Query 002236
Match_columns 949
No_of_seqs 577 out of 3541
Neff 6.0
Searched_HMMs 13730
Date Mon Mar 25 18:08:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002236.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/002236hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1v43a3 c.37.1.12 (A:7-245) Hy 100.0 2.2E-59 1.6E-63 495.0 26.7 222 626-856 6-229 (239)
2 d1g2912 c.37.1.12 (1:1-240) Ma 100.0 7.8E-59 5.7E-63 491.4 28.3 224 626-857 3-233 (240)
3 d2awna2 c.37.1.12 (A:4-235) Ma 100.0 3.8E-59 2.8E-63 491.5 24.3 220 627-855 1-222 (232)
4 d3dhwc1 c.37.1.12 (C:1-240) Me 100.0 4.7E-58 3.4E-62 485.4 25.4 229 626-858 1-235 (240)
5 d1vpla_ c.37.1.12 (A:) Putativ 100.0 2.3E-57 1.7E-61 481.0 30.0 224 626-857 2-226 (238)
6 d3d31a2 c.37.1.12 (A:1-229) Su 100.0 1.5E-57 1.1E-61 478.1 27.9 217 626-855 1-219 (229)
7 d1oxxk2 c.37.1.12 (K:1-242) Gl 100.0 4.6E-58 3.4E-62 485.3 24.0 224 626-855 3-232 (242)
8 d1ji0a_ c.37.1.12 (A:) Branche 100.0 1.7E-55 1.3E-59 467.2 27.6 221 624-853 4-228 (240)
9 d1b0ua_ c.37.1.12 (A:) ATP-bin 100.0 2.5E-55 1.8E-59 470.2 28.8 224 626-856 2-241 (258)
10 d1l2ta_ c.37.1.12 (A:) MJ0796 100.0 3.3E-55 2.4E-59 461.1 27.7 219 626-848 1-229 (230)
11 d1g6ha_ c.37.1.12 (A:) MJ1267 100.0 3.5E-54 2.6E-58 460.9 24.8 222 625-854 3-240 (254)
12 d2onka1 c.37.1.12 (A:1-240) Mo 100.0 2.6E-53 1.9E-57 448.1 24.9 214 626-854 2-217 (240)
13 d1mv5a_ c.37.1.12 (A:) Multidr 100.0 7.6E-51 5.6E-55 431.9 19.0 217 626-854 1-227 (242)
14 d1jj7a_ c.37.1.12 (A:) Peptide 100.0 7E-50 5.1E-54 426.6 25.8 224 625-856 10-243 (251)
15 d2pmka1 c.37.1.12 (A:467-707) 100.0 7.4E-50 5.4E-54 423.8 25.4 218 627-856 2-229 (241)
16 d3b60a1 c.37.1.12 (A:329-581) 100.0 6.5E-49 4.8E-53 419.6 27.7 220 626-856 13-242 (253)
17 d2hyda1 c.37.1.12 (A:324-578) 100.0 7.4E-49 5.4E-53 419.1 23.4 219 626-856 16-244 (255)
18 d1l7vc_ c.37.1.12 (C:) ABC tra 100.0 9.6E-47 7E-51 397.9 19.1 209 626-852 3-220 (231)
19 d1sgwa_ c.37.1.12 (A:) Putativ 100.0 5.6E-44 4.1E-48 368.9 22.0 194 626-839 2-197 (200)
20 d1r0wa_ c.37.1.12 (A:) Cystic 100.0 1E-43 7.4E-48 384.6 18.3 189 645-854 49-247 (281)
21 g1f2t.1 c.37.1.12 (A:,B:) Rad5 99.8 1.3E-20 9.3E-25 198.8 8.2 84 759-843 195-287 (292)
22 d1ye8a1 c.37.1.11 (A:1-178) Hy 99.6 4.4E-18 3.2E-22 167.5 -5.6 152 661-846 3-161 (178)
23 d1e69a_ c.37.1.12 (A:) Smc hea 99.2 1.3E-10 9.6E-15 123.3 16.9 79 761-840 215-299 (308)
24 g1ii8.1 c.37.1.12 (A:,B:) Rad5 99.1 3.9E-11 2.8E-15 126.6 9.3 80 760-840 273-361 (369)
25 g1xew.1 c.37.1.12 (X:,Y:) Smc 98.9 7.6E-09 5.6E-13 110.4 16.3 76 762-838 221-300 (329)
26 d1w1wa_ c.37.1.12 (A:) Smc hea 98.6 5.8E-08 4.2E-12 106.2 10.4 77 760-837 327-408 (427)
27 d1ewqa2 c.37.1.12 (A:542-765) 98.1 8.1E-06 5.9E-10 83.4 12.0 56 773-828 104-161 (224)
28 d1wb9a2 c.37.1.12 (A:567-800) 98.0 1.7E-05 1.2E-09 81.5 12.1 55 774-828 111-168 (234)
29 g1ii8.1 c.37.1.12 (A:,B:) Rad5 96.9 0.00031 2.2E-08 72.5 5.5 32 647-679 13-44 (369)
30 d1qhla_ c.37.1.12 (A:) Cell di 96.7 4.8E-05 3.5E-09 72.7 -3.2 35 647-682 14-48 (222)
31 d1yj5a2 c.37.1.1 (A:351-522) 5 96.2 0.0095 6.9E-07 57.2 10.6 43 785-829 66-108 (172)
32 d1np6a_ c.37.1.10 (A:) Molybdo 96.2 0.00059 4.3E-08 64.0 1.5 24 660-683 4-27 (170)
33 d1cr2a_ c.37.1.11 (A:) Gene 4 96.2 0.0072 5.2E-07 61.6 10.2 35 645-679 22-56 (277)
34 d1j8yf2 c.37.1.10 (F:87-297) G 96.2 0.0055 4E-07 61.3 8.9 98 657-799 11-108 (211)
35 d1u0la2 c.37.1.8 (A:69-293) Pr 96.2 0.0014 1E-07 66.4 4.2 34 657-690 94-127 (225)
36 d1znwa1 c.37.1.1 (A:20-201) Gu 96.1 0.0013 9.7E-08 63.4 3.4 26 658-683 2-27 (182)
37 d2i3ba1 c.37.1.11 (A:1-189) Ca 95.9 0.00067 4.9E-08 63.8 0.3 36 660-695 3-38 (189)
38 d1nlfa_ c.37.1.11 (A:) Hexamer 95.8 0.033 2.4E-06 56.1 13.2 47 778-824 127-180 (274)
39 d1knqa_ c.37.1.17 (A:) Glucona 95.8 0.0022 1.6E-07 60.1 3.3 27 656-682 4-30 (171)
40 d1w1wa_ c.37.1.12 (A:) Smc hea 95.6 0.0032 2.3E-07 67.5 4.3 28 652-679 19-46 (427)
41 d1t9ha2 c.37.1.8 (A:68-298) Pr 95.6 0.0013 9.5E-08 66.9 0.9 34 657-690 96-129 (231)
42 d1zp6a1 c.37.1.25 (A:6-181) Hy 95.5 0.0032 2.3E-07 59.0 3.6 26 657-682 3-28 (176)
43 d1xjca_ c.37.1.10 (A:) Molybdo 95.5 0.0019 1.4E-07 61.1 1.8 26 659-684 2-27 (165)
44 d1sxje2 c.37.1.20 (E:4-255) Re 95.4 0.0067 4.9E-07 60.6 5.6 43 782-825 130-172 (252)
45 d1m8pa3 c.37.1.15 (A:391-573) 95.3 0.0039 2.9E-07 58.2 3.4 27 656-682 4-30 (183)
46 d1mkya2 c.37.1.8 (A:173-358) P 95.3 0.0064 4.7E-07 58.0 4.9 23 660-682 10-32 (186)
47 d1ls1a2 c.37.1.10 (A:89-295) G 95.2 0.099 7.2E-06 51.6 13.6 26 657-682 9-34 (207)
48 d1tf7a2 c.37.1.11 (A:256-497) 95.0 0.049 3.6E-06 53.7 10.8 26 655-680 23-48 (242)
49 d1svia_ c.37.1.8 (A:) Probable 95.0 0.0043 3.2E-07 60.0 2.6 23 660-682 25-47 (195)
50 d1s96a_ c.37.1.1 (A:) Guanylat 94.9 0.0062 4.5E-07 60.4 3.6 26 657-682 1-26 (205)
51 d2qy9a2 c.37.1.10 (A:285-495) 94.8 0.11 7.8E-06 51.6 12.6 24 659-682 10-33 (211)
52 d1khta_ c.37.1.1 (A:) Adenylat 94.7 0.0079 5.8E-07 56.3 3.5 25 659-683 2-26 (190)
53 d1y63a_ c.37.1.1 (A:) Probable 94.7 0.0081 5.9E-07 56.1 3.5 27 656-682 3-29 (174)
54 d1yrba1 c.37.1.10 (A:1-244) AT 94.6 0.0072 5.2E-07 59.7 3.2 21 660-680 2-22 (244)
55 d1okkd2 c.37.1.10 (D:97-303) G 94.6 0.007 5.1E-07 60.3 3.0 58 657-735 5-62 (207)
56 d1qhxa_ c.37.1.3 (A:) Chloramp 94.5 0.0098 7.2E-07 55.3 3.6 26 658-683 3-28 (178)
57 d1lw7a2 c.37.1.1 (A:220-411) T 94.4 0.0083 6E-07 56.0 3.0 23 660-682 9-31 (192)
58 d1ly1a_ c.37.1.1 (A:) Polynucl 94.4 0.0097 7E-07 54.5 3.3 34 659-695 3-36 (152)
59 d1egaa1 c.37.1.8 (A:4-182) GTP 94.2 0.011 7.7E-07 55.8 3.3 22 660-681 7-28 (179)
60 d2cxxa1 c.37.1.8 (A:2-185) GTP 94.2 0.0089 6.5E-07 56.6 2.6 21 661-681 3-23 (184)
61 d1mkya1 c.37.1.8 (A:2-172) Pro 94.2 0.011 8.4E-07 55.6 3.4 23 660-682 2-24 (171)
62 d2qtvb1 c.37.1.8 (B:24-189) SA 94.2 0.015 1.1E-06 53.0 4.1 21 661-681 3-23 (166)
63 d1kaga_ c.37.1.2 (A:) Shikimat 94.2 0.011 7.8E-07 53.9 3.0 23 660-682 4-26 (169)
64 d1lnza2 c.37.1.8 (A:158-342) O 94.2 0.0074 5.4E-07 57.6 1.9 21 661-681 4-24 (185)
65 d1rz3a_ c.37.1.6 (A:) Hypothet 94.1 0.01 7.6E-07 56.3 3.0 24 660-683 24-47 (198)
66 d1f6ba_ c.37.1.8 (A:) SAR1 {Ch 94.1 0.0087 6.3E-07 56.1 2.3 24 660-683 15-38 (186)
67 d2bdta1 c.37.1.25 (A:1-176) Hy 94.0 0.013 9.5E-07 54.1 3.2 32 659-693 3-34 (176)
68 d1udxa2 c.37.1.8 (A:157-336) O 93.8 0.01 7.4E-07 56.4 2.1 22 661-682 4-25 (180)
69 d1wf3a1 c.37.1.8 (A:3-180) GTP 93.8 0.015 1.1E-06 55.2 3.3 23 660-682 7-29 (178)
70 d1x6va3 c.37.1.4 (A:34-228) Ad 93.7 0.01 7.3E-07 56.5 1.9 26 657-682 18-43 (195)
71 d1rkba_ c.37.1.1 (A:) Adenylat 93.6 0.015 1.1E-06 53.9 3.0 20 661-680 7-26 (173)
72 d1gkya_ c.37.1.1 (A:) Guanylat 93.5 0.016 1.1E-06 56.0 3.0 22 661-682 4-25 (186)
73 d1njfa_ c.37.1.20 (A:) delta p 93.4 0.076 5.5E-06 52.9 8.2 42 784-826 116-157 (239)
74 d1nrjb_ c.37.1.8 (B:) Signal r 93.2 0.018 1.3E-06 55.5 2.9 22 660-681 5-26 (209)
75 d1r7ra3 c.37.1.20 (A:471-735) 93.2 0.046 3.3E-06 55.9 6.2 24 659-682 42-65 (265)
76 d1ksha_ c.37.1.8 (A:) ADP-ribo 93.1 0.026 1.9E-06 52.5 3.8 22 661-682 5-26 (165)
77 d1lvga_ c.37.1.1 (A:) Guanylat 93.1 0.021 1.5E-06 55.4 3.0 21 661-681 3-23 (190)
78 d1kgda_ c.37.1.1 (A:) Guanylat 92.9 0.026 1.9E-06 54.3 3.5 23 659-681 4-26 (178)
79 d1uj2a_ c.37.1.6 (A:) Uridine- 92.9 0.024 1.7E-06 55.3 3.2 23 660-682 4-26 (213)
80 d1r8sa_ c.37.1.8 (A:) ADP-ribo 92.9 0.021 1.5E-06 52.1 2.6 22 661-682 3-24 (160)
81 d3adka_ c.37.1.1 (A:) Adenylat 92.9 0.02 1.5E-06 55.2 2.6 28 655-682 5-32 (194)
82 d1vmaa2 c.37.1.10 (A:82-294) G 92.8 0.021 1.6E-06 57.0 2.8 106 656-806 9-114 (213)
83 d1nksa_ c.37.1.1 (A:) Adenylat 92.8 0.024 1.7E-06 53.2 3.0 24 660-683 3-26 (194)
84 d1upta_ c.37.1.8 (A:) ADP-ribo 92.8 0.022 1.6E-06 52.3 2.6 22 661-682 8-29 (169)
85 d1a5ta2 c.37.1.20 (A:1-207) de 92.8 0.072 5.2E-06 52.2 6.7 42 783-825 108-149 (207)
86 d1qf9a_ c.37.1.1 (A:) UMP/CMP 92.7 0.027 1.9E-06 54.1 3.2 25 657-681 5-29 (194)
87 d1n0wa_ c.37.1.11 (A:) DNA rep 92.6 0.035 2.5E-06 52.4 3.9 27 654-680 19-45 (242)
88 d2gj8a1 c.37.1.8 (A:216-376) P 92.6 0.028 2.1E-06 51.9 3.2 23 660-682 3-25 (161)
89 d1viaa_ c.37.1.2 (A:) Shikimat 92.5 0.028 2.1E-06 52.7 3.0 22 661-682 3-24 (161)
90 d1ukza_ c.37.1.1 (A:) Uridylat 92.3 0.033 2.4E-06 53.6 3.4 26 657-682 7-32 (196)
91 d1puia_ c.37.1.8 (A:) Probable 92.3 0.017 1.2E-06 54.2 1.2 23 660-682 18-40 (188)
92 d1wb1a4 c.37.1.8 (A:1-179) Elo 92.1 0.031 2.3E-06 53.3 2.9 22 661-682 8-29 (179)
93 d1e6ca_ c.37.1.2 (A:) Shikimat 91.9 0.034 2.4E-06 52.4 2.8 21 661-681 5-25 (170)
94 d2fh5b1 c.37.1.8 (B:63-269) Si 91.7 0.033 2.4E-06 53.9 2.6 22 660-681 2-23 (207)
95 d1bifa1 c.37.1.7 (A:37-249) 6- 91.6 0.043 3.1E-06 52.6 3.3 23 660-682 4-26 (213)
96 d1gvnb_ c.37.1.21 (B:) Plasmid 91.6 0.035 2.5E-06 55.4 2.7 33 659-693 33-65 (273)
97 d1g6oa_ c.37.1.11 (A:) Hexamer 91.6 0.034 2.5E-06 58.8 2.7 41 652-692 160-200 (323)
98 d1uf9a_ c.37.1.1 (A:) Dephosph 91.5 0.04 2.9E-06 52.7 2.9 21 660-680 5-25 (191)
99 d1xzpa2 c.37.1.8 (A:212-371) T 91.4 0.014 9.9E-07 54.1 -0.7 21 661-681 3-23 (160)
100 d1teva_ c.37.1.1 (A:) UMP/CMP 91.4 0.047 3.4E-06 52.2 3.3 22 660-681 3-24 (194)
101 d2a5yb3 c.37.1.20 (B:109-385) 91.3 0.77 5.6E-05 46.5 12.9 22 658-679 44-65 (277)
102 d1zj6a1 c.37.1.8 (A:2-178) ADP 91.3 0.042 3.1E-06 51.2 2.8 23 660-682 17-39 (177)
103 d2iyva1 c.37.1.2 (A:2-166) Shi 91.3 0.046 3.3E-06 51.2 3.0 22 661-682 4-25 (165)
104 d1nn5a_ c.37.1.1 (A:) Thymidyl 91.2 0.05 3.6E-06 53.6 3.3 27 656-682 1-27 (209)
105 d1ak2a1 c.37.1.1 (A:14-146,A:1 91.1 0.035 2.5E-06 53.1 2.0 25 656-680 1-25 (190)
106 d2erxa1 c.37.1.8 (A:6-176) di- 91.1 0.08 5.9E-06 49.3 4.6 28 661-688 5-37 (171)
107 d1h65a_ c.37.1.8 (A:) Chloropl 91.0 0.045 3.3E-06 55.7 2.8 22 661-682 35-56 (257)
108 d1zd9a1 c.37.1.8 (A:18-181) AD 91.0 0.045 3.3E-06 50.9 2.6 20 661-680 5-24 (164)
109 d1g7sa4 c.37.1.8 (A:1-227) Ini 91.0 0.047 3.4E-06 54.3 2.9 22 660-681 7-28 (227)
110 d1zaka1 c.37.1.1 (A:3-127,A:15 90.7 0.05 3.6E-06 52.0 2.7 21 660-680 5-25 (189)
111 d2p67a1 c.37.1.10 (A:1-327) LA 90.7 0.034 2.5E-06 58.9 1.5 26 658-683 54-79 (327)
112 d2erya1 c.37.1.8 (A:10-180) r- 90.6 0.082 6E-06 49.4 4.0 30 661-690 8-42 (171)
113 d2vp4a1 c.37.1.1 (A:12-208) De 90.5 0.048 3.5E-06 52.1 2.3 24 659-682 10-33 (197)
114 d1xtqa1 c.37.1.8 (A:3-169) GTP 90.4 0.096 7E-06 48.7 4.4 21 660-680 6-26 (167)
115 d1xp8a1 c.37.1.11 (A:15-282) R 90.4 0.26 1.9E-05 50.4 8.1 42 654-695 53-95 (268)
116 d1zina1 c.37.1.1 (A:1-125,A:16 90.3 0.063 4.6E-06 50.4 3.0 22 661-682 3-24 (182)
117 d4tmka_ c.37.1.1 (A:) Thymidyl 90.3 0.069 5E-06 51.9 3.4 26 657-682 1-26 (210)
118 d1m7ga_ c.37.1.4 (A:) Adenosin 90.2 0.071 5.2E-06 52.5 3.4 41 656-696 22-64 (208)
119 d1ckea_ c.37.1.1 (A:) CMP kina 90.2 0.07 5.1E-06 51.4 3.3 22 660-681 5-26 (225)
120 d1azta2 c.37.1.8 (A:35-65,A:20 90.0 0.061 4.4E-06 53.1 2.7 28 660-687 8-36 (221)
121 d1ky3a_ c.37.1.8 (A:) Rab-rela 90.0 0.079 5.7E-06 49.5 3.4 21 661-681 5-25 (175)
122 d1iqpa2 c.37.1.20 (A:2-232) Re 89.9 0.071 5.2E-06 52.4 3.1 43 783-826 109-151 (231)
123 d1fzqa_ c.37.1.8 (A:) ADP-ribo 89.8 0.067 4.9E-06 50.0 2.7 21 661-681 19-39 (176)
124 d1sq5a_ c.37.1.6 (A:) Pantothe 89.8 0.047 3.4E-06 57.3 1.7 24 660-683 82-105 (308)
125 d1ctqa_ c.37.1.8 (A:) cH-p21 R 89.8 0.078 5.7E-06 49.3 3.1 21 661-681 6-26 (166)
126 d2gnoa2 c.37.1.20 (A:11-208) g 89.8 0.29 2.1E-05 47.6 7.5 43 782-825 78-120 (198)
127 d1s3ga1 c.37.1.1 (A:1-125,A:16 89.6 0.083 6E-06 50.0 3.2 22 661-682 3-24 (182)
128 d1p5zb_ c.37.1.1 (B:) Deoxycyt 89.6 0.058 4.2E-06 52.9 2.1 27 657-683 1-27 (241)
129 d3raba_ c.37.1.8 (A:) Rab3a {R 89.6 0.07 5.1E-06 49.9 2.6 20 661-680 8-27 (169)
130 d2f9la1 c.37.1.8 (A:8-182) Rab 89.5 0.088 6.4E-06 49.5 3.3 20 661-680 7-26 (175)
131 d1jjva_ c.37.1.1 (A:) Dephosph 89.5 0.083 6.1E-06 51.4 3.2 21 660-680 4-24 (205)
132 d1svsa1 c.37.1.8 (A:32-60,A:18 89.4 0.081 5.9E-06 49.7 2.9 29 661-689 5-33 (195)
133 d1ek0a_ c.37.1.8 (A:) Ypt51 {B 89.3 0.15 1.1E-05 47.5 4.7 27 661-687 6-37 (170)
134 d1tmka_ c.37.1.1 (A:) Thymidyl 89.3 0.089 6.5E-06 51.7 3.3 28 657-684 2-29 (214)
135 d1q3ta_ c.37.1.1 (A:) CMP kina 89.3 0.088 6.4E-06 51.1 3.2 23 660-682 5-27 (223)
136 d1szpa2 c.37.1.11 (A:145-395) 89.3 0.098 7.1E-06 50.8 3.5 26 654-679 30-55 (251)
137 d1sxja2 c.37.1.20 (A:295-547) 89.1 0.097 7E-06 51.8 3.4 24 660-683 54-77 (253)
138 d1g16a_ c.37.1.8 (A:) Rab-rela 89.0 0.094 6.8E-06 48.7 3.1 21 661-681 5-25 (166)
139 d1e4va1 c.37.1.1 (A:1-121,A:15 88.8 0.095 6.9E-06 49.4 2.9 20 661-680 3-22 (179)
140 d2bmja1 c.37.1.8 (A:66-240) Ce 88.8 0.16 1.2E-05 48.0 4.7 21 660-680 7-27 (175)
141 d1htwa_ c.37.1.18 (A:) Hypothe 88.8 0.11 8.3E-06 49.2 3.4 28 655-682 30-57 (158)
142 d2cdna1 c.37.1.1 (A:1-181) Ade 88.7 0.099 7.2E-06 49.3 3.0 21 661-681 3-23 (181)
143 d2f7sa1 c.37.1.8 (A:5-190) Rab 88.7 0.1 7.6E-06 49.3 3.2 21 661-681 8-28 (186)
144 d1vhta_ c.37.1.1 (A:) Dephosph 88.6 0.11 7.7E-06 50.8 3.2 21 660-680 5-25 (208)
145 d1kk1a3 c.37.1.8 (A:6-200) Ini 88.6 0.12 8.5E-06 49.8 3.5 22 661-682 8-29 (195)
146 d1moza_ c.37.1.8 (A:) ADP-ribo 88.6 0.068 5E-06 50.5 1.7 21 661-681 20-40 (182)
147 d1z2aa1 c.37.1.8 (A:8-171) Rab 88.5 0.12 8.8E-06 47.9 3.4 20 661-680 5-24 (164)
148 d1u8za_ c.37.1.8 (A:) Ras-rela 88.5 0.2 1.5E-05 46.7 5.0 30 660-689 6-40 (168)
149 d2gjsa1 c.37.1.8 (A:91-258) Ra 88.2 0.12 8.6E-06 48.3 3.1 23 661-683 4-26 (168)
150 d1tq4a_ c.37.1.8 (A:) Interfer 88.2 0.1 7.4E-06 56.5 3.0 23 661-683 59-81 (400)
151 d1tf7a1 c.37.1.11 (A:14-255) C 88.0 0.14 1E-05 49.3 3.6 24 654-677 22-45 (242)
152 d1akya1 c.37.1.1 (A:3-130,A:16 88.0 0.12 8.7E-06 48.9 3.0 21 661-681 5-25 (180)
153 d2ak3a1 c.37.1.1 (A:0-124,A:16 87.9 0.12 8.6E-06 49.8 3.0 23 660-682 8-30 (189)
154 d2fnaa2 c.37.1.20 (A:1-283) Ar 87.7 0.13 9.3E-06 50.7 3.3 23 658-680 29-51 (283)
155 d1pzna2 c.37.1.11 (A:96-349) D 87.7 0.12 8.4E-06 50.8 2.9 25 654-678 32-56 (254)
156 d1e0sa_ c.37.1.8 (A:) ADP-ribo 87.7 0.084 6.1E-06 49.5 1.7 23 661-683 15-37 (173)
157 d1z0fa1 c.37.1.8 (A:8-173) Rab 87.5 0.15 1.1E-05 47.4 3.3 20 661-680 7-26 (166)
158 d2i1qa2 c.37.1.11 (A:65-322) D 87.4 0.15 1.1E-05 49.3 3.5 25 655-679 31-55 (258)
159 d1vg8a_ c.37.1.8 (A:) Rab7 {Ra 87.3 0.12 8.9E-06 48.8 2.7 20 661-680 5-24 (184)
160 d1sxjd2 c.37.1.20 (D:26-262) R 87.3 0.13 9.6E-06 50.2 3.0 21 661-681 36-56 (237)
161 d2a5ja1 c.37.1.8 (A:9-181) Rab 87.2 0.15 1.1E-05 47.6 3.3 21 661-681 6-26 (173)
162 d1yzqa1 c.37.1.8 (A:14-177) Ra 87.2 0.14 1E-05 47.2 3.0 20 661-680 3-22 (164)
163 d2g3ya1 c.37.1.8 (A:73-244) GT 87.2 0.18 1.3E-05 47.3 3.7 23 661-683 6-28 (172)
164 d2atva1 c.37.1.8 (A:5-172) Ras 87.1 0.24 1.7E-05 46.1 4.6 20 661-680 5-24 (168)
165 d1wmsa_ c.37.1.8 (A:) Rab9a {H 87.1 0.16 1.1E-05 47.5 3.3 20 661-680 9-28 (174)
166 d2ew1a1 c.37.1.8 (A:4-174) Rab 87.0 0.14 1E-05 47.7 3.0 20 661-680 8-27 (171)
167 d1x1ra1 c.37.1.8 (A:10-178) Ra 86.9 0.23 1.7E-05 46.3 4.4 20 661-680 7-26 (169)
168 d1z08a1 c.37.1.8 (A:17-183) Ra 86.9 0.14 9.9E-06 47.7 2.7 20 661-680 6-25 (167)
169 d1kaoa_ c.37.1.8 (A:) Rap2a {H 86.9 0.17 1.2E-05 46.9 3.4 21 661-681 6-26 (167)
170 d1z06a1 c.37.1.8 (A:32-196) Ra 86.8 0.17 1.2E-05 46.6 3.3 20 661-680 5-24 (165)
171 d2qm8a1 c.37.1.10 (A:5-327) Me 86.7 0.15 1.1E-05 53.5 3.3 24 658-681 51-74 (323)
172 d1z0ja1 c.37.1.8 (A:2-168) Rab 86.7 0.14 1E-05 47.5 2.7 20 661-680 7-26 (167)
173 d1v5wa_ c.37.1.11 (A:) Meiotic 86.6 0.18 1.3E-05 49.3 3.5 26 654-679 33-58 (258)
174 d1xpua3 c.37.1.11 (A:129-417) 86.2 0.15 1.1E-05 52.9 2.7 31 653-683 38-68 (289)
175 d1kmqa_ c.37.1.8 (A:) RhoA {Hu 86.2 0.14 1E-05 48.1 2.3 21 661-681 5-25 (177)
176 d1x3sa1 c.37.1.8 (A:2-178) Rab 86.1 0.19 1.4E-05 47.1 3.3 20 661-680 10-29 (177)
177 d2bcgy1 c.37.1.8 (Y:3-196) GTP 86.0 0.18 1.3E-05 48.2 3.1 20 661-680 9-28 (194)
178 d1gsia_ c.37.1.1 (A:) Thymidyl 86.0 0.19 1.4E-05 48.1 3.2 23 660-682 2-24 (208)
179 d1a7ja_ c.37.1.6 (A:) Phosphor 85.9 0.1 7.5E-06 54.1 1.3 24 660-683 6-29 (288)
180 d1in4a2 c.37.1.20 (A:17-254) H 85.6 0.18 1.3E-05 49.4 3.0 24 661-684 38-61 (238)
181 d1zcba2 c.37.1.8 (A:47-75,A:20 85.6 0.18 1.3E-05 47.6 2.9 27 661-687 5-33 (200)
182 d1knxa2 c.91.1.2 (A:133-309) H 85.6 0.36 2.6E-05 46.4 5.0 42 646-693 4-45 (177)
183 d2fn4a1 c.37.1.8 (A:24-196) r- 85.3 0.17 1.2E-05 47.4 2.4 20 661-680 9-28 (173)
184 d2bmea1 c.37.1.8 (A:6-179) Rab 85.2 0.17 1.2E-05 47.3 2.3 20 661-680 8-27 (174)
185 d1m7ba_ c.37.1.8 (A:) RhoE (RN 85.1 0.31 2.3E-05 45.9 4.3 30 661-690 5-39 (179)
186 d1ofha_ c.37.1.20 (A:) HslU {H 84.8 0.21 1.5E-05 51.9 3.1 25 658-682 49-73 (309)
187 d1i2ma_ c.37.1.8 (A:) Ran {Hum 84.8 0.14 1E-05 47.9 1.6 21 661-681 6-26 (170)
188 d1kkma_ c.91.1.2 (A:) HPr kina 84.7 0.43 3.1E-05 45.7 5.2 33 646-679 3-35 (176)
189 d1wxqa1 c.37.1.8 (A:1-319) GTP 84.7 0.2 1.4E-05 51.9 2.9 22 661-682 3-24 (319)
190 d1u94a1 c.37.1.11 (A:6-268) Re 84.7 0.26 1.9E-05 50.2 3.7 43 654-696 50-93 (263)
191 d1fnna2 c.37.1.20 (A:1-276) CD 84.6 0.22 1.6E-05 48.8 3.1 27 659-685 44-70 (276)
192 d1r2qa_ c.37.1.8 (A:) Rab5a {H 84.6 0.25 1.8E-05 45.9 3.3 20 661-680 9-28 (170)
193 d1sxjb2 c.37.1.20 (B:7-230) Re 84.5 0.22 1.6E-05 48.6 3.0 43 783-826 101-143 (224)
194 d1ixsb2 c.37.1.20 (B:4-242) Ho 84.4 0.2 1.5E-05 49.2 2.7 22 661-682 38-59 (239)
195 d2c78a3 c.37.1.8 (A:9-212) Elo 84.2 0.21 1.5E-05 48.7 2.6 20 661-680 6-25 (204)
196 d2g6ba1 c.37.1.8 (A:58-227) Ra 84.1 0.22 1.6E-05 46.3 2.6 20 661-680 9-28 (170)
197 d1mh1a_ c.37.1.8 (A:) Rac {Hum 83.8 0.22 1.6E-05 46.9 2.6 21 660-680 7-27 (183)
198 d2qn6a3 c.37.1.8 (A:2-206) Ini 83.8 0.29 2.1E-05 47.3 3.5 24 660-683 10-33 (205)
199 d2fu5c1 c.37.1.8 (C:3-175) Rab 83.3 0.18 1.3E-05 47.1 1.7 20 661-680 9-28 (173)
200 d2dy1a2 c.37.1.8 (A:8-274) Elo 83.3 0.27 2E-05 50.2 3.1 23 660-682 4-29 (267)
201 d1p9ra_ c.37.1.11 (A:) Extrace 83.2 0.23 1.7E-05 53.5 2.8 48 775-828 219-266 (401)
202 d1c1ya_ c.37.1.8 (A:) Rap1A {H 83.2 0.25 1.8E-05 45.7 2.6 20 661-680 6-25 (167)
203 d2atxa1 c.37.1.8 (A:9-193) Rho 83.1 0.26 1.9E-05 46.6 2.7 20 661-680 12-31 (185)
204 d1odfa_ c.37.1.6 (A:) Hypothet 82.9 0.29 2.1E-05 50.5 3.2 74 660-751 29-110 (286)
205 d1lv7a_ c.37.1.20 (A:) AAA dom 82.6 0.35 2.6E-05 48.9 3.7 24 659-682 46-69 (256)
206 d1jala1 c.37.1.8 (A:1-278) Ych 82.5 0.42 3.1E-05 48.5 4.3 22 660-681 4-25 (278)
207 d1sxjc2 c.37.1.20 (C:12-238) R 82.4 0.29 2.1E-05 47.5 2.9 42 783-825 99-140 (227)
208 d1ni3a1 c.37.1.8 (A:11-306) Yc 82.3 0.29 2.1E-05 50.3 3.0 22 660-681 12-33 (296)
209 d1mo6a1 c.37.1.11 (A:1-269) Re 82.1 0.29 2.1E-05 50.1 2.8 42 654-695 56-98 (269)
210 d1w5sa2 c.37.1.20 (A:7-293) CD 82.0 0.23 1.7E-05 49.0 2.0 23 660-682 48-70 (287)
211 d2bv3a2 c.37.1.8 (A:7-282) Elo 81.3 0.32 2.3E-05 50.0 2.8 29 660-689 8-39 (276)
212 d2ngra_ c.37.1.8 (A:) CDC42 {H 80.6 0.32 2.3E-05 46.1 2.3 20 661-680 6-25 (191)
213 d1deka_ c.37.1.1 (A:) Deoxynuc 80.2 0.43 3.1E-05 46.8 3.2 22 659-680 2-23 (241)
214 d1jwyb_ c.37.1.8 (B:) Dynamin 79.8 0.46 3.4E-05 48.5 3.5 26 660-685 26-52 (306)
215 d1d2na_ c.37.1.20 (A:) Hexamer 79.4 0.39 2.8E-05 48.2 2.6 21 661-681 43-63 (246)
216 d2bcjq2 c.37.1.8 (Q:38-66,Q:18 79.0 0.43 3.1E-05 44.6 2.7 27 661-687 5-34 (200)
217 d1d2ea3 c.37.1.8 (A:55-250) El 78.6 0.44 3.2E-05 46.2 2.7 22 661-682 6-27 (196)
218 d1jnya3 c.37.1.8 (A:4-227) Elo 78.4 0.45 3.2E-05 46.8 2.7 19 661-679 6-24 (224)
219 d1g8pa_ c.37.1.20 (A:) ATPase 78.2 0.26 1.9E-05 51.3 0.8 25 660-684 30-54 (333)
220 d1f5na2 c.37.1.8 (A:7-283) Int 78.1 0.47 3.4E-05 48.6 2.8 23 660-682 34-56 (277)
221 d2jdid3 c.37.1.11 (D:82-357) C 77.7 0.55 4E-05 48.1 3.2 34 646-680 57-90 (276)
222 d2akab1 c.37.1.8 (B:6-304) Dyn 77.4 0.58 4.3E-05 47.5 3.3 22 661-682 29-50 (299)
223 d1ixza_ c.37.1.20 (A:) AAA dom 76.7 0.53 3.9E-05 47.2 2.7 22 661-682 45-66 (247)
224 d1ko7a2 c.91.1.2 (A:130-298) H 76.6 0.9 6.6E-05 43.1 4.2 32 647-679 5-36 (169)
225 d2ocpa1 c.37.1.1 (A:37-277) De 75.8 0.64 4.6E-05 45.3 3.0 23 660-682 4-26 (241)
226 d1e32a2 c.37.1.20 (A:201-458) 75.5 0.63 4.6E-05 46.7 2.9 22 661-682 41-62 (258)
227 d1r6bx3 c.37.1.20 (X:437-751) 75.2 0.74 5.4E-05 47.7 3.4 24 659-682 53-76 (315)
228 d1nija1 c.37.1.10 (A:2-223) Hy 74.2 0.64 4.6E-05 45.7 2.5 21 660-680 5-25 (222)
229 d1zunb3 c.37.1.8 (B:16-237) Su 73.2 0.93 6.8E-05 44.6 3.4 19 661-679 12-30 (222)
230 d1svma_ c.37.1.20 (A:) Papillo 72.5 0.79 5.7E-05 48.6 2.9 30 654-683 150-179 (362)
231 d1g41a_ c.37.1.20 (A:) HslU {H 70.7 0.76 5.5E-05 50.1 2.2 24 660-683 51-74 (443)
232 d1fx0a3 c.37.1.11 (A:97-372) C 70.0 0.8 5.8E-05 46.9 2.1 37 646-683 56-92 (276)
233 d1e9ra_ c.37.1.11 (A:) Bacteri 69.4 0.97 7.1E-05 48.0 2.7 44 784-830 277-321 (433)
234 d2olra1 c.91.1.1 (A:228-540) P 68.4 1.1 7.8E-05 46.6 2.7 20 656-675 12-31 (313)
235 d1r5ba3 c.37.1.8 (A:215-459) E 67.1 1 7.6E-05 44.9 2.2 18 661-678 27-44 (245)
236 d1j3ba1 c.91.1.1 (A:212-529) P 67.1 1.1 8.1E-05 46.6 2.5 19 657-675 13-31 (318)
237 d1f60a3 c.37.1.8 (A:2-240) Elo 66.3 1.3 9.5E-05 44.0 2.8 19 661-679 9-27 (239)
238 d1n0ua2 c.37.1.8 (A:3-343) Elo 65.8 0.71 5.1E-05 48.7 0.6 23 661-683 20-45 (341)
239 d1lkxa_ c.37.1.9 (A:) Myosin S 64.5 1.7 0.00012 49.9 3.5 25 657-681 85-109 (684)
240 d1p6xa_ c.37.1.1 (A:) Thymidin 64.2 2.3 0.00016 44.5 4.3 30 661-690 9-38 (333)
241 d1ii2a1 c.91.1.1 (A:201-523) P 63.5 1.6 0.00011 45.5 2.8 19 657-675 13-31 (323)
242 d1yksa1 c.37.1.14 (A:185-324) 63.3 0.8 5.8E-05 39.9 0.4 21 655-675 4-24 (140)
243 d1qvra3 c.37.1.20 (A:536-850) 62.8 1.8 0.00013 44.7 3.1 23 660-682 55-77 (315)
244 d1br2a2 c.37.1.9 (A:80-789) My 62.6 1.8 0.00013 49.8 3.4 26 657-682 90-115 (710)
245 d1d0xa2 c.37.1.9 (A:2-33,A:80- 62.5 1.8 0.00013 49.8 3.4 27 656-682 123-149 (712)
246 d2jdia3 c.37.1.11 (A:95-379) C 60.7 1.4 9.9E-05 45.2 1.7 33 646-679 57-89 (285)
247 d1uaaa1 c.37.1.19 (A:2-307) DE 59.9 1.9 0.00014 42.9 2.6 16 660-675 16-31 (306)
248 d1pjra1 c.37.1.19 (A:1-318) DE 59.4 1.7 0.00013 43.8 2.2 16 660-675 26-41 (318)
249 d1l8qa2 c.37.1.20 (A:77-289) C 59.0 2.3 0.00016 41.3 2.9 68 781-864 95-164 (213)
250 d2mysa2 c.37.1.9 (A:4-33,A:80- 57.6 2.3 0.00017 49.5 3.2 27 656-682 121-147 (794)
251 d1u0ja_ c.37.1.20 (A:) Rep 40 56.9 2.4 0.00017 42.8 2.7 31 656-687 102-132 (267)
252 d1osna_ c.37.1.1 (A:) Thymidin 56.5 2.4 0.00017 44.2 2.7 32 661-692 8-39 (331)
253 d1w44a_ c.37.1.11 (A:) NTPase 55.7 2.1 0.00015 44.5 2.1 29 653-682 119-147 (321)
254 d1um8a_ c.37.1.20 (A:) ClpX {H 55.0 2.8 0.00021 44.1 3.0 22 661-682 71-92 (364)
255 d1e2ka_ c.37.1.1 (A:) Thymidin 54.9 2.7 0.0002 43.7 2.9 23 661-683 7-29 (329)
256 d1jbka_ c.37.1.20 (A:) ClpB, A 54.4 3.2 0.00023 40.0 3.0 21 661-681 46-66 (195)
257 d1a1va1 c.37.1.14 (A:190-325) 54.2 2.2 0.00016 37.6 1.7 33 779-812 90-122 (136)
258 d1r6bx2 c.37.1.20 (X:169-436) 53.6 3.2 0.00023 41.9 3.0 21 661-681 42-62 (268)
259 d1kk8a2 c.37.1.9 (A:1-28,A:77- 53.5 2.7 0.0002 48.8 2.8 27 656-682 119-145 (789)
260 d2bmfa2 c.37.1.14 (A:178-482) 52.1 2.2 0.00016 42.4 1.6 25 655-679 6-32 (305)
261 d1w36d1 c.37.1.19 (D:2-360) Ex 51.9 5 0.00036 42.0 4.4 20 657-676 162-181 (359)
262 d1w7ja2 c.37.1.9 (A:63-792) My 51.2 3.6 0.00026 47.3 3.4 26 657-682 93-118 (730)
263 d1puja_ c.37.1.8 (A:) Probable 48.4 5.4 0.0004 39.8 3.9 26 660-685 114-139 (273)
264 d1gkub1 c.37.1.16 (B:1-250) He 45.9 2.4 0.00017 41.2 0.5 23 657-679 57-79 (237)
265 d2b8ta1 c.37.1.24 (A:11-149) T 44.4 6.4 0.00047 35.5 3.3 23 658-680 2-25 (139)
266 d1tuea_ c.37.1.20 (A:) Replica 41.4 4.2 0.00031 39.4 1.5 27 656-682 51-77 (205)
267 d1g5ta_ c.37.1.11 (A:) ATP:cor 38.8 6.2 0.00045 36.6 2.2 58 782-839 93-153 (157)
268 d1gg4a4 c.72.2.1 (A:99-312) UD 37.4 7.8 0.00056 36.0 2.8 27 657-685 1-27 (214)
269 d1xbta1 c.37.1.24 (A:18-150) T 37.0 8.9 0.00065 34.2 3.0 20 657-676 1-20 (133)
270 d1qvra2 c.37.1.20 (A:149-535) 34.2 8.1 0.00059 40.8 2.5 18 662-679 47-64 (387)
271 d1ny5a2 c.37.1.20 (A:138-384) 33.2 11 0.00081 36.9 3.2 27 783-810 94-120 (247)
272 d2p6ra3 c.37.1.19 (A:1-202) He 32.1 5.7 0.00041 37.3 0.7 19 657-675 39-57 (202)
273 d1g8fa3 c.37.1.15 (A:390-511) 31.5 13 0.00096 32.9 3.1 35 656-690 4-40 (122)
274 d1wp9a1 c.37.1.19 (A:1-200) pu 28.5 12 0.00091 34.3 2.6 18 662-679 27-44 (200)
275 d2vgna3 d.79.3.2 (A:278-381) D 25.1 35 0.0026 28.9 4.7 46 785-830 39-85 (104)
276 g1qhh.1 c.37.1.19 (A:,B:,C:,D: 24.0 14 0.001 40.1 2.2 24 775-799 205-228 (623)
277 d1xx6a1 c.37.1.24 (A:2-142) Th 23.5 20 0.0014 32.2 2.8 20 657-676 6-25 (141)
278 d1j6ua3 c.72.2.1 (A:89-295) UD 23.2 21 0.0015 33.1 3.1 27 656-684 12-38 (207)
279 d1byia_ c.37.1.10 (A:) Dethiob 22.0 22 0.0016 32.6 2.9 24 660-683 3-27 (224)
No 1
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=100.00 E-value=2.2e-59 Score=495.01 Aligned_cols=222 Identities=27% Similarity=0.435 Sum_probs=202.1
Q ss_pred cEEEEeEEEEcCCCCCCCccceeeeeEEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEcCeecCccHHHhhc
Q 002236 626 AIISDNLRKIYPGRDGNPEKVAVNGLSLALPSGECFGMLGPNGAGKTTFISMMIGITRTTSGTAYVQGLDIRTDMDRIYT 705 (949)
Q Consensus 626 ~I~v~nL~K~Y~~~~~~~~~~al~~lSl~v~~Gei~gLLG~NGAGKTTLlk~L~Gl~~ptsG~I~i~G~di~~~~~~~r~ 705 (949)
.|+++||+|+|++ +.||+||||+|++||++||+||||||||||+|+|+|+++|++|+|+++|+++..... .++
T Consensus 6 ~I~v~nlsk~yg~------~~al~~vsl~v~~Ge~~~liGpsGaGKSTLl~~i~Gl~~p~sG~I~i~g~~i~~~~~-~~r 78 (239)
T d1v43a3 6 EVKLENLTKRFGN------FTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIYFGDRDVTYLPP-KDR 78 (239)
T ss_dssp CEEEEEEEEEETT------EEEEEEEEEEECTTCEEEEECCTTSSHHHHHHHHHTSSCCSEEEEEETTEECTTSCG-GGG
T ss_pred eEEEEEEEEEECC------EEEEcceeEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCEEEEcceecccCCc-ccc
Confidence 5999999999973 789999999999999999999999999999999999999999999999999976433 457
Q ss_pred cEEEEcCCCCCCCCCCHHHHHHHHhhhcCCCchhHHHHHHHHHHHcCCCCCCcccccCCCCChhHHHHHHHHHHHcCCCc
Q 002236 706 SMGVCPQEDLLWETLTGREHLLFYGRLKNLKGPALTQAVEESLKSVNLFHGGVADKQAGKYSGGMKRRLSVAISLIGNPK 785 (949)
Q Consensus 706 ~iG~~pQ~~~L~~~lTv~E~L~~~~~l~g~~~~~~~~~v~~~L~~l~L~~~~~~~~~~~~LSGGqKqRLslA~ALi~~P~ 785 (949)
+||||||++.||+.+||+||+.+..++++.++++.+++++++++.++|. +++|+++.+||||||||++|||||+.+|+
T Consensus 79 ~ig~v~Q~~~l~~~ltv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~~LSGGq~QRvaiAraL~~~P~ 156 (239)
T d1v43a3 79 NISMVFQSYAVWPHMTVYENIAFPLKIKKFPKDEIDKRVRWAAELLQIE--ELLNRYPAQLSGGQRQRVAVARAIVVEPD 156 (239)
T ss_dssp TEEEEEC------CCCHHHHHHTTCC--CCCHHHHHHHHHHHHHHTTCG--GGTTSCTTTCCSSCHHHHHHHHHHTTCCS
T ss_pred eEEEEeechhhcccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCh--hhhcCChhhCCHHHHHHHHHHhhhccCCC
Confidence 8999999999999999999999999999999999999999999999997 58999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHh-cC-CcEEEEEcCCHHHHHHhcCEEEEEeCCEEEEEcCHHHHHHhcC
Q 002236 786 VVYMDEPSTGLDPASRNNLWNVVKRA-KQ-GRAIILTTHSMEEAEALCDRLGIFVDGSLQCIGNPKELKARYG 856 (949)
Q Consensus 786 vllLDEPTsGLDp~sr~~l~~~L~~~-~~-g~tIIltTH~meeae~l~drI~Im~~G~l~~~Gs~~~Lk~~~g 856 (949)
||||||||+||||.+++.+|++|+++ ++ |.|||++||||+++.++||||++|++|++++.|+++++.++..
