhheEEEec------------------ccccCCCCcH-
Confidence 4567889999999988 9999999988888889999999764322222111 1223455433
Q ss_pred HHHHHHhhh--CCCEEEEEcCC-ccCHHhhhcCCcc-eeecCCCcH--HHHhcCCEEeccCChhHHHHHH
Q 002230 740 TLVKHLRTT--LGEVVAVTGDG-TNDAPALHEADIG-LAMGIAGTE--VAKESADVIILDDNFSTIVTVA 803 (950)
Q Consensus 740 ~~V~~l~~~--~g~~v~~vGDG-~ND~~al~~AdvG-iamg~~g~~--~ak~~aDivl~~~~~~~i~~~i 803 (950)
..-..+++. ..+.++||||. .||+..-+++|.- +-+...+.. ......|+.+.+ +..+..++
T Consensus 159 ~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i~~--l~~l~~~~ 226 (229)
T COG1011 159 IFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEISS--LAELLDLL 226 (229)
T ss_pred HHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEEcC--HHHHHHHH
Confidence 222333332 03579999996 5674555666653 333312211 111446666644 66655544
No 193
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=65.57 E-value=31 Score=37.26 Aligned_cols=125 Identities=19% Similarity=0.221 Sum_probs=78.3
Q ss_pred EeeeeccCCCCccHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHcCC--ccCCceee---eCcccccCC---------
Q 002230 652 IGIVGIKDPMRPGVKESVAICRSA-GITVRMVTGDNINTAKAIARECGI--LTDNGIAI---EGPEFREKS--------- 716 (950)
Q Consensus 652 lG~~~i~D~lr~~~~~~I~~l~~a-Gi~v~m~TGD~~~ta~~ia~~~gi--~~~~~~vi---~g~~~~~~~--------- 716 (950)
+..--...++-++..+.++.|... ..-++|+||+..........--|| ..+++..+ +|.......
T Consensus 32 i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehGa~~r~~~g~~~~~~~~~~~~~~~~ 111 (266)
T COG1877 32 IVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLK 111 (266)
T ss_pred cccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEecceEEecCCCCeeEecCHHHHhhHHH
Confidence 344445667778889999999887 457999999999888877763333 33333222 332222111
Q ss_pred ---------------------------------HHHH-----hh---hh---------ccccEEeecChhhHHHHHHHHh
Q 002230 717 ---------------------------------DEEL-----SK---LI---------PKIQVMARSSPMDKHTLVKHLR 746 (950)
Q Consensus 717 ---------------------------------~~~~-----~~---~~---------~~~~v~ar~~P~~K~~~V~~l~ 746 (950)
+++. .+ .. .+..|.+|.+-..|...++.+.
T Consensus 112 ~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~ 191 (266)
T COG1877 112 EVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPPGVSKGAAIKYIM 191 (266)
T ss_pred HHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeCCcchHHHHHHHH
Confidence 1000 00 00 1223556666677999999766
Q ss_pred hhCCC---EEEEEcCCccCHHhhhcCC----cceeec
Q 002230 747 TTLGE---VVAVTGDGTNDAPALHEAD----IGLAMG 776 (950)
Q Consensus 747 ~~~g~---~v~~vGDG~ND~~al~~Ad----vGiamg 776 (950)
+..+. .+...||..-|-.|++..+ ++|-+|
T Consensus 192 ~~~~~~~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v~ 228 (266)
T COG1877 192 DELPFDGRFPIFAGDDLTDEDAFAAVNKLDSITVKVG 228 (266)
T ss_pred hcCCCCCCcceecCCCCccHHHHHhhccCCCceEEec
Confidence 55343 4788899999999999887 455555
No 194
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=65.41 E-value=20 Score=38.20 Aligned_cols=132 Identities=19% Similarity=0.271 Sum_probs=70.1
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCc-ccccCCHHHHhhhhccccEEeecC---
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGP-EFREKSDEELSKLIPKIQVMARSS--- 734 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~-~~~~~~~~~~~~~~~~~~v~ar~~--- 734 (950)
-.+|+++.+.++.|++.+|.+.++|+-=-.....+-++-|...++-.+++.. .|++- -.+.+-..
T Consensus 89 i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~-----------g~l~gF~~~lI 157 (246)
T PF05822_consen 89 IMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMDFDED-----------GVLVGFKGPLI 157 (246)
T ss_dssp --B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EEE-TT-----------SBEEEE-SS--
T ss_pred hhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEEECCc-----------ceEeecCCCce
Confidence 4589999999999999999999999887777777777778877665444321 11100 00111000
Q ss_pred -hhhHHH-------HHHHHhhhCCCEEEEEcCCccCHHhhhcC-Ccc--eeecC-C-CcH----HHHhcCCEEeccCChh
Q 002230 735 -PMDKHT-------LVKHLRTTLGEVVAVTGDGTNDAPALHEA-DIG--LAMGI-A-GTE----VAKESADVIILDDNFS 797 (950)
Q Consensus 735 -P~~K~~-------~V~~l~~~~g~~v~~vGDG~ND~~al~~A-dvG--iamg~-~-g~~----~ak~~aDivl~~~~~~ 797 (950)
+-.|-. .-+.++.+ ..|+..||..-|+.|-.-. +.. +.+|- + ..| .-+++=|||+.+|.=.
T Consensus 158 H~~NKn~~~l~~~~~~~~~~~R--~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D~tm 235 (246)
T PF05822_consen 158 HTFNKNESALEDSPYFKQLKKR--TNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLVDDQTM 235 (246)
T ss_dssp -TT-HHHHHHTTHHHHHCTTT----EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEET--B-
T ss_pred EEeeCCcccccCchHHHHhccC--CcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEECCCCc
Confidence 111211 12233332 5677779999999997655 222 22220 1 122 3567889999998766
Q ss_pred HHHHHH
Q 002230 798 TIVTVA 803 (950)
Q Consensus 798 ~i~~~i 803 (950)
.++..|
T Consensus 236 ~v~~~i 241 (246)
T PF05822_consen 236 DVPNAI 241 (246)
T ss_dssp HHHHHH
T ss_pred hHHHHH
Confidence 666543
No 195
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=64.54 E-value=25 Score=39.49 Aligned_cols=106 Identities=15% Similarity=0.141 Sum_probs=65.6
Q ss_pred CccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc-C-------CccCCceeeeCcc----------cccCCHHH----
Q 002230 662 RPGVKESVAICRSAGITVRMVTGDNINTAKAIAREC-G-------ILTDNGIAIEGPE----------FREKSDEE---- 719 (950)
Q Consensus 662 r~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~-g-------i~~~~~~vi~g~~----------~~~~~~~~---- 719 (950)
-|++.+.++.|+++|+++.++|+-....+..+.+.+ | +..--+.++.+.. |+....+.
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~~g~~~ 265 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVETGSLK 265 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCCCCccc
Confidence 569999999999999999999999999999999996 6 4332234444322 22211110
Q ss_pred Hhhh--hccccEEeecChhhHHHHHHHHhhhCCCEEEEEcCCc-cCHHhhh-cCCc
Q 002230 720 LSKL--IPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGT-NDAPALH-EADI 771 (950)
Q Consensus 720 ~~~~--~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~-ND~~al~-~Adv 771 (950)
.... +.+-+|++.-+-. .+-+.+... +..|+++||.. .|+-.-+ .++.
T Consensus 266 ~~~~~~l~~g~vY~gGn~~---~~~~~l~~~-~~~vlYvGD~i~~Di~~~kk~~Gw 317 (343)
T TIGR02244 266 WGEVDGLEPGKVYSGGSLK---QFHELLKWR-GKEVLYFGDHIYGDLLRSKKKRGW 317 (343)
T ss_pred CCccccccCCCeEeCCCHH---HHHHHHCCC-CCcEEEECCcchHHHHhhHHhcCc
Confidence 0000 1222344443332 344445555 78999999985 4666554 4544
No 196
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=58.92 E-value=1.2e+02 Score=28.78 Aligned_cols=45 Identities=16% Similarity=0.305 Sum_probs=28.5
Q ss_pred EEeecCh-hhHHHHHHHHhhhCCCEEEEEcCCcc--CHHhhhcCCcceeec
Q 002230 729 VMARSSP-MDKHTLVKHLRTTLGEVVAVTGDGTN--DAPALHEADIGLAMG 776 (950)
Q Consensus 729 v~ar~~P-~~K~~~V~~l~~~~g~~v~~vGDG~N--D~~al~~AdvGiamg 776 (950)
++++..+ -++ .+++.+..- +.+...|-|.| |.+++++-+|-++-.
T Consensus 42 ii~~~~~~~~~-~~l~~~~~L--k~I~~~~~G~d~id~~~a~~~gI~V~n~ 89 (133)
T PF00389_consen 42 IIVGSGTPLTA-EVLEAAPNL--KLISTAGAGVDNIDLEAAKERGIPVTNV 89 (133)
T ss_dssp EEESTTSTBSH-HHHHHHTT---SEEEESSSSCTTB-HHHHHHTTSEEEE-
T ss_pred EEEcCCCCcCH-HHHhcccee--EEEEEcccccCcccHHHHhhCeEEEEEe
Confidence 4444444 443 445555332 67888899998 788888888888644
No 197
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=57.69 E-value=4.3e+02 Score=34.11 Aligned_cols=42 Identities=19% Similarity=0.215 Sum_probs=31.6
Q ss_pred eCCeEEEEecCCcCCCcEEEeCCCCeecccEEEEeecceEEEc
Q 002230 244 RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINE 286 (950)
Q Consensus 244 R~g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g~~l~VDe 286 (950)
.-|....+...|.+|-|.+.++ |+-+=+|==.+.|++.-|+-
T Consensus 184 vpGDiV~l~~Gd~IPaDg~li~-g~~l~VDES~LTGES~PV~K 225 (902)
T PRK10517 184 VPGDIIKLAAGDMIPADLRILQ-ARDLFVAQASLTGESLPVEK 225 (902)
T ss_pred CCCCEEEECCCCEEeeeEEEEE-cCceEEEecCcCCCCCceec
Confidence 4688999999999999999887 44455677777777654443
No 198
>PTZ00445 p36-lilke protein; Provisional
Probab=57.55 E-value=91 Score=32.45 Aligned_cols=137 Identities=16% Similarity=0.193 Sum_probs=76.4
Q ss_pred HHHHHHHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEEe--eeeccCC----------CCccHHHHHHHHHHCCC
Q 002230 610 NHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIG--IVGIKDP----------MRPGVKESVAICRSAGI 677 (950)
Q Consensus 610 ~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG--~~~i~D~----------lr~~~~~~I~~l~~aGi 677 (950)
+.....++.+.+.|.|++++-+ |.|+++ .=|--+| ++|+.+.-+++|+++||
T Consensus 29 ~~~~~~v~~L~~~GIk~Va~D~----------------DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I 92 (219)
T PTZ00445 29 ESADKFVDLLNECGIKVIASDF----------------DLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNI 92 (219)
T ss_pred HHHHHHHHHHHHcCCeEEEecc----------------hhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCC
Confidence 3455667778889999987642 233332 0012223 79999999999999999
Q ss_pred EEEEEcCCCHHHHHHHHHHcCCcc-CCceeeeCcccccCCHHHHhhhhccccEEe------------------ecChhhH
Q 002230 678 TVRMVTGDNINTAKAIARECGILT-DNGIAIEGPEFREKSDEELSKLIPKIQVMA------------------RSSPMDK 738 (950)
Q Consensus 678 ~v~m~TGD~~~ta~~ia~~~gi~~-~~~~vi~g~~~~~~~~~~~~~~~~~~~v~a------------------r~~P~~K 738 (950)
+|.++|=-...+ +.. .....|.|.++-+..-+.-..-..--+|+| ...|+-|
T Consensus 93 ~v~VVTfSd~~~---------~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~~~gl~KPdp~iK 163 (219)
T PTZ00445 93 KISVVTFSDKEL---------IPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYRPLGLDAPMPLDK 163 (219)
T ss_pred eEEEEEccchhh---------ccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhhhhcccCCCccch
Confidence 999999665543 111 123455555443211110000000001222 2234454
Q ss_pred HHHHHHHhhhCC---CEEEEEcCCccCHHhhhcCCc
Q 002230 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADI 771 (950)
Q Consensus 739 ~~~V~~l~~~~g---~~v~~vGDG~ND~~al~~Adv 771 (950)
.-=.+.+.+++| +.++++=|....+.+-++.|+
T Consensus 164 ~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi 199 (219)
T PTZ00445 164 SYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGY 199 (219)
T ss_pred HHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCC
Confidence 443344444434 568888999888888777654
No 199
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=51.51 E-value=5.3e+02 Score=33.29 Aligned_cols=163 Identities=11% Similarity=0.071 Sum_probs=80.6
Q ss_pred CCeEEEEecCCcCCCcEEEeCCCCeecccEEEEeecceEEEcccc--cCCC--Cccccc---CCCCeEEeccEEeeceEE
Q 002230 245 NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSL--TGES--EPVNVN---ALNPFLLSGTKVQNGSCK 317 (950)
Q Consensus 245 ~g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g~~l~VDeS~L--TGEs--~pv~k~---~~~~~l~sGt~v~~G~~~ 317 (950)
-|....+...|.+|-|.+.++.. ..=+|=-.+.|++.-|+-..- .++. .+..+. -.+..+.+|+-..-=...
T Consensus 137 ~GDiv~l~~Gd~IPaDg~ii~g~-~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~t 215 (884)
T TIGR01522 137 PGDLVCLSVGDRVPADLRIVEAV-DLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGT 215 (884)
T ss_pred cCCEEEecCCCEEeeeEEEEEcC-ceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEe
Confidence 58889999999999999999753 344676677777643433221 1111 111111 123357777644332223
Q ss_pred EEEEEEeeccchhhHhhhhcCCCCC-CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHH
Q 002230 318 MLVTTVGMRTQWGKLMATLSEGGDD-ETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALE 396 (950)
Q Consensus 318 ~~V~~~G~~T~~g~i~~~~~~~~~~-~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (950)
+.=+..|.= .++++...+.... +..+.+....+......++.++.++.+... ..+. . .
