BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002235
(949 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SV21|COPB1_ARATH Coatomer subunit beta-1 OS=Arabidopsis thaliana GN=At4g31480 PE=1
SV=2
Length = 948
Score = 1696 bits (4393), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 813/949 (85%), Positives = 892/949 (93%), Gaps = 1/949 (0%)
Query: 1 MEKSCTLLIHFDKGTPAIANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVR 60
M+KS T+L+H+DKGTPA+ANEIKEALEGNDV AKVDAMKKAIMLLLNGET+PQLFITI+R
Sbjct: 1 MDKSSTMLVHYDKGTPAVANEIKEALEGNDVEAKVDAMKKAIMLLLNGETIPQLFITIIR 60
Query: 61 YVLPSEDHTIQKLLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFL 120
YVLPSEDHTIQKLLLLYLE+I+KTD+KG+VLPEMILICQNLRNNLQHPNEYIRGVTLRFL
Sbjct: 61 YVLPSEDHTIQKLLLLYLELIEKTDSKGKVLPEMILICQNLRNNLQHPNEYIRGVTLRFL 120
Query: 121 CRLNETEIIEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLS 180
CR+ ETEI+EPL PSVLQNL+HRHP++RRNAILA+M+IYKLPQG+QL VDAPEMIEKVLS
Sbjct: 121 CRMKETEIVEPLTPSVLQNLEHRHPFVRRNAILAIMSIYKLPQGDQLFVDAPEMIEKVLS 180
Query: 181 TEQDPSAKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNKGEK 240
TEQDPSAKRNAFLMLFTC ++RA+NYLL++VD+VS+W E LQMVVLELIR VC+T EK
Sbjct: 181 TEQDPSAKRNAFLMLFTCAEERAVNYLLSNVDKVSDWNESLQMVVLELIRSVCKTKPAEK 240
Query: 241 GKYIKIIISLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVL 300
GKYIKIIISLL+A S+AVIYECAGTLVSLSSAPTAIRAAANTY QLLLSQSDNNVKLI+L
Sbjct: 241 GKYIKIIISLLSATSSAVIYECAGTLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLILL 300
Query: 301 DRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINEVVLMLKKEV 360
DRL EL++ HRDIMV+LI+DVLRAL+SPNLDIRRKTLDI L+LIT NINEVV MLKKEV
Sbjct: 301 DRLYELKTLHRDIMVELIIDVLRALSSPNLDIRRKTLDISLDLITHHNINEVVQMLKKEV 360
Query: 361 VKTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVR 420
VKTQSGELEKNGEYRQMLIQAIH+CA+KFPEVASTVVHLLMDFLGDSNVASA+DV++FVR
Sbjct: 361 VKTQSGELEKNGEYRQMLIQAIHACAVKFPEVASTVVHLLMDFLGDSNVASALDVVVFVR 420
Query: 421 EIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCLGE 480
EIIE NPKLRVSIITRLLD FYQIRA +VC CALWIIGEYC SLSEVE+GI+TI QCLGE
Sbjct: 421 EIIETNPKLRVSIITRLLDTFYQIRAGKVCPCALWIIGEYCLSLSEVESGISTITQCLGE 480
Query: 481 LPFFSVSEEGEDTDSSKKVQQQASSTTVSSRRPAVLADGTYATQSAASETAFSPPTIVQG 540
LPF+SVSEE E T++SKK+ Q SS VSSR+P +LADGTYATQSAASET FS PT+VQG
Sbjct: 481 LPFYSVSEESEPTETSKKI-QPTSSAMVSSRKPVILADGTYATQSAASETTFSSPTVVQG 539
Query: 541 TLTSGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEVNKASSQALLIMVSMLQL 600
+LTSGNLR+LLLTGDFFLGAVVACTLTKLVLRLEEVQ S+ EVNK +QALLIMVSMLQL
Sbjct: 540 SLTSGNLRALLLTGDFFLGAVVACTLTKLVLRLEEVQSSKTEVNKTVTQALLIMVSMLQL 599
Query: 601 GQSPVLPHPIDNDSFDRIVVCIRLLCNTGDNIRKIWLQSCRQSFVKMLSEKQLRESEELK 660
GQSPV PHPIDNDS++RIV+CI+LLC+ D ++KIWL+SCRQSFVKM+SEKQLRE EELK
Sbjct: 600 GQSPVSPHPIDNDSYERIVLCIKLLCHRNDEMKKIWLESCRQSFVKMISEKQLREMEELK 659
Query: 661 AKAQISHAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGEFVKEGDDANKLNRILQ 720
AK Q +HAQPDDLIDF+HLKSRKGMSQLELED+VQDDLKRATGEF K+ +DANKLNRILQ
Sbjct: 660 AKTQTTHAQPDDLIDFFHLKSRKGMSQLELEDQVQDDLKRATGEFTKDENDANKLNRILQ 719
Query: 721 LTGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVERPQNYTLA 780
LTGFSDPVYAEAYVTVHHYDI L+VTVINRTKETLQNLCLELATMGDLKLVERPQNY+LA
Sbjct: 720 LTGFSDPVYAEAYVTVHHYDIALEVTVINRTKETLQNLCLELATMGDLKLVERPQNYSLA 779
Query: 781 PESSKQIKANIKVSSTETGVIFGNIVYETSNVLERTVVVLNDIHIDIMDYISPAVCTDAA 840
PE S QIKANIKVSSTETGVIFGNIVYETSNV+ER VVVLNDIHIDIMDYISPAVC++ A
Sbjct: 780 PERSMQIKANIKVSSTETGVIFGNIVYETSNVMERNVVVLNDIHIDIMDYISPAVCSEVA 839
Query: 841 FRTMWAEFEWENKVAVNTVIQDEKEFLDHIIKSTNMKCLTAPSALDGDCGFLAANLYAKS 900
FRTMWAEFEWENKVAVNT IQ+E+EFLDHIIKSTNMKCLTAPSA++G+CGFLAANLYAKS
Sbjct: 840 FRTMWAEFEWENKVAVNTTIQNEREFLDHIIKSTNMKCLTAPSAIEGECGFLAANLYAKS 899
Query: 901 VFGEDALVNVSIEKQTDGKLSGYIRIRSKTQGIALSLGDKITLKQKGGS 949
VFGEDALVNVSIEKQTDG LSGYIRIRSKTQGIALSLGDKITLKQKG S
Sbjct: 900 VFGEDALVNVSIEKQTDGALSGYIRIRSKTQGIALSLGDKITLKQKGSS 948
>sp|Q9SV20|COPB2_ARATH Coatomer subunit beta-2 OS=Arabidopsis thaliana GN=At4g31490 PE=2
SV=2
Length = 948
Score = 1687 bits (4369), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 810/949 (85%), Positives = 890/949 (93%), Gaps = 1/949 (0%)
Query: 1 MEKSCTLLIHFDKGTPAIANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVR 60
M+KS T+L+H+DKGTPA+ANEIKEALEGNDV AKVDAMKKAIMLLLNGET+PQLFITI+R
Sbjct: 1 MDKSSTMLVHYDKGTPAVANEIKEALEGNDVEAKVDAMKKAIMLLLNGETIPQLFITIIR 60
Query: 61 YVLPSEDHTIQKLLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFL 120
YVLPSEDHTIQKLLLLYLE+I+KTD+KG+VLPEMILICQNLRNNLQHPNEYIRGVTLRFL
Sbjct: 61 YVLPSEDHTIQKLLLLYLELIEKTDSKGKVLPEMILICQNLRNNLQHPNEYIRGVTLRFL 120
Query: 121 CRLNETEIIEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLS 180
CR+ ETEI+EPL PSVLQNL+HRHP++RRNAILA+M+IYKLP G+QL VDAPEMIEKVLS
Sbjct: 121 CRMKETEIVEPLTPSVLQNLEHRHPFVRRNAILAIMSIYKLPHGDQLFVDAPEMIEKVLS 180
Query: 181 TEQDPSAKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNKGEK 240
TEQDPSAKRNAFLMLFTC ++RA+NYLL++VD+VS+W E LQMVVLELIR VC+T EK
Sbjct: 181 TEQDPSAKRNAFLMLFTCAEERAVNYLLSNVDKVSDWNESLQMVVLELIRSVCKTKPAEK 240
Query: 241 GKYIKIIISLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVL 300
GKYIKIIISLL+A S+AVIYECAGTLVSLSSAPTAIRAAANTY QLLLSQSDNNVKLI+L
Sbjct: 241 GKYIKIIISLLSATSSAVIYECAGTLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLILL 300
Query: 301 DRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINEVVLMLKKEV 360
DRL EL++ HRDIMV+LI+DVLRAL+SPNLDIRRKTLDI L+LIT NINEVV MLKKEV
Sbjct: 301 DRLYELKTLHRDIMVELIIDVLRALSSPNLDIRRKTLDIALDLITHHNINEVVQMLKKEV 360
Query: 361 VKTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVR 420
VKTQSGELEKNGEYRQMLIQAIH+CA+KFPEVASTVVHLLMDFLGDSNVASA+DV++FVR
Sbjct: 361 VKTQSGELEKNGEYRQMLIQAIHACAVKFPEVASTVVHLLMDFLGDSNVASALDVVVFVR 420
Query: 421 EIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCLGE 480
EIIE NPKLRVSIITRLLD FYQIRA +VC CALWIIGEYC SLSEVE+GI+TI QCLGE
Sbjct: 421 EIIETNPKLRVSIITRLLDTFYQIRAGKVCPCALWIIGEYCLSLSEVESGISTITQCLGE 480
Query: 481 LPFFSVSEEGEDTDSSKKVQQQASSTTVSSRRPAVLADGTYATQSAASETAFSPPTIVQG 540
LPF+SVSEE E T++SKK+ Q SS VSSR+P +LADGTYATQSAASET FS PT+VQG
Sbjct: 481 LPFYSVSEESEPTETSKKI-QPTSSAMVSSRKPVILADGTYATQSAASETTFSSPTVVQG 539
Query: 541 TLTSGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEVNKASSQALLIMVSMLQL 600
+LTSGNLR+LLLTGDFFLGAVVACTLTKLVLRLEEVQ S+ EVNK SQALLIMVS+LQL
Sbjct: 540 SLTSGNLRALLLTGDFFLGAVVACTLTKLVLRLEEVQSSKTEVNKTVSQALLIMVSILQL 599
Query: 601 GQSPVLPHPIDNDSFDRIVVCIRLLCNTGDNIRKIWLQSCRQSFVKMLSEKQLRESEELK 660
GQSPV PHPIDNDS++RI++CI+LLC+ ++KIWL+SCRQSFVKM+SEKQLRE EELK
Sbjct: 600 GQSPVSPHPIDNDSYERIMLCIKLLCHRNVEMKKIWLESCRQSFVKMISEKQLREMEELK 659
Query: 661 AKAQISHAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGEFVKEGDDANKLNRILQ 720
AK Q +HAQPDDLIDF+HLKSRKGMSQLELED+VQDDLKRATGEF K+ +DANKLNRILQ
Sbjct: 660 AKTQTTHAQPDDLIDFFHLKSRKGMSQLELEDQVQDDLKRATGEFTKDENDANKLNRILQ 719
Query: 721 LTGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVERPQNYTLA 780
LTGFSDPVYAEAYVTVHHYDI L+VTVINRTKETLQNLCLELATMGDLKLVERPQNY+LA
Sbjct: 720 LTGFSDPVYAEAYVTVHHYDIALEVTVINRTKETLQNLCLELATMGDLKLVERPQNYSLA 779
Query: 781 PESSKQIKANIKVSSTETGVIFGNIVYETSNVLERTVVVLNDIHIDIMDYISPAVCTDAA 840
PE S QIKANIKVSSTETGVIFGNIVYETSNV+ER VVVLNDIHIDIMDYISPAVC++ A
Sbjct: 780 PERSMQIKANIKVSSTETGVIFGNIVYETSNVMERNVVVLNDIHIDIMDYISPAVCSEVA 839
Query: 841 FRTMWAEFEWENKVAVNTVIQDEKEFLDHIIKSTNMKCLTAPSALDGDCGFLAANLYAKS 900
FRTMWAEFEWENKVAVNT IQ+E+EFLDHIIKSTNMKCLTAPSA+ G+CGFLAANLYAKS
Sbjct: 840 FRTMWAEFEWENKVAVNTTIQNEREFLDHIIKSTNMKCLTAPSAIAGECGFLAANLYAKS 899
Query: 901 VFGEDALVNVSIEKQTDGKLSGYIRIRSKTQGIALSLGDKITLKQKGGS 949
VFGEDALVN+SIEKQTDG LSGYIRIRSKTQGIALSLGDKITLKQKGGS
Sbjct: 900 VFGEDALVNLSIEKQTDGTLSGYIRIRSKTQGIALSLGDKITLKQKGGS 948
>sp|Q53PC7|COPB1_ORYSJ Coatomer subunit beta-1 OS=Oryza sativa subsp. japonica
GN=Os11g0174000 PE=2 SV=1
Length = 953
Score = 1602 bits (4149), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 768/952 (80%), Positives = 874/952 (91%), Gaps = 3/952 (0%)
Query: 1 MEKSCTLLIHFDKGTPAIANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVR 60
MEK CTLL+HFDKG+P++ANEIK LEG+DV AKVDAMK+AIMLLLNGETLP LFIT+VR
Sbjct: 1 MEKPCTLLVHFDKGSPSMANEIKADLEGSDVAAKVDAMKRAIMLLLNGETLPHLFITVVR 60
Query: 61 YVLPSEDHTIQKLLLLYLEIIDKTD-AKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRF 119
YVLPSEDHTIQKLLLLYLEI+DK D A G+VLPEMILICQNLRNNLQHPNEYIRGVTLRF
Sbjct: 61 YVLPSEDHTIQKLLLLYLEIVDKRDVASGKVLPEMILICQNLRNNLQHPNEYIRGVTLRF 120
Query: 120 LCRLNETEIIEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVL 179
LCRLNE E++EPLIPS+L NL HRH +IRR+A+ A+ AIY+LP G+QLL DAPE++E+ L
Sbjct: 121 LCRLNEPELLEPLIPSILANLDHRHHFIRRHALSAISAIYRLPHGDQLLPDAPEVVERAL 180
Query: 180 STEQDPSAKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRT-NKG 238
+ EQD SA+RN FLML C Q+RA+ YLLT+ +RV+EW +LLQM ++LIRKVCR+ N+
Sbjct: 181 TGEQDASARRNGFLMLCACAQERAVAYLLTNAERVAEWPDLLQMAAVDLIRKVCRSPNRA 240
Query: 239 EKGKYIKIIISLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLI 298
+KG+YIKIIISLL+AP++AV+YE AG LVSLSSAPTA+RAAANTY QLL SQSDNNVKLI
Sbjct: 241 DKGRYIKIIISLLSAPNSAVVYESAGALVSLSSAPTAVRAAANTYCQLLSSQSDNNVKLI 300
Query: 299 VLDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINEVVLMLKK 358
VLDRL+ELR+SHRD+MVD++MDVLRAL+SPN+D+RRK LD+VL+L+TPRN+ EVV+ LKK
Sbjct: 301 VLDRLHELRASHRDVMVDVVMDVLRALSSPNVDVRRKVLDLVLDLLTPRNVEEVVMYLKK 360
Query: 359 EVVKTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIF 418
EVVKTQ+G+LEK GEYRQML+QAIHSCA+++PEVA +VVHLLMDFLGD+NVA+A+DV++F
Sbjct: 361 EVVKTQAGDLEKGGEYRQMLVQAIHSCAVEYPEVAGSVVHLLMDFLGDTNVAAAVDVVLF 420
Query: 419 VREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCL 478
VREIIE NPKLRVS+I RL+D FYQIRA+RVC+CALWI+GEY SLSEVE+ I+TIKQCL
Sbjct: 421 VREIIETNPKLRVSMIQRLIDTFYQIRASRVCSCALWILGEYSLSLSEVESAISTIKQCL 480
Query: 479 GELPFFSVSEEGEDTDSSKKVQQQASSTTVSSRRPAVLADGTYATQSAASETAFSPPTIV 538
G+LPF++VSEEGE TD+SK Q +S TVSSRRP VLADGTYATQSAA+ETA S P +
Sbjct: 481 GDLPFYTVSEEGESTDASKPAQPVVNSVTVSSRRPVVLADGTYATQSAATETAISSPAVA 540
Query: 539 QGTLTSG-NLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEVNKASSQALLIMVSM 597
G+L+S NLRSL+L+GDFFL AVVACTLTKLVLRLEEVQPS+ E NKAS+ ALLIMVS+
Sbjct: 541 PGSLSSTQNLRSLILSGDFFLAAVVACTLTKLVLRLEEVQPSKAEANKASTGALLIMVSI 600
Query: 598 LQLGQSPVLPHPIDNDSFDRIVVCIRLLCNTGDNIRKIWLQSCRQSFVKMLSEKQLRESE 657
LQLGQS LPHPIDNDS+DRIV+C+RLLCNTGD++RK+WLQSCRQSF KML+EKQ RE+E
Sbjct: 601 LQLGQSSYLPHPIDNDSYDRIVLCVRLLCNTGDDVRKVWLQSCRQSFTKMLAEKQFRETE 660
Query: 658 ELKAKAQISHAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGEFVKEGDDANKLNR 717
E+KAKAQISHAQPDDLIDFYHLKSR+GMSQLELED VQDDLK ATGEF K+ DDAN+LNR
Sbjct: 661 EMKAKAQISHAQPDDLIDFYHLKSRRGMSQLELEDAVQDDLKAATGEFTKDADDANRLNR 720
Query: 718 ILQLTGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVERPQNY 777
ILQLTGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLV+RPQNY
Sbjct: 721 ILQLTGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVDRPQNY 780
Query: 778 TLAPESSKQIKANIKVSSTETGVIFGNIVYETSNVLERTVVVLNDIHIDIMDYISPAVCT 837
TLAPESSKQI+ANIKVSSTETGVIFGNIVYETSNV+ER+VVVLNDIHIDIMDYISPA C
Sbjct: 781 TLAPESSKQIRANIKVSSTETGVIFGNIVYETSNVMERSVVVLNDIHIDIMDYISPATCA 840
Query: 838 DAAFRTMWAEFEWENKVAVNTVIQDEKEFLDHIIKSTNMKCLTAPSALDGDCGFLAANLY 897
D AFR MWAEFEWENKVAVNTVIQDEKEFLDHIIKSTNMKCLT PSALDG+CGF+AANLY
Sbjct: 841 DVAFRNMWAEFEWENKVAVNTVIQDEKEFLDHIIKSTNMKCLTPPSALDGECGFIAANLY 900
Query: 898 AKSVFGEDALVNVSIEKQTDGKLSGYIRIRSKTQGIALSLGDKITLKQKGGS 949
AKSVFGEDALVN+S+EKQ DGKLSGYIRIRSKTQGIALSLGDKITLKQKGGS
Sbjct: 901 AKSVFGEDALVNISVEKQADGKLSGYIRIRSKTQGIALSLGDKITLKQKGGS 952
>sp|Q0JNK5|COPB2_ORYSJ Coatomer subunit beta-2 OS=Oryza sativa subsp. japonica
GN=Os01g0281400 PE=3 SV=1
Length = 950
Score = 1578 bits (4087), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 758/951 (79%), Positives = 870/951 (91%), Gaps = 3/951 (0%)
Query: 1 MEKSCTLLIHFDKGTPAIANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVR 60
MEK TLL+HFDKG+ A+A EIK LEG+DV AKVDAMK+A+MLLLNGETLP LFIT+VR
Sbjct: 1 MEKPSTLLVHFDKGSAAMAGEIKADLEGSDVAAKVDAMKRAVMLLLNGETLPTLFITVVR 60
Query: 61 YVLPSEDHTIQKLLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFL 120
YVLPSEDHTIQKLLLLYLEIIDK DA GR LPEMILICQNLRNNL HPNEYIRGVTLRFL
Sbjct: 61 YVLPSEDHTIQKLLLLYLEIIDKRDAAGRGLPEMILICQNLRNNLHHPNEYIRGVTLRFL 120
Query: 121 CRLNETEIIEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLS 180
CRL+E E++EPL+PS+L+NL HRH +IRR+A+ A+ +IY+LP G+QL+ DAPE++E+ L+
Sbjct: 121 CRLSEPEVLEPLVPSILENLDHRHHFIRRHALSAISSIYRLPHGDQLVPDAPELVERALA 180
Query: 181 TEQDPSAKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRT-NKGE 239
+EQD SA+RNAFLML TC Q+RA+ YLL++ DRV+EW +LLQM ++LIRKVCR+ N+ +
Sbjct: 181 SEQDASARRNAFLMLCTCAQERAVAYLLSNADRVAEWPDLLQMAAVDLIRKVCRSPNRAD 240
Query: 240 KGKYIKIIISLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIV 299
KG+YIKIII+LL++PSTAV+YECAG LVSLSSAPTA+RAAANTY +LL SQSDNNVKLIV
Sbjct: 241 KGRYIKIIIALLSSPSTAVVYECAGALVSLSSAPTAVRAAANTYCELLSSQSDNNVKLIV 300
Query: 300 LDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINEVVLMLKKE 359
LDRLNELR+SHRD+MVD++MDVLRAL SPNLD++RK LD+VL+L+T RN+ EVVL LKKE
Sbjct: 301 LDRLNELRTSHRDVMVDVVMDVLRALASPNLDVKRKVLDLVLDLLTARNVEEVVLYLKKE 360
Query: 360 VVKTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFV 419
VVKTQ+GELEK+GEYRQML+QAIH+CA+++PEVA +VVHLLMDFLGD+NVA+A+DV++FV
Sbjct: 361 VVKTQAGELEKSGEYRQMLVQAIHACAVEYPEVAGSVVHLLMDFLGDTNVAAAVDVVLFV 420
Query: 420 REIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCLG 479
REIIE NPKLRVS+I RL+D FYQIRA+RVC+CALWI+GEY SLSEVEN I+TIKQCLG
Sbjct: 421 REIIETNPKLRVSMIQRLIDTFYQIRASRVCSCALWILGEYSLSLSEVENAISTIKQCLG 480
Query: 480 ELPFFSVSEEGEDTDSSKKVQQQASSTTVSSRRPAVLADGTYATQSAASETAFSPPTIVQ 539
++PF++VSEEGE TDS+K Q +S TVSSRRP VLADGTYATQSAA+E A S P++
Sbjct: 481 DVPFYTVSEEGEATDSAKPAQPVVNSVTVSSRRPVVLADGTYATQSAATE-AISTPSVAP 539
Query: 540 GTLTSG-NLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEVNKASSQALLIMVSML 598
G+L+S NLRSL+L+GDFFL AV++CTLTKLVLRLEEVQPS VEVNKA + ALL+M S+L
Sbjct: 540 GSLSSTLNLRSLILSGDFFLAAVISCTLTKLVLRLEEVQPSMVEVNKACTGALLVMTSIL 599
Query: 599 QLGQSPVLPHPIDNDSFDRIVVCIRLLCNTGDNIRKIWLQSCRQSFVKMLSEKQLRESEE 658
QLGQS LPHPIDNDS+DRIV+C+RLLCNTGD++RK+WLQSCRQSF KML+EKQ RE+EE
Sbjct: 600 QLGQSSYLPHPIDNDSYDRIVLCVRLLCNTGDDVRKVWLQSCRQSFAKMLAEKQFRETEE 659
Query: 659 LKAKAQISHAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGEFVKEGDDANKLNRI 718
+KAKAQISHAQPDDLIDFYHLKSR+GMSQLELEDEVQDDLK ATG F K+ DAN+LNRI
Sbjct: 660 MKAKAQISHAQPDDLIDFYHLKSRRGMSQLELEDEVQDDLKAATGGFTKDAYDANRLNRI 719
Query: 719 LQLTGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVERPQNYT 778
LQLTGFSDPVYAEAYVTVHHYDIVLDVT+INRTKETLQNLCLELATMGDLKLV+RPQNYT
Sbjct: 720 LQLTGFSDPVYAEAYVTVHHYDIVLDVTIINRTKETLQNLCLELATMGDLKLVDRPQNYT 779
Query: 779 LAPESSKQIKANIKVSSTETGVIFGNIVYETSNVLERTVVVLNDIHIDIMDYISPAVCTD 838
LAPESSKQI+ANIKVSSTETGVIFGNIVYETSNV+ER+VVVLNDIHIDIMDYISPA C D
Sbjct: 780 LAPESSKQIRANIKVSSTETGVIFGNIVYETSNVMERSVVVLNDIHIDIMDYISPATCAD 839
Query: 839 AAFRTMWAEFEWENKVAVNTVIQDEKEFLDHIIKSTNMKCLTAPSALDGDCGFLAANLYA 898
FR MWAEFEWENKVAVNTVIQ+EKEFLDHIIKSTNMKCLT PSALDG+CGFLAANLYA
Sbjct: 840 VTFRNMWAEFEWENKVAVNTVIQNEKEFLDHIIKSTNMKCLTPPSALDGECGFLAANLYA 899
Query: 899 KSVFGEDALVNVSIEKQTDGKLSGYIRIRSKTQGIALSLGDKITLKQKGGS 949
KSVFGEDALVN+SIEKQ DGKLSGYIRIRSKTQGIALSLGDKITLKQKGGS
Sbjct: 900 KSVFGEDALVNISIEKQFDGKLSGYIRIRSKTQGIALSLGDKITLKQKGGS 950
>sp|P23514|COPB_RAT Coatomer subunit beta OS=Rattus norvegicus GN=Copb1 PE=1 SV=1
Length = 953
Score = 922 bits (2384), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/964 (50%), Positives = 664/964 (68%), Gaps = 32/964 (3%)
Query: 2 EKSCTLLIHFDKGT-PAIANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVR 60
E C LI+ + P +K LE DV +K +A+KK I+++LNGE LP L +TI+R
Sbjct: 5 ENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLMTIIR 64
Query: 61 YVLPSEDHTIQKLLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFL 120
+VLP +DHTI+KLLL++ EI+ KT GR+L EMIL+C R +LQHPNE+IRG TLRFL
Sbjct: 65 FVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGSTLRFL 124
Query: 121 CRLNETEIIEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLS 180
C+L E E++EPL+P++ L+HRH Y+RRNA+LA+ IY+ E L+ DAPE+I L
Sbjct: 125 CKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYR--NFENLIPDAPELIHDFLV 182
Query: 181 TEQDPSAKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNKGEK 240
E+D S KRNAF+ML DQDRA++YL T +D+V +G++LQ+V++ELI KVC N E+
Sbjct: 183 NEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPSER 242
Query: 241 GKYIKIIISLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVL 300
++I+ I +LL + S AV YE AGTLV+LSSAPTAI+AAA Y L++ +SDNNVKLIVL
Sbjct: 243 ARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLIVL 302
Query: 301 DRLNELRS--SHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINEVVLMLKK 358
DRL EL+ +H ++ DL+MD+LR L++P+L++R+KTL + L+L++ RN+ E+V++LKK
Sbjct: 303 DRLVELKEHPAHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVLKK 362
