Query 002238
Match_columns 948
No_of_seqs 794 out of 5887
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 18:12:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002238.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002238hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aoj_A High affinity nerve gro 100.0 3.6E-52 1.2E-56 454.9 23.1 261 593-876 41-319 (329)
2 4asz_A BDNF/NT-3 growth factor 100.0 1.2E-52 4.3E-57 452.1 19.1 262 592-876 12-289 (299)
3 3omv_A RAF proto-oncogene seri 100.0 5.8E-52 2E-56 446.6 24.0 263 592-877 35-301 (307)
4 4gt4_A Tyrosine-protein kinase 100.0 7.8E-52 2.7E-56 447.9 21.0 260 593-874 26-304 (308)
5 4b9d_A Serine/threonine-protei 100.0 6E-51 2.1E-55 444.6 20.6 253 593-870 24-277 (350)
6 4fih_A Serine/threonine-protei 100.0 1.7E-50 5.7E-55 440.4 21.9 250 592-869 73-323 (346)
7 4g3f_A NF-kappa-beta-inducing 100.0 1.7E-50 5.8E-55 439.1 18.5 255 593-878 58-318 (336)
8 3hmm_A TGF-beta receptor type- 100.0 5.2E-50 1.8E-54 435.1 21.8 269 593-876 3-297 (303)
9 3fpq_A Serine/threonine-protei 100.0 7.9E-50 2.7E-54 426.8 22.7 246 596-869 29-282 (290)
10 4aw0_A HPDK1, 3-phosphoinositi 100.0 5.5E-50 1.9E-54 429.7 18.8 251 593-870 32-285 (311)
11 4ase_A Vascular endothelial gr 100.0 3E-49 1E-53 435.1 23.7 268 590-878 61-349 (353)
12 4fie_A Serine/threonine-protei 100.0 2.5E-49 8.7E-54 441.7 22.7 250 592-869 150-400 (423)
13 3hyh_A Carbon catabolite-derep 100.0 7.1E-49 2.4E-53 415.6 22.4 247 593-869 13-262 (275)
14 3ubd_A Ribosomal protein S6 ki 100.0 3E-49 1E-53 424.2 14.8 245 593-865 24-272 (304)
15 4g31_A Eukaryotic translation 100.0 5.4E-47 1.8E-51 409.0 22.2 251 593-869 5-279 (299)
16 4b99_A Mitogen-activated prote 100.0 2.4E-45 8.3E-50 411.3 22.5 268 592-870 53-345 (398)
17 4f9c_A Cell division cycle 7-r 100.0 3.6E-45 1.2E-49 405.7 22.4 202 588-804 16-251 (361)
18 3uto_A Twitchin; kinase, muscl 100.0 3E-43 1E-47 414.2 26.8 252 592-869 156-410 (573)
19 2qkw_B Protein kinase; three-h 100.0 1.6E-43 5.6E-48 390.2 22.0 284 586-877 32-316 (321)
20 3v5w_A G-protein coupled recep 100.0 1.6E-43 5.3E-48 411.8 20.4 250 593-869 189-449 (689)
21 4eco_A Uncharacterized protein 100.0 1.1E-43 3.8E-48 427.3 18.0 400 28-450 27-578 (636)
22 3rgz_A Protein brassinosteroid 100.0 2.6E-43 9E-48 434.0 21.3 409 23-453 4-481 (768)
23 4ecn_A Leucine-rich repeat pro 100.0 2.7E-43 9.4E-48 430.2 19.7 404 26-455 264-822 (876)
24 3uim_A Brassinosteroid insensi 100.0 6.5E-43 2.2E-47 386.4 20.2 290 581-874 18-309 (326)
25 3p86_A Serine/threonine-protei 100.0 4.6E-42 1.6E-46 375.8 24.3 267 591-881 35-303 (309)
26 3s95_A LIMK-1, LIM domain kina 100.0 1.7E-41 6E-46 372.1 23.2 260 592-879 9-285 (310)
27 2nru_A Interleukin-1 receptor- 100.0 1.2E-40 4.3E-45 364.8 29.4 285 580-875 12-305 (307)
28 2izr_A Casein kinase I isoform 100.0 2.7E-41 9.4E-46 373.9 24.3 275 592-890 8-295 (330)
29 3fxz_A Serine/threonine-protei 100.0 3.3E-41 1.1E-45 367.1 24.4 250 592-869 19-269 (297)
30 3soc_A Activin receptor type-2 100.0 8.4E-42 2.9E-46 376.5 19.6 267 592-877 23-319 (322)
31 2psq_A Fibroblast growth facto 100.0 4E-41 1.4E-45 377.9 25.2 265 592-878 80-366 (370)
32 3fe3_A MAP/microtubule affinit 100.0 1.6E-41 5.6E-46 373.9 21.4 251 591-870 13-265 (328)
33 3zgw_A Maternal embryonic leuc 100.0 2E-41 7E-46 375.2 21.3 254 590-871 7-262 (347)
34 4hcu_A Tyrosine-protein kinase 100.0 3E-41 1E-45 362.2 21.8 257 592-876 9-266 (269)
35 3sxs_A Cytoplasmic tyrosine-pr 100.0 3.9E-41 1.3E-45 361.0 21.7 258 592-877 7-265 (268)
36 1ogq_A PGIP-2, polygalacturona 100.0 3.1E-41 1.1E-45 369.7 21.1 292 27-432 2-306 (313)
37 3kul_A Ephrin type-A receptor 100.0 1E-40 3.5E-45 368.0 25.2 260 592-877 48-314 (325)
38 1csn_A Casein kinase-1; phosph 100.0 1.4E-40 4.8E-45 362.7 25.8 276 591-889 8-296 (298)
39 4eqm_A Protein kinase; transfe 100.0 1.3E-40 4.5E-45 361.9 24.8 265 591-877 9-276 (294)
40 2c30_A Serine/threonine-protei 100.0 1.5E-40 5.1E-45 366.0 25.2 261 582-870 24-295 (321)
41 2yab_A Death-associated protei 100.0 2.7E-40 9.3E-45 368.6 27.1 254 591-869 10-272 (361)
42 3lb7_A RAF proto-oncogene seri 100.0 2.6E-40 9E-45 361.6 25.5 264 592-878 35-302 (307)
43 3cbl_A C-FES, proto-oncogene t 100.0 4.1E-41 1.4E-45 379.2 18.8 260 592-877 113-375 (377)
44 1tki_A Titin; serine kinase, m 100.0 1.1E-40 3.7E-45 366.9 21.7 253 591-870 3-258 (321)
45 3q4u_A Activin receptor type-1 100.0 2.9E-40 9.8E-45 360.8 24.4 265 591-874 6-300 (301)
46 3gen_A Tyrosine-protein kinase 100.0 1.3E-40 4.6E-45 360.0 21.5 257 592-876 23-280 (283)
47 2qol_A Ephrin receptor; recept 100.0 1.8E-40 6.2E-45 372.7 23.1 260 592-877 44-310 (373)
48 3niz_A Rhodanese family protei 100.0 3.4E-40 1.2E-44 361.6 24.2 269 591-869 19-300 (311)
49 2bdw_A Hypothetical protein K1 100.0 2E-40 6.8E-45 370.8 22.5 256 590-870 26-285 (362)
50 3op5_A Serine/threonine-protei 100.0 1.2E-40 4.1E-45 373.9 20.6 284 591-890 33-343 (364)
51 1luf_A Muscle-specific tyrosin 100.0 1.5E-40 5.2E-45 370.2 19.9 269 589-879 43-338 (343)
52 2y0a_A Death-associated protei 100.0 4.8E-40 1.7E-44 362.8 23.4 254 591-869 9-271 (326)
53 3soa_A Calcium/calmodulin-depe 100.0 6.8E-40 2.3E-44 375.0 25.3 257 590-870 8-268 (444)
54 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 3.7E-40 1.3E-44 380.2 23.3 261 592-880 183-444 (452)
55 3ugc_A Tyrosine-protein kinase 100.0 2.7E-40 9.1E-45 360.0 20.8 266 592-877 9-292 (295)
56 1o6l_A RAC-beta serine/threoni 100.0 5.5E-40 1.9E-44 362.7 23.6 251 592-870 4-261 (337)
57 1qcf_A Haematopoetic cell kina 100.0 2.2E-40 7.4E-45 382.5 21.0 257 592-876 187-444 (454)
58 3tt0_A Basic fibroblast growth 100.0 1.1E-39 3.8E-44 368.3 26.3 267 592-880 68-356 (382)
59 4hgt_A Casein kinase I isoform 100.0 7.2E-40 2.5E-44 356.7 23.9 277 590-889 6-293 (296)
60 1mp8_A Focal adhesion kinase 1 100.0 6.3E-40 2.2E-44 354.3 23.0 260 592-878 14-278 (281)
61 3rgz_A Protein brassinosteroid 100.0 8.4E-41 2.9E-45 411.7 18.3 381 69-455 295-744 (768)
62 3vhe_A Vascular endothelial gr 100.0 2.9E-40 1E-44 370.4 21.1 273 585-878 14-357 (359)
63 1ob3_A PFPK5, cell division co 100.0 5.1E-40 1.8E-44 356.3 22.2 266 593-869 2-280 (288)
64 4euu_A Serine/threonine-protei 100.0 2.6E-39 8.8E-44 356.3 28.0 275 592-875 8-308 (319)
65 3uzp_A CKI-delta, CKID, casein 100.0 1E-39 3.5E-44 355.5 24.5 276 591-889 7-293 (296)
66 3v8s_A RHO-associated protein 100.0 1.2E-40 4.2E-45 376.7 17.7 262 585-870 61-330 (410)
67 3l9p_A Anaplastic lymphoma kin 100.0 2.3E-40 8E-45 371.4 19.8 264 592-877 70-346 (367)
68 1opk_A P150, C-ABL, proto-onco 100.0 4E-40 1.4E-44 383.9 22.1 257 592-875 219-477 (495)
69 3t9t_A Tyrosine-protein kinase 100.0 5.2E-40 1.8E-44 352.1 21.2 257 592-876 7-264 (267)
70 2ivs_A Proto-oncogene tyrosine 100.0 1.1E-39 3.6E-44 358.6 23.9 264 592-877 22-312 (314)
71 3c0i_A Peripheral plasma membr 100.0 9.6E-40 3.3E-44 364.2 23.8 258 592-870 23-287 (351)
72 3qup_A Tyrosine-protein kinase 100.0 7E-40 2.4E-44 361.6 22.4 265 591-876 21-298 (323)
73 4aw2_A Serine/threonine-protei 100.0 2.6E-40 9.1E-45 376.8 19.5 265 584-870 65-339 (437)
74 3kmu_A ILK, integrin-linked ki 100.0 1E-39 3.5E-44 350.5 22.7 255 592-876 9-270 (271)
75 3tki_A Serine/threonine-protei 100.0 3.9E-40 1.3E-44 362.9 19.7 253 592-869 6-261 (323)
76 3dtc_A Mitogen-activated prote 100.0 1.1E-39 3.9E-44 350.3 22.7 256 592-874 6-271 (271)
77 3o0g_A Cell division protein k 100.0 1.9E-39 6.6E-44 352.6 24.8 267 593-869 2-282 (292)
78 3poz_A Epidermal growth factor 100.0 6.4E-40 2.2E-44 362.2 21.1 258 592-876 14-278 (327)
79 3og7_A AKAP9-BRAF fusion prote 100.0 7.8E-40 2.7E-44 355.0 21.4 262 592-876 23-288 (289)
80 1kob_A Twitchin; kinase, intra 100.0 3.1E-39 1.1E-43 363.3 26.8 254 591-870 49-305 (387)
81 3kfa_A Tyrosine-protein kinase 100.0 1.3E-39 4.5E-44 353.2 22.7 260 591-877 11-272 (288)
82 1k9a_A Carboxyl-terminal SRC k 100.0 2.7E-39 9.1E-44 372.8 26.5 252 592-876 192-445 (450)
83 3txo_A PKC-L, NPKC-ETA, protei 100.0 4.1E-40 1.4E-44 366.2 18.9 250 592-869 22-280 (353)
84 2eva_A TAK1 kinase - TAB1 chim 100.0 9.5E-40 3.3E-44 357.4 21.4 259 593-880 8-267 (307)
85 3sv0_A Casein kinase I-like; t 100.0 1.7E-39 5.7E-44 374.7 24.5 277 591-890 5-292 (483)
86 4f0f_A Serine/threonine-protei 100.0 2E-39 6.8E-44 351.5 23.3 255 592-874 18-287 (287)
87 4fr4_A YANK1, serine/threonine 100.0 1.2E-39 4.1E-44 365.3 22.2 252 592-869 14-271 (384)
88 1qpc_A LCK kinase; alpha beta 100.0 2.3E-39 7.8E-44 349.6 23.5 259 592-878 12-271 (279)
89 3mdy_A Bone morphogenetic prot 100.0 5.3E-39 1.8E-43 356.8 27.0 275 585-878 29-333 (337)
90 2zv2_A Calcium/calmodulin-depe 100.0 2.5E-39 8.6E-44 352.8 23.8 251 592-869 12-292 (298)
91 3p1a_A MYT1 kinase, membrane-a 100.0 1.5E-39 5.2E-44 356.6 22.1 247 592-869 56-304 (311)
92 1t46_A HOMO sapiens V-KIT hard 100.0 2.6E-39 8.7E-44 355.4 23.8 265 592-877 22-308 (313)
93 4dc2_A Protein kinase C IOTA t 100.0 2.1E-39 7.2E-44 364.5 23.5 251 592-864 51-307 (396)
94 1fot_A TPK1 delta, CAMP-depend 100.0 2.1E-39 7.2E-44 355.5 22.6 247 592-869 5-258 (318)
95 2vd5_A DMPK protein; serine/th 100.0 4.9E-40 1.7E-44 372.0 17.7 265 583-869 51-327 (412)
96 3kk8_A Calcium/calmodulin depe 100.0 6.4E-39 2.2E-43 347.0 25.5 255 591-870 4-262 (284)
97 3qd2_B Eukaryotic translation 100.0 4E-39 1.4E-43 356.9 23.7 252 592-869 5-325 (332)
98 4agu_A Cyclin-dependent kinase 100.0 5E-39 1.7E-43 352.7 24.3 270 592-870 2-285 (311)
99 2pmi_A Negative RE, cyclin-dep 100.0 5E-39 1.7E-43 353.4 24.2 270 592-869 4-293 (317)
100 3gni_B Strad alpha; kinase fol 100.0 3.9E-39 1.3E-43 365.1 24.0 273 592-870 24-334 (389)
101 2wqm_A Serine/threonine-protei 100.0 5.3E-39 1.8E-43 352.3 24.3 272 592-883 31-304 (310)
102 1xjd_A Protein kinase C, theta 100.0 1E-39 3.6E-44 361.5 18.8 250 591-868 15-268 (345)
103 1rjb_A FL cytokine receptor; k 100.0 3.5E-39 1.2E-43 359.4 23.0 265 592-877 44-335 (344)
104 3lxp_A Non-receptor tyrosine-p 100.0 3.1E-39 1.1E-43 355.3 22.3 264 595-880 33-314 (318)
105 2pvf_A Fibroblast growth facto 100.0 4.5E-39 1.5E-43 356.8 23.8 266 592-879 34-321 (334)
106 3h4j_B AMPK kdaid, SNF1-like p 100.0 1E-39 3.4E-44 360.2 18.4 249 592-870 8-259 (336)
107 2w4o_A Calcium/calmodulin-depe 100.0 5E-39 1.7E-43 357.9 24.0 252 590-869 50-305 (349)
108 1rdq_E PKA C-alpha, CAMP-depen 100.0 3.3E-39 1.1E-43 358.7 22.1 247 592-869 40-293 (350)
109 4e5w_A Tyrosine-protein kinase 100.0 2.5E-39 8.6E-44 353.5 20.8 264 592-875 20-301 (302)
110 3oz6_A Mitogen-activated prote 100.0 3.7E-39 1.3E-43 365.1 22.7 270 589-870 5-329 (388)
111 1u59_A Tyrosine-protein kinase 100.0 8E-39 2.7E-43 346.8 24.4 261 593-880 9-276 (287)
112 3dbq_A Dual specificity protei 100.0 1.5E-39 5.3E-44 361.7 19.2 255 592-872 8-276 (343)
113 2h8h_A Proto-oncogene tyrosine 100.0 1.4E-39 4.8E-44 382.8 19.8 260 592-879 266-526 (535)
114 2jii_A Serine/threonine-protei 100.0 7.9E-40 2.7E-44 365.6 16.9 275 592-888 41-348 (352)
115 3cc6_A Protein tyrosine kinase 100.0 3.9E-39 1.3E-43 348.1 21.7 258 592-876 11-273 (281)
116 3kex_A Receptor tyrosine-prote 100.0 2.7E-39 9.2E-44 357.0 20.8 258 592-876 12-276 (325)
117 1b6c_B TGF-B superfamily recep 100.0 1.3E-38 4.5E-43 354.4 26.5 276 584-878 33-338 (342)
118 2x4f_A Myosin light chain kina 100.0 5.8E-39 2E-43 360.2 23.7 247 598-870 94-343 (373)
119 3is5_A Calcium-dependent prote 100.0 3.6E-39 1.2E-43 349.0 21.3 255 591-869 20-278 (285)
120 2a2a_A Death-associated protei 100.0 1.1E-38 3.9E-43 351.4 25.4 254 591-869 10-272 (321)
121 3a8x_A Protein kinase C IOTA t 100.0 8.5E-39 2.9E-43 354.9 24.1 251 592-864 8-264 (345)
122 3ork_A Serine/threonine protei 100.0 3.3E-39 1.1E-43 354.0 20.2 257 591-870 10-274 (311)
123 1mqb_A Ephrin type-A receptor 100.0 1.4E-38 4.8E-43 352.3 25.4 260 592-877 43-310 (333)
124 1xbb_A Tyrosine-protein kinase 100.0 7.3E-39 2.5E-43 347.8 22.5 259 592-877 15-280 (291)
125 2zmd_A Dual specificity protei 100.0 3.1E-39 1.1E-43 364.9 20.2 253 593-871 56-322 (390)
126 3brb_A Proto-oncogene tyrosine 100.0 7.1E-39 2.4E-43 351.9 22.5 266 591-877 32-309 (313)
127 3hko_A Calcium/calmodulin-depe 100.0 2.6E-39 8.8E-44 360.6 19.2 265 588-870 21-331 (345)
128 3ttj_A Mitogen-activated prote 100.0 7.7E-39 2.6E-43 369.4 23.7 265 591-870 60-356 (464)
129 3uc3_A Serine/threonine-protei 100.0 6.2E-39 2.1E-43 358.7 21.9 253 592-870 19-275 (361)
130 3g33_A Cell division protein k 100.0 6.4E-39 2.2E-43 351.3 21.6 268 591-869 7-296 (308)
131 3c1x_A Hepatocyte growth facto 100.0 5.3E-39 1.8E-43 360.3 21.3 260 594-879 90-358 (373)
132 3a62_A Ribosomal protein S6 ki 100.0 6E-39 2E-43 354.2 21.3 250 592-869 16-276 (327)
133 1p4o_A Insulin-like growth fac 100.0 4.9E-39 1.7E-43 354.7 20.6 265 590-876 22-299 (322)
134 2xir_A Vascular endothelial gr 100.0 8.3E-39 2.8E-43 351.8 22.3 273 586-879 20-313 (316)
135 2i0e_A Protein kinase C-beta I 100.0 5.1E-39 1.8E-43 357.1 20.8 250 592-869 19-276 (353)
136 3g2f_A Bone morphogenetic prot 100.0 1.9E-39 6.5E-44 360.3 17.0 275 592-882 12-324 (336)
137 3f3z_A Calcium/calmodulin-depe 100.0 6.7E-39 2.3E-43 345.5 20.8 252 591-870 7-262 (277)
138 2h34_A Serine/threonine-protei 100.0 8.1E-39 2.8E-43 350.5 21.8 262 592-877 33-297 (309)
139 2eue_A Carbon catabolite derep 100.0 9.5E-39 3.3E-43 343.9 21.9 249 592-870 12-263 (275)
140 3e7e_A HBUB1, BUB1A, mitotic c 100.0 9E-39 3.1E-43 358.9 22.6 256 592-878 64-341 (365)
141 3llt_A Serine/threonine kinase 100.0 5.9E-39 2E-43 359.9 21.0 271 584-869 26-355 (360)
142 2ozo_A Tyrosine-protein kinase 100.0 1E-38 3.5E-43 380.7 24.3 261 594-881 336-603 (613)
143 1u5q_A Serine/threonine protei 100.0 1E-38 3.6E-43 354.8 22.5 251 592-872 53-308 (348)
144 4fvq_A Tyrosine-protein kinase 100.0 5.8E-39 2E-43 348.3 19.9 251 592-876 7-275 (289)
145 2acx_A G protein-coupled recep 100.0 5.8E-39 2E-43 374.0 21.3 256 592-870 183-445 (576)
146 2i1m_A Macrophage colony-stimu 100.0 1.1E-38 3.6E-43 353.8 22.5 265 592-877 45-327 (333)
147 4eut_A Serine/threonine-protei 100.0 8.7E-39 3E-43 362.7 22.1 277 592-877 8-310 (396)
148 3lzb_A Epidermal growth factor 100.0 6.4E-39 2.2E-43 354.0 20.5 258 592-876 14-278 (327)
149 2y94_A 5'-AMP-activated protei 100.0 1.1E-38 3.6E-43 367.3 23.0 250 592-870 15-267 (476)
150 3dls_A PAS domain-containing s 100.0 7.2E-39 2.5E-43 354.5 20.7 246 590-870 21-275 (335)
151 3lm5_A Serine/threonine-protei 100.0 4.4E-39 1.5E-43 355.6 18.5 262 585-869 20-287 (327)
152 3kn6_A Ribosomal protein S6 ki 100.0 7.7E-39 2.6E-43 352.9 20.4 249 598-869 16-270 (325)
153 3f66_A Hepatocyte growth facto 100.0 1.5E-38 5.2E-43 346.6 22.5 261 593-879 25-294 (298)
154 2qr7_A Ribosomal protein S6 ki 100.0 4.7E-39 1.6E-43 356.5 18.6 253 591-870 20-278 (342)
155 4aaa_A Cyclin-dependent kinase 100.0 9.6E-39 3.3E-43 353.6 20.9 270 592-870 24-307 (331)
156 2v62_A Serine/threonine-protei 100.0 6.6E-39 2.3E-43 357.0 19.6 267 592-876 36-328 (345)
157 3lxl_A Tyrosine-protein kinase 100.0 5.5E-39 1.9E-43 355.0 18.7 266 592-878 22-305 (327)
158 3gxj_A TGF-beta receptor type- 100.0 1.7E-40 5.7E-45 363.0 6.2 266 592-876 2-297 (303)
159 2w5a_A Serine/threonine-protei 100.0 6.3E-39 2.1E-43 346.1 18.4 257 592-871 5-269 (279)
160 1nxk_A MAP kinase-activated pr 100.0 2E-38 7E-43 359.3 23.5 254 592-872 60-324 (400)
161 1t4h_A Serine/threonine-protei 100.0 2.1E-38 7.2E-43 344.0 22.5 249 593-869 26-282 (290)
162 3fdn_A Serine/threonine-protei 100.0 7.7E-39 2.6E-43 345.4 18.9 249 592-870 8-258 (279)
163 3pls_A Macrophage-stimulating 100.0 2.9E-38 9.8E-43 344.4 23.5 261 594-880 22-291 (298)
164 3bhy_A Death-associated protei 100.0 3.4E-38 1.2E-42 341.1 23.7 254 592-870 4-266 (283)
165 2r5t_A Serine/threonine-protei 100.0 6.6E-39 2.3E-43 358.7 18.7 250 592-869 37-289 (373)
166 4fl3_A Tyrosine-protein kinase 100.0 1.4E-38 4.7E-43 380.4 22.6 252 599-877 375-632 (635)
167 1cm8_A Phosphorylated MAP kina 100.0 3.8E-38 1.3E-42 353.2 24.8 264 591-870 23-308 (367)
168 3cok_A Serine/threonine-protei 100.0 1.7E-38 5.8E-43 342.5 21.0 251 592-869 10-262 (278)
169 2y7j_A Phosphorylase B kinase 100.0 2.5E-38 8.7E-43 354.5 22.8 260 585-869 86-359 (365)
170 1fvr_A Tyrosine-protein kinase 100.0 2.8E-38 9.5E-43 349.4 22.8 263 592-878 24-302 (327)
171 3gbz_A Kinase, CMGC CDK; ssgci 100.0 7.8E-39 2.7E-43 353.8 18.1 268 590-869 31-318 (329)
172 1byg_A CSK, protein (C-termina 100.0 2.3E-38 8E-43 341.4 21.4 253 592-877 20-274 (278)
173 4ejn_A RAC-alpha serine/threon 100.0 5.6E-39 1.9E-43 370.2 17.6 251 592-869 147-404 (446)
174 3rp9_A Mitogen-activated prote 100.0 3.2E-38 1.1E-42 365.5 23.8 270 592-870 52-397 (458)
175 2ac3_A MAP kinase-interacting 100.0 4.1E-38 1.4E-42 346.3 23.2 259 592-869 11-295 (316)
176 3mwu_A Calmodulin-domain prote 100.0 1.6E-38 5.4E-43 370.7 21.0 254 591-870 20-277 (486)
177 2w1i_A JAK2; chromosomal rearr 100.0 2.9E-38 1E-42 348.9 21.8 267 592-878 40-324 (326)
178 3lij_A Calcium/calmodulin depe 100.0 1.9E-38 6.6E-43 370.6 21.3 254 591-870 35-292 (494)
179 3mi9_A Cell division protein k 100.0 3.9E-38 1.3E-42 351.8 22.9 269 592-869 16-311 (351)
180 3c4z_A Rhodopsin kinase; Ser/T 100.0 3.3E-38 1.1E-42 367.0 22.8 253 592-864 184-438 (543)
181 1vzo_A Ribosomal protein S6 ki 100.0 6.9E-39 2.4E-43 357.9 16.2 257 592-871 53-323 (355)
182 1x8b_A WEE1HU, WEE1-like prote 100.0 8E-38 2.8E-42 339.0 24.1 249 591-869 9-279 (289)
183 2buj_A Serine/threonine-protei 100.0 1.2E-38 4.2E-43 350.7 17.8 263 592-876 28-306 (317)
184 3mtl_A Cell division protein k 100.0 7E-39 2.4E-43 353.4 15.9 266 593-869 2-281 (324)
185 2yex_A Serine/threonine-protei 100.0 3.7E-38 1.2E-42 339.5 21.0 254 591-869 5-261 (276)
186 3a7i_A MST3 kinase, serine/thr 100.0 1.1E-37 3.7E-42 340.8 25.0 252 592-872 21-273 (303)
187 2yfx_A Tyrosine-protein kinase 100.0 3.1E-38 1E-42 349.0 20.9 264 592-877 29-305 (327)
188 2rku_A Serine/threonine-protei 100.0 7E-38 2.4E-42 340.6 23.1 251 592-870 14-266 (294)
189 3i6u_A CDS1, serine/threonine- 100.0 3E-38 1E-42 360.4 21.1 255 590-869 132-399 (419)
190 3n9x_A Phosphotransferase; mal 100.0 8.1E-38 2.8E-42 358.6 24.7 201 591-800 24-252 (432)
191 3byv_A Rhoptry kinase; malaria 100.0 2.6E-39 8.8E-44 364.8 11.9 246 592-869 72-359 (377)
192 3fme_A Dual specificity mitoge 100.0 4.8E-38 1.6E-42 341.2 21.1 255 592-869 6-266 (290)
193 2a19_B Interferon-induced, dou 100.0 2.1E-38 7.2E-43 342.8 18.1 250 591-877 9-275 (284)
194 2jam_A Calcium/calmodulin-depe 100.0 7.3E-38 2.5E-42 342.2 22.5 252 591-870 7-262 (304)
195 3q5i_A Protein kinase; CDPK, m 100.0 5.1E-38 1.7E-42 368.0 22.5 254 591-870 34-302 (504)
196 2owb_A Serine/threonine-protei 100.0 7.1E-38 2.4E-42 347.1 22.3 251 592-870 40-292 (335)
197 1ua2_A CAK, cell division prot 100.0 4.6E-38 1.6E-42 350.2 20.4 270 590-870 7-292 (346)
198 3ll6_A Cyclin G-associated kin 100.0 1.2E-37 4.1E-42 345.9 23.5 259 592-879 27-311 (337)
199 3nyv_A Calmodulin-domain prote 100.0 2.7E-38 9.3E-43 368.9 19.2 254 591-870 24-282 (484)
200 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.6E-38 5.5E-43 350.1 16.2 264 591-881 31-307 (319)
201 2fst_X Mitogen-activated prote 100.0 3.3E-38 1.1E-42 353.3 18.8 264 591-870 27-312 (367)
202 2xrw_A Mitogen-activated prote 100.0 1.3E-37 4.3E-42 350.0 23.6 266 592-870 24-319 (371)
203 3eqc_A Dual specificity mitoge 100.0 3.8E-38 1.3E-42 353.3 19.1 264 592-870 32-325 (360)
204 1u46_A ACK-1, activated CDC42 100.0 6.2E-38 2.1E-42 340.5 20.1 260 592-876 17-284 (291)
205 2vgo_A Serine/threonine-protei 100.0 9.1E-38 3.1E-42 337.9 21.3 249 592-870 13-263 (284)
206 2r3i_A Cell division protein k 100.0 1.3E-37 4.5E-42 339.4 22.6 267 593-869 3-283 (299)
207 3pg1_A Mitogen-activated prote 100.0 6.6E-38 2.3E-42 351.6 20.0 276 584-869 13-316 (362)
208 3kvw_A DYRK2, dual specificity 100.0 2E-37 6.9E-42 354.6 24.2 203 591-807 95-306 (429)
209 3com_A Serine/threonine-protei 100.0 2.3E-37 7.8E-42 340.0 23.6 253 590-870 26-279 (314)
210 2clq_A Mitogen-activated prote 100.0 2.3E-37 7.7E-42 336.8 23.3 252 594-869 23-278 (295)
211 3eb0_A Putative uncharacterize 100.0 2.3E-37 7.9E-42 349.6 24.1 265 590-869 4-321 (383)
212 2vwi_A Serine/threonine-protei 100.0 2.4E-38 8.1E-43 345.9 15.4 266 591-869 13-287 (303)
213 2h6d_A 5'-AMP-activated protei 100.0 1.2E-37 4.2E-42 335.4 20.6 250 592-870 10-262 (276)
214 3q60_A ROP5B; pseudokinase, tr 100.0 4E-38 1.4E-42 354.3 16.8 255 593-869 62-352 (371)
215 3e3p_A Protein kinase, putativ 100.0 2.7E-37 9.2E-42 346.4 23.3 272 587-870 17-315 (360)
216 1blx_A Cyclin-dependent kinase 100.0 2E-37 6.8E-42 342.4 21.7 268 591-869 9-296 (326)
217 2j0j_A Focal adhesion kinase 1 100.0 2.1E-37 7E-42 371.7 23.6 260 591-877 388-652 (656)
218 2j7t_A Serine/threonine-protei 100.0 4.5E-38 1.5E-42 343.6 16.2 253 591-869 17-275 (302)
219 2x7f_A TRAF2 and NCK-interacti 100.0 3.1E-37 1.1E-41 340.9 23.1 254 590-870 21-287 (326)
220 3pfq_A PKC-B, PKC-beta, protei 100.0 1.3E-37 4.3E-42 374.7 21.5 245 592-864 340-587 (674)
221 1j1b_A Glycogen synthase kinas 100.0 2.1E-37 7.2E-42 353.6 22.2 263 593-870 54-337 (420)
222 3qyz_A Mitogen-activated prote 100.0 2.2E-37 7.4E-42 347.4 21.9 266 592-870 26-314 (364)
223 3an0_A Dual specificity mitoge 100.0 5.6E-38 1.9E-42 349.0 16.9 257 591-870 49-311 (340)
224 2ycf_A Serine/threonine-protei 100.0 1.4E-37 4.9E-42 342.8 19.9 255 590-869 7-274 (322)
225 4exu_A Mitogen-activated prote 100.0 3.7E-37 1.3E-41 346.2 23.4 263 591-870 40-324 (371)
226 3nsz_A CK II alpha, casein kin 100.0 3.4E-37 1.2E-41 341.2 22.4 260 592-869 35-319 (330)
227 2b9h_A MAP kinase FUS3, mitoge 100.0 3.2E-37 1.1E-41 344.9 22.3 268 591-869 9-305 (353)
228 1z57_A Dual specificity protei 100.0 4.6E-37 1.6E-41 341.4 23.3 265 591-869 12-328 (339)
229 3j0a_A TOLL-like receptor 5; m 100.0 8.7E-37 3E-41 379.9 28.4 393 57-457 14-566 (844)
230 2wei_A Calmodulin-domain prote 100.0 1.8E-37 6.2E-42 336.1 19.4 256 589-870 18-277 (287)
231 1wak_A Serine/threonine-protei 100.0 1.5E-37 5.3E-42 353.3 19.7 264 592-869 36-391 (397)
232 2wtk_C Serine/threonine-protei 100.0 8.3E-37 2.8E-41 334.1 24.4 254 591-870 3-264 (305)
233 4e7w_A Glycogen synthase kinas 100.0 3.3E-37 1.1E-41 349.0 21.7 264 592-870 39-322 (394)
234 1phk_A Phosphorylase kinase; g 100.0 3.4E-37 1.2E-41 335.9 20.9 255 590-869 14-283 (298)
235 3rgf_A Cyclin-dependent kinase 100.0 2.8E-37 9.6E-42 351.7 20.4 271 592-870 19-334 (405)
236 3aln_A Dual specificity mitoge 100.0 3.4E-37 1.2E-41 340.7 20.1 259 592-870 21-286 (327)
237 3cek_A Dual specificity protei 100.0 2.7E-37 9.1E-42 339.3 18.9 254 591-870 26-293 (313)
238 1zy4_A Serine/threonine-protei 100.0 1.3E-36 4.4E-41 332.1 24.0 252 591-869 4-283 (303)
239 2pml_X PFPK7, Ser/Thr protein 100.0 1.2E-37 4.2E-42 347.5 16.2 267 592-869 30-322 (348)
240 3v47_A TOLL-like receptor 5B a 100.0 1E-36 3.5E-41 353.3 23.2 363 54-455 5-412 (455)
241 2i6l_A Mitogen-activated prote 100.0 7.6E-37 2.6E-41 336.7 20.4 266 591-870 9-306 (320)
242 3coi_A Mitogen-activated prote 100.0 1.7E-36 5.9E-41 338.7 23.4 262 592-870 23-306 (353)
243 2vx3_A Dual specificity tyrosi 100.0 3.5E-36 1.2E-40 339.8 26.0 205 591-807 52-265 (382)
244 2eu9_A Dual specificity protei 100.0 2.2E-36 7.5E-41 338.2 23.2 264 591-869 17-333 (355)
245 3fhr_A MAP kinase-activated pr 100.0 1.6E-36 5.5E-41 336.1 20.4 254 591-870 26-288 (336)
246 1q8y_A SR protein kinase; tran 100.0 8.7E-37 3E-41 344.1 18.1 264 592-869 18-333 (373)
247 2dyl_A Dual specificity mitoge 100.0 8.8E-37 3E-41 336.0 17.4 255 592-870 24-284 (318)
248 2rio_A Serine/threonine-protei 100.0 1.5E-36 5.2E-41 348.0 19.3 255 592-869 14-295 (434)
249 3a99_A Proto-oncogene serine/t 100.0 6.4E-37 2.2E-41 337.1 15.5 248 586-869 36-293 (320)
250 3vq2_A TLR4, TOLL-like recepto 100.0 1.1E-35 3.8E-40 357.6 26.2 373 68-456 32-563 (606)
251 2z81_A CD282 antigen, TOLL-lik 100.0 1.9E-35 6.3E-40 351.3 26.7 375 56-455 3-514 (549)
252 2iwi_A Serine/threonine-protei 100.0 2.3E-36 7.7E-41 331.7 16.5 246 588-869 26-283 (312)
253 3p23_A Serine/threonine-protei 100.0 4.1E-36 1.4E-40 343.3 17.5 249 592-869 23-283 (432)
254 3qa8_A MGC80376 protein; kinas 100.0 9.9E-36 3.4E-40 349.6 17.2 272 592-876 13-309 (676)
255 3uqc_A Probable conserved tran 100.0 5.9E-35 2E-39 315.3 21.7 233 592-876 30-265 (286)
256 2pzi_A Probable serine/threoni 100.0 6.2E-35 2.1E-39 354.0 20.5 241 592-875 79-327 (681)
257 3t6q_A CD180 antigen; protein- 100.0 7.7E-34 2.6E-38 341.6 29.2 368 68-451 33-462 (606)
258 2id5_A Lingo-1, leucine rich r 100.0 2.8E-34 9.6E-39 334.7 23.5 300 69-456 33-338 (477)
259 2z63_A TOLL-like receptor 4, v 100.0 2.1E-34 7.1E-39 344.0 22.7 373 68-456 28-536 (570)
260 3m2w_A MAP kinase-activated pr 100.0 7E-34 2.4E-38 309.7 23.8 231 592-870 16-257 (299)
261 3dzo_A Rhoptry kinase domain; 100.0 7.2E-35 2.5E-39 331.9 16.0 246 592-869 77-363 (413)
262 3t6q_A CD180 antigen; protein- 100.0 1.1E-33 3.7E-38 340.3 23.0 368 68-455 129-564 (606)
263 1ziw_A TOLL-like receptor 3; i 100.0 7E-33 2.4E-37 337.8 29.1 364 68-449 25-465 (680)
264 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 6.5E-33 2.2E-37 329.8 26.4 341 68-455 52-514 (562)
265 2z7x_B TOLL-like receptor 1, v 100.0 5.3E-33 1.8E-37 327.7 23.9 337 68-455 21-485 (520)
266 2vuw_A Serine/threonine-protei 100.0 3.5E-34 1.2E-38 317.7 12.6 244 592-868 19-329 (336)
267 1ziw_A TOLL-like receptor 3; i 100.0 1.7E-32 5.9E-37 334.4 28.2 380 68-456 222-627 (680)
268 4g8a_A TOLL-like receptor 4; l 100.0 1.2E-32 4E-37 333.2 25.6 373 68-456 52-585 (635)
269 3oja_B Anopheles plasmodium-re 100.0 1.2E-32 4.1E-37 329.4 23.5 308 68-455 51-362 (597)
270 4eco_A Uncharacterized protein 100.0 7.6E-33 2.6E-37 332.9 20.5 338 68-454 206-603 (636)
271 3v47_A TOLL-like receptor 5B a 100.0 2E-32 6.7E-37 317.2 22.9 330 68-437 54-414 (455)
272 4fcg_A Uncharacterized protein 100.0 3.9E-33 1.3E-37 307.2 14.1 282 27-431 23-314 (328)
273 3o6n_A APL1; leucine-rich repe 100.0 4.7E-32 1.6E-36 307.1 23.2 307 68-454 45-355 (390)
274 4ecn_A Leucine-rich repeat pro 100.0 4.1E-32 1.4E-36 331.7 24.2 336 68-452 448-841 (876)
275 1ogq_A PGIP-2, polygalacturona 100.0 8.3E-33 2.8E-37 302.8 16.1 251 116-456 51-309 (313)
276 3vq2_A TLR4, TOLL-like recepto 100.0 9.9E-32 3.4E-36 323.2 26.3 362 71-451 14-534 (606)
277 2id5_A Lingo-1, leucine rich r 100.0 1.6E-31 5.5E-36 311.4 22.5 300 68-455 56-360 (477)
278 2z7x_B TOLL-like receptor 1, v 100.0 1.1E-31 3.8E-36 316.4 19.6 145 71-224 3-149 (520)
279 2z63_A TOLL-like receptor 4, v 100.0 2E-31 6.7E-36 318.2 18.6 367 72-451 11-507 (570)
280 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 2.5E-30 8.4E-35 307.6 26.5 338 71-456 34-490 (562)
281 2z81_A CD282 antigen, TOLL-lik 100.0 4.8E-31 1.6E-35 313.3 19.2 342 68-435 50-514 (549)
282 3oja_B Anopheles plasmodium-re 100.0 2.1E-30 7.4E-35 309.8 24.4 306 68-454 75-383 (597)
283 1o6v_A Internalin A; bacterial 100.0 6E-30 2E-34 296.8 26.0 321 69-452 47-389 (466)
284 3o6n_A APL1; leucine-rich repe 100.0 5.8E-30 2E-34 290.0 24.4 306 68-454 69-377 (390)
285 2z80_A TOLL-like receptor 2, v 100.0 1.6E-30 5.5E-35 290.3 19.5 282 54-436 27-319 (353)
286 4fmz_A Internalin; leucine ric 100.0 1E-29 3.5E-34 283.1 25.6 298 68-449 44-344 (347)
287 1xku_A Decorin; proteoglycan, 100.0 1.9E-29 6.3E-34 278.9 27.3 265 70-431 33-306 (330)
288 3j0a_A TOLL-like receptor 5; m 100.0 1E-29 3.5E-34 316.2 28.1 334 71-451 7-394 (844)
289 2ft3_A Biglycan; proteoglycan, 100.0 2.1E-29 7.3E-34 278.6 25.9 197 70-304 35-234 (332)
290 3bz5_A Internalin-J, INLJ; leu 100.0 4.5E-29 1.6E-33 287.1 27.4 303 68-432 42-353 (457)
291 1o6v_A Internalin A; bacterial 100.0 2.7E-29 9.1E-34 291.4 25.2 306 68-436 68-393 (466)
292 1xku_A Decorin; proteoglycan, 100.0 6.4E-29 2.2E-33 274.5 24.5 278 57-429 31-330 (330)
293 4fmz_A Internalin; leucine ric 100.0 5.2E-29 1.8E-33 277.5 23.3 285 88-455 40-328 (347)
294 3bz5_A Internalin-J, INLJ; leu 100.0 4.6E-29 1.6E-33 287.0 22.3 282 68-408 64-353 (457)
295 4g8a_A TOLL-like receptor 4; l 100.0 1.3E-28 4.3E-33 297.9 25.1 329 68-432 76-581 (635)
296 3zyi_A Leucine-rich repeat-con 100.0 4.7E-28 1.6E-32 279.7 25.4 246 72-432 58-304 (452)
297 3zyj_A Leucine-rich repeat-con 100.0 4.9E-28 1.7E-32 278.5 25.5 247 71-432 46-293 (440)
298 1jl5_A Outer protein YOPM; leu 100.0 3.1E-28 1.1E-32 279.9 23.0 326 68-452 11-371 (454)
299 2z66_A Variable lymphocyte rec 100.0 2.8E-28 9.6E-33 266.4 21.0 250 57-433 7-263 (306)
300 2ft3_A Biglycan; proteoglycan, 100.0 6.5E-28 2.2E-32 266.7 23.1 277 57-429 33-331 (332)
301 1jl5_A Outer protein YOPM; leu 100.0 4.8E-27 1.7E-31 270.0 28.2 308 68-435 91-415 (454)
302 1wwl_A Monocyte differentiatio 100.0 3.5E-29 1.2E-33 274.0 6.3 249 88-433 39-311 (312)
303 3g06_A SSPH2 (leucine-rich rep 99.9 2E-27 6.8E-32 281.3 21.4 281 50-436 14-302 (622)
304 1ozn_A Reticulon 4 receptor; N 99.9 2.5E-27 8.4E-32 256.0 18.7 209 62-303 6-217 (285)
305 4azs_A Methyltransferase WBDD; 99.9 1.7E-28 5.9E-33 288.6 7.3 187 600-799 241-437 (569)
306 2o6q_A Variable lymphocyte rec 99.9 4.5E-26 1.5E-30 243.8 22.2 217 54-302 2-220 (270)
307 3zyj_A Leucine-rich repeat-con 99.9 5.7E-26 2E-30 261.2 24.3 249 94-456 45-297 (440)
308 2z80_A TOLL-like receptor 2, v 99.9 4.2E-27 1.5E-31 262.5 14.0 272 94-455 33-318 (353)
309 4fcg_A Uncharacterized protein 99.9 2.1E-26 7.3E-31 253.4 19.4 253 49-407 61-314 (328)
310 2z66_A Variable lymphocyte rec 99.9 5E-26 1.7E-30 248.5 21.0 247 95-455 10-265 (306)
311 3zyi_A Leucine-rich repeat-con 99.9 1E-25 3.6E-30 260.0 24.2 248 94-456 56-308 (452)
312 3o53_A Protein LRIM1, AGAP0063 99.9 3.9E-28 1.3E-32 266.3 1.4 265 69-435 11-280 (317)
313 1ozn_A Reticulon 4 receptor; N 99.9 4.6E-26 1.6E-30 246.0 17.3 205 68-301 32-239 (285)
314 1wwl_A Monocyte differentiatio 99.9 6.1E-28 2.1E-32 264.2 2.4 264 50-409 23-311 (312)
315 3o53_A Protein LRIM1, AGAP0063 99.9 1.2E-26 4E-31 254.6 8.5 248 68-414 34-283 (317)
316 3oja_A Leucine-rich immune mol 99.9 3.8E-26 1.3E-30 265.2 11.8 219 115-435 34-255 (487)
317 3oja_A Leucine-rich immune mol 99.9 3.1E-26 1E-30 266.0 8.8 235 90-426 32-270 (487)
318 3en9_A Glycoprotease, O-sialog 99.9 3.7E-26 1.3E-30 267.3 8.1 187 596-801 339-539 (540)
319 3g06_A SSPH2 (leucine-rich rep 99.9 2E-23 6.8E-28 247.1 27.4 257 92-454 40-300 (622)
320 2z62_A TOLL-like receptor 4, v 99.9 4.6E-24 1.6E-28 229.1 18.8 212 68-305 28-242 (276)
321 2z62_A TOLL-like receptor 4, v 99.9 1.3E-23 4.3E-28 225.7 20.3 62 374-436 181-242 (276)
322 3rfs_A Internalin B, repeat mo 99.9 1.2E-23 4.1E-28 225.2 15.8 227 93-419 20-247 (272)
323 1z7x_W Ribonuclease inhibitor; 99.9 1E-26 3.5E-31 269.6 -10.0 326 69-432 29-412 (461)
324 3rfs_A Internalin B, repeat mo 99.9 9E-24 3.1E-28 226.1 13.1 221 116-437 20-241 (272)
325 1z7x_W Ribonuclease inhibitor; 99.9 5E-27 1.7E-31 272.3 -15.0 350 68-451 3-411 (461)
326 1p9a_G Platelet glycoprotein I 99.9 1.5E-22 5E-27 218.4 20.8 201 64-300 6-208 (290)
327 1p9a_G Platelet glycoprotein I 99.9 1.3E-22 4.5E-27 218.8 20.1 203 135-431 6-208 (290)
328 4glp_A Monocyte differentiatio 99.9 1.1E-23 3.7E-28 230.2 10.8 201 140-432 92-308 (310)
329 3m19_A Variable lymphocyte rec 99.9 2.5E-22 8.5E-27 212.2 20.1 190 55-302 3-194 (251)
330 2o6q_A Variable lymphocyte rec 99.9 4.6E-22 1.6E-26 212.6 22.1 137 238-433 83-220 (270)
331 3goz_A Leucine-rich repeat-con 99.9 2.9E-24 1E-28 240.2 0.2 63 371-433 226-299 (362)
332 2xwt_C Thyrotropin receptor; s 99.9 4.7E-22 1.6E-26 208.5 16.9 189 83-305 25-223 (239)
333 1h6u_A Internalin H; cell adhe 99.9 6.3E-22 2.2E-26 215.7 15.6 189 69-300 42-230 (308)
334 1zar_A RIO2 kinase; serine kin 99.9 1.6E-22 5.3E-27 216.8 10.6 155 585-773 82-252 (282)
335 2ast_B S-phase kinase-associat 99.9 3.3E-24 1.1E-28 237.5 -2.9 142 55-203 35-182 (336)
336 2xwt_C Thyrotropin receptor; s 99.9 9.7E-22 3.3E-26 206.1 16.0 196 68-298 31-237 (239)
337 4glp_A Monocyte differentiatio 99.9 2.2E-22 7.4E-27 219.9 11.0 202 70-300 93-307 (310)
338 2ca6_A RAN GTPase-activating p 99.9 2E-24 7E-29 243.9 -6.0 66 370-435 244-320 (386)
339 3goz_A Leucine-rich repeat-con 99.9 1.2E-23 4.3E-28 235.0 0.4 265 72-414 2-304 (362)
340 3m19_A Variable lymphocyte rec 99.9 7.6E-21 2.6E-25 200.8 20.9 176 93-323 15-192 (251)
341 1h6u_A Internalin H; cell adhe 99.9 3.3E-21 1.1E-25 209.9 17.8 197 88-326 37-233 (308)
342 4ay9_X Follicle-stimulating ho 99.9 7.3E-21 2.5E-25 211.4 19.3 196 74-302 15-217 (350)
343 3cvr_A Invasion plasmid antige 99.9 2.2E-21 7.4E-26 226.7 15.5 197 53-305 39-248 (571)
344 2o6s_A Variable lymphocyte rec 99.8 5.8E-21 2E-25 195.5 15.3 183 57-288 7-190 (208)
345 2ca6_A RAN GTPase-activating p 99.8 4.5E-23 1.5E-27 232.9 -1.1 253 83-411 23-320 (386)
346 4ay9_X Follicle-stimulating ho 99.8 1.1E-20 3.7E-25 210.1 16.6 242 95-430 12-258 (350)
347 2ast_B S-phase kinase-associat 99.8 2E-22 6.7E-27 223.1 0.7 252 93-438 48-313 (336)
348 3cvr_A Invasion plasmid antige 99.8 1.7E-20 5.7E-25 219.3 15.1 196 116-419 60-255 (571)
349 2o6s_A Variable lymphocyte rec 99.8 9E-20 3.1E-24 186.6 15.2 104 95-203 10-113 (208)
350 4b8c_D Glucose-repressible alc 99.8 3.2E-21 1.1E-25 234.0 3.1 225 28-305 129-359 (727)
351 3e6j_A Variable lymphocyte rec 99.8 3.5E-19 1.2E-23 185.0 15.3 154 50-207 12-176 (229)
352 1h6t_A Internalin B; cell adhe 99.8 4.9E-19 1.7E-23 191.0 14.6 173 88-301 42-214 (291)
353 1m9s_A Internalin B; cell inva 99.8 8E-19 2.7E-23 207.5 16.7 188 73-303 26-213 (605)
354 2v70_A SLIT-2, SLIT homolog 2 99.8 4.5E-18 1.5E-22 175.3 17.2 152 72-255 15-168 (220)
355 3ogk_B Coronatine-insensitive 99.8 1E-20 3.5E-25 226.5 -4.8 325 68-433 164-528 (592)
356 2xot_A Amphoterin-induced prot 99.8 2.4E-18 8.4E-23 191.8 14.1 173 72-300 22-202 (361)
357 1zth_A RIO1 serine protein kin 99.8 1.2E-18 4E-23 184.4 10.6 138 595-749 49-219 (258)
358 3ogk_B Coronatine-insensitive 99.8 6.1E-21 2.1E-25 228.4 -9.1 342 69-450 139-525 (592)
359 2v9t_B SLIT homolog 2 protein 99.7 1.2E-17 4.1E-22 172.2 16.3 150 72-254 15-166 (220)
360 1m9s_A Internalin B; cell inva 99.7 2.4E-18 8.3E-23 203.4 12.3 170 68-278 43-212 (605)
361 1h6t_A Internalin B; cell adhe 99.7 4.3E-18 1.5E-22 183.6 12.6 169 68-277 46-214 (291)
362 2v70_A SLIT-2, SLIT homolog 2 99.7 1.4E-17 4.8E-22 171.6 15.4 152 95-301 14-167 (220)
363 2v9t_B SLIT homolog 2 protein 99.7 1.9E-17 6.6E-22 170.5 16.4 109 95-208 14-122 (220)
364 2xot_A Amphoterin-induced prot 99.7 5.6E-18 1.9E-22 188.9 12.5 147 57-204 18-177 (361)
365 4ezg_A Putative uncharacterize 99.7 1.2E-17 4.1E-22 169.1 11.6 155 112-301 41-195 (197)
366 3e6j_A Variable lymphocyte rec 99.7 6.7E-17 2.3E-21 167.7 17.0 108 94-208 21-129 (229)
367 1xeu_A Internalin C; cellular 99.7 6.1E-18 2.1E-22 179.5 9.1 172 90-303 17-188 (263)
368 1dce_A Protein (RAB geranylger 99.7 3.9E-20 1.3E-24 217.5 -10.5 122 241-425 442-567 (567)
369 4ezg_A Putative uncharacterize 99.7 2.5E-17 8.7E-22 166.7 10.9 154 89-276 41-194 (197)
370 2p1m_B Transport inhibitor res 99.7 7.6E-20 2.6E-24 219.0 -9.4 365 68-450 105-518 (594)
371 1dce_A Protein (RAB geranylger 99.7 4E-20 1.4E-24 217.4 -12.0 191 136-436 346-551 (567)
372 1xeu_A Internalin C; cellular 99.7 3.5E-17 1.2E-21 173.5 10.7 168 69-278 20-187 (263)
373 4b8c_D Glucose-repressible alc 99.7 1.1E-17 3.6E-22 203.0 4.3 193 73-303 206-407 (727)
374 1w8a_A SLIT protein; signaling 99.7 5.3E-16 1.8E-20 156.1 13.5 131 71-207 11-143 (192)
375 1w8a_A SLIT protein; signaling 99.6 2.8E-16 9.5E-21 158.2 10.5 111 95-210 11-122 (192)
376 2p1m_B Transport inhibitor res 99.6 2.3E-18 8E-23 206.1 -6.7 321 68-432 130-520 (594)
377 2ell_A Acidic leucine-rich nuc 99.6 4.2E-16 1.4E-20 153.3 10.2 137 68-208 24-164 (168)
378 4gyi_A RIO2 kinase; protein ki 99.6 1.1E-16 3.7E-21 175.2 5.0 138 594-749 96-265 (397)
379 2o6r_A Variable lymphocyte rec 99.6 2.9E-15 1E-19 148.6 13.6 134 57-207 7-141 (177)
380 2je0_A Acidic leucine-rich nuc 99.6 6.2E-16 2.1E-20 148.7 6.6 129 68-199 17-149 (149)
381 2wfh_A SLIT homolog 2 protein 99.6 6.4E-15 2.2E-19 148.1 14.0 128 72-205 14-141 (193)
382 2ell_A Acidic leucine-rich nuc 99.6 4.7E-15 1.6E-19 145.7 10.8 134 139-302 24-162 (168)
383 2o6r_A Variable lymphocyte rec 99.5 3.5E-14 1.2E-18 140.8 14.4 133 94-257 9-141 (177)
384 3sb4_A Hypothetical leucine ri 99.5 4E-15 1.4E-19 163.6 7.2 103 262-425 225-328 (329)
385 2wfh_A SLIT homolog 2 protein 99.5 5.8E-14 2E-18 141.1 15.0 82 119-207 14-95 (193)
386 2je0_A Acidic leucine-rich nuc 99.5 9.6E-15 3.3E-19 140.4 7.8 127 115-296 17-149 (149)
387 1a9n_A U2A', U2A'; complex (nu 99.5 3.1E-14 1.1E-18 141.0 8.6 131 66-204 17-154 (176)
388 1a9n_A U2A', U2A'; complex (nu 99.5 7.6E-14 2.6E-18 138.2 9.5 134 135-301 15-154 (176)
389 4fdw_A Leucine rich hypothetic 99.5 1.6E-12 5.4E-17 146.0 21.2 170 92-300 113-284 (401)
390 1ds9_A Outer arm dynein; leuci 99.4 6.5E-16 2.2E-20 156.4 -7.4 149 116-300 19-185 (198)
391 3g39_A Variable lymphocyte rec 99.4 9.4E-13 3.2E-17 129.3 12.5 102 72-177 13-115 (170)
392 1ds9_A Outer arm dynein; leuci 99.4 1.1E-15 3.8E-20 154.6 -9.3 161 68-253 18-185 (198)
393 3sb4_A Hypothetical leucine ri 99.4 8.6E-13 3E-17 144.9 11.5 99 189-315 225-326 (329)
394 3g39_A Variable lymphocyte rec 99.4 2.5E-12 8.6E-17 126.2 12.8 109 94-207 11-119 (170)
395 2r9u_A Variable lymphocyte rec 99.4 2.6E-12 8.9E-17 126.6 12.8 102 71-177 15-118 (174)
396 2r9u_A Variable lymphocyte rec 99.4 3.2E-12 1.1E-16 125.9 12.6 106 94-205 14-120 (174)
397 4fdw_A Leucine rich hypothetic 99.3 3.3E-11 1.1E-15 135.2 19.7 253 79-431 123-383 (401)
398 3tm0_A Aminoglycoside 3'-phosp 99.2 3.1E-11 1.1E-15 127.8 12.2 146 589-747 10-212 (263)
399 2ifg_A High affinity nerve gro 99.2 2E-11 6.8E-16 135.1 10.9 84 57-153 8-94 (347)
400 2ifg_A High affinity nerve gro 99.2 5.4E-11 1.8E-15 131.6 11.1 106 95-205 11-118 (347)
401 3un9_A NLR family member X1; l 99.2 3.9E-13 1.3E-17 149.4 -6.5 165 115-301 72-253 (372)
402 1nd4_A Aminoglycoside 3'-phosp 99.1 8.5E-11 2.9E-15 124.2 8.6 137 593-747 20-213 (264)
403 3un9_A NLR family member X1; l 99.1 7.1E-13 2.4E-17 147.3 -8.9 161 115-300 101-283 (372)
404 4fs7_A Uncharacterized protein 99.0 4.4E-09 1.5E-13 118.3 19.4 289 86-428 65-376 (394)
405 3dxp_A Putative acyl-COA dehyd 99.0 1.8E-09 6.1E-14 119.9 12.3 143 597-748 42-248 (359)
406 3sg8_A APH(2'')-ID; antibiotic 98.9 1.5E-09 5E-14 117.5 8.2 186 598-800 25-287 (304)
407 4fs7_A Uncharacterized protein 98.9 3.9E-08 1.3E-12 110.5 17.6 265 110-428 66-353 (394)
408 2ra8_A Uncharacterized protein 98.8 1.1E-09 3.8E-14 120.4 3.9 102 67-172 106-227 (362)
409 4gt6_A Cell surface protein; l 98.8 1.8E-07 6.1E-12 105.1 20.0 37 258-295 260-296 (394)
410 2ra8_A Uncharacterized protein 98.7 3.7E-09 1.3E-13 116.3 3.9 185 91-301 106-321 (362)
411 4gt6_A Cell surface protein; l 98.7 4.8E-07 1.7E-11 101.5 21.0 293 86-430 57-369 (394)
412 3r70_A Aminoglycoside phosphot 98.6 3.2E-07 1.1E-11 99.8 14.6 136 594-748 38-237 (320)
413 3rw6_A Nuclear RNA export fact 98.5 1.6E-09 5.4E-14 113.0 -5.8 147 56-207 77-237 (267)
414 3d1u_A Putative fructosamine-3 98.5 5.2E-07 1.8E-11 96.1 12.6 78 595-678 17-97 (288)
415 3tdw_A Gentamicin resistance p 98.4 2.5E-06 8.6E-11 91.9 14.9 136 598-748 24-224 (306)
416 4gkh_A Aminoglycoside 3'-phosp 98.4 1.7E-06 5.9E-11 91.5 12.4 134 600-747 31-222 (272)
417 4h09_A Hypothetical leucine ri 98.3 2.8E-05 9.5E-10 86.5 21.3 61 366-427 282-342 (379)
418 3ovc_A Hygromycin-B 4-O-kinase 98.3 4.5E-06 1.5E-10 92.1 13.8 77 595-679 43-122 (362)
419 1io0_A Tropomodulin; LRR prote 98.1 2.5E-07 8.5E-12 91.7 -0.3 67 86-152 30-106 (185)
420 1io0_A Tropomodulin; LRR prote 98.1 3E-07 1E-11 91.1 0.1 64 237-300 90-164 (185)
421 3ats_A Putative uncharacterize 98.1 5.6E-06 1.9E-10 91.4 9.2 82 598-679 25-121 (357)
422 3rw6_A Nuclear RNA export fact 98.0 2.9E-06 9.8E-11 88.3 4.3 66 368-435 168-237 (267)
423 2q83_A YTAA protein; 2635576, 98.0 4.3E-05 1.5E-09 83.6 13.7 142 599-747 38-251 (346)
424 4h09_A Hypothetical leucine ri 97.8 0.00062 2.1E-08 75.5 20.1 59 369-428 262-320 (379)
425 2olc_A MTR kinase, methylthior 97.8 9.1E-05 3.1E-09 82.9 12.6 77 598-676 35-120 (397)
426 3jr1_A Putative fructosamine-3 97.8 0.00021 7.3E-09 76.4 13.7 141 597-744 40-232 (312)
427 3f7w_A Putative fructosamine-3 97.7 0.0001 3.5E-09 78.4 11.0 79 594-678 16-97 (288)
428 2pyw_A Uncharacterized protein 97.7 9.7E-05 3.3E-09 83.3 10.7 77 717-796 231-312 (420)
429 2ppq_A HSK, HK, homoserine kin 97.4 0.0013 4.3E-08 71.1 13.9 159 584-747 8-216 (322)
430 3e4g_A ATP synthase subunit S, 97.4 4E-05 1.4E-09 73.8 1.7 58 92-149 61-124 (176)
431 1zyl_A Hypothetical protein YI 97.2 0.0018 6.1E-08 70.1 13.0 143 599-747 32-222 (328)
432 3csv_A Aminoglycoside phosphot 97.2 0.0011 3.8E-08 71.9 11.3 143 599-748 24-217 (333)
433 3e4g_A ATP synthase subunit S, 97.2 8.4E-05 2.9E-09 71.5 1.3 85 114-201 60-150 (176)
434 3dxq_A Choline/ethanolamine ki 97.2 0.00098 3.3E-08 71.3 9.5 74 595-678 20-95 (301)
435 3feg_A Choline/ethanolamine ki 97.0 0.002 6.8E-08 70.8 10.6 143 598-747 55-253 (379)
436 3rfe_A Platelet glycoprotein I 96.9 0.0013 4.6E-08 60.2 6.8 55 96-152 12-68 (130)
437 1nw1_A Choline kinase (49.2 KD 96.9 0.002 7E-08 72.4 9.5 73 598-678 78-159 (429)
438 1pgv_A TMD-1, tropomodulin TMD 96.8 0.00032 1.1E-08 68.9 1.5 91 188-300 68-170 (197)
439 2qg7_A Ethanolamine kinase PV0 96.7 0.0041 1.4E-07 70.2 10.2 74 598-678 113-188 (458)
440 3c5i_A Choline kinase; choline 96.6 0.0048 1.6E-07 68.0 9.3 74 598-678 38-121 (369)
441 3i1a_A Spectinomycin phosphotr 96.5 0.0092 3.2E-07 64.8 10.6 32 717-748 205-236 (339)
442 1pgv_A TMD-1, tropomodulin TMD 96.4 0.00035 1.2E-08 68.6 -0.9 66 87-152 36-111 (197)
443 3rfe_A Platelet glycoprotein I 96.2 0.0069 2.4E-07 55.4 6.5 56 243-300 11-68 (130)
444 3f2s_A CK, chetk-alpha, cholin 95.9 0.024 8.2E-07 62.5 9.9 145 599-747 58-279 (401)
445 2yle_A Protein spire homolog 1 95.8 0.067 2.3E-06 52.6 11.8 101 677-798 34-134 (229)
446 3mes_A Choline kinase; malaria 95.4 0.051 1.7E-06 60.4 10.4 142 598-747 75-290 (424)
447 2ks1_B Epidermal growth factor 89.6 0.25 8.4E-06 34.7 2.9 25 492-516 13-37 (44)
448 2l2t_A Receptor tyrosine-prote 89.3 0.29 1E-05 34.3 3.1 27 491-517 11-37 (44)
449 3g15_A CK, chetk-alpha, cholin 88.8 1.5 5.2E-05 48.3 10.4 29 719-747 245-279 (401)
450 3cxl_A N-chimerin; SH2, RHO-GA 85.1 0.097 3.3E-06 59.1 -2.0 63 597-662 146-215 (463)
451 2jwa_A Receptor tyrosine-prote 81.3 0.95 3.3E-05 31.6 2.5 26 492-518 14-40 (44)
452 4ano_A ESSB; membrane protein, 77.9 4.2 0.00015 40.0 7.0 114 649-801 48-163 (219)
453 4ann_A ESSB; membrane protein, 75.4 3.5 0.00012 40.4 5.6 115 649-801 43-158 (215)
454 2klu_A T-cell surface glycopro 51.1 14 0.00047 28.1 3.3 21 501-521 19-41 (70)
455 2k1k_A Ephrin type-A receptor 48.3 15 0.00052 24.8 3.0 20 495-514 16-35 (38)
456 2k9y_A Ephrin type-A receptor 47.8 12 0.00039 25.8 2.5 10 493-502 16-25 (41)
457 1cja_A Protein (actin-fragmin 43.6 1.2E+02 0.0041 31.7 10.4 137 599-749 75-238 (342)
458 2ks1_B Epidermal growth factor 42.8 29 0.00099 24.3 3.8 32 489-520 13-44 (44)
459 1iij_A ERBB-2 receptor protein 41.1 11 0.00036 25.0 1.3 18 491-509 9-26 (35)
460 2l2t_A Receptor tyrosine-prote 38.4 27 0.00091 24.5 3.0 32 489-520 12-43 (44)
461 2lz0_A Uncharacterized protein 31.4 1.1E+02 0.0036 25.7 6.5 47 126-174 7-53 (100)
462 2lz0_A Uncharacterized protein 29.7 61 0.0021 27.2 4.7 39 110-149 15-53 (100)
463 3ls8_A Phosphatidylinositol 3- 28.1 3.5E+02 0.012 30.9 11.9 86 654-747 402-501 (614)
464 2l8s_A Integrin alpha-1; trans 28.0 45 0.0015 24.4 2.9 22 490-511 10-31 (54)
465 2knc_A Integrin alpha-IIB; tra 27.1 70 0.0024 23.5 3.8 22 490-511 13-34 (54)
466 2klu_A T-cell surface glycopro 24.3 65 0.0022 24.4 3.2 29 492-520 13-43 (70)
No 1
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=3.6e-52 Score=454.91 Aligned_cols=261 Identities=31% Similarity=0.516 Sum_probs=209.1
Q ss_pred cCCcccceecccCceEEEEEEEc------CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCce
Q 002238 593 NNFSEENILGRGGFGTVYKGELH------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEK 666 (948)
Q Consensus 593 ~~~~~~~~lg~G~fg~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 666 (948)
++|.+.++||+|+||+||+|+++ +++.||||+++.. .....++|.+|++++++++|||||+++|+|.+++..
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~ 118 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--SESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPL 118 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence 46777889999999999999864 4788999999754 556678899999999999999999999999999999
Q ss_pred EEEEEecCCCChhHHHHhhhh----------cCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCC
Q 002238 667 LLVFEYMPQGTLSRHIFNWAE----------EGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM 736 (948)
Q Consensus 667 ~lv~e~~~~gsL~~~l~~~~~----------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~ 736 (948)
+|||||+++|+|.++++.... ....+++|.++++|+.|||+||+|||+ ++||||||||+|||+++++
T Consensus 119 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLKp~NILl~~~~ 195 (329)
T 4aoj_A 119 LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNCLVGQGL 195 (329)
T ss_dssp EEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTT
T ss_pred EEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHhhEEECCCC
Confidence 999999999999999965321 123579999999999999999999997 8999999999999999999
Q ss_pred CeEEeecCCceecCCCC-CceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchhhhhHHHH
Q 002238 737 RAKVADFGLVRLAPEGK-GSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDESQPEESMHLVTW 814 (948)
Q Consensus 737 ~~kl~DfGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~ 814 (948)
.+||+|||+|+...... ....+...||+.|||||++.+..++.++|||||||++|||+| |+.||.+....+....+
T Consensus 196 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i-- 273 (329)
T 4aoj_A 196 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCI-- 273 (329)
T ss_dssp EEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHH--
T ss_pred cEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHH--
Confidence 99999999998654332 223345679999999999999999999999999999999999 89999876654432222
Q ss_pred HHHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhh
Q 002238 815 FRRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVE 876 (948)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~ 876 (948)
..- . .+.. . ...+.++.+++.+||+.||++||||+||++.|+.+.+
T Consensus 274 -~~g---~-------~~~~--p---~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~ 319 (329)
T 4aoj_A 274 -TQG---R-------ELER--P---RACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 319 (329)
T ss_dssp -HHT---C-------CCCC--C---TTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred -HcC---C-------CCCC--c---ccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence 110 0 0011 1 1223468899999999999999999999999999865
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.2e-52 Score=452.11 Aligned_cols=262 Identities=29% Similarity=0.488 Sum_probs=214.7
Q ss_pred hcCCcccceecccCceEEEEEEEc------CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCc
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNE 665 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 665 (948)
.++|.+.+.||+|+||+||+|++. ++..||||+++.. .....++|.+|++++++++|||||+++|+|.+++.
T Consensus 12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~ 89 (299)
T 4asz_A 12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP 89 (299)
T ss_dssp GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC--ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCE
Confidence 356888899999999999999864 4788999999754 55567889999999999999999999999999999
Q ss_pred eEEEEEecCCCChhHHHHhhh--------hcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCC
Q 002238 666 KLLVFEYMPQGTLSRHIFNWA--------EEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR 737 (948)
Q Consensus 666 ~~lv~e~~~~gsL~~~l~~~~--------~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~ 737 (948)
.+|||||+++|+|.++++... ......++|.++++|+.|||+||+|||+ ++||||||||+|||+++++.
T Consensus 90 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDlKp~NILl~~~~~ 166 (299)
T 4asz_A 90 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLL 166 (299)
T ss_dssp EEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGC
T ss_pred EEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCccCHhhEEECCCCc
Confidence 999999999999999996532 1223579999999999999999999997 89999999999999999999
Q ss_pred eEEeecCCceecCCCCCc-eeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchhhhhHHHHH
Q 002238 738 AKVADFGLVRLAPEGKGS-IETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDESQPEESMHLVTWF 815 (948)
Q Consensus 738 ~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~ 815 (948)
+||+|||+|+........ ......||++|||||++.+..|+.++|||||||++|||+| |+.||.+....+....+
T Consensus 167 ~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i--- 243 (299)
T 4asz_A 167 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECI--- 243 (299)
T ss_dssp EEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH---
T ss_pred EEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH---
Confidence 999999999865433222 2233569999999999999999999999999999999999 89999887654432222
Q ss_pred HHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhh
Q 002238 816 RRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVE 876 (948)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~ 876 (948)
.. +... .. ....+.++.+++.+||+.||++|||+++|.+.|+++.+
T Consensus 244 ~~-----~~~~-----~~-----p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~ 289 (299)
T 4asz_A 244 TQ-----GRVL-----QR-----PRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAK 289 (299)
T ss_dssp HH-----TCCC-----CC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred Hc-----CCCC-----CC-----CccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 11 1000 00 11233468899999999999999999999999998764
No 3
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=5.8e-52 Score=446.58 Aligned_cols=263 Identities=25% Similarity=0.447 Sum_probs=208.7
Q ss_pred hcCCcccceecccCceEEEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFE 671 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 671 (948)
.++|++.+.||+|+||+||+|+++ ..||||+++.........++|.+|++++++++|||||+++|+|.+ +..+||||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence 356788899999999999999875 369999998665566677899999999999999999999998864 56899999
Q ss_pred ecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceecCC
Q 002238 672 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE 751 (948)
Q Consensus 672 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~~~ 751 (948)
|+++|+|.++++. ....++|.++++|+.|||+||+|||+ ++||||||||+|||+++++.+||+|||+|+....
T Consensus 112 y~~gGsL~~~l~~----~~~~l~~~~~~~i~~qia~gL~yLH~---~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~ 184 (307)
T 3omv_A 112 WCEGSSLYKHLHV----QETKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp CCSSCBHHHHHHT----SCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCSSSEEEETTEEEEECCCSSCBC---
T ss_pred cCCCCCHHHHHhh----cCCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCccCHHHEEECCCCcEEEeeccCceeccc
Confidence 9999999999853 23579999999999999999999997 8999999999999999999999999999986543
Q ss_pred CC-CceeeeecccccccCceeccc---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCcccccc
Q 002238 752 GK-GSIETRIAGTFGYLAPEYAVT---GRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHK 827 (948)
Q Consensus 752 ~~-~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 827 (948)
.. .......+||+.|||||++.+ +.|+.++|||||||++|||+||+.||.+......... .+.. +
T Consensus 185 ~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~--~~~~-----~---- 253 (307)
T 3omv_A 185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIF--MVGR-----G---- 253 (307)
T ss_dssp ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHH--HHHT-----T----
T ss_pred CCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHH--HHhc-----C----
Confidence 32 223445689999999999864 4589999999999999999999999987654332111 1110 0
Q ss_pred ccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhh
Q 002238 828 AIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVEL 877 (948)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~ 877 (948)
...|.+. ......+.++.+++.+||+.||++||||+||++.|+.+...
T Consensus 254 ~~~p~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~ 301 (307)
T 3omv_A 254 YASPDLS--KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp CCCCCST--TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred CCCCCcc--cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcc
Confidence 1111111 11122345688999999999999999999999999887643
No 4
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=7.8e-52 Score=447.86 Aligned_cols=260 Identities=23% Similarity=0.390 Sum_probs=211.5
Q ss_pred cCCcccceecccCceEEEEEEEc------CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCce
Q 002238 593 NNFSEENILGRGGFGTVYKGELH------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEK 666 (948)
Q Consensus 593 ~~~~~~~~lg~G~fg~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 666 (948)
..++..+.||+|+||+||+|++. +++.||||+++... .....++|.+|+.++++++|||||+++|+|.+++..
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~-~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~ 104 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPL 104 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C-CC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc-ChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEE
Confidence 34566788999999999999863 46889999997542 344567899999999999999999999999999999
Q ss_pred EEEEEecCCCChhHHHHhhhhc-----------CCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCC
Q 002238 667 LLVFEYMPQGTLSRHIFNWAEE-----------GLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD 735 (948)
Q Consensus 667 ~lv~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~ 735 (948)
+|||||+++|+|.++++..... ....++|.++++|+.|||+||+|||+ ++||||||||+|||++++
T Consensus 105 ~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLK~~NILl~~~ 181 (308)
T 4gt4_A 105 SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS---HHVVHKDLATRNVLVYDK 181 (308)
T ss_dssp EEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGG
T ss_pred EEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCccccceEECCC
Confidence 9999999999999999653211 12469999999999999999999997 899999999999999999
Q ss_pred CCeEEeecCCceecCCCC-CceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchhhhhHHH
Q 002238 736 MRAKVADFGLVRLAPEGK-GSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDESQPEESMHLVT 813 (948)
Q Consensus 736 ~~~kl~DfGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~ 813 (948)
+.+||+|||+|+...... ....+...||++|||||++.++.|+.++|||||||++|||+| |+.||.+....+....+
T Consensus 182 ~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i- 260 (308)
T 4gt4_A 182 LNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMI- 260 (308)
T ss_dssp GCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHH-
T ss_pred CCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHH-
Confidence 999999999998553322 223345679999999999999999999999999999999999 89999887654432221
Q ss_pred HHHHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhh
Q 002238 814 WFRRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSL 874 (948)
Q Consensus 814 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~ 874 (948)
.. +... +. ....+.++.+++.+||+.||++||+|+||++.|+..
T Consensus 261 --~~-----~~~~-------~~---p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 261 --RN-----RQVL-------PC---PDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp --HT-----TCCC-------CC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred --Hc-----CCCC-------CC---cccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 11 1100 00 112345688999999999999999999999999764
No 5
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=6e-51 Score=444.58 Aligned_cols=253 Identities=23% Similarity=0.387 Sum_probs=207.7
Q ss_pred cCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEEEE
Q 002238 593 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFE 671 (948)
Q Consensus 593 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 671 (948)
++|++.+.||+|+||+||+|+.+ +|+.||||++..........+.+.+|++++++++|||||++++++.+++..|||||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 68999999999999999999875 79999999998776666677889999999999999999999999999999999999
Q ss_pred ecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceecCC
Q 002238 672 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE 751 (948)
Q Consensus 672 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~~~ 751 (948)
|++||+|.+++.. .....+++.+++.|+.||+.||+|||+ ++||||||||+|||+++++.+||+|||+|+....