T Consensus 216 G~~T~~gki---~~~v~~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~----------------~ 274 (884)
T TIGR01522 216 GSNTEFGAV---FKMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGWFQG-KDWL-E----------------M 274 (884)
T ss_pred cCccHHHHH---HHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCHH-H----------------H
Confidence 333434432 2333333332222 223344344444333222222233333221 0110 0 1
Q ss_pred HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Q 002230 397 ILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMK 429 (950)
Q Consensus 397 ~~~~~~~~i~ilvvavP~~L~lav~l~l~~~~~ 429 (950)
+...+..++..+..+.|.++++++..+.....+
T Consensus 275 ~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak 307 (884)
T TIGR01522 275 FTISVSLAVAAIPEGLPIIVTVTLALGVLRMSK 307 (884)
T ss_pred HHHHHHHHHHHccchHHHHHHHHHHHHHHHHhh
Confidence 223445566667778888888888888766554
No 200
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=51.40 E-value=42 Score=33.69 Aligned_cols=41 Identities=17% Similarity=0.266 Sum_probs=31.8
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEc-CCCHHHHHHHHHHcCCc
Q 002230 660 PMRPGVKESVAICRSAGITVRMVT-GDNINTAKAIARECGIL 700 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~T-GD~~~ta~~ia~~~gi~ 700 (950)
.+-|+++++++.|++.|+++.++| -+.+.-|+.+-+.+++.
T Consensus 45 ~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 45 SLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp ---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred EeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 467899999999999999999999 58899999999999997
No 201
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=50.25 E-value=6.9e+02 Score=32.35 Aligned_cols=160 Identities=13% Similarity=0.077 Sum_probs=84.8
Q ss_pred eCCeEEEEecCCcCCCcEEEeCCCCeecccEEEEeecceEEEcccc------------cCCCCc-cccc---CCCCeEEe
Q 002230 244 RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSL------------TGESEP-VNVN---ALNPFLLS 307 (950)
Q Consensus 244 R~g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g~~l~VDeS~L------------TGEs~p-v~k~---~~~~~l~s 307 (950)
.-|....+...|.+|-|.+.++.. -+=+|=-.+.|++.-|+-... .|+..+ ..+. -.+..+.+
T Consensus 173 v~GDiV~l~~Gd~IPaDg~li~g~-~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~ 251 (903)
T PRK15122 173 VPGDIVHLSAGDMIPADVRLIESR-DLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVS 251 (903)
T ss_pred CCCCEEEECCCCEEeeeEEEEEcC-ceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEe
Confidence 368899999999999999988743 355676677777644444321 122111 1111 12345777
Q ss_pred ccEEeeceEEEEEEEEeeccchhhHhhhhcCCCC---CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCC
Q 002230 308 GTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGD---DETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEG 384 (950)
Q Consensus 308 Gt~v~~G~~~~~V~~~G~~T~~g~i~~~~~~~~~---~~tplq~~l~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~ 384 (950)
|+-..-=...+.=+..|.=. +++..-..... +-.++.+.+..++.++.++.++++.+...-+. .
T Consensus 252 G~~~~~V~atG~~T~~gkI~---~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~~~~~~-~--------- 318 (903)
T PRK15122 252 GTATAVVVATGSRTYFGSLA---KSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFTKGDWL-E--------- 318 (903)
T ss_pred eeEEEEEEEeccccHhhHHH---HHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCHH-H---------
Confidence 77443322222223333221 11111111111 11346667777777777666655543221111 0
Q ss_pred CccccCCcchHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Q 002230 385 THWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAM 428 (950)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~lav~l~l~~~~ 428 (950)
.+...+..++.....+.|..+++++..+.....
T Consensus 319 -----------~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~ma 351 (903)
T PRK15122 319 -----------ALLFALAVAVGLTPEMLPMIVSSNLAKGAIAMA 351 (903)
T ss_pred -----------HHHHHHHHHHHHccchHHHHHHHHHHHHHHHHH
Confidence 123345566777777778888888877765444
No 202
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=49.64 E-value=3.1e+02 Score=35.25 Aligned_cols=41 Identities=15% Similarity=0.188 Sum_probs=31.3
Q ss_pred eCCeEEEEecCCcCCCcEEEeCCCCeecccEEEEeecceEEE
Q 002230 244 RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLIN 285 (950)
Q Consensus 244 R~g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g~~l~VD 285 (950)
.-|....+...|.+|-|.+.++ |.-+=+|=-.+.|++.-|+
T Consensus 150 v~GDiV~l~~Gd~VPaDg~li~-g~~l~VDES~LTGES~PV~ 190 (867)
T TIGR01524 150 VPGDLIELAAGDIIPADARVIS-ARDLFINQSALTGESLPVE 190 (867)
T ss_pred CCCCEEEECCCCEEcccEEEEe-cCceEEEcccccCCCCccc
Confidence 3588999999999999999887 4445567777778774443
No 203
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=49.43 E-value=1.9e+02 Score=30.15 Aligned_cols=193 Identities=14% Similarity=0.132 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhhcCCeEEEEeCCeEEEEecCCcCCCcEEEeCCCCeecccEEEEeecc-eEEEccc
Q 002230 210 ILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFS-VLINESS 288 (950)
Q Consensus 210 illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g~~-l~VDeS~ 288 (950)
++++++++.+.+++++++.++..+..+... ..+...+ +.-|....+...|.+|-|.+.+...+ +-+|=-.
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~v----~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~l 72 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLN-----PQKKVTV----IRDGRWQKIPSSELVPGDIIILKAGDIVPADGIL 72 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTS-----SSEEEEE----EETTEEEEEEGGGT-TTSEEEEETTEBESSEEEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccC-----CCccEEE----EeccccccchHhhccceeeeecccccccccCccc
Confidence 566677777778888777777665555432 1221333 23379999999999999999998543 2223333
Q ss_pred cc-CCCCcccc---cCCCCeE-E-----eccEEeeceEEEEEEEEeeccchhhH---hhhhcCCCCCCChhHHHHHHHHH
Q 002230 289 LT-GESEPVNV---NALNPFL-L-----SGTKVQNGSCKMLVTTVGMRTQWGKL---MATLSEGGDDETPLQVKLNGVAT 355 (950)
Q Consensus 289 LT-GEs~pv~k---~~~~~~l-~-----sGt~v~~G~~~~~V~~~G~~T~~g~i---~~~~~~~~~~~tplq~~l~~~a~ 355 (950)
|. |...--+- ....|.- . .|..+..|+...-=...|.-+..|.- .+........ .+-...+++...
T Consensus 73 l~~g~~~vd~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~-~~~~~~~~~~~~ 151 (230)
T PF00122_consen 73 LESGSAYVDESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKS-ESKKSPLERKLN 151 (230)
T ss_dssp EESSEEEEECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTS-CSS-THHHHHHH
T ss_pred eeccccccccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccc-cccchhhhhhhH
Confidence 33 32111000 0112222 2 67778888654422223333333331 2222222222 223345666655
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHH----HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Q 002230 356 IIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEIL----EFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKM 431 (950)
Q Consensus 356 ~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~ilvvavP~~L~lav~l~l~~~~~~~ 431 (950)
.+..+.+.+.++..++.+ +. .+. ..+...+...+..+=...|.++++++..+....
T Consensus 152 ~~~~~~~~~~~~~~~~~~---~~-----------------~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~ 211 (230)
T PF00122_consen 152 KIAKILIIIILAIAILVF---II-----------------WFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIA 211 (230)
T ss_dssp HHHHHHHHHHHHHHHHHH---HH-----------------CHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHH
T ss_pred HHHHHHHhcccccchhhh---cc-----------------ceecccccccccccccccceeeeecccceeehHHHHHHHH
Confidence 555544433332222211 00 011 112344444445555567777777777666544
Q ss_pred h
Q 002230 432 M 432 (950)
Q Consensus 432 ~ 432 (950)
+
T Consensus 212 ~ 212 (230)
T PF00122_consen 212 A 212 (230)
T ss_dssp H
T ss_pred H
Confidence 3
No 204
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=43.42 E-value=28 Score=37.70 Aligned_cols=45 Identities=20% Similarity=0.322 Sum_probs=38.2
Q ss_pred EeeeeccCCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH
Q 002230 652 IGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE 696 (950)
Q Consensus 652 lG~~~i~D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~ 696 (950)
=|.+.--+.+=|++.++|+.|+++|++++++|--...+...++.+
T Consensus 16 DGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~ 60 (269)
T COG0647 16 DGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAAR 60 (269)
T ss_pred cCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Confidence 377778888999999999999999999999998887777655544
No 205
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=41.89 E-value=3.3e+02 Score=29.85 Aligned_cols=166 Identities=14% Similarity=0.175 Sum_probs=87.8
Q ss_pred CCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeeccCCCCc--cHHHHHHHHHHCCCEEEE
Q 002230 604 LNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRP--GVKESVAICRSAGITVRM 681 (950)
Q Consensus 604 l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~--~~~~~I~~l~~aGi~v~m 681 (950)
+.++.++++.+.++.+..+|.+. .+| ++-..|.+-. -++..++.|++.|+.+.+
T Consensus 11 va~~i~~~lk~~i~~l~~~g~~p-~La-----------------------ii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~ 66 (285)
T PRK14189 11 LSKQLRAEAAQRAAALTARGHQP-GLA-----------------------VILVGDNPASQVYVRNKVKACEDNGFHSLK 66 (285)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCC-eEE-----------------------EEEeCCCchHHHHHHHHHHHHHHcCCEEEE
Confidence 44566777888888887777543 333 3333333332 246778999999999877
Q ss_pred EcCCC---HHHHHHHHHHcCCccC-CceeeeCcccccCCHHHH------------------hhhhccccEEeecChhhHH
Q 002230 682 VTGDN---INTAKAIARECGILTD-NGIAIEGPEFREKSDEEL------------------SKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 682 ~TGD~---~~ta~~ia~~~gi~~~-~~~vi~g~~~~~~~~~~~------------------~~~~~~~~v~ar~~P~~K~ 739 (950)
.-=+. .......-++++=+.. +++.+.-+--..+++.++ ..++..-..|.-|||.-=.
T Consensus 67 ~~l~~~~~~~~l~~~I~~lN~d~~V~GIlvq~Plp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~PcTp~aii 146 (285)
T PRK14189 67 DRYPADLSEAELLARIDELNRDPKIHGILVQLPLPKHIDSHKVIEAIAPEKDVDGFHVANAGALMTGQPLFRPCTPYGVM 146 (285)
T ss_pred EECCCCCCHHHHHHHHHHHcCCCCCCeEEEeCCCCCCCCHHHHHhhcCcccCcccCChhhhhHhhCCCCCCcCCCHHHHH
Confidence 64332 3334444455543322 233332222222333322 2222222234556776555
Q ss_pred HHHHHHhhh-CCCEEEEEcCCcc-C---HHhhhcCCcceeecCCCc-H--HHHhcCCEEecc
Q 002230 740 TLVKHLRTT-LGEVVAVTGDGTN-D---APALHEADIGLAMGIAGT-E--VAKESADVIILD 793 (950)
Q Consensus 740 ~~V~~l~~~-~g~~v~~vGDG~N-D---~~al~~AdvGiamg~~g~-~--~ak~~aDivl~~ 793 (950)
++++..+-. .|+.|.++|-|.. = +.+|...+.-+.+-.+.+ + ..-..||+++.-
T Consensus 147 ~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~~~~~~ADIVV~a 208 (285)
T PRK14189 147 KMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLAAHTRQADIVVAA 208 (285)
T ss_pred HHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHHHHhhhCCEEEEc
Confidence 555554311 3789999999876 2 345555554443322222 2 244679999864
No 206
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=38.98 E-value=4.3e+02 Score=29.21 Aligned_cols=166 Identities=16% Similarity=0.207 Sum_probs=87.3
Q ss_pred CCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeeccCCCCc--cHHHHHHHHHHCCCEEEE
Q 002230 604 LNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRP--GVKESVAICRSAGITVRM 681 (950)
Q Consensus 604 l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~--~~~~~I~~l~~aGi~v~m 681 (950)
+.++.++++.+.++.+..+|.+. .+| ++-.-|.+-. -++.-++.|++.|++..+
T Consensus 12 iA~~i~~~lk~~i~~l~~~g~~P-~La-----------------------iI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~ 67 (301)
T PRK14194 12 AAARVLAQVREDVRTLKAAGIEP-ALA-----------------------VILVGNDPASQVYVRNKILRAEEAGIRSLE 67 (301)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCC-eEE-----------------------EEEeCCChhHHHHHHHHHHHHHHcCCEEEE
Confidence 34556677888888887777543 222 3333333322 346678889999998765
Q ss_pred Ec--CC-CHHHHHHHHHHcCCccC-CceeeeCcccccCCHH------------------HHhhhhccccEEeecChhhHH
Q 002230 682 VT--GD-NINTAKAIARECGILTD-NGIAIEGPEFREKSDE------------------ELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 682 ~T--GD-~~~ta~~ia~~~gi~~~-~~~vi~g~~~~~~~~~------------------~~~~~~~~~~v~ar~~P~~K~ 739 (950)
.- .+ ..+...+.-++++=+.. +++.+.-+--..+++. .+.++...-.-|.-|||.-=.