Query: 359 EVVKTQS-GELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVII 417
EV+KT + E E +YRQ+L++ +HSC+++FP++A+ V+ +LM+FL DSN A+A DV+
Sbjct: 363 EVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDSNEAAAADVLE 422
Query: 418 FVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQC 477
FVRE I+ LR+ I+ ++L+ F+ I++ ++ ALWI+GEYC + ++++ + +++
Sbjct: 423 FVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEVRRS 482
Query: 478 LGELPFFSVSEEGEDTDSSKKVQQQASSTTVSSRRPAVLADGTYATQSAASETAFSPPTI 537
LGE+P E E + +++ + TV + V GTYATQSA S S PT
Sbjct: 483 LGEIPIV----ESEIKKEAGELKPE-EEITVGPVQKLVTEMGTYATQSALSS---SRPT- 533
Query: 538 VQGTLTSGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEVNKASSQALLIMVSM 597
+ LR LL GDFF+ A +A TLTK+ LR + + + N ++A+L+M ++
Sbjct: 534 -KKEEDRPPLRGFLLDGDFFVAASLATTLTKIALRYVALVQEKKKQNSFVAEAMLLMATI 592
Query: 598 LQLGQSPVLPHPIDNDSFDRIVVCIRLLCNTGDNIRKIWLQSCRQSFVKMLSEKQLRESE 657
L LG+S + PI +D DRI +C+++L + I+ + CRQS +MLS K E E
Sbjct: 593 LHLGKSSLPKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSLSQMLSAK--LEEE 650
Query: 658 ELKAKAQISH----AQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGEFV-KEGDD- 711
+L K + QPDD I F L ++ M+ ED+ Q L A G KE D
Sbjct: 651 KLSQKKESEKRNVTVQPDDPISFMQLTAKNEMNC--KEDQFQLSLLAAMGNTQRKEAADP 708
Query: 712 -ANKLNRILQLTGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKL 770
A+KLN++ QLTGFSDPVYAEAYV V+ YDIVLDV V+N+T +TLQN LELAT+GDLKL
Sbjct: 709 LASKLNKVTQLTGFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKL 768
Query: 771 VERPQNYTLAPESSKQIKANIKVSSTETGVIFGNIVYETSNVL-ERTVVVLNDIHIDIMD 829
VE+P TLAP IKAN+KV+STE G+IFGNIVY+ S +R VVL+DIHIDIMD
Sbjct: 769 VEKPSPLTLAPHDFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMD 828
Query: 830 YISPAVCTDAAFRTMWAEFEWENKVAVNTVIQDEKEFLDHIIKSTNMKCLTAPSALDGDC 889
YI PA CTDA FR MWAEFEWENKV VNT + D ++L HI+KSTNMKCLT AL G C
Sbjct: 829 YIQPATCTDAEFRQMWAEFEWENKVTVNTNVTDLNDYLQHILKSTNMKCLTPEKALSGYC 888
Query: 890 GFLAANLYAKSVFGEDALVNVSIEKQT----DGKLSGYIRIRSKTQGIALSLGDKITLKQ 945
GF+AANLYA+S+FGEDAL NVSIEK D ++G+IRIR+K+QG+ALSLGDKI L Q
Sbjct: 889 GFMAANLYARSIFGEDALANVSIEKPVHQGPDAAVTGHIRIRAKSQGMALSLGDKINLSQ 948
Query: 946 KGGS 949
K S
Sbjct: 949 KKTS 952
>sp|Q9JIF7|COPB_MOUSE Coatomer subunit beta OS=Mus musculus GN=Copb1 PE=1 SV=1
Length = 953
Score = 922 bits (2382), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/964 (50%), Positives = 664/964 (68%), Gaps = 32/964 (3%)
Query: 2 EKSCTLLIHFDKGT-PAIANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVR 60
E C LI+ + P +K LE DV +K +A+KK I+++LNGE LP L +TI+R
Sbjct: 5 ENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLMTIIR 64
Query: 61 YVLPSEDHTIQKLLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFL 120
+VLP +DHTI+KLLL++ EI+ KT GR+L EMIL+C R +LQHPNE+IRG TLRFL
Sbjct: 65 FVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGSTLRFL 124
Query: 121 CRLNETEIIEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLS 180
C+L E E++EPL+P++ L+HRH Y+RRNA+LA+ IY+ E L+ DAPE+I L
Sbjct: 125 CKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYR--NFEHLIPDAPELIHDFLV 182
Query: 181 TEQDPSAKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNKGEK 240
E+D S KRNAF+ML DQDRA++YL T +D+V +G++LQ+V++ELI KVC N E+
Sbjct: 183 NEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPSER 242
Query: 241 GKYIKIIISLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVL 300
++I+ I +LL + S AV YE AGTLV+LSSAPTAI+AAA Y L++ +SDNNVKLIVL
Sbjct: 243 ARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLIVL 302
Query: 301 DRLNELRS--SHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINEVVLMLKK 358
DRL EL+ +H ++ DL+MD+LR L++P+L++R+KTL + L+L++ RN+ E+V++LKK
Sbjct: 303 DRLVELKEHPAHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVLKK 362
Query: 359 EVVKTQS-GELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVII 417
EV+KT + E E +YRQ+L++ +HSC+++FP++A+ V+ +LM+FL DSN A+A DV+
Sbjct: 363 EVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDSNEAAAADVLE 422
Query: 418 FVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQC 477
FVRE I+ LR+ I+ ++L+ F+ I++ ++ ALWI+GEYC + ++++ + +++
Sbjct: 423 FVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEVRRS 482
Query: 478 LGELPFFSVSEEGEDTDSSKKVQQQASSTTVSSRRPAVLADGTYATQSAASETAFSPPTI 537
LGE+P E E + +++ + TV + V GTYATQSA S S PT
Sbjct: 483 LGEIPIV----ESEIKKEAGELKPE-EEITVGPVQKLVTEMGTYATQSALSS---SRPT- 533
Query: 538 VQGTLTSGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEVNKASSQALLIMVSM 597
+ LR LL GDFF+ A +A TLTK+ LR + + + N ++A+L+M ++
Sbjct: 534 -KKEEDRPPLRGFLLDGDFFVAASLATTLTKIALRYVALVQEKKKQNSFVAEAMLLMATI 592
Query: 598 LQLGQSPVLPHPIDNDSFDRIVVCIRLLCNTGDNIRKIWLQSCRQSFVKMLSEKQLRESE 657
L LG+S + PI +D DRI +C+++L + I+ + CRQS +MLS K E E
Sbjct: 593 LHLGKSSLPKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSLSQMLSAK--LEEE 650
Query: 658 ELKAKAQISH----AQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGEFV-KEGDD- 711
+L K + QPDD I F L ++ M+ ED+ Q L A G KE D
Sbjct: 651 KLSQKKESEKRNVTVQPDDPISFMQLTAKNEMNC--KEDQFQLSLLAAMGNTQRKEAADP 708
Query: 712 -ANKLNRILQLTGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKL 770
A+KLN++ QLTGFSDPVYAEAYV V+ YDIVLDV V+N+T +TLQN LELAT+GDLKL
Sbjct: 709 LASKLNKVTQLTGFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKL 768
Query: 771 VERPQNYTLAPESSKQIKANIKVSSTETGVIFGNIVYETSNVL-ERTVVVLNDIHIDIMD 829
VE+P TLAP IKAN+KV+STE G+IFGNIVY+ S +R VVL+DIHIDIMD
Sbjct: 769 VEKPSPLTLAPHDFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMD 828
Query: 830 YISPAVCTDAAFRTMWAEFEWENKVAVNTVIQDEKEFLDHIIKSTNMKCLTAPSALDGDC 889
YI PA CTDA FR MWAEFEWENKV VNT + D ++L HI+KSTNMKCLT AL G C
Sbjct: 829 YIQPATCTDAEFRQMWAEFEWENKVTVNTNMTDLNDYLQHILKSTNMKCLTPEKALSGYC 888
Query: 890 GFLAANLYAKSVFGEDALVNVSIEKQT----DGKLSGYIRIRSKTQGIALSLGDKITLKQ 945
GF+AANLYA+S+FGEDAL NVSIEK D ++G+IRIR+K+QG+ALSLGDKI L Q
Sbjct: 889 GFMAANLYARSIFGEDALANVSIEKPVHQGPDAAVTGHIRIRAKSQGMALSLGDKINLSQ 948
Query: 946 KGGS 949
K S
Sbjct: 949 KKTS 952
>sp|Q5ZIA5|COPB_CHICK Coatomer subunit beta OS=Gallus gallus GN=COPB1 PE=2 SV=1
Length = 953
Score = 920 bits (2378), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/964 (50%), Positives = 661/964 (68%), Gaps = 32/964 (3%)
Query: 2 EKSCTLLIHFDKGT-PAIANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVR 60
E C LI+ + P +K LE DV K +A+KK I+++LNGE LP L +TI+R
Sbjct: 5 ENVCYTLINVPMDSEPPSEISLKNDLEKGDVKLKTEALKKVIIMILNGEKLPGLLMTIIR 64
Query: 61 YVLPSEDHTIQKLLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFL 120
+VLP +DHTI+KLLL++ EI+ KT GR+L EMIL+C R +LQHPNE+IRG TLRFL
Sbjct: 65 FVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLQEMILVCDAYRKDLQHPNEFIRGSTLRFL 124
Query: 121 CRLNETEIIEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLS 180
C+L E E++EPL+P++ L+HRH Y+RRNA+LA+ IY+ E L+ DAPE+I L
Sbjct: 125 CKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYR--NFEHLIPDAPELIHDFLV 182
Query: 181 TEQDPSAKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNKGEK 240
E+D S KRNAF+ML DQDRA++YL T +D+V +G++LQ+V++ELI KVC N E+
Sbjct: 183 NEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPSER 242
Query: 241 GKYIKIIISLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVL 300
++I+ I +LL + S AV YE AGTLV+LSSAPTAI+AAA Y L++ +SDNNVKLIVL
Sbjct: 243 ARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLIVL 302
Query: 301 DRLNELRS--SHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINEVVLMLKK 358
DRL EL+ SH ++ DL+MD+LR L++P+L++R+KTL + L+L++ RN+ E+V++LKK
Sbjct: 303 DRLVELKEHPSHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVLKK 362
Query: 359 EVVKTQS-GELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVII 417
EV+KT + E E +YRQ+L++ +HSC+++FP++A+ V+ +LM+FL D+N A+A DV+
Sbjct: 363 EVIKTNNVTEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDNNEAAAADVLE 422
Query: 418 FVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQC 477
FVRE I+ LR I+ ++L+ F+ I++ ++ ALWI+GEYC + ++++ + +++
Sbjct: 423 FVREAIQRFDNLRPLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEVRRS 482
Query: 478 LGELPFFSVSEEGEDTDSSKKVQQQASSTTVSSRRPAVLADGTYATQSAASETAFSPPTI 537
LGE+P E E + +++ + TV + V GTYATQSA S S PT
Sbjct: 483 LGEIPIV----ESEIKKEAGELKPE-EEVTVGPVQKLVTEMGTYATQSALSS---SRPT- 533
Query: 538 VQGTLTSGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEVNKASSQALLIMVSM 597
+ LR LL GDFF+ A +A TLTK+ LR + + + N ++A+L+M ++
Sbjct: 534 -KKEEDRPPLRGFLLDGDFFVAASLATTLTKIALRYVSLVQEKKKQNSFIAEAMLLMATI 592
Query: 598 LQLGQSPVLPHPIDNDSFDRIVVCIRLLCNTGDNIRKIWLQSCRQSFVKMLSEKQLRESE 657
L LG+S + PI +D DRI +C+++L + I+ + CRQS MLS K E E
Sbjct: 593 LHLGKSSLPKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSLSHMLSAK--LEEE 650
Query: 658 ELKAKAQISH----AQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGEFV-KEGDD- 711
+L K + QPDD I F L ++ MS ED+ Q L A G KE D
Sbjct: 651 KLSQKKESEKRNVTVQPDDPISFMQLTAKNEMSS--KEDQFQLSLLAAMGNTQRKEAADP 708
Query: 712 -ANKLNRILQLTGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKL 770
A+KLN++ QLTGFSDPVYAEAYV V+ YDIVLDV V+N+T +TLQN LELAT+GDLKL
Sbjct: 709 LASKLNKVTQLTGFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKL 768
Query: 771 VERPQNYTLAPESSKQIKANIKVSSTETGVIFGNIVYETSNVL-ERTVVVLNDIHIDIMD 829
VE+P TLAP IKAN+KV+STE G+IFGNIVY+ S +R VVL+DIHIDIMD
Sbjct: 769 VEKPSPLTLAPHDFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMD 828
Query: 830 YISPAVCTDAAFRTMWAEFEWENKVAVNTVIQDEKEFLDHIIKSTNMKCLTAPSALDGDC 889
YI PA CTDA FR MWAEFEWENKV VNT I D E+L HI+KSTNMKCLT AL G C
Sbjct: 829 YIQPASCTDAEFRQMWAEFEWENKVTVNTNIIDLNEYLQHILKSTNMKCLTPEKALSGYC 888
Query: 890 GFLAANLYAKSVFGEDALVNVSIEKQ----TDGKLSGYIRIRSKTQGIALSLGDKITLKQ 945
GF+AANLYA+S+FGEDAL NVSIEK + ++G+IRIR+K+QG+ALSLGDKI L Q
Sbjct: 889 GFMAANLYARSIFGEDALANVSIEKPIHLGPEAPVTGHIRIRAKSQGMALSLGDKINLSQ 948
Query: 946 KGGS 949
K S
Sbjct: 949 KKTS 952
>sp|A0JN39|COPB_BOVIN Coatomer subunit beta OS=Bos taurus GN=COPB1 PE=1 SV=1
Length = 953
Score = 920 bits (2377), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/962 (50%), Positives = 665/962 (69%), Gaps = 28/962 (2%)
Query: 2 EKSCTLLIHFDKGT-PAIANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVR 60
E C LI+ + P +K LE DV +K +A+KK I+++LNGE LP L +TI+R
Sbjct: 5 ENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLMTIIR 64
Query: 61 YVLPSEDHTIQKLLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFL 120
+VLP +DHTI+KLLL++ EI+ KT GR+L EMIL+C R +LQHPNE+IRG TLRFL
Sbjct: 65 FVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGSTLRFL 124
Query: 121 CRLNETEIIEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLS 180
C+L E E++EPL+P++ L+HRH Y+RRNA+LA+ IY+ E L+ DAPE+I L
Sbjct: 125 CKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYR--NFEHLIPDAPELIHDFLV 182
Query: 181 TEQDPSAKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNKGEK 240
E+D S KRNAF+ML DQDRA++YL T +D+V +G++LQ+V++ELI KVC N E+
Sbjct: 183 NEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPSER 242
Query: 241 GKYIKIIISLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVL 300
++I+ I +LL + S AV YE AGTLV+LSSAPTAI+AAA Y L++ +SDNNVKLIVL
Sbjct: 243 ARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLIVL 302
Query: 301 DRLNELRS--SHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINEVVLMLKK 358
DRL EL+ +H ++ DL+MD+LR L++P+L++R+KTL + L+L++ RN+ E+V++LKK
Sbjct: 303 DRLIELKEHPAHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVLKK 362
Query: 359 EVVKTQS-GELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVII 417
EV+KT + E E +YRQ+L++ +HSC+++FP++A+ V+ +LM+FL DSN A+A DV+
Sbjct: 363 EVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDSNEAAAADVLE 422
Query: 418 FVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQC 477
FVRE I+ LR+ I+ ++L+ F+ I++ ++ ALWI+GEYC + ++++ + +++
Sbjct: 423 FVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKDDIQSVMTEVRRS 482
Query: 478 LGELPFFSVSEEGEDTDSSKKVQQQASSTTVSSRRPAVLADGTYATQSAASETAFSPPTI 537
LGE+P E E + +++ + TV + V GTYATQSA S S PT
Sbjct: 483 LGEIPIV----ESEIKKEAGELKPE-EEITVGPVQKLVTEMGTYATQSALSS---SRPT- 533
Query: 538 VQGTLTSGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEVNKASSQALLIMVSM 597
+ LR LL GDFF+ A +A TLTK+ LR + + + N ++A+L+M ++
Sbjct: 534 -KKEEERPPLRGFLLDGDFFVAASLATTLTKIALRYVALVQEKKKQNSFVAEAMLLMATI 592
Query: 598 LQLGQSPVLPHPIDNDSFDRIVVCIRLLCNTGDNIRKIWLQSCRQSFVKMLSEKQLRE-- 655
L LG+S + PI +D DRI +C+++L + I+ + CRQS MLS K E
Sbjct: 593 LHLGKSSLPKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSLSHMLSAKLEEEKL 652
Query: 656 SEELKAKAQISHAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGEFV-KEGDD--A 712
S++ +++ + QPDD I F L ++ M+ ED+ Q L A G KE D A
Sbjct: 653 SQKKESEKRNVTVQPDDPISFMQLTAKNEMNC--KEDQFQLSLLAAMGNTQRKEAADPLA 710
Query: 713 NKLNRILQLTGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVE 772
+KLN++ QLTGFSDPVYAEAYV V+ YDIVLDV V+N+T +TLQN LELAT+GDLKLVE
Sbjct: 711 SKLNKVTQLTGFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVE 770
Query: 773 RPQNYTLAPESSKQIKANIKVSSTETGVIFGNIVYETSNVL-ERTVVVLNDIHIDIMDYI 831
+P TLAP IKAN+KV+STE G+IFGNIVY+ S +R VVL+DIHIDIMDYI
Sbjct: 771 KPSPLTLAPHDFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYI 830
Query: 832 SPAVCTDAAFRTMWAEFEWENKVAVNTVIQDEKEFLDHIIKSTNMKCLTAPSALDGDCGF 891
PA CTDA FR MWAEFEWENKV VNT I D ++L HI+KSTNMKCLT AL G CGF
Sbjct: 831 QPATCTDAEFRQMWAEFEWENKVTVNTNIVDLNDYLQHILKSTNMKCLTPEKALSGYCGF 890
Query: 892 LAANLYAKSVFGEDALVNVSIEKQ----TDGKLSGYIRIRSKTQGIALSLGDKITLKQKG 947
+AANLYA+S+FGEDAL NVSIEK + ++G+IRIR+K+QG+ALSLGDKI L QK
Sbjct: 891 MAANLYARSIFGEDALANVSIEKPIQQGPEAPVTGHIRIRAKSQGMALSLGDKINLSQKK 950
Query: 948 GS 949
S
Sbjct: 951 NS 952
>sp|P53618|COPB_HUMAN Coatomer subunit beta OS=Homo sapiens GN=COPB1 PE=1 SV=3
Length = 953
Score = 919 bits (2375), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/962 (50%), Positives = 665/962 (69%), Gaps = 28/962 (2%)
Query: 2 EKSCTLLIHFDKGT-PAIANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVR 60
E C LI+ + P +K LE DV +K +A+KK I+++LNGE LP L +TI+R
Sbjct: 5 ENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLMTIIR 64
Query: 61 YVLPSEDHTIQKLLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFL 120
+VLP +DHTI+KLLL++ EI+ KT GR+L EMIL+C R +LQHPNE+IRG TLRFL
Sbjct: 65 FVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGSTLRFL 124
Query: 121 CRLNETEIIEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLS 180
C+L E E++EPL+P++ L+HRH Y+RRNA+LA+ IY+ E L+ DAPE+I L
Sbjct: 125 CKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYR--NFEHLIPDAPELIHDFLV 182
Query: 181 TEQDPSAKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNKGEK 240
E+D S KRNAF+ML DQDRA++YL T +D+V +G++LQ+V++ELI KVC N E+
Sbjct: 183 NEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPSER 242
Query: 241 GKYIKIIISLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVL 300
++I+ I +LL + S AV YE AGTLV+LSSAPTAI+AAA Y L++ +SDNNVKLIVL
Sbjct: 243 ARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLIVL 302
Query: 301 DRLNELRS--SHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINEVVLMLKK 358
DRL EL+ +H ++ DL+MD+LR L++P+L++R+KTL + L+L++ RN+ E+V++LKK
Sbjct: 303 DRLIELKEHPAHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVLKK 362
Query: 359 EVVKTQS-GELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVII 417
EV+KT + E E +YRQ+L++ +HSC+++FP++A+ V+ +LM+FL D+N A+A DV+
Sbjct: 363 EVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDNNEAAAADVLE 422
Query: 418 FVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQC 477
FVRE I+ LR+ I+ ++L+ F+ I++ ++ ALWI+GEYC + ++++ + I++
Sbjct: 423 FVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEIRRS 482
Query: 478 LGELPFFSVSEEGEDTDSSKKVQQQASSTTVSSRRPAVLADGTYATQSAASETAFSPPTI 537
LGE+P E E + +++ + TV + V GTYATQSA S S PT
Sbjct: 483 LGEIPIV----ESEIKKEAGELKPE-EEITVGPVQKLVTEMGTYATQSALSS---SRPT- 533
Query: 538 VQGTLTSGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEVNKASSQALLIMVSM 597
+ LR LL GDFF+ A +A TLTK+ LR + + + N ++A+L+M ++
Sbjct: 534 -KKEEDRPPLRGFLLDGDFFVAASLATTLTKIALRYVALVQEKKKQNSFVAEAMLLMATI 592
Query: 598 LQLGQSPVLPHPIDNDSFDRIVVCIRLLCNTGDNIRKIWLQSCRQSFVKMLSEKQLRE-- 655
L LG+S + PI +D DRI +C+++L + I+ + CRQS MLS K E
Sbjct: 593 LHLGKSSLPKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSLSHMLSAKLEEEKL 652
Query: 656 SEELKAKAQISHAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGEFV-KEGDD--A 712
S++ +++ + QPDD I F L ++ M+ ED+ Q L A G KE D A
Sbjct: 653 SQKKESEKRNVTVQPDDPISFMQLTAKNEMNC--KEDQFQLSLLAAMGNTQRKEAADPLA 710
Query: 713 NKLNRILQLTGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVE 772
+KLN++ QLTGFSDPVYAEAYV V+ YDIVLDV V+N+T +TLQN LELAT+GDLKLVE
Sbjct: 711 SKLNKVTQLTGFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVE 770
Query: 773 RPQNYTLAPESSKQIKANIKVSSTETGVIFGNIVYETSNVL-ERTVVVLNDIHIDIMDYI 831
+P TLAP IKAN+KV+STE G+IFGNIVY+ S +R VVL+DIHIDIMDYI
Sbjct: 771 KPSPLTLAPHDFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYI 830