T Consensus 104 y~~gg~L~~~i~~---~~~~~~~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 177 (350)
T 4b9d_A 104 YCEGGDLFKRINA---QKGVLFQEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS 177 (350)
T ss_dssp CCTTCBHHHHHHH---TTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCEETTCCGGGEEECTTCCEEECSTTEESCCCH
T ss_pred CCCCCcHHHHHHH---cCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCCEEEcccccceeecC
Confidence 9999999999854 333567899999999999999999997 8999999999999999999999999999986543
Q ss_pred CCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCccccccccCc
Q 002238 752 GKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHKAIDP 831 (948)
Q Consensus 752 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 831 (948)
.. ...+..+||+.|||||++.+..|+.++|||||||++|||+||+.||.+....+....+ .. ..+. +
T Consensus 178 ~~-~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i------~~--~~~~----~ 244 (350)
T 4b9d_A 178 TV-ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKI------IS--GSFP----P 244 (350)
T ss_dssp HH-HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH------HH--TCCC----C
T ss_pred Cc-ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH------Hc--CCCC----C
Confidence 21 1234567999999999999999999999999999999999999999876544332211 11 1110 0
Q ss_pred ccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 832 TIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 832 ~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
+ ......++.+++.+||+.||++|||++|+++.
T Consensus 245 -~-----~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 245 -V-----SLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp -C-----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred -C-----CccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1 01123458899999999999999999999874
No 6
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.7e-50 Score=440.37 Aligned_cols=250 Identities=23% Similarity=0.421 Sum_probs=209.9
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 670 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 670 (948)
.+.|+..+.||+|+||.||+|+.+ +|+.||||++.... ....+.+.+|+++|++++|||||++++++.+++..||||
T Consensus 73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~--~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivm 150 (346)
T 4fih_A 73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 150 (346)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG--CSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCc--hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 357999999999999999999875 79999999997642 333466899999999999999999999999999999999
Q ss_pred EecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceecC
Q 002238 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 750 (948)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~~ 750 (948)
||++||+|.+++.. ..+++.++..++.||+.||+|||+ ++||||||||+|||++.++.+||+|||+|+...
T Consensus 151 Ey~~gg~L~~~l~~------~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~ 221 (346)
T 4fih_A 151 EFLEGGALTDIVTH------TRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 221 (346)
T ss_dssp CCCTTEEHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred eCCCCCcHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEECCCCCEEEecCcCceecC
Confidence 99999999998843 468999999999999999999997 899999999999999999999999999999765
Q ss_pred CCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCccccccccC
Q 002238 751 EGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHKAID 830 (948)
Q Consensus 751 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 830 (948)
... ...+..+||+.|||||++.+..|+.++||||+||++|||++|++||.+....+....+ .. ...
T Consensus 222 ~~~-~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i---~~----------~~~ 287 (346)
T 4fih_A 222 KEV-PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI---RD----------NLP 287 (346)
T ss_dssp SSS-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH---HH----------SSC
T ss_pred CCC-CcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH---Hc----------CCC
Confidence 433 2345678999999999999999999999999999999999999999876554432221 11 011
Q ss_pred cccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 831 PTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 831 ~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
+.+. .......++.+++.+|++.||++|||++|+++
T Consensus 288 ~~~~---~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 288 PRLK---NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp CCCS---CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCCC---ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1111 11122346889999999999999999999876
No 7
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.7e-50 Score=439.14 Aligned_cols=255 Identities=22% Similarity=0.291 Sum_probs=208.5
Q ss_pred cCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEEEE
Q 002238 593 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFE 671 (948)
Q Consensus 593 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 671 (948)
+.|+..++||+|+||.||+|+++ +|+.||||+++.... ..+|+.++++++|||||++++++.+++..|||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmE 130 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFME 130 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 46788899999999999999875 799999999986422 2479999999999999999999999999999999
Q ss_pred ecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCC-CeEEeecCCceecC
Q 002238 672 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM-RAKVADFGLVRLAP 750 (948)
Q Consensus 672 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~-~~kl~DfGla~~~~ 750 (948)
|++||+|.+++.. ...+++.++..++.||+.||+|||+ ++||||||||+|||++.++ .+||+|||+|+...
T Consensus 131 y~~gg~L~~~l~~-----~~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~ 202 (336)
T 4g3f_A 131 LLEGGSLGQLIKQ-----MGCLPEDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQ 202 (336)
T ss_dssp CCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-
T ss_pred ccCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEeCCCCEEEEeeCCCCeEcc
Confidence 9999999999954 1479999999999999999999997 8999999999999999987 69999999999765
Q ss_pred CCCCc----eeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCccccc
Q 002238 751 EGKGS----IETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFH 826 (948)
Q Consensus 751 ~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 826 (948)
..... .....+||+.|||||++.+..|+.++|||||||++|||+||++||.+....+....+. .....+.
T Consensus 203 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~------~~~~~~~ 276 (336)
T 4g3f_A 203 PDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIA------SEPPPIR 276 (336)
T ss_dssp -----------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHH------HSCCGGG
T ss_pred CCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHH------cCCCCch
Confidence 43211 1233579999999999999999999999999999999999999998766544322211 1111111
Q ss_pred cccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhhh
Q 002238 827 KAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELW 878 (948)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~~ 878 (948)
.+. ......+.+++.+|++.||++|||+.|+++.|....+..
T Consensus 277 -~~~---------~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~ 318 (336)
T 4g3f_A 277 -EIP---------PSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEV 318 (336)
T ss_dssp -GSC---------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred -hcC---------ccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhh
Confidence 111 122346889999999999999999999999998877643
No 8
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=5.2e-50 Score=435.08 Aligned_cols=269 Identities=21% Similarity=0.303 Sum_probs=205.2
Q ss_pred cCCcccceecccCceEEEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC----ceEE
Q 002238 593 NNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGN----EKLL 668 (948)
Q Consensus 593 ~~~~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~----~~~l 668 (948)
++|.+.+.||+|+||+||+|+++ |+.||||++... ......++.|+..+.+++|||||+++++|.+++ +.+|
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~---~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~l 78 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECcc---chhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEE
Confidence 46788899999999999999985 899999998653 222233445666677889999999999998754 5799
Q ss_pred EEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcc-----CCCeeecCCCCccEEEcCCCCeEEeec
Q 002238 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLA-----HQSFIHRDLKPSNILLGDDMRAKVADF 743 (948)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-----~~~ivHrDik~~Nill~~~~~~kl~Df 743 (948)
||||+++|+|.++++. ..++|..+++++.|+++||+|||+.+ +++||||||||+|||++.++.+||+||
T Consensus 79 V~Ey~~~gsL~~~l~~------~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DF 152 (303)
T 3hmm_A 79 VSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp EEECCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCC
T ss_pred EecCCCCCcHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeC
Confidence 9999999999999954 46899999999999999999999731 349999999999999999999999999
Q ss_pred CCceecCCCCCc---eeeeecccccccCceecccC------CCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhh-----
Q 002238 744 GLVRLAPEGKGS---IETRIAGTFGYLAPEYAVTG------RVTTKVDVFSFGVILMELITGRKALDESQPEESM----- 809 (948)
Q Consensus 744 Gla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~----- 809 (948)
|+|+........ .....+||++|||||++.+. .++.++|||||||++|||+||++|+......+..
T Consensus 153 Gla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~ 232 (303)
T 3hmm_A 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 232 (303)
T ss_dssp TTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTS
T ss_pred CCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcc
Confidence 999866544322 22346799999999998764 4678999999999999999998877543221100
Q ss_pred ---hHHHHHHHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhh
Q 002238 810 ---HLVTWFRRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVE 876 (948)
Q Consensus 810 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~ 876 (948)
.......... ..+..+|.++......+.+..+.+++.+||+.||++||||.||++.|+++.+
T Consensus 233 ~~~~~~~~~~~~~-----~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~ 297 (303)
T 3hmm_A 233 PSDPSVEEMRKVV-----CEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp CSSCCHHHHHHHH-----TTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cccchHHHHHHHH-----hcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence 0011111111 1122334444333334556678999999999999999999999999999865
No 9
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=7.9e-50 Score=426.84 Aligned_cols=246 Identities=26% Similarity=0.407 Sum_probs=200.0
Q ss_pred cccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEe----CCceEEEE
Q 002238 596 SEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLD----GNEKLLVF 670 (948)
Q Consensus 596 ~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~~lv~ 670 (948)
+..+.||+|+||.||+|.+. +++.||||++..........+.|.+|++++++++|||||++++++.+ +...||||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 56678999999999999875 68999999998766666677889999999999999999999999865 34579999
Q ss_pred EecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCC--eeecCCCCccEEEc-CCCCeEEeecCCce
Q 002238 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQS--FIHRDLKPSNILLG-DDMRAKVADFGLVR 747 (948)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivHrDik~~Nill~-~~~~~kl~DfGla~ 747 (948)
||+++|+|.+++.. ...+++..+..++.||+.||+|||+ ++ ||||||||+|||++ .++.+||+|||+|+
T Consensus 109 Ey~~gg~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~ylH~---~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~ 180 (290)
T 3fpq_A 109 ELMTSGTLKTYLKR-----FKVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp ECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCCCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred eCCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCEEecccChhheeEECCCCCEEEEeCcCCE
Confidence 99999999999954 2578999999999999999999997 55 99999999999998 47899999999998
Q ss_pred ecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCcccccc
Q 002238 748 LAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHK 827 (948)
Q Consensus 748 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 827 (948)
..... .....+||+.|||||++.+ .|+.++|||||||++|||+||+.||.+...... +. ..+.. +....
T Consensus 181 ~~~~~---~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~--~~---~~i~~--~~~~~ 249 (290)
T 3fpq_A 181 LKRAS---FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ--IY---RRVTS--GVKPA 249 (290)
T ss_dssp GCCTT---SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH--HH---HHHTT--TCCCG
T ss_pred eCCCC---ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHH--HH---HHHHc--CCCCC
Confidence 64332 3455789999999998864 699999999999999999999999976543221 11 11111 10000
Q ss_pred ccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 828 AIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
.++ .....++.+++.+||+.||++|||++|+++
T Consensus 250 ~~~---------~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 250 SFD---------KVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp GGG---------GCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCC---------ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 111 112235889999999999999999999876
No 10
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=5.5e-50 Score=429.66 Aligned_cols=251 Identities=23% Similarity=0.365 Sum_probs=210.6
Q ss_pred cCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEEE
Q 002238 593 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 670 (948)
Q Consensus 593 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 670 (948)
++|++.+.||+|+||+||+|+.+ +|+.||||++.+... .....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 57999999999999999999875 799999999976432 2344678999999999999999999999999999999999
Q ss_pred EecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceecC
Q 002238 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 750 (948)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~~ 750 (948)
||++||+|.+++.. .+.+++.++..++.||+.||+|||+ ++||||||||+|||++.++.+||+|||+|+...
T Consensus 112 Ey~~gG~L~~~i~~-----~~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~ 183 (311)
T 4aw0_A 112 SYAKNGELLKYIRK-----IGSFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 183 (311)
T ss_dssp CCCTTEEHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred ecCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEEcCCCCEEEEEcCCceecC
Confidence 99999999999854 2578999999999999999999997 899999999999999999999999999999765
Q ss_pred CC-CCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCcccccccc
Q 002238 751 EG-KGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHKAI 829 (948)
Q Consensus 751 ~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 829 (948)
.. ........+||+.|||||++.+..|+.++||||+||++|||+||+.||.+....+.... +...+..+.
T Consensus 184 ~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~------i~~~~~~~p--- 254 (311)
T 4aw0_A 184 PESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAK------IIKLEYDFP--- 254 (311)
T ss_dssp TTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH------HHHTCCCCC---
T ss_pred CCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH------HHcCCCCCC---
Confidence 43 23334567899999999999999999999999999999999999999987654433221 111111111
Q ss_pred CcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 830 DPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 830 ~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
.. ...++.+++.+|++.||++||+++|+...
T Consensus 255 -~~---------~s~~~~dli~~lL~~dp~~R~t~~e~~~~ 285 (311)
T 4aw0_A 255 -EK---------FFPKARDLVEKLLVLDATKRLGCEEMEGY 285 (311)
T ss_dssp -TT---------CCHHHHHHHHHHSCSSGGGSTTSGGGTCH
T ss_pred -cc---------cCHHHHHHHHHHccCCHhHCcChHHHcCC
Confidence 11 12357899999999999999999987543
No 11
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=3e-49 Score=435.14 Aligned_cols=268 Identities=26% Similarity=0.401 Sum_probs=216.9
Q ss_pred HhhcCCcccceecccCceEEEEEEEcC------CcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCC-CceeeEEeEEEe
Q 002238 590 NVTNNFSEENILGRGGFGTVYKGELHD------GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRH-RHLVALLGHCLD 662 (948)
Q Consensus 590 ~~~~~~~~~~~lg~G~fg~Vy~~~~~~------g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H-~niv~l~~~~~~ 662 (948)
...++|++.+.||+|+||+||+|++.. ++.||||++.... .....++|.+|++++.+++| ||||+++|+|.+
T Consensus 61 i~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~-~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~ 139 (353)
T 4ase_A 61 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGACTK 139 (353)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECC
T ss_pred ecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc-ChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEe
Confidence 345789999999999999999998652 3689999997642 44556789999999999965 899999999976
Q ss_pred C-CceEEEEEecCCCChhHHHHhhhhc-----------CCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccE
Q 002238 663 G-NEKLLVFEYMPQGTLSRHIFNWAEE-----------GLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNI 730 (948)
Q Consensus 663 ~-~~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Ni 730 (948)
. +..++|||||++|+|.++++..... ....++|.+++.++.|||+||+|||+ ++||||||||+||
T Consensus 140 ~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~---~~iiHRDLK~~NI 216 (353)
T 4ase_A 140 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNI 216 (353)
T ss_dssp TTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGE
T ss_pred cCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhh---CCeecCccCccce
Confidence 4 5689999999999999999763321 13468999999999999999999998 8999999999999
Q ss_pred EEcCCCCeEEeecCCceecCCCCCc-eeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchhh
Q 002238 731 LLGDDMRAKVADFGLVRLAPEGKGS-IETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDESQPEES 808 (948)
Q Consensus 731 ll~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~ 808 (948)
|+++++.+||+|||+|+........ ......||+.|||||++.+..|+.++|||||||++|||+| |+.||.+....+.
T Consensus 217 Ll~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~ 296 (353)
T 4ase_A 217 LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 296 (353)
T ss_dssp EECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH
T ss_pred eeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHH
Confidence 9999999999999999966544332 3345679999999999999999999999999999999998 9999987654332
Q ss_pred hhHHHHHHHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhhh
Q 002238 809 MHLVTWFRRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELW 878 (948)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~~ 878 (948)
. ...+.. + ..+.. .. ..+.++.+++.+||+.||++|||++||+++|+.+++..
T Consensus 297 ~--~~~i~~-----g-----~~~~~--p~---~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~ 349 (353)
T 4ase_A 297 F--CRRLKE-----G-----TRMRA--PD---YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 349 (353)
T ss_dssp H--HHHHHH-----T-----CCCCC--CT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred H--HHHHHc-----C-----CCCCC--Cc---cCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHh
Confidence 1 111111 0 00111 11 12346889999999999999999999999999987643
No 12
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=2.5e-49 Score=441.65 Aligned_cols=250 Identities=23% Similarity=0.420 Sum_probs=210.1
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 670 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 670 (948)
.++|+..+.||+|+||.||+|+.+ +|+.||||++... .....+.+.+|+.+|+.++|||||++++++.+++..||||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~--~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVm 227 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLR--KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 227 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEST--TCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEecc--chhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEE
Confidence 467999999999999999999875 7999999999765 3334567899999999999999999999999999999999
Q ss_pred EecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceecC
Q 002238 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 750 (948)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~~ 750 (948)
|||+||+|.+++.. ..+++.++..|+.||+.||+|||+ ++||||||||+|||++.++.+||+|||+|+...
T Consensus 228 Ey~~gG~L~~~i~~------~~l~e~~~~~~~~qil~aL~ylH~---~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~ 298 (423)
T 4fie_A 228 EFLEGGALTDIVTH------TRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 298 (423)
T ss_dssp ECCTTEEHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSTTTEEECTTCCEEECCCTTCEECC
T ss_pred eCCCCCcHHHHHhc------cCCCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEecCccceECC
Confidence 99999999998843 468999999999999999999997 899999999999999999999999999999765
Q ss_pred CCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCccccccccC
Q 002238 751 EGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHKAID 830 (948)
Q Consensus 751 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 830 (948)
... ......+||+.|||||++.+..|+.++|||||||++|||++|+.||.+....+....+ ... ..
T Consensus 299 ~~~-~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i---~~~----------~~ 364 (423)
T 4fie_A 299 KEV-PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI---RDN----------LP 364 (423)
T ss_dssp SSC-CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH---HHS----------CC
T ss_pred CCC-ccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH---HcC----------CC
Confidence 433 2345678999999999999999999999999999999999999999876654432222 110 11
Q ss_pred cccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 831 PTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 831 ~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
+.+. .......++.+|+.+||+.||++|||++|+++
T Consensus 365 ~~~~---~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 365 PRLK---NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp CCCS---CTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCCc---ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1111 01112345889999999999999999999876
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=7.1e-49 Score=415.59 Aligned_cols=247 Identities=26% Similarity=0.393 Sum_probs=192.0
Q ss_pred cCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEEE
Q 002238 593 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS-GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 670 (948)
Q Consensus 593 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 670 (948)
++|++.+.||+|+||+||+|+.+ +|+.||||++.+.... ....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 68999999999999999999864 7999999999765433 334567999999999999999999999999999999999
Q ss_pred EecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceecC
Q 002238 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 750 (948)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~~ 750 (948)
||+ +|+|.+++.. ...+++.++..++.||+.||+|||+ ++|+||||||+|||+++++.+||+|||+|+...
T Consensus 93 Ey~-~g~L~~~l~~-----~~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~ 163 (275)
T 3hyh_A 93 EYA-GNELFDYIVQ-----RDKMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT 163 (275)
T ss_dssp ECC-CEEHHHHHHH-----SCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTCCEEECCSSCC----
T ss_pred eCC-CCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCChHHeEECCCCCEEEeecCCCeecC
Confidence 999 6899988843 2579999999999999999999997 899999999999999999999999999998654
Q ss_pred CCCCceeeeecccccccCceecccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCcccccccc
Q 002238 751 EGKGSIETRIAGTFGYLAPEYAVTGRV-TTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHKAI 829 (948)
Q Consensus 751 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 829 (948)
+.. .....+||+.|||||++.+..+ +.++||||+||++|||+||+.||.+....+... .+......+.
T Consensus 164 ~~~--~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~------~i~~~~~~~p--- 232 (275)
T 3hyh_A 164 DGN--FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFK------NISNGVYTLP--- 232 (275)
T ss_dssp -------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH------HHHHTCCCCC---
T ss_pred CCC--ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHH------HHHcCCCCCC---
Confidence 432 3345689999999999998876 589999999999999999999998755433211 1111111111
Q ss_pred CcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 830 DPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 830 ~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
. ....++.+++.+|++.||++|||++|+++
T Consensus 233 -~---------~~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 233 -K---------FLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp -T---------TSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred -C---------CCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 1 11245789999999999999999999987
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=3e-49 Score=424.25 Aligned_cols=245 Identities=24% Similarity=0.356 Sum_probs=197.5
Q ss_pred cCCcccceecccCceEEEEEEEc----CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEE
Q 002238 593 NNFSEENILGRGGFGTVYKGELH----DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLL 668 (948)
Q Consensus 593 ~~~~~~~~lg~G~fg~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 668 (948)
++|++.+.||+|+||+||+|+.. +++.||||++++..........+.+|++++++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 57999999999999999999762 47899999997654444445678999999999999999999999999999999
Q ss_pred EEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCcee
Q 002238 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 748 (948)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~ 748 (948)
||||++||+|.+++.. ...+++.++..++.||+.||+|||+ ++||||||||+|||++.++.+||+|||+|+.
T Consensus 104 vmEy~~gg~L~~~l~~-----~~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~ 175 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSK-----EVMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKE 175 (304)
T ss_dssp EECCCTTCEEHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTSCEEEESSEEEEC
T ss_pred EEEcCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHeEEcCCCCEEeccccccee
Confidence 9999999999999854 2578999999999999999999997 8999999999999999999999999999986
Q ss_pred cCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCccccccc
Q 002238 749 APEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHKA 828 (948)
Q Consensus 749 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 828 (948)
...... .....+||+.|||||++.+..|+.++||||+||++|||+||+.||.+....+....+ ......+.
T Consensus 176 ~~~~~~-~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i------~~~~~~~p-- 246 (304)
T 3ubd_A 176 SIDHEK-KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMI------LKAKLGMP-- 246 (304)
T ss_dssp -----C-CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH------HHCCCCCC--
T ss_pred ccCCCc-cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHH------HcCCCCCC--
Confidence 544322 334568999999999999999999999999999999999999999876654432221 11111111
Q ss_pred cCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChH
Q 002238 829 IDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMG 865 (948)
Q Consensus 829 ~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ 865 (948)
. ....++.+++.+|++.||++||++.
T Consensus 247 --~---------~~s~~~~~li~~~L~~dP~~R~ta~ 272 (304)
T 3ubd_A 247 --Q---------FLSPEAQSLLRMLFKRNPANRLGAG 272 (304)
T ss_dssp --T---------TSCHHHHHHHHHHTCSSGGGSTTCS
T ss_pred --C---------cCCHHHHHHHHHHcccCHHHCCCCC
Confidence 1 1224588999999999999999863
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=5.4e-47 Score=409.02 Aligned_cols=251 Identities=28% Similarity=0.414 Sum_probs=189.6
Q ss_pred cCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC-------
Q 002238 593 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGN------- 664 (948)
Q Consensus 593 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------- 664 (948)
++|++.+.||+|+||+||+|+.+ +|+.||||+++... .....+.+.+|++++++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS-SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 45899999999999999999875 79999999997642 3445678999999999999999999999987644
Q ss_pred -----ceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeE
Q 002238 665 -----EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAK 739 (948)
Q Consensus 665 -----~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~k 739 (948)
..|+||||+++|+|.+++... ......++..++.|+.||+.||+|||+ ++||||||||+|||++.++.+|
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l~~~--~~~~~~~~~~~~~i~~qi~~al~ylH~---~~IiHRDlKp~NILl~~~~~vK 158 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWMNGR--CTIEERERSVCLHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVK 158 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHHHTC--CSGGGSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEE
T ss_pred cCCCcEEEEEEecCCCCcHHHHHHhc--CCCChhHHHHHHHHHHHHHHHHHHHHH---CcCccccCcHHHeEECCCCcEE
Confidence 368999999999999998542 112345677889999999999999998 8999999999999999999999
Q ss_pred EeecCCceecCCCCCc-----------eeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhh
Q 002238 740 VADFGLVRLAPEGKGS-----------IETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEES 808 (948)
Q Consensus 740 l~DfGla~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~ 808 (948)
|+|||+|+........ ..+..+||+.|||||++.+..|+.++|||||||++|||++ ||.... +.
T Consensus 159 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~--~~ 233 (299)
T 4g31_A 159 VGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM--ER 233 (299)
T ss_dssp ECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH--HH
T ss_pred EccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc--HH
Confidence 9999999865443211 1234679999999999999999999999999999999996 775321 11
Q ss_pred hhHHHHHHHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 809 MHLVTWFRRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
......+.. ..+ ............+++.+|++.||++|||+.|+++
T Consensus 234 ~~~~~~~~~-----~~~----------p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 234 VRTLTDVRN-----LKF----------PPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHHHHHHT-----TCC----------CHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHhc-----CCC----------CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111111111 000 1111222345678999999999999999999876
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.4e-45 Score=411.33 Aligned_cols=268 Identities=21% Similarity=0.336 Sum_probs=207.4
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEe------CC
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLD------GN 664 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~------~~ 664 (948)
.++|++.+.||+|+||.||+|+.+ +|+.||||+++.........+.+.+|+++|+.++|||||++++++.. .+
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 468999999999999999999875 79999999998765555666788999999999999999999998764 35
Q ss_pred ceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecC
Q 002238 665 EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 744 (948)
Q Consensus 665 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfG 744 (948)
..||||||++ |+|.+++.. .+.+++.++..++.||+.||+|||+ ++||||||||+|||++.++.+||+|||
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~-----~~~l~~~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NIl~~~~~~~Ki~DFG 203 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHS-----SQPLTLEHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFG 203 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTS-----SSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEEEeCCC-CCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CcCcCCCcCccccccCCCCCEEEeecc
Confidence 6899999995 689888832 3679999999999999999999997 899999999999999999999999999
Q ss_pred CceecCCCC---CceeeeecccccccCceecccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhc
Q 002238 745 LVRLAPEGK---GSIETRIAGTFGYLAPEYAVTG-RVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHL 820 (948)
Q Consensus 745 la~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 820 (948)
+|+...... .......+||+.|||||++.+. .++.++||||+||++|||++|++||.+....+....+..... .
T Consensus 204 la~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g--~ 281 (398)
T 4b99_A 204 MARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLG--T 281 (398)
T ss_dssp TCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHC--C
T ss_pred eeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcC--C
Confidence 998654321 2234457899999999998875 569999999999999999999999988765544333321111 0
Q ss_pred Ccccccc------------ccCccc--CCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 821 SKDSFHK------------AIDPTI--DLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 821 ~~~~~~~------------~~~~~~--~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
....... .+.+.. ...........++.+|+.+|+..||++|||+.|++++
T Consensus 282 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 282 PSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp CCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred CChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 0000000 000000 0000011123468899999999999999999998763
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=3.6e-45 Score=405.74 Aligned_cols=202 Identities=24% Similarity=0.404 Sum_probs=173.3
Q ss_pred HHHhhcCCcccceecccCceEEEEEEEc----CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEe
Q 002238 588 LRNVTNNFSEENILGRGGFGTVYKGELH----DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLD 662 (948)
Q Consensus 588 l~~~~~~~~~~~~lg~G~fg~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~ 662 (948)
+..+.++|++.+.||+|+||+||+|+.+ +++.||||++... ....++.+|+++++.+ +|||||++++++.+
T Consensus 16 ~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~----~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~ 91 (361)
T 4f9c_A 16 VPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT----SHPIRIAAELQCLTVAGGQDNVMGVKYCFRK 91 (361)
T ss_dssp SGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT----SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEE
T ss_pred cCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc----cCHHHHHHHHHHHHHhcCCCCCceEEEEEEE
Confidence 3356789999999999999999999753 4688999998653 2346788999999998 69999999999999
Q ss_pred CCceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCC-CCeEEe
Q 002238 663 GNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD-MRAKVA 741 (948)
Q Consensus 663 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~-~~~kl~ 741 (948)
.++.|+||||+++|+|.+++ +.+++.++..++.|++.||+|||+ ++||||||||+|||++.+ +.+||+
T Consensus 92 ~~~~~lvmE~~~g~~L~~~~--------~~l~~~~~~~~~~qll~al~ylH~---~gIiHRDiKPeNiLl~~~~~~~kl~ 160 (361)
T 4f9c_A 92 NDHVVIAMPYLEHESFLDIL--------NSLSFQEVREYMLNLFKALKRIHQ---FGIVHRDVKPSNFLYNRRLKKYALV 160 (361)
T ss_dssp TTEEEEEEECCCCCCHHHHH--------TTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEEC
T ss_pred CCEEEEEEeCCCcccHHHHH--------cCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCcCCHHHeEEeCCCCeEEEC
Confidence 99999999999999999887 358899999999999999999997 899999999999999876 799999
Q ss_pred ecCCceecCCCCC---------------------------ceeeeecccccccCceecccC-CCCchhhHHHHHHHHHHH
Q 002238 742 DFGLVRLAPEGKG---------------------------SIETRIAGTFGYLAPEYAVTG-RVTTKVDVFSFGVILMEL 793 (948)
Q Consensus 742 DfGla~~~~~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv~l~el 793 (948)
|||+|+...+... ...+..+||+.|||||++.+. .|+.++||||+||++|||
T Consensus 161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~el 240 (361)
T 4f9c_A 161 DFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSL 240 (361)
T ss_dssp CCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHH
T ss_pred cCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHH
Confidence 9999986543221 112345799999999999875 589999999999999999
Q ss_pred HhCCCCCCCCC
Q 002238 794 ITGRKALDESQ 804 (948)
Q Consensus 794 ltg~~p~~~~~ 804 (948)
++|+.||....
T Consensus 241 l~G~~Pf~~~~ 251 (361)
T 4f9c_A 241 LSGRYPFYKAS 251 (361)
T ss_dssp HHTCSSSSCCS
T ss_pred HHCCCCCCCCC
Confidence 99999996554
No 18
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=3e-43 Score=414.19 Aligned_cols=252 Identities=22% Similarity=0.350 Sum_probs=210.7
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 670 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 670 (948)
.++|++.+.||+|+||.||+|+.+ +|+.||||++... .....+.+.+|+++|+.++|||||++++++.+++..||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~--~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~ 233 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP--HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIY 233 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--SHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEecc--chhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence 468999999999999999999875 7999999999764 3445678999999999999999999999999999999999
Q ss_pred EecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCC--CCeEEeecCCcee
Q 002238 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD--MRAKVADFGLVRL 748 (948)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~--~~~kl~DfGla~~ 748 (948)
||++||+|.+++.. ....+++.++..++.||+.||+|||+ ++|+||||||+|||++.+ +.+||+|||+|+.
T Consensus 234 E~~~gg~L~~~i~~----~~~~l~e~~~~~~~~qi~~al~ylH~---~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~ 306 (573)
T 3uto_A 234 EFMSGGELFEKVAD----EHNKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAH 306 (573)
T ss_dssp ECCCCCBHHHHHTC----TTSCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCSSCEE
T ss_pred eecCCCcHHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhccccCCCCCCEEEeeccceeE
Confidence 99999999988832 23579999999999999999999997 899999999999999854 7999999999997
Q ss_pred cCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCccccccc
Q 002238 749 APEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHKA 828 (948)
Q Consensus 749 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 828 (948)
..... .....+||+.|||||++.+..|+.++||||+||++|||++|++||.+....+....+ ......+...
T Consensus 307 ~~~~~--~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i------~~~~~~~~~~ 378 (573)
T 3uto_A 307 LDPKQ--SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNV------KSCDWNMDDS 378 (573)
T ss_dssp CCTTS--EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHH------HTTCCCCCSG
T ss_pred ccCCC--ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH------HhCCCCCCcc
Confidence 75433 345568999999999999999999999999999999999999999876654432221 1111111111
Q ss_pred cCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 829 IDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 829 ~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
.......++.+|+.+||+.||.+||++.|+++
T Consensus 379 ---------~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 379 ---------AFSGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp ---------GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ---------cccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11122345889999999999999999999876
No 19
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1.6e-43 Score=390.25 Aligned_cols=284 Identities=38% Similarity=0.702 Sum_probs=236.1
Q ss_pred HHHHHhhcCCcccceecccCceEEEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCc
Q 002238 586 QVLRNVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNE 665 (948)
Q Consensus 586 ~~l~~~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 665 (948)
.++..++++|+..+.||+|+||.||+|++++|+.||||++... .....+.+.+|+++++.++||||+++++++.+++.
T Consensus 32 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 109 (321)
T 2qkw_B 32 VDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPE--SSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNE 109 (321)
T ss_dssp SCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSC--CSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTC
T ss_pred HHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEeccc--ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCe
Confidence 3445578899999999999999999999888999999998754 34456789999999999999999999999999999
Q ss_pred eEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCC
Q 002238 666 KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGL 745 (948)
Q Consensus 666 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGl 745 (948)
.++||||+++|+|.+++.... .....++|.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 110 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 185 (321)
T 2qkw_B 110 MILIYKYMENGNLKRHLYGSD-LPTMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGI 185 (321)
T ss_dssp CEEEEECCTTCBTGGGSSSSC-CCSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCSTTEEECTTCCEEECCCTT
T ss_pred EEEEEEcCCCCcHHHHHhccC-CCccccCHHHHHHHHHHHHHHHHHhcC---CCeecCCCCHHHEEECCCCCEEEeeccc
Confidence 999999999999999885421 122468999999999999999999997 8999999999999999999999999999
Q ss_pred ceecCCCC-CceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCccc
Q 002238 746 VRLAPEGK-GSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDS 824 (948)
Q Consensus 746 a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 824 (948)
++...... ........||+.|+|||++.+..++.++||||||+++|||++|+.||....+.+......|...... ...
T Consensus 186 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~ 264 (321)
T 2qkw_B 186 SKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHN-NGQ 264 (321)
T ss_dssp CEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHT-TTC
T ss_pred ccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccc-ccc
Confidence 98654322 2223445689999999999999999999999999999999999999988776665555555544332 333
Q ss_pred cccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhh
Q 002238 825 FHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVEL 877 (948)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~ 877 (948)
+...+++.+. ..........+.+++.+|++.||++||++.++++.|+.+.+.
T Consensus 265 ~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 265 LEQIVDPNLA-DKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp CCSSSSSSCT-TCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred HHHhcChhhc-cccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 4455555443 233456677899999999999999999999999999998753
No 20
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.6e-43 Score=411.82 Aligned_cols=250 Identities=23% Similarity=0.336 Sum_probs=200.1
Q ss_pred cCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCC-hhhHHHH---HHHHHHHHhcCCCceeeEEeEEEeCCceE
Q 002238 593 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS-GKGLTEF---KSEIAVLTKVRHRHLVALLGHCLDGNEKL 667 (948)
Q Consensus 593 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~---~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 667 (948)
++|++.++||+|+||.||+|+.+ +|+.||||++.+.... ......+ ..++.+++.++|||||++++++.+.+..|
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 67999999999999999999875 7999999999764322 1122233 34466777789999999999999999999
Q ss_pred EEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCce
Q 002238 668 LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 747 (948)
Q Consensus 668 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~ 747 (948)
|||||++||+|.+++.. ...+++..+..++.||+.||+|||+ ++||||||||+|||++.+|.+||+|||+|+
T Consensus 269 lVmEy~~GGdL~~~l~~-----~~~l~E~~a~~y~~qIl~aL~yLH~---~gIiHRDLKPeNILld~~G~vKL~DFGlA~ 340 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLSQ-----HGVFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLAC 340 (689)
T ss_dssp EEECCCCSCBHHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEecCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHeEEeCCCCEEecccceee
Confidence 99999999999999954 2568999999999999999999997 899999999999999999999999999999
Q ss_pred ecCCCCCceeeeecccccccCceeccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCccccc
Q 002238 748 LAPEGKGSIETRIAGTFGYLAPEYAVT-GRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFH 826 (948)
Q Consensus 748 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 826 (948)
...... ....+||+.|||||++.+ ..|+.++|+||+||++|||++|++||.+....+...... ........+.
T Consensus 341 ~~~~~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~---~i~~~~~~~p 414 (689)
T 3v5w_A 341 DFSKKK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR---MTLTMAVELP 414 (689)
T ss_dssp ECSSCC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHH---HHHHCCCCCC
T ss_pred ecCCCC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH---hhcCCCCCCC
Confidence 765433 345689999999999975 579999999999999999999999997644332222111 1111111111
Q ss_pred cccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCC-----hHHHHH
Q 002238 827 KAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPD-----MGHAVN 869 (948)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt-----~~ev~~ 869 (948)
. ....++.+|+.+|++.||.+|++ ++||.+
T Consensus 415 ----~---------~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 415 ----D---------SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp ----T---------TSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred ----c---------cCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 1 12245889999999999999998 577765
No 21
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.1e-43 Score=427.33 Aligned_cols=400 Identities=20% Similarity=0.228 Sum_probs=266.6
Q ss_pred CChHHHHHHHHHHHhcCCCCC----------CCCC-CCCCCCc---cceEEeCCCCEEEEEeCCCCCcCCCCccccCCCC
Q 002238 28 GDDGDAAVMLALKKSLNPPES----------LGWS-DTDPCKW---NHVVCIEDKRITRIQIGHQNLQGTLPSNLQNLTK 93 (948)
Q Consensus 28 ~~~~d~~~l~~~k~~~~~~~~----------~~w~-~~~~C~w---~gv~c~~~~~v~~l~l~~~~l~~~~p~~l~~l~~ 93 (948)
....|++||.+|+++++.+.. .+|. +++||.| .||+|+..+||+.|+|++++++|.+|++|++|++
T Consensus 27 ~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~~L~~ 106 (636)
T 4eco_A 27 EYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTE 106 (636)
T ss_dssp HHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEECGGGGGCTT
T ss_pred hHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcccccCCCCeEEcCCCCEEEEEecCcccCCcCChHHhcCcc
Confidence 345799999999999876532 1685 5689999 9999988899999999999999999999999999
Q ss_pred CcEEEcccCCC---------------------------------------------------------------------
Q 002238 94 LERLELQWNSI--------------------------------------------------------------------- 104 (948)
Q Consensus 94 L~~L~L~~N~l--------------------------------------------------------------------- 104 (948)
|++|+|++|.+
T Consensus 107 L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l 186 (636)
T 4eco_A 107 LEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDT 186 (636)
T ss_dssp CCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCTT
T ss_pred ceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhhh
Confidence 99999998843
Q ss_pred ---------CCCCCCcCCCCCCcEEEcccccccCC-----------------CCcccc--CCCCCCEEEccCCCCCCCCC
Q 002238 105 ---------SGPLPSLNGLASLEVVMLSNNQFTSV-----------------PSDFFT--GLSSLQSIEIDNNPFSSWEI 156 (948)
Q Consensus 105 ---------~~~~p~~~~l~~L~~L~L~~N~l~~~-----------------~~~~~~--~l~~L~~L~Ls~N~l~~~~~ 156 (948)
+++++.++++++|++|+|++|.+++. +|..++ ++++|++|+|++|++.+ .+
T Consensus 187 ~l~~~~n~l~~ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~-~~ 265 (636)
T 4eco_A 187 QIGQLSNNITFVSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLT-KL 265 (636)
T ss_dssp TTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCS-SC
T ss_pred hhccccCCCccCCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCc-cC
Confidence 34333688899999999999999984 667788 99999999999999887 88
Q ss_pred CccccCCCCCCEEEccCcc-ccc-cCCCCCCCCCC------CCCcEEEcccccccccCCC--Cccc-ccccceeccCCCC
Q 002238 157 PQSLRNASGLQNFSANSAN-ITG-QIPSFFGPDEF------PGLTILHLAFNQLIGGLPA--SFSG-SQIQSLWVNGQNG 225 (948)
Q Consensus 157 p~~~~~l~~L~~L~l~~n~-l~~-~~p~~~~~~~l------~~L~~L~Ls~N~l~~~~p~--~~~~-~~l~~l~~~~~~~ 225 (948)
|..+.++++|++|++++|+ ++| .+|..++ .+ ++|++|+|++|+++ .+|. .+.. .+|+.|++.+
T Consensus 266 p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~--~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~--- 339 (636)
T 4eco_A 266 PTFLKALPEMQLINVACNRGISGEQLKDDWQ--ALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLY--- 339 (636)
T ss_dssp CTTTTTCSSCCEEECTTCTTSCHHHHHHHHH--HHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCS---
T ss_pred hHHHhcCCCCCEEECcCCCCCccccchHHHH--hhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcC---
Confidence 9999999999999999998 888 7777665 44 77888888888887 6776 5543 3455555543
Q ss_pred CCccCCCccccccCCCccEEEccCCcccccCCCCCCCCC-CcEEeccCCccccccchhhhCCC--CCcEEEcccCccccc
Q 002238 226 NAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQ-LESLSLRDNFFTGPVPDSLVKLE--SLKIVNMTNNLLQGP 302 (948)
Q Consensus 226 ~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~-L~~L~L~~N~l~~~~p~~l~~l~--~L~~L~Ls~N~l~g~ 302 (948)
|...+..+ .|.++++|++|+|++|+++..+..+..+++ |+.|+|++|.++ .+|..+..++ +|+.|+|++|++++.
T Consensus 340 N~l~g~ip-~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~ 417 (636)
T 4eco_A 340 NQLEGKLP-AFGSEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSV 417 (636)
T ss_dssp CCCEEECC-CCEEEEEESEEECCSSEEEECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTT
T ss_pred CcCccchh-hhCCCCCCCEEECCCCccccccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCc
Confidence 33333333 566777777777777777744445666776 777777777777 6676666544 677777777777776
Q ss_pred CCC-CC-------CccccccccccCCCCCCCCCCCchhhhhhHHHHHhhCCcchhccccCCCCCCCCccceee-------
Q 002238 303 VPE-FD-------RSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTC------- 367 (948)
Q Consensus 303 ~p~-~~-------~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 367 (948)
+|. +. .+.+|..++..+|....+|......+..+.. .+..++.........+.
T Consensus 418 ~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~------------L~Ls~N~l~~i~~~~~~~~~~~~~ 485 (636)
T 4eco_A 418 DGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSS------------INLMGNMLTEIPKNSLKDENENFK 485 (636)
T ss_dssp TTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSE------------EECCSSCCSBCCSSSSEETTEECT
T ss_pred chhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCE------------EECCCCCCCCcCHHHhcccccccc
Confidence 654 33 4445666666666555444322111111110 01111100000000111
Q ss_pred cCCceEEEEccCCcccccCCcccc--CccccceEeCccccccccCCcCCcCCCCCcEEEc------cCCcccCCCCC---
Q 002238 368 TKGNITVINFQKMNLTGTISPEFA--SFKSLQRLILADNNLSGMIPEGLSVLGALKELDV------SNNQLYGKIPS--- 436 (948)
Q Consensus 368 ~~~~L~~L~ls~n~l~g~ip~~~~--~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~l------s~N~l~g~ip~--- 436 (948)
.+++|+.|+|++|+++ .+|..+. .+++|+.|+|++|+|++ +|..+..+++|++|+| ++|++.+.+|.
T Consensus 486 ~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~ 563 (636)
T 4eco_A 486 NTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGIT 563 (636)
T ss_dssp TGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGG
T ss_pred ccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHh
Confidence 1125566666666665 4555554 56666666666666654 5555666666666665 34555555553
Q ss_pred -CCcccccccCCCCC
Q 002238 437 -FKSNAIVNTDGNPD 450 (948)
Q Consensus 437 -~~~~~~~~~~gnp~ 450 (948)
+.....+.+++|..
T Consensus 564 ~l~~L~~L~Ls~N~l 578 (636)
T 4eco_A 564 LCPSLTQLQIGSNDI 578 (636)
T ss_dssp GCSSCCEEECCSSCC
T ss_pred cCCCCCEEECCCCcC
Confidence 23344555555554
No 22
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2.6e-43 Score=433.99 Aligned_cols=409 Identities=26% Similarity=0.380 Sum_probs=243.1
Q ss_pred hhcCCCChHHHHHHHHHHHhcCCCCCC-CCC-CCCCCCccceEEeCCCCEEEEEeCCCCCcCC---CC------------
Q 002238 23 FVSASGDDGDAAVMLALKKSLNPPESL-GWS-DTDPCKWNHVVCIEDKRITRIQIGHQNLQGT---LP------------ 85 (948)
Q Consensus 23 ~~~~~~~~~d~~~l~~~k~~~~~~~~~-~w~-~~~~C~w~gv~c~~~~~v~~l~l~~~~l~~~---~p------------ 85 (948)
++++++.+.|++||++||+++.+|..+ +|. ++|||.|.||+|+ .++|+.|+|+++++.|. +|
T Consensus 4 ~~~~~~~~~~~~all~~k~~~~~~~~l~~W~~~~~~C~w~gv~C~-~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l 82 (768)
T 3rgz_A 4 ASPSQSLYREIHQLISFKDVLPDKNLLPDWSSNKNPCTFDGVTCR-DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESL 82 (768)
T ss_dssp ----CCHHHHHHHHHHHHTTCSCTTSSTTCCTTSCGGGSTTEEEE-TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEE
T ss_pred CccccCCHHHHHHHHHHHhhCCCcccccCCCCCCCCcCCcceEEC-CCcEEEEECCCCCcCCccCccChhHhccCccccc
Confidence 344556788999999999999877633 895 6799999999998 78999999999999887 54
Q ss_pred -----------ccccCCCCCcEEEcccCCCCCCCC---CcCCCCCCcEEEcccccccCCCCccc-cCCCCCCEEEccCCC
Q 002238 86 -----------SNLQNLTKLERLELQWNSISGPLP---SLNGLASLEVVMLSNNQFTSVPSDFF-TGLSSLQSIEIDNNP 150 (948)
Q Consensus 86 -----------~~l~~l~~L~~L~L~~N~l~~~~p---~~~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~Ls~N~ 150 (948)
..|+++++|++|+|++|.++|.+| .+.++++|++|+|++|.+++..|..+ .++++|++|+|++|+
T Consensus 83 ~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~ 162 (768)
T 3rgz_A 83 FLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANS 162 (768)
T ss_dssp ECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSC
T ss_pred CCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCc
Confidence 456666777777777777776444 46667777777777777776655544 667777777777777
Q ss_pred CCCCCCCcc---ccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccccCCCCccc-ccccceeccCCCCC
Q 002238 151 FSSWEIPQS---LRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSG-SQIQSLWVNGQNGN 226 (948)
Q Consensus 151 l~~~~~p~~---~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~l~~l~~~~~~~~ 226 (948)
+++ ..|.. +.++++|++|++++|.+++.++. . .+++|++|+|++|++++.+|. +.. .+|+.|++. .|
T Consensus 163 l~~-~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--~--~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls---~n 233 (768)
T 3rgz_A 163 ISG-ANVVGWVLSDGCGELKHLAISGNKISGDVDV--S--RCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDIS---GN 233 (768)
T ss_dssp CEE-ETHHHHHHTTCCTTCCEEECCSSEEESCCBC--T--TCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECC---SS
T ss_pred cCC-cCChhhhhhccCCCCCEEECCCCcccccCCc--c--cCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECc---CC
Confidence 665 33444 55566666666666666655443 2 566777777777777666665 432 334444443 33
Q ss_pred CccCCCccccccCCCccEEEccCCcccccCCCC-----------------------CC-CCCCcEEeccCCccccccchh
Q 002238 227 AKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDF-----------------------SG-VKQLESLSLRDNFFTGPVPDS 282 (948)
Q Consensus 227 ~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~-----------------------~~-l~~L~~L~L~~N~l~~~~p~~ 282 (948)
...+..+..+.++++|++|+|++|++++.+|.. .. +++|++|+|++|.+++.+|..
T Consensus 234 ~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~ 313 (768)
T 3rgz_A 234 KLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPF 313 (768)
T ss_dssp CCCSCHHHHTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGG
T ss_pred cCCCcccHHHhcCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchH
Confidence 344444555566666666666666655544433 22 245555555555555555555
Q ss_pred hhCCCCCcEEEcccCcccccCCC--CCCccccccccccCCCCC-CCCCCCchhhhhhHHHHHhhCCcchhccccCCCCCC
Q 002238 283 LVKLESLKIVNMTNNLLQGPVPE--FDRSVSLDMAKGSNNFCL-PSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPC 359 (948)
Q Consensus 283 l~~l~~L~~L~Ls~N~l~g~~p~--~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 359 (948)
++++++|++|+|++|+++|.+|. +..+.+|+.++..+|... .+|.. +..+. ..... .+..++...
T Consensus 314 ~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~----l~~l~------~~L~~--L~Ls~N~l~ 381 (768)
T 3rgz_A 314 FGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPES----LTNLS------ASLLT--LDLSSNNFS 381 (768)
T ss_dssp GGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTT----HHHHT------TTCSE--EECCSSEEE
T ss_pred HhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHH----HHhhh------cCCcE--EEccCCCcC
Confidence 55555555555555555554442 444445555554444332 12211 00000 00000 001111000
Q ss_pred CCccceeec--CCceEEEEccCCcccccCCccccCccccceEeCccccccccCCcCCcCCCCCcEEEccCCcccCCCCC-
Q 002238 360 SDWIGVTCT--KGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPS- 436 (948)
Q Consensus 360 ~~~~~~~~~--~~~L~~L~ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~ip~- 436 (948)
......++. +++|+.|++++|++++.+|..|+++++|++|+|++|+++|.+|..+..+++|++|++++|+++|.+|.
T Consensus 382 ~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~ 461 (768)
T 3rgz_A 382 GPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQE 461 (768)
T ss_dssp EECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGG
T ss_pred CCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHH
Confidence 000001111 45677777777777777777777777777777777777777777777777777777777777776664
Q ss_pred ---CCcccccccCCCCCCCC
Q 002238 437 ---FKSNAIVNTDGNPDIGK 453 (948)
Q Consensus 437 ---~~~~~~~~~~gnp~~~~ 453 (948)
+.....+.+++|...+.
T Consensus 462 ~~~l~~L~~L~L~~N~l~~~ 481 (768)
T 3rgz_A 462 LMYVKTLETLILDFNDLTGE 481 (768)
T ss_dssp GGGCTTCCEEECCSSCCCSC
T ss_pred HcCCCCceEEEecCCcccCc
Confidence 33455666666655433
No 23
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.7e-43 Score=430.17 Aligned_cols=404 Identities=18% Similarity=0.237 Sum_probs=304.5
Q ss_pred CCCChHHHHHHHHHHHhcCCCCCCCCC--C----CCC--CCc------------cceEEeCCCCEEEEEeCCCCCcCCCC
Q 002238 26 ASGDDGDAAVMLALKKSLNPPESLGWS--D----TDP--CKW------------NHVVCIEDKRITRIQIGHQNLQGTLP 85 (948)
Q Consensus 26 ~~~~~~d~~~l~~~k~~~~~~~~~~w~--~----~~~--C~w------------~gv~c~~~~~v~~l~l~~~~l~~~~p 85 (948)
+++...|++||++||+++.+| +|+ + .+| |.| .||.|+..+||+.|+|++++++|.+|
T Consensus 264 ~~~~~~d~~ALl~~k~~l~~~---~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~ip 340 (876)
T 4ecn_A 264 TAEYIKDYKALKAIWEALDGK---NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVP 340 (876)
T ss_dssp CCHHHHHHHHHHHHHHHTTGG---GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEEEC
T ss_pred cccchHHHHHHHHHHHHcCCC---CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCcCc
Confidence 344568999999999999876 553 2 356 999 99999888999999999999999999
Q ss_pred ccccCCCCCcEEEc-ccCCCCCC---------------------------------------------------------
Q 002238 86 SNLQNLTKLERLEL-QWNSISGP--------------------------------------------------------- 107 (948)
Q Consensus 86 ~~l~~l~~L~~L~L-~~N~l~~~--------------------------------------------------------- 107 (948)
+.|++|++|+.|+| ++|.++|.
T Consensus 341 ~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~ 420 (876)
T 4ecn_A 341 DAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKD 420 (876)
T ss_dssp GGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCC
T ss_pred hHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccccc
Confidence 99999999999999 77754332
Q ss_pred -------------------CC-CcCCCCCCcEEEcccccccC-----------------CCCcccc--CCCCCCEEEccC
Q 002238 108 -------------------LP-SLNGLASLEVVMLSNNQFTS-----------------VPSDFFT--GLSSLQSIEIDN 148 (948)
Q Consensus 108 -------------------~p-~~~~l~~L~~L~L~~N~l~~-----------------~~~~~~~--~l~~L~~L~Ls~ 148 (948)
+| .|.++++|++|+|++|+|++ .+|..++ ++++|+.|+|++
T Consensus 421 ~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~ 500 (876)
T 4ecn_A 421 SRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYN 500 (876)
T ss_dssp CCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEES
T ss_pred cccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcC
Confidence 45 68889999999999999999 2566666 999999999999
Q ss_pred CCCCCCCCCccccCCCCCCEEEccCcc-ccc-cCCCCCC-----CCCCCCCcEEEcccccccccCCC--Cccc-ccccce
Q 002238 149 NPFSSWEIPQSLRNASGLQNFSANSAN-ITG-QIPSFFG-----PDEFPGLTILHLAFNQLIGGLPA--SFSG-SQIQSL 218 (948)
Q Consensus 149 N~l~~~~~p~~~~~l~~L~~L~l~~n~-l~~-~~p~~~~-----~~~l~~L~~L~Ls~N~l~~~~p~--~~~~-~~l~~l 218 (948)
|++.+ .+|..+.++++|+.|+|++|+ +++ .+|..++ ...+++|++|+|++|+++ .+|. .+.. .+|+.|
T Consensus 501 N~l~~-~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L 578 (876)
T 4ecn_A 501 CPNMT-QLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLL 578 (876)
T ss_dssp CTTCC-SCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEE
T ss_pred CCCCc-cChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEE
Confidence 99988 899999999999999999998 888 7776543 114569999999999999 8887 6654 456666
Q ss_pred eccCCCCCCccCCCccccccCCCccEEEccCCcccccCCCCCCCCC-CcEEeccCCccccccchhhhCCCC--CcEEEcc
Q 002238 219 WVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQ-LESLSLRDNFFTGPVPDSLVKLES--LKIVNMT 295 (948)
Q Consensus 219 ~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~-L~~L~L~~N~l~~~~p~~l~~l~~--L~~L~Ls 295 (948)
++.++... ..+ .|.++++|+.|+|++|+++..+..+..+++ |+.|+|++|+|+ .+|..+..++. |+.|+|+
T Consensus 579 ~Ls~N~l~----~lp-~~~~L~~L~~L~Ls~N~l~~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls 652 (876)
T 4ecn_A 579 DCVHNKVR----HLE-AFGTNVKLTDLKLDYNQIEEIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFS 652 (876)
T ss_dssp ECTTSCCC----BCC-CCCTTSEESEEECCSSCCSCCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECC
T ss_pred ECCCCCcc----cch-hhcCCCcceEEECcCCccccchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECc
Confidence 66654433 334 788999999999999999944446888888 999999999999 88988887754 9999999
Q ss_pred cCcccccCCCCC------CccccccccccCCCCCCCCCCCchhhhhhHHHHHhhCCcchhccccCCC----CCCCCccce
Q 002238 296 NNLLQGPVPEFD------RSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGN----DPCSDWIGV 365 (948)
Q Consensus 296 ~N~l~g~~p~~~------~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 365 (948)
+|+++|.+|.+. ...+|..+++.+|....+|......+..+. . .+..++ .|.....+.
T Consensus 653 ~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~----------~--L~Ls~N~L~~ip~~~~~~~ 720 (876)
T 4ecn_A 653 YNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPIS----------T--IILSNNLMTSIPENSLKPK 720 (876)
T ss_dssp SSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCS----------E--EECCSCCCSCCCTTSSSCT
T ss_pred CCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCC----------E--EECCCCcCCccChHHhccc
Confidence 999999887654 334677778787776655432211111111 0 111111 111000000
Q ss_pred ---eecCCceEEEEccCCcccccCCcccc--CccccceEeCccccccccCCcCCcCCCCCcEEEccC------CcccCCC
Q 002238 366 ---TCTKGNITVINFQKMNLTGTISPEFA--SFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSN------NQLYGKI 434 (948)
Q Consensus 366 ---~~~~~~L~~L~ls~n~l~g~ip~~~~--~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~ls~------N~l~g~i 434 (948)
..++++|+.|+|++|+++ .+|..+. ++++|+.|+|++|+|++ +|..+..+++|+.|+|++ |++.+.+
T Consensus 721 ~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~i 798 (876)
T 4ecn_A 721 DGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQW 798 (876)
T ss_dssp TSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCC
T ss_pred cccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccC
Confidence 112337888888888887 6777776 78888888888888876 777788888888888865 6777777
Q ss_pred CC----CCcccccccCCCCCCCCcc
Q 002238 435 PS----FKSNAIVNTDGNPDIGKEK 455 (948)
Q Consensus 435 p~----~~~~~~~~~~gnp~~~~~~ 455 (948)
|. +.....+.+++|.. ...|
T Consensus 799 p~~l~~L~~L~~L~Ls~N~L-~~Ip 822 (876)
T 4ecn_A 799 PTGITTCPSLIQLQIGSNDI-RKVD 822 (876)
T ss_dssp CTTGGGCSSCCEEECCSSCC-CBCC
T ss_pred hHHHhcCCCCCEEECCCCCC-CccC
Confidence 74 34556677777776 4444
No 24
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=6.5e-43 Score=386.42 Aligned_cols=290 Identities=37% Similarity=0.689 Sum_probs=236.4
Q ss_pred ceeeHHHHHHhhcCCcccceecccCceEEEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEE
Q 002238 581 MVISIQVLRNVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC 660 (948)
Q Consensus 581 ~~~~~~~l~~~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~ 660 (948)
..+++.++....++|+..+.||+|+||.||+|+.++|+.||||++.... .......+.+|+++++.++||||+++++++
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 96 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEER-TQGGELQFQTEVEMISMAVHRNLLRLRGFC 96 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC------CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEecccc-CchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence 4577889999999999999999999999999998889999999987643 222234689999999999999999999999
Q ss_pred EeCCceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEE
Q 002238 661 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKV 740 (948)
Q Consensus 661 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl 740 (948)
.+.+..++||||+++|+|.+++.... .....++|..++.++.|++.||+|||+.+..+|+||||||+|||++.++.+||
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl 175 (326)
T 3uim_A 97 MTPTERLLVYPYMANGSVASCLRERP-ESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV 175 (326)
T ss_dssp CCSSCCEEEEECCTTCBHHHHHHCCS-TTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEE
T ss_pred ecCCceEEEEEeccCCCHHHHHHhcc-ccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEe
Confidence 99999999999999999999986532 22356999999999999999999999833339999999999999999999999
Q ss_pred eecCCceecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--chhhhhHHHHHHHh
Q 002238 741 ADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQ--PEESMHLVTWFRRI 818 (948)
Q Consensus 741 ~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~--~~~~~~~~~~~~~~ 818 (948)
+|||+++..............||+.|+|||++.+..++.++||||||+++|||++|+.||.... .........|....
T Consensus 176 ~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 255 (326)
T 3uim_A 176 GDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 255 (326)
T ss_dssp CCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTT
T ss_pred ccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHH
Confidence 9999999776555555566679999999999999999999999999999999999999996321 11222334444333
Q ss_pred hcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhh
Q 002238 819 HLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSL 874 (948)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~ 874 (948)
.. ........+..+. ..........+.+++.+|++.||.+||++.+|+++|+..
T Consensus 256 ~~-~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 256 LK-EKKLEALVDVDLQ-GNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp TS-SCCSTTSSCTTCT-TSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred hh-chhhhhhcChhhc-cccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 22 2334444444443 334456677899999999999999999999999999874
No 25
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=4.6e-42 Score=375.77 Aligned_cols=267 Identities=31% Similarity=0.509 Sum_probs=208.4
Q ss_pred hhcCCcccceecccCceEEEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEEE
Q 002238 591 VTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 670 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 670 (948)
..++|++.+.||+|+||.||+|+.. |+.||||++..........+++.+|++++++++||||+++++++.+.+..++||
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT 113 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEE
T ss_pred ChhHceeeeEeecCCCeEEEEEEEC-CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEE
Confidence 3568999999999999999999875 899999999876556666788999999999999999999999999999999999
Q ss_pred EecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCC--eeecCCCCccEEEcCCCCeEEeecCCcee
Q 002238 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQS--FIHRDLKPSNILLGDDMRAKVADFGLVRL 748 (948)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivHrDik~~Nill~~~~~~kl~DfGla~~ 748 (948)
||+++|+|.+++..... ...+++..++.++.|++.||+|||+ .+ |+||||||+||+++.++.+||+|||+++.
T Consensus 114 e~~~~~~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 188 (309)
T 3p86_A 114 EYLSRGSLYRLLHKSGA--REQLDERRRLSMAYDVAKGMNYLHN---RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL 188 (309)
T ss_dssp ECCTTCBHHHHHHSTTH--HHHSCHHHHHHHHHHHHHHHHHHHT---SSSCCCCTTCCGGGEEECTTCCEEECCCC----
T ss_pred ecCCCCcHHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHc---CCCCEECCCCChhhEEEeCCCcEEECCCCCCcc
Confidence 99999999999854211 1248999999999999999999997 67 99999999999999999999999999985
Q ss_pred cCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCccccccc
Q 002238 749 APEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHKA 828 (948)
Q Consensus 749 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 828 (948)
..... .......||+.|+|||++.+..++.++||||||+++|||++|+.||......+....+. . .....
T Consensus 189 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~---~-~~~~~----- 258 (309)
T 3p86_A 189 KASTF-LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVG---F-KCKRL----- 258 (309)
T ss_dssp --------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHH---H-SCCCC-----
T ss_pred ccccc-cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---h-cCCCC-----
Confidence 44332 12334579999999999999999999999999999999999999998766543221111 0 00000
Q ss_pred cCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhhhCCC
Q 002238 829 IDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELWKPT 881 (948)
Q Consensus 829 ~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~~~~~ 881 (948)
.+ ......++.+++.+|++.+|.+||+++++++.|+.+.+...+.
T Consensus 259 ---~~-----~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p~ 303 (309)
T 3p86_A 259 ---EI-----PRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPP 303 (309)
T ss_dssp ---CC-----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-----
T ss_pred ---CC-----CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCCC
Confidence 00 0112345889999999999999999999999999998765543
No 26
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.7e-41 Score=372.10 Aligned_cols=260 Identities=27% Similarity=0.439 Sum_probs=213.7
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 670 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 670 (948)
.++|+..+.||+|+||.||+|.+. +++.||+|++... .....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 86 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF--DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFIT 86 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEE
Confidence 467889999999999999999875 6899999988643 5566788999999999999999999999999999999999
Q ss_pred EecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceecC
Q 002238 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 750 (948)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~~ 750 (948)
||+++|+|.+++.. ....+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 87 e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 159 (310)
T 3s95_A 87 EYIKGGTLRGIIKS----MDSQYPWSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMV 159 (310)
T ss_dssp ECCTTCBHHHHHHH----CCTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEECTTSCEEECCCTTCEECC
T ss_pred EecCCCcHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCcCeEEECCCCCEEEeecccceecc
Confidence 99999999999853 23579999999999999999999997 899999999999999999999999999998654
Q ss_pred CCCCce-------------eeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhh---hHHHH
Q 002238 751 EGKGSI-------------ETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESM---HLVTW 814 (948)
Q Consensus 751 ~~~~~~-------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~---~~~~~ 814 (948)
...... .....||+.|+|||++.+..++.++||||||+++|||++|..|+....+.... .....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~ 239 (310)
T 3s95_A 160 DEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGF 239 (310)
T ss_dssp --------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHH
T ss_pred cccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcc
Confidence 433211 11457999999999999999999999999999999999999998765432211 01110
Q ss_pred HHHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhhhC
Q 002238 815 FRRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELWK 879 (948)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~~~ 879 (948)
.. ....+. .+..+.+++.+|++.||++||++.++++.|+.+.....
T Consensus 240 ~~----------~~~~~~---------~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~ 285 (310)
T 3s95_A 240 LD----------RYCPPN---------CPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLA 285 (310)
T ss_dssp HH----------HTCCTT---------CCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred cc----------ccCCCC---------CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcc
Confidence 00 001111 12348899999999999999999999999999976543
No 27
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=1.2e-40 Score=364.80 Aligned_cols=285 Identities=37% Similarity=0.634 Sum_probs=231.0
Q ss_pred cceeeHHHHHHhhcCCccc------ceecccCceEEEEEEEcCCcEEEEEEeecCc--CChhhHHHHHHHHHHHHhcCCC
Q 002238 580 NMVISIQVLRNVTNNFSEE------NILGRGGFGTVYKGELHDGTKIAVKRMEAGV--ISGKGLTEFKSEIAVLTKVRHR 651 (948)
Q Consensus 580 ~~~~~~~~l~~~~~~~~~~------~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~H~ 651 (948)
...+++.++..++++|... +.||+|+||.||+|.. +++.||||++.... ......+.+.+|+.++++++||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 4567899999999999887 8999999999999987 48999999987542 1234467899999999999999
Q ss_pred ceeeEEeEEEeCCceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEE
Q 002238 652 HLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNIL 731 (948)
Q Consensus 652 niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nil 731 (948)
||+++++++.+.+..++||||+++|+|.+++... .....+++..++.++.|++.||+|||+ .+|+||||||+||+
T Consensus 91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nil 165 (307)
T 2nru_A 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL--DGTPPLSWHMRCKIAQGAANGINFLHE---NHHIHRDIKSANIL 165 (307)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTG--GGCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEE
T ss_pred CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhc--cCCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecCCCCHHHEE
Confidence 9999999999999999999999999999998642 223579999999999999999999997 89999999999999
Q ss_pred EcCCCCeEEeecCCceecCCCCCc-eeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhh
Q 002238 732 LGDDMRAKVADFGLVRLAPEGKGS-IETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMH 810 (948)
Q Consensus 732 l~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~ 810 (948)
++.++.+||+|||+++........ ......||+.|+|||++.+ .++.++||||||+++|||++|+.||..........
T Consensus 166 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~ 244 (307)
T 2nru_A 166 LDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 244 (307)
T ss_dssp ECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTT
T ss_pred EcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHH
Confidence 999999999999999866543322 2334579999999998764 58999999999999999999999998755433221
Q ss_pred HHHHHHHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhh
Q 002238 811 LVTWFRRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLV 875 (948)
Q Consensus 811 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~ 875 (948)
.+..........+...+++.+. .........+.+++.+|++.+|.+||++.++++.|+++.
T Consensus 245 --~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 245 --DIKEEIEDEEKTIEDYIDKKMN--DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp --HHHHHHHTTSCCHHHHSCSSCS--CCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred --HHHHHhhhhhhhhhhhcccccc--ccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 1222222222333344444332 233455677999999999999999999999999999875
No 28
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=2.7e-41 Score=373.91 Aligned_cols=275 Identities=16% Similarity=0.199 Sum_probs=222.4
Q ss_pred hcCCcccceecccCceEEEEEEE-cCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCceEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKLLV 669 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv 669 (948)
.++|++.+.||+|+||.||+|+. .+|+.||||++.... ..+.+.+|+++++++ +||||+++++++.+++..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv 83 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS----RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMV 83 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC----SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc----chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEE
Confidence 46899999999999999999986 478999999987542 224688999999999 999999999999999999999
Q ss_pred EEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCC-----eEEeecC
Q 002238 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR-----AKVADFG 744 (948)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~-----~kl~DfG 744 (948)
|||+ +++|.+++... ...+++.+++.++.|++.||+|||+ .+|+||||||+|||++.++. +||+|||
T Consensus 84 ~e~~-~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~---~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg 155 (330)
T 2izr_A 84 LELL-GPSLEDLFDLC----DRTFSLKTVLMIAIQLISRMEYVHS---KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFA 155 (330)
T ss_dssp EECC-CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTCTTSEEECCCT
T ss_pred EEeC-CCCHHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeeccCCCCCCceEEEEEcc
Confidence 9999 99999998542 3579999999999999999999997 79999999999999998887 9999999
Q ss_pred CceecCCCCCc------eeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHh
Q 002238 745 LVRLAPEGKGS------IETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRI 818 (948)
Q Consensus 745 la~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 818 (948)
+++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+.......+...
T Consensus 156 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~ 235 (330)
T 2izr_A 156 LAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDT 235 (330)
T ss_dssp TCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHH
T ss_pred cceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhh
Confidence 99966543321 124567999999999999999999999999999999999999999886544433322222111
Q ss_pred hcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhhhCCCCCCCccccc
Q 002238 819 HLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELWKPTDQNSEDIYG 890 (948)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~~~~~~~~~~~~~~ 890 (948)
.... .........+ ++.+++.+|++.+|.+||++.+|.+.|+++.+..........+|..
T Consensus 236 ~~~~-----------~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~~~~~~~dw~~ 295 (330)
T 2izr_A 236 KRAT-----------PIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDWIG 295 (330)
T ss_dssp HHHS-----------CHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCCSCCCTTTT
T ss_pred hccC-----------CHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCccCCC
Confidence 1000 0000011122 6899999999999999999999999999998877766666666654
No 29
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=3.3e-41 Score=367.06 Aligned_cols=250 Identities=23% Similarity=0.412 Sum_probs=208.5
Q ss_pred hcCCcccceecccCceEEEEEEE-cCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 670 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 670 (948)
.++|+..+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+.+++.++||||+++++++.+++..++||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 96 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ--QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGG--CSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccc--ccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEE
Confidence 46899999999999999999986 478999999987642 334567899999999999999999999999999999999
Q ss_pred EecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceecC
Q 002238 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 750 (948)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~~ 750 (948)
||+++|+|.+++.. ..+++.++..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 97 e~~~~~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 167 (297)
T 3fxz_A 97 EYLAGGSLTDVVTE------TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 167 (297)
T ss_dssp ECCTTCBHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred ECCCCCCHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEECCCCCEEEeeCCCceecC
Confidence 99999999998853 358999999999999999999997 899999999999999999999999999998665
Q ss_pred CCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCccccccccC
Q 002238 751 EGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHKAID 830 (948)
Q Consensus 751 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 830 (948)
.... ......||+.|+|||++.+..++.++||||||+++|||++|+.||....+......+. ... .
T Consensus 168 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~---~~~----------~ 233 (297)
T 3fxz_A 168 PEQS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA---TNG----------T 233 (297)
T ss_dssp STTC-CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH---HHC----------S
T ss_pred Cccc-ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---hCC----------C
Confidence 4332 2345679999999999999999999999999999999999999998765443222111 000 0
Q ss_pred cccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 831 PTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 831 ~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
+.+. ........+.+++.+|++.||++||+++|+++
T Consensus 234 ~~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 234 PELQ---NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp CCCS---CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCCC---CccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 0111 01122345889999999999999999999976
No 30
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=8.4e-42 Score=376.47 Aligned_cols=267 Identities=25% Similarity=0.392 Sum_probs=210.9
Q ss_pred hcCCcccceecccCceEEEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCc----eE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNE----KL 667 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~----~~ 667 (948)
.++|++.+.||+|+||.||+|++. ++.||||++... ......+.+|+.++++++||||+++++++.+... .+
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 98 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQ---DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLW 98 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecC---chHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEE
Confidence 467999999999999999999876 899999998653 3344566779999999999999999999987543 69
Q ss_pred EEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCC----------CeeecCCCCccEEEcCCCC
Q 002238 668 LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ----------SFIHRDLKPSNILLGDDMR 737 (948)
Q Consensus 668 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~----------~ivHrDik~~Nill~~~~~ 737 (948)
+||||+++|+|.+++.. ..+++..++.++.|++.||+|||+ . +|+||||||+|||++.++.
T Consensus 99 lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~qi~~al~~LH~---~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~ 169 (322)
T 3soc_A 99 LITAFHEKGSLSDFLKA------NVVSWNELCHIAETMARGLAYLHE---DIPGLKDGHKPAISHRDIKSKNVLLKNNLT 169 (322)
T ss_dssp EEEECCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHTC---CEEEETTEEECEEECSCCSGGGEEECTTCC
T ss_pred EEEecCCCCCHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHh---hccccccccCCCEEeCCCChHhEEECCCCe
Confidence 99999999999999854 458999999999999999999997 5 9999999999999999999
Q ss_pred eEEeecCCceecCCCCCc-eeeeecccccccCceecccC-----CCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhH
Q 002238 738 AKVADFGLVRLAPEGKGS-IETRIAGTFGYLAPEYAVTG-----RVTTKVDVFSFGVILMELITGRKALDESQPEESMHL 811 (948)
Q Consensus 738 ~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~-----~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~ 811 (948)
+||+|||+++........ ......||+.|+|||++.+. .++.++|||||||++|||++|+.||...........
T Consensus 170 ~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~ 249 (322)
T 3soc_A 170 ACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPF 249 (322)
T ss_dssp EEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTT
T ss_pred EEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccch
Confidence 999999999865543322 23335799999999999863 566789999999999999999999976543221111
Q ss_pred ----------HHHHHHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhh
Q 002238 812 ----------VTWFRRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVEL 877 (948)
Q Consensus 812 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~ 877 (948)
..+.... ......+.+...........++.+++.+||+.||++|||+.+|++.|+++.+.
T Consensus 250 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 250 EEEIGQHPSLEDMQEVV------VHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp HHHHCSSCCHHHHHHHH------TTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hhhhccCCchhhhhhhh------hcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 1111111 01111222221222234556799999999999999999999999999998754
No 31
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=4e-41 Score=377.85 Aligned_cols=265 Identities=26% Similarity=0.419 Sum_probs=215.7
Q ss_pred hcCCcccceecccCceEEEEEEEc--------CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEe
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH--------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLD 662 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~--------~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~ 662 (948)
.++|++.+.||+|+||.||+|++. ++..||||+++.. ......+.+.+|+++++++ +||||+++++++.+
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 158 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 158 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTT-CBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCC-cCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc
Confidence 467899999999999999999862 3567999999764 2445567899999999999 89999999999999
Q ss_pred CCceEEEEEecCCCChhHHHHhhhh-----------cCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEE
Q 002238 663 GNEKLLVFEYMPQGTLSRHIFNWAE-----------EGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNIL 731 (948)
Q Consensus 663 ~~~~~lv~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nil 731 (948)
.+..++||||+++|+|.+++..... .....+++.+++.++.||++||+|||+ .+|+||||||+|||
T Consensus 159 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIl 235 (370)
T 2psq_A 159 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVL 235 (370)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEE
T ss_pred CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchhhEE
Confidence 9999999999999999999965321 112458999999999999999999997 89999999999999
Q ss_pred EcCCCCeEEeecCCceecCCCCC-ceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchhhh
Q 002238 732 LGDDMRAKVADFGLVRLAPEGKG-SIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDESQPEESM 809 (948)
Q Consensus 732 l~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~ 809 (948)
++.++.+||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||++ |+.||.+....+..
T Consensus 236 l~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~ 315 (370)
T 2psq_A 236 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 315 (370)
T ss_dssp ECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH
T ss_pred ECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 99999999999999986544322 12233457889999999999999999999999999999999 99999876544332
Q ss_pred hHHHHHHHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhhh
Q 002238 810 HLVTWFRRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELW 878 (948)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~~ 878 (948)
..+ .. .. .+.. ......++.+++.+||+.+|++||++.|+++.|+.+....
T Consensus 316 ~~~---~~-----~~-----~~~~-----~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~ 366 (370)
T 2psq_A 316 KLL---KE-----GH-----RMDK-----PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 366 (370)
T ss_dssp HHH---HT-----TC-----CCCC-----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHH---hc-----CC-----CCCC-----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence 211 11 00 0001 1122346889999999999999999999999999987644
No 32
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.6e-41 Score=373.95 Aligned_cols=251 Identities=23% Similarity=0.352 Sum_probs=211.0
Q ss_pred hhcCCcccceecccCceEEEEEEE-cCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEE
Q 002238 591 VTNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 669 (948)
..++|++.+.||+|+||.||+|.+ .+|+.||||++..........+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 92 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI 92 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence 356899999999999999999987 5799999999987665666678899999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceec
Q 002238 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (948)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~ 749 (948)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 93 ~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 164 (328)
T 3fe3_A 93 MEYASGGEVFDYLVAH-----GRMKEKEARSKFRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEF 164 (328)
T ss_dssp ECCCTTCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTTCCGGG
T ss_pred EECCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCCHHHEEEcCCCCEEEeeccCceec
Confidence 9999999999988541 468999999999999999999997 89999999999999999999999999999865
Q ss_pred CCCCCceeeeecccccccCceecccCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCccccccc
Q 002238 750 PEGKGSIETRIAGTFGYLAPEYAVTGRVT-TKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHKA 828 (948)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 828 (948)
.... ......||+.|+|||++.+..+. .++||||+||++|||++|+.||.+....+....+ ........
T Consensus 165 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i------~~~~~~~p-- 234 (328)
T 3fe3_A 165 TVGG--KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV------LRGKYRIP-- 234 (328)
T ss_dssp SSSC--GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH------HHCCCCCC--
T ss_pred CCCC--ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHH------HhCCCCCC--
Confidence 4432 23456799999999999888775 8999999999999999999999876544322211 11111110
Q ss_pred cCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 829 IDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 829 ~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
......+.+++.+|++.||.+|||++|+++.
T Consensus 235 -----------~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 235 -----------FYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp -----------TTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred -----------CCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0122458899999999999999999999873
No 33
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2e-41 Score=375.20 Aligned_cols=254 Identities=26% Similarity=0.403 Sum_probs=201.0
Q ss_pred HhhcCCcccceecccCceEEEEEEE-cCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEE
Q 002238 590 NVTNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLL 668 (948)
Q Consensus 590 ~~~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 668 (948)
.+.++|++.+.||+|+||.||+|+. .+|+.||||++..... ......+.+|++++++++||||+++++++.+.+..++
T Consensus 7 ~l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~-~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l 85 (347)
T 3zgw_A 7 ELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTL-GSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFM 85 (347)
T ss_dssp TTTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC----CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HHhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEcccc-chHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEE
Confidence 3568899999999999999999986 4799999999976532 2335678999999999999999999999999999999
Q ss_pred EEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCcee
Q 002238 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 748 (948)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~ 748 (948)
||||+++|+|.+++.. ...+++.++..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||++..