T Consensus 68 ~~l~~~~t~~~l~~~I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~aii 147 (301)
T PRK14194 68 HRLPADTSQARLLALIAELNADPSVNGILLQLPLPAHIDEARVLQAINPLKDVDGFHSENVGGLSQGRDVLTPCTPSGCL 147 (301)
T ss_pred EECCCCCCHHHHHHHHHHHcCCCCCCeEEEeCCCCCCCCHHHHHhccCchhccCccChhhhhHHhcCCCCCCCCcHHHHH
Confidence 42 22 23334444444443322 2233322211222222 222222222235567777666
Q ss_pred HHHHHHhhh-CCCEEEEEcCC-ccCHH---hhhcCCcceeecCCCc---HHHHhcCCEEecc
Q 002230 740 TLVKHLRTT-LGEVVAVTGDG-TNDAP---ALHEADIGLAMGIAGT---EVAKESADVIILD 793 (950)
Q Consensus 740 ~~V~~l~~~-~g~~v~~vGDG-~ND~~---al~~AdvGiamg~~g~---~~ak~~aDivl~~ 793 (950)
++++...-. .|+.|+++|-| .-=.| +|..++..+.+=.+.+ ..+...||+++.-
T Consensus 148 ~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~ADIVIsa 209 (301)
T PRK14194 148 RLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQADIVVAA 209 (301)
T ss_pred HHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCCEEEEe
Confidence 666655321 37999999997 44333 5666666665431222 2244668999864
No 207
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=38.82 E-value=29 Score=29.35 Aligned_cols=53 Identities=23% Similarity=0.303 Sum_probs=34.0
Q ss_pred HHHHHHHhhhCCCEEEEEcCC-ccCHHhhhcCCcc-eeecCCCc---HHH---HhcCCEEecc
Q 002230 739 HTLVKHLRTTLGEVVAVTGDG-TNDAPALHEADIG-LAMGIAGT---EVA---KESADVIILD 793 (950)
Q Consensus 739 ~~~V~~l~~~~g~~v~~vGDG-~ND~~al~~AdvG-iamg~~g~---~~a---k~~aDivl~~ 793 (950)
..+.+.+... ...+.||||. ..|+.+-+++++- |.+. +|. +.. ...+|+|+.+
T Consensus 11 ~~a~~~~~~~-~~~~~~VGD~~~~Di~~a~~~G~~~ilV~-tG~~~~~~~~~~~~~pd~vv~~ 71 (75)
T PF13242_consen 11 EQALKRLGVD-PSRCVMVGDSLETDIEAAKAAGIDTILVL-TGVYSPEDLEKAEHKPDYVVDD 71 (75)
T ss_dssp HHHHHHHTSG-GGGEEEEESSTTTHHHHHHHTTSEEEEES-SSSSCCCGHHHSSSTTSEEESS
T ss_pred HHHHHHcCCC-HHHEEEEcCCcHhHHHHHHHcCCcEEEEC-CCCCCHHHHhccCCCCCEEECC
Confidence 3344444333 3569999999 9999999999874 3332 332 222 3578998744
No 208
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=38.66 E-value=5.6e+02 Score=28.06 Aligned_cols=165 Identities=15% Similarity=0.202 Sum_probs=86.1
Q ss_pred CCHHHHHHHHHHHHHHHhc-ccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeeccCCCCcc--HHHHHHHHHHCCCEEE
Q 002230 604 LNEAAVNHLNETIEKFASE-ALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPG--VKESVAICRSAGITVR 680 (950)
Q Consensus 604 l~~~~~~~~~~~~~~~a~~-glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~--~~~~I~~l~~aGi~v~ 680 (950)
+.++.++++.+.++.+..+ |.+. . ++++-..|..-.. ++..++.|++.|+++.
T Consensus 10 ia~~i~~~lk~~v~~l~~~~g~~P-~-----------------------Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~ 65 (284)
T PRK14179 10 LAQKMQAELAEKVAKLKEEKGIVP-G-----------------------LVVILVGDNPASQVYVRNKERSALAAGFKSE 65 (284)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCc-e-----------------------EEEEEeCCChhHHHHHHHHHHHHHHcCCEEE
Confidence 4455667777777777665 5432 2 2333344443333 3566899999999877
Q ss_pred EEcCCC---HHHHHHHHHHcCCccC-CceeeeCcccccCC------------------HHHHhhhhccccEEeecChhhH
Q 002230 681 MVTGDN---INTAKAIARECGILTD-NGIAIEGPEFREKS------------------DEELSKLIPKIQVMARSSPMDK 738 (950)
Q Consensus 681 m~TGD~---~~ta~~ia~~~gi~~~-~~~vi~g~~~~~~~------------------~~~~~~~~~~~~v~ar~~P~~K 738 (950)
...=+. .....+.-++++=... +++.+.-+--..++ +..+..+...-.-|.-|||.-=
T Consensus 66 ~~~l~~~~~~~~l~~~I~~lN~d~~V~GIivqlPlp~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~av 145 (284)
T PRK14179 66 VVRLPETISQEELLDLIERYNQDPTWHGILVQLPLPKHINEEKILLAIDPKKDVDGFHPMNTGHLWSGRPVMIPCTPAGI 145 (284)
T ss_pred EEECCCCCCHHHHHHHHHHHhCCCCCCEEEEcCCCCCCCCHHHHHhccCccccccccCHhhHHHHhCCCCCCcCCCHHHH
Confidence 654332 3334444444433221 22333222112222 2222233222223556777766
Q ss_pred HHHHHHHhhh-CCCEEEEEcC-CccCHH---hhhcCCcceeecCCCcH---HHHhcCCEEec
Q 002230 739 HTLVKHLRTT-LGEVVAVTGD-GTNDAP---ALHEADIGLAMGIAGTE---VAKESADVIIL 792 (950)
Q Consensus 739 ~~~V~~l~~~-~g~~v~~vGD-G~ND~~---al~~AdvGiamg~~g~~---~ak~~aDivl~ 792 (950)
.++++...-. .|+.++++|- |.-=.| +|..++.-+.+-.+-++ .....||+++.
T Consensus 146 i~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~ 207 (284)
T PRK14179 146 MEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVV 207 (284)
T ss_pred HHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEE
Confidence 6666554321 3789999999 555544 55556555544212221 23467999986
No 209
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=37.07 E-value=28 Score=37.03 Aligned_cols=97 Identities=14% Similarity=0.045 Sum_probs=50.5
Q ss_pred CccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHH
Q 002230 662 RPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTL 741 (950)
Q Consensus 662 r~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~ 741 (950)
-++..++++.|++.|++. ++|......+.......|.. .-+ ..+...-.+...+...+|+-=..+
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g---------~~~-----~~i~~~g~~~~~~gKP~~~~~~~~ 204 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAG---------YYA-----ELIKQLGGKVIYSGKPYPAIFHKA 204 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEeccc---------HHH-----HHHHHhCCcEecCCCCCHHHHHHH
Confidence 478899999999999997 77776544433222222211 000 000000011111222233222333
Q ss_pred HHHHhhhCCCEEEEEcCC-ccCHHhhhcCCcce
Q 002230 742 VKHLRTTLGEVVAVTGDG-TNDAPALHEADIGL 773 (950)
Q Consensus 742 V~~l~~~~g~~v~~vGDG-~ND~~al~~AdvGi 773 (950)
.+.+.....+.++|+||. .+|..+=+.|++-.
T Consensus 205 ~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~ 237 (242)
T TIGR01459 205 LKECSNIPKNRMLMVGDSFYTDILGANRLGIDT 237 (242)
T ss_pred HHHcCCCCcccEEEECCCcHHHHHHHHHCCCeE
Confidence 333322112479999999 59999988888743
No 210
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=36.51 E-value=1e+02 Score=31.04 Aligned_cols=107 Identities=15% Similarity=0.186 Sum_probs=64.2
Q ss_pred cHHHHHHHHHHCCCEEEEEcCCCHHH-HHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHH
Q 002230 664 GVKESVAICRSAGITVRMVTGDNINT-AKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLV 742 (950)
Q Consensus 664 ~~~~~I~~l~~aGi~v~m~TGD~~~t-a~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V 742 (950)
|.-++++++++.|-++.+++=.+... +..+.+-+|+. +..+.-.++++=...+
T Consensus 65 Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~--------------------------i~~~~~~~~~e~~~~i 118 (176)
T PF06506_consen 65 DILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGVD--------------------------IKIYPYDSEEEIEAAI 118 (176)
T ss_dssp HHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT-E--------------------------EEEEEESSHHHHHHHH
T ss_pred HHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCCc--------------------------eEEEEECCHHHHHHHH
Confidence 34455555555565666665555443 45555555553 3356667788888999
Q ss_pred HHHhhhCCCEEEEEcCCccCHHhhhcCCcceeecCCCcHHHHhcCCEEeccCChhHHHHHHHHHHHHHHHHHH
Q 002230 743 KHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQK 815 (950)
Q Consensus 743 ~~l~~~~g~~v~~vGDG~ND~~al~~AdvGiamg~~g~~~ak~~aDivl~~~~~~~i~~~i~~gR~~~~~i~k 815 (950)
+.++.. |-.| .+|++.- ...-+ +..-..++...+..++..++.+++++++..++
T Consensus 119 ~~~~~~-G~~v-iVGg~~~-~~~A~----------------~~gl~~v~i~sg~esi~~Al~eA~~i~~~~~~ 172 (176)
T PF06506_consen 119 KQAKAE-GVDV-IVGGGVV-CRLAR----------------KLGLPGVLIESGEESIRRALEEALRIARARRR 172 (176)
T ss_dssp HHHHHT-T--E-EEESHHH-HHHHH----------------HTTSEEEESS--HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHc-CCcE-EECCHHH-HHHHH----------------HcCCcEEEEEecHHHHHHHHHHHHHHHHHHHH
Confidence 999888 7544 4576631 11111 22334667777899999999999999887764
No 211
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=35.83 E-value=44 Score=31.20 Aligned_cols=39 Identities=28% Similarity=0.316 Sum_probs=30.4
Q ss_pred CccHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHcCCc
Q 002230 662 RPGVKESVAICRSAGIT-VRMVTGDNINTAKAIARECGIL 700 (950)
Q Consensus 662 r~~~~~~I~~l~~aGi~-v~m~TGD~~~ta~~ia~~~gi~ 700 (950)
.+.+.+.+++|.+.|++ +|+.+|.....+...|++.|+.
T Consensus 65 ~~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi~ 104 (116)
T PF13380_consen 65 PDKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGIR 104 (116)
T ss_dssp HHHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-E
T ss_pred HHHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCCE
Confidence 45679999999999996 9999999999999999999974
No 212
>TIGR00216 ispH_lytB (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming). Escherichia coli LytB protein had been found to regulate the activity of RelA (guanosine 3',5'-bispyrophosphate synthetase I), which in turn controls the level of a regulatory metabolite. It is involved in penicillin tolerance and the stringent response.
Probab=34.93 E-value=2.5e+02 Score=30.63 Aligned_cols=172 Identities=17% Similarity=0.201 Sum_probs=96.5
Q ss_pred EEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCC-----CCCC--------
Q 002230 576 FRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF-----SADA-------- 642 (950)
Q Consensus 576 ~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~-----~~~~-------- 642 (950)
+.+-.-|.+..+.+.... .+-..+.-+=....++...+.+++++|+.++.++.+.-++-. ..+.
T Consensus 69 ViirAHGv~~~~~~~~~~---~gl~viDaTCP~V~kv~~~v~~~~~~Gy~iiiiG~~~HpEv~gi~g~~~~~~~vv~~~~ 145 (280)
T TIGR00216 69 VIIRAHGVPPEVREELEK---KGLEVIDATCPLVTKVHNAVKKYAKEGYHVILIGKKNHPEVIGTRGYAPDKAIVVETLE 145 (280)
T ss_pred EEEeCCCCCHHHHHHHHH---CCCeEEeCCCcccHHHHHHHHHHHhCCCEEEEEeCCCCCeeeeeccCcCCCEEEECCHH
Confidence 334445777666654331 111233333234567888899999999999999976554320 0000
Q ss_pred --CCCCCceEEEeeeeccCCCCccHHHHHHHHHHCC--C------EEEEEcCCCHHHHHHHHHHcCCccCCceeeeCccc
Q 002230 643 --PIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAG--I------TVRMVTGDNINTAKAIARECGILTDNGIAIEGPEF 712 (950)
Q Consensus 643 --~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~aG--i------~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~ 712 (950)
+.+. ...-++++.=--..+.+..+.++.|++.. . .+.-.|-+.+..+..+|+++.+. +
T Consensus 146 d~~~l~-~~~~v~vvsQTT~~~~~~~~i~~~l~~~~~~~~~~~~nTIC~AT~~RQ~a~~~la~~vD~m----i------- 213 (280)
T TIGR00216 146 DLENFK-VEDLLGVVSQTTLSQEDTKEIVAELKARVPQKEVPVFNTICYATQNRQDAVKELAPEVDLM----I------- 213 (280)
T ss_pred HHHhCC-CCCcEEEEEcCCCcHHHHHHHHHHHHHhCCCcCCCCCCCcccccHHHHHHHHHHHhhCCEE----E-------
Confidence 0000 01225666655555666777777777755 1 25566777788888888876654 2
Q ss_pred ccCCHHHHhhhhccccEEeecChhhHHHHHHHHhhhCCCEEEEEcCCc-cCHHhhhcC-CcceeecCCCc
Q 002230 713 REKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGT-NDAPALHEA-DIGLAMGIAGT 780 (950)
Q Consensus 713 ~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~-ND~~al~~A-dvGiamg~~g~ 780 (950)
|.+......=.++.+..++. |..+..+.+.. -|...|+.+ .|||.-| .+|
T Consensus 214 ----------------VVGg~nSsNT~rL~ei~~~~-~~~t~~Ie~~~el~~~~l~~~~~VGiTAG-AST 265 (280)
T TIGR00216 214 ----------------VIGGKNSSNTTRLYEIAEEH-GPPSYLIETAEELPEEWLKGVKVVGITAG-AST 265 (280)
T ss_pred ----------------EECCCCCchHHHHHHHHHHh-CCCEEEECChHHCCHHHhCCCCEEEEEec-CCC
Confidence 33332233333455555555 65566654432 245566654 3688777 444
No 213
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=34.93 E-value=76 Score=33.64 Aligned_cols=48 Identities=19% Similarity=0.246 Sum_probs=35.0
Q ss_pred eeeeccCCCCccHHHHHHHHHHCCCEEEEEc---CCCHHHHHHHHHH-cCCc
Q 002230 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVT---GDNINTAKAIARE-CGIL 700 (950)
Q Consensus 653 G~~~i~D~lr~~~~~~I~~l~~aGi~v~m~T---GD~~~ta~~ia~~-~gi~ 700 (950)
|++.-.+.+=|++.++|+.+++.|++++++| |...........+ .|+.