Query: 832 SPAVCTDAAFRTMWAEFEWENKVAVNTVIQDEKEFLDHIIKSTNMKCLTAPSALDGDCGF 891
PA CTDA FR MWAEFEWENKV VNT + D ++L HI+KSTNMKCLT AL G CGF
Sbjct: 831 QPATCTDAEFRQMWAEFEWENKVTVNTNMVDLNDYLQHILKSTNMKCLTPEKALSGYCGF 890
Query: 892 LAANLYAKSVFGEDALVNVSIEKQ----TDGKLSGYIRIRSKTQGIALSLGDKITLKQKG 947
+AANLYA+S+FGEDAL NVSIEK D ++G+IRIR+K+QG+ALSLGDKI L QK
Sbjct: 891 MAANLYARSIFGEDALANVSIEKPIHQGPDAAVTGHIRIRAKSQGMALSLGDKINLSQKK 950
Query: 948 GS 949
S
Sbjct: 951 TS 952
>sp|D2SW95|COPB_PIG Coatomer subunit beta OS=Sus scrofa GN=COPB1 PE=2 SV=1
Length = 953
Score = 916 bits (2367), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/962 (50%), Positives = 662/962 (68%), Gaps = 28/962 (2%)
Query: 2 EKSCTLLIHFDKGT-PAIANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVR 60
E C LI+ + P +K LE DV +K +A+KK I+++LNGE LP L +TI+R
Sbjct: 5 ENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLMTIIR 64
Query: 61 YVLPSEDHTIQKLLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFL 120
+VLP +DHTI+KLLL++ EI+ KT GR+L EMIL+C R +LQHPNE+IRG TLRFL
Sbjct: 65 FVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGSTLRFL 124
Query: 121 CRLNETEIIEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLS 180
C+L E E++EPL+P++ L+HRH Y+RRNA+LA+ IY+ E L+ DAPE+I L
Sbjct: 125 CKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYR--NFEHLIPDAPELIHDFLV 182
Query: 181 TEQDPSAKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNKGEK 240
E+D S KRNAF+ML DQDRA++YL T +D+V +G++LQ+V++ELI KVC N E+
Sbjct: 183 NEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPSER 242
Query: 241 GKYIKIIISLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVL 300
++I+ I +LL + S AV YE AGTLV+LSSAPTAI+AAA Y L++ +SDNNVKLIVL
Sbjct: 243 ARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLIVL 302
Query: 301 DRLNELRS--SHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINEVVLMLKK 358
DRL EL+ +H ++ DL+MD+LR L++P+L++R+KTL + L+L++ RN+ E+V++LKK
Sbjct: 303 DRLIELKEHPAHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVLKK 362
Query: 359 EVVKTQS-GELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVII 417
EV+KT + E E +YRQ+L++ +HSC+++FP++A+ V+ +LM+FL DSN A+A DV+
Sbjct: 363 EVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDSNEAAAADVLE 422
Query: 418 FVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQC 477
FVRE I+ LR+ I+ ++L+ F+ I++ ++ ALWI+GEYC + ++++ + +++
Sbjct: 423 FVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEVRRS 482
Query: 478 LGELPFFSVSEEGEDTDSSKKVQQQASSTTVSSRRPAVLADGTYATQSAASETAFSPPTI 537
LGE+P E E + +++ + TV + V GTYATQSA S S PT
Sbjct: 483 LGEIPIV----ESEIKKEAGELKPE-EEITVGPVQKLVTKMGTYATQSALSS---SRPT- 533
Query: 538 VQGTLTSGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEVNKASSQALLIMVSM 597
+ LR LL GDFF+ A +A TLTK+ LR + + N ++A+L+M ++
Sbjct: 534 -KKEEERPPLRGFLLDGDFFVAASLATTLTKIALRYVALVQEKKRQNSFVAEAMLLMATI 592
Query: 598 LQLGQSPVLPHPIDNDSFDRIVVCIRLLCNTGDNIRKIWLQSCRQSFVKMLSEKQLRE-- 655
L LG+S PI +D DRI +C+++L + I+ + CRQS MLS K E
Sbjct: 593 LHLGKSSPPKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSLSHMLSAKLEEEKL 652
Query: 656 SEELKAKAQISHAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGEFV-KEGDD--A 712
S++ +++ + QPDD I F L ++ M+ ED+ Q L A G KE D A
Sbjct: 653 SQKKESEKRNVTVQPDDPISFMQLTAKNEMNC--KEDQFQLSLLAAMGNTQRKEAADPLA 710
Query: 713 NKLNRILQLTGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVE 772
+KLN++ QLTGFSDPVYAEAYV V+ YDIVLDV V+N+T +TLQN LELAT+GDLKLVE
Sbjct: 711 SKLNKVTQLTGFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVE 770
Query: 773 RPQNYTLAPESSKQIKANIKVSSTETGVIFGNIVYETSNVL-ERTVVVLNDIHIDIMDYI 831
+P TLAP IKAN+KV+STE G+IFGNIVY+ S +R VVL+DIHIDIMDYI
Sbjct: 771 KPSPLTLAPHDFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYI 830
Query: 832 SPAVCTDAAFRTMWAEFEWENKVAVNTVIQDEKEFLDHIIKSTNMKCLTAPSALDGDCGF 891
PA CTDA FR MWAEFEWENKV VNT I D ++L HI+KSTNMKCLT AL G CGF
Sbjct: 831 QPATCTDAEFRQMWAEFEWENKVTVNTNIIDLNDYLQHILKSTNMKCLTPEKALSGYCGF 890
Query: 892 LAANLYAKSVFGEDALVNVSIEKQ----TDGKLSGYIRIRSKTQGIALSLGDKITLKQKG 947
+AANLYA+S+FGEDAL NVSIEK + ++G+IRIR+K QG+ALSLGDKI L QK
Sbjct: 891 MAANLYARSIFGEDALANVSIEKPIQQGPEAPVTGHIRIRAKGQGMALSLGDKINLSQKK 950
Query: 948 GS 949
S
Sbjct: 951 TS 952
>sp|Q5R922|COPB_PONAB Coatomer subunit beta OS=Pongo abelii GN=COPB1 PE=2 SV=1
Length = 953
Score = 916 bits (2367), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/962 (49%), Positives = 664/962 (69%), Gaps = 28/962 (2%)
Query: 2 EKSCTLLIHFDKGT-PAIANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVR 60
E C LI+ + P +K LE DV +K +A+KK I+++LNGE LP L +TI+R
Sbjct: 5 ENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLMTIIR 64
Query: 61 YVLPSEDHTIQKLLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFL 120
+VLP +DHTI+KLLL++ EI+ KT GR+L EMIL+C R +LQHPNE+IRG TLRFL
Sbjct: 65 FVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGSTLRFL 124
Query: 121 CRLNETEIIEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLS 180
C+L E E++EPL+P++ L+HRH Y+RRNA+LA+ IY+ E L+ DAPE+I L
Sbjct: 125 CKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYR--NFEHLIPDAPELIHDFLV 182
Query: 181 TEQDPSAKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNKGEK 240
E+D S KRNAF+ML DQDRA++YL T +D+V +G++LQ+V++ELI K C N E+
Sbjct: 183 DEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKACHANPSER 242
Query: 241 GKYIKIIISLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVL 300
++I+ I +LL + S AV YE AGTLV+LSSAPTAI+AAA Y L++ +SDNNVKLIVL
Sbjct: 243 ARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLIVL 302
Query: 301 DRLNELRS--SHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINEVVLMLKK 358
DRL EL+ +H ++ DL+MD+LR L++P+L++R+KTL + L+L++ RN+ E+V++LKK
Sbjct: 303 DRLIELKEHPAHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVLKK 362
Query: 359 EVVKTQS-GELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVII 417
EV+KT + E E +YRQ+L++ +HSC+++FP++A+ V+ +LM+FL D+N A+A DV+
Sbjct: 363 EVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDNNEAAAADVLE 422
Query: 418 FVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQC 477
FVRE I+ LR+ I+ ++L+ F+ I++ ++ ALWI+GEYC + ++++ + I++
Sbjct: 423 FVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEIRRS 482
Query: 478 LGELPFFSVSEEGEDTDSSKKVQQQASSTTVSSRRPAVLADGTYATQSAASETAFSPPTI 537
LGE+P E E + +++ + TV + V GTYATQSA S S PT
Sbjct: 483 LGEIPIV----ESEIKKEAGELKPE-EEITVGPVQKLVTEMGTYATQSALSS---SRPT- 533
Query: 538 VQGTLTSGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEVNKASSQALLIMVSM 597
+ LR LL GDFF+ A +A TLTK+ LR + + + N ++A+L+M ++
Sbjct: 534 -KKEEDRPPLRGFLLDGDFFVAASLATTLTKIALRYVALVQEKKKQNSFVAEAMLLMATI 592
Query: 598 LQLGQSPVLPHPIDNDSFDRIVVCIRLLCNTGDNIRKIWLQSCRQSFVKMLSEKQLRE-- 655
L LG+S + PI +D DRI +C+++L + I+ + CRQS MLS K E
Sbjct: 593 LHLGKSSLPKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSLSHMLSAKLEEEKL 652
Query: 656 SEELKAKAQISHAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGEFV-KEGDD--A 712
S++ +++ + QPDD I F L ++ M+ ED+ Q L A G KE D A
Sbjct: 653 SQKKESEKRNVTVQPDDPISFMQLTAKNEMNC--KEDQFQLSLLAAMGNTQRKEAADPLA 710
Query: 713 NKLNRILQLTGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVE 772
+KLN++ QLTGFSDPVYAEAYV V+ YDIVLDV V+N+T +TLQN LELAT+GDLKLVE
Sbjct: 711 SKLNKVTQLTGFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVE 770
Query: 773 RPQNYTLAPESSKQIKANIKVSSTETGVIFGNIVYETSNVL-ERTVVVLNDIHIDIMDYI 831
+P TLAP IKAN+KV+STE G+IFGNIVY+ S +R VVL+DIHIDIMDYI
Sbjct: 771 KPSPLTLAPHDFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYI 830
Query: 832 SPAVCTDAAFRTMWAEFEWENKVAVNTVIQDEKEFLDHIIKSTNMKCLTAPSALDGDCGF 891
PA CTDA FR MWAEFEWENKV VNT + D ++L HI+KSTNMKCLT AL G CGF
Sbjct: 831 QPATCTDAEFRQMWAEFEWENKVTVNTNMIDLNDYLRHILKSTNMKCLTPEKALSGYCGF 890
Query: 892 LAANLYAKSVFGEDALVNVSIEKQ----TDGKLSGYIRIRSKTQGIALSLGDKITLKQKG 947
+AANLYA+S+FGEDAL NVSIEK D ++G+IRIR+K+QG+ALSLGDKI L QK
Sbjct: 891 MAANLYARSIFGEDALANVSIEKPIHQGPDAAVTGHIRIRAKSQGMALSLGDKINLSQKK 950
Query: 948 GS 949
S
Sbjct: 951 TS 952
>sp|Q66HV4|COPB_DANRE Coatomer subunit beta OS=Danio rerio GN=copb1 PE=2 SV=1
Length = 953
Score = 905 bits (2340), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/968 (49%), Positives = 662/968 (68%), Gaps = 46/968 (4%)
Query: 2 EKSCTLLIHF-DKGTPAIANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVR 60
E C LI+ + P +K LE ++ AK +A+KK I+++LNGE LP L +TI+R
Sbjct: 5 ENVCYTLINVTNDSEPPSEVSLKTDLEKGEIKAKTEALKKVIIMILNGEKLPGLLMTIIR 64
Query: 61 YVLPSEDHTIQKLLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFL 120
+VLP +DHTI+KLLL++ EI+ KT G++L EMIL+C R +LQHPNE+IRG TLRFL
Sbjct: 65 FVLPLQDHTIKKLLLVFWEIVPKTTPDGKLLQEMILVCDAYRKDLQHPNEFIRGSTLRFL 124
Query: 121 CRLNETEIIEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLS 180
C+L E+E++EPL+P++ L+HRH Y+RRNA+LA+ IY+ E L+ DAPE+I L
Sbjct: 125 CKLKESELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYR--NFEHLIPDAPELIHDFLV 182
Query: 181 TEQDPSAKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNKGEK 240
E+D S KRNAF+ML DQDRA++YL T +D+V +G++LQ+V++ELI KVC N E+
Sbjct: 183 NEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVHTFGDILQLVIVELIYKVCHANPSER 242
Query: 241 GKYIKIIISLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVL 300
++I+ I +LL + S AV YE AGTLV+LSSAPTAI+AAA Y L++ +SDNNVKLIVL
Sbjct: 243 ARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLIVL 302
Query: 301 DRLNELRS--SHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINEVVLMLKK 358
DRL EL+ +H ++ DL+MD+LR L +P+L++R+KTL + L+L++ RN+ E+V++LKK
Sbjct: 303 DRLIELKEHPTHERVLQDLVMDILRVLTTPDLEVRKKTLQLALDLVSSRNVEELVIVLKK 362
Query: 359 EVVKTQS-GELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVII 417
EV+KT + E E +YRQ+L++ +HSC+++FP++A+ V+ +LM+FL D+N A+A DV+
Sbjct: 363 EVIKTNNVTEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDTNEAAAADVLE 422
Query: 418 FVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQC 477
FVRE I+ LR II ++L+ F+ I+ ++ ALWI+GEYC + ++++ + +++
Sbjct: 423 FVREAIQRFDNLRPLIIEKMLEVFHAIKTVKIYRGALWILGEYCSTKEDIQSVMTEVRRS 482
Query: 478 LGELPFFSVSEEGEDTDSSKKVQQQASSTTVSSRRPAVLAD-GTYATQSAASETAFS--- 533
LGE+P E E + +V+ + T + P ++ + GTY TQSA S + S
Sbjct: 483 LGEIPIV----ENELKKEAGEVKPEEEVTAAPA--PKLVTEMGTYVTQSALSTSRPSKKE 536
Query: 534 ---PPTIVQGTLTSGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEVNKASSQA 590
PP LR L+ GDF++ A +A TLTK+ LR + + N ++A
Sbjct: 537 EDRPP-----------LRGFLMDGDFYVAASLATTLTKVALRYVALAEDKRRQNSFVAEA 585
Query: 591 LLIMVSMLQLGQSPVLPHPIDNDSFDRIVVCIRLLCNTGDNIRKIWLQSCRQSFVKMLS- 649
+LIM ++L LG+S + PI +D DRI +C+++L + I+ + CR+S ML+
Sbjct: 586 MLIMATVLHLGKSSLPKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRRSLSHMLAV 645
Query: 650 ---EKQLRESEELKAKAQISHAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGEFV 706
E++L + +E K ++ Q DD I F L ++ M+ ED+ Q L A G
Sbjct: 646 RLEEEKLSQKKE-SEKRNVT-VQADDPISFMQLTAKNEMAS--KEDQFQLSLLAAMGNTQ 701
Query: 707 -KEGDD--ANKLNRILQLTGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELA 763
KE D A+KLN++ QLTGFSDPVYAEAYV V+ YDIVLDV V+N+T +TLQN LELA
Sbjct: 702 RKEATDPLASKLNKVTQLTGFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELA 761
Query: 764 TMGDLKLVERPQNYTLAPESSKQIKANIKVSSTETGVIFGNIVYETSNVL-ERTVVVLND 822
T+GDLKLVE+P TLAP IKAN+KV+STE G+IFGNIVY+ S +R VVL+D
Sbjct: 762 TLGDLKLVEKPSPLTLAPHDFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSD 821
Query: 823 IHIDIMDYISPAVCTDAAFRTMWAEFEWENKVAVNTVIQDEKEFLDHIIKSTNMKCLTAP 882
IHIDIMDYI PA CTDA FR MWAEFEWENKV VNT I D ++L HI+KSTNMKCLT
Sbjct: 822 IHIDIMDYIQPASCTDAEFRQMWAEFEWENKVTVNTNITDLNDYLLHILKSTNMKCLTPE 881
Query: 883 SALDGDCGFLAANLYAKSVFGEDALVNVSIEKQ----TDGKLSGYIRIRSKTQGIALSLG 938
AL G CGF+AANLYA+S+FGEDAL NVSIEK D ++G+IRIR+K+QG+ALSLG
Sbjct: 882 KALSGICGFMAANLYARSIFGEDALANVSIEKPIHLGVDAPVNGHIRIRAKSQGMALSLG 941
Query: 939 DKITLKQK 946
DKI L QK
Sbjct: 942 DKINLSQK 949
>sp|Q29G21|COPB_DROPS Coatomer subunit beta OS=Drosophila pseudoobscura pseudoobscura
GN=betaCop PE=3 SV=2
Length = 965
Score = 905 bits (2340), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/951 (49%), Positives = 642/951 (67%), Gaps = 38/951 (3%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
++K+ LE D K++ +KK I LLLNGE P L +TI+R+VLP +DHTI+KLLL++ EI
Sbjct: 22 QLKQDLEKGDTNHKIETLKKVIKLLLNGERYPGLIMTIIRFVLPVQDHTIKKLLLIFWEI 81
Query: 81 IDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNL 140
+ KT G++L EMIL+C R +LQHPNE++RG TLRFLC+L E E++EPL+P++ L
Sbjct: 82 VPKTSGDGKLLQEMILVCDAYRKDLQHPNEFLRGSTLRFLCKLKEPELLEPLMPAIRACL 141
Query: 141 QHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLFTCDQ 200
HRH Y+RRNA+LA+ IYK + L+ D PE+I L T+QD S KRNAFLML DQ
Sbjct: 142 DHRHSYVRRNAVLAIFTIYK--NFDWLVPDGPELIANFLDTQQDMSCKRNAFLMLLHADQ 199
Query: 201 DRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNKGEKGKYIKIIISLLNAPSTAVIY 260
+RA+NYL + +D+V +G++LQ+V++ELI KVC N E+ ++I+ I +LLN+ S AV Y
Sbjct: 200 ERALNYLASCIDQVHSFGDILQLVIVELIYKVCHANPAERSRFIRCIYNLLNSSSNAVRY 259
Query: 261 ECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLDRLNELRSSH--RDIMVDLI 318
E AGTL++LS APTAI+AAA+ Y +L++ +SDNNVKLIVLDRL ++ + +M DL+
Sbjct: 260 ESAGTLITLSLAPTAIKAAASCYIELIVKESDNNVKLIVLDRLIAMKENENMEKVMQDLV 319
Query: 319 MDVLRALNSPNLDIRRKTLDIVLELITPRNINEVVLMLKKEVVKTQSGELEKNGEYRQML 378
MDVLR L +P++++RRK L + ++L+ RNI E+VL+LKKEV KT + E E G+YRQ+L
Sbjct: 320 MDVLRVLAAPDIEVRRKALALAMDLVYSRNIGEMVLVLKKEVAKTHNVEHEDTGKYRQLL 379
Query: 379 IQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREIIEMNPKLRVSIITRLL 438
++ +H+C+IKFP+VA+TV+ +L++FL D+N +A DV+IF+RE I+ P L II L+
Sbjct: 380 VRTLHTCSIKFPDVAATVIPVLVEFLSDTNELAAADVLIFIREAIQKFPALSGLIIEHLI 439
Query: 439 DNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCLGELPFFSVSEEGEDTDSSKK 498
+ F QI+++++ A+WI+GEY + +E I I+Q LG++P + D +++
Sbjct: 440 EAFPQIKSSKIHRAAVWILGEYVEGPQIIE-VIDAIQQTLGDVPMVEAEQRRLSGDPTEE 498
Query: 499 VQQQASSTTVSSRRPA--------------VLADGTYATQSAASETAFSPPTIVQGTLTS 544
QQ S T V +DGTYATQSA S +P V+
Sbjct: 499 QSQQQGSATGGVSGDGSSSTTTSTSNAINKVTSDGTYATQSAYS---LAPVAKVE---KR 552
Query: 545 GNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEVNKASSQALLIMVSMLQLGQSP 604
LR L+ GDFF+GA ++ TLTKL LR E+QP N+ +++ +LIM S+L LG+S
Sbjct: 553 PPLRQYLMDGDFFIGAALSATLTKLALRYVELQPDSSAQNRLTTRVMLIMSSILHLGKSG 612
Query: 605 VLPHPIDNDSFDRIVVCIRLLCNTGDNIRKIWLQSCRQSFVKMLSEKQLRESEELKAKAQ 664
PI ND DRI +C+R L +++ CR++ KML + + LK K +
Sbjct: 613 FPSKPITNDDTDRIFICLRTLSERTPEAVSVFMHYCREALGKMLDAQHDEDQRVLKEKQR 672
Query: 665 -ISHAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRA-----TGEFVKEGDDANKLNRI 718
+ QPDD + F L + + +QL E+ + L +A T + NKLN++
Sbjct: 673 ATAKVQPDDPVLFAQLSNGRD-NQLG-ENVFESSLNQALAGTKTAQLSDISSPNNKLNKV 730
Query: 719 LQLTGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVERPQNYT 778
QLTGFSDPVYAEAYV V+ YDIVLDV ++N+T +TLQN LELAT+GDLKLVERP
Sbjct: 731 TQLTGFSDPVYAEAYVNVNQYDIVLDVLIVNQTNDTLQNCTLELATLGDLKLVERPHPVV 790
Query: 779 LAPESSKQIKANIKVSSTETGVIFGNIVYETSNVLERTVVVLNDIHIDIMDYISPAVCTD 838
LAP IKAN+KVSSTE G+IFGNIVY+T+ L VVVLN IHIDIMDYI PA CTD
Sbjct: 791 LAPHDFCNIKANVKVSSTENGIIFGNIVYDTA--LNTNVVVLNTIHIDIMDYIIPASCTD 848
Query: 839 AAFRTMWAEFEWENKVAVNTVIQDEKEFLDHIIKSTNMKCLTAPSALDGDCGFLAANLYA 898
FR MW +FEWENKV VNT D E+L H++KSTNMKCLT AL G CGF+AAN+YA
Sbjct: 849 TEFRQMWQDFEWENKVTVNTSFTDLHEYLRHLLKSTNMKCLTPEKALSGQCGFMAANMYA 908
Query: 899 KSVFGEDALVNVSIEK---QTDGKLSGYIRIRSKTQGIALSLGDKITLKQK 946
KS+FGE+AL N+SIEK D K++G+IRIR+K+QG+ALSLGDKI+ QK
Sbjct: 909 KSIFGENALANLSIEKPVDDPDSKVTGHIRIRAKSQGMALSLGDKISSSQK 959
>sp|P45437|COPB_DROME Coatomer subunit beta OS=Drosophila melanogaster GN=betaCop PE=2
SV=2
Length = 964
Score = 904 bits (2336), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/952 (49%), Positives = 645/952 (67%), Gaps = 42/952 (4%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
++K LE D K++ +K+ I LLLNGE P L +TI+R+VLP ++HTI+KLLL++ EI
Sbjct: 23 QLKRDLEKGDTNVKIETLKRVIKLLLNGERYPGLIMTIIRFVLPVQNHTIKKLLLIFWEI 82
Query: 81 IDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNL 140
+ KT A G++L EMIL+C R +LQHPNE++RG TLRFLC+L E E++EPL+P++ L
Sbjct: 83 VPKTSADGKLLQEMILVCDAYRKDLQHPNEFLRGSTLRFLCKLKEPELLEPLMPAIRACL 142
Query: 141 QHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLFTCDQ 200
HRH Y+RRNA+LA+ IYK + L+ D PE+I L T+QD S KRNAFLML DQ
Sbjct: 143 DHRHSYVRRNAVLAIFTIYK--NFDWLVPDGPELIASFLDTQQDMSCKRNAFLMLLHADQ 200
Query: 201 DRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNKGEKGKYIKIIISLLNAPSTAVIY 260
+RA+NYL + +D+V +G++LQ+V++ELI KVC N E+ ++I+ I +LLN+ S AV Y
Sbjct: 201 ERALNYLASCIDQVHTFGDILQLVIVELIYKVCHANPAERSRFIRCIYNLLNSSSNAVRY 260
Query: 261 ECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLDRLNELRSSH--RDIMVDLI 318
E AGTL++LS APTAI+AAA+ Y +L++ +SDNNVKLIVLDRL ++ +M DL+
Sbjct: 261 ESAGTLITLSLAPTAIKAAASCYIELVVKESDNNVKLIVLDRLVAMKEHEGMEKVMQDLV 320
Query: 319 MDVLRALNSPNLDIRRKTLDIVLELITPRNINEVVLMLKKEVVKTQSGELEKNGEYRQML 378