T Consensus 157 iLllDEPts~LD~~~~~~i~~ll~~l~~~~g~tii~vTHd~~~a~~~~dri~vm~~G~iv~~G~~~el~~~P~ 229 (239)
T d1v43a3 157 VLLMDEPLSNLDAKLRVAMRAEIKKLQQKLKVTTIYVTHDQVEAMTMGDRIAVMNRGQLLQIGSPTEVYLRPN 229 (239)
T ss_dssp EEEEESTTTTSCHHHHHHHHHHHHHHHHHHTCEEEEEESCHHHHHHHCSEEEEEETTEEEEEECHHHHHHCCS
T ss_pred ceeecCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCC
Confidence 99999999999999999999999996 44 9999999999999999999999999999999999999987643
No 2
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=100.00 E-value=7.8e-59 Score=491.39 Aligned_cols=224 Identities=25% Similarity=0.432 Sum_probs=210.0
Q ss_pred cEEEEeEEEEcCCCCCCCccceeeeeEEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEcCeecCccHH----
Q 002236 626 AIISDNLRKIYPGRDGNPEKVAVNGLSLALPSGECFGMLGPNGAGKTTFISMMIGITRTTSGTAYVQGLDIRTDMD---- 701 (949)
Q Consensus 626 ~I~v~nL~K~Y~~~~~~~~~~al~~lSl~v~~Gei~gLLG~NGAGKTTLlk~L~Gl~~ptsG~I~i~G~di~~~~~---- 701 (949)
.|+++||+|.|++ +.||+||||+|++||++||+||||||||||+|+|+|+++|++|+|+++|+++.....
T Consensus 3 ~i~v~nl~k~yg~------~~al~~vsl~i~~Ge~~~liG~sGaGKSTll~~i~gl~~p~sG~I~~~g~~i~~~~~~~~~ 76 (240)
T d1g2912 3 GVRLVDVWKVFGE------VTAVREMSLEVKDGEFMILLGPSGCGKTTTLRMIAGLEEPSRGQIYIGDKLVADPEKGIFV 76 (240)
T ss_dssp EEEEEEEEEEETT------EEEEEEEEEEEETTCEEEEECSTTSSHHHHHHHHHTSSCCSEEEEEETTEEEEEGGGTEEC
T ss_pred cEEEEeEEEEECC------EEEEcceeeEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCCEEEECCEEecccchhhhc
Confidence 5899999999973 689999999999999999999999999999999999999999999999999864322
Q ss_pred -HhhccEEEEcCCCCCCCCCCHHHHHHHHhhhcCCCchhHHHHHHHHHHHcCCCCCCcccccCCCCChhHHHHHHHHHHH
Q 002236 702 -RIYTSMGVCPQEDLLWETLTGREHLLFYGRLKNLKGPALTQAVEESLKSVNLFHGGVADKQAGKYSGGMKRRLSVAISL 780 (949)
Q Consensus 702 -~~r~~iG~~pQ~~~L~~~lTv~E~L~~~~~l~g~~~~~~~~~v~~~L~~l~L~~~~~~~~~~~~LSGGqKqRLslA~AL 780 (949)
..|++||||||++.||+.+||+||+.+..++++.+.++.+++++++++.++|. +++++++++||||||||++|||||
T Consensus 77 ~~~~r~ig~v~Q~~~L~~~ltV~eni~~~~~~~~~~~~e~~~~v~~~l~~~~l~--~~~~~~p~~LSGGqkQRv~IAraL 154 (240)
T d1g2912 77 PPKDRDIAMVFQSYALYPHMTVYDNIAFPLKLRKVPRQEIDQRVREVAELLGLT--ELLNRKPRELSGGQRQRVALGRAI 154 (240)
T ss_dssp CGGGSSEEEECSCCCCCTTSCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTCG--GGTTCCGGGSCHHHHHHHHHHHHH
T ss_pred ccccccceecccchhhcchhhhhHhhhhhHHHcCCCHHHHHHHHHHHHHHcCCh--hHhcCChhhCCHHHHHHHHHHHHH
Confidence 23678999999999999999999999999999999999999999999999997 589999999999999999999999
Q ss_pred cCCCcEEEEeCCCCCCCHHHHHHHHHHHHHh-cC-CcEEEEEcCCHHHHHHhcCEEEEEeCCEEEEEcCHHHHHHhcCC
Q 002236 781 IGNPKVVYMDEPSTGLDPASRNNLWNVVKRA-KQ-GRAIILTTHSMEEAEALCDRLGIFVDGSLQCIGNPKELKARYGG 857 (949)
Q Consensus 781 i~~P~vllLDEPTsGLDp~sr~~l~~~L~~~-~~-g~tIIltTH~meeae~l~drI~Im~~G~l~~~Gs~~~Lk~~~g~ 857 (949)
+.+|++|||||||+||||.+++.+|+.|+++ ++ |.|||++||||+++.++||||++|++|++++.|+++++.++...
T Consensus 155 ~~~P~iLllDEPt~~LD~~~~~~i~~~l~~l~~~~g~tvi~vTHd~~~~~~~~drv~vm~~G~iv~~G~~~el~~~P~~ 233 (240)
T d1g2912 155 VRKPQVFLMDEPLSNLDAKLRVRMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGVLQQVGSPDEVYDKPAN 233 (240)
T ss_dssp HTCCSEEEEECTTTTSCHHHHHHHHHHHHHHHHHHTCEEEEEESCHHHHHHHCSEEEEEETTEEEEEECHHHHHHSCSB
T ss_pred hcCCCEEEecCCCcccCHHHHHHHHHHHHHHHhccCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCC
Confidence 9999999999999999999999999999986 44 99999999999999999999999999999999999999876443
No 3
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=3.8e-59 Score=491.45 Aligned_cols=220 Identities=27% Similarity=0.439 Sum_probs=167.7
Q ss_pred EEEEeEEEEcCCCCCCCccceeeeeEEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEcCeecCccHHHhhcc
Q 002236 627 IISDNLRKIYPGRDGNPEKVAVNGLSLALPSGECFGMLGPNGAGKTTFISMMIGITRTTSGTAYVQGLDIRTDMDRIYTS 706 (949)
Q Consensus 627 I~v~nL~K~Y~~~~~~~~~~al~~lSl~v~~Gei~gLLG~NGAGKTTLlk~L~Gl~~ptsG~I~i~G~di~~~~~~~r~~ 706 (949)
|+++||+|+|++ +.||+||||+|++||++||+||||||||||+|+|+|+++|++|+|+++|+++.... ..+++
T Consensus 1 Iev~nv~k~yg~------~~~l~~isl~i~~Gei~~liGpsGsGKSTLl~~i~Gl~~p~sG~I~i~g~~i~~~~-~~~r~ 73 (232)
T d2awna2 1 VQLQNVTKAWGE------VVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFIGEKRMNDTP-PAERG 73 (232)
T ss_dssp EEEEEEEEEETT------EEEEEEEEEEECTTCEEEEECCTTSSHHHHHHHHHTSSCCSEEEEEESSSCCTTSC-GGGTC
T ss_pred CEEEEEEEEECC------EEEEeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCCEEEECCEECCCCc-hhhce
Confidence 689999999973 78999999999999999999999999999999999999999999999999996533 34678
Q ss_pred EEEEcCCCCCCCCCCHHHHHHHHhhhcCCCchhHHHHHHHHHHHcCCCCCCcccccCCCCChhHHHHHHHHHHHcCCCcE
Q 002236 707 MGVCPQEDLLWETLTGREHLLFYGRLKNLKGPALTQAVEESLKSVNLFHGGVADKQAGKYSGGMKRRLSVAISLIGNPKV 786 (949)
Q Consensus 707 iG~~pQ~~~L~~~lTv~E~L~~~~~l~g~~~~~~~~~v~~~L~~l~L~~~~~~~~~~~~LSGGqKqRLslA~ALi~~P~v 786 (949)
||||||++.|++.+||+||+.+..++++.++++.+++++++++.++|. ++.|+++.+|||||||||+|||||+++|++
T Consensus 74 ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~~~l~~~~l~--~~~~~~~~~LSGGqkQRvaiAraL~~~P~i 151 (232)
T d2awna2 74 VGMVFQSYALYPHLSVAENMSFGLKLAGAKKEVINQRVNQVAEVLQLA--HLLDRKPKALSGGQRQRVAIGRTLVAEPSV 151 (232)
T ss_dssp EEEECSSCCC---------------------CHHHHHHHHHHHHC-----------------------CHHHHHHTCCSE
T ss_pred eeeeccccccccchhHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCh--hhhhCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 999999999999999999999999999999899999999999999997 489999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHh-c-CCcEEEEEcCCHHHHHHhcCEEEEEeCCEEEEEcCHHHHHHhc
Q 002236 787 VYMDEPSTGLDPASRNNLWNVVKRA-K-QGRAIILTTHSMEEAEALCDRLGIFVDGSLQCIGNPKELKARY 855 (949)
Q Consensus 787 llLDEPTsGLDp~sr~~l~~~L~~~-~-~g~tIIltTH~meeae~l~drI~Im~~G~l~~~Gs~~~Lk~~~ 855 (949)
|||||||+||||.+++++|+.|+++ + .|+|||++||||++|..+||||++|++|++++.|+++++.++.
T Consensus 152 lllDEPts~LD~~~~~~i~~~l~~l~~~~g~tii~vTHd~~~a~~~~dri~vm~~G~iv~~G~~~el~~~P 222 (232)
T d2awna2 152 FLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYP 222 (232)
T ss_dssp EEEESTTTTSCHHHHHHHHHHHHHHHHHSCCEEEEEESCHHHHHHHCSEEEEEETTEEEEEECHHHHHHSC
T ss_pred EEEcCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEeCHHHHHhCC
Confidence 9999999999999999999999985 3 5999999999999999999999999999999999999998753
No 4
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=4.7e-58 Score=485.43 Aligned_cols=229 Identities=28% Similarity=0.439 Sum_probs=211.6
Q ss_pred cEEEEeEEEEcCCCCCCCccceeeeeEEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEcCeecCc----cHH
Q 002236 626 AIISDNLRKIYPGRDGNPEKVAVNGLSLALPSGECFGMLGPNGAGKTTFISMMIGITRTTSGTAYVQGLDIRT----DMD 701 (949)
Q Consensus 626 ~I~v~nL~K~Y~~~~~~~~~~al~~lSl~v~~Gei~gLLG~NGAGKTTLlk~L~Gl~~ptsG~I~i~G~di~~----~~~ 701 (949)
+|+++||+|+|+++. ....||+||||+|++||++||+||||||||||+++|+|+++|++|+|.++|+++.. +..
T Consensus 1 mi~v~nlsk~y~~~~--~~~~al~~vsl~i~~Ge~~~iiG~sGsGKSTLl~~i~Gl~~p~sG~I~~~g~~i~~~~~~~~~ 78 (240)
T d3dhwc1 1 MIKLSNITKVFHQGT--RTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELT 78 (240)
T ss_dssp CEEEEEEEEEEECSS--CEEEEEEEEEEEECSSCEEEEEESTTSSHHHHHHHHTTSSCCSEEEEEETTEEECTTCHHHHH
T ss_pred CEEEEeEEEEeCCCC--eeEEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHcCCccccCCceEEcCeEeeeCChhhhh
Confidence 589999999997532 23579999999999999999999999999999999999999999999999999964 234
Q ss_pred HhhccEEEEcCCCCCCCCCCHHHHHHHHhhhcCCCchhHHHHHHHHHHHcCCCCCCcccccCCCCChhHHHHHHHHHHHc
Q 002236 702 RIYTSMGVCPQEDLLWETLTGREHLLFYGRLKNLKGPALTQAVEESLKSVNLFHGGVADKQAGKYSGGMKRRLSVAISLI 781 (949)
Q Consensus 702 ~~r~~iG~~pQ~~~L~~~lTv~E~L~~~~~l~g~~~~~~~~~v~~~L~~l~L~~~~~~~~~~~~LSGGqKqRLslA~ALi 781 (949)
++|++|||+||++.+++.+||+||+.+..++++.++++.+++++++|+.+||. +++++++.+|||||||||+|||||+
T Consensus 79 ~~rr~ig~VfQ~~~l~~~~tv~eni~~~l~~~~~~~~~~~~~v~~~L~~vgL~--~~~~~~~~~LSGG~~QRvaiAraL~ 156 (240)
T d3dhwc1 79 KARRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEVKRRVTELLSLVGLG--DKHDSYPSNLSGGQKQRVAIARALA 156 (240)
T ss_dssp HHHHHEEECCSSCCCCTTSBHHHHHHHHHHTTTCCTTHHHHHHHHHHHHHSTT--TTTSSCBSCCCHHHHHHHHHHHHHH
T ss_pred hhhccccccccccccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCc--hhhhCChhhCCHHHHHHHHHhhhhc
Confidence 56788999999999999999999999999999999999999999999999997 4899999999999999999999999
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHHHHHh-cC-CcEEEEEcCCHHHHHHhcCEEEEEeCCEEEEEcCHHHHHHhcCCc
Q 002236 782 GNPKVVYMDEPSTGLDPASRNNLWNVVKRA-KQ-GRAIILTTHSMEEAEALCDRLGIFVDGSLQCIGNPKELKARYGGS 858 (949)
Q Consensus 782 ~~P~vllLDEPTsGLDp~sr~~l~~~L~~~-~~-g~tIIltTH~meeae~l~drI~Im~~G~l~~~Gs~~~Lk~~~g~~ 858 (949)
.+|++|||||||+||||.+++.++++|+++ ++ |.|||++||||+++..+||||++|++|++++.|+++++.++....
T Consensus 157 ~~P~lLllDEPt~~LD~~~~~~i~~~l~~l~~~~g~tvi~vTHdl~~~~~~~dri~vl~~G~iv~~G~~~ei~~~P~~~ 235 (240)
T d3dhwc1 157 SNPKVLLCDEATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSHPKTP 235 (240)
T ss_dssp TCCSEEEEESGGGSSCHHHHHHHHHHHHHHHHHHCCEEEEEBSCHHHHHHHCSEEEEEETTEEEEEEETTTTTCSSCCT
T ss_pred cCCCeEEeccccccCCHHHhhHHHHHHHHHHhccCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCh
Confidence 999999999999999999999999999986 44 999999999999999999999999999999999999997654433
No 5
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=100.00 E-value=2.3e-57 Score=481.00 Aligned_cols=224 Identities=30% Similarity=0.543 Sum_probs=214.9
Q ss_pred cEEEEeEEEEcCCCCCCCccceeeeeEEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEcCeecCccHHHhhc
Q 002236 626 AIISDNLRKIYPGRDGNPEKVAVNGLSLALPSGECFGMLGPNGAGKTTFISMMIGITRTTSGTAYVQGLDIRTDMDRIYT 705 (949)
Q Consensus 626 ~I~v~nL~K~Y~~~~~~~~~~al~~lSl~v~~Gei~gLLG~NGAGKTTLlk~L~Gl~~ptsG~I~i~G~di~~~~~~~r~ 705 (949)
+|+++||+|+|++ ++||+|+||+|++||++||+||||||||||+|+|+|+++|++|+|.++|+++.....+.|+
T Consensus 2 aI~v~nl~k~yg~------~~vl~~vs~~v~~Gei~glvG~nGaGKSTLl~~l~G~~~p~~G~i~i~G~~i~~~~~~~~~ 75 (238)
T d1vpla_ 2 AVVVKDLRKRIGK------KEILKGISFEIEEGEIFGLIGPNGAGKTTTLRIISTLIKPSSGIVTVFGKNVVEEPHEVRK 75 (238)
T ss_dssp CEEEEEEEEEETT------EEEEEEEEEEECTTCEEEEECCTTSSHHHHHHHHTTSSCCSEEEEEETTEETTTCHHHHHT
T ss_pred CEEEEeEEEEECC------EEEEccceeEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCCEEEECcEecccChHHHHh
Confidence 5899999999974 6899999999999999999999999999999999999999999999999999888888899
Q ss_pred cEEEEcCCCCCCCCCCHHHHHHHHhhhcCCCchhHHHHHHHHHHHcCCCCCCcccccCCCCChhHHHHHHHHHHHcCCCc
Q 002236 706 SMGVCPQEDLLWETLTGREHLLFYGRLKNLKGPALTQAVEESLKSVNLFHGGVADKQAGKYSGGMKRRLSVAISLIGNPK 785 (949)
Q Consensus 706 ~iG~~pQ~~~L~~~lTv~E~L~~~~~l~g~~~~~~~~~v~~~L~~l~L~~~~~~~~~~~~LSGGqKqRLslA~ALi~~P~ 785 (949)
.+|||||.+.+++.+|++||+.+++.+++.+.++..+.++++++.++|. +..++++++||||||||++|||||+++|+
T Consensus 76 ~i~~vpq~~~~~~~ltv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~~lSgG~~qrv~iA~al~~~p~ 153 (238)
T d1vpla_ 76 LISYLPEEAGAYRNMQGIEYLRFVAGFYASSSSEIEEMVERATEIAGLG--EKIKDRVSTYSKGMVRKLLIARALMVNPR 153 (238)
T ss_dssp TEEEECTTCCCCTTSBHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCG--GGGGSBGGGCCHHHHHHHHHHHHHTTCCS
T ss_pred hEeEeeeccccCCCccHHHHHHHHHHhcCCCHHHHHHHHHHHHHhCCCH--HHHhhhhhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999988888999999999999997 58899999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHh-cCCcEEEEEcCCHHHHHHhcCEEEEEeCCEEEEEcCHHHHHHhcCC
Q 002236 786 VVYMDEPSTGLDPASRNNLWNVVKRA-KQGRAIILTTHSMEEAEALCDRLGIFVDGSLQCIGNPKELKARYGG 857 (949)
Q Consensus 786 vllLDEPTsGLDp~sr~~l~~~L~~~-~~g~tIIltTH~meeae~l~drI~Im~~G~l~~~Gs~~~Lk~~~g~ 857 (949)
++||||||+||||.+++.+|++|++. ++|+|||++||+|+|++.+||||++|++|+++..|+++++++++..
T Consensus 154 illLDEPt~gLD~~~~~~i~~~i~~~~~~g~tii~~tH~l~~~~~~~drv~vl~~G~iv~~g~~~el~~~~~~ 226 (238)
T d1vpla_ 154 LAILDEPTSGLDVLNAREVRKILKQASQEGLTILVSSHNMLEVEFLCDRIALIHNGTIVETGTVEELKERYKA 226 (238)
T ss_dssp EEEEESTTTTCCHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHTTTCSEEEEEETTEEEEEEEHHHHHHHTTC
T ss_pred EEEecCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhccCC
Confidence 99999999999999999999999986 5799999999999999999999999999999999999999998764
No 6
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=100.00 E-value=1.5e-57 Score=478.09 Aligned_cols=217 Identities=28% Similarity=0.496 Sum_probs=202.2
Q ss_pred cEEEEeEEEEcCCCCCCCccceeeeeEEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEcCeecCccHHHhhc
Q 002236 626 AIISDNLRKIYPGRDGNPEKVAVNGLSLALPSGECFGMLGPNGAGKTTFISMMIGITRTTSGTAYVQGLDIRTDMDRIYT 705 (949)
Q Consensus 626 ~I~v~nL~K~Y~~~~~~~~~~al~~lSl~v~~Gei~gLLG~NGAGKTTLlk~L~Gl~~ptsG~I~i~G~di~~~~~~~r~ 705 (949)
+|+++||+|+|++ .||+||||+|++||++||+||||||||||+|+|+|+++|++|+|+++|+++.... ..|+
T Consensus 1 mi~v~nlsk~y~~-------~aL~~vs~~i~~Ge~~~liGpsGaGKSTll~~l~Gl~~p~sG~I~~~G~~i~~~~-~~~r 72 (229)
T d3d31a2 1 MIEIESLSRKWKN-------FSLDNLSLKVESGEYFVILGPTGAGKTLFLELIAGFHVPDSGRILLDGKDVTDLS-PEKH 72 (229)
T ss_dssp CEEEEEEEEECSS-------CEEEEEEEEECTTCEEEEECCCTHHHHHHHHHHHTSSCCSEEEEEETTEECTTSC-HHHH
T ss_pred CEEEEEEEEEeCC-------EEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHhcCcCCCCCEEEEccEeccccc-hhHh
Confidence 5899999999962 4999999999999999999999999999999999999999999999999997533 3467
Q ss_pred cEEEEcCCCCCCCCCCHHHHHHHHhhhcCCCchhHHHHHHHHHHHcCCCCCCcccccCCCCChhHHHHHHHHHHHcCCCc
Q 002236 706 SMGVCPQEDLLWETLTGREHLLFYGRLKNLKGPALTQAVEESLKSVNLFHGGVADKQAGKYSGGMKRRLSVAISLIGNPK 785 (949)
Q Consensus 706 ~iG~~pQ~~~L~~~lTv~E~L~~~~~l~g~~~~~~~~~v~~~L~~l~L~~~~~~~~~~~~LSGGqKqRLslA~ALi~~P~ 785 (949)
+|||+||++.||+.+||+||+.+..++++.+. +++++++++.+++. +++|+++.+|||||||||+|||||+.+|+
T Consensus 73 ~ig~v~Q~~~l~~~~tV~enl~~~~~~~~~~~---~~~~~~~l~~~~l~--~~~~~~~~~LSGG~~QRvaiAraL~~~P~ 147 (229)
T d3d31a2 73 DIAFVYQNYSLFPHMNVKKNLEFGMRMKKIKD---PKRVLDTARDLKIE--HLLDRNPLTLSGGEQQRVALARALVTNPK 147 (229)
T ss_dssp TCEEECTTCCCCTTSCHHHHHHHHHHHHCCCC---HHHHHHHHHHTTCT--TTTTSCGGGSCHHHHHHHHHHHHTTSCCS
T ss_pred cceeeccccccCccccHHHHHHHHHhhccccH---HHHHHHHHHHhcch--hhHhCChhhCCHHHhcchhhhhhhhccCC
Confidence 89999999999999999999999999988764 35799999999997 48999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHh-c-CCcEEEEEcCCHHHHHHhcCEEEEEeCCEEEEEcCHHHHHHhc
Q 002236 786 VVYMDEPSTGLDPASRNNLWNVVKRA-K-QGRAIILTTHSMEEAEALCDRLGIFVDGSLQCIGNPKELKARY 855 (949)
Q Consensus 786 vllLDEPTsGLDp~sr~~l~~~L~~~-~-~g~tIIltTH~meeae~l~drI~Im~~G~l~~~Gs~~~Lk~~~ 855 (949)
+|||||||+||||.++++++++|+++ + .|.|||++||||++++.+||||++|++|++++.|+++++.++.
T Consensus 148 iLllDEPts~LD~~~~~~i~~~l~~l~~~~g~tii~vtHd~~~~~~~~drv~vm~~G~iv~~g~~~el~~~P 219 (229)
T d3d31a2 148 ILLLDEPLSALDPRTQENAREMLSVLHKKNKLTVLHITHDQTEARIMADRIAVVMDGKLIQVGKPEEIFEKP 219 (229)
T ss_dssp EEEEESSSTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCHHHHHHHCSEEEEESSSCEEEEECHHHHHSSC
T ss_pred ceeecCCCcCCCHHHHHHHHHHHHHHHhcCCcEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCC
Confidence 99999999999999999999999986 4 4899999999999999999999999999999999999998653
No 7
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=100.00 E-value=4.6e-58 Score=485.32 Aligned_cols=224 Identities=27% Similarity=0.500 Sum_probs=209.7
Q ss_pred cEEEEeEEEEcCCCCCCCccceeeeeEEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEcCeecCcc----HH
Q 002236 626 AIISDNLRKIYPGRDGNPEKVAVNGLSLALPSGECFGMLGPNGAGKTTFISMMIGITRTTSGTAYVQGLDIRTD----MD 701 (949)
Q Consensus 626 ~I~v~nL~K~Y~~~~~~~~~~al~~lSl~v~~Gei~gLLG~NGAGKTTLlk~L~Gl~~ptsG~I~i~G~di~~~----~~ 701 (949)
.|+++||+|+|++ +++.||+||||+|++||++||+||||||||||+++|+|+++|++|+|+++|+++... ..
T Consensus 3 ~i~v~nlsk~y~~----g~~~aL~~vsl~i~~Ge~~~iiG~sGsGKSTll~~i~gl~~p~~G~I~~~g~~i~~~~~~~~~ 78 (242)
T d1oxxk2 3 RIIVKNVSKVFKK----GKVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVASNGKLIVP 78 (242)
T ss_dssp CEEEEEEEEEEGG----GTEEEEEEEEEEECTTCEEEEECSCHHHHHHHHHHHHTSSCCSEEEEEETTEEEEETTEESSC
T ss_pred EEEEEeEEEEECC----CCEEEEeceEEEECCCCEEEEECCCCCcHHHHHHHHHcCcCCCCceEEECCEEeecCchhhcc
Confidence 5899999999963 147899999999999999999999999999999999999999999999999998642 23
Q ss_pred HhhccEEEEcCCCCCCCCCCHHHHHHHHhhhcCCCchhHHHHHHHHHHHcCCCCCCcccccCCCCChhHHHHHHHHHHHc
Q 002236 702 RIYTSMGVCPQEDLLWETLTGREHLLFYGRLKNLKGPALTQAVEESLKSVNLFHGGVADKQAGKYSGGMKRRLSVAISLI 781 (949)
Q Consensus 702 ~~r~~iG~~pQ~~~L~~~lTv~E~L~~~~~l~g~~~~~~~~~v~~~L~~l~L~~~~~~~~~~~~LSGGqKqRLslA~ALi 781 (949)
..|++|||+||++.||+.+||+||+.+..+.++.++++.+++++++++.+||. +++|+++++|||||||||+|||||+
T Consensus 79 ~~rr~ig~vfQ~~~L~p~ltv~eni~~~l~~~~~~~~~~~~~v~~~l~~~gL~--~~~~~~p~~LSGGqkQRvaiARaL~ 156 (242)
T d1oxxk2 79 PEDRKIGMVFQTWALYPNLTAFENIAFPLTNMKMSKEEIRKRVEEVAKILDIH--HVLNHFPRELSGAQQQRVALARALV 156 (242)
T ss_dssp GGGSCEEEEETTSCCCTTSCHHHHHHGGGTTSSCCHHHHHHHHHHHHHHTTCG--GGTTSCGGGSCHHHHHHHHHHHHHT
T ss_pred hhhccceEEeccccccccccHHHHhhhhhHhhcCCHHHHHHHHHHHHhhcChH--hhhhCChhhCCHHHHhHHHHHhHHh
Confidence 45678999999999999999999999999999999999999999999999996 5899999999999999999999999
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHHHHHh-cC-CcEEEEEcCCHHHHHHhcCEEEEEeCCEEEEEcCHHHHHHhc
Q 002236 782 GNPKVVYMDEPSTGLDPASRNNLWNVVKRA-KQ-GRAIILTTHSMEEAEALCDRLGIFVDGSLQCIGNPKELKARY 855 (949)
Q Consensus 782 ~~P~vllLDEPTsGLDp~sr~~l~~~L~~~-~~-g~tIIltTH~meeae~l~drI~Im~~G~l~~~Gs~~~Lk~~~ 855 (949)
.+|++|||||||+||||.+++.++++|+++ ++ |.|||++||||+++.++||||++|++|++++.|+++++.++.
T Consensus 157 ~~P~llllDEPt~~LD~~~~~~i~~~i~~l~~~~g~tvi~vTHd~~~~~~~~dri~vm~~G~iv~~g~~~el~~~P 232 (242)
T d1oxxk2 157 KDPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPEDLYDNP 232 (242)
T ss_dssp TCCSEEEEESTTTTSCGGGHHHHHHHHHHHHHHHCCEEEEEESCHHHHHHHCSEEEEEETTEEEEEECHHHHHHSC
T ss_pred hcccceeecCCccCCCHHHHHHHHHHHHHHHhccCCEEEEEECCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCC
Confidence 999999999999999999999999999986 44 999999999999999999999999999999999999998754
No 8
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=100.00 E-value=1.7e-55 Score=467.22 Aligned_cols=221 Identities=24% Similarity=0.406 Sum_probs=199.8
Q ss_pred CCcEEEEeEEEEcCCCCCCCccceeeeeEEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEcCeecCccHH--
Q 002236 624 SHAIISDNLRKIYPGRDGNPEKVAVNGLSLALPSGECFGMLGPNGAGKTTFISMMIGITRTTSGTAYVQGLDIRTDMD-- 701 (949)
Q Consensus 624 ~~~I~v~nL~K~Y~~~~~~~~~~al~~lSl~v~~Gei~gLLG~NGAGKTTLlk~L~Gl~~ptsG~I~i~G~di~~~~~-- 701 (949)
+.+|+++||+|.|++ +.||+||||+|++||++||+||||||||||+|+|+|+++|++|+|+++|+++.....
T Consensus 4 d~~Lev~~l~k~yg~------~~al~~vs~~i~~Gei~~liGpnGaGKSTl~~~i~Gl~~p~~G~I~~~G~~i~~~~~~~ 77 (240)
T d1ji0a_ 4 DIVLEVQSLHVYYGA------IHAIKGIDLKVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQKGKIIFNGQDITNKPAHV 77 (240)
T ss_dssp SEEEEEEEEEEEETT------EEEEEEEEEEEETTCEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEECTTCCHHH
T ss_pred ceEEEEeeEEEEECC------EEEEeeeeEEECCCCEEEEECCCCCcHHHHHHHHhCCCCCCccEEEecccccccccHHH
Confidence 357999999999973 689999999999999999999999999999999999999999999999999976433
Q ss_pred HhhccEEEEcCCCCCCCCCCHHHHHHHHhhhcCCCchhHHHHHHHHHHHc-CCCCCCcccccCCCCChhHHHHHHHHHHH
Q 002236 702 RIYTSMGVCPQEDLLWETLTGREHLLFYGRLKNLKGPALTQAVEESLKSV-NLFHGGVADKQAGKYSGGMKRRLSVAISL 780 (949)
Q Consensus 702 ~~r~~iG~~pQ~~~L~~~lTv~E~L~~~~~l~g~~~~~~~~~v~~~L~~l-~L~~~~~~~~~~~~LSGGqKqRLslA~AL 780 (949)
..|..|+|+||+..+|+.+||+||+.+....+. ..+..++.++++++.+ ++. +..++++++|||||||||+|||||
T Consensus 78 ~~r~gi~~~~q~~~l~~~ltv~en~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~LSGG~~Qrv~iAraL 154 (240)
T d1ji0a_ 78 INRMGIALVPEGRRIFPELTVYENLMMGAYNRK-DKEGIKRDLEWIFSLFPRLK--ERLKQLGGTLSGGEQQMLAIGRAL 154 (240)
T ss_dssp HHHTTEEEECSSCCCCTTSBHHHHHHGGGTTCC-CSSHHHHHHHHHHHHCHHHH--TTTTSBSSSSCHHHHHHHHHHHHH
T ss_pred HHHhcccccCcccccCCcccHHHHHHHHHHhcC-CHHHHHHHHHHHHHHhhChH--HHHhCchhhCCHHHHHHHHHHHHH
Confidence 234569999999999999999999987665443 4455667778888877 575 478999999999999999999999
Q ss_pred cCCCcEEEEeCCCCCCCHHHHHHHHHHHHHh-cCCcEEEEEcCCHHHHHHhcCEEEEEeCCEEEEEcCHHHHHH
Q 002236 781 IGNPKVVYMDEPSTGLDPASRNNLWNVVKRA-KQGRAIILTTHSMEEAEALCDRLGIFVDGSLQCIGNPKELKA 853 (949)
Q Consensus 781 i~~P~vllLDEPTsGLDp~sr~~l~~~L~~~-~~g~tIIltTH~meeae~l~drI~Im~~G~l~~~Gs~~~Lk~ 853 (949)
+++|++|||||||+||||.+++++|++|+++ ++|+|||++||+|++++++||||++|++|++++.|+++++.+
T Consensus 155 ~~~P~lLllDEPt~gLD~~~~~~i~~~i~~l~~~g~til~~tH~l~~~~~~~drv~vl~~G~iv~~g~~~el~~ 228 (240)
T d1ji0a_ 155 MSRPKLLMMDEPSLGLAPILVSEVFEVIQKINQEGTTILLVEQNALGALKVAHYGYVLETGQIVLEGKASELLD 228 (240)
T ss_dssp TTCCSEEEEECTTTTCCHHHHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHCSEEEEEETTEEEEEEEHHHHHT
T ss_pred HhCCCEeeecCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHhc
Confidence 9999999999999999999999999999986 569999999999999999999999999999999999999864
No 9
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}
Probab=100.00 E-value=2.5e-55 Score=470.24 Aligned_cols=224 Identities=23% Similarity=0.401 Sum_probs=206.0
Q ss_pred cEEEEeEEEEcCCCCCCCccceeeeeEEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEcCeecCc-------
Q 002236 626 AIISDNLRKIYPGRDGNPEKVAVNGLSLALPSGECFGMLGPNGAGKTTFISMMIGITRTTSGTAYVQGLDIRT------- 698 (949)
Q Consensus 626 ~I~v~nL~K~Y~~~~~~~~~~al~~lSl~v~~Gei~gLLG~NGAGKTTLlk~L~Gl~~ptsG~I~i~G~di~~------- 698 (949)
.|+++||+|+|++ +.||+||||+|++||++||+||||||||||+++|+|+++|++|+|+++|+++..
T Consensus 2 ~Lev~nl~k~yg~------~~al~~vs~~i~~GEi~~iiG~sGsGKSTLl~~i~Gl~~p~~G~I~~~G~~i~~~~~~~~~ 75 (258)
T d1b0ua_ 2 KLHVIDLHKRYGG------HEVLKGVSLQARAGDVISIIGSSGSGKSTFLRCINFLEKPSEGAIIVNGQNINLVRDKDGQ 75 (258)
T ss_dssp CEEEEEEEEEETT------EEEEEEEEEEECTTCEEEEECCTTSSHHHHHHHHTTSSCCSEEEEEETTEECCEEECTTSS
T ss_pred eEEEEEEEEEECC------EEEEcceeeEEcCCCEEEEECCCCCcHHHHHHHHHcCccCCCCCEEECCEEeccCCccchh
Confidence 4899999999973 679999999999999999999999999999999999999999999999999852
Q ss_pred -------cHHHhhccEEEEcCCCCCCCCCCHHHHHHHHh-hhcCCCchhHHHHHHHHHHHcCCCCCCcccccCCCCChhH
Q 002236 699 -------DMDRIYTSMGVCPQEDLLWETLTGREHLLFYG-RLKNLKGPALTQAVEESLKSVNLFHGGVADKQAGKYSGGM 770 (949)
Q Consensus 699 -------~~~~~r~~iG~~pQ~~~L~~~lTv~E~L~~~~-~l~g~~~~~~~~~v~~~L~~l~L~~~~~~~~~~~~LSGGq 770 (949)
.....|++|||+||++.+++.+||+||+.+.. +..+.+.++.++++.++++.++|.+ ...++++.+|||||
T Consensus 76 ~~~~~~~~~~~~r~~ig~vfQ~~~l~~~~tv~env~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~p~~LSGG~ 154 (258)
T d1b0ua_ 76 LKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKHDARERALKYLAKVGIDE-RAQGKYPVHLSGGQ 154 (258)
T ss_dssp EEESCHHHHHHHHHHEEEECSSCCCCTTSCHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTCCH-HHHTSCGGGSCHHH
T ss_pred cccccHhHHHHHhcceEEEEechhhccchhcchhhhhhHHHhcCCCHHHHHHHHHHHHHHcCCch-hhhccCcccccHHH
Confidence 12356788999999999999999999999863 5667788888999999999999973 35688899999999
Q ss_pred HHHHHHHHHHcCCCcEEEEeCCCCCCCHHHHHHHHHHHHHh-cCCcEEEEEcCCHHHHHHhcCEEEEEeCCEEEEEcCHH
Q 002236 771 KRRLSVAISLIGNPKVVYMDEPSTGLDPASRNNLWNVVKRA-KQGRAIILTTHSMEEAEALCDRLGIFVDGSLQCIGNPK 849 (949)
Q Consensus 771 KqRLslA~ALi~~P~vllLDEPTsGLDp~sr~~l~~~L~~~-~~g~tIIltTH~meeae~l~drI~Im~~G~l~~~Gs~~ 849 (949)
||||+|||||+.+|++|||||||+||||.++++++++|+++ ++|+|||++||||+++..+||||++|++|++++.|+++
T Consensus 155 ~QRv~iAraL~~~P~llilDEPT~gLD~~~~~~i~~ll~~l~~~g~til~vtHdl~~~~~~adri~vm~~G~iv~~g~~~ 234 (258)
T d1b0ua_ 155 QQRVSIARALAMEPDVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIEEEGDPE 234 (258)
T ss_dssp HHHHHHHHHHHTCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHTTCCEEEECSCHHHHHHHCSEEEEEETTEEEEEECHH
T ss_pred HHHHHHHHHHhcCCCEEEeccccccCCHHHHHHHHHhhhhhcccCCceEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHH
Confidence 99999999999999999999999999999999999999986 56999999999999999999999999999999999999
Q ss_pred HHHHhcC
Q 002236 850 ELKARYG 856 (949)
Q Consensus 850 ~Lk~~~g 856 (949)
++.++..
T Consensus 235 ev~~~P~ 241 (258)
T d1b0ua_ 235 QVFGNPQ 241 (258)
T ss_dssp HHHHSCC
T ss_pred HHHhCCC
Confidence 9987643
No 10
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=100.00 E-value=3.3e-55 Score=461.06 Aligned_cols=219 Identities=23% Similarity=0.407 Sum_probs=196.0
Q ss_pred cEEEEeEEEEcCCCCCCCccceeeeeEEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEcCeecCcc-H---H
Q 002236 626 AIISDNLRKIYPGRDGNPEKVAVNGLSLALPSGECFGMLGPNGAGKTTFISMMIGITRTTSGTAYVQGLDIRTD-M---D 701 (949)
Q Consensus 626 ~I~v~nL~K~Y~~~~~~~~~~al~~lSl~v~~Gei~gLLG~NGAGKTTLlk~L~Gl~~ptsG~I~i~G~di~~~-~---~ 701 (949)
+|+++||+|+|+.. +....||+||||+|++||++||+||||||||||+++|+|+++|++|+|+++|+++... . .