T Consensus 86 v~E~~~gg~L~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~kL~DFG~a~~ 157 (347)
T 3zgw_A 86 VLEYCPGGELFDYIIS-----QDRLSEEETRVVFRQIVSAVAYVHS---QGYAHRDLKPENLLFDEYHKLKLIDFGLCAK 157 (347)
T ss_dssp EEECCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEeCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCccHHHEEEcCCCCEEEEeccCccc
Confidence 9999999999998854 1468999999999999999999997 8999999999999999999999999999986
Q ss_pred cCCCCCceeeeecccccccCceecccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCcccccc
Q 002238 749 APEGKGSIETRIAGTFGYLAPEYAVTGRV-TTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHK 827 (948)
Q Consensus 749 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 827 (948)
.............||+.|+|||++.+..+ +.++||||+||++|||++|+.||.+....+.... +......+..
T Consensus 158 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~------i~~~~~~~p~ 231 (347)
T 3zgw_A 158 PKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKK------IMRGKYDVPK 231 (347)
T ss_dssp --------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH------HHHTCCCCCT
T ss_pred ccCCCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH------HHcCCCCCCC
Confidence 65544434455679999999999988775 8999999999999999999999987654332211 1111111111
Q ss_pred ccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 002238 828 AIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVL 871 (948)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L 871 (948)
.....+.+++.+|++.||++|||++|+++.-
T Consensus 232 -------------~~s~~~~~li~~~L~~dP~~Rps~~eil~hp 262 (347)
T 3zgw_A 232 -------------WLSPSSILLLQQMLQVDPKKRISMKNLLNHP 262 (347)
T ss_dssp -------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHTCH
T ss_pred -------------CCCHHHHHHHHHHcccCHhHCcCHHHHhcCc
Confidence 1123578999999999999999999998853
No 34
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3e-41 Score=362.17 Aligned_cols=257 Identities=29% Similarity=0.490 Sum_probs=213.5
Q ss_pred hcCCcccceecccCceEEEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFE 671 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 671 (948)
.++|+..+.||+|+||.||+|.+.+++.||||++.... ...+++.+|++++++++||||+++++++.+++..++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA---MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFE 85 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS---BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccc---cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEE
Confidence 35788999999999999999999889999999997643 234679999999999999999999999999999999999
Q ss_pred ecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceecCC
Q 002238 672 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE 751 (948)
Q Consensus 672 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~~~ 751 (948)
|+++++|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 86 ~~~~~~L~~~l~~----~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 158 (269)
T 4hcu_A 86 FMEHGCLSDYLRT----QRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 158 (269)
T ss_dssp CCTTCBHHHHHHT----TTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred eCCCCcHHHHHHh----cCcccCHHHHHHHHHHHHHHHHHHHh---CCeecCCcchheEEEcCCCCEEeccccccccccc
Confidence 9999999999843 33568999999999999999999997 8999999999999999999999999999986544
Q ss_pred CCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHhhcCccccccccC
Q 002238 752 GKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDESQPEESMHLVTWFRRIHLSKDSFHKAID 830 (948)
Q Consensus 752 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 830 (948)
..........||+.|+|||++.+..++.++||||+|+++|||++ |+.||......+....+ ... . ....
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~------~~~---~-~~~~ 228 (269)
T 4hcu_A 159 DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI------STG---F-RLYK 228 (269)
T ss_dssp HHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH------HTT---C-CCCC
T ss_pred cccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHH------hcC---c-cCCC
Confidence 33222334457889999999999999999999999999999999 99999876544322111 110 0 0011
Q ss_pred cccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhh
Q 002238 831 PTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVE 876 (948)
Q Consensus 831 ~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~ 876 (948)
+ ......+.+++.+|++.+|++||++.++++.|+++.+
T Consensus 229 ~--------~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 229 P--------RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp C--------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred C--------CcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 1 1112458899999999999999999999999999875
No 35
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=3.9e-41 Score=361.05 Aligned_cols=258 Identities=27% Similarity=0.414 Sum_probs=214.7
Q ss_pred hcCCcccceecccCceEEEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFE 671 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 671 (948)
.++|++.+.||+|+||.||+|+++++..||||++.... ...+++.+|++++++++||||+++++++.++...++|||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS---MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTE 83 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT---BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC---CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEE
Confidence 46789999999999999999999888899999997642 234678999999999999999999999999999999999
Q ss_pred ecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceecCC
Q 002238 672 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE 751 (948)
Q Consensus 672 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~~~ 751 (948)
|+++++|.+++... ...+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.++|+|||+++....
T Consensus 84 ~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~ 156 (268)
T 3sxs_A 84 YISNGCLLNYLRSH----GKGLEPSQLLEMCYDVCEGMAFLES---HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD 156 (268)
T ss_dssp CCTTCBHHHHHHHH----GGGCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCSGGGEEECTTCCEEECCTTCEEECCT
T ss_pred ccCCCcHHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCcceEEECCCCCEEEccCccceecch
Confidence 99999999998542 2468999999999999999999997 8999999999999999999999999999987665
Q ss_pred CCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHhhcCccccccccC
Q 002238 752 GKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDESQPEESMHLVTWFRRIHLSKDSFHKAID 830 (948)
Q Consensus 752 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 830 (948)
..........+|+.|+|||++.+..++.++||||||+++|||++ |+.||......+....+ .... ....
T Consensus 157 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~------~~~~----~~~~ 226 (268)
T 3sxs_A 157 DQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKV------SQGH----RLYR 226 (268)
T ss_dssp TCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH------HTTC----CCCC
T ss_pred hhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHH------HcCC----CCCC
Confidence 54333344557788999999999899999999999999999999 99999876544322111 1100 0011
Q ss_pred cccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhh
Q 002238 831 PTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVEL 877 (948)
Q Consensus 831 ~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~ 877 (948)
+. .....+.+++.+|++.+|++||++.++++.|+.+.++
T Consensus 227 ~~--------~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 227 PH--------LASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp CT--------TSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred CC--------cChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 11 1123588999999999999999999999999988643
No 36
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=3.1e-41 Score=369.72 Aligned_cols=292 Identities=26% Similarity=0.484 Sum_probs=220.7
Q ss_pred CCChHHHHHHHHHHHhcCCCCCC-CCC-CCCCCC--ccceEEeCC---CCEEEEEeCCCCCcC--CCCccccCCCCCcEE
Q 002238 27 SGDDGDAAVMLALKKSLNPPESL-GWS-DTDPCK--WNHVVCIED---KRITRIQIGHQNLQG--TLPSNLQNLTKLERL 97 (948)
Q Consensus 27 ~~~~~d~~~l~~~k~~~~~~~~~-~w~-~~~~C~--w~gv~c~~~---~~v~~l~l~~~~l~~--~~p~~l~~l~~L~~L 97 (948)
.|.+.|++||++||+++.++..+ +|. +++||. |.||.|+.. ++|+.|+|++|+++| .+|+.|.++++|++|
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~~l~~W~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L 81 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFL 81 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSEE
T ss_pred CCCHHHHHHHHHHHHhcCCcccccCCCCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCCee
Confidence 58999999999999999876543 785 468998 999999764 799999999999999 899999999999999
Q ss_pred Eccc-CCCCCCCC-CcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEccCCCCCCCCCCccccCCCCCCEEEccCcc
Q 002238 98 ELQW-NSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSAN 175 (948)
Q Consensus 98 ~L~~-N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~ 175 (948)
+|++ |.+.+.+| .|.++++|++|+|++|.+++..|..|.++++|++|+|++|++++ .+|..+..+++|++|++++|+
T Consensus 82 ~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~ 160 (313)
T 1ogq_A 82 YIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSG-TLPPSISSLPNLVGITFDGNR 160 (313)
T ss_dssp EEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEES-CCCGGGGGCTTCCEEECCSSC
T ss_pred eCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCC-cCChHHhcCCCCCeEECcCCc
Confidence 9994 88888777 68888888888888888888888888888888888888888876 567777777777777777777
Q ss_pred ccccCCCCCCCCCCC-CCcEEEcccccccccCCCCcccccccceeccCCCCCCccCCCccccccCCCccEEEccCCcccc
Q 002238 176 ITGQIPSFFGPDEFP-GLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSG 254 (948)
Q Consensus 176 l~~~~p~~~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~ 254 (948)
+++.+|..++ .++ +|++|+|++|++++.+|..+
T Consensus 161 l~~~~p~~l~--~l~~~L~~L~L~~N~l~~~~~~~~-------------------------------------------- 194 (313)
T 1ogq_A 161 ISGAIPDSYG--SFSKLFTSMTISRNRLTGKIPPTF-------------------------------------------- 194 (313)
T ss_dssp CEEECCGGGG--CCCTTCCEEECCSSEEEEECCGGG--------------------------------------------
T ss_pred ccCcCCHHHh--hhhhcCcEEECcCCeeeccCChHH--------------------------------------------
Confidence 7766666665 555 66666666666665555443
Q ss_pred cCCCCCCCCCCcEEeccCCccccccchhhhCCCCCcEEEcccCcccccCCCCCCccccccccccCCCCCCCCCCCchhhh
Q 002238 255 PLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLN 334 (948)
Q Consensus 255 ~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 334 (948)
..+. |+.|+|++|.+++.+|..+..+++|+.|+|++|++++.+|.+.
T Consensus 195 -----~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~--------------------------- 241 (313)
T 1ogq_A 195 -----ANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVG--------------------------- 241 (313)
T ss_dssp -----GGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGGCC---------------------------
T ss_pred -----hCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCccc---------------------------
Confidence 2233 6777777777777777777777778888887777765544311
Q ss_pred hhHHHHHhhCCcchhccccCCCCCCCCccceeecCCceEEEEccCCcccccCCccccCccccceEeCccccccccCCcCC
Q 002238 335 ALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGL 414 (948)
Q Consensus 335 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l 414 (948)
.+++|+.|+|++|++++.+|..|.++++|+.|+|++|+|+|.+|..
T Consensus 242 ---------------------------------~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~- 287 (313)
T 1ogq_A 242 ---------------------------------LSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG- 287 (313)
T ss_dssp ---------------------------------CCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-
T ss_pred ---------------------------------ccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-
Confidence 1235666666666666677777777777777777777777777765
Q ss_pred cCCCCCcEEEccCCc-ccC
Q 002238 415 SVLGALKELDVSNNQ-LYG 432 (948)
Q Consensus 415 ~~l~~L~~L~ls~N~-l~g 432 (948)
..+++|+.|++++|+ +.|
T Consensus 288 ~~l~~L~~l~l~~N~~lc~ 306 (313)
T 1ogq_A 288 GNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp TTGGGSCGGGTCSSSEEES
T ss_pred ccccccChHHhcCCCCccC
Confidence 667777777777666 444
No 37
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1e-40 Score=368.03 Aligned_cols=260 Identities=25% Similarity=0.421 Sum_probs=211.7
Q ss_pred hcCCcccceecccCceEEEEEEEc----CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH----DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKL 667 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 667 (948)
.++|++.+.||+|+||.||+|.+. .+..||||+++... .....+.+.+|++++++++||||+++++++.+++..+
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 126 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY-TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAM 126 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccE
Confidence 467899999999999999999874 34569999997642 4555678999999999999999999999999999999
Q ss_pred EEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCce
Q 002238 668 LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 747 (948)
Q Consensus 668 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~ 747 (948)
+||||+++|+|.+++.. ....+++.+++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 127 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 199 (325)
T 3kul_A 127 IVTEYMENGSLDTFLRT----HDGQFTIMQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSR 199 (325)
T ss_dssp EEEECCTTCBHHHHHHT----TTTCSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCSSCE
T ss_pred EEeeCCCCCcHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEECCCCCEEECCCCccc
Confidence 99999999999999843 23579999999999999999999997 899999999999999999999999999999
Q ss_pred ecCCCCCc--eeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHhhcCccc
Q 002238 748 LAPEGKGS--IETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDESQPEESMHLVTWFRRIHLSKDS 824 (948)
Q Consensus 748 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 824 (948)
........ ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||......+....+. . ...
T Consensus 200 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~------~-~~~ 272 (325)
T 3kul_A 200 VLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVE------E-GYR 272 (325)
T ss_dssp ECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHH------T-TCC
T ss_pred ccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHH------c-CCC
Confidence 76543322 2223446789999999999999999999999999999999 999998765543221111 0 000
Q ss_pred cccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhh
Q 002238 825 FHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVEL 877 (948)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~ 877 (948)
.. .....+..+.+++.+|++.||.+||++.+|++.|+.+.+.
T Consensus 273 ------~~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~ 314 (325)
T 3kul_A 273 ------LP-----APMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRS 314 (325)
T ss_dssp ------CC-----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred ------CC-----CCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhC
Confidence 00 0112234688999999999999999999999999998754
No 38
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.4e-40 Score=362.74 Aligned_cols=276 Identities=16% Similarity=0.220 Sum_probs=222.5
Q ss_pred hhcCCcccceecccCceEEEEEEE-cCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCceEE
Q 002238 591 VTNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKLL 668 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~l 668 (948)
..++|++.+.||+|+||.||+|.. .+|+.||||++.... ..+.+.+|+++++.+ +|+|++++++++.++...++
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~l 83 (298)
T 1csn_A 8 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS----DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVL 83 (298)
T ss_dssp ETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT----TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEE
T ss_pred cccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC----ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEE
Confidence 356899999999999999999986 478999999986532 234688999999999 89999999999999999999
Q ss_pred EEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCC-----eEEeec
Q 002238 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR-----AKVADF 743 (948)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~-----~kl~Df 743 (948)
||||+ +++|.+++.. ....+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++. +||+||
T Consensus 84 v~e~~-~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Df 155 (298)
T 1csn_A 84 VIDLL-GPSLEDLLDL----CGRKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDF 155 (298)
T ss_dssp EEECC-CCBHHHHHHH----TTTCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEECCC
T ss_pred EEEec-CCCHHHHHHH----hccCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEeccCCCCCCCeEEEEEC
Confidence 99999 9999999853 23469999999999999999999997 89999999999999987776 999999
Q ss_pred CCceecCCCCCc------eeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHH
Q 002238 744 GLVRLAPEGKGS------IETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRR 817 (948)
Q Consensus 744 Gla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 817 (948)
|+++........ ......||+.|+|||++.+..++.++||||||+++|||++|+.||..............+..
T Consensus 156 g~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~ 235 (298)
T 1csn_A 156 GMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGE 235 (298)
T ss_dssp TTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHH
T ss_pred ccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHh
Confidence 999866544321 23456799999999999999999999999999999999999999987654332222222111
Q ss_pred hhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhhhCCCCCCCcccc
Q 002238 818 IHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELWKPTDQNSEDIY 889 (948)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~~~~~~~~~~~~~ 889 (948)
..... .. .......+.++.+++.+|++.+|++||++++|++.|+++.+..........||.
T Consensus 236 ~~~~~-~~----------~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~~~~~~~dw~ 296 (298)
T 1csn_A 236 KKQST-PL----------RELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTTEDENFDWN 296 (298)
T ss_dssp HHHHS-CH----------HHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCSCSCCGGG
T ss_pred hccCc-cH----------HHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCCCCCCccccC
Confidence 11000 00 000112235688999999999999999999999999999988777666666664
No 39
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.3e-40 Score=361.90 Aligned_cols=265 Identities=22% Similarity=0.373 Sum_probs=210.0
Q ss_pred hhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEE
Q 002238 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLL 668 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 668 (948)
+.++|++.+.||+|+||.||+|+.. +++.||||++..... .....+.+.+|+.++++++||||+++++++.+++..++
T Consensus 9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 88 (294)
T 4eqm_A 9 INERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYL 88 (294)
T ss_dssp EETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEE
T ss_pred hhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEE
Confidence 3568999999999999999999865 689999999865432 33446789999999999999999999999999999999
Q ss_pred EEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCcee
Q 002238 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 748 (948)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~ 748 (948)
||||+++++|.+++... ..+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 89 v~e~~~g~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~ 160 (294)
T 4eqm_A 89 VMEYIEGPTLSEYIESH-----GPLSVDTAINFTNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKA 160 (294)
T ss_dssp EEECCCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCSSSTT
T ss_pred EEeCCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEEeCCCccc
Confidence 99999999999998541 468999999999999999999997 8999999999999999999999999999986
Q ss_pred cCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCccccccc
Q 002238 749 APEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHKA 828 (948)
Q Consensus 749 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 828 (948)
.............||+.|+|||++.+..++.++||||||+++|||++|+.||......... . .............
T Consensus 161 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~--~---~~~~~~~~~~~~~ 235 (294)
T 4eqm_A 161 LSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIA--I---KHIQDSVPNVTTD 235 (294)
T ss_dssp C-------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHH--H---HHHSSCCCCHHHH
T ss_pred cccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHH--H---HHhhccCCCcchh
Confidence 6544333344567999999999999999999999999999999999999999876543221 1 1111100001011
Q ss_pred cCcccCCccchHHHHHHHHHHHHHhcccCCCCCC-ChHHHHHHHHhhhhh
Q 002238 829 IDPTIDLNEGILASISTVAELAGHCCAREPYQRP-DMGHAVNVLSSLVEL 877 (948)
Q Consensus 829 ~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RP-t~~ev~~~L~~~~~~ 877 (948)
.. ...+..+.+++.+|++.||.+|| +++++.+.|+.+...
T Consensus 236 ~~---------~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~ 276 (294)
T 4eqm_A 236 VR---------KDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHE 276 (294)
T ss_dssp SC---------TTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSS
T ss_pred cc---------cCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhh
Confidence 11 12235688999999999999999 899999998887643
No 40
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=1.5e-40 Score=366.02 Aligned_cols=261 Identities=23% Similarity=0.382 Sum_probs=213.8
Q ss_pred eeeHHHHHHhhcC----------CcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCC
Q 002238 582 VISIQVLRNVTNN----------FSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRH 650 (948)
Q Consensus 582 ~~~~~~l~~~~~~----------~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H 650 (948)
.++.++++.+++. |+..+.||+|+||.||+|+.+ +|+.||||++... .....+.+.+|+.++++++|
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h 101 (321)
T 2c30_A 24 VVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLR--KQQRRELLFNEVVIMRDYQH 101 (321)
T ss_dssp -CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETT--TCCSHHHHHHHHHHHTTCCC
T ss_pred cCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEecc--chhHHHHHHHHHHHHHhCCC
Confidence 3566777766653 677789999999999999876 7999999999764 33445778999999999999
Q ss_pred CceeeEEeEEEeCCceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccE
Q 002238 651 RHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNI 730 (948)
Q Consensus 651 ~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Ni 730 (948)
|||+++++++..++..++||||+++|+|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||
T Consensus 102 ~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~------~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NI 172 (321)
T 2c30_A 102 FNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ------VRLNEEQIATVCEAVLQALAYLHA---QGVIHRDIKSDSI 172 (321)
T ss_dssp TTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGE
T ss_pred CCcceEEEEEEECCEEEEEEecCCCCCHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHE
Confidence 9999999999999999999999999999998732 468999999999999999999997 8999999999999
Q ss_pred EEcCCCCeEEeecCCceecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhh
Q 002238 731 LLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMH 810 (948)
Q Consensus 731 ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~ 810 (948)
+++.++.+||+|||+++....... ......||+.|+|||++.+..++.++||||||+++|||++|+.||......+..
T Consensus 173 ll~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~- 250 (321)
T 2c30_A 173 LLTLDGRVKLSDFGFCAQISKDVP-KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAM- 250 (321)
T ss_dssp EECTTCCEEECCCTTCEECCSSSC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH-
T ss_pred EECCCCcEEEeeeeeeeecccCcc-ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-
Confidence 999999999999999986654322 234567999999999999999999999999999999999999999876543321
Q ss_pred HHHHHHHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 811 LVTWFRRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 811 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
..+... ..+.+. ........+.+++.+|++.||++||++.++++.
T Consensus 251 --~~~~~~----------~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 251 --KRLRDS----------PPPKLK---NSHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp --HHHHHS----------SCCCCT---TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred --HHHhcC----------CCCCcC---ccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111110 111111 111223458899999999999999999999773
No 41
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=2.7e-40 Score=368.57 Aligned_cols=254 Identities=24% Similarity=0.344 Sum_probs=209.6
Q ss_pred hhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCCh----hhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCc
Q 002238 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISG----KGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNE 665 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 665 (948)
+.++|++.+.||+|+||.||+|+.+ +|+.||||++....... ...+.+.+|+.++++++||||+++++++.++..
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 89 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD 89 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence 4678999999999999999999875 68999999998654322 235789999999999999999999999999999
Q ss_pred eEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCC----CeEEe
Q 002238 666 KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM----RAKVA 741 (948)
Q Consensus 666 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~----~~kl~ 741 (948)
.++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++ .+||+
T Consensus 90 ~~lv~e~~~gg~L~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~~~vkl~ 161 (361)
T 2yab_A 90 VVLILELVSGGELFDFLAQ-----KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLI 161 (361)
T ss_dssp EEEEEECCCSCBHHHHHTT-----CSCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEEC
T ss_pred EEEEEEcCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeCCCCCccCEEEE
Confidence 9999999999999998832 3579999999999999999999997 8999999999999998777 79999
Q ss_pred ecCCceecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcC
Q 002238 742 DFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLS 821 (948)
Q Consensus 742 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 821 (948)
|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|..||.+....+... .+...
T Consensus 162 DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~------~i~~~ 233 (361)
T 2yab_A 162 DFGLAHEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA------NITAV 233 (361)
T ss_dssp CCSSCEECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHH------HHHTT
T ss_pred ecCCceEcCCCC--ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHH------HHHhc
Confidence 999998765532 2344679999999999999999999999999999999999999998765433221 11111
Q ss_pred ccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 822 KDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
...+.. .........+.+++.+|+..||.+||++.|+++
T Consensus 234 ~~~~~~---------~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 234 SYDFDE---------EFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp CCCCCH---------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCCCCc---------hhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 111110 111122346889999999999999999999876
No 42
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=2.6e-40 Score=361.64 Aligned_cols=264 Identities=25% Similarity=0.435 Sum_probs=208.5
Q ss_pred hcCCcccceecccCceEEEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFE 671 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 671 (948)
.++|++.+.||+|+||.||+|+++ ..+|||+++.........+.+.+|++++++++||||+++++++. .+..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence 467999999999999999999864 46999998875555666788999999999999999999999865 556899999
Q ss_pred ecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceecCC
Q 002238 672 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE 751 (948)
Q Consensus 672 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~~~ 751 (948)
|+++++|.+++.. ....+++.+++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 112 ~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~ 184 (307)
T 3lb7_A 112 WCEGSSLYKHLHV----QETKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp CCSSCBHHHHHHT----SCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCSSSEEECTTSCEEECCCCSSCC---
T ss_pred cCCCCcHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHh---CCEeeCCCChhhEEEcCCCCEEEccCCCceeccc
Confidence 9999999998843 34679999999999999999999997 7999999999999999999999999999985443
Q ss_pred C-CCceeeeecccccccCceecc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCcccccc
Q 002238 752 G-KGSIETRIAGTFGYLAPEYAV---TGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHK 827 (948)
Q Consensus 752 ~-~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 827 (948)
. .........||+.|+|||++. +..++.++||||||+++|||++|+.||......+... ...... .
T Consensus 185 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~--~~~~~~-~------- 254 (307)
T 3lb7_A 185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQII--FMVGRG-Y------- 254 (307)
T ss_dssp ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHH--HHHHHT-C-------
T ss_pred ccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHH--HHHhcC-C-------
Confidence 2 122234457999999999986 5678999999999999999999999998765433221 111110 0
Q ss_pred ccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhhh
Q 002238 828 AIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELW 878 (948)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~~ 878 (948)
..+.+ .......+..+.+++.+|++.+|++||++.++++.|+.+...+
T Consensus 255 -~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~ 302 (307)
T 3lb7_A 255 -ASPDL--SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp -CCCCS--TTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred -CCcch--hhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhc
Confidence 01111 0111122356889999999999999999999999999987544
No 43
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=4.1e-41 Score=379.18 Aligned_cols=260 Identities=27% Similarity=0.415 Sum_probs=212.6
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 670 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 670 (948)
.++|++.+.||+|+||.||+|+++ +++.||||+++.. ......++|.+|++++++++||||+++++++.+++..++||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 191 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRET-LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM 191 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTT-SCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEcccc-CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence 457888999999999999999986 7899999998754 23444567899999999999999999999999999999999
Q ss_pred EecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceecC
Q 002238 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 750 (948)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~~ 750 (948)
||+++|+|.+++... ...+++.+++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 192 e~~~~g~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~ 264 (377)
T 3cbl_A 192 ELVQGGDFLTFLRTE----GARLRVKTLLQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNVLKISDFGMSREEA 264 (377)
T ss_dssp ECCTTCBHHHHHHHH----GGGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECT
T ss_pred EcCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCcCCcccCHHHEEEcCCCcEEECcCCCceecC
Confidence 999999999998542 2458999999999999999999997 899999999999999999999999999998654
Q ss_pred CCCCce-eeeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHhhcCccccccc
Q 002238 751 EGKGSI-ETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDESQPEESMHLVTWFRRIHLSKDSFHKA 828 (948)
Q Consensus 751 ~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 828 (948)
...... .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+....+ .. ...
T Consensus 265 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~---~~----~~~---- 333 (377)
T 3cbl_A 265 DGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFV---EK----GGR---- 333 (377)
T ss_dssp TSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHH---HT----TCC----
T ss_pred CCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH---Hc----CCC----
Confidence 322111 112235788999999999999999999999999999998 99999876544322111 11 000
Q ss_pred cCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhh
Q 002238 829 IDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVEL 877 (948)
Q Consensus 829 ~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~ 877 (948)
+... ...+.++.+++.+||+.||++||+++++++.|+++.+.
T Consensus 334 ----~~~~---~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 334 ----LPCP---ELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp ----CCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----CCCC---CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 0001 11234688999999999999999999999999998754
No 44
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-40 Score=366.87 Aligned_cols=253 Identities=20% Similarity=0.302 Sum_probs=209.7
Q ss_pred hhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEE
Q 002238 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 669 (948)
+.++|++.+.||+|+||.||+|... +++.||+|++... ......+.+|+++++.++||||+++++++.+.+..++|
T Consensus 3 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 79 (321)
T 1tki_A 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK---GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMI 79 (321)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC---THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC---cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEE
Confidence 4578999999999999999999875 6889999998753 34456789999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcC--CCCeEEeecCCce
Q 002238 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD--DMRAKVADFGLVR 747 (948)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~--~~~~kl~DfGla~ 747 (948)
|||+++|+|.+++.. ....+++.+++.++.|++.||+|||+ .+|+||||||+|||++. ++.+||+|||+++
T Consensus 80 ~e~~~g~~L~~~l~~----~~~~~~~~~~~~i~~qi~~al~~lH~---~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~ 152 (321)
T 1tki_A 80 FEFISGLDIFERINT----SAFELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQAR 152 (321)
T ss_dssp ECCCCCCBHHHHHTS----SSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCTTCE
T ss_pred EEeCCCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEccCCCCCEEEEECCCCe
Confidence 999999999998832 33578999999999999999999997 89999999999999987 7899999999998
Q ss_pred ecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCcccccc
Q 002238 748 LAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHK 827 (948)
Q Consensus 748 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 827 (948)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+....+ ......+.
T Consensus 153 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i------~~~~~~~~- 223 (321)
T 1tki_A 153 QLKPGD--NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENI------MNAEYTFD- 223 (321)
T ss_dssp ECCTTC--EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH------HHTCCCCC-
T ss_pred ECCCCC--ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHH------HcCCCCCC-
Confidence 765433 344567999999999999988999999999999999999999999876543322111 11111110
Q ss_pred ccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 828 AIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
.........++.+++.+|++.||.+|||+.|+++.
T Consensus 224 --------~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 224 --------EEAFKEISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp --------HHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred --------hhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 01111223568899999999999999999999884
No 45
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=2.9e-40 Score=360.81 Aligned_cols=265 Identities=22% Similarity=0.383 Sum_probs=205.7
Q ss_pred hhcCCcccceecccCceEEEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHh--cCCCceeeEEeEEEeC----C
Q 002238 591 VTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTK--VRHRHLVALLGHCLDG----N 664 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~----~ 664 (948)
..++|++.+.||+|+||.||+|++ +|+.||||++... ....+.+|.+++.. ++||||+++++++.+. .
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~ 79 (301)
T 3q4u_A 6 VARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR-----DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSST 79 (301)
T ss_dssp CGGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG-----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEE
T ss_pred ccCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc-----cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCc
Confidence 467899999999999999999988 4899999998642 34556677777776 7999999999987653 4
Q ss_pred ceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcc-----CCCeeecCCCCccEEEcCCCCeE
Q 002238 665 EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLA-----HQSFIHRDLKPSNILLGDDMRAK 739 (948)
Q Consensus 665 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-----~~~ivHrDik~~Nill~~~~~~k 739 (948)
..++||||+++|+|.+++.. ..+++..+++++.|++.||+|||+.. +++|+||||||+|||++.++.+|
T Consensus 80 ~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~k 153 (301)
T 3q4u_A 80 QLWLITHYHEMGSLYDYLQL------TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCC 153 (301)
T ss_dssp EEEEEECCCTTCBHHHHHTT------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEE
T ss_pred eeEEehhhccCCCHHHHHhh------cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEE
Confidence 57899999999999999832 47999999999999999999999211 28999999999999999999999
Q ss_pred EeecCCceecCCCCCce---eeeecccccccCceecccC------CCCchhhHHHHHHHHHHHHhC----------CCCC
Q 002238 740 VADFGLVRLAPEGKGSI---ETRIAGTFGYLAPEYAVTG------RVTTKVDVFSFGVILMELITG----------RKAL 800 (948)
Q Consensus 740 l~DfGla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~s~Gv~l~elltg----------~~p~ 800 (948)
|+|||+++......... .....||+.|+|||++.+. .++.++||||||+++|||++| +.||
T Consensus 154 l~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf 233 (301)
T 3q4u_A 154 IADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPF 233 (301)
T ss_dssp ECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred EeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccc
Confidence 99999998655443322 2234799999999999876 456799999999999999999 8888
Q ss_pred CCCCchhhhhHHHHHHHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhh
Q 002238 801 DESQPEESMHLVTWFRRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSL 874 (948)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~ 874 (948)
....+...... . ...... .....+.++...........+.+++.+||+.||++|||+.+|++.|+++
T Consensus 234 ~~~~~~~~~~~-~-~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 234 YDVVPNDPSFE-D-MRKVVC-----VDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp TTTSCSSCCHH-H-HHHHHT-----TSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred cccCCCCcchh-h-hhHHHh-----ccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 66543221111 1 111111 0111222222223334567799999999999999999999999999875
No 46
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.3e-40 Score=359.98 Aligned_cols=257 Identities=24% Similarity=0.414 Sum_probs=210.3
Q ss_pred hcCCcccceecccCceEEEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFE 671 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 671 (948)
.++|++.+.||+|+||.||+|+++++..||||++.... ...+++.+|++++++++||||+++++++.+++..++|||
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 99 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS---MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE 99 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS---BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC---CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEe
Confidence 46789999999999999999999888899999997642 234678999999999999999999999999999999999
Q ss_pred ecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceecCC
Q 002238 672 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE 751 (948)
Q Consensus 672 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~~~ 751 (948)
|+++++|.+++... ...+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 100 ~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 172 (283)
T 3gen_A 100 YMANGCLLNYLREM----RHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 172 (283)
T ss_dssp CCTTCBHHHHHHCG----GGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCC
T ss_pred ccCCCcHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCccceEEEcCCCCEEEccccccccccc
Confidence 99999999998542 2468999999999999999999997 8999999999999999999999999999986544
Q ss_pred CCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHhhcCccccccccC
Q 002238 752 GKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDESQPEESMHLVTWFRRIHLSKDSFHKAID 830 (948)
Q Consensus 752 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 830 (948)
..........+|+.|+|||++.+..++.++||||||+++|||++ |+.||......+....+ .... ....
T Consensus 173 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~------~~~~----~~~~ 242 (283)
T 3gen_A 173 DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI------AQGL----RLYR 242 (283)
T ss_dssp HHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH------HTTC----CCCC
T ss_pred cccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHH------hccc----CCCC
Confidence 32222233457889999999999999999999999999999998 99999876644322211 1100 0000
Q ss_pred cccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhh
Q 002238 831 PTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVE 876 (948)
Q Consensus 831 ~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~ 876 (948)
+ ......+.+++.+|++.+|++||++.++++.|+++.+
T Consensus 243 ~--------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~ 280 (283)
T 3gen_A 243 P--------HLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 280 (283)
T ss_dssp C--------TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred C--------CcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhh
Confidence 1 1112458899999999999999999999999999875
No 47
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.8e-40 Score=372.74 Aligned_cols=260 Identities=24% Similarity=0.447 Sum_probs=202.3
Q ss_pred hcCCcccceecccCceEEEEEEEc----CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH----DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKL 667 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 667 (948)
.++|++.+.||+|+||.||+|+++ ++..||||+++... .....++|.+|+.++++++||||+++++++.+++..+
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 122 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM 122 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceE
Confidence 457999999999999999999864 57789999987642 4455678999999999999999999999999999999
Q ss_pred EEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCce
Q 002238 668 LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 747 (948)
Q Consensus 668 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~ 747 (948)
+||||+++|+|.+++.. ....+++.+++.++.||++||+|||+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 123 lv~e~~~~~sL~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 195 (373)
T 2qol_A 123 IVTEYMENGSLDSFLRK----HDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGR 195 (373)
T ss_dssp EEEECCTTCBHHHHHHT----TTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC----
T ss_pred EEEeCCCCCcHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEEcCCCCEEECcCcccc
Confidence 99999999999999853 23578999999999999999999997 899999999999999999999999999998
Q ss_pred ecCCCCCce--eeeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHhhcCccc
Q 002238 748 LAPEGKGSI--ETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDESQPEESMHLVTWFRRIHLSKDS 824 (948)
Q Consensus 748 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 824 (948)
......... .....+|+.|+|||++.+..++.++||||||+++|||++ |+.||......+....+ . . ...
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i---~---~-~~~ 268 (373)
T 2qol_A 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV---D---E-GYR 268 (373)
T ss_dssp ------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHH---H---T-TEE
T ss_pred ccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH---H---c-CCC
Confidence 665432211 122345788999999999999999999999999999998 99999876543322111 1 0 000
Q ss_pred cccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhh
Q 002238 825 FHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVEL 877 (948)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~ 877 (948)
. .. ....+..+.+++.+|++.+|.+||++.+|++.|+.+.+.
T Consensus 269 ~----~~-------~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~ 310 (373)
T 2qol_A 269 L----PP-------PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310 (373)
T ss_dssp C----CC-------CTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred C----CC-------CccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence 0 00 112234688999999999999999999999999998763
No 48
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=3.4e-40 Score=361.63 Aligned_cols=269 Identities=24% Similarity=0.332 Sum_probs=205.4
Q ss_pred hhcCCcccceecccCceEEEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEEE
Q 002238 591 VTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 670 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 670 (948)
..++|++.+.||+|+||.||+|+.++|+.||||++............+.+|++++++++||||+++++++.+++..++||
T Consensus 19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 98 (311)
T 3niz_A 19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF 98 (311)
T ss_dssp SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence 45789999999999999999999988999999999765444444678899999999999999999999999999999999
Q ss_pred EecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceecC
Q 002238 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 750 (948)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~~ 750 (948)
||++ |+|.+.+.. ....+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 99 e~~~-~~l~~~~~~----~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 170 (311)
T 3niz_A 99 EFME-KDLKKVLDE----NKTGLQDSQIKIYLYQLLRGVAHCHQ---HRILHRDLKPQNLLINSDGALKLADFGLARAFG 170 (311)
T ss_dssp ECCS-EEHHHHHHT----CTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEETT
T ss_pred cCCC-CCHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCchHhEEECCCCCEEEccCcCceecC
Confidence 9997 488777743 33568999999999999999999997 899999999999999999999999999998764
Q ss_pred CCCCceeeeecccccccCceeccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCcccccccc
Q 002238 751 EGKGSIETRIAGTFGYLAPEYAVT-GRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHKAI 829 (948)
Q Consensus 751 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 829 (948)
.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+....+........ ...+....
T Consensus 171 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~ 248 (311)
T 3niz_A 171 IPVR-SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPN-PREWPQVQ 248 (311)
T ss_dssp SCCC----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCC-TTTSGGGT
T ss_pred CCcc-cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCC-hHHhhhhh
Confidence 4322 2344568999999999876 5689999999999999999999999987665443222211110000 00000000
Q ss_pred ------C---cccC---CccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 830 ------D---PTID---LNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 830 ------~---~~~~---~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
+ .... ..........++.+++.+|++.||++|||++|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 249 ELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp TSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred ccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 0 0000 00001112346889999999999999999999986
No 49
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=2e-40 Score=370.84 Aligned_cols=256 Identities=23% Similarity=0.363 Sum_probs=211.3
Q ss_pred HhhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEE
Q 002238 590 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLL 668 (948)
Q Consensus 590 ~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 668 (948)
...++|++.+.||+|+||.||+|..+ +|+.||||++..........+.+.+|++++++++||||+++++++.+++..++
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 105 (362)
T 2bdw_A 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 105 (362)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 34578999999999999999999875 68999999998765566667889999999999999999999999999999999
Q ss_pred EEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCC---CeEEeecCC
Q 002238 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM---RAKVADFGL 745 (948)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~---~~kl~DfGl 745 (948)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++ .+||+|||+
T Consensus 106 v~e~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~ 177 (362)
T 2bdw_A 106 VFDLVTGGELFEDIVA-----REFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGL 177 (362)
T ss_dssp EECCCCSCBHHHHHTT-----CSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred EEecCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEeecCc
Confidence 9999999999988842 3568999999999999999999997 8999999999999998654 599999999
Q ss_pred ceecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCcccc
Q 002238 746 VRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSF 825 (948)
Q Consensus 746 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 825 (948)
++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+.... +......+
T Consensus 178 a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~------i~~~~~~~ 249 (362)
T 2bdw_A 178 AIEVNDSE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQ------IKAGAYDY 249 (362)
T ss_dssp CBCCTTCC--SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH------HHHTCCCC
T ss_pred ceEecCCc--ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHH------HHhCCCCC
Confidence 98665432 23346799999999999999999999999999999999999999987654322111 11111111
Q ss_pred ccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 826 HKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
. .........++.+++.+|++.||++||++.+++++
T Consensus 250 ~---------~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 250 P---------SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp C---------TTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred C---------cccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 01111223568899999999999999999999875
No 50
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.2e-40 Score=373.89 Aligned_cols=284 Identities=15% Similarity=0.196 Sum_probs=214.2
Q ss_pred hhcCCcccceecccCceEEEEEEEcC------CcEEEEEEeecCcCChh---------hHHHHHHHHHHHHhcCCCceee
Q 002238 591 VTNNFSEENILGRGGFGTVYKGELHD------GTKIAVKRMEAGVISGK---------GLTEFKSEIAVLTKVRHRHLVA 655 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~~~------g~~vavK~~~~~~~~~~---------~~~~~~~E~~~l~~l~H~niv~ 655 (948)
..++|++.+.||+|+||.||+|.+++ ++.||||++........ ....+..|+..++.++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 35689999999999999999998764 47899999876421100 0112345566677788999999
Q ss_pred EEeEEEeC----CceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEE
Q 002238 656 LLGHCLDG----NEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNIL 731 (948)
Q Consensus 656 l~~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nil 731 (948)
+++++... ...++||||+ +++|.+++.. ....+++.+++.++.||+.||+|||+ .+|+||||||+|||
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~----~~~~l~~~~~~~i~~qi~~~l~~lH~---~~iiHrDlkp~Nil 184 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEA----NAKRFSRKTVLQLSLRILDILEYIHE---HEYVHGDIKASNLL 184 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHH----TTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEE
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHH---CCeEEecCCHHHEE
Confidence 99998765 4479999999 9999999853 33579999999999999999999998 79999999999999
Q ss_pred Ec--CCCCeEEeecCCceecCCCCCc------eeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 002238 732 LG--DDMRAKVADFGLVRLAPEGKGS------IETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDES 803 (948)
Q Consensus 732 l~--~~~~~kl~DfGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~ 803 (948)
++ .++.+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+.
T Consensus 185 l~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~ 264 (364)
T 3op5_A 185 LNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDN 264 (364)
T ss_dssp EESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred EecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence 99 8899999999999865432211 123455999999999999999999999999999999999999999864
Q ss_pred CchhhhhHHHHHHHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhhhCCCCC
Q 002238 804 QPEESMHLVTWFRRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELWKPTDQ 883 (948)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~~~~~~~ 883 (948)
...... ........ .......+++.+.. ...+.++.+++..|++.+|.+||++.++++.|+++.+.......
T Consensus 265 ~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~----~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~~~~ 336 (364)
T 3op5_A 265 LKDPKY--VRDSKIRY--RENIASLMDKCFPA----ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKDD 336 (364)
T ss_dssp TTCHHH--HHHHHHHH--HHCHHHHHHHHSCT----TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCCC
T ss_pred ccCHHH--HHHHHHHh--hhhHHHHHHHhccc----ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCcC
Confidence 332211 11111000 01111222211110 11234688999999999999999999999999999998887777
Q ss_pred CCccccc
Q 002238 884 NSEDIYG 890 (948)
Q Consensus 884 ~~~~~~~ 890 (948)
...||.-
T Consensus 337 ~~~dw~~ 343 (364)
T 3op5_A 337 GKLDLSV 343 (364)
T ss_dssp CCCCC--
T ss_pred CccceEe
Confidence 7666653
No 51
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-40 Score=370.24 Aligned_cols=269 Identities=29% Similarity=0.446 Sum_probs=215.2
Q ss_pred HHhhcCCcccceecccCceEEEEEEEc------CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEe
Q 002238 589 RNVTNNFSEENILGRGGFGTVYKGELH------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLD 662 (948)
Q Consensus 589 ~~~~~~~~~~~~lg~G~fg~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 662 (948)
....++|++.+.||+|+||.||+|+.. +++.||||+++... .....+.+.+|++++++++||||+++++++.+
T Consensus 43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 121 (343)
T 1luf_A 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDNPNIVKLLGVCAV 121 (343)
T ss_dssp BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence 345688999999999999999999875 34889999997642 44456789999999999999999999999999
Q ss_pred CCceEEEEEecCCCChhHHHHhhhhc-------------------CCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeec
Q 002238 663 GNEKLLVFEYMPQGTLSRHIFNWAEE-------------------GLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHR 723 (948)
Q Consensus 663 ~~~~~lv~e~~~~gsL~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHr 723 (948)
++..++||||+++|+|.+++...... ....+++.+++.++.||++||+|||+ .+|+||
T Consensus 122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~---~~ivH~ 198 (343)
T 1luf_A 122 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHR 198 (343)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCS
T ss_pred CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecC
Confidence 99999999999999999998653211 12578999999999999999999997 899999
Q ss_pred CCCCccEEEcCCCCeEEeecCCceecCCCCC-ceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCC
Q 002238 724 DLKPSNILLGDDMRAKVADFGLVRLAPEGKG-SIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALD 801 (948)
Q Consensus 724 Dik~~Nill~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~ 801 (948)
||||+||+++.++.+||+|||+++....... .......||+.|+|||++.+..++.++||||||+++|||++ |+.||.
T Consensus 199 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 278 (343)
T 1luf_A 199 DLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYY 278 (343)
T ss_dssp CCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred CCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCC
Confidence 9999999999999999999999985432211 22334568999999999999999999999999999999999 999998
Q ss_pred CCCchhhhhHHHHHHHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhhhC
Q 002238 802 ESQPEESMHLVTWFRRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELWK 879 (948)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~~~ 879 (948)
.....+....+ .. ..... .. ...+..+.+++.+|++.||++||++.++++.|+++.+.+.
T Consensus 279 ~~~~~~~~~~~------~~--~~~~~-~~---------~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~ 338 (343)
T 1luf_A 279 GMAHEEVIYYV------RD--GNILA-CP---------ENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAE 338 (343)
T ss_dssp TSCHHHHHHHH------HT--TCCCC-CC---------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC---
T ss_pred CCChHHHHHHH------hC--CCcCC-CC---------CCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhh
Confidence 76543322111 11 11000 00 1223468899999999999999999999999999876553
No 52
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.8e-40 Score=362.79 Aligned_cols=254 Identities=23% Similarity=0.362 Sum_probs=208.4
Q ss_pred hhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCCh----hhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCc
Q 002238 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISG----KGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNE 665 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 665 (948)
+.++|++.+.||+|+||.||+|..+ +|+.||||++....... ...+.+.+|+.++++++||||+++++++.++..
T Consensus 9 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 88 (326)
T 2y0a_A 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD 88 (326)
T ss_dssp HHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred cccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence 3467999999999999999999875 68999999997653221 235789999999999999999999999999999
Q ss_pred eEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCC----CeEEe
Q 002238 666 KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM----RAKVA 741 (948)
Q Consensus 666 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~----~~kl~ 741 (948)
.++||||+++|+|.+++.. ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++ .+||+
T Consensus 89 ~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~ 160 (326)
T 2y0a_A 89 VILILELVAGGELFDFLAE-----KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKII 160 (326)
T ss_dssp EEEEEECCCSCBHHHHHTT-----SSCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCSSSSSCCEEEC
T ss_pred EEEEEEcCCCCCHHHHHHh-----cCCcCHHHHHHHHHHHHHHHHHHHH---CCeEcCCCCHHHEEEecCCCCCCCEEEE
Confidence 9999999999999998832 3578999999999999999999997 8999999999999999887 79999
Q ss_pred ecCCceecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcC
Q 002238 742 DFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLS 821 (948)
Q Consensus 742 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 821 (948)
|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+....+ ...
T Consensus 161 Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~---~~~--- 232 (326)
T 2y0a_A 161 DFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV---SAV--- 232 (326)
T ss_dssp CCTTCEECCTTS--CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHH---HHT---
T ss_pred ECCCCeECCCCC--ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHH---Hhc---
Confidence 999998765432 233457999999999999999999999999999999999999999876543322111 110
Q ss_pred ccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 822 KDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
...+. ..........+.+++.+|++.||++||++.++++
T Consensus 233 ~~~~~---------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 233 NYEFE---------DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp CCCCC---------HHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CCCcC---------ccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 11010 0111122345889999999999999999999987
No 53
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=6.8e-40 Score=374.97 Aligned_cols=257 Identities=22% Similarity=0.307 Sum_probs=210.3
Q ss_pred HhhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEE
Q 002238 590 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLL 668 (948)
Q Consensus 590 ~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 668 (948)
...++|++.+.||+|+||.||+|... +|+.||+|++..........+.+.+|+++++.++||||+++++++.+++..++
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 87 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL 87 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence 34678999999999999999999864 78999999998765555667789999999999999999999999999999999
Q ss_pred EEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEc---CCCCeEEeecCC
Q 002238 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLG---DDMRAKVADFGL 745 (948)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~---~~~~~kl~DfGl 745 (948)
||||+++|+|.+.+.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++ .++.+||+|||+
T Consensus 88 v~E~~~gg~L~~~i~~-----~~~~~e~~~~~i~~qil~aL~~lH~---~givHrDlKp~NIll~~~~~~~~vkL~DFG~ 159 (444)
T 3soa_A 88 IFDLVTGGELFEDIVA-----REYYSEADASHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGL 159 (444)
T ss_dssp EECCCBCCBHHHHHHH-----CSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSSTTEEESBSSTTCCEEECCCSS
T ss_pred EEEeCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEeccCCCCcEEEccCce
Confidence 9999999999988853 2568999999999999999999997 8999999999999998 467899999999
Q ss_pred ceecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCcccc
Q 002238 746 VRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSF 825 (948)
Q Consensus 746 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 825 (948)
++....... ......||+.|+|||++.+..++.++||||+||++|||++|++||......+....+ ......+
T Consensus 160 a~~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i------~~~~~~~ 232 (444)
T 3soa_A 160 AIEVEGEQQ-AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQI------KAGAYDF 232 (444)
T ss_dssp CBCCCTTCC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH------HHTCCCC
T ss_pred eEEecCCCc-eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHH------HhCCCCC
Confidence 986654332 234567999999999999999999999999999999999999999876543322111 1111111
Q ss_pred ccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 826 HKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
. .+ .......++.+++.+|++.||.+||++.|+++.
T Consensus 233 ~---~~------~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 233 P---SP------EWDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp C---TT------TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred C---cc------ccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 1 01 111223468899999999999999999999873
No 54
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=3.7e-40 Score=380.15 Aligned_cols=261 Identities=30% Similarity=0.486 Sum_probs=208.1
Q ss_pred hcCCcccceecccCceEEEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFE 671 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 671 (948)
.++|++.+.||+|+||.||+|.++++..||||+++... ...++|.+|++++++++||||+++++++.+ +..++|||
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e 258 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 258 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC---CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEeh
Confidence 46788899999999999999999878889999997642 235689999999999999999999999876 67899999
Q ss_pred ecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceecCC
Q 002238 672 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE 751 (948)
Q Consensus 672 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~~~ 751 (948)
|+++|+|.+++... ....+++.+++.++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++....
T Consensus 259 ~~~~gsL~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 332 (452)
T 1fmk_A 259 YMSKGSLLDFLKGE---TGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIED 332 (452)
T ss_dssp CCTTCBHHHHHSHH---HHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCTTC----
T ss_pred hhcCCCHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEECCCCCEEECCCccceecCC
Confidence 99999999999542 12468999999999999999999997 8999999999999999999999999999986654
Q ss_pred CCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHhhcCccccccccC
Q 002238 752 GKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDESQPEESMHLVTWFRRIHLSKDSFHKAID 830 (948)
Q Consensus 752 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 830 (948)
..........+|+.|+|||++.+..++.++||||||+++|||++ |+.||.+....+....+ .. . .....
T Consensus 333 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i------~~-~--~~~~~- 402 (452)
T 1fmk_A 333 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV------ER-G--YRMPC- 402 (452)
T ss_dssp ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH------HT-T--CCCCC-
T ss_pred CceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHH------Hc-C--CCCCC-
Confidence 33333334557889999999999999999999999999999999 99999876544322111 11 0 00000
Q ss_pred cccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhhhCC
Q 002238 831 PTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELWKP 880 (948)
Q Consensus 831 ~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~~~~ 880 (948)
....+..+.+++.+||+.+|++||+++++++.|+.+.....+
T Consensus 403 --------~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~~ 444 (452)
T 1fmk_A 403 --------PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 444 (452)
T ss_dssp --------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCC
T ss_pred --------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCCc
Confidence 012234688999999999999999999999999998754443
No 55
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=2.7e-40 Score=359.97 Aligned_cols=266 Identities=24% Similarity=0.432 Sum_probs=206.4
Q ss_pred hcCCcccceecccCceEEEEEEE-----cCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC--C
Q 002238 592 TNNFSEENILGRGGFGTVYKGEL-----HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG--N 664 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~ 664 (948)
.++|++.+.||+|+||.||+|++ .+++.||||++... .....+.+.+|++++++++||||+++++++... .
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 86 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 86 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHT
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 46799999999999999999984 26899999998754 455567899999999999999999999998653 5
Q ss_pred ceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecC
Q 002238 665 EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 744 (948)
Q Consensus 665 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfG 744 (948)
..++||||+++|+|.+++... ...+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 87 ~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg 159 (295)
T 3ugc_A 87 NLKLIMEYLPYGSLRDYLQKH----KERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFG 159 (295)
T ss_dssp SCEEEEECCTTCBHHHHHHHC----GGGCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCC
T ss_pred ceEEEEEeCCCCCHHHHHHhc----ccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHhhEEEcCCCeEEEccCc
Confidence 689999999999999998542 2358999999999999999999997 899999999999999999999999999
Q ss_pred CceecCCCCC--ceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhh---------hhHHH
Q 002238 745 LVRLAPEGKG--SIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEES---------MHLVT 813 (948)
Q Consensus 745 la~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~---------~~~~~ 813 (948)
+++....... .......||..|+|||++.+..++.++||||||+++|||++|..|+........ .....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (295)
T 3ugc_A 160 LTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF 239 (295)
T ss_dssp SCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHH
T ss_pred ccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHH
Confidence 9986644322 122334577889999999999999999999999999999999999865321100 00000
Q ss_pred HHHHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhh
Q 002238 814 WFRRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVEL 877 (948)
Q Consensus 814 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~ 877 (948)
.......... ... .....+.++.+++.+||+.||++||++.|+++.|+++.+.
T Consensus 240 ~~~~~~~~~~--------~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 240 HLIELLKNNG--------RLP---RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp HHHHHHHTTC--------CCC---CCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHhccC--------cCC---CCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 0000000000 000 0112335688999999999999999999999999998754
No 56
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=5.5e-40 Score=362.73 Aligned_cols=251 Identities=26% Similarity=0.375 Sum_probs=207.4
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 669 (948)
.++|+..+.||+|+||.||+|+.+ +|+.||||++++... .......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 367999999999999999999875 689999999976422 233457789999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceec
Q 002238 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (948)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~ 749 (948)
|||+++|+|.+++.. ...+++.++..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 84 ~E~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 155 (337)
T 1o6l_A 84 MEYANGGELFFHLSR-----ERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEG 155 (337)
T ss_dssp EECCTTCBHHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred EeCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCCHHHEEECCCCCEEEeeccchhhc
Confidence 999999999988853 1468999999999999999999997 89999999999999999999999999999854
Q ss_pred CCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCcccccccc
Q 002238 750 PEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHKAI 829 (948)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 829 (948)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...........+ ......+.
T Consensus 156 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i------~~~~~~~p--- 225 (337)
T 1o6l_A 156 ISDG-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI------LMEEIRFP--- 225 (337)
T ss_dssp CCTT-CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH------HHCCCCCC---
T ss_pred ccCC-CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHH------HcCCCCCC---
Confidence 3322 2334567999999999999999999999999999999999999999876543322111 11111111
Q ss_pred CcccCCccchHHHHHHHHHHHHHhcccCCCCCC-----ChHHHHHH
Q 002238 830 DPTIDLNEGILASISTVAELAGHCCAREPYQRP-----DMGHAVNV 870 (948)
Q Consensus 830 ~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RP-----t~~ev~~~ 870 (948)
. ....++.+++.+|++.||++|| +++|++++
T Consensus 226 -~---------~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 226 -R---------TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp -T---------TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred -C---------CCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 1 1224588999999999999999 88888764
No 57
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=2.2e-40 Score=382.54 Aligned_cols=257 Identities=26% Similarity=0.429 Sum_probs=211.7
Q ss_pred hcCCcccceecccCceEEEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFE 671 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 671 (948)
.++|++.+.||+|+||.||+|.++++..||||+++.. ....+.|.+|++++++++||||+++++++. .+..++|||
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e 262 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG---SMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITE 262 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTT---SBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEC
T ss_pred hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCC---CccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEe
Confidence 5678899999999999999999988899999999764 234678999999999999999999999986 667899999
Q ss_pred ecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceecCC
Q 002238 672 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE 751 (948)
Q Consensus 672 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~~~ 751 (948)
|+++|+|.+++.... ...+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++....
T Consensus 263 ~~~~g~L~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~ 336 (454)
T 1qcf_A 263 FMAKGSLLDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIED 336 (454)
T ss_dssp CCTTCBHHHHHHSHH---HHTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCC
T ss_pred ecCCCcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEEECCCCcEEEeeCCCceEcCC
Confidence 999999999996422 1357889999999999999999997 7999999999999999999999999999986543
Q ss_pred CCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHhhcCccccccccC
Q 002238 752 GKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDESQPEESMHLVTWFRRIHLSKDSFHKAID 830 (948)
Q Consensus 752 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 830 (948)
..........+|+.|+|||++....++.++|||||||++|||+| |+.||.+....+....+ ... ..
T Consensus 337 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i---~~~----~~------ 403 (454)
T 1qcf_A 337 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL---ERG----YR------ 403 (454)
T ss_dssp HHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH---HHT----CC------
T ss_pred CceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHH---HcC----CC------
Confidence 22112233446789999999999999999999999999999999 99999876544332211 110 00
Q ss_pred cccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhh
Q 002238 831 PTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVE 876 (948)
Q Consensus 831 ~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~ 876 (948)
+.. ....+.++.+++.+||+.||++||++.+|++.|+.+..
T Consensus 404 --~~~---~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~ 444 (454)
T 1qcf_A 404 --MPR---PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT 444 (454)
T ss_dssp --CCC---CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred --CCC---CCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence 000 11223468899999999999999999999999998864
No 58
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=368.30 Aligned_cols=267 Identities=28% Similarity=0.419 Sum_probs=217.0
Q ss_pred hcCCcccceecccCceEEEEEEEc--------CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEe
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH--------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLD 662 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~--------~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~ 662 (948)
.++|.+.+.||+|+||.||+|+.. ++..||||++... ......+++.+|+++++++ +||||+++++++.+
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccc-cCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 468899999999999999999863 2367999999764 3455568899999999999 99999999999999
Q ss_pred CCceEEEEEecCCCChhHHHHhhhhc-----------CCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEE
Q 002238 663 GNEKLLVFEYMPQGTLSRHIFNWAEE-----------GLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNIL 731 (948)
Q Consensus 663 ~~~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nil 731 (948)
++..++||||+++|+|.+++...... ....+++.+++.++.|++.||+|||+ .+|+||||||+|||
T Consensus 147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIl 223 (382)
T 3tt0_A 147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVL 223 (382)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEE
T ss_pred CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCcceEE
Confidence 99999999999999999999653211 12468999999999999999999997 79999999999999
Q ss_pred EcCCCCeEEeecCCceecCCCCC-ceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchhhh
Q 002238 732 LGDDMRAKVADFGLVRLAPEGKG-SIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDESQPEESM 809 (948)
Q Consensus 732 l~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~ 809 (948)
++.++.+||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||++ |+.||......+..
T Consensus 224 l~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~ 303 (382)
T 3tt0_A 224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 303 (382)
T ss_dssp ECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH
T ss_pred EcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 99999999999999986544322 22334567899999999999999999999999999999999 99999876544322
Q ss_pred hHHHHHHHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhhhCC
Q 002238 810 HLVTWFRRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELWKP 880 (948)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~~~~ 880 (948)
..+ .. .. ..... .....++.+++.+|++.+|++||++.++++.|+++......
T Consensus 304 ~~~---~~----~~------~~~~~-----~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~ 356 (382)
T 3tt0_A 304 KLL---KE----GH------RMDKP-----SNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSN 356 (382)
T ss_dssp HHH---HT----TC------CCCCC-----SSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCS
T ss_pred HHH---Hc----CC------CCCCC-----ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhc
Confidence 111 11 00 00000 11234688999999999999999999999999999865443
No 59
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=7.2e-40 Score=356.67 Aligned_cols=277 Identities=19% Similarity=0.259 Sum_probs=214.9
Q ss_pred HhhcCCcccceecccCceEEEEEEE-cCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEE-EeCCceE
Q 002238 590 NVTNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC-LDGNEKL 667 (948)
Q Consensus 590 ~~~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~-~~~~~~~ 667 (948)
.+.++|++.+.||+|+||.||+|+. .+++.||||++.... ....+.+|+++++.++|++++..++++ .+++..+
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (296)
T 4hgt_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT----KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 81 (296)
T ss_dssp -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEE
T ss_pred ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc----cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceE
Confidence 3567899999999999999999986 578999999876532 224588999999999988877766655 5677789
Q ss_pred EEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEE---cCCCCeEEeecC
Q 002238 668 LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL---GDDMRAKVADFG 744 (948)
Q Consensus 668 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill---~~~~~~kl~DfG 744 (948)
+||||+ +++|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+||++ +.++.+||+|||
T Consensus 82 lv~e~~-~~~L~~~~~~----~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg 153 (296)
T 4hgt_A 82 MVMELL-GPSLEDLFNF----CSRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFG 153 (296)
T ss_dssp EEEECC-CCBHHHHHHH----TTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECCGGGTTCEEECCCT
T ss_pred EEEEcc-CCCHHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeeeeccCCCCeEEEecCc
Confidence 999999 9999998843 23569999999999999999999997 899999999999999 788999999999
Q ss_pred CceecCCCCCc------eeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHh
Q 002238 745 LVRLAPEGKGS------IETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRI 818 (948)
Q Consensus 745 la~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 818 (948)
+++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||..................
T Consensus 154 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 233 (296)
T 4hgt_A 154 LAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEK 233 (296)
T ss_dssp TCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHH
T ss_pred cceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcc
Confidence 99866544321 223467999999999999999999999999999999999999999875543332222211111
Q ss_pred hcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhhhCCCCCCCcccc
Q 002238 819 HLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELWKPTDQNSEDIY 889 (948)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~~~~~~~~~~~~~ 889 (948)
..... . .......+..+.+++.+|++.+|++||+++++++.|+++............||.
T Consensus 234 ~~~~~--~---------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~~~~~~~dw~ 293 (296)
T 4hgt_A 234 KMSTP--I---------EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWN 293 (296)
T ss_dssp HHHSC--H---------HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTCCTTCCCGGG
T ss_pred cccch--h---------hhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCCCccCccchh
Confidence 10000 0 000011234688999999999999999999999999999988877666666664
No 60
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=6.3e-40 Score=354.28 Aligned_cols=260 Identities=23% Similarity=0.363 Sum_probs=200.8
Q ss_pred hcCCcccceecccCceEEEEEEEcC----CcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELHD----GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKL 667 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~~----g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 667 (948)
.++|++.+.||+|+||.||+|.... +..||||++... ......+.+.+|+.++++++||||+++++++ .++..+
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~ 91 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC-TSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVW 91 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT-TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSCE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCccE
Confidence 5689999999999999999998742 457999998653 2445567899999999999999999999997 456789
Q ss_pred EEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCce
Q 002238 668 LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 747 (948)
Q Consensus 668 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~ 747 (948)
+||||+++|+|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 92 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 164 (281)
T 1mp8_A 92 IIMELCTLGELRSFLQV----RKYSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSR 164 (281)
T ss_dssp EEEECCTTEEHHHHHHH----TTTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC-----
T ss_pred EEEecCCCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHEEECCCCCEEECcccccc
Confidence 99999999999999853 23468999999999999999999997 899999999999999999999999999998
Q ss_pred ecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHhhcCccccc
Q 002238 748 LAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDESQPEESMHLVTWFRRIHLSKDSFH 826 (948)
Q Consensus 748 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 826 (948)
..............+|+.|+|||++.+..++.++||||||+++|||++ |..||......+....+ .. .. .
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i---~~---~~--~- 235 (281)
T 1mp8_A 165 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI---EN---GE--R- 235 (281)
T ss_dssp --------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHH---HT---TC--C-
T ss_pred ccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHH---Hc---CC--C-
Confidence 665443333344557889999999999999999999999999999997 99999876654332111 11 00 0
Q ss_pred cccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhhh
Q 002238 827 KAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELW 878 (948)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~~ 878 (948)
.... ...+..+.+++.+|++.||++||++.++++.|+.+.+..
T Consensus 236 ~~~~---------~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 278 (281)
T 1mp8_A 236 LPMP---------PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 278 (281)
T ss_dssp CCCC---------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCC---------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 0011 122346889999999999999999999999999987643
No 61
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=8.4e-41 Score=411.69 Aligned_cols=381 Identities=28% Similarity=0.396 Sum_probs=213.1
Q ss_pred CEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC-C-cCCCCCCcEEEcccccccCCCCccccCCC-CCCEEE
Q 002238 69 RITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-S-LNGLASLEVVMLSNNQFTSVPSDFFTGLS-SLQSIE 145 (948)
Q Consensus 69 ~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~-~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~ 145 (948)
+++.|+|++|++++.+|..|+++++|++|+|++|.+.+.+| . +.++++|++|+|++|.+++..|..+.+++ +|+.|+
T Consensus 295 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~ 374 (768)
T 3rgz_A 295 TLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLD 374 (768)
T ss_dssp TCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEE
T ss_pred cCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEE
Confidence 34444444444444444444444444444444444444333 1 44444444444444444444444444433 444444
Q ss_pred ccCCCCCCCCCCccccC--CCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccccCCCCccc-ccccceeccC
Q 002238 146 IDNNPFSSWEIPQSLRN--ASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSG-SQIQSLWVNG 222 (948)
Q Consensus 146 Ls~N~l~~~~~p~~~~~--l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~l~~l~~~~ 222 (948)
|++|++++ .+|..+.. +++|++|++++|++++.+|..+. .+++|++|+|++|++++.+|..+.. .+|+.|++
T Consensus 375 Ls~N~l~~-~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~--~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L-- 449 (768)
T 3rgz_A 375 LSSNNFSG-PILPNLCQNPKNTLQELYLQNNGFTGKIPPTLS--NCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKL-- 449 (768)
T ss_dssp CCSSEEEE-ECCTTTTCSTTCCCCEEECCSSEEEEECCGGGG--GCTTCCEEECCSSEEESCCCGGGGGCTTCCEEEC--
T ss_pred ccCCCcCC-CcChhhhhcccCCccEEECCCCccccccCHHHh--cCCCCCEEECcCCcccCcccHHHhcCCCCCEEEC--
Confidence 44444433 23333333 44555555555555555555554 5566666666666666666655543 22333333
Q ss_pred CCCCCccCCCccccccCCCccEEEccCCcccccCC-CCCCCCCCcEEeccCCccccccchhhhCCCCCcEEEcccCcccc
Q 002238 223 QNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQG 301 (948)
Q Consensus 223 ~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g 301 (948)
..|...+..+..+..+++|++|+|++|++++.+| .+.++++|+.|+|++|++++.+|..++.+++|++|+|++|+++|
T Consensus 450 -~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 528 (768)
T 3rgz_A 450 -WLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSG 528 (768)
T ss_dssp -CSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEE
T ss_pred -CCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccC
Confidence 3344444555666667777777777777776655 36667777777777777777777777777777777777777776
Q ss_pred cCCC-CCCccccccccccCCCCC-CCCCCCchh------------------------------------------hhhhH
Q 002238 302 PVPE-FDRSVSLDMAKGSNNFCL-PSPGACDPR------------------------------------------LNALL 337 (948)
Q Consensus 302 ~~p~-~~~~~~l~~~~~~~~~~~-~~~~~~~~~------------------------------------------~~~l~ 337 (948)
.+|. +..+.+|..++..+|... .+|...... +..+.
T Consensus 529 ~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 608 (768)
T 3rgz_A 529 NIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLS 608 (768)
T ss_dssp ECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGG
T ss_pred cCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccc
Confidence 6664 555666666666555432 222111100 00000
Q ss_pred HHHH--------------hhCC-cchhccccCCCCCCCCccceeecCCceEEEEccCCcccccCCccccCccccceEeCc
Q 002238 338 SVVK--------------LMGY-PQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILA 402 (948)
Q Consensus 338 ~~~~--------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~g~ip~~~~~l~~L~~L~Ls 402 (948)
.... .+.. ..-...+..++.-.......+..++.|+.|+|++|+++|.+|..|+++++|+.|||+
T Consensus 609 ~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs 688 (768)
T 3rgz_A 609 TRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLS 688 (768)
T ss_dssp GTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECC
T ss_pred cccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECC
Confidence 0000 0000 000001112221111111234566778888888888888888888888888888888
Q ss_pred cccccccCCcCCcCCCCCcEEEccCCcccCCCCC---CCcccccccCCCCCCCCcc
Q 002238 403 DNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPS---FKSNAIVNTDGNPDIGKEK 455 (948)
Q Consensus 403 ~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~ip~---~~~~~~~~~~gnp~~~~~~ 455 (948)
+|+++|.+|..+..+++|++|||++|+|+|.||. +.......+.|||.+|+.|
T Consensus 689 ~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~ 744 (768)
T 3rgz_A 689 SNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYP 744 (768)
T ss_dssp SSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTT
T ss_pred CCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCC
Confidence 8888888888888888888888888888888885 3445566778888888765
No 62
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=2.9e-40 Score=370.41 Aligned_cols=273 Identities=25% Similarity=0.377 Sum_probs=216.4
Q ss_pred HHHHHHhhcCCcccceecccCceEEEEEEEc------CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhc-CCCceeeEE
Q 002238 585 IQVLRNVTNNFSEENILGRGGFGTVYKGELH------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALL 657 (948)
Q Consensus 585 ~~~l~~~~~~~~~~~~lg~G~fg~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~ 657 (948)
....+...++|++.+.||+|+||.||+|++. +++.||||+++.. ......+.+.+|++++.++ +||||++++
T Consensus 14 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpniv~~~ 92 (359)
T 3vhe_A 14 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG-ATHSEHRALMSELKILIHIGHHLNVVNLL 92 (359)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCc-CCHHHHHHHHHHHHHHHhhcCCcceeeee
Confidence 3444456789999999999999999999742 4689999999764 2444567899999999999 899999999
Q ss_pred eEEEeCCc-eEEEEEecCCCChhHHHHhhhhcC-----------------------------------------------
Q 002238 658 GHCLDGNE-KLLVFEYMPQGTLSRHIFNWAEEG----------------------------------------------- 689 (948)
Q Consensus 658 ~~~~~~~~-~~lv~e~~~~gsL~~~l~~~~~~~----------------------------------------------- 689 (948)
+++.+.+. .++||||+++|+|.+++.......
T Consensus 93 ~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (359)
T 3vhe_A 93 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKS 172 (359)
T ss_dssp EEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------------
T ss_pred eeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccc
Confidence 99987654 899999999999999996532110
Q ss_pred --------------CCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceecCCCCC-
Q 002238 690 --------------LKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKG- 754 (948)
Q Consensus 690 --------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~~~~~~- 754 (948)
...+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.......
T Consensus 173 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 249 (359)
T 3vhe_A 173 LSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 249 (359)
T ss_dssp -----------CTTTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTC
T ss_pred cchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCcEEEEeccceeeecccccc
Confidence 1228999999999999999999998 7999999999999999999999999999986544332
Q ss_pred ceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHhhcCccccccccCccc
Q 002238 755 SIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDESQPEESMHLVTWFRRIHLSKDSFHKAIDPTI 833 (948)
Q Consensus 755 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 833 (948)
.......||+.|+|||++.+..++.++||||||+++|||++ |+.||......+... ...... . ....
T Consensus 250 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~--~~~~~~---~-------~~~~ 317 (359)
T 3vhe_A 250 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC--RRLKEG---T-------RMRA 317 (359)
T ss_dssp EEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHH--HHHHHT---C-------CCCC
T ss_pred hhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHH--HHHHcC---C-------CCCC
Confidence 23344678999999999999999999999999999999998 999998765433211 111110 0 0000
Q ss_pred CCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhhh
Q 002238 834 DLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELW 878 (948)
Q Consensus 834 ~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~~ 878 (948)
. .....++.+++.+|++.||++||++.|++++|+.+.+..
T Consensus 318 ~-----~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 357 (359)
T 3vhe_A 318 P-----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 357 (359)
T ss_dssp C-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred C-----CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence 0 112245889999999999999999999999999987643
No 63
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=5.1e-40 Score=356.31 Aligned_cols=266 Identities=24% Similarity=0.360 Sum_probs=203.9
Q ss_pred cCCcccceecccCceEEEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEEEEe
Q 002238 593 NNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEY 672 (948)
Q Consensus 593 ~~~~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 672 (948)
++|++.+.||+|+||.||+|+.++|+.||||++..........+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 57899999999999999999988899999999976543344457889999999999999999999999999999999999
Q ss_pred cCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceecCCC
Q 002238 673 MPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEG 752 (948)
Q Consensus 673 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~~~~ 752 (948)
+++ +|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 82 ~~~-~l~~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 153 (288)
T 1ob3_A 82 LDQ-DLKKLLDV----CEGGLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIP 153 (288)
T ss_dssp CSE-EHHHHHHT----STTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-
T ss_pred cCC-CHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEeECccccccCcc
Confidence 975 88888743 23568999999999999999999997 89999999999999999999999999999865432
Q ss_pred CCceeeeecccccccCceecccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCc-cccc----
Q 002238 753 KGSIETRIAGTFGYLAPEYAVTG-RVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSK-DSFH---- 826 (948)
Q Consensus 753 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~---- 826 (948)
.. ......||+.|+|||++.+. .++.++|||||||++|||++|+.||......+....+ ........ ..+.
T Consensus 154 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 230 (288)
T 1ob3_A 154 VR-KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRI--FRILGTPNSKNWPNVTE 230 (288)
T ss_dssp ---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH--HHHHCCCCTTTSTTGGG
T ss_pred cc-ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH--HHHHCCCChhhchhhhc
Confidence 21 23345689999999998764 5899999999999999999999999876543322211 11111000 0000
Q ss_pred -cccCcccC------CccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 827 -KAIDPTID------LNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 827 -~~~~~~~~------~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
...++... ..........++.+++.+|++.||++||+++|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 231 LPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp STTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00111110 01111123456889999999999999999999876
No 64
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.6e-39 Score=356.32 Aligned_cols=275 Identities=20% Similarity=0.250 Sum_probs=212.4
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC--ceEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGN--EKLL 668 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--~~~l 668 (948)
.++|++.+.||+|+||.||+|+.. +|+.||||++.... .....+.+.+|++++++++||||+++++++.... ..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNIS-FLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL 86 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGG-GGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEecccc-ccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEE
Confidence 467999999999999999999876 58999999987542 2334577889999999999999999999998765 6799
Q ss_pred EEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEE----cCCCCeEEeecC
Q 002238 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL----GDDMRAKVADFG 744 (948)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill----~~~~~~kl~DfG 744 (948)
||||+++|+|.+++.... ....+++.+++.++.|++.||+|||+ .+|+||||||+||++ +.++.+||+|||
T Consensus 87 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg 161 (319)
T 4euu_A 87 IMEFCPCGSLYTVLEEPS--NAYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161 (319)
T ss_dssp EEECCTTCBHHHHHHSGG--GTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEECTTSCEEEEECCCT
T ss_pred EEeCCCCCCHHHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEeccCCCCceEEEccCC
Confidence 999999999999986522 22348999999999999999999997 899999999999999 777889999999
Q ss_pred CceecCCCCCceeeeecccccccCceecc--------cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhh-hhHHHHH
Q 002238 745 LVRLAPEGKGSIETRIAGTFGYLAPEYAV--------TGRVTTKVDVFSFGVILMELITGRKALDESQPEES-MHLVTWF 815 (948)
Q Consensus 745 la~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~-~~~~~~~ 815 (948)
+++...... ......||+.|+|||++. +..++.++|||||||++|||++|+.||........ ......+
T Consensus 162 ~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 239 (319)
T 4euu_A 162 AARELEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKI 239 (319)
T ss_dssp TCEECCTTC--CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHH
T ss_pred CceecCCCC--ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHH
Confidence 998765543 233456999999999986 57889999999999999999999999975443221 1111111
Q ss_pred HHhhcCccccc---cccC------cccC-CccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhh
Q 002238 816 RRIHLSKDSFH---KAID------PTID-LNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLV 875 (948)
Q Consensus 816 ~~~~~~~~~~~---~~~~------~~~~-~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~ 875 (948)
... ....... .... +.+. ...........+.+++.+|++.||++||+++|+++...+..
T Consensus 240 ~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 240 ITG-KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp HHH-CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred hcC-CCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 111 1000000 0000 0111 01223455667889999999999999999999999887653
No 65
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1e-39 Score=355.49 Aligned_cols=276 Identities=19% Similarity=0.259 Sum_probs=217.9
Q ss_pred hhcCCcccceecccCceEEEEEEE-cCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEE-EeCCceEE
Q 002238 591 VTNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHC-LDGNEKLL 668 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~-~~~~~~~l 668 (948)
..++|++.+.||+|+||.||+|+. .+|+.||||++.... ...++.+|+.+++.++|++++..+.++ .+++..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l 82 (296)
T 3uzp_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT----KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVM 82 (296)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS----SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEE
T ss_pred eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc----chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEE
Confidence 457899999999999999999986 579999999987542 224689999999999998877666655 56677899
Q ss_pred EEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEE---cCCCCeEEeecCC
Q 002238 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGL 745 (948)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill---~~~~~~kl~DfGl 745 (948)
||||+ +++|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+||++ +.++.+||+|||+
T Consensus 83 v~e~~-~~~L~~~~~~----~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~ 154 (296)
T 3uzp_A 83 VMELL-GPSLEDLFNF----CSRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGL 154 (296)
T ss_dssp EEECC-CCBHHHHHHH----TTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEEECCCTT
T ss_pred EEEec-CCCHHHHHHh----hccCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHeEEecCCCCCeEEEeeCCC
Confidence 99999 9999999853 23579999999999999999999997 899999999999999 4888999999999
Q ss_pred ceecCCCCCc------eeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhh
Q 002238 746 VRLAPEGKGS------IETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIH 819 (948)
Q Consensus 746 a~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 819 (948)
++........ ......||+.|+|||++.+..++.++||||||+++|||++|+.||..............+....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 234 (296)
T 3uzp_A 155 AKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKK 234 (296)
T ss_dssp CEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccc
Confidence 9866554321 1244679999999999999999999999999999999999999998754332222222111111
Q ss_pred cCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhhhCCCCCCCcccc
Q 002238 820 LSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELWKPTDQNSEDIY 889 (948)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~~~~~~~~~~~~~ 889 (948)
.... . .......+..+.+++.+|++.||++||++.++++.|+++............||.