MDVLR L +P++++RRKTL + L+L+ RNI E+VL+LKKEV KT + E E G+YRQ+L
Sbjct: 321 MDVLRVLAAPDIEVRRKTLALALDLVYSRNIGEMVLVLKKEVAKTHNVEHEDTGKYRQLL 380
Query: 379 IQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREIIEMNPKLRVSIITRLL 438
++ +H+C+IKFP+VA+ V+ +L++FL D+N +A DV+IF+RE I+ P LR II L+
Sbjct: 381 VRTLHTCSIKFPDVAANVIPVLVEFLSDTNELAAADVLIFIREAIQKFPALRALIIEHLI 440
Query: 439 DNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCLGELPFFSVSEE---GEDTDS 495
+ F QI+++++ A+WI+GEY + S++ IA I+Q LGE+P + G+ T+
Sbjct: 441 EAFPQIKSSKIHRAAVWILGEYVEG-SQILEVIAVIQQTLGEVPMVEAEQRRLAGDQTEE 499
Query: 496 SKKVQ------------QQASSTTVSSRRPAVLADGTYATQSAASETAFSPPTIVQGTLT 543
K+ Q + + S S++ V +DGTYATQSA S +P V
Sbjct: 500 QKQQQGSAGGNAAGSAAEGSGSGNASNK---VTSDGTYATQSAYS---LAP---VAKAEK 550
Query: 544 SGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEVNKASSQALLIMVSMLQLGQS 603
LR L+ GDFF+GA ++ TLTKL LR E++ N+ ++Q +LIM S+L LG+S
Sbjct: 551 RPPLRQYLMDGDFFIGAALSATLTKLALRYAELETEARAQNRLTTQVMLIMSSILHLGKS 610
Query: 604 PVLPHPIDNDSFDRIVVCIRLLCNTGDNIRKIWLQSCRQSFVKMLSEKQLRESEELKAKA 663
PI ND DRI VC+R L ++ CR++ KML + + LK K
Sbjct: 611 GFPSKPITNDDTDRIFVCLRTLSERTPEAISVFTLYCREALGKMLDAQHDEDQRMLKEKQ 670
Query: 664 Q-ISHAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRA-----TGEFVKEGDDANKLNR 717
+ + QPDD + F L + + +QL E+ + L +A + +KLN+
Sbjct: 671 KATAKVQPDDPVLFAQLSNGRD-NQLG-ENVFESSLNQALAGSKNAQLSDVASPNSKLNK 728
Query: 718 ILQLTGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVERPQNY 777
+ QLTGFSDPVYAEAYV V+ YDIVLDV ++N+T +TLQN LELAT+GDLKLVERP
Sbjct: 729 VTQLTGFSDPVYAEAYVNVNQYDIVLDVLIVNQTNDTLQNCTLELATLGDLKLVERPHPV 788
Query: 778 TLAPESSKQIKANIKVSSTETGVIFGNIVYETSNVLERTVVVLNDIHIDIMDYISPAVCT 837
LAP IKAN+KVSSTE G+IFGNIVYET+ L VVVLN IHIDIMDYI PA CT
Sbjct: 789 VLAPHDFCNIKANVKVSSTENGIIFGNIVYETA--LNTNVVVLNTIHIDIMDYIIPASCT 846
Query: 838 DAAFRTMWAEFEWENKVAVNTVIQDEKEFLDHIIKSTNMKCLTAPSALDGDCGFLAANLY 897
D FR MW +FEWENKV VNT D E+L H++KSTNMKCLT AL G CGF+AAN+Y
Sbjct: 847 DTEFRQMWQDFEWENKVTVNTSFTDLHEYLKHLLKSTNMKCLTPEKALSGQCGFMAANMY 906
Query: 898 AKSVFGEDALVNVSIEK---QTDGKLSGYIRIRSKTQGIALSLGDKITLKQK 946
AKS+FGE+AL N+SIEK D K++G+IRIR+K+QG+ALSLGDKI+ QK
Sbjct: 907 AKSIFGENALANLSIEKPVDDPDSKVTGHIRIRAKSQGMALSLGDKISSSQK 958
>sp|Q23924|COPB_DICDI Coatomer subunit beta OS=Dictyostelium discoideum GN=copb PE=2 SV=2
Length = 912
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/948 (45%), Positives = 625/948 (65%), Gaps = 59/948 (6%)
Query: 1 MEKSCTLLIHFDKGTPAIANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVR 60
+EK CT+LI++DKG P NE K+ E K++ +KK I+ +NGE +PQL + I+
Sbjct: 10 IEKPCTILINYDKGDPPQVNEFKQNFEHGTTEQKIETLKKVILYTINGEPIPQLLMPIIL 69
Query: 61 YVLPSEDHTIQKLLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFL 120
YV+PS DHTI+KLLL+Y E+I+KT G++ EMIL+C +L N+L HPNE++RG TLRFL
Sbjct: 70 YVMPSNDHTIKKLLLIYWEVIEKTHL-GKLKSEMILVCNSLLNDLNHPNEFVRGSTLRFL 128
Query: 121 CRLNETEIIEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLS 180
C+L E E++EPL+PSV NL++RH Y RRNA+LA+ IY + L+ DAPE+I L
Sbjct: 129 CKLREAEVLEPLVPSVRSNLENRHAYCRRNAVLAIYNIYS--HFDYLIPDAPELIYNFLL 186
Query: 181 TEQDPSAKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNKGEK 240
E+D S KRNAF+MLF C ++A+ YL + +D V +G++LQ +V+ELIRKVC+T+ E+
Sbjct: 187 QEKDASCKRNAFIMLFNCAPEKAVEYLSSVLDEVPSFGDMLQFIVVELIRKVCKTSPSER 246
Query: 241 GKYIKIIISLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVL 300
KYIK I +LLN+ S AV YE AGTL+SLSSAPTA+R AA+ Y LL ++SDNNVK+IVL
Sbjct: 247 SKYIKCIFTLLNSSSPAVKYESAGTLLSLSSAPTAVRGAASAYIDLLCNESDNNVKMIVL 306
Query: 301 DRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINEVVLMLKKEV 360
D+L E++ +H IM +L+MD+LRAL+SPN+DI +K L+IVL+ +TP+NI+E++L LKKE+
Sbjct: 307 DKLIEIKKNHSKIMEELVMDILRALSSPNIDICKKVLNIVLDSVTPKNIDEIILFLKKEI 366
Query: 361 VKTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVR 420
KTQS E +K EYR +LI+ IH ++K+PEV VV LLM++LGDS + SA+DV+IF+R
Sbjct: 367 NKTQSKEFDKGLEYRHILIRTIHVSSLKYPEVLGNVVPLLMEYLGDSYLPSAVDVVIFLR 426
Query: 421 EIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCLGE 480
E++E P LR II +L++N I+ ++V A+W+I EY L +++ + +I L E
Sbjct: 427 EVVETYPSLRELIIKKLIENLSSIKVSKVYRVAVWVIAEYVTCLEDLQYAMTSITNDLEE 486
Query: 481 LPFFSVSEEG-EDTDSSKKVQQQASSTTVSSRRPAVLADGTYATQSAASETAFSPPTIVQ 539
L +EE +T + K+++ +
Sbjct: 487 LLKPKQTEEVILETKAKVKIEKVS------------------------------------ 510
Query: 540 GTLTSGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEVNKASSQALLIMVSMLQ 599
++ L+ GD++L + ++ +LTKL R E++ + NK +Q ++I+ ++
Sbjct: 511 -------IQKLIADGDWYLASCISSSLTKLFFRAEQLNIDNADSNKLKAQVMMIISVLIN 563
Query: 600 LGQSPVLPHPIDNDSFDRIVVCIRLLCNTGDNIRKIWLQSCRQSFVKMLSEKQLRESEEL 659
L ++ + +++R++ CI++L ++ I+KIWLQ CR SF L +++SE
Sbjct: 564 LSKASQV--STSKSAYERMLSCIQVLIDSNATIKKIWLQDCRDSFANYLKYLLIKQSENK 621
Query: 660 KAKAQISHAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGEFVKEGDDANKLNRIL 719
K + +P+++I+ LKS+K ++ E DDL +A G + D N+ ++I
Sbjct: 622 KKTEKEVLVKPNNIINIRQLKSKKAFGPVDTE----DDLIKAVGNTGEANKDQNEYSKIS 677
Query: 720 QLTGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVERPQNYTL 779
QL+GFSDP+Y EAYV VH YDIVLD++V N+T +TLQN+ LEL T+GDLK+ ER +T+
Sbjct: 678 QLSGFSDPIYVEAYVRVHQYDIVLDISVFNQTNDTLQNVTLELVTLGDLKICERVPPFTM 737
Query: 780 APESSKQIKANIKVSSTETGVIFGNIVYE----TSNVLERTVVVLNDIHIDIMDYISPA- 834
AP KA+IKVSST+ GVI G I ++ S++ ++ V+LN++HID++DYI PA
Sbjct: 738 APREKTSAKASIKVSSTDNGVIMGTIAFDIAGSVSSMSDKNCVILNELHIDVIDYILPAN 797
Query: 835 -VCTDAAFRTMWAEFEWENKVAVNTVIQDEKEFLDHIIKSTNMKCLTAPSALDGDCGFLA 893
TD FR W EFEWENK+ VNT I D +++ HI K TNM LT L D G L+
Sbjct: 798 HQYTDVLFRNHWLEFEWENKIPVNTNITDLVKYVHHISKVTNMGILTPEVHLSNDTGILS 857
Query: 894 ANLYAKSVFGEDALVNVSIEKQTDGKLSGYIRIRSKTQGIALSLGDKI 941
ANL AKSVFGEDAL N+ IEKQ DGK+SGYIRIR+K Q IA++LG+KI
Sbjct: 858 ANLCAKSVFGEDALANICIEKQADGKISGYIRIRAKVQSIAVTLGEKI 905
>sp|Q9UUF7|COPB_SCHPO Coatomer subunit beta OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=sec26 PE=3 SV=1
Length = 940
Score = 695 bits (1793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/949 (39%), Positives = 598/949 (63%), Gaps = 27/949 (2%)
Query: 4 SCTLLIHFDKGTPAIANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVL 63
SC L+ D + +K +LE + K+ AMK + +++NG++LP + + ++R+V+
Sbjct: 2 SCWTLVQQDFLEAPSVDALKTSLESKNDYVKISAMKTILRVVINGDSLPSILMHVIRFVM 61
Query: 64 PSEDHTIQKLLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRL 123
PS + ++KLL Y E+ K + G + EMIL C + RN+LQHPNE+IRG TLRFLC+L
Sbjct: 62 PSRNKELKKLLYYYWEVCPKYNNDGTMKQEMILACNSFRNDLQHPNEFIRGATLRFLCKL 121
Query: 124 NETEIIEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLSTEQ 183
E E+++PLIP+V Q L+HRH Y+R+NAILAV +IY++ L+ DA + E L+ E
Sbjct: 122 KEPELLDPLIPTVRQCLEHRHAYVRKNAILAVFSIYQV--SNHLIPDAASLAEDFLAAES 179
Query: 184 DPSAKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNKG--EKG 241
+ + KRNA ++LFT D ++A +LL + +++ +V++E IRKV T EK
Sbjct: 180 EGTCKRNALIVLFTIDPEKAKAWLLANFEQIPSLNASSLLVIIEFIRKVVLTKADGLEKL 239
Query: 242 KYIKIIISLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLD 301
++ +++SL +++V++E A +++++ +++ AA+ L ++DNN KLI+LD
Sbjct: 240 RFQSLLVSLTATNNSSVVFEAATSVINVFPDAESLKLAASRLLALADREADNNAKLIMLD 299
Query: 302 RLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINEVVLMLKKEVV 361
R+++L + + I+ DLI DV+ L+S + D+ K + I++ L++ RN+ +++ +KE+
Sbjct: 300 RISQLAARDKSILEDLITDVIPFLSSSDFDVCEKAISIIMGLVSSRNVEDILNHFQKELT 359
Query: 362 KTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVRE 421
K+ +GE EK+ R+ L +AIHSCAI FP A+T + L+ + D SA V+ F++E
Sbjct: 360 KS-NGETEKDDGRRRALTKAIHSCAINFPHTAATAIQYLLSHISDFQSKSASSVLSFIKE 418
Query: 422 IIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCLGEL 481
++E P LR S IT+LL + ++RA ++ +WI GEYC + ++ +I+ LGE+
Sbjct: 419 VMEKFPDLRSSNITKLLLSLKELRAGKIFRGVIWIAGEYCLTEDDIRVAWKSIRASLGEV 478
Query: 482 PFFSVSEEGEDTDSSKKVQQQ----ASSTTVSSRRPAVLADGTYATQSAASETAFSPPTI 537
P + SEE D S + S+ +SR+ VL DGTYAT+SA + A S +
Sbjct: 479 PILA-SEEQLLKDVSNVPEDDLLIDISAPASTSRK--VLPDGTYATESAVTSEALSAARL 535
Query: 538 --VQGTLTSGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEVNKASSQALLIMV 595
V+ + LR+ +L+GD++L AV+A LTKLV+R + + +N ++A LIM
Sbjct: 536 EAVKAS-KKPPLRTQILSGDYYLAAVLASALTKLVMRFARLSFDKERLNALKAEACLIMT 594
Query: 596 SMLQLGQSPVLPHPIDNDSFDRIVVCIRLLCNTGD--NIRKIWLQSCRQSFVKMLSEKQL 653
S++++GQS + + ID+DS +RI+ CIR + + + + ++L R++F ++++
Sbjct: 595 SIIRVGQSKFVKYTIDDDSVERIMNCIRAIYSFEELPEFQTVFLDDMRKAFSSLVAQSDK 654
Query: 654 RESEELKAKAQISHAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGEFVKEGDDAN 713
R+ E Q D+L++ + Q + + D+ +AT + + D A+
Sbjct: 655 RQKEADLLVNGSDAVQADELLNIRQFQRVIEEKQ---DLNFESDIIQATNDGMVVEDLAS 711
Query: 714 KLNRILQLTGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVER 773
KL+ I+QL GF+DPVY EAYV + +DI+LD+ ++NRT TLQNL ++LAT+GDLK+VER
Sbjct: 712 KLDHIVQLAGFTDPVYCEAYVKIQQFDIILDILLVNRTDTTLQNLSVDLATLGDLKVVER 771
Query: 774 PQNYTLAPESSKQIKANIKVSSTETGVIFGNIVYETSNVLERTVVVLNDIHIDIMDYISP 833
P L P + K ++A +KVSSTE+ VIFGNIVY E +VVLN I ++I+DYI P
Sbjct: 772 PPPMNLGPHAFKSVQATVKVSSTESAVIFGNIVYGGKASDEDKIVVLNGIPVNIIDYIKP 831
Query: 834 AVCTDAAFRTMWAEFEWENKVAVNTVIQDEK----EFLDHIIKSTNMKCLTAPSALDGDC 889
A ++ FR+MW EFEWENKV +++ +E +FL I+K TNM CLT ++L GDC
Sbjct: 832 AFIPESQFRSMWTEFEWENKVDISS---NEDISLYDFLHKIMKKTNMNCLTPDASLRGDC 888
Query: 890 GFLAANLYAKSVFGEDALVNVSIEKQTDGKLSGYIRIRSKTQGIALSLG 938
GFL+ANLYA S+FGEDAL+++S+EK G +SG++RIRSKTQGIALSLG
Sbjct: 889 GFLSANLYACSIFGEDALMSLSVEKSVSGPISGHVRIRSKTQGIALSLG 937
>sp|P41810|COPB_YEAST Coatomer subunit beta OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SEC26 PE=1 SV=2
Length = 973
Score = 671 bits (1730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/951 (38%), Positives = 583/951 (61%), Gaps = 35/951 (3%)
Query: 19 ANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYL 78
+ + ++ALE K+D MK ++ +L G +P+L + I+R+V+PS++ ++KLL Y
Sbjct: 25 STDFQKALEKGSDEQKIDTMKSILVTMLEGNPMPELLMHIIRFVMPSKNKELKKLLYFYW 84
Query: 79 EIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQ 138
EI+ K G++ EMIL+C ++++LQHPNEYIRG TLRFL +L E E++E ++PSVL
Sbjct: 85 EIVPKLAEDGKLRHEMILVCNAIQHDLQHPNEYIRGNTLRFLTKLREAELLEQMVPSVLA 144
Query: 139 NLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLFTC 198
L++RH Y+R+ AILAV +I+K+ E LL DA E+I + E DP KRNAF+ L
Sbjct: 145 CLEYRHAYVRKYAILAVFSIFKV--SEHLLPDAKEIINSFIVAETDPICKRNAFIGLAEL 202
Query: 199 DQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNKGEKGKYIKIIISLLNAP-STA 257
D++ A++YL ++ + LLQ V ++ IR+ K +YI++++ LL+ S
Sbjct: 203 DRENALHYLENNIADIENLDPLLQAVFVQFIRQDANRTPALKAQYIELLMELLSTTTSDE 262
Query: 258 VIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLDRLNELRSSHRDIMVDL 317
VI+E A L LS+ P + A N L + SDNN+KLIVLDR+ ++ +++ + +L
Sbjct: 263 VIFETALALTVLSANPNVLVPAVNKLIDLAVKVSDNNIKLIVLDRIQDINANNVGALEEL 322
Query: 318 IMDVLRALNSPNLDIRRKTLDIVLELITPRNINEVVLMLKKEVVKT-QSGELEKNGEYRQ 376
+D+LR LN+ +LD+R K LDI ++L T RN +VV +LKKE+ T + + +K +YRQ
Sbjct: 323 TLDILRVLNAEDLDVRSKALDISMDLATSRNAEDVVQLLKKELQTTVNNPDQDKAMQYRQ 382
Query: 377 MLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREIIEMNPKLRVSIITR 436
+LI+ I + A+ F E+A++VV LL+DF+GD N +A +I F++E+IE P+LR +I+
Sbjct: 383 LLIKTIRTVAVNFVEMAASVVSLLLDFIGDLNSVAASGIIAFIKEVIEKYPQLRANILEN 442
Query: 437 LLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCLGELPFFSVSEEGEDTDSS 496
++ ++R+A+ ALWI+GEY + SE+++ I+ +GE+P SE + T +
Sbjct: 443 MVQTLDKVRSAKAYRGALWIMGEYAEGESEIQHCWKHIRNSVGEVPILQ-SEIKKLTQNQ 501
Query: 497 KKVQQQASSTTVSSRRPAVLADGTYATQSAASETAFSPPTIVQGTLTSGNLRSLLLTGDF 556
+ ++ T P +L DGTYAT+SA + + +R +L+GDF
Sbjct: 502 EHTEENEVDATAKPTGPVILPDGTYATESAFDVKTSQKSVTDEERDSRPPIRRFVLSGDF 561
Query: 557 FLGAVVACTLTKLVLRLEEVQPSRVEVNKASSQALLIMVSMLQLGQSPVLPHPIDNDSFD 616
+ A++A T+ KLVL+ E V ++ +N ++ALLI+VS++++GQS ++ ID DS +
Sbjct: 562 YTAAILANTIIKLVLKFENVSKNKTVINALKAEALLILVSIVRVGQSSLVEKKIDEDSLE 621
Query: 617 RIVVCIRLLCNTGDNIRK---------IWLQSCRQSFVKMLSEKQLRESEELKAKAQISH 667
R++ I +L + + K +L + + SF + + E + + K +
Sbjct: 622 RVMTSISILLDEVNPEEKKEEVKLLEVAFLDTTKSSFKRQI-EIAKKNKHKRALKDSCKN 680
Query: 668 AQP-DDLIDFYHLKSRKGMSQLELE-DEVQDDLKRATGEFVKEGDDAN--------KLNR 717
+P D I F G+ ++ D +++DL+ A +GD + KL +
Sbjct: 681 IEPIDTPISFRQFA---GVDSTNVQKDSIEEDLQLAM-----KGDAIHATSSSSISKLKK 732
Query: 718 ILQLTGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVERPQNY 777
I+ L GFSDPVYAEA +T + +D+VLDV ++N+TKETL+NL ++ AT+GDLK+++ PQ
Sbjct: 733 IVPLCGFSDPVYAEACITNNQFDVVLDVLLVNQTKETLKNLHVQFATLGDLKIIDTPQKT 792
Query: 778 TLAPESSKQIKANIKVSSTETGVIFGNIVYETSNVLERTVVVLNDIHIDIMDYISPAVCT 837
+ P + +KVSS +TGVIFGNI+Y+ ++ + V+LND+H+DIMDYI PA
Sbjct: 793 NVIPHGFHKFTVTVKVSSADTGVIFGNIIYDGAHGEDARYVILNDVHVDIMDYIKPATAD 852
Query: 838 DAAFRTMWAEFEWENKVAVNTVIQDEKEFLDHIIKSTNMKCLTAPSAL-DGDCGFLAANL 896
D FRTMW FEWENK++V + + +L ++K TNM LT +L + DC FL+ NL
Sbjct: 853 DEHFRTMWNAFEWENKISVKSQLPTLHAYLRELVKGTNMGILTPSESLGEDDCRFLSCNL 912
Query: 897 YAKSVFGEDALVNVSIEKQTD-GKLSGYIRIRSKTQGIALSLGDKITLKQK 946
YAKS FGEDAL N+ IEK + + GY+RIRSK QG+ALSLGD++ L K
Sbjct: 913 YAKSSFGEDALANLCIEKDSKTNDVIGYVRIRSKGQGLALSLGDRVALIAK 963
>sp|Q6FM46|COPB_CANGA Coatomer subunit beta OS=Candida glabrata (strain ATCC 2001 / CBS
138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SEC26 PE=3
SV=1
Length = 972
Score = 658 bits (1698), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/960 (38%), Positives = 575/960 (59%), Gaps = 44/960 (4%)
Query: 14 GTPAIANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKL 73
TP E ++ALE K++AMK+ ++ +L G LP++ + I+R+V+PS++ ++KL
Sbjct: 20 STPNTVAEFQKALEKGSDETKIEAMKEILVTMLEGNPLPEMLMHIIRFVMPSKNKKLKKL 79
Query: 74 LLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLI 133
L Y EI+ K D G++ EMIL+C ++++LQHPNE+IRG TLRFL +L E E++E ++
Sbjct: 80 LYFYWEIVPKLDQDGKLRHEMILVCNAIQHDLQHPNEFIRGNTLRFLTKLREPELLEQMV 139
Query: 134 PSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLSTEQDPSAKRNAFL 193
PS L L++RH Y+R+ AILAV++IYK+ E LL DA E+I L E DP KRNAFL
Sbjct: 140 PSTLACLEYRHAYVRKYAILAVLSIYKV--SEHLLPDAKEIINTFLLAETDPICKRNAFL 197
Query: 194 MLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNKGEKGKYIKIIISLL-N 252
L D+D A+ YL ++D + LLQ ++ IRK K +Y +++ LL +
Sbjct: 198 GLSELDRDNALQYLQDNIDDIESLDPLLQAAFVQFIRKDAIQTPALKSQYCDLLLELLAS 257
Query: 253 APSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLDRLNELRSSHRD 312
A + V++E A L LS T + A + L + SDNNVK+IVLDR+ ++ +
Sbjct: 258 ATADEVVFETALALTILSGNQTVLIKAVSKMIDLAVKVSDNNVKIIVLDRIQDINERNPG 317
Query: 313 IMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINEVVLMLKKEVVKTQ-SGELEKN 371
+ +L +D+LR LN+ ++D+R K L I ++L+T RNI +VV +LKKE+ T + E EK+
Sbjct: 318 CLEELTLDILRVLNAEDIDVRSKALTIAMDLVTSRNIEDVVQLLKKELQTTVINNEKEKS 377
Query: 372 GEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREIIEMNPKLRV 431
+YR +LI+ I A++F E+A+ +V LL+DF+ D N +A VI FV++++E+ P+LR
Sbjct: 378 SDYRSLLIKTIRGIAVRFEEIAANIVSLLLDFITDLNSVAANGVIAFVKDVVELYPQLRS 437
Query: 432 SIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCLGELPFFSV----- 486
+I+ L+ + +A+ ALWI+GEY + SE+++ I+Q +GE+P
Sbjct: 438 NILENLIAKLESVNSAKAYRGALWILGEYSTTESEIQDSWKHIRQSIGEIPILQTELKNQ 497
Query: 487 --SEEGEDTDSSKKVQQQASSTTVSSRRPAVLADGTYATQSAASETAFSPPTIVQGTLTS 544
S++ +D + + +QA P +L DGTYAT++A + +
Sbjct: 498 RKSQDEDDEATEESATKQAG--------PVILPDGTYATENAFGSSNNDNKKKLVENENR 549
Query: 545 GNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVEVNKASSQALLIMVSMLQLGQSP 604
LR +L GDF+ +++A T+ KLVLR E+V +N ++ LL++VS++++G+S
Sbjct: 550 PPLRRFVLGGDFYTASILASTIVKLVLRFEKVSERAAVLNALKAEGLLMLVSIIRVGESS 609
Query: 605 VLPHPIDNDSFDRIVVCIRLLCNTGDN---------IRKIWLQSCRQSF----VKMLSEK 651
++ ID DS +RI I +L + + + +L + + SF V K
Sbjct: 610 IVEKNIDEDSQERITTAIAILMDESNPDESSAERELLNIAFLDATKASFKGQFVAQKKTK 669
Query: 652 QLRESEELKAKAQISHAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRAT-GEFVKEGD 710
+ S K K I D + F L+ + D + +DL+ A G+ ++
Sbjct: 670 LFKSSPVRKHKEAI-----DQSVSFRLLQENDNTAVSG--DAIDEDLQLAIRGDAARDTS 722
Query: 711 DA--NKLNRILQLTGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDL 768
+KL +I+ LTGFSDPVYAEA +T + +D+VLDV ++N+TKETL+N ++ AT+GDL
Sbjct: 723 SIAISKLKKIVPLTGFSDPVYAEACITTNQFDVVLDVLLVNQTKETLKNFHVQFATLGDL 782
Query: 769 KLVERPQNYTLAPESSKQIKANIKVSSTETGVIFGNIVYETSNVLERTVVVLNDIHIDIM 828
K+VE P + P ++ +KVSS +TGVIFGNI+Y+ + + V+LND+H+D+M
Sbjct: 783 KIVENPPATNVVPHGFHRVSVTVKVSSADTGVIFGNIIYDGGHGQDARYVILNDVHVDLM 842
Query: 829 DYISPAVCTDAAFRTMWAEFEWENKVAVNTVIQDEKEFLDHIIKSTNMKCLTAPSAL-DG 887
DYI PA D +FRTMW FEWENK++V + + +LD +IK TNM LT +L +
Sbjct: 843 DYIKPAKTDDESFRTMWNAFEWENKISVKSKLPSLHAYLDELIKGTNMGVLTPVESLGEK 902
Query: 888 DCGFLAANLYAKSVFGEDALVNVSIEKQTDG-KLSGYIRIRSKTQGIALSLGDKITLKQK 946
DC FL NLYA+S FGEDAL N+ IE + ++ GY+RIRSK QG+ALSLGD++ L K
Sbjct: 903 DCRFLCCNLYARSSFGEDALANLCIELDPNTEQVVGYVRIRSKGQGLALSLGDRVALIAK 962
>sp|Q9U4N3|COPB_TOXGO Coatomer subunit beta OS=Toxoplasma gondii PE=2 SV=2
Length = 1103
Score = 607 bits (1564), Expect = e-172, Method: Compositional matrix adjust.