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~ 58 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVD 58 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCC
Confidence 3334445667799999999999999999998 6666555444444 6764
No 214
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=34.88 E-value=1.3e+02 Score=33.61 Aligned_cols=49 Identities=14% Similarity=0.140 Sum_probs=38.8
Q ss_pred eeeeccCCCCccHHHHHHHHHHC----CCEEEEEcCCC---HHH-HHHHHHHcCCcc
Q 002230 653 GIVGIKDPMRPGVKESVAICRSA----GITVRMVTGDN---INT-AKAIARECGILT 701 (950)
Q Consensus 653 G~~~i~D~lr~~~~~~I~~l~~a----Gi~v~m~TGD~---~~t-a~~ia~~~gi~~ 701 (950)
|++.-.+++-|++.++++.|++. |+++..+|-.. ..+ +..+.+++|+..
T Consensus 9 GvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~ 65 (321)
T TIGR01456 9 GVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDV 65 (321)
T ss_pred CceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCC
Confidence 66667788899999999999998 99999999554 333 555667888753
No 215
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=34.57 E-value=5.4e+02 Score=28.42 Aligned_cols=166 Identities=13% Similarity=0.159 Sum_probs=84.9
Q ss_pred CCHHHHHHHHHHHHHHHhc-ccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeeccCCCCc--cHHHHHHHHHHCCCEEE
Q 002230 604 LNEAAVNHLNETIEKFASE-ALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRP--GVKESVAICRSAGITVR 680 (950)
Q Consensus 604 l~~~~~~~~~~~~~~~a~~-glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~--~~~~~I~~l~~aGi~v~ 680 (950)
+.++.++++.+.++.+..+ |.+. .+ +++-..|.+-. -++..++.|++.||.+.
T Consensus 10 ~a~~i~~~i~~~v~~l~~~~g~~p-~L-----------------------a~i~vg~~~~s~~Yv~~k~k~a~~~Gi~~~ 65 (296)
T PRK14188 10 FAADVRATVAAEVARLKAAHGVTP-GL-----------------------AVVLVGEDPASQVYVRSKGKQTKEAGMASF 65 (296)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCC-eE-----------------------EEEEeCCChhHHHHHHHHHHHHHHcCCEEE
Confidence 3455666777777777665 5433 22 23333333322 24667899999999876
Q ss_pred EEc--CC-CHHHHHHHHHHcCCccC-CceeeeCcccccCCH------------------HHHhhhhccccEEeecChhhH
Q 002230 681 MVT--GD-NINTAKAIARECGILTD-NGIAIEGPEFREKSD------------------EELSKLIPKIQVMARSSPMDK 738 (950)
Q Consensus 681 m~T--GD-~~~ta~~ia~~~gi~~~-~~~vi~g~~~~~~~~------------------~~~~~~~~~~~v~ar~~P~~K 738 (950)
+.. .+ ......+.-++++=+.. +++.+.-+--..+++ ..+-.+...-..|.-|||.-=
T Consensus 66 ~~~l~~~~~~~el~~~i~~lN~d~~V~GIlvq~Plp~~~~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~PcTp~ai 145 (296)
T PRK14188 66 EHKLPADTSQAELLALIARLNADPAIHGILVQLPLPKHLDSEAVIQAIDPEKDVDGLHVVNAGRLATGETALVPCTPLGC 145 (296)
T ss_pred EEECCCCCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCHHHHHhccCcccccccCChhhHHHHhCCCCCCcCCCHHHH
Confidence 662 22 33334445555543322 223332221112222 222222222223556677666
Q ss_pred HHHHHHHhh-hCCCEEEEEcCC-ccC---HHhhhcCCcceeecCC---CcHHHHhcCCEEecc
Q 002230 739 HTLVKHLRT-TLGEVVAVTGDG-TND---APALHEADIGLAMGIA---GTEVAKESADVIILD 793 (950)
Q Consensus 739 ~~~V~~l~~-~~g~~v~~vGDG-~ND---~~al~~AdvGiamg~~---g~~~ak~~aDivl~~ 793 (950)
.++++...- ..|+.|+++|-+ .-= +.+|..++..+.+-.+ ..+.+...||+++.-
T Consensus 146 ~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~l~e~~~~ADIVIsa 208 (296)
T PRK14188 146 MMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRDLPAVCRRADILVAA 208 (296)
T ss_pred HHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCCHHHHHhcCCEEEEe
Confidence 666655432 137899999944 333 3356666666654311 122344668999853
No 216
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=34.48 E-value=7.7e+02 Score=31.95 Aligned_cols=201 Identities=19% Similarity=0.163 Sum_probs=108.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhh-----hcCCeEEE----EeCCeEEEEecCCcCCCcEEEeCCCCeecccEEEEe
Q 002230 208 MSILLVVFVTATSDYKQSLQFKDLDRE-----KKKITVQV----ARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVS 278 (950)
Q Consensus 208 ~~illv~~v~~~~~~~~~~~~~~l~~~-----~~~~~v~V----~R~g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~ 278 (950)
+...++.++.-.+..+.-.+.+++... .+....++ +.-|....+...|.+|-|...|+..+ .=+|=-.|.
T Consensus 114 ~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~-l~VdEs~LT 192 (917)
T COG0474 114 VINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSD-LEVDESALT 192 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecC-ceEEccccc
Confidence 334444577777776666666665441 12223332 34688999999999999999999887 566666677
Q ss_pred ecceEEEcccccC--CCCc--cccc---CCCCeEEeccEEeeceEEEEEEEEeeccchhhHhhhh-cCCCCCCChhHHHH
Q 002230 279 GFSVLINESSLTG--ESEP--VNVN---ALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATL-SEGGDDETPLQVKL 350 (950)
Q Consensus 279 g~~l~VDeS~LTG--Es~p--v~k~---~~~~~l~sGt~v~~G~~~~~V~~~G~~T~~g~i~~~~-~~~~~~~tplq~~l 350 (950)
|++.-|+=....- |..| ..+. -.+..+.+|.-..--..++.-|..|..+. .+... .....-...+.+..
T Consensus 193 GES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~---~~~~~~~~~t~l~~~l~~~~ 269 (917)
T COG0474 193 GESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIAR---LLPTKKEVKTPLQRKLNKLG 269 (917)
T ss_pred CCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHH---hhccccccCCcHHHHHHHHH
Confidence 7764333222211 1111 1222 22345777774443444555566666653 23332 12222223333444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCccccCCcchHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Q 002230 351 NGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMK 429 (950)
Q Consensus 351 ~~~a~~i~~~~l~~a~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilvvavP~~L~lav~l~l~~~~~ 429 (950)
..+..+....++++.++.+...-..+.. .+...+..+++.+-.+.|.-+-++..+....-.+
T Consensus 270 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~-----------------~~~~~v~l~va~IPegLp~~vti~la~g~~~mak 331 (917)
T COG0474 270 KFLLVLALVLGALVFVVGLFRGGNGLLE-----------------SFLTALALAVAAVPEGLPAVVTIALALGAQRMAK 331 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCccHHH-----------------HHHHHHHHHHhccccchHHHHHHHHHHHHHHHHh
Confidence 4444444333333333333320110000 2445677788888888888888888887765444
No 217
>COG2608 CopZ Copper chaperone [Inorganic ion transport and metabolism]
Probab=34.34 E-value=3.7 Score=34.75 Aligned_cols=55 Identities=13% Similarity=0.137 Sum_probs=46.0
Q ss_pred hccchhhhHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccC
Q 002230 43 ANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQIC 99 (950)
Q Consensus 43 ~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 99 (950)
..|....++++....++..+.|++....+.+.|++. ..+..++.+++..+||.+.
T Consensus 14 ~~C~~~V~~al~~v~gv~~v~v~l~~~~~~V~~d~~--~~~~~~i~~ai~~aGy~~~ 68 (71)
T COG2608 14 GHCVKTVEKALEEVDGVASVDVDLEKGTATVTFDSN--KVDIEAIIEAIEDAGYKVE 68 (71)
T ss_pred HHHHHHHHHHHhcCCCeeEEEEEcccCeEEEEEcCC--cCCHHHHHHHHHHcCCCee
Confidence 356778889999999999999999998899998765 5677788888999999764
No 218
>PF01455 HupF_HypC: HupF/HypC family; InterPro: IPR001109 The large subunit of [NiFe]-hydrogenase, as well as other nickel metalloenzymes, is synthesised as a precursor devoid of the metalloenzyme active site. This precursor then undergoes a complex post-translational maturation process that requires a number of accessory proteins. The hydrogenase expression/formation proteins (HupF/HypC) form a family of small proteins that are hydrogenase precursor-specific chaperones required for this maturation process []. They are believed to keep the hydrogenase precursor in a conformation accessible for metal incorporation [, ].; PDB: 3D3R_A 2Z1C_C 2OT2_A.
Probab=34.27 E-value=87 Score=26.29 Aligned_cols=33 Identities=30% Similarity=0.319 Sum_probs=24.8
Q ss_pred CCeEEEEeCCeEEEEec---CCcCCCcEEEeCCCCe
Q 002230 237 KITVQVARNGFRRKISI---YDLLPGDIVHLCMGDQ 269 (950)
Q Consensus 237 ~~~v~V~R~g~~~~I~~---~dLvvGDiV~l~~Gd~ 269 (950)
...+.|-.+|..++|+. .++.|||-|.+..|--
T Consensus 16 ~~~A~v~~~G~~~~V~~~lv~~v~~Gd~VLVHaG~A 51 (68)
T PF01455_consen 16 GGMAVVDFGGVRREVSLALVPDVKVGDYVLVHAGFA 51 (68)
T ss_dssp TTEEEEEETTEEEEEEGTTCTSB-TT-EEEEETTEE
T ss_pred CCEEEEEcCCcEEEEEEEEeCCCCCCCEEEEecChh
Confidence 44677778999999974 5788999999999953
No 219
>PF03120 DNA_ligase_OB: NAD-dependent DNA ligase OB-fold domain; InterPro: IPR004150 DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor []. This family is a small domain found after the adenylation domain DNA_ligase_N in NAD+-dependent ligases (IPR001679 from INTERPRO). OB-fold domains generally are involved in nucleic acid binding.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair; PDB: 2OWO_A 1TAE_A 3UQ8_A 1DGS_A 1V9P_B 3SGI_A.
Probab=33.99 E-value=19 Score=31.32 Aligned_cols=22 Identities=36% Similarity=0.536 Sum_probs=16.2
Q ss_pred EecCCcCCCcEEEe-CCCCeecc
Q 002230 251 ISIYDLLPGDIVHL-CMGDQVPA 272 (950)
Q Consensus 251 I~~~dLvvGDiV~l-~~Gd~vPa 272 (950)
+.-.+|.+||.|.+ +.||.||-
T Consensus 45 i~~~~i~~Gd~V~V~raGdVIP~ 67 (82)
T PF03120_consen 45 IKELDIRIGDTVLVTRAGDVIPK 67 (82)
T ss_dssp HHHTT-BBT-EEEEEEETTTEEE
T ss_pred HHHcCCCCCCEEEEEECCCccce
Confidence 33478999999998 67999995
No 220
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=33.68 E-value=3.5e+02 Score=34.39 Aligned_cols=70 Identities=17% Similarity=0.153 Sum_probs=46.0
Q ss_pred HHHHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeecc-C----CCCccHHHHHHHHHHC-CCEEEEEcCCC
Q 002230 613 NETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIK-D----PMRPGVKESVAICRSA-GITVRMVTGDN 686 (950)
Q Consensus 613 ~~~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~-D----~lr~~~~~~I~~l~~a-Gi~v~m~TGD~ 686 (950)
...++.|.+..-|.+.+-| |.|+.....-. + .+-|++.++++.|.+. +..|+++||+.
T Consensus 496 ~~~~~~y~~a~~rll~LDy----------------DGTL~~~~~~~~~p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~ 559 (797)
T PLN03063 496 QDVIQQYSKSNNRLLILGF----------------YGTLTEPRNSQIKEMDLGLHPELKETLKALCSDPKTTVVVLSRSG 559 (797)
T ss_pred HHHHHHHHhccCeEEEEec----------------CccccCCCCCccccccCCCCHHHHHHHHHHHcCCCCEEEEEeCCC
Confidence 3455666666667776653 34444221100 1 2556788889998765 78899999999
Q ss_pred HHHHHHHHHHcC
Q 002230 687 INTAKAIARECG 698 (950)
Q Consensus 687 ~~ta~~ia~~~g 698 (950)
..+.......++
T Consensus 560 ~~~L~~~~~~~~ 571 (797)
T PLN03063 560 KDILDKNFGEYN 571 (797)
T ss_pred HHHHHHHhCCCC
Confidence 999888776533
No 221
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=33.67 E-value=65 Score=31.85 Aligned_cols=41 Identities=20% Similarity=0.102 Sum_probs=37.3
Q ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 002230 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (950)
Q Consensus 659 D~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~ 700 (950)
=.+||++.+.+++|++. +++.++|.-....|..+.+.++..