T Consensus 235 ~~~~--~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~~~~~~dw~ 293 (296)
T 3uzp_A 235 MSTP--I---------EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWN 293 (296)
T ss_dssp HHSC--H---------HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTCCSSCCCGGG
T ss_pred cCCc--h---------HHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCCccccccccc
Confidence 0000 0 000111234688999999999999999999999999999988877666666664
No 66
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.2e-40 Score=376.68 Aligned_cols=262 Identities=22% Similarity=0.274 Sum_probs=211.1
Q ss_pred HHHHHHhhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEe
Q 002238 585 IQVLRNVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLD 662 (948)
Q Consensus 585 ~~~l~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 662 (948)
++.++...++|++.+.||+|+||.||+|+.+ +++.||||++.+... .....+.+.+|+.+++.++||||+++++++.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 4455556789999999999999999999876 689999999875321 12223458899999999999999999999999
Q ss_pred CCceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEee
Q 002238 663 GNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVAD 742 (948)
Q Consensus 663 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~D 742 (948)
++..++||||+++|+|.+++.. ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~------~~~~e~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~D 211 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSN------YDVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLAD 211 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECC
T ss_pred CCEEEEEEeCCCCCcHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeeECCCCCEEEec
Confidence 9999999999999999998843 358899999999999999999997 8999999999999999999999999
Q ss_pred cCCceecCCCCCceeeeecccccccCceecccCC----CCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHh
Q 002238 743 FGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGR----VTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRI 818 (948)
Q Consensus 743 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 818 (948)
||+++.............+||+.|+|||++.+.. ++.++|||||||++|||++|+.||......+....+...
T Consensus 212 FG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~--- 288 (410)
T 3v8s_A 212 FGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNH--- 288 (410)
T ss_dssp CTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTH---
T ss_pred cceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhc---
Confidence 9999876554433344578999999999998765 889999999999999999999999876544332222100
Q ss_pred hcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCC--CCChHHHHHH
Q 002238 819 HLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQ--RPDMGHAVNV 870 (948)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~--RPt~~ev~~~ 870 (948)
...+. + +. ......++.+++.+|++.+|.+ ||+++||+++
T Consensus 289 ---~~~~~--~-p~------~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 289 ---KNSLT--F-PD------DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp ---HHHCC--C-CT------TCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred ---ccccc--C-CC------cccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 00000 0 00 0011245889999999999998 9999999874
No 67
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.3e-40 Score=371.36 Aligned_cols=264 Identities=25% Similarity=0.375 Sum_probs=212.6
Q ss_pred hcCCcccceecccCceEEEEEEEc------CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCc
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNE 665 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 665 (948)
.++|++.+.||+|+||.||+|++. +++.||||+++.. .......++.+|+.++++++||||+++++++.++..
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~ 148 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV-CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 148 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccc-cChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence 467899999999999999999853 4678999998653 345556789999999999999999999999999999
Q ss_pred eEEEEEecCCCChhHHHHhhhh--cCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCC---CeEE
Q 002238 666 KLLVFEYMPQGTLSRHIFNWAE--EGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM---RAKV 740 (948)
Q Consensus 666 ~~lv~e~~~~gsL~~~l~~~~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~---~~kl 740 (948)
.++||||+++|+|.+++..... .....+++.+++.++.||+.||+|||+ .+|+||||||+|||++.++ .+||
T Consensus 149 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~~~kL 225 (367)
T 3l9p_A 149 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKI 225 (367)
T ss_dssp CEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred CEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEEecCCCCceEEE
Confidence 9999999999999999965322 122468999999999999999999997 8999999999999999555 5999
Q ss_pred eecCCceecCCC-CCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHh
Q 002238 741 ADFGLVRLAPEG-KGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDESQPEESMHLVTWFRRI 818 (948)
Q Consensus 741 ~DfGla~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 818 (948)
+|||+++..... .........||+.|+|||++.+..++.++|||||||++|||++ |..||......+....+ .
T Consensus 226 ~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i---~-- 300 (367)
T 3l9p_A 226 GDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV---T-- 300 (367)
T ss_dssp CCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH---H--
T ss_pred CCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH---H--
Confidence 999999743221 1122334568999999999999999999999999999999998 99999876544322111 1
Q ss_pred hcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhh
Q 002238 819 HLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVEL 877 (948)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~ 877 (948)
. ... ... ....+..+.+++.+||+.+|++||++.+|++.|+.+.+.
T Consensus 301 -~-~~~------~~~-----~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~ 346 (367)
T 3l9p_A 301 -S-GGR------MDP-----PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 346 (367)
T ss_dssp -T-TCC------CCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -c-CCC------CCC-----CccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence 1 000 000 111234588999999999999999999999999998764
No 68
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=4e-40 Score=383.90 Aligned_cols=257 Identities=27% Similarity=0.449 Sum_probs=213.5
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 670 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 670 (948)
.++|++.+.||+|+||.||+|.++ ++..||||+++.. ....++|.+|++++++++||||++++++|.+.+..++||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 295 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 295 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSS---SSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCc---ccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEE
Confidence 456888999999999999999986 4889999998754 234678999999999999999999999999999999999
Q ss_pred EecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceecC
Q 002238 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 750 (948)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~~ 750 (948)
||+++|+|.+++.. .....+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++...
T Consensus 296 E~~~~g~L~~~l~~---~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 369 (495)
T 1opk_A 296 EFMTYGNLLDYLRE---CNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMT 369 (495)
T ss_dssp ECCTTCBHHHHHHH---SCTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCEEECCTTCEECCT
T ss_pred EccCCCCHHHHHHh---cCcCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChhhEEECCCCcEEEeecccceecc
Confidence 99999999999854 233568999999999999999999997 899999999999999999999999999999765
Q ss_pred CCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHhhcCcccccccc
Q 002238 751 EGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDESQPEESMHLVTWFRRIHLSKDSFHKAI 829 (948)
Q Consensus 751 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 829 (948)
...........+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+....+ .. . ..
T Consensus 370 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~---~~----~--~~--- 437 (495)
T 1opk_A 370 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL---EK----D--YR--- 437 (495)
T ss_dssp TCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHH---HT----T--CC---
T ss_pred CCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHH---Hc----C--CC---
Confidence 433222333456789999999999999999999999999999999 99999876644322211 11 0 00
Q ss_pred CcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhh
Q 002238 830 DPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLV 875 (948)
Q Consensus 830 ~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~ 875 (948)
+. .....+..+.+++.+||+.||++||++.+|++.|+.+.
T Consensus 438 ---~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 438 ---ME---RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp ---CC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred ---CC---CCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 00 01122346889999999999999999999999998875
No 69
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=5.2e-40 Score=352.06 Aligned_cols=257 Identities=29% Similarity=0.475 Sum_probs=212.4
Q ss_pred hcCCcccceecccCceEEEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFE 671 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 671 (948)
.++|+..+.||+|+||.||+|...+++.||||++.... ...+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA---MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTE 83 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT---BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEC
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC---CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEe
Confidence 35788999999999999999999888999999997643 234679999999999999999999999999999999999
Q ss_pred ecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceecCC
Q 002238 672 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE 751 (948)
Q Consensus 672 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~~~ 751 (948)
|+++++|.+++.. ....+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||+++....
T Consensus 84 ~~~~~~L~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 156 (267)
T 3t9t_A 84 FMEHGCLSDYLRT----QRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 156 (267)
T ss_dssp CCTTCBHHHHHHH----TTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred CCCCCcHHHHHhh----CcccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEECCCCCEEEccccccccccc
Confidence 9999999999853 23568999999999999999999997 8999999999999999999999999999986543
Q ss_pred CCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHhhcCccccccccC
Q 002238 752 GKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDESQPEESMHLVTWFRRIHLSKDSFHKAID 830 (948)
Q Consensus 752 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 830 (948)
..........||+.|+|||++.+..++.++||||||+++|||++ |+.||......+.... +... ... ..
T Consensus 157 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~------i~~~---~~~-~~ 226 (267)
T 3t9t_A 157 DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED------ISTG---FRL-YK 226 (267)
T ss_dssp HHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHH------HHTT---CCC-CC
T ss_pred ccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHH------HhcC---CcC-CC
Confidence 22222233457889999999999999999999999999999999 8999987654332111 1110 000 00
Q ss_pred cccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhh
Q 002238 831 PTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVE 876 (948)
Q Consensus 831 ~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~ 876 (948)
+ ......+.+++.+|++.+|++||++.++++.|+++.+
T Consensus 227 ~--------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 227 P--------RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp C--------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred C--------ccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 1 1123458899999999999999999999999999865
No 70
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.1e-39 Score=358.64 Aligned_cols=264 Identities=28% Similarity=0.411 Sum_probs=215.5
Q ss_pred hcCCcccceecccCceEEEEEEE------cCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCc
Q 002238 592 TNNFSEENILGRGGFGTVYKGEL------HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNE 665 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 665 (948)
.++|.+.+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|++++++++||||+++++++.+++.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 100 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA-SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC-CHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence 56799999999999999999986 245889999987542 45556789999999999999999999999999999
Q ss_pred eEEEEEecCCCChhHHHHhhhhc-------------------CCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCC
Q 002238 666 KLLVFEYMPQGTLSRHIFNWAEE-------------------GLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLK 726 (948)
Q Consensus 666 ~~lv~e~~~~gsL~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik 726 (948)
.++||||+++|+|.+++...... ....+++.+++.++.|+++||+|||+ .+|+|||||
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dik 177 (314)
T 2ivs_A 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLA 177 (314)
T ss_dssp CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHH---TTEECCCCS
T ss_pred eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHH---CCCcccccc
Confidence 99999999999999999653221 12358999999999999999999997 899999999
Q ss_pred CccEEEcCCCCeEEeecCCceecCCCCCc-eeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q 002238 727 PSNILLGDDMRAKVADFGLVRLAPEGKGS-IETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDESQ 804 (948)
Q Consensus 727 ~~Nill~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~ 804 (948)
|+||+++.++.+||+|||+++........ ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||....
T Consensus 178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 257 (314)
T 2ivs_A 178 ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP 257 (314)
T ss_dssp GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 99999999999999999999866543322 1233457889999999999999999999999999999999 999998766
Q ss_pred chhhhhHHHHHHHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhh
Q 002238 805 PEESMHLVTWFRRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVEL 877 (948)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~ 877 (948)
.......+. .. . . ... .......+.+++.+|++.||++||++.++++.|+++...
T Consensus 258 ~~~~~~~~~---~~---~---~----~~~-----~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 258 PERLFNLLK---TG---H---R----MER-----PDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp GGGHHHHHH---TT---C---C----CCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHhh---cC---C---c----CCC-----CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 544322111 10 0 0 000 012234688999999999999999999999999998764
No 71
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=9.6e-40 Score=364.21 Aligned_cols=258 Identities=23% Similarity=0.323 Sum_probs=207.2
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcC---ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI---SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKL 667 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 667 (948)
.++|++.+.||+|+||.||+|..+ +|+.||||++..... .....+.+.+|+.+++.++||||+++++++.+++..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 467999999999999999999875 789999999864321 1224578999999999999999999999999999999
Q ss_pred EEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCC---eEEeecC
Q 002238 668 LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR---AKVADFG 744 (948)
Q Consensus 668 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~---~kl~DfG 744 (948)
+||||+++|+|.+.+..... ....+++..+..++.||+.||+|||+ .+|+||||||+|||++.++. +||+|||
T Consensus 103 lv~e~~~g~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg 178 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRAD-AGFVYSEAVASHYMRQILEALRYCHD---NNIIHRDVKPHCVLLASKENSAPVKLGGFG 178 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECSSSTTCCEEECCCT
T ss_pred EEEeCCCCCCHHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChHHeEEecCCCCCcEEEecCc
Confidence 99999999999888765332 23568999999999999999999997 89999999999999986654 9999999
Q ss_pred CceecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCccc
Q 002238 745 LVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDS 824 (948)
Q Consensus 745 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 824 (948)
+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ... .+......
T Consensus 179 ~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----~~~---~i~~~~~~ 250 (351)
T 3c0i_A 179 VAIQLGESG-LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER----LFE---GIIKGKYK 250 (351)
T ss_dssp TCEECCTTS-CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHH----HHH---HHHHTCCC
T ss_pred ceeEecCCC-eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHH----HHH---HHHcCCCC
Confidence 998765432 2234457999999999999999999999999999999999999999864211 111 11111100
Q ss_pred cccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 825 FHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
.. ..........+.+++.+|++.||++||++.+++++
T Consensus 251 ~~---------~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 251 MN---------PRQWSHISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp CC---------HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CC---------ccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 00 00111223468899999999999999999999874
No 72
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=7e-40 Score=361.62 Aligned_cols=265 Identities=28% Similarity=0.448 Sum_probs=198.9
Q ss_pred hhcCCcccceecccCceEEEEEEEcC-Cc---EEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCce
Q 002238 591 VTNNFSEENILGRGGFGTVYKGELHD-GT---KIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEK 666 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~~~-g~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 666 (948)
..++|++.+.||+|+||.||+|.+.. ++ .||||+++.........+.+.+|++++++++||||+++++++.+....
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 35689999999999999999998653 32 799999987655566678899999999999999999999999877655
Q ss_pred ------EEEEEecCCCChhHHHHhhhh-cCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeE
Q 002238 667 ------LLVFEYMPQGTLSRHIFNWAE-EGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAK 739 (948)
Q Consensus 667 ------~lv~e~~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~k 739 (948)
++||||+++|+|.+++..... .....+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+|
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~Dikp~NIli~~~~~~k 177 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSS---RNFIHRDLAARNCMLAEDMTVC 177 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEE
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHc---CCcccCCCCcceEEEcCCCCEE
Confidence 999999999999999865322 222368999999999999999999997 8999999999999999999999
Q ss_pred EeecCCceecCCCCC-ceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHH
Q 002238 740 VADFGLVRLAPEGKG-SIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDESQPEESMHLVTWFRR 817 (948)
Q Consensus 740 l~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~ 817 (948)
|+|||+++....... .......+|+.|+|||++.+..++.++||||||+++|||++ |+.||......+....+.
T Consensus 178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~---- 253 (323)
T 3qup_A 178 VADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLI---- 253 (323)
T ss_dssp ECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH----
T ss_pred EeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHh----
Confidence 999999986544322 12233457889999999999999999999999999999999 999998766543321111
Q ss_pred hhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhh
Q 002238 818 IHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVE 876 (948)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~ 876 (948)
. .... .. .......+.+++.+|++.||++||++.++++.|+++..
T Consensus 254 --~-~~~~--~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~ 298 (323)
T 3qup_A 254 --G-GNRL--KQ---------PPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILG 298 (323)
T ss_dssp --T-TCCC--CC---------CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --c-CCCC--CC---------CCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 0 0000 00 11223468899999999999999999999999999976
No 73
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=2.6e-40 Score=376.82 Aligned_cols=265 Identities=21% Similarity=0.286 Sum_probs=213.6
Q ss_pred eHHHHHHhhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEE
Q 002238 584 SIQVLRNVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVRHRHLVALLGHCL 661 (948)
Q Consensus 584 ~~~~l~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~ 661 (948)
.+.+++...++|++.++||+|+||+||+|+.+ +++.||||++.+... .......+.+|+.++..++||||+++++++.
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 34556666789999999999999999999976 578999999975321 1222344889999999999999999999999
Q ss_pred eCCceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEe
Q 002238 662 DGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVA 741 (948)
Q Consensus 662 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~ 741 (948)
+++..++||||+++|+|.+++.. ....+++..+..++.|++.||+|||+ .+||||||||+|||++.++.+||+
T Consensus 145 ~~~~~~lV~Ey~~gg~L~~~l~~----~~~~l~e~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILl~~~g~vkL~ 217 (437)
T 4aw2_A 145 DDNNLYLVMDYYVGGDLLTLLSK----FEDRLPEEMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLA 217 (437)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHT----TTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEEC
T ss_pred eCCEEEEEEecCCCCcHHHHHHH----ccCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeeEcCCCCEEEc
Confidence 99999999999999999999853 23578999999999999999999997 899999999999999999999999
Q ss_pred ecCCceecCCCCCceeeeecccccccCceecc-----cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHH-H
Q 002238 742 DFGLVRLAPEGKGSIETRIAGTFGYLAPEYAV-----TGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTW-F 815 (948)
Q Consensus 742 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~-~ 815 (948)
|||+++.............+||+.|+|||++. ...++.++|||||||++|||++|+.||......+....+.. .
T Consensus 218 DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~ 297 (437)
T 4aw2_A 218 DFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHK 297 (437)
T ss_dssp CCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHH
T ss_pred chhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhcc
Confidence 99999876555444445568999999999987 56789999999999999999999999987665443222210 0
Q ss_pred HHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCC--CCChHHHHHH
Q 002238 816 RRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQ--RPDMGHAVNV 870 (948)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~--RPt~~ev~~~ 870 (948)
.... +. .. ......++.+++.+|+..+|++ ||+++|++++
T Consensus 298 ~~~~-----~p----~~------~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 298 ERFQ-----FP----TQ------VTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp HHCC-----CC----SS------CCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred cccc-----CC----cc------cccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 0000 00 00 0112245889999999888888 9999999874
No 74
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1e-39 Score=350.50 Aligned_cols=255 Identities=23% Similarity=0.356 Sum_probs=209.2
Q ss_pred hcCCcccceecccCceEEEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC--CceEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG--NEKLLV 669 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lv 669 (948)
.++|++.+.||+|+||.||+|+++ ++.||||++..........+.+.+|+.++++++||||+++++++.+. ...++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 457899999999999999999986 89999999987655666678899999999999999999999999877 778999
Q ss_pred EEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCC--eeecCCCCccEEEcCCCCeEEeecCCce
Q 002238 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQS--FIHRDLKPSNILLGDDMRAKVADFGLVR 747 (948)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivHrDik~~Nill~~~~~~kl~DfGla~ 747 (948)
|||+++|+|.+++.. .....+++.+++.++.|++.||+|||+ .+ |+||||||+||+++.++.++|+|||++.
T Consensus 88 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~ 161 (271)
T 3kmu_A 88 THWMPYGSLYNVLHE---GTNFVVDQSQAVKFALDMARGMAFLHT---LEPLIPRHALNSRSVMIDEDMTARISMADVKF 161 (271)
T ss_dssp EECCTTCBHHHHHHS---CSSCCCCHHHHHHHHHHHHHHHHHHTT---SSSCCTTCCCSGGGEEECTTSCEEEEGGGSCC
T ss_pred ecccCCCcHHHHHhh---cccCCCCHHHHHHHHHHHHHHHHHHhc---CCCceecCCCccceEEEcCCcceeEEecccee
Confidence 999999999999953 222468999999999999999999997 67 9999999999999999999999998866
Q ss_pred ecCCCCCceeeeecccccccCceecccCCCCc---hhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCccc
Q 002238 748 LAPEGKGSIETRIAGTFGYLAPEYAVTGRVTT---KVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDS 824 (948)
Q Consensus 748 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 824 (948)
.... ....||+.|+|||++.+..++. ++||||||+++|||++|+.||......+..... ....
T Consensus 162 ~~~~------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~------~~~~-- 227 (271)
T 3kmu_A 162 SFQS------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKV------ALEG-- 227 (271)
T ss_dssp TTSC------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHH------HHSC--
T ss_pred eecc------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHH------HhcC--
Confidence 4322 2246899999999998765544 899999999999999999999876543321111 1000
Q ss_pred cccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhh
Q 002238 825 FHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVE 876 (948)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~ 876 (948)
..+.+. ......+.+++.+|++.||++||+++++++.|+++.+
T Consensus 228 ----~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 228 ----LRPTIP-----PGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp ----CCCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred ----CCCCCC-----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 011111 1123458899999999999999999999999998753
No 75
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=3.9e-40 Score=362.88 Aligned_cols=253 Identities=25% Similarity=0.375 Sum_probs=203.1
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 670 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 670 (948)
.++|++.+.||+|+||.||+|... +++.||||++.... .....+.+.+|+.+++.++||||+++++++.+++..++||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~ 84 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEccc-ccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 468999999999999999999876 78999999987542 2223467899999999999999999999999999999999
Q ss_pred EecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceecC
Q 002238 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 750 (948)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~~ 750 (948)
||+++|+|.+++. ....+++.+++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 85 e~~~~~~L~~~l~-----~~~~~~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 156 (323)
T 3tki_A 85 EYCSGGELFDRIE-----PDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFR 156 (323)
T ss_dssp ECCTTEEGGGGSB-----TTTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECE
T ss_pred EcCCCCcHHHHHh-----hcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccccchHHEEEeCCCCEEEEEeeccceec
Confidence 9999999998883 23568999999999999999999997 899999999999999999999999999998654
Q ss_pred CCC-CceeeeecccccccCceecccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCccccccc
Q 002238 751 EGK-GSIETRIAGTFGYLAPEYAVTGRV-TTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHKA 828 (948)
Q Consensus 751 ~~~-~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 828 (948)
... ........||+.|+|||++.+..+ +.++|||||||++|||++|+.||........ ....+... ...
T Consensus 157 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~~~~~~----~~~---- 227 (323)
T 3tki_A 157 YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-EYSDWKEK----KTY---- 227 (323)
T ss_dssp ETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSH-HHHHHHTT----CTT----
T ss_pred cCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHH-HHHHHhcc----ccc----
Confidence 322 122345679999999999988775 7899999999999999999999986554321 11111110 000
Q ss_pred cCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 829 IDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 829 ~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
. .........+.+++.+|++.||++||++.|+++
T Consensus 228 ~-------~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 228 L-------NPWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp S-------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred C-------CccccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 0 001122345789999999999999999999876
No 76
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=1.1e-39 Score=350.29 Aligned_cols=256 Identities=29% Similarity=0.477 Sum_probs=196.0
Q ss_pred hcCCcccceecccCceEEEEEEEcCCcEEEEEEeecCcCC--hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVIS--GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 669 (948)
.++|+..+.||+|+||.||+|.+. |+.||||+++..... ....+.+.+|+++++.++||||+++++++.+++..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 467899999999999999999976 899999998754322 23357899999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcC--------CCCeEEe
Q 002238 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD--------DMRAKVA 741 (948)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~--------~~~~kl~ 741 (948)
|||+++++|.+++. ...+++..++.++.|++.||+|||+....+|+||||||+||+++. ++.+||+
T Consensus 85 ~e~~~~~~L~~~~~------~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~ 158 (271)
T 3dtc_A 85 MEFARGGPLNRVLS------GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKIT 158 (271)
T ss_dssp EECCTTEEHHHHHT------SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEEC
T ss_pred EEcCCCCCHHHHhh------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEc
Confidence 99999999998873 257899999999999999999999822122999999999999986 6789999
Q ss_pred ecCCceecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcC
Q 002238 742 DFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLS 821 (948)
Q Consensus 742 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 821 (948)
|||+++...... .....||+.|+|||++.+..++.++||||||+++|||++|+.||............ ..
T Consensus 159 Dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~------~~- 228 (271)
T 3dtc_A 159 DFGLAREWHRTT---KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGV------AM- 228 (271)
T ss_dssp CCCC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHH------HT-
T ss_pred cCCccccccccc---ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhh------hc-
Confidence 999998654332 22456999999999999999999999999999999999999999876543321111 11
Q ss_pred ccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhh
Q 002238 822 KDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSL 874 (948)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~ 874 (948)
........ ...+..+.+++.+|++.+|.+||++.|+++.|+++
T Consensus 229 -~~~~~~~~---------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 229 -NKLALPIP---------STCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp -SCCCCCCC---------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred -CCCCCCCC---------cccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 00000011 12234688999999999999999999999999764
No 77
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.9e-39 Score=352.56 Aligned_cols=267 Identities=23% Similarity=0.326 Sum_probs=204.9
Q ss_pred cCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEEEE
Q 002238 593 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFE 671 (948)
Q Consensus 593 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 671 (948)
++|++.+.||+|+||+||+|..+ +|+.||||++............+.+|+.++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 57999999999999999999875 68999999998765555556789999999999999999999999999999999999
Q ss_pred ecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceecCC
Q 002238 672 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE 751 (948)
Q Consensus 672 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~~~ 751 (948)
|+++ ++.+.+.. ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 82 ~~~~-~l~~~~~~----~~~~l~~~~~~~~~~ql~~~l~~lH~---~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 153 (292)
T 3o0g_A 82 FCDQ-DLKKYFDS----CNGDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGI 153 (292)
T ss_dssp CCSE-EHHHHHHH----TTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCS
T ss_pred cCCC-CHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccceecCC
Confidence 9975 66555532 23579999999999999999999997 7999999999999999999999999999987643
Q ss_pred CCCceeeeecccccccCceecccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCcc-ccc---
Q 002238 752 GKGSIETRIAGTFGYLAPEYAVTGR-VTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKD-SFH--- 826 (948)
Q Consensus 752 ~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~--- 826 (948)
... ......||+.|+|||++.+.. ++.++|||||||++|||++|..||........ .............. .+.
T Consensus 154 ~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~ 231 (292)
T 3o0g_A 154 PVR-CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD-QLKRIFRLLGTPTEEQWPSMT 231 (292)
T ss_dssp CCS-CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHH-HHHHHHHHHCCCCTTTCTTGG
T ss_pred ccc-cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHH-HHHHHHHHhCCCChhhhhhhc
Confidence 322 234457899999999998766 79999999999999999998888654432221 11111111111000 000
Q ss_pred cccC--------cccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 827 KAID--------PTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 827 ~~~~--------~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
+..+ ...............+.+++.+|++.||++|||++|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 232 KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp GSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0000 000001111123456889999999999999999999976
No 78
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=6.4e-40 Score=362.24 Aligned_cols=258 Identities=27% Similarity=0.426 Sum_probs=202.2
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcE----EEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCce
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTK----IAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEK 666 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~----vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 666 (948)
.++|+..+.||+|+||.||+|++. +++. ||+|.+.... .....+++.+|+.++++++||||++++++|.++. .
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~ 91 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTST-V 91 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC--------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-E
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc-CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-e
Confidence 357899999999999999999864 4544 5788775432 3445678999999999999999999999998754 7
Q ss_pred EEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCc
Q 002238 667 LLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLV 746 (948)
Q Consensus 667 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla 746 (948)
++||||+++|+|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++
T Consensus 92 ~~v~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a 164 (327)
T 3poz_A 92 QLITQLMPFGCLLDYVRE----HKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLA 164 (327)
T ss_dssp EEEEECCTTCBHHHHHHH----STTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTHH
T ss_pred EEEEEecCCCcHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCChheEEECCCCCEEEccCcce
Confidence 899999999999998854 23579999999999999999999997 79999999999999999999999999999
Q ss_pred eecCCCCC-ceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHhhcCccc
Q 002238 747 RLAPEGKG-SIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDESQPEESMHLVTWFRRIHLSKDS 824 (948)
Q Consensus 747 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 824 (948)
+....... .......||+.|+|||++.+..++.++|||||||++|||++ |+.||......+....+. . ...
T Consensus 165 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~---~----~~~ 237 (327)
T 3poz_A 165 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE---K----GER 237 (327)
T ss_dssp HHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH---T----TCC
T ss_pred eEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHH---c----CCC
Confidence 86544332 22233457889999999999999999999999999999999 999998766544322211 1 000
Q ss_pred cccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhh
Q 002238 825 FHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVE 876 (948)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~ 876 (948)
. . ........+.+++.+||+.+|.+||++.++++.|+.+..
T Consensus 238 ~--~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 238 L--P---------QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp C--C---------CCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred C--C---------CCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 0 0 011123458899999999999999999999999998864
No 79
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=7.8e-40 Score=355.04 Aligned_cols=262 Identities=27% Similarity=0.498 Sum_probs=200.6
Q ss_pred hcCCcccceecccCceEEEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFE 671 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 671 (948)
.++|++.+.||+|+||.||+|++. ..||||+++.........+.+.+|++++++++||||+++++++ .....++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 467999999999999999999864 4699999987655666678899999999999999999999965 5567899999
Q ss_pred ecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceecCC
Q 002238 672 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE 751 (948)
Q Consensus 672 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~~~ 751 (948)
|+++++|.+++.. ....+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 100 ~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 172 (289)
T 3og7_A 100 WCEGSSLYHHLHA----SETKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSR 172 (289)
T ss_dssp CCCEEEHHHHHTT----C---CCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEEEECCCC-------
T ss_pred ecCCCcHHHHHhh----ccCCCCHHHHHHHHHHHHHHHHHHHh---CCcccccCccceEEECCCCCEEEccceecccccc
Confidence 9999999988843 33578999999999999999999997 8999999999999999999999999999985543
Q ss_pred CC-CceeeeecccccccCceecc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCcccccc
Q 002238 752 GK-GSIETRIAGTFGYLAPEYAV---TGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHK 827 (948)
Q Consensus 752 ~~-~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 827 (948)
.. ........||+.|+|||++. +..++.++||||||+++|||++|+.||......+. ..........
T Consensus 173 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~--~~~~~~~~~~------- 243 (289)
T 3og7_A 173 WSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ--IIEMVGRGSL------- 243 (289)
T ss_dssp -----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHH--HHHHHHHTSC-------
T ss_pred ccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHH--HHHHhccccc-------
Confidence 22 22234457999999999986 56789999999999999999999999987654332 1111111110
Q ss_pred ccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhh
Q 002238 828 AIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVE 876 (948)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~ 876 (948)
.+.+ .......+..+.+++.+|++.+|.+||++.++++.|+++.+
T Consensus 244 --~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 244 --SPDL--SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp --CCCT--TSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred --Ccch--hhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 0100 01111233568999999999999999999999999998753
No 80
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=3.1e-39 Score=363.31 Aligned_cols=254 Identities=22% Similarity=0.325 Sum_probs=208.2
Q ss_pred hhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEE
Q 002238 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 669 (948)
..++|++.+.||+|+||.||+|..+ +|+.||+|++... .......+.+|+++++.++||||+++++++.++...++|
T Consensus 49 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 126 (387)
T 1kob_A 49 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTP--YPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLI 126 (387)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--SHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEE
T ss_pred cccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEeccc--chhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEE
Confidence 3568999999999999999999875 6899999998764 344456899999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcC--CCCeEEeecCCce
Q 002238 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD--DMRAKVADFGLVR 747 (948)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~--~~~~kl~DfGla~ 747 (948)
|||+++|+|.+++.. ....+++.+++.++.||+.||+|||+ .+|+||||||+|||++. ++.+||+|||+++
T Consensus 127 ~E~~~gg~L~~~l~~----~~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~vkL~DFG~a~ 199 (387)
T 1kob_A 127 LEFLSGGELFDRIAA----EDYKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLAT 199 (387)
T ss_dssp EECCCCCBHHHHTTC----TTCCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCCTTCE
T ss_pred EEcCCCCcHHHHHHh----hcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccchHHeEEecCCCCceEEEecccce
Confidence 999999999988842 23478999999999999999999997 89999999999999974 4679999999999
Q ss_pred ecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCcccccc
Q 002238 748 LAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHK 827 (948)
Q Consensus 748 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 827 (948)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+....+ .. ....+
T Consensus 200 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i---~~---~~~~~-- 269 (387)
T 1kob_A 200 KLNPDE--IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNV---KR---CDWEF-- 269 (387)
T ss_dssp ECCTTS--CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHH---HH---CCCCC--
T ss_pred ecCCCc--ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHH---Hh---CCCCC--
Confidence 765432 234457999999999999999999999999999999999999999876543322111 11 11001
Q ss_pred ccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 828 AIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
++. .......++.+++.+|++.||.+||++.++++.
T Consensus 270 --~~~-----~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 270 --DED-----AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp --CSS-----TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred --Ccc-----ccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 110 011223468899999999999999999999863
No 81
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.3e-39 Score=353.17 Aligned_cols=260 Identities=27% Similarity=0.425 Sum_probs=217.7
Q ss_pred hhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEE
Q 002238 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 669 (948)
..++|++.+.||+|+||.||+|.++ +++.||||++... ....+.+.+|++++++++||||+++++++.+++..++|
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v 87 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC---STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC---HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEE
Confidence 3567899999999999999999876 5889999998753 34567899999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceec
Q 002238 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (948)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~ 749 (948)
|||+++++|.+++.. .....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.++|+|||+++..
T Consensus 88 ~e~~~~~~L~~~~~~---~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~ 161 (288)
T 3kfa_A 88 TEFMTYGNLLDYLRE---CNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLM 161 (288)
T ss_dssp EECCTTEEHHHHHHH---CCTTTSCHHHHHHHHHHHHHHHHHHHH---HTCCCSCCSGGGEEECGGGCEEECCCCGGGTS
T ss_pred EEcCCCCcHHHHHHh---cccCCccHhHHHHHHHHHHHHHHHHHH---CCccCCCCCcceEEEcCCCCEEEccCccceec
Confidence 999999999999854 233568999999999999999999997 79999999999999999999999999999876
Q ss_pred CCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHhhcCccccccc
Q 002238 750 PEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDESQPEESMHLVTWFRRIHLSKDSFHKA 828 (948)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 828 (948)
............+|+.|+|||++.+..++.++||||||+++|||++ |..||...........+. .. .
T Consensus 162 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~---~~------~--- 229 (288)
T 3kfa_A 162 TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE---KD------Y--- 229 (288)
T ss_dssp CSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHH---TT------C---
T ss_pred cCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh---cc------C---
Confidence 6554444455668899999999999999999999999999999999 999998766543322111 10 0
Q ss_pred cCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhh
Q 002238 829 IDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVEL 877 (948)
Q Consensus 829 ~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~ 877 (948)
.... ....+..+.+++.+|++.||.+||++.++++.|+.+...
T Consensus 230 -~~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 230 -RMER-----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp -CCCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -CCCC-----CCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 0000 011234688999999999999999999999999998754
No 82
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=2.7e-39 Score=372.77 Aligned_cols=252 Identities=29% Similarity=0.467 Sum_probs=208.3
Q ss_pred hcCCcccceecccCceEEEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC-ceEEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGN-EKLLVF 670 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~~lv~ 670 (948)
.++|++.+.||+|+||.||+|.++ |+.||||+++... ..+.|.+|++++++++||||+++++++.+.+ ..++||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~ 266 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 266 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT----TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch----HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEE
Confidence 467888999999999999999986 8899999997542 4578999999999999999999999987765 789999
Q ss_pred EecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceecC
Q 002238 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 750 (948)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~~ 750 (948)
||+++|+|.+++.. .+...+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++...
T Consensus 267 e~~~~g~L~~~l~~---~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 340 (450)
T 1k9a_A 267 EYMAKGSLVDYLRS---RGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 340 (450)
T ss_dssp ECCTTCBHHHHHHH---HCTTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EecCCCcHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEECCCCCEEEeeCCCccccc
Confidence 99999999999964 233457999999999999999999997 899999999999999999999999999998543
Q ss_pred CCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHhhcCcccccccc
Q 002238 751 EGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDESQPEESMHLVTWFRRIHLSKDSFHKAI 829 (948)
Q Consensus 751 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 829 (948)
... ....+|+.|+|||++.+..++.++||||||+++|||++ |+.||......+....+. . + ..
T Consensus 341 ~~~----~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~------~--~-~~--- 404 (450)
T 1k9a_A 341 STQ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE------K--G-YK--- 404 (450)
T ss_dssp ----------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHH------T--T-CC---
T ss_pred ccc----cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH------c--C-CC---
Confidence 321 22357899999999999999999999999999999998 999998765443322111 0 0 00
Q ss_pred CcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhh
Q 002238 830 DPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVE 876 (948)
Q Consensus 830 ~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~ 876 (948)
... ....+..+.+++.+||+.||++||++.++++.|+.+..
T Consensus 405 -~~~-----p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~ 445 (450)
T 1k9a_A 405 -MDA-----PDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRT 445 (450)
T ss_dssp -CCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -CCC-----CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 000 11233568899999999999999999999999999865
No 83
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=4.1e-40 Score=366.25 Aligned_cols=250 Identities=23% Similarity=0.352 Sum_probs=201.7
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcC-ChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCceEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKLL 668 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~l 668 (948)
.++|++.+.||+|+||.||+|+.+ +|+.||||++++... .......+.+|.++++.+ +||||+++++++.+.+..++
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 478999999999999999999875 689999999976422 233456788999999998 79999999999999999999
Q ss_pred EEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCcee
Q 002238 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 748 (948)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~ 748 (948)
||||+++|+|.+++... ..+++.++..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 102 v~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NILl~~~g~ikL~DFG~a~~ 173 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKS-----RRFDEARARFYAAEIISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKE 173 (353)
T ss_dssp EEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCCHHHEEECCCCCEEEccccceee
Confidence 99999999999988541 468999999999999999999997 8999999999999999999999999999985
Q ss_pred cCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCccccccc
Q 002238 749 APEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHKA 828 (948)
Q Consensus 749 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 828 (948)
..... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||......+....+ ......+.
T Consensus 174 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i------~~~~~~~p-- 244 (353)
T 3txo_A 174 GICNG-VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAI------LNDEVVYP-- 244 (353)
T ss_dssp SCC----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH------HHCCCCCC--
T ss_pred cccCC-ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHH------HcCCCCCC--
Confidence 43322 2344567999999999999999999999999999999999999999876654332211 11111111
Q ss_pred cCcccCCccchHHHHHHHHHHHHHhcccCCCCCCCh------HHHHH
Q 002238 829 IDPTIDLNEGILASISTVAELAGHCCAREPYQRPDM------GHAVN 869 (948)
Q Consensus 829 ~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~------~ev~~ 869 (948)
. .....+.+++.+|++.||.+||++ .++++
T Consensus 245 --~---------~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 245 --T---------WLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp --T---------TSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred --C---------CCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 1 122358899999999999999998 56654
No 84
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=9.5e-40 Score=357.44 Aligned_cols=259 Identities=32% Similarity=0.549 Sum_probs=202.2
Q ss_pred cCCcccceecccCceEEEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEEEEe
Q 002238 593 NNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEY 672 (948)
Q Consensus 593 ~~~~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 672 (948)
++|++.+.||+|+||.||+|++. ++.||||++.. ....+.+.+|++++++++||||+++++++. +..++||||
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~----~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~ 80 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIES----ESERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEY 80 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSS----TTHHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEEC
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecC----hhHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEc
Confidence 57888999999999999999986 88999999864 234578999999999999999999999876 457999999
Q ss_pred cCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCC-eEEeecCCceecCC
Q 002238 673 MPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR-AKVADFGLVRLAPE 751 (948)
Q Consensus 673 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~-~kl~DfGla~~~~~ 751 (948)
+++|+|.+++... .....+++..++.++.|+++||+|||+...++|+||||||+||+++.++. +||+|||+++....
T Consensus 81 ~~~~~L~~~l~~~--~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~ 158 (307)
T 2eva_A 81 AEGGSLYNVLHGA--EPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT 158 (307)
T ss_dssp CTTCBHHHHHHCS--SSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------
T ss_pred CCCCCHHHHHhcc--CCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccc
Confidence 9999999998541 11235789999999999999999999744368999999999999998886 79999999875433
Q ss_pred CCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCccccccccCc
Q 002238 752 GKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHKAIDP 831 (948)
Q Consensus 752 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 831 (948)
. .....||+.|+|||++.+..++.++||||||+++|||++|+.||......... ..+. ... .. .+
T Consensus 159 ~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~--~~~~--~~~--~~-----~~ 223 (307)
T 2eva_A 159 H----MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR--IMWA--VHN--GT-----RP 223 (307)
T ss_dssp ----------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHH--HHHH--HHT--TC-----CC
T ss_pred c----cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHH--HHHH--Hhc--CC-----CC
Confidence 2 22346999999999999999999999999999999999999999865432211 1111 111 00 00
Q ss_pred ccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhhhCC
Q 002238 832 TIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELWKP 880 (948)
Q Consensus 832 ~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~~~~ 880 (948)
.. ....+..+.+++.+|++.||++||+++++++.|+.+.+.+..
T Consensus 224 ~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 267 (307)
T 2eva_A 224 PL-----IKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPG 267 (307)
T ss_dssp CC-----BTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCC
T ss_pred Cc-----ccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccC
Confidence 00 011234588999999999999999999999999998765543
No 85
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.7e-39 Score=374.68 Aligned_cols=277 Identities=18% Similarity=0.233 Sum_probs=220.1
Q ss_pred hhcCCcccceecccCceEEEEEEE-cCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCC-CceeeEEeEEEeCCceEE
Q 002238 591 VTNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRH-RHLVALLGHCLDGNEKLL 668 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H-~niv~l~~~~~~~~~~~l 668 (948)
+.++|++.++||+|+||.||+|+. .+++.||||++..... ..++.+|+++++.++| +++..+..++.+.+..++
T Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~l 80 (483)
T 3sv0_A 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVL 80 (483)
T ss_dssp ETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS----SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEE
T ss_pred cCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc----cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEE
Confidence 357899999999999999999986 4789999998875422 2357899999999977 556666667778888899
Q ss_pred EEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEE---cCCCCeEEeecCC
Q 002238 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGL 745 (948)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill---~~~~~~kl~DfGl 745 (948)
||||+ +++|.+++.. ....+++.+++.|+.||+.||+|||+ .+||||||||+|||+ +.++.+||+|||+
T Consensus 81 vme~~-g~sL~~ll~~----~~~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDIKP~NILl~~~~~~~~vkL~DFGl 152 (483)
T 3sv0_A 81 VMDLL-GPSLEDLFNF----CSRKLSLKTVLMLADQMINRVEFVHS---KSFLHRDIKPDNFLMGLGRRANQVYIIDFGL 152 (483)
T ss_dssp EEECC-CCBHHHHHHH----TTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTTCEEECCCTT
T ss_pred EEECC-CCCHHHHHHh----hcCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCcceEEEecCCCCCeEEEEeCCc
Confidence 99999 9999999853 23579999999999999999999997 899999999999999 5888999999999
Q ss_pred ceecCCCCCc------eeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhh
Q 002238 746 VRLAPEGKGS------IETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIH 819 (948)
Q Consensus 746 a~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 819 (948)
++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||..............+....
T Consensus 153 a~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~ 232 (483)
T 3sv0_A 153 AKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK 232 (483)
T ss_dssp CEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHH
T ss_pred ceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhcc
Confidence 9976554321 1235679999999999999999999999999999999999999998866543333332222211
Q ss_pred cCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhhhCCCCCCCccccc
Q 002238 820 LSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELWKPTDQNSEDIYG 890 (948)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~~~~~~~~~~~~~~ 890 (948)
... .. .......+.++.+++.+|++.+|++||++.+|++.|+++............||..
T Consensus 233 ~~~-~~----------~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~~~~~~~~~dW~~ 292 (483)
T 3sv0_A 233 VAT-SI----------EALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREGFQFDYVFDWTI 292 (483)
T ss_dssp HHS-CH----------HHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCCSSCCHHHH
T ss_pred ccc-cH----------HHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHcCCCccCCcCchh
Confidence 100 00 0011122356899999999999999999999999999998877666666666653
No 86
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=2e-39 Score=351.55 Aligned_cols=255 Identities=32% Similarity=0.577 Sum_probs=203.6
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhh-----HHHHHHHHHHHHhcCCCceeeEEeEEEeCCc
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKG-----LTEFKSEIAVLTKVRHRHLVALLGHCLDGNE 665 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~-----~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 665 (948)
.++|++.+.||+|+||.||+|++. +++.||||++......... .+.+.+|++++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 467999999999999999999874 7899999998754322221 267899999999999999999999986554
Q ss_pred eEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCC--eeecCCCCccEEEcCCCC-----e
Q 002238 666 KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQS--FIHRDLKPSNILLGDDMR-----A 738 (948)
Q Consensus 666 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivHrDik~~Nill~~~~~-----~ 738 (948)
++||||+++|+|.+++.. ....+++..++.++.|++.||+|||+ .+ |+||||||+||+++.++. +
T Consensus 97 -~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~~l~~~l~~lH~---~~~~ivH~dikp~Nil~~~~~~~~~~~~ 168 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLD----KAHPIKWSVKLRLMLDIALGIEYMQN---QNPPIVHRDLRSPNIFLQSLDENAPVCA 168 (287)
T ss_dssp -EEEEECCTTCBHHHHHHC----TTSCCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCSCCSGGGEEESCCCTTCSCCE
T ss_pred -eEEEEecCCCCHHHHHhc----ccCCccHHHHHHHHHHHHHHHHHHHh---CCCCeecCCCCcceEEEeccCCCCceeE
Confidence 799999999999888743 33579999999999999999999997 67 999999999999988776 9
Q ss_pred EEeecCCceecCCCCCceeeeecccccccCceec--ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHH
Q 002238 739 KVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYA--VTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFR 816 (948)
Q Consensus 739 kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~--~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~ 816 (948)
||+|||+++.... ......||+.|+|||++ ....++.++||||||+++|||++|+.||.......... .....
T Consensus 169 kl~Dfg~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~-~~~~~ 243 (287)
T 4f0f_A 169 KVADFGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF-INMIR 243 (287)
T ss_dssp EECCCTTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHH-HHHHH
T ss_pred EeCCCCccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHH-HHHHh
Confidence 9999999985433 23446799999999998 44567899999999999999999999998765433211 11111
Q ss_pred HhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhh
Q 002238 817 RIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSL 874 (948)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~ 874 (948)
.. ... +.+. ...+..+.+++.+|++.||.+||++.++++.|+++
T Consensus 244 ~~-----~~~----~~~~-----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 244 EE-----GLR----PTIP-----EDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp HS-----CCC----CCCC-----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred cc-----CCC----CCCC-----cccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 10 011 1111 12234688999999999999999999999999764
No 87
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=365.26 Aligned_cols=252 Identities=24% Similarity=0.361 Sum_probs=205.3
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 669 (948)
.++|++.+.||+|+||.||+|..+ +++.||||++..... .......+.+|+++++.++|||||++++++.+.+..++|
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 367999999999999999999875 688999999875421 233457889999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceec
Q 002238 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (948)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~ 749 (948)
|||+.+|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 94 ~e~~~gg~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~ 165 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQ-----NVHFKEETVKLFICELVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAML 165 (384)
T ss_dssp ECCCTTEEHHHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EecCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEECCCCCEEEeccceeeec
Confidence 999999999998843 3568999999999999999999997 89999999999999999999999999999876
Q ss_pred CCCCCceeeeecccccccCceeccc---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCccccc
Q 002238 750 PEGKGSIETRIAGTFGYLAPEYAVT---GRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFH 826 (948)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 826 (948)
.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..............+... ...+
T Consensus 166 ~~~~--~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~---~~~~- 239 (384)
T 4fr4_A 166 PRET--QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETT---VVTY- 239 (384)
T ss_dssp CTTC--CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHC---CCCC-
T ss_pred cCCC--ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhc---ccCC-
Confidence 5432 3445679999999999864 45899999999999999999999999865443332222221111 1000
Q ss_pred cccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCC-hHHHHH
Q 002238 827 KAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPD-MGHAVN 869 (948)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt-~~ev~~ 869 (948)
. ......+.+++.+|++.||.+||+ ++++.+
T Consensus 240 ---p---------~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 240 ---P---------SAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp ---C---------TTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred ---C---------CcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 0 112245889999999999999998 565544
No 88
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=2.3e-39 Score=349.55 Aligned_cols=259 Identities=27% Similarity=0.442 Sum_probs=212.3
Q ss_pred hcCCcccceecccCceEEEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFE 671 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 671 (948)
.++|++.+.||+|+||.||+|..++++.||||++.... ...+.+.+|++++++++||||+++++++. .+..++|||
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e 87 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS---MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITE 87 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc---ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEe
Confidence 46789999999999999999998888899999987542 33578999999999999999999999886 456899999
Q ss_pred ecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceecCC
Q 002238 672 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE 751 (948)
Q Consensus 672 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~~~ 751 (948)
|+++++|.+++.... ...+++.+++.++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++....
T Consensus 88 ~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 161 (279)
T 1qpc_A 88 YMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIED 161 (279)
T ss_dssp CCTTCBHHHHTTSHH---HHTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred cCCCCCHHHHHhcCC---CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHhhEEEcCCCCEEECCCcccccccC
Confidence 999999999985421 1368999999999999999999997 8999999999999999999999999999987655
Q ss_pred CCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHhhcCccccccccC
Q 002238 752 GKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDESQPEESMHLVTWFRRIHLSKDSFHKAID 830 (948)
Q Consensus 752 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 830 (948)
..........+|+.|+|||++.+..++.++||||||+++|||++ |+.||......+.... .... ......
T Consensus 162 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~------~~~~---~~~~~~ 232 (279)
T 1qpc_A 162 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN------LERG---YRMVRP 232 (279)
T ss_dssp SCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHH------HHTT---CCCCCC
T ss_pred cccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHH------Hhcc---cCCCCc
Confidence 43323334457889999999998999999999999999999999 9999987654332111 1110 000000
Q ss_pred cccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhhh
Q 002238 831 PTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELW 878 (948)
Q Consensus 831 ~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~~ 878 (948)
...+..+.+++.+|++.+|++||++.++++.|+++....
T Consensus 233 ---------~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 271 (279)
T 1qpc_A 233 ---------DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 271 (279)
T ss_dssp ---------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred ---------ccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhc
Confidence 112346889999999999999999999999999987644
No 89
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.3e-39 Score=356.80 Aligned_cols=275 Identities=23% Similarity=0.363 Sum_probs=208.8
Q ss_pred HHHHHHhhcCCcccceecccCceEEEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhc--CCCceeeEEeEEEe
Q 002238 585 IQVLRNVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV--RHRHLVALLGHCLD 662 (948)
Q Consensus 585 ~~~l~~~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l--~H~niv~l~~~~~~ 662 (948)
......+.++|++.+.||+|+||.||+|+.. ++.||||++... ....+.+|.+++... +||||+++++++.+
T Consensus 29 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~ 102 (337)
T 3mdy_A 29 LLVQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT-----EEASWFRETEIYQTVLMRHENILGFIAADIK 102 (337)
T ss_dssp HHHHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG-----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEE
T ss_pred cccccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc-----ccchhhhHHHHHHHHhhcCCCeeeEEEEEcc
Confidence 3444556789999999999999999999986 899999998643 234455666666655 99999999999988
Q ss_pred C----CceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcc-----CCCeeecCCCCccEEEc
Q 002238 663 G----NEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLA-----HQSFIHRDLKPSNILLG 733 (948)
Q Consensus 663 ~----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-----~~~ivHrDik~~Nill~ 733 (948)
. ...++||||+++|+|.+++.. ..+++..++.++.|++.||+|||+.+ +.+|+||||||+|||++
T Consensus 103 ~~~~~~~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~ 176 (337)
T 3mdy_A 103 GTGSWTQLYLITDYHENGSLYDYLKS------TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVK 176 (337)
T ss_dssp SCGGGCEEEEEECCCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEEC
T ss_pred CCCCCCceEEEEeccCCCcHHHHhhc------cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEEC
Confidence 7 678999999999999999853 46899999999999999999999721 12999999999999999
Q ss_pred CCCCeEEeecCCceecCCCCCce---eeeecccccccCceecccCCCCch------hhHHHHHHHHHHHHhC--------
Q 002238 734 DDMRAKVADFGLVRLAPEGKGSI---ETRIAGTFGYLAPEYAVTGRVTTK------VDVFSFGVILMELITG-------- 796 (948)
Q Consensus 734 ~~~~~kl~DfGla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~------~Dv~s~Gv~l~elltg-------- 796 (948)
.++.+||+|||+++......... .....||+.|+|||++.+...+.+ +|||||||++|||++|
T Consensus 177 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~ 256 (337)
T 3mdy_A 177 KNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVE 256 (337)
T ss_dssp TTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCC
T ss_pred CCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccc
Confidence 99999999999998654433221 124579999999999987766654 9999999999999999
Q ss_pred --CCCCCCCCchhhhhHHHHHHHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhh
Q 002238 797 --RKALDESQPEESMHLVTWFRRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSL 874 (948)
Q Consensus 797 --~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~ 874 (948)
+.||....+..... .. ...... .....+.++..........++.+++.+||+.||++||++.++++.|+.+
T Consensus 257 ~~~~p~~~~~~~~~~~-~~-~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l 329 (337)
T 3mdy_A 257 EYQLPYHDLVPSDPSY-ED-MREIVC-----IKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKM 329 (337)
T ss_dssp CCCCTTTTTSCSSCCH-HH-HHHHHT-----TSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred cccccHhhhcCCCCch-hh-hHHHHh-----hhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHH
Confidence 66665543322111 00 111110 1111222222222335667799999999999999999999999999998
Q ss_pred hhhh
Q 002238 875 VELW 878 (948)
Q Consensus 875 ~~~~ 878 (948)
.+..
T Consensus 330 ~~~~ 333 (337)
T 3mdy_A 330 SESQ 333 (337)
T ss_dssp HHTT
T ss_pred Hhhc
Confidence 7643
No 90
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.5e-39 Score=352.77 Aligned_cols=251 Identities=27% Similarity=0.396 Sum_probs=197.6
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCCh------------------------hhHHHHHHHHHHHH
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISG------------------------KGLTEFKSEIAVLT 646 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~------------------------~~~~~~~~E~~~l~ 646 (948)
.++|++.+.||+|+||.||+|... +++.||||++....... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 468999999999999999999864 68999999997643211 12356899999999
Q ss_pred hcCCCceeeEEeEEEe--CCceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecC
Q 002238 647 KVRHRHLVALLGHCLD--GNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRD 724 (948)
Q Consensus 647 ~l~H~niv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrD 724 (948)
+++||||+++++++.+ .+..++||||+++++|.+++. ...+++.+++.++.|++.||+|||+ .+|+|||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~------~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~D 162 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT------LKPLSEDQARFYFQDLIKGIEYLHY---QKIIHRD 162 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC------SSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh------cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccC
Confidence 9999999999999986 567899999999999987542 2579999999999999999999997 7999999
Q ss_pred CCCccEEEcCCCCeEEeecCCceecCCCCCceeeeecccccccCceecccCC---CCchhhHHHHHHHHHHHHhCCCCCC
Q 002238 725 LKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGR---VTTKVDVFSFGVILMELITGRKALD 801 (948)
Q Consensus 725 ik~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~s~Gv~l~elltg~~p~~ 801 (948)
|||+||+++.++.+||+|||+++....... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||.
T Consensus 163 lkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~ 241 (298)
T 2zv2_A 163 IKPSNLLVGEDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFM 241 (298)
T ss_dssp CCGGGEEECTTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred CCHHHEEECCCCCEEEecCCCccccccccc-cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCC
Confidence 999999999999999999999987654332 334567999999999997765 4789999999999999999999998
Q ss_pred CCCchhhhhHHHHHHHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 802 ESQPEESMHLVTWFRRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
........ . .+......+ +. .......+.+++.+|++.||++||++.|+++
T Consensus 242 ~~~~~~~~---~---~~~~~~~~~-----~~------~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 242 DERIMCLH---S---KIKSQALEF-----PD------QPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp CSSHHHHH---H---HHHHCCCCC-----CS------SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CccHHHHH---H---HHhcccCCC-----CC------ccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 75432211 1 111101000 00 0112245889999999999999999999875
No 91
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=356.56 Aligned_cols=247 Identities=25% Similarity=0.296 Sum_probs=197.2
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCceEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKLLV 669 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv 669 (948)
.++|++.++||+|+||+||+|+.. +|+.||||++............+..|+..+.++ +||||+++++++.+++..++|
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv 135 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ 135 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence 367999999999999999999886 799999999876544555556666777666666 999999999999999999999
Q ss_pred EEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceec
Q 002238 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (948)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~ 749 (948)
|||+ +++|.+++... ...++|..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 136 ~e~~-~~~L~~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~ 207 (311)
T 3p1a_A 136 TELC-GPSLQQHCEAW----GASLPEAQVWGYLRDTLLALAHLHS---QGLVHLDVKPANIFLGPRGRCKLGDFGLLVEL 207 (311)
T ss_dssp EECC-CCBHHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECGGGCEEECCCTTCEEC
T ss_pred Eecc-CCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEccceeeeec
Confidence 9999 67998887542 3569999999999999999999997 79999999999999999999999999999866
Q ss_pred CCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCcccccccc
Q 002238 750 PEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHKAI 829 (948)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 829 (948)
.... ......||++|+|||++.+ .++.++|||||||++|||++|..|+....... ... .....
T Consensus 208 ~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~---------~~~--~~~~~--- 270 (311)
T 3p1a_A 208 GTAG--AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQ---------QLR--QGYLP--- 270 (311)
T ss_dssp C--------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHH---------HHT--TTCCC---
T ss_pred ccCC--CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHH---------HHh--ccCCC---
Confidence 4432 2344569999999998875 79999999999999999999977665421110 000 11010
Q ss_pred CcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 830 DPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 830 ~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
.........++.+++.+|++.||++||+++|+++
T Consensus 271 ------~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 271 ------PEFTAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp ------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ------cccccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 0111122356889999999999999999999986
No 92
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=2.6e-39 Score=355.40 Aligned_cols=265 Identities=25% Similarity=0.407 Sum_probs=214.8
Q ss_pred hcCCcccceecccCceEEEEEEE------cCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCC
Q 002238 592 TNNFSEENILGRGGFGTVYKGEL------HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGN 664 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~ 664 (948)
.++|+..+.||+|+||.||+|++ .+++.||||++.... .....+.+.+|+++++++ +||||+++++++.+++
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 100 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA-HLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 100 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch-hHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence 46789999999999999999985 246899999997642 344567899999999999 9999999999999999
Q ss_pred ceEEEEEecCCCChhHHHHhhhh-------------cCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEE
Q 002238 665 EKLLVFEYMPQGTLSRHIFNWAE-------------EGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNIL 731 (948)
Q Consensus 665 ~~~lv~e~~~~gsL~~~l~~~~~-------------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nil 731 (948)
..++||||+++|+|.+++..... .....+++.+++.++.|++.||+|||+ .+|+||||||+||+
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil 177 (313)
T 1t46_A 101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNIL 177 (313)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEE
T ss_pred CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEE
Confidence 99999999999999999865321 112358999999999999999999997 89999999999999
Q ss_pred EcCCCCeEEeecCCceecCCCCCc-eeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchhhh
Q 002238 732 LGDDMRAKVADFGLVRLAPEGKGS-IETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDESQPEESM 809 (948)
Q Consensus 732 l~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~ 809 (948)
++.++.+||+|||+++........ ......||+.|+|||++.+..++.++||||||+++|||++ |+.||.........
T Consensus 178 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~ 257 (313)
T 1t46_A 178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF 257 (313)
T ss_dssp EETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHH
T ss_pred EcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHH
Confidence 999999999999999866544332 2234557889999999999999999999999999999999 99999876543221
Q ss_pred hHHHHHHHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhh
Q 002238 810 HLVTWFRRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVEL 877 (948)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~ 877 (948)
....... ...... ...+..+.+++.+|++.||.+||++.++++.|+++...
T Consensus 258 --~~~~~~~------~~~~~~---------~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 308 (313)
T 1t46_A 258 --YKMIKEG------FRMLSP---------EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (313)
T ss_dssp --HHHHHHT------CCCCCC---------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --HHHhccC------CCCCCc---------ccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 1111110 000001 11234688999999999999999999999999998764
No 93
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=2.1e-39 Score=364.51 Aligned_cols=251 Identities=21% Similarity=0.338 Sum_probs=199.7
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCC-hhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCceEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS-GKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKLL 668 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~l 668 (948)
.++|++.++||+|+||.||+|+.+ +++.||||++++.... ....+.+.+|..++.++ +||||+++++++.+.+..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 467999999999999999999876 6789999999875433 33345688999999887 89999999999999999999
Q ss_pred EEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCcee
Q 002238 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 748 (948)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~ 748 (948)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 131 V~E~~~gg~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFGla~~ 202 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQR-----QRKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE 202 (396)
T ss_dssp EEECCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEcCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEECCCCCEEEeecceeee
Confidence 9999999999988854 1468999999999999999999997 8999999999999999999999999999985
Q ss_pred cCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhh---hHHHHHHHhhcCcccc
Q 002238 749 APEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESM---HLVTWFRRIHLSKDSF 825 (948)
Q Consensus 749 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~ 825 (948)
..... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||......+.. ........+......+
T Consensus 203 ~~~~~-~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 281 (396)
T 4dc2_A 203 GLRPG-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI 281 (396)
T ss_dssp CCCTT-CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCC
T ss_pred cccCC-CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCC
Confidence 33222 2345568999999999999999999999999999999999999999754321110 0000111111111111
Q ss_pred ccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCCh
Q 002238 826 HKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDM 864 (948)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~ 864 (948)
. . ....++.+++.+|++.||.+||++
T Consensus 282 p----~---------~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 282 P----R---------SLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp C----T---------TSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred C----C---------cCCHHHHHHHHHHhcCCHhHcCCC
Confidence 1 1 122458899999999999999996
No 94
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-39 Score=355.49 Aligned_cols=247 Identities=26% Similarity=0.416 Sum_probs=205.5
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 669 (948)
.++|++.+.||+|+||.||+|+.+ +|+.||||++++... .....+.+.+|+.+++.++||||+++++++.+....++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 367899999999999999999875 789999999976422 123456788999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceec
Q 002238 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (948)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~ 749 (948)
|||+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 85 ~e~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~ 156 (318)
T 1fot_A 85 MDYIEGGELFSLLRK-----SQRFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYV 156 (318)
T ss_dssp ECCCCSCBHHHHHHH-----TSSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCSSCEEC
T ss_pred EeCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChheEEEcCCCCEEEeecCcceec
Confidence 999999999999853 2468999999999999999999997 89999999999999999999999999999875
Q ss_pred CCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCcccccccc
Q 002238 750 PEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHKAI 829 (948)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 829 (948)
... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+... .+......+.
T Consensus 157 ~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~------~i~~~~~~~p--- 223 (318)
T 1fot_A 157 PDV----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYE------KILNAELRFP--- 223 (318)
T ss_dssp SSC----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH------HHHHCCCCCC---
T ss_pred CCc----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHH------HHHhCCCCCC---
Confidence 432 234679999999999999999999999999999999999999998765433211 1111111111
Q ss_pred CcccCCccchHHHHHHHHHHHHHhcccCCCCCC-----ChHHHHH
Q 002238 830 DPTIDLNEGILASISTVAELAGHCCAREPYQRP-----DMGHAVN 869 (948)
Q Consensus 830 ~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RP-----t~~ev~~ 869 (948)
+ ....++.+++.+|++.||++|| +++++++
T Consensus 224 -~---------~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 224 -P---------FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp -T---------TSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred -C---------CCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 1 1124588999999999999999 7877765
No 95
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.9e-40 Score=372.04 Aligned_cols=265 Identities=22% Similarity=0.315 Sum_probs=211.1
Q ss_pred eeHHHHHHhhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEE
Q 002238 583 ISIQVLRNVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVRHRHLVALLGHC 660 (948)
Q Consensus 583 ~~~~~l~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~ 660 (948)
+.+++.+...++|++.+.||+|+||.||+|+.+ +|+.||||++.+... .....+.+.+|..++..++||||+++++++
T Consensus 51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 130 (412)
T 2vd5_A 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF 130 (412)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 345555666789999999999999999999875 799999999975321 222345688999999999999999999999
Q ss_pred EeCCceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEE
Q 002238 661 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKV 740 (948)
Q Consensus 661 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl 740 (948)
.+.+..|+||||+++|+|.+++... ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||
T Consensus 131 ~~~~~~~lVmE~~~gg~L~~~l~~~----~~~l~~~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILld~~g~vkL 203 (412)
T 2vd5_A 131 QDENYLYLVMEYYVGGDLLTLLSKF----GERIPAEMARFYLAEIVMAIDSVHR---LGYVHRDIKPDNILLDRCGHIRL 203 (412)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHHHH----SSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEE
T ss_pred eeCCEEEEEEcCCCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccCHHHeeecCCCCEEE
Confidence 9999999999999999999998542 2468999999999999999999997 89999999999999999999999
Q ss_pred eecCCceecCCCCCceeeeecccccccCceecc-------cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHH
Q 002238 741 ADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAV-------TGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVT 813 (948)
Q Consensus 741 ~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~ 813 (948)
+|||+++.............+||+.|+|||++. +..++.++|||||||++|||++|+.||......+....+.
T Consensus 204 ~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~ 283 (412)
T 2vd5_A 204 ADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIV 283 (412)
T ss_dssp CCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH
T ss_pred eechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 999999876554433334568999999999987 3578999999999999999999999998766544322221
Q ss_pred HHHHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCC---CChHHHHH
Q 002238 814 WFRRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQR---PDMGHAVN 869 (948)
Q Consensus 814 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~R---Pt~~ev~~ 869 (948)
..... . .+ +.. ......++.+++.+|+. +|.+| |+++|+++
T Consensus 284 ~~~~~-~---~~-----p~~-----~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 284 HYKEH-L---SL-----PLV-----DEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp THHHH-C---CC-----C---------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred hcccC-c---CC-----Ccc-----ccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 10000 0 00 000 01123458899999999 99998 58888765
No 96
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=6.4e-39 Score=346.97 Aligned_cols=255 Identities=23% Similarity=0.382 Sum_probs=210.6
Q ss_pred hhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEE
Q 002238 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 669 (948)
..++|++.+.||+|+||.||+|..+ +|+.||+|++..........+.+.+|++++++++||||+++++++.+++..++|
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 83 (284)
T 3kk8_A 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 83 (284)
T ss_dssp TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence 4578999999999999999999875 689999999987665666678899999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCC---eEEeecCCc
Q 002238 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR---AKVADFGLV 746 (948)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~---~kl~DfGla 746 (948)
|||+++++|.+.+... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+|||++
T Consensus 84 ~e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~ 155 (284)
T 3kk8_A 84 FDLVTGGELFEDIVAR-----EFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLA 155 (284)
T ss_dssp ECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred EecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcCcCCCCHHHEEEecCCCCCcEEEeeceee
Confidence 9999999998887531 468999999999999999999997 89999999999999986655 999999999
Q ss_pred eecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCccccc
Q 002238 747 RLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFH 826 (948)
Q Consensus 747 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 826 (948)
....... ......||+.|+|||++.+..++.++||||||+++|||++|+.||...........+ .. ......
T Consensus 156 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~---~~---~~~~~~ 227 (284)
T 3kk8_A 156 IEVNDSE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI---KA---GAYDYP 227 (284)
T ss_dssp EECCSSC--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH---HH---TCCCCC
T ss_pred EEcccCc--cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHH---Hh---ccccCC
Confidence 8665433 233457999999999999999999999999999999999999999876543322111 11 111000
Q ss_pred cccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 827 KAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
.+. ......++.+++.+|++.||++||++.|+++.
T Consensus 228 ---~~~------~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 228 ---SPE------WDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp ---TTT------TTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred ---chh------hcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 000 11223458899999999999999999999874
No 97
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=4e-39 Score=356.92 Aligned_cols=252 Identities=27% Similarity=0.411 Sum_probs=199.6
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCc-----
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNE----- 665 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~----- 665 (948)
.++|++.+.||+|+||.||+|+.+ +|+.||||++.... .....+.+.+|++++++++||||+++++++.+...
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 83 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE 83 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS-TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC-chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence 467999999999999999999986 79999999997643 34456789999999999999999999999866442
Q ss_pred ----------------------------------------------------eEEEEEecCCCChhHHHHhhhhcCCCCC
Q 002238 666 ----------------------------------------------------KLLVFEYMPQGTLSRHIFNWAEEGLKPL 693 (948)
Q Consensus 666 ----------------------------------------------------~~lv~e~~~~gsL~~~l~~~~~~~~~~l 693 (948)
.++||||+++|+|.+++... ......
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~ 161 (332)
T 3qd2_B 84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRR--CSLEDR 161 (332)
T ss_dssp HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTC--CSGGGS
T ss_pred hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcc--cCccch
Confidence 79999999999999998642 222456
Q ss_pred CHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceecCCCCC-----------ceeeeecc
Q 002238 694 EWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKG-----------SIETRIAG 762 (948)
Q Consensus 694 ~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~~~~~~-----------~~~~~~~g 762 (948)
++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....... .......|
T Consensus 162 ~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~g 238 (332)
T 3qd2_B 162 EHGVCLHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVG 238 (332)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-
T ss_pred hhHHHHHHHHHHHHHHHHHHh---CCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCC
Confidence 777899999999999999997 8999999999999999999999999999987655421 12234569
Q ss_pred cccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCccccccccCcccCCccchHHH
Q 002238 763 TFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHKAIDPTIDLNEGILAS 842 (948)
Q Consensus 763 t~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 842 (948)
|+.|+|||++.+..++.++||||||+++|||++|..|+.. ........... .........
T Consensus 239 t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~-----~~~~~~~~~~~---------------~~~~~~~~~ 298 (332)
T 3qd2_B 239 TKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME-----RVRIITDVRNL---------------KFPLLFTQK 298 (332)
T ss_dssp CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH-----HHHHHHHHHTT---------------CCCHHHHHH
T ss_pred CcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH-----HHHHHHHhhcc---------------CCCcccccC
Confidence 9999999999999999999999999999999998765421 11111111100 001112233
Q ss_pred HHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 843 ISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 843 ~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
...+.+++.+|++.||++||++.|+++
T Consensus 299 ~~~~~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 299 YPQEHMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp CHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred ChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence 456789999999999999999999986
No 98
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=5e-39 Score=352.72 Aligned_cols=270 Identities=23% Similarity=0.289 Sum_probs=204.5
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 670 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 670 (948)
.++|++.+.||+|+||.||+|... +|+.||||++..........+.+.+|++++++++||||+++++++.+++..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 468999999999999999999875 5899999998766545555678899999999999999999999999999999999
Q ss_pred EecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceecC
Q 002238 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 750 (948)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~~ 750 (948)
||+++++|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 82 e~~~~~~l~~~~~~-----~~~~~~~~~~~i~~~l~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 153 (311)
T 4agu_A 82 EYCDHTVLHELDRY-----QRGVPEHLVKSITWQTLQAVNFCHK---HNCIHRDVKPENILITKHSVIKLCDFGFARLLT 153 (311)
T ss_dssp ECCSEEHHHHHHHT-----SSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EeCCCchHHHHHhh-----hcCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCChhhEEEcCCCCEEEeeCCCchhcc
Confidence 99999999887632 2568999999999999999999997 899999999999999999999999999998765
Q ss_pred CCCCceeeeecccccccCceeccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHh--------hcC
Q 002238 751 EGKGSIETRIAGTFGYLAPEYAVT-GRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRI--------HLS 821 (948)
Q Consensus 751 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~--------~~~ 821 (948)
.... ......||+.|+|||++.+ ..++.++||||||+++|||++|+.||......+....+...... ...
T Consensus 154 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (311)
T 4agu_A 154 GPSD-YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFST 232 (311)
T ss_dssp -------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHT
T ss_pred Cccc-ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccc
Confidence 4322 2334578999999999876 56899999999999999999999999887654433222211000 000
Q ss_pred cccccc--ccCccc--CCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 822 KDSFHK--AIDPTI--DLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 822 ~~~~~~--~~~~~~--~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
...+.. ..++.- ............+.+++.+|++.||++|||++|+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 233 NQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp CGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred ccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 000000 000000 0000111234568899999999999999999999873
No 99
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=5e-39 Score=353.41 Aligned_cols=270 Identities=24% Similarity=0.365 Sum_probs=194.1
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 670 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 670 (948)
.++|++.+.||+|+||.||+|..+ +|+.||||+++... .....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 82 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS-EEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVF 82 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCS-TTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccc-ccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEE
Confidence 467899999999999999999865 68999999997643 3334567889999999999999999999999999999999
Q ss_pred EecCCCChhHHHHhhhhc-CCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceec
Q 002238 671 EYMPQGTLSRHIFNWAEE-GLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (948)
Q Consensus 671 e~~~~gsL~~~l~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~ 749 (948)
||++ |+|.+++...... ....+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 83 e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 158 (317)
T 2pmi_A 83 EFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE---NKILHRDLKPQNLLINKRGQLKLGDFGLARAF 158 (317)
T ss_dssp ECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCSSCEET
T ss_pred EecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCChHHeEEcCCCCEEECcCccceec
Confidence 9997 5999888653221 22468999999999999999999997 89999999999999999999999999999876
Q ss_pred CCCCCceeeeecccccccCceeccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCcccc-cc
Q 002238 750 PEGKGSIETRIAGTFGYLAPEYAVT-GRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSF-HK 827 (948)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 827 (948)
..... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+....+. .......... ..
T Consensus 159 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~--~~~~~~~~~~~~~ 235 (317)
T 2pmi_A 159 GIPVN-TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIF--DIMGTPNESLWPS 235 (317)
T ss_dssp TSCCC-CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH--HHHCSCCTTTCGG
T ss_pred CCCcc-cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH--HHhCCCChhHhhh
Confidence 43322 2234568999999999876 468999999999999999999999998766544322221 1111000000 00
Q ss_pred ---c--cCcccCC-----------ccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 828 ---A--IDPTIDL-----------NEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 828 ---~--~~~~~~~-----------~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
. ..+.+.. .........++.+++.+|++.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 236 VTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp GGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 0 0000000 0000112346889999999999999999999876
No 100
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=3.9e-39 Score=365.14 Aligned_cols=273 Identities=17% Similarity=0.249 Sum_probs=208.2
Q ss_pred hcCCcccceeccc--CceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEE
Q 002238 592 TNNFSEENILGRG--GFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLL 668 (948)
Q Consensus 592 ~~~~~~~~~lg~G--~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 668 (948)
.++|++.+.||+| +||.||+|+.+ +|+.||||++..........+.+.+|+.+++.++|||||++++++.+++..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 4679999999999 99999999976 79999999998765556667889999999999999999999999999999999
Q ss_pred EEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCcee
Q 002238 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 748 (948)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~ 748 (948)
||||+++|+|.+++.. .....+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||.+..
T Consensus 104 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~ 177 (389)
T 3gni_B 104 VTSFMAYGSAKDLICT---HFMDGMNELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLS 177 (389)
T ss_dssp EEECCTTCBHHHHHHH---TCTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEEccCCCCHHHHHhh---hcccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEccccccee
Confidence 9999999999999854 223568999999999999999999997 8999999999999999999999999998874
Q ss_pred cCCCCC------ceeeeecccccccCceeccc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHH--HHHh
Q 002238 749 APEGKG------SIETRIAGTFGYLAPEYAVT--GRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTW--FRRI 818 (948)
Q Consensus 749 ~~~~~~------~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~--~~~~ 818 (948)
...... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+....... ....
T Consensus 178 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 257 (389)
T 3gni_B 178 MISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCL 257 (389)
T ss_dssp CEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC--------
T ss_pred eccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcc
Confidence 322111 11223468999999999987 5799999999999999999999999987554332111000 0000
Q ss_pred ----hcCccc-------------cccccC--------cccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 819 ----HLSKDS-------------FHKAID--------PTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 819 ----~~~~~~-------------~~~~~~--------~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
...... ....+. ...............+.+++.+|++.||++|||+.|+++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 258 LDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp ------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 000000 000000 0000001112233568899999999999999999999863
No 101
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=5.3e-39 Score=352.32 Aligned_cols=272 Identities=22% Similarity=0.359 Sum_probs=205.7
Q ss_pred hcCCcccceecccCceEEEEEEE-cCCcEEEEEEeecCc-CChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGV-ISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 669 (948)
.++|++.+.||+|+||.||+|.. .+|+.||||++.... ........+.+|+.++++++||||+++++++.+++..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 45799999999999999999986 478999999997532 2345567899999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceec
Q 002238 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (948)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~ 749 (948)
|||+++++|.+++..... ....+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||+++..