Identities = 379/1108 (34%), Positives = 594/1108 (53%), Gaps = 171/1108 (15%)
Query: 1 MEKSCTLLIHFDKGTPAIANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVR 60
+E++C L I+ +G E+++ +E + K + M+ I+ + GE +L +T++R
Sbjct: 3 LERNCMLYIYSSRGDAPSTAELQKKIESPNEATKAEGMQDLIIGMTQGEAYTRLLMTVIR 62
Query: 61 YVLPSEDHTIQKLLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFL 120
Y +PS+D ++KL LYLEI+ K G + EMILIC LRN+L PNEY+RG TLR L
Sbjct: 63 YAMPSKDKRVKKLTQLYLEIVGKCRPDGSLKEEMILICNALRNDLMSPNEYVRGSTLRLL 122
Query: 121 CRLNETEIIEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLS 180
++ + +++EPL+ ++LQNL HRH Y+RRNA++ V +I K G + + IE++L
Sbjct: 123 SKIRQFKVLEPLVEAILQNLTHRHSYVRRNAVMCVYSIVK-NFGLDAIPATIDQIEQMLL 181
Query: 181 TEQDPSAKRNAFLMLFTCDQDRAINYLLTHV--DRVSEWGELLQ------MVVLELIRKV 232
+E D + KRNAFL+L C RAI ++L D G LL + +LEL+RKV
Sbjct: 182 SEGDLTTKRNAFLVLVHCASKRAIQFILQQRSEDGTGGLGFLLSSGDLFQLALLELLRKV 241
Query: 233 CRTNKGEKGKYIKIIISLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSD 292
CR + +K +++I+S+L +V YE A +L++LS AP +++AAA ++ LL SD
Sbjct: 242 CRQKQQQKAGLLRLIVSILPNTLPSVAYEGACSLLALSRAPVSLKAAAGAFASLLCGNSD 301
Query: 293 NNVKLIVLDRLNE-LRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINE 351
NNVKLIVLDRL E ++ + R M + ++D+LR L +P+L++RRK LD+VL+++ ++ +
Sbjct: 302 NNVKLIVLDRLQECVQRASRRTMEEFVIDLLRGLQTPSLEVRRKILDLVLQIVGKNSVEQ 361
Query: 352 VVLMLKKEVVKTQSGE---LEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSN 408
++ +LK+E+++T E + + EYR++LI+A+HSC +FPE A++VV++L+DF GD +
Sbjct: 362 LLNVLKRELLRTAEPEQLTVPRTMEYRRLLIKAVHSCCTRFPEAAASVVNVLIDFPGDPD 421
Query: 409 VASAIDVIIFVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVE 468
V +A +V + VRE++ LR II+R++D F ARV +LW++GE+C+ ++
Sbjct: 422 VTTATEVAVVVRELVATCVHLRSRIISRVVDAFPDSAHARVLRVSLWMLGEFCEDSELLD 481
Query: 469 NGIATIKQCLGELPFFSVSEEGEDTDSSKKVQQQASSTTVSSRRPAVLADGTYATQSAAS 528
+ + + LPF S G + + Q + TT R VL DGTY T+
Sbjct: 482 SFLTAVYAACSPLPFTSGDSGGAEGEQRSGCQPKLKMTT----RTVVLEDGTYGTEDVYE 537
Query: 529 ETAFSPPTIVQGTLTSGNLRSLLLTGDFFLGAVVACTLTKLVLRL---------EEVQPS 579
+ + T+ LR +L GDF L + VA T KL+L+ EE +
Sbjct: 538 SVNEKGDSSAKAGKTA--LRKFILGGDFLLASTVAVTCAKLILKTSDEVHAQLAEEFERH 595
Query: 580 RVEVNKASSQALLI----------------------------------------MVSMLQ 599
R V + + + L ++ L+
Sbjct: 596 REAVQEKAGRRTLTGDAQARETLLERQELEGKVAPVKLRASTEQKTRVLYLVACLLKFLR 655
Query: 600 LGQSPVLPHPIDNDSFDRIVVCIRLLCNTGDNIRK------IWLQSCRQSFVKMLSEKQL 653
L S H +D+ R+ +R LC + K W+ R + ++L+ +
Sbjct: 656 LSSSGAGAH---SDAAIRVCQSLRALCGLMTGLEKEKAFVRHWVHHGRFALERVLALGPV 712
Query: 654 RE---SEELK-AKAQISHAQPDDLIDFYHLKSRK-------------------------- 683
+ + LK A+ + + + PDDL F L+ +
Sbjct: 713 SDDPFTWNLKDAEDEKTVSAPDDLAFFRQLRPDRQSLMVASEGVAAVGEDSLEEDEIYYS 772
Query: 684 ---GMS---QLELEDEVQDDLKRATG---------EFVKEGDDA----NKLNRILQLTGF 724
G++ +LE DE + DL+ G DDA +L ++ +TG
Sbjct: 773 ACAGLARGAELEEVDETEADLQLTVGGAGGTSPSLSGGNAKDDAALFQQRLAKVQPITGQ 832
Query: 725 SDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVERPQNYTLAPESS 784
+DP+Y EA++ V+ +D+++++ V+NRT+++LQN+ +E +T GDLKLVERP +LAP
Sbjct: 833 ADPLYVEAFLQVNQFDLLVEMLVVNRTQDSLQNVTVEPSTHGDLKLVERPAPVSLAPGQQ 892
Query: 785 KQIKANIKVSSTETGVIFGNIVYETSNVLERTVVVLNDIHIDIMDYISPAVCTDAAFRTM 844
+ A IKV STE G+I G + + ++ +VLN++HID++DYI + AFR+M
Sbjct: 893 AVLHAPIKVRSTEAGIILGYVTFSRRGSSDKECLVLNELHIDVLDYIERRWTCELAFRSM 952
Query: 845 WAEFEWENKVAVNTVIQDEKEFLDHIIKSTN---------------MKCLTAPSALD--- 886
WAEFEWENK+ VNT D EFL+H++K TN +K A + LD
Sbjct: 953 WAEFEWENKIHVNTSFTDVSEFLEHLMKMTNLTVVGFRPPASVMRRLKFSAACAGLDEAE 1012
Query: 887 ---GD------------------------CGFLAANLYAKSVFGEDALVNVSIEKQTDGK 919
GD F A NLY++S+FGEDALVNVSIEK GK
Sbjct: 1013 RAAGDGEEDEDRYLQSVRKIPTLRKLSESSSFFAVNLYSRSIFGEDALVNVSIEKLPGGK 1072
Query: 920 LSGYIRIRSKTQGIALSLGDKITLKQKG 947
L+G IRIRS+TQGIALSLGD+IT+ Q+G
Sbjct: 1073 LAGSIRIRSRTQGIALSLGDRITVVQRG 1100
>sp|Q9NFU6|COPB_TRYBB Coatomer subunit beta OS=Trypanosoma brucei brucei PE=3 SV=1
Length = 982
Score = 572 bits (1473), Expect = e-162, Method: Compositional matrix adjust.
Identities = 340/987 (34%), Positives = 564/987 (57%), Gaps = 62/987 (6%)
Query: 2 EKSCTLLIHFDKGTPAIANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRY 61
E C+ L+ G P + E+K ALE D+ A+ A++ I + LNGE + +T++++
Sbjct: 6 EGFCSFLVGL-SGAPVNSKELKSALEKGDMKARASALEALIRMHLNGEPQNHMIMTVIKF 64
Query: 62 VLPSEDHTIQKLLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLC 121
+ P +DH I+KL+L + E++DKTDA G++L EMILIC LR +L HPNEYIRG+ LRF+C
Sbjct: 65 ITPLDDHYIKKLVLYFWEVVDKTDASGKLLSEMILICSFLREDLLHPNEYIRGLALRFMC 124
Query: 122 RLNETEIIEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLST 181
++ E E++EPL+ SV+QNL HR Y+RRNA+LAV I+K + +LL DA E++EK +S
Sbjct: 125 KVKERELVEPLVSSVVQNLTHRVTYVRRNAVLAVHRIFK--RFPELLPDAAELVEKFISE 182
Query: 182 EQDPSAKRNAFLMLFTCDQDRAINYL--LTHVDRVSEWGELLQMVVLELIRKVCRTNKGE 239
E D SA RNAF ML C DR + +L L + G LQM +++ + R N +
Sbjct: 183 ENDVSASRNAFEMLVECSPDRVVKFLAELRESKNLESLGATLQMSIVDFAGHMIRANPYD 242
Query: 240 KGKYIKIIISLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIV 299
KG+Y+ ++ S+L + + AV Y+CA TL+S+S++PTAIR AA T+ LL + +D +V+LIV
Sbjct: 243 KGRYVTVLFSILQSNNPAVRYQCASTLLSISTSPTAIRQAALTFIDLLKTHTDISVRLIV 302
Query: 300 LDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINEVVLMLKKE 359
+D+L+ +R I+ D ++D+L L + ++IR++ + + +EL++ +N V +KKE
Sbjct: 303 VDQLDAMRERFSKILQDSLLDILSVLANGTMEIRKRIVTLGVELVSNQNSEVFVQAIKKE 362
Query: 360 V--VKTQSGELEKNG--EYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDV 415
+ VK + +K EY+++LI+A + + P +AS V+ L++++L + + S +V
Sbjct: 363 LYWVKNECDVDDKESLLEYKKLLIRATRTAVARRPHMASAVIPLVLEYLYEED-DSGFEV 421
Query: 416 IIFVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIK 475
+ +RE++++ P LR + +L IR V LW++G + S + I +
Sbjct: 422 VSLIREVLQLQPSLRSETLRQLRQTLRMIRCPSVIRTVLWLLGTHVTSADDALEVIRLLI 481
Query: 476 QCLGELPFFSVSEE----GEDTDSSKKVQQQA--SSTTVSSRRPAVLADGTYATQSAASE 529
L LP +E ED D K QQ+ TT+ V DGTY S S
Sbjct: 482 NTLEPLPLEPTVKEQMKQQEDFDGHKGGQQKPRMQMTTI------VQEDGTYVMSSVPSN 535
Query: 530 TAFSPPTIVQGTLTSGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSRVE---VNKA 586
+G ++ LR +L G FF+ A +A TL+KL++RL S V+ + +A
Sbjct: 536 KTQED---AEGNDSNCGLRGVLTGGKFFIAAPLASTLSKLIIRLFNHHSSGVDESTMKEA 592
Query: 587 SSQALLIMVSMLQLGQSPVLPHPIDNDSFDRIVVCIRLLCNTGDNIRKIWLQSCRQSFVK 646
+ A++++ +L+ ID+ + ++I + + + N + +++ ++
Sbjct: 593 QNSAIMLLNEVLRFCTMDGAAGMIDDATHEQIRLALLNITNPRSPLLATFVEDSSKALDS 652
Query: 647 MLS-----------EKQLRESEELKAKA-----QISHAQPDDLIDFYHLKSRKGMSQLEL 690
+ + + R ++ + + Q++ D + F + KG S LEL
Sbjct: 653 LTNKVGSIAGGDGFDFNKRNNDNVVGRTSFDEQQVALCSVDTPVMFTQIMEGKG-SLLEL 711
Query: 691 EDEVQDDLKR--ATGEFVKEGDDANKLNRILQLTGFSDPVYAEAYVTVHHYDIVLDVTVI 748
E DDL A K + KL + + L+GF DP+Y EA VTVH +DI +D +
Sbjct: 712 --EAVDDLGSVVANASIEKTEEFLIKLEKTVPLSGFCDPLYCEASVTVHQFDITVDWYIA 769
Query: 749 NRTKETLQNLCLELATMGDLKLVERPQNYTLAPESSKQIKANIKVSSTETGVIFGNIVYE 808
N T L+++ +EL +G +KL ERPQ +T+ P S +I+ +KV S ETGVI +++YE
Sbjct: 770 NCTANVLRDVSIELTPLGSMKLCERPQVHTIQPHGSVRIRTALKVGSPETGVICASVLYE 829
Query: 809 TSNVLERTVVVLNDIHIDIMDYISPAVCTDAAFRTMWAEFEWENKVAVNTVIQDEKEFLD 868
ER VVLN++ +DIM+Y+ PA C+ + FR W +++WEN VA+ T D +E+++
Sbjct: 830 GPQN-ERGCVVLNNVRVDIMNYVRPAKCSASEFRDKWCKYDWENAVAIRTEKTDMREYVE 888
Query: 869 HIIKSTNMKCL--------TAPSALD--GDCG--FLAANLYAKSVFGEDALVNVSIEKQT 916
++++ TN + L SA D GD G +++ N+YA+++FG+DAL+NVSIE+
Sbjct: 889 YVMQGTNTRLLEPYPEEDDEVVSAFDGKGDNGHRYVSCNMYARTLFGDDALLNVSIERDA 948
Query: 917 DGKLSGYIRIRSKTQGIALSLGDKITL 943
+GKLSG +R+R+ + +A G+K+ +
Sbjct: 949 EGKLSGMVRVRANKRPVAYGFGEKLNI 975
>sp|O81742|APBLC_ARATH Beta-adaptin-like protein C OS=Arabidopsis thaliana GN=BETAC-AD
PE=1 SV=2
Length = 893
Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 102/481 (21%), Positives = 211/481 (43%), Gaps = 41/481 (8%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
E+KE L + DA+KK I + G+ + LF +V + +E+ ++KL+ LYL
Sbjct: 19 ELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVN-CMQTENLELKKLVYLYLIN 77
Query: 81 IDKTDAKGRVLPEM-ILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
K+ P++ IL + Q PN IR + +R + + +I E L + +
Sbjct: 78 YAKSQ------PDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYLCDPLQKC 131
Query: 140 LQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIE--KVLSTEQDP-----------S 186
L+ PY+R+ A + V ++ + LV+ +E K L ++ +P
Sbjct: 132 LKDDDPYVRKTAAICVAKLFDI---NAELVEDRGFLEALKDLISDNNPMVVANAVAALAE 188
Query: 187 AKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNKGEKGKYIKI 246
+ N+ +F + + LLT ++ +EWG Q+ +L+ + + ++ E ++
Sbjct: 189 IQENSTSPIFEINS-TILTKLLTALNECTEWG---QVFILDALSRYKASDPREAENIVER 244
Query: 247 IISLLNAPSTAVIYECAGTLVS---LSSAPTAIRAAANTYSQLLLS--QSDNNVKLIVLD 301
+ L + AV+ ++ L ++ IR + L++ ++ ++ + L
Sbjct: 245 VTPRLQHANCAVVLSAVKMILQQMELITSTDVIRNLCKKMAPPLVTLLSAEPEIQYVALR 304
Query: 302 RLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINEVVLMLKKEVV 361
+N + I+ I N P + ++ + L+I+++L + RNI++V+L K+
Sbjct: 305 NINLIVQKRPTILAHEIKVFFCKYNDP-IYVKMEKLEIMIKLASDRNIDQVLLEFKEYAT 363
Query: 362 KTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVRE 421
E + ++ + ++AI CAIK A + +L++ + + II +++
Sbjct: 364 -------EVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKD 416
Query: 422 IIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCLGEL 481
I P SII L ++ + +WIIGEY + + + + + + E
Sbjct: 417 IFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNADELLESFLENFPEE 476
Query: 482 P 482
P
Sbjct: 477 P 477
>sp|Q9Z1T1|AP3B1_MOUSE AP-3 complex subunit beta-1 OS=Mus musculus GN=Ap3b1 PE=1 SV=2
Length = 1105
Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 116/497 (23%), Positives = 219/497 (44%), Gaps = 78/497 (15%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
++K+ LE N AK+DAMK+ + ++ G+ +LF +V+ V S++ I+KL+ +YL
Sbjct: 46 DLKQMLESNKDSAKLDAMKRIVGMIAKGKNASELFPAVVKNVA-SKNIEIKKLVYVYL-- 102
Query: 81 IDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNL 140
+ + + + +L + L+ PN+ IR LR L + I+ ++ ++ +
Sbjct: 103 VRYAEEQQDL---ALLSISTFQRALKDPNQLIRASALRVLSSIRVPIIVPVMMLAIKEAS 159
Query: 141 QHRHPYIRRNAILAVMAIYKL-PQGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLF--T 197
PY+R+NA A+ +Y L P+ +++L+ E+IEK+L + A + +M F
Sbjct: 160 ADLSPYVRKNAAHAIQKLYSLDPEQKEMLI---EVIEKLLKDKSTLVA--GSVVMAFEEV 214
Query: 198 CDQ-----DRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTN------------KGEK 240
C R L + V EWG Q+V++ ++ + RT EK
Sbjct: 215 CPDRIDLIHRNYRKLCNLLVDVEEWG---QVVIIHMLTRYARTQFVSPWREDGGLEDNEK 271
Query: 241 GKY---------------------------IKIIISLLNAPSTAVIYECAGTLVSLSSAP 273
Y I+ LL + + AV+ A +S P
Sbjct: 272 NFYESEEEEEEKEKSSRKKSYAMDPDHRLLIRNTKPLLQSRNAAVVMAVAQLYWHIS--P 329
Query: 274 TAIRAAANTYSQLLLSQSDNNVKLIVLDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIR 333
+ A + S + L +S+ V+ IVL + + S R M + + ++ I+
Sbjct: 330 KS-EAGVISKSLVRLLRSNREVQYIVLQNIATM-SIERKGMFEPYLKSFYVRSTDPTMIK 387
Query: 334 RKTLDIVLELITPRNINEVVLMLKKEVVKTQSGELEKNGEYRQMLIQAIHSCAIKFPEVA 393
L+I+ L NI+ +L + V++Q + ++ IQ I CA EV
Sbjct: 388 TLKLEILTNLANEANIS-TLLREFQTYVRSQ------DKQFAAATIQTIGRCATSISEVT 440
Query: 394 STVVHLLMDFLGDSNVASAIDVIIFVREIIEMNPKLRVSII---TRLLDNFYQIRAARVC 450
T ++ L+ L + + + ++ ++++++M P II +LLD+ + AR
Sbjct: 441 DTCLNGLVCLLSNRDEIVVAESVVVIKKLLQMQPAQHGEIIRHMAKLLDSI-TVPVARAS 499
Query: 451 TCALWIIGEYCQSLSEV 467
LW+IGE C+ + ++
Sbjct: 500 I--LWLIGENCERVPKI 514
>sp|Q32PG1|AP3B1_BOVIN AP-3 complex subunit beta-1 OS=Bos taurus GN=AP3B1 PE=2 SV=1
Length = 1084
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 120/497 (24%), Positives = 223/497 (44%), Gaps = 79/497 (15%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
++K+ LE N AK+DAMK+ + ++ G+ +LF +V+ V S++ I+KL+ +YL
Sbjct: 46 DLKQMLESNKDSAKLDAMKRIVGMIAKGKNASELFPAVVKNV-ASKNIEIKKLVYVYL-- 102
Query: 81 IDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNL 140
+ + + + +L + L+ PN+ IR LR L + I+ ++ ++ +
Sbjct: 103 VRYAEEQQDL---ALLSISTFQRALKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAS 159
Query: 141 QHRHPYIRRNAILAVMAIYKL-PQGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLF--T 197
PY+R+NA A+ +Y L P+ +++L+ E+IEK+L + A + +M F
Sbjct: 160 ADLSPYVRKNAAHAIQKLYSLDPEQKEMLI---EIIEKLLKDKSTLVA--GSVVMAFEEV 214
Query: 198 CDQDR----AINY--LLTHVDRVSEWGELLQMVVLELIRKVCRTN--------------- 236
C DR NY L + V EWG Q+V++ ++ + RT
Sbjct: 215 C-PDRIDLIHKNYRKLCNLLVDVEEWG---QVVIIHMLTRYARTQFVSPWRQGDVLEDNE 270
Query: 237 ------------KGEKGK-----------YIKIIISLLNAPSTAVIYECAGTLVSLSSAP 273
K +K K I+ LL + + AV+ A + AP
Sbjct: 271 KDFYDSDEEQKEKADKRKRPYAMDPDHRLLIRNTKPLLQSRNAAVVMAVAQLYWHI--AP 328
Query: 274 TAIRAAANTYSQLLLSQSDNNVKLIVLDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIR 333
+ A + S + L +S V+ IVL + + S R M + + ++ I+
Sbjct: 329 KS-EAGIISKSLVRLLRSSREVQYIVLQNIATM-SIQRKGMFEPYLKSFYVRSTDATMIK 386
Query: 334 RKTLDIVLELITPRNINEVVLMLKKEVVKTQSGELEKNGEYRQMLIQAIHSCAIKFPEVA 393
L+I+ L NI+ +L + VK+Q + ++ IQ I CA EV+
Sbjct: 387 ILKLEILTNLANEANIS-TLLREFQTYVKSQ------DKQFAAATIQTIGRCATSITEVS 439
Query: 394 STVVHLLMDFLGDSNVASAIDVIIFVREIIEMNPKLRVSII---TRLLDNFYQIRAARVC 450
T ++ L+ L + + + ++ ++++++M P II +LLD+ + AR
Sbjct: 440 DTCLNGLVCLLSNRDEIVVAESVVVIKKLLQMQPMQHGEIIKHMAKLLDSI-TVPVARAS 498
Query: 451 TCALWIIGEYCQSLSEV 467
LW+IGE C+ + ++
Sbjct: 499 I--LWLIGENCERVPKI 513
>sp|P63009|AP2B1_BOVIN AP-2 complex subunit beta OS=Bos taurus GN=AP2B1 PE=1 SV=2
Length = 937
Score = 84.0 bits (206), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 102/471 (21%), Positives = 202/471 (42%), Gaps = 47/471 (9%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
E+K L + +A+KK I + G+ + LF +V + +++ ++KL+ LYL
Sbjct: 17 ELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVN-CMQTDNLELKKLVYLYLMN 75
Query: 81 IDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
K+ P+M ++ N + + PN IR + +R + + +I E L + +
Sbjct: 76 YAKSQ------PDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKC 129
Query: 140 LQHRHPYIRRNAILAVMAIYKL------PQG-----EQLLVDAPEMI--EKVLSTEQDPS 186
L+ PY+R+ A + V ++ + QG L+ D+ M+ V + +
Sbjct: 130 LKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALSEISE 189
Query: 187 AKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNKGEKGKYIKI 246
+ N+ L+ + IN LLT ++ +EWG Q+ +L+ + + E +
Sbjct: 190 SHPNSNLLDLN---PQNINKLLTALNECTEWG---QIFILDCLSNYNPKDDREAQSICER 243
Query: 247 IISLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLL---------LSQSDNNVKL 297
+ L+ ++AV+ L+ + ++ Y+ LL L + V+
Sbjct: 244 VTPRLSHANSAVVLSAVKVLMKFLEL---LPKESDYYNMLLKKLAPPLVTLLSGEPEVQY 300
Query: 298 IVLDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINEVVLMLK 357
+ L +N + +I+ I N P + ++ + LDI++ L + NI +V+ LK
Sbjct: 301 VALRNINLIVQKRPEILKQEIKVFFVKYNDP-IYVKLEKLDIMIRLASQANIAQVLAELK 359
Query: 358 KEVVKTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVII 417
+ E + ++ + ++AI CAIK + A V L+D + + I+
Sbjct: 360 EYAT-------EVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIV 412
Query: 418 FVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVE 468
+R+I P SII L +N + +WI+GEY + + +
Sbjct: 413 VIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNAD 463
>sp|Q9DBG3|AP2B1_MOUSE AP-2 complex subunit beta OS=Mus musculus GN=Ap2b1 PE=1 SV=1
Length = 937
Score = 84.0 bits (206), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 102/471 (21%), Positives = 202/471 (42%), Gaps = 47/471 (9%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