T Consensus 1 mI~i~nlsk~y~~~--~~~~~al~~isl~i~~Ge~~~iiG~sGsGKSTLl~~i~gl~~p~sG~I~~~g~~i~~~~~~~~~ 78 (230)
T d1l2ta_ 1 MIKLKNVTKTYKMG--EEIIYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYIDNIKTNDLDDDELT 78 (230)
T ss_dssp CEEEEEEEEEEEET--TEEEEEEEEEEEEECTTCEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEECTTCCHHHHH
T ss_pred CEEEEeEEEEeCCC--CeeEEEEeceEEEEcCCCEEEEECCCCCCcchhhHhccCCCCCCcceeEECCEEcCcCChhhcc
Confidence 58999999999742 2235699999999999999999999999999999999999999999999999999752 2 2
Q ss_pred Hh-hccEEEEcCCCCCCCCCCHHHHHHHHhhhc---CCCchhHHHHHHHHHHHcCCCCCCcccccCCCCChhHHHHHHHH
Q 002236 702 RI-YTSMGVCPQEDLLWETLTGREHLLFYGRLK---NLKGPALTQAVEESLKSVNLFHGGVADKQAGKYSGGMKRRLSVA 777 (949)
Q Consensus 702 ~~-r~~iG~~pQ~~~L~~~lTv~E~L~~~~~l~---g~~~~~~~~~v~~~L~~l~L~~~~~~~~~~~~LSGGqKqRLslA 777 (949)
+. |++|||+||++.|++.+||+||+.+...++ +.+.++..+++.++|+.++|.+ ..+++++.+||||||||++||
T Consensus 79 ~~r~~~ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~-~~~~~~p~~LSGGqkQRvaIA 157 (230)
T d1l2ta_ 79 KIRRDKIGFVFQQFNLIPLLTALENVELPLIFKYRGAMSGEERRKRALECLKMAELEE-RFANHKPNQLSGGQQQRVAIA 157 (230)
T ss_dssp HHHHHHEEEECTTCCCCTTSCHHHHHHHHHHTCCSSCCCHHHHHHHHHHHHHHTTCCG-GGTTCCGGGSCHHHHHHHHHH
T ss_pred hhhcceEEEEecchhhCcCccHHHHHhHHHHHhccCCCCHHHHHHHHHHHHHhhchhh-hhhcCChhhCCHHHHHHHHHH
Confidence 23 357999999999999999999999987765 3455677788999999999974 468999999999999999999
Q ss_pred HHHcCCCcEEEEeCCCCCCCHHHHHHHHHHHHHh-cC-CcEEEEEcCCHHHHHHhcCEEEEEeCCEEEEEcCH
Q 002236 778 ISLIGNPKVVYMDEPSTGLDPASRNNLWNVVKRA-KQ-GRAIILTTHSMEEAEALCDRLGIFVDGSLQCIGNP 848 (949)
Q Consensus 778 ~ALi~~P~vllLDEPTsGLDp~sr~~l~~~L~~~-~~-g~tIIltTH~meeae~l~drI~Im~~G~l~~~Gs~ 848 (949)
|||+.+|++|||||||+||||.+++.+|++|+++ ++ |+|||++||||+++ ++||||++|++|+|+++|++
T Consensus 158 raL~~~P~lLllDEPTs~LD~~~~~~i~~~l~~l~~~~g~tii~vTHd~~~a-~~~drv~~m~~G~Iv~~g~~ 229 (230)
T d1l2ta_ 158 RALANNPPIILADQPTGALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDINVA-RFGERIIYLKDGEVEREEKL 229 (230)
T ss_dssp HHHTTCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHTTCCEEEEECSCHHHH-TTSSEEEEEETTEEEEEEEC
T ss_pred hhhhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHhhCCEEEEECCCHHHH-HhCCEEEEEECCEEEEeccC
Confidence 9999999999999999999999999999999996 44 99999999999998 69999999999999999864
No 11
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=100.00 E-value=3.5e-54 Score=460.92 Aligned_cols=222 Identities=23% Similarity=0.387 Sum_probs=200.1
Q ss_pred CcEEEEeEEEEcCCCCCCCccceeeeeEEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEcCeecCcc-H-HH
Q 002236 625 HAIISDNLRKIYPGRDGNPEKVAVNGLSLALPSGECFGMLGPNGAGKTTFISMMIGITRTTSGTAYVQGLDIRTD-M-DR 702 (949)
Q Consensus 625 ~~I~v~nL~K~Y~~~~~~~~~~al~~lSl~v~~Gei~gLLG~NGAGKTTLlk~L~Gl~~ptsG~I~i~G~di~~~-~-~~ 702 (949)
.+|+++||+|+|++ ++||+||||+|++||++||+||||||||||+|+|+|+++|++|+|+++|+++... . +.
T Consensus 3 ~iL~v~nlsk~yg~------~~aL~~vs~~v~~Gei~~liG~nGaGKSTLl~~i~Gl~~p~~G~I~~~g~~i~~~~~~~~ 76 (254)
T d1g6ha_ 3 EILRTENIVKYFGE------FKALDGVSISVNKGDVTLIIGPNGSGKSTLINVITGFLKADEGRVYFENKDITNKEPAEL 76 (254)
T ss_dssp EEEEEEEEEEEETT------EEEEEEECCEEETTCEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEECTTCCHHHH
T ss_pred ceEEEEEEEEEECC------eEEEcceEEEECCCCEEEEECCCCCcHHHHHHHHHCCCcCCCcEEEECCEeccchhHHHH
Confidence 37999999999974 6899999999999999999999999999999999999999999999999999753 2 33
Q ss_pred hhccEEEEcCCCCCCCCCCHHHHHHHHhhhc-------------CCCchhHHHHHHHHHHHcCCCCCCcccccCCCCChh
Q 002236 703 IYTSMGVCPQEDLLWETLTGREHLLFYGRLK-------------NLKGPALTQAVEESLKSVNLFHGGVADKQAGKYSGG 769 (949)
Q Consensus 703 ~r~~iG~~pQ~~~L~~~lTv~E~L~~~~~l~-------------g~~~~~~~~~v~~~L~~l~L~~~~~~~~~~~~LSGG 769 (949)
.++.|||+||++.+++.+||+||+.+....+ ....++..+++.++++.+++. ...|+++++||||
T Consensus 77 ~~~gi~~v~Q~~~~~~~ltv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~~LSgG 154 (254)
T d1g6ha_ 77 YHYGIVRTFQTPQPLKEMTVLENLLIGEICPGESPLNSLFYKKWIPKEEEMVEKAFKILEFLKLS--HLYDRKAGELSGG 154 (254)
T ss_dssp HHHTEEECCCCCGGGGGSBHHHHHHGGGTSTTSCHHHHHHHCSSCCCCHHHHHHHHHHHHHTTCG--GGTTSBGGGSCHH
T ss_pred HHhcCCccCCccccCCCCeeeeeeeehhhhccccchhhhhhhcccccHHHHHHHHHHHHHhcCcc--hhccCchhhCCcH
Confidence 4567999999999999999999998754322 123455667899999999997 4789999999999
Q ss_pred HHHHHHHHHHHcCCCcEEEEeCCCCCCCHHHHHHHHHHHHHh-cCCcEEEEEcCCHHHHHHhcCEEEEEeCCEEEEEcCH
Q 002236 770 MKRRLSVAISLIGNPKVVYMDEPSTGLDPASRNNLWNVVKRA-KQGRAIILTTHSMEEAEALCDRLGIFVDGSLQCIGNP 848 (949)
Q Consensus 770 qKqRLslA~ALi~~P~vllLDEPTsGLDp~sr~~l~~~L~~~-~~g~tIIltTH~meeae~l~drI~Im~~G~l~~~Gs~ 848 (949)
|||||+|||||+.+|++|||||||+||||.++++++++|+++ ++|+|||++||+|+++.++||||++|++|++++.|++
T Consensus 155 ~~Qrv~iAraL~~~P~llilDEPt~gLD~~~~~~i~~~i~~l~~~g~til~vsHdl~~~~~~~Drv~vm~~G~iv~~g~~ 234 (254)
T d1g6ha_ 155 QMKLVEIGRALMTNPKMIVMDEPIAGVAPGLAHDIFNHVLELKAKGITFLIIEHRLDIVLNYIDHLYVMFNGQIIAEGRG 234 (254)
T ss_dssp HHHHHHHHHHHHTCCSEEEEESTTTTCCHHHHHHHHHHHHHHHHTTCEEEEECSCCSTTGGGCSEEEEEETTEEEEEEES
T ss_pred HHHHHHHHHHHHhCcCchhhcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhCCEEEEEeCCEEEEEecH
Confidence 999999999999999999999999999999999999999986 5699999999999999999999999999999999999
Q ss_pred HHHHHh
Q 002236 849 KELKAR 854 (949)
Q Consensus 849 ~~Lk~~ 854 (949)
+|+.+.
T Consensus 235 ~e~~~~ 240 (254)
T d1g6ha_ 235 EEEIKN 240 (254)
T ss_dssp HHHHHH
T ss_pred HHHhhc
Confidence 987543
No 12
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=100.00 E-value=2.6e-53 Score=448.08 Aligned_cols=214 Identities=23% Similarity=0.412 Sum_probs=195.3
Q ss_pred cEEEEeEEEEcCCCCCCCccceeeeeEEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEcCeecCccHHHhhc
Q 002236 626 AIISDNLRKIYPGRDGNPEKVAVNGLSLALPSGECFGMLGPNGAGKTTFISMMIGITRTTSGTAYVQGLDIRTDMDRIYT 705 (949)
Q Consensus 626 ~I~v~nL~K~Y~~~~~~~~~~al~~lSl~v~~Gei~gLLG~NGAGKTTLlk~L~Gl~~ptsG~I~i~G~di~~~~~~~r~ 705 (949)
.+++ ++.|+|+. ..+ ||||++. ||++||+||||||||||+|+|+|+++|++|+|+++|+++.... ..|+
T Consensus 2 ~l~v-~~~k~~g~------~~~--~vs~~~~-~e~~~liGpnGaGKSTll~~i~Gl~~p~~G~I~~~G~~i~~~~-~~~r 70 (240)
T d2onka1 2 FLKV-RAEKRLGN------FRL--NVDFEMG-RDYCVLLGPTGAGKSVFLELIAGIVKPDRGEVRLNGADITPLP-PERR 70 (240)
T ss_dssp CEEE-EEEEEETT------EEE--EEEEEEC-SSEEEEECCTTSSHHHHHHHHHTSSCCSEEEEEETTEECTTSC-TTTS
T ss_pred EEEE-EEEEEECC------EEE--EEEEEeC-CEEEEEECCCCChHHHHHHHHHcCCCCCceEEEECCEECCcCC-HHHc
Confidence 3677 67899973 333 8999995 6899999999999999999999999999999999999997533 3478
Q ss_pred cEEEEcCCCCCCCCCCHHHHHHHHhhhcCCCchhHHHHHHHHHHHcCCCCCCcccccCCCCChhHHHHHHHHHHHcCCCc
Q 002236 706 SMGVCPQEDLLWETLTGREHLLFYGRLKNLKGPALTQAVEESLKSVNLFHGGVADKQAGKYSGGMKRRLSVAISLIGNPK 785 (949)
Q Consensus 706 ~iG~~pQ~~~L~~~lTv~E~L~~~~~l~g~~~~~~~~~v~~~L~~l~L~~~~~~~~~~~~LSGGqKqRLslA~ALi~~P~ 785 (949)
+|||+||++.||+.+||+||+.|. +++.++.+.+++++++++.+||. +++++++.+|||||||||+|||||+.+|+
T Consensus 71 ~ig~v~Q~~~l~~~ltV~enl~~~--l~~~~~~~~~~~v~~~l~~~gl~--~~~~~~~~~LSGG~kQRvaiAral~~~P~ 146 (240)
T d2onka1 71 GIGFVPQDYALFPHLSVYRNIAYG--LRNVERVERDRRVREMAEKLGIA--HLLDRKPARLSGGERQRVALARALVIQPR 146 (240)
T ss_dssp CCBCCCSSCCCCTTSCHHHHHHTT--CTTSCHHHHHHHHHHHHHTTTCT--TTTTCCGGGSCHHHHHHHHHHHHHTTCCS
T ss_pred CceeeccchhhcccchhhHhhhhh--hcccCHHHHHHHHHHHHHhcCcH--hhhhCChhhCCHHHHHHHHHHHHHhccCC
Confidence 899999999999999999999985 45667778888999999999997 58999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHh-cC-CcEEEEEcCCHHHHHHhcCEEEEEeCCEEEEEcCHHHHHHh
Q 002236 786 VVYMDEPSTGLDPASRNNLWNVVKRA-KQ-GRAIILTTHSMEEAEALCDRLGIFVDGSLQCIGNPKELKAR 854 (949)
Q Consensus 786 vllLDEPTsGLDp~sr~~l~~~L~~~-~~-g~tIIltTH~meeae~l~drI~Im~~G~l~~~Gs~~~Lk~~ 854 (949)
+|||||||+||||.+++.+|+.|+++ ++ |.|||++||+|+|+.++||||++|++|++++.|+++++.+.
T Consensus 147 illlDEPts~LD~~~~~~i~~~i~~l~~~~g~tvi~vtHd~~~~~~~adri~vm~~G~ii~~G~~~el~~~ 217 (240)
T d2onka1 147 LLLLDEPLSAVDLKTKGVLMEELRFVQREFDVPILHVTHDLIEAAMLADEVAVMLNGRIVEKGKLKELFSA 217 (240)
T ss_dssp SBEEESTTSSCCHHHHHHHHHHHHHHHHHHTCCEEEEESCHHHHHHHCSEEEEEETTEEEEEECHHHHHHS
T ss_pred ceEecCccccCCHHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEEecHHHHhcC
Confidence 99999999999999999999999986 44 99999999999999999999999999999999999999754
No 13
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=100.00 E-value=7.6e-51 Score=431.91 Aligned_cols=217 Identities=20% Similarity=0.344 Sum_probs=186.1
Q ss_pred cEEEEeEEEEcCCCCCCCccceeeeeEEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEcCeecCc-cHHHhh
Q 002236 626 AIISDNLRKIYPGRDGNPEKVAVNGLSLALPSGECFGMLGPNGAGKTTFISMMIGITRTTSGTAYVQGLDIRT-DMDRIY 704 (949)
Q Consensus 626 ~I~v~nL~K~Y~~~~~~~~~~al~~lSl~v~~Gei~gLLG~NGAGKTTLlk~L~Gl~~ptsG~I~i~G~di~~-~~~~~r 704 (949)
+|+++||++.|++ ++.+|+||||+|++||++||+||||||||||+++|+|+++|++|+|.++|+++.. +...+|
T Consensus 1 mle~knvsf~Y~~-----~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~~r 75 (242)
T d1mv5a_ 1 MLSARHVDFAYDD-----SEQILRDISFEAQPNSIIAFAGPSGGGKSTIFSLLERFYQPTAGEITIDGQPIDNISLENWR 75 (242)
T ss_dssp CEEEEEEEECSSS-----SSCSEEEEEEEECTTEEEEEECCTTSSHHHHHHHHTTSSCCSBSCEEETTEESTTTSCSCCT
T ss_pred CEEEEEEEEECCC-----CCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHHhhCCCCCEEEECCEEeccccHHHHH
Confidence 5899999999974 3579999999999999999999999999999999999999999999999999975 556788
Q ss_pred ccEEEEcCCCCCCCCCCHHHHHHHHhhhcCCCchhHHHHHHHHHHHcCCCC---------CCcccccCCCCChhHHHHHH
Q 002236 705 TSMGVCPQEDLLWETLTGREHLLFYGRLKNLKGPALTQAVEESLKSVNLFH---------GGVADKQAGKYSGGMKRRLS 775 (949)
Q Consensus 705 ~~iG~~pQ~~~L~~~lTv~E~L~~~~~l~g~~~~~~~~~v~~~L~~l~L~~---------~~~~~~~~~~LSGGqKqRLs 775 (949)
++||||||++.+|+. |++||+.+..... .. .+.+.+.++..++.+ +....+...+|||||||||+
T Consensus 76 ~~i~~v~Q~~~lf~~-ti~eNi~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~LSGGqkQRv~ 149 (242)
T d1mv5a_ 76 SQIGFVSQDSAIMAG-TIRENLTYGLEGD-YT----DEDLWQVLDLAFARSFVENMPDQLNTEVGERGVKISGGQRQRLA 149 (242)
T ss_dssp TTCCEECCSSCCCCE-EHHHHTTSCTTSC-SC----HHHHHHHHHHHTCTTTTTSSTTGGGCEESTTSBCCCHHHHHHHH
T ss_pred hheEEEccccccCCc-chhhheecccccc-cc----hhhHHHHHHHHHhhhhhccCcccccccccCCCCCCCHHHHHHHH
Confidence 999999999999987 9999997642211 11 233444444444321 01122345679999999999
Q ss_pred HHHHHcCCCcEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEcCCHHHHHHhcCEEEEEeCCEEEEEcCHHHHHHh
Q 002236 776 VAISLIGNPKVVYMDEPSTGLDPASRNNLWNVVKRAKQGRAIILTTHSMEEAEALCDRLGIFVDGSLQCIGNPKELKAR 854 (949)
Q Consensus 776 lA~ALi~~P~vllLDEPTsGLDp~sr~~l~~~L~~~~~g~tIIltTH~meeae~l~drI~Im~~G~l~~~Gs~~~Lk~~ 854 (949)
|||||+.+|+|+|||||||+||+.+++.+++.|+++.+|+|||++||+++.+. .||||++|++|++++.|++++|.++
T Consensus 150 iARal~~~p~ililDEpts~LD~~~~~~i~~~l~~l~~~~Tvi~itH~l~~~~-~~D~i~vl~~G~iv~~G~~~eLl~~ 227 (242)
T d1mv5a_ 150 IARAFLRNPKILMLDEATASLDSESESMVQKALDSLMKGRTTLVIAHRLSTIV-DADKIYFIEKGQITGSGKHNELVAT 227 (242)
T ss_dssp HHHHHHHCCSEEEEECCSCSSCSSSCCHHHHHHHHHHTTSEEEEECCSHHHHH-HCSEEEEEETTEECCCSCHHHHHHH
T ss_pred HHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHH-hCCEEEEEECCEEEEECCHHHHHhC
Confidence 99999999999999999999999999999999999888999999999999986 4999999999999999999999875
No 14
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=7e-50 Score=426.61 Aligned_cols=224 Identities=21% Similarity=0.381 Sum_probs=189.9
Q ss_pred CcEEEEeEEEEcCCCCCCCccceeeeeEEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEcCeecCc-cHHHh
Q 002236 625 HAIISDNLRKIYPGRDGNPEKVAVNGLSLALPSGECFGMLGPNGAGKTTFISMMIGITRTTSGTAYVQGLDIRT-DMDRI 703 (949)
Q Consensus 625 ~~I~v~nL~K~Y~~~~~~~~~~al~~lSl~v~~Gei~gLLG~NGAGKTTLlk~L~Gl~~ptsG~I~i~G~di~~-~~~~~ 703 (949)
..|+++||++.|+++ +++.||+||||+|++||++||+||||||||||+++|+|+++|++|+|+++|+++.. +.+.+
T Consensus 10 g~I~~~nvsf~Y~~~---~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~li~gl~~p~~G~I~i~g~~i~~~~~~~~ 86 (251)
T d1jj7a_ 10 GLVQFQDVSFAYPNR---PDVLVLQGLTFTLRPGEVTALVGPNGSGKSTVAALLQNLYQPTGGQLLLDGKPLPQYEHRYL 86 (251)
T ss_dssp CCEEEEEEEECCTTS---TTCCSEEEEEEEECTTCEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEEGGGBCHHHH
T ss_pred ceEEEEEEEEECCCC---CCCEeEeceEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCcCEEEECCEecchhhhHHH
Confidence 369999999999753 24679999999999999999999999999999999999999999999999999975 66778
Q ss_pred hccEEEEcCCCCCCCCCCHHHHHHHHhhhcCCCchhHHH-----HHHHHHHHc--CCCCCCcccccCCCCChhHHHHHHH
Q 002236 704 YTSMGVCPQEDLLWETLTGREHLLFYGRLKNLKGPALTQ-----AVEESLKSV--NLFHGGVADKQAGKYSGGMKRRLSV 776 (949)
Q Consensus 704 r~~iG~~pQ~~~L~~~lTv~E~L~~~~~l~g~~~~~~~~-----~v~~~L~~l--~L~~~~~~~~~~~~LSGGqKqRLsl 776 (949)
|++|||+||++.+|+. |++||+.+....+. ...+..+ ...+.++.+ ++. ...++.+.+|||||||||+|
T Consensus 87 r~~i~~v~Q~~~lf~~-tv~eni~~g~~~~~-~~~~~~~~~~~~~~~~~i~~l~~g~~--~~i~~~~~~LSGGqkQRvai 162 (251)
T d1jj7a_ 87 HRQVAAVGQEPQVFGR-SLQENIAYGLTQKP-TMEEITAAAVKSGAHSFISGLPQGYD--TEVDEAGSQLSGGQRQAVAL 162 (251)
T ss_dssp HHHEEEECSSCCCCSS-BHHHHHHCSCSSCC-CHHHHHHHHHHHTCHHHHHTSTTGGG--CBCCSSCSSSCHHHHHHHHH
T ss_pred HHHhhhccccccccCc-chhhhhhhhhcccc-hHHHHHHHHHHHHHHHHHHhccccch--hhHhccCccCChhHceEEEE
Confidence 8999999999999975 99999987532211 1111111 122344444 232 35677788999999999999
Q ss_pred HHHHcCCCcEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEcCCHHHHHHhcCEEEEEeCCEEEEEcCHHHHHHh
Q 002236 777 AISLIGNPKVVYMDEPSTGLDPASRNNLWNVVKRAK--QGRAIILTTHSMEEAEALCDRLGIFVDGSLQCIGNPKELKAR 854 (949)
Q Consensus 777 A~ALi~~P~vllLDEPTsGLDp~sr~~l~~~L~~~~--~g~tIIltTH~meeae~l~drI~Im~~G~l~~~Gs~~~Lk~~ 854 (949)
||||+.+|+|+||||||++||+.+++.+++.|+++. .|+|||++||+++.++ .||||++|++|++++.|++++|.++
T Consensus 163 ARal~~~p~ililDEpTs~LD~~~~~~i~~~l~~l~~~~~~Tvi~itH~l~~~~-~aDrI~vl~~G~iv~~Gt~~eLl~~ 241 (251)
T d1jj7a_ 163 ARALIRKPCVLILDDATSALDANSQLQVEQLLYESPERYSRSVLLITQHLSLVE-QADHILFLEGGAIREGGTHQQLMEK 241 (251)
T ss_dssp HHHHTTCCSEEEEESTTTTCCHHHHHHHHHHHHTCGGGGGCEEEEECSCHHHHH-TCSEEEEEETTEEEEEECHHHHHHH
T ss_pred eeccccCCcEEEecCcCcccChhhHHHHHHHHHHHhhhcCCEEEEEeCCHHHHH-hCCEEEEEECCEEEEECCHHHHHhC
Confidence 999999999999999999999999999999999863 3899999999999886 5999999999999999999999877
Q ss_pred cC
Q 002236 855 YG 856 (949)
Q Consensus 855 ~g 856 (949)
.+
T Consensus 242 ~~ 243 (251)
T d1jj7a_ 242 KG 243 (251)
T ss_dssp TS
T ss_pred Cc
Confidence 43
No 15
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=7.4e-50 Score=423.78 Aligned_cols=218 Identities=23% Similarity=0.415 Sum_probs=187.5
Q ss_pred EEEEeEEEEcCCCCCCCccceeeeeEEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEcCeecCc-cHHHhhc
Q 002236 627 IISDNLRKIYPGRDGNPEKVAVNGLSLALPSGECFGMLGPNGAGKTTFISMMIGITRTTSGTAYVQGLDIRT-DMDRIYT 705 (949)
Q Consensus 627 I~v~nL~K~Y~~~~~~~~~~al~~lSl~v~~Gei~gLLG~NGAGKTTLlk~L~Gl~~ptsG~I~i~G~di~~-~~~~~r~ 705 (949)
|+++||+++|++. .+.+|+||||+|++||++||+||||||||||+++|+|+++|++|+|+++|+++.. +...+|+
T Consensus 2 I~~~nvsf~Y~~~----~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~lr~ 77 (241)
T d2pmka1 2 ITFRNIRFRYKPD----SPVILDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPNWLRR 77 (241)
T ss_dssp EEEEEEEEESSTT----SCEEEEEEEEEEETTCEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHH
T ss_pred eEEEEEEEEeCCC----CcceEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCCCCEEEECCEEecccchhhhhc
Confidence 7899999999742 4679999999999999999999999999999999999999999999999999975 6678899
Q ss_pred cEEEEcCCCCCCCCCCHHHHHHHHhhhcCCCchhHHHHHHHHHHHcCCC------C---CCcccccCCCCChhHHHHHHH
Q 002236 706 SMGVCPQEDLLWETLTGREHLLFYGRLKNLKGPALTQAVEESLKSVNLF------H---GGVADKQAGKYSGGMKRRLSV 776 (949)
Q Consensus 706 ~iG~~pQ~~~L~~~lTv~E~L~~~~~l~g~~~~~~~~~v~~~L~~l~L~------~---~~~~~~~~~~LSGGqKqRLsl 776 (949)
+||||||++.+|+. |++||+.+... .... +++.+.++..++. + +...+..+.+|||||||||+|
T Consensus 78 ~i~~v~Q~~~lf~~-Ti~eNi~~~~~--~~~~----~~~~~~~~~~~~~~~i~~~~~~~~t~i~~~g~~LSGGq~QRval 150 (241)
T d2pmka1 78 QVGVVLQDNVLLNR-SIIDNISLANP--GMSV----EKVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAI 150 (241)
T ss_dssp HEEEECSSCCCTTS-BHHHHHCTTST--TCCH----HHHHHHHHHHTCHHHHTTSTTGGGSBCSTTTTCCCHHHHHHHHH
T ss_pred eEEEEecccccCCc-cccccccccCc--cccH----HHHHHHHHHHhhHHHHHhhhcchhhhcCCCCCccCHHHHHHHhh
Confidence 99999999999875 99999987532 1222 2233333333321 1 123456678999999999999
Q ss_pred HHHHcCCCcEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEcCCHHHHHHhcCEEEEEeCCEEEEEcCHHHHHHhcC
Q 002236 777 AISLIGNPKVVYMDEPSTGLDPASRNNLWNVVKRAKQGRAIILTTHSMEEAEALCDRLGIFVDGSLQCIGNPKELKARYG 856 (949)
Q Consensus 777 A~ALi~~P~vllLDEPTsGLDp~sr~~l~~~L~~~~~g~tIIltTH~meeae~l~drI~Im~~G~l~~~Gs~~~Lk~~~g 856 (949)
||||+.+|+|+|||||||+||+.+++.+++.|+++.+|+|+|++||+++.+. .||||++|++|++++.|++++|.++..
T Consensus 151 ARal~~~p~ililDEpts~LD~~~~~~i~~~l~~l~~~~Tvi~itH~l~~~~-~~D~i~vl~~G~Iv~~G~~~ell~~~~ 229 (241)
T d2pmka1 151 ARALVNNPKILIFDEATSALDYESEHVIMRNMHKICKGRTVIIIAHRLSTVK-NADRIIVMEKGKIVEQGKHKELLSEPE 229 (241)
T ss_dssp HHHHTTCCSEEEECCCCSCCCHHHHHHHHHHHHHHHTTSEEEEECSSGGGGT-TSSEEEEEETTEEEEEECHHHHHHSTT
T ss_pred hhhhhcccchhhhhCCccccCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHH-hCCEEEEEECCEEEEECCHHHHHhCCC
Confidence 9999999999999999999999999999999999888999999999999885 699999999999999999999987643
No 16
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=100.00 E-value=6.5e-49 Score=419.55 Aligned_cols=220 Identities=22% Similarity=0.421 Sum_probs=190.4
Q ss_pred cEEEEeEEEEcCCCCCCCccceeeeeEEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEcCeecCc-cHHHhh
Q 002236 626 AIISDNLRKIYPGRDGNPEKVAVNGLSLALPSGECFGMLGPNGAGKTTFISMMIGITRTTSGTAYVQGLDIRT-DMDRIY 704 (949)
Q Consensus 626 ~I~v~nL~K~Y~~~~~~~~~~al~~lSl~v~~Gei~gLLG~NGAGKTTLlk~L~Gl~~ptsG~I~i~G~di~~-~~~~~r 704 (949)
.|+++||+++|+++ ++.+|+||||+|++||++||+||||||||||+++|+|+++|++|+|+++|+++.. +...+|
T Consensus 13 ~I~~~nvsf~Y~~~----~~~~L~~isl~i~~Ge~iaivG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~~r 88 (253)
T d3b60a1 13 DLEFRNVTFTYPGR----EVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHILMDGHDLREYTLASLR 88 (253)
T ss_dssp CEEEEEEEECSSSS----SCCSEEEEEEEECTTCEEEEEECTTSSHHHHHHHHTTTTCCSEEEEEETTEETTTBCHHHHH
T ss_pred EEEEEEEEEEeCCC----CCceeeceEEEEcCCCEEEEECCCCChHHHHHHHHhcccCCCccEEEECCcccchhhhhhhh
Confidence 49999999999753 3579999999999999999999999999999999999999999999999999976 667788
Q ss_pred ccEEEEcCCCCCCCCCCHHHHHHHHhhhcCCCchhHHHHHHHHHHHcCCCC---------CCcccccCCCCChhHHHHHH
Q 002236 705 TSMGVCPQEDLLWETLTGREHLLFYGRLKNLKGPALTQAVEESLKSVNLFH---------GGVADKQAGKYSGGMKRRLS 775 (949)
Q Consensus 705 ~~iG~~pQ~~~L~~~lTv~E~L~~~~~l~g~~~~~~~~~v~~~L~~l~L~~---------~~~~~~~~~~LSGGqKqRLs 775 (949)
++|||+||++.+++. |+++|+.+. +....+.+ +++++++..++.+ +...++.+.+|||||||||+
T Consensus 89 ~~i~~v~Q~~~l~~~-ti~~n~~~~-~~~~~~~~----~i~~a~~~~~l~~~i~~l~~gl~t~~~~~~~~LSGGqkQRva 162 (253)
T d3b60a1 89 NQVALVSQNVHLFND-TVANNIAYA-RTEEYSRE----QIEEAARMAYAMDFINKMDNGLDTIIGENGVLLSGGQRQRIA 162 (253)
T ss_dssp HTEEEECSSCCCCSS-BHHHHHHTT-TTSCCCHH----HHHHHHHTTTCHHHHHHSTTGGGSBCCTTSCSSCHHHHHHHH
T ss_pred heEEEEeeccccCCc-chhhhhhhc-CcccCCHH----HHHHHHHHHhHHHHHHhccccchhhhcCCCCCcCHHHHHHHH
Confidence 999999999999876 999999864 33333333 3333333333210 13456677899999999999
Q ss_pred HHHHHcCCCcEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEcCCHHHHHHhcCEEEEEeCCEEEEEcCHHHHHHhc
Q 002236 776 VAISLIGNPKVVYMDEPSTGLDPASRNNLWNVVKRAKQGRAIILTTHSMEEAEALCDRLGIFVDGSLQCIGNPKELKARY 855 (949)
Q Consensus 776 lA~ALi~~P~vllLDEPTsGLDp~sr~~l~~~L~~~~~g~tIIltTH~meeae~l~drI~Im~~G~l~~~Gs~~~Lk~~~ 855 (949)
|||||+.+|+|+|||||||+||+.+++.+++.|+++.+++|||++||+++.++ .||||++|++|+|++.|++++|.++.
T Consensus 163 iARal~~~p~ililDEpts~LD~~~~~~i~~~l~~l~~~~Tvi~itH~l~~~~-~~D~v~vl~~G~Iv~~G~~~eLl~~~ 241 (253)
T d3b60a1 163 IARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIE-QADEIVVVEDGIIVERGTHSELLAQH 241 (253)
T ss_dssp HHHHHHHCCSEEEEETTTSSCCHHHHHHHHHHHHHHHTTSEEEEECSCGGGTT-TCSEEEEEETTEEEEEECHHHHHHHT
T ss_pred HHHHHhcCCCEEEeccccccCCHHHHHHHHHHHHHhccCCEEEEEECCHHHHH-hCCEEEEEECCEEEEECCHHHHHhCC
Confidence 99999999999999999999999999999999999888999999999999885 69999999999999999999998874
Q ss_pred C
Q 002236 856 G 856 (949)
Q Consensus 856 g 856 (949)
+
T Consensus 242 ~ 242 (253)
T d3b60a1 242 G 242 (253)
T ss_dssp S
T ss_pred c
Confidence 4
No 17
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=100.00 E-value=7.4e-49 Score=419.13 Aligned_cols=219 Identities=25% Similarity=0.424 Sum_probs=191.1
Q ss_pred cEEEEeEEEEcCCCCCCCccceeeeeEEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEcCeecCc-cHHHhh
Q 002236 626 AIISDNLRKIYPGRDGNPEKVAVNGLSLALPSGECFGMLGPNGAGKTTFISMMIGITRTTSGTAYVQGLDIRT-DMDRIY 704 (949)
Q Consensus 626 ~I~v~nL~K~Y~~~~~~~~~~al~~lSl~v~~Gei~gLLG~NGAGKTTLlk~L~Gl~~ptsG~I~i~G~di~~-~~~~~r 704 (949)
.|+++||+++|+++ .+.+|+||||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++.. +...+|
T Consensus 16 ~I~~~nvsf~Y~~~----~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~lr 91 (255)
T d2hyda1 16 RIDIDHVSFQYNDN----EAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLR 91 (255)
T ss_dssp CEEEEEEEECSCSS----SCCSEEEEEEEECTTCEEEEECSTTSSHHHHHTTTTTSSCCSEEEEEETTEEGGGSCHHHHH
T ss_pred EEEEEEEEEEeCCC----CCcceeceEEEEcCCCEEEEECCCCCcHHHHHHHHHhcCCccccccccCCEEcccCCHHHhh
Confidence 59999999999753 3679999999999999999999999999999999999999999999999999975 667889
Q ss_pred ccEEEEcCCCCCCCCCCHHHHHHHHhhhcCCCchhHHHHHHHHHHHcCCCC---------CCcccccCCCCChhHHHHHH
Q 002236 705 TSMGVCPQEDLLWETLTGREHLLFYGRLKNLKGPALTQAVEESLKSVNLFH---------GGVADKQAGKYSGGMKRRLS 775 (949)
Q Consensus 705 ~~iG~~pQ~~~L~~~lTv~E~L~~~~~l~g~~~~~~~~~v~~~L~~l~L~~---------~~~~~~~~~~LSGGqKqRLs 775 (949)
++||||||++.+|+. |++|||.++.. ...++++.++++..++.+ +........+||||||||++
T Consensus 92 ~~i~~v~Q~~~lf~~-Ti~eNi~~g~~------~~~~~~~~~al~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq~QRi~ 164 (255)
T d2hyda1 92 NQIGLVQQDNILFSD-TVKENILLGRP------TATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLS 164 (255)
T ss_dssp HTEEEECSSCCCCSS-BHHHHHGGGCS------SCCHHHHHHHHHHTTCHHHHHTSTTGGGCBCCGGGTTSCHHHHHHHH
T ss_pred heeeeeeccccCCCC-CHHHHHhccCc------CCCHHHHHHHHHHhCCHHHHHhccccccchhcCCCCCcCHHHHHHHH
Confidence 999999999999875 99999987521 112345566666666531 01233456689999999999
Q ss_pred HHHHHcCCCcEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEcCCHHHHHHhcCEEEEEeCCEEEEEcCHHHHHHhc
Q 002236 776 VAISLIGNPKVVYMDEPSTGLDPASRNNLWNVVKRAKQGRAIILTTHSMEEAEALCDRLGIFVDGSLQCIGNPKELKARY 855 (949)
Q Consensus 776 lA~ALi~~P~vllLDEPTsGLDp~sr~~l~~~L~~~~~g~tIIltTH~meeae~l~drI~Im~~G~l~~~Gs~~~Lk~~~ 855 (949)
|||||+.+|+|+||||||++||+.+++.+++.|+++.+++|+|++||+++.+. .||||++|++|++++.|++++|.++.
T Consensus 165 iARal~~~p~ililDEpts~LD~~t~~~i~~~l~~l~~~~TvI~itH~~~~~~-~~D~ii~l~~G~iv~~G~~~eLl~~~ 243 (255)
T d2hyda1 165 IARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTIT-HADKIVVIENGHIVETGTHRELIAKQ 243 (255)
T ss_dssp HHHHHHHCCSEEEEESTTTTCCHHHHHHHHHHHHHHTTTSEEEEECSSGGGTT-TCSEEEEEETTEEEEEECHHHHHHTT
T ss_pred HHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHH-hCCEEEEEECCEEEEECCHHHHHhCC
Confidence 99999999999999999999999999999999999888999999999999885 69999999999999999999998764
Q ss_pred C
Q 002236 856 G 856 (949)
Q Consensus 856 g 856 (949)
+
T Consensus 244 ~ 244 (255)
T d2hyda1 244 G 244 (255)
T ss_dssp S
T ss_pred c
Confidence 3
No 18
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=9.6e-47 Score=397.88 Aligned_cols=209 Identities=20% Similarity=0.315 Sum_probs=186.9
Q ss_pred cEEEEeEEEEcCCCCCCCccceeeeeEEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEcCeecCc-cHHHhh
Q 002236 626 AIISDNLRKIYPGRDGNPEKVAVNGLSLALPSGECFGMLGPNGAGKTTFISMMIGITRTTSGTAYVQGLDIRT-DMDRIY 704 (949)
Q Consensus 626 ~I~v~nL~K~Y~~~~~~~~~~al~~lSl~v~~Gei~gLLG~NGAGKTTLlk~L~Gl~~ptsG~I~i~G~di~~-~~~~~r 704 (949)
.++++|++++| +|++|||+|++||++||+||||||||||+++|+|+. |++|+|.++|+++.. ...+++
T Consensus 3 il~~~dv~~~~----------~l~~isl~I~~Gei~~iiG~nGaGKSTLl~~l~Gl~-~~~G~I~~~g~~i~~~~~~~~~ 71 (231)
T d1l7vc_ 3 VMQLQDVAEST----------RLGPLSGEVRAGEILHLVGPNGAGKSTLLARMAGMT-SGKGSIQFAGQPLEAWSATKLA 71 (231)
T ss_dssp EEEEEEECCTT----------TSCSEEEEEETTCEEECBCCTTSSHHHHHHHHHTSC-CCSSEEEESSSBGGGSCHHHHH
T ss_pred EEEEECcccCc----------eecCEEEEEcCCCEEEEECCCCCcHHHHHHHHhCCC-CCceEEEECCEECCcCCHHHHH
Confidence 57899997544 799999999999999999999999999999999976 689999999999865 455667
Q ss_pred ccEEEEcCCCCCCCCCCHHHHHHHHhhhcCCCchhHHHHHHHHHHHcCCCCCCcccccCCCCChhHHHHHHHHHHHcC--
Q 002236 705 TSMGVCPQEDLLWETLTGREHLLFYGRLKNLKGPALTQAVEESLKSVNLFHGGVADKQAGKYSGGMKRRLSVAISLIG-- 782 (949)
Q Consensus 705 ~~iG~~pQ~~~L~~~lTv~E~L~~~~~l~g~~~~~~~~~v~~~L~~l~L~~~~~~~~~~~~LSGGqKqRLslA~ALi~-- 782 (949)
...+|++|........++++++.++.. .+...+.++++++.+++. ++.++++++||||||||++||+||++
T Consensus 72 ~~~~~~~~~~~~~~~~~v~~~~~~~~~-----~~~~~~~~~~~~~~~~l~--~~~~~~~~~LSgG~~Qrv~iA~al~~~~ 144 (231)
T d1l7vc_ 72 LHRAYLSQQQTPPFATPVWHYLTLHQH-----DKTRTELLNDVAGALALD--DKLGRSTNQLSGGEWQRVRLAAVVLQIT 144 (231)
T ss_dssp HHEEEECSCCCCCSSCBHHHHHHHHCS-----CTTCHHHHHHHHHHTTCT--TTTTSBGGGCCHHHHHHHHHHHHHHHHC
T ss_pred hhceeeeccccCCccccHHHHhhhccc-----hhhHHHHHHHHHHhcCCH--hHhCcChhhcCHHHHHHHHHHHHHHhhC
Confidence 789999999877777899999887542 223356788999999997 48899999999999999999999996
Q ss_pred -----CCcEEEEeCCCCCCCHHHHHHHHHHHHHh-cCCcEEEEEcCCHHHHHHhcCEEEEEeCCEEEEEcCHHHHH
Q 002236 783 -----NPKVVYMDEPSTGLDPASRNNLWNVVKRA-KQGRAIILTTHSMEEAEALCDRLGIFVDGSLQCIGNPKELK 852 (949)
Q Consensus 783 -----~P~vllLDEPTsGLDp~sr~~l~~~L~~~-~~g~tIIltTH~meeae~l~drI~Im~~G~l~~~Gs~~~Lk 852 (949)
+|+|+||||||+||||.+++.++++|+++ ++|+|||++||+|+++..+|||+++|++|++++.|+++++.
T Consensus 145 p~~~p~p~llllDEPt~gLD~~~~~~i~~~i~~l~~~g~tii~vtHdl~~~~~~~dri~vl~~G~iv~~G~~~ev~ 220 (231)
T d1l7vc_ 145 PQANPAGQLLLLDEPMNSLDVAQQSALDKILSALCQQGLAIVMSSHDLNHTLRHAHRAWLLKGGKMLASGRREEVL 220 (231)
T ss_dssp TTTCTTCCEEEESSCSTTCCHHHHHHHHHHHHHHHHTTCEEEECCCCHHHHHHHCSBCCBEETTEECCCSBHHHHS
T ss_pred cccCCCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHCCEEEEEECCEEEEECCHHHHh
Confidence 77999999999999999999999999986 57999999999999999999999999999999999999884
No 19
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}
Probab=100.00 E-value=5.6e-44 Score=368.92 Aligned_cols=194 Identities=22% Similarity=0.378 Sum_probs=171.3
Q ss_pred cEEEEeEEEEcCCCCCCCccceeeeeEEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEcCeecCccHHHhhc
Q 002236 626 AIISDNLRKIYPGRDGNPEKVAVNGLSLALPSGECFGMLGPNGAGKTTFISMMIGITRTTSGTAYVQGLDIRTDMDRIYT 705 (949)
Q Consensus 626 ~I~v~nL~K~Y~~~~~~~~~~al~~lSl~v~~Gei~gLLG~NGAGKTTLlk~L~Gl~~ptsG~I~i~G~di~~~~~~~r~ 705 (949)
.|+++||+|.|+ +++|+||||+|++||++||+||||||||||+|+|+|+++|++|+|.++|+++. +.+.