T Consensus 111 ~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKK-QKRLIPERTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFF 186 (310)
T ss_dssp EECCCSCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred EecCCCCCHHHHHHHhcc-cccCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence 999999999999865332 34678999999999999999999997 89999999999999999999999999998865
Q ss_pred CCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCcccccccc
Q 002238 750 PEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHKAI 829 (948)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 829 (948)
..... ......||+.|+|||++.+..++.++||||||+++|||++|+.||....... ..... .... .......
T Consensus 187 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~---~~~~--~~~~~~~ 259 (310)
T 2wqm_A 187 SSKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL-YSLCK---KIEQ--CDYPPLP 259 (310)
T ss_dssp -------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCH-HHHHH---HHHT--TCSCCCC
T ss_pred cCCCc-cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhH-HHHHH---Hhhc--ccCCCCc
Confidence 44322 2234568999999999999999999999999999999999999997643221 11111 1111 1111100
Q ss_pred CcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhhhCCCCC
Q 002238 830 DPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELWKPTDQ 883 (948)
Q Consensus 830 ~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~~~~~~~ 883 (948)
. .....++.+++.+|++.||++||++.++++.|+++...+.++..
T Consensus 260 ~---------~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~~~~ 304 (310)
T 2wqm_A 260 S---------DHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASSLE 304 (310)
T ss_dssp T---------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC----
T ss_pred c---------cccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhhhhh
Confidence 0 11234588999999999999999999999999999887776543
No 102
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1e-39 Score=361.48 Aligned_cols=250 Identities=26% Similarity=0.435 Sum_probs=205.3
Q ss_pred hhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcC-ChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCceE
Q 002238 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKL 667 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~ 667 (948)
..++|++.+.||+|+||.||+|+.+ +|+.||||+++.... .......+..|..++..+ +||||+++++++.+.+..+
T Consensus 15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~ 94 (345)
T 1xjd_A 15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF 94 (345)
T ss_dssp -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEE
Confidence 4578999999999999999999875 689999999976421 123456788999999887 9999999999999999999
Q ss_pred EEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCce
Q 002238 668 LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 747 (948)
Q Consensus 668 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~ 747 (948)
+||||+++|+|.+++.. ...+++.++..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 95 lv~E~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~ 166 (345)
T 1xjd_A 95 FVMEYLNGGDLMYHIQS-----CHKFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCK 166 (345)
T ss_dssp EEEECCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred EEEeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCChhhEEECCCCCEEEeEChhhh
Confidence 99999999999999854 1468999999999999999999997 899999999999999999999999999998
Q ss_pred ecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCcccccc
Q 002238 748 LAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHK 827 (948)
Q Consensus 748 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 827 (948)
...... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||......+....+ ......+.
T Consensus 167 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i------~~~~~~~p- 238 (345)
T 1xjd_A 167 ENMLGD-AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI------RMDNPFYP- 238 (345)
T ss_dssp CCCCTT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH------HHCCCCCC-
T ss_pred hcccCC-CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHH------HhCCCCCC-
Confidence 543322 2244567999999999999999999999999999999999999999876543322211 11111111
Q ss_pred ccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChH-HHH
Q 002238 828 AIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMG-HAV 868 (948)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~-ev~ 868 (948)
. ....++.+++.+|++.||++||++. ++.
T Consensus 239 ---~---------~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 239 ---R---------WLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp ---T---------TSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred ---c---------ccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 1 1224588999999999999999997 554
No 103
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.5e-39 Score=359.40 Aligned_cols=265 Identities=25% Similarity=0.412 Sum_probs=209.7
Q ss_pred hcCCcccceecccCceEEEEEEEc------CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCC
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGN 664 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~ 664 (948)
.++|++.+.||+|+||.||+|... ++..||||++.... .....+.+.+|+.+++++ +||||+++++++.+.+
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA-DSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc-CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 578999999999999999999862 45689999997542 334457899999999999 9999999999999999
Q ss_pred ceEEEEEecCCCChhHHHHhhhhc------------------CCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCC
Q 002238 665 EKLLVFEYMPQGTLSRHIFNWAEE------------------GLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLK 726 (948)
Q Consensus 665 ~~~lv~e~~~~gsL~~~l~~~~~~------------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik 726 (948)
..++||||+++|+|.+++...... ....+++..++.++.|++.||+|||+ .+|+|||||
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dik 199 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLA 199 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH---TTEEETTCS
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCC
Confidence 999999999999999998652210 11348999999999999999999997 899999999
Q ss_pred CccEEEcCCCCeEEeecCCceecCCCCC-ceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q 002238 727 PSNILLGDDMRAKVADFGLVRLAPEGKG-SIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDESQ 804 (948)
Q Consensus 727 ~~Nill~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~ 804 (948)
|+||+++.++.+||+|||+++....... .......||+.|+|||++.+..++.++||||||+++|||+| |+.||....
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 279 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 279 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence 9999999999999999999986544332 22334568899999999999999999999999999999998 999998765
Q ss_pred chhhhhHHHHHHHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhh
Q 002238 805 PEESMHLVTWFRRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVEL 877 (948)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~ 877 (948)
..... ...... . . ....+ ......+.+++.+|++.||.+||++.++++.|+.+...
T Consensus 280 ~~~~~--~~~~~~----~--~----~~~~~-----~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 335 (344)
T 1rjb_A 280 VDANF--YKLIQN----G--F----KMDQP-----FYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLAD 335 (344)
T ss_dssp CSHHH--HHHHHT----T--C----CCCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred cHHHH--HHHHhc----C--C----CCCCC-----CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 43221 111111 0 0 00000 11234688999999999999999999999999998653
No 104
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=3.1e-39 Score=355.35 Aligned_cols=264 Identities=28% Similarity=0.425 Sum_probs=210.3
Q ss_pred CcccceecccCceEEEEEEEc-----CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC--CceE
Q 002238 595 FSEENILGRGGFGTVYKGELH-----DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG--NEKL 667 (948)
Q Consensus 595 ~~~~~~lg~G~fg~Vy~~~~~-----~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~ 667 (948)
|++.+.||+|+||.||+|.++ +++.||||++... ......+.+.+|++++++++||||+++++++.+. ...+
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 111 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD-AGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQ 111 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTT-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccc-cChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEE
Confidence 488999999999999998653 6889999999764 2445567899999999999999999999999874 5679
Q ss_pred EEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCce
Q 002238 668 LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 747 (948)
Q Consensus 668 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~ 747 (948)
+||||+++|+|.+++.. ..+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 112 lv~e~~~~~~L~~~l~~------~~~~~~~~~~i~~~l~~~l~~LH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 182 (318)
T 3lxp_A 112 LVMEYVPLGSLRDYLPR------HSIGLAQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFGLAK 182 (318)
T ss_dssp EEECCCTTCBHHHHGGG------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCE
T ss_pred EEEecccCCcHHHHHhh------CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEEcCCCCEEECCccccc
Confidence 99999999999998843 358999999999999999999997 899999999999999999999999999999
Q ss_pred ecCCCCCc--eeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchh---------hhhHHHHHH
Q 002238 748 LAPEGKGS--IETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEE---------SMHLVTWFR 816 (948)
Q Consensus 748 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~---------~~~~~~~~~ 816 (948)
........ ......||+.|+|||++.+..++.++||||||+++|||++|+.||....... .........
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (318)
T 3lxp_A 183 AVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTE 262 (318)
T ss_dssp ECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHH
T ss_pred cccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHH
Confidence 76554322 2234568889999999999999999999999999999999999987532210 000111111
Q ss_pred HhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhhhCC
Q 002238 817 RIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELWKP 880 (948)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~~~~ 880 (948)
.... . ... ......+.++.+++.+|++.||.+||++.++++.|+.+.+.+..
T Consensus 263 ~~~~-~------~~~-----~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~ 314 (318)
T 3lxp_A 263 LLER-G------ERL-----PRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQG 314 (318)
T ss_dssp HHHT-T------CCC-----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC
T ss_pred HHhc-c------cCC-----CCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhcc
Confidence 1000 0 000 01112335689999999999999999999999999999876643
No 105
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=4.5e-39 Score=356.75 Aligned_cols=266 Identities=26% Similarity=0.421 Sum_probs=214.6
Q ss_pred hcCCcccceecccCceEEEEEEEc--------CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEe
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH--------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLD 662 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~--------~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~ 662 (948)
.++|++.+.||+|+||.||+|++. ++..||||++.... .....+.+.+|+++++++ +||||+++++++.+
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC-cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 468999999999999999999863 46789999987642 445567899999999999 99999999999999
Q ss_pred CCceEEEEEecCCCChhHHHHhhhhc-----------CCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEE
Q 002238 663 GNEKLLVFEYMPQGTLSRHIFNWAEE-----------GLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNIL 731 (948)
Q Consensus 663 ~~~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nil 731 (948)
.+..++||||+++|+|.+++...... ....+++..++.++.|++.||+|||+ .+|+||||||+||+
T Consensus 113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIl 189 (334)
T 2pvf_A 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVL 189 (334)
T ss_dssp SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEE
T ss_pred CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCccceEE
Confidence 99999999999999999998653211 12358999999999999999999997 89999999999999
Q ss_pred EcCCCCeEEeecCCceecCCCCCc-eeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchhhh
Q 002238 732 LGDDMRAKVADFGLVRLAPEGKGS-IETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDESQPEESM 809 (948)
Q Consensus 732 l~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~ 809 (948)
++.++.+||+|||+++........ ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||......+..
T Consensus 190 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~ 269 (334)
T 2pvf_A 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269 (334)
T ss_dssp ECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH
T ss_pred EcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHH
Confidence 999999999999999866543321 1233457889999999999999999999999999999999 99999876543322
Q ss_pred hHHHHHHHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhhhC
Q 002238 810 HLVTWFRRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELWK 879 (948)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~~~ 879 (948)
..+ ..... ... .......+.+++.+|++.+|.+||++.++++.|+.+.....
T Consensus 270 ~~~---~~~~~----------~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~ 321 (334)
T 2pvf_A 270 KLL---KEGHR----------MDK-----PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321 (334)
T ss_dssp HHH---HHTCC----------CCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred HHH---hcCCC----------CCC-----CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccc
Confidence 111 11100 000 01123458899999999999999999999999999987544
No 106
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1e-39 Score=360.21 Aligned_cols=249 Identities=25% Similarity=0.377 Sum_probs=203.8
Q ss_pred hcCCcccceecccCceEEEEEEE-cCCcEEEEEEeecCcCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVIS-GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 669 (948)
.++|++.+.||+|+||.||+|.. .+++.||||++...... ......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 46899999999999999999987 47899999998754222 22246789999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceec
Q 002238 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (948)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~ 749 (948)
|||+ +|+|.+++.. ...+++.++..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 88 ~E~~-~g~l~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~ 158 (336)
T 3h4j_B 88 IEYA-GGELFDYIVE-----KKRMTEDEGRRFFQQIICAIEYCHR---HKIVHRDLKPENLLLDDNLNVKIADFGLSNIM 158 (336)
T ss_dssp ECCC-CEEHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCCSTTTEEECTTCCEEECCSSCTBTT
T ss_pred EECC-CCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCchhhEEEcCCCCEEEEEeccceec
Confidence 9999 7899888753 1468999999999999999999997 79999999999999999999999999999866
Q ss_pred CCCCCceeeeecccccccCceecccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCccccccc
Q 002238 750 PEGKGSIETRIAGTFGYLAPEYAVTGRV-TTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHKA 828 (948)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 828 (948)
.... ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||.+....... ...
T Consensus 159 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~----------------~~i 220 (336)
T 3h4j_B 159 TDGN--FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLF----------------KKV 220 (336)
T ss_dssp TTSB--TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCB----------------CCC
T ss_pred cCCc--ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHH----------------HHH
Confidence 5432 2344579999999999988776 78999999999999999999999765432210 011
Q ss_pred cCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 829 IDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 829 ~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
........ ......+.+++.+|++.||.+|||++|+++.
T Consensus 221 ~~~~~~~p---~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 221 NSCVYVMP---DFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp CSSCCCCC---TTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred HcCCCCCc---ccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 01111101 1123458899999999999999999999875
No 107
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=5e-39 Score=357.95 Aligned_cols=252 Identities=26% Similarity=0.371 Sum_probs=190.9
Q ss_pred HhhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEE
Q 002238 590 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLL 668 (948)
Q Consensus 590 ~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 668 (948)
.+.++|++.+.||+|+||.||+|+.+ +++.||||++.... ..+.+.+|++++++++||||+++++++.+++..++
T Consensus 50 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 125 (349)
T 2w4o_A 50 ALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV----DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISL 125 (349)
T ss_dssp CGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC--------------CHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch----hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEE
Confidence 35678999999999999999999876 57899999987542 34678899999999999999999999999999999
Q ss_pred EEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcC---CCCeEEeecCC
Q 002238 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD---DMRAKVADFGL 745 (948)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~---~~~~kl~DfGl 745 (948)
||||+++|+|.+++.. ...+++.+++.++.|++.||+|||+ .+|+||||||+||+++. ++.+||+|||+
T Consensus 126 v~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~ 197 (349)
T 2w4o_A 126 VLELVTGGELFDRIVE-----KGYYSERDAADAVKQILEAVAYLHE---NGIVHRDLKPENLLYATPAPDAPLKIADFGL 197 (349)
T ss_dssp EECCCCSCBHHHHHTT-----CSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESSSSTTCCEEECCCC-
T ss_pred EEEeCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCcccEEEecCCCCCCEEEccCcc
Confidence 9999999999998842 3568999999999999999999997 79999999999999975 88999999999
Q ss_pred ceecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCcccc
Q 002238 746 VRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSF 825 (948)
Q Consensus 746 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 825 (948)
++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ .. ..+.......
T Consensus 198 a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~--~~---~~i~~~~~~~ 270 (349)
T 2w4o_A 198 SKIVEHQV--LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQF--MF---RRILNCEYYF 270 (349)
T ss_dssp -----------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHH--HH---HHHHTTCCCC
T ss_pred ccccCccc--ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHH--HH---HHHHhCCCcc
Confidence 98654322 23446799999999999999999999999999999999999999976554321 11 1111111110
Q ss_pred ccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 826 HKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
. .+ .......++.+++.+|++.||++||++.++++
T Consensus 271 ~---~~------~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 271 I---SP------WWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp C---TT------TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred C---Cc------hhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 00 11122346889999999999999999999977
No 108
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=3.3e-39 Score=358.75 Aligned_cols=247 Identities=25% Similarity=0.333 Sum_probs=205.9
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 669 (948)
.++|++.+.||+|+||.||+|+.+ +|+.||||++..... .....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 367999999999999999999875 689999999975422 223457789999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceec
Q 002238 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (948)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~ 749 (948)
|||+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 120 ~e~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~ 191 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRI-----GRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191 (350)
T ss_dssp EECCTTCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EcCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCccceEEECCCCCEEEcccccceec
Confidence 9999999999998541 468999999999999999999997 89999999999999999999999999999876
Q ss_pred CCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCcccccccc
Q 002238 750 PEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHKAI 829 (948)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 829 (948)
... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+... .+......+
T Consensus 192 ~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~------~i~~~~~~~---- 257 (350)
T 1rdq_E 192 KGR----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE------KIVSGKVRF---- 257 (350)
T ss_dssp SSC----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH------HHHHCCCCC----
T ss_pred cCC----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHH------HHHcCCCCC----
Confidence 442 234579999999999999999999999999999999999999998765433221 111111111
Q ss_pred CcccCCccchHHHHHHHHHHHHHhcccCCCCCCC-----hHHHHH
Q 002238 830 DPTIDLNEGILASISTVAELAGHCCAREPYQRPD-----MGHAVN 869 (948)
Q Consensus 830 ~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt-----~~ev~~ 869 (948)
.. .....+.+++.+|++.||.+||+ ++++++
T Consensus 258 p~---------~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 258 PS---------HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp CT---------TCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred CC---------CCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 11 12245889999999999999998 777765
No 109
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=2.5e-39 Score=353.52 Aligned_cols=264 Identities=23% Similarity=0.427 Sum_probs=206.8
Q ss_pred hcCCcccceecccCceEEEEEEE-----cCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC--C
Q 002238 592 TNNFSEENILGRGGFGTVYKGEL-----HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG--N 664 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~ 664 (948)
.++|++.+.||+|+||.||+|++ .+++.||||++.... .....+.+.+|++++++++||||+++++++.+. .
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 98 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGN 98 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---C
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCc
Confidence 35688899999999999999984 368999999987543 344567899999999999999999999999876 6
Q ss_pred ceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecC
Q 002238 665 EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 744 (948)
Q Consensus 665 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfG 744 (948)
..++||||+++|+|.+++.. ....+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.++|+|||
T Consensus 99 ~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg 171 (302)
T 4e5w_A 99 GIKLIMEFLPSGSLKEYLPK----NKNKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFG 171 (302)
T ss_dssp CEEEEEECCTTCBHHHHHHH----HTTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCT
T ss_pred eEEEEEEeCCCCcHHHHHHh----ccccCCHHHHHHHHHHHHHHHHHhhc---CCcccCCCchheEEEcCCCCEEECccc
Confidence 68999999999999999844 22568999999999999999999997 899999999999999999999999999
Q ss_pred CceecCCCCCc--eeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch---------hhhhHHH
Q 002238 745 LVRLAPEGKGS--IETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPE---------ESMHLVT 813 (948)
Q Consensus 745 la~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~---------~~~~~~~ 813 (948)
+++........ ......||..|+|||++.+..++.++||||||+++|||++|+.|+...... .......
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 251 (302)
T 4e5w_A 172 LTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTR 251 (302)
T ss_dssp TCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHH
T ss_pred ccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHH
Confidence 99876554321 223456888999999999999999999999999999999999986432110 0001111
Q ss_pred HHHHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhh
Q 002238 814 WFRRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLV 875 (948)
Q Consensus 814 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~ 875 (948)
....... .. ... ........+.+++.+|++.||.+||++.++++.|+.++
T Consensus 252 ~~~~~~~-~~------~~~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 252 LVNTLKE-GK------RLP-----CPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHHHHHT-TC------CCC-----CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHhc-cC------CCC-----CCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 1111100 00 000 01122346889999999999999999999999999875
No 110
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.7e-39 Score=365.15 Aligned_cols=270 Identities=27% Similarity=0.387 Sum_probs=198.6
Q ss_pred HHhhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcC-CCceeeEEeEEEeCC--
Q 002238 589 RNVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR-HRHLVALLGHCLDGN-- 664 (948)
Q Consensus 589 ~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~-- 664 (948)
+.+.++|++.+.||+|+||.||+|... +|+.||||++............+.+|+.+++.+. ||||+++++++...+
T Consensus 5 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~ 84 (388)
T 3oz6_A 5 RHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDR 84 (388)
T ss_dssp HHHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSS
T ss_pred CcccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCC
Confidence 356789999999999999999999864 7899999999765555666778899999999997 999999999997544
Q ss_pred ceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecC
Q 002238 665 EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 744 (948)
Q Consensus 665 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfG 744 (948)
..++||||++ |+|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 85 ~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG 154 (388)
T 3oz6_A 85 DVYLVFDYME-TDLHAVIRA------NILEPVHKQYVVYQLIKVIKYLHS---GGLLHRDMKPSNILLNAECHVKVADFG 154 (388)
T ss_dssp CEEEEEECCS-EEHHHHHHH------TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEEecccC-cCHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHeEEcCCCCEEecCCc
Confidence 6899999997 689888843 468999999999999999999997 899999999999999999999999999
Q ss_pred CceecCCCC--------------------CceeeeecccccccCceeccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 002238 745 LVRLAPEGK--------------------GSIETRIAGTFGYLAPEYAVT-GRVTTKVDVFSFGVILMELITGRKALDES 803 (948)
Q Consensus 745 la~~~~~~~--------------------~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~elltg~~p~~~~ 803 (948)
+++...... ....+..+||+.|+|||++.+ ..++.++||||+||++|||++|++||.+.
T Consensus 155 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 234 (388)
T 3oz6_A 155 LSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGS 234 (388)
T ss_dssp TCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCC
Confidence 998653311 112344679999999999987 67899999999999999999999999876
Q ss_pred CchhhhhHHHHHHHhhcCccccccccCc-----------------ccCCccc-------------hHHHHHHHHHHHHHh
Q 002238 804 QPEESMHLVTWFRRIHLSKDSFHKAIDP-----------------TIDLNEG-------------ILASISTVAELAGHC 853 (948)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~-------------~~~~~~~l~~li~~c 853 (948)
...+....+. .............+.. ....... ......++.+++.+|
T Consensus 235 ~~~~~~~~i~--~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~ 312 (388)
T 3oz6_A 235 STMNQLERII--GVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKL 312 (388)
T ss_dssp SHHHHHHHHH--HHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHH
T ss_pred CHHHHHHHHH--HhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHh
Confidence 6544322221 1111110000000000 0000000 001234688999999
Q ss_pred cccCCCCCCChHHHHHH
Q 002238 854 CAREPYQRPDMGHAVNV 870 (948)
Q Consensus 854 ~~~~P~~RPt~~ev~~~ 870 (948)
++.||++|||++|++++
T Consensus 313 L~~dP~~R~t~~e~l~H 329 (388)
T 3oz6_A 313 LQFNPNKRISANDALKH 329 (388)
T ss_dssp CCSSGGGSCCHHHHTTS
T ss_pred hccCcccCCCHHHHhCC
Confidence 99999999999999874
No 111
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8e-39 Score=346.77 Aligned_cols=261 Identities=23% Similarity=0.379 Sum_probs=211.7
Q ss_pred cCCcccc-eecccCceEEEEEEEc---CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEE
Q 002238 593 NNFSEEN-ILGRGGFGTVYKGELH---DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLL 668 (948)
Q Consensus 593 ~~~~~~~-~lg~G~fg~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 668 (948)
++|.+.. .||+|+||.||+|.+. ++..||||+++.. ......+.+.+|++++++++||||+++++++ ..+..++
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~l 86 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG-TEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALML 86 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCc-cchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEE
Confidence 4566665 8999999999999753 5788999999764 2445567899999999999999999999999 5667899
Q ss_pred EEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCcee
Q 002238 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 748 (948)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~ 748 (948)
||||+++++|.+++.. ....+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.++|+|||+++.
T Consensus 87 v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~ 159 (287)
T 1u59_A 87 VMEMAGGGPLHKFLVG----KREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKA 159 (287)
T ss_dssp EEECCTTEEHHHHHTT----CTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEeCCCCCHHHHHHh----CCccCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCchheEEEcCCCCEEECcccceee
Confidence 9999999999998842 33568999999999999999999997 8999999999999999999999999999987
Q ss_pred cCCCCCce--eeeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHhhcCcccc
Q 002238 749 APEGKGSI--ETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDESQPEESMHLVTWFRRIHLSKDSF 825 (948)
Q Consensus 749 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 825 (948)
........ .....||+.|+|||++.+..++.++||||||+++|||++ |+.||......+....+ .. ..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i---~~---~~--- 230 (287)
T 1u59_A 160 LGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFI---EQ---GK--- 230 (287)
T ss_dssp CTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHH---HT---TC---
T ss_pred eccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHH---hc---CC---
Confidence 65433221 223456899999999998999999999999999999999 99999876544322111 11 00
Q ss_pred ccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhhhCC
Q 002238 826 HKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELWKP 880 (948)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~~~~ 880 (948)
.+.. ....+..+.+++.+|++.+|++||++.++++.|+.+......
T Consensus 231 ----~~~~-----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~ 276 (287)
T 1u59_A 231 ----RMEC-----PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS 276 (287)
T ss_dssp ----CCCC-----CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHT
T ss_pred ----cCCC-----CCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCC
Confidence 0001 112234688999999999999999999999999999765543
No 112
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=361.73 Aligned_cols=255 Identities=21% Similarity=0.311 Sum_probs=200.6
Q ss_pred hcCCcccceecccCceEEEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCC--CceeeEEeEEEeCCceEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRH--RHLVALLGHCLDGNEKLLV 669 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H--~niv~l~~~~~~~~~~~lv 669 (948)
.++|++.+.||+|+||.||+|..++++.||||++..........+.+.+|++++++++| |||+++++++.++...++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 45799999999999999999998889999999998765566667889999999999986 9999999999999999999
Q ss_pred EEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceec
Q 002238 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (948)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~ 749 (948)
|| +.+|+|.+++.. ...+++.++..++.|++.||+|||+ .+|+||||||+|||++ ++.+||+|||+++..
T Consensus 88 ~e-~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~al~~lH~---~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~ 157 (343)
T 3dbq_A 88 ME-CGNIDLNSWLKK-----KKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQM 157 (343)
T ss_dssp EC-CCSEEHHHHHHH-----SCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC
T ss_pred Ee-CCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEE-CCcEEEeeccccccc
Confidence 99 568899999853 2578999999999999999999997 8999999999999997 578999999999866
Q ss_pred CCCCCc-eeeeecccccccCceeccc-----------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHH
Q 002238 750 PEGKGS-IETRIAGTFGYLAPEYAVT-----------GRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRR 817 (948)
Q Consensus 750 ~~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 817 (948)
...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ....
T Consensus 158 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-----~~~~ 232 (343)
T 3dbq_A 158 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS-----KLHA 232 (343)
T ss_dssp ------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH-----HHHH
T ss_pred CcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHH-----HHHH
Confidence 443322 2345679999999999865 6789999999999999999999999976433211 1111
Q ss_pred hhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHH
Q 002238 818 IHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLS 872 (948)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~ 872 (948)
...... ...+.. .....+.+++.+|++.||.+||++.|+++.-.
T Consensus 233 ~~~~~~--~~~~~~---------~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~ 276 (343)
T 3dbq_A 233 IIDPNH--EIEFPD---------IPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 276 (343)
T ss_dssp HHCTTS--CCCCCC---------CSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred HhcCCc--ccCCcc---------cCCHHHHHHHHHHcCCChhHCCCHHHHHhCcc
Confidence 111000 000000 11235889999999999999999999988643
No 113
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.4e-39 Score=382.80 Aligned_cols=260 Identities=30% Similarity=0.483 Sum_probs=211.9
Q ss_pred hcCCcccceecccCceEEEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFE 671 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 671 (948)
.++|++.+.||+|+||.||+|.++++..||||+++... ...++|.+|++++++++||||+++++++.+ +..++|||
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e 341 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 341 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC---CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeee
Confidence 46788899999999999999999878899999997643 234689999999999999999999999876 67899999
Q ss_pred ecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceecCC
Q 002238 672 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE 751 (948)
Q Consensus 672 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~~~ 751 (948)
|+++|+|.+++.... ...+++.+++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++....
T Consensus 342 ~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 415 (535)
T 2h8h_A 342 YMSKGSLLDFLKGET---GKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIED 415 (535)
T ss_dssp CCTTEEHHHHHSHHH---HTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCC
T ss_pred hhcCCcHHHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEEcCCCcEEEcccccceecCC
Confidence 999999999995421 2468999999999999999999997 8999999999999999999999999999986543
Q ss_pred CCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHhhcCccccccccC
Q 002238 752 GKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDESQPEESMHLVTWFRRIHLSKDSFHKAID 830 (948)
Q Consensus 752 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 830 (948)
..........+|..|+|||++.+..++.++|||||||++|||++ |+.||.+....+....+ .. . ......
T Consensus 416 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i------~~-~--~~~~~~ 486 (535)
T 2h8h_A 416 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV------ER-G--YRMPCP 486 (535)
T ss_dssp HHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHH------HT-T--CCCCCC
T ss_pred CceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH------Hc-C--CCCCCC
Confidence 22111223456789999999999999999999999999999999 99999876544322111 11 0 000001
Q ss_pred cccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhhhC
Q 002238 831 PTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELWK 879 (948)
Q Consensus 831 ~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~~~ 879 (948)
......+.+++.+||+.||++||++.+|++.|+.+.....
T Consensus 487 ---------~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~ 526 (535)
T 2h8h_A 487 ---------PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 526 (535)
T ss_dssp ---------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCS
T ss_pred ---------CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccC
Confidence 1223468899999999999999999999999998865433
No 114
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.9e-40 Score=365.56 Aligned_cols=275 Identities=13% Similarity=0.184 Sum_probs=214.3
Q ss_pred hcCCcccceecccCceEEEEEEEcC---------CcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceee-------
Q 002238 592 TNNFSEENILGRGGFGTVYKGELHD---------GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVA------- 655 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~~---------g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~------- 655 (948)
.++|++.+.||+|+||.||+|+... ++.||||++... ..+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-------~~~~~E~~~l~~l~h~niv~~~~~~~~ 113 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-------GRLFNEQNFFQRAAKPLQVNKWKKLYS 113 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-------STHHHHHHHHHHHCCHHHHHHHHHHTT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-------chHHHHHHHHHHhcccchhhhhhhhcc
Confidence 3689999999999999999998763 789999998753 36889999999999999987
Q ss_pred --------EEeEEEe-CCceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCC
Q 002238 656 --------LLGHCLD-GNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLK 726 (948)
Q Consensus 656 --------l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik 726 (948)
+++++.. +...++||||+ +++|.+++... ....+++.+++.++.||+.||+|||+ .+|+|||||
T Consensus 114 ~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~---~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dik 186 (352)
T 2jii_A 114 TPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS---PKHVLSERSVLQVACRLLDALEFLHE---NEYVHGNVT 186 (352)
T ss_dssp CTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS---GGGCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCC
T ss_pred CCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhC---CcCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCC
Confidence 6777776 67789999999 99999999642 12579999999999999999999997 799999999
Q ss_pred CccEEEcCCC--CeEEeecCCceecCCCCC------ceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCC
Q 002238 727 PSNILLGDDM--RAKVADFGLVRLAPEGKG------SIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRK 798 (948)
Q Consensus 727 ~~Nill~~~~--~~kl~DfGla~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~ 798 (948)
|+||+++.++ .+||+|||+++....... .......||+.|+|||++.+..++.++||||||+++|||++|+.
T Consensus 187 p~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~ 266 (352)
T 2jii_A 187 AENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFL 266 (352)
T ss_dssp GGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCC
Confidence 9999999998 899999999986543221 11233579999999999999999999999999999999999999
Q ss_pred CCCCCCchhhhhHHHHHHHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhhh
Q 002238 799 ALDESQPEESMHLVTWFRRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELW 878 (948)
Q Consensus 799 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~~ 878 (948)
||....+... .............. ...+... .......++.+++.+|++.||++||+++++++.|+++.+..
T Consensus 267 pf~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 338 (352)
T 2jii_A 267 PWTNCLPNTE-DIMKQKQKFVDKPG---PFVGPCG----HWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDL 338 (352)
T ss_dssp TTGGGTTCHH-HHHHHHHHHHHSCC---CEECTTS----CEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred CcccCCcCHH-HHHHHHHhccCChh---hhhhhcc----ccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhc
Confidence 9987542221 11111111111111 1111100 01112346889999999999999999999999999999887
Q ss_pred CCCCCCCccc
Q 002238 879 KPTDQNSEDI 888 (948)
Q Consensus 879 ~~~~~~~~~~ 888 (948)
........+|
T Consensus 339 ~~~~~~~~dw 348 (352)
T 2jii_A 339 RVSPYDPIGL 348 (352)
T ss_dssp TCCTTSCCCC
T ss_pred CCCcCccccC
Confidence 7665555555
No 115
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=3.9e-39 Score=348.12 Aligned_cols=258 Identities=23% Similarity=0.387 Sum_probs=206.7
Q ss_pred hcCCcccceecccCceEEEEEEEcC----CcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELHD----GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKL 667 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~~----g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 667 (948)
.++|++.+.||+|+||.||+|.+.+ +..||||++.... .....+.+.+|+.++++++||||+++++++.+ +..+
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~ 88 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC-TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTW 88 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS-CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc-CchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCE
Confidence 4679999999999999999998642 3469999987642 34556789999999999999999999999764 4578
Q ss_pred EEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCce
Q 002238 668 LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 747 (948)
Q Consensus 668 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~ 747 (948)
+||||+++++|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 89 ~v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 161 (281)
T 3cc6_A 89 IIMELYPYGELGHYLER----NKNSLKVLTLVLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSR 161 (281)
T ss_dssp EEEECCTTCBHHHHHHH----HTTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEEETTEEEECCCCGGG
T ss_pred EEEecCCCCCHHHHHHh----ccccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEECCCCcEEeCccCCCc
Confidence 99999999999999854 22568999999999999999999997 899999999999999999999999999998
Q ss_pred ecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHhhcCccccc
Q 002238 748 LAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDESQPEESMHLVTWFRRIHLSKDSFH 826 (948)
Q Consensus 748 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 826 (948)
..............+|+.|+|||++.+..++.++||||||+++|||++ |+.||......+....+ ..... .
T Consensus 162 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~---~~~~~----~- 233 (281)
T 3cc6_A 162 YIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVL---EKGDR----L- 233 (281)
T ss_dssp CC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHH---HHTCC----C-
T ss_pred ccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHH---hcCCC----C-
Confidence 665443333344567889999999999999999999999999999998 99999876544332211 11000 0
Q ss_pred cccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhh
Q 002238 827 KAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVE 876 (948)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~ 876 (948)
..+ ......+.+++.+|++.||++||++.++++.|+.+.+
T Consensus 234 --~~~--------~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 273 (281)
T 3cc6_A 234 --PKP--------DLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQ 273 (281)
T ss_dssp --CCC--------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --CCC--------CCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence 000 1122458899999999999999999999999999865
No 116
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=2.7e-39 Score=357.03 Aligned_cols=258 Identities=26% Similarity=0.446 Sum_probs=204.4
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcE----EEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCce
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTK----IAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEK 666 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~----vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 666 (948)
.++|++.+.||+|+||.||+|.+. +++. ||+|++.... .......+.+|+.++++++||||+++++++. ++..
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~ 89 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS-GRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSL 89 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTT-SCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSE
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccc-cHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCcc
Confidence 357899999999999999999864 4554 7788775432 2333456789999999999999999999886 5678
Q ss_pred EEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCc
Q 002238 667 LLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLV 746 (948)
Q Consensus 667 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla 746 (948)
++||||+++|+|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++
T Consensus 90 ~~v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a 162 (325)
T 3kex_A 90 QLVTQYLPLGSLLDHVRQ----HRGALGPQLLLNWGVQIAKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVA 162 (325)
T ss_dssp EEEEECCTTCBSHHHHHS----SGGGSCTTHHHHHHHHHHHHHHHHHH---TTCCCSCCSSTTEEESSSSCEEECSCSGG
T ss_pred EEEEEeCCCCCHHHHHHH----ccccCCHHHHHHHHHHHHHHHHHHHh---CCCCCCccchheEEECCCCeEEECCCCcc
Confidence 999999999999998853 22468889999999999999999997 79999999999999999999999999999
Q ss_pred eecCCCCC-ceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHhhcCccc
Q 002238 747 RLAPEGKG-SIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDESQPEESMHLVTWFRRIHLSKDS 824 (948)
Q Consensus 747 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 824 (948)
+....... .......||+.|+|||++.+..++.++||||||+++|||++ |+.||......+....+. . ...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~---~----~~~ 235 (325)
T 3kex_A 163 DLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLE---K----GER 235 (325)
T ss_dssp GGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHH---T----TCB
T ss_pred cccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHH---c----CCC
Confidence 87654432 22344568889999999999999999999999999999999 999998765443322221 1 000
Q ss_pred cccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhh
Q 002238 825 FHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVE 876 (948)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~ 876 (948)
...+. .....+.+++.+|++.||.+||++.++++.|+.+..
T Consensus 236 ---~~~~~--------~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 236 ---LAQPQ--------ICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp ---CCCCT--------TBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred ---CCCCC--------cCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 00000 011237789999999999999999999999998864
No 117
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.3e-38 Score=354.41 Aligned_cols=276 Identities=21% Similarity=0.335 Sum_probs=215.7
Q ss_pred eHHHHHHhhcCCcccceecccCceEEEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHh--cCCCceeeEEeEEE
Q 002238 584 SIQVLRNVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTK--VRHRHLVALLGHCL 661 (948)
Q Consensus 584 ~~~~l~~~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~ 661 (948)
+....+.+.++|++.+.||+|+||.||+|+.. |+.||||++... ....+.+|++++.. ++||||+++++++.
T Consensus 33 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~ 106 (342)
T 1b6c_B 33 PLLVQRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADN 106 (342)
T ss_dssp CHHHHHHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGG-----GHHHHHHHHHHHHHSCCCCTTBCCEEEEEE
T ss_pred ceeecccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCch-----hHHHHHHHHHHHHHhhcCCCcEEEEEeeec
Confidence 34445667789999999999999999999985 899999998642 34678889999888 79999999999998
Q ss_pred eCC----ceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcc-----CCCeeecCCCCccEEE
Q 002238 662 DGN----EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLA-----HQSFIHRDLKPSNILL 732 (948)
Q Consensus 662 ~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-----~~~ivHrDik~~Nill 732 (948)
... ..++||||+++|+|.+++.. ..+++.+++.++.|++.||+|||+.. +.+|+||||||+||++
T Consensus 107 ~~~~~~~~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll 180 (342)
T 1b6c_B 107 KDNGTWTQLWLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV 180 (342)
T ss_dssp CCCSSCCCEEEEECCCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEE
T ss_pred ccCCccceeEEEEeecCCCcHHHHHhc------cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEE
Confidence 776 78999999999999999853 46899999999999999999999210 2799999999999999
Q ss_pred cCCCCeEEeecCCceecCCCCCc---eeeeecccccccCceecccC------CCCchhhHHHHHHHHHHHHhC-------
Q 002238 733 GDDMRAKVADFGLVRLAPEGKGS---IETRIAGTFGYLAPEYAVTG------RVTTKVDVFSFGVILMELITG------- 796 (948)
Q Consensus 733 ~~~~~~kl~DfGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~s~Gv~l~elltg------- 796 (948)
+.++.+||+|||+++........ ......||+.|+|||++.+. .++.++||||||+++|||++|
T Consensus 181 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~ 260 (342)
T 1b6c_B 181 KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIH 260 (342)
T ss_dssp CTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBC
T ss_pred CCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcc
Confidence 99999999999999866544322 12345799999999998775 334789999999999999999
Q ss_pred ---CCCCCCCCchhhhhHHHHHHHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHh
Q 002238 797 ---RKALDESQPEESMHLVTWFRRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSS 873 (948)
Q Consensus 797 ---~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~ 873 (948)
+.||........ ....+..... .....+.+............+.+++.+||+.||++||++.+|++.|+.
T Consensus 261 ~~~~~p~~~~~~~~~-~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~ 333 (342)
T 1b6c_B 261 EDYQLPYYDLVPSDP-SVEEMRKVVC------EQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 333 (342)
T ss_dssp CCCCCTTTTTSCSSC-CHHHHHHHHT------TSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred cccccCccccCcCcc-cHHHHHHHHH------HHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHH
Confidence 778866543211 1111111111 111222222122233556679999999999999999999999999999
Q ss_pred hhhhh
Q 002238 874 LVELW 878 (948)
Q Consensus 874 ~~~~~ 878 (948)
+.+..
T Consensus 334 i~~~~ 338 (342)
T 1b6c_B 334 LSQQE 338 (342)
T ss_dssp HHHTT
T ss_pred HHHHh
Confidence 97654
No 118
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=5.8e-39 Score=360.23 Aligned_cols=247 Identities=28% Similarity=0.361 Sum_probs=197.7
Q ss_pred cceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEEEEecCCC
Q 002238 598 ENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQG 676 (948)
Q Consensus 598 ~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 676 (948)
.+.||+|+||.||+|... +|+.||||+++.. .....+.+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~ 171 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTR--GMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGG 171 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECC--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEccc--ccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence 578999999999999874 6899999999864 3355678999999999999999999999999999999999999999
Q ss_pred ChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEE--cCCCCeEEeecCCceecCCCCC
Q 002238 677 TLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL--GDDMRAKVADFGLVRLAPEGKG 754 (948)
Q Consensus 677 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill--~~~~~~kl~DfGla~~~~~~~~ 754 (948)
+|.+++.. ....+++..++.++.||+.||+|||+ .+|+||||||+|||+ +.++.+||+|||+++......
T Consensus 172 ~L~~~l~~----~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~- 243 (373)
T 2x4f_A 172 ELFDRIID----ESYNLTELDTILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE- 243 (373)
T ss_dssp EEHHHHHH----TGGGCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC-
T ss_pred cHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc-
Confidence 99988853 22468999999999999999999997 899999999999999 567789999999999765433
Q ss_pred ceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCccccccccCcccC
Q 002238 755 SIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHKAIDPTID 834 (948)
Q Consensus 755 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 834 (948)
......||+.|+|||++.+..++.++|||||||++|||++|+.||......+....+ ......+.
T Consensus 244 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i------~~~~~~~~-------- 308 (373)
T 2x4f_A 244 -KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNI------LACRWDLE-------- 308 (373)
T ss_dssp -BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH------HHTCCCSC--------
T ss_pred -ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH------HhccCCCC--------
Confidence 223456999999999999999999999999999999999999999876543321111 11010000
Q ss_pred CccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 835 LNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 835 ~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
.........++.+++.+|++.||.+||++.|+++.
T Consensus 309 -~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 309 -DEEFQDISEEAKEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp -SGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -hhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 01111223568899999999999999999999873
No 119
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=3.6e-39 Score=349.01 Aligned_cols=255 Identities=26% Similarity=0.378 Sum_probs=202.2
Q ss_pred hhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEE
Q 002238 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 669 (948)
+.++|.+.+.||+|+||.||+|..+ +++.||+|++.... .....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 20 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 98 (285)
T 3is5_A 20 IDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR-SQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIV 98 (285)
T ss_dssp HHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG-CCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccc-cchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEE
Confidence 3467999999999999999999875 68999999987653 334467899999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEE---cCCCCeEEeecCCc
Q 002238 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGLV 746 (948)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill---~~~~~~kl~DfGla 746 (948)
|||+++|+|.+++...... ...+++..++.++.|++.||+|||+ .+|+||||||+||++ +.++.+||+|||++
T Consensus 99 ~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a 174 (285)
T 3is5_A 99 METCEGGELLERIVSAQAR-GKALSEGYVAELMKQMMNALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLA 174 (285)
T ss_dssp ECCCSCCBHHHHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEESSSSTTCCEEECCCCCC
T ss_pred EEeCCCCcHHHHHHhhhhc-ccCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCCCHHHEEEecCCCCCCEEEEeeecc
Confidence 9999999999988654332 3679999999999999999999997 899999999999999 45678999999999
Q ss_pred eecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCccccc
Q 002238 747 RLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFH 826 (948)
Q Consensus 747 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 826 (948)
+...... ......||+.|+|||++. ..++.++||||||+++|||++|+.||......+...... .......
T Consensus 175 ~~~~~~~--~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~------~~~~~~~ 245 (285)
T 3is5_A 175 ELFKSDE--HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKAT------YKEPNYA 245 (285)
T ss_dssp CC------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH------HCCCCCC
T ss_pred eecCCcc--cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhc------cCCcccc
Confidence 8654432 234457999999999875 578999999999999999999999998765433221111 1011000
Q ss_pred cccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 827 KAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
. ........+.+++.+|++.||++||++.|+++
T Consensus 246 ~----------~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 246 V----------ECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp C------------CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred c----------ccCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 00112245889999999999999999999976
No 120
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=1.1e-38 Score=351.39 Aligned_cols=254 Identities=24% Similarity=0.342 Sum_probs=208.6
Q ss_pred hhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCCh----hhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCc
Q 002238 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISG----KGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNE 665 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 665 (948)
+.++|++.+.||+|+||.||+|..+ +|+.||||++....... ...+.+.+|+.++++++||||+++++++.+++.
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 89 (321)
T 2a2a_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTD 89 (321)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred hhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE
Confidence 3567999999999999999999875 68999999997653322 236789999999999999999999999999999
Q ss_pred eEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCC----CeEEe
Q 002238 666 KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM----RAKVA 741 (948)
Q Consensus 666 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~----~~kl~ 741 (948)
.++||||+++++|.+++.. ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++ .+||+
T Consensus 90 ~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~lH~---~~ivH~dikp~NIl~~~~~~~~~~~kl~ 161 (321)
T 2a2a_A 90 VVLILELVSGGELFDFLAQ-----KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLI 161 (321)
T ss_dssp EEEEECCCCSCBHHHHHHT-----CSCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEEC
T ss_pred EEEEEEcCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChHHEEEecCCCCcCCEEEc
Confidence 9999999999999998843 3568999999999999999999997 8999999999999999887 79999
Q ss_pred ecCCceecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcC
Q 002238 742 DFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLS 821 (948)
Q Consensus 742 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 821 (948)
|||+++...... ......||+.|+|||++.+..++.++||||||+++|||++|+.||......+.... +...
T Consensus 162 Dfg~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~------i~~~ 233 (321)
T 2a2a_A 162 DFGLAHEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN------ITSV 233 (321)
T ss_dssp CCTTCEECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHH------HHTT
T ss_pred cCccceecCccc--cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHH------HHhc
Confidence 999998765433 23345699999999999999999999999999999999999999987654332111 1111
Q ss_pred ccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 822 KDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
...+.. .........+.+++.+|++.||++||++.|+++
T Consensus 234 ~~~~~~---------~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 234 SYDFDE---------EFFSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp CCCCCH---------HHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred ccccCh---------hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 111100 001122345889999999999999999999987
No 121
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=8.5e-39 Score=354.91 Aligned_cols=251 Identities=22% Similarity=0.340 Sum_probs=201.2
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcC-ChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCceEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKLL 668 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~l 668 (948)
.++|++.+.||+|+||.||+|+.+ +++.||||++.+... .....+.+.+|+.++.++ +||||+++++++.+.+..++
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 357899999999999999999875 689999999986543 334466788999999988 89999999999999999999
Q ss_pred EEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCcee
Q 002238 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 748 (948)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~ 748 (948)
||||+++|+|.+++... ..+++..++.++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 88 v~e~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~ 159 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE 159 (345)
T ss_dssp EECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCGGGCBC
T ss_pred EEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEEecccccc
Confidence 99999999999988531 468999999999999999999997 8999999999999999999999999999985
Q ss_pred cCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhh---hHHHHHHHhhcCcccc
Q 002238 749 APEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESM---HLVTWFRRIHLSKDSF 825 (948)
Q Consensus 749 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~ 825 (948)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......... ........+......
T Consensus 160 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~- 237 (345)
T 3a8x_A 160 GLRPG-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR- 237 (345)
T ss_dssp SCCTT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCC-
T ss_pred ccCCC-CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCC-
Confidence 43322 2344567999999999999999999999999999999999999999753221100 000011111111111
Q ss_pred ccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCCh
Q 002238 826 HKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDM 864 (948)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~ 864 (948)
++ .....++.+++.+|++.||.+||++
T Consensus 238 -------~p-----~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 238 -------IP-----RSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp -------CC-----TTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred -------CC-----CCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 11 1122458899999999999999996
No 122
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=3.3e-39 Score=354.03 Aligned_cols=257 Identities=23% Similarity=0.354 Sum_probs=198.2
Q ss_pred hhcCCcccceecccCceEEEEEEE-cCCcEEEEEEeecCcCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCce--
Q 002238 591 VTNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVIS-GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEK-- 666 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~-- 666 (948)
+.++|++.+.||+|+||.||+|+. .+++.||||++...... ......+.+|++++++++||||+++++++......
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 89 (311)
T 3ork_A 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP 89 (311)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEE
T ss_pred ecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCc
Confidence 357899999999999999999986 47899999999765332 34456789999999999999999999998765543
Q ss_pred --EEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecC
Q 002238 667 --LLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 744 (948)
Q Consensus 667 --~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfG 744 (948)
++||||+++|+|.+++.. ...+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 90 ~~~lv~e~~~g~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg 161 (311)
T 3ork_A 90 LPYIVMEYVDGVTLRDIVHT-----EGPMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFG 161 (311)
T ss_dssp EEEEEEECCCEEEHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEETTSCEEECCCS
T ss_pred ccEEEEecCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEcCCCCEEEeecc
Confidence 999999999999999854 1468999999999999999999997 899999999999999999999999999
Q ss_pred CceecCCCCC--ceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCc
Q 002238 745 LVRLAPEGKG--SIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSK 822 (948)
Q Consensus 745 la~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 822 (948)
+++....... .......||+.|+|||++.+..++.++||||||+++|||++|+.||......+.... .....
T Consensus 162 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~------~~~~~ 235 (311)
T 3ork_A 162 IARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ------HVRED 235 (311)
T ss_dssp CC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH------HHHCC
T ss_pred CcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHH------HhcCC
Confidence 9986544322 122345699999999999999999999999999999999999999987654332111 11000
Q ss_pred cccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 823 DSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
.... .........++.+++.+|++.||++||+..+++..
T Consensus 236 ~~~~---------~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~ 274 (311)
T 3ork_A 236 PIPP---------SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRA 274 (311)
T ss_dssp CCCH---------HHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred CCCc---------ccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHH
Confidence 0000 00111123468899999999999999977766543
No 123
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-38 Score=352.31 Aligned_cols=260 Identities=25% Similarity=0.454 Sum_probs=205.3
Q ss_pred hcCCcccceecccCceEEEEEEEcC-----CcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCce
Q 002238 592 TNNFSEENILGRGGFGTVYKGELHD-----GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEK 666 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~~-----g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 666 (948)
.++|+..+.||+|+||.||+|..+. +..||||+++... .......+.+|++++++++||||+++++++.+.+..
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 121 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY-TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPM 121 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSE
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCc
Confidence 3578888999999999999998652 2359999987542 445567899999999999999999999999999999
Q ss_pred EEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCc
Q 002238 667 LLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLV 746 (948)
Q Consensus 667 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla 746 (948)
++||||+++|+|.+++.. ....+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 122 ~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~ 194 (333)
T 1mqb_A 122 MIITEYMENGALDKFLRE----KDGEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLS 194 (333)
T ss_dssp EEEEECCTTEEHHHHHHH----TTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC-
T ss_pred EEEEeCCCCCcHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChheEEECCCCcEEECCCCcc
Confidence 999999999999999853 23578999999999999999999997 79999999999999999999999999999
Q ss_pred eecCCCCCc--eeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHhhcCcc
Q 002238 747 RLAPEGKGS--IETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDESQPEESMHLVTWFRRIHLSKD 823 (948)
Q Consensus 747 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 823 (948)
+........ ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||......+....+ .. ..
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~------~~-~~ 267 (333)
T 1mqb_A 195 RVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAI------ND-GF 267 (333)
T ss_dssp ----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH------HT-TC
T ss_pred hhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHH------HC-CC
Confidence 865443211 1223346889999999999999999999999999999999 99999876543321111 11 00
Q ss_pred ccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhh
Q 002238 824 SFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVEL 877 (948)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~ 877 (948)
.. .. ....+..+.+++.+||+.+|++||++.++++.|+++...
T Consensus 268 ~~------~~-----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 310 (333)
T 1mqb_A 268 RL------PT-----PMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 310 (333)
T ss_dssp CC------CC-----CTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred cC------CC-----cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 00 00 012234688999999999999999999999999998753
No 124
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=7.3e-39 Score=347.80 Aligned_cols=259 Identities=24% Similarity=0.356 Sum_probs=208.1
Q ss_pred hcCCcccc-eecccCceEEEEEEEc---CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceE
Q 002238 592 TNNFSEEN-ILGRGGFGTVYKGELH---DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKL 667 (948)
Q Consensus 592 ~~~~~~~~-~lg~G~fg~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 667 (948)
.++|++.+ .||+|+||.||+|.+. +++.||||++..........+++.+|+++++.++||||+++++++ +.+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 45788877 9999999999999642 468899999976544445567899999999999999999999999 667789
Q ss_pred EEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCce
Q 002238 668 LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 747 (948)
Q Consensus 668 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~ 747 (948)
+||||+++++|.+++.. ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 94 lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 165 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQ-----NRHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSK 165 (291)
T ss_dssp EEEECCTTEEHHHHHHH-----CTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred EEEEeCCCCCHHHHHHh-----CcCCCHHHHHHHHHHHHHHHHHHHh---CCeEcCCCCcceEEEeCCCcEEEccCCcce
Confidence 99999999999999853 2468999999999999999999997 899999999999999999999999999998
Q ss_pred ecCCCCCcee--eeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHhhcCccc
Q 002238 748 LAPEGKGSIE--TRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDESQPEESMHLVTWFRRIHLSKDS 824 (948)
Q Consensus 748 ~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 824 (948)
.......... ....+|+.|+|||++.+..++.++||||||+++|||++ |+.||......+....+ .. ..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~---~~-----~~ 237 (291)
T 1xbb_A 166 ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML---EK-----GE 237 (291)
T ss_dssp ECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH---HT-----TC
T ss_pred eeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH---Hc-----CC
Confidence 7655433222 22346789999999999899999999999999999999 99999876654322111 11 00
Q ss_pred cccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhh
Q 002238 825 FHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVEL 877 (948)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~ 877 (948)
.+.. ....+..+.+++.+|++.||.+||++.++++.|+.+...
T Consensus 238 -----~~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 280 (291)
T 1xbb_A 238 -----RMGC-----PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 280 (291)
T ss_dssp -----CCCC-----CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred -----CCCC-----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 0001 112234688999999999999999999999999998653
No 125
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=3.1e-39 Score=364.93 Aligned_cols=253 Identities=21% Similarity=0.311 Sum_probs=200.4
Q ss_pred cCCcccceecccCceEEEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcC--CCceeeEEeEEEeCCceEEEE
Q 002238 593 NNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR--HRHLVALLGHCLDGNEKLLVF 670 (948)
Q Consensus 593 ~~~~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~~~~~lv~ 670 (948)
++|++.+.||+|+||.||+|...+++.||||++..........+.+.+|++++++++ ||||+++++++..++..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 469999999999999999999888999999999876555666788999999999996 599999999999999999999
Q ss_pred EecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceecC
Q 002238 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 750 (948)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~~ 750 (948)
| +.+++|.+++.. ...+++.++..++.||+.||+|||+ .+|+||||||+|||++ ++.+||+|||+++...
T Consensus 136 E-~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~ 205 (390)
T 2zmd_A 136 E-CGNIDLNSWLKK-----KKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 205 (390)
T ss_dssp E-CCSEEHHHHHHH-----CSSCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-
T ss_pred e-cCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEEE-CCeEEEEecCcccccc
Confidence 9 568899998853 2478899999999999999999997 8999999999999996 5899999999998664
Q ss_pred CCCCc-eeeeecccccccCceeccc-----------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHh
Q 002238 751 EGKGS-IETRIAGTFGYLAPEYAVT-----------GRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRI 818 (948)
Q Consensus 751 ~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 818 (948)
..... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ .....
T Consensus 206 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~-----~~~~~ 280 (390)
T 2zmd_A 206 PDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS-----KLHAI 280 (390)
T ss_dssp --------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH-----HHHHH
T ss_pred CCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHH-----HHHHH
Confidence 43322 2345679999999999865 4689999999999999999999999976543211 11111
Q ss_pred hcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 002238 819 HLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVL 871 (948)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L 871 (948)
...... ... ... ....+.+++.+|++.||.+||++.|+++.-
T Consensus 281 ~~~~~~------~~~--~~~---~~~~~~~li~~~L~~dP~~Rps~~ell~hp 322 (390)
T 2zmd_A 281 IDPNHE------IEF--PDI---PEKDLQDVLKCCLKRDPKQRISIPELLAHP 322 (390)
T ss_dssp HCTTSC------CCC--CCC---SCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred hCcccc------CCC--Ccc---chHHHHHHHHHHcccChhhCCCHHHHhhCc
Confidence 111100 000 000 123588999999999999999999998764
No 126
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=7.1e-39 Score=351.88 Aligned_cols=266 Identities=29% Similarity=0.438 Sum_probs=204.5
Q ss_pred hhcCCcccceecccCceEEEEEEEc----CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCc-
Q 002238 591 VTNNFSEENILGRGGFGTVYKGELH----DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNE- 665 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~- 665 (948)
..++|.+.+.||+|+||.||+|... +++.||||++..........+.+.+|+.++++++||||+++++++.+.+.
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 111 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ 111 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence 4578999999999999999999764 34589999998765556667889999999999999999999999987553
Q ss_pred ----eEEEEEecCCCChhHHHHhhh-hcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEE
Q 002238 666 ----KLLVFEYMPQGTLSRHIFNWA-EEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKV 740 (948)
Q Consensus 666 ----~~lv~e~~~~gsL~~~l~~~~-~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl 740 (948)
.++||||+++|+|.+++.... ......+++..++.++.|+++||+|||+ .+|+||||||+||+++.++.+||
T Consensus 112 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kl 188 (313)
T 3brb_A 112 GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSN---RNFLHRDLAARNCMLRDDMTVCV 188 (313)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCSGGGEEECTTSCEEE
T ss_pred CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEE
Confidence 499999999999999985422 2334679999999999999999999997 89999999999999999999999
Q ss_pred eecCCceecCCCCC-ceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHh
Q 002238 741 ADFGLVRLAPEGKG-SIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDESQPEESMHLVTWFRRI 818 (948)
Q Consensus 741 ~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 818 (948)
+|||+++....... .......+++.|+|||++.+..++.++||||||+++|||++ |..||......+..... .
T Consensus 189 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~---~-- 263 (313)
T 3brb_A 189 ADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYL---L-- 263 (313)
T ss_dssp CSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHH---H--
T ss_pred eecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHH---H--
Confidence 99999986543321 12233457889999999999999999999999999999999 89999876554322111 1
Q ss_pred hcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhh
Q 002238 819 HLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVEL 877 (948)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~ 877 (948)
... .+.. .......+.+++.+|++.+|.+||++.++++.|+++.+.
T Consensus 264 -~~~-------~~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~ 309 (313)
T 3brb_A 264 -HGH-------RLKQ-----PEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES 309 (313)
T ss_dssp -TTC-------CCCC-----BTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -cCC-------CCCC-----CccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 000 0000 112234688999999999999999999999999998764
No 127
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.6e-39 Score=360.62 Aligned_cols=265 Identities=24% Similarity=0.276 Sum_probs=204.8
Q ss_pred HHHhhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCc---CChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC
Q 002238 588 LRNVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGV---ISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG 663 (948)
Q Consensus 588 l~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 663 (948)
+..+.++|++.+.||+|+||.||+|... +++.||||++.... ......+.+.+|++++++++||||+++++++.++
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 3456788999999999999999999874 68899999987542 1344567899999999999999999999999999
Q ss_pred CceEEEEEecCCCChhHHHHhhhhc-----------------------------------CCCCCCHHHHHHHHHHHHHH
Q 002238 664 NEKLLVFEYMPQGTLSRHIFNWAEE-----------------------------------GLKPLEWNRRLTIALDVARG 708 (948)
Q Consensus 664 ~~~~lv~e~~~~gsL~~~l~~~~~~-----------------------------------~~~~l~~~~~~~i~~~i~~~ 708 (948)
+..++||||+++|+|.+++...... ....+++..++.++.|++.|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 9999999999999999988421111 01234677888999999999
Q ss_pred HHHHHhccCCCeeecCCCCccEEEcCCC--CeEEeecCCceecCCCC---CceeeeecccccccCceeccc--CCCCchh
Q 002238 709 VEYLHGLAHQSFIHRDLKPSNILLGDDM--RAKVADFGLVRLAPEGK---GSIETRIAGTFGYLAPEYAVT--GRVTTKV 781 (948)
Q Consensus 709 l~~LH~~~~~~ivHrDik~~Nill~~~~--~~kl~DfGla~~~~~~~---~~~~~~~~gt~~y~aPE~~~~--~~~~~~~ 781 (948)
|+|||+ .+|+||||||+||+++.++ .+||+|||+++...... ........||+.|+|||++.+ ..++.++
T Consensus 181 l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 257 (345)
T 3hko_A 181 LHYLHN---QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257 (345)
T ss_dssp HHHHHH---TTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred HHHHHH---CCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence 999997 7999999999999998776 89999999998653322 112345679999999999875 6789999
Q ss_pred hHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCC
Q 002238 782 DVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQR 861 (948)
Q Consensus 782 Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~R 861 (948)
||||||+++|||++|+.||......+....+ ......+. ..........+.+++.+|++.+|.+|
T Consensus 258 DiwslG~il~el~~g~~pf~~~~~~~~~~~~------~~~~~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~R 322 (345)
T 3hko_A 258 DAWSAGVLLHLLLMGAVPFPGVNDADTISQV------LNKKLCFE---------NPNYNVLSPLARDLLSNLLNRNVDER 322 (345)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH------HHCCCCTT---------SGGGGGSCHHHHHHHHHHSCSCTTTS
T ss_pred HHHHHHHHHHHHHHCCCCCCCCChHHHHHHH------HhcccccC---------CcccccCCHHHHHHHHHHcCCChhHC
Confidence 9999999999999999999876644322111 11010000 01111223468899999999999999
Q ss_pred CChHHHHHH
Q 002238 862 PDMGHAVNV 870 (948)
Q Consensus 862 Pt~~ev~~~ 870 (948)
|++.++++.
T Consensus 323 ps~~~~l~h 331 (345)
T 3hko_A 323 FDAMRALQH 331 (345)
T ss_dssp CCHHHHHHS
T ss_pred CCHHHHhcC
Confidence 999999873
No 128
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=7.7e-39 Score=369.37 Aligned_cols=265 Identities=23% Similarity=0.313 Sum_probs=201.4
Q ss_pred hhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC------
Q 002238 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG------ 663 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------ 663 (948)
..++|++.+.||+|+||.||+|... +|+.||||++..........+.+.+|+.+++.++||||+++++++...
T Consensus 60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 139 (464)
T 3ttj_A 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 139 (464)
T ss_dssp EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence 3578999999999999999999865 689999999987654556678899999999999999999999999754
Q ss_pred CceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeec
Q 002238 664 NEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADF 743 (948)
Q Consensus 664 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~Df 743 (948)
.+.++||||+++ +|.+.+. ..+++.++..++.|++.||+|||+ .+|+||||||+|||++.++.+||+||
T Consensus 140 ~~~~lv~E~~~~-~l~~~~~-------~~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDlkp~NIll~~~~~~kl~DF 208 (464)
T 3ttj_A 140 QDVYLVMELMDA-NLCQVIQ-------MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDF 208 (464)
T ss_dssp CEEEEEEECCSE-EHHHHHT-------SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCC
T ss_pred CeEEEEEeCCCC-CHHHHHh-------hcCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChHhEEEeCCCCEEEEEE
Confidence 356999999976 4655552 348899999999999999999997 79999999999999999999999999
Q ss_pred CCceecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCcc
Q 002238 744 GLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKD 823 (948)
Q Consensus 744 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 823 (948)
|+++...... ..+...||+.|+|||++.+..++.++||||+||++|||++|+.||.+....+....+ +........
T Consensus 209 G~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i--~~~lg~p~~ 284 (464)
T 3ttj_A 209 GLARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKV--IEQLGTPCP 284 (464)
T ss_dssp CCC-----CC--CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH--HHHHCSCCH
T ss_pred EeeeecCCCc--ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH--HHhcCCCCH
Confidence 9998654422 344567999999999999999999999999999999999999999876643322211 111100000
Q ss_pred -----------------------ccccccCccc-C-CccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 824 -----------------------SFHKAIDPTI-D-LNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 824 -----------------------~~~~~~~~~~-~-~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
.+...+...+ . ..........++.+++.+|++.||++|||++|++++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 285 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0001111100 0 001111224578999999999999999999999874
No 129
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=6.2e-39 Score=358.74 Aligned_cols=253 Identities=23% Similarity=0.301 Sum_probs=194.6
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 670 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 670 (948)
.++|++.+.||+|+||.||+|+.+ +++.||||++.... ...+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 95 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA---AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIM 95 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST---TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc---cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEE
Confidence 468999999999999999999876 78999999997642 22367889999999999999999999999999999999
Q ss_pred EecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCC--eEEeecCCcee
Q 002238 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR--AKVADFGLVRL 748 (948)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~--~kl~DfGla~~ 748 (948)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+|||+++.
T Consensus 96 e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~ql~~~L~~LH~---~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~ 167 (361)
T 3uc3_A 96 EYASGGELYERICN-----AGRFSEDEARFFFQQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKS 167 (361)
T ss_dssp ECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCSCCCCGGGEEECSSSSCCEEECCCCCC--
T ss_pred EeCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCceEEEeecCcccc
Confidence 99999999998853 1468999999999999999999997 89999999999999987765 99999999874
Q ss_pred cCCCCCceeeeecccccccCceecccCCCCch-hhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCcccccc
Q 002238 749 APEGKGSIETRIAGTFGYLAPEYAVTGRVTTK-VDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHK 827 (948)
Q Consensus 749 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 827 (948)
..... ......||+.|+|||++.+..++.+ +|||||||++|||++|+.||......... .............+.
T Consensus 168 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~--~~~~~~~~~~~~~~~- 242 (361)
T 3uc3_A 168 SVLHS--QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDY--RKTIQRILSVKYSIP- 242 (361)
T ss_dssp ---------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCH--HHHHHHHHTTCCCCC-
T ss_pred ccccC--CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHH--HHHHHHHhcCCCCCC-
Confidence 33222 2334579999999999988887665 89999999999999999999875432221 111222211111110
Q ss_pred ccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 828 AIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
.. ......+.+++.+|++.||.+|||+.|++++
T Consensus 243 ---~~-------~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 243 ---DD-------IRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp ---TT-------SCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred ---Cc-------CCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 00 0112458899999999999999999999886
No 130
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=6.4e-39 Score=351.33 Aligned_cols=268 Identities=25% Similarity=0.358 Sum_probs=202.3
Q ss_pred hhcCCcccceecccCceEEEEEEE-cCCcEEEEEEeecCcCC---hhhHHHHHHHHHHHHhcC---CCceeeEEeEEEeC
Q 002238 591 VTNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVIS---GKGLTEFKSEIAVLTKVR---HRHLVALLGHCLDG 663 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~ 663 (948)
+.++|++.+.||+|+||.||+|+. .+|+.||||++...... ......+.+|+++++.++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 467999999999999999999986 47899999998753211 122356778888877774 99999999999876
Q ss_pred C-----ceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCe
Q 002238 664 N-----EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRA 738 (948)
Q Consensus 664 ~-----~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~ 738 (948)
. ..++||||++ |+|.+++.. .....+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~ 159 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDK---APPPGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGTV 159 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHT---CCTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCTTTEEECTTSCE
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhh---ccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCE
Confidence 5 4799999996 599998853 222458999999999999999999997 899999999999999999999
Q ss_pred EEeecCCceecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHh
Q 002238 739 KVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRI 818 (948)
Q Consensus 739 kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 818 (948)
||+|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+....+. ...
T Consensus 160 kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~--~~~ 235 (308)
T 3g33_A 160 KLADFGLARIYSYQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIF--DLI 235 (308)
T ss_dssp EECSCSCTTTSTTCC--CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHH--HHH
T ss_pred EEeeCccccccCCCc--ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH--HHh
Confidence 999999998654332 2345679999999999999999999999999999999999999998766544322221 111
Q ss_pred hcC-cccccccc-------Cccc--CCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 819 HLS-KDSFHKAI-------DPTI--DLNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 819 ~~~-~~~~~~~~-------~~~~--~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
... ...+.... .+.. ............+.+++.+|++.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 236 GLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp CCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 110 00010000 0000 000011123356889999999999999999999876
No 131
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.3e-39 Score=360.33 Aligned_cols=260 Identities=29% Similarity=0.453 Sum_probs=199.3
Q ss_pred CCcccceecccCceEEEEEEEc--CC--cEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEe-CCceEE
Q 002238 594 NFSEENILGRGGFGTVYKGELH--DG--TKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLD-GNEKLL 668 (948)
Q Consensus 594 ~~~~~~~lg~G~fg~Vy~~~~~--~g--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~~l 668 (948)
.|+..+.||+|+||.||+|.+. ++ ..||||.++.. ......+++.+|+.++++++||||+++++++.+ ++..++
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~l 168 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 168 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSC-SCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEE
Confidence 4677889999999999999864 22 36899988653 244557889999999999999999999998765 457899
Q ss_pred EEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCcee
Q 002238 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 748 (948)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~ 748 (948)
||||+++|+|.+++.. ....+++.+++.++.||++||+|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 169 v~e~~~~g~L~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 241 (373)
T 3c1x_A 169 VLPYMKHGDLRNFIRN----ETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARD 241 (373)
T ss_dssp EEECCTTCBHHHHHHC----TTCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred EEECCCCCCHHHHHhh----cccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCccchheEEECCCCCEEEeecccccc
Confidence 9999999999999843 33568999999999999999999997 8999999999999999999999999999985
Q ss_pred cCCCCC---ceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHhhcCccc
Q 002238 749 APEGKG---SIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDESQPEESMHLVTWFRRIHLSKDS 824 (948)
Q Consensus 749 ~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 824 (948)
...... .......+|+.|+|||++.+..++.++||||||+++|||++ |.+||......+....+ . ...
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~---~---~~~-- 313 (373)
T 3c1x_A 242 MYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL---L---QGR-- 313 (373)
T ss_dssp ----------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHH---H---TTC--
T ss_pred ccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHH---H---cCC--
Confidence 543221 11234567889999999999999999999999999999999 77788765543322111 1 100
Q ss_pred cccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhhhC
Q 002238 825 FHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELWK 879 (948)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~~~ 879 (948)
....+ ...+..+.+++.+||+.+|++||++.++++.|+.+...+.
T Consensus 314 --~~~~p--------~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~ 358 (373)
T 3c1x_A 314 --RLLQP--------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 358 (373)
T ss_dssp --CCCCC--------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred --CCCCC--------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcc
Confidence 00011 1123458899999999999999999999999999987654
No 132
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=6e-39 Score=354.23 Aligned_cols=250 Identities=24% Similarity=0.410 Sum_probs=194.3
Q ss_pred hcCCcccceecccCceEEEEEEE----cCCcEEEEEEeecCcC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCc
Q 002238 592 TNNFSEENILGRGGFGTVYKGEL----HDGTKIAVKRMEAGVI--SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNE 665 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~----~~g~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 665 (948)
.++|++.+.||+|+||.||+|+. .+|+.||||+++.... .......+.+|+++++.++||||+++++++.+++.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46799999999999999999987 4789999999976532 22345668899999999999999999999999999
Q ss_pred eEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCC
Q 002238 666 KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGL 745 (948)
Q Consensus 666 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGl 745 (948)
.++||||+++|+|.+++.. ...+++.++..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 96 ~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 167 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLER-----EGIFMEDTACFYLAEISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGL 167 (327)
T ss_dssp EEEEEECCTTEEHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTSCEEECCCSC
T ss_pred EEEEEeCCCCCcHHHHHHh-----CCCCCHHHHHHHHHHHHHHHHHHHh---CCEEcccCCHHHeEECCCCcEEEEeCCc
Confidence 9999999999999998853 1468899999999999999999997 7999999999999999999999999999
Q ss_pred ceecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCcccc
Q 002238 746 VRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSF 825 (948)
Q Consensus 746 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 825 (948)
++...... .......||+.|+|||++.+..++.++||||||+++|||++|+.||......+.... +......+
T Consensus 168 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~------i~~~~~~~ 240 (327)
T 3a62_A 168 CKESIHDG-TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDK------ILKCKLNL 240 (327)
T ss_dssp C-----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH------HHHTCCCC
T ss_pred ccccccCC-ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHH------HHhCCCCC
Confidence 88543322 123345799999999999999999999999999999999999999987654332111 11111111
Q ss_pred ccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCC-----ChHHHHH
Q 002238 826 HKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRP-----DMGHAVN 869 (948)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RP-----t~~ev~~ 869 (948)
.+ .....+.+++.+|++.||.+|| ++.++++
T Consensus 241 ----p~---------~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 241 ----PP---------YLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp ----CT---------TSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred ----CC---------CCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 11 1224588999999999999999 5666655
No 133
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=4.9e-39 Score=354.69 Aligned_cols=265 Identities=26% Similarity=0.426 Sum_probs=213.7
Q ss_pred HhhcCCcccceecccCceEEEEEEEc------CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC
Q 002238 590 NVTNNFSEENILGRGGFGTVYKGELH------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG 663 (948)
Q Consensus 590 ~~~~~~~~~~~lg~G~fg~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 663 (948)
...++|++.+.||+|+||.||+|.+. +++.||||++.... .......+.+|+.++++++||||+++++++.++
T Consensus 22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 100 (322)
T 1p4o_A 22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 100 (322)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS-CHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSS
T ss_pred chhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc-CHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccC
Confidence 34678999999999999999999764 36889999987542 344566799999999999999999999999999
Q ss_pred CceEEEEEecCCCChhHHHHhhhh-----cCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCe
Q 002238 664 NEKLLVFEYMPQGTLSRHIFNWAE-----EGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRA 738 (948)
Q Consensus 664 ~~~~lv~e~~~~gsL~~~l~~~~~-----~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~ 738 (948)
+..++||||+++|+|.+++..... .....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+
T Consensus 101 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~NIli~~~~~~ 177 (322)
T 1p4o_A 101 QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTV 177 (322)
T ss_dssp SSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGGGEEECTTCCE
T ss_pred CccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCCccCCCccceEEEcCCCeE
Confidence 999999999999999999865321 112467899999999999999999997 799999999999999999999
Q ss_pred EEeecCCceecCCCCC-ceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHH
Q 002238 739 KVADFGLVRLAPEGKG-SIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDESQPEESMHLVTWFR 816 (948)
Q Consensus 739 kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~ 816 (948)
||+|||+++....... .......||+.|+|||++.+..++.++||||||+++|||++ |+.||......+....+
T Consensus 178 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~---- 253 (322)
T 1p4o_A 178 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV---- 253 (322)
T ss_dssp EECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHH----
T ss_pred EECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHH----
Confidence 9999999985433221 11223457899999999999999999999999999999999 89999876543321111
Q ss_pred HhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhh
Q 002238 817 RIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVE 876 (948)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~ 876 (948)
.. ..... .....+..+.+++.+|++.+|.+||++.++++.|++...
T Consensus 254 --~~--~~~~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 254 --ME--GGLLD----------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp --HT--TCCCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred --Hc--CCcCC----------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 11 00000 011223458899999999999999999999999988754
No 134
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=8.3e-39 Score=351.83 Aligned_cols=273 Identities=25% Similarity=0.384 Sum_probs=216.6
Q ss_pred HHHHHhhcCCcccceecccCceEEEEEEE------cCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhc-CCCceeeEEe
Q 002238 586 QVLRNVTNNFSEENILGRGGFGTVYKGEL------HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLG 658 (948)
Q Consensus 586 ~~l~~~~~~~~~~~~lg~G~fg~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~ 658 (948)
.......++|++.+.||+|+||.||+|++ .+++.||||++.... .....+.+.+|++++.++ +||||+++++
T Consensus 20 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 98 (316)
T 2xir_A 20 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLG 98 (316)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred cceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC-CcHHHHHHHHHHHHHHhcccCCCeeeEEE
Confidence 34444568899999999999999999974 246899999997642 444567899999999999 7999999999
Q ss_pred EEEeCC-ceEEEEEecCCCChhHHHHhhhhc-----------CCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCC
Q 002238 659 HCLDGN-EKLLVFEYMPQGTLSRHIFNWAEE-----------GLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLK 726 (948)
Q Consensus 659 ~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik 726 (948)
++...+ ..++||||+++|+|.+++...... ....+++..++.++.|++.||+|||+ .+|+|||||
T Consensus 99 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dik 175 (316)
T 2xir_A 99 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLA 175 (316)
T ss_dssp EECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHH---TTCCCSCCS
T ss_pred EEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHh---CCcccccCc
Confidence 988755 489999999999999998642211 01238999999999999999999997 899999999
Q ss_pred CccEEEcCCCCeEEeecCCceecCCCCC-ceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q 002238 727 PSNILLGDDMRAKVADFGLVRLAPEGKG-SIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDESQ 804 (948)
Q Consensus 727 ~~Nill~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~ 804 (948)
|+||+++.++.+||+|||+++....... .......||+.|+|||++.+..++.++||||||+++|||++ |+.||....
T Consensus 176 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~ 255 (316)
T 2xir_A 176 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 255 (316)
T ss_dssp GGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred cceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccc
Confidence 9999999999999999999986544332 22334568999999999999999999999999999999998 999998765
Q ss_pred chhhhhHHHHHHHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhhhC
Q 002238 805 PEESMHLVTWFRRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELWK 879 (948)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~~~ 879 (948)
..+.. ........ . .... ......+.+++.+|++.||.+||++.++++.|+.+.+...