E+K L + +A+KK I + G+ + LF +V + +++ ++KL+ LYL
Sbjct: 17 ELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVN-CMQTDNLELKKLVYLYLMN 75
Query: 81 IDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
K+ P+M ++ N + + PN IR + +R + + +I E L + +
Sbjct: 76 YAKSQ------PDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKC 129
Query: 140 LQHRHPYIRRNAILAVMAIYKL------PQG-----EQLLVDAPEMI--EKVLSTEQDPS 186
L+ PY+R+ A + V ++ + QG L+ D+ M+ V + +
Sbjct: 130 LKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALSEISE 189
Query: 187 AKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNKGEKGKYIKI 246
+ N+ L+ + IN LLT ++ +EWG Q+ +L+ + + E +
Sbjct: 190 SHPNSNLLDLN---PQNINKLLTALNECTEWG---QIFILDCLSNYNPKDDREAQSICER 243
Query: 247 IISLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLL---------LSQSDNNVKL 297
+ L+ ++AV+ L+ + ++ Y+ LL L + V+
Sbjct: 244 VTPRLSHANSAVVLSAVKVLMKFLEL---LPKDSDYYNMLLKKLAPPLVTLLSGEPEVQY 300
Query: 298 IVLDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINEVVLMLK 357
+ L +N + +I+ I N P + ++ + LDI++ L + NI +V+ LK
Sbjct: 301 VALRNINLIVQKRPEILKQEIKVFFVKYNDP-IYVKLEKLDIMIRLASQANIAQVLAELK 359
Query: 358 KEVVKTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVII 417
+ E + ++ + ++AI CAIK + A V L+D + + I+
Sbjct: 360 EYAT-------EVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIV 412
Query: 418 FVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVE 468
+R+I P SII L +N + +WI+GEY + + +
Sbjct: 413 VIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNAD 463
>sp|P62944|AP2B1_RAT AP-2 complex subunit beta OS=Rattus norvegicus GN=Ap2b1 PE=1 SV=1
Length = 937
Score = 83.6 bits (205), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 102/471 (21%), Positives = 202/471 (42%), Gaps = 47/471 (9%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
E+K L + +A+KK I + G+ + LF +V + +++ ++KL+ LYL
Sbjct: 17 ELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVN-CMQTDNLELKKLVYLYLMN 75
Query: 81 IDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
K+ P+M ++ N + + PN IR + +R + + +I E L + +
Sbjct: 76 YAKSQ------PDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKC 129
Query: 140 LQHRHPYIRRNAILAVMAIYKL------PQG-----EQLLVDAPEMI--EKVLSTEQDPS 186
L+ PY+R+ A + V ++ + QG L+ D+ M+ V + +
Sbjct: 130 LKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALSEISE 189
Query: 187 AKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNKGEKGKYIKI 246
+ N+ L+ + IN LLT ++ +EWG Q+ +L+ + + E +
Sbjct: 190 SHPNSNLLDLN---PQNINKLLTALNECTEWG---QIFILDCLSNYNPKDDREAQSICER 243
Query: 247 IISLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLL---------LSQSDNNVKL 297
+ L+ ++AV+ L+ + ++ Y+ LL L + V+
Sbjct: 244 VTPRLSHANSAVVLSAVKVLMKFLEL---LPKDSDYYNMLLKKLAPPLVTLLSGEPEVQY 300
Query: 298 IVLDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINEVVLMLK 357
+ L +N + +I+ I N P + ++ + LDI++ L + NI +V+ LK
Sbjct: 301 VALRNINLIVQKRPEILKQEIKVFFVKYNDP-IYVKLEKLDIMIRLASQANIAQVLAELK 359
Query: 358 KEVVKTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVII 417
+ E + ++ + ++AI CAIK + A V L+D + + I+
Sbjct: 360 EYAT-------EVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIV 412
Query: 418 FVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVE 468
+R+I P SII L +N + +WI+GEY + + +
Sbjct: 413 VIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNAD 463
>sp|P63010|AP2B1_HUMAN AP-2 complex subunit beta OS=Homo sapiens GN=AP2B1 PE=1 SV=1
Length = 937
Score = 83.6 bits (205), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 102/471 (21%), Positives = 202/471 (42%), Gaps = 47/471 (9%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
E+K L + +A+KK I + G+ + LF +V + +++ ++KL+ LYL
Sbjct: 17 ELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVN-CMQTDNLELKKLVYLYLMN 75
Query: 81 IDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
K+ P+M ++ N + + PN IR + +R + + +I E L + +
Sbjct: 76 YAKSQ------PDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKC 129
Query: 140 LQHRHPYIRRNAILAVMAIYKL------PQG-----EQLLVDAPEMI--EKVLSTEQDPS 186
L+ PY+R+ A + V ++ + QG L+ D+ M+ V + +
Sbjct: 130 LKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALSEISE 189
Query: 187 AKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNKGEKGKYIKI 246
+ N+ L+ + IN LLT ++ +EWG Q+ +L+ + + E +
Sbjct: 190 SHPNSNLLDLN---PQNINKLLTALNECTEWG---QIFILDCLSNYNPKDDREAQSICER 243
Query: 247 IISLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLL---------LSQSDNNVKL 297
+ L+ ++AV+ L+ + ++ Y+ LL L + V+
Sbjct: 244 VTPRLSHANSAVVLSAVKVLMKFLEL---LPKDSDYYNMLLKKLAPPLVTLLSGEPEVQY 300
Query: 298 IVLDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINEVVLMLK 357
+ L +N + +I+ I N P + ++ + LDI++ L + NI +V+ LK
Sbjct: 301 VALRNINLIVQKRPEILKQEIKVFFVKYNDP-IYVKLEKLDIMIRLASQANIAQVLAELK 359
Query: 358 KEVVKTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVII 417
+ E + ++ + ++AI CAIK + A V L+D + + I+
Sbjct: 360 EYAT-------EVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIV 412
Query: 418 FVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVE 468
+R+I P SII L +N + +WI+GEY + + +
Sbjct: 413 VIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNAD 463
>sp|Q08DS7|AP1B1_BOVIN AP-1 complex subunit beta-1 OS=Bos taurus GN=AP2B1 PE=2 SV=1
Length = 951
Score = 83.6 bits (205), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 102/471 (21%), Positives = 202/471 (42%), Gaps = 47/471 (9%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
E+K L + +A+KK I + G+ + LF +V + +++ ++KL+ LYL
Sbjct: 17 ELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVN-CMQTDNLELKKLVYLYLMN 75
Query: 81 IDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
K+ P+M ++ N + + PN IR + +R + + +I E L + +
Sbjct: 76 YAKSQ------PDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKC 129
Query: 140 LQHRHPYIRRNAILAVMAIYKL------PQG-----EQLLVDAPEMI--EKVLSTEQDPS 186
L+ PY+R+ A + V ++ + QG L+ D+ M+ V + +
Sbjct: 130 LKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALSEISE 189
Query: 187 AKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNKGEKGKYIKI 246
+ N+ L+ + IN LLT ++ +EWG Q+ +L+ + + E +
Sbjct: 190 SHPNSNLLDLN---PQNINKLLTALNECTEWG---QIFILDCLSNYNPKDDREAQSICER 243
Query: 247 IISLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLL---------LSQSDNNVKL 297
+ L+ ++AV+ L+ + ++ Y+ LL L + V+
Sbjct: 244 VTPRLSHANSAVVLSAVKVLMKFLEL---LPKESDYYNMLLKKLAPPLVTLLSGEPEVQY 300
Query: 298 IVLDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINEVVLMLK 357
+ L +N + +I+ I N P + ++ + LDI++ L + NI +V+ LK
Sbjct: 301 VALRNINLIVQKRPEILKQEIKVFFVKYNDP-IYVKLEKLDIMIRLASQANIAQVLAELK 359
Query: 358 KEVVKTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVII 417
+ E + ++ + ++AI CAIK + A V L+D + + I+
Sbjct: 360 EYAT-------EVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIV 412
Query: 418 FVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVE 468
+R+I P SII L +N + +WI+GEY + + +
Sbjct: 413 VIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNAD 463
>sp|O00203|AP3B1_HUMAN AP-3 complex subunit beta-1 OS=Homo sapiens GN=AP3B1 PE=1 SV=3
Length = 1094
Score = 83.2 bits (204), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 120/497 (24%), Positives = 225/497 (45%), Gaps = 79/497 (15%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
++K+ LE N AK+DAMK+ + ++ G+ +LF +V+ V S++ I+KL+ +YL
Sbjct: 46 DLKQMLESNKDSAKLDAMKRIVGMIAKGKNASELFPAVVKNVA-SKNIEIKKLVYVYL-- 102
Query: 81 IDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNL 140
+ + + + +L + L+ PN+ IR LR L + I+ ++ ++ +
Sbjct: 103 VRYAEEQQDL---ALLSISTFQRALKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAS 159
Query: 141 QHRHPYIRRNAILAVMAIYKL-PQGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLF--T 197
PY+R+NA A+ +Y L P+ +++L+ E+IEK+L + A + +M F
Sbjct: 160 ADLSPYVRKNAAHAIQKLYSLDPEQKEMLI---EVIEKLLKDKSTLVA--GSVVMAFEEV 214
Query: 198 CDQDR----AINY--LLTHVDRVSEWGELLQMVVLELIRKVCRT------NKGEK----G 241
C DR NY L + V EWG Q+V++ ++ + RT +G++ G
Sbjct: 215 CP-DRIDLIHKNYRKLCNLLVDVEEWG---QVVIIHMLTRYARTQFVSPWKEGDELEDNG 270
Query: 242 K----------------------------YIKIIISLLNAPSTAVIYECAGTLVSLSSAP 273
K I+ LL + + AV+ A +S P
Sbjct: 271 KNFYESDDDQKEKTDKKKKPYTMDPDHRLLIRNTKPLLQSRNAAVVMAVAQLYWHIS--P 328
Query: 274 TAIRAAANTYSQLLLSQSDNNVKLIVLDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIR 333
+ A + S + L +S+ V+ IVL + + S R M + + ++ I+
Sbjct: 329 KS-EAGIISKSLVRLLRSNREVQYIVLQNIATM-SIQRKGMFEPYLKSFYVRSTDPTMIK 386
Query: 334 RKTLDIVLELITPRNINEVVLMLKKEVVKTQSGELEKNGEYRQMLIQAIHSCAIKFPEVA 393
L+I+ L NI+ +L + VK+Q + ++ IQ I CA EV
Sbjct: 387 TLKLEILTNLANEANIS-TLLREFQTYVKSQ------DKQFAAATIQTIGRCATNILEVT 439
Query: 394 STVVHLLMDFLGDSNVASAIDVIIFVREIIEMNPKLRVSII---TRLLDNFYQIRAARVC 450
T ++ L+ L + + + ++ ++++++M P II +LLD+ + AR
Sbjct: 440 DTCLNGLVCLLSNRDEIVVAESVVVIKKLLQMQPAQHGEIIKHMAKLLDSI-TVPVARAS 498
Query: 451 TCALWIIGEYCQSLSEV 467
LW+IGE C+ + ++
Sbjct: 499 I--LWLIGENCERVPKI 513
>sp|Q7YRF1|AP3B1_CANFA AP-3 complex subunit beta-1 OS=Canis familiaris GN=AP3B1 PE=2 SV=1
Length = 1091
Score = 83.2 bits (204), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 118/497 (23%), Positives = 222/497 (44%), Gaps = 79/497 (15%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
++K+ LE N AK+DAMK+ + ++ G+ +LF +V+ V S++ I+KL+ +YL
Sbjct: 46 DLKQMLESNKDSAKLDAMKRIVGMIAKGKNASELFPAVVKNVA-SKNIEIKKLVYVYL-- 102
Query: 81 IDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNL 140
+ + + + +L + L+ PN+ IR LR L + I+ ++ ++ +
Sbjct: 103 VRYAEEQQDL---ALLSISTFQRALKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAS 159
Query: 141 QHRHPYIRRNAILAVMAIYKL-PQGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLF--T 197
PY+R+NA A+ +Y L P+ +++L+ E+IEK+L + A + +M F
Sbjct: 160 ADLSPYVRKNAAHAIQKLYSLDPEQKEMLI---EVIEKLLKDKSTLVA--GSVVMAFEEV 214
Query: 198 CDQDR----AINY--LLTHVDRVSEWGELLQMVVLELIRKVCRTN------------KGE 239
C DR NY L + V EWG Q+V++ ++ + RT E
Sbjct: 215 C-PDRIDLIHKNYRKLCNLLVDVEEWG---QVVIIHMLTRYARTQFVSPWKEDDGLEDNE 270
Query: 240 KGKY--------------------------IKIIISLLNAPSTAVIYECAGTLVSLSSAP 273
K Y I+ LL + + AV+ A +S
Sbjct: 271 KNFYESDDEQKEKTDQKKKPYAMDPDHRLLIRNTKPLLQSRNAAVVMAVAQLYWHISPK- 329
Query: 274 TAIRAAANTYSQLLLSQSDNNVKLIVLDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIR 333
+ + + + +LL +S+ V+ IVL + + S R M++ + ++ I+
Sbjct: 330 SEVGIISKSLVRLL--RSNREVQYIVLQNIATM-SIQRKGMLEPYLKSFYVRSTDPTMIK 386
Query: 334 RKTLDIVLELITPRNINEVVLMLKKEVVKTQSGELEKNGEYRQMLIQAIHSCAIKFPEVA 393
L+I+ L NI+ +L + VK+Q + ++ IQ I CA EV
Sbjct: 387 ILKLEILTNLANEANIS-TLLREFQTYVKSQ------DKQFAAATIQTIGRCATSISEVT 439
Query: 394 STVVHLLMDFLGDSNVASAIDVIIFVREIIEMNPKLRVSII---TRLLDNFYQIRAARVC 450
T + L+ L + + + ++ ++++++M P II +LLD+ + AR
Sbjct: 440 DTCLSGLVCLLSNRDEIVVAESVVVIKKLLQMQPAQHGEIIKHMAKLLDSI-TVPVARAS 498
Query: 451 TCALWIIGEYCQSLSEV 467
LW+IGE C+ + ++
Sbjct: 499 I--LWLIGENCERVPKI 513
>sp|Q54X82|AP1B_DICDI AP-1 complex subunit beta OS=Dictyostelium discoideum GN=ap1b1 PE=3
SV=1
Length = 942
Score = 80.1 bits (196), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 105/474 (22%), Positives = 195/474 (41%), Gaps = 41/474 (8%)
Query: 10 HFDKGTPAIANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHT 69
+F +E+KE L K +A+KK I + G+ + LF T V + + +
Sbjct: 6 YFQTTKKGEIHELKEELLSQREDKKKEAVKKVIAAMTVGKDVSMLF-THVLNCMQTHNLE 64
Query: 70 IQKLLLLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEII 129
++KL+ LY+ K IL + + PN IR + +R + + I
Sbjct: 65 LKKLVYLYVMNYAKNHPD-----RAILAVNTFQKDASDPNPLIRALAVRTMGCIRVDNIT 119
Query: 130 EPLIPSVLQNLQHRHPYIRRNAILAVMAIYKL------PQG-----EQLLVDAPEMI--E 176
E L + L+ + PY+R+ A + V +Y + QG LL D+ M+
Sbjct: 120 EHLCEPLRHALKDQDPYVRKTAAVCVAKLYDVNPELVENQGFLNILNDLLGDSNPMVVAN 179
Query: 177 KVLS-TEQDPSAKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRT 235
V S TE D +K+ F + +N LL ++ +EWG Q+ +L + K
Sbjct: 180 AVASLTEIDEVSKKEVFRI-----HSGNLNKLLAALNECTEWG---QVFILNSLCKYTPR 231
Query: 236 NKGEKGKYIKIIISLLNAPSTAVIYECAGTLVSLSSA---PTAIRAAANTYSQLLLS--Q 290
+ E + + L ++AV+ L+ ++ IR + L++
Sbjct: 232 DSQEAENVCERVAPRLQHANSAVVLSAVKVLMKYMNSIGNNDVIRLFCKKMAPPLVTLLS 291
Query: 291 SDNNVKLIVLDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNIN 350
+ ++ + L +N + +I+ + N P + ++ + L+I++ L +NI
Sbjct: 292 KEPEIQFLGLRNINLIVQKRPEILQYEMKVFFCKYNDP-IYVKMEKLEIMIMLANEKNIE 350
Query: 351 EVVLMLKKEVVKTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVA 410
EV+L K+ E + E+ + ++AI CAIK + + +L+D +
Sbjct: 351 EVLLEFKEYAT-------EIDVEFVRKAVRAIGRCAIKIDRASERCIQVLLDLIQTKVNY 403
Query: 411 SAIDVIIFVREIIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSL 464
+ II +++I P II L N + +WIIGEY + +
Sbjct: 404 VVQEAIIVIKDIFRKYPNKYEGIIATLCANLESLDEPEAKASMIWIIGEYAERI 457
>sp|Q9SUS3|APBLB_ARATH Beta-adaptin-like protein B OS=Arabidopsis thaliana GN=BETAB-AD
PE=1 SV=1
Length = 894
Score = 79.7 bits (195), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 103/481 (21%), Positives = 210/481 (43%), Gaps = 41/481 (8%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
E+KE L + DA+KK I + G+ + LF +V + +E+ ++KL+ LYL
Sbjct: 19 ELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVN-CMQTENLELKKLVYLYLIN 77
Query: 81 IDKTDAKGRVLPEM-ILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
K+ P++ IL + Q PN IR + +R + + +I E L + +
Sbjct: 78 YAKSQ------PDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYLCDPLQKC 131
Query: 140 LQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIE--KVLSTEQDP-----------S 186
L+ PY+R+ A + V ++ + LV+ +E K L ++ +P
Sbjct: 132 LKDDDPYVRKTAAICVAKLFDI---NAELVEDRGFLEALKDLISDNNPMVVANAVAALAE 188
Query: 187 AKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNKGEKGKYIKI 246
+ N+ +F + + LLT ++ +EWG Q+ +L+ + K + E ++
Sbjct: 189 IQENSSSPIFEINS-TTLTKLLTALNECTEWG---QVFILDALSKYKAADPREAENIVER 244
Query: 247 IISLLNAPSTAVIYECAGTL---VSLSSAPTAIRAAANTYSQLLLS--QSDNNVKLIVLD 301
+ L + AV+ + + L ++ IR + L++ ++ ++ + L
Sbjct: 245 VTPRLQHANCAVVLSAVKMILQQMELITSTDVIRNLCKKMAPPLVTLLSAEPEIQYVALR 304
Query: 302 RLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINEVVLMLKKEVV 361
+N + I+ I N P + ++ + L+I+++L + RNI++V+L K+
Sbjct: 305 NINLIVQKRPTILAHEIKVFFCKYNDP-IYVKMEKLEIMIKLASDRNIDQVLLEFKEYAT 363
Query: 362 KTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVRE 421
E + ++ + ++AI CAIK A + +L++ + + II +++
Sbjct: 364 -------EVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKD 416
Query: 422 IIEMNPKLRVSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCLGEL 481
I P SII L ++ + +WIIGEY + + + + + + E
Sbjct: 417 IFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNADELLESFLENFPEE 476
Query: 482 P 482
P
Sbjct: 477 P 477
>sp|O35643|AP1B1_MOUSE AP-1 complex subunit beta-1 OS=Mus musculus GN=Ap1b1 PE=1 SV=2
Length = 943
Score = 77.0 bits (188), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 97/448 (21%), Positives = 190/448 (42%), Gaps = 55/448 (12%)
Query: 48 GETLPQLFITIVRYVLPSEDHTIQKLLLLYLEIIDKTDAKGRVLPEMILICQN-LRNNLQ 106
G+ + LF +V + +++ ++KL+ LYL K+ P+M ++ N + +
Sbjct: 44 GKDVSALFPDVVN-CMQTDNLELKKLVYLYLMNYAKSQ------PDMAIMAVNTFVKDCE 96
Query: 107 HPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQ 166
PN IR + +R + + +I E L + + L+ PY+R+ A + V ++ + Q
Sbjct: 97 DPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDI--NAQ 154