T Consensus 2 ~lev~~ls~~y~-------~~vl~~is~~i~~Gei~~l~G~NGsGKSTLl~~i~gl~~p~~G~I~~~g~~i~----~~~~ 70 (200)
T d1sgwa_ 2 KLEIRDLSVGYD-------KPVLERITMTIEKGNVVNFHGPNGIGKTTLLKTISTYLKPLKGEIIYNGVPIT----KVKG 70 (200)
T ss_dssp EEEEEEEEEESS-------SEEEEEEEEEEETTCCEEEECCTTSSHHHHHHHHTTSSCCSEEEEEETTEEGG----GGGG
T ss_pred eEEEEEEEEEeC-------CeEEeceEEEEcCCCEEEEECCCCChHHHHHHHHhcccccCCCEEEECCEehh----HhcC
Confidence 489999999994 46999999999999999999999999999999999999999999999999885 3567
Q ss_pred cEEEEcCCCCCCCCCCHHHHHHHHhhhcCCCchhHHHHHHHHHHHcCCCCCCcccccCCCCChhHHHHHHHHHHHcCCCc
Q 002236 706 SMGVCPQEDLLWETLTGREHLLFYGRLKNLKGPALTQAVEESLKSVNLFHGGVADKQAGKYSGGMKRRLSVAISLIGNPK 785 (949)
Q Consensus 706 ~iG~~pQ~~~L~~~lTv~E~L~~~~~l~g~~~~~~~~~v~~~L~~l~L~~~~~~~~~~~~LSGGqKqRLslA~ALi~~P~ 785 (949)
+++|+||+..+++.+|++|++.+.+.+++.... ++++.+.++.+++.+ .++++++||||||||+++|+||+.+|+
T Consensus 71 ~i~~~~~~~~~~~~~t~~~~l~~~~~~~~~~~~--~~~~~~~l~~~~~~~---~~~~~~~LSgG~~qrv~ia~al~~~~~ 145 (200)
T d1sgwa_ 71 KIFFLPEEIIVPRKISVEDYLKAVASLYGVKVN--KNEIMDALESVEVLD---LKKKLGELSQGTIRRVQLASTLLVNAE 145 (200)
T ss_dssp GEEEECSSCCCCTTSBHHHHHHHHHHHTTCCCC--HHHHHHHHHHTTCCC---TTSBGGGSCHHHHHHHHHHHHTTSCCS
T ss_pred cEEEEeecccCCCCcCHHHHHHHHHHhcCCccC--HHHHHHHHHHcCCcc---cccccCcCCCcHHHHHHHHHHHhcCCC
Confidence 899999999999999999999999888876433 356778899998852 467789999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHh-cC-CcEEEEEcCCHHHHHHhcCEEEEEeC
Q 002236 786 VVYMDEPSTGLDPASRNNLWNVVKRA-KQ-GRAIILTTHSMEEAEALCDRLGIFVD 839 (949)
Q Consensus 786 vllLDEPTsGLDp~sr~~l~~~L~~~-~~-g~tIIltTH~meeae~l~drI~Im~~ 839 (949)
++||||||+|||+.+++.+++.|.+. ++ +.+||.++|++ .+||++.+|++
T Consensus 146 llllDEPt~gLD~~~~~~i~~~l~~~~~~~~~~ii~~~~~l----~~~D~~~~l~~ 197 (200)
T d1sgwa_ 146 IYVLDDPVVAIDEDSKHKVLKSILEILKEKGIVIISSREEL----SYCDVNENLHK 197 (200)
T ss_dssp EEEEESTTTTSCTTTHHHHHHHHHHHHHHHSEEEEEESSCC----TTSSEEEEGGG
T ss_pred EEEEcCcccccCHHHHHHHHHHHHHHHhCCCEEEEEEechh----hhcchhhheee
Confidence 99999999999999999999999885 43 56666666765 37999998854
No 20
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00 E-value=1e-43 Score=384.64 Aligned_cols=189 Identities=21% Similarity=0.349 Sum_probs=159.6
Q ss_pred cceeeeeEEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEcCeecCccHHHhhccEEEEcCCCCCCCCCCHHH
Q 002236 645 KVAVNGLSLALPSGECFGMLGPNGAGKTTFISMMIGITRTTSGTAYVQGLDIRTDMDRIYTSMGVCPQEDLLWETLTGRE 724 (949)
Q Consensus 645 ~~al~~lSl~v~~Gei~gLLG~NGAGKTTLlk~L~Gl~~ptsG~I~i~G~di~~~~~~~r~~iG~~pQ~~~L~~~lTv~E 724 (949)
+++|+||||+|++||++||+||||||||||+++|+|+++|++|+|.++| +|+|+||++.+++. |++|
T Consensus 49 ~pvL~~isl~i~~Ge~vaivG~nGsGKSTLl~~i~Gl~~p~~G~I~~~g------------~i~~v~Q~~~l~~~-tv~e 115 (281)
T d1r0wa_ 49 NPVLKNINLNIEKGEMLAITGSTGSGKTSLLMLILGELEASEGIIKHSG------------RVSFCSQFSWIMPG-TIKE 115 (281)
T ss_dssp CEEEEEEEEEECTTCEEEEEESTTSSHHHHHHHHHTSSCCSEEEEECCS------------CEEEECSSCCCCSE-EHHH
T ss_pred CeEEeCeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCcCCCcEEEECC------------EEEEEeccccccCc-eeec
Confidence 5799999999999999999999999999999999999999999999998 38999999999986 9999
Q ss_pred HHHHHhhhcCCCchhHHHHHHHHHHHcC-------CCC--CCcccccCCCCChhHHHHHHHHHHHcCCCcEEEEeCCCCC
Q 002236 725 HLLFYGRLKNLKGPALTQAVEESLKSVN-------LFH--GGVADKQAGKYSGGMKRRLSVAISLIGNPKVVYMDEPSTG 795 (949)
Q Consensus 725 ~L~~~~~l~g~~~~~~~~~v~~~L~~l~-------L~~--~~~~~~~~~~LSGGqKqRLslA~ALi~~P~vllLDEPTsG 795 (949)
|+.+.... .. ....++++..+ +.+ ....++...+|||||||||+|||||+.+|+|+||||||+|
T Consensus 116 ni~~~~~~---~~----~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~LSgGqkQRv~lARaL~~~p~illLDEPts~ 188 (281)
T d1r0wa_ 116 NIIFGVSY---DE----YRYKSVVKACQLQQDITKFAEQDNTVLGEGGVTLSGGQRARISLARAVYKDADLYLLDSPFGY 188 (281)
T ss_dssp HHTTTSCC---CH----HHHHHHHHHTTCHHHHTTSTTGGGCEECTTCTTSCHHHHHHHHHHHHHHSCCSEEEEESCCCS
T ss_pred cccccccc---cc----hHHHHHHHHHHhHHHHHhchhhhhhhhhhhccCCCHHHHHHHHHHHHHHhCccchhhcCcccc
Confidence 99764321 11 12223333332 221 1233456678999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHH-HHhcCCcEEEEEcCCHHHHHHhcCEEEEEeCCEEEEEcCHHHHHHh
Q 002236 796 LDPASRNNLWNVV-KRAKQGRAIILTTHSMEEAEALCDRLGIFVDGSLQCIGNPKELKAR 854 (949)
Q Consensus 796 LDp~sr~~l~~~L-~~~~~g~tIIltTH~meeae~l~drI~Im~~G~l~~~Gs~~~Lk~~ 854 (949)
|||.+++.+++.+ ...++|+|+|++||+++.+ +.||||++|++|++++.|++++|.+.
T Consensus 189 LD~~~~~~i~~~~~~~~~~~~tvi~itH~~~~l-~~aDrI~vl~~G~i~~~Gt~~eL~~~ 247 (281)
T d1r0wa_ 189 LDVFTEEQVFESCVCKLMANKTRILVTSKMEHL-RKADKILILHQGSSYFYGTFSELQSL 247 (281)
T ss_dssp SCHHHHHHHHHHCCCCCTTTSEEEEECSCHHHH-HTCSEEEEEETTEEEEEECHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhhCCCEEEEEechHHHH-HhCCEEEEEECCEEEEECCHHHHhcc
Confidence 9999999999864 4456799999999999877 57999999999999999999999764
No 21
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=99.80 E-value=1.3e-20 Score=198.79 Aligned_cols=84 Identities=27% Similarity=0.425 Sum_probs=74.1
Q ss_pred ccccCCCCChhHHH------HHHHHHHHcCCCcEEEEeCCCCCCCHHHHHHHHHHHHHh-cCCcEEEEEcCCHHHHHHhc
Q 002236 759 ADKQAGKYSGGMKR------RLSVAISLIGNPKVVYMDEPSTGLDPASRNNLWNVVKRA-KQGRAIILTTHSMEEAEALC 831 (949)
Q Consensus 759 ~~~~~~~LSGGqKq------RLslA~ALi~~P~vllLDEPTsGLDp~sr~~l~~~L~~~-~~g~tIIltTH~meeae~l~ 831 (949)
.+.++..+|||||| ||++|+++..+|++++|||||++|||..++.++++|+++ +++++||+|||+++.++ .+
T Consensus 195 ~~~~~~~lSgGe~~~~~la~~la~~~~l~~~~~llllDEp~~~Ld~~~~~~l~~~l~~~~~~~~qviv~TH~~~~~~-~~ 273 (292)
T g1f2t.1 195 KERPLTFLSGGERIALGLAFRLAMSLYLAGEISLLILDEPTPYLDEERRRKLITIMERYLKKIPQVILVSHDEELKD-AA 273 (292)
T ss_dssp EEECGGGSCHHHHHHHHHHHHHHHHHHHHSSCSEEEEESCSCTTCHHHHHHHHHHHHHTGGGSSEEEEEESCGGGGG-GC
T ss_pred hcCchhhcchHHHHHHHHHHHHHHhhhhcCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeecHHHHH-hC
Confidence 34567899999999 889999999999999999999999999999999999987 45789999999988765 68
Q ss_pred CEEEEE--eCCEEE
Q 002236 832 DRLGIF--VDGSLQ 843 (949)
Q Consensus 832 drI~Im--~~G~l~ 843 (949)
|||+.+ .+|...
T Consensus 274 D~ii~l~~~~g~~~ 287 (292)
T g1f2t.1 274 DHVIRISLENGSSK 287 (292)
T ss_dssp SEEEEEEEETTEEE
T ss_pred CEEEEEEecCCEEE
Confidence 999998 667643
No 22
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=99.60 E-value=4.4e-18 Score=167.51 Aligned_cols=152 Identities=11% Similarity=0.035 Sum_probs=102.8
Q ss_pred EEEECCCCCcHHHHHHHHhCCCCCCcceEEEcCeecCccHHHhhccEEEEcCC-----CCCCCCCCHHHHHHHHhhhcCC
Q 002236 661 FGMLGPNGAGKTTFISMMIGITRTTSGTAYVQGLDIRTDMDRIYTSMGVCPQE-----DLLWETLTGREHLLFYGRLKNL 735 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl~~ptsG~I~i~G~di~~~~~~~r~~iG~~pQ~-----~~L~~~lTv~E~L~~~~~l~g~ 735 (949)
++|.||||||||||+++|+|.++|+.|.+.+.|.+...... +.++..+. ..+... +..+. .+.
T Consensus 3 i~I~G~~G~GKSTLl~~i~~~l~~~~g~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~~----~~~--- 70 (178)
T d1ye8a1 3 IIITGEPGVGKTTLVKKIVERLGKRAIGFWTEEVRDPETKK----RTGFRIITTEGKKKIFSSK-FFTSK----KLV--- 70 (178)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHGGGEEEEEEEEEC----------CCEEEEEETTCCEEEEEET-TCCCS----SEE---
T ss_pred EEEECCCCcHHHHHHHHHHhcCCCCcceEEECCcchHHHHH----hhhhhhhhhhHHHHHHhhh-hhhhh----hhh---
Confidence 78999999999999999999999999999999876543221 22222111 000000 00000 000
Q ss_pred CchhHHHHHHHHHHHcCCCCCCcccccCCCCChhHHHHHHHHHHHcCCCcEEEEeCCCCCCCHHHHHHHHHHHHH-hc-C
Q 002236 736 KGPALTQAVEESLKSVNLFHGGVADKQAGKYSGGMKRRLSVAISLIGNPKVVYMDEPSTGLDPASRNNLWNVVKR-AK-Q 813 (949)
Q Consensus 736 ~~~~~~~~v~~~L~~l~L~~~~~~~~~~~~LSGGqKqRLslA~ALi~~P~vllLDEPTsGLDp~sr~~l~~~L~~-~~-~ 813 (949)
... ..+....++|+|+++|.++++++..+|+++++|||. .+....+.+++.+.+ ++ .
T Consensus 71 -------------~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~~~vlllDE~~--~~~~~~~~~~~~l~~~l~~~ 129 (178)
T d1ye8a1 71 -------------GSY------GVNVQYFEELAIPILERAYREAKKDRRKVIIIDEIG--KMELFSKKFRDLVRQIMHDP 129 (178)
T ss_dssp -------------TTE------EECHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCCS--TTGGGCHHHHHHHHHHHTCT
T ss_pred -------------hhh------hcCcchhhhhhhhhHHHHHHHHHhcCCCceeecCCC--ccchhhHHHHHHHHHHhccC
Confidence 000 112333458999999999999999999999999984 444445667777766 34 4
Q ss_pred CcEEEEEcCCHHHHHHhcCEEEEEeCCEEEEEc
Q 002236 814 GRAIILTTHSMEEAEALCDRLGIFVDGSLQCIG 846 (949)
Q Consensus 814 g~tIIltTH~meeae~l~drI~Im~~G~l~~~G 846 (949)
+.+||+++|+.+ ...+||++..+.+|++...+
T Consensus 130 ~~~il~~~h~~~-~~~~~~~i~~~~~~~i~~v~ 161 (178)
T d1ye8a1 130 NVNVVATIPIRD-VHPLVKEIRRLPGAVLIELT 161 (178)
T ss_dssp TSEEEEECCSSC-CSHHHHHHHTCTTCEEEECC
T ss_pred CCEEEEEEccHH-HHHhhceEEEEeCCEEEEEC
Confidence 789999999975 45689999999999988654
No 23
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=99.18 E-value=1.3e-10 Score=123.27 Aligned_cols=79 Identities=24% Similarity=0.283 Sum_probs=66.3
Q ss_pred ccCCCCChhHHHHHHHHHH----HcCCCcEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEcCCHHHHHHhcCEEEE
Q 002236 761 KQAGKYSGGMKRRLSVAIS----LIGNPKVVYMDEPSTGLDPASRNNLWNVVKRAKQGRAIILTTHSMEEAEALCDRLGI 836 (949)
Q Consensus 761 ~~~~~LSGGqKqRLslA~A----Li~~P~vllLDEPTsGLDp~sr~~l~~~L~~~~~g~tIIltTH~meeae~l~drI~I 836 (949)
.....+|+|+|+.+.++.. ...++.++++|||-++|+|...+.+.+.|++..++.-||+|||+.+.++ .+|++..
T Consensus 215 ~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~iDEpe~~Lhp~~~~~l~~~l~~~~~~~QviitTHsp~~~~-~~d~~~~ 293 (308)
T d1e69a_ 215 QKLSLLSGGEKALVGLALLFALMEIKPSPFYVLDEVDSPLDDYNAERFKRLLKENSKHTQFIVITHNKIVME-AADLLHG 293 (308)
T ss_dssp CBGGGSCHHHHHHHHHHHHHHHTTTSCCSEEEEESCCSSCCHHHHHHHHHHHHHHTTTSEEEEECCCTTGGG-GCSEEEE
T ss_pred chhhhhhHHHhhHHHHHhhhhhhhhccCchhhhhhccccCCHHHHHHHHHHHHHhccCCEEEEEECCHHHHH-hcccEEE
Confidence 3467899999998777664 4557799999999999999999999999998877889999999998775 5799866
Q ss_pred --EeCC
Q 002236 837 --FVDG 840 (949)
Q Consensus 837 --m~~G 840 (949)
|.+|
T Consensus 294 v~~~~g 299 (308)
T d1e69a_ 294 VTMVNG 299 (308)
T ss_dssp EEESSS
T ss_pred EEEeCC
Confidence 4444
No 24
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=99.13 E-value=3.9e-11 Score=126.60 Aligned_cols=80 Identities=28% Similarity=0.422 Sum_probs=68.9
Q ss_pred cccCCCCChhHHHHHHHHHHHc------CCCcEEEEeCCCCCCCHHHHHHHHHHHHHh-cCCcEEEEEcCCHHHHHHhcC
Q 002236 760 DKQAGKYSGGMKRRLSVAISLI------GNPKVVYMDEPSTGLDPASRNNLWNVVKRA-KQGRAIILTTHSMEEAEALCD 832 (949)
Q Consensus 760 ~~~~~~LSGGqKqRLslA~ALi------~~P~vllLDEPTsGLDp~sr~~l~~~L~~~-~~g~tIIltTH~meeae~l~d 832 (949)
+.++..||||||+++++|..|+ .+|+++++|||+++|||..++.+++.|+++ +++..+|+|||+.+..+ .||
T Consensus 273 ~~~~~~lS~Ge~~~~~la~~l~~~~~~~~~~~illiDEpe~~Lh~~~~~~l~~~l~~~~~~~~QviitTHs~~~~~-~~d 351 (369)
T g1ii8.1 273 ERPLTFLSGGERIALGLAFRLAMSLYLAGEISLLILDEPTPYLDEERRRKLITIMERYLKKIPQVILVSHDEELKD-AAD 351 (369)
T ss_dssp CCCGGGSCHHHHHHHHHHHHHHHHHHHHSSCSEEEEECCSSSSCSHHHHHHHHHHHHTGGGSSEEEEEESCGGGGG-TSS
T ss_pred eeeeeccchHHHHHHHHHHHHHHHHhcCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEechHHHHH-hCC
Confidence 4456789999999999886665 789999999999999999999999999996 45679999999987764 589
Q ss_pred EEEEE--eCC
Q 002236 833 RLGIF--VDG 840 (949)
Q Consensus 833 rI~Im--~~G 840 (949)
+++.+ .+|
T Consensus 352 ~~~~v~~~~g 361 (369)
T g1ii8.1 352 HVIRISLENG 361 (369)
T ss_dssp EEEEEEECSS
T ss_pred EEEEEEEeCC
Confidence 99887 455
No 25
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=98.90 E-value=7.6e-09 Score=110.42 Aligned_cols=76 Identities=18% Similarity=0.187 Sum_probs=64.9
Q ss_pred cCCCCChhHHHHHHHHHHHc----CCCcEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEcCCHHHHHHhcCEEEEE
Q 002236 762 QAGKYSGGMKRRLSVAISLI----GNPKVVYMDEPSTGLDPASRNNLWNVVKRAKQGRAIILTTHSMEEAEALCDRLGIF 837 (949)
Q Consensus 762 ~~~~LSGGqKqRLslA~ALi----~~P~vllLDEPTsGLDp~sr~~l~~~L~~~~~g~tIIltTH~meeae~l~drI~Im 837 (949)
....||+|++....++.++. .+|.++++|||-++|+|...+.+.+.+++..++.=+|+|||+....+. +|++..+
T Consensus 221 ~~~~ls~~~~~l~~l~~~~~~~~~~~~~~~~ide~e~~L~~~~~~~l~~~l~~~~~~~Q~iitTh~~~~~~~-~~~l~~i 299 (329)
T g1xew.1 221 RIEAMSGGEKALTALAFVFAIQKFKPAPFYLFDEIDAHLDDANVKRVADLIKESSKESQFIVITLRDVMMAN-ADKIIGV 299 (329)
T ss_dssp EGGGSCHHHHHHHHHHHHHHHHHHSCCSEEEEESTTTTSCHHHHHHHHHHHHHHTTTSEEEEECCCHHHHHH-CSEEEEE
T ss_pred ehhhhhhHHHHHHHHHHHHHHHhhcccchhhhhhHHhhcCHHHHHHHHHHHHHhccCCeEEEEeCCHHHHHh-hHhhcCE
Confidence 45679999999887776654 789999999999999999999999999988777789999999988764 7988766
Q ss_pred e
Q 002236 838 V 838 (949)
Q Consensus 838 ~ 838 (949)
.
T Consensus 300 ~ 300 (329)
T g1xew.1 300 S 300 (329)
T ss_dssp E
T ss_pred e
Confidence 3
No 26
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.57 E-value=5.8e-08 Score=106.19 Aligned_cols=77 Identities=19% Similarity=0.175 Sum_probs=63.4
Q ss_pred cccCCCCChhHHHHHHHHHHH----cCCCcEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEcCCHHHHHHhcCEE
Q 002236 760 DKQAGKYSGGMKRRLSVAISL----IGNPKVVYMDEPSTGLDPASRNNLWNVVKRAK-QGRAIILTTHSMEEAEALCDRL 834 (949)
Q Consensus 760 ~~~~~~LSGGqKqRLslA~AL----i~~P~vllLDEPTsGLDp~sr~~l~~~L~~~~-~g~tIIltTH~meeae~l~drI 834 (949)
.+....||||||.++++|..+ ..++++++||||+++||+..++.+.++|.+.. .+.-+|+|||+.+.++ .+|++
T Consensus 327 ~~~~~~lSgGEk~~~~lal~lal~~~~~~pililDE~d~~Ld~~~~~~~~~~l~~~~~~~~Q~I~iTH~~~~~~-~ad~~ 405 (427)
T d1w1wa_ 327 FKDMEYLSGGEKTVAALALLFAINSYQPSPFFVLDEVDAALDITNVQRIAAYIRRHRNPDLQFIVISLKNTMFE-KSDAL 405 (427)
T ss_dssp CCCGGGSCHHHHHHHHHHHHHHHHTSSCCSEEEESSTTTTCCHHHHHHHHHHHHHHCBTTBEEEEECSCHHHHT-TCSEE
T ss_pred hhhhhhhccchHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHH-hcccE
Confidence 345577999999998776543 56788999999999999999999999998864 4667999999988665 58997
Q ss_pred EEE
Q 002236 835 GIF 837 (949)
Q Consensus 835 ~Im 837 (949)
+.+
T Consensus 406 ~~V 408 (427)
T d1w1wa_ 406 VGV 408 (427)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 27
>d1ewqa2 c.37.1.12 (A:542-765) DNA repair protein MutS, the C-terminal domain {Thermus aquaticus [TaxId: 271]}
Probab=98.08 E-value=8.1e-06 Score=83.43 Aligned_cols=56 Identities=14% Similarity=0.208 Sum_probs=41.5
Q ss_pred HHHHHHHHcCCCcEEEEeCCCCCCCHHHHHHHHHHHHH-h-cCCcEEEEEcCCHHHHH
Q 002236 773 RLSVAISLIGNPKVVYMDEPSTGLDPASRNNLWNVVKR-A-KQGRAIILTTHSMEEAE 828 (949)
Q Consensus 773 RLslA~ALi~~P~vllLDEPTsGLDp~sr~~l~~~L~~-~-~~g~tIIltTH~meeae 828 (949)
|++-..--+.+..++|+||+..|=||.....+...+.+ + +.+..++++||..+..+
T Consensus 104 ~~~~il~~~~~~sLvliDE~~~gT~~~eg~ala~aile~L~~~~~~~i~tTH~~eL~~ 161 (224)
T d1ewqa2 104 EVALILKEATENSLVLLDEVGRGTSSLDGVAIATAVAEALHERRAYTLFATHYFELTA 161 (224)
T ss_dssp HHHHHHHHCCTTEEEEEESTTTTSCHHHHHHHHHHHHHHHHHHTCEEEEECCCHHHHT
T ss_pred HHHHHhccCCCCcEEeecccccCcchhhhcchHHHHHHHHhhcCcceEEeeechhhhh
Confidence 33333344466779999999999999988877666544 4 45788999999977654
No 28
>d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=97.97 E-value=1.7e-05 Score=81.52 Aligned_cols=55 Identities=16% Similarity=0.112 Sum_probs=39.9
Q ss_pred HHHHHHHcCCCcEEEEeCCCCCCCHHHHHHHHH-HHHHh-c-CCcEEEEEcCCHHHHH
Q 002236 774 LSVAISLIGNPKVVYMDEPSTGLDPASRNNLWN-VVKRA-K-QGRAIILTTHSMEEAE 828 (949)
Q Consensus 774 LslA~ALi~~P~vllLDEPTsGLDp~sr~~l~~-~L~~~-~-~g~tIIltTH~meeae 828 (949)
++-+.--+.+..++|+||+..|=||.....+.. +++.+ . .+..+|+|||..+..+
T Consensus 111 ~~~il~~~~~~sLvliDE~~~gT~~~eg~~l~~a~l~~l~~~~~~~~i~tTH~~~l~~ 168 (234)
T d1wb9a2 111 TANILHNATEYSLVLMDEIGRGTSTYDGLSLAWACAENLANKIKALTLFATHYFELTQ 168 (234)
T ss_dssp HHHHHHHCCTTEEEEEESCCCCSSSSHHHHHHHHHHHHHHHTTCCEEEEECSCGGGGG
T ss_pred HHHHHHhcccccEEeecccccCCChhhhhHHHHHhhhhhhccccceEEEecchHHHhh
Confidence 333333455667999999999999999988754 45554 3 3568999999876543
No 29
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=96.94 E-value=0.00031 Score=72.47 Aligned_cols=32 Identities=19% Similarity=0.471 Sum_probs=28.0
Q ss_pred eeeeeEEEEeCCcEEEEECCCCCcHHHHHHHHh
Q 002236 647 AVNGLSLALPSGECFGMLGPNGAGKTTFISMMI 679 (949)
Q Consensus 647 al~~lSl~v~~Gei~gLLG~NGAGKTTLlk~L~ 679 (949)
.++++++++.+| ++.|+|+|||||||++..|.
T Consensus 13 ~~~~~~i~~~~~-~~vi~G~NgsGKTtileAI~ 44 (369)
T g1ii8.1 13 SHSDTVVEFKEG-INLIIGQNGSGKSSLLDAIL 44 (369)
T ss_dssp SCSSEEEECCSE-EEEEECCTTSSHHHHHHHHH
T ss_pred cCcCeEEEcCCC-eEEEECCCCCCHHHHHHHHH
Confidence 567888888877 88899999999999999873
No 30
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]}
Probab=96.66 E-value=4.8e-05 Score=72.71 Aligned_cols=35 Identities=23% Similarity=0.281 Sum_probs=30.0
Q ss_pred eeeeeEEEEeCCcEEEEECCCCCcHHHHHHHHhCCC
Q 002236 647 AVNGLSLALPSGECFGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 647 al~~lSl~v~~Gei~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
.+++.++++.+| ++.|+|+|||||||++..|.-.+
T Consensus 14 ~~~~~~i~f~~~-~tvi~G~NGsGKStil~Ai~~~L 48 (222)
T d1qhla_ 14 GFFARTFDLDEL-VTTLSGGNGAGKSTTMAAFVTAL 48 (222)
T ss_dssp TEEEEEECHHHH-HHHHHSCCSHHHHHHHHHHHHHH
T ss_pred CEeeEEEEcCCC-eEEEECCCCCCHHHHHHHHHHHh
Confidence 567888888876 99999999999999999997443
No 31
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.24 E-value=0.0095 Score=57.18 Aligned_cols=43 Identities=26% Similarity=0.190 Sum_probs=31.3
Q ss_pred cEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEcCCHHHHHH
Q 002236 785 KVVYMDEPSTGLDPASRNNLWNVVKRAKQGRAIILTTHSMEEAEA 829 (949)
Q Consensus 785 ~vllLDEPTsGLDp~sr~~l~~~L~~~~~g~tIIltTH~meeae~ 829 (949)
.-+++| .++++...|+.+.++.++..-...++....+.+.+.+
T Consensus 66 ~~vIiD--~t~~~~~~R~~~~~~a~~~~~~~~~v~l~~~~e~~~~ 108 (172)
T d1yj5a2 66 KRVVID--NTNPDVPSRARYIQCAKDAGVPCRCFNFCATIEQARH 108 (172)
T ss_dssp CCEEEE--SCCCSHHHHHHHHHHHHHHTCCEEEEEECCCHHHHHH
T ss_pred CCceee--CcCCCHHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHH
Confidence 447788 6678999999988887776555566666667776654
No 32
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=96.21 E-value=0.00059 Score=63.96 Aligned_cols=24 Identities=25% Similarity=0.337 Sum_probs=21.2
Q ss_pred EEEEECCCCCcHHHHHHHHhCCCC
Q 002236 660 CFGMLGPNGAGKTTFISMMIGITR 683 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~Gl~~ 683 (949)
+++|.|++|||||||++.|...+.
T Consensus 4 vi~itG~~GSGKTTL~~~L~~~l~ 27 (170)
T d1np6a_ 4 LLAFAAWSGTGKTTLLKKLIPALC 27 (170)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHH
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHH
Confidence 789999999999999999986544
No 33
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
Probab=96.21 E-value=0.0072 Score=61.60 Aligned_cols=35 Identities=26% Similarity=0.395 Sum_probs=30.2
Q ss_pred cceeeeeEEEEeCCcEEEEECCCCCcHHHHHHHHh
Q 002236 645 KVAVNGLSLALPSGECFGMLGPNGAGKTTFISMMI 679 (949)
Q Consensus 645 ~~al~~lSl~v~~Gei~gLLG~NGAGKTTLlk~L~ 679 (949)
.+.|+++.-.+.+||++.|.|+.|+||||++.-|+
T Consensus 22 ~~~lD~~~~G~~~G~l~vi~G~~G~GKT~~~~~la 56 (277)
T d1cr2a_ 22 CTGINDKTLGARGGEVIMVTSGSGMGKSTFVRQQA 56 (277)
T ss_dssp CTTHHHHHCSBCTTCEEEEECSTTSSHHHHHHHHH
T ss_pred chhHHHHhcCCCCCeEEEEEeCCCCCHHHHHHHHH
Confidence 45777777679999999999999999999987765
No 34
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=96.20 E-value=0.0055 Score=61.29 Aligned_cols=98 Identities=16% Similarity=0.168 Sum_probs=50.9
Q ss_pred CCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEcCeecCccHHHhhccEEEEcCCCCCCCCCCHHHHHHHHhhhcCCC
Q 002236 657 SGECFGMLGPNGAGKTTFISMMIGITRTTSGTAYVQGLDIRTDMDRIYTSMGVCPQEDLLWETLTGREHLLFYGRLKNLK 736 (949)
Q Consensus 657 ~Gei~gLLG~NGAGKTTLlk~L~Gl~~ptsG~I~i~G~di~~~~~~~r~~iG~~pQ~~~L~~~lTv~E~L~~~~~l~g~~ 736 (949)
.-.++.|+||+|+||||++-=|+-.++ +..++++++-=+.. ..-..|.|..|+++
T Consensus 11 ~p~vi~lvGptGvGKTTTiAKLA~~~~------------------~~g~kV~lit~Dt~---R~ga~eQL~~~a~~---- 65 (211)
T d1j8yf2 11 IPYVIMLVGVQGTGKATTAGKLAYFYK------------------KKGFKVGLVGADVY---RPAALEQLQQLGQQ---- 65 (211)
T ss_dssp SSEEEEEECSCCC----HHHHHHHHHH------------------HTTCCEEEEECCCS---SHHHHHHHHHHHHH----
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHH------------------HCCCceEEEEeecc---ccchhHHHHHhccc----
Confidence 346899999999999999866654332 11234666554421 11244555555544
Q ss_pred chhHHHHHHHHHHHcCCCCCCcccccCCCCChhHHHHHHHHHHHcCCCcEEEEeCCCCCCCHH
Q 002236 737 GPALTQAVEESLKSVNLFHGGVADKQAGKYSGGMKRRLSVAISLIGNPKVVYMDEPSTGLDPA 799 (949)
Q Consensus 737 ~~~~~~~v~~~L~~l~L~~~~~~~~~~~~LSGGqKqRLslA~ALi~~P~vllLDEPTsGLDp~ 799 (949)
+|+.- ..-....++..-.++ ++..+...+-+++|.| |+|..+.
T Consensus 66 --------------l~v~~--~~~~~~~~~~~~~~~--a~~~~~~~~~d~IlID--TaGr~~~ 108 (211)
T d1j8yf2 66 --------------IGVPV--YGEPGEKDVVGIAKR--GVEKFLSEKMEIIIVD--TAGRHGY 108 (211)
T ss_dssp --------------HTCCE--ECCTTCCCHHHHHHH--HHHHHHHTTCSEEEEE--CCCSCCT
T ss_pred --------------cCcce--eecccchhhhHHHHH--HHHHhhccCCceEEEe--cCCcCcc
Confidence 33320 111122222222222 4555567789999999 8887543
No 35
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=96.16 E-value=0.0014 Score=66.38 Aligned_cols=34 Identities=18% Similarity=0.263 Sum_probs=26.9
Q ss_pred CCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEE
Q 002236 657 SGECFGMLGPNGAGKTTFISMMIGITRTTSGTAY 690 (949)
Q Consensus 657 ~Gei~gLLG~NGAGKTTLlk~L~Gl~~ptsG~I~ 690 (949)
+|++.+++|++|+|||||+|.|.|-.....|+|.
T Consensus 94 ~~kt~~~~G~SGVGKSTLiN~L~~~~~~~T~~vs 127 (225)
T d1u0la2 94 KGKISTMAGLSGVGKSSLLNAINPGLKLRVSEVS 127 (225)
T ss_dssp SSSEEEEECSTTSSHHHHHHHHSTTCCCC-----
T ss_pred cCCeEEEECCCCCCHHHHHHhhcchhhhhccCcc
Confidence 5899999999999999999999998777777764
No 36
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.09 E-value=0.0013 Score=63.40 Aligned_cols=26 Identities=23% Similarity=0.409 Sum_probs=23.7
Q ss_pred CcEEEEECCCCCcHHHHHHHHhCCCC
Q 002236 658 GECFGMLGPNGAGKTTFISMMIGITR 683 (949)
Q Consensus 658 Gei~gLLG~NGAGKTTLlk~L~Gl~~ 683 (949)
|.++.|+||+||||||+++.|....+
T Consensus 2 G~iivl~GpsG~GK~tl~~~L~~~~~ 27 (182)
T d1znwa1 2 GRVVVLSGPSAVGKSTVVRCLRERIP 27 (182)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHST
T ss_pred CeEEEEECCCCCCHHHHHHHHHhhCC
Confidence 88999999999999999999987654
No 37
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.90 E-value=0.00067 Score=63.81 Aligned_cols=36 Identities=22% Similarity=0.229 Sum_probs=29.8
Q ss_pred EEEEECCCCCcHHHHHHHHhCCCCCCcceEEEcCee
Q 002236 660 CFGMLGPNGAGKTTFISMMIGITRTTSGTAYVQGLD 695 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~Gl~~ptsG~I~i~G~d 695 (949)
.+.|.||+|+|||||++.+...+....+.+.+.+.+
T Consensus 3 ~v~ItG~~GtGKTtl~~~i~~~l~~~~~~v~~~~~~ 38 (189)
T d2i3ba1 3 HVFLTGPPGVGKTTLIHKASEVLKSSGVPVDGFYTE 38 (189)
T ss_dssp CEEEESCCSSCHHHHHHHHHHHHHHTTCCCEEEECC
T ss_pred EEEEECCCCCcHHHHHHHHHHHHHHCCCEEEEEEec
Confidence 578999999999999999999988777666555444
No 38
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]}
Probab=95.84 E-value=0.033 Score=56.13 Aligned_cols=47 Identities=9% Similarity=0.131 Sum_probs=31.8
Q ss_pred HHHcCCCcEEEEeCCCC-----CCCHHHHHHHHHHHHHh-c-CCcEEEEEcCCH
Q 002236 778 ISLIGNPKVVYMDEPST-----GLDPASRNNLWNVVKRA-K-QGRAIILTTHSM 824 (949)
Q Consensus 778 ~ALi~~P~vllLDEPTs-----GLDp~sr~~l~~~L~~~-~-~g~tIIltTH~m 824 (949)
..-+.+|+++++|--++ --|....+.+.+.|+.. + .|.+||++.|--
T Consensus 127 ~~~~~~~~lvviD~l~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~vi~v~H~~ 180 (274)
T d1nlfa_ 127 KRAAEGRRLMVLDTLRRFHIEEENASGPMAQVIGRMEAIAADTGCSIVFLHHAS 180 (274)
T ss_dssp HHHHTTCSEEEEECGGGGCCSCTTCHHHHHHHHHHHHHHHHHHCCEEEEEEEC-
T ss_pred HHhccCccEEecCchhhhccccccchhhHHHHHHHHHHHhhcCCCceehhhhcc
Confidence 34567999999995432 22556666677777664 3 489999998853
No 39
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=95.76 E-value=0.0022 Score=60.09 Aligned_cols=27 Identities=19% Similarity=0.319 Sum_probs=24.0
Q ss_pred eCCcEEEEECCCCCcHHHHHHHHhCCC
Q 002236 656 PSGECFGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 656 ~~Gei~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
+++.++.|.|++||||||+.+.|+..+
T Consensus 4 ~~~~iivl~G~~GsGKsT~a~~La~~l 30 (171)
T d1knqa_ 4 HDHHIYVLMGVSGSGKSAVASEVAHQL 30 (171)
T ss_dssp TTSEEEEEECSTTSCHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHh
Confidence 467899999999999999999998644
No 40
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.59 E-value=0.0032 Score=67.46 Aligned_cols=28 Identities=21% Similarity=0.585 Sum_probs=23.6
Q ss_pred EEEEeCCcEEEEECCCCCcHHHHHHHHh
Q 002236 652 SLALPSGECFGMLGPNGAGKTTFISMMI 679 (949)
Q Consensus 652 Sl~v~~Gei~gLLG~NGAGKTTLlk~L~ 679 (949)
.+++.++.+.+|+|+|||||||++..|.
T Consensus 19 ~i~f~~~~l~~i~G~NGsGKS~ileAi~ 46 (427)
T d1w1wa_ 19 KVGFGESNFTSIIGPNGSGKSNMMDAIS 46 (427)
T ss_dssp EEECTTCSEEEEECSTTSSHHHHHHHHH
T ss_pred EEeCCCCCEEEEECCCCCCHHHHHHHHH
Confidence 3555656699999999999999999984
No 41
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=95.56 E-value=0.0013 Score=66.87 Aligned_cols=34 Identities=12% Similarity=0.192 Sum_probs=22.9
Q ss_pred CCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEE
Q 002236 657 SGECFGMLGPNGAGKTTFISMMIGITRTTSGTAY 690 (949)
Q Consensus 657 ~Gei~gLLG~NGAGKTTLlk~L~Gl~~ptsG~I~ 690 (949)
+|.+..++|++|+|||||+|.|.|-..-..|+|.
T Consensus 96 ~~~~~vl~G~SGVGKSSLiN~L~~~~~~~t~~vs 129 (231)
T d1t9ha2 96 QDKTTVFAGQSGVGKSSLLNAISPELGLRTNEIS 129 (231)
T ss_dssp TTSEEEEEESHHHHHHHHHHHHCC----------
T ss_pred ccceEEEECCCCccHHHHHHhhccHhHhhhcccc
Confidence 5889999999999999999999998777777775
No 42
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=95.54 E-value=0.0032 Score=58.99 Aligned_cols=26 Identities=23% Similarity=0.465 Sum_probs=23.9
Q ss_pred CCcEEEEECCCCCcHHHHHHHHhCCC
Q 002236 657 SGECFGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 657 ~Gei~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
.|+++.|.|++||||||+.+.|...+
T Consensus 3 ~g~iI~l~G~~GsGKSTia~~La~~l 28 (176)
T d1zp6a1 3 GGNILLLSGHPGSGKSTIAEALANLP 28 (176)
T ss_dssp TTEEEEEEECTTSCHHHHHHHHHTCS
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHh
Confidence 58999999999999999999998765
No 43
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=95.50 E-value=0.0019 Score=61.12 Aligned_cols=26 Identities=19% Similarity=0.376 Sum_probs=22.1
Q ss_pred cEEEEECCCCCcHHHHHHHHhCCCCC
Q 002236 659 ECFGMLGPNGAGKTTFISMMIGITRT 684 (949)
Q Consensus 659 ei~gLLG~NGAGKTTLlk~L~Gl~~p 684 (949)
.+++|.|.+|||||||++-|...++.
T Consensus 2 kii~I~G~~gSGKTTli~~l~~~L~~ 27 (165)
T d1xjca_ 2 NVWQVVGYKHSGKTTLMEKWVAAAVR 27 (165)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHHH
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHHHh
Confidence 37899999999999999888776554
No 44
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.39 E-value=0.0067 Score=60.60 Aligned_cols=43 Identities=19% Similarity=0.304 Sum_probs=33.2
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEcCCHH
Q 002236 782 GNPKVVYMDEPSTGLDPASRNNLWNVVKRAKQGRAIILTTHSME 825 (949)
Q Consensus 782 ~~P~vllLDEPTsGLDp~sr~~l~~~L~~~~~g~tIIltTH~me 825 (949)
.+.+++++||.-. |...+...+.+.+.+......+|++|++.+
T Consensus 130 ~~~~iiiide~d~-l~~~~~~~l~~~~e~~~~~~~~Il~tn~~~ 172 (252)
T d1sxje2 130 HRYKCVIINEANS-LTKDAQAALRRTMEKYSKNIRLIMVCDSMS 172 (252)
T ss_dssp -CCEEEEEECTTS-SCHHHHHHHHHHHHHSTTTEEEEEEESCSC
T ss_pred CCceEEEeccccc-cccccchhhhcccccccccccceeeecccc
Confidence 3567999999954 888888888888876655667888988864
No 45
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=95.34 E-value=0.0039 Score=58.18 Aligned_cols=27 Identities=15% Similarity=0.101 Sum_probs=23.8
Q ss_pred eCCcEEEEECCCCCcHHHHHHHHhCCC
Q 002236 656 PSGECFGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 656 ~~Gei~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
++|-++.|.|+.||||||+-+.|+--+
T Consensus 4 ~~g~~I~l~G~~GsGKTTia~~La~~L 30 (183)
T d1m8pa3 4 TQGFTIFLTGYMNSGKDAIARALQVTL 30 (183)
T ss_dssp TCCEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHH
Confidence 479999999999999999999998543
No 46
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=95.29 E-value=0.0064 Score=57.96 Aligned_cols=23 Identities=17% Similarity=0.406 Sum_probs=20.5
Q ss_pred EEEEECCCCCcHHHHHHHHhCCC
Q 002236 660 CFGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
-+|++|+.|+|||||++.|+|-.
T Consensus 10 kV~iiG~~~~GKSTLin~l~~~~ 32 (186)
T d1mkya2 10 KVAIVGRPNVGKSTLFNAILNKE 32 (186)
T ss_dssp EEEEECSTTSSHHHHHHHHHTST
T ss_pred EEEEECCCCCCHHHHHHHHHCCC
Confidence 37999999999999999999843
No 47
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=95.20 E-value=0.099 Score=51.64 Aligned_cols=26 Identities=23% Similarity=0.272 Sum_probs=21.2
Q ss_pred CCcEEEEECCCCCcHHHHHHHHhCCC
Q 002236 657 SGECFGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 657 ~Gei~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
+..++.|+||||+||||++-=|+-.+
T Consensus 9 ~~~vi~lvGp~GvGKTTTiaKLA~~~ 34 (207)
T d1ls1a2 9 DRNLWFLVGLQGSGKTTTAAKLALYY 34 (207)
T ss_dssp SSEEEEEECCTTTTHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHH
Confidence 35689999999999999997776543
No 48
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=95.02 E-value=0.049 Score=53.66 Aligned_cols=26 Identities=23% Similarity=0.350 Sum_probs=23.1
Q ss_pred EeCCcEEEEECCCCCcHHHHHHHHhC
Q 002236 655 LPSGECFGMLGPNGAGKTTFISMMIG 680 (949)
Q Consensus 655 v~~Gei~gLLG~NGAGKTTLlk~L~G 680 (949)
+++|.++.|.|+.|+||||+..-++-
T Consensus 23 i~~gsl~li~G~pGsGKT~l~~qia~ 48 (242)
T d1tf7a2 23 FFKDSIILATGATGTGKTLLVSRFVE 48 (242)
T ss_dssp EESSCEEEEEECTTSSHHHHHHHHHH
T ss_pred CcCCeEEEEEeCCCCCHHHHHHHHHH
Confidence 88999999999999999999866643
No 49
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}
Probab=95.00 E-value=0.0043 Score=59.97 Aligned_cols=23 Identities=26% Similarity=0.514 Sum_probs=20.7
Q ss_pred EEEEECCCCCcHHHHHHHHhCCC
Q 002236 660 CFGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
.++|+|+.|||||||++.|+|.-
T Consensus 25 ~I~lvG~~n~GKSTLin~L~g~~ 47 (195)
T d1svia_ 25 EIALAGRSNVGKSSFINSLINRK 47 (195)
T ss_dssp EEEEEEBTTSSHHHHHHHHHTC-
T ss_pred EEEEECCCCCCHHHHHHHhcCCC
Confidence 49999999999999999999953
No 50
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}
Probab=94.95 E-value=0.0062 Score=60.40 Aligned_cols=26 Identities=27% Similarity=0.584 Sum_probs=23.1
Q ss_pred CCcEEEEECCCCCcHHHHHHHHhCCC
Q 002236 657 SGECFGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 657 ~Gei~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
+|.++.|+||+|+|||||++.|.-..
T Consensus 1 ~G~livi~GPSG~GK~tl~~~L~~~~ 26 (205)
T d1s96a_ 1 QGTLYIVSAPSGAGKSSLIQALLKTQ 26 (205)
T ss_dssp CCCEEEEECCTTSCHHHHHHHHHHHS
T ss_pred CCeEEEEECCCCCCHHHHHHHHHhhC
Confidence 58999999999999999999887654
No 51
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=94.84 E-value=0.11 Score=51.59 Aligned_cols=24 Identities=38% Similarity=0.371 Sum_probs=19.9
Q ss_pred cEEEEECCCCCcHHHHHHHHhCCC
Q 002236 659 ECFGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 659 ei~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
.+++++||+|+||||++-=|+-.+
T Consensus 10 ~vi~lvGptGvGKTTTiAKLA~~~ 33 (211)
T d2qy9a2 10 FVILMVGVNGVGKTTTIGKLARQF 33 (211)
T ss_dssp EEEEEECCTTSCHHHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHHH
Confidence 589999999999999986666443
No 52
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=94.68 E-value=0.0079 Score=56.34 Aligned_cols=25 Identities=24% Similarity=0.288 Sum_probs=21.8
Q ss_pred cEEEEECCCCCcHHHHHHHHhCCCC
Q 002236 659 ECFGMLGPNGAGKTTFISMMIGITR 683 (949)
Q Consensus 659 ei~gLLG~NGAGKTTLlk~L~Gl~~ 683 (949)
.+++|.|+.||||||+.+.|+-.+.