T Consensus 256 ~~~~~--~~~~~~~~--~--------~~~~-----~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 313 (316)
T 2xir_A 256 IDEEF--CRRLKEGT--R--------MRAP-----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313 (316)
T ss_dssp CSHHH--HHHHHHTC--C--------CCCC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred hhHHH--HHHhccCc--c--------CCCC-----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 33221 11111100 0 0000 1122458899999999999999999999999999987654
No 135
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=5.1e-39 Score=357.10 Aligned_cols=250 Identities=23% Similarity=0.331 Sum_probs=204.7
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcC-ChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCceEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKLL 668 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~l 668 (948)
.++|++.+.||+|+||.||+|+.+ +|+.||||++++... .....+.+..|..++..+ +||||+++++++.+.+..|+
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 98 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 98 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence 578999999999999999999876 578999999976422 223456788999999988 89999999999999999999
Q ss_pred EEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCcee
Q 002238 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 748 (948)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~ 748 (948)
||||+++|+|.+++... ..+++..++.++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 99 v~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~ 170 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKE 170 (353)
T ss_dssp EEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEEcCCCcEEEEeCCcccc
Confidence 99999999999998541 468999999999999999999997 8999999999999999999999999999985
Q ss_pred cCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCccccccc
Q 002238 749 APEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHKA 828 (948)
Q Consensus 749 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 828 (948)
..... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||......+.... +......+.
T Consensus 171 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~------i~~~~~~~p-- 241 (353)
T 2i0e_A 171 NIWDG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQS------IMEHNVAYP-- 241 (353)
T ss_dssp CCCTT-CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH------HHHCCCCCC--
T ss_pred cccCC-cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHH------HHhCCCCCC--
Confidence 43322 234456799999999999999999999999999999999999999987654332211 111111111
Q ss_pred cCcccCCccchHHHHHHHHHHHHHhcccCCCCCCCh-----HHHHH
Q 002238 829 IDPTIDLNEGILASISTVAELAGHCCAREPYQRPDM-----GHAVN 869 (948)
Q Consensus 829 ~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~-----~ev~~ 869 (948)
. ....++.+++.+|++.||.+||++ .++++
T Consensus 242 --~---------~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 242 --K---------SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp --T---------TSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred --C---------CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 1 122458899999999999999964 55554
No 136
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.9e-39 Score=360.27 Aligned_cols=275 Identities=23% Similarity=0.388 Sum_probs=200.5
Q ss_pred hcCCcccceecccCceEEEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHH--HHhcCCCceeeEEeEEEe-----CC
Q 002238 592 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAV--LTKVRHRHLVALLGHCLD-----GN 664 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~--l~~l~H~niv~l~~~~~~-----~~ 664 (948)
.++|++.+.||+|+||.||+|+. +++.||||++... ....+..|.++ +..++||||+++++++.. ..
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 85 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA-----NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRM 85 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG-----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc-----chhhHHHHHHHHHHHhccCcchhhheecccccccCCCc
Confidence 46899999999999999999987 4899999998643 22344445444 455899999999986543 22
Q ss_pred ceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcc------CCCeeecCCCCccEEEcCCCCe
Q 002238 665 EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLA------HQSFIHRDLKPSNILLGDDMRA 738 (948)
Q Consensus 665 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------~~~ivHrDik~~Nill~~~~~~ 738 (948)
..++||||+++|+|.+++.. ...++..+++++.|++.||+|||+.. +.+|+||||||+|||++.++.+
T Consensus 86 ~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 159 (336)
T 3g2f_A 86 EYLLVMEYYPNGSLXKYLSL------HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTC 159 (336)
T ss_dssp EEEEEECCCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCE
T ss_pred eEEEEEecCCCCcHHHHHhh------cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcE
Confidence 56899999999999999843 34589999999999999999999721 1199999999999999999999
Q ss_pred EEeecCCceecCCCCC-------ceeeeecccccccCceeccc-------CCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 002238 739 KVADFGLVRLAPEGKG-------SIETRIAGTFGYLAPEYAVT-------GRVTTKVDVFSFGVILMELITGRKALDESQ 804 (948)
Q Consensus 739 kl~DfGla~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~ 804 (948)
||+|||+++....... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 160 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~ 239 (336)
T 3g2f_A 160 VISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGE 239 (336)
T ss_dssp EECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTS
T ss_pred EEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCcc
Confidence 9999999986643221 12234569999999999976 456789999999999999999977765432
Q ss_pred chhhhh-H----------HHHHHHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHh
Q 002238 805 PEESMH-L----------VTWFRRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSS 873 (948)
Q Consensus 805 ~~~~~~-~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~ 873 (948)
...... . ......... .......+.... .........+.+++.+||+.||++|||++|+++.|++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ 315 (336)
T 3g2f_A 240 SVPEYQMAFQTEVGNHPTFEDMQVLVS-REKQRPKFPEAW---KENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAE 315 (336)
T ss_dssp CCCCCCCTTHHHHCSSCCHHHHHHHHT-TSCCCCCCCTTC---CCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred chhHHHHhhhcccCCCchHHHHHhhhc-ccccCCCCCccc---ccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHH
Confidence 211100 0 000000000 000011111111 1122345579999999999999999999999999999
Q ss_pred hhhhhCCCC
Q 002238 874 LVELWKPTD 882 (948)
Q Consensus 874 ~~~~~~~~~ 882 (948)
+...|....
T Consensus 316 ll~~~~~~~ 324 (336)
T 3g2f_A 316 LMMIWERNK 324 (336)
T ss_dssp HHHCCCC--
T ss_pred HHHHHHhcc
Confidence 998876543
No 137
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=6.7e-39 Score=345.47 Aligned_cols=252 Identities=25% Similarity=0.355 Sum_probs=205.9
Q ss_pred hhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEE
Q 002238 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 669 (948)
+.++|++.+.||+|+||.||+|..+ ++..||+|++.... ....+.+.+|++++++++||||+++++++.+++..++|
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYF--VEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLV 84 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG--CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhc--cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEE
Confidence 4578999999999999999999875 57899999987642 33467899999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEE---cCCCCeEEeecCCc
Q 002238 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGLV 746 (948)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill---~~~~~~kl~DfGla 746 (948)
|||+++++|.+++.. ...+++.+++.++.|++.||+|||+ .+|+||||||+||++ +.++.++|+|||++
T Consensus 85 ~e~~~~~~L~~~~~~-----~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~ 156 (277)
T 3f3z_A 85 MELCTGGELFERVVH-----KRVFRESDAARIMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLA 156 (277)
T ss_dssp EECCCSCBHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred EeccCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEecCCCCCcEEEEecccc
Confidence 999999999988854 1468999999999999999999997 899999999999999 78889999999999
Q ss_pred eecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCccccc
Q 002238 747 RLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFH 826 (948)
Q Consensus 747 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 826 (948)
....... ......||+.|+|||++.+ .++.++||||||+++|||++|+.||......+....+ ........
T Consensus 157 ~~~~~~~--~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~------~~~~~~~~ 227 (277)
T 3f3z_A 157 ARFKPGK--MMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKI------REGTFTFP 227 (277)
T ss_dssp EECCTTS--CBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH------HHCCCCCC
T ss_pred eeccCcc--chhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHH------HhCCCCCC
Confidence 8765433 2344569999999998865 4899999999999999999999999876543321111 11010000
Q ss_pred cccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 827 KAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
..........+.+++.+|++.||++||++.++++.
T Consensus 228 ---------~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 228 ---------EKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp ---------HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred ---------chhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 01111223568899999999999999999999763
No 138
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=8.1e-39 Score=350.50 Aligned_cols=262 Identities=21% Similarity=0.285 Sum_probs=201.7
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS-GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 669 (948)
.++|++.+.||+|+||.||+|... +++.||||++...... ....+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 578999999999999999999875 6899999998764322 33357899999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceec
Q 002238 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (948)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~ 749 (948)
|||+++++|.+++... ..+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++...
T Consensus 113 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 184 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQ-----GPLAPPRAVAIVRQIGSALDAAHA---AGATHRDVKPENILVSADDFAYLVDFGIASAT 184 (309)
T ss_dssp EECCCCEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSCCC----
T ss_pred EEecCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CcCCcCCCChHHEEEcCCCCEEEecCccCccc
Confidence 9999999999998541 468999999999999999999997 89999999999999999999999999999866
Q ss_pred CCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCcccccccc
Q 002238 750 PEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHKAI 829 (948)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 829 (948)
............||+.|+|||++.+..++.++||||||+++|||++|+.||....... ...... . ........
T Consensus 185 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~~~---~-~~~~~~~~ 257 (309)
T 2h34_A 185 TDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSV---MGAHIN---Q-AIPRPSTV 257 (309)
T ss_dssp ------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHH---HHHHHH---S-CCCCGGGT
T ss_pred cccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHH---HHHHhc---c-CCCCcccc
Confidence 5543333445679999999999999999999999999999999999999998654321 111111 0 10001111
Q ss_pred CcccCCccchHHHHHHHHHHHHHhcccCCCCCC-ChHHHHHHHHhhhhh
Q 002238 830 DPTIDLNEGILASISTVAELAGHCCAREPYQRP-DMGHAVNVLSSLVEL 877 (948)
Q Consensus 830 ~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RP-t~~ev~~~L~~~~~~ 877 (948)
.+ ..+.++.+++.+|++.||++|| +++++++.|+.....
T Consensus 258 ~~---------~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~ 297 (309)
T 2h34_A 258 RP---------GIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALAT 297 (309)
T ss_dssp ST---------TCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC-
T ss_pred CC---------CCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHh
Confidence 11 1223588999999999999999 999999999987643
No 139
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=9.5e-39 Score=343.87 Aligned_cols=249 Identities=25% Similarity=0.371 Sum_probs=182.5
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS-GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 669 (948)
.++|++.+.||+|+||.||+|... +|+.||||++...... ....+.+.+|+++++.++||||+++++++.+++..++|
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence 367999999999999999999864 7899999999765433 33356889999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceec
Q 002238 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (948)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~ 749 (948)
|||+ +++|.+.+.. ...+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 92 ~e~~-~~~l~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 162 (275)
T 2eue_A 92 IEYA-GNELFDYIVQ-----RDKMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIM 162 (275)
T ss_dssp EECC-CEEHHHHHHT-----SSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCSSCC---
T ss_pred ehhc-CCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCCeeccCChHhEEECCCCCEEEeecccceec
Confidence 9999 6788777733 2568999999999999999999997 89999999999999999999999999999865
Q ss_pred CCCCCceeeeecccccccCceecccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCccccccc
Q 002238 750 PEGKGSIETRIAGTFGYLAPEYAVTGRV-TTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHKA 828 (948)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 828 (948)
.... ......||+.|+|||++.+..+ +.++||||||+++|||++|+.||...........+ ......+.
T Consensus 163 ~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~------~~~~~~~~-- 232 (275)
T 2eue_A 163 TDGN--FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNI------SNGVYTLP-- 232 (275)
T ss_dssp --------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH------HHTCCCCC--
T ss_pred cCcc--cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHH------HhCCCCCC--
Confidence 4432 2334569999999999988765 78999999999999999999999876543221111 11111111
Q ss_pred cCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 829 IDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 829 ~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
. .....+.+++.+|++.||.+||++.|+++.
T Consensus 233 --~---------~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 233 --K---------FLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp --T---------TSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred --c---------cCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 1 122458899999999999999999999763
No 140
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=9e-39 Score=358.90 Aligned_cols=256 Identities=18% Similarity=0.222 Sum_probs=209.4
Q ss_pred hcCCcccceecccCceEEEEEE------EcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcC---CCceeeEEeEEEe
Q 002238 592 TNNFSEENILGRGGFGTVYKGE------LHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR---HRHLVALLGHCLD 662 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~------~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~ 662 (948)
.++|.+.+.||+|+||.||+|. ..+++.||||++... ...++.+|+++++.++ |+||+++++++..
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~ 138 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA-----NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF 138 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC-----CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC-----ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence 4679999999999999999994 446899999998653 2457888888888886 9999999999999
Q ss_pred CCceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcC--------
Q 002238 663 GNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD-------- 734 (948)
Q Consensus 663 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~-------- 734 (948)
++..++||||+++|+|.+++..........+++..++.|+.||+.||+|||+ .+||||||||+|||++.
T Consensus 139 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~---~~ivHrDiKp~NIll~~~~~~~~~~ 215 (365)
T 3e7e_A 139 QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHD---CEIIHGDIKPDNFILGNGFLEQDDE 215 (365)
T ss_dssp SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECGGGTCC---
T ss_pred CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEecccccCcccc
Confidence 9999999999999999999976544445789999999999999999999997 89999999999999998
Q ss_pred ---CCCeEEeecCCceecCC-CCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhh
Q 002238 735 ---DMRAKVADFGLVRLAPE-GKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMH 810 (948)
Q Consensus 735 ---~~~~kl~DfGla~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~ 810 (948)
++.+||+|||+|+.... ..........||++|+|||++.+..++.++|||||||++|||+||+.||.......
T Consensus 216 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~--- 292 (365)
T 3e7e_A 216 DDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE--- 292 (365)
T ss_dssp ---CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE---
T ss_pred ccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc---
Confidence 89999999999985432 22334455679999999999999999999999999999999999999986432211
Q ss_pred HHHHHHHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCC-CChHHHHHHHHhhhhhh
Q 002238 811 LVTWFRRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQR-PDMGHAVNVLSSLVELW 878 (948)
Q Consensus 811 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~R-Pt~~ev~~~L~~~~~~~ 878 (948)
......+... .....+.+++..|++.+|.+| |+++++.+.|++.....
T Consensus 293 ------------~~~~~~~~~~--------~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~ 341 (365)
T 3e7e_A 293 ------------CKPEGLFRRL--------PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQH 341 (365)
T ss_dssp ------------EEECSCCTTC--------SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHH
T ss_pred ------------eeechhcccc--------CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHh
Confidence 0011111110 113357789999999999998 68888999998887653
No 141
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=5.9e-39 Score=359.89 Aligned_cols=271 Identities=23% Similarity=0.290 Sum_probs=209.3
Q ss_pred eHHHHHHhhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcC-----CCceeeEE
Q 002238 584 SIQVLRNVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR-----HRHLVALL 657 (948)
Q Consensus 584 ~~~~l~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-----H~niv~l~ 657 (948)
++++...+.++|++.+.||+|+||.||+|+.. +++.||||++.. .......+..|+++++.++ ||||++++
T Consensus 26 ~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~ 102 (360)
T 3llt_A 26 SWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN---IKKYTRSAKIEADILKKIQNDDINNNNIVKYH 102 (360)
T ss_dssp CCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS---CHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEE
T ss_pred eeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc---chhhhhhhHHHHHHHHHhcccCCCCCCeeccc
Confidence 33444456789999999999999999999874 789999999864 3444567888999999996 99999999
Q ss_pred eEEEeCCceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcC---
Q 002238 658 GHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD--- 734 (948)
Q Consensus 658 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~--- 734 (948)
+++...+..++||||+ +++|.+++.. .....+++..+..++.||+.||+|||+ .+|+||||||+|||++.
T Consensus 103 ~~~~~~~~~~lv~e~~-~~~L~~~~~~---~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~ 175 (360)
T 3llt_A 103 GKFMYYDHMCLIFEPL-GPSLYEIITR---NNYNGFHIEDIKLYCIEILKALNYLRK---MSLTHTDLKPENILLDDPYF 175 (360)
T ss_dssp EEEEETTEEEEEECCC-CCBHHHHHHH---TTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCTTC
T ss_pred ceeeECCeeEEEEcCC-CCCHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCcccEEEccccc
Confidence 9999999999999999 9999999854 223468999999999999999999997 89999999999999975
Q ss_pred ----------------------CCCeEEeecCCceecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHH
Q 002238 735 ----------------------DMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILME 792 (948)
Q Consensus 735 ----------------------~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~e 792 (948)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++||
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 251 (360)
T 3llt_A 176 EKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAE 251 (360)
T ss_dssp CEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHH
T ss_pred cccccchhcccccccccccccCCCCEEEEeccCceecCCC----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHH
Confidence 789999999999865442 234578999999999999999999999999999999
Q ss_pred HHhCCCCCCCCCchhhhhHHHHHHHhhcCcccc--------ccccC-----cccCCcc---------------chHHHHH
Q 002238 793 LITGRKALDESQPEESMHLVTWFRRIHLSKDSF--------HKAID-----PTIDLNE---------------GILASIS 844 (948)
Q Consensus 793 lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~-----~~~~~~~---------------~~~~~~~ 844 (948)
|++|+.||......+....+...... ...... ...++ ...+... .......
T Consensus 252 ll~g~~pf~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (360)
T 3llt_A 252 LYTGSLLFRTHEHMEHLAMMESIIQP-IPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHE 330 (360)
T ss_dssp HHHSSCSCCCSSHHHHHHHHHHHTCC-CCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCH
T ss_pred HHHCCCCCCCCcHHHHHHHHHHhcCC-CCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHH
Confidence 99999999876654332222111000 000000 00000 0000000 0000114
Q ss_pred HHHHHHHHhcccCCCCCCChHHHHH
Q 002238 845 TVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 845 ~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
.+.+++.+|++.||++|||++|+++
T Consensus 331 ~l~~li~~~L~~dP~~Rpta~elL~ 355 (360)
T 3llt_A 331 LFCDFLYSILQIDPTLRPSPAELLK 355 (360)
T ss_dssp HHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHHhcCChhhCCCHHHHhc
Confidence 5789999999999999999999875
No 142
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1e-38 Score=380.72 Aligned_cols=261 Identities=22% Similarity=0.370 Sum_probs=206.6
Q ss_pred CCcccc-eecccCceEEEEEEEc---CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEE
Q 002238 594 NFSEEN-ILGRGGFGTVYKGELH---DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (948)
Q Consensus 594 ~~~~~~-~lg~G~fg~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 669 (948)
++.+.+ .||+|+||.||+|.++ ++..||||+++... .....++|.+|++++++++|||||++++++.+ +..++|
T Consensus 336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv 413 (613)
T 2ozo_A 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLV 413 (613)
T ss_dssp SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCC-SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEE
T ss_pred ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEE
Confidence 344444 7999999999999864 46679999997642 34456889999999999999999999999976 568999
Q ss_pred EEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceec
Q 002238 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (948)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~ 749 (948)
|||+++|+|.+++.. ....+++..++.++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 414 ~E~~~~g~L~~~l~~----~~~~l~~~~~~~i~~qi~~~L~~LH~---~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~ 486 (613)
T 2ozo_A 414 MEMAGGGPLHKFLVG----KREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRNLAARNVLLVNRHYAKISDFGLSKAL 486 (613)
T ss_dssp EECCTTCBHHHHHTT----CTTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCSTTTTC
T ss_pred EEeCCCCcHHHHHhh----ccCCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCcCCHHHEEEcCCCcEEEeeccCcccc
Confidence 999999999998843 23579999999999999999999997 89999999999999999999999999999865
Q ss_pred CCCCCce--eeeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHhhcCccccc
Q 002238 750 PEGKGSI--ETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDESQPEESMHLVTWFRRIHLSKDSFH 826 (948)
Q Consensus 750 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 826 (948)
....... .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+....+. . +. .
T Consensus 487 ~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~------~--~~-~ 557 (613)
T 2ozo_A 487 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE------Q--GK-R 557 (613)
T ss_dssp C--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHH------T--TC-C
T ss_pred cCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH------c--CC-C
Confidence 4332211 122346789999999999999999999999999999998 999998866544322111 1 00 0
Q ss_pred cccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhhhCCC
Q 002238 827 KAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELWKPT 881 (948)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~~~~~ 881 (948)
+. .....+.++.+++.+||+.+|++||++.+|++.|+.+.......
T Consensus 558 ------~~---~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~~ 603 (613)
T 2ozo_A 558 ------ME---CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASK 603 (613)
T ss_dssp ------CC---CCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSCS
T ss_pred ------CC---CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhccc
Confidence 00 01123356889999999999999999999999999987665543
No 143
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1e-38 Score=354.83 Aligned_cols=251 Identities=26% Similarity=0.402 Sum_probs=203.5
Q ss_pred hcCCcccceecccCceEEEEEEE-cCCcEEEEEEeecCcCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVIS-GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 669 (948)
.+.|+..+.||+|+||.||+|+. .+|+.||||++...... ....+.+.+|++++++++||||+++++++.+++..++|
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 35688999999999999999986 47899999999764322 33456799999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceec
Q 002238 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (948)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~ 749 (948)
|||+. |+|.+.+.. ....+++.++..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 133 ~e~~~-g~l~~~l~~----~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 204 (348)
T 1u5q_A 133 MEYCL-GSASDLLEV----HKKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIM 204 (348)
T ss_dssp EECCS-EEHHHHHHH----HTSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEECCCTTCBSS
T ss_pred EecCC-CCHHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEeeccCceec
Confidence 99997 688877743 23578999999999999999999997 79999999999999999999999999999865
Q ss_pred CCCCCceeeeecccccccCceecc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCccccc
Q 002238 750 PEGKGSIETRIAGTFGYLAPEYAV---TGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFH 826 (948)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 826 (948)
... ....||+.|+|||++. ...++.++|||||||++|||++|+.||.......... ......
T Consensus 205 ~~~-----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~------~~~~~~---- 269 (348)
T 1u5q_A 205 APA-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY------HIAQNE---- 269 (348)
T ss_dssp SSB-----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH------HHHHSC----
T ss_pred CCC-----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH------HHHhcC----
Confidence 432 2356999999999984 5678999999999999999999999998765433211 111100
Q ss_pred cccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHH
Q 002238 827 KAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLS 872 (948)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~ 872 (948)
.+... .......+.+++.+|++.||++||++.++++.-.
T Consensus 270 ---~~~~~----~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~ 308 (348)
T 1u5q_A 270 ---SPALQ----SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 308 (348)
T ss_dssp ---CCCCC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHH
T ss_pred ---CCCCC----CCCCCHHHHHHHHHHcccChhhCcCHHHHhhChh
Confidence 01111 0112245889999999999999999999987543
No 144
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=5.8e-39 Score=348.29 Aligned_cols=251 Identities=23% Similarity=0.417 Sum_probs=202.5
Q ss_pred hcCCcccceecccCceEEEEEEEc-CC-------cEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DG-------TKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG 663 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g-------~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 663 (948)
.++|++.+.||+|+||.||+|... ++ ..||+|++... .....+.+.+|++++++++||||+++++++.++
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 84 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA--HRNYSESFFEAASMMSKLSHKHLVLNYGVCVCG 84 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGG--GGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCT
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccc--cHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeC
Confidence 467899999999999999999865 33 47999998654 345567899999999999999999999999999
Q ss_pred CceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCC------
Q 002238 664 NEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR------ 737 (948)
Q Consensus 664 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~------ 737 (948)
+..++||||+++|+|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.
T Consensus 85 ~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~ 157 (289)
T 4fvq_A 85 DENILVQEFVKFGSLDTYLKK----NKNCINILWKLEVAKQLAAAMHFLEE---NTLIHGNVCAKNILLIREEDRKTGNP 157 (289)
T ss_dssp TCCEEEEECCTTCBHHHHHHH----TGGGCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEEECCBGGGTBC
T ss_pred CCCEEEEECCCCCCHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHhh---CCeECCCcCcceEEEecCCccccccc
Confidence 999999999999999999854 22348999999999999999999997 89999999999999998887
Q ss_pred --eEEeecCCceecCCCCCceeeeecccccccCceeccc-CCCCchhhHHHHHHHHHHHHhCCC-CCCCCCchhhhhHHH
Q 002238 738 --AKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVT-GRVTTKVDVFSFGVILMELITGRK-ALDESQPEESMHLVT 813 (948)
Q Consensus 738 --~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~elltg~~-p~~~~~~~~~~~~~~ 813 (948)
+||+|||+++.... .....||+.|+|||++.+ ..++.++||||||+++|||++|.. |+......... .
T Consensus 158 ~~~kl~Dfg~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~---~ 229 (289)
T 4fvq_A 158 PFIKLSDPGISITVLP-----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKL---Q 229 (289)
T ss_dssp CEEEECCCCSCTTTSC-----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH---H
T ss_pred ceeeeccCcccccccC-----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHH---H
Confidence 99999999865432 233568999999999987 679999999999999999999655 44443322211 1
Q ss_pred HHHHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhh
Q 002238 814 WFRRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVE 876 (948)
Q Consensus 814 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~ 876 (948)
... ......... ..++.+++.+|++.||++||++.++++.|+++..
T Consensus 230 ~~~----~~~~~~~~~-------------~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~ 275 (289)
T 4fvq_A 230 FYE----DRHQLPAPK-------------AAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT 275 (289)
T ss_dssp HHH----TTCCCCCCS-------------SCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred Hhh----ccCCCCCCC-------------CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 111 011111111 1237799999999999999999999999999864
No 145
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=5.8e-39 Score=373.95 Aligned_cols=256 Identities=29% Similarity=0.438 Sum_probs=208.1
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 669 (948)
.++|+..+.||+|+||.||+|+.+ +|+.||||++..... .......+.+|+++++.++||||+++++++.+.+..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 467999999999999999999875 799999999976422 223456788999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceec
Q 002238 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (948)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~ 749 (948)
|||++||+|.+++.. .+...+++..++.++.||+.||+|||+ .+||||||||+|||++.++.+||+|||+++..
T Consensus 263 mEy~~gg~L~~~l~~---~~~~~l~e~~~~~i~~qIl~aL~yLH~---~gIvHrDLKPeNILld~~g~vKL~DFGla~~~ 336 (576)
T 2acx_A 263 LTLMNGGDLKFHIYH---MGQAGFPEARAVFYAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHV 336 (576)
T ss_dssp ECCCCSCBHHHHHHS---SSSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEcCCCCcHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCchheEEEeCCCCeEEEecccceec
Confidence 999999999998854 223458999999999999999999997 89999999999999999999999999999876
Q ss_pred CCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCcccccccc
Q 002238 750 PEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHKAI 829 (948)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 829 (948)
.... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||...........+ ...+......+
T Consensus 337 ~~~~--~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i--~~~i~~~~~~~---- 408 (576)
T 2acx_A 337 PEGQ--TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEV--ERLVKEVPEEY---- 408 (576)
T ss_dssp CTTC--CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHH--HHHHHHCCCCC----
T ss_pred ccCc--cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHH--HHHhhcccccC----
Confidence 5433 234457999999999999999999999999999999999999999875432211111 11111111111
Q ss_pred CcccCCccchHHHHHHHHHHHHHhcccCCCCCC-----ChHHHHHH
Q 002238 830 DPTIDLNEGILASISTVAELAGHCCAREPYQRP-----DMGHAVNV 870 (948)
Q Consensus 830 ~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RP-----t~~ev~~~ 870 (948)
.. ....++.+++.+|++.||.+|| +++||+++
T Consensus 409 p~---------~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 409 SE---------RFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp CT---------TSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred Cc---------cCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 11 1224588999999999999999 67887753
No 146
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.1e-38 Score=353.77 Aligned_cols=265 Identities=25% Similarity=0.411 Sum_probs=213.2
Q ss_pred hcCCcccceecccCceEEEEEEEcC-C-----cEEEEEEeecCcCChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCC
Q 002238 592 TNNFSEENILGRGGFGTVYKGELHD-G-----TKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGN 664 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~~-g-----~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~ 664 (948)
.++|+..+.||+|+||.||+|.... + ..||||++.... .....+.+.+|+++++++ +||||+++++++.+++
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 123 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA-HADEKEALMSELKIMSHLGQHENIVNLLGACTHGG 123 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc-ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence 5789999999999999999998642 2 479999987642 344567899999999999 8999999999999999
Q ss_pred ceEEEEEecCCCChhHHHHhhhhc---------CCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCC
Q 002238 665 EKLLVFEYMPQGTLSRHIFNWAEE---------GLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD 735 (948)
Q Consensus 665 ~~~lv~e~~~~gsL~~~l~~~~~~---------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~ 735 (948)
..++||||+++|+|.+++...... ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.+
T Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~ 200 (333)
T 2i1m_A 124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNG 200 (333)
T ss_dssp SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGCEEEGG
T ss_pred ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCcccceEEECCC
Confidence 999999999999999998653211 12468999999999999999999997 799999999999999999
Q ss_pred CCeEEeecCCceecCCCCC-ceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchhhhhHHH
Q 002238 736 MRAKVADFGLVRLAPEGKG-SIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDESQPEESMHLVT 813 (948)
Q Consensus 736 ~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~ 813 (948)
+.+||+|||+++....... .......||+.|+|||++.+..++.++||||||+++|||++ |..||.......... .
T Consensus 201 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~--~ 278 (333)
T 2i1m_A 201 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFY--K 278 (333)
T ss_dssp GEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHH--H
T ss_pred CeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHH--H
Confidence 9999999999985543322 22334567889999999999999999999999999999999 999998755432211 1
Q ss_pred HHHHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhh
Q 002238 814 WFRRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVEL 877 (948)
Q Consensus 814 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~ 877 (948)
..... .... .+ ...+..+.+++.+|++.||.+||++.++++.|+++...
T Consensus 279 ~~~~~------~~~~-~~--------~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 327 (333)
T 2i1m_A 279 LVKDG------YQMA-QP--------AFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 327 (333)
T ss_dssp HHHHT------CCCC-CC--------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHhcC------CCCC-CC--------CCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHh
Confidence 11110 0000 00 11134588999999999999999999999999988654
No 147
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.7e-39 Score=362.67 Aligned_cols=277 Identities=19% Similarity=0.247 Sum_probs=212.9
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC--ceEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGN--EKLL 668 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--~~~l 668 (948)
.++|++.+.||+|+||.||+|... +|+.||||++.... .....+.+.+|++++++++||||+++++++.+.. ..++
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~l 86 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNIS-FLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL 86 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGG-GGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEecccc-ccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEE
Confidence 467999999999999999999876 58999999997542 2334577889999999999999999999998765 6799
Q ss_pred EEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEE----cCCCCeEEeecC
Q 002238 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL----GDDMRAKVADFG 744 (948)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill----~~~~~~kl~DfG 744 (948)
||||+++|+|.+++.... ....+++..++.++.|++.||+|||+ .+|+||||||+|||+ +.++.+||+|||
T Consensus 87 v~e~~~~g~L~~~l~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG 161 (396)
T 4eut_A 87 IMEFCPCGSLYTVLEEPS--NAYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161 (396)
T ss_dssp EECCCTTEEHHHHTTSGG--GTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEECTTSCEEEEECCGG
T ss_pred EEecCCCCCHHHHHHhhh--cccCCCHHHHHHHHHHHHHHHHHHHH---CCEEECCcCHHHEEEeecCCCceeEEEecCC
Confidence 999999999999985422 22348999999999999999999997 899999999999999 777789999999
Q ss_pred CceecCCCCCceeeeecccccccCceeccc--------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhh-hhHHHHH
Q 002238 745 LVRLAPEGKGSIETRIAGTFGYLAPEYAVT--------GRVTTKVDVFSFGVILMELITGRKALDESQPEES-MHLVTWF 815 (948)
Q Consensus 745 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~-~~~~~~~ 815 (948)
+++...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ......+
T Consensus 162 ~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~ 239 (396)
T 4eut_A 162 AARELEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKI 239 (396)
T ss_dssp GCEECCCGG--GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHH
T ss_pred CceEccCCC--ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHH
Confidence 998765432 2334569999999999865 5678899999999999999999999975432211 1111111
Q ss_pred HHhhcCcccc---ccccC------cccC-CccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhh
Q 002238 816 RRIHLSKDSF---HKAID------PTID-LNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVEL 877 (948)
Q Consensus 816 ~~~~~~~~~~---~~~~~------~~~~-~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~ 877 (948)
... ...... ..... ..++ ...........+.+++.+|++.||++||++.++++.++++...
T Consensus 240 ~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 240 ITG-KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp HHS-CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred hcC-CCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 110 000000 00000 0011 0112245566788999999999999999999999999998753
No 148
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=6.4e-39 Score=353.97 Aligned_cols=258 Identities=27% Similarity=0.427 Sum_probs=202.0
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcE----EEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCce
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTK----IAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEK 666 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~----vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 666 (948)
.++|++.+.||+|+||.||+|.+. +++. ||+|.+... ......+.+.+|+.++++++||||+++++++.++. .
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~ 91 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-V 91 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCC-SSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-E
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccc-cCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-c
Confidence 467999999999999999999864 4554 577766543 23445688999999999999999999999998754 7
Q ss_pred EEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCc
Q 002238 667 LLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLV 746 (948)
Q Consensus 667 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla 746 (948)
++||||+.+|+|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++
T Consensus 92 ~~v~~~~~~g~L~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kL~DfG~a 164 (327)
T 3lzb_A 92 QLITQLMPFGCLLDYVRE----HKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLA 164 (327)
T ss_dssp EEEECCCSSCBHHHHHHH----TTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTC-
T ss_pred eEEEEecCCCcHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHhh---CCCcCCCCCHHHEEEcCCCCEEEccCcce
Confidence 899999999999998854 23568999999999999999999997 89999999999999999999999999999
Q ss_pred eecCCCCC-ceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHhhcCccc
Q 002238 747 RLAPEGKG-SIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDESQPEESMHLVTWFRRIHLSKDS 824 (948)
Q Consensus 747 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 824 (948)
+....... .......||+.|+|||++.+..++.++||||||+++|||++ |+.||......+....+. . ...
T Consensus 165 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~---~----~~~ 237 (327)
T 3lzb_A 165 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE---K----GER 237 (327)
T ss_dssp ---------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH---T----TCC
T ss_pred eEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH---c----CCC
Confidence 86543322 22233457889999999999999999999999999999999 999998766544322111 1 000
Q ss_pred cccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhh
Q 002238 825 FHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVE 876 (948)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~ 876 (948)
. .. .......+.+++.+|++.||.+||++.|+++.|+.+..
T Consensus 238 ~--~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 278 (327)
T 3lzb_A 238 L--PQ---------PPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp C--CC---------CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred C--CC---------CccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 0 00 11123458899999999999999999999999999864
No 149
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.1e-38 Score=367.31 Aligned_cols=250 Identities=28% Similarity=0.418 Sum_probs=206.9
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS-GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 669 (948)
.++|.+.+.||+|+||.||+|+.. +|+.||||++...... ......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 367999999999999999999875 7999999999754221 23356789999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceec
Q 002238 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (948)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~ 749 (948)
|||+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 95 ~E~~~gg~L~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDLkp~NIll~~~~~vkL~DFG~a~~~ 166 (476)
T 2y94_A 95 MEYVSGGELFDYICK-----NGRLDEKESRRLFQQILSGVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMM 166 (476)
T ss_dssp EECCSSEEHHHHTTS-----SSSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred EeCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcccccHHHEEEecCCCeEEEeccchhhc
Confidence 999999999998832 3578999999999999999999997 89999999999999999999999999999976
Q ss_pred CCCCCceeeeecccccccCceecccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCccccccc
Q 002238 750 PEGKGSIETRIAGTFGYLAPEYAVTGRV-TTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHKA 828 (948)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 828 (948)
.... ......||+.|+|||++.+..+ +.++||||+||++|||++|+.||.+........ .+.......
T Consensus 167 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~------~i~~~~~~~--- 235 (476)
T 2y94_A 167 SDGE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFK------KICDGIFYT--- 235 (476)
T ss_dssp CTTC--CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHH------HHHTTCCCC---
T ss_pred cccc--cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHH------HHhcCCcCC---
Confidence 5432 2344579999999999988765 789999999999999999999998765433211 111111000
Q ss_pred cCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 829 IDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 829 ~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
+ ......+.+++.+|++.||.+|||+.+++++
T Consensus 236 --p--------~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 236 --P--------QYLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp --C--------TTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred --C--------ccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 0 0112358899999999999999999999874
No 150
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=7.2e-39 Score=354.52 Aligned_cols=246 Identities=25% Similarity=0.344 Sum_probs=203.9
Q ss_pred HhhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCCh------hhHHHHHHHHHHHHhcCCCceeeEEeEEEe
Q 002238 590 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISG------KGLTEFKSEIAVLTKVRHRHLVALLGHCLD 662 (948)
Q Consensus 590 ~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 662 (948)
...++|++.+.||+|+||.||+|... +++.||||++....... .....+.+|++++++++||||+++++++.+
T Consensus 21 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~ 100 (335)
T 3dls_A 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN 100 (335)
T ss_dssp HHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred ccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee
Confidence 34678999999999999999999864 78999999998653221 134467889999999999999999999999
Q ss_pred CCceEEEEEecCCC-ChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEe
Q 002238 663 GNEKLLVFEYMPQG-TLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVA 741 (948)
Q Consensus 663 ~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~ 741 (948)
.+..++||||+.+| +|.+++.. ...+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+
T Consensus 101 ~~~~~lv~e~~~~g~~l~~~~~~-----~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~ 172 (335)
T 3dls_A 101 QGFFQLVMEKHGSGLDLFAFIDR-----HPRLDEPLASYIFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLI 172 (335)
T ss_dssp SSEEEEEEECCTTSCBHHHHHHT-----CCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEEC
T ss_pred CCEEEEEEEeCCCCccHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEEeccCHHHEEEcCCCcEEEe
Confidence 99999999999777 99888843 3569999999999999999999997 899999999999999999999999
Q ss_pred ecCCceecCCCCCceeeeecccccccCceecccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhc
Q 002238 742 DFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRV-TTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHL 820 (948)
Q Consensus 742 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 820 (948)
|||+++...... ......||+.|+|||++.+..+ +.++||||||+++|||++|+.||.......
T Consensus 173 Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~------------- 237 (335)
T 3dls_A 173 DFGSAAYLERGK--LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETV------------- 237 (335)
T ss_dssp CCTTCEECCTTC--CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGT-------------
T ss_pred ecccceECCCCC--ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHH-------------
Confidence 999998765543 2344679999999999988876 889999999999999999999997532110
Q ss_pred CccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 821 SKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
.....+.. ....++.+++.+|++.||++||++.++++.
T Consensus 238 -----~~~~~~~~-------~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 238 -----EAAIHPPY-------LVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp -----TTCCCCSS-------CCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred -----hhccCCCc-------ccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00011000 122458899999999999999999999873
No 151
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=4.4e-39 Score=355.55 Aligned_cols=262 Identities=25% Similarity=0.339 Sum_probs=209.1
Q ss_pred HHHHHHhhcCCccc-ceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhc-CCCceeeEEeEEE
Q 002238 585 IQVLRNVTNNFSEE-NILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCL 661 (948)
Q Consensus 585 ~~~l~~~~~~~~~~-~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~ 661 (948)
++..+...++|.+. +.||+|+||.||+|... +|+.||||++............+.+|+.+++.+ .||||+++++++.
T Consensus 20 ~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~ 99 (327)
T 3lm5_A 20 FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYE 99 (327)
T ss_dssp SBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEE
T ss_pred HHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEE
Confidence 33445667788887 89999999999999875 689999999987654555578899999999999 5699999999999
Q ss_pred eCCceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcC---CCCe
Q 002238 662 DGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD---DMRA 738 (948)
Q Consensus 662 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~---~~~~ 738 (948)
+.+..++||||+++|+|.+++.. .....+++.+++.++.|++.||+|||+ .+|+||||||+||+++. ++.+
T Consensus 100 ~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~i~~ql~~~L~~LH~---~givH~Dikp~NIl~~~~~~~~~~ 173 (327)
T 3lm5_A 100 NTSEIILILEYAAGGEIFSLCLP---ELAEMVSENDVIRLIKQILEGVYYLHQ---NNIVHLDLKPQNILLSSIYPLGDI 173 (327)
T ss_dssp CSSEEEEEEECCTTEEGGGGGSS---CC-CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESCBTTBCCE
T ss_pred eCCeEEEEEEecCCCcHHHHHHH---hcccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCChHHEEEecCCCCCcE
Confidence 99999999999999999988743 233678999999999999999999997 89999999999999997 7899
Q ss_pred EEeecCCceecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHh
Q 002238 739 KVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRI 818 (948)
Q Consensus 739 kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 818 (948)
||+|||+++...... ......||+.|+|||++.+..++.++||||||+++|||++|+.||......+....+ ...
T Consensus 174 kL~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i---~~~ 248 (327)
T 3lm5_A 174 KIVDFGMSRKIGHAC--ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNI---SQV 248 (327)
T ss_dssp EECCGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH---HHT
T ss_pred EEeeCccccccCCcc--ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHH---Hhc
Confidence 999999998764432 233457999999999999999999999999999999999999999876543322111 111
Q ss_pred hcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 819 HLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
...... .........+.+++.+|++.||++||+++++++
T Consensus 249 ---~~~~~~---------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 249 ---NVDYSE---------ETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp ---CCCCCT---------TTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ---ccccCc---------hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 111100 011122345889999999999999999999876
No 152
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=7.7e-39 Score=352.88 Aligned_cols=249 Identities=24% Similarity=0.327 Sum_probs=180.4
Q ss_pred cceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcC-CCceeeEEeEEEeCCceEEEEEecCC
Q 002238 598 ENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR-HRHLVALLGHCLDGNEKLLVFEYMPQ 675 (948)
Q Consensus 598 ~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e~~~~ 675 (948)
.+.||+|+||.||+|..+ +++.||||++... ....+.+|+.+++.+. ||||+++++++.++...++||||+++
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 90 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-----MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNG 90 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-----GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh-----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCC
Confidence 478999999999999875 6899999998643 3467889999999997 99999999999999999999999999
Q ss_pred CChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCC---CeEEeecCCceecCCC
Q 002238 676 GTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM---RAKVADFGLVRLAPEG 752 (948)
Q Consensus 676 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~---~~kl~DfGla~~~~~~ 752 (948)
|+|.+++.. ...+++.++..++.|++.||+|||+ .+|+||||||+|||++.++ .+||+|||+++.....
T Consensus 91 ~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 162 (325)
T 3kn6_A 91 GELFERIKK-----KKHFSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD 162 (325)
T ss_dssp CBHHHHHHH-----CSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-
T ss_pred CcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCCeecCCCHHHEEEecCCCcccEEEeccccceecCCC
Confidence 999999853 2578999999999999999999997 8999999999999998765 7999999999866543
Q ss_pred CCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhh-hhHHHHHHHhhcCccccccccCc
Q 002238 753 KGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEES-MHLVTWFRRIHLSKDSFHKAIDP 831 (948)
Q Consensus 753 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 831 (948)
.. ......||+.|+|||++.+..++.++||||||+++|||++|+.||........ .........+......
T Consensus 163 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~------- 234 (325)
T 3kn6_A 163 NQ-PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFS------- 234 (325)
T ss_dssp ----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCC-------
T ss_pred CC-cccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCC-------
Confidence 32 23445689999999999999999999999999999999999999986543211 1111112222111110
Q ss_pred ccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 832 TIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 832 ~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
.. .........++.+++.+|++.||.+||+++++++
T Consensus 235 -~~-~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 235 -FE-GEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp -CC-SHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred -CC-cccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 00 1111223456889999999999999999999865
No 153
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.5e-38 Score=346.63 Aligned_cols=261 Identities=29% Similarity=0.443 Sum_probs=205.9
Q ss_pred cCCcccceecccCceEEEEEEEcC----CcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEe-CCceE
Q 002238 593 NNFSEENILGRGGFGTVYKGELHD----GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLD-GNEKL 667 (948)
Q Consensus 593 ~~~~~~~~lg~G~fg~Vy~~~~~~----g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~~ 667 (948)
.+|+..+.||+|+||.||+|.+.+ ...||||.+... ......+.+.+|+.++++++||||+++++++.+ ++..+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTC-CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccC-CCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 468889999999999999998642 235899988753 244556789999999999999999999998754 55789
Q ss_pred EEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCce
Q 002238 668 LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 747 (948)
Q Consensus 668 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~ 747 (948)
+||||+++|+|.+++.. ....+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 104 ~v~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~ql~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~ 176 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRN----ETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLAR 176 (298)
T ss_dssp EEEECCTTCBHHHHHHC----TTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSCGGGC
T ss_pred EEEeCCCCCCHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEECCCCCEEECcccccc
Confidence 99999999999999843 33568999999999999999999997 899999999999999999999999999998
Q ss_pred ecCCCCC---ceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHhhcCcc
Q 002238 748 LAPEGKG---SIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDESQPEESMHLVTWFRRIHLSKD 823 (948)
Q Consensus 748 ~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 823 (948)
....... .......||+.|+|||.+.+..++.++||||||+++|||++ |.+||......+..... ....
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~------~~~~- 249 (298)
T 3f66_A 177 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL------LQGR- 249 (298)
T ss_dssp CCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHH------HTTC-
T ss_pred cccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHH------hcCC-
Confidence 6543321 12334567889999999999999999999999999999999 56666654433321111 1000
Q ss_pred ccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhhhC
Q 002238 824 SFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELWK 879 (948)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~~~ 879 (948)
....+ ...+..+.+++.+|++.+|++||++.++++.|+++...+.
T Consensus 250 ---~~~~~--------~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~ 294 (298)
T 3f66_A 250 ---RLLQP--------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 294 (298)
T ss_dssp ---CCCCC--------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred ---CCCCC--------ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 00001 1122458899999999999999999999999999987543
No 154
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=4.7e-39 Score=356.53 Aligned_cols=253 Identities=23% Similarity=0.350 Sum_probs=202.1
Q ss_pred hhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCceEE
Q 002238 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKLL 668 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~l 668 (948)
..++|++.+.||+|+||.||+|..+ +|+.||||++..... ...+|++++.++ +||||+++++++.+++..++
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~l 93 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR------DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYV 93 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC------CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC------ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEE
Confidence 4678999999999999999999875 689999999976421 245788888888 79999999999999999999
Q ss_pred EEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCC----CCeEEeecC
Q 002238 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD----MRAKVADFG 744 (948)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~----~~~kl~DfG 744 (948)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||+.++ +.+||+|||
T Consensus 94 v~E~~~gg~L~~~i~~-----~~~~~~~~~~~~~~qi~~al~~lH~---~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg 165 (342)
T 2qr7_A 94 VTELMKGGELLDKILR-----QKFFSEREASAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFG 165 (342)
T ss_dssp EECCCCSCBHHHHHHT-----CTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSCSGGGEEECCCT
T ss_pred EEeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCcEeccCCHHHEEEecCCCCcCeEEEEECC
Confidence 9999999999998843 2568999999999999999999997 899999999999998543 359999999
Q ss_pred CceecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCccc
Q 002238 745 LVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDS 824 (948)
Q Consensus 745 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 824 (948)
+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..............+. .....
T Consensus 166 ~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~---~~~~~ 241 (342)
T 2qr7_A 166 FAKQLRAENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIG---SGKFS 241 (342)
T ss_dssp TCEECBCTTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHH---HCCCC
T ss_pred CcccCcCCCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHc---cCCcc
Confidence 9987654332 2344578999999999988889999999999999999999999998643322222222111 11111
Q ss_pred cccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 825 FHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
+.. ..+.....++.+++.+|++.||++||++.+++++
T Consensus 242 ~~~---------~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 242 LSG---------GYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp CCS---------TTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred cCc---------cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 110 0111223468899999999999999999998875
No 155
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=9.6e-39 Score=353.64 Aligned_cols=270 Identities=23% Similarity=0.354 Sum_probs=205.6
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 670 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 670 (948)
.++|++.+.||+|+||.||+|+.. +|+.||||++..........+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 467999999999999999999875 5899999999776545555677889999999999999999999999999999999
Q ss_pred EecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceecC
Q 002238 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 750 (948)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~~ 750 (948)
||+++++|.+++.. ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 104 e~~~~~~l~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 175 (331)
T 4aaa_A 104 EFVDHTILDDLELF-----PNGLDYQVVQKYLFQIINGIGFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLA 175 (331)
T ss_dssp ECCSEEHHHHHHHS-----TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred ecCCcchHHHHHhh-----ccCCCHHHHHHHHHHHHHHHHHHHH---CCEEccCcChheEEEcCCCcEEEEeCCCceeec
Confidence 99999988877532 2568999999999999999999997 899999999999999999999999999998654
Q ss_pred CCCCceeeeecccccccCceecccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHH--------hhcC
Q 002238 751 EGKGSIETRIAGTFGYLAPEYAVTG-RVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRR--------IHLS 821 (948)
Q Consensus 751 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~--------~~~~ 821 (948)
.... ......||+.|+|||++.+. .++.++||||||+++|||++|+.||......+....+..... ....
T Consensus 176 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (331)
T 4aaa_A 176 APGE-VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNK 254 (331)
T ss_dssp ---------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHH
T ss_pred CCcc-ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhh
Confidence 3322 23345689999999999875 789999999999999999999999987665433222111000 0000
Q ss_pred ccccccccCcccCC----ccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 822 KDSFHKAIDPTIDL----NEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 822 ~~~~~~~~~~~~~~----~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
...+.....+.+.. ..........+.+++.+|++.||++||+++|+++.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 255 NPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp CGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00011111111110 11111234568999999999999999999998873
No 156
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=6.6e-39 Score=356.95 Aligned_cols=267 Identities=16% Similarity=0.167 Sum_probs=199.7
Q ss_pred hcCCcccceecccCceEEEEEEEc----CCcEEEEEEeecCcCCh---------hhHHHHHHHHHHHHhcCCCceeeEEe
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH----DGTKIAVKRMEAGVISG---------KGLTEFKSEIAVLTKVRHRHLVALLG 658 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~----~g~~vavK~~~~~~~~~---------~~~~~~~~E~~~l~~l~H~niv~l~~ 658 (948)
.++|++.+.||+|+||.||+|... ++..||||++....... .....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 467999999999999999999875 57899999987642111 01234678889999999999999999
Q ss_pred EEEe----CCceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcC
Q 002238 659 HCLD----GNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD 734 (948)
Q Consensus 659 ~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~ 734 (948)
++.+ ....++||||+ +++|.+++.. ...+++.+++.++.||+.||+|||+ .+|+||||||+|||++.
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~ 186 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQ-----NGTFKKSTVLQLGIRMLDVLEYIHE---NEYVHGDIKAANLLLGY 186 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBG-----GGBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEES
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCcCHHHEEEcc
Confidence 9987 67789999999 9999998843 1378999999999999999999997 79999999999999998
Q ss_pred CC--CeEEeecCCceecCCCCC------ceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch
Q 002238 735 DM--RAKVADFGLVRLAPEGKG------SIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPE 806 (948)
Q Consensus 735 ~~--~~kl~DfGla~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~ 806 (948)
++ .+||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 187 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~ 266 (345)
T 2v62_A 187 KNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKD 266 (345)
T ss_dssp SSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTC
T ss_pred CCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccc
Confidence 87 999999999986543211 1123457999999999999999999999999999999999999999653222
Q ss_pred hhhhHHHHHHHhhc-CccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhh
Q 002238 807 ESMHLVTWFRRIHL-SKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVE 876 (948)
Q Consensus 807 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~ 876 (948)
.... ......... .......... ....+.++.+++.+|++.||++||++.+|++.|+.+..
T Consensus 267 ~~~~-~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 267 PVAV-QTAKTNLLDELPQSVLKWAP--------SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHH-HHHHHHHHHTTTHHHHHHSC--------TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred cHHH-HHHHHhhcccccHHHHhhcc--------ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 1111 111111100 0000000000 00223468999999999999999999999999988643
No 157
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=5.5e-39 Score=354.97 Aligned_cols=266 Identities=27% Similarity=0.377 Sum_probs=209.3
Q ss_pred hcCCcccceecccCceEEEEEEE-----cCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEE--eCC
Q 002238 592 TNNFSEENILGRGGFGTVYKGEL-----HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCL--DGN 664 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~--~~~ 664 (948)
.++|++.+.||+|+||.||+|++ .+++.||||++... .....+.+.+|++++++++||||+++++++. +..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 99 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS--GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQ 99 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSC
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC--CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCc
Confidence 36789999999999999999984 36889999998764 4555678999999999999999999999987 445
Q ss_pred ceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecC
Q 002238 665 EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 744 (948)
Q Consensus 665 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfG 744 (948)
..++||||+++++|.+++... ...+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg 172 (327)
T 3lxl_A 100 SLRLVMEYLPSGCLRDFLQRH----RARLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADFG 172 (327)
T ss_dssp EEEEEEECCTTCBHHHHHHHH----GGGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCGG
T ss_pred eEEEEEeecCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChhhEEECCCCCEEEcccc
Confidence 688999999999999998542 1358999999999999999999997 899999999999999999999999999
Q ss_pred CceecCCCCCc--eeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhh---------hHHH
Q 002238 745 LVRLAPEGKGS--IETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESM---------HLVT 813 (948)
Q Consensus 745 la~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~---------~~~~ 813 (948)
+++........ ......||+.|+|||++.+..++.++||||||+++|||++|+.||......... ....
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 252 (327)
T 3lxl_A 173 LAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSR 252 (327)
T ss_dssp GCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHH
T ss_pred cceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHH
Confidence 99976544322 123345888999999999999999999999999999999999998653321100 0000
Q ss_pred HHHHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhhh
Q 002238 814 WFRRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELW 878 (948)
Q Consensus 814 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~~ 878 (948)
....... . .. ..........+.+++.+|++.||.+||++.++++.|+.+....
T Consensus 253 ~~~~~~~-~------~~-----~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 305 (327)
T 3lxl_A 253 LLELLEE-G------QR-----LPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGS 305 (327)
T ss_dssp HHHHHHT-T------CC-----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred HHHHhhc-c------cC-----CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 0000000 0 00 0011223356889999999999999999999999999986544
No 158
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.7e-40 Score=363.00 Aligned_cols=266 Identities=21% Similarity=0.341 Sum_probs=191.8
Q ss_pred hcCCcccceecccCceEEEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHh--cCCCceeeEEeEEEeCC----c
Q 002238 592 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTK--VRHRHLVALLGHCLDGN----E 665 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~~----~ 665 (948)
.++|++.+.||+|+||.||+|++. |+.||||++... ....+.+|.+++.. ++||||+++++++.+.. .
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 75 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 75 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T-----THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEE
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc-----chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccce
Confidence 468999999999999999999875 899999998642 34567888888888 79999999999998776 7
Q ss_pred eEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcc-----CCCeeecCCCCccEEEcCCCCeEE
Q 002238 666 KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLA-----HQSFIHRDLKPSNILLGDDMRAKV 740 (948)
Q Consensus 666 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-----~~~ivHrDik~~Nill~~~~~~kl 740 (948)
.++||||+++|+|.+++.. ..+++..++.++.|++.||+|||... +.+|+||||||+|||++.++.+||
T Consensus 76 ~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl 149 (303)
T 3gxj_A 76 LWLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCI 149 (303)
T ss_dssp EEEEEECCTTCCHHHHHHH------CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-B
T ss_pred eEEEEeccCCCCHHHHHhc------cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEE
Confidence 8999999999999999843 36788889999999999999999211 289999999999999999999999
Q ss_pred eecCCceecCCCCCce---eeeecccccccCceecccC------CCCchhhHHHHHHHHHHHHhC----------CCCCC
Q 002238 741 ADFGLVRLAPEGKGSI---ETRIAGTFGYLAPEYAVTG------RVTTKVDVFSFGVILMELITG----------RKALD 801 (948)
Q Consensus 741 ~DfGla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~s~Gv~l~elltg----------~~p~~ 801 (948)
+|||+++......... .....||+.|+|||++.+. .++.++|||||||++|||++| +.||.
T Consensus 150 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~ 229 (303)
T 3gxj_A 150 ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYY 229 (303)
T ss_dssp CCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTT
T ss_pred eecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeecccc
Confidence 9999997554433221 2334799999999999776 445789999999999999999 66665
Q ss_pred CCCchhhhhHHHHHHHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhh
Q 002238 802 ESQPEESMHLVTWFRRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVE 876 (948)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~ 876 (948)
...+..... ....... ......+.++...........+.+++.+||+.||.+||++.++++.|+.+.+
T Consensus 230 ~~~~~~~~~-~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~ 297 (303)
T 3gxj_A 230 DLVPSDPSV-EEMRKVV------CEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp TTCC-CCCC-C-CHHHH------TTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CC
T ss_pred ccCCCCccH-HHHHHHH------HHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhh
Confidence 433211100 0000000 0111222222222233556679999999999999999999999999998864
No 159
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=6.3e-39 Score=346.09 Aligned_cols=257 Identities=23% Similarity=0.366 Sum_probs=207.5
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEe--CCceEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLD--GNEKLL 668 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~l 668 (948)
.++|++.+.||+|+||.||+|... +|+.||+|++..........+.+.+|++++++++||||+++++++.+ ....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 467999999999999999999875 78999999998765566667889999999999999999999998854 567899
Q ss_pred EEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCC-----eeecCCCCccEEEcCCCCeEEeec
Q 002238 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQS-----FIHRDLKPSNILLGDDMRAKVADF 743 (948)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~-----ivHrDik~~Nill~~~~~~kl~Df 743 (948)
||||+++++|.+++..... ....+++..++.++.|++.||+|||+ .+ |+||||||+||+++.++.+||+||
T Consensus 85 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~~~~~ivH~dl~p~NIl~~~~~~~kl~df 160 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTK-ERQYLDEEFVLRVMTQLTLALKECHR---RSDGGHTVLHRDLKPANVFLDGKQNVKLGDF 160 (279)
T ss_dssp EEECCTTEEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHH---HC------CCCCCSGGGEEECSSSCEEECCC
T ss_pred EEeCCCCCCHHHHHHhhcc-cCCCCCHHHHHHHHHHHHHHHHHHhc---ccCCCCeeEEeccchhhEEEcCCCCEEEecC
Confidence 9999999999999865332 33568999999999999999999997 56 999999999999999999999999
Q ss_pred CCceecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCcc
Q 002238 744 GLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKD 823 (948)
Q Consensus 744 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 823 (948)
|+++....... ......||+.|+|||++.+..++.++||||||+++|||++|+.||......+.... +.. .
T Consensus 161 g~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~---i~~-----~ 231 (279)
T 2w5a_A 161 GLARILNHDTS-FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGK---IRE-----G 231 (279)
T ss_dssp CHHHHC---CH-HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH---HHH-----T
T ss_pred chheeeccccc-cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHH---Hhh-----c
Confidence 99986543321 22345689999999999999999999999999999999999999987654322111 111 1
Q ss_pred ccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHH
Q 002238 824 SFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVL 871 (948)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L 871 (948)
... .+. .....++.+++.+|++.||.+||++.|+++.+
T Consensus 232 ~~~-----~~~-----~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~ 269 (279)
T 2w5a_A 232 KFR-----RIP-----YRYSDELNEIITRMLNLKDYHRPSVEEILENP 269 (279)
T ss_dssp CCC-----CCC-----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred ccc-----cCC-----cccCHHHHHHHHHHcCCCcccCCCHHHHHhCh
Confidence 110 011 11234688999999999999999999998854
No 160
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=2e-38 Score=359.31 Aligned_cols=254 Identities=22% Similarity=0.302 Sum_probs=193.1
Q ss_pred hcCCccc-ceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHh-cCCCceeeEEeEEEe----CC
Q 002238 592 TNNFSEE-NILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTK-VRHRHLVALLGHCLD----GN 664 (948)
Q Consensus 592 ~~~~~~~-~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~-l~H~niv~l~~~~~~----~~ 664 (948)
.++|.+. ++||+|+||.||+|..+ +|+.||||++... ..+.+|++++.+ .+||||+++++++.. ..
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~ 132 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAGRK 132 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCc
Confidence 3566665 78999999999999875 6899999998642 457788888754 589999999998875 55
Q ss_pred ceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcC---CCCeEEe
Q 002238 665 EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD---DMRAKVA 741 (948)
Q Consensus 665 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~---~~~~kl~ 741 (948)
..++||||+++|+|.+++.. .....+++.++..|+.||+.||+|||+ .+|+||||||+|||++. ++.+||+
T Consensus 133 ~~~lv~E~~~gg~L~~~l~~---~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~~~kl~ 206 (400)
T 1nxk_A 133 CLLIVMECLDGGELFSRIQD---RGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLT 206 (400)
T ss_dssp EEEEEEECCCSEEHHHHHHC---C---CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSTTCCEEEC
T ss_pred EEEEEEEeCCCCcHHHHHHH---hCCCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCcceEEEecCCCCccEEEE
Confidence 68999999999999999854 223469999999999999999999997 89999999999999997 7889999
Q ss_pred ecCCceecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhh-hHHHHHHHhhc
Q 002238 742 DFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESM-HLVTWFRRIHL 820 (948)
Q Consensus 742 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~-~~~~~~~~~~~ 820 (948)
|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......... .....+. .
T Consensus 207 DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~---~ 281 (400)
T 1nxk_A 207 DFGFAKETTSHN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR---M 281 (400)
T ss_dssp CCTTCEECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHH---H
T ss_pred ecccccccCCCC--ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHH---c
Confidence 999998654332 234567899999999999999999999999999999999999999875432211 0111111 1
Q ss_pred CccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHH
Q 002238 821 SKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLS 872 (948)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~ 872 (948)
....+. .+ .......++.+++.+|++.||++||++.++++.-.
T Consensus 282 ~~~~~~---~~------~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~ 324 (400)
T 1nxk_A 282 GQYEFP---NP------EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW 324 (400)
T ss_dssp TCCCCC---TT------TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHH
T ss_pred CcccCC---Cc------ccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcc
Confidence 111110 00 01122346889999999999999999999998643
No 161
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=2.1e-38 Score=344.02 Aligned_cols=249 Identities=25% Similarity=0.391 Sum_probs=201.6
Q ss_pred cCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEe----CCceE
Q 002238 593 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLD----GNEKL 667 (948)
Q Consensus 593 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~~ 667 (948)
+.|++.+.||+|+||.||+|... ++..||+|++..........+.+.+|+.++++++||||+++++++.. +...+
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 34778889999999999999874 68899999998766666777889999999999999999999999875 34579
Q ss_pred EEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCC--eeecCCCCccEEEc-CCCCeEEeecC
Q 002238 668 LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQS--FIHRDLKPSNILLG-DDMRAKVADFG 744 (948)
Q Consensus 668 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivHrDik~~Nill~-~~~~~kl~DfG 744 (948)
+||||+++|+|.+++... ..+++..++.++.|++.||+|||+ .+ |+||||||+||+++ .++.+||+|||
T Consensus 106 lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg 177 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLG 177 (290)
T ss_dssp EEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEEECCTT
T ss_pred EEEEecCCCCHHHHHHHc-----cCCCHHHHHHHHHHHHHHHHHHHc---CCCCEEECCCCHHHEEEECCCCCEEEeeCC
Confidence 999999999999998542 468999999999999999999997 66 99999999999997 78899999999
Q ss_pred CceecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCccc
Q 002238 745 LVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDS 824 (948)
Q Consensus 745 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 824 (948)
++...... ......||+.|+|||++. +.++.++||||||+++|||++|+.||......... . ..... ..
T Consensus 178 ~~~~~~~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~--~---~~~~~--~~ 246 (290)
T 1t4h_A 178 LATLKRAS---FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQI--Y---RRVTS--GV 246 (290)
T ss_dssp GGGGCCTT---SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHH--H---HHHTT--TC
T ss_pred Cccccccc---ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHH--H---HHHhc--cC
Confidence 99754432 234457999999999876 46999999999999999999999999875433221 1 11111 00
Q ss_pred cccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 825 FHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
....+ ......++.+++.+|++.||.+||++.++++
T Consensus 247 ~~~~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 247 KPASF---------DKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp CCGGG---------GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred Ccccc---------CCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 00001 1112245889999999999999999999986
No 162
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=7.7e-39 Score=345.37 Aligned_cols=249 Identities=27% Similarity=0.478 Sum_probs=202.9
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS-GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 669 (948)
.++|++.+.||+|+||.||+|... +++.||||++...... ......+.+|++++++++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 568999999999999999999875 5789999998654222 22356789999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceec
Q 002238 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (948)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~ 749 (948)
|||+++|+|.+++... ..+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.++|+|||++...
T Consensus 88 ~e~~~~~~l~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~ 159 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHA 159 (279)
T ss_dssp ECCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHT---TTCEECCCCGGGEEECTTSCEEECSCCEESCC
T ss_pred EecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHhEEEcCCCCEEEEeccccccC
Confidence 9999999999988542 468999999999999999999997 89999999999999999999999999998654
Q ss_pred CCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCcccccccc
Q 002238 750 PEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHKAI 829 (948)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 829 (948)
... ......||+.|+|||++.+..++.++||||||+++|||++|+.||......+....+. .. ...+
T Consensus 160 ~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~---~~---~~~~---- 226 (279)
T 3fdn_A 160 PSS---RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS---RV---EFTF---- 226 (279)
T ss_dssp -----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH---HT---CCCC----
T ss_pred Ccc---cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHH---hC---CCCC----
Confidence 332 2334578999999999999999999999999999999999999998765433222111 10 1001
Q ss_pred CcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 830 DPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 830 ~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
.. .....+.+++.+|++.||.+||++.|+++.
T Consensus 227 ~~---------~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 227 PD---------FVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp CT---------TSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred CC---------cCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 01 122358899999999999999999999985
No 163
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.9e-38 Score=344.41 Aligned_cols=261 Identities=27% Similarity=0.387 Sum_probs=206.5
Q ss_pred CCcccceecccCceEEEEEEEc-CC---cEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCce-EE
Q 002238 594 NFSEENILGRGGFGTVYKGELH-DG---TKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEK-LL 668 (948)
Q Consensus 594 ~~~~~~~lg~G~fg~Vy~~~~~-~g---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~-~l 668 (948)
.|...++||+|+||.||+|.+. ++ ..||+|++... ......+.+.+|+.++++++||||+++++++.+.+.. ++
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 100 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI-TEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHV 100 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTC-CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeecccc-ccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEE
Confidence 4566789999999999999863 23 37999998753 2445567899999999999999999999999876665 99
Q ss_pred EEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCcee
Q 002238 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 748 (948)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~ 748 (948)
||||+.+|+|.+++.. ....+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 101 v~e~~~~~~L~~~~~~----~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 173 (298)
T 3pls_A 101 LLPYMCHGDLLQFIRS----PQRNPTVKDLISFGLQVARGMEYLAE---QKFVHRDLAARNCMLDESFTVKVADFGLARD 173 (298)
T ss_dssp EECCCTTCBHHHHHHC----TTCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECCTTSSCT
T ss_pred EEecccCCCHHHHHhc----cccCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEeCcCCCccc
Confidence 9999999999998843 34678999999999999999999997 7999999999999999999999999999985
Q ss_pred cCCCC---CceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCC-CCCCCchhhhhHHHHHHHhhcCccc
Q 002238 749 APEGK---GSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKA-LDESQPEESMHLVTWFRRIHLSKDS 824 (948)
Q Consensus 749 ~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p-~~~~~~~~~~~~~~~~~~~~~~~~~ 824 (948)
..... ........+|+.|+|||.+.+..++.++||||||+++|||++|..| |......+.. ....... .
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~---~~~~~~~----~ 246 (298)
T 3pls_A 174 ILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLT---HFLAQGR----R 246 (298)
T ss_dssp TTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHH---HHHHTTC----C
T ss_pred ccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHH---HHhhcCC----C
Confidence 43321 1122345688999999999999999999999999999999995555 4444333221 1111100 0
Q ss_pred cccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhhhCC
Q 002238 825 FHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELWKP 880 (948)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~~~~ 880 (948)
... .......+.+++.+|++.+|.+||++.++++.|+++......
T Consensus 247 ------~~~-----~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~ 291 (298)
T 3pls_A 247 ------LPQ-----PEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLG 291 (298)
T ss_dssp ------CCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCS
T ss_pred ------CCC-----CccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhc
Confidence 000 011224588999999999999999999999999999876543
No 164
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=3.4e-38 Score=341.11 Aligned_cols=254 Identities=24% Similarity=0.377 Sum_probs=205.2
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCCh----hhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCce
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISG----KGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEK 666 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 666 (948)
.++|++.+.||+|+||.||+|... +|+.||||+++...... ...+.+.+|+.++++++||||+++++++.++...
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 457999999999999999999876 68999999997653322 2367899999999999999999999999999999
Q ss_pred EEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCC----CeEEee
Q 002238 667 LLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM----RAKVAD 742 (948)
Q Consensus 667 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~----~~kl~D 742 (948)
++||||+++++|.+++.. ...+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++ .+||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~~~~kl~d 155 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAE-----KESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLID 155 (283)
T ss_dssp EEEEECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSSSSCCEEECC
T ss_pred EEEEeecCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChHHEEEecCCCCCCceEEEe
Confidence 999999999999999853 2468999999999999999999997 8999999999999998877 899999
Q ss_pred cCCceecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCc
Q 002238 743 FGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSK 822 (948)
Q Consensus 743 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 822 (948)
||+++...... ......||+.|+|||++.+..++.++||||||+++|||++|+.||......+.... .....
T Consensus 156 fg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~------~~~~~ 227 (283)
T 3bhy_A 156 FGIAHKIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTN------ISAVN 227 (283)
T ss_dssp CTTCEECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH------HHTTC
T ss_pred cccceeccCCC--cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHH------hHhcc
Confidence 99998664432 23345699999999999999999999999999999999999999987654332111 11111
Q ss_pred cccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 823 DSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
.... ..........+.+++.+|++.||++||++.++++.
T Consensus 228 ~~~~---------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 266 (283)
T 3bhy_A 228 YDFD---------EEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEH 266 (283)
T ss_dssp CCCC---------HHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred cCCc---------chhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhC
Confidence 1000 01111223468899999999999999999999983
No 165
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=6.6e-39 Score=358.74 Aligned_cols=250 Identities=26% Similarity=0.343 Sum_probs=195.4
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCC-hhhHHHHHHHHHH-HHhcCCCceeeEEeEEEeCCceEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS-GKGLTEFKSEIAV-LTKVRHRHLVALLGHCLDGNEKLL 668 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~~E~~~-l~~l~H~niv~l~~~~~~~~~~~l 668 (948)
.++|++.+.||+|+||.||+|+.+ +++.||||++.+.... ......+.+|..+ ++.++||||+++++++.+.+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 467999999999999999999876 6889999999875432 3334567777776 577899999999999999999999
Q ss_pred EEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCcee
Q 002238 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 748 (948)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~ 748 (948)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 117 v~E~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~ikL~DFG~a~~ 188 (373)
T 2r5t_A 117 VLDYINGGELFYHLQR-----ERCFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKE 188 (373)
T ss_dssp EEECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCBCGG
T ss_pred EEeCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEeeCccccc
Confidence 9999999999998854 1468899999999999999999997 8999999999999999999999999999985
Q ss_pred cCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCccccccc
Q 002238 749 APEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHKA 828 (948)
Q Consensus 749 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 828 (948)
..... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||......+.... +......
T Consensus 189 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~------i~~~~~~---- 257 (373)
T 2r5t_A 189 NIEHN-STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDN------ILNKPLQ---- 257 (373)
T ss_dssp GBCCC-CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHH------HHHSCCC----
T ss_pred cccCC-CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHH------HHhcccC----
Confidence 43322 234456799999999999999999999999999999999999999987654332211 1111111
Q ss_pred cCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 829 IDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 829 ~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
+.+. ....+.+++.+|++.||.+||++.+.++
T Consensus 258 ~~~~---------~~~~~~~li~~lL~~dp~~R~~~~~~~~ 289 (373)
T 2r5t_A 258 LKPN---------ITNSARHLLEGLLQKDRTKRLGAKDDFM 289 (373)
T ss_dssp CCSS---------SCHHHHHHHHHHTCSSGGGSTTTTTTHH
T ss_pred CCCC---------CCHHHHHHHHHHcccCHHhCCCCCCCHH
Confidence 1111 1235889999999999999999864433
No 166
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=1.4e-38 Score=380.45 Aligned_cols=252 Identities=24% Similarity=0.356 Sum_probs=203.3
Q ss_pred ceecccCceEEEEEEEc---CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEEEEecCC
Q 002238 599 NILGRGGFGTVYKGELH---DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEYMPQ 675 (948)
Q Consensus 599 ~~lg~G~fg~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 675 (948)
+.||+|+||.||+|.+. +++.||||+++.........+++.+|++++++++|||||++++++. .+..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCC
Confidence 57999999999999653 4678999999876545556788999999999999999999999986 4568999999999
Q ss_pred CChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceecCCCCC-
Q 002238 676 GTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKG- 754 (948)
Q Consensus 676 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~~~~~~- 754 (948)
|+|.+++.. ...+++.+++.++.||+.||+|||+ .+||||||||+|||++.++.+||+|||+++.......
T Consensus 454 g~L~~~l~~-----~~~l~~~~~~~i~~qi~~~L~yLH~---~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 525 (635)
T 4fl3_A 454 GPLNKYLQQ-----NRHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 525 (635)
T ss_dssp EEHHHHHHH-----CTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----
T ss_pred CCHHHHHhh-----CCCCCHHHHHHHHHHHHHHHHHHHH---CCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccc
Confidence 999999843 2568999999999999999999997 8999999999999999999999999999986654332
Q ss_pred -ceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHhhcCccccccccCcc
Q 002238 755 -SIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDESQPEESMHLVTWFRRIHLSKDSFHKAIDPT 832 (948)
Q Consensus 755 -~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 832 (948)
.......||+.|+|||++.+..++.++|||||||++|||++ |+.||.+....+....+. . .. ...
T Consensus 526 ~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~---~-----~~-----~~~ 592 (635)
T 4fl3_A 526 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE---K-----GE-----RMG 592 (635)
T ss_dssp ---------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH---T-----TC-----CCC
T ss_pred cccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH---c-----CC-----CCC
Confidence 12233457889999999999999999999999999999998 999998876544322211 1 00 000
Q ss_pred cCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhh
Q 002238 833 IDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVEL 877 (948)
Q Consensus 833 ~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~ 877 (948)
. ....+.++.+++.+||+.||++||++++|++.|+++...
T Consensus 593 ~-----p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~ 632 (635)
T 4fl3_A 593 C-----PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 632 (635)
T ss_dssp C-----CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred C-----CCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence 0 112235688999999999999999999999999988653
No 167
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.8e-38 Score=353.22 Aligned_cols=264 Identities=25% Similarity=0.377 Sum_probs=200.8
Q ss_pred hhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC-----
Q 002238 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGN----- 664 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~----- 664 (948)
+.++|+..+.||+|+||.||+|... +|+.||||++..........+.+.+|+++++.++||||+++++++....
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 102 (367)
T 1cm8_A 23 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 102 (367)
T ss_dssp CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred ecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence 3578999999999999999999874 7999999999765445555678999999999999999999999997653
Q ss_pred -ceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeec
Q 002238 665 -EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADF 743 (948)
Q Consensus 665 -~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~Df 743 (948)
..++||||+ +++|.+++.. ..+++..+..++.|+++||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~------~~l~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Df 172 (367)
T 1cm8_A 103 TDFYLVMPFM-GTDLGKLMKH------EKLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDF 172 (367)
T ss_dssp CCCEEEEECC-SEEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCC
T ss_pred ceEEEEEecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCHHHEEEcCCCCEEEEee
Confidence 459999999 8899988843 468999999999999999999997 89999999999999999999999999
Q ss_pred CCceecCCCCCceeeeecccccccCceeccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCc
Q 002238 744 GLVRLAPEGKGSIETRIAGTFGYLAPEYAVT-GRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSK 822 (948)
Q Consensus 744 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 822 (948)
|+++..... .+...||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+....+....+. .......
T Consensus 173 g~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~--~~~g~~~ 246 (367)
T 1cm8_A 173 GLARQADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIM--KVTGTPP 246 (367)
T ss_dssp TTCEECCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--HHHCCCC
T ss_pred ecccccccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH--HhcCCCC
Confidence 999875432 334578999999999887 679999999999999999999999998766443322211 1000000
Q ss_pred ccccc------------ccC--cccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 823 DSFHK------------AID--PTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 823 ~~~~~------------~~~--~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
..+.. .+. +..............+.+++.+|++.||++|||+.+++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 247 AEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp HHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 00000 000 0000011111234568899999999999999999999874
No 168
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.7e-38 Score=342.51 Aligned_cols=251 Identities=25% Similarity=0.458 Sum_probs=184.3
Q ss_pred hcCCcccceecccCceEEEEEEE-cCCcEEEEEEeecCcCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVIS-GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 669 (948)
.++|++.+.||+|+||.||+|+. .+|+.||||++...... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 46799999999999999999987 47899999998754221 22347789999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceec
Q 002238 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (948)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~ 749 (948)
|||+++++|.+++.. ....+++..++.++.|+++||+|||+ .+|+||||||+||+++.++.+||+|||++...