Query: 167 LLVDAPEM-IEKVLSTEQDPSAKRNAFLMLFTCDQD-----------RAINYLLTHVDRV 214
L+ D + K L ++ +P NA L + ++IN LLT ++
Sbjct: 155 LVEDQGFLDTLKDLISDSNPMVVANAVAALSEIAESHPSSNLLDLNPQSINKLLTALNEC 214
Query: 215 SEWGELLQMVVLELIRKVCRTNKGEKGKYIKIIISLLNAPSTAVIYECAGTLVS------ 268
+EWG Q+ +L+ + + E + + L+ ++AV+ L+
Sbjct: 215 TEWG---QIFILDCLANYMPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLS 271
Query: 269 --LSSAPTAIRAAANTYSQLLLSQSD------NNVKLIVLDRLNELRSSHRDIMVDLIMD 320
L T ++ A LL ++ + N+ LIV R L+ + V
Sbjct: 272 KDLDYYATLLKKLAPPLVTLLSAEPELQYVALRNINLIVQKRPEILKHEMKVFFVKY--- 328
Query: 321 VLRALNSPNLDIRRKTLDIVLELITPRNINEVVLMLKKEVVKTQSGELEKNGEYRQMLIQ 380
N P + ++ + LDI++ L + NI +V+ LK+ E + ++ + ++
Sbjct: 329 -----NDP-IYVKLEKLDIMIRLASQANIAQVLAELKEYAT-------EVDVDFVRKAVR 375
Query: 381 AIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREIIEMNPKLRVSIITRLLDN 440
AI CAIK + A V L+D + + I+ +++I P S+I L +N
Sbjct: 376 AIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIKDIFRKYPNKYESVIATLCEN 435
Query: 441 FYQIRAARVCTCALWIIGEYCQSLSEVE 468
+ +WI+GEY + + +
Sbjct: 436 LDSLDEPEARAAMIWIVGEYAERIDNAD 463
>sp|Q10567|AP1B1_HUMAN AP-1 complex subunit beta-1 OS=Homo sapiens GN=AP1B1 PE=1 SV=2
Length = 949
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 97/448 (21%), Positives = 190/448 (42%), Gaps = 55/448 (12%)
Query: 48 GETLPQLFITIVRYVLPSEDHTIQKLLLLYLEIIDKTDAKGRVLPEMILICQN-LRNNLQ 106
G+ + LF +V + +++ ++KL+ LYL K+ P+M ++ N + +
Sbjct: 44 GKDVSALFPDVVN-CMQTDNLELKKLVYLYLMNYAKSQ------PDMAIMAVNTFVKDCE 96
Query: 107 HPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQ 166
PN IR + +R + + +I E L + + L+ PY+R+ A + V ++ + Q
Sbjct: 97 DPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDI--NAQ 154
Query: 167 LLVDAPEM-IEKVLSTEQDPSAKRNAFLMLFTCDQD-----------RAINYLLTHVDRV 214
L+ D + K L ++ +P NA L + ++IN LLT ++
Sbjct: 155 LVEDQGFLDTLKDLISDSNPMVVANAVAALSEIAESHPSSNLLDLNPQSINKLLTALNEC 214
Query: 215 SEWGELLQMVVLELIRKVCRTNKGEKGKYIKIIISLLNAPSTAVIYECAGTLVS------ 268
+EWG Q+ +L+ + + E + + L+ ++AV+ L+
Sbjct: 215 TEWG---QIFILDCLANYMPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLS 271
Query: 269 --LSSAPTAIRAAANTYSQLLLSQSD------NNVKLIVLDRLNELRSSHRDIMVDLIMD 320
L T ++ A LL ++ + N+ LIV R L+ + V
Sbjct: 272 KDLDYYGTLLKKLAPPLVTLLSAEPELQYVALRNINLIVQKRPEILKHEMKVFFVKY--- 328
Query: 321 VLRALNSPNLDIRRKTLDIVLELITPRNINEVVLMLKKEVVKTQSGELEKNGEYRQMLIQ 380
N P + ++ + LDI++ L + NI +V+ LK+ E + ++ + ++
Sbjct: 329 -----NDP-IYVKLEKLDIMIRLASQANIAQVLAELKEYAT-------EVDVDFVRKAVR 375
Query: 381 AIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREIIEMNPKLRVSIITRLLDN 440
AI CAIK + A V L+D + + I+ +++I P S+I L +N
Sbjct: 376 AIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIKDIFRKYPNKYESVIATLCEN 435
Query: 441 FYQIRAARVCTCALWIIGEYCQSLSEVE 468
+ +WI+GEY + + +
Sbjct: 436 LDSLDEPEARAAMIWIVGEYAERIDNAD 463
>sp|Q13367|AP3B2_HUMAN AP-3 complex subunit beta-2 OS=Homo sapiens GN=AP3B2 PE=1 SV=2
Length = 1082
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 113/510 (22%), Positives = 215/510 (42%), Gaps = 93/510 (18%)
Query: 20 NEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLE 79
+++KE L+ N K++AMK+ + ++ G+ LF +V+ V ++ ++KL+ +YL
Sbjct: 40 DDLKEMLDTNKDSLKLEAMKRIVAMIARGKNASDLFPAVVKNVA-CKNIEVKKLVYVYL- 97
Query: 80 IIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
+ + + + +L + L+ PN+ IR LR L + I+ ++ ++ +
Sbjct: 98 -VRYAEEQQDL---ALLSISTFQRGLKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEA 153
Query: 140 LQHRHPYIRRNAILAVMAIYKL--PQGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLF- 196
PY+R+ A A+ +Y L Q +QL+ E+IEK+L+ + A + +M F
Sbjct: 154 ASDMSPYVRKTAAHAIPKLYSLDSDQKDQLI----EVIEKLLADKTTLVA--GSVVMAFE 207
Query: 197 -TCDQDRAI---NY--LLTHVDRVSEWGELLQMVVLELIRKVCRTN-------------K 237
C + + NY L + V EWG Q+V++ ++ + RT
Sbjct: 208 EVCPERIDLIHKNYRKLCNLLIDVEEWG---QVVIISMLTRYARTQFLSPTQNESLLEEN 264
Query: 238 GEKGKY-----------------------------------IKIIISLLNAPSTAVIYEC 262
EK Y ++ LL + S AV+
Sbjct: 265 AEKAFYGSEEDEAKGAGSEETAAAAAPSRKPYVMDPDHRLLLRNTKPLLQSRSAAVVMAV 324
Query: 263 AGTLVSLSSAPTA-IRAAANTYSQLLLSQSDNNVKLIVLDRLNELRSSHRDIMVDLIMDV 321
A L AP A + A +LL S S+ V+ +VL + + R + +
Sbjct: 325 AQLYFHL--APKAEVGVIAKALVRLLRSHSE--VQYVVLQNVATMSIKRRGMFEPYLKSF 380
Query: 322 -LRALNSPNLDIRRKTLDIVLELITPRNINEVVLMLKKEVVKTQSGELEKNGEYRQMLIQ 380
+R+ + + I + L+++ L NI V+ + + + ++ IQ
Sbjct: 381 YIRSTDPTQIKILK--LEVLTNLANETNIPTVLREFQTYIRSM-------DKDFVAATIQ 431
Query: 381 AIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREIIEMNPKLRVSII---TRL 437
AI CA V T ++ L+ L + + + ++ ++++++M P II +L
Sbjct: 432 AIGRCATNIGRVRDTCLNGLVQLLSNRDELVVAESVVVIKKLLQMQPAQHGEIIKHLAKL 491
Query: 438 LDNFYQIRAARVCTCALWIIGEYCQSLSEV 467
DN Q+ AR LW+IGEYC+ + +
Sbjct: 492 TDNI-QVPMARASI--LWLIGEYCEHVPRI 518
>sp|Q9JME5|AP3B2_MOUSE AP-3 complex subunit beta-2 OS=Mus musculus GN=Ap3b2 PE=1 SV=2
Length = 1082
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 113/510 (22%), Positives = 216/510 (42%), Gaps = 93/510 (18%)
Query: 20 NEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLE 79
+++KE L+ N K++AMK+ + ++ G+ LF +V+ V ++ ++KL+ +YL
Sbjct: 40 DDLKEMLDTNKDSLKLEAMKRIVAMIARGKNASDLFPAVVKNVA-CKNIEVKKLVYVYL- 97
Query: 80 IIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
+ + + + +L + L+ PN+ IR LR L + I+ ++ ++ +
Sbjct: 98 -VRYAEEQQDL---ALLSISTFQRGLKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEA 153
Query: 140 LQHRHPYIRRNAILAVMAIYKL--PQGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLF- 196
PY+R+ A A+ +Y L Q +QL+ E+IEK+L+ + A + +M F
Sbjct: 154 ASDMSPYVRKTAAHAIPKLYSLDSDQKDQLI----EVIEKLLADKTTLVA--GSVVMAFE 207
Query: 197 -TCDQDRAI---NY--LLTHVDRVSEWGELLQMVVLELIRKVCRTN-------------K 237
C + + NY L + V EWG Q+V++ ++ + RT
Sbjct: 208 EVCPERIDLIHKNYRKLCNLLIDVEEWG---QVVIISMLTRYARTQFLSPTQNESLLEEN 264
Query: 238 GEKGKY-----------------------------------IKIIISLLNAPSTAVIYEC 262
EK Y ++ LL + S AV+
Sbjct: 265 PEKAFYGSEEDEAKGPGSEEAATAALPARKPYVMDPDHRLLLRNTKPLLQSRSAAVVMAV 324
Query: 263 AGTLVSLSSAPTA-IRAAANTYSQLLLSQSDNNVKLIVLDRLNELRSSHRDIMVDLIMDV 321
A L AP A + A +LL S S+ V+ +VL + + R + +
Sbjct: 325 AQLYFHL--APKAEVGVIAKALVRLLRSHSE--VQYVVLQNVATMSIKRRGMFEPYLKSF 380
Query: 322 -LRALNSPNLDIRRKTLDIVLELITPRNINEVVLMLKKEVVKTQSGELEKNGEYRQMLIQ 380
+R+ + + I + L+++ L NI V+ + + + ++ IQ
Sbjct: 381 YIRSTDPTQIKILK--LEVLTNLANETNIPTVLREFQTYIRSM-------DKDFVAATIQ 431
Query: 381 AIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREIIEMNPKLRVSII---TRL 437
AI CA V T ++ L+ L + + + ++ ++++++M P II +L
Sbjct: 432 AIGRCATNIGRVRDTCLNGLVQLLSNRDELVVAESVVVIKKLLQMQPAQHGEIIKHLAKL 491
Query: 438 LDNFYQIRAARVCTCALWIIGEYCQSLSEV 467
DN Q+ AR LW+IGEYC+ + ++
Sbjct: 492 TDNI-QVPMARASI--LWLIGEYCEHVPKI 518
>sp|O14617|AP3D1_HUMAN AP-3 complex subunit delta-1 OS=Homo sapiens GN=AP3D1 PE=1 SV=1
Length = 1153
Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 111/479 (23%), Positives = 208/479 (43%), Gaps = 53/479 (11%)
Query: 20 NEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKL--LLLY 77
+EIK+ L+ +++ K +A+ K L + G + I+ V+ + T +++ L
Sbjct: 41 DEIKQELKQDNIAVKANAVCKLTYLQMLGYDISWAAFNIIE-VMSASKFTFKRIGYLAAS 99
Query: 78 LEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVL 137
+ TD ++L +R +L P++Y GV L L ++ L ++
Sbjct: 100 QSFHEGTDV-------IMLTTNQIRKDLSSPSQYDTGVALTGLSCFVTPDLARDLANDIM 152
Query: 138 QNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLFT 197
+ H PYIR+ A+L + ++ L E L P + EK+ + DP + A ++
Sbjct: 153 TLMSHTKPYIRKKAVLIMYKVF-LKYPESLRPAFPRLKEKL--EDPDPGVQSAAVNVICE 209
Query: 198 CDQDRAINYL----LTHVDRVSEWGELLQMVVLELIRKVCRTNKGEKGKYIKIIISLLNA 253
+ NYL L S + + +++L + K I+ + +L+++
Sbjct: 210 LARRNPKNYLSLAPLFFKLMTSSTNNWVLIKIIKLFGALTPLEPRLGKKLIEPLTNLIHS 269
Query: 254 PST-AVIYECAGT----LVSLSSAPTAIRAAANTYSQ---LLLSQSDNNVKLIVLDRLNE 305
S +++YEC T L+SLSS A+ Q +L+ SD N+K + L +++
Sbjct: 270 TSAMSLLYECVNTVIAVLISLSSGMPNHSASIQLCVQKLRILIEDSDQNLKYLGLLAMSK 329
Query: 306 LRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINEVVLMLKKEVVKTQS 365
+ +H + +L+ L+ + IR + LD++ +++ +N+ E+V L V K +
Sbjct: 330 ILKTHPKSVQSHKDLILQCLDDKDESIRLRALDLLYGMVSKKNLMEIVKKLMTHVDKAE- 388
Query: 366 GELEKNGEYR-QMLIQAIHSCA-------IKFPEVASTVVHLLM---DFLGDSNVASAID 414
YR ++L + I C+ F S +V L G A +D
Sbjct: 389 -----GTTYRDELLTKIIDICSQSNYQYITNFEWYISILVELTRLEGTRHGHLIAAQMLD 443
Query: 415 VIIFVREIIEMNPKLRVSIITRLLDNFYQIRAA-------RVCTCALWIIGEYCQSLSE 466
V I V+ I K VS ++ LLD+ + + ++ V A WI GE+ + L E
Sbjct: 444 VAIRVKAIR----KFAVSQMSALLDSAHLLASSTQRNGICEVLYAAAWICGEFSEHLQE 498
>sp|O54774|AP3D1_MOUSE AP-3 complex subunit delta-1 OS=Mus musculus GN=Ap3d1 PE=1 SV=1
Length = 1199
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/477 (23%), Positives = 207/477 (43%), Gaps = 53/477 (11%)
Query: 20 NEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLE 79
+EIK+ L+ +++ K +A+ K L + G + I+ V+ + T +++ L
Sbjct: 41 DEIKQELKQDNIAVKANAVCKLTYLQMLGYDISWAAFNIIE-VMSASKFTFKRVGYLAAS 99
Query: 80 --IIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVL 137
+ TD ++L +R +L P++Y GV L L ++ L ++
Sbjct: 100 QCFHEGTDV-------IMLTTNQIRKDLSSPSQYDTGVALTGLSCFVTPDLARDLANDIM 152
Query: 138 QNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLFT 197
+ H PYIR+ A+L + ++ L E L P + EK+ + DP + A ++
Sbjct: 153 TLMSHTKPYIRKKAVLIMYKVF-LKYPESLRPAFPRLKEKL--EDPDPGVQSAAVNVICE 209
Query: 198 CDQDRAINYL----LTHVDRVSEWGELLQMVVLELIRKVCRTNKGEKGKYIKIIISLLNA 253
+ NYL L S + + +++L + K I+ + +L+++
Sbjct: 210 LARRNPKNYLSLAPLFFKLMTSSTNNWVLIKIIKLFGALTPLEPRLGKKLIEPLTNLIHS 269
Query: 254 PST-AVIYECAGT----LVSLSSAPTAIRAAANTYSQ---LLLSQSDNNVKLIVLDRLNE 305
S +++YEC T L+SLSS A+ Q +L+ SD N+K + L +++
Sbjct: 270 TSAMSLLYECVNTVIAVLISLSSGMPNHSASIQLCVQKLRILIEDSDQNLKYLGLLAMSK 329
Query: 306 LRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINEVVLMLKKEVVKTQS 365
+ +H + +L+ L+ + IR + LD++ +++ +N+ E+V L V K +
Sbjct: 330 ILKTHPKSVQSHKDLILQCLDDKDESIRLRALDLLYGMVSKKNLMEIVKKLMTHVDKAE- 388
Query: 366 GELEKNGEYR-QMLIQAIHSCA-------IKFPEVASTVVHLLM---DFLGDSNVASAID 414
YR ++L + I C+ F S +V L G A +D
Sbjct: 389 -----GTTYRDELLTKIIDICSQSNYQHITNFEWYISILVELTRLEGTRHGHLIAAQMLD 443
Query: 415 VIIFVREIIEMNPKLRVSIITRLLDNFYQIRAA-------RVCTCALWIIGEYCQSL 464
V I V+ I K VS ++ LLD+ + + ++ V A WI GE+ + L
Sbjct: 444 VAIRVKAIR----KFAVSQMSSLLDSAHLVASSTQRNGICEVLYAAAWICGEFSEHL 496
>sp|P52303|AP1B1_RAT AP-1 complex subunit beta-1 OS=Rattus norvegicus GN=Ap1b1 PE=1 SV=1
Length = 949
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 94/449 (20%), Positives = 192/449 (42%), Gaps = 57/449 (12%)
Query: 48 GETLPQLFITIVRYVLPSEDHTIQKLLLLYLEIIDKTDAKGRVLPEMILICQN-LRNNLQ 106
G+ + LF +V + +++ ++KL+ LYL K+ P+M ++ N + +
Sbjct: 44 GKDVSALFPDVVN-CMQTDNLELKKLVYLYLMNYAKSQ------PDMAIMAVNTFVKDCE 96
Query: 107 HPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNLQHRHPYIRRNAILAVMAIYKL----- 161
PN IR + +R + + +I E L + + L+ PY+R+ A + V ++ +
Sbjct: 97 DPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLV 156
Query: 162 -PQG-----EQLLVDAPEMI--EKVLSTEQDPSAKRNAFLMLFTCDQDRAINYLLTHVDR 213
QG + L+ D+ M+ +V + + + ++ L+ ++IN LLT ++
Sbjct: 157 EDQGFLDTLKDLISDSNPMVVANRVAALSEIAESHPSSNLLDLKA---QSINKLLTALNE 213
Query: 214 VSEWGELLQMVVLELIRKVCRTNKGEKGKYIKIIISLLNAPSTAVIYECAGTLVS----- 268
+EW Q+ +L+ + + E + + L+ ++AV+ L+
Sbjct: 214 CTEWA---QIFILDCLGNYMPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFMEML 270
Query: 269 ---LSSAPTAIRAAANTYSQLLLSQSD------NNVKLIVLDRLNELRSSHRDIMVDLIM 319
L T ++ A LL ++ + N+ LIV R L+ + V
Sbjct: 271 SKDLDYYATLLKKLAPPLVTLLSAEPEPQYVPLRNINLIVQKRPEILKHEMKVFFV---- 326
Query: 320 DVLRALNSPNLDIRRKTLDIVLELITPRNINEVVLMLKKEVVKTQSGELEKNGEYRQMLI 379
N P + ++ + LDI++ L + NI +V+ LK+ E + ++ + +
Sbjct: 327 ----KYNDP-IYVKLEKLDIMIRLASQANIAQVLAELKEYAT-------EVDVDFVRKAV 374
Query: 380 QAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREIIEMNPKLRVSIITRLLD 439
+AI CAIK + A V L+D + + I+ +++I P S+I L +
Sbjct: 375 RAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIKDIFRKYPNKYESVIATLCE 434
Query: 440 NFYQIRAARVCTCALWIIGEYCQSLSEVE 468
N + +WI+GEY + + +
Sbjct: 435 NLDSLDEPEARAAMIWIVGEYAERIDNAD 463
>sp|Q865S1|AP3D1_BOVIN AP-3 complex subunit delta-1 OS=Bos taurus GN=AP3D1 PE=1 SV=2
Length = 1207
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 113/496 (22%), Positives = 216/496 (43%), Gaps = 54/496 (10%)
Query: 20 NEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLE 79
+EIK+ L+ +++ K +A+ K L + G + I+ V+ + T +++ L
Sbjct: 41 DEIKQELKQDNIAVKANAVCKLTYLQMLGYDISWAAFNIIE-VMSASKFTFKRIGYLAAS 99
Query: 80 --IIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVL 137
+ TD ++L +R +L P++Y GV L L ++ L ++
Sbjct: 100 QCFHEGTDV-------IMLTTNQIRKDLSSPSQYDTGVALTGLSCFVTPDLARDLANDIM 152
Query: 138 QNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLFT 197
+ H PYIR+ A+L + ++ L E L P + EK+ + DP + A ++
Sbjct: 153 TLMSHTKPYIRKKAVLIMYKVF-LKYPESLRPAFPRLKEKL--EDPDPGVQSAAVNVICE 209
Query: 198 CDQDRAINYL----LTHVDRVSEWGELLQMVVLELIRKVCRTNKGEKGKYIKIIISLLNA 253
+ NYL L S + + +++L + K I+ + +L+++
Sbjct: 210 LARRNPKNYLSLAPLFFKLMTSSTNNWVLIKIIKLFGALTPLEPRLGKKLIEPLTNLIHS 269
Query: 254 PST-AVIYECAGT----LVSLSSAPTAIRAAANTYSQ---LLLSQSDNNVKLIVLDRLNE 305
S +++YEC T L+SLSS A+ Q +L+ SD N+K + L +++
Sbjct: 270 TSAMSLLYECVNTVIAVLISLSSGMPNHSASIQLCVQKLRILIEDSDQNLKYLGLLAMSK 329
Query: 306 LRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINEVVLMLKKEVVKTQS 365
+ +H + VL+ L+ + IR + LD++ +++ +N+ E+V L V K +
Sbjct: 330 ILRTHPKSVQAHKDLVLQCLDDKDESIRLRALDLLYGMVSKKNLMEIVKKLMTHVDKAE- 388
Query: 366 GELEKNGEYR-QMLIQAIHSCA-------IKFPEVASTVVHLLM---DFLGDSNVASAID 414
YR ++L + I C+ F S +V L G A +D
Sbjct: 389 -----GTTYRDELLTKIIDICSQSNYQHITNFEWYISILVELTRLEGTRHGHLIAAQMLD 443
Query: 415 VIIFVREIIEMNPKLRVSIITRLLDNFYQIRAA-------RVCTCALWIIGEYCQSLSEV 467
V I V+ I + V+ ++ LLD+ + + ++ V A WI GE+ + L E
Sbjct: 444 VAIRVKAIR----RFAVAQMSALLDSAHLVASSPQRSGICEVLYAAAWICGEFSEHLQEP 499
Query: 468 ENGI-ATIKQCLGELP 482
+ + A ++ + LP
Sbjct: 500 QQTLEAMLRPKVTTLP 515
>sp|O43079|AP1B1_SCHPO AP-1 complex subunit beta-1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=apl2 PE=1 SV=1
Length = 683
Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 101/466 (21%), Positives = 212/466 (45%), Gaps = 53/466 (11%)
Query: 20 NEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLE 79
+E+++ L ++DA+K+ I + G+ + LF +++ L + D T++KL+ LYL
Sbjct: 20 SELQKGLVSQYAYERIDAVKRTIAAMTVGKDVSSLFPDVLKN-LATRDITLKKLVYLYLI 78
Query: 80 IIDKTDAKGRVLPEM-ILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQ 138
KT P++ IL + + N +R + +R + + +II L + +
Sbjct: 79 NYAKTH------PDLCILAVNTFVKDSEEYNPTLRALAIRTMGCIRVNKIIGYLADPLRK 132
Query: 139 NLQHRHPYIRRNAILAVMAIYKLPQG--------EQL--LVDAPEMI-----EKVLSTEQ 183
L+ HPY+R+ A + V+ +Y L + EQL LV P + + L+
Sbjct: 133 ALKDEHPYVRKAAAVCVVKMYDLDREYCASNGFIEQLQALVSDPNPVVVANAVRSLAEIH 192
Query: 184 DPSAKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNKGEKGKY 243
D ++ F +++T DR L+ + +EWG ++ +L + + RT+ ++ +Y
Sbjct: 193 DQDPEKGYFNVVYTM-TDR----LMVALSECNEWG---RITILNSLARF-RTSDIKEAEY 243
Query: 244 I--KIIISLLNAPSTAVIYECAGTLVSL---SSAPTAIRAAANTYSQLLLSQSDNNVKLI 298
+ +++ +A S V+ +V + SS T L L +D+ ++ +
Sbjct: 244 VCERVVPQFQHANSGVVLSAVKVIMVHIPLFSSDFTDFLYKKMAPPLLTLLSTDSEIQYV 303
Query: 299 VLDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINEVVLMLKK 358