T Consensus 57 v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~ 97 (156)
T TIGR02250 57 TKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPD 97 (156)
T ss_pred EEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcC
Confidence 35799999999999955 999999999999999999999875
No 222
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=30.95 E-value=24 Score=35.61 Aligned_cols=14 Identities=36% Similarity=0.385 Sum_probs=12.5
Q ss_pred EeeCCccccccCce
Q 002230 453 ICSDKTGTLTTNHM 466 (950)
Q Consensus 453 I~~DKTGTLT~n~m 466 (950)
+|||.+||||.+.+
T Consensus 1 v~fD~DGTL~~~~~ 14 (192)
T PF12710_consen 1 VIFDFDGTLTDSDS 14 (192)
T ss_dssp EEEESBTTTBSSHH
T ss_pred eEEecCcCeecCCC
Confidence 69999999999883
No 223
>PRK01045 ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed
Probab=30.94 E-value=2.6e+02 Score=30.84 Aligned_cols=175 Identities=11% Similarity=0.137 Sum_probs=91.6
Q ss_pred cEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCC-----CCC--------
Q 002230 575 GFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF-----SAD-------- 641 (950)
Q Consensus 575 ~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~-----~~~-------- 641 (950)
.+.+..-|.+..+.+.... .+-..+.-+=....+++..+.+++.+|+.++.++.+.-++-. ...
T Consensus 68 ~ViirAHGv~~~~~~~~~~---~g~~viDaTCP~V~k~~~~v~~~~~~Gy~vvi~G~~~HpEv~gi~g~~~~~~~vv~~~ 144 (298)
T PRK01045 68 IVIFSAHGVSPAVREEAKE---RGLTVIDATCPLVTKVHKEVARMSREGYEIILIGHKGHPEVEGTMGQAPGGVYLVESP 144 (298)
T ss_pred EEEEeCCCCCHHHHHHHHH---CCCeEEeCCCccchHHHHHHHHHHhCCCEEEEEeCCCCCeeeeeccCcCCCEEEEcCH
Confidence 3344445777766654331 111222222234456888899999999999999966544320 000
Q ss_pred --CCCC-CCceEEEeeeeccCCCCccHHHHHHHHHHCCCEE--------EEEcCCCHHHHHHHHHHcCCccCCceeeeCc
Q 002230 642 --APIP-TEGYTCIGIVGIKDPMRPGVKESVAICRSAGITV--------RMVTGDNINTAKAIARECGILTDNGIAIEGP 710 (950)
Q Consensus 642 --~~~~-e~~l~~lG~~~i~D~lr~~~~~~I~~l~~aGi~v--------~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~ 710 (950)
.+.+ ..+..-++++.=--..+.+..+.++.+++..-.+ ...|-+.+..+..+|+++... +
T Consensus 145 ~e~~~l~~~~~~~v~vvsQTT~~~~~~~~i~~~l~~~~~~~~v~~~nTIC~aT~~RQ~a~~~La~~vD~m----i----- 215 (298)
T PRK01045 145 EDVAKLEVKDPDKLALVTQTTLSVDDTAEIIAALKERFPEIQGPPKDDICYATQNRQEAVKELAPQADLV----I----- 215 (298)
T ss_pred HHHhhcccCCCCcEEEEEcCCCcHHHHHHHHHHHHHhCcCcccCCCCCcchhhHHHHHHHHHHHhhCCEE----E-----
Confidence 0001 0111234555544445556666666666554222 335666677777777766543 1
Q ss_pred ccccCCHHHHhhhhccccEEeecChhhHHHHHHHHhhhCCCEEEEEcCCc-cCHHhhhc-CCcceeecCCCcH
Q 002230 711 EFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGT-NDAPALHE-ADIGLAMGIAGTE 781 (950)
Q Consensus 711 ~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~-ND~~al~~-AdvGiamg~~g~~ 781 (950)
|.+......=.++.+..++. |..+..+.+-. -|...|+. -.|||.-| .+|+
T Consensus 216 ------------------VVGg~~SsNT~kL~~i~~~~-~~~t~~Ie~~~el~~~~l~~~~~VGitaG-ASTP 268 (298)
T PRK01045 216 ------------------VVGSKNSSNSNRLREVAEEA-GAPAYLIDDASEIDPEWFKGVKTVGVTAG-ASAP 268 (298)
T ss_pred ------------------EECCCCCccHHHHHHHHHHH-CCCEEEECChHHCcHHHhcCCCEEEEEec-CCCC
Confidence 33332233333455555555 65566654322 24445553 36888877 4443
No 224
>PF15584 Imm44: Immunity protein 44
Probab=30.46 E-value=21 Score=31.41 Aligned_cols=19 Identities=26% Similarity=0.660 Sum_probs=15.4
Q ss_pred CCcEEEeCCCCeecccEEE
Q 002230 258 PGDIVHLCMGDQVPADGLF 276 (950)
Q Consensus 258 vGDiV~l~~Gd~vPaDgil 276 (950)
+.+-..|+.|++||||||-
T Consensus 13 ~~~~~~I~SG~~iP~~GIw 31 (94)
T PF15584_consen 13 PSEGGVIKSGQEIPCDGIW 31 (94)
T ss_pred CCCCCEEecCCCcccCCeE
Confidence 3455678899999999986
No 225
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=29.96 E-value=1.2e+03 Score=29.13 Aligned_cols=82 Identities=13% Similarity=0.079 Sum_probs=45.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcCCeEEEEeCCeEEEEecCCcCCCc-EEEeCCCCeecccEEEEeec
Q 002230 202 DGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGD-IVHLCMGDQVPADGLFVSGF 280 (950)
Q Consensus 202 d~~~i~~~illv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGD-iV~l~~Gd~vPaDgill~g~ 280 (950)
+++.+.+.+++.+++..+.+.+++.+.++..+......- +-.-.. +.-|. ...+...+.+|-|.++++..
T Consensus 64 ~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~----~~~a~v-----ir~g~~~~~V~~~eL~~GDiV~v~~G 134 (679)
T PRK01122 64 FNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKK----DTFARK-----LREPGAAEEVPATELRKGDIVLVEAG 134 (679)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----CCeEEE-----EECCCEEEEEEHHHcCCCCEEEEcCC
Confidence 344455555555666656566666554443333433211 111122 22355 67788889999999998843
Q ss_pred -ceEEEcccccCC
Q 002230 281 -SVLINESSLTGE 292 (950)
Q Consensus 281 -~l~VDeS~LTGE 292 (950)
.+-+|=-.+.|+
T Consensus 135 d~IPaDG~vieG~ 147 (679)
T PRK01122 135 EIIPADGEVIEGV 147 (679)
T ss_pred CEEEEEEEEEEcc
Confidence 345565566664
No 226
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=29.47 E-value=1.2e+02 Score=32.89 Aligned_cols=92 Identities=17% Similarity=0.157 Sum_probs=48.7
Q ss_pred CccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhh----c-cccEEeecChh
Q 002230 662 RPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI----P-KIQVMARSSPM 736 (950)
Q Consensus 662 r~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~----~-~~~v~ar~~P~ 736 (950)
-+++.++++.|++.|+ ..++|.-...... .-+.... ....+.+.+ . +...+...+|+
T Consensus 145 y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~----~~~~~~~-------------~~g~~~~~i~~~~g~~~~~~gKP~p~ 206 (279)
T TIGR01452 145 YAKLREACAHLREPGC-LFVATNRDPWHPL----SDGSRTP-------------GTGSLVAAIETASGRQPLVVGKPSPY 206 (279)
T ss_pred HHHHHHHHHHHhcCCC-EEEEeCCCCCCCC----cCCCccc-------------ChHHHHHHHHHHhCCceeccCCCCHH
Confidence 5688999999999898 5667654421110 0011000 000111111 0 11122333443
Q ss_pred hHHHHHHHHhhhCCCEEEEEcCCc-cCHHhhhcCCcc
Q 002230 737 DKHTLVKHLRTTLGEVVAVTGDGT-NDAPALHEADIG 772 (950)
Q Consensus 737 ~K~~~V~~l~~~~g~~v~~vGDG~-ND~~al~~AdvG 772 (950)
-=..+.+.+.-. .+.++||||.. .|+.+-+.|++-
T Consensus 207 ~~~~~~~~~~~~-~~~~lmIGD~~~tDI~~A~~aGi~ 242 (279)
T TIGR01452 207 MFECITENFSID-PARTLMVGDRLETDILFGHRCGMT 242 (279)
T ss_pred HHHHHHHHhCCC-hhhEEEECCChHHHHHHHHHcCCc
Confidence 323344444333 46899999994 999999999875
No 227
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=28.89 E-value=6.7e+02 Score=27.64 Aligned_cols=165 Identities=15% Similarity=0.228 Sum_probs=86.2
Q ss_pred CCHHHHHHHHHHHHHHHhc-ccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeeccCCCCc--cHHHHHHHHHHCCCEEE
Q 002230 604 LNEAAVNHLNETIEKFASE-ALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRP--GVKESVAICRSAGITVR 680 (950)
Q Consensus 604 l~~~~~~~~~~~~~~~a~~-glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~--~~~~~I~~l~~aGi~v~ 680 (950)
+.++.++++.+.++.+..+ |.+. .+ +++-..|.+-. -++..++.|++.|+++.
T Consensus 9 iA~~i~~~i~~~v~~l~~~~g~~P-~L-----------------------aii~vg~d~as~~Yv~~k~k~~~~~Gi~~~ 64 (295)
T PRK14174 9 VSLDLKNELKTRVEAYRAKTGKVP-GL-----------------------TVIIVGEDPASQVYVRNKAKSCKEIGMNST 64 (295)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCC-eE-----------------------EEEEeCCChHHHHHHHHHHHHHHHcCCEEE
Confidence 3455667777777777665 4432 22 23333333332 24677899999999876
Q ss_pred EEcCCC---HHHHHHHHHHcCCccC-CceeeeCcccccCCH------------------HHHhhhhccc--cEEeecChh
Q 002230 681 MVTGDN---INTAKAIARECGILTD-NGIAIEGPEFREKSD------------------EELSKLIPKI--QVMARSSPM 736 (950)
Q Consensus 681 m~TGD~---~~ta~~ia~~~gi~~~-~~~vi~g~~~~~~~~------------------~~~~~~~~~~--~v~ar~~P~ 736 (950)
..-=+. .....+.-++++-+.. +++.+.-+--..+++ ..+.+++..- .-|.-|||.
T Consensus 65 ~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~Plp~~id~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~~~PcTp~ 144 (295)
T PRK14174 65 VIELPADTTEEHLLKKIEDLNNDPDVHGILVQQPLPKQIDEFAVTLAIDPAKDVDGFHPENLGRLVMGHLDKCFVSCTPY 144 (295)
T ss_pred EEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCccccccccChhhHHHHhcCCCCCCcCCCCHH
Confidence 653332 3334444455543322 233332221112222 2222222111 234557777
Q ss_pred hHHHHHHHHhhh-CCCEEEEEcCCccC----HHhhh------cCCcceeecCCCcH--HHHhcCCEEecc
Q 002230 737 DKHTLVKHLRTT-LGEVVAVTGDGTND----APALH------EADIGLAMGIAGTE--VAKESADVIILD 793 (950)
Q Consensus 737 ~K~~~V~~l~~~-~g~~v~~vGDG~ND----~~al~------~AdvGiamg~~g~~--~ak~~aDivl~~ 793 (950)
-=.++++...-. .|+.|+++|-+..= +-||. .|.|-++.. ...+ ..-..||+++..
T Consensus 145 ail~ll~~y~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~atVt~~hs-~t~~l~~~~~~ADIvI~A 213 (295)
T PRK14174 145 GILELLGRYNIETKGKHCVVVGRSNIVGKPMANLMLQKLKESNCTVTICHS-ATKDIPSYTRQADILIAA 213 (295)
T ss_pred HHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHhccccCCCEEEEEeC-CchhHHHHHHhCCEEEEe
Confidence 666666654321 37999999998652 22443 356666554 2222 245779999864
No 228
>TIGR00612 ispG_gcpE 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase. Chlamydial members of the family have a long insert. The family is largely restricted to Bacteria, where it is widely but not universally distributed. No homology can be detected between the GcpE family and other proteins.
Probab=28.13 E-value=1.8e+02 Score=32.43 Aligned_cols=92 Identities=26% Similarity=0.312 Sum_probs=59.7
Q ss_pred HHHHHHHHHCCCE--EE-EEcCCCH---HHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHH
Q 002230 666 KESVAICRSAGIT--VR-MVTGDNI---NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 666 ~~~I~~l~~aGi~--v~-m~TGD~~---~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
.-.|-.|-..||- ++ =+|+|+. ..+..|-+.+|+-.....+++-+ -|+|+. -|-.