T Consensus 90 ~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~ 162 (278)
T 3cok_A 90 LEMCHNGEMNRYLKN----RVKPFSENEARHFMHQIITGMLYLHS---HGILHRDLTLSNLLLTRNMNIKIADFGLATQL 162 (278)
T ss_dssp EECCTTEEHHHHHHT----CSSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSSCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EecCCCCcHHHHHhh----ccCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEEeecceeec
Confidence 999999999998843 33578999999999999999999997 89999999999999999999999999999866
Q ss_pred CCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCcccccccc
Q 002238 750 PEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHKAI 829 (948)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 829 (948)
..... ......||+.|+|||++.+..++.++||||||+++|||++|+.||......+.. ... .
T Consensus 163 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~------~~~----------~ 225 (278)
T 3cok_A 163 KMPHE-KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL------NKV----------V 225 (278)
T ss_dssp C-----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----------C----------C
T ss_pred cCCCC-cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH------HHH----------h
Confidence 43322 223456899999999999989999999999999999999999999865432211 000 0
Q ss_pred CcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 830 DPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 830 ~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
....... .....++.+++.+|++.||++||+++++++
T Consensus 226 ~~~~~~~---~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 226 LADYEMP---SFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp SSCCCCC---TTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hcccCCc---cccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 0001101 112345889999999999999999999876
No 169
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=2.5e-38 Score=354.54 Aligned_cols=260 Identities=26% Similarity=0.393 Sum_probs=209.3
Q ss_pred HHHHHHhhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCC--h----hhHHHHHHHHHHHHhc-CCCceeeE
Q 002238 585 IQVLRNVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS--G----KGLTEFKSEIAVLTKV-RHRHLVAL 656 (948)
Q Consensus 585 ~~~l~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~--~----~~~~~~~~E~~~l~~l-~H~niv~l 656 (948)
........++|++.+.||+|+||.||+|.++ +|+.||||++...... . ...+.+.+|+.+++++ +||||+++
T Consensus 86 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 165 (365)
T 2y7j_A 86 WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITL 165 (365)
T ss_dssp HHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred chhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 4455666788999999999999999999985 7999999998764321 1 1245688999999999 89999999
Q ss_pred EeEEEeCCceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCC
Q 002238 657 LGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM 736 (948)
Q Consensus 657 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~ 736 (948)
++++......++||||+++++|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+||+++.++
T Consensus 166 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~-----~~~l~~~~~~~i~~qi~~~L~~LH~---~gi~H~Dlkp~NIl~~~~~ 237 (365)
T 2y7j_A 166 IDSYESSSFMFLVFDLMRKGELFDYLTE-----KVALSEKETRSIMRSLLEAVSFLHA---NNIVHRDLKPENILLDDNM 237 (365)
T ss_dssp EEEEEBSSEEEEEECCCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTC
T ss_pred EEEEeeCCEEEEEEEeCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCC
Confidence 9999999999999999999999998853 1468999999999999999999997 7999999999999999999
Q ss_pred CeEEeecCCceecCCCCCceeeeecccccccCceeccc------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhh
Q 002238 737 RAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVT------GRVTTKVDVFSFGVILMELITGRKALDESQPEESMH 810 (948)
Q Consensus 737 ~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~ 810 (948)
.++|+|||++....... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..........
T Consensus 238 ~ikl~DfG~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~ 315 (365)
T 2y7j_A 238 QIRLSDFGFSCHLEPGE--KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLR 315 (365)
T ss_dssp CEEECCCTTCEECCTTC--CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred CEEEEecCcccccCCCc--ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHH
Confidence 99999999998765432 2344679999999999863 358899999999999999999999998755432211
Q ss_pred HHHHHHHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 811 LVTWFRRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 811 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
.+ .. ...... ..........+.+++.+|++.||++||++.++++
T Consensus 316 ~i---~~---~~~~~~---------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 316 MI---ME---GQYQFS---------SPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp HH---HH---TCCCCC---------HHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HH---Hh---CCCCCC---------CcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11 11 010000 0001122345889999999999999999999987
No 170
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=2.8e-38 Score=349.37 Aligned_cols=263 Identities=31% Similarity=0.482 Sum_probs=207.9
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEE--EEEEeecCcCChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCceE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKI--AVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKL 667 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~v--avK~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~ 667 (948)
.++|++.+.||+|+||.||+|+.. ++..+ |||++... ......+.+.+|+++++++ +||||+++++++.+.+..+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 102 (327)
T 1fvr_A 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 102 (327)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccc-cchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceE
Confidence 367899999999999999999865 56644 99988753 2344556799999999999 9999999999999999999
Q ss_pred EEEEecCCCChhHHHHhhh-----------hcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCC
Q 002238 668 LVFEYMPQGTLSRHIFNWA-----------EEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM 736 (948)
Q Consensus 668 lv~e~~~~gsL~~~l~~~~-----------~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~ 736 (948)
+||||+++|+|.+++.... ......+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~ 179 (327)
T 1fvr_A 103 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENY 179 (327)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGG
T ss_pred EEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCccceEEEcCCC
Confidence 9999999999999986421 0123578999999999999999999997 8999999999999999999
Q ss_pred CeEEeecCCceecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchhhhhHHHHH
Q 002238 737 RAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDESQPEESMHLVTWF 815 (948)
Q Consensus 737 ~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~ 815 (948)
.+||+|||+++...... ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||......+...
T Consensus 180 ~~kL~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~----- 252 (327)
T 1fvr_A 180 VAKIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYE----- 252 (327)
T ss_dssp CEEECCTTCEESSCEEC--CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH-----
T ss_pred eEEEcccCcCccccccc--cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHH-----
Confidence 99999999987432211 1233457889999999999899999999999999999998 999998765433211
Q ss_pred HHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhhh
Q 002238 816 RRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELW 878 (948)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~~ 878 (948)
.... . ..... .......+.+++.+|++.+|.+||++.++++.|+.+....
T Consensus 253 -~~~~--~-----~~~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 302 (327)
T 1fvr_A 253 -KLPQ--G-----YRLEK-----PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 302 (327)
T ss_dssp -HGGG--T-----CCCCC-----CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred -Hhhc--C-----CCCCC-----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhh
Confidence 1111 0 00000 1122346889999999999999999999999999987654
No 171
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=7.8e-39 Score=353.84 Aligned_cols=268 Identities=21% Similarity=0.293 Sum_probs=196.0
Q ss_pred HhhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEE
Q 002238 590 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLL 668 (948)
Q Consensus 590 ~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 668 (948)
...++|++.+.||+|+||.||+|... +++.||||++............+.+|++++++++||||+++++++.+++..++
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence 34578999999999999999999864 78999999997654444445678899999999999999999999999999999
Q ss_pred EEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEc-----CCCCeEEeec
Q 002238 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLG-----DDMRAKVADF 743 (948)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~-----~~~~~kl~Df 743 (948)
||||++ |+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++ .++.+||+||
T Consensus 111 v~e~~~-~~L~~~~~~-----~~~~~~~~~~~i~~ql~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Df 181 (329)
T 3gbz_A 111 IFEYAE-NDLKKYMDK-----NPDVSMRVIKSFLYQLINGVNFCHS---RRCLHRDLKPQNLLLSVSDASETPVLKIGDF 181 (329)
T ss_dssp EEECCS-EEHHHHHHH-----CTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEC-----CCEEEECCT
T ss_pred EEecCC-CCHHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCEECCCCCHHHEEEecCCCCccceEEECcC
Confidence 999997 599888843 2468999999999999999999997 8999999999999994 4455999999
Q ss_pred CCceecCCCCCceeeeecccccccCceecccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCc
Q 002238 744 GLVRLAPEGKGSIETRIAGTFGYLAPEYAVTG-RVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSK 822 (948)
Q Consensus 744 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 822 (948)
|+++....... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||......+....+ ........
T Consensus 182 g~a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~--~~~~~~~~ 258 (329)
T 3gbz_A 182 GLARAFGIPIR-QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKI--FEVLGLPD 258 (329)
T ss_dssp THHHHHC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH--HHHHCCCC
T ss_pred CCccccCCccc-ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHH--HHHhCCCc
Confidence 99986543322 23445689999999999875 4899999999999999999999999876554332221 11111111
Q ss_pred cc-ccc------ccC--cccCCc----cchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 823 DS-FHK------AID--PTIDLN----EGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 823 ~~-~~~------~~~--~~~~~~----~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
.. +.. ... +..... ........++.+++.+|++.||++|||++|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 259 DTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp TTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 00 000 000 000000 000112356889999999999999999999976
No 172
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=2.3e-38 Score=341.41 Aligned_cols=253 Identities=29% Similarity=0.459 Sum_probs=201.0
Q ss_pred hcCCcccceecccCceEEEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC-CceEEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG-NEKLLVF 670 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-~~~~lv~ 670 (948)
.++|++.+.||+|+||.||+|+.+ |+.||||+++.. ...+.+.+|++++++++||||+++++++.+. +..++||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~ 94 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 94 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCC----C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecch----hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEE
Confidence 467899999999999999999876 899999998753 2457799999999999999999999997654 4789999
Q ss_pred EecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceecC
Q 002238 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 750 (948)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~~ 750 (948)
||+++|+|.+++.... ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.++|+|||+++...
T Consensus 95 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 168 (278)
T 1byg_A 95 EYMAKGSLVDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 168 (278)
T ss_dssp CCCTTEEHHHHHHHHH---HHHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC-----
T ss_pred ecCCCCCHHHHHHhcc---cccCCHHHHHHHHHHHHHHHHHHHh---CCccccCCCcceEEEeCCCcEEEeecccccccc
Confidence 9999999999986422 1347899999999999999999997 899999999999999999999999999988544
Q ss_pred CCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHhhcCcccccccc
Q 002238 751 EGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDESQPEESMHLVTWFRRIHLSKDSFHKAI 829 (948)
Q Consensus 751 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 829 (948)
.. .....+++.|+|||++.+..++.++||||||+++|||++ |+.||......+.... .. .. .
T Consensus 169 ~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~------~~--~~-~---- 231 (278)
T 1byg_A 169 ST----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR------VE--KG-Y---- 231 (278)
T ss_dssp -----------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHH------HT--TT-C----
T ss_pred cc----ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH------Hh--cC-C----
Confidence 32 123357899999999999999999999999999999998 9999987654332111 11 00 0
Q ss_pred CcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhh
Q 002238 830 DPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVEL 877 (948)
Q Consensus 830 ~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~ 877 (948)
.... ....+..+.+++.+|++.||++||++.++++.|+.+...
T Consensus 232 ~~~~-----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 232 KMDA-----PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp CCCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCC-----cccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence 0011 112234688999999999999999999999999998654
No 173
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=5.6e-39 Score=370.24 Aligned_cols=251 Identities=26% Similarity=0.376 Sum_probs=196.9
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 669 (948)
.++|++.+.||+|+||.||+|... +|+.||||++..... .......+.+|+++++.++||||+++++++.+.+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 467999999999999999999865 789999999976422 334456788999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceec
Q 002238 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (948)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~ 749 (948)
|||+++|+|.+++.. ...+++..+..++.||+.||+|||+ ..+|+||||||+|||++.++.+||+|||+++..
T Consensus 227 ~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~--~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 299 (446)
T 4ejn_A 227 MEYANGGELFFHLSR-----ERVFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEG 299 (446)
T ss_dssp ECCCSSCBHHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHH--HTCCCCCCCCGGGEEECSSSCEEECCCCCCCTT
T ss_pred EeeCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHhh--cCCEEECCCCHHHEEECCCCCEEEccCCCceec
Confidence 999999999988843 1468999999999999999999995 278999999999999999999999999999854
Q ss_pred CCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCcccccccc
Q 002238 750 PEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHKAI 829 (948)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 829 (948)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...........+ ......+.
T Consensus 300 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i------~~~~~~~p--- 369 (446)
T 4ejn_A 300 IKDG-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI------LMEEIRFP--- 369 (446)
T ss_dssp CC------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH------HHCCCCCC---
T ss_pred cCCC-cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHH------HhCCCCCC---
Confidence 3322 2234567999999999999999999999999999999999999999876543322211 11111111
Q ss_pred CcccCCccchHHHHHHHHHHHHHhcccCCCCCC-----ChHHHHH
Q 002238 830 DPTIDLNEGILASISTVAELAGHCCAREPYQRP-----DMGHAVN 869 (948)
Q Consensus 830 ~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RP-----t~~ev~~ 869 (948)
. ....++.+++.+|++.||.+|| +++|+++
T Consensus 370 -~---------~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 370 -R---------TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp -T---------TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred -c---------cCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 1 1224588999999999999999 9988876
No 174
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=3.2e-38 Score=365.54 Aligned_cols=270 Identities=23% Similarity=0.315 Sum_probs=189.0
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC-----Cc
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG-----NE 665 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~ 665 (948)
.++|++.+.||+|+||.||+|..+ +|+.||||++..........+.+.+|+++++.++||||+++++++... ..
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 478999999999999999999865 789999999976554556678899999999999999999999998543 56
Q ss_pred eEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCC
Q 002238 666 KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGL 745 (948)
Q Consensus 666 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGl 745 (948)
.|+||||+ +|+|.+++.. ...+++..+..++.||+.||+|||+ .+||||||||+|||++.++.+||+|||+
T Consensus 132 ~~lv~e~~-~~~L~~~~~~-----~~~l~~~~~~~~~~qi~~aL~~LH~---~~iiHrDlKp~NILl~~~~~~kl~DFGl 202 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFRT-----PVYLTELHIKTLLYNLLVGVKYVHS---AGILHRDLKPANCLVNQDCSVKVCDFGL 202 (458)
T ss_dssp EEEEECCC-SEEHHHHHHS-----SCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEEecc-ccchhhhccc-----CCCCCHHHHHHHHHHHHHHHHHHHh---CCcCCCCCChhhEEECCCCCEeeccccc
Confidence 89999998 5789888732 3579999999999999999999997 8999999999999999999999999999
Q ss_pred ceecCCCCC--------------------------ceeeeecccccccCceec-ccCCCCchhhHHHHHHHHHHHHh---
Q 002238 746 VRLAPEGKG--------------------------SIETRIAGTFGYLAPEYA-VTGRVTTKVDVFSFGVILMELIT--- 795 (948)
Q Consensus 746 a~~~~~~~~--------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~s~Gv~l~ellt--- 795 (948)
++....... ...+..+||+.|+|||++ ....++.++|||||||++|||++
T Consensus 203 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~ 282 (458)
T 3rp9_A 203 ARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIK 282 (458)
T ss_dssp CBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTST
T ss_pred chhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcc
Confidence 986542211 123446789999999986 45679999999999999999999
Q ss_pred --------CCCCCCCCCchh-----------------hhhHHHHHHHhhc-Cccc------------cccccC--cccCC
Q 002238 796 --------GRKALDESQPEE-----------------SMHLVTWFRRIHL-SKDS------------FHKAID--PTIDL 835 (948)
Q Consensus 796 --------g~~p~~~~~~~~-----------------~~~~~~~~~~~~~-~~~~------------~~~~~~--~~~~~ 835 (948)
|+++|.+..... .......+..... .... +...+. .....
T Consensus 283 ~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (458)
T 3rp9_A 283 ENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDL 362 (458)
T ss_dssp TTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCG
T ss_pred ccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCH
Confidence 666665432100 0000010100000 0000 000000 00011
Q ss_pred ccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 836 NEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 836 ~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
.........++.+|+.+|++.||++|||++|++++
T Consensus 363 ~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~H 397 (458)
T 3rp9_A 363 AERFPASSADAIHLLKRMLVFNPNKRITINECLAH 397 (458)
T ss_dssp GGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 11112224568899999999999999999999874
No 175
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=4.1e-38 Score=346.30 Aligned_cols=259 Identities=24% Similarity=0.331 Sum_probs=197.7
Q ss_pred hcCCccc-ceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCceEE
Q 002238 592 TNNFSEE-NILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKLL 668 (948)
Q Consensus 592 ~~~~~~~-~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~l 668 (948)
.++|++. +.||+|+||.||+|... +++.||||++... .....+.+.+|++++.++ +||||+++++++.+++..++
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~l 88 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQ--PGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYL 88 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECC--SSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeC--cchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEE
Confidence 4578774 78999999999999864 7899999999764 334467899999999985 79999999999999999999
Q ss_pred EEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCC---eEEeecCC
Q 002238 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR---AKVADFGL 745 (948)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~---~kl~DfGl 745 (948)
||||+++|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+|||+
T Consensus 89 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~ 160 (316)
T 2ac3_A 89 VFEKMRGGSILSHIHKR-----RHFNELEASVVVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFDL 160 (316)
T ss_dssp EEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESCSSSSCSEEECCTTC
T ss_pred EEEcCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEEccCCCcCceEEEEccC
Confidence 99999999999998541 468999999999999999999997 79999999999999998776 99999999
Q ss_pred ceecCCCCC------ceeeeecccccccCceeccc-----CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhh----
Q 002238 746 VRLAPEGKG------SIETRIAGTFGYLAPEYAVT-----GRVTTKVDVFSFGVILMELITGRKALDESQPEESMH---- 810 (948)
Q Consensus 746 a~~~~~~~~------~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~---- 810 (948)
++....... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~ 240 (316)
T 2ac3_A 161 GSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGE 240 (316)
T ss_dssp CC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----
T ss_pred ccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccc
Confidence 875432211 11223569999999999875 568899999999999999999999998754322000
Q ss_pred -----HHHHHHHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 811 -----LVTWFRRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 811 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
.......+......+ + .........++.+++.+|++.||++||++.|+++
T Consensus 241 ~~~~~~~~~~~~i~~~~~~~--------~-~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 241 ACPACQNMLFESIQEGKYEF--------P-DKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp CCHHHHHHHHHHHHHCCCCC--------C-HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred cchhHHHHHHHHHhccCccc--------C-chhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 000111111101000 0 0001122346889999999999999999999987
No 176
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.6e-38 Score=370.74 Aligned_cols=254 Identities=26% Similarity=0.350 Sum_probs=206.6
Q ss_pred hhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEE
Q 002238 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 669 (948)
..++|++.+.||+|+||.||+|..+ +++.||||++............+.+|++++++++||||+++++++.+....++|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 4568999999999999999999875 789999999976543444567899999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEc---CCCCeEEeecCCc
Q 002238 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLG---DDMRAKVADFGLV 746 (948)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~---~~~~~kl~DfGla 746 (948)
|||+++|+|.+.+... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++ .++.+||+|||++
T Consensus 100 ~e~~~~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a 171 (486)
T 3mwu_A 100 GELYTGGELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLS 171 (486)
T ss_dssp ECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEESSSSTTCCEEECSCSCT
T ss_pred EEcCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEEECCcC
Confidence 9999999999888541 468999999999999999999997 8999999999999995 4567999999999
Q ss_pred eecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCccccc
Q 002238 747 RLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFH 826 (948)
Q Consensus 747 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 826 (948)
+...... ......||+.|+|||++.+ .++.++||||+||++|||++|+.||.+....+....+ ......+.
T Consensus 172 ~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i------~~~~~~~~ 242 (486)
T 3mwu_A 172 TCFQQNT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV------ETGKYAFD 242 (486)
T ss_dssp TTBCCC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH------HHTCCCSC
T ss_pred eECCCCC--ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH------HhCCCCCC
Confidence 8654432 2344579999999999875 5999999999999999999999999876544322211 11111000
Q ss_pred cccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 827 KAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
...+......+.+++.+|++.||.+|||+.++++.
T Consensus 243 ---------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 243 ---------LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp ---------SGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred ---------CcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 01112233568899999999999999999999885
No 177
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.9e-38 Score=348.94 Aligned_cols=267 Identities=24% Similarity=0.423 Sum_probs=209.8
Q ss_pred hcCCcccceecccCceEEEEEEE-----cCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC--
Q 002238 592 TNNFSEENILGRGGFGTVYKGEL-----HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGN-- 664 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-- 664 (948)
.++|++.+.||+|+||.||+|++ .+|+.||||++... .....+.+.+|++++++++||||+++++++...+
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 117 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 117 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC--CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCC
Confidence 45788999999999999999984 36899999998764 4455678999999999999999999999987654
Q ss_pred ceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecC
Q 002238 665 EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 744 (948)
Q Consensus 665 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfG 744 (948)
..++||||+++++|.+++.. ....+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 118 ~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kL~Dfg 190 (326)
T 2w1i_A 118 NLKLIMEYLPYGSLRDYLQK----HKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFG 190 (326)
T ss_dssp CCEEEECCCTTCBHHHHHHH----STTSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCT
T ss_pred ceEEEEECCCCCCHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCCcceEEEcCCCcEEEecCc
Confidence 67999999999999999854 23568999999999999999999997 899999999999999999999999999
Q ss_pred CceecCCCCCce--eeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhh---------hhHHH
Q 002238 745 LVRLAPEGKGSI--ETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEES---------MHLVT 813 (948)
Q Consensus 745 la~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~---------~~~~~ 813 (948)
+++......... .....+|..|+|||++.+..++.++||||||+++|||++|..|+......-. .....
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (326)
T 2w1i_A 191 LTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF 270 (326)
T ss_dssp TCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHH
T ss_pred chhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHH
Confidence 998765543321 2234577889999999999999999999999999999999998864211000 00000
Q ss_pred HHHHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhhh
Q 002238 814 WFRRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELW 878 (948)
Q Consensus 814 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~~ 878 (948)
.......... ... .....+.++.+++.+|++.||++||++.++++.|+.+.+..
T Consensus 271 ~~~~~~~~~~--------~~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l 324 (326)
T 2w1i_A 271 HLIELLKNNG--------RLP---RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQM 324 (326)
T ss_dssp HHHHHHHTTC--------CCC---CCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHhhcCC--------CCC---CCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence 0001000000 000 01123356889999999999999999999999999987653
No 178
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.9e-38 Score=370.58 Aligned_cols=254 Identities=26% Similarity=0.356 Sum_probs=202.6
Q ss_pred hhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEE
Q 002238 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 669 (948)
+.++|++.+.||+|+||.||+|+.+ +++.||||++............+.+|+.+++.++||||+++++++.+....++|
T Consensus 35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 114 (494)
T 3lij_A 35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV 114 (494)
T ss_dssp HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 3567999999999999999999875 789999999987654455567899999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCC---CCeEEeecCCc
Q 002238 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD---MRAKVADFGLV 746 (948)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~---~~~kl~DfGla 746 (948)
|||+++|+|.+.+... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.. +.+||+|||++
T Consensus 115 ~e~~~~g~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a 186 (494)
T 3lij_A 115 MECYKGGELFDEIIHR-----MKFNEVDAAVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLS 186 (494)
T ss_dssp EECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChhhEEEeCCCCCCcEEEEECCCC
Confidence 9999999999888541 468999999999999999999997 899999999999999764 45999999999
Q ss_pred eecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCccccc
Q 002238 747 RLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFH 826 (948)
Q Consensus 747 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 826 (948)
+...... ......||+.|+|||++. +.++.++||||+||++|||++|+.||......+....+ ......+.
T Consensus 187 ~~~~~~~--~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i------~~~~~~~~ 257 (494)
T 3lij_A 187 AVFENQK--KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKV------EKGKYTFD 257 (494)
T ss_dssp EECBTTB--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH------HHTCCCCC
T ss_pred eECCCCc--cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH------HhCCCCCC
Confidence 8765432 234467999999999876 56999999999999999999999999876654332211 11111110
Q ss_pred cccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 827 KAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
...+......+.+++.+|++.+|.+|||+.+++++
T Consensus 258 ---------~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 258 ---------SPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp ---------SGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred ---------chhcccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 01111223468899999999999999999999864
No 179
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=3.9e-38 Score=351.83 Aligned_cols=269 Identities=22% Similarity=0.330 Sum_probs=204.8
Q ss_pred hcCCcccceecccCceEEEEEEE-cCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEe--------
Q 002238 592 TNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLD-------- 662 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-------- 662 (948)
.++|++.+.||+|+||.||+|+. .+|+.||||++............+.+|+++++.++||||+++++++.+
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 36799999999999999999987 478999999987664444455778899999999999999999999987
Q ss_pred CCceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEee
Q 002238 663 GNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVAD 742 (948)
Q Consensus 663 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~D 742 (948)
.+..++||||+++ +|.+.+.. ....+++.+++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~----~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~kl~D 167 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSN----VLVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLAD 167 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHC----TTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECC
T ss_pred CceEEEEEeccCC-CHHHHHhh----ccCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCCEEEcc
Confidence 3467999999975 77776633 23568999999999999999999997 8999999999999999999999999
Q ss_pred cCCceecCCCCC---ceeeeecccccccCceeccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHh
Q 002238 743 FGLVRLAPEGKG---SIETRIAGTFGYLAPEYAVT-GRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRI 818 (948)
Q Consensus 743 fGla~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 818 (948)
||+++....... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........+......
T Consensus 168 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~ 247 (351)
T 3mi9_A 168 FGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGS 247 (351)
T ss_dssp CTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred chhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC
Confidence 999986543221 22344578999999999876 45899999999999999999999999887654433332211111
Q ss_pred hcCccccccc--------cCcccCCccchHH------HHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 819 HLSKDSFHKA--------IDPTIDLNEGILA------SISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 819 ~~~~~~~~~~--------~~~~~~~~~~~~~------~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
.. ...+... +............ ....+.+++.+|++.||++||+++|+++
T Consensus 248 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 248 IT-PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp CC-TTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CC-hhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 00 0000000 0000000000000 1245889999999999999999999987
No 180
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=3.3e-38 Score=367.02 Aligned_cols=253 Identities=27% Similarity=0.410 Sum_probs=204.8
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS-GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 669 (948)
.++|+..+.||+|+||.||+|+.+ +|+.||||++.+.... ......+.+|++++++++||||+++++++.+.+..|+|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 367999999999999999999875 6999999999764322 23456789999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceec
Q 002238 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (948)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~ 749 (948)
|||++||+|.+++.... .....+++..++.++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 264 mE~~~gg~L~~~l~~~~-~~~~~l~e~~~~~~~~qi~~aL~~LH~---~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~ 339 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVD-EDNPGFQEPRAIFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVEL 339 (543)
T ss_dssp ECCCTTCBHHHHHHTSS-TTSCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEeccCCCHHHHHHHhh-cccccccHHHHHHHHHHHHHHHHHHHH---cCCcccCCChHHEEEeCCCCEEEeecceeeec
Confidence 99999999999885422 123569999999999999999999997 89999999999999999999999999999876
Q ss_pred CCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCcccccccc
Q 002238 750 PEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHKAI 829 (948)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 829 (948)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......... ......+......+
T Consensus 340 ~~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~--~~~~~~i~~~~~~~---- 412 (543)
T 3c4z_A 340 KAGQT-KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVEN--KELKQRVLEQAVTY---- 412 (543)
T ss_dssp CTTCC-CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCH--HHHHHHHHHCCCCC----
T ss_pred cCCCc-ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhH--HHHHHHHhhcccCC----
Confidence 54432 233457999999999999999999999999999999999999999875432111 11111111111111
Q ss_pred CcccCCccchHHHHHHHHHHHHHhcccCCCCCCCh
Q 002238 830 DPTIDLNEGILASISTVAELAGHCCAREPYQRPDM 864 (948)
Q Consensus 830 ~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~ 864 (948)
. ......+.+++.+|++.||.+||++
T Consensus 413 p---------~~~s~~~~~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 413 P---------DKFSPASKDFCEALLQKDPEKRLGF 438 (543)
T ss_dssp C---------TTSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred C---------cccCHHHHHHHHHhccCCHhHCCCC
Confidence 1 1123458899999999999999976
No 181
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.9e-39 Score=357.87 Aligned_cols=257 Identities=24% Similarity=0.335 Sum_probs=203.5
Q ss_pred hcCCcccceecccCceEEEEEEE----cCCcEEEEEEeecCcC--ChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCC
Q 002238 592 TNNFSEENILGRGGFGTVYKGEL----HDGTKIAVKRMEAGVI--SGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGN 664 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~----~~g~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~ 664 (948)
.++|++.+.||+|+||.||+|+. .+|+.||||+++.... .......+.+|+++++.+ +||||+++++++.+++
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 36799999999999999999987 3689999999865321 122345678899999999 6999999999999999
Q ss_pred ceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecC
Q 002238 665 EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 744 (948)
Q Consensus 665 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfG 744 (948)
..++||||+++|+|.+++... ..+++.++..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DfG 204 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQR-----ERFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFG 204 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEESCSS
T ss_pred eEEEEeecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCcEEEeeCC
Confidence 999999999999999998541 468999999999999999999997 799999999999999999999999999
Q ss_pred CceecCCCCCceeeeecccccccCceeccc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCc
Q 002238 745 LVRLAPEGKGSIETRIAGTFGYLAPEYAVT--GRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSK 822 (948)
Q Consensus 745 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 822 (948)
+++..............||+.|+|||++.+ ..++.++|||||||++|||++|+.||.......... ..........
T Consensus 205 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~--~~~~~~~~~~ 282 (355)
T 1vzo_A 205 LSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQA--EISRRILKSE 282 (355)
T ss_dssp EEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHH--HHHHHHHHCC
T ss_pred CCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHH--HHHHHHhccC
Confidence 998665443333445679999999999986 347899999999999999999999997644322211 1111111111
Q ss_pred cccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCC-----ChHHHHHHH
Q 002238 823 DSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRP-----DMGHAVNVL 871 (948)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RP-----t~~ev~~~L 871 (948)
.. .. ......+.+++.+|++.||.+|| ++.++++..
T Consensus 283 ~~----~~---------~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 283 PP----YP---------QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp CC----CC---------TTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred CC----CC---------cccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 10 01 11224578999999999999999 888887743
No 182
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=8e-38 Score=339.00 Aligned_cols=249 Identities=23% Similarity=0.333 Sum_probs=202.8
Q ss_pred hhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCceEE
Q 002238 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKLL 668 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~l 668 (948)
..++|++.+.||+|+||.||+|... +++.||||++...........++.+|+..+..+ +||||+++++++.+++..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 4578999999999999999999876 799999999987655556678899999999999 99999999999999999999
Q ss_pred EEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCC-------------
Q 002238 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD------------- 735 (948)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~------------- 735 (948)
||||+++|+|.+++..... ....+++.+++.++.|++.||+|||+ .+|+||||||+||+++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~ 164 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYR-IMSYFKEAELKDLLLQVGRGLRYIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDED 164 (289)
T ss_dssp EEECCTTCBHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEC---------------
T ss_pred EEEecCCCcHHHHHHhhcc-cccCCCHHHHHHHHHHHHHHHHHHHh---CCEeecCCCHHHEEEcCCCCCcccccccccc
Confidence 9999999999999865332 22568999999999999999999997 899999999999999844
Q ss_pred ------CCeEEeecCCceecCCCCCceeeeecccccccCceecccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCchhh
Q 002238 736 ------MRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTG-RVTTKVDVFSFGVILMELITGRKALDESQPEES 808 (948)
Q Consensus 736 ------~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~ 808 (948)
..+||+|||++....... ...||+.|+|||++.+. .++.++||||||+++|||++|.+++......
T Consensus 165 ~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~-- 237 (289)
T 1x8b_A 165 DWASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQW-- 237 (289)
T ss_dssp -----CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHH--
T ss_pred cccCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHH--
Confidence 479999999998765432 23589999999999776 5678999999999999999998876543211
Q ss_pred hhHHHHHHHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 809 MHLVTWFRRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
. ... .... +.++ ......+.+++.+|++.||++||++.++++
T Consensus 238 ----~---~~~--~~~~-----~~~~-----~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 238 ----H---EIR--QGRL-----PRIP-----QVLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp ----H---HHH--TTCC-----CCCS-----SCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ----H---HHH--cCCC-----CCCC-----cccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 0 010 1111 1111 112245889999999999999999999976
No 183
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=350.67 Aligned_cols=263 Identities=26% Similarity=0.351 Sum_probs=205.2
Q ss_pred hcCCcccceecccCceEEEEEEE-cCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEe----CCce
Q 002238 592 TNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLD----GNEK 666 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~ 666 (948)
.++|++.+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|+++++.++||||+++++++.. ....
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 105 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH--EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEA 105 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES--SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC--CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCcee
Confidence 46799999999999999999987 57899999998754 45566789999999999999999999999873 3467
Q ss_pred EEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCc
Q 002238 667 LLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLV 746 (948)
Q Consensus 667 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla 746 (948)
++||||+++|+|.+++..... ....+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 106 ~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~dfg~~ 181 (317)
T 2buj_A 106 WLLLPFFKRGTLWNEIERLKD-KGNFLTEDQILWLLLGICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGSM 181 (317)
T ss_dssp EEEEECCTTCBHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred EEEEEeCCCCcHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCCEEEEecCcc
Confidence 999999999999999865332 34679999999999999999999997 79999999999999999999999999998
Q ss_pred eecCCCCCc--------eeeeecccccccCceecccCC---CCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHH
Q 002238 747 RLAPEGKGS--------IETRIAGTFGYLAPEYAVTGR---VTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWF 815 (948)
Q Consensus 747 ~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~ 815 (948)
+........ ......||+.|+|||++.+.. ++.++||||||+++|||++|+.||........ ......
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~~~ 260 (317)
T 2buj_A 182 NQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD-SVALAV 260 (317)
T ss_dssp EESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTS-CHHHHH
T ss_pred hhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccc-hhhHHh
Confidence 754321110 012245799999999987654 68999999999999999999999954211110 000000
Q ss_pred HHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhh
Q 002238 816 RRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVE 876 (948)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~ 876 (948)
.. .... + ........+.+++.+|++.||.+||++.++++.|+.+..
T Consensus 261 ~~----~~~~--------~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~ 306 (317)
T 2buj_A 261 QN----QLSI--------P---QSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP 306 (317)
T ss_dssp HC----C--C--------C---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred hc----cCCC--------C---ccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence 00 0000 0 001123468899999999999999999999999998753
No 184
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=7e-39 Score=353.43 Aligned_cols=266 Identities=24% Similarity=0.344 Sum_probs=197.3
Q ss_pred cCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEEEE
Q 002238 593 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFE 671 (948)
Q Consensus 593 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 671 (948)
++|++.+.||+|+||.||+|+.. +++.||||++.... .......+.+|++++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEH-EEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE 80 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC-------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccc-ccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEec
Confidence 57899999999999999999876 78999999986542 11222345679999999999999999999999999999999
Q ss_pred ecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceecCC
Q 002238 672 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE 751 (948)
Q Consensus 672 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~~~ 751 (948)
|++ |+|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 81 ~~~-~~l~~~~~~----~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 152 (324)
T 3mtl_A 81 YLD-KDLKQYLDD----CGNIINMHNVKLFLFQLLRGLAYCHR---QKVLHRDLKPQNLLINERGELKLADFGLARAKSI 152 (324)
T ss_dssp CCS-EEHHHHHHH----TTTCCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCCGGGEEECTTCCEEECSSSEEECC--
T ss_pred ccc-cCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCcCHHHEEECCCCCEEEccCcccccccC
Confidence 997 588888743 23568999999999999999999997 8999999999999999999999999999986543
Q ss_pred CCCceeeeecccccccCceeccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCccccccccC
Q 002238 752 GKGSIETRIAGTFGYLAPEYAVT-GRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHKAID 830 (948)
Q Consensus 752 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 830 (948)
... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+....+........ ...+.....
T Consensus 153 ~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~ 230 (324)
T 3mtl_A 153 PTK-TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPT-EETWPGILS 230 (324)
T ss_dssp -----------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC-TTTSTTGGG
T ss_pred Ccc-ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC-hHhchhhhc
Confidence 322 2334568999999999876 5689999999999999999999999988765443322211110000 000000000
Q ss_pred ---------cccCC---ccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 831 ---------PTIDL---NEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 831 ---------~~~~~---~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
+.... .........++.+++.+|++.||.+|||++|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 231 NEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp CHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred chhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 00000 0001122356889999999999999999999987
No 185
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=3.7e-38 Score=339.48 Aligned_cols=254 Identities=24% Similarity=0.372 Sum_probs=205.7
Q ss_pred hhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEE
Q 002238 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 669 (948)
..++|++.+.||+|+||.||+|... +++.||||++.... .....+.+.+|+.+++.++||||+++++++.+++..++|
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 83 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGG-CTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeecc-chhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEE
Confidence 3467999999999999999999875 78999999987543 234457899999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceec
Q 002238 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (948)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~ 749 (948)
|||+++++|.+++. ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.++|+|||++...
T Consensus 84 ~e~~~~~~L~~~l~-----~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 155 (276)
T 2yex_A 84 LEYCSGGELFDRIE-----PDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF 155 (276)
T ss_dssp EECCTTEEGGGGSB-----TTTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEecCCCcHHHHHh-----hccCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCChHHEEEccCCCEEEeeCCCcccc
Confidence 99999999998873 23568999999999999999999997 89999999999999999999999999999865
Q ss_pred CCCC-CceeeeecccccccCceecccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCcccccc
Q 002238 750 PEGK-GSIETRIAGTFGYLAPEYAVTGRV-TTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHK 827 (948)
Q Consensus 750 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 827 (948)
.... ........||+.|+|||++.+..+ +.++||||||+++|||++|+.||........ ....+.. ....
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~----~~~~--- 227 (276)
T 2yex_A 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-EYSDWKE----KKTY--- 227 (276)
T ss_dssp EETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH-HHHHHHT----TCTT---
T ss_pred CCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH-HHHHhhh----cccc---
Confidence 4322 122334578999999999987765 7899999999999999999999987553221 1111111 0000
Q ss_pred ccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 828 AIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
.. ........+.+++.+|++.||++||++.++++
T Consensus 228 -~~-------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 228 -LN-------PWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp -ST-------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -cC-------chhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 00 01122345889999999999999999999876
No 186
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.1e-37 Score=340.77 Aligned_cols=252 Identities=25% Similarity=0.449 Sum_probs=209.3
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 670 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 670 (948)
.+.|+..+.||+|+||.||+|... +++.||||++.... .....+.+.+|+.+++.++||||+++++++.++...++||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 99 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE-AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM 99 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTT-CSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccc-cHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEE
Confidence 467899999999999999999864 68999999997653 2345688999999999999999999999999999999999
Q ss_pred EecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceecC
Q 002238 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 750 (948)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~~ 750 (948)
||+++++|.+++.. ..+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.++|+|||++....
T Consensus 100 e~~~~~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~ 170 (303)
T 3a7i_A 100 EYLGGGSALDLLEP------GPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT 170 (303)
T ss_dssp ECCTTEEHHHHHTT------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECB
T ss_pred EeCCCCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChheEEECCCCCEEEeecccceecC
Confidence 99999999998832 468999999999999999999997 899999999999999999999999999998665
Q ss_pred CCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCccccccccC
Q 002238 751 EGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHKAID 830 (948)
Q Consensus 751 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 830 (948)
.... ......||+.|+|||++.+..++.++||||||+++|||++|+.||...........+ .. .. .
T Consensus 171 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~---~~-----~~-----~ 236 (303)
T 3a7i_A 171 DTQI-KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI---PK-----NN-----P 236 (303)
T ss_dssp TTBC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH---HH-----SC-----C
T ss_pred cccc-ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHh---hc-----CC-----C
Confidence 4322 233457999999999999999999999999999999999999999876543322111 11 00 0
Q ss_pred cccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHH
Q 002238 831 PTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLS 872 (948)
Q Consensus 831 ~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~ 872 (948)
+.+. ......+.+++.+|++.+|.+||++.++++...
T Consensus 237 ~~~~-----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~ 273 (303)
T 3a7i_A 237 PTLE-----GNYSKPLKEFVEACLNKEPSFRPTAKELLKHKF 273 (303)
T ss_dssp CCCC-----SSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHH
T ss_pred CCCc-----cccCHHHHHHHHHHcCCChhhCcCHHHHhhChh
Confidence 1111 112245889999999999999999999988644
No 187
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=3.1e-38 Score=349.01 Aligned_cols=264 Identities=25% Similarity=0.378 Sum_probs=207.7
Q ss_pred hcCCcccceecccCceEEEEEEE------cCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCc
Q 002238 592 TNNFSEENILGRGGFGTVYKGEL------HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNE 665 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 665 (948)
.++|++.+.||+|+||.||+|++ .+++.||||++... .......++.+|+.++++++||||+++++++.+...
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 107 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV-CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 107 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccc-cchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence 46899999999999999999984 25778999998643 244556789999999999999999999999999999
Q ss_pred eEEEEEecCCCChhHHHHhhhhc--CCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcC---CCCeEE
Q 002238 666 KLLVFEYMPQGTLSRHIFNWAEE--GLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD---DMRAKV 740 (948)
Q Consensus 666 ~~lv~e~~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~---~~~~kl 740 (948)
.++||||+++|+|.+++...... ....+++..++.++.|++.||+|||+ .+|+||||||+||+++. +..+||
T Consensus 108 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~i~H~dlkp~NIli~~~~~~~~~kl 184 (327)
T 2yfx_A 108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKI 184 (327)
T ss_dssp CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeecCcCCHhHEEEecCCCcceEEE
Confidence 99999999999999999653211 12458999999999999999999997 89999999999999984 446999
Q ss_pred eecCCceecCCCC-CceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHh
Q 002238 741 ADFGLVRLAPEGK-GSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDESQPEESMHLVTWFRRI 818 (948)
Q Consensus 741 ~DfGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 818 (948)
+|||+++...... ........||+.|+|||++.+..++.++||||||+++|||++ |+.||......+.... +..
T Consensus 185 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~---~~~- 260 (327)
T 2yfx_A 185 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF---VTS- 260 (327)
T ss_dssp CCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH---HHT-
T ss_pred CccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHH---Hhc-
Confidence 9999987443222 122234568999999999999999999999999999999998 9999987654332111 111
Q ss_pred hcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhh
Q 002238 819 HLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVEL 877 (948)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~ 877 (948)
... ... .......+.+++.+|++.||.+||++.++++.|+.+...
T Consensus 261 ---~~~------~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~ 305 (327)
T 2yfx_A 261 ---GGR------MDP-----PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305 (327)
T ss_dssp ---TCC------CCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ---CCC------CCC-----CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence 000 000 011234588999999999999999999999999988653
No 188
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=7e-38 Score=340.62 Aligned_cols=251 Identities=25% Similarity=0.371 Sum_probs=208.1
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 669 (948)
.++|++.+.||+|+||.||+|... +++.||+|++..... .....+.+.+|+.+++.++||||+++++++.+++..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 467899999999999999999876 588999999876533 344567889999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceec
Q 002238 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (948)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~ 749 (948)
|||+++++|.+++.. ...+++.+++.++.|+++||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 94 ~e~~~~~~L~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 165 (294)
T 2rku_A 94 LELCRRRSLLELHKR-----RKALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 165 (294)
T ss_dssp EECCTTCBHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EecCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEcCCCCEEEEeccCceec
Confidence 999999999988743 1468999999999999999999997 89999999999999999999999999999866
Q ss_pred CCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCcccccccc
Q 002238 750 PEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHKAI 829 (948)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 829 (948)
..... ......||+.|+|||++.+..++.++||||||+++|||++|+.||......+... ..........
T Consensus 166 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~------~~~~~~~~~~--- 235 (294)
T 2rku_A 166 EYDGE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL------RIKKNEYSIP--- 235 (294)
T ss_dssp CSTTC-CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH------HHHTTCCCCC---
T ss_pred ccCcc-ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH------HHhhccCCCc---
Confidence 43322 2344579999999999999899999999999999999999999998765433211 1111111110
Q ss_pred CcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 830 DPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 830 ~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
. .....+.+++.+|++.||++||++.++++.
T Consensus 236 -~---------~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 236 -K---------HINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp -T---------TSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred -c---------ccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 1 122358899999999999999999999874
No 189
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=3e-38 Score=360.45 Aligned_cols=255 Identities=26% Similarity=0.371 Sum_probs=193.5
Q ss_pred HhhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCC------hhhHHHHHHHHHHHHhcCCCceeeEEeEEEe
Q 002238 590 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS------GKGLTEFKSEIAVLTKVRHRHLVALLGHCLD 662 (948)
Q Consensus 590 ~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~------~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 662 (948)
...++|.+.+.||+|+||.||+|..+ +++.||||++...... ......+.+|++++++++||||+++++++.
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~- 210 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD- 210 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence 45789999999999999999999875 6899999999764321 112235889999999999999999999975
Q ss_pred CCceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCC---CeE
Q 002238 663 GNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM---RAK 739 (948)
Q Consensus 663 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~---~~k 739 (948)
.+..++||||+++|+|.+++. ....+++.++..++.|++.||+|||+ .+|+||||||+|||++.++ .+|
T Consensus 211 ~~~~~lv~e~~~~g~L~~~l~-----~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~~~~k 282 (419)
T 3i6u_A 211 AEDYYIVLELMEGGELFDKVV-----GNKRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIK 282 (419)
T ss_dssp SSEEEEEEECCTTCBGGGGTS-----SSCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSSSCCEE
T ss_pred cCceEEEEEcCCCCcHHHHHh-----ccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCCCcceEE
Confidence 456899999999999988873 23578999999999999999999997 7999999999999997544 599
Q ss_pred EeecCCceecCCCCCceeeeecccccccCceeccc---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHH
Q 002238 740 VADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVT---GRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFR 816 (948)
Q Consensus 740 l~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~ 816 (948)
|+|||+++..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ....+.
T Consensus 283 l~DFG~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~--~~~~i~ 358 (419)
T 3i6u_A 283 ITDFGHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS--LKDQIT 358 (419)
T ss_dssp ECCSSTTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCC--HHHHHH
T ss_pred EeecccceecCCC--ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHH--HHHHHh
Confidence 9999999865432 23345679999999999863 6788999999999999999999999976543221 111111
Q ss_pred HhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 817 RIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
. ....+. ..........+.+++.+|++.||++||+++|+++
T Consensus 359 ~---~~~~~~---------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 359 S---GKYNFI---------PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp T---TCCCCC---------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred c---CCCCCC---------chhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 1 000000 0111122356889999999999999999999987
No 190
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=8.1e-38 Score=358.62 Aligned_cols=201 Identities=27% Similarity=0.397 Sum_probs=169.6
Q ss_pred hhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC-----C
Q 002238 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG-----N 664 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~ 664 (948)
+.++|++.+.||+|+||.||+|... +++.||||++..........+.+.+|+++++.++||||+++++++... .
T Consensus 24 i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 103 (432)
T 3n9x_A 24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD 103 (432)
T ss_dssp CCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred ecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence 4578999999999999999999875 688999999986554556678899999999999999999999999766 5
Q ss_pred ceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecC
Q 002238 665 EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 744 (948)
Q Consensus 665 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfG 744 (948)
..|+||||++ |+|.+++.. ...+++..+..++.||++||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 104 ~~~lv~e~~~-~~L~~~~~~-----~~~l~~~~~~~i~~qil~aL~~LH~---~givHrDlkp~NILl~~~~~~kL~DFG 174 (432)
T 3n9x_A 104 ELYIVLEIAD-SDLKKLFKT-----PIFLTEEHIKTILYNLLLGENFIHE---SGIIHRDLKPANCLLNQDCSVKVCDFG 174 (432)
T ss_dssp CEEEEEECCS-EEHHHHHHS-----SCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred eEEEEEecCC-cCHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHeEECCCCCEEEccCC
Confidence 6899999986 699988842 3569999999999999999999998 899999999999999999999999999
Q ss_pred CceecCCCCC---------------------ceeeeecccccccCceec-ccCCCCchhhHHHHHHHHHHHHhCCCCC
Q 002238 745 LVRLAPEGKG---------------------SIETRIAGTFGYLAPEYA-VTGRVTTKVDVFSFGVILMELITGRKAL 800 (948)
Q Consensus 745 la~~~~~~~~---------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~s~Gv~l~elltg~~p~ 800 (948)
+++....... ...+..+||+.|+|||++ ....++.++||||+||++|||++|..||
T Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~ 252 (432)
T 3n9x_A 175 LARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH 252 (432)
T ss_dssp TCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred CcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence 9996544321 123556799999999986 5567999999999999999999855444
No 191
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=2.6e-39 Score=364.78 Aligned_cols=246 Identities=15% Similarity=0.158 Sum_probs=192.5
Q ss_pred hcCCcccceecccCceEEEEEEE-cCCcEEEEEEeecCcC-ChhhHHHHHHHHH---HHHhcCCCceeeEE-------eE
Q 002238 592 TNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVI-SGKGLTEFKSEIA---VLTKVRHRHLVALL-------GH 659 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~~-~~~~~~~~~~E~~---~l~~l~H~niv~l~-------~~ 659 (948)
.++|++.+.||+|+||.||+|+. .+|+.||||++..... .....+.+.+|++ ++++++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46788999999999999999986 4799999999975422 3445678999994 55555899999998 66
Q ss_pred EEeCC-----------------ceEEEEEecCCCChhHHHHhhhhc--CCCCCCHHHHHHHHHHHHHHHHHHHhccCCCe
Q 002238 660 CLDGN-----------------EKLLVFEYMPQGTLSRHIFNWAEE--GLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 720 (948)
Q Consensus 660 ~~~~~-----------------~~~lv~e~~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i 720 (948)
+.+.+ ..++||||+ +|+|.+++...... ....+++..++.|+.||+.||+|||+ .+|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHH---TTE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHh---CCe
Confidence 55543 278999999 68999999653221 11345678899999999999999998 799
Q ss_pred eecCCCCccEEEcCCCCeEEeecCCceecCCCCCceeeeecccccccCceecccC-----------CCCchhhHHHHHHH
Q 002238 721 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTG-----------RVTTKVDVFSFGVI 789 (948)
Q Consensus 721 vHrDik~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~Dv~s~Gv~ 789 (948)
+||||||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||+
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i 302 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV 302 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence 9999999999999999999999999986432 3445667 999999999887 89999999999999
Q ss_pred HHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 790 LMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 790 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
+|||++|+.||......... ...... ....+.++.+++.+|++.||++||++.++++
T Consensus 303 l~elltg~~Pf~~~~~~~~~----------------~~~~~~-------~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 303 IYWIWCADLPITKDAALGGS----------------EWIFRS-------CKNIPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHHHSSCCC------CCS----------------GGGGSS-------CCCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHHHCCCCCcccccccch----------------hhhhhh-------ccCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 99999999999765432211 011110 0112245889999999999999999999986
No 192
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=4.8e-38 Score=341.18 Aligned_cols=255 Identities=23% Similarity=0.315 Sum_probs=190.3
Q ss_pred hcCCcccceecccCceEEEEEEE-cCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 670 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 670 (948)
.++|++.+.||+|+||.||+|.. .+|+.||||++..........+.+.++...++.++||||+++++++.+++..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 46899999999999999999987 47899999999765433334445555666688889999999999999999999999
Q ss_pred EecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCC-CeeecCCCCccEEEcCCCCeEEeecCCceec
Q 002238 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ-SFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (948)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~ivHrDik~~Nill~~~~~~kl~DfGla~~~ 749 (948)
||++ |+|.+++..... ....+++..++.++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||+++..
T Consensus 86 e~~~-~~l~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVID-KGQTIPEDILGKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 160 (290)
T ss_dssp ECCS-EEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHH---HSCCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred ehhc-cchHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 9997 588888765333 34679999999999999999999997 5 9999999999999999999999999999865
Q ss_pred CCCCCceeeeecccccccCceec----ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCcccc
Q 002238 750 PEGKGSIETRIAGTFGYLAPEYA----VTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSF 825 (948)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 825 (948)
.... ......||+.|+|||++ .+..++.++||||||+++|||++|+.||........ ...... ....
T Consensus 161 ~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~---~~~~--- 231 (290)
T 3fme_A 161 VDDV--AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQ-QLKQVV---EEPS--- 231 (290)
T ss_dssp -----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHH-HHHHHH---HSCC---
T ss_pred cccc--cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHH-HHHHHh---ccCC---
Confidence 4432 22334699999999996 566789999999999999999999999986433211 111111 1000
Q ss_pred ccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 826 HKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
+... ......++.+++.+|++.||++||++.|+++
T Consensus 232 -----~~~~----~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 232 -----PQLP----ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp -----CCCC----TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -----CCcc----cccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 0010 0112345889999999999999999999987
No 193
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=2.1e-38 Score=342.84 Aligned_cols=250 Identities=27% Similarity=0.444 Sum_probs=205.1
Q ss_pred hhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEe-------
Q 002238 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLD------- 662 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~------- 662 (948)
..++|++.+.||+|+||.||+|... +|+.||||++.... ..+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPET 82 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccc
Confidence 4567999999999999999999886 79999999987542 356789999999999999999998864
Q ss_pred ---------CCceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEc
Q 002238 663 ---------GNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLG 733 (948)
Q Consensus 663 ---------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~ 733 (948)
....++||||+++|+|.+++... ....+++..++.++.|++.||+|||+ .+|+||||||+||+++
T Consensus 83 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~ 156 (284)
T 2a19_B 83 SSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR---RGEKLDKVLALELFEQITKGVDYIHS---KKLINRDLKPSNIFLV 156 (284)
T ss_dssp ------CCEEEEEEEEECCCCSCBHHHHHHHG---GGSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEE
T ss_pred ccccccccCcceEEEEEeccCCCCHHHHHhhc---cCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHEEEc
Confidence 34579999999999999998642 22578999999999999999999997 7999999999999999
Q ss_pred CCCCeEEeecCCceecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHH
Q 002238 734 DDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVT 813 (948)
Q Consensus 734 ~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~ 813 (948)
.++.+||+|||+++...... ......||+.|+|||++.+..++.++||||||+++|||++|..|+... ....
T Consensus 157 ~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~-----~~~~- 228 (284)
T 2a19_B 157 DTKQVKIGDFGLVTSLKNDG--KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET-----SKFF- 228 (284)
T ss_dssp ETTEEEECCCTTCEESSCCS--CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH-----HHHH-
T ss_pred CCCCEEECcchhheeccccc--cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH-----HHHH-
Confidence 99999999999998765433 233456999999999999999999999999999999999999887421 1111
Q ss_pred HHHHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhh
Q 002238 814 WFRRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVEL 877 (948)
Q Consensus 814 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~ 877 (948)
.... .. .+... ....+.+++.+|++.||.+||++.|+++.|+.+.+.
T Consensus 229 --~~~~--~~----~~~~~---------~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~ 275 (284)
T 2a19_B 229 --TDLR--DG----IISDI---------FDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKS 275 (284)
T ss_dssp --HHHH--TT----CCCTT---------SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred --HHhh--cc----ccccc---------CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhC
Confidence 1111 01 11111 123578999999999999999999999999988653
No 194
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=7.3e-38 Score=342.22 Aligned_cols=252 Identities=25% Similarity=0.392 Sum_probs=204.0
Q ss_pred hhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEE
Q 002238 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 669 (948)
+.++|++.+.||+|+||.||+|+.. +|+.||||++... .......+.+|++++++++||||+++++++.+.+..++|
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKS--PAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLV 84 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC--------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecc--cccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEE
Confidence 4578999999999999999999875 7899999999764 223346789999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEE---cCCCCeEEeecCCc
Q 002238 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGLV 746 (948)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill---~~~~~~kl~DfGla 746 (948)
|||+++++|.+++... ..+++..++.++.|++.||+|||+ .+|+||||||+||++ +.++.++|+|||++
T Consensus 85 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~ 156 (304)
T 2jam_A 85 MQLVSGGELFDRILER-----GVYTEKDASLVIQQVLSAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDFGLS 156 (304)
T ss_dssp ECCCCSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCSCCGGGCEESSSSTTCCEEBCSCSTT
T ss_pred EEcCCCccHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEecCCCCCCEEEccCCcc
Confidence 9999999999988531 468999999999999999999997 899999999999999 78889999999998
Q ss_pred eecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCccccc
Q 002238 747 RLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFH 826 (948)
Q Consensus 747 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 826 (948)
+..... ......||+.|+|||++.+..++.++||||||+++|||++|+.||......+.... +......+.
T Consensus 157 ~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~------i~~~~~~~~ 227 (304)
T 2jam_A 157 KMEQNG---IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEK------IKEGYYEFE 227 (304)
T ss_dssp CCCCCB---TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH------HHHCCCCCC
T ss_pred eecCCC---ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHH------HHcCCCCCC
Confidence 754332 22345699999999999999999999999999999999999999987654332111 111111111
Q ss_pred cccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 827 KAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
.. ........+.+++.+|++.||++||++.++++.
T Consensus 228 ~~---------~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 228 SP---------FWDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp TT---------TTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cc---------ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 00 011223468899999999999999999999874
No 195
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=5.1e-38 Score=367.98 Aligned_cols=254 Identities=25% Similarity=0.345 Sum_probs=204.2
Q ss_pred hhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCCh-----------hhHHHHHHHHHHHHhcCCCceeeEEe
Q 002238 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISG-----------KGLTEFKSEIAVLTKVRHRHLVALLG 658 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~-----------~~~~~~~~E~~~l~~l~H~niv~l~~ 658 (948)
+.++|++.+.||+|+||.||+|+.+ +++.||||++....... ...+.+.+|+.++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 4678999999999999999999875 68899999997643221 33577899999999999999999999
Q ss_pred EEEeCCceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCC--
Q 002238 659 HCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM-- 736 (948)
Q Consensus 659 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~-- 736 (948)
++.++...++||||+++|+|.+++.. ...+++..++.++.||+.||+|||+ .+|+||||||+|||++.++
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~ 185 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIIN-----RHKFDECDAANIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSL 185 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESSTTCC
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCcHHHEEEecCCCC
Confidence 99999999999999999999988854 1468999999999999999999997 8999999999999998776
Q ss_pred -CeEEeecCCceecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHH
Q 002238 737 -RAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWF 815 (948)
Q Consensus 737 -~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~ 815 (948)
.+||+|||+++...... ......||+.|+|||++. +.++.++||||+||++|||++|+.||......+....+.
T Consensus 186 ~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~-- 260 (504)
T 3q5i_A 186 LNIKIVDFGLSSFFSKDY--KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVE-- 260 (504)
T ss_dssp SSEEECCCTTCEECCTTS--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH--
T ss_pred ccEEEEECCCCEEcCCCC--ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH--
Confidence 69999999998765432 234457999999999986 569999999999999999999999998766543322211
Q ss_pred HHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 816 RRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
.....+. ...+.....++.+++.+|++.||.+|||+.|+++.
T Consensus 261 ----~~~~~~~---------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 261 ----KGKYYFD---------FNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp ----HCCCCCC---------HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ----cCCCCCC---------ccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 1111000 01111223568899999999999999999999874
No 196
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=7.1e-38 Score=347.08 Aligned_cols=251 Identities=24% Similarity=0.360 Sum_probs=208.2
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 669 (948)
.++|.+.+.||+|+||.||+|... +++.||+|++..... .....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 467999999999999999999875 578999999876532 344567899999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceec
Q 002238 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (948)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~ 749 (948)
|||+++++|.+++.. ...+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 120 ~e~~~~~~L~~~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 191 (335)
T 2owb_A 120 LELCRRRSLLELHKR-----RKALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 191 (335)
T ss_dssp ECCCTTCBHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EecCCCCCHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCCEecCCCchhEEEcCCCCEEEeeccCceec
Confidence 999999999988743 1468999999999999999999997 89999999999999999999999999999866
Q ss_pred CCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCcccccccc
Q 002238 750 PEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHKAI 829 (948)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 829 (948)
..... ......||+.|+|||++.+..++.++||||||+++|||++|+.||......+....+ ......+.
T Consensus 192 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~------~~~~~~~~--- 261 (335)
T 2owb_A 192 EYDGE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI------KKNEYSIP--- 261 (335)
T ss_dssp CSTTC-CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH------HHTCCCCC---
T ss_pred ccCcc-cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHH------hcCCCCCC---
Confidence 43322 234457999999999999999999999999999999999999999876543321111 11111110
Q ss_pred CcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 830 DPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 830 ~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
. .....+.+++.+|++.||++||++.++++.
T Consensus 262 -~---------~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 262 -K---------HINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp -T---------TSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred -c---------cCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1 112357899999999999999999999874
No 197
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.6e-38 Score=350.24 Aligned_cols=270 Identities=26% Similarity=0.344 Sum_probs=199.7
Q ss_pred HhhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCCh---hhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCc
Q 002238 590 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISG---KGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNE 665 (948)
Q Consensus 590 ~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 665 (948)
...++|++.+.||+|+||.||+|... +|+.||||++....... ...+.+.+|+++++.++||||+++++++.+.+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 34578999999999999999999875 68999999987542221 113468899999999999999999999999999
Q ss_pred eEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCC
Q 002238 666 KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGL 745 (948)
Q Consensus 666 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGl 745 (948)
.++||||+++ +|.+++.. ....+++..+..++.|+++||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 87 ~~lv~e~~~~-~l~~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 158 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKD----NSLVLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGL 158 (346)
T ss_dssp CEEEEECCSE-EHHHHHTT----CCSSCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCGG
T ss_pred eEEEEEcCCC-CHHHHHHh----cCcCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCCHHHEEEcCCCCEEEEeccc
Confidence 9999999975 88877732 33568889999999999999999997 8999999999999999999999999999
Q ss_pred ceecCCCCCceeeeecccccccCceecccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCc-c
Q 002238 746 VRLAPEGKGSIETRIAGTFGYLAPEYAVTG-RVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSK-D 823 (948)
Q Consensus 746 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~ 823 (948)
++...... .......||+.|+|||++.+. .++.++|||||||++|||++|.+||......+....+ ........ .
T Consensus 159 a~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i--~~~~~~~~~~ 235 (346)
T 1ua2_A 159 AKSFGSPN-RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRI--FETLGTPTEE 235 (346)
T ss_dssp GSTTTSCC-CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH--HHHHCCCCTT
T ss_pred ceeccCCc-ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHH--HHHcCCCChh
Confidence 98654332 223445789999999998764 5899999999999999999999999876544332211 11111100 0
Q ss_pred cccccc---C-------cccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 824 SFHKAI---D-------PTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 824 ~~~~~~---~-------~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
.+.... + +..............+.+++.+|++.||++|||+.|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 236 QWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp TSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred hhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 000000 0 0000000112233568999999999999999999999874
No 198
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.2e-37 Score=345.85 Aligned_cols=259 Identities=22% Similarity=0.302 Sum_probs=190.1
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcC-CCceeeEEeEEEe-------
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR-HRHLVALLGHCLD------- 662 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~------- 662 (948)
..+|++.+.||+|+||.||+|+.. +++.||||++... .....+.+.+|+.+++++. ||||+++++++..
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 104 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN--EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDT 104 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES--SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTT
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC--chHHHHHHHHHHHHHHHhccCCChhhcccccccccccccc
Confidence 357899999999999999999874 7899999998654 4455678999999999996 9999999999953
Q ss_pred -CCceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCC--eeecCCCCccEEEcCCCCeE
Q 002238 663 -GNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQS--FIHRDLKPSNILLGDDMRAK 739 (948)
Q Consensus 663 -~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivHrDik~~Nill~~~~~~k 739 (948)
....++||||+. |+|.+++.... ....+++.+++.++.||+.||+|||+ .+ |+||||||+|||++.++.+|
T Consensus 105 ~~~~~~lv~e~~~-g~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~---~~~~ivH~Dikp~NIl~~~~~~~k 178 (337)
T 3ll6_A 105 GQAEFLLLTELCK-GQLVEFLKKME--SRGPLSCDTVLKIFYQTCRAVQHMHR---QKPPIIHRDLKVENLLLSNQGTIK 178 (337)
T ss_dssp SSEEEEEEEECCS-EEHHHHHHHHH--TTCSCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCCCCCGGGCEECTTSCEE
T ss_pred CCceEEEEEEecC-CCHHHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCEEEccCCcccEEECCCCCEE
Confidence 334789999995 79998886532 23579999999999999999999997 67 99999999999999999999
Q ss_pred EeecCCceecCCCCCc-----------eeeeecccccccCceec---ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc
Q 002238 740 VADFGLVRLAPEGKGS-----------IETRIAGTFGYLAPEYA---VTGRVTTKVDVFSFGVILMELITGRKALDESQP 805 (948)
Q Consensus 740 l~DfGla~~~~~~~~~-----------~~~~~~gt~~y~aPE~~---~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~ 805 (948)
|+|||+++........ ......||+.|+|||++ .+..++.++||||||+++|||++|+.||.....
T Consensus 179 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~ 258 (337)
T 3ll6_A 179 LCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK 258 (337)
T ss_dssp BCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----
T ss_pred EecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhH
Confidence 9999999865443221 11234689999999998 566789999999999999999999999975432
Q ss_pred hhhhhHHHHHHHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhhhC
Q 002238 806 EESMHLVTWFRRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELWK 879 (948)
Q Consensus 806 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~~~ 879 (948)
... . .......... .....+.+++.+|++.||.+||++.|+++.|+.+.....
T Consensus 259 ~~~------~------~~~~~~~~~~---------~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~ 311 (337)
T 3ll6_A 259 LRI------V------NGKYSIPPHD---------TQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARN 311 (337)
T ss_dssp -------------------CCCCTTC---------CSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred HHh------h------cCcccCCccc---------ccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccC
Confidence 211 0 0000000000 011237789999999999999999999999999876543
No 199
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=2.7e-38 Score=368.86 Aligned_cols=254 Identities=26% Similarity=0.356 Sum_probs=208.7
Q ss_pred hhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEE
Q 002238 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS-GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLL 668 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 668 (948)
..++|++.+.||+|+||.||+|+.+ +|+.||||++...... ......+.+|++++++++||||+++++++.+.+..++
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 3567999999999999999999875 7899999999765432 3456789999999999999999999999999999999
Q ss_pred EEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEE---cCCCCeEEeecCC
Q 002238 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGL 745 (948)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill---~~~~~~kl~DfGl 745 (948)
||||+.+|+|.+++.. ...+++..++.++.||+.||+|||+ .+|+||||||+|||+ +.++.+||+|||+
T Consensus 104 v~e~~~~~~L~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~ 175 (484)
T 3nyv_A 104 VGEVYTGGELFDEIIS-----RKRFSEVDAARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGL 175 (484)
T ss_dssp EECCCCSCBHHHHHHT-----CSCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEECCTTH
T ss_pred EEecCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEecCCCCCcEEEEeeee
Confidence 9999999999988843 3578999999999999999999997 899999999999999 5678999999999
Q ss_pred ceecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCcccc
Q 002238 746 VRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSF 825 (948)
Q Consensus 746 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 825 (948)
++...... ......||+.|+|||++.+ .++.++||||+||++|||++|++||......+....+ . .....+
T Consensus 176 a~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i---~---~~~~~~ 246 (484)
T 3nyv_A 176 STHFEASK--KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV---E---KGKYTF 246 (484)
T ss_dssp HHHBCCCC--SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH---H---HCCCCC
T ss_pred eEEccccc--ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHH---H---cCCCCC
Confidence 98665433 2334579999999999865 6999999999999999999999999876654332211 1 111100
Q ss_pred ccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 826 HKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
. ...+......+.+++.+|++.+|.+|||+.|++++
T Consensus 247 ------~---~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 247 ------E---LPQWKKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp ------C---SGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ------C---CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 0 01112233568899999999999999999999875
No 200
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=350.08 Aligned_cols=264 Identities=22% Similarity=0.359 Sum_probs=203.4
Q ss_pred hhcCCcccceecccCceEEEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEEE
Q 002238 591 VTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 670 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 670 (948)
..++|++.+.||+|+||.||+|+.++ .||||++..........+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~ 108 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIIT 108 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEEC
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEe
Confidence 35789999999999999999998753 5999998765444445567889999999999999999999999999999999
Q ss_pred EecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceecC
Q 002238 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 750 (948)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~~ 750 (948)
||+++++|.+++.. ....+++.+++.++.|++.||+|||+ .+|+||||||+||+++ ++.+||+|||+++...
T Consensus 109 e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~ 180 (319)
T 2y4i_B 109 SLCKGRTLYSVVRD----AKIVLDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKNVFYD-NGKVVITDFGLFSISG 180 (319)
T ss_dssp BCCCSEEHHHHTTS----SCCCCCSHHHHHHHHHHHHHHHHHHH---TTCCCCCCCSTTEEEC---CCEECCCSCCC---
T ss_pred ecccCCcHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChhhEEEe-CCCEEEeecCCccccc
Confidence 99999999998843 33578999999999999999999997 8999999999999998 6799999999987543
Q ss_pred CCC----CceeeeecccccccCceeccc---------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHH
Q 002238 751 EGK----GSIETRIAGTFGYLAPEYAVT---------GRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRR 817 (948)
Q Consensus 751 ~~~----~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 817 (948)
... ........||+.|+|||++.+ ..++.++||||||+++|||++|+.||...........
T Consensus 181 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~------ 254 (319)
T 2y4i_B 181 VLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQ------ 254 (319)
T ss_dssp -------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHH------
T ss_pred cccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH------
Confidence 211 112233568999999999864 4578999999999999999999999987654332111
Q ss_pred hhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhhhCCC
Q 002238 818 IHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELWKPT 881 (948)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~~~~~ 881 (948)
... ......... ....++.+++.+|++.+|++||++.++++.|+.+.+.....
T Consensus 255 ~~~--~~~~~~~~~---------~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~~ 307 (319)
T 2y4i_B 255 MGT--GMKPNLSQI---------GMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRRL 307 (319)
T ss_dssp HHT--TCCCCCCCS---------SCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-------
T ss_pred hcc--CCCCCCCcC---------CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhccC
Confidence 111 000011010 11234889999999999999999999999999987655443
No 201
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=3.3e-38 Score=353.30 Aligned_cols=264 Identities=24% Similarity=0.395 Sum_probs=190.0
Q ss_pred hhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC------
Q 002238 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG------ 663 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------ 663 (948)
+.++|++.+.||+|+||.||+|... +|+.||||++..........+.+.+|+++++.++||||+++++++...
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 106 (367)
T 2fst_X 27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106 (367)
T ss_dssp EETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence 3578999999999999999999864 789999999976544555667899999999999999999999998754
Q ss_pred CceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeec
Q 002238 664 NEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADF 743 (948)
Q Consensus 664 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~Df 743 (948)
...++||||+ +++|.+++.. ..+++..+..++.||++||+|||+ .+|+||||||+|||++.++.+||+||
T Consensus 107 ~~~~lv~e~~-~~~L~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kL~DF 176 (367)
T 2fst_X 107 NDVYLVTHLM-GADLNNIVKC------QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 176 (367)
T ss_dssp CCCEEEEECC-CEECC-----------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECC-
T ss_pred CeEEEEeccc-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHhhEEECCCCCEEEeec
Confidence 5679999999 7899888732 468999999999999999999997 89999999999999999999999999
Q ss_pred CCceecCCCCCceeeeecccccccCceeccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCc
Q 002238 744 GLVRLAPEGKGSIETRIAGTFGYLAPEYAVT-GRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSK 822 (948)
Q Consensus 744 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 822 (948)
|+++..... .+...||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+....+. .......
T Consensus 177 G~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~--~~~g~p~ 250 (367)
T 2fst_X 177 GLARHTADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL--RLVGTPG 250 (367)
T ss_dssp ------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH--HHHCSCC
T ss_pred ccccccccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH--HHhCCCC
Confidence 999865432 344679999999999887 678999999999999999999999998766543322221 1100000
Q ss_pred ccccc------------ccC--cccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 823 DSFHK------------AID--PTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 823 ~~~~~------------~~~--~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
..... .+. +..............+.+++.+|++.||++|||+.+++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 251 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 00000 000 0000011111223568899999999999999999999874
No 202
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1.3e-37 Score=350.04 Aligned_cols=266 Identities=24% Similarity=0.303 Sum_probs=197.5
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC------
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGN------ 664 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------ 664 (948)
.++|++.+.||+|+||.||+|... +++.||||++..........+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 468999999999999999999865 6899999999875545566678999999999999999999999997654
Q ss_pred ceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecC
Q 002238 665 EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 744 (948)
Q Consensus 665 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfG 744 (948)
..++||||++ |+|.+.+. ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 104 ~~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 172 (371)
T 2xrw_A 104 DVYIVMELMD-ANLCQVIQ-------MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFG 172 (371)
T ss_dssp EEEEEEECCS-EEHHHHHH-------SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCCC
T ss_pred ceEEEEEcCC-CCHHHHHh-------hccCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEEEee
Confidence 6799999996 47877763 358899999999999999999997 899999999999999999999999999
Q ss_pred CceecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHH----------
Q 002238 745 LVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTW---------- 814 (948)
Q Consensus 745 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~---------- 814 (948)
+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+....+....+..
T Consensus 173 ~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 250 (371)
T 2xrw_A 173 LARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFM 250 (371)
T ss_dssp C------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHH
T ss_pred ccccccccc--ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 998654322 23446799999999999999999999999999999999999999987654332111100
Q ss_pred ------HHHhhcCc-----cccccccCccc-C-CccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 815 ------FRRIHLSK-----DSFHKAIDPTI-D-LNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 815 ------~~~~~~~~-----~~~~~~~~~~~-~-~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
........ ..+.+.+.... + ...........+.+++.+|++.||++|||++|+++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 251 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp TTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 00000000 00000000000 0 001112235678999999999999999999999884
No 203
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=3.8e-38 Score=353.29 Aligned_cols=264 Identities=21% Similarity=0.326 Sum_probs=205.8
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 670 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 670 (948)
.++|++.+.||+|+||.||+|... +++.||+|++.... .....+.+.+|+.++++++||||+++++++.+++..++||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 110 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 110 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC-CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc-CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEE
Confidence 467999999999999999999876 78999999997642 4455678999999999999999999999999999999999
Q ss_pred EecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceecC
Q 002238 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 750 (948)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~~ 750 (948)
||+++++|.+++... ..+++..+..++.|++.||+|||+ +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 111 e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 183 (360)
T 3eqc_A 111 EHMDGGSLDQVLKKA-----GRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 183 (360)
T ss_dssp CCCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH--HHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHH
T ss_pred ECCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH--hCCEEcCCccHHHEEECCCCCEEEEECCCCcccc
Confidence 999999999998541 468899999999999999999997 2489999999999999999999999999987442
Q ss_pred CCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhc----------
Q 002238 751 EGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHL---------- 820 (948)
Q Consensus 751 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~---------- 820 (948)
.. ......||+.|+|||++.+..++.++||||||+++|||++|+.||......+.............
T Consensus 184 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (360)
T 3eqc_A 184 DS---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTP 260 (360)
T ss_dssp HH---C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-----------------
T ss_pred cc---cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccC
Confidence 21 22345799999999999999999999999999999999999999987654332111100000000
Q ss_pred ------------Cccc-------cccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 821 ------------SKDS-------FHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 821 ------------~~~~-------~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
.... ......+... ......++.+++.+|++.||++|||++|++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 261 GRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLP----SGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp -------------CCCHHHHHHHHHHSCCCCCC----TTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred CCcccccccCCCCcccchhhhhHHhccCCCCCC----cccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 0000 0000000000 01123468899999999999999999999874
No 204
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=6.2e-38 Score=340.48 Aligned_cols=260 Identities=27% Similarity=0.435 Sum_probs=199.3
Q ss_pred hcCCcccceecccCceEEEEEEEc--CCc--EEEEEEeecCcC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCce
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH--DGT--KIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEK 666 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~--~g~--~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 666 (948)
.++|++.+.||+|+||.||+|++. +++ .||||+++.... .....+.+.+|++++++++||||+++++++.++. .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 457999999999999999999864 333 689999876432 2345678999999999999999999999998754 8
Q ss_pred EEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCc
Q 002238 667 LLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLV 746 (948)
Q Consensus 667 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla 746 (948)
++||||+++++|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 96 ~~v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~ 168 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKH----QGHFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLM 168 (291)
T ss_dssp EEEEECCTTCBHHHHHHHH----GGGSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTC
T ss_pred eeeEecccCCCHHHHHHhc----cCCcCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEEcCCCCEEEcccccc
Confidence 8999999999999998542 2468899999999999999999997 89999999999999999999999999999
Q ss_pred eecCCCCCc--eeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHhhcCcc
Q 002238 747 RLAPEGKGS--IETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDESQPEESMHLVTWFRRIHLSKD 823 (948)
Q Consensus 747 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 823 (948)
+........ ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||......+... .......
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~------~~~~~~~ 242 (291)
T 1u46_A 169 RALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH------KIDKEGE 242 (291)
T ss_dssp EECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH------HHHTSCC
T ss_pred ccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHH------HHHccCC
Confidence 876544322 1233457889999999999899999999999999999999 999998765433211 1111110
Q ss_pred ccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhh
Q 002238 824 SFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVE 876 (948)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~ 876 (948)
.. . .....+..+.+++.+|++.+|++||++.++++.|+++..