L +N L R + D+ V + L I+ + L I+ L NINE + L+
Sbjct: 304 ALRNIN-LILQKRPSIFDVKTRVFFCKYNDPLYIKMEKLKIITMLACDENINETISELRA 362
Query: 359 EVVKTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAI-DVII 417
V + + E+ + I+ + A+K P V + + + ++ + + N++ + +V +
Sbjct: 363 YVSEVEL-------EFVKQTIKCLGDVALKVPSVINDCISIFLE-IYELNISYMVQEVTV 414
Query: 418 FVREIIEMNPK---LRVSIITRLLDNFYQIRAARVCTCALWIIGEY 460
+ ++ P+ L + ++R+++ RA + WI+GE+
Sbjct: 415 VMETVLRKYPQKIDLLLPYLSRVIEELGDPRAR---SSMAWILGEF 457
>sp|Q99128|AP1G1_USTMA AP-1 complex subunit gamma-1 OS=Ustilago maydis (strain 521 / FGSC
9021) GN=APL4 PE=3 SV=2
Length = 853
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 100/441 (22%), Positives = 188/441 (42%), Gaps = 78/441 (17%)
Query: 75 LLYLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIP 134
L YL I+ D VL L+ L+N+++H N Y+ G+ L + E+ L
Sbjct: 86 LGYLGIMLLLDENTEVL---TLVTNGLKNDMEHSNMYVCGLALCTFANIASEEMSRDLCN 142
Query: 135 SVLQNLQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLM 194
+ + + + YIRR A + M I + P++I+ + Q + +N ++
Sbjct: 143 EIEKLMGSSNTYIRRKAAICAMRIVR---------KVPDLIDHFVDRTQQLLSDKNHGVL 193
Query: 195 LFT-------CDQD--------RAINYLLTHVDRVSEWG------------ELLQMVVLE 227
L C QD RA+ L+ H+ + G LQ+ +L
Sbjct: 194 LCAVTLAIEICRQDDEALTVYRRAVPLLVQHLKSLVTTGYSPEHDVSGITDPFLQVKILR 253
Query: 228 LIRKVCRTNKGEKGKYIKIIISLLNAPSTA-------VIYECAGTLVSLSSAPTAIRAAA 280
L+R + + N + + + I++ + + A ++YE T++ + A +R A
Sbjct: 254 LLRILGKEN-AQASETMNDILAQVATNTEASKNVGNSILYETVLTILEI-DADNGLRVMA 311
Query: 281 NTYSQLLLSQSDNNVKLIVLDRLNELRS-------SHRDIMVDLIMDVLRALNSPNLDIR 333
LS DNN++ + L+ L+++ S HR+I++D + D ++ IR
Sbjct: 312 INILGKFLSNRDNNIRYVALNTLSKVVSMDTNAVQRHRNIILDCLRD-------GDISIR 364
Query: 334 RKTLDIVLELITPRNINEVVLMLKKEVVKTQSGELEKNGEYRQMLIQAIHSCAIKFPEVA 393
R+ L++ LI N+ +L +E++ E+ N E++ + I A KF
Sbjct: 365 RRALELSYALINESNVR----VLTRELLSFL--EVADN-EFKLGMTTQICLAAEKFAPNK 417
Query: 394 ----STVVHLLMDFLGDSNVASAIDVIIFVREIIEMNPKLRVSIITRLLDNFYQIRAARV 449
TV+ +L L + V I + F+R ++ P+L+ + +L +Q +
Sbjct: 418 RWHIDTVLRVLK--LAGNYVREEI-LSAFIR-LVCHTPELQAYTVQKLFSGLHQDFSQES 473
Query: 450 CT-CALWIIGEYCQSLSEVEN 469
T A+W+IGE+ L + N
Sbjct: 474 LTLAAVWVIGEFGDVLIQGGN 494
>sp|Q8I8U2|AP1G_DICDI AP-1 complex subunit gamma OS=Dictyostelium discoideum GN=ap1g1
PE=1 SV=1
Length = 895
Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 96/417 (23%), Positives = 185/417 (44%), Gaps = 80/417 (19%)
Query: 93 EMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNLQHRHPYIRRNA 151
E++L+ N +R ++ + N++I GV+L + T + + P + + + H +PYIR+ A
Sbjct: 96 EVLLLATNCIRGDIMNSNQFIVGVSLCAFGNICSTAMARDISPEIEKVISHSNPYIRKKA 155
Query: 152 IL-AVMAIYKLPQGEQLLVDAPEMIEKVLSTEQDPSAKRNAF-LMLFTCDQD-------- 201
L A+ + K+P + + P++ K L +E++ + A L++ C+ D
Sbjct: 156 ALCAIRVLRKVPDLTENYI--PKI--KALLSERNHAVILTALTLIIEICEMDSTQIIHFK 211
Query: 202 RAINYLLTHVDRVSEWGEL------------LQMVVLELIRKVCRTNKGEKGKYIKIIIS 249
+ + L+ + ++ G L LQ+ +L L+R + N E + I++
Sbjct: 212 KMVPQLVRILKSLTSSGYLPEHDIGGVTDPFLQVKILRLLR-ILGQNDPEASDAMNDILA 270
Query: 250 LL--NAPST-----AVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLDR 302
+ N ST A++YEC T++++ S A N + LL++ DNN++ + L+
Sbjct: 271 QVSTNTDSTKNVGNAILYECVQTIMTIESENGLKVMAINILGRFLLNR-DNNIRYVALNT 329
Query: 303 LNELRSS-------HRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINEVVLM 355
L+ + ++ HR+ +V+ + D P++ IR + LD++ L+T NI +V
Sbjct: 330 LSRVVNTDIQAVQRHRNTIVECLKD-------PDVSIRCRALDLIYSLVTESNIRVLVRE 382
Query: 356 L-----------KKEVVKTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFL 404
L K E+V EK ++ I I V+ + +F+
Sbjct: 383 LLNFLLIADAQFKSELVAKLCIVTEKYAPNKRWQIDTILR-----------VMSIAGNFI 431
Query: 405 GDSNVASAIDVIIFVREIIEMNPKLRVSIITRLLDNFYQ-IRAARVCTCALWIIGEY 460
D ++ I ++I P+L + +L Q I + LW IGEY
Sbjct: 432 PDEVPSNLI-------QLISSTPELSSYAVQKLYLALKQDITQQPLTQVGLWCIGEY 481
>sp|P54362|AP3D_DROME AP-3 complex subunit delta OS=Drosophila melanogaster GN=g PE=1
SV=4
Length = 1034
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 102/478 (21%), Positives = 204/478 (42%), Gaps = 51/478 (10%)
Query: 21 EIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI 80
EIK+ L +++ K +A+ K + + G + I+ V+ S T +++ L
Sbjct: 43 EIKQELRQDNISVKCNAVAKLTYIQMLGYDISWAGFNIIE-VMSSSRFTCKRIGYLAASQ 101
Query: 81 IDKTDAKGRVLPEMILICQNL-RNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQN 139
D+ E++++ N+ R +L N+Y GV L L ++ L ++
Sbjct: 102 CFHPDS------ELLMLTTNMIRKDLNSQNQYDAGVALSGLSCFISPDLSRDLANDIMTL 155
Query: 140 LQHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLFTCD 199
+ PY+R A+L + ++ L E L P++ EK+ + DP + A ++
Sbjct: 156 MSSTKPYLRMKAVLMMYKVF-LRYPEALRPAFPKLKEKL--EDPDPGVQSAAVNVICELA 212
Query: 200 QDRAINYLLTH-------VDRVSEWGELLQMVVLELIRKVCRTNKGEKGKYIKIIISLLN 252
+ NYL + W + + +++L + K I+ + +L++
Sbjct: 213 RKNPKNYLPLAPIFFKLMTTSTNNW---MLIKIIKLFGALTPLEPRLGKKLIEPLTNLIH 269
Query: 253 APST-AVIYECAGT----LVSLSSAPTAIRAAANTYSQ---LLLSQSDNNVKLIVLDRLN 304
+ S +++YEC T L+S+SS A+ Q +L+ SD N+K + L ++
Sbjct: 270 STSAMSLLYECINTVIAVLISISSGMPNHSASIQLCVQKLRILIEDSDQNLKYLGLLAMS 329
Query: 305 ELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINEVVLMLKKEVVKTQ 364
++ +H + +L L+ + IR + LD++ +++ +N+ E+VK
Sbjct: 330 KILKTHPKSVQAHKDLILACLDDKDESIRLRALDLLYGMVSKKNL--------MEIVKRL 381
Query: 365 SGELEK--NGEYR-QMLIQAIHSCA-------IKFPEVASTVVHLLMDFLGDSNVASAID 414
G +E+ YR ++L + I CA F + +V L+ G + +
Sbjct: 382 LGHMERAEGSAYRDELLYKVIEICAQSSYLYVTNFEWYLTVLVELIQLEAGSRHGRLIAE 441
Query: 415 VIIFVREIIEMNPKLRVSIITRLLDNFYQIRAA----RVCTCALWIIGEYCQSLSEVE 468
++ V + + + V+ +T LLD F + V A WI+GE+ L + E
Sbjct: 442 QLLDVAIRVPVVRQFAVNEMTNLLDTFTVSAQSNSMYEVLYAAAWIVGEFAGELEDAE 499
>sp|Q6Z382|COPG2_ORYSJ Coatomer subunit gamma-2 OS=Oryza sativa subsp. japonica
GN=Os07g0201100 PE=2 SV=1
Length = 889
Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 86/407 (21%), Positives = 183/407 (44%), Gaps = 45/407 (11%)
Query: 38 MKKAIMLLLNGETLPQLFITIVRY----VLPSEDHTIQKLLLLYL-EIIDKTDAKGRVLP 92
+ K + LL G+T ++ T V + + S+D +++++ L + E+ D
Sbjct: 51 ITKLLYLLNQGDTFTKVEATEVFFATTKLFQSKDAGLRRMVYLMIKELSPSAD------- 103
Query: 93 EMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNLQHRHPYIRRNAI 152
E+I++ +L ++ + R +R LCR+ ++ ++ + + Q + ++P + A+
Sbjct: 104 EVIIVTSSLMKDMNSKTDMYRANAIRVLCRIIDSTLLTQIERYLKQAIVDKNPVVASAAL 163
Query: 153 LAVMAIYKLPQGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLFTC-------DQDR-AI 204
V IY LL +PE++++ + Q+ R A + DR A+
Sbjct: 164 --VSGIY-------LLQTSPEVVKRWSNEVQEAVQSRAALVQFHALALLHQIRQNDRLAV 214
Query: 205 NYLLTHVDRVSEWGELLQMVVL----ELIRKVCRTNKGEKGKYIKIIISLLNAPSTAVIY 260
+ L+T + R S L Q +++ ++IR+ ++G + + S L + VI
Sbjct: 215 SKLVTSLTRGSVRSPLAQCLLIRYTSQVIRESSMNSQGGDRPFFDFLESCLRNKAEMVIL 274
Query: 261 ECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLIVLDRLNELRSSHRDIMVDLIMD 320
E A + L+ + A T QL LS S ++ + LN++ S+H + + +D
Sbjct: 275 EAARAITELNGVTSRELTPAITVLQLFLSSSKPVLRFAAVRTLNKVASTHPLAVTNCNID 334
Query: 321 VLRALNSPNLDIRRKTLDIVLELITPRNINEVVLMLKKEVVKTQSGELEKNGEYRQMLIQ 380
+ ++ N I + +L+ +++ L K++ S + E++ ++++
Sbjct: 335 MESLISDQNRSIATLAITTLLKTGNESSVDR----LMKQMTNFMS---DIADEFKIVVVE 387
Query: 381 AIHSCAIKFPEVASTVVHLLMDFL---GDSNVASAI--DVIIFVREI 422
AI S +KFP ++++ L + L G AI +II +R+I
Sbjct: 388 AIRSLCLKFPLKYRSLMNFLSNILREEGGFEYKKAIVDSIIILIRDI 434
>sp|O43005|AP2B_SCHPO AP-2 complex subunit beta OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=apl1 PE=3 SV=1
Length = 677
Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 96/466 (20%), Positives = 200/466 (42%), Gaps = 47/466 (10%)
Query: 34 KVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEI---IDKTDAKGRV 90
++ A+KKAI + G + LF +++ + S + ++KL LYL+I + T+AK V
Sbjct: 31 RISALKKAIAGISYGYDMSSLFPSVIS-SMESNNLELKKLCYLYLKIYASVKPTEAKRAV 89
Query: 91 LPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNLQHRHPYIRRN 150
++IL N++ N IR + LR L +N + +++ L PY+R+
Sbjct: 90 --KLIL------NDIYSSNPMIRSLALRTLTSVNIKNFWVAAMDPIVRLLDDTDPYVRKT 141
Query: 151 AILAVMAIYKLPQGEQLLVDAPEMIEKVLSTEQDPS----AKRNAFLM-------LFTCD 199
A + + +Y ++ +V++ +I+ + D S A A LM F
Sbjct: 142 AAIGIAKLYSY---DKKMVESSGLIDHLKEMLSDESSVVVANSLAALMNIVNSSTGFKLT 198
Query: 200 QDRAI-NYLLTHVDRVSEWGELLQMVVLELIRKVCRTNKGEKGKYIKIIISLLNAPSTAV 258
R I N L+ + SEW LQ+ +L+ + GE + + I L + AV
Sbjct: 199 FSREISNKLVKSLTDCSEW---LQVAILDALIFYVPQKPGEAESFAERISPWLQHGNAAV 255
Query: 259 IYECAGTLVSLSSAPTAIRAAANTYSQL------LLSQSDNNVKLIVLDRLNELRSSHRD 312
++ L++ + + LL++ + + ++L + + +
Sbjct: 256 CMGAVKVILYLTNYMKDDNRVKEYFMKTQPPLVTLLARKSSATQYVILRNIQIILEQCPE 315
Query: 313 IMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINEVVLMLKKEVVKTQSGELEKNG 372
+ + I + P + ++ + LDI+ ++ N+++++ E V+ S E +
Sbjct: 316 MFANDIHFFYCNFDDP-IYVKLEKLDILTKIADIHNLDQIL----PEFVEYAS---EIDV 367
Query: 373 EYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVIIFVREIIEMNPKLRVS 432
E + ++ I AIK E + + L++ + + +I +R+I+ P S
Sbjct: 368 ELVRKSVKCIGYLAIKIEERKNDCIDSLIELMNTKVTYVIQEAVIVIRDILRKYPGSYKS 427
Query: 433 IITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEVENGIATIKQCL 478
++ L +N + + +WI+G+Y + E+E+ I + L
Sbjct: 428 LVPILYENLDSLDEPDAKSAVIWILGQYAE---EIEDSITLLNDYL 470
>sp|Q8L7A9|AP4E_ARATH AP-4 complex subunit epsilon OS=Arabidopsis thaliana GN=At1g31730
PE=1 SV=1
Length = 938
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 122/295 (41%), Gaps = 50/295 (16%)
Query: 94 MILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNLQHRHPYIRRNAIL 153
+ILI ++ +L+ N + L +CRL E I ++P V++ L H+ +R+ AI+
Sbjct: 120 IILIVNTIQKDLRSDNYLVVCAALNAICRLINEETIPAVLPQVVELLNHQKEAVRKKAIM 179
Query: 154 AVMAIYKLPQGEQLLVDAPEMIEKVLST------EQDPSAKRNAFLMLFTCDQDRAINYL 207
A+ ++ +P + ++S + DP LF + +Y
Sbjct: 180 ALHRFHR---------KSPSSVSHLVSNFRKRLCDNDPGVMGATLCPLFDLISEDVNSY- 229
Query: 208 LTHVDRVSEWGELLQMVV-------------------LELIRKVCRTNKGEK-------- 240
D VS + +L+ V ++L++ + G+K
Sbjct: 230 ---KDLVSSFVSILKQVTERRLPKSYDYHQMPAPFIQIKLLKIMALLGSGDKNASDIMSM 286
Query: 241 --GKYIKIIISLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQSDNNVKLI 298
G + S N A++YEC + + P + AAA+ S+ L S S +N+K +
Sbjct: 287 VLGDLFRKCDSSTNI-GNAILYECIRCISCILPNPKLLEAAADAISKFLKSDS-HNLKYM 344
Query: 299 VLDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINEVV 353
+D L L DI + V+ L P+ ++RKT +++ ++ N+ +V
Sbjct: 345 GIDGLGRLIKISPDIAEQHQLAVIDCLEDPDDTLKRKTFELLYKMTKSSNVEVIV 399
>sp|Q54R84|AP4B_DICDI AP-4 complex subunit beta OS=Dictyostelium discoideum GN=ap4b1 PE=3
SV=1
Length = 838
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 107/232 (46%), Gaps = 25/232 (10%)
Query: 18 IANEIKEALEGNDVPAKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLY 77
I N + A+ + D +++ I + G + LF ++ V S D I+KL+ LY
Sbjct: 27 IKNNLSTAINERNADKIKDILQRIIYYMTIGMDVSVLFPDVIM-VASSNDIIIKKLVYLY 85
Query: 78 LEIIDKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSV 136
+ K++ P+++L+ N LR + N IRG+ LR LC L+ +E +
Sbjct: 86 IVHYSKSN------PDLLLLVVNTLRRDCIDRNPIIRGLALRSLCSLDSKNTLEYATIEI 139
Query: 137 LQNLQHRHPYIRRNAILAVMAIYKLP-QGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLML 195
++L Y+R+ A+L + +Y L + L + P++ + ++ +QDP NA L
Sbjct: 140 NRSLTDFSGYVRKTALLGLAKLYHLSKEAFDLDIIIPKIFDMIM--DQDPQVIVNAVSTL 197
Query: 196 --------FTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNKGE 239
FT D + +L+ +EW Q ++LE + + +++ E
Sbjct: 198 NEIKPGWSFTFD---LVQHLMIKFKEFNEWS---QCIILECLSRYTPSSEDE 243
>sp|Q9LDK9|APBLA_ARATH Beta-adaptin-like protein A OS=Arabidopsis thaliana GN=BETAA-AD
PE=1 SV=1
Length = 841
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 91/474 (19%), Positives = 189/474 (39%), Gaps = 55/474 (11%)
Query: 26 LEGNDVP----AKVDAMKKAIMLLLNGETLPQLFITIVRYVLPSEDHTIQKLLLLYLEII 81
L G+ P +K D KK I + G + +F +V + D ++K+ LY+
Sbjct: 32 LAGSRAPGVDDSKRDLYKKVISYMTIGIDVSSVFGEMVM-CSATSDIVLKKMCYLYV--- 87
Query: 82 DKTDAKGRVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSVLQNL 140
AKG P++ L+ N L+ + + + IRG+ LR LC L ++E L+ + L
Sbjct: 88 -GNYAKGN--PDLSLLTINFLQRDCKDEDPMIRGLALRSLCSLRVPNLVEYLVGPLGSGL 144
Query: 141 QHRHPYIRRNAILAVMAIYKLPQGEQLLVDAPEMIEKVLSTEQDPSAKRNAFLMLF---- 196
+ + Y+R A+ V+ +Y + + D P ++ ++ + D N L
Sbjct: 145 KDNNSYVRTIAVTGVLKLYHISPSTCIDADFPATLKSLMLHDSDAQVVANCLSALQEIWS 204
Query: 197 --------TCDQDRA------INYLLTHVDRVSEWGELLQMVVLELIRKVCRTNKGEKGK 242
C + + I Y L + +EW Q ++LEL K ++ +
Sbjct: 205 LEASHSEEACREKESLLSKPVIYYFLNRIKEFNEWA---QCLILELAVKYVPSDSNDIFD 261
Query: 243 YIKIIISLLNAPSTAVIYECAGTLVSLSSAPTAIRAAANTYSQL------LLSQSDNNVK 296
+ ++ L + AV+ + L+ + T + Y ++ L+S
Sbjct: 262 IMNLLEDRLQHANGAVVLATVKVFLQLTLSMTDVH--QQVYERIKSPLLTLVSSGSPEQS 319
Query: 297 LIVLDRLNELRSSHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLELITPRNINEVVLML 356
+L L+ L I N P+ +++ L+++ + N E+V L
Sbjct: 320 YAILSHLHLLVVRAPFIFAADYKHFYCQYNEPSY-VKKLKLEMLTAVANESNTYEIVTEL 378
Query: 357 KKEVVKTQSGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVI 416
+ ++ I+A+ A++ +V + +V L+ FL + +
Sbjct: 379 CEYAANVDIAIARES-------IRAVGKIALQQYDV-NAIVDRLLQFLEMEKDYVTAETL 430
Query: 417 IFVREIIEMNPKLR---VSIITRLLDNFYQIRAARVCTCALWIIGEYCQSLSEV 467
+ V++++ P+ +S++ + I+ + +W++GEY Q +S+
Sbjct: 431 VLVKDLLRKYPQWSHDCISVVGGISSK--NIQEPKAKAALIWMLGEYAQDMSDA 482
>sp|Q9ZUI6|AP1G2_ARATH AP-1 complex subunit gamma-2 OS=Arabidopsis thaliana GN=At1g60070
PE=2 SV=2
Length = 862
Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 101/427 (23%), Positives = 176/427 (41%), Gaps = 63/427 (14%)
Query: 77 YLEIIDKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNETEIIEPLIPSV 136
YL ++ D + VL +L+ +L+ +L H N+YI G+ L L + E+ L P V
Sbjct: 89 YLGLMLLLDERQEVL---MLVTNSLKQDLNHTNQYIVGLALCALGNICSAEMARDLAPEV 145
Query: 137 LQNLQHRHPYIRRNAIL-AVMAIYKLPQ--------GEQLLVDAPE--MIEKV------- 178
+ LQ R P IR+ A L A+ I K+P G LL + +I V
Sbjct: 146 ERLLQFRDPNIRKKAALCAIRIIRKVPDLSENFINPGAALLKEKHHGVLITGVHLCTEIC 205
Query: 179 -LSTEQDPSAKRNAFLMLFTCDQDRAINYLLTHVDRVSEWGELLQMVVLELIRKVCRTNK 237
+S+E ++ L +D A + D L + +L+L+R + + +
Sbjct: 206 KVSSEALEYFRKKCTEGLVKTLRDIANSPYSPEYDVAGITDPFLHIRLLKLLRVLGQGDA 265
Query: 238 GEKGKYIKIIISLLNAPST------AVIYECAGTLVSLSSAPTAIRAAANTYSQLLLSQS 291
I+ + + + A++YEC T++S+ +R A LS
Sbjct: 266 DASDCMNDILAQVASKTESNKNAGNAILYECVQTIMSIEEN-GGLRVLAINILGKFLSNR 324
Query: 292 DNNVKLIVLDRLNELRS---------SHRDIMVDLIMDVLRALNSPNLDIRRKTLDIVLE 342
DNN++ + L+ L +RS HR +++ + D + I+++ L+++
Sbjct: 325 DNNIRYVALNML--MRSLTVDSQAVQRHRATILECVKD-------SDASIQKRALELIYL 375
Query: 343 LITPRNINEVVLMLKKEVVKTQSGELE-KNGEYRQMLIQAIHSCAIKFPEVASTVVHLLM 401
L+ N+ L KE+++ LE +++ L I S KF + ++
Sbjct: 376 LVNENNVKP----LAKELIEY----LEVSEQDFKGDLTAKICSIVEKFAPEKIWYIDQML 427
Query: 402 DFLGDSNVASAIDVIIFVREIIEMNPKLR---VSIITRLLD-NFYQIRAARVCTCALWII 457
L ++ DV + +I P L V + R L +F Q RV A+W I
Sbjct: 428 KVLSEAGTYVKEDVWHALIVVITNAPDLHGYTVRALYRALHTSFEQETLVRV---AIWCI 484
Query: 458 GEYCQSL 464
GEY L
Sbjct: 485 GEYADLL 491
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 323,752,567
Number of Sequences: 539616
Number of extensions: 13086810
Number of successful extensions: 37276
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 36977
Number of HSP's gapped (non-prelim): 155
length of query: 949
length of database: 191,569,459
effective HSP length: 127
effective length of query: 822
effective length of database: 123,038,227
effective search space: 101137422594
effective search space used: 101137422594
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)