T Consensus 2 kiI~i~G~~GsGKsT~~~~L~~~l~ 26 (190)
T d1khta_ 2 KVVVVTGVPGVGSTTSSQLAMDNLR 26 (190)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHH
Confidence 5899999999999999999975543
No 53
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=94.67 E-value=0.0081 Score=56.10 Aligned_cols=27 Identities=30% Similarity=0.469 Sum_probs=23.4
Q ss_pred eCCcEEEEECCCCCcHHHHHHHHhCCC
Q 002236 656 PSGECFGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 656 ~~Gei~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
++|-.+.|.||.||||||+.+.|+--+
T Consensus 3 pk~~~I~i~G~~GsGKTT~~~~La~~l 29 (174)
T d1y63a_ 3 PKGINILITGTPGTGKTSMAEMIAAEL 29 (174)
T ss_dssp CSSCEEEEECSTTSSHHHHHHHHHHHS
T ss_pred CCCCEEEEEeCCCCCHHHHHHHHHHHh
Confidence 456788999999999999999998654
No 54
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=94.64 E-value=0.0072 Score=59.73 Aligned_cols=21 Identities=29% Similarity=0.381 Sum_probs=19.3
Q ss_pred EEEEECCCCCcHHHHHHHHhC
Q 002236 660 CFGMLGPNGAGKTTFISMMIG 680 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~G 680 (949)
+++++||.|||||||++-|..
T Consensus 2 vi~v~G~~GsGKTTLl~~ll~ 22 (244)
T d1yrba1 2 IVVFVGTAGSGKTTLTGEFGR 22 (244)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEEcCCCCcHHHHHHHHHH
Confidence 689999999999999999974
No 55
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=94.59 E-value=0.007 Score=60.34 Aligned_cols=58 Identities=22% Similarity=0.340 Sum_probs=37.1
Q ss_pred CCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEcCeecCccHHHhhccEEEEcCCCCCCCCCCHHHHHHHHhhhcCC
Q 002236 657 SGECFGMLGPNGAGKTTFISMMIGITRTTSGTAYVQGLDIRTDMDRIYTSMGVCPQEDLLWETLTGREHLLFYGRLKNL 735 (949)
Q Consensus 657 ~Gei~gLLG~NGAGKTTLlk~L~Gl~~ptsG~I~i~G~di~~~~~~~r~~iG~~pQ~~~L~~~lTv~E~L~~~~~l~g~ 735 (949)
++.+++++||+|+||||++-=|+-.+.- . .++++++-=+.. ..-..|.|.-|+++-++
T Consensus 5 ~~~vi~lvGptGvGKTTTiaKLA~~~~~-~-----------------g~kV~lit~Dt~---R~gA~eQL~~~a~~l~i 62 (207)
T d1okkd2 5 KGRVVLVVGVNGVGKTTTIAKLGRYYQN-L-----------------GKKVMFCAGDTF---RAAGGTQLSEWGKRLSI 62 (207)
T ss_dssp SSSEEEEECSTTSSHHHHHHHHHHHHHT-T-----------------TCCEEEECCCCS---STTHHHHHHHHHHHHTC
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHH-C-----------------CCcEEEEEeccc---cccchhhHhhcccccCc
Confidence 5789999999999999998666644321 1 134555544321 23467777777765544
No 56
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=94.50 E-value=0.0098 Score=55.27 Aligned_cols=26 Identities=15% Similarity=0.243 Sum_probs=23.4
Q ss_pred CcEEEEECCCCCcHHHHHHHHhCCCC
Q 002236 658 GECFGMLGPNGAGKTTFISMMIGITR 683 (949)
Q Consensus 658 Gei~gLLG~NGAGKTTLlk~L~Gl~~ 683 (949)
..++.|.|++||||||+.+.|...+.
T Consensus 3 ~kiI~l~G~~GsGKsTva~~L~~~l~ 28 (178)
T d1qhxa_ 3 TRMIILNGGSSAGKSGIVRCLQSVLP 28 (178)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHSS
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHcC
Confidence 46899999999999999999998774
No 57
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=94.45 E-value=0.0083 Score=55.95 Aligned_cols=23 Identities=17% Similarity=0.483 Sum_probs=20.9
Q ss_pred EEEEECCCCCcHHHHHHHHhCCC
Q 002236 660 CFGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
.++|.|+.|+|||||.+.|+-.+
T Consensus 9 ~I~i~G~~GsGKTTla~~La~~~ 31 (192)
T d1lw7a2 9 TVAILGGESSGKSVLVNKLAAVF 31 (192)
T ss_dssp EEEEECCTTSHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHh
Confidence 57899999999999999998765
No 58
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=94.39 E-value=0.0097 Score=54.53 Aligned_cols=34 Identities=24% Similarity=0.323 Sum_probs=24.5
Q ss_pred cEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEcCee
Q 002236 659 ECFGMLGPNGAGKTTFISMMIGITRTTSGTAYVQGLD 695 (949)
Q Consensus 659 ei~gLLG~NGAGKTTLlk~L~Gl~~ptsG~I~i~G~d 695 (949)
+++.|.|+.||||||+.+-|..- ..|.+.++..+
T Consensus 3 klIii~G~pGsGKTTla~~L~~~---~~~~~~~~~d~ 36 (152)
T d1ly1a_ 3 KIILTIGCPGSGKSTWAREFIAK---NPGFYNINRDD 36 (152)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHH---STTEEEECHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHh---CCCCEEechHH
Confidence 47889999999999999976432 23556655443
No 59
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=94.25 E-value=0.011 Score=55.83 Aligned_cols=22 Identities=23% Similarity=0.587 Sum_probs=20.3
Q ss_pred EEEEECCCCCcHHHHHHHHhCC
Q 002236 660 CFGMLGPNGAGKTTFISMMIGI 681 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~Gl 681 (949)
+++|+|..|+|||||++.|+|-
T Consensus 7 ~I~iiG~~nvGKSSLin~L~~~ 28 (179)
T d1egaa1 7 FIAIVGRPNVGKSTLLNKLLGQ 28 (179)
T ss_dssp EEEEECSSSSSHHHHHHHHHTC
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 4799999999999999999984
No 60
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=94.19 E-value=0.0089 Score=56.63 Aligned_cols=21 Identities=29% Similarity=0.428 Sum_probs=19.9
Q ss_pred EEEECCCCCcHHHHHHHHhCC
Q 002236 661 FGMLGPNGAGKTTFISMMIGI 681 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl 681 (949)
++|+|+.|||||||++.|+|-
T Consensus 3 I~lvG~~nvGKSsLin~l~~~ 23 (184)
T d2cxxa1 3 IIFAGRSNVGKSTLIYRLTGK 23 (184)
T ss_dssp EEEEEBTTSSHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 789999999999999999985
No 61
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=94.19 E-value=0.011 Score=55.58 Aligned_cols=23 Identities=17% Similarity=0.348 Sum_probs=20.1
Q ss_pred EEEEECCCCCcHHHHHHHHhCCC
Q 002236 660 CFGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
+++|+|+.|+|||||++.|+|..
T Consensus 2 ~V~liG~~n~GKSsLi~~L~~~~ 24 (171)
T d1mkya1 2 TVLIVGRPNVGKSTLFNKLVKKK 24 (171)
T ss_dssp EEEEECCTTSSHHHHHHHHHC--
T ss_pred EEEEECCCCCCHHHHHHHHhCCC
Confidence 58999999999999999999853
No 62
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.18 E-value=0.015 Score=52.96 Aligned_cols=21 Identities=38% Similarity=0.532 Sum_probs=19.3
Q ss_pred EEEECCCCCcHHHHHHHHhCC
Q 002236 661 FGMLGPNGAGKTTFISMMIGI 681 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl 681 (949)
++|+|+.|+|||||++.|+|-
T Consensus 3 I~liG~~nvGKSSLln~l~~~ 23 (166)
T d2qtvb1 3 LLFLGLDNAGKTTLLHMLKND 23 (166)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 579999999999999999984
No 63
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=94.17 E-value=0.011 Score=53.93 Aligned_cols=23 Identities=30% Similarity=0.385 Sum_probs=19.8
Q ss_pred EEEEECCCCCcHHHHHHHHhCCC
Q 002236 660 CFGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
.+.|.||.||||||+-+.|+-.+
T Consensus 4 ~I~l~G~~GsGKSTvak~La~~L 26 (169)
T d1kaga_ 4 NIFLVGPMGAGKSTIGRQLAQQL 26 (169)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHT
T ss_pred eEEEECCCCCCHHHHHHHHHHHh
Confidence 46788999999999999998654
No 64
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]}
Probab=94.15 E-value=0.0074 Score=57.65 Aligned_cols=21 Identities=29% Similarity=0.564 Sum_probs=19.6
Q ss_pred EEEECCCCCcHHHHHHHHhCC
Q 002236 661 FGMLGPNGAGKTTFISMMIGI 681 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl 681 (949)
+||+|+.|+|||||++.|+|-
T Consensus 4 VaiiG~~nvGKSSLin~L~~~ 24 (185)
T d1lnza2 4 VGLVGFPSVGKSTLLSVVSSA 24 (185)
T ss_dssp EEEESSTTSSHHHHHHHSEEE
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 799999999999999999874
No 65
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=94.13 E-value=0.01 Score=56.31 Aligned_cols=24 Identities=29% Similarity=0.433 Sum_probs=21.1
Q ss_pred EEEEECCCCCcHHHHHHHHhCCCC
Q 002236 660 CFGMLGPNGAGKTTFISMMIGITR 683 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~Gl~~ 683 (949)
++||-|+.||||||+.+.|.-.+.
T Consensus 24 iIgI~G~~GSGKSTla~~L~~~l~ 47 (198)
T d1rz3a_ 24 VLGIDGLSRSGKTTLANQLSQTLR 47 (198)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHhc
Confidence 789999999999999999986543
No 66
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=94.09 E-value=0.0087 Score=56.09 Aligned_cols=24 Identities=33% Similarity=0.405 Sum_probs=20.2
Q ss_pred EEEEECCCCCcHHHHHHHHhCCCC
Q 002236 660 CFGMLGPNGAGKTTFISMMIGITR 683 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~Gl~~ 683 (949)
-++|+|+.|||||||++.|+|-..
T Consensus 15 kI~lvG~~~vGKTsLl~~l~~~~~ 38 (186)
T d1f6ba_ 15 KLVFLGLDNAGKTTLLHMLKDDRL 38 (186)
T ss_dssp EEEEEEETTSSHHHHHHHHSCC--
T ss_pred EEEEECCCCCCHHHHHHHHhCCCC
Confidence 477999999999999999988643
No 67
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=93.97 E-value=0.013 Score=54.06 Aligned_cols=32 Identities=28% Similarity=0.558 Sum_probs=24.8
Q ss_pred cEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEcC
Q 002236 659 ECFGMLGPNGAGKTTFISMMIGITRTTSGTAYVQG 693 (949)
Q Consensus 659 ei~gLLG~NGAGKTTLlk~L~Gl~~ptsG~I~i~G 693 (949)
.++.|.||.||||||+.+.|+..+. +.++++|
T Consensus 3 klI~i~G~~GsGKTTva~~L~~~~~---~~~~~~~ 34 (176)
T d2bdta1 3 KLYIITGPAGVGKSTTCKRLAAQLD---NSAYIEG 34 (176)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHSS---SEEEEEH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHcC---CCEEEeh
Confidence 3688999999999999999987653 3444444
No 68
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]}
Probab=93.79 E-value=0.01 Score=56.44 Aligned_cols=22 Identities=27% Similarity=0.551 Sum_probs=20.4
Q ss_pred EEEECCCCCcHHHHHHHHhCCC
Q 002236 661 FGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
+||+|..|+|||||++.|+|..
T Consensus 4 VaivG~~nvGKSTLin~L~~~~ 25 (180)
T d1udxa2 4 VGLVGYPNAGKSSLLAAMTRAH 25 (180)
T ss_dssp EEEECCGGGCHHHHHHHHCSSC
T ss_pred EEEECCCCCCHHHHHHHHhCCC
Confidence 7999999999999999999853
No 69
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=93.75 E-value=0.015 Score=55.16 Aligned_cols=23 Identities=22% Similarity=0.615 Sum_probs=21.2
Q ss_pred EEEEECCCCCcHHHHHHHHhCCC
Q 002236 660 CFGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
+++|+|+.|+|||||++.|+|-.
T Consensus 7 ~I~lvG~~~~GKSSLin~l~~~~ 29 (178)
T d1wf3a1 7 FVAIVGKPNVGKSTLLNNLLGVK 29 (178)
T ss_dssp EEEEECSTTSSHHHHHHHHHTSC
T ss_pred EEEEECCCCCCHHHHHHHHhCCC
Confidence 69999999999999999999853
No 70
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.70 E-value=0.01 Score=56.53 Aligned_cols=26 Identities=31% Similarity=0.296 Sum_probs=22.7
Q ss_pred CCcEEEEECCCCCcHHHHHHHHhCCC
Q 002236 657 SGECFGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 657 ~Gei~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
+|-++.|.|+.||||||+-+.|+-.+
T Consensus 18 ~g~vI~L~G~pGSGKTTiAk~La~~l 43 (195)
T d1x6va3 18 RGCTVWLTGLSGAGKTTVSMALEEYL 43 (195)
T ss_dssp CCEEEEEESSCHHHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHH
Confidence 57799999999999999999997543
No 71
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=93.63 E-value=0.015 Score=53.91 Aligned_cols=20 Identities=30% Similarity=0.391 Sum_probs=17.9
Q ss_pred EEEECCCCCcHHHHHHHHhC
Q 002236 661 FGMLGPNGAGKTTFISMMIG 680 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~G 680 (949)
+.|.|+.||||||+.+.|+-
T Consensus 7 I~i~G~pGsGKTTia~~La~ 26 (173)
T d1rkba_ 7 ILLTGTPGVGKTTLGKELAS 26 (173)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
Confidence 56899999999999999974
No 72
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.53 E-value=0.016 Score=55.95 Aligned_cols=22 Identities=27% Similarity=0.567 Sum_probs=19.3
Q ss_pred EEEECCCCCcHHHHHHHHhCCC
Q 002236 661 FGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
+.|+||+|||||||++.|.-..
T Consensus 4 Ivl~GpsG~GK~tl~~~L~~~~ 25 (186)
T d1gkya_ 4 IVISGPSGTGKSTLLKKLFAEY 25 (186)
T ss_dssp EEEECCTTSSHHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHHhC
Confidence 5799999999999999987654
No 73
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=93.44 E-value=0.076 Score=52.91 Aligned_cols=42 Identities=24% Similarity=0.232 Sum_probs=33.3
Q ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEcCCHHH
Q 002236 784 PKVVYMDEPSTGLDPASRNNLWNVVKRAKQGRAIILTTHSMEE 826 (949)
Q Consensus 784 P~vllLDEPTsGLDp~sr~~l~~~L~~~~~g~tIIltTH~mee 826 (949)
.+|+|+||.= .|++.+...+...+.+...+..+|++|++.+-
T Consensus 116 ~kviiIde~d-~l~~~~q~~Llk~lE~~~~~~~~il~tn~~~~ 157 (239)
T d1njfa_ 116 FKVYLIDEVH-MLSRHSFNALLKTLEEPPEHVKFLLATTDPQK 157 (239)
T ss_dssp SEEEEEETGG-GSCHHHHHHHHHHHHSCCTTEEEEEEESCGGG
T ss_pred CEEEEEECcc-cCCHHHHHHHHHHHhcCCCCeEEEEEcCCccc
Confidence 5799999995 48888888888777765567788999988753
No 74
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.24 E-value=0.018 Score=55.53 Aligned_cols=22 Identities=23% Similarity=0.523 Sum_probs=20.4
Q ss_pred EEEEECCCCCcHHHHHHHHhCC
Q 002236 660 CFGMLGPNGAGKTTFISMMIGI 681 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~Gl 681 (949)
.++|+|+.|||||||++.|+|-
T Consensus 5 ~V~lvG~~n~GKTSLln~l~~~ 26 (209)
T d1nrjb_ 5 SIIIAGPQNSGKTSLLTLLTTD 26 (209)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 6899999999999999999875
No 75
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=93.22 E-value=0.046 Score=55.88 Aligned_cols=24 Identities=25% Similarity=0.382 Sum_probs=21.3
Q ss_pred cEEEEECCCCCcHHHHHHHHhCCC
Q 002236 659 ECFGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 659 ei~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
.-+-|.||.|+|||++.+.+++.+
T Consensus 42 ~giLL~Gp~GtGKT~l~~ala~~~ 65 (265)
T d1r7ra3 42 KGVLFYGPPGCGKTLLAKAIANEC 65 (265)
T ss_dssp CEEEEBCCTTSSHHHHHHHHHHHT
T ss_pred CeEEEECCCCCcchhHHHHHHHHh
Confidence 347799999999999999999876
No 76
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]}
Probab=93.14 E-value=0.026 Score=52.51 Aligned_cols=22 Identities=41% Similarity=0.534 Sum_probs=20.0
Q ss_pred EEEECCCCCcHHHHHHHHhCCC
Q 002236 661 FGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
++++|+.|+|||||++.|.|-.
T Consensus 5 i~ivG~~~~GKTsLi~~l~~~~ 26 (165)
T d1ksha_ 5 LLMLGLDNAGKTTILKKFNGED 26 (165)
T ss_dssp EEEECSTTSSHHHHHHHHTTCC
T ss_pred EEEECCCCCCHHHHHHHHcCCC
Confidence 6799999999999999999854
No 77
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=93.06 E-value=0.021 Score=55.40 Aligned_cols=21 Identities=33% Similarity=0.619 Sum_probs=18.5
Q ss_pred EEEECCCCCcHHHHHHHHhCC
Q 002236 661 FGMLGPNGAGKTTFISMMIGI 681 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl 681 (949)
+.|+||+||||||+.+.|.-.
T Consensus 3 Ivl~GPsGsGK~tl~~~L~~~ 23 (190)
T d1lvga_ 3 VVLSGPSGAGKSTLLKKLFQE 23 (190)
T ss_dssp EEEECCTTSSHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHh
Confidence 569999999999999998654
No 78
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.92 E-value=0.026 Score=54.35 Aligned_cols=23 Identities=22% Similarity=0.473 Sum_probs=20.1
Q ss_pred cEEEEECCCCCcHHHHHHHHhCC
Q 002236 659 ECFGMLGPNGAGKTTFISMMIGI 681 (949)
Q Consensus 659 ei~gLLG~NGAGKTTLlk~L~Gl 681 (949)
..+.|+||+|+|||||++-|...
T Consensus 4 k~ivl~Gpsg~GK~tl~~~L~~~ 26 (178)
T d1kgda_ 4 KTLVLLGAHGVGRRHIKNTLITK 26 (178)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHH
T ss_pred CcEEEECCCCCCHHHHHHHHHHh
Confidence 47899999999999999988743
No 79
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.87 E-value=0.024 Score=55.34 Aligned_cols=23 Identities=17% Similarity=0.440 Sum_probs=20.6
Q ss_pred EEEEECCCCCcHHHHHHHHhCCC
Q 002236 660 CFGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
++||-|+.||||||+-+.|.-.+
T Consensus 4 iIgI~G~~gSGKSTla~~L~~~l 26 (213)
T d1uj2a_ 4 LIGVSGGTASGKSSVCAKIVQLL 26 (213)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHh
Confidence 68999999999999999997654
No 80
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]}
Probab=92.86 E-value=0.021 Score=52.12 Aligned_cols=22 Identities=32% Similarity=0.291 Sum_probs=19.3
Q ss_pred EEEECCCCCcHHHHHHHHhCCC
Q 002236 661 FGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
+.|+|+.|+|||||++.+++-.
T Consensus 3 ivlvG~~~vGKSsLi~~l~~~~ 24 (160)
T d1r8sa_ 3 ILMVGLDAAGKTTILYKLKLGE 24 (160)
T ss_dssp EEEECSTTSSHHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHhcCC
Confidence 5799999999999999997643
No 81
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=92.85 E-value=0.02 Score=55.22 Aligned_cols=28 Identities=21% Similarity=0.262 Sum_probs=24.3
Q ss_pred EeCCcEEEEECCCCCcHHHHHHHHhCCC
Q 002236 655 LPSGECFGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 655 v~~Gei~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
++++.++.|+||.||||||..+.|+--+
T Consensus 5 ~~~~~iI~l~G~pGSGKsT~a~~La~~~ 32 (194)
T d3adka_ 5 LKKSKIIFVVGGPGSGKGTQCEKIVQKY 32 (194)
T ss_dssp HHTSCEEEEEECTTSSHHHHHHHHHHHT
T ss_pred ccCCcEEEEECCCCCCHHHHHHHHHHHh
Confidence 4567899999999999999999997643
No 82
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=92.81 E-value=0.021 Score=56.95 Aligned_cols=106 Identities=19% Similarity=0.138 Sum_probs=57.0
Q ss_pred eCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEcCeecCccHHHhhccEEEEcCCCCCCCCCCHHHHHHHHhhhcCC
Q 002236 656 PSGECFGMLGPNGAGKTTFISMMIGITRTTSGTAYVQGLDIRTDMDRIYTSMGVCPQEDLLWETLTGREHLLFYGRLKNL 735 (949)
Q Consensus 656 ~~Gei~gLLG~NGAGKTTLlk~L~Gl~~ptsG~I~i~G~di~~~~~~~r~~iG~~pQ~~~L~~~lTv~E~L~~~~~l~g~ 735 (949)
++-.+++++||+|+||||++-=|+-.+. +-.++++++-=+.. ..-..|.|.-
T Consensus 9 ~~p~vi~lvGptGvGKTTTiAKLAa~~~------------------~~~~kV~lit~Dt~---R~gA~eQL~~------- 60 (213)
T d1vmaa2 9 EPPFVIMVVGVNGTGKTTSCGKLAKMFV------------------DEGKSVVLAAADTF---RAAAIEQLKI------- 60 (213)
T ss_dssp SSCEEEEEECCTTSSHHHHHHHHHHHHH------------------HTTCCEEEEEECTT---CHHHHHHHHH-------
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHH------------------HCCCceEEEeeccc---ccchhHHHHH-------
Confidence 3456899999999999999865654321 11234555544321 1113334444
Q ss_pred CchhHHHHHHHHHHHcCCCCCCcccccCCCCChhHHHHHHHHHHHcCCCcEEEEeCCCCCCCHHHHHHHHH
Q 002236 736 KGPALTQAVEESLKSVNLFHGGVADKQAGKYSGGMKRRLSVAISLIGNPKVVYMDEPSTGLDPASRNNLWN 806 (949)
Q Consensus 736 ~~~~~~~~v~~~L~~l~L~~~~~~~~~~~~LSGGqKqRLslA~ALi~~P~vllLDEPTsGLDp~sr~~l~~ 806 (949)
+.+.+++.- +......++. .-.+...+.+...+-+++|.| |+|..+.....+-+
T Consensus 61 -----------~a~~l~i~~--~~~~~~~d~~--~~~~~~~~~~~~~~~d~ilID--TaGr~~~d~~~~~e 114 (213)
T d1vmaa2 61 -----------WGERVGATV--ISHSEGADPA--AVAFDAVAHALARNKDVVIID--TAGRLHTKKNLMEE 114 (213)
T ss_dssp -----------HHHHHTCEE--ECCSTTCCHH--HHHHHHHHHHHHTTCSEEEEE--ECCCCSCHHHHHHH
T ss_pred -----------HhhhcCccc--cccCCCCcHH--HHHHHHHHHHHHcCCCEEEEe--ccccccchHHHHHH
Confidence 444444420 1111111111 122344456677789999999 67776666555443
No 83
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=92.78 E-value=0.024 Score=53.19 Aligned_cols=24 Identities=25% Similarity=0.235 Sum_probs=20.8
Q ss_pred EEEEECCCCCcHHHHHHHHhCCCC
Q 002236 660 CFGMLGPNGAGKTTFISMMIGITR 683 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~Gl~~ 683 (949)
++.|.|+.||||||+.+.|+..+.
T Consensus 3 iivi~G~~GsGKTT~~~~La~~L~ 26 (194)
T d1nksa_ 3 IGIVTGIPGVGKSTVLAKVKEILD 26 (194)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHH
Confidence 677899999999999999986553
No 84
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]}
Probab=92.77 E-value=0.022 Score=52.29 Aligned_cols=22 Identities=36% Similarity=0.404 Sum_probs=19.7
Q ss_pred EEEECCCCCcHHHHHHHHhCCC
Q 002236 661 FGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
++|+|..|+|||||++-+++-.
T Consensus 8 I~ivG~~~vGKSSLi~~~~~~~ 29 (169)
T d1upta_ 8 ILILGLDGAGKTTILYRLQVGE 29 (169)
T ss_dssp EEEECSTTSSHHHHHHHHHHSS
T ss_pred EEEECCCCCCHHHHHHHHhCCC
Confidence 7899999999999999988743
No 85
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=92.77 E-value=0.072 Score=52.24 Aligned_cols=42 Identities=24% Similarity=0.309 Sum_probs=30.4
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEcCCHH
Q 002236 783 NPKVVYMDEPSTGLDPASRNNLWNVVKRAKQGRAIILTTHSME 825 (949)
Q Consensus 783 ~P~vllLDEPTsGLDp~sr~~l~~~L~~~~~g~tIIltTH~me 825 (949)
+.+|+++||. -.|.+.+...+.+.|.+-.++.-+|++|++.+
T Consensus 108 ~~kviIide~-d~l~~~a~n~Llk~lEep~~~~~fIl~t~~~~ 149 (207)
T d1a5ta2 108 GAKVVWVTDA-ALLTDAAANALLKTLEEPPAETWFFLATREPE 149 (207)
T ss_dssp SCEEEEESCG-GGBCHHHHHHHHHHHTSCCTTEEEEEEESCGG
T ss_pred ccceEEechh-hhhhhhhhHHHHHHHHhhcccceeeeeecChh
Confidence 4789999986 34556677777766665555667788998875
No 86
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=92.69 E-value=0.027 Score=54.07 Aligned_cols=25 Identities=24% Similarity=0.254 Sum_probs=21.6
Q ss_pred CCcEEEEECCCCCcHHHHHHHHhCC
Q 002236 657 SGECFGMLGPNGAGKTTFISMMIGI 681 (949)
Q Consensus 657 ~Gei~gLLG~NGAGKTTLlk~L~Gl 681 (949)
+..++.|+||.||||||+.+.|+--
T Consensus 5 kp~iI~i~G~pGSGKsT~a~~La~~ 29 (194)
T d1qf9a_ 5 KPNVVFVLGGPGSGKGTQCANIVRD 29 (194)
T ss_dssp CCEEEEEEESTTSSHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHH
Confidence 3458999999999999999999853
No 87
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.63 E-value=0.035 Score=52.39 Aligned_cols=27 Identities=22% Similarity=0.322 Sum_probs=24.2
Q ss_pred EEeCCcEEEEECCCCCcHHHHHHHHhC
Q 002236 654 ALPSGECFGMLGPNGAGKTTFISMMIG 680 (949)
Q Consensus 654 ~v~~Gei~gLLG~NGAGKTTLlk~L~G 680 (949)
.+++|+++-|.||.|+||||+.--++.
T Consensus 19 Gi~~G~v~~i~G~~GsGKT~l~l~la~ 45 (242)
T d1n0wa_ 19 GIETGSITEMFGEFRTGKTQICHTLAV 45 (242)
T ss_dssp SEETTSEEEEECCTTSSHHHHHHHHHH
T ss_pred CCcCCEEEEEEeCCCCCHHHHHHHHHH
Confidence 478999999999999999999877764
No 88
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Probab=92.59 E-value=0.028 Score=51.85 Aligned_cols=23 Identities=22% Similarity=0.390 Sum_probs=20.7
Q ss_pred EEEEECCCCCcHHHHHHHHhCCC
Q 002236 660 CFGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
-++++|+.|+|||||++.|+|.-
T Consensus 3 kI~lvG~~nvGKSsLin~l~~~~ 25 (161)
T d2gj8a1 3 KVVIAGRPNAGKSSLLNALAGRE 25 (161)
T ss_dssp EEEEEESTTSSHHHHHHHHHTSC
T ss_pred EEEEECCCCCCHHHHHHHHhCCC
Confidence 47899999999999999999863
No 89
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=92.47 E-value=0.028 Score=52.75 Aligned_cols=22 Identities=23% Similarity=0.309 Sum_probs=19.5
Q ss_pred EEEECCCCCcHHHHHHHHhCCC
Q 002236 661 FGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
+.|+|+.||||||+-++|+-.+
T Consensus 3 I~liG~~GsGKsTi~k~La~~l 24 (161)
T d1viaa_ 3 IVFIGFMGSGKSTLARALAKDL 24 (161)
T ss_dssp EEEECCTTSCHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHh
Confidence 5788999999999999998755
No 90
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=92.34 E-value=0.033 Score=53.57 Aligned_cols=26 Identities=27% Similarity=0.220 Sum_probs=22.6
Q ss_pred CCcEEEEECCCCCcHHHHHHHHhCCC
Q 002236 657 SGECFGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 657 ~Gei~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
+-.++.|+||.||||||+.+.|+--+
T Consensus 7 ~~~iI~i~GppGSGKsT~a~~La~~~ 32 (196)
T d1ukza_ 7 QVSVIFVLGGPGAGKGTQCEKLVKDY 32 (196)
T ss_dssp TCEEEEEECSTTSSHHHHHHHHHHHS
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHh
Confidence 34579999999999999999998755
No 91
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli [TaxId: 562]}
Probab=92.31 E-value=0.017 Score=54.18 Aligned_cols=23 Identities=17% Similarity=0.317 Sum_probs=20.4
Q ss_pred EEEEECCCCCcHHHHHHHHhCCC
Q 002236 660 CFGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
-++|+|+.++|||||+|.|+|.-
T Consensus 18 ~I~lvG~~NvGKSSL~n~L~~~~ 40 (188)
T d1puia_ 18 EVAFAGRSNAGKSSALNTLTNQK 40 (188)
T ss_dssp EEEEEECTTSSHHHHHTTTCCC-
T ss_pred EEEEECCCCCCHHHHHHHHhCCC
Confidence 38999999999999999999854
No 92
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal domain {Methanococcus maripaludis [TaxId: 39152]}
Probab=92.11 E-value=0.031 Score=53.29 Aligned_cols=22 Identities=32% Similarity=0.573 Sum_probs=20.2
Q ss_pred EEEECCCCCcHHHHHHHHhCCC
Q 002236 661 FGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
+||+|+-+||||||++.|+|.-
T Consensus 8 IaiiG~~naGKSTL~n~L~~~~ 29 (179)
T d1wb1a4 8 LGIFGHIDHGKTTLSKVLTEIA 29 (179)
T ss_dssp EEEEECTTSSHHHHHHHHHTTC
T ss_pred EEEEeCCCCcHHHHHHHHHHhc
Confidence 8999999999999999999743
No 93
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=91.90 E-value=0.034 Score=52.44 Aligned_cols=21 Identities=29% Similarity=0.319 Sum_probs=18.3
Q ss_pred EEEECCCCCcHHHHHHHHhCC
Q 002236 661 FGMLGPNGAGKTTFISMMIGI 681 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl 681 (949)
+.|+|+.||||||+-+.|+-.
T Consensus 5 Iil~G~~GsGKSTia~~LA~~ 25 (170)
T d1e6ca_ 5 IFMVGARGCGMTTVGRELARA 25 (170)
T ss_dssp EEEESCTTSSHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHH
Confidence 458999999999999999743
No 94
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=91.74 E-value=0.033 Score=53.90 Aligned_cols=22 Identities=18% Similarity=0.223 Sum_probs=19.7
Q ss_pred EEEEECCCCCcHHHHHHHHhCC
Q 002236 660 CFGMLGPNGAGKTTFISMMIGI 681 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~Gl 681 (949)
-++|+|+.|+|||||++.|++-
T Consensus 2 ~V~ivG~~~~GKTsLl~~l~~~ 23 (207)
T d2fh5b1 2 AVLFVGLCDSGKTLLFVRLLTG 23 (207)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHcC
Confidence 4789999999999999999873
No 95
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=91.64 E-value=0.043 Score=52.58 Aligned_cols=23 Identities=22% Similarity=0.192 Sum_probs=20.5
Q ss_pred EEEEECCCCCcHHHHHHHHhCCC
Q 002236 660 CFGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
++.++|..|+||||+.+.|+..+
T Consensus 4 li~l~GlpgsGKSTla~~L~~~l 26 (213)
T d1bifa1 4 LIVMVGLPARGKTYISKKLTRYL 26 (213)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
Confidence 68899999999999999998644
No 96
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=91.61 E-value=0.035 Score=55.43 Aligned_cols=33 Identities=24% Similarity=0.358 Sum_probs=25.8
Q ss_pred cEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEcC
Q 002236 659 ECFGMLGPNGAGKTTFISMMIGITRTTSGTAYVQG 693 (949)
Q Consensus 659 ei~gLLG~NGAGKTTLlk~L~Gl~~ptsG~I~i~G 693 (949)
..+.|.||.|+||||+.+.|++.+.. +-+.+++
T Consensus 33 ~~ilL~GpPGtGKT~la~~la~~~~~--~~~~i~~ 65 (273)
T d1gvnb_ 33 TAFLLGGQPGSGKTSLRSAIFEETQG--NVIVIDN 65 (273)
T ss_dssp EEEEEECCTTSCTHHHHHHHHHHTTT--CCEEECT
T ss_pred EEEEEECCCCCCHHHHHHHHHHHhhc--ceEEEec
Confidence 35789999999999999999997742 3455554
No 97
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=91.58 E-value=0.034 Score=58.75 Aligned_cols=41 Identities=20% Similarity=0.325 Sum_probs=32.4
Q ss_pred EEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEc
Q 002236 652 SLALPSGECFGMLGPNGAGKTTFISMMIGITRTTSGTAYVQ 692 (949)
Q Consensus 652 Sl~v~~Gei~gLLG~NGAGKTTLlk~L~Gl~~ptsG~I~i~ 692 (949)
...++.|.-+.+.|+-||||||+++.|.+.++|+.=-|.|.
T Consensus 160 ~~~v~~~~nili~G~tgSGKTT~l~al~~~i~~~~rivtiE 200 (323)
T d1g6oa_ 160 KDGIAIGKNVIVCGGTGSGKTTYIKSIMEFIPKEERIISIE 200 (323)
T ss_dssp HHHHHHTCCEEEEESTTSSHHHHHHHHGGGSCTTCCEEEEE
T ss_pred HHHHHhCCCEEEEeeccccchHHHHHHhhhcccccceeecc
Confidence 34455566689999999999999999999998866555553
No 98
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
Probab=91.52 E-value=0.04 Score=52.66 Aligned_cols=21 Identities=29% Similarity=0.574 Sum_probs=19.3
Q ss_pred EEEEECCCCCcHHHHHHHHhC
Q 002236 660 CFGMLGPNGAGKTTFISMMIG 680 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~G 680 (949)
++||.|+.||||||+.++|.-
T Consensus 5 IIgitG~~gSGKstva~~l~~ 25 (191)
T d1uf9a_ 5 IIGITGNIGSGKSTVAALLRS 25 (191)
T ss_dssp EEEEEECTTSCHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHH
Confidence 789999999999999999863
No 99
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima [TaxId: 2336]}
Probab=91.43 E-value=0.014 Score=54.07 Aligned_cols=21 Identities=19% Similarity=0.466 Sum_probs=19.7
Q ss_pred EEEECCCCCcHHHHHHHHhCC
Q 002236 661 FGMLGPNGAGKTTFISMMIGI 681 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl 681 (949)
++|+|+.|+|||||++.|+|-
T Consensus 3 I~liG~~n~GKSSLin~l~g~ 23 (160)
T d1xzpa2 3 MVIVGKPNVGKSTLLNRLLNE 23 (160)
T ss_dssp EEEECCHHHHTCHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 689999999999999999984
No 100
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.40 E-value=0.047 Score=52.16 Aligned_cols=22 Identities=32% Similarity=0.353 Sum_probs=19.7
Q ss_pred EEEEECCCCCcHHHHHHHHhCC
Q 002236 660 CFGMLGPNGAGKTTFISMMIGI 681 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~Gl 681 (949)
++.|+||.||||||..+.|+--
T Consensus 3 iI~i~GppGSGKsT~a~~La~~ 24 (194)
T d1teva_ 3 VVFVLGGPGAGKGTQCARIVEK 24 (194)
T ss_dssp EEEEECCTTSSHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHH
Confidence 6789999999999999999753
No 101
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]}
Probab=91.32 E-value=0.77 Score=46.49 Aligned_cols=22 Identities=23% Similarity=0.324 Sum_probs=19.5
Q ss_pred CcEEEEECCCCCcHHHHHHHHh
Q 002236 658 GECFGMLGPNGAGKTTFISMMI 679 (949)
Q Consensus 658 Gei~gLLG~NGAGKTTLlk~L~ 679 (949)
..+++|.|.-|.|||||.+.+.
T Consensus 44 ~~~v~I~GmgGiGKTtLA~~v~ 65 (277)
T d2a5yb3 44 SFFLFLHGRAGSGKSVIASQAL 65 (277)
T ss_dssp SEEEEEECSTTSSHHHHHHHHH
T ss_pred ceEEEEECCCCCCHHHHHHHHH
Confidence 3589999999999999998875
No 102
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]}
Probab=91.32 E-value=0.042 Score=51.23 Aligned_cols=23 Identities=26% Similarity=0.226 Sum_probs=20.2
Q ss_pred EEEEECCCCCcHHHHHHHHhCCC
Q 002236 660 CFGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
-+.++|..|||||||++-|.|-.
T Consensus 17 kI~vvG~~~~GKSsLi~rl~~~~ 39 (177)
T d1zj6a1 17 KVIIVGLDNAGKTTILYQFSMNE 39 (177)
T ss_dssp EEEEEESTTSSHHHHHHHHHTTS
T ss_pred EEEEECCCCCCHHHHHHHHhcCC
Confidence 46799999999999999998843
No 103
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=91.28 E-value=0.046 Score=51.20 Aligned_cols=22 Identities=23% Similarity=0.264 Sum_probs=18.8
Q ss_pred EEEECCCCCcHHHHHHHHhCCC
Q 002236 661 FGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
+.|+|+.||||||+-+.|+--+
T Consensus 4 IvliG~~G~GKSTig~~La~~l 25 (165)
T d2iyva1 4 AVLVGLPGSGKSTIGRRLAKAL 25 (165)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHh
Confidence 4578999999999999998654
No 104
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.24 E-value=0.05 Score=53.57 Aligned_cols=27 Identities=22% Similarity=0.260 Sum_probs=23.6
Q ss_pred eCCcEEEEECCCCCcHHHHHHHHhCCC
Q 002236 656 PSGECFGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 656 ~~Gei~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
++|-+++|-|+-||||||+.+.|..-+
T Consensus 1 ~rG~lI~ieG~dGsGKsT~~~~L~~~L 27 (209)
T d1nn5a_ 1 RRGALIVLEGVDRAGKSTQSRKLVEAL 27 (209)
T ss_dssp CCCCEEEEEESTTSSHHHHHHHHHHHH
T ss_pred CCeeEEEEECCCCCCHHHHHHHHHHHH
Confidence 478899999999999999999987644
No 105
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=91.13 E-value=0.035 Score=53.11 Aligned_cols=25 Identities=40% Similarity=0.553 Sum_probs=21.6
Q ss_pred eCCcEEEEECCCCCcHHHHHHHHhC
Q 002236 656 PSGECFGMLGPNGAGKTTFISMMIG 680 (949)
Q Consensus 656 ~~Gei~gLLG~NGAGKTTLlk~L~G 680 (949)
++|=-+.|+||.||||||..+.|+-
T Consensus 1 p~~~riil~G~pGSGKsT~a~~La~ 25 (190)
T d1ak2a1 1 PKGVRAVLLGPPGAGKGTQAPKLAK 25 (190)
T ss_dssp CCCCEEEEECCTTSSHHHHHHHHHH
T ss_pred CCccEEEEECCCCCCHHHHHHHHHH
Confidence 3566778999999999999999983
No 106
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.13 E-value=0.08 Score=49.35 Aligned_cols=28 Identities=18% Similarity=0.334 Sum_probs=21.7
Q ss_pred EEEECCCCCcHHHHHHHHhCC-----CCCCcce
Q 002236 661 FGMLGPNGAGKTTFISMMIGI-----TRTTSGT 688 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl-----~~ptsG~ 688 (949)
++++|..|+|||||++-+++- +.||-|.
T Consensus 5 i~viG~~~vGKTsLi~r~~~~~f~~~~~~T~~~ 37 (171)
T d2erxa1 5 VAVFGAGGVGKSSLVLRFVKGTFRESYIPTVED 37 (171)
T ss_dssp EEEECCTTSSHHHHHHHHHTCCCCSSCCCCSCE
T ss_pred EEEECCCCCCHHHHHHHHHhCCCCCccCcceee
Confidence 679999999999999877652 3455553
No 107
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=91.01 E-value=0.045 Score=55.67 Aligned_cols=22 Identities=27% Similarity=0.569 Sum_probs=20.4
Q ss_pred EEEECCCCCcHHHHHHHHhCCC
Q 002236 661 FGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
++|+|..|+|||||+|.|.|-.
T Consensus 35 I~LvG~tg~GKSSliN~ilg~~ 56 (257)
T d1h65a_ 35 ILVMGKGGVGKSSTVNSIIGER 56 (257)
T ss_dssp EEEEESTTSSHHHHHHHHHTSC
T ss_pred EEEECCCCCcHHHHHHHHhCCC
Confidence 7899999999999999999964
No 108
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]}
Probab=91.00 E-value=0.045 Score=50.95 Aligned_cols=20 Identities=30% Similarity=0.619 Sum_probs=17.8
Q ss_pred EEEECCCCCcHHHHHHHHhC
Q 002236 661 FGMLGPNGAGKTTFISMMIG 680 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~G 680 (949)
++++|+.|+|||||++.+.+
T Consensus 5 i~i~G~~~~GKTsLl~~l~~ 24 (164)
T d1zd9a1 5 LTLVGLQYSGKTTFVNVIAS 24 (164)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHc
Confidence 57899999999999997765
No 109
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal (G) domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=90.98 E-value=0.047 Score=54.26 Aligned_cols=22 Identities=32% Similarity=0.475 Sum_probs=20.4
Q ss_pred EEEEECCCCCcHHHHHHHHhCC
Q 002236 660 CFGMLGPNGAGKTTFISMMIGI 681 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~Gl 681 (949)
++||+|+-+||||||++.|+|-
T Consensus 7 ~IaIiGh~d~GKSTL~~~L~~~ 28 (227)
T d1g7sa4 7 IVSVLGHVDHGKTTLLDHIRGS 28 (227)
T ss_dssp EEEEECSTTSSHHHHHHHHHHH
T ss_pred EEEEEeCCCccHHHHHHHHHhh
Confidence 6999999999999999999874
No 110
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=90.73 E-value=0.05 Score=51.97 Aligned_cols=21 Identities=19% Similarity=0.186 Sum_probs=18.4
Q ss_pred EEEEECCCCCcHHHHHHHHhC
Q 002236 660 CFGMLGPNGAGKTTFISMMIG 680 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~G 680 (949)
.+.|.||.||||||+.+.|+-
T Consensus 5 ~I~i~GppGsGKsT~a~~La~ 25 (189)
T d1zaka1 5 KVMISGAPASGKGTQCELIKT 25 (189)
T ss_dssp CEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHH
Confidence 366999999999999999964
No 111
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=90.65 E-value=0.034 Score=58.94 Aligned_cols=26 Identities=31% Similarity=0.429 Sum_probs=22.4
Q ss_pred CcEEEEECCCCCcHHHHHHHHhCCCC
Q 002236 658 GECFGMLGPNGAGKTTFISMMIGITR 683 (949)
Q Consensus 658 Gei~gLLG~NGAGKTTLlk~L~Gl~~ 683 (949)
.-++||.|+.|||||||++-|+..+.