T Consensus 213 aigig~LL~~GIGDTIRVSLT~dP~~EV~va~~IL~slglr~~g~~iiSCP------------------tCGR~~-~dl~ 273 (346)
T TIGR00612 213 SAGIGILLARGIGDTIRVSLTDDPTHEVPVAFEILQSLGLRARGVEIVACP------------------SCGRTG-FDVE 273 (346)
T ss_pred HHHHHHHHhhCCCCeEEEECCCCcHHHHHHHHHHHHHcCCCcCCCeEEECC------------------CCCCcC-CCHH
Confidence 3446778788872 33 3688875 45678889999976543444332 244543 2333
Q ss_pred HHHHH----Hhhh-CCCEEEEEcCCccCHHhhhcCCcceeec
Q 002230 740 TLVKH----LRTT-LGEVVAVTGDGTNDAPALHEADIGLAMG 776 (950)
Q Consensus 740 ~~V~~----l~~~-~g~~v~~vGDG~ND~~al~~AdvGiamg 776 (950)
.+++. ++.. ..-.|++.|==+|-..--+.||+|||-|
T Consensus 274 ~~~~~ve~~l~~~~~~l~VAVMGCvVNGPGEak~ADiGIagg 315 (346)
T TIGR00612 274 KVVRRVQEALFHLKTPLKVAVMGCVVNGPGEAKHADIGISGG 315 (346)
T ss_pred HHHHHHHHHHhcCCCCCEEEEECceecCCchhhccCeeeecC
Confidence 33333 3321 1358999999999999999999999976
No 229
>PRK11507 ribosome-associated protein; Provisional
Probab=26.97 E-value=73 Score=26.90 Aligned_cols=26 Identities=19% Similarity=0.233 Sum_probs=21.8
Q ss_pred EEEeCCeEEEEecCCcCCCcEEEeCC
Q 002230 241 QVARNGFRRKISIYDLLPGDIVHLCM 266 (950)
Q Consensus 241 ~V~R~g~~~~I~~~dLvvGDiV~l~~ 266 (950)
.|..||+...-.-..|.+||+|.+.-
T Consensus 38 ~V~VNGeve~rRgkKl~~GD~V~~~g 63 (70)
T PRK11507 38 QVKVDGAVETRKRCKIVAGQTVSFAG 63 (70)
T ss_pred ceEECCEEecccCCCCCCCCEEEECC
Confidence 45569999888899999999999854
No 230
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=26.12 E-value=3.3e+02 Score=28.99 Aligned_cols=86 Identities=13% Similarity=0.128 Sum_probs=52.5
Q ss_pred CCccHHHHHHHHHHCCCEEEEEcCCCHHH----HHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChh
Q 002230 661 MRPGVKESVAICRSAGITVRMVTGDNINT----AKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 736 (950)
Q Consensus 661 lr~~~~~~I~~l~~aGi~v~m~TGD~~~t----a~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~ 736 (950)
+=||+.+-++...+.|.+|..+|-+.... ...=-++.|+..... ...++-+ .-.
T Consensus 123 ~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~---------------------~~~llkk-~~k 180 (274)
T COG2503 123 AVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLE---------------------SHLLLKK-DKK 180 (274)
T ss_pred cCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccc---------------------cceEEee-CCC
Confidence 45899999999999999999999987665 334445566653210 0001111 112
Q ss_pred hHHHHHHHHhhhCCCEEEEEcCCccCHHhhhcC
Q 002230 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEA 769 (950)
Q Consensus 737 ~K~~~V~~l~~~~g~~v~~vGDG~ND~~al~~A 769 (950)
.|..--+.+++- -++|+.+||..+|-......
T Consensus 181 ~Ke~R~~~v~k~-~~iVm~vGDNl~DF~d~~~k 212 (274)
T COG2503 181 SKEVRRQAVEKD-YKIVMLVGDNLDDFGDNAYK 212 (274)
T ss_pred cHHHHHHHHhhc-cceeeEecCchhhhcchhhh
Confidence 222222233333 47899999999997655433
No 231
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=25.31 E-value=4.7e+02 Score=31.06 Aligned_cols=148 Identities=18% Similarity=0.159 Sum_probs=76.7
Q ss_pred eCCeEEEEecCCcCCCcEEEeCCCCeecccEEEEeecceEEEcccccCCCCcccccCCCCeEEeccEEeeceEE------
Q 002230 244 RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCK------ 317 (950)
Q Consensus 244 R~g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g~~l~VDeS~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~------ 317 (950)
+-|....+...|.+|-|.+.++- ..=+|--.+.|++.-+.-.. |+. -..+.+++.|+....-...
T Consensus 53 ~~GDiv~v~~G~~iP~Dg~vl~g--~~~vdes~LTGEs~pv~k~~--g~~-----v~~gs~~~~G~~~~~v~~~~~~s~~ 123 (499)
T TIGR01494 53 VPGDIVLVKSGEIVPADGVLLSG--SCFVDESNLTGESVPVLKTA--GDA-----VFAGTYVFNGTLIVVVSATGPNTFG 123 (499)
T ss_pred CCCCEEEECCCCEeeeeEEEEEc--cEEEEcccccCCCCCeeecc--CCc-----cccCcEEeccEEEEEEEEeccccHH
Confidence 45788888888899999888865 45566666677764333321 332 1234467788765532211
Q ss_pred ---EEEEEEeeccchhhHhhhhcCCCCC-CChhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH--HhhhcccCCCccccC
Q 002230 318 ---MLVTTVGMRTQWGKLMATLSEGGDD-ETPLQVKL-NGVATIIGKIGLFFAVVTFAVMVQG--LFTRKLQEGTHWTWS 390 (950)
Q Consensus 318 ---~~V~~~G~~T~~g~i~~~~~~~~~~-~tplq~~l-~~~a~~i~~~~l~~a~~~~~v~~~~--~~~~~~~~~~~~~~~ 390 (950)
+.++++|.+| +.. .....+.. ..+..+...+++++.+..+...... +..
T Consensus 124 ~~i~~~v~~~~~~------------k~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~~~~~~~------------ 179 (499)
T TIGR01494 124 GKIAVVVYTGFET------------KTPLQPKLDRLSDIIFILFVLLIALAVFLFWAIGLWDPNSIFK------------ 179 (499)
T ss_pred HHHHHHHHhcCCC------------CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHH------------
Confidence 1223344433 111 12222222 2333333333333333222221110 110
Q ss_pred CcchHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Q 002230 391 GDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMK 429 (950)
Q Consensus 391 ~~~~~~~~~~~~~~i~ilvvavP~~L~lav~l~l~~~~~ 429 (950)
.+..++...+.....++|.++|++...+.....+
T Consensus 180 -----~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~ 213 (499)
T TIGR01494 180 -----IFLRALILLVIAIPIALPLAVTIALAVGDARLAK 213 (499)
T ss_pred -----HHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Confidence 2445566666777778888888888887765554
No 232
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=24.75 E-value=1.2e+02 Score=28.12 Aligned_cols=38 Identities=18% Similarity=0.240 Sum_probs=29.4
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCC
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGI 699 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi 699 (950)
---+++.++++.+++.|++++.+|++.. ....+.+.|.
T Consensus 54 G~t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~~ 91 (119)
T cd05017 54 GNTEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHGV 91 (119)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcCC
Confidence 3456889999999999999999998874 3445665554
No 233
>PRK14042 pyruvate carboxylase subunit B; Provisional
Probab=24.62 E-value=2.8e+02 Score=33.86 Aligned_cols=116 Identities=14% Similarity=0.143 Sum_probs=76.3
Q ss_pred eeeccCCCCccHHHHHHHHHHCCCEEE-EEcC----CCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhcc--
Q 002230 654 IVGIKDPMRPGVKESVAICRSAGITVR-MVTG----DNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPK-- 726 (950)
Q Consensus 654 ~~~i~D~lr~~~~~~I~~l~~aGi~v~-m~TG----D~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~-- 726 (950)
++|+...++.=+...++...+.|+.++ +.+. ||...+...++++|......++.++.. ..+.+.+.+....
T Consensus 87 ~vGy~~~~d~vv~~~v~~a~~~Gidv~Rifd~lnd~~n~~~~i~~~k~~G~~~~~~i~yt~sp--~~t~e~~~~~ak~l~ 164 (596)
T PRK14042 87 LLGYRNYADDVVRAFVKLAVNNGVDVFRVFDALNDARNLKVAIDAIKSHKKHAQGAICYTTSP--VHTLDNFLELGKKLA 164 (596)
T ss_pred ccccccCChHHHHHHHHHHHHcCCCEEEEcccCcchHHHHHHHHHHHHcCCEEEEEEEecCCC--CCCHHHHHHHHHHHH
Confidence 677777777777889999999999854 4333 357778888999998776667777755 3444444333211
Q ss_pred ---cc------EEeecChhhHHHHHHHHhhhCCCEEEEEcCCccC-----HHhhhcCCcce
Q 002230 727 ---IQ------VMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTND-----APALHEADIGL 773 (950)
Q Consensus 727 ---~~------v~ar~~P~~K~~~V~~l~~~~g~~v~~vGDG~ND-----~~al~~AdvGi 773 (950)
+. -.+-++|.+=.++|+.+++.++-.+.+ .+.|| +.++++++.|+
T Consensus 165 ~~Gad~I~IkDtaG~l~P~~v~~lv~alk~~~~ipi~~--H~Hnt~Gla~an~laAieaGa 223 (596)
T PRK14042 165 EMGCDSIAIKDMAGLLTPTVTVELYAGLKQATGLPVHL--HSHSTSGLASICHYEAVLAGC 223 (596)
T ss_pred HcCCCEEEeCCcccCCCHHHHHHHHHHHHhhcCCEEEE--EeCCCCCcHHHHHHHHHHhCC
Confidence 11 234678999999999999876544433 22333 44556655554
No 234
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=24.40 E-value=9.7e+02 Score=26.30 Aligned_cols=165 Identities=16% Similarity=0.237 Sum_probs=87.2
Q ss_pred CCHHHHHHHHHHHHHHHhc-ccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeeccCCCCcc--HHHHHHHHHHCCCEEE
Q 002230 604 LNEAAVNHLNETIEKFASE-ALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPG--VKESVAICRSAGITVR 680 (950)
Q Consensus 604 l~~~~~~~~~~~~~~~a~~-glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~--~~~~I~~l~~aGi~v~ 680 (950)
+.++.++++.+.++.+..+ |.+. .+ +++-..|.+-.. ++..++.|++.|+++.
T Consensus 9 iA~~i~~~l~~~v~~l~~~~g~~P-~L-----------------------aii~vg~d~as~~Yv~~k~k~~~~~Gi~~~ 64 (286)
T PRK14184 9 TAATIREELKTEVAALTARHGRAP-GL-----------------------AVILVGEDPASQVYVRNKERACEDAGIVSE 64 (286)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCC-EE-----------------------EEEEeCCChhHHHHHHHHHHHHHHcCCEEE
Confidence 3455667777777777665 5432 22 333333433322 3667889999999877
Q ss_pred EEc--CC-CHHHHHHHHHHcCCccC-CceeeeCcccccC------------------CHHHHhhhhccccEEeecChhhH
Q 002230 681 MVT--GD-NINTAKAIARECGILTD-NGIAIEGPEFREK------------------SDEELSKLIPKIQVMARSSPMDK 738 (950)
Q Consensus 681 m~T--GD-~~~ta~~ia~~~gi~~~-~~~vi~g~~~~~~------------------~~~~~~~~~~~~~v~ar~~P~~K 738 (950)
..- .| ......+.-++++=+.. +++.+.-+--..+ .+..+..+...-.-|.-|||.-=
T Consensus 65 ~~~l~~~~~~~~l~~~I~~lN~d~~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~av 144 (286)
T PRK14184 65 AFRLPADTTQEELEDLIAELNARPDIDGILLQLPLPKGLDSQRCLELIDPAKDVDGFHPENMGRLALGLPGFRPCTPAGV 144 (286)
T ss_pred EEECCCCCCHHHHHHHHHHHhCCCcCceEEEecCCCCCCCHHHHHhccCcccCcccCCHhhHHHHhCCCCCCCCCCHHHH
Confidence 653 33 23334444455543222 2233322211122 22333333322223556777766
Q ss_pred HHHHHHHhhh-CCCEEEEEcCCccC----HHhhhc------CCcceeecCCCcHH--HHhcCCEEecc
Q 002230 739 HTLVKHLRTT-LGEVVAVTGDGTND----APALHE------ADIGLAMGIAGTEV--AKESADVIILD 793 (950)
Q Consensus 739 ~~~V~~l~~~-~g~~v~~vGDG~ND----~~al~~------AdvGiamg~~g~~~--ak~~aDivl~~ 793 (950)
.++++...-. .|+.|.++|-+..= +-+|.. |.|-++.. ...+. .-..||+++.-
T Consensus 145 ~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs-~t~~l~~~~~~ADIVI~A 211 (286)
T PRK14184 145 MTLLERYGLSPAGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHS-RTPDLAEECREADFLFVA 211 (286)
T ss_pred HHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeC-CchhHHHHHHhCCEEEEe
Confidence 6666655421 37899999988652 335544 55555543 32222 45678999864
No 235
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=24.38 E-value=1.6e+02 Score=25.37 Aligned_cols=47 Identities=19% Similarity=0.191 Sum_probs=38.1
Q ss_pred eeeccCCCCccHHHHHHHHHHCCCEEEE-EcCCCHHHHHHHHHHcCCc
Q 002230 654 IVGIKDPMRPGVKESVAICRSAGITVRM-VTGDNINTAKAIARECGIL 700 (950)
Q Consensus 654 ~~~i~D~lr~~~~~~I~~l~~aGi~v~m-~TGD~~~ta~~ia~~~gi~ 700 (950)
++.+.+..++.+.+..+.|++.|+++.+ ..+.+...-..-|...|+.