T Consensus 54 ~~~IgitG~pGaGKSTLi~~l~~~~~ 79 (327)
T d2p67a1 54 TLRLGVTGTPGAGKSTFLEAFGMLLI 79 (327)
T ss_dssp SEEEEEEECTTSCHHHHHHHHHHHHH
T ss_pred ceEEEeeCCCCCCHHHHHHHHHHHHH
Confidence 45899999999999999999986543
No 112
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.55 E-value=0.082 Score=49.44 Aligned_cols=30 Identities=23% Similarity=0.359 Sum_probs=22.9
Q ss_pred EEEECCCCCcHHHHHHHHhC-----CCCCCcceEE
Q 002236 661 FGMLGPNGAGKTTFISMMIG-----ITRTTSGTAY 690 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~G-----l~~ptsG~I~ 690 (949)
+.|+|..|+|||||++-+++ -+.|+.|...
T Consensus 8 i~lvG~~~vGKTsLi~r~~~~~f~~~~~~t~~~~~ 42 (171)
T d2erya1 8 LVVVGGGGVGKSALTIQFIQSYFVTDYDPTIEDSY 42 (171)
T ss_dssp EEEEECTTSSHHHHHHHHHHSCCCSSCCTTCCEEE
T ss_pred EEEECCCCCCHHHHHHHHHhCCCCcccCcccccce
Confidence 78999999999999987654 2346666543
No 113
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=90.45 E-value=0.048 Score=52.12 Aligned_cols=24 Identities=25% Similarity=0.295 Sum_probs=21.6
Q ss_pred cEEEEECCCCCcHHHHHHHHhCCC
Q 002236 659 ECFGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 659 ei~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
=+++|-|+-||||||+++.|...+
T Consensus 10 ~~I~ieG~~GsGKTTl~~~L~~~l 33 (197)
T d2vp4a1 10 FTVLIEGNIGSGKTTYLNHFEKYK 33 (197)
T ss_dssp EEEEEECSTTSCHHHHHHTTGGGT
T ss_pred eEEEEECCCCCCHHHHHHHHHHHh
Confidence 489999999999999999998755
No 114
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.41 E-value=0.096 Score=48.67 Aligned_cols=21 Identities=19% Similarity=0.395 Sum_probs=18.5
Q ss_pred EEEEECCCCCcHHHHHHHHhC
Q 002236 660 CFGMLGPNGAGKTTFISMMIG 680 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~G 680 (949)
-++|+|+.|+|||||++.+++
T Consensus 6 Kv~liG~~~vGKTsLl~~~~~ 26 (167)
T d1xtqa1 6 KIAILGYRSVGKSSLTIQFVE 26 (167)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 378999999999999998764
No 115
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=90.37 E-value=0.26 Score=50.39 Aligned_cols=42 Identities=24% Similarity=0.544 Sum_probs=31.4
Q ss_pred EEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcc-eEEEcCee
Q 002236 654 ALPSGECFGMLGPNGAGKTTFISMMIGITRTTSG-TAYVQGLD 695 (949)
Q Consensus 654 ~v~~Gei~gLLG~NGAGKTTLlk~L~Gl~~ptsG-~I~i~G~d 695 (949)
.++.|.++-+-||.|+||||+.-.++....-..| -++|+.+.
T Consensus 53 Gip~g~itei~G~~~sGKT~l~l~~~~~aqk~g~~v~yiDtE~ 95 (268)
T d1xp8a1 53 GIPRGRITEIYGPESGGKTTLALAIVAQAQKAGGTCAFIDAEH 95 (268)
T ss_dssp SEETTSEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CccCceEEEEecCCccchHHHHHHHHHHHHhCCCEEEEEECCc
Confidence 5789999999999999999998777665433233 45666553
No 116
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=90.32 E-value=0.063 Score=50.42 Aligned_cols=22 Identities=27% Similarity=0.406 Sum_probs=18.9
Q ss_pred EEEECCCCCcHHHHHHHHhCCC
Q 002236 661 FGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
+.|+||.||||||..+.|+--+
T Consensus 3 I~i~G~pGSGKsT~a~~La~~~ 24 (182)
T d1zina1 3 LVLMGLPGAGKGTQAEKIVAAY 24 (182)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHH
Confidence 5699999999999999996543
No 117
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]}
Probab=90.31 E-value=0.069 Score=51.90 Aligned_cols=26 Identities=27% Similarity=0.349 Sum_probs=23.0
Q ss_pred CCcEEEEECCCCCcHHHHHHHHhCCC
Q 002236 657 SGECFGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 657 ~Gei~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
+|..+++-|+-||||||+++.|.-.+
T Consensus 1 rgkfIviEG~dGsGKsT~~~~L~~~L 26 (210)
T d4tmka_ 1 RSKYIVIEGLEGAGKTTARNVVVETL 26 (210)
T ss_dssp CCCEEEEEECTTSCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHH
Confidence 58899999999999999999988643
No 118
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=90.25 E-value=0.071 Score=52.47 Aligned_cols=41 Identities=17% Similarity=0.158 Sum_probs=29.1
Q ss_pred eCCcEEEEECCCCCcHHHHHHHHhCCCCCC--cceEEEcCeec
Q 002236 656 PSGECFGMLGPNGAGKTTFISMMIGITRTT--SGTAYVQGLDI 696 (949)
Q Consensus 656 ~~Gei~gLLG~NGAGKTTLlk~L~Gl~~pt--sG~I~i~G~di 696 (949)
++|-++-|.|.+||||||+.+.|.-.+... .-.+.++|..+
T Consensus 22 ~kg~vIwltGlsGsGKTTia~~L~~~l~~~~~~~~~~ldgD~i 64 (208)
T d1m7ga_ 22 QRGLTIWLTGLSASGKSTLAVELEHQLVRDRRVHAYRLDGDNI 64 (208)
T ss_dssp SSCEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCEEEECHHHH
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHHHhcCceEEEEcchHH
Confidence 357899999999999999999987433211 12456676544
No 119
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=90.20 E-value=0.07 Score=51.45 Aligned_cols=22 Identities=36% Similarity=0.545 Sum_probs=20.0
Q ss_pred EEEEECCCCCcHHHHHHHHhCC
Q 002236 660 CFGMLGPNGAGKTTFISMMIGI 681 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~Gl 681 (949)
|++|.||.||||||.-+.|+--
T Consensus 5 iI~I~GppGSGKgT~ak~La~~ 26 (225)
T d1ckea_ 5 VITIDGPSGAGKGTLCKAMAEA 26 (225)
T ss_dssp EEEEECCTTSSHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHH
Confidence 8899999999999999999743
No 120
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit) {Cow (Bos taurus) [TaxId: 9913]}
Probab=90.05 E-value=0.061 Score=53.13 Aligned_cols=28 Identities=36% Similarity=0.436 Sum_probs=23.5
Q ss_pred EEEEECCCCCcHHHHHHHH-hCCCCCCcc
Q 002236 660 CFGMLGPNGAGKTTFISMM-IGITRTTSG 687 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L-~Gl~~ptsG 687 (949)
-+.|||..|+|||||++-+ .|-..||-|
T Consensus 8 KilllG~~~vGKTsll~~~~~~~~~pTiG 36 (221)
T d1azta2 8 RLLLLGAGESGKSTIVKQMRILHVVLTSG 36 (221)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHCCCCCS
T ss_pred EEEEECCCCCCHHHHHHHHhcCCcCCCCC
Confidence 4689999999999999876 566778887
No 121
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=90.00 E-value=0.079 Score=49.53 Aligned_cols=21 Identities=29% Similarity=0.501 Sum_probs=18.9
Q ss_pred EEEECCCCCcHHHHHHHHhCC
Q 002236 661 FGMLGPNGAGKTTFISMMIGI 681 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl 681 (949)
++++|+.|+|||||++.+++-
T Consensus 5 i~~vG~~~vGKSsLi~~~~~~ 25 (175)
T d1ky3a_ 5 VIILGDSGVGKTSLMHRYVND 25 (175)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHcC
Confidence 679999999999999998763
No 122
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=89.85 E-value=0.071 Score=52.37 Aligned_cols=43 Identities=16% Similarity=0.303 Sum_probs=28.8
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEcCCHHH
Q 002236 783 NPKVVYMDEPSTGLDPASRNNLWNVVKRAKQGRAIILTTHSMEE 826 (949)
Q Consensus 783 ~P~vllLDEPTsGLDp~sr~~l~~~L~~~~~g~tIIltTH~mee 826 (949)
++.++++||- -.+.......++..+........+|++|+..+.
T Consensus 109 ~~~iilide~-d~~~~~~~~~ll~~l~~~~~~~~~i~~~n~~~~ 151 (231)
T d1iqpa2 109 SFKIIFLDEA-DALTQDAQQALRRTMEMFSSNVRFILSCNYSSK 151 (231)
T ss_dssp SCEEEEEETG-GGSCHHHHHHHHHHHHHTTTTEEEEEEESCGGG
T ss_pred CceEEeehhh-hhcchhHHHHHhhhcccCCcceEEEeccCChhh
Confidence 5679999995 345555666666666665555667777777653
No 123
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]}
Probab=89.81 E-value=0.067 Score=50.01 Aligned_cols=21 Identities=33% Similarity=0.494 Sum_probs=19.2
Q ss_pred EEEECCCCCcHHHHHHHHhCC
Q 002236 661 FGMLGPNGAGKTTFISMMIGI 681 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl 681 (949)
++++|+.|+|||||++.|.+-
T Consensus 19 I~vvG~~~vGKSsLi~~l~~~ 39 (176)
T d1fzqa_ 19 ILLLGLDNAGKTTLLKQLASE 39 (176)
T ss_dssp EEEEESTTSSHHHHHHHHCCS
T ss_pred EEEECCCCCCHHHHHHHHhcC
Confidence 679999999999999999774
No 124
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=89.80 E-value=0.047 Score=57.34 Aligned_cols=24 Identities=17% Similarity=0.306 Sum_probs=21.7
Q ss_pred EEEEECCCCCcHHHHHHHHhCCCC
Q 002236 660 CFGMLGPNGAGKTTFISMMIGITR 683 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~Gl~~ 683 (949)
++||-|+.||||||+-+.|..++.
T Consensus 82 iIGIaG~sgSGKSTla~~L~~lL~ 105 (308)
T d1sq5a_ 82 IISIAGSVAVGKSTTARVLQALLS 105 (308)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHT
T ss_pred EEEEeCCCCCCCcHHHHHHHHHHh
Confidence 889999999999999999987664
No 125
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.76 E-value=0.078 Score=49.33 Aligned_cols=21 Identities=24% Similarity=0.471 Sum_probs=18.8
Q ss_pred EEEECCCCCcHHHHHHHHhCC
Q 002236 661 FGMLGPNGAGKTTFISMMIGI 681 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl 681 (949)
++++|+.|+|||||++.+++-
T Consensus 6 i~viG~~~vGKTsli~~l~~~ 26 (166)
T d1ctqa_ 6 LVVVGAGGVGKSALTIQLIQN 26 (166)
T ss_dssp EEEEESTTSSHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 789999999999999988763
No 126
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=89.76 E-value=0.29 Score=47.61 Aligned_cols=43 Identities=14% Similarity=0.186 Sum_probs=35.0
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEcCCHH
Q 002236 782 GNPKVVYMDEPSTGLDPASRNNLWNVVKRAKQGRAIILTTHSME 825 (949)
Q Consensus 782 ~~P~vllLDEPTsGLDp~sr~~l~~~L~~~~~g~tIIltTH~me 825 (949)
++.+|+++||. -.|...+...+.+.|.+-..+..+|++|++.+
T Consensus 78 ~~~KviIId~a-d~l~~~aqNaLLK~LEEPp~~t~fiLit~~~~ 120 (198)
T d2gnoa2 78 YTRKYVIVHDC-ERMTQQAANAFLKALEEPPEYAVIVLNTRRWH 120 (198)
T ss_dssp SSSEEEEETTG-GGBCHHHHHHTHHHHHSCCTTEEEEEEESCGG
T ss_pred CCCEEEEEeCc-cccchhhhhHHHHHHhCCCCCceeeeccCChh
Confidence 35699999994 56788888888888887667788889999876
No 127
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=89.62 E-value=0.083 Score=50.01 Aligned_cols=22 Identities=27% Similarity=0.351 Sum_probs=19.3
Q ss_pred EEEECCCCCcHHHHHHHHhCCC
Q 002236 661 FGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
+.|+||.||||||+.+.|+--+
T Consensus 3 I~i~G~pGSGKsT~a~~La~~~ 24 (182)
T d1s3ga1 3 IVLMGLPGAGKGTQADRIVEKY 24 (182)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHH
Confidence 5799999999999999998543
No 128
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.58 E-value=0.058 Score=52.94 Aligned_cols=27 Identities=22% Similarity=0.375 Sum_probs=23.8
Q ss_pred CCcEEEEECCCCCcHHHHHHHHhCCCC
Q 002236 657 SGECFGMLGPNGAGKTTFISMMIGITR 683 (949)
Q Consensus 657 ~Gei~gLLG~NGAGKTTLlk~L~Gl~~ 683 (949)
++..++|=|+-||||||+++.|...+.
T Consensus 1 ~~k~I~ieG~dGsGKST~~~~L~~~l~ 27 (241)
T d1p5zb_ 1 RIKKISIEGNIAAGKSTFVNILKQLCE 27 (241)
T ss_dssp CCEEEEEECSTTSSHHHHHTTTGGGCT
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHh
Confidence 467899999999999999999998763
No 129
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=89.57 E-value=0.07 Score=49.90 Aligned_cols=20 Identities=25% Similarity=0.454 Sum_probs=18.2
Q ss_pred EEEECCCCCcHHHHHHHHhC
Q 002236 661 FGMLGPNGAGKTTFISMMIG 680 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~G 680 (949)
++++|..|+|||||++.+.+
T Consensus 8 i~vvG~~~vGKTsLi~~l~~ 27 (169)
T d3raba_ 8 ILIIGNSSVGKTSFLFRYAD 27 (169)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHc
Confidence 78999999999999998764
No 130
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.54 E-value=0.088 Score=49.50 Aligned_cols=20 Identities=25% Similarity=0.551 Sum_probs=18.2
Q ss_pred EEEECCCCCcHHHHHHHHhC
Q 002236 661 FGMLGPNGAGKTTFISMMIG 680 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~G 680 (949)
++++|+.|+|||||++.+.+
T Consensus 7 i~vvG~~~vGKTsLi~~~~~ 26 (175)
T d2f9la1 7 VVLIGDSGVGKSNLLSRFTR 26 (175)
T ss_dssp EEEESSTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 78999999999999998765
No 131
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]}
Probab=89.47 E-value=0.083 Score=51.40 Aligned_cols=21 Identities=33% Similarity=0.585 Sum_probs=19.2
Q ss_pred EEEEECCCCCcHHHHHHHHhC
Q 002236 660 CFGMLGPNGAGKTTFISMMIG 680 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~G 680 (949)
++||.|..||||||..+++.-
T Consensus 4 iIgITG~igSGKStv~~~l~~ 24 (205)
T d1jjva_ 4 IVGLTGGIGSGKTTIANLFTD 24 (205)
T ss_dssp EEEEECSTTSCHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHH
Confidence 789999999999999999953
No 132
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=89.37 E-value=0.081 Score=49.73 Aligned_cols=29 Identities=28% Similarity=0.437 Sum_probs=25.4
Q ss_pred EEEECCCCCcHHHHHHHHhCCCCCCcceE
Q 002236 661 FGMLGPNGAGKTTFISMMIGITRTTSGTA 689 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl~~ptsG~I 689 (949)
+.|||..|+||||+++.+.....|+.|..
T Consensus 5 ivllG~~~vGKTsl~~r~~~~~~~t~~~~ 33 (195)
T d1svsa1 5 LLLLGAGESGKSTIVKQMKIIHEAGTGIV 33 (195)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHSCCCSEE
T ss_pred EEEECCCCCCHHHHHHHHhhCCCCCccEE
Confidence 68999999999999999988778888844
No 133
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=89.33 E-value=0.15 Score=47.50 Aligned_cols=27 Identities=22% Similarity=0.436 Sum_probs=21.0
Q ss_pred EEEECCCCCcHHHHHHHHhCC-----CCCCcc
Q 002236 661 FGMLGPNGAGKTTFISMMIGI-----TRTTSG 687 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl-----~~ptsG 687 (949)
++++|..|+|||||++-+.+- ..|+.|
T Consensus 6 i~vvG~~~vGKTsLi~~~~~~~f~~~~~~t~~ 37 (170)
T d1ek0a_ 6 LVLLGEAAVGKSSIVLRFVSNDFAENKEPTIG 37 (170)
T ss_dssp EEEECSTTSSHHHHHHHHHHSCCCTTCCCCSS
T ss_pred EEEECCCCcCHHHHHHHHHhCCCCcccccccc
Confidence 679999999999999976643 345555
No 134
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=89.32 E-value=0.089 Score=51.74 Aligned_cols=28 Identities=21% Similarity=0.266 Sum_probs=24.8
Q ss_pred CCcEEEEECCCCCcHHHHHHHHhCCCCC
Q 002236 657 SGECFGMLGPNGAGKTTFISMMIGITRT 684 (949)
Q Consensus 657 ~Gei~gLLG~NGAGKTTLlk~L~Gl~~p 684 (949)
+|.++++=|+-||||||+.++|.--+..
T Consensus 2 kGk~I~iEG~DGsGKST~~~~L~~~L~~ 29 (214)
T d1tmka_ 2 RGKLILIEGLDRTGKTTQCNILYKKLQP 29 (214)
T ss_dssp CCCEEEEEESTTSSHHHHHHHHHHHTTT
T ss_pred CeEEEEEECCCCCcHHHHHHHHHHHHHh
Confidence 6899999999999999999999866553
No 135
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=89.31 E-value=0.088 Score=51.06 Aligned_cols=23 Identities=22% Similarity=0.339 Sum_probs=19.9
Q ss_pred EEEEECCCCCcHHHHHHHHhCCC
Q 002236 660 CFGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
+++|-||.||||||.-+.|+--+
T Consensus 5 ~IaIdGp~GsGKgT~ak~La~~l 27 (223)
T d1q3ta_ 5 QIAIDGPASSGKSTVAKIIAKDF 27 (223)
T ss_dssp EEEEECSSCSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHh
Confidence 56788999999999999998543
No 136
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=89.27 E-value=0.098 Score=50.77 Aligned_cols=26 Identities=15% Similarity=0.345 Sum_probs=23.6
Q ss_pred EEeCCcEEEEECCCCCcHHHHHHHHh
Q 002236 654 ALPSGECFGMLGPNGAGKTTFISMMI 679 (949)
Q Consensus 654 ~v~~Gei~gLLG~NGAGKTTLlk~L~ 679 (949)
.+++|+++-|.|+.|+||||+..-++
T Consensus 30 Gi~~G~~~li~G~pGsGKT~l~lq~~ 55 (251)
T d1szpa2 30 GVETGSITELFGEFRTGKSQLCHTLA 55 (251)
T ss_dssp SEESSSEEEEEESTTSSHHHHHHHHT
T ss_pred CCcCCeEEEEEcCCCCCHHHHHHHHH
Confidence 48999999999999999999997665
No 137
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=89.13 E-value=0.097 Score=51.80 Aligned_cols=24 Identities=29% Similarity=0.358 Sum_probs=21.2
Q ss_pred EEEEECCCCCcHHHHHHHHhCCCC
Q 002236 660 CFGMLGPNGAGKTTFISMMIGITR 683 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~Gl~~ 683 (949)
.+.|.||.|+||||+.+.|+..+.
T Consensus 54 ~lll~GPpG~GKTt~a~~la~~~~ 77 (253)
T d1sxja2 54 AAMLYGPPGIGKTTAAHLVAQELG 77 (253)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHTT
T ss_pred eEEEECCCCCCHHHHHHHHHHHHH
Confidence 577999999999999999998653
No 138
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=89.03 E-value=0.094 Score=48.69 Aligned_cols=21 Identities=19% Similarity=0.457 Sum_probs=18.5
Q ss_pred EEEECCCCCcHHHHHHHHhCC
Q 002236 661 FGMLGPNGAGKTTFISMMIGI 681 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl 681 (949)
+.++|..|+|||||++.+++-
T Consensus 5 i~vvG~~~vGKTSli~~l~~~ 25 (166)
T d1g16a_ 5 ILLIGDSGVGKSCLLVRFVED 25 (166)
T ss_dssp EEEEESTTSSHHHHHHHHHHC
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 679999999999999987654
No 139
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=88.80 E-value=0.095 Score=49.38 Aligned_cols=20 Identities=30% Similarity=0.371 Sum_probs=18.0
Q ss_pred EEEECCCCCcHHHHHHHHhC
Q 002236 661 FGMLGPNGAGKTTFISMMIG 680 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~G 680 (949)
+.|+||.||||||..+.|+-
T Consensus 3 I~i~G~pGSGKsT~~~~La~ 22 (179)
T d1e4va1 3 IILLGAPVAGKGTQAQFIME 22 (179)
T ss_dssp EEEEESTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
Confidence 56899999999999999974
No 140
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.78 E-value=0.16 Score=48.03 Aligned_cols=21 Identities=29% Similarity=0.602 Sum_probs=18.2
Q ss_pred EEEEECCCCCcHHHHHHHHhC
Q 002236 660 CFGMLGPNGAGKTTFISMMIG 680 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~G 680 (949)
-++++|..|+|||||++-+.+
T Consensus 7 ki~vlG~~~vGKTsLi~~~~~ 27 (175)
T d2bmja1 7 RLGVLGDARSGKSSLIHRFLT 27 (175)
T ss_dssp EEEEECCTTTTHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 368999999999999996665
No 141
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]}
Probab=88.77 E-value=0.11 Score=49.15 Aligned_cols=28 Identities=29% Similarity=0.198 Sum_probs=24.2
Q ss_pred EeCCcEEEEECCCCCcHHHHHHHHhCCC
Q 002236 655 LPSGECFGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 655 v~~Gei~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
.++|.++.|-|+=||||||+.|.++.-+
T Consensus 30 ~~~g~ii~L~G~LGaGKTtfvr~~~~~l 57 (158)
T d1htwa_ 30 TEKAIMVYLNGDLGAGKTTLTRGMLQGI 57 (158)
T ss_dssp CSSCEEEEEECSTTSSHHHHHHHHHHHT
T ss_pred CCCCeEEEEecCCCccHHHHHHHHHhhc
Confidence 3579999999999999999999887543
No 142
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=88.73 E-value=0.099 Score=49.32 Aligned_cols=21 Identities=38% Similarity=0.466 Sum_probs=18.5
Q ss_pred EEEECCCCCcHHHHHHHHhCC
Q 002236 661 FGMLGPNGAGKTTFISMMIGI 681 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl 681 (949)
+.|+||.||||||.-+.|+--
T Consensus 3 I~i~G~pGsGKsT~a~~La~~ 23 (181)
T d2cdna1 3 VLLLGPPGAGKGTQAVKLAEK 23 (181)
T ss_dssp EEEECCTTSSHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHH
Confidence 578999999999999999743
No 143
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.68 E-value=0.1 Score=49.32 Aligned_cols=21 Identities=38% Similarity=0.507 Sum_probs=18.9
Q ss_pred EEEECCCCCcHHHHHHHHhCC
Q 002236 661 FGMLGPNGAGKTTFISMMIGI 681 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl 681 (949)
++|+|+.|+|||||++.+.+-
T Consensus 8 i~ivG~~~vGKTsLi~~l~~~ 28 (186)
T d2f7sa1 8 LLALGDSGVGKTTFLYRYTDN 28 (186)
T ss_dssp EEEESCTTSSHHHHHHHHHCS
T ss_pred EEEECCCCcCHHHHHHHHhcC
Confidence 679999999999999988764
No 144
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=88.62 E-value=0.11 Score=50.81 Aligned_cols=21 Identities=24% Similarity=0.400 Sum_probs=19.4
Q ss_pred EEEEECCCCCcHHHHHHHHhC
Q 002236 660 CFGMLGPNGAGKTTFISMMIG 680 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~G 680 (949)
++||.|..||||||..+++..
T Consensus 5 iIgitG~igSGKStv~~~l~~ 25 (208)
T d1vhta_ 5 IVALTGGIGSGKSTVANAFAD 25 (208)
T ss_dssp EEEEECCTTSCHHHHHHHHHH
T ss_pred EEEEECCCcCCHHHHHHHHHH
Confidence 789999999999999999864
No 145
>d1kk1a3 c.37.1.8 (A:6-200) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Archaeon Pyrococcus abyssi [TaxId: 29292]}
Probab=88.60 E-value=0.12 Score=49.78 Aligned_cols=22 Identities=36% Similarity=0.611 Sum_probs=20.3
Q ss_pred EEEECCCCCcHHHHHHHHhCCC
Q 002236 661 FGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
+|++|+=+||||||++.|+|..
T Consensus 8 IaiiGhvd~GKSTL~~~L~g~~ 29 (195)
T d1kk1a3 8 IGMVGHVDHGKTTLTKALTGVW 29 (195)
T ss_dssp EEEECSTTSSHHHHHHHHHTCC
T ss_pred EEEEeccCCcHHHHHHHHHhhh
Confidence 6999999999999999999854
No 146
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Probab=88.55 E-value=0.068 Score=50.49 Aligned_cols=21 Identities=38% Similarity=0.406 Sum_probs=18.5
Q ss_pred EEEECCCCCcHHHHHHHHhCC
Q 002236 661 FGMLGPNGAGKTTFISMMIGI 681 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl 681 (949)
+.++|+.|+|||||++.+.+-
T Consensus 20 I~lvG~~~vGKTsLi~~l~~~ 40 (182)
T d1moza_ 20 ILILGLDGAGKTTILYRLQIG 40 (182)
T ss_dssp EEEEEETTSSHHHHHHHTCCS
T ss_pred EEEECCCCCCHHHHHHHHhcC
Confidence 669999999999999998653
No 147
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=88.46 E-value=0.12 Score=47.87 Aligned_cols=20 Identities=20% Similarity=0.383 Sum_probs=17.7
Q ss_pred EEEECCCCCcHHHHHHHHhC
Q 002236 661 FGMLGPNGAGKTTFISMMIG 680 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~G 680 (949)
++++|+.|+|||||++-+.+
T Consensus 5 v~liG~~~vGKSsLi~rl~~ 24 (164)
T d1z2aa1 5 MVVVGNGAVGKSSMIQRYCK 24 (164)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 67999999999999987764
No 148
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]}
Probab=88.45 E-value=0.2 Score=46.67 Aligned_cols=30 Identities=20% Similarity=0.250 Sum_probs=22.6
Q ss_pred EEEEECCCCCcHHHHHHHHhC-----CCCCCcceE
Q 002236 660 CFGMLGPNGAGKTTFISMMIG-----ITRTTSGTA 689 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~G-----l~~ptsG~I 689 (949)
-+.|+|..|+|||||++.+++ .+.||.|..
T Consensus 6 KivlvG~~~vGKTsli~~~~~~~f~~~~~~T~~~~ 40 (168)
T d1u8za_ 6 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADS 40 (168)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSCCCSCCCTTCCEE
T ss_pred EEEEECCCCcCHHHHHHHHHhCCCCcccCCccccc
Confidence 367999999999999998754 235665543
No 149
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.19 E-value=0.12 Score=48.30 Aligned_cols=23 Identities=26% Similarity=0.537 Sum_probs=19.5
Q ss_pred EEEECCCCCcHHHHHHHHhCCCC
Q 002236 661 FGMLGPNGAGKTTFISMMIGITR 683 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl~~ 683 (949)
++++|..|+|||||++.+.|...
T Consensus 4 i~lvG~~~vGKTsLi~~~~~~~~ 26 (168)
T d2gjsa1 4 VLLLGAPGVGKSALARIFGGVED 26 (168)
T ss_dssp EEEECCTTSSHHHHHHHHHTC--
T ss_pred EEEECCCCcCHHHHHHHHhCCcc
Confidence 67999999999999999988643
No 150
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=88.16 E-value=0.1 Score=56.48 Aligned_cols=23 Identities=35% Similarity=0.717 Sum_probs=21.0
Q ss_pred EEEECCCCCcHHHHHHHHhCCCC
Q 002236 661 FGMLGPNGAGKTTFISMMIGITR 683 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl~~ 683 (949)
++|+|..|+|||||+|.|.|.-.
T Consensus 59 Iai~G~~n~GKSSLiNaL~G~~~ 81 (400)
T d1tq4a_ 59 VAVTGETGSGKSSFINTLRGIGN 81 (400)
T ss_dssp EEEEECTTSSHHHHHHHHHTCCT
T ss_pred EEEECCCCCCHHHHHHHHhCCCc
Confidence 79999999999999999999643
No 151
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=87.98 E-value=0.14 Score=49.34 Aligned_cols=24 Identities=38% Similarity=0.535 Sum_probs=21.6
Q ss_pred EEeCCcEEEEECCCCCcHHHHHHH
Q 002236 654 ALPSGECFGMLGPNGAGKTTFISM 677 (949)
Q Consensus 654 ~v~~Gei~gLLG~NGAGKTTLlk~ 677 (949)
.+++|+++.|.|++|+||||+.--
T Consensus 22 Gi~~G~~~~I~G~~G~GKT~la~~ 45 (242)
T d1tf7a1 22 GLPIGRSTLVSGTSGTGKTLFSIQ 45 (242)
T ss_dssp SEETTSEEEEEESTTSSHHHHHHH
T ss_pred CCcCCeEEEEEeCCCCCHHHHHHH
Confidence 488999999999999999999743
No 152
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=87.95 E-value=0.12 Score=48.91 Aligned_cols=21 Identities=33% Similarity=0.476 Sum_probs=18.5
Q ss_pred EEEECCCCCcHHHHHHHHhCC
Q 002236 661 FGMLGPNGAGKTTFISMMIGI 681 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl 681 (949)
+.|+||-||||||+.+.|+--
T Consensus 5 Ivl~G~pGSGKtT~a~~La~~ 25 (180)
T d1akya1 5 MVLIGPPGAGKGTQAPNLQER 25 (180)
T ss_dssp EEEECCTTSSHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHH
Confidence 558899999999999999854
No 153
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=87.94 E-value=0.12 Score=49.76 Aligned_cols=23 Identities=26% Similarity=0.312 Sum_probs=19.8
Q ss_pred EEEEECCCCCcHHHHHHHHhCCC
Q 002236 660 CFGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
.+.|+||.||||||+-+.|+--+
T Consensus 8 rIiliG~PGSGKtT~a~~La~~~ 30 (189)
T d2ak3a1 8 RAAIMGAPGSGKGTVSSRITKHF 30 (189)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHB
T ss_pred eEEEECCCCCCHHHHHHHHHHHH
Confidence 46789999999999999998643
No 154
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=87.75 E-value=0.13 Score=50.66 Aligned_cols=23 Identities=26% Similarity=0.340 Sum_probs=19.6
Q ss_pred CcEEEEECCCCCcHHHHHHHHhC
Q 002236 658 GECFGMLGPNGAGKTTFISMMIG 680 (949)
Q Consensus 658 Gei~gLLG~NGAGKTTLlk~L~G 680 (949)
+.++.|.||.|+|||||++.++-
T Consensus 29 ~~~i~i~G~~G~GKTsLl~~~~~ 51 (283)
T d2fnaa2 29 APITLVLGLRRTGKSSIIKIGIN 51 (283)
T ss_dssp SSEEEEEESTTSSHHHHHHHHHH
T ss_pred CCEEEEEcCCCCcHHHHHHHHHH
Confidence 35788999999999999987753
No 155
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=87.72 E-value=0.12 Score=50.81 Aligned_cols=25 Identities=20% Similarity=0.388 Sum_probs=22.0
Q ss_pred EEeCCcEEEEECCCCCcHHHHHHHH
Q 002236 654 ALPSGECFGMLGPNGAGKTTFISMM 678 (949)
Q Consensus 654 ~v~~Gei~gLLG~NGAGKTTLlk~L 678 (949)
.+++|+++-|.|+.|+||||+.--+
T Consensus 32 Glp~G~~~li~G~pGsGKT~~~lq~ 56 (254)
T d1pzna2 32 GIETQAITEVFGEFGSGKTQLAHTL 56 (254)
T ss_dssp SEESSEEEEEEESTTSSHHHHHHHH
T ss_pred CccCCEEEEEEcCCCCCHHHHHHHH
Confidence 3889999999999999999997533
No 156
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]}
Probab=87.68 E-value=0.084 Score=49.48 Aligned_cols=23 Identities=35% Similarity=0.309 Sum_probs=19.8
Q ss_pred EEEECCCCCcHHHHHHHHhCCCC
Q 002236 661 FGMLGPNGAGKTTFISMMIGITR 683 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl~~ 683 (949)
+.++|+.|+|||||++.+.+-..
T Consensus 15 IvlvG~~~vGKTSli~rl~~~~~ 37 (173)
T d1e0sa_ 15 ILMLGLDAAGKTTILYKLKLGQS 37 (173)
T ss_dssp EEEEEETTSSHHHHHHHTTCCCC
T ss_pred EEEECCCCCCHHHHHHHHhcCCC
Confidence 56999999999999999986543
No 157
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.47 E-value=0.15 Score=47.37 Aligned_cols=20 Identities=20% Similarity=0.516 Sum_probs=17.9
Q ss_pred EEEECCCCCcHHHHHHHHhC
Q 002236 661 FGMLGPNGAGKTTFISMMIG 680 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~G 680 (949)
+.|+|..|+|||||++.+.+
T Consensus 7 ivlvG~~~vGKTsli~~~~~ 26 (166)
T d1z0fa1 7 YIIIGDMGVGKSCLLHQFTE 26 (166)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 68999999999999987765
No 158
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=87.44 E-value=0.15 Score=49.27 Aligned_cols=25 Identities=28% Similarity=0.319 Sum_probs=22.8
Q ss_pred EeCCcEEEEECCCCCcHHHHHHHHh
Q 002236 655 LPSGECFGMLGPNGAGKTTFISMMI 679 (949)
Q Consensus 655 v~~Gei~gLLG~NGAGKTTLlk~L~ 679 (949)
+++|+++.|.|+.|+||||+.--++
T Consensus 31 l~~G~l~~i~G~~G~GKT~~~l~~a 55 (258)
T d2i1qa2 31 LESQSVTEFAGVFGSGKTQIMHQSC 55 (258)
T ss_dssp EETTEEEEEEESTTSSHHHHHHHHH
T ss_pred ccCCeEEEEEeCCCCCHHHHHHHHH
Confidence 8899999999999999999986664
No 159
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=87.31 E-value=0.12 Score=48.78 Aligned_cols=20 Identities=30% Similarity=0.619 Sum_probs=17.9
Q ss_pred EEEECCCCCcHHHHHHHHhC
Q 002236 661 FGMLGPNGAGKTTFISMMIG 680 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~G 680 (949)
++++|..|+|||||++.+++
T Consensus 5 v~vvG~~~vGKSSLi~~l~~ 24 (184)
T d1vg8a_ 5 VIILGDSGVGKTSLMNQYVN 24 (184)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 67999999999999987764
No 160
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=87.28 E-value=0.13 Score=50.16 Aligned_cols=21 Identities=33% Similarity=0.485 Sum_probs=19.0
Q ss_pred EEEECCCCCcHHHHHHHHhCC
Q 002236 661 FGMLGPNGAGKTTFISMMIGI 681 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl 681 (949)
+.|-||+|+||||+.+.++..
T Consensus 36 lll~Gp~G~GKTtl~~~i~~~ 56 (237)
T d1sxjd2 36 MLFYGPPGTGKTSTILALTKE 56 (237)
T ss_dssp EEEECSTTSSHHHHHHHHHHH
T ss_pred EEEECCCCCChHHHHHHHHHH
Confidence 578999999999999999864
No 161
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.23 E-value=0.15 Score=47.64 Aligned_cols=21 Identities=19% Similarity=0.485 Sum_probs=18.3
Q ss_pred EEEECCCCCcHHHHHHHHhCC
Q 002236 661 FGMLGPNGAGKTTFISMMIGI 681 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl 681 (949)
+.++|+.|+|||||++.+.+-
T Consensus 6 ivvvG~~~vGKTsli~r~~~~ 26 (173)
T d2a5ja1 6 YIIIGDTGVGKSCLLLQFTDK 26 (173)
T ss_dssp EEEESSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHhcC
Confidence 679999999999999987653
No 162
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.21 E-value=0.14 Score=47.21 Aligned_cols=20 Identities=30% Similarity=0.522 Sum_probs=18.4
Q ss_pred EEEECCCCCcHHHHHHHHhC
Q 002236 661 FGMLGPNGAGKTTFISMMIG 680 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~G 680 (949)
++++|..|+|||||++.+++
T Consensus 3 v~vvG~~~vGKTsLi~r~~~ 22 (164)
T d1yzqa1 3 LVFLGEQSVGKTSLITRFMY 22 (164)
T ss_dssp EEEEESTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 68999999999999998875
No 163
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.19 E-value=0.18 Score=47.30 Aligned_cols=23 Identities=26% Similarity=0.641 Sum_probs=20.3
Q ss_pred EEEECCCCCcHHHHHHHHhCCCC
Q 002236 661 FGMLGPNGAGKTTFISMMIGITR 683 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl~~ 683 (949)
+.++|..|+|||||++.+++...
T Consensus 6 v~lvG~~~vGKTsLi~~~~~~~~ 28 (172)
T d2g3ya1 6 VVLIGEQGVGKSTLANIFAGVHD 28 (172)
T ss_dssp EEEECCTTSSHHHHHHHHHCCCC
T ss_pred EEEECCCCcCHHHHHHHHHhCcC
Confidence 67999999999999999987643
No 164
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.12 E-value=0.24 Score=46.07 Aligned_cols=20 Identities=20% Similarity=0.612 Sum_probs=18.0
Q ss_pred EEEECCCCCcHHHHHHHHhC
Q 002236 661 FGMLGPNGAGKTTFISMMIG 680 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~G 680 (949)
+.|+|+.|+|||||++-+.+
T Consensus 5 i~lvG~~~vGKTsli~r~~~ 24 (168)
T d2atva1 5 LAIFGRAGVGKSALVVRFLT 24 (168)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHh
Confidence 57999999999999988875
No 165
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.08 E-value=0.16 Score=47.54 Aligned_cols=20 Identities=25% Similarity=0.562 Sum_probs=17.7
Q ss_pred EEEECCCCCcHHHHHHHHhC
Q 002236 661 FGMLGPNGAGKTTFISMMIG 680 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~G 680 (949)
+.++|..|+|||||++.+++
T Consensus 9 I~vvG~~~vGKSSli~~~~~ 28 (174)
T d1wmsa_ 9 VILLGDGGVGKSSLMNRYVT 28 (174)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHh
Confidence 67999999999999987764
No 166
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.03 E-value=0.14 Score=47.66 Aligned_cols=20 Identities=25% Similarity=0.508 Sum_probs=18.4
Q ss_pred EEEECCCCCcHHHHHHHHhC
Q 002236 661 FGMLGPNGAGKTTFISMMIG 680 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~G 680 (949)
+.|+|..|+|||||++.+++
T Consensus 8 i~lvG~~~vGKTsLi~~l~~ 27 (171)
T d2ew1a1 8 IVLIGNAGVGKTCLVRRFTQ 27 (171)
T ss_dssp EEEEESTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 68999999999999998875
No 167
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=86.92 E-value=0.23 Score=46.33 Aligned_cols=20 Identities=20% Similarity=0.454 Sum_probs=17.7
Q ss_pred EEEECCCCCcHHHHHHHHhC
Q 002236 661 FGMLGPNGAGKTTFISMMIG 680 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~G 680 (949)
+.++|..|+|||||++-+.+
T Consensus 7 i~lvG~~~vGKTsll~~~~~ 26 (169)
T d1x1ra1 7 LVVVGDGGVGKSALTIQFFQ 26 (169)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 57899999999999998765
No 168
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.89 E-value=0.14 Score=47.66 Aligned_cols=20 Identities=25% Similarity=0.355 Sum_probs=17.8
Q ss_pred EEEECCCCCcHHHHHHHHhC
Q 002236 661 FGMLGPNGAGKTTFISMMIG 680 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~G 680 (949)
+.|+|..|+|||||++.+.+
T Consensus 6 ivlvG~~~vGKTsLi~r~~~ 25 (167)
T d1z08a1 6 VVLLGEGCVGKTSLVLRYCE 25 (167)
T ss_dssp EEEECCTTSCHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 57999999999999997764
No 169
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.85 E-value=0.17 Score=46.89 Aligned_cols=21 Identities=24% Similarity=0.428 Sum_probs=18.6
Q ss_pred EEEECCCCCcHHHHHHHHhCC
Q 002236 661 FGMLGPNGAGKTTFISMMIGI 681 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl 681 (949)
+.|+|..|+|||||++-+++-
T Consensus 6 i~lvG~~~vGKTsLi~r~~~~ 26 (167)
T d1kaoa_ 6 VVVLGSGGVGKSALTVQFVTG 26 (167)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 689999999999999888653
No 170
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=86.79 E-value=0.17 Score=46.63 Aligned_cols=20 Identities=20% Similarity=0.315 Sum_probs=18.0
Q ss_pred EEEECCCCCcHHHHHHHHhC
Q 002236 661 FGMLGPNGAGKTTFISMMIG 680 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~G 680 (949)
+.++|..|+|||||++.+.+
T Consensus 5 v~liG~~~vGKTsLl~~~~~ 24 (165)
T d1z06a1 5 IIVIGDSNVGKTCLTYRFCA 24 (165)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 67999999999999998764
No 171
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
Probab=86.67 E-value=0.15 Score=53.52 Aligned_cols=24 Identities=29% Similarity=0.432 Sum_probs=20.9
Q ss_pred CcEEEEECCCCCcHHHHHHHHhCC
Q 002236 658 GECFGMLGPNGAGKTTFISMMIGI 681 (949)
Q Consensus 658 Gei~gLLG~NGAGKTTLlk~L~Gl 681 (949)
.-++||.|+-|||||||+.-|...
T Consensus 51 ~~~igitG~pGaGKSTli~~l~~~ 74 (323)
T d2qm8a1 51 AIRVGITGVPGVGKSTTIDALGSL 74 (323)
T ss_dssp SEEEEEECCTTSCHHHHHHHHHHH
T ss_pred ceEEeeeCCCCCCHHHHHHHHHHH
Confidence 457999999999999999988753
No 172
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=86.65 E-value=0.14 Score=47.51 Aligned_cols=20 Identities=25% Similarity=0.554 Sum_probs=18.1
Q ss_pred EEEECCCCCcHHHHHHHHhC
Q 002236 661 FGMLGPNGAGKTTFISMMIG 680 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~G 680 (949)
++|+|..|+|||||++-+.+
T Consensus 7 i~lvG~~~vGKTsli~rl~~ 26 (167)
T d1z0ja1 7 VCLLGDTGVGKSSIMWRFVE 26 (167)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 67999999999999988874
No 173
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.63 E-value=0.18 Score=49.27 Aligned_cols=26 Identities=19% Similarity=0.190 Sum_probs=23.5
Q ss_pred EEeCCcEEEEECCCCCcHHHHHHHHh
Q 002236 654 ALPSGECFGMLGPNGAGKTTFISMMI 679 (949)
Q Consensus 654 ~v~~Gei~gLLG~NGAGKTTLlk~L~ 679 (949)
.+++|+++.|.|+.|+||||+.-.++
T Consensus 33 Gip~G~~~~i~G~~GsGKT~lalq~~ 58 (258)
T d1v5wa_ 33 GIESMAITEAFGEFRTGKTQLSHTLC 58 (258)
T ss_dssp SBCSSEEEEEECCTTCTHHHHHHHHH
T ss_pred CCcCCEEEEEECCCCCCHHHHHHHHH
Confidence 48899999999999999999987665
No 174
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho, ATPase domain {Escherichia coli [TaxId: 562]}
Probab=86.24 E-value=0.15 Score=52.92 Aligned_cols=31 Identities=19% Similarity=0.224 Sum_probs=26.6
Q ss_pred EEEeCCcEEEEECCCCCcHHHHHHHHhCCCC
Q 002236 653 LALPSGECFGMLGPNGAGKTTFISMMIGITR 683 (949)
Q Consensus 653 l~v~~Gei~gLLG~NGAGKTTLlk~L~Gl~~ 683 (949)
+.|-+|+-.+|+|+.|+|||||+.+|+--..
T Consensus 38 ~PigrGQr~~I~g~~g~GKT~l~~~i~~~~~ 68 (289)
T d1xpua3 38 SPIGRGQRGLIVAPPKAGKTMLLQNIAQSIA 68 (289)
T ss_dssp SCCBTTCEEEEEECSSSSHHHHHHHHHHHHH
T ss_pred ccccCCCeeeEeCCCCCCHHHHHHHHHHHHh
Confidence 4567899999999999999999999986443
No 175
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.20 E-value=0.14 Score=48.08 Aligned_cols=21 Identities=19% Similarity=0.284 Sum_probs=18.2
Q ss_pred EEEECCCCCcHHHHHHHHhCC
Q 002236 661 FGMLGPNGAGKTTFISMMIGI 681 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl 681 (949)
+.++|..|+|||||++.+++-
T Consensus 5 ivvvG~~~vGKTsLi~~~~~~ 25 (177)
T d1kmqa_ 5 LVIVGDGACGKTCLLIVNSKD 25 (177)
T ss_dssp EEEEESTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 579999999999999887753
No 176
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.13 E-value=0.19 Score=47.13 Aligned_cols=20 Identities=20% Similarity=0.509 Sum_probs=18.3
Q ss_pred EEEECCCCCcHHHHHHHHhC
Q 002236 661 FGMLGPNGAGKTTFISMMIG 680 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~G 680 (949)
+.++|..|+|||||++.+++
T Consensus 10 i~vvG~~~vGKTsli~~l~~ 29 (177)
T d1x3sa1 10 ILIIGESGVGKSSLLLRFTD 29 (177)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 67999999999999998876
No 177
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=86.02 E-value=0.18 Score=48.23 Aligned_cols=20 Identities=20% Similarity=0.471 Sum_probs=18.2
Q ss_pred EEEECCCCCcHHHHHHHHhC
Q 002236 661 FGMLGPNGAGKTTFISMMIG 680 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~G 680 (949)
++++|+.|+|||||++.+++
T Consensus 9 ivvvG~~~vGKTsli~~l~~ 28 (194)
T d2bcgy1 9 LLLIGNSGVGKSCLLLRFSD 28 (194)
T ss_dssp EEEEESTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHhh
Confidence 78999999999999998775
No 178
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=85.95 E-value=0.19 Score=48.12 Aligned_cols=23 Identities=30% Similarity=0.527 Sum_probs=19.8
Q ss_pred EEEEECCCCCcHHHHHHHHhCCC
Q 002236 660 CFGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
+++|-|.-||||||+++.|..-+
T Consensus 2 lI~ieG~dGsGKST~~~~L~~~l 24 (208)
T d1gsia_ 2 LIAIEGVDGAGKRTLVEKLSGAF 24 (208)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
Confidence 47888999999999999988644
No 179
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=85.93 E-value=0.1 Score=54.13 Aligned_cols=24 Identities=29% Similarity=0.400 Sum_probs=18.4
Q ss_pred EEEEECCCCCcHHHHHHHHhCCCC
Q 002236 660 CFGMLGPNGAGKTTFISMMIGITR 683 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~Gl~~ 683 (949)
++||-|++||||||+.+.|.-++.
T Consensus 6 IIgIaG~SGSGKTTva~~l~~i~~ 29 (288)
T d1a7ja_ 6 IISVTGSSGAGTSTVKHTFDQIFR 29 (288)
T ss_dssp EEEEESCC---CCTHHHHHHHHHH
T ss_pred EEEEECCCCCcHHHHHHHHHHHHh
Confidence 899999999999999998877654
No 180
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=85.62 E-value=0.18 Score=49.44 Aligned_cols=24 Identities=33% Similarity=0.506 Sum_probs=20.5
Q ss_pred EEEECCCCCcHHHHHHHHhCCCCC
Q 002236 661 FGMLGPNGAGKTTFISMMIGITRT 684 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl~~p 684 (949)
+-|.||.|+||||+.++|+..+..
T Consensus 38 ~L~~GPpGtGKT~lA~~la~~~~~ 61 (238)
T d1in4a2 38 VLLAGPPGLGKTTLAHIIASELQT 61 (238)
T ss_dssp EEEESSTTSSHHHHHHHHHHHHTC
T ss_pred EEEECCCCCcHHHHHHHHHhccCC
Confidence 568999999999999999875543
No 181
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=85.55 E-value=0.18 Score=47.58 Aligned_cols=27 Identities=33% Similarity=0.441 Sum_probs=22.3
Q ss_pred EEEECCCCCcHHHHHHHHhC--CCCCCcc
Q 002236 661 FGMLGPNGAGKTTFISMMIG--ITRTTSG 687 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~G--l~~ptsG 687 (949)
+.|||..|+|||||++.+.- -..||-|
T Consensus 5 ivllG~~~vGKTsll~r~~f~~~~~pTiG 33 (200)
T d1zcba2 5 ILLLGAGESGKSTFLKQMRIIHGQDPTKG 33 (200)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHSCCCCSS
T ss_pred EEEECCCCCCHHHHHHHHhcCCCCCCeee
Confidence 67999999999999998843 2457888
No 182
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=85.55 E-value=0.36 Score=46.40 Aligned_cols=42 Identities=21% Similarity=0.351 Sum_probs=31.2
Q ss_pred ceeeeeEEEEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcceEEEcC
Q 002236 646 VAVNGLSLALPSGECFGMLGPNGAGKTTFISMMIGITRTTSGTAYVQG 693 (949)
Q Consensus 646 ~al~~lSl~v~~Gei~gLLG~NGAGKTTLlk~L~Gl~~ptsG~I~i~G 693 (949)
..++.-.+.+ .|.-+.|.|++|+|||||.-.|.- .|.-.+.+
T Consensus 4 ~~~H~~~v~~-~g~gvli~G~sG~GKS~lal~l~~-----~G~~lvaD 45 (177)
T d1knxa2 4 AQIHGVLLEV-FGVGVLLTGRSGIGKSECALDLIN-----KNHLFVGD 45 (177)
T ss_dssp EEEEEEEEEE-TTEEEEEEESSSSSHHHHHHHHHT-----TTCEEEEE
T ss_pred ceEEEEEEEE-CCEEEEEEcCCCCCHHHHHHHHHH-----cCCceecC
Confidence 3566666666 788999999999999999876653 46555544
No 183
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.27 E-value=0.17 Score=47.44 Aligned_cols=20 Identities=25% Similarity=0.489 Sum_probs=17.8
Q ss_pred EEEECCCCCcHHHHHHHHhC
Q 002236 661 FGMLGPNGAGKTTFISMMIG 680 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~G 680 (949)
+.|+|..|+|||||++-+.+
T Consensus 9 v~lvG~~~vGKTsLi~r~~~ 28 (173)
T d2fn4a1 9 LVVVGGGGVGKSALTIQFIQ 28 (173)
T ss_dssp EEEEECTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 67999999999999987764
No 184
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.21 E-value=0.17 Score=47.29 Aligned_cols=20 Identities=30% Similarity=0.647 Sum_probs=18.1
Q ss_pred EEEECCCCCcHHHHHHHHhC
Q 002236 661 FGMLGPNGAGKTTFISMMIG 680 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~G 680 (949)
++++|..|+|||||++-+.+
T Consensus 8 I~lvG~~~vGKTsll~~~~~ 27 (174)
T d2bmea1 8 FLVIGNAGTGKSCLLHQFIE 27 (174)
T ss_dssp EEEEESTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 78999999999999998764
No 185
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=85.07 E-value=0.31 Score=45.93 Aligned_cols=30 Identities=20% Similarity=0.278 Sum_probs=21.4
Q ss_pred EEEECCCCCcHHHHHHHH-hCC----CCCCcceEE
Q 002236 661 FGMLGPNGAGKTTFISMM-IGI----TRTTSGTAY 690 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L-~Gl----~~ptsG~I~ 690 (949)
+.++|..|+|||||++-+ .|- +.||-|...
T Consensus 5 ivliG~~~vGKTsli~r~~~~~f~~~~~~t~~~~~ 39 (179)
T d1m7ba_ 5 IVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENY 39 (179)
T ss_dssp EEEEESTTSSHHHHHHHHHHSCCCSSCCCCSEEEE
T ss_pred EEEECCCCcCHHHHHHHHHhCCCCCccCCceeecc
Confidence 679999999999999755 443 345555433
No 186
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=84.83 E-value=0.21 Score=51.92 Aligned_cols=25 Identities=28% Similarity=0.504 Sum_probs=21.6
Q ss_pred CcEEEEECCCCCcHHHHHHHHhCCC
Q 002236 658 GECFGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 658 Gei~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
+..+.|+||.|+|||+|.|.|+...
T Consensus 49 ~~~iLl~GPpG~GKT~lAkalA~~~ 73 (309)
T d1ofha_ 49 PKNILMIGPTGVGKTEIARRLAKLA 73 (309)
T ss_dssp CCCEEEECCTTSSHHHHHHHHHHHH
T ss_pred CceEEEECCCCCCHHHHHHHHhhcc
Confidence 3466799999999999999999864
No 187
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.82 E-value=0.14 Score=47.93 Aligned_cols=21 Identities=33% Similarity=0.572 Sum_probs=17.5
Q ss_pred EEEECCCCCcHHHHHHHHhCC
Q 002236 661 FGMLGPNGAGKTTFISMMIGI 681 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl 681 (949)
++++|..|+|||||++.+++-
T Consensus 6 i~vvG~~~vGKTsli~~~~~~ 26 (170)
T d1i2ma_ 6 LVLVGDGGTGKTTFVKRHLTG 26 (170)
T ss_dssp EEEEECTTSSHHHHHHTTC--
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 689999999999999987653
No 188
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=84.75 E-value=0.43 Score=45.74 Aligned_cols=33 Identities=18% Similarity=0.333 Sum_probs=24.8
Q ss_pred ceeeeeEEEEeCCcEEEEECCCCCcHHHHHHHHh
Q 002236 646 VAVNGLSLALPSGECFGMLGPNGAGKTTFISMMI 679 (949)
Q Consensus 646 ~al~~lSl~v~~Gei~gLLG~NGAGKTTLlk~L~ 679 (949)
..++.--+.+ .|.-+.|.|++|+||||+.-.|.
T Consensus 3 ~~lH~~~v~~-~g~gvl~~G~sG~GKStlal~l~ 35 (176)
T d1kkma_ 3 RSMHGVLVDI-YGLGVLITGDSGVGKSETALELV 35 (176)
T ss_dssp EEEEEEEEEE-TTEEEEEECCTTSCHHHHHHHHH
T ss_pred ceEEEEEEEE-CCEEEEEEeCCCCCHHHHHHHHH
Confidence 3455555544 57889999999999999886654
No 189
>d1wxqa1 c.37.1.8 (A:1-319) GTP-binding protein PH0525 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=84.71 E-value=0.2 Score=51.89 Aligned_cols=22 Identities=32% Similarity=0.566 Sum_probs=19.5
Q ss_pred EEEECCCCCcHHHHHHHHhCCC
Q 002236 661 FGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
+||+|..-+||||||+.|||--
T Consensus 3 v~lvG~pn~GKStlfn~lt~~~ 24 (319)
T d1wxqa1 3 IGVVGKPNVGKSTFFSAATLVD 24 (319)
T ss_dssp EEEEECTTSSHHHHHHHHHC--
T ss_pred EeEECCCCCCHHHHHHHHHCCC
Confidence 7999999999999999999963
No 190
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]}
Probab=84.68 E-value=0.26 Score=50.23 Aligned_cols=43 Identities=28% Similarity=0.499 Sum_probs=32.6
Q ss_pred EEeCCcEEEEECCCCCcHHHHHHHHhC-CCCCCcceEEEcCeec
Q 002236 654 ALPSGECFGMLGPNGAGKTTFISMMIG-ITRTTSGTAYVQGLDI 696 (949)
Q Consensus 654 ~v~~Gei~gLLG~NGAGKTTLlk~L~G-l~~ptsG~I~i~G~di 696 (949)
.+++|.++-|.||+|+||||+.-.++. ..++..--++++.+.-
T Consensus 50 Gi~~g~itei~G~~gsGKTtl~l~~~~~~q~~g~~~vyidtE~~ 93 (263)
T d1u94a1 50 GLPMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHA 93 (263)
T ss_dssp SEETTSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CccCceEEEEecCCCcHHHHHHHHHHHHHHcCCCEEEEEccccc
Confidence 578999999999999999999855554 3445444578877653
No 191
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=84.61 E-value=0.22 Score=48.80 Aligned_cols=27 Identities=22% Similarity=0.346 Sum_probs=22.9
Q ss_pred cEEEEECCCCCcHHHHHHHHhCCCCCC
Q 002236 659 ECFGMLGPNGAGKTTFISMMIGITRTT 685 (949)
Q Consensus 659 ei~gLLG~NGAGKTTLlk~L~Gl~~pt 685 (949)
..+.|.||.|+||||+++.|+-.++-.
T Consensus 44 ~~lll~GppGtGKT~l~~~l~~~l~~~ 70 (276)
T d1fnna2 44 PRATLLGRPGTGKTVTLRKLWELYKDK 70 (276)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHTTS
T ss_pred CceEEECCCCCCHHHHHHHHHHHHhcc
Confidence 477899999999999999998776543
No 192
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.59 E-value=0.25 Score=45.86 Aligned_cols=20 Identities=20% Similarity=0.514 Sum_probs=17.9
Q ss_pred EEEECCCCCcHHHHHHHHhC
Q 002236 661 FGMLGPNGAGKTTFISMMIG 680 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~G 680 (949)
+.++|..|+|||||++-+.+
T Consensus 9 i~vvG~~~vGKTsLi~~l~~ 28 (170)
T d1r2qa_ 9 LVLLGESAVGKSSLVLRFVK 28 (170)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 58999999999999988774
No 193
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=84.51 E-value=0.22 Score=48.56 Aligned_cols=43 Identities=12% Similarity=0.261 Sum_probs=31.5
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEcCCHHH
Q 002236 783 NPKVVYMDEPSTGLDPASRNNLWNVVKRAKQGRAIILTTHSMEE 826 (949)
Q Consensus 783 ~P~vllLDEPTsGLDp~sr~~l~~~L~~~~~g~tIIltTH~mee 826 (949)
+.+++++||.- +|...++..+...+.+......+++++++.+.
T Consensus 101 ~~kviiiDe~d-~~~~~~~~~ll~~~e~~~~~~~~i~~~~~~~~ 143 (224)
T d1sxjb2 101 KHKIVILDEAD-SMTAGAQQALRRTMELYSNSTRFAFACNQSNK 143 (224)
T ss_dssp CCEEEEEESGG-GSCHHHHHTTHHHHHHTTTTEEEEEEESCGGG
T ss_pred ceEEEEEeccc-ccchhHHHHHhhhccccccceeeeeccCchhh
Confidence 36799999965 56666777777777666667778888887754
No 194
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=84.42 E-value=0.2 Score=49.20 Aligned_cols=22 Identities=32% Similarity=0.528 Sum_probs=19.2
Q ss_pred EEEECCCCCcHHHHHHHHhCCC
Q 002236 661 FGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
+-|.||.|.||||+.+++++.+
T Consensus 38 ~Ll~GPpG~GKTtla~~la~~~ 59 (239)
T d1ixsb2 38 LLLFGPPGLGKTTLAHVIAHEL 59 (239)
T ss_dssp EEEECCTTSCHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHh
Confidence 4589999999999999998753
No 195
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=84.17 E-value=0.21 Score=48.75 Aligned_cols=20 Identities=30% Similarity=0.439 Sum_probs=18.4
Q ss_pred EEEECCCCCcHHHHHHHHhC
Q 002236 661 FGMLGPNGAGKTTFISMMIG 680 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~G 680 (949)
+|++||-+||||||+..|++
T Consensus 6 i~iiGhvd~GKSTL~~~Ll~ 25 (204)
T d2c78a3 6 VGTIGHVDHGKTTLTAALTY 25 (204)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEEeCCCCcHHHHHHHHHH
Confidence 79999999999999999964
No 196
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.11 E-value=0.22 Score=46.31 Aligned_cols=20 Identities=25% Similarity=0.471 Sum_probs=17.5
Q ss_pred EEEECCCCCcHHHHHHHHhC
Q 002236 661 FGMLGPNGAGKTTFISMMIG 680 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~G 680 (949)
++++|+.|+|||||++-+.+
T Consensus 9 i~vvG~~~vGKTsli~~~~~ 28 (170)
T d2g6ba1 9 VMLVGDSGVGKTCLLVRFKD 28 (170)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 78999999999999986543
No 197
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.84 E-value=0.22 Score=46.87 Aligned_cols=21 Identities=19% Similarity=0.238 Sum_probs=18.4
Q ss_pred EEEEECCCCCcHHHHHHHHhC
Q 002236 660 CFGMLGPNGAGKTTFISMMIG 680 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~G 680 (949)
-++|+|..|+|||||++.+.+
T Consensus 7 KivviG~~~vGKTsli~~~~~ 27 (183)
T d1mh1a_ 7 KCVVVGDGAVGKTCLLISYTT 27 (183)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 378999999999999987764
No 198
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=83.77 E-value=0.29 Score=47.28 Aligned_cols=24 Identities=33% Similarity=0.556 Sum_probs=21.5
Q ss_pred EEEEECCCCCcHHHHHHHHhCCCC
Q 002236 660 CFGMLGPNGAGKTTFISMMIGITR 683 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~Gl~~ 683 (949)
-+|++|+=.||||||++.|+|...
T Consensus 10 ni~iiGhVd~GKSTL~~~L~~~~~ 33 (205)
T d2qn6a3 10 NIGVVGHVDHGKTTLVQAITGIWT 33 (205)
T ss_dssp EEEEECSTTSSHHHHHHHHHSCCC
T ss_pred EEEEEEccCCcHHHHHHHHHhhhc
Confidence 489999999999999999998654
No 199
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=83.30 E-value=0.18 Score=47.11 Aligned_cols=20 Identities=25% Similarity=0.433 Sum_probs=8.4
Q ss_pred EEEECCCCCcHHHHHHHHhC
Q 002236 661 FGMLGPNGAGKTTFISMMIG 680 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~G 680 (949)
+.++|..|+|||||++.+++
T Consensus 9 i~vvG~~~vGKTsLi~~l~~ 28 (173)
T d2fu5c1 9 LLLIGDSGVGKTCVLFRFSE 28 (173)
T ss_dssp EEEECCCCC-----------
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 68999999999999987765
No 200
>d2dy1a2 c.37.1.8 (A:8-274) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus, EF-G-2 [TaxId: 274]}
Probab=83.26 E-value=0.27 Score=50.25 Aligned_cols=23 Identities=30% Similarity=0.601 Sum_probs=19.6
Q ss_pred EEEEECCCCCcHHHHHHHH---hCCC
Q 002236 660 CFGMLGPNGAGKTTFISMM---IGIT 682 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L---~Gl~ 682 (949)
-++|+||-|+|||||...| +|..
T Consensus 4 Nv~iiGh~~~GKTtL~e~ll~~~g~~ 29 (267)
T d2dy1a2 4 TVALVGHAGSGKTTLTEALLYKTGAK 29 (267)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHTTSS
T ss_pred EEEEEcCCCCcHHHHHHHHHHHcCCc
Confidence 3789999999999999988 5544
No 201
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=83.25 E-value=0.23 Score=53.54 Aligned_cols=48 Identities=21% Similarity=0.271 Sum_probs=33.6
Q ss_pred HHHHHHcCCCcEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEcCCHHHHH
Q 002236 775 SVAISLIGNPKVVYMDEPSTGLDPASRNNLWNVVKRAKQGRAIILTTHSMEEAE 828 (949)
Q Consensus 775 slA~ALi~~P~vllLDEPTsGLDp~sr~~l~~~L~~~~~g~tIIltTH~meeae 828 (949)
++..+|=.||+|++..|-. |+.+.+. .++.+..|+.|+-|-|--+-+.
T Consensus 219 ~l~~~lR~dPDvi~igEiR---d~~ta~~---a~~aa~tGhlV~tTlHa~~a~~ 266 (401)
T d1p9ra_ 219 GLRAILRQDPDVVMVGEIR---DLETAQI---AVQASLTGHLVMSTLHTNTAVG 266 (401)
T ss_dssp HHHHHGGGCCSEEEESCCC---SHHHHHH---HHHHHHTTCEEEEEECCSSSHH
T ss_pred HHHHHHhhcCCEEEecCcC---ChHHHHH---HHHHHhcCCeEEEEeccCchHh
Confidence 4555677899999999986 4444333 3344567999999999755443
No 202
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.19 E-value=0.25 Score=45.72 Aligned_cols=20 Identities=25% Similarity=0.557 Sum_probs=17.9
Q ss_pred EEEECCCCCcHHHHHHHHhC
Q 002236 661 FGMLGPNGAGKTTFISMMIG 680 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~G 680 (949)
+.++|..|+|||||++-+.+
T Consensus 6 ivvvG~~~vGKTsli~r~~~ 25 (167)
T d1c1ya_ 6 LVVLGSGGVGKSALTVQFVQ 25 (167)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHc
Confidence 67999999999999998764
No 203
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.14 E-value=0.26 Score=46.65 Aligned_cols=20 Identities=20% Similarity=0.325 Sum_probs=17.9
Q ss_pred EEEECCCCCcHHHHHHHHhC
Q 002236 661 FGMLGPNGAGKTTFISMMIG 680 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~G 680 (949)
+.|+|..|+|||||++.++.
T Consensus 12 i~lvG~~~vGKTsLi~r~~~ 31 (185)
T d2atxa1 12 CVVVGDGAVGKTCLLMSYAN 31 (185)
T ss_dssp EEEEECTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHhh
Confidence 78999999999999988664
No 204
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=82.91 E-value=0.29 Score=50.52 Aligned_cols=74 Identities=20% Similarity=0.275 Sum_probs=44.2
Q ss_pred EEEEECCCCCcHHHHHHHHhCCCCCCcceEEEcCeecCccHHHhhccEEEEcCCCCCCCCCCHHHHHHHHhhh-------
Q 002236 660 CFGMLGPNGAGKTTFISMMIGITRTTSGTAYVQGLDIRTDMDRIYTSMGVCPQEDLLWETLTGREHLLFYGRL------- 732 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~Gl~~ptsG~I~i~G~di~~~~~~~r~~iG~~pQ~~~L~~~lTv~E~L~~~~~l------- 732 (949)
++||-|+.|||||||-+.|.-.+.- .......+.+++.++.. +|-.|...+....
T Consensus 29 iIGi~G~qGSGKSTl~~~l~~~L~~---------------~~~~~~~v~~iS~DdfY---~t~~~r~~L~~~~~~~pl~~ 90 (286)
T d1odfa_ 29 FIFFSGPQGSGKSFTSIQIYNHLME---------------KYGGEKSIGYASIDDFY---LTHEDQLKLNEQFKNNKLLQ 90 (286)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHH---------------HHGGGSCEEEEEGGGGB---CCHHHHHHHHHHTTTCGGGS
T ss_pred EEEeECCCCCCHHHHHHHHHHHHHH---------------HhCCCcceEeeccCCCC---CCHHHHHHHhhhccccccce
Confidence 8899999999999999877543210 00012346677776653 4555544443332
Q ss_pred -cCCCchhHHHHHHHHHHHc
Q 002236 733 -KNLKGPALTQAVEESLKSV 751 (949)
Q Consensus 733 -~g~~~~~~~~~v~~~L~~l 751 (949)
+|.++...-+...+.++.+
T Consensus 91 ~RG~PgThD~~ll~~~l~~l 110 (286)
T d1odfa_ 91 GRGLPGTHDMKLLQEVLNTI 110 (286)
T ss_dssp SSCSTTSBCHHHHHHHHHHH
T ss_pred ecCCCcchhHHHHHHHHHHH
Confidence 5666655555555666554
No 205
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=82.55 E-value=0.35 Score=48.89 Aligned_cols=24 Identities=33% Similarity=0.547 Sum_probs=20.9
Q ss_pred cEEEEECCCCCcHHHHHHHHhCCC
Q 002236 659 ECFGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 659 ei~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
.-+-|.||.|+|||++.+.|+..+
T Consensus 46 ~~iLL~GppGtGKT~la~~iA~~~ 69 (256)
T d1lv7a_ 46 KGVLMVGPPGTGKTLLAKAIAGEA 69 (256)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CeEEeeCCCCCCccHHHHHHHHHc
Confidence 456799999999999999999755
No 206
>d1jala1 c.37.1.8 (A:1-278) YchF GTP-binding protein N-terminal domain {Haemophilus influenzae [TaxId: 727]}
Probab=82.53 E-value=0.42 Score=48.52 Aligned_cols=22 Identities=23% Similarity=0.433 Sum_probs=20.1
Q ss_pred EEEEECCCCCcHHHHHHHHhCC
Q 002236 660 CFGMLGPNGAGKTTFISMMIGI 681 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~Gl 681 (949)
-+||+|-.-+||||||+.||+-
T Consensus 4 ~~GivG~Pn~GKSTlf~~lt~~ 25 (278)
T d1jala1 4 KCGIVGLPNVGKSTLFNALTKA 25 (278)
T ss_dssp EEEEECCTTSSHHHHHHHHHHT
T ss_pred eEEEECCCCCCHHHHHHHHHCC
Confidence 4799999999999999999964
No 207
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=82.44 E-value=0.29 Score=47.48 Aligned_cols=42 Identities=19% Similarity=0.322 Sum_probs=32.2
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEcCCHH
Q 002236 783 NPKVVYMDEPSTGLDPASRNNLWNVVKRAKQGRAIILTTHSME 825 (949)
Q Consensus 783 ~P~vllLDEPTsGLDp~sr~~l~~~L~~~~~g~tIIltTH~me 825 (949)
+.+++++||- -.+.+.....++..|.+.....-++++|++..
T Consensus 99 ~~kiiiiDe~-d~~~~~~~~~Ll~~le~~~~~~~~~~~~~~~~ 140 (227)
T d1sxjc2 99 GFKLIILDEA-DAMTNAAQNALRRVIERYTKNTRFCVLANYAH 140 (227)
T ss_dssp SCEEEEETTG-GGSCHHHHHHHHHHHHHTTTTEEEEEEESCGG
T ss_pred CeEEEEEecc-ccchhhHHHHHHHHhhhcccceeeccccCcHH
Confidence 3479999997 47888888989988887666666677777654
No 208
>d1ni3a1 c.37.1.8 (A:11-306) YchF GTP-binding protein N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=82.31 E-value=0.29 Score=50.30 Aligned_cols=22 Identities=27% Similarity=0.449 Sum_probs=20.5
Q ss_pred EEEEECCCCCcHHHHHHHHhCC
Q 002236 660 CFGMLGPNGAGKTTFISMMIGI 681 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~Gl 681 (949)
-+||+|...+||||||+.||+-
T Consensus 12 kiGivG~Pn~GKSTlfnalT~~ 33 (296)
T d1ni3a1 12 KTGIVGMPNVGKSTFFRAITKS 33 (296)
T ss_dssp EEEEEECSSSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHCC
Confidence 3899999999999999999975
No 209
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=82.05 E-value=0.29 Score=50.08 Aligned_cols=42 Identities=26% Similarity=0.548 Sum_probs=31.8
Q ss_pred EEeCCcEEEEECCCCCcHHHHHHHHhCCCCCCcce-EEEcCee
Q 002236 654 ALPSGECFGMLGPNGAGKTTFISMMIGITRTTSGT-AYVQGLD 695 (949)
Q Consensus 654 ~v~~Gei~gLLG~NGAGKTTLlk~L~Gl~~ptsG~-I~i~G~d 695 (949)
.++.|.++-+.||+|+||||+.-.++....-..|. |+|+.+.
T Consensus 56 G~~~g~i~e~~G~~~~GKT~l~l~~~~~~q~~g~~~vyIDtE~ 98 (269)
T d1mo6a1 56 GLPRGRVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEH 98 (269)
T ss_dssp SBCSSSEEEEECSSSSSHHHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CcccceeEEEecCCCcHHHHHHHHHHHHHhcCCCEEEEEECCc
Confidence 57899999999999999999975555443333444 6777765
No 210
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=82.03 E-value=0.23 Score=49.02 Aligned_cols=23 Identities=30% Similarity=0.551 Sum_probs=19.4
Q ss_pred EEEEECCCCCcHHHHHHHHhCCC
Q 002236 660 CFGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
++.|.||.|.||||+++.++-.+
T Consensus 48 ~l~l~GppGtGKT~l~~~l~~~l 70 (287)
T d1w5sa2 48 IYGSIGRVGIGKTTLAKFTVKRV 70 (287)
T ss_dssp EEECTTCCSSSHHHHHHHHHHHH
T ss_pred EEEeECCCCCCHHHHHHHHHHHH
Confidence 45667999999999999998654
No 211
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=81.29 E-value=0.32 Score=49.97 Aligned_cols=29 Identities=28% Similarity=0.320 Sum_probs=20.4
Q ss_pred EEEEECCCCCcHHHHHHHH---hCCCCCCcceE
Q 002236 660 CFGMLGPNGAGKTTFISMM---IGITRTTSGTA 689 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L---~Gl~~ptsG~I 689 (949)
-+||+||-|||||||...| +|.... .|++
T Consensus 8 ni~i~gh~~~GKTtL~e~ll~~~g~~~~-~g~v 39 (276)
T d2bv3a2 8 NIGIAAHIDAGKTTTTERILYYTGRIHK-IGEV 39 (276)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHTSSCC-----
T ss_pred EEEEEeCCCCCHHHHHHHHHHhcCcccc-ccce
Confidence 3799999999999999887 565543 3444
No 212
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Probab=80.58 E-value=0.32 Score=46.15 Aligned_cols=20 Identities=20% Similarity=0.297 Sum_probs=17.5
Q ss_pred EEEECCCCCcHHHHHHHHhC
Q 002236 661 FGMLGPNGAGKTTFISMMIG 680 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~G 680 (949)
++|+|..|+|||||++-+.+
T Consensus 6 vvllG~~~vGKTSli~r~~~ 25 (191)
T d2ngra_ 6 CVVVGDGAVGKTCLLISYTT 25 (191)
T ss_dssp EEEEESTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 78999999999999977654
No 213
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}
Probab=80.20 E-value=0.43 Score=46.78 Aligned_cols=22 Identities=18% Similarity=0.285 Sum_probs=19.8
Q ss_pred cEEEEECCCCCcHHHHHHHHhC
Q 002236 659 ECFGMLGPNGAGKTTFISMMIG 680 (949)
Q Consensus 659 ei~gLLG~NGAGKTTLlk~L~G 680 (949)
.++||.|.-||||||..++|..
T Consensus 2 ~iIgiTG~igSGKsTva~~l~e 23 (241)
T d1deka_ 2 KLIFLSGVKRSGKDTTADFIMS 23 (241)
T ss_dssp EEEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHH
Confidence 3789999999999999999954
No 214
>d1jwyb_ c.37.1.8 (B:) Dynamin G domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=79.79 E-value=0.46 Score=48.55 Aligned_cols=26 Identities=15% Similarity=0.362 Sum_probs=22.4
Q ss_pred EEEEECCCCCcHHHHHHHHhCCCC-CC
Q 002236 660 CFGMLGPNGAGKTTFISMMIGITR-TT 685 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~Gl~~-pt 685 (949)
.++++|.-+||||||++.|+|.-- |+
T Consensus 26 ~ivVvG~~ssGKSSliNaLlG~~~lP~ 52 (306)
T d1jwyb_ 26 QIVVVGSQSSGKSSVLENIVGRDFLPR 52 (306)
T ss_dssp EEEEEECSSSSHHHHHHHHHTSCCCCC
T ss_pred eEEEEeCCCCCHHHHHHHHhCCCCCCC
Confidence 378999999999999999999763 54
No 215
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=79.43 E-value=0.39 Score=48.16 Aligned_cols=21 Identities=24% Similarity=0.330 Sum_probs=18.9
Q ss_pred EEEECCCCCcHHHHHHHHhCC
Q 002236 661 FGMLGPNGAGKTTFISMMIGI 681 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl 681 (949)
+-|.||.|+|||++.+.|+..
T Consensus 43 vLL~GppGtGKT~la~alA~~ 63 (246)
T d1d2na_ 43 VLLEGPPHSGKTALAAKIAEE 63 (246)
T ss_dssp EEEECSTTSSHHHHHHHHHHH
T ss_pred EEEECcCCCCHHHHHHHHhhc
Confidence 568999999999999999864
No 216
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=79.03 E-value=0.43 Score=44.61 Aligned_cols=27 Identities=37% Similarity=0.481 Sum_probs=21.3
Q ss_pred EEEECCCCCcHHHHHHHHhC---CCCCCcc
Q 002236 661 FGMLGPNGAGKTTFISMMIG---ITRTTSG 687 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~G---l~~ptsG 687 (949)
+.|||..|+|||||++-+.. -..||-|
T Consensus 5 iv~lG~~~vGKTsll~r~~~~~~~~~pTiG 34 (200)
T d2bcjq2 5 LLLLGTGESGKSTFIKQMRIIHGSGVPTTG 34 (200)
T ss_dssp EEEEESTTSSHHHHHHHHHHHTSSCCCCCS
T ss_pred EEEECCCCCCHHHHHHHHhCCCCCCCceee
Confidence 57999999999999988854 2346655
No 217
>d1d2ea3 c.37.1.8 (A:55-250) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]}
Probab=78.61 E-value=0.44 Score=46.17 Aligned_cols=22 Identities=32% Similarity=0.480 Sum_probs=19.6
Q ss_pred EEEECCCCCcHHHHHHHHhCCC
Q 002236 661 FGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
+|++|+-++|||||++.|++..
T Consensus 6 i~iiGHvd~GKSTL~~~l~~~~ 27 (196)
T d1d2ea3 6 VGTIGHVDHGKTTLTAAITKIL 27 (196)
T ss_dssp EEEESSTTSSHHHHHHHHHHHH
T ss_pred EEEEeCCCCcHHHHHHHHHHHH
Confidence 7899999999999999998643
No 218
>d1jnya3 c.37.1.8 (A:4-227) Elongation factor eEF-1alpha, N-terminal (G) domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=78.45 E-value=0.45 Score=46.79 Aligned_cols=19 Identities=21% Similarity=0.487 Sum_probs=17.4
Q ss_pred EEEECCCCCcHHHHHHHHh
Q 002236 661 FGMLGPNGAGKTTFISMMI 679 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~ 679 (949)
+|++||-++|||||+..|.
T Consensus 6 i~viGHVd~GKTTL~~~Ll 24 (224)
T d1jnya3 6 LIVIGHVDHGKSTLVGRLL 24 (224)
T ss_dssp EEEEESTTSSHHHHHHHHH
T ss_pred EEEEecCCCCHHHHHHHHH
Confidence 7899999999999998884
No 219
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=78.24 E-value=0.26 Score=51.29 Aligned_cols=25 Identities=20% Similarity=0.367 Sum_probs=22.7
Q ss_pred EEEEECCCCCcHHHHHHHHhCCCCC
Q 002236 660 CFGMLGPNGAGKTTFISMMIGITRT 684 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~Gl~~p 684 (949)
-+-|.|+-|+||||+.|.|+++++|
T Consensus 30 ~vLl~G~pG~GKT~lar~~~~iLp~ 54 (333)
T d1g8pa_ 30 GVLVFGDRGTGKSTAVRALAALLPE 54 (333)
T ss_dssp CEEEECCGGGCTTHHHHHHHHHSCC
T ss_pred eEEEECCCCccHHHHHHHHHHhCCC
Confidence 3578899999999999999999976
No 220
>d1f5na2 c.37.1.8 (A:7-283) Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=78.10 E-value=0.47 Score=48.57 Aligned_cols=23 Identities=17% Similarity=0.398 Sum_probs=21.3
Q ss_pred EEEEECCCCCcHHHHHHHHhCCC
Q 002236 660 CFGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
+++++||-++|||||++.|.|..
T Consensus 34 vvsi~G~~~sGKS~llN~l~~~~ 56 (277)
T d1f5na2 34 VVAIVGLYRTGKSYLMNKLAGKK 56 (277)
T ss_dssp EEEEEEBTTSSHHHHHHHHTTCS
T ss_pred EEEEECCCCCCHHHHHHHHcCCC
Confidence 78999999999999999999854
No 221
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1 ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=77.72 E-value=0.55 Score=48.13 Aligned_cols=34 Identities=32% Similarity=0.511 Sum_probs=27.5
Q ss_pred ceeeeeEEEEeCCcEEEEECCCCCcHHHHHHHHhC
Q 002236 646 VAVNGLSLALPSGECFGMLGPNGAGKTTFISMMIG 680 (949)
Q Consensus 646 ~al~~lSl~v~~Gei~gLLG~NGAGKTTLlk~L~G 680 (949)
+|+|-+ +.+-+||..+|+|+.|+|||||+..|+-
T Consensus 57 raID~l-~pigkGQr~~If~~~g~GKt~l~~~i~~ 90 (276)
T d2jdid3 57 KVVDLL-APYAKGGKIGLFGGAGVGKTVLIMELIN 90 (276)
T ss_dssp HHHHHH-SCEETTCEEEEEECTTSSHHHHHHHHHH
T ss_pred eeeeee-ccccCCCEEEeeCCCCCCHHHHHHHHHH
Confidence 344433 6788999999999999999999877753
No 222
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=77.42 E-value=0.58 Score=47.45 Aligned_cols=22 Identities=23% Similarity=0.546 Sum_probs=20.6
Q ss_pred EEEECCCCCcHHHHHHHHhCCC
Q 002236 661 FGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
++++|.-.||||||++.|+|.-
T Consensus 29 ivvvG~~SsGKSsliNaLlg~~ 50 (299)
T d2akab1 29 IAVVGGQSAGKSSVLENFVGRD 50 (299)
T ss_dssp EEEEEBTTSCHHHHHHHHHTSC
T ss_pred EEEEcCCCCCHHHHHHHHhCCC
Confidence 7899999999999999999965
No 223
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=76.66 E-value=0.53 Score=47.21 Aligned_cols=22 Identities=32% Similarity=0.575 Sum_probs=19.9
Q ss_pred EEEECCCCCcHHHHHHHHhCCC
Q 002236 661 FGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
+-|.||.|+|||++.+.|+...
T Consensus 45 iLl~GppGtGKT~la~aia~~~ 66 (247)
T d1ixza_ 45 VLLVGPPGVGKTHLARAVAGEA 66 (247)
T ss_dssp EEEECCTTSSHHHHHHHHHHHT
T ss_pred EEEecCCCCChhHHHHHHHHHc
Confidence 5799999999999999999754
No 224
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}
Probab=76.56 E-value=0.9 Score=43.09 Aligned_cols=32 Identities=22% Similarity=0.327 Sum_probs=23.6
Q ss_pred eeeeeEEEEeCCcEEEEECCCCCcHHHHHHHHh
Q 002236 647 AVNGLSLALPSGECFGMLGPNGAGKTTFISMMI 679 (949)
Q Consensus 647 al~~lSl~v~~Gei~gLLG~NGAGKTTLlk~L~ 679 (949)
.++...+. -.|.-+.|.|++|+||||+.-.|.
T Consensus 5 ~~H~~~v~-~~g~gvli~G~sg~GKS~la~~l~ 36 (169)
T d1ko7a2 5 SLHGVLVD-VYGVGVLITGDSGIGKSETALELI 36 (169)
T ss_dssp EEESEEEE-ETTEEEEEEESTTSSHHHHHHHHH
T ss_pred eEEEEEEE-ECCEEEEEEeCCCCCHHHHHHHHH
Confidence 45554443 458899999999999999875543
No 225
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=75.76 E-value=0.64 Score=45.30 Aligned_cols=23 Identities=22% Similarity=0.418 Sum_probs=20.2
Q ss_pred EEEEECCCCCcHHHHHHHHhCCC
Q 002236 660 CFGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
.+++=|.=||||||+++.|.-.+
T Consensus 4 ~IviEG~~GsGKST~~~~L~~~l 26 (241)
T d2ocpa1 4 RLSIEGNIAVGKSTFVKLLTKTY 26 (241)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHC
T ss_pred EEEEECCCCCcHHHHHHHHHHHH
Confidence 67788999999999999998654
No 226
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=75.46 E-value=0.63 Score=46.72 Aligned_cols=22 Identities=32% Similarity=0.474 Sum_probs=19.9
Q ss_pred EEEECCCCCcHHHHHHHHhCCC
Q 002236 661 FGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
+-|.||.|+|||++.+.++...
T Consensus 41 iLL~GppGtGKT~l~~ala~~~ 62 (258)
T d1e32a2 41 ILLYGPPGTGKTLIARAVANET 62 (258)
T ss_dssp EEEECCTTSSHHHHHHHHHHHT
T ss_pred eEEecCCCCCchHHHHHHHHHh
Confidence 6789999999999999999854
No 227
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=75.18 E-value=0.74 Score=47.71 Aligned_cols=24 Identities=29% Similarity=0.434 Sum_probs=21.3
Q ss_pred cEEEEECCCCCcHHHHHHHHhCCC
Q 002236 659 ECFGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 659 ei~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
..+.++||.|+|||.|.+.|+-.+
T Consensus 53 ~~~lf~Gp~GvGKT~lak~la~~l 76 (315)
T d1r6bx3 53 GSFLFAGPTGVGKTEVTVQLSKAL 76 (315)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHH
T ss_pred eEEEEECCCcchhHHHHHHHHhhc
Confidence 368899999999999999999764
No 228
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=74.21 E-value=0.64 Score=45.71 Aligned_cols=21 Identities=33% Similarity=0.437 Sum_probs=18.4
Q ss_pred EEEEECCCCCcHHHHHHHHhC
Q 002236 660 CFGMLGPNGAGKTTFISMMIG 680 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~G 680 (949)
++.|-|.=|||||||++-|..
T Consensus 5 v~iitGFLGaGKTTll~~lL~ 25 (222)
T d1nija1 5 VTLLTGFLGAGKTTLLRHILN 25 (222)
T ss_dssp EEEEEESSSSSCHHHHHHHHH
T ss_pred EEEEeeCCCCCHHHHHHHHHh
Confidence 678889999999999988865
No 229
>d1zunb3 c.37.1.8 (B:16-237) Sulfate adenylate transferase subunit cysN/C, EF-Tu domain G-like domain {Pseudomonas syringae pv. tomato [TaxId: 323]}
Probab=73.23 E-value=0.93 Score=44.64 Aligned_cols=19 Identities=32% Similarity=0.490 Sum_probs=17.6
Q ss_pred EEEECCCCCcHHHHHHHHh
Q 002236 661 FGMLGPNGAGKTTFISMMI 679 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~ 679 (949)
++++||-.+|||||++.|.
T Consensus 12 i~viGHVd~GKSTL~~~Ll 30 (222)
T d1zunb3 12 FLTCGNVDDGKSTLIGRLL 30 (222)
T ss_dssp EEEECCTTSSHHHHHHHHH
T ss_pred EEEEcCCCCCHHHHHHHHH
Confidence 7889999999999999994
No 230
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=72.53 E-value=0.79 Score=48.62 Aligned_cols=30 Identities=23% Similarity=0.477 Sum_probs=26.3
Q ss_pred EEeCCcEEEEECCCCCcHHHHHHHHhCCCC
Q 002236 654 ALPSGECFGMLGPNGAGKTTFISMMIGITR 683 (949)
Q Consensus 654 ~v~~Gei~gLLG~NGAGKTTLlk~L~Gl~~ 683 (949)
.++++.++.+.||.|+||||+.+.|++.+.