T Consensus 6 ii~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~~ 53 (91)
T cd00860 6 VIPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKIP 53 (91)
T ss_pred EEeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCCC
Confidence 3445667788889999999999999988 5777777778888888875
No 236
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=23.75 E-value=1e+03 Score=26.29 Aligned_cols=122 Identities=14% Similarity=0.135 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCh--hHHHHHHHHHHHHHHHHHHhccCCCCccccccCCCCCCCCCcCHH-
Q 002230 812 NIQKFVQFQLTVNVVALIVNFSSACLTGNAPL--TAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNV- 888 (950)
Q Consensus 812 ~i~k~i~~~l~~N~~~~~~~~~~~~~~~~~pl--~~~qll~~nli~d~l~~lal~~e~p~~~l~~~~P~~~~~~li~~~- 888 (950)
+-++.+.+.+.-|....++-+++.++++..-| +++.++ -+.+--.+..+|+.. -+|||..+ ..+=.++
T Consensus 19 ~~~r~l~~~~~L~~~f~~iE~i~g~~s~SlaLLADa~Hml-~D~~al~lal~A~~~-------a~r~~~~~-~TfGy~R~ 89 (296)
T COG1230 19 RNERRLLIALLLNLAFMLIEIIGGLLTGSLALLADALHML-SDALALLLALIAIKL-------ARRPATKR-FTFGYKRL 89 (296)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHhHHHHH-HHHHHHHHHHHHHHH-------hcCCCCCC-CCccHhHH
Confidence 35666778888888888888888888876433 233332 222211222222221 12222211 1111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccccCCCCcccccchHHhHHHHHHHHHHHHhcc
Q 002230 889 MWRNILGQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVCLSTCIR 946 (950)
Q Consensus 889 ~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~t~~F~~~v~~q~~n~~~~r 946 (950)
-...-+..++..+++.+++.+.....|. . +..+..+.++..=++.-+.|.+++.
T Consensus 90 eiLaa~~nav~Li~~s~~I~~EAi~R~~--~--P~~i~~~~ml~va~~GL~vN~~~a~ 143 (296)
T COG1230 90 EILAAFLNALLLIVVSLLILWEAIQRLL--A--PPPIHYSGMLVVAIIGLVVNLVSAL 143 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc--C--CCCCCccchHHHHHHHHHHHHHHHH
Confidence 1222334555566666666654433333 1 2234445556666666777776654
No 237
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=23.62 E-value=9.6e+02 Score=26.27 Aligned_cols=164 Identities=17% Similarity=0.213 Sum_probs=85.3
Q ss_pred CCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeeccCCCCcc--HHHHHHHHHHCCCEEEE
Q 002230 604 LNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPG--VKESVAICRSAGITVRM 681 (950)
Q Consensus 604 l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~--~~~~I~~l~~aGi~v~m 681 (950)
+.++.++++.+.++.+..+|.+. . ++++-..|.+-.. ++..++.|++.|+++..
T Consensus 9 iA~~i~~~ik~~v~~l~~~g~~P-~-----------------------LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~ 64 (282)
T PRK14182 9 IAAKVKGEVATEVRALAARGVQT-G-----------------------LTVVRVGDDPASAIYVRGKRKDCEEVGITSVE 64 (282)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCC-e-----------------------EEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEE
Confidence 34566777888888887777543 2 2334444443332 36678999999998766
Q ss_pred Ec--CC-CHHHHHHHHHHcCCccC-CceeeeCcccccCCHH------------------HHhhhhccccE-EeecChhhH
Q 002230 682 VT--GD-NINTAKAIARECGILTD-NGIAIEGPEFREKSDE------------------ELSKLIPKIQV-MARSSPMDK 738 (950)
Q Consensus 682 ~T--GD-~~~ta~~ia~~~gi~~~-~~~vi~g~~~~~~~~~------------------~~~~~~~~~~v-~ar~~P~~K 738 (950)
+- .+ ......+.-++++-+.. +++.+.-+--..+++. .+.+++..-.- +.-|||.-=
T Consensus 65 ~~l~~~~t~~~l~~~I~~lN~d~~V~GIivqlPLp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~~~~~PcTp~av 144 (282)
T PRK14182 65 HHLPATTTQAELLALIARLNADPAVHGILVQLPLPKHVDERAVLDAISPAKDADGFHPFNVGALSIGIAGVPRPCTPAGV 144 (282)
T ss_pred EECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcCCCCHhHHHHHhCCCCCCCCCCCHHHH
Confidence 53 33 23334444455543322 2333322222222322 23233211111 445666665
Q ss_pred HHHHHHHhhh-CCCEEEEEcCCccC----HHhhhc--CCcceeecCCCcH-H--HHhcCCEEecc
Q 002230 739 HTLVKHLRTT-LGEVVAVTGDGTND----APALHE--ADIGLAMGIAGTE-V--AKESADVIILD 793 (950)
Q Consensus 739 ~~~V~~l~~~-~g~~v~~vGDG~ND----~~al~~--AdvGiamg~~g~~-~--ak~~aDivl~~ 793 (950)
.++++..+-. .|+.|+++|.+..= +-||.. |-|-++- +.|. . .-..||+++.-
T Consensus 145 i~ll~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~AtVtich--s~T~nl~~~~~~ADIvI~A 207 (282)
T PRK14182 145 MRMLDEARVDPKGKRALVVGRSNIVGKPMAMMLLERHATVTIAH--SRTADLAGEVGRADILVAA 207 (282)
T ss_pred HHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeC--CCCCCHHHHHhhCCEEEEe
Confidence 5555554311 37899999988652 335544 4444443 2232 2 33568998864
No 238
>PF04551 GcpE: GcpE protein; InterPro: IPR004588 This protein previously of unknown biochemical function is essential in Escherichia coli. It has now been characterised as 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase, which converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4CPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate in the sixth step of nonmevalonate terpenoid biosynthesis. The family is largely restricted to bacteria, where it is widely but not universally distributed. No homology can be detected between this family and other proteins.; GO: 0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity, 0016114 terpenoid biosynthetic process, 0055114 oxidation-reduction process; PDB: 2Y0F_C 3NOY_A.
Probab=23.56 E-value=3.5e+02 Score=30.47 Aligned_cols=145 Identities=21% Similarity=0.262 Sum_probs=77.9
Q ss_pred HHHHHHHHHHhcccceeEEEEEEcCCCCCCC-----CCCCCCceEEEeeeeccCCCCccH---HHHHHHHHHCCCE--EE
Q 002230 611 HLNETIEKFASEALRTLCLACMEIGNEFSAD-----APIPTEGYTCIGIVGIKDPMRPGV---KESVAICRSAGIT--VR 680 (950)
Q Consensus 611 ~~~~~~~~~a~~glR~l~~A~~~~~~~~~~~-----~~~~e~~l~~lG~~~i~D~lr~~~---~~~I~~l~~aGi~--v~ 680 (950)
...+.++-+.+.|+.-+.++.|.-+-....+ .+.....+ -+|++--- +...++ .-.+-.|-..||- ++
T Consensus 161 sA~~~~~~le~~~f~~iviSlKsSdv~~~i~ayr~la~~~dyPL-HLGvTEAG-~~~~g~IkSsigiG~LL~~GIGDTIR 238 (359)
T PF04551_consen 161 SALEHVRILEELGFDDIVISLKSSDVPETIEAYRLLAERMDYPL-HLGVTEAG-TGEDGTIKSSIGIGALLLDGIGDTIR 238 (359)
T ss_dssp HHHHHHHHHHHCT-GGEEEEEEBSSHHHHHHHHHHHHHH--S-E-EEEBSSEE-SCHHHHHHHHHHHHHHHHTT--SEEE
T ss_pred HHHHHHHHHHHCCCCcEEEEEEeCChHHHHHHHHHHHHhcCCCe-EEeecCCC-CcccchhHHHHHHHHHHHcCCCCEEE
Confidence 3445556666777777777766432110000 00000111 23544322 333443 3346677777873 33
Q ss_pred -EEcCCC---HHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHHHHHhhhC-----CC
Q 002230 681 -MVTGDN---INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTL-----GE 751 (950)
Q Consensus 681 -m~TGD~---~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~~l~~~~-----g~ 751 (950)
-+|+|+ ...+..|-+.+|+-.....+++-+ -|+|. --|-..+++.++++. +-
T Consensus 239 VSLt~~p~~EV~va~~IL~al~lR~~g~~~ISCP------------------tCGRt-~~Dl~~~~~~ie~~l~~l~~~l 299 (359)
T PF04551_consen 239 VSLTGDPVEEVKVAFEILQALGLRKRGPEIISCP------------------TCGRT-EFDLQELVAEIEERLKHLKKGL 299 (359)
T ss_dssp E-ECSSCCCHHHHHHHHHHHTTSS-SS-EEEE----------------------TT---SHHHHHHHHHHHHCCCHHCG-
T ss_pred EECCCCchHHHHHHHHHHHHhCcCcCCceeeeCC------------------CCCCc-cchHHHHHHHHHHHHhcCCCCc
Confidence 358887 457788889999865433333222 23443 456666777766653 35
Q ss_pred EEEEEcCCccCHHhhhcCCcceeec
Q 002230 752 VVAVTGDGTNDAPALHEADIGLAMG 776 (950)
Q Consensus 752 ~v~~vGDG~ND~~al~~AdvGiamg 776 (950)
.|++.|==+|-..-.+.||+|++.|
T Consensus 300 kIAVMGCiVNGPGEa~~AD~GiaGg 324 (359)
T PF04551_consen 300 KIAVMGCIVNGPGEAKDADIGIAGG 324 (359)
T ss_dssp EEEEESSTCCCHHHCTTSSEEEE-E
T ss_pred eEEEEeeeecCCchhhhCceeeecC
Confidence 8999999999999999999999944
No 239
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=23.44 E-value=1e+03 Score=26.13 Aligned_cols=166 Identities=19% Similarity=0.228 Sum_probs=87.2
Q ss_pred CCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeeccCCCCcc--HHHHHHHHHHCCCEEEE
Q 002230 604 LNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPG--VKESVAICRSAGITVRM 681 (950)
Q Consensus 604 l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~--~~~~I~~l~~aGi~v~m 681 (950)
+.++.++++.+.++.+..+|.+. .+ +++-..|.+-.. ++...+.|++.|+.+..
T Consensus 9 ~a~~i~~~l~~~v~~l~~~g~~P-~L-----------------------aii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~ 64 (282)
T PRK14166 9 LSAKIKEELKEKNQFLKSKGIES-CL-----------------------AVILVGDNPASQTYVKSKAKACEECGIKSLV 64 (282)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCc-eE-----------------------EEEEeCCCHHHHHHHHHHHHHHHHcCCEEEE
Confidence 44566777888888887777543 22 233333333332 36678889999998766
Q ss_pred EcCCC---HHHHHHHHHHcCCccC-CceeeeCcccccCCHH------------------HHhhhhcc-ccEEeecChhhH
Q 002230 682 VTGDN---INTAKAIARECGILTD-NGIAIEGPEFREKSDE------------------ELSKLIPK-IQVMARSSPMDK 738 (950)
Q Consensus 682 ~TGD~---~~ta~~ia~~~gi~~~-~~~vi~g~~~~~~~~~------------------~~~~~~~~-~~v~ar~~P~~K 738 (950)
.-=+. .+...+.-++++=+.. +++.+.-+--..++++ .+..++.. -.-|.-|||.-=
T Consensus 65 ~~l~~~~t~~~l~~~I~~lN~D~~V~GIivq~PLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~g~~~~~~PcTp~av 144 (282)
T PRK14166 65 YHLNENTTQNELLALINTLNHDDSVHGILVQLPLPDHICKDLILESIISSKDVDGFHPINVGYLNLGLESGFLPCTPLGV 144 (282)
T ss_pred EECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCChhhhHHHhcCCCCCCcCCCHHHH
Confidence 64332 3334444444443222 2333322221222222 22222212 123456677666
Q ss_pred HHHHHHHhh-hCCCEEEEEcCCccC----HHhhhcCCcceeecCCCcH---HHHhcCCEEecc
Q 002230 739 HTLVKHLRT-TLGEVVAVTGDGTND----APALHEADIGLAMGIAGTE---VAKESADVIILD 793 (950)
Q Consensus 739 ~~~V~~l~~-~~g~~v~~vGDG~ND----~~al~~AdvGiamg~~g~~---~ak~~aDivl~~ 793 (950)
.++++...- -.|+.|+++|-+..= +.+|...|.-+.+-.+-|. ..-..||+++.-
T Consensus 145 i~lL~~y~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~nl~~~~~~ADIvIsA 207 (282)
T PRK14166 145 MKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLYTRQADLIIVA 207 (282)
T ss_pred HHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 666665432 137899999988652 3455555554443323332 234668999863
No 240
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=23.26 E-value=9.7e+02 Score=26.27 Aligned_cols=165 Identities=15% Similarity=0.199 Sum_probs=84.7
Q ss_pred CCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeeccCCCCc--cHHHHHHHHHHCCCEEEE
Q 002230 604 LNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRP--GVKESVAICRSAGITVRM 681 (950)
Q Consensus 604 l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~--~~~~~I~~l~~aGi~v~m 681 (950)
+.++.++++.+.++.+..+|.+. . ++++-..|.+-. -++...+.|++.|+++..
T Consensus 11 vA~~i~~~l~~~v~~l~~~g~~P-~-----------------------Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~ 66 (284)
T PRK14190 11 VAKEKREQLKEEVVKLKEQGIVP-G-----------------------LAVILVGDDPASHSYVRGKKKAAEKVGIYSEL 66 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCC-e-----------------------EEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEE
Confidence 34556677777777777666543 2 222333333322 235678899999998766
Q ss_pred E--cCCC-HHHHHHHHHHcCCccC-CceeeeCcccccC------------------CHHHHhhhhccccEEeecChhhHH
Q 002230 682 V--TGDN-INTAKAIARECGILTD-NGIAIEGPEFREK------------------SDEELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 682 ~--TGD~-~~ta~~ia~~~gi~~~-~~~vi~g~~~~~~------------------~~~~~~~~~~~~~v~ar~~P~~K~ 739 (950)
. ..+- .....+.-++++=+.+ +++.+.-+--..+ ++..+.++...-..|.-|||.-=.