T Consensus 150 ~~~~~~~~~~~g~~~~gk~~~~~~~~~~~~ 179 (362)
T d1svma_ 150 NIPKKRYWLFKGPIDSGKTTLAAALLELCG 179 (362)
T ss_dssp CCTTCCEEEEECSTTSSHHHHHHHHHHHHC
T ss_pred CCCCcCeEEEECCCCCCHHHHHHHHHHHcC
Confidence 346778999999999999999999998774
No 231
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=70.71 E-value=0.76 Score=50.11 Aligned_cols=24 Identities=29% Similarity=0.534 Sum_probs=21.3
Q ss_pred EEEEECCCCCcHHHHHHHHhCCCC
Q 002236 660 CFGMLGPNGAGKTTFISMMIGITR 683 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~Gl~~ 683 (949)
-+-|+||.|+|||-|.|.|++++.
T Consensus 51 NILliGPTGvGKTlLAr~LAk~l~ 74 (443)
T d1g41a_ 51 NILMIGPTGVGKTEIARRLAKLAN 74 (443)
T ss_dssp CEEEECCTTSSHHHHHHHHHHHTT
T ss_pred cEEEECCCCCCHHHHHHHHHHHhC
Confidence 467999999999999999999763
No 232
>d1fx0a3 c.37.1.11 (A:97-372) Central domain of alpha subunit of F1 ATP synthase {Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]}
Probab=69.97 E-value=0.8 Score=46.86 Aligned_cols=37 Identities=19% Similarity=0.312 Sum_probs=28.3
Q ss_pred ceeeeeEEEEeCCcEEEEECCCCCcHHHHHHHHhCCCC
Q 002236 646 VAVNGLSLALPSGECFGMLGPNGAGKTTFISMMIGITR 683 (949)
Q Consensus 646 ~al~~lSl~v~~Gei~gLLG~NGAGKTTLlk~L~Gl~~ 683 (949)
+++|.+ +.+-+|+..+|+|+.|+|||+|+..+.--..
T Consensus 56 ~~ID~l-~pig~GQr~~Ifg~~g~GKt~l~~~~~~~~~ 92 (276)
T d1fx0a3 56 IAIDAM-IPVGRGQRELIIGDRQTGKTAVATDTILNQQ 92 (276)
T ss_dssp TTTTTT-SCCBTTCBCBEEESSSSSHHHHHHHHHHTCC
T ss_pred eEEecc-ccccCCceEeeccCCCCChHHHHHHHHhhhc
Confidence 344433 6888999999999999999999976544333
No 233
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=69.41 E-value=0.97 Score=47.96 Aligned_cols=44 Identities=11% Similarity=0.217 Sum_probs=28.9
Q ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEcCCHHHHHHh
Q 002236 784 PKVVYMDEPSTGLDPASRNNLWNVVKRAK-QGRAIILTTHSMEEAEAL 830 (949)
Q Consensus 784 P~vllLDEPTsGLDp~sr~~l~~~L~~~~-~g~tIIltTH~meeae~l 830 (949)
|-++++||--.-... ..+-+++.+.+ .|..+++++++++.++..
T Consensus 277 ~v~l~lDE~~~~~~~---~~l~~~l~~~Rk~Gv~~~l~~Qs~~ql~~~ 321 (433)
T d1e9ra_ 277 RLWLFIDELASLEKL---ASLADALTKGRKAGLRVVAGLQSTSQLDDV 321 (433)
T ss_dssp CEEEEESCGGGSCBC---SSHHHHHHHCTTTTEEEEEEESCHHHHHHH
T ss_pred ceEEEechHhhhccc---HHHHHHHHHhCCCCceEEEEeccHHHHHHH
Confidence 336888996443221 12556666654 589999999998877543
No 234
>d2olra1 c.91.1.1 (A:228-540) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Escherichia coli [TaxId: 562]}
Probab=68.42 E-value=1.1 Score=46.60 Aligned_cols=20 Identities=35% Similarity=0.572 Sum_probs=17.6
Q ss_pred eCCcEEEEECCCCCcHHHHH
Q 002236 656 PSGECFGMLGPNGAGKTTFI 675 (949)
Q Consensus 656 ~~Gei~gLLG~NGAGKTTLl 675 (949)
++|++..+.|.+|+|||||=
T Consensus 12 ~~~~~alfFGLSGTGKTTLs 31 (313)
T d2olra1 12 EKGDVAVFFGLSGTGKTTLS 31 (313)
T ss_dssp TTSCEEEEECSTTSSHHHHH
T ss_pred CCCCEEEEEccCCCCcccce
Confidence 46899999999999999954
No 235
>d1r5ba3 c.37.1.8 (A:215-459) Eukaryotic peptide chain release factor ERF2, G domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=67.09 E-value=1 Score=44.85 Aligned_cols=18 Identities=28% Similarity=0.370 Sum_probs=17.0
Q ss_pred EEEECCCCCcHHHHHHHH
Q 002236 661 FGMLGPNGAGKTTFISMM 678 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L 678 (949)
++++||-++|||||+..|
T Consensus 27 i~iiGHVD~GKSTL~~~L 44 (245)
T d1r5ba3 27 IVFIGHVDAGKSTLGGNI 44 (245)
T ss_dssp EEEEECGGGTHHHHHHHH
T ss_pred EEEEeeCCCCHHHHHHHH
Confidence 689999999999999888
No 236
>d1j3ba1 c.91.1.1 (A:212-529) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Thermus thermophilus [TaxId: 274]}
Probab=67.07 E-value=1.1 Score=46.58 Aligned_cols=19 Identities=37% Similarity=0.613 Sum_probs=16.9
Q ss_pred CCcEEEEECCCCCcHHHHH
Q 002236 657 SGECFGMLGPNGAGKTTFI 675 (949)
Q Consensus 657 ~Gei~gLLG~NGAGKTTLl 675 (949)
+|++..+.|.+|.|||||-
T Consensus 13 ~~~valffGLSGTGKTTLs 31 (318)
T d1j3ba1 13 EGDVAVFFGLSGTGKTTLS 31 (318)
T ss_dssp TCCEEEEEECTTSCHHHHT
T ss_pred CCCEEEEEccCCCCccccc
Confidence 5899999999999999953
No 237
>d1f60a3 c.37.1.8 (A:2-240) Elongation factor eEF-1alpha, N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=66.30 E-value=1.3 Score=44.03 Aligned_cols=19 Identities=26% Similarity=0.398 Sum_probs=17.1
Q ss_pred EEEECCCCCcHHHHHHHHh
Q 002236 661 FGMLGPNGAGKTTFISMMI 679 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~ 679 (949)
++++||-++|||||..-|.
T Consensus 9 i~iiGHvD~GKsTl~~~ll 27 (239)
T d1f60a3 9 VVVIGHVDSGKSTTTGHLI 27 (239)
T ss_dssp EEEEECTTSCHHHHHHHHH
T ss_pred EEEEeCCCCCHHHHHHHHH
Confidence 6899999999999998774
No 238
>d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=65.75 E-value=0.71 Score=48.66 Aligned_cols=23 Identities=22% Similarity=0.421 Sum_probs=20.1
Q ss_pred EEEECCCCCcHHHHHHHH---hCCCC
Q 002236 661 FGMLGPNGAGKTTFISMM---IGITR 683 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L---~Gl~~ 683 (949)
+||+||-|+|||||+..| +|.+.
T Consensus 20 I~iiGhvd~GKTTL~d~Ll~~~g~i~ 45 (341)
T d1n0ua2 20 MSVIAHVDHGKSTLTDSLVQRAGIIS 45 (341)
T ss_dssp EEEECCGGGTHHHHHHHHHHHHBCCB
T ss_pred EEEEeCCCCcHHHHHHHHHHHCCCcc
Confidence 789999999999999998 56654
No 239
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]}
Probab=64.46 E-value=1.7 Score=49.89 Aligned_cols=25 Identities=28% Similarity=0.502 Sum_probs=21.9
Q ss_pred CCcEEEEECCCCCcHHHHHHHHhCC
Q 002236 657 SGECFGMLGPNGAGKTTFISMMIGI 681 (949)
Q Consensus 657 ~Gei~gLLG~NGAGKTTLlk~L~Gl 681 (949)
+.|++.+.|.+|||||+..|+|.-.
T Consensus 85 ~~QsIiisGeSGsGKTe~~k~il~y 109 (684)
T d1lkxa_ 85 ENQCVIISGESGAGKTEASKKIMQF 109 (684)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHH
T ss_pred CCeEEEEEcCCCCCHHHHHHHHHHH
Confidence 5689999999999999999988553
No 240
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4 [TaxId: 10331]}
Probab=64.15 E-value=2.3 Score=44.45 Aligned_cols=30 Identities=30% Similarity=0.274 Sum_probs=23.6
Q ss_pred EEEECCCCCcHHHHHHHHhCCCCCCcceEE
Q 002236 661 FGMLGPNGAGKTTFISMMIGITRTTSGTAY 690 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl~~ptsG~I~ 690 (949)
+.|=|+=|+||||+++.|..-+....+.+.
T Consensus 9 I~iEG~iGsGKSTl~~~L~~~l~~~~~v~~ 38 (333)
T d1p6xa_ 9 IYLDGVYGIGKSTTGRVMASAASGGSPTLY 38 (333)
T ss_dssp EEEECSTTSSHHHHHHHHHSGGGCSSCEEE
T ss_pred EEEECCccCCHHHHHHHHHHHhccCCCeEE
Confidence 567799999999999999998765444433
No 241
>d1ii2a1 c.91.1.1 (A:201-523) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Trypanosoma cruzi [TaxId: 5693]}
Probab=63.49 E-value=1.6 Score=45.49 Aligned_cols=19 Identities=37% Similarity=0.614 Sum_probs=17.4
Q ss_pred CCcEEEEECCCCCcHHHHH
Q 002236 657 SGECFGMLGPNGAGKTTFI 675 (949)
Q Consensus 657 ~Gei~gLLG~NGAGKTTLl 675 (949)
.|++..+.|-+|.|||||-
T Consensus 13 ~gd~alfFGLSGTGKTTLs 31 (323)
T d1ii2a1 13 QGDVTVFFGLSGTGKTTLS 31 (323)
T ss_dssp TCCEEEEECCTTSSHHHHH
T ss_pred CCCEEEEEccCCCCcccce
Confidence 6889999999999999976
No 242
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=63.33 E-value=0.8 Score=39.88 Aligned_cols=21 Identities=33% Similarity=0.202 Sum_probs=17.9
Q ss_pred EeCCcEEEEECCCCCcHHHHH
Q 002236 655 LPSGECFGMLGPNGAGKTTFI 675 (949)
Q Consensus 655 v~~Gei~gLLG~NGAGKTTLl 675 (949)
+++|+.+.|.+|-|||||+..
T Consensus 4 l~~~~~~il~~~tGsGKT~~~ 24 (140)
T d1yksa1 4 LKKGMTTVLDFHPGAGKTRRF 24 (140)
T ss_dssp TSTTCEEEECCCTTSSTTTTH
T ss_pred HHcCCcEEEEcCCCCChhHHH
Confidence 467999999999999999554
No 243
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=62.79 E-value=1.8 Score=44.74 Aligned_cols=23 Identities=35% Similarity=0.626 Sum_probs=20.6
Q ss_pred EEEEECCCCCcHHHHHHHHhCCC
Q 002236 660 CFGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
.+.++||+|+|||.+.+.|+-.+
T Consensus 55 ~~lf~Gp~G~GKt~lak~la~~l 77 (315)
T d1qvra3 55 SFLFLGPTGVGKTELAKTLAATL 77 (315)
T ss_dssp EEEEBSCSSSSHHHHHHHHHHHH
T ss_pred EEEEECCCcchHHHHHHHHHHHh
Confidence 57789999999999999998765
No 244
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=62.60 E-value=1.8 Score=49.78 Aligned_cols=26 Identities=27% Similarity=0.287 Sum_probs=22.4
Q ss_pred CCcEEEEECCCCCcHHHHHHHHhCCC
Q 002236 657 SGECFGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 657 ~Gei~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
+.|++.+.|.+|||||+..|+|...+
T Consensus 90 ~~Q~IiisGeSGaGKTe~~k~il~yL 115 (710)
T d1br2a2 90 EDQSILCTGESGAGKTENTKKVIQYL 115 (710)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCcEEEEEeCCCCCHHHHHHHHHHHH
Confidence 46899999999999999998886543
No 245
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=62.45 E-value=1.8 Score=49.76 Aligned_cols=27 Identities=26% Similarity=0.324 Sum_probs=23.5
Q ss_pred eCCcEEEEECCCCCcHHHHHHHHhCCC
Q 002236 656 PSGECFGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 656 ~~Gei~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
++.|++.+.|.+|||||+..|+|...+
T Consensus 123 ~~nQsIiisGeSGaGKTe~~k~il~yL 149 (712)
T d1d0xa2 123 RQNQSLLITGESGAGKTENTKKVIQYL 149 (712)
T ss_dssp TCCEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCCceEEEeCCCCCCHHHHHHHHHHHH
Confidence 457899999999999999999987644
No 246
>d2jdia3 c.37.1.11 (A:95-379) Central domain of alpha subunit of F1 ATP synthase {Cow (Bos taurus) [TaxId: 9913]}
Probab=60.75 E-value=1.4 Score=45.24 Aligned_cols=33 Identities=24% Similarity=0.296 Sum_probs=26.1
Q ss_pred ceeeeeEEEEeCCcEEEEECCCCCcHHHHHHHHh
Q 002236 646 VAVNGLSLALPSGECFGMLGPNGAGKTTFISMMI 679 (949)
Q Consensus 646 ~al~~lSl~v~~Gei~gLLG~NGAGKTTLlk~L~ 679 (949)
+++|- =+.+-+||..+|+|+.|+||||++..+.
T Consensus 57 raID~-l~pig~GQr~~If~~~g~GKt~ll~~~~ 89 (285)
T d2jdia3 57 KAVDS-LVPIGRGQRELIIGDRQTGKTSIAIDTI 89 (285)
T ss_dssp HHHHH-HSCCBTTCBCEEEESTTSSHHHHHHHHH
T ss_pred eEEec-ccCccCCCEEEeecCCCCChHHHHHHHH
Confidence 34433 3688899999999999999999976443
No 247
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=59.85 E-value=1.9 Score=42.89 Aligned_cols=16 Identities=38% Similarity=0.414 Sum_probs=13.7
Q ss_pred EEEEECCCCCcHHHHH
Q 002236 660 CFGMLGPNGAGKTTFI 675 (949)
Q Consensus 660 i~gLLG~NGAGKTTLl 675 (949)
-+.|+|+-|+||||++
T Consensus 16 ~~lI~g~aGTGKTt~l 31 (306)
T d1uaaa1 16 PCLVLAGAGSGKTRVI 31 (306)
T ss_dssp EEEECCCTTSCHHHHH
T ss_pred CEEEEeeCCccHHHHH
Confidence 4678899999999875
No 248
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=59.40 E-value=1.7 Score=43.77 Aligned_cols=16 Identities=25% Similarity=0.441 Sum_probs=13.6
Q ss_pred EEEEECCCCCcHHHHH
Q 002236 660 CFGMLGPNGAGKTTFI 675 (949)
Q Consensus 660 i~gLLG~NGAGKTTLl 675 (949)
.+.|.|+-|+||||++
T Consensus 26 ~~lV~g~aGSGKTt~l 41 (318)
T d1pjra1 26 PLLIMAGAGSGKTRVL 41 (318)
T ss_dssp CEEEEECTTSCHHHHH
T ss_pred CEEEEecCCccHHHHH
Confidence 3668899999999876
No 249
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=59.04 E-value=2.3 Score=41.28 Aligned_cols=68 Identities=13% Similarity=0.268 Sum_probs=48.3
Q ss_pred cCCCcEEEEeCCCC-CCCHHHHHHHHHHHHHh-cCCcEEEEEcCCHHHHHHhcCEEEEEeCCEEEEEcCHHHHHHhcCCc
Q 002236 781 IGNPKVVYMDEPST-GLDPASRNNLWNVVKRA-KQGRAIILTTHSMEEAEALCDRLGIFVDGSLQCIGNPKELKARYGGS 858 (949)
Q Consensus 781 i~~P~vllLDEPTs-GLDp~sr~~l~~~L~~~-~~g~tIIltTH~meeae~l~drI~Im~~G~l~~~Gs~~~Lk~~~g~~ 858 (949)
+.+.++|++|+-=. .-++..+..+..++... ..|+.||+||...-+. + .+-.++|++|...+
T Consensus 95 ~~~~dll~iDDi~~i~~~~~~~~~lf~lin~~~~~~~~iiits~~~p~~--l--------------~~~~~dL~SRL~~g 158 (213)
T d1l8qa2 95 YKSVDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQIILASDRHPQK--L--------------DGVSDRLVSRFEGG 158 (213)
T ss_dssp HHTCSEEEEECGGGGTTCHHHHHHHHHHHHHHHHTTCEEEEEESSCGGG--C--------------TTSCHHHHHHHHTS
T ss_pred HhhccchhhhhhhhhcCchHHHHHHHHHHHHHhhccceEEEecCCcchh--c--------------cccchHHHHHhhCc
Confidence 44689999998632 23577888899999875 5688888888753221 1 12347899999998
Q ss_pred EEEEEE
Q 002236 859 YVFTMT 864 (949)
Q Consensus 859 y~l~i~ 864 (949)
..+.+.
T Consensus 159 ~~~~i~ 164 (213)
T d1l8qa2 159 ILVEIE 164 (213)
T ss_dssp EEEECC
T ss_pred eEEEEC
Confidence 888773
No 250
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=57.56 E-value=2.3 Score=49.45 Aligned_cols=27 Identities=26% Similarity=0.298 Sum_probs=22.8
Q ss_pred eCCcEEEEECCCCCcHHHHHHHHhCCC
Q 002236 656 PSGECFGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 656 ~~Gei~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
.+.|++.+.|.+|||||+..|+|...+
T Consensus 121 ~~~QsIiisGeSGaGKTe~~K~il~yL 147 (794)
T d2mysa2 121 RENQSILITGESGAGKTVNTKRVIQYF 147 (794)
T ss_dssp TCCEEEEEEECTTSCHHHHHHHHHHHH
T ss_pred CCCcEEEEEcCCCCCHHHHHHHHHHHH
Confidence 457899999999999999998877544
No 251
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain {Adeno-associated virus 2, AAV2 [TaxId: 10804]}
Probab=56.94 E-value=2.4 Score=42.81 Aligned_cols=31 Identities=19% Similarity=0.301 Sum_probs=25.6
Q ss_pred eCCcEEEEECCCCCcHHHHHHHHhCCCCCCcc
Q 002236 656 PSGECFGMLGPNGAGKTTFISMMIGITRTTSG 687 (949)
Q Consensus 656 ~~Gei~gLLG~NGAGKTTLlk~L~Gl~~ptsG 687 (949)
++--++.|.||-++||||+++.|+.++ ++.|
T Consensus 102 ~k~n~~~l~G~~~tGKS~f~~~i~~~l-g~~~ 132 (267)
T d1u0ja_ 102 GKRNTIWLFGPATTGKTNIAEAIAHTV-PFYG 132 (267)
T ss_dssp TTCCEEEEECSTTSSHHHHHHHHHHHS-SCEE
T ss_pred CccEEEEEEcCCCCCHHHHHHHHHHHh-cchh
Confidence 345589999999999999999999987 4443
No 252
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus [TaxId: 10335]}
Probab=56.50 E-value=2.4 Score=44.22 Aligned_cols=32 Identities=22% Similarity=0.175 Sum_probs=24.8
Q ss_pred EEEECCCCCcHHHHHHHHhCCCCCCcceEEEc
Q 002236 661 FGMLGPNGAGKTTFISMMIGITRTTSGTAYVQ 692 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl~~ptsG~I~i~ 692 (949)
+.|=|+=||||||+++.|.-.+......+.+-
T Consensus 8 I~IEG~iGsGKSTl~~~L~~~l~~~g~~v~~~ 39 (331)
T d1osna_ 8 IYLDGAYGIGKTTAAEEFLHHFAITPNRILLI 39 (331)
T ss_dssp EEEEESSSSCTTHHHHHHHHTTTTSGGGEEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHHhhcCCceEEE
Confidence 66779999999999999998776544444443
No 253
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=55.73 E-value=2.1 Score=44.52 Aligned_cols=29 Identities=21% Similarity=0.249 Sum_probs=22.9
Q ss_pred EEEeCCcEEEEECCCCCcHHHHHHHHhCCC
Q 002236 653 LALPSGECFGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 653 l~v~~Gei~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
...++| +..+.||.|+|||.+.+.|++..
T Consensus 119 ~~~~~g-~~l~~G~pG~GKT~la~ala~~~ 147 (321)
T d1w44a_ 119 HRYASG-MVIVTGKGNSGKTPLVHALGEAL 147 (321)
T ss_dssp EEEESE-EEEEECSSSSCHHHHHHHHHHHH
T ss_pred cccCCc-eEEEECCCCccHHHHHHHHHHHh
Confidence 445555 55567999999999999999864
No 254
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=54.97 E-value=2.8 Score=44.13 Aligned_cols=22 Identities=27% Similarity=0.507 Sum_probs=19.8
Q ss_pred EEEECCCCCcHHHHHHHHhCCC
Q 002236 661 FGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
+-++||.|+|||-+.|.|+-+.
T Consensus 71 iLfiGPTGvGKTElAk~LA~~~ 92 (364)
T d1um8a_ 71 ILLIGPTGSGKTLMAQTLAKHL 92 (364)
T ss_dssp EEEECCTTSSHHHHHHHHHHHT
T ss_pred eeeeCCCCccHHHHHHHHHhhc
Confidence 6688999999999999999764
No 255
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type 1, different strains [TaxId: 10298]}
Probab=54.86 E-value=2.7 Score=43.73 Aligned_cols=23 Identities=30% Similarity=0.563 Sum_probs=18.4
Q ss_pred EEEECCCCCcHHHHHHHHhCCCC
Q 002236 661 FGMLGPNGAGKTTFISMMIGITR 683 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl~~ 683 (949)
+.|=|+=|+||||+++.|...+.
T Consensus 7 I~IEG~iGsGKTTl~~~La~~l~ 29 (329)
T d1e2ka_ 7 VYIDGPHGMGKTTTTQLLVALGS 29 (329)
T ss_dssp EEECSCTTSSHHHHHHHHTC---
T ss_pred EEEECCcCCCHHHHHHHHHHHhC
Confidence 67789999999999999987653
No 256
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=54.36 E-value=3.2 Score=40.05 Aligned_cols=21 Identities=24% Similarity=0.362 Sum_probs=18.0
Q ss_pred EEEECCCCCcHHHHHHHHhCC
Q 002236 661 FGMLGPNGAGKTTFISMMIGI 681 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl 681 (949)
..|+|+.|.|||+++.-|+-.
T Consensus 46 ~lLvG~pGVGKTalv~~LA~r 66 (195)
T d1jbka_ 46 PVLIGEPGVGKTAIVEGLAQR 66 (195)
T ss_dssp EEEECCTTSCHHHHHHHHHHH
T ss_pred eEEEecCCcccHHHHHHHHHH
Confidence 469999999999999877753
No 257
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=54.19 E-value=2.2 Score=37.64 Aligned_cols=33 Identities=21% Similarity=0.203 Sum_probs=23.6
Q ss_pred HHcCCCcEEEEeCCCCCCCHHHHHHHHHHHHHhc
Q 002236 779 SLIGNPKVVYMDEPSTGLDPASRNNLWNVVKRAK 812 (949)
Q Consensus 779 ALi~~P~vllLDEPTsGLDp~sr~~l~~~L~~~~ 812 (949)
....+-+++|+||-=. +|..+...+..+++..+
T Consensus 90 ~~~~~~~~vIiDE~H~-~~~~~~~~~~~~l~~~~ 122 (136)
T d1a1va1 90 CSGGAYDIIICDECHS-TDATSILGIGTVLDQAE 122 (136)
T ss_dssp GGGCCCSEEEEETTTC-CSHHHHHHHHHHHHHTT
T ss_pred hhhhcCCEEEEecccc-cCHHHHHHHHHHHHHHH
Confidence 3456789999999853 67777666666666554
No 258
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=53.55 E-value=3.2 Score=41.94 Aligned_cols=21 Identities=24% Similarity=0.248 Sum_probs=18.0
Q ss_pred EEEECCCCCcHHHHHHHHhCC
Q 002236 661 FGMLGPNGAGKTTFISMMIGI 681 (949)
Q Consensus 661 ~gLLG~NGAGKTTLlk~L~Gl 681 (949)
..|+|+.|.|||+++.-|+-.
T Consensus 42 ~lLVG~~GvGKTalv~~la~r 62 (268)
T d1r6bx2 42 PLLVGESGVGKTAIAEGLAWR 62 (268)
T ss_dssp EEEECCTTSSHHHHHHHHHHH
T ss_pred cEEECCCCCcHHHHHHHHHHH
Confidence 469999999999999877754
No 259
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=53.53 E-value=2.7 Score=48.81 Aligned_cols=27 Identities=26% Similarity=0.258 Sum_probs=22.1
Q ss_pred eCCcEEEEECCCCCcHHHHHHHHhCCC
Q 002236 656 PSGECFGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 656 ~~Gei~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
++.|++.|.|.+|||||...|+|...+
T Consensus 119 ~~nQ~IiisGESGaGKTe~~K~il~yL 145 (789)
T d1kk8a2 119 RENQSCLITGESGAGKTENTKKVIMYL 145 (789)
T ss_dssp TSEEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCCCHHHHHHHHHHHH
Confidence 356899999999999999977766543
No 260
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus type 2 [TaxId: 11060]}
Probab=52.14 E-value=2.2 Score=42.35 Aligned_cols=25 Identities=24% Similarity=0.064 Sum_probs=19.6
Q ss_pred EeCCcEEEEECCCCCcHHHH--HHHHh
Q 002236 655 LPSGECFGMLGPNGAGKTTF--ISMMI 679 (949)
Q Consensus 655 v~~Gei~gLLG~NGAGKTTL--lk~L~ 679 (949)
+.+|+.+.+.+|.|||||+. ..++.
T Consensus 6 ~~~~~~~lv~~~TGsGKT~~~l~~~~~ 32 (305)
T d2bmfa2 6 FRKKRLTIMDLHPGAGKTKRYLPAIVR 32 (305)
T ss_dssp SSTTCEEEECCCTTSSTTTTHHHHHHH
T ss_pred hhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 45789999999999999973 34443
No 261
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]}
Probab=51.95 E-value=5 Score=42.01 Aligned_cols=20 Identities=30% Similarity=0.371 Sum_probs=17.3
Q ss_pred CCcEEEEECCCCCcHHHHHH
Q 002236 657 SGECFGMLGPNGAGKTTFIS 676 (949)
Q Consensus 657 ~Gei~gLLG~NGAGKTTLlk 676 (949)
.+.++.|.|+-|+||||++.
T Consensus 162 ~~~~~vI~G~pGTGKTt~i~ 181 (359)
T d1w36d1 162 TRRISVISGGPGTGKTTTVA 181 (359)
T ss_dssp TBSEEEEECCTTSTHHHHHH
T ss_pred cCCeEEEEcCCCCCceehHH
Confidence 35689999999999999874
No 262
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}
Probab=51.25 E-value=3.6 Score=47.26 Aligned_cols=26 Identities=23% Similarity=0.264 Sum_probs=22.6
Q ss_pred CCcEEEEECCCCCcHHHHHHHHhCCC
Q 002236 657 SGECFGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 657 ~Gei~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
+.+++.+.|.+|||||+..|.+...+
T Consensus 93 ~~Q~IiisGeSGsGKTe~~k~il~~l 118 (730)
T d1w7ja2 93 RNQSIIVSGESGAGKTVSAKYAMRYF 118 (730)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHH
Confidence 57899999999999999999887644
No 263
>d1puja_ c.37.1.8 (A:) Probable GTPase YlqF {Bacillus subtilis [TaxId: 1423]}
Probab=48.39 E-value=5.4 Score=39.77 Aligned_cols=26 Identities=19% Similarity=0.215 Sum_probs=22.3
Q ss_pred EEEEECCCCCcHHHHHHHHhCCCCCC
Q 002236 660 CFGMLGPNGAGKTTFISMMIGITRTT 685 (949)
Q Consensus 660 i~gLLG~NGAGKTTLlk~L~Gl~~pt 685 (949)
.++++|..-+|||||+|.|.|-....
T Consensus 114 ~v~vvG~PNvGKSsliN~L~~~~~~~ 139 (273)
T d1puja_ 114 RALIIGIPNVGKSTLINRLAKKNIAK 139 (273)
T ss_dssp EEEEEESTTSSHHHHHHHHHTSCCC-
T ss_pred EEEEEecCccchhhhhhhhhccceEE
Confidence 48999999999999999999965543
No 264
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=45.92 E-value=2.4 Score=41.20 Aligned_cols=23 Identities=39% Similarity=0.569 Sum_probs=18.4
Q ss_pred CCcEEEEECCCCCcHHHHHHHHh
Q 002236 657 SGECFGMLGPNGAGKTTFISMMI 679 (949)
Q Consensus 657 ~Gei~gLLG~NGAGKTTLlk~L~ 679 (949)
+|+-+.+++|.|+|||+..-+.+
T Consensus 57 ~g~~~~i~apTGsGKT~~~~~~~ 79 (237)
T d1gkub1 57 RKESFAATAPTGVGKTSFGLAMS 79 (237)
T ss_dssp TTCCEECCCCBTSCSHHHHHHHH
T ss_pred CCCCEEEEecCCChHHHHHHHHH
Confidence 68888899999999998654433
No 265
>d2b8ta1 c.37.1.24 (A:11-149) Thymidine kinase, TK1, N-terminal domain {Ureaplasma urealyticum [TaxId: 2130]}
Probab=44.42 E-value=6.4 Score=35.54 Aligned_cols=23 Identities=35% Similarity=0.279 Sum_probs=19.1
Q ss_pred CcEEEEECCCCCcHHH-HHHHHhC
Q 002236 658 GECFGMLGPNGAGKTT-FISMMIG 680 (949)
Q Consensus 658 Gei~gLLG~NGAGKTT-Llk~L~G 680 (949)
|.+..++||=.||||| |++.+-.
T Consensus 2 G~L~~i~GpMfsGKTteLi~~~~~ 25 (139)
T d2b8ta1 2 GWIEFITGPMFAGKTAELIRRLHR 25 (139)
T ss_dssp CEEEEEECSTTSCHHHHHHHHHHH
T ss_pred cEEEEEEccccCHHHHHHHHHHHH
Confidence 6788899999999999 6676644
No 266
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]}
Probab=41.42 E-value=4.2 Score=39.44 Aligned_cols=27 Identities=30% Similarity=0.573 Sum_probs=23.9
Q ss_pred eCCcEEEEECCCCCcHHHHHHHHhCCC
Q 002236 656 PSGECFGMLGPNGAGKTTFISMMIGIT 682 (949)
Q Consensus 656 ~~Gei~gLLG~NGAGKTTLlk~L~Gl~ 682 (949)
++--|+.|.||-++|||++...|+.++
T Consensus 51 PKkn~i~~~GP~~TGKS~f~~sl~~~l 77 (205)
T d1tuea_ 51 PKKNCLVFCGPANTGKSYFGMSFIHFI 77 (205)
T ss_dssp TTCSEEEEESCGGGCHHHHHHHHHHHH
T ss_pred CCceEEEEECCCCccHHHHHHHHHHHh
Confidence 445699999999999999999998886
No 267
>d1g5ta_ c.37.1.11 (A:) ATP:corrinoid adenosyltransferase CobA {Salmonella typhimurium [TaxId: 90371]}
Probab=38.77 E-value=6.2 Score=36.60 Aligned_cols=58 Identities=12% Similarity=0.114 Sum_probs=44.8
Q ss_pred CCCcEEEEeCCCCCCC--HHHHHHHHHHHHHhcCCcEEEEEcCCH-HHHHHhcCEEEEEeC
Q 002236 782 GNPKVVYMDEPSTGLD--PASRNNLWNVVKRAKQGRAIILTTHSM-EEAEALCDRLGIFVD 839 (949)
Q Consensus 782 ~~P~vllLDEPTsGLD--p~sr~~l~~~L~~~~~g~tIIltTH~m-eeae~l~drI~Im~~ 839 (949)
++.++|+|||-...++ -.....+.++|++..++.-+|+|-+++ ++..++||.|.-|..
T Consensus 93 ~~~dllILDEi~~Ai~~gli~~~~v~~ll~~rp~~~evVlTGr~~p~~L~e~ADlVTEm~~ 153 (157)
T d1g5ta_ 93 PLLDMVVLDELTYMVAYDYLPLEEVISALNARPGHQTVIITGRGCHRDILDLADTVSELRP 153 (157)
T ss_dssp TTCSEEEEETHHHHHHTTSSCHHHHHHHHHTSCTTCEEEEECSSCCHHHHHHCSEEEECCC
T ss_pred CccCEEeHHHHHHHHHcCCCCHHHHHHHHHhCCCCCEEEEECCCCCHHHHHhcceeeeeee
Confidence 4579999999876543 345667888887656688999999976 578888999987753
No 268
>d1gg4a4 c.72.2.1 (A:99-312) UDP-murNac-tripeptide D-alanyl-D-alanine-adding enzyme MurF {Escherichia coli [TaxId: 562]}
Probab=37.38 E-value=7.8 Score=35.99 Aligned_cols=27 Identities=22% Similarity=0.356 Sum_probs=23.2
Q ss_pred CCcEEEEECCCCCcHHHHHHHHhCCCCCC
Q 002236 657 SGECFGMLGPNGAGKTTFISMMIGITRTT 685 (949)
Q Consensus 657 ~Gei~gLLG~NGAGKTTLlk~L~Gl~~pt 685 (949)
|+.++|+-|-| ||||+-.||.-+++-.
T Consensus 1 p~kvI~VTGTn--GKTTt~~mi~~iL~~~ 27 (214)
T d1gg4a4 1 PARVVALTGSS--GKTSVKEMTAAILSQC 27 (214)
T ss_dssp CCEEEEEECSS--CHHHHHHHHHHHHTTT
T ss_pred CCCEEEEeCCC--cHHHHHHHHHHHHHhC
Confidence 56899999999 5999999999988743
No 269
>d1xbta1 c.37.1.24 (A:18-150) Thymidine kinase, TK1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.98 E-value=8.9 Score=34.22 Aligned_cols=20 Identities=35% Similarity=0.448 Sum_probs=17.6
Q ss_pred CCcEEEEECCCCCcHHHHHH
Q 002236 657 SGECFGMLGPNGAGKTTFIS 676 (949)
Q Consensus 657 ~Gei~gLLG~NGAGKTTLlk 676 (949)
+|.+..++||=.|||||-|=
T Consensus 1 ~G~L~li~GpMfsGKTt~Li 20 (133)
T d1xbta1 1 RGQIQVILGPMFSGKSTELM 20 (133)
T ss_dssp CCEEEEEECCTTSCHHHHHH
T ss_pred CcEEEEEEecccCHHHHHHH
Confidence 58899999999999999653
No 270
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=34.16 E-value=8.1 Score=40.82 Aligned_cols=18 Identities=28% Similarity=0.554 Sum_probs=15.2
Q ss_pred EEECCCCCcHHHHHHHHh
Q 002236 662 GMLGPNGAGKTTFISMMI 679 (949)
Q Consensus 662 gLLG~NGAGKTTLlk~L~ 679 (949)
.|+|+.|.|||+++.-|+
T Consensus 47 llvG~~GvGKtaiv~~la 64 (387)
T d1qvra2 47 VLIGEPGVGKTAIVEGLA 64 (387)
T ss_dssp EEEECTTSCHHHHHHHHH
T ss_pred eEECCCCCCHHHHHHHHH
Confidence 589999999999986544
No 271
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=33.20 E-value=11 Score=36.94 Aligned_cols=27 Identities=19% Similarity=0.364 Sum_probs=23.2
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHHH
Q 002236 783 NPKVVYMDEPSTGLDPASRNNLWNVVKR 810 (949)
Q Consensus 783 ~P~vllLDEPTsGLDp~sr~~l~~~L~~ 810 (949)
+--.|++||. ..||+..+..+.+.|+.
T Consensus 94 ~gGtL~l~~i-~~L~~~~Q~~L~~~l~~ 120 (247)
T d1ny5a2 94 DGGTLFLDEI-GELSLEAQAKLLRVIES 120 (247)
T ss_dssp TTSEEEEESG-GGCCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCh-HhCCHHHHHHHHHHHHh
Confidence 4568999998 67899999999999976
No 272
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=32.10 E-value=5.7 Score=37.29 Aligned_cols=19 Identities=37% Similarity=0.476 Sum_probs=15.5
Q ss_pred CCcEEEEECCCCCcHHHHH
Q 002236 657 SGECFGMLGPNGAGKTTFI 675 (949)
Q Consensus 657 ~Gei~gLLG~NGAGKTTLl 675 (949)
+|+-+.+.+|.|+|||+..
T Consensus 39 ~~~~~il~apTGsGKT~~a 57 (202)
T d2p6ra3 39 SGKNLLLAMPTAAGKTLLA 57 (202)
T ss_dssp TCSCEEEECSSHHHHHHHH
T ss_pred cCCCEEEEcCCCCchhHHH
Confidence 4666779999999999863
No 273
>d1g8fa3 c.37.1.15 (A:390-511) ATP sulfurylase C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=31.48 E-value=13 Score=32.90 Aligned_cols=35 Identities=6% Similarity=-0.049 Sum_probs=25.2
Q ss_pred eCCcEEEEECCCCCcHHHHHHHH-hCCCCCCcc-eEE
Q 002236 656 PSGECFGMLGPNGAGKTTFISMM-IGITRTTSG-TAY 690 (949)
Q Consensus 656 ~~Gei~gLLG~NGAGKTTLlk~L-~Gl~~ptsG-~I~ 690 (949)
++|=.+-+-|-+||||+|+-+.| .-+..-..| .|.
T Consensus 4 kqgf~i~~tg~~~~gk~~ia~al~~~l~q~~G~R~vt 40 (122)
T d1g8fa3 4 KQGFSIVLGNSLTVSREQLSIALLSTFLQFGGGRYYK 40 (122)
T ss_dssp GCCEEEEECTTCCSCHHHHHHHHHHHHTTSCSCCCEE
T ss_pred ccceEEEEeCCCCCCHHHHHHHHHHHHHHhcCCcceE
Confidence 35667888999999999999988 445544333 344
No 274
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=28.53 E-value=12 Score=34.30 Aligned_cols=18 Identities=33% Similarity=0.460 Sum_probs=13.4
Q ss_pred EEECCCCCcHHHHHHHHh
Q 002236 662 GMLGPNGAGKTTFISMMI 679 (949)
Q Consensus 662 gLLG~NGAGKTTLlk~L~ 679 (949)
-+.+|.|+|||...-+++
T Consensus 27 lv~~pTGsGKT~i~~~~~ 44 (200)
T d1wp9a1 27 LIVLPTGLGKTLIAMMIA 44 (200)
T ss_dssp EEECCTTSCHHHHHHHHH
T ss_pred EEEeCCCCcHHHHHHHHH
Confidence 377999999997654444
No 275
>d2vgna3 d.79.3.2 (A:278-381) Dom34 {Saccharomyces cerevisiae [TaxId: 4932]}
Probab=25.08 E-value=35 Score=28.95 Aligned_cols=46 Identities=13% Similarity=0.179 Sum_probs=34.0
Q ss_pred cEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEcCCHHHHHHh
Q 002236 785 KVVYMDEPSTGLDPASRNNLWNVVKRAK-QGRAIILTTHSMEEAEAL 830 (949)
Q Consensus 785 ~vllLDEPTsGLDp~sr~~l~~~L~~~~-~g~tIIltTH~meeae~l 830 (949)
.+|+.|+-.-.-|+..|+++++++...+ .|..|.++|.+-++-+++
T Consensus 39 ~LlIsd~l~r~~~~~~r~~~~~l~~~~~~~g~~v~iiS~~~~~G~qL 85 (104)
T d2vgna3 39 YLLLTDKVLHSDNIAQREEYLKLMDSVESNGGKALVLSTLHSLGEEL 85 (104)
T ss_dssp EEEEETTGGGSSCHHHHHHHHHHHHHHHHTTCEEEEECTTSHHHHHH
T ss_pred EEEEecccccccccchHHHHHHHHHHHHhcCCEEEEEcCCChhHHHH
Confidence 7888899888899999999999998864 455555555554554443
No 276
>g1qhh.1 c.37.1.19 (A:,B:,C:,D:) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=24.00 E-value=14 Score=40.08 Aligned_cols=24 Identities=17% Similarity=0.019 Sum_probs=16.4
Q ss_pred HHHHHHcCCCcEEEEeCCCCCCCHH
Q 002236 775 SVAISLIGNPKVVYMDEPSTGLDPA 799 (949)
Q Consensus 775 slA~ALi~~P~vllLDEPTsGLDp~ 799 (949)
.++..+..+.+.++.||- -..++.
T Consensus 205 ~i~~~~~~~~~~i~vDE~-QD~~~~ 228 (623)
T g1qhh.1 205 DVLHYYQYKFQYIHIDEY-QDTNRA 228 (623)
T ss_dssp HHHHHHHHHCCEEEESCG-GGCCHH
T ss_pred HHHHhhhcceeEeecccc-ccchHH
Confidence 456667778889999984 344454
No 277
>d1xx6a1 c.37.1.24 (A:2-142) Thymidine kinase, TK1, N-terminal domain {Clostridium acetobutylicum [TaxId: 1488]}
Probab=23.54 E-value=20 Score=32.22 Aligned_cols=20 Identities=25% Similarity=0.278 Sum_probs=17.7
Q ss_pred CCcEEEEECCCCCcHHHHHH
Q 002236 657 SGECFGMLGPNGAGKTTFIS 676 (949)
Q Consensus 657 ~Gei~gLLG~NGAGKTTLlk 676 (949)
.|.+-.++||=.|||||-|=
T Consensus 6 ~G~l~lI~GpMfSGKTteLi 25 (141)
T d1xx6a1 6 HGWVEVIVGPMYSGKSEELI 25 (141)
T ss_dssp CCEEEEEECSTTSSHHHHHH
T ss_pred ceeEEEEEeccccHHHHHHH
Confidence 58999999999999999653
No 278
>d1j6ua3 c.72.2.1 (A:89-295) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}
Probab=23.16 E-value=21 Score=33.09 Aligned_cols=27 Identities=30% Similarity=0.455 Sum_probs=22.6
Q ss_pred eCCcEEEEECCCCCcHHHHHHHHhCCCCC
Q 002236 656 PSGECFGMLGPNGAGKTTFISMMIGITRT 684 (949)
Q Consensus 656 ~~Gei~gLLG~NGAGKTTLlk~L~Gl~~p 684 (949)
++.+++|+-|-| ||||+-.||.-++..
T Consensus 12 ~~~~~iAITGTn--GKTTt~~~l~~iL~~ 38 (207)
T d1j6ua3 12 EKKEEFAVTGTD--GKTTTTAMVAHVLKH 38 (207)
T ss_dssp HCCCEEEEECSS--SHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCC--CHHHHHHHHHHHHHh
Confidence 457899999998 599999999877754
No 279
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}
Probab=22.00 E-value=22 Score=32.58 Aligned_cols=24 Identities=17% Similarity=0.292 Sum_probs=19.0
Q ss_pred EEEEECCC-CCcHHHHHHHHhCCCC
Q 002236 660 CFGMLGPN-GAGKTTFISMMIGITR 683 (949)
Q Consensus 660 i~gLLG~N-GAGKTTLlk~L~Gl~~ 683 (949)
.+-|.|-+ |.||||+---|+..+.
T Consensus 3 ~~~i~gt~~GVGKTtvs~~La~aLa 27 (224)
T d1byia_ 3 RYFVTGTDTEVGKTVASCALLQAAK 27 (224)
T ss_dssp EEEEEESSTTSCHHHHHHHHHHHHH
T ss_pred eEEEEECCCCccHHHHHHHHHHHHH
Confidence 46688997 9999999877776554
Done!