T Consensus 67 ~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~PLp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~PcTp~av~ 146 (284)
T PRK14190 67 YEFPADITEEELLALIDRLNADPRINGILVQLPLPKHIDEKAVIERISPEKDVDGFHPINVGRMMLGQDTFLPCTPHGIL 146 (284)
T ss_pred EECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCccccccccCHhhHHHHhcCCCCCCCCCHHHHH
Confidence 4 3332 2233344444443322 2233322211222 223333333222345667787766
Q ss_pred HHHHHHhhh-CCCEEEEEcCCccC----HHhhhc--CCcceeecCCCcH--HHHhcCCEEecc
Q 002230 740 TLVKHLRTT-LGEVVAVTGDGTND----APALHE--ADIGLAMGIAGTE--VAKESADVIILD 793 (950)
Q Consensus 740 ~~V~~l~~~-~g~~v~~vGDG~ND----~~al~~--AdvGiamg~~g~~--~ak~~aDivl~~ 793 (950)
++++..+-. .|+.|.++|-+..= +-+|.. |-|-++-. ...+ ..-..||+++.-
T Consensus 147 ~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs-~t~~l~~~~~~ADIvI~A 208 (284)
T PRK14190 147 ELLKEYNIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHS-KTKNLAELTKQADILIVA 208 (284)
T ss_pred HHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeC-CchhHHHHHHhCCEEEEe
Confidence 666665421 37899999988552 334443 44444432 2122 244678988853
No 241
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=23.25 E-value=1e+03 Score=26.10 Aligned_cols=166 Identities=16% Similarity=0.214 Sum_probs=85.4
Q ss_pred CCHHHHHHHHHHHHHHHhcccceeEEEEEEcCCCCCCCCCCCCCceEEEeeeeccCCCCc--cHHHHHHHHHHCCCEEEE
Q 002230 604 LNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRP--GVKESVAICRSAGITVRM 681 (950)
Q Consensus 604 l~~~~~~~~~~~~~~~a~~glR~l~~A~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~--~~~~~I~~l~~aGi~v~m 681 (950)
+.++.++++.+.++.+..+|.+. .+| ++-..|..-. -++...+.|++.|+.+.+
T Consensus 9 va~~i~~~l~~~v~~l~~~g~~P-~La-----------------------ii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~ 64 (282)
T PRK14169 9 VSKKILADLKQTVAKLAQQDVTP-TLA-----------------------VVLVGSDPASEVYVRNKQRRAEDIGVRSLM 64 (282)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCC-eEE-----------------------EEEeCCChhHHHHHHHHHHHHHHcCCEEEE
Confidence 34566677777888877666543 222 3333333322 246678889999998766
Q ss_pred EcCCC---HHHHHHHHHHcCCccC-CceeeeCcccccCCHH------------------HHhhhhccccEEeecChhhHH
Q 002230 682 VTGDN---INTAKAIARECGILTD-NGIAIEGPEFREKSDE------------------ELSKLIPKIQVMARSSPMDKH 739 (950)
Q Consensus 682 ~TGD~---~~ta~~ia~~~gi~~~-~~~vi~g~~~~~~~~~------------------~~~~~~~~~~v~ar~~P~~K~ 739 (950)
..=+. .+...+.-++++=+.. +++.+.-+--..+++. .+..++..-.-|.-|||.-=.
T Consensus 65 ~~l~~~~~~~el~~~I~~lN~D~~V~GIlvqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~avi 144 (282)
T PRK14169 65 FRLPEATTQADLLAKVAELNHDPDVDAILVQLPLPAGLDEQAVIDAIDPDKDVDGFSPVSVGRLWANEPTVVASTPYGIM 144 (282)
T ss_pred EECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhhcCcccCcccCChhhhHHHhcCCCCCCCCCHHHHH
Confidence 53322 2233344444433221 2333322222222222 222232222235567777666
Q ss_pred HHHHHHhhh-CCCEEEEEcCCccC----HHhhhcCCcceeecCCCc-HH--HHhcCCEEecc
Q 002230 740 TLVKHLRTT-LGEVVAVTGDGTND----APALHEADIGLAMGIAGT-EV--AKESADVIILD 793 (950)
Q Consensus 740 ~~V~~l~~~-~g~~v~~vGDG~ND----~~al~~AdvGiamg~~g~-~~--ak~~aDivl~~ 793 (950)
++++...-. .|+.|.++|-+..= +-||...+.-+.+-.+-| +. .-..||+++.-
T Consensus 145 ~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~A 206 (282)
T PRK14169 145 ALLDAYDIDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNLKQLTKEADILVVA 206 (282)
T ss_pred HHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEc
Confidence 666655421 37899999988652 335554444443332223 22 34668998863
No 242
>PRK03557 zinc transporter ZitB; Provisional
Probab=23.10 E-value=1e+03 Score=26.33 Aligned_cols=49 Identities=14% Similarity=0.189 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCC-ChhHHHHHHHHHHHHHHHHHH
Q 002230 814 QKFVQFQLTVNVVALIVNFSSACLTGNA-PLTAVQLLWVNMIMDTLGALA 862 (950)
Q Consensus 814 ~k~i~~~l~~N~~~~~~~~~~~~~~~~~-pl~~~qll~~nli~d~l~~la 862 (950)
++.+.+.+..|++..++-++..++++.. .+....-.+.+++...+..++
T Consensus 18 ~r~~~~~~~~n~~l~i~k~~~g~~tgS~AllaDa~hsl~D~~~~~~~l~a 67 (312)
T PRK03557 18 ARRLLYAFGVTAGFMLVEVIGGFLSGSLALLADAGHMLTDAAALLFALLA 67 (312)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456677888888887777777776643 233333333444444433333
No 243
>PF13275 S4_2: S4 domain; PDB: 1P9K_A.
Probab=22.48 E-value=51 Score=27.39 Aligned_cols=23 Identities=35% Similarity=0.403 Sum_probs=12.8
Q ss_pred EEeCCeEEEEecCCcCCCcEEEe
Q 002230 242 VARNGFRRKISIYDLLPGDIVHL 264 (950)
Q Consensus 242 V~R~g~~~~I~~~dLvvGDiV~l 264 (950)
|..||+...-.-..|.+||+|.+
T Consensus 35 V~VNGe~e~rrg~Kl~~GD~V~~ 57 (65)
T PF13275_consen 35 VKVNGEVETRRGKKLRPGDVVEI 57 (65)
T ss_dssp HEETTB----SS----SSEEEEE
T ss_pred eEECCEEccccCCcCCCCCEEEE
Confidence 45589888888899999999998
No 244
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=22.39 E-value=3.2e+02 Score=30.08 Aligned_cols=84 Identities=21% Similarity=0.332 Sum_probs=50.9
Q ss_pred cHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhhccccEEeecChhhHHHHHH
Q 002230 664 GVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVK 743 (950)
Q Consensus 664 ~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~~P~~K~~~V~ 743 (950)
|+...+.++ +..+|+-|....+...+|+..+++ |++|-. -..-|-|-+.=+.
T Consensus 91 DTArVLsr~----~D~I~~R~~~~~~ve~lA~~s~VP-----ViNgLt-------------------D~~HP~Q~LADl~ 142 (310)
T COG0078 91 DTARVLSRM----VDAIMIRGFSHETLEELAKYSGVP-----VINGLT-------------------DEFHPCQALADLM 142 (310)
T ss_pred HHHHHHHhh----hheEEEecccHHHHHHHHHhCCCc-----eEcccc-------------------cccCcHHHHHHHH
Confidence 344444443 677999999999999999999985 344421 1123544443333
Q ss_pred HHhhhC----CCEEEEEcCCccCHH--hhhcCCcceee
Q 002230 744 HLRTTL----GEVVAVTGDGTNDAP--ALHEADIGLAM 775 (950)
Q Consensus 744 ~l~~~~----g~~v~~vGDG~ND~~--al~~AdvGiam 775 (950)
.++++. |.+++++|||.|=+. ++..|=.|+-+
T Consensus 143 Ti~E~~g~l~g~k~a~vGDgNNv~nSl~~~~a~~G~dv 180 (310)
T COG0078 143 TIKEHFGSLKGLKLAYVGDGNNVANSLLLAAAKLGMDV 180 (310)
T ss_pred HHHHhcCcccCcEEEEEcCcchHHHHHHHHHHHhCCeE
Confidence 444432 579999999955433 34444444433
No 245
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=22.11 E-value=2.6e+02 Score=36.73 Aligned_cols=41 Identities=17% Similarity=0.205 Sum_probs=31.4
Q ss_pred CCeEEEEecCCcCCCcEEEeCCCCeecccEEEEeecceEEEc
Q 002230 245 NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINE 286 (950)
Q Consensus 245 ~g~~~~I~~~dLvvGDiV~l~~Gd~vPaDgill~g~~l~VDe 286 (950)
-|....+...|.+|-|...++. ..+=+|=-.|.|++.-|+-
T Consensus 138 pGDIv~L~~Gd~VPAD~rLi~~-~~L~VDES~LTGES~pV~K 178 (1053)
T TIGR01523 138 PGDICLLKTGDTIPADLRLIET-KNFDTDEALLTGESLPVIK 178 (1053)
T ss_pred CCCEEEECCCCEeeccEEEEEe-CceEEEchhhcCCCCceec
Confidence 5888999999999999999984 4566677777777754543
No 246
>COG0272 Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair]
Probab=21.69 E-value=1.4e+02 Score=36.37 Aligned_cols=75 Identities=19% Similarity=0.279 Sum_probs=46.1
Q ss_pred EecCCcCCCcEEEe-CCCCeecc-cEEEEeecceEEEcccccCCCCcccccCCCCeEEeccEEeeceEEEEEEEEeeccc
Q 002230 251 ISIYDLLPGDIVHL-CMGDQVPA-DGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQ 328 (950)
Q Consensus 251 I~~~dLvvGDiV~l-~~Gd~vPa-Dgill~g~~l~VDeS~LTGEs~pv~k~~~~~~l~sGt~v~~G~~~~~V~~~G~~T~ 328 (950)
|.-.||.+||-|.| ++||+||- ++++.+. =+|+..|..-.... =..||.+......+..-+++..+-
T Consensus 363 I~rkdIrIGDtV~V~kAGdVIP~V~~Vv~e~---------R~~~~~~~~~P~~C--P~C~s~l~r~~~e~~~rC~n~~~C 431 (667)
T COG0272 363 IKRKDIRIGDTVVVRKAGDVIPQVVGVVLEK---------RPGNEKPIPFPTHC--PVCGSELVREEGEVVIRCTNGLNC 431 (667)
T ss_pred HHhcCCCCCCEEEEEecCCCCcceeeeeccc---------CCCCCCCCCCCCCC--CCCCCeeEeccCceeEecCCCCCC
Confidence 33489999999999 57999995 3333333 34665554422222 356888887666666667774444
Q ss_pred hhhHhhhh
Q 002230 329 WGKLMATL 336 (950)
Q Consensus 329 ~g~i~~~~ 336 (950)
-++..+.+
T Consensus 432 ~aq~~e~l 439 (667)
T COG0272 432 PAQLKERL 439 (667)
T ss_pred hHHHhhhe
Confidence 44444433
No 247
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=21.18 E-value=1.1e+02 Score=31.13 Aligned_cols=40 Identities=20% Similarity=0.313 Sum_probs=28.8
Q ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCCH--------HHHHHHHHHcCC
Q 002230 660 PMRPGVKESVAICRSAGITVRMVTGDNI--------NTAKAIARECGI 699 (950)
Q Consensus 660 ~lr~~~~~~I~~l~~aGi~v~m~TGD~~--------~ta~~ia~~~gi 699 (950)
++-||+.+++++|.+.|..++++|+... .|..-+.+.+|-
T Consensus 73 ~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~ 120 (191)
T PF06941_consen 73 PPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPF 120 (191)
T ss_dssp -B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTH
T ss_pred CccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCC
Confidence 4568999999999999999888888764 344556666553
No 248
>COG1916 Uncharacterized homolog of PrgY (pheromone shutdown protein) [Function unknown]
Probab=20.68 E-value=5.3e+02 Score=29.14 Aligned_cols=40 Identities=15% Similarity=0.125 Sum_probs=33.5
Q ss_pred CCccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 002230 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (950)
Q Consensus 661 lr~~~~~~I~~l~~aGi~v~m~TGD~~~ta~~ia~~~gi~ 700 (950)
|=.+.+.||+..++.|+.|.++--|-.-|-++.-.++++.
T Consensus 97 PGsEmk~AIe~A~e~ga~V~lIDRdI~vTl~R~~~~~~~~ 136 (388)
T COG1916 97 PGSEMKAAIEAARELGAPVALIDRDIGVTLRRAWAKMPFW 136 (388)
T ss_pred ChHHHHHHHHHHHHcCCCEEEecccHHHHHHHHHHhCCHH
Confidence 4456799999999999999999999888888777766653
No 249
>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional
Probab=20.63 E-value=4.5e+02 Score=29.32 Aligned_cols=50 Identities=16% Similarity=0.225 Sum_probs=40.4
Q ss_pred CceEEEeeeeccCCCCccHHHHHHHHHHC---CCEEEEEcCCCHHHHHHHHHH
Q 002230 647 EGYTCIGIVGIKDPMRPGVKESVAICRSA---GITVRMVTGDNINTAKAIARE 696 (950)
Q Consensus 647 ~~l~~lG~~~i~D~lr~~~~~~I~~l~~a---Gi~v~m~TGD~~~ta~~ia~~ 696 (950)
.++.=+=+++=..-+-|+..++++.++.. |..|...+-|++.+|++++.-
T Consensus 165 ~~~iKlEvi~e~~~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d~~~a~~l~~~ 217 (326)
T PRK11840 165 WDLVKLEVLGDAKTLYPDMVETLKATEILVKEGFQVMVYCSDDPIAAKRLEDA 217 (326)
T ss_pred CCeEEEEEcCCCCCcccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhc
Confidence 34454555555667788999999999999 999988889999999988875
Done!