T Consensus 243 ~~--------~---~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 284 (291)
T 1u46_A 243 RL--------P---RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 284 (291)
T ss_dssp CC--------C---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred CC--------C---CCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence 00 0 011223468899999999999999999999999988753
No 205
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=9.1e-38 Score=337.92 Aligned_cols=249 Identities=25% Similarity=0.411 Sum_probs=205.5
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS-GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 669 (948)
.++|++.+.||+|+||.||+|+.. +++.||||++...... ......+.+|++++++++||||+++++++.+++..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 367999999999999999999875 6789999998654221 22346789999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceec
Q 002238 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (948)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~ 749 (948)
|||+++|+|.+++... ..+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.++|+|||++...
T Consensus 93 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~ 164 (284)
T 2vgo_A 93 LEFAPRGELYKELQKH-----GRFDEQRSATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHA 164 (284)
T ss_dssp ECCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEEcCCCCEEEecccccccC
Confidence 9999999999988541 468999999999999999999997 89999999999999999999999999998765
Q ss_pred CCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCcccccccc
Q 002238 750 PEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHKAI 829 (948)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 829 (948)
.... .....||+.|+|||++.+..++.++||||||+++|||++|+.||......+... .+...... +
T Consensus 165 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~------~~~~~~~~----~ 231 (284)
T 2vgo_A 165 PSLR---RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHR------RIVNVDLK----F 231 (284)
T ss_dssp SSSC---BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH------HHHTTCCC----C
T ss_pred cccc---cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHH------HHhccccC----C
Confidence 4422 234569999999999999999999999999999999999999998755433211 11111100 1
Q ss_pred CcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 830 DPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 830 ~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
.+ .....+.+++.+|++.||.+||++.++++.
T Consensus 232 ~~---------~~~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 232 PP---------FLSDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp CT---------TSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred CC---------cCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 11 122458899999999999999999999874
No 206
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1.3e-37 Score=339.36 Aligned_cols=267 Identities=24% Similarity=0.374 Sum_probs=202.9
Q ss_pred cCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEEEE
Q 002238 593 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFE 671 (948)
Q Consensus 593 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 671 (948)
++|++.+.||+|+||.||+|+.+ +|+.||||++..........+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57899999999999999999875 78999999987654344445788999999999999999999999999999999999
Q ss_pred ecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceecCC
Q 002238 672 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE 751 (948)
Q Consensus 672 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~~~ 751 (948)
|++ ++|.+++.. .....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 83 ~~~-~~L~~~~~~---~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 155 (299)
T 2r3i_A 83 FLH-QDLKKFMDA---SALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 155 (299)
T ss_dssp CCS-EEHHHHHHH---TTTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCC
T ss_pred ccc-CCHHHHHHh---hhccCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHeEEcCCCCEEECcchhhhhccC
Confidence 997 699988854 223568899999999999999999997 7999999999999999999999999999886543
Q ss_pred CCCceeeeecccccccCceecccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCcccc-c---
Q 002238 752 GKGSIETRIAGTFGYLAPEYAVTGR-VTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSF-H--- 826 (948)
Q Consensus 752 ~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~--- 826 (948)
... ......||+.|+|||++.+.. ++.++||||||+++|||++|+.||......+... ............. .
T Consensus 156 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 232 (299)
T 2r3i_A 156 PVR-TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF--RIFRTLGTPDEVVWPGVT 232 (299)
T ss_dssp CSB-CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH--HHHHHHCCCCTTTSTTGG
T ss_pred Ccc-ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHH--HHHHHhCCCchhhhhHhh
Confidence 221 223346899999999998765 7999999999999999999999998765433221 1111111110000 0
Q ss_pred --cccCcccCC------ccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 827 --KAIDPTIDL------NEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 827 --~~~~~~~~~------~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
....+.+.. .........++.+++.+|++.||++||++.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp GSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000000000 0001123356889999999999999999999977
No 207
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=6.6e-38 Score=351.63 Aligned_cols=276 Identities=21% Similarity=0.278 Sum_probs=202.9
Q ss_pred eHHHHHHhhcCCcccceecccCceEEEEEEEcCCcEEEEEEeecCcCC---------hhhHHHHHHHHHHHHhcCCCcee
Q 002238 584 SIQVLRNVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVIS---------GKGLTEFKSEIAVLTKVRHRHLV 654 (948)
Q Consensus 584 ~~~~l~~~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~---------~~~~~~~~~E~~~l~~l~H~niv 654 (948)
...++..+.++|++.+.||+|+||.||+|...+|+.||||++...... ....+.+.+|++++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 467788899999999999999999999999888999999998654222 12237899999999999999999
Q ss_pred eEEeEEEeC-----CceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCcc
Q 002238 655 ALLGHCLDG-----NEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSN 729 (948)
Q Consensus 655 ~l~~~~~~~-----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~N 729 (948)
++++++... ...++||||++ |+|.+.+.. ....+++..+..++.|++.||+|||+ .+|+||||||+|
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~N 164 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHD----QRIVISPQHIQYFMYHILLGLHVLHE---AGVVHRDLHPGN 164 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHC----TTSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGG
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHH---CcCEecCCChHH
Confidence 999998543 35799999997 688887742 33578999999999999999999997 799999999999
Q ss_pred EEEcCCCCeEEeecCCceecCCCCCceeeeecccccccCceeccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhh
Q 002238 730 ILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVT-GRVTTKVDVFSFGVILMELITGRKALDESQPEES 808 (948)
Q Consensus 730 ill~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~ 808 (948)
|+++.++.+||+|||+++...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+.
T Consensus 165 Il~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~ 242 (362)
T 3pg1_A 165 ILLADNNDITICDFNLAREDTADA--NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQ 242 (362)
T ss_dssp EEECTTCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred EEEcCCCCEEEEecCccccccccc--ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHH
Confidence 999999999999999998543322 2344578999999999877 6789999999999999999999999987664433
Q ss_pred hhHHHHHHHh-------hcCccccccccCcc---c---CCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 809 MHLVTWFRRI-------HLSKDSFHKAIDPT---I---DLNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 809 ~~~~~~~~~~-------~~~~~~~~~~~~~~---~---~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
...+...... ..........+... . ............+.+++.+|++.||.+|||+.|+++
T Consensus 243 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 243 LNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp HHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 2211100000 00000000000000 0 000111122356889999999999999999999987
No 208
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=2e-37 Score=354.56 Aligned_cols=203 Identities=26% Similarity=0.355 Sum_probs=175.9
Q ss_pred hhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhc------CCCceeeEEeEEEeC
Q 002238 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV------RHRHLVALLGHCLDG 663 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l------~H~niv~l~~~~~~~ 663 (948)
+..+|++.+.||+|+||.||+|... +++.||||++.. .......+.+|+++++.+ +|+||+++++++...
T Consensus 95 ~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 171 (429)
T 3kvw_A 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRN---EKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFR 171 (429)
T ss_dssp ETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEET
T ss_pred ccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECC---ccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccC
Confidence 3568999999999999999999865 689999999875 334456788899988887 577999999999999
Q ss_pred CceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCC--eEEe
Q 002238 664 NEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR--AKVA 741 (948)
Q Consensus 664 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~--~kl~ 741 (948)
...++||||+. ++|.+++.. .....+++..+..++.||+.||+|||+ .+|+||||||+|||++.++. +||+
T Consensus 172 ~~~~lv~e~~~-~~L~~~l~~---~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NILl~~~~~~~vkL~ 244 (429)
T 3kvw_A 172 NHICMTFELLS-MNLYELIKK---NKFQGFSLPLVRKFAHSILQCLDALHK---NRIIHCDLKPENILLKQQGRSGIKVI 244 (429)
T ss_dssp TEEEEEECCCC-CBHHHHHHH---TTTCCCCHHHHHHHHHHHHHHHHHHHH---HTEECSCCSGGGEEESSTTSCCEEEC
T ss_pred CeEEEEEeccC-CCHHHHHHh---ccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEccCCCcceEEe
Confidence 99999999995 689888854 233468999999999999999999997 79999999999999999887 9999
Q ss_pred ecCCceecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchh
Q 002238 742 DFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEE 807 (948)
Q Consensus 742 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~ 807 (948)
|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|++||......+
T Consensus 245 DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~ 306 (429)
T 3kvw_A 245 DFGSSCYEHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGD 306 (429)
T ss_dssp CCTTCEETTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred ecccceecCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHH
Confidence 99999865432 234578999999999999999999999999999999999999998776543
No 209
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.3e-37 Score=340.00 Aligned_cols=253 Identities=26% Similarity=0.404 Sum_probs=202.1
Q ss_pred HhhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEE
Q 002238 590 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLL 668 (948)
Q Consensus 590 ~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 668 (948)
...++|++.+.||+|+||.||+|... +|+.||||++... ...+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 101 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE----SDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWI 101 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETT----SCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCch----HHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEE
Confidence 34678999999999999999999875 5899999998753 234678999999999999999999999999999999
Q ss_pred EEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCcee
Q 002238 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 748 (948)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~ 748 (948)
||||+++++|.+++.. ....+++.+++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++..
T Consensus 102 v~e~~~~~~L~~~~~~----~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 174 (314)
T 3com_A 102 VMEYCGAGSVSDIIRL----RNKTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVAGQ 174 (314)
T ss_dssp EEECCTTEEHHHHHHH----HTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EeecCCCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCcCHHHEEECCCCCEEEeecccchh
Confidence 9999999999998843 23578999999999999999999997 8999999999999999999999999999986
Q ss_pred cCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCccccccc
Q 002238 749 APEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHKA 828 (948)
Q Consensus 749 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 828 (948)
...... ......||+.|+|||++.+..++.++||||||+++|||++|+.||............ ...
T Consensus 175 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~---~~~---------- 240 (314)
T 3com_A 175 LTDTMA-KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMI---PTN---------- 240 (314)
T ss_dssp CBTTBS-CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH---HHS----------
T ss_pred hhhhcc-ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHH---hcC----------
Confidence 654322 233456999999999999999999999999999999999999999876543221111 000
Q ss_pred cCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 829 IDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 829 ~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
..+.... .......+.+++.+|++.||.+||++.++++.
T Consensus 241 ~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 241 PPPTFRK---PELWSDNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp CCCCCSS---GGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred CCcccCC---cccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 0111110 11123468899999999999999999999773
No 210
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=2.3e-37 Score=336.79 Aligned_cols=252 Identities=22% Similarity=0.377 Sum_probs=198.1
Q ss_pred CCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEEEEe
Q 002238 594 NFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVFEY 672 (948)
Q Consensus 594 ~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 672 (948)
.|....+||+|+||.||+|... +++.||||++... .....+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 100 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER--DSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQ 100 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECC--CC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCC--chHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEe
Confidence 4555668999999999999864 6889999998764 334457899999999999999999999999999999999999
Q ss_pred cCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcC-CCCeEEeecCCceecCC
Q 002238 673 MPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD-DMRAKVADFGLVRLAPE 751 (948)
Q Consensus 673 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~-~~~~kl~DfGla~~~~~ 751 (948)
+++++|.+++... .....+++..+..++.|++.||+|||+ .+|+||||||+||+++. ++.+||+|||+++....
T Consensus 101 ~~~~~L~~~l~~~--~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~ 175 (295)
T 2clq_A 101 VPGGSLSALLRSK--WGPLKDNEQTIGFYTKQILEGLKYLHD---NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG 175 (295)
T ss_dssp CSEEEHHHHHHHT--TCCCTTCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC
T ss_pred CCCCCHHHHHHhh--ccCCCccHHHHHHHHHHHHHHHHHHHh---CCEEccCCChhhEEEECCCCCEEEeecccccccCC
Confidence 9999999998542 223456789999999999999999997 89999999999999987 89999999999986644
Q ss_pred CCCceeeeecccccccCceecccCC--CCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCcccccccc
Q 002238 752 GKGSIETRIAGTFGYLAPEYAVTGR--VTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHKAI 829 (948)
Q Consensus 752 ~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 829 (948)
... ......||+.|+|||++.+.. ++.++||||||+++|||++|+.||......... ... ..... .
T Consensus 176 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~--~~~~~--------~ 243 (295)
T 2clq_A 176 INP-CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAA-MFK--VGMFK--------V 243 (295)
T ss_dssp ------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHH-HHH--HHHHC--------C
T ss_pred CCC-cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHH-HHh--hcccc--------c
Confidence 321 233456999999999987653 889999999999999999999999754332211 100 00000 0
Q ss_pred CcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 830 DPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 830 ~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
.+.+. .....++.+++.+|++.||++||++.++++
T Consensus 244 ~~~~~-----~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 244 HPEIP-----ESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp CCCCC-----TTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred ccccc-----ccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 11111 112345889999999999999999999976
No 211
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.3e-37 Score=349.61 Aligned_cols=265 Identities=20% Similarity=0.311 Sum_probs=199.8
Q ss_pred HhhcCCcccceecccCceEEEEEEE-cCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC-----
Q 002238 590 NVTNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG----- 663 (948)
Q Consensus 590 ~~~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~----- 663 (948)
...++|++.+.||+|+||.||+|.. .+|+.||||++.... ....+|+++++.++||||+++++++...
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~------~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 77 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP------RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEP 77 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT------TSCCHHHHHHTTCCCTTBCCEEEEEEEC-----
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc------chHHHHHHHHHHcCCCCccchhheeeecCcccc
Confidence 4567899999999999999999986 479999999987542 1234799999999999999999998543
Q ss_pred ---------------------------------CceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHH
Q 002238 664 ---------------------------------NEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE 710 (948)
Q Consensus 664 ---------------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~ 710 (948)
...++||||++ |+|.+.+..+... ...+++..+..++.|+++||+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~-~~~l~~~~~~~i~~qi~~aL~ 155 (383)
T 3eb0_A 78 KPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRS-GRSIPMNLISIYIYQLFRAVG 155 (383)
T ss_dssp --------------------------------CCEEEEEECCCS-EEHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHH
Confidence 23789999997 5888888664433 367999999999999999999
Q ss_pred HHHhccCCCeeecCCCCccEEEc-CCCCeEEeecCCceecCCCCCceeeeecccccccCceecccC-CCCchhhHHHHHH
Q 002238 711 YLHGLAHQSFIHRDLKPSNILLG-DDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTG-RVTTKVDVFSFGV 788 (948)
Q Consensus 711 ~LH~~~~~~ivHrDik~~Nill~-~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv 788 (948)
|||+ .+|+||||||+||+++ .++.+||+|||+++...... ......||+.|+|||++.+. .++.++||||+||
T Consensus 156 ~LH~---~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~ 230 (383)
T 3eb0_A 156 FIHS---LGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE--PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGC 230 (383)
T ss_dssp HHHT---TTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS--CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHH
T ss_pred HHHH---CcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC--CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHH
Confidence 9997 8999999999999998 68899999999998664433 23345689999999998775 4899999999999
Q ss_pred HHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCc--------cccccccCcccCCcc----chHHHHHHHHHHHHHhccc
Q 002238 789 ILMELITGRKALDESQPEESMHLVTWFRRIHLSK--------DSFHKAIDPTIDLNE----GILASISTVAELAGHCCAR 856 (948)
Q Consensus 789 ~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~----~~~~~~~~l~~li~~c~~~ 856 (948)
++|||++|+.||.+....+....+ +....... ..+.+..-+.+.... ........+.+++.+|++.
T Consensus 231 il~ell~g~~pf~~~~~~~~~~~i--~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 308 (383)
T 3eb0_A 231 VFGELILGKPLFSGETSIDQLVRI--IQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRY 308 (383)
T ss_dssp HHHHHHHSSCSSCCSSHHHHHHHH--HHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCS
T ss_pred HHHHHHhCCCCCCCCChHHHHHHH--HHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccC
Confidence 999999999999876654332211 11110000 000000001100000 0111234688999999999
Q ss_pred CCCCCCChHHHHH
Q 002238 857 EPYQRPDMGHAVN 869 (948)
Q Consensus 857 ~P~~RPt~~ev~~ 869 (948)
||.+|||+.|+++
T Consensus 309 dP~~R~t~~e~l~ 321 (383)
T 3eb0_A 309 EPDLRINPYEAMA 321 (383)
T ss_dssp SGGGSCCHHHHHT
T ss_pred ChhhCCCHHHHhc
Confidence 9999999999986
No 212
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=2.4e-38 Score=345.92 Aligned_cols=266 Identities=24% Similarity=0.404 Sum_probs=189.0
Q ss_pred hhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEE
Q 002238 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 669 (948)
..++|++.+.||+|+||.||+|... +++.||||++.... .....+++.+|+.++++++||||+++++++...+..++|
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEK-CQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV 91 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC-----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhh-cchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence 3578999999999999999999854 68999999886542 233456788999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHhhhhc---CCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCc
Q 002238 670 FEYMPQGTLSRHIFNWAEE---GLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLV 746 (948)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla 746 (948)
|||+++++|.+++...... ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 168 (303)
T 2vwi_A 92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK---NGQIHRDVKAGNILLGEDGSVQIADFGVS 168 (303)
T ss_dssp EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEECCCHHH
T ss_pred ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCCChhhEEEcCCCCEEEEeccch
Confidence 9999999999998653222 23568999999999999999999997 89999999999999999999999999998
Q ss_pred eecCCCCC----ceeeeecccccccCceeccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcC
Q 002238 747 RLAPEGKG----SIETRIAGTFGYLAPEYAVT-GRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLS 821 (948)
Q Consensus 747 ~~~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 821 (948)
+....... .......||+.|+|||++.+ ..++.++||||||+++|||++|+.||............ ....
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~-----~~~~ 243 (303)
T 2vwi_A 169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLT-----LQND 243 (303)
T ss_dssp HHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHH-----HTSS
T ss_pred heeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHH-----hccC
Confidence 75543211 12234579999999999876 56899999999999999999999999876544321111 1100
Q ss_pred ccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 822 KDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
........ ............+.+++.+|++.||.+||++.++++
T Consensus 244 ~~~~~~~~----~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 244 PPSLETGV----QDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp CCCTTC---------CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CCcccccc----ccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 00010000 000011122346889999999999999999999986
No 213
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.2e-37 Score=335.38 Aligned_cols=250 Identities=30% Similarity=0.417 Sum_probs=197.4
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcC-ChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 669 (948)
.++|++.+.||+|+||.||+|+.. +|+.||||++..... .....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 468999999999999999999876 799999999875421 123356789999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceec
Q 002238 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (948)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~ 749 (948)
|||+++++|.+++... ..+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.++|+|||++...
T Consensus 90 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~ 161 (276)
T 2h6d_A 90 MEYVSGGELFDYICKH-----GRVEEMEARRLFQQILSAVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMM 161 (276)
T ss_dssp EECCCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---HCSSCCCCCGGGEEECTTSCEEECCCCGGGCC
T ss_pred EeccCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChhhEEECCCCCEEEeeccccccc
Confidence 9999999999998541 468999999999999999999997 79999999999999999999999999999865
Q ss_pred CCCCCceeeeecccccccCceecccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCccccccc
Q 002238 750 PEGKGSIETRIAGTFGYLAPEYAVTGRV-TTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHKA 828 (948)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 828 (948)
.... ......||+.|+|||++.+..+ +.++||||||+++|||++|+.||........... +.. ....
T Consensus 162 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~---~~~---~~~~---- 229 (276)
T 2h6d_A 162 SDGE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKK---IRG---GVFY---- 229 (276)
T ss_dssp CC---------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH---HHH---CCCC----
T ss_pred CCCc--ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHH---hhc---Cccc----
Confidence 4432 2234568999999999987765 6899999999999999999999987543322111 111 0000
Q ss_pred cCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 829 IDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 829 ~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
+.. .....+.+++.+|++.||.+||++.++++.
T Consensus 230 ~~~---------~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 230 IPE---------YLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp CCT---------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred Cch---------hcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 001 112458899999999999999999999884
No 214
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=4e-38 Score=354.30 Aligned_cols=255 Identities=12% Similarity=0.076 Sum_probs=184.2
Q ss_pred cCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcC-ChhhHHHHHHHHHHHHhc--CCCceeeEE-------eEEE
Q 002238 593 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKV--RHRHLVALL-------GHCL 661 (948)
Q Consensus 593 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l--~H~niv~l~-------~~~~ 661 (948)
.+|+..+.||+|+||.||+|++. +|+.||||++..... .....+.+.+|+.+++.+ +||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 45888999999999999999875 789999999987643 234456788886555555 699988755 4444
Q ss_pred eC-----------------CceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHH------HHHHHHHHHHHHHHHhccCC
Q 002238 662 DG-----------------NEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRR------LTIALDVARGVEYLHGLAHQ 718 (948)
Q Consensus 662 ~~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~------~~i~~~i~~~l~~LH~~~~~ 718 (948)
.. ...++||||++ |+|.+++.... ..+++..+ +.++.||+.||+|||+ .
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~----~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~---~ 213 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD----FVYVFRGDEGILALHILTAQLIRLAANLQS---K 213 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH----HSCCCCHHHHHHHHHHHHHHHHHHHHHHHH---T
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc----cccchhhhhhhhhHHHHHHHHHHHHHHHHH---C
Confidence 33 23799999998 89999996532 23345555 7888999999999997 8
Q ss_pred CeeecCCCCccEEEcCCCCeEEeecCCceecCCCCCceeeeecccccccCceeccc--CCCCchhhHHHHHHHHHHHHhC
Q 002238 719 SFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVT--GRVTTKVDVFSFGVILMELITG 796 (948)
Q Consensus 719 ~ivHrDik~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~Gv~l~elltg 796 (948)
+|+||||||+|||++.++.+||+|||+++.... ......||+.|+|||++.+ ..++.++|||||||++|||++|
T Consensus 214 ~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg 289 (371)
T 3q60_A 214 GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGT----RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCL 289 (371)
T ss_dssp TEEETTCSGGGEEECTTSCEEECCGGGEEETTC----EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHS
T ss_pred CCccCcCCHHHEEECCCCCEEEEecceeeecCC----CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhC
Confidence 999999999999999999999999999986643 2224567899999999987 6799999999999999999999
Q ss_pred CCCCCCCCchhhhhHHHHHHHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 797 RKALDESQPEESMHLVTWFRRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 797 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
+.||....+..... ................. ........+.+++.+|++.||++||++.++++
T Consensus 290 ~~Pf~~~~~~~~~~---------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 290 FLPFGLVTPGIKGS---------WKRPSLRVPGTDSLAFG-SCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp SCSTTBCCTTCTTC---------CCBCCTTSCCCCSCCCT-TSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCCCCCcCcccccc---------hhhhhhhhccccccchh-hccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 99998764432100 00000000001111100 01123456889999999999999999999975
No 215
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=2.7e-37 Score=346.45 Aligned_cols=272 Identities=23% Similarity=0.315 Sum_probs=194.2
Q ss_pred HHHHhhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCc
Q 002238 587 VLRNVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNE 665 (948)
Q Consensus 587 ~l~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 665 (948)
......++|++.+.||+|+||.||+|+.. +|+.||||++... ......+.+|++.+..++||||+++++++...+.
T Consensus 17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~ 93 (360)
T 3e3p_A 17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQD---PRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGE 93 (360)
T ss_dssp HHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECC---TTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECS
T ss_pred hchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecC---ccccHHHHHHHHHHHhcCCCCcccHHHhhhcccc
Confidence 44566789999999999999999999875 6899999998653 2223456788888999999999999999976443
Q ss_pred -------eEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHH--hccCCCeeecCCCCccEEEcC-C
Q 002238 666 -------KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLH--GLAHQSFIHRDLKPSNILLGD-D 735 (948)
Q Consensus 666 -------~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH--~~~~~~ivHrDik~~Nill~~-~ 735 (948)
.++||||+++ +|.+.+.... .....+++..+..++.|++.||+||| + .+|+||||||+|||++. +
T Consensus 94 ~~~~~~~~~lv~e~~~~-~l~~~~~~~~-~~~~~~~~~~~~~~~~qi~~al~~lH~~~---~~ivH~Dlkp~NIll~~~~ 168 (360)
T 3e3p_A 94 RDRRDIYLNVVMEYVPD-TLHRCCRNYY-RRQVAPPPILIKVFLFQLIRSIGCLHLPS---VNVCHRDIKPHNVLVNEAD 168 (360)
T ss_dssp SCTTCEEEEEEEECCSC-BHHHHHHHHH-TTTCCCCHHHHHHHHHHHHHHHHHHTSTT---TCCBCSCCCGGGEEEETTT
T ss_pred ccccceeEEEEeecccc-cHHHHHHHHh-hcccCCCHHHHHHHHHHHHHHHHHHhCCC---CCeecCcCCHHHEEEeCCC
Confidence 7899999976 5655554322 23467899999999999999999999 6 89999999999999996 8
Q ss_pred CCeEEeecCCceecCCCCCceeeeecccccccCceecccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHH
Q 002238 736 MRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGR-VTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTW 814 (948)
Q Consensus 736 ~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~ 814 (948)
+.+||+|||+++...... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||...........+
T Consensus 169 ~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~-- 244 (360)
T 3e3p_A 169 GTLKLCDFGSAKKLSPSE--PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEI-- 244 (360)
T ss_dssp TEEEECCCTTCBCCCTTS--CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH--
T ss_pred CcEEEeeCCCceecCCCC--CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHH--
Confidence 999999999998665433 233456899999999987654 899999999999999999999999886654332222
Q ss_pred HHHhhcCccccccccCc-----------ccC----CccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 815 FRRIHLSKDSFHKAIDP-----------TID----LNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 815 ~~~~~~~~~~~~~~~~~-----------~~~----~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
.+............+++ ... ..........++.+++.+|++.||.+||++.|++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 245 VRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp HHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 11111110000000000 000 000111134578999999999999999999999873
No 216
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=2e-37 Score=342.43 Aligned_cols=268 Identities=24% Similarity=0.354 Sum_probs=204.2
Q ss_pred hhcCCcccceecccCceEEEEEEE--cCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhc---CCCceeeEEeEEE----
Q 002238 591 VTNNFSEENILGRGGFGTVYKGEL--HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV---RHRHLVALLGHCL---- 661 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~--~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l---~H~niv~l~~~~~---- 661 (948)
+.++|++.+.||+|+||.||+|.. .+|+.||||++............+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 457899999999999999999987 3688999999876533333334567788877776 8999999999987
Q ss_pred -eCCceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEE
Q 002238 662 -DGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKV 740 (948)
Q Consensus 662 -~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl 740 (948)
.....++||||++ |+|.+++.. .....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~---~~~~~~~~~~~~~~~~qi~~~l~~lH~---~gi~H~dlkp~Nili~~~~~~kl 161 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDK---VPEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKL 161 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHH---SCTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEE
T ss_pred CCCceEEEEEecCC-CCHHHHHHh---cccCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHHHeEEcCCCCEEE
Confidence 4567899999997 699998854 223458999999999999999999997 89999999999999999999999
Q ss_pred eecCCceecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhc
Q 002238 741 ADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHL 820 (948)
Q Consensus 741 ~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 820 (948)
+|||+++...... ......||+.|+|||++.+..++.++||||||+++|||++|+.||......+....+ ......
T Consensus 162 ~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i--~~~~~~ 237 (326)
T 1blx_A 162 ADFGLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKI--LDVIGL 237 (326)
T ss_dssp CSCCSCCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH--HHHHCC
T ss_pred ecCcccccccCCC--CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH--HHHcCC
Confidence 9999998654321 233457899999999999999999999999999999999999999876644322211 111110
Q ss_pred C-cccccccc-------C--cccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 821 S-KDSFHKAI-------D--PTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 821 ~-~~~~~~~~-------~--~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
. ...+.... . ...............+.+++.+|++.||++||++.++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 238 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp CCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0 00010000 0 000001111223456889999999999999999999875
No 217
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=2.1e-37 Score=371.68 Aligned_cols=260 Identities=23% Similarity=0.363 Sum_probs=207.8
Q ss_pred hhcCCcccceecccCceEEEEEEEc----CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCce
Q 002238 591 VTNNFSEENILGRGGFGTVYKGELH----DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEK 666 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 666 (948)
..++|++.+.||+|+||.||+|.+. .+..||||++... ......+.+.+|+.++++++||||+++++++. ++..
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~ 465 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC-TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 465 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSST-TCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSC
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCce
Confidence 3567999999999999999999874 2467999988653 23445678999999999999999999999985 5678
Q ss_pred EEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCc
Q 002238 667 LLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLV 746 (948)
Q Consensus 667 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla 746 (948)
++||||+++|+|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++
T Consensus 466 ~lv~E~~~~g~L~~~l~~----~~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDikp~NILl~~~~~vkL~DFG~a 538 (656)
T 2j0j_A 466 WIIMELCTLGELRSFLQV----RKFSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLS 538 (656)
T ss_dssp EEEEECCTTCBHHHHHHH----TTTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCCC
T ss_pred EEEEEcCCCCcHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchHhEEEeCCCCEEEEecCCC
Confidence 999999999999999853 23468999999999999999999997 89999999999999999999999999999
Q ss_pred eecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHhhcCcccc
Q 002238 747 RLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDESQPEESMHLVTWFRRIHLSKDSF 825 (948)
Q Consensus 747 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 825 (948)
+..............+|+.|+|||++.+..++.++||||||+++|||++ |..||.+....+....+ .... .
T Consensus 539 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i---~~~~--~--- 610 (656)
T 2j0j_A 539 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI---ENGE--R--- 610 (656)
T ss_dssp CSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH---HHTC--C---
T ss_pred eecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH---HcCC--C---
Confidence 8765544333344567889999999999999999999999999999997 99999876544322111 1100 0
Q ss_pred ccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhhh
Q 002238 826 HKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVEL 877 (948)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~~ 877 (948)
.... ...+..+.+++.+|++.||++||++.++++.|+.+.+.
T Consensus 611 -~~~~---------~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~ 652 (656)
T 2j0j_A 611 -LPMP---------PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 652 (656)
T ss_dssp -CCCC---------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -CCCC---------ccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 0001 12234688999999999999999999999999998653
No 218
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=4.5e-38 Score=343.57 Aligned_cols=253 Identities=24% Similarity=0.362 Sum_probs=199.3
Q ss_pred hhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEE
Q 002238 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 669 (948)
..++|++.+.||+|+||.||+|+.. +++.||+|++... .....+.+.+|+++++.++||||+++++++.+++..++|
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 94 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIM 94 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCC--CHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEE
Confidence 3578999999999999999999876 6899999998754 344567899999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceec
Q 002238 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (948)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~ 749 (948)
|||+++++|.+++.. ....+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++...
T Consensus 95 ~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 167 (302)
T 2j7t_A 95 IEFCPGGAVDAIMLE----LDRGLTEPQIQVVCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKN 167 (302)
T ss_dssp EECCTTEEHHHHHHH----HTSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCCHHHHHH
T ss_pred EEeCCCCcHHHHHHh----hccCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEECCCCCEEEEECCCCccc
Confidence 999999999988753 12568999999999999999999997 89999999999999999999999999987632
Q ss_pred CCCCCceeeeecccccccCceec-----ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCccc
Q 002238 750 PEGKGSIETRIAGTFGYLAPEYA-----VTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDS 824 (948)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 824 (948)
.... .......||+.|+|||++ .+..++.++||||||+++|||++|+.||.......... ......
T Consensus 168 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~------~~~~~~-- 238 (302)
T 2j7t_A 168 LKTL-QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLL------KIAKSD-- 238 (302)
T ss_dssp HHHH-HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH------HHHHSC--
T ss_pred cccc-cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHH------HHhccC--
Confidence 1110 112235689999999998 36678999999999999999999999998765432211 111000
Q ss_pred cccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 825 FHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
. +... ........+.+++.+|++.||++||++.++++
T Consensus 239 ~-----~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 239 P-----PTLL---TPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp C-----CCCS---SGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred C-----cccC---CccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 0 0000 01122345889999999999999999999876
No 219
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.1e-37 Score=340.89 Aligned_cols=254 Identities=26% Similarity=0.424 Sum_probs=198.1
Q ss_pred HhhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEe-----
Q 002238 590 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLD----- 662 (948)
Q Consensus 590 ~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~----- 662 (948)
...++|++.+.||+|+||.||+|+.. +|+.||||++... ......+.+|+.+++++ +||||+++++++..
T Consensus 21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~ 97 (326)
T 2x7f_A 21 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT---GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG 97 (326)
T ss_dssp CCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---SSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--C
T ss_pred CCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecC---cccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCcc
Confidence 45678999999999999999999874 7899999998753 23457889999999999 89999999999987
Q ss_pred -CCceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEe
Q 002238 663 -GNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVA 741 (948)
Q Consensus 663 -~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~ 741 (948)
.+..++||||+++|+|.+++... ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~kl~ 171 (326)
T 2x7f_A 98 MDDQLWLVMEFCGAGSVTDLIKNT---KGNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLV 171 (326)
T ss_dssp CCCEEEEEEECCTTEEHHHHHHHS---GGGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEEC
T ss_pred ccceEEEEEEcCCCCcHHHHHHhc---ccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCcHHHEEEcCCCCEEEe
Confidence 46789999999999999998642 22468899999999999999999997 899999999999999999999999
Q ss_pred ecCCceecCCCCCceeeeecccccccCceecc-----cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHH
Q 002238 742 DFGLVRLAPEGKGSIETRIAGTFGYLAPEYAV-----TGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFR 816 (948)
Q Consensus 742 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~ 816 (948)
|||++........ ......||+.|+|||++. +..++.++||||||+++|||++|+.||...........+ .
T Consensus 172 Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~---~ 247 (326)
T 2x7f_A 172 DFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI---P 247 (326)
T ss_dssp CCTTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH---H
T ss_pred eCcCceecCcCcc-ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHh---h
Confidence 9999886543221 233456999999999987 567899999999999999999999999876543321111 1
Q ss_pred HhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 817 RIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
. ......... .....+.+++.+|++.||.+||++.++++.
T Consensus 248 ~-----~~~~~~~~~---------~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 248 R-----NPAPRLKSK---------KWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp H-----SCCCCCSCS---------CSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred c-----CccccCCcc---------ccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0 000011111 112458899999999999999999999873
No 220
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.3e-37 Score=374.67 Aligned_cols=245 Identities=24% Similarity=0.342 Sum_probs=203.9
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcC-ChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCceEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKLL 668 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~l 668 (948)
.++|++.+.||+|+||.||+|+.+ +++.||||++++... .....+.+..|..++..+ +||+|+++++++.+.+..|+
T Consensus 340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~l 419 (674)
T 3pfq_A 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 419 (674)
T ss_dssp CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEE
T ss_pred ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEE
Confidence 468999999999999999999875 688999999976422 233456788999999988 79999999999999999999
Q ss_pred EEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCcee
Q 002238 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 748 (948)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~ 748 (948)
||||+++|+|.+++... ..+++.+++.++.||+.||+|||+ .+||||||||+|||++.++.+||+|||+++.
T Consensus 420 V~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~gIiHrDLKp~NILl~~~g~ikL~DFGla~~ 491 (674)
T 3pfq_A 420 VMEYVNGGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKE 491 (674)
T ss_dssp EEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TSEECCCCCSTTEEECSSSCEEECCCTTCEE
T ss_pred EEeCcCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeEeccCChhhEEEcCCCcEEEeecceeec
Confidence 99999999999998542 468999999999999999999997 8999999999999999999999999999986
Q ss_pred cCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCccccccc
Q 002238 749 APEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHKA 828 (948)
Q Consensus 749 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 828 (948)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.+....+... .+......+.
T Consensus 492 ~~~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~------~i~~~~~~~p-- 562 (674)
T 3pfq_A 492 NIWDG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQ------SIMEHNVAYP-- 562 (674)
T ss_dssp CCCTT-CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH------HHHSSCCCCC--
T ss_pred cccCC-cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHH------HHHhCCCCCC--
Confidence 43332 23445789999999999999999999999999999999999999998765443221 1221111111
Q ss_pred cCcccCCccchHHHHHHHHHHHHHhcccCCCCCCCh
Q 002238 829 IDPTIDLNEGILASISTVAELAGHCCAREPYQRPDM 864 (948)
Q Consensus 829 ~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~ 864 (948)
.....++.+++.+|++.||++||++
T Consensus 563 -----------~~~s~~~~~li~~lL~~dP~~R~~~ 587 (674)
T 3pfq_A 563 -----------KSMSKEAVAICKGLMTKHPGKRLGC 587 (674)
T ss_dssp -----------TTSCHHHHHHHHHHSCSSSTTCTTC
T ss_pred -----------ccCCHHHHHHHHHHccCCHHHCCCC
Confidence 1123458899999999999999998
No 221
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=2.1e-37 Score=353.59 Aligned_cols=263 Identities=22% Similarity=0.342 Sum_probs=197.1
Q ss_pred cCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCC------c
Q 002238 593 NNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGN------E 665 (948)
Q Consensus 593 ~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------~ 665 (948)
.+|+..+.||+|+||.||+|++. +|+.||||++.... ..+.+|+++++.++|||||++++++.... .
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~------~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~ 127 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 127 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT------TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc------hhHHHHHHHHHHcCCCCccceeeEEeccCCCCccee
Confidence 46888999999999999999985 68999999987532 22357999999999999999999886421 2
Q ss_pred eEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCC-CCeEEeecC
Q 002238 666 KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD-MRAKVADFG 744 (948)
Q Consensus 666 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~-~~~kl~DfG 744 (948)
.++||||+++ ++.+.+..+. .....+++..+..++.||++||+|||+ .+|+||||||+|||++.+ +.+||+|||
T Consensus 128 ~~lv~e~~~~-~l~~~~~~~~-~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NILl~~~~~~~kl~DFG 202 (420)
T 1j1b_A 128 LNLVLDYVPE-TVYRVARHYS-RAKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFG 202 (420)
T ss_dssp EEEEEECCCE-EHHHHHHHHH-HTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred EEeehhcccc-cHHHHHHHHh-hccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChhhEEEeCCCCeEEeccch
Confidence 5799999975 6766665432 234679999999999999999999997 899999999999999965 568999999
Q ss_pred CceecCCCCCceeeeecccccccCceecccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcC--
Q 002238 745 LVRLAPEGKGSIETRIAGTFGYLAPEYAVTG-RVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLS-- 821 (948)
Q Consensus 745 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-- 821 (948)
+++...... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||.+....+.. ...+......
T Consensus 203 ~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l--~~i~~~lg~p~~ 278 (420)
T 1j1b_A 203 SAKQLVRGE--PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL--VEIIKVLGTPTR 278 (420)
T ss_dssp TCEECCTTC--CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH--HHHHHHHCSCCH
T ss_pred hhhhcccCC--CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHH--HHHHHHhCCCCH
Confidence 999764433 23345789999999998765 7999999999999999999999999876543322 2222111000
Q ss_pred ------ccccccccCcccCCcc----chHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 822 ------KDSFHKAIDPTIDLNE----GILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 822 ------~~~~~~~~~~~~~~~~----~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
...+.+...+.+.... .......++.+|+.+|++.||.+||++.|++++
T Consensus 279 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 279 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp HHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 0001111111111000 001123568899999999999999999999864
No 222
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=2.2e-37 Score=347.38 Aligned_cols=266 Identities=21% Similarity=0.338 Sum_probs=204.1
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC-----Cc
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG-----NE 665 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~ 665 (948)
.++|++.+.||+|+||.||+|... +++.||||++.... .....+.+.+|++++++++||||+++++++... ..
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT-CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEecccc-CcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 468999999999999999999865 68899999987532 344457899999999999999999999999765 36
Q ss_pred eEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCC
Q 002238 666 KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGL 745 (948)
Q Consensus 666 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGl 745 (948)
.++||||++ |+|.+++.. ..+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 105 ~~iv~e~~~-~~L~~~l~~------~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 174 (364)
T 3qyz_A 105 VYIVQDLME-TDLYKLLKT------QHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGL 174 (364)
T ss_dssp EEEEEECCS-EEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEEcccC-cCHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChHhEEECCCCCEEEEeCcc
Confidence 799999996 599888843 468999999999999999999997 8999999999999999999999999999
Q ss_pred ceecCCCCCc--eeeeecccccccCceeccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCc
Q 002238 746 VRLAPEGKGS--IETRIAGTFGYLAPEYAVT-GRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSK 822 (948)
Q Consensus 746 a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 822 (948)
++........ ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+....+... .....
T Consensus 175 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~--~~~~~ 252 (364)
T 3qyz_A 175 ARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI--LGSPS 252 (364)
T ss_dssp CEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHH--HCSCC
T ss_pred eEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHH--hCCCC
Confidence 9865433221 1244579999999998754 45899999999999999999999999877654433222110 00000
Q ss_pred c-ccc------------cccC-cccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 823 D-SFH------------KAID-PTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 823 ~-~~~------------~~~~-~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
. .+. .... ..............++.+++.+|++.||.+|||+.|+++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 253 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp HHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0 000 0000 0000011111223568899999999999999999999873
No 223
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=5.6e-38 Score=348.99 Aligned_cols=257 Identities=23% Similarity=0.331 Sum_probs=200.9
Q ss_pred hhcCCcccceecccCceEEEEEEE-cCCcEEEEEEeecCcCChhhHHHHHHHHHH-HHhcCCCceeeEEeEEEeCCceEE
Q 002238 591 VTNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVISGKGLTEFKSEIAV-LTKVRHRHLVALLGHCLDGNEKLL 668 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~E~~~-l~~l~H~niv~l~~~~~~~~~~~l 668 (948)
..++|++.+.||+|+||.||+|.. .+|+.||||++...... ....++..|+.+ ++.++||||+++++++.+++..++
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~l 127 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS-QEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI 127 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCC-HHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCc-HHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEE
Confidence 457899999999999999999987 47899999999765333 334555566655 778899999999999999999999
Q ss_pred EEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCcee
Q 002238 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 748 (948)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~ 748 (948)
||||+++ +|.+++..... ....+++..++.++.||+.||+|||+ +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 128 v~e~~~~-~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~--~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~ 203 (340)
T 3an0_A 128 CMELMDT-SLDKFYKQVID-KGQTIPEDILGKIAVSIVKALEHLHS--KLSVIHRDVKPSNVLINALGQVKMCDFGISGY 203 (340)
T ss_dssp EECCCSE-EHHHHHHHHHH-TSCCCCHHHHHHHHHHHHHHHHHHHH--HTCCCCCSCCSTTEEECSTTCEEECCCSHHHH
T ss_pred EHHHhhC-cHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhh--cCCeecCCCCHHHEEECCCCCEEEeeCCCcee
Confidence 9999975 99888865332 34679999999999999999999997 23999999999999999999999999999986
Q ss_pred cCCCCCceeeeecccccccCceecc----cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCccc
Q 002238 749 APEGKGSIETRIAGTFGYLAPEYAV----TGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDS 824 (948)
Q Consensus 749 ~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 824 (948)
..... ......||+.|+|||++. ...++.++|||||||++|||++|+.||........ ...... ..
T Consensus 204 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~-~~~~~~---~~---- 273 (340)
T 3an0_A 204 LVDSV--AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQ-QLKQVV---EE---- 273 (340)
T ss_dssp HSCHH--HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHH-HHHHHH---HS----
T ss_pred ccccc--ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHH-HHHHHh---cC----
Confidence 54321 223346999999999964 34789999999999999999999999986432211 111111 00
Q ss_pred cccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 825 FHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
..+... ......++.+++.+|++.||++||++.++++.
T Consensus 274 ----~~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 274 ----PSPQLP----ADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp ----CCCCCC----GGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred ----CCCCCC----cccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 001111 01123468899999999999999999999873
No 224
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1.4e-37 Score=342.84 Aligned_cols=255 Identities=26% Similarity=0.354 Sum_probs=197.9
Q ss_pred HhhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCC------hhhHHHHHHHHHHHHhcCCCceeeEEeEEEe
Q 002238 590 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS------GKGLTEFKSEIAVLTKVRHRHLVALLGHCLD 662 (948)
Q Consensus 590 ~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~------~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 662 (948)
.+.++|++.+.||+|+||.||+|... +++.||||++...... ......+.+|++++++++||||+++++++..
T Consensus 7 ~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 86 (322)
T 2ycf_A 7 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 86 (322)
T ss_dssp HHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEES
T ss_pred hhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcC
Confidence 34578999999999999999999875 6899999998654221 1223458899999999999999999999876
Q ss_pred CCceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCC---eE
Q 002238 663 GNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR---AK 739 (948)
Q Consensus 663 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~---~k 739 (948)
+. .++||||+++++|.+++.. ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++. +|
T Consensus 87 ~~-~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~k 157 (322)
T 2ycf_A 87 ED-YYIVLELMEGGELFDKVVG-----NKRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIK 157 (322)
T ss_dssp SS-EEEEEECCTTEETHHHHST-----TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSSSCCEE
T ss_pred Cc-eEEEEecCCCCcHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEecCCCCCeEE
Confidence 54 8999999999999988732 3578999999999999999999997 89999999999999987654 99
Q ss_pred EeecCCceecCCCCCceeeeecccccccCceecc---cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHH
Q 002238 740 VADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAV---TGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFR 816 (948)
Q Consensus 740 l~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~ 816 (948)
|+|||+++...... ......||+.|+|||++. ...++.++||||||+++|||++|+.||........ ....+.
T Consensus 158 l~Dfg~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~~~ 233 (322)
T 2ycf_A 158 ITDFGHSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS--LKDQIT 233 (322)
T ss_dssp ECCCTTCEECCCCH--HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSC--HHHHHH
T ss_pred EccCccceeccccc--ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHH--HHHHHH
Confidence 99999998764421 223456999999999974 46789999999999999999999999976543221 111111
Q ss_pred HhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 817 RIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
.. .... . ..........+.+++.+|++.||++||++.++++
T Consensus 234 ~~---~~~~----~-----~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 234 SG---KYNF----I-----PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp HT---CCCC----C-----HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred hC---cccc----C-----chhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 10 0000 0 0111122356889999999999999999999876
No 225
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=3.7e-37 Score=346.23 Aligned_cols=263 Identities=21% Similarity=0.355 Sum_probs=201.8
Q ss_pred hhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCce---
Q 002238 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEK--- 666 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~--- 666 (948)
+.++|...+.||+|+||.||+|... +|+.||||++..........+.+.+|+.+++.++||||+++++++...+..
T Consensus 40 l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 119 (371)
T 4exu_A 40 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred ccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence 4578999999999999999999865 689999999987654555568899999999999999999999999877654
Q ss_pred ---EEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeec
Q 002238 667 ---LLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADF 743 (948)
Q Consensus 667 ---~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~Df 743 (948)
++||||+. ++|.+.+. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 120 ~~~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kL~Df 188 (371)
T 4exu_A 120 YDFYLVMPFMQ-TDLQKIMG-------MEFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDF 188 (371)
T ss_dssp CCCEEEEECCC-EEHHHHTT-------SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECST
T ss_pred eeEEEEEcccc-ccHHHHhh-------cCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCcCHHHeEECCCCCEEEEec
Confidence 99999997 68877662 358999999999999999999997 79999999999999999999999999
Q ss_pred CCceecCCCCCceeeeecccccccCceeccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCc
Q 002238 744 GLVRLAPEGKGSIETRIAGTFGYLAPEYAVT-GRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSK 822 (948)
Q Consensus 744 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 822 (948)
|+++..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+....+ ........
T Consensus 189 g~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i--~~~~~~~~ 262 (371)
T 4exu_A 189 GLARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQI--LKVTGVPG 262 (371)
T ss_dssp TCC------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH--HHHHCCCC
T ss_pred CcccccccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH--HHHhCCCc
Confidence 999855332 334578999999999987 67899999999999999999999999876543322211 11110000
Q ss_pred ccccccc------------Cc--ccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 823 DSFHKAI------------DP--TIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 823 ~~~~~~~------------~~--~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
..+...+ .. ..............+.+++.+|++.||++||+++|+++.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 263 TEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 0000000 00 000000111224568899999999999999999999874
No 226
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=3.4e-37 Score=341.15 Aligned_cols=260 Identities=17% Similarity=0.295 Sum_probs=199.9
Q ss_pred hcCCcccceecccCceEEEEEEE-cCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcC-CCceeeEEeEEEe--CCceE
Q 002238 592 TNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR-HRHLVALLGHCLD--GNEKL 667 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~--~~~~~ 667 (948)
.++|++.+.||+|+||.||+|.. .+++.||||++... ..+.+.+|++++++++ ||||+++++++.+ ....+
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 109 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV-----KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPA 109 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-----CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc-----chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceE
Confidence 36799999999999999999986 47899999998642 2467899999999997 9999999999987 66789
Q ss_pred EEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCC-CeEEeecCCc
Q 002238 668 LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM-RAKVADFGLV 746 (948)
Q Consensus 668 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~-~~kl~DfGla 746 (948)
+||||+++++|.+++ ..+++.++..++.|++.||+|||+ .+|+||||||+|||++.++ .+||+|||++
T Consensus 110 lv~e~~~~~~l~~~~--------~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a 178 (330)
T 3nsz_A 110 LVFEHVNNTDFKQLY--------QTLTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 178 (330)
T ss_dssp EEEECCCCCCHHHHG--------GGCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCTTC
T ss_pred EEEeccCchhHHHHH--------HhCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEcCCCCEEEEEeCCCc
Confidence 999999999998887 247889999999999999999997 8999999999999999777 8999999999
Q ss_pred eecCCCCCceeeeecccccccCceeccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhh-hH----------HHH
Q 002238 747 RLAPEGKGSIETRIAGTFGYLAPEYAVT-GRVTTKVDVFSFGVILMELITGRKALDESQPEESM-HL----------VTW 814 (948)
Q Consensus 747 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~-~~----------~~~ 814 (948)
+....... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......... .. ..+
T Consensus 179 ~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 256 (330)
T 3nsz_A 179 EFYHPGQE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 256 (330)
T ss_dssp EECCTTCC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHH
T ss_pred eEcCCCCc--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhH
Confidence 87654332 334568999999999877 67899999999999999999999999654432111 00 011
Q ss_pred HHHhhcCc-cccccccC-------cccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 815 FRRIHLSK-DSFHKAID-------PTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 815 ~~~~~~~~-~~~~~~~~-------~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
........ ..+..... ..............++.+++.+|++.||++|||++|+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 257 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 11000000 00000000 000001111123456899999999999999999999987
No 227
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=3.2e-37 Score=344.86 Aligned_cols=268 Identities=25% Similarity=0.352 Sum_probs=202.3
Q ss_pred hhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeC-----C
Q 002238 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDG-----N 664 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~ 664 (948)
+.++|++.+.||+|+||.||+|... +|+.||||++... ........+.+|++++++++||||+++++++..+ .
T Consensus 9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 87 (353)
T 2b9h_A 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF-DKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFN 87 (353)
T ss_dssp SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCC
T ss_pred cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccc-ccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccc
Confidence 4578999999999999999999875 6899999998643 2344567788999999999999999999988764 6
Q ss_pred ceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecC
Q 002238 665 EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 744 (948)
Q Consensus 665 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfG 744 (948)
..++||||++ |+|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 88 ~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg 157 (353)
T 2b9h_A 88 EVYIIQELMQ-TDLHRVIST------QMLSDDHIQYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFG 157 (353)
T ss_dssp CEEEEECCCS-EEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCT
T ss_pred eEEEEEeccC-ccHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEcCCCcEEEEecc
Confidence 7899999996 689888743 468999999999999999999997 899999999999999999999999999
Q ss_pred CceecCCCCCc---------eeeeecccccccCceeccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHH
Q 002238 745 LVRLAPEGKGS---------IETRIAGTFGYLAPEYAVT-GRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTW 814 (948)
Q Consensus 745 la~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~ 814 (948)
+++........ ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+....+..
T Consensus 158 ~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~ 237 (353)
T 2b9h_A 158 LARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFG 237 (353)
T ss_dssp TCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred cccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHH
Confidence 99865432211 1223568999999998765 6789999999999999999999999987654332221111
Q ss_pred HHHhhcCcccccc--------c---c--CcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 815 FRRIHLSKDSFHK--------A---I--DPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 815 ~~~~~~~~~~~~~--------~---~--~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
............. . + .+.............++.+++.+|++.||++||+++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 238 IIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp HHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000000000000 0 0 0000000111123456889999999999999999999987
No 228
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=4.6e-37 Score=341.35 Aligned_cols=265 Identities=23% Similarity=0.347 Sum_probs=205.8
Q ss_pred hhcCCcccceecccCceEEEEEEE-c-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCc------eeeEEeEEEe
Q 002238 591 VTNNFSEENILGRGGFGTVYKGEL-H-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRH------LVALLGHCLD 662 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~-~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~n------iv~l~~~~~~ 662 (948)
..++|++.+.||+|+||.||+|.. + +++.||||+++. .....+.+.+|+++++.++|++ ++++++++.+
T Consensus 12 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~ 88 (339)
T 1z57_A 12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKN---VDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEH 88 (339)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECS---SHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEE
T ss_pred ccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEec---CCchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccccc
Confidence 356899999999999999999986 3 688999999864 3344577899999999997664 9999999999
Q ss_pred CCceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcC--------
Q 002238 663 GNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD-------- 734 (948)
Q Consensus 663 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~-------- 734 (948)
.+..++||||+ +++|.+++.. .....+++.++..++.|++.||+|||+ .+|+||||||+||+++.
T Consensus 89 ~~~~~lv~e~~-~~~l~~~l~~---~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~ 161 (339)
T 1z57_A 89 HGHICIVFELL-GLSTYDFIKE---NGFLPFRLDHIRKMAYQICKSVNFLHS---NKLTHTDLKPENILFVQSDYTEAYN 161 (339)
T ss_dssp TTEEEEEEECC-CCBHHHHHHH---TTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCCCEEEEEC
T ss_pred CCcEEEEEcCC-CCCHHHHHHh---cCCCCCcHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeccccccccC
Confidence 99999999999 8899998854 233578999999999999999999997 89999999999999987
Q ss_pred -----------CCCeEEeecCCceecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 002238 735 -----------DMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDES 803 (948)
Q Consensus 735 -----------~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~ 803 (948)
++.+||+|||+++..... .....||+.|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 162 ~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 237 (339)
T 1z57_A 162 PKIKRDERTLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTH 237 (339)
T ss_dssp ----CEEEEESCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred CccccccccccCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 668999999999865432 23457899999999999999999999999999999999999999876
Q ss_pred CchhhhhHHHHHHHhh--------cCcccc-----------------ccccCcccCCccchHHHHHHHHHHHHHhcccCC
Q 002238 804 QPEESMHLVTWFRRIH--------LSKDSF-----------------HKAIDPTIDLNEGILASISTVAELAGHCCAREP 858 (948)
Q Consensus 804 ~~~~~~~~~~~~~~~~--------~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P 858 (948)
...+....+....... .....+ .....+.............++.+++.+|++.||
T Consensus 238 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP 317 (339)
T 1z57_A 238 DSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDP 317 (339)
T ss_dssp CHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSST
T ss_pred ChHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCc
Confidence 6544322221111000 000000 000000000011112345678999999999999
Q ss_pred CCCCChHHHHH
Q 002238 859 YQRPDMGHAVN 869 (948)
Q Consensus 859 ~~RPt~~ev~~ 869 (948)
.+||++.|+++
T Consensus 318 ~~Rpt~~ell~ 328 (339)
T 1z57_A 318 AKRITLREALK 328 (339)
T ss_dssp TTSCCHHHHTT
T ss_pred ccccCHHHHhc
Confidence 99999999976
No 229
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=8.7e-37 Score=379.86 Aligned_cols=393 Identities=19% Similarity=0.216 Sum_probs=261.4
Q ss_pred CCccceEEeCCCCEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCC-C-CcCCCCCCcEEEcccccccCCCCcc
Q 002238 57 CKWNHVVCIEDKRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPL-P-SLNGLASLEVVMLSNNQFTSVPSDF 134 (948)
Q Consensus 57 C~w~gv~c~~~~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~-p-~~~~l~~L~~L~L~~N~l~~~~~~~ 134 (948)
|.|+.|-+ -..+++.|+|++|.+++..|..|.++++|++|+|++|.+.+.+ | .|.++++|++|+|++|.++++.|..
T Consensus 14 ~~L~~vP~-lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~ 92 (844)
T 3j0a_A 14 CNLTQVPQ-VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDA 92 (844)
T ss_dssp CCSSCCCS-SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTS
T ss_pred CCCCCCCC-CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhH
Confidence 45666655 4578999999999999888889999999999999999666544 4 6888999999999999999998888
Q ss_pred ccCCCCCCEEEccCCCCCCCCCCcc--ccCCCCCCEEEccCccccccCC-CCCCCCCCCCCcEEEcccccccccCCCCcc
Q 002238 135 FTGLSSLQSIEIDNNPFSSWEIPQS--LRNASGLQNFSANSANITGQIP-SFFGPDEFPGLTILHLAFNQLIGGLPASFS 211 (948)
Q Consensus 135 ~~~l~~L~~L~Ls~N~l~~~~~p~~--~~~l~~L~~L~l~~n~l~~~~p-~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 211 (948)
|+++++|++|+|++|++++ .+|.. +.++++|++|+|++|.+++..+ ..|+ .+++|++|+|++|++++..+..+.
T Consensus 93 ~~~l~~L~~L~Ls~n~l~~-~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~--~L~~L~~L~Ls~N~i~~~~~~~l~ 169 (844)
T 3j0a_A 93 FQGLFHLFELRLYFCGLSD-AVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFG--KLNSLKSIDFSSNQIFLVCEHELE 169 (844)
T ss_dssp SCSCSSCCCEECTTCCCSS-CCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGG--TCSSCCEEEEESSCCCCCCSGGGH
T ss_pred ccCCcccCEeeCcCCCCCc-ccccCccccccCCCCEEECCCCcccccccchhHh--hCCCCCEEECCCCcCCeeCHHHcc
Confidence 9999999999999999886 45554 8889999999999999987765 4566 788888888888888776665443
Q ss_pred c---cc------------------------------ccceeccCCC----------------------------------
Q 002238 212 G---SQ------------------------------IQSLWVNGQN---------------------------------- 224 (948)
Q Consensus 212 ~---~~------------------------------l~~l~~~~~~---------------------------------- 224 (948)
. .+ ++.|++.++.
T Consensus 170 ~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~ 249 (844)
T 3j0a_A 170 PLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGF 249 (844)
T ss_dssp HHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSC
T ss_pred cccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccc
Confidence 2 11 3334333321
Q ss_pred -------------------------CCCccCCCccccccCCCccEEEccCCcccccCC-CCCCCCCCcEEeccCCccccc
Q 002238 225 -------------------------GNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGP 278 (948)
Q Consensus 225 -------------------------~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~ 278 (948)
.+......+..|.++++|+.|+|++|++++..+ .|.++++|+.|+|++|.+++.
T Consensus 250 ~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 329 (844)
T 3j0a_A 250 HNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGEL 329 (844)
T ss_dssp SSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCC
T ss_pred cccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCcc
Confidence 111111122345566667777777777766555 466677777777777777766
Q ss_pred cchhhhCCCCCcEEEcccCcccccCCC-CCCccccccccccCCCCCCCCCCCchhhhhh---------------------
Q 002238 279 VPDSLVKLESLKIVNMTNNLLQGPVPE-FDRSVSLDMAKGSNNFCLPSPGACDPRLNAL--------------------- 336 (948)
Q Consensus 279 ~p~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l--------------------- 336 (948)
.|..+..+++|+.|+|++|++++..+. +..+.+|..++..+|....++.. +.+..+
T Consensus 330 ~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~--~~L~~L~l~~N~l~~l~~~~~~l~~L~ 407 (844)
T 3j0a_A 330 YSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFI--PSIPDIFLSGNKLVTLPKINLTANLIH 407 (844)
T ss_dssp CSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSC--CSCSEEEEESCCCCCCCCCCTTCCEEE
T ss_pred CHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccCC--CCcchhccCCCCcccccccccccceee
Confidence 666777777777777777777665553 45555666666555544332210 000000
Q ss_pred ---------HHHHHhhCCcchhccccCC-------------------------CCCCCCc-----cceeecCCceEEEEc
Q 002238 337 ---------LSVVKLMGYPQRFAENWKG-------------------------NDPCSDW-----IGVTCTKGNITVINF 377 (948)
Q Consensus 337 ---------~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~-----~~~~~~~~~L~~L~l 377 (948)
.........+.-...+..+ +.....| ...+..+++|+.|+|
T Consensus 408 ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~L 487 (844)
T 3j0a_A 408 LSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYL 487 (844)
T ss_dssp CCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCC
T ss_pred cccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEEC
Confidence 0000000000000000000 0000000 022445677888888
Q ss_pred cCCcccccCCccccCccccceEeCccccccccCCcCCcCCCCCcEEEccCCcccCCCCC-CCcccccccCCCCCCCCccC
Q 002238 378 QKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPS-FKSNAIVNTDGNPDIGKEKS 456 (948)
Q Consensus 378 s~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~ip~-~~~~~~~~~~gnp~~~~~~~ 456 (948)
++|++++..|..|.++++|+.|+|++|+|++..|..+. ++|++|||++|+|+|.+|. +.....+.+.|||+.|.++.
T Consensus 488 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 488 NHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFICECEL 565 (844)
T ss_dssp CHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCSSCCEEEEEEECCCCSSSC
T ss_pred CCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhCCcCEEEecCCCccccccc
Confidence 88888888888888888888888888888866666555 7888888888888888775 45567889999999997764
Q ss_pred C
Q 002238 457 S 457 (948)
Q Consensus 457 ~ 457 (948)
.
T Consensus 566 ~ 566 (844)
T 3j0a_A 566 S 566 (844)
T ss_dssp C
T ss_pred H
Confidence 3
No 230
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.8e-37 Score=336.07 Aligned_cols=256 Identities=25% Similarity=0.348 Sum_probs=207.6
Q ss_pred HHhhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceE
Q 002238 589 RNVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKL 667 (948)
Q Consensus 589 ~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 667 (948)
....++|++.+.||+|+||.||+|+.. +++.||||++..........+.+.+|++++++++||||+++++++.+.+..+
T Consensus 18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 97 (287)
T 2wei_A 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFY 97 (287)
T ss_dssp HHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred HHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEE
Confidence 345678999999999999999999875 7899999999776545556788999999999999999999999999999999
Q ss_pred EEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCC---CCeEEeecC
Q 002238 668 LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD---MRAKVADFG 744 (948)
Q Consensus 668 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~---~~~kl~DfG 744 (948)
+||||+++++|.+.+... ..+++.+++.++.|++.||+|||+ .+++||||||+||+++.+ +.+||+|||
T Consensus 98 lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg 169 (287)
T 2wei_A 98 IVGELYTGGELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFG 169 (287)
T ss_dssp EEECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECSTT
T ss_pred EEEEccCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChhhEEEecCCCcccEEEeccC
Confidence 999999999999887531 468999999999999999999997 899999999999999754 469999999
Q ss_pred CceecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCccc
Q 002238 745 LVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDS 824 (948)
Q Consensus 745 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 824 (948)
+++...... ......||+.|+|||++.+ .++.++||||||+++|||++|+.||......+.... +......
T Consensus 170 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~------~~~~~~~ 240 (287)
T 2wei_A 170 LSTCFQQNT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKR------VETGKYA 240 (287)
T ss_dssp GGGTBCCCS--SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH------HHHCCCC
T ss_pred cceeecCCC--ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHH------HHcCCCC
Confidence 988654432 2233468999999998865 589999999999999999999999987654332111 1111100
Q ss_pred cccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 825 FHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
. .. ........++.+++.+|++.||++||++.++++.
T Consensus 241 ~------~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 241 F------DL---PQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp C------CS---GGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred C------Cc---hhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 0 00 0011223468899999999999999999999873
No 231
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.5e-37 Score=353.34 Aligned_cols=264 Identities=22% Similarity=0.265 Sum_probs=201.6
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcC--------CCceeeEEeEEE-
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR--------HRHLVALLGHCL- 661 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--------H~niv~l~~~~~- 661 (948)
.++|++.+.||+|+||.||+|+.. +++.||||++.. .....+.+.+|+++++.++ ||||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~ 112 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKS---AEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKI 112 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEec---CCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceee
Confidence 478999999999999999999864 688999999874 3445677899999999995 788999999987
Q ss_pred ---eCCceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCC-CeeecCCCCccEEEcCCC-
Q 002238 662 ---DGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ-SFIHRDLKPSNILLGDDM- 736 (948)
Q Consensus 662 ---~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~ivHrDik~~Nill~~~~- 736 (948)
++...++||||+ +++|.+.+.. .....+++..++.++.||+.||+|||+ + +|+||||||+|||++.++
T Consensus 113 ~~~~~~~~~lv~e~~-~~~l~~~~~~---~~~~~~~~~~~~~i~~qi~~aL~~lH~---~~givHrDikp~NIll~~~~~ 185 (397)
T 1wak_A 113 SGVNGTHICMVFEVL-GHHLLKWIIK---SNYQGLPLPCVKKIIQQVLQGLDYLHT---KCRIIHTDIKPENILLSVNEQ 185 (397)
T ss_dssp EETTEEEEEEEECCC-CCBHHHHHHH---TTTSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECCCCSGGGEEECCCHH
T ss_pred cCCCCceEEEEEecc-CccHHHHHHh---cccCCCCHHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHeeEeccch
Confidence 456789999999 5666666643 233568999999999999999999997 6 999999999999999775
Q ss_pred ------------------------------------------------CeEEeecCCceecCCCCCceeeeecccccccC
Q 002238 737 ------------------------------------------------RAKVADFGLVRLAPEGKGSIETRIAGTFGYLA 768 (948)
Q Consensus 737 ------------------------------------------------~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~a 768 (948)
.+||+|||+++..... .....||+.|+|
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~a 261 (397)
T 1wak_A 186 YIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRS 261 (397)
T ss_dssp HHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCC
T ss_pred hhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccC
Confidence 7999999999866432 234568999999
Q ss_pred ceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhH---HHHHHHhhcCc-------ccc-ccccCcc-----
Q 002238 769 PEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHL---VTWFRRIHLSK-------DSF-HKAIDPT----- 832 (948)
Q Consensus 769 PE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~---~~~~~~~~~~~-------~~~-~~~~~~~----- 832 (948)
||++.+..++.++|||||||++|||++|+.||......+.... ...+....... ... ...+...
T Consensus 262 PE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 341 (397)
T 1wak_A 262 LEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKH 341 (397)
T ss_dssp HHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSS
T ss_pred ChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccc
Confidence 9999999999999999999999999999999986553321111 11111110000 000 0000000
Q ss_pred cC-------------CccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 833 ID-------------LNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 833 ~~-------------~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
+. ...........+.+++.+|++.||++|||++|+++
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 342 ITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred ccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 00 00112345567899999999999999999999986
No 232
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=8.3e-37 Score=334.05 Aligned_cols=254 Identities=22% Similarity=0.296 Sum_probs=199.9
Q ss_pred hhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcC--ChhhHHHHHHHHHHHHhcCCCceeeEEeEEE--eCCc
Q 002238 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI--SGKGLTEFKSEIAVLTKVRHRHLVALLGHCL--DGNE 665 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~--~~~~ 665 (948)
..++|++.+.||+|+||.||+|... +++.||||++..... .....+.+.+|++++++++||||+++++++. +...
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence 4578999999999999999999874 689999999875421 1234578999999999999999999999984 4557
Q ss_pred eEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCC
Q 002238 666 KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGL 745 (948)
Q Consensus 666 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGl 745 (948)
.++||||++++ |.+++.. .....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 83 ~~lv~e~~~~~-l~~~~~~---~~~~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~NIl~~~~~~~kl~dfg~ 155 (305)
T 2wtk_C 83 MYMVMEYCVCG-MQEMLDS---VPEKRFPVCQAHGYFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGV 155 (305)
T ss_dssp EEEEEECCSEE-HHHHHHH---STTCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred EEEEehhccCC-HHHHHHh---CcccccCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEcCCCcEEeecccc
Confidence 89999999876 7666643 233578999999999999999999997 8999999999999999999999999999
Q ss_pred ceecCCCC-CceeeeecccccccCceecccCC--CCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCc
Q 002238 746 VRLAPEGK-GSIETRIAGTFGYLAPEYAVTGR--VTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSK 822 (948)
Q Consensus 746 a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 822 (948)
+....... ........||+.|+|||++.+.. ++.++||||||+++|||++|+.||......+.... +....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~------i~~~~ 229 (305)
T 2wtk_C 156 AEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFEN------IGKGS 229 (305)
T ss_dssp CEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH------HHHCC
T ss_pred ccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHH------HhcCC
Confidence 98654322 22334456999999999987654 47899999999999999999999987553322111 11111
Q ss_pred cccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 823 DSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
.. +.. .....+.+++.+|++.||.+||++.++++.
T Consensus 230 ~~----~~~---------~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 230 YA----IPG---------DCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp CC----CCS---------SSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred CC----CCC---------ccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00 011 122458899999999999999999999875
No 233
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=3.3e-37 Score=349.03 Aligned_cols=264 Identities=20% Similarity=0.324 Sum_probs=197.3
Q ss_pred hcCCcccceecccCceEEEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCc------
Q 002238 592 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNE------ 665 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~------ 665 (948)
..+|+..+.||+|+||.||+|+..++..||+|++.... ....+|+++++.++||||+++++++.....
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~------~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~ 112 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK------RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVF 112 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCT------TSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCc------chHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceE
Confidence 45799999999999999999998777779999886532 122479999999999999999999965443
Q ss_pred eEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEc-CCCCeEEeecC
Q 002238 666 KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLG-DDMRAKVADFG 744 (948)
Q Consensus 666 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~-~~~~~kl~DfG 744 (948)
.++||||++++ +.+.+..+. .....+++..+..++.|+++||+|||+ .+|+||||||+|||++ .++.+||+|||
T Consensus 113 ~~lv~e~~~~~-l~~~~~~~~-~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~kL~DFG 187 (394)
T 4e7w_A 113 LNLVLEYVPET-VYRASRHYA-KLKQTMPMLLIKLYMYQLLRSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFG 187 (394)
T ss_dssp EEEEEECCSEE-HHHHHHHHH-HTTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred EEEEeeccCcc-HHHHHHHHH-hhcCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEcCCCCcEEEeeCC
Confidence 78999999764 444443322 223678999999999999999999997 8999999999999999 78999999999
Q ss_pred CceecCCCCCceeeeecccccccCceecccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCc-
Q 002238 745 LVRLAPEGKGSIETRIAGTFGYLAPEYAVTG-RVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSK- 822 (948)
Q Consensus 745 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~- 822 (948)
+++...... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||.+....+....+ ........
T Consensus 188 ~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i--~~~~g~p~~ 263 (394)
T 4e7w_A 188 SAKILIAGE--PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEI--IKVLGTPSR 263 (394)
T ss_dssp TCEECCTTC--CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH--HHHHCCCCH
T ss_pred CcccccCCC--CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH--HHHhCCCCH
Confidence 998764433 23345789999999998765 5899999999999999999999999886644332211 11110000
Q ss_pred -------cccccccCcccCCc----cchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 823 -------DSFHKAIDPTIDLN----EGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 823 -------~~~~~~~~~~~~~~----~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
..+....-+..... ........++.+++.+|++.||.+||++.|++++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 264 EQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp HHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 00000000000000 0001133568999999999999999999999874
No 234
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=3.4e-37 Score=335.88 Aligned_cols=255 Identities=26% Similarity=0.323 Sum_probs=205.5
Q ss_pred HhhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCC-------hhhHHHHHHHHHHHHhcC-CCceeeEEeEE
Q 002238 590 NVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS-------GKGLTEFKSEIAVLTKVR-HRHLVALLGHC 660 (948)
Q Consensus 590 ~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~-------~~~~~~~~~E~~~l~~l~-H~niv~l~~~~ 660 (948)
...++|++.+.||+|+||.||+|..+ +|+.||||++...... ....+.+.+|++++++++ ||||+++++++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 34678999999999999999999875 6899999999764311 122456889999999995 99999999999
Q ss_pred EeCCceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEE
Q 002238 661 LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKV 740 (948)
Q Consensus 661 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl 740 (948)
.+++..++||||+++++|.+++.. ...+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl 165 (298)
T 1phk_A 94 ETNTFFFLVFDLMKKGELFDYLTE-----KVTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKL 165 (298)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEE
T ss_pred ccCCeEEEEEeccCCCcHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEcCCCcEEE
Confidence 999999999999999999999854 1468999999999999999999997 89999999999999999999999
Q ss_pred eecCCceecCCCCCceeeeecccccccCceecc------cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHH
Q 002238 741 ADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAV------TGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTW 814 (948)
Q Consensus 741 ~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~ 814 (948)
+|||++....... ......||+.|+|||++. ...++.++||||||+++|||++|+.||...........
T Consensus 166 ~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~--- 240 (298)
T 1phk_A 166 TDFGFSCQLDPGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRM--- 240 (298)
T ss_dssp CCCTTCEECCTTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH---
T ss_pred ecccchhhcCCCc--ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHH---
Confidence 9999998765432 233456899999999985 45688999999999999999999999987554322111
Q ss_pred HHHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 815 FRRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
......... . .........+.+++.+|++.||.+||++.++++
T Consensus 241 ---~~~~~~~~~---~------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 241 ---IMSGNYQFG---S------PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp ---HHHTCCCCC---T------TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred ---HhcCCcccC---c------ccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 111010000 0 011123456889999999999999999999876
No 235
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.8e-37 Score=351.66 Aligned_cols=271 Identities=25% Similarity=0.352 Sum_probs=184.9
Q ss_pred hcCCcc-cceecccCceEEEEEEEc---CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEe--CCc
Q 002238 592 TNNFSE-ENILGRGGFGTVYKGELH---DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLD--GNE 665 (948)
Q Consensus 592 ~~~~~~-~~~lg~G~fg~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~ 665 (948)
.+.|++ +++||+|+||.||+|+++ +++.||||++..... ...+.+|++++++++||||+++++++.. +..
T Consensus 19 ~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 94 (405)
T 3rgf_A 19 EDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI----SMSACREIALLRELKHPNVISLQKVFLSHADRK 94 (405)
T ss_dssp HHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC----CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTE
T ss_pred hhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC----CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCe
Confidence 445665 568999999999999875 578999999875422 2568899999999999999999999964 667
Q ss_pred eEEEEEecCCCChhHHHHhhhhc----CCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEE----cCCCC
Q 002238 666 KLLVFEYMPQGTLSRHIFNWAEE----GLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL----GDDMR 737 (948)
Q Consensus 666 ~~lv~e~~~~gsL~~~l~~~~~~----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill----~~~~~ 737 (948)
.++||||++ |+|.+++...... ....+++..++.++.||+.||+|||+ .+|+||||||+|||+ +.++.
T Consensus 95 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~ 170 (405)
T 3rgf_A 95 VWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGR 170 (405)
T ss_dssp EEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECCSSTTTTC
T ss_pred EEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeCCCcCHHHeEEecCCCCCCc
Confidence 899999996 5888777542211 12358999999999999999999997 899999999999999 67789
Q ss_pred eEEeecCCceecCCCCC--ceeeeecccccccCceecccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCchh-------
Q 002238 738 AKVADFGLVRLAPEGKG--SIETRIAGTFGYLAPEYAVTG-RVTTKVDVFSFGVILMELITGRKALDESQPEE------- 807 (948)
Q Consensus 738 ~kl~DfGla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~------- 807 (948)
+||+|||+++....... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||.......
T Consensus 171 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~ 250 (405)
T 3rgf_A 171 VKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYH 250 (405)
T ss_dssp EEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCC
T ss_pred EEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccch
Confidence 99999999986543221 223446799999999999874 58999999999999999999999997654321
Q ss_pred hhhHHHHHHHhhcCccc-cccc------------cC-cccCCcc-------chHHHHHHHHHHHHHhcccCCCCCCChHH
Q 002238 808 SMHLVTWFRRIHLSKDS-FHKA------------ID-PTIDLNE-------GILASISTVAELAGHCCAREPYQRPDMGH 866 (948)
Q Consensus 808 ~~~~~~~~~~~~~~~~~-~~~~------------~~-~~~~~~~-------~~~~~~~~l~~li~~c~~~~P~~RPt~~e 866 (948)
...+...+......... +... +. ....... ........+.+|+.+|++.||.+|||++|
T Consensus 251 ~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e 330 (405)
T 3rgf_A 251 HDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQ 330 (405)
T ss_dssp HHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHH
T ss_pred HHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHH
Confidence 11111111111111000 0000 00 0000000 00001245789999999999999999999
Q ss_pred HHHH
Q 002238 867 AVNV 870 (948)
Q Consensus 867 v~~~ 870 (948)
++++
T Consensus 331 ~L~h 334 (405)
T 3rgf_A 331 AMQD 334 (405)
T ss_dssp HHTS
T ss_pred HhcC
Confidence 9874
No 236
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=3.4e-37 Score=340.68 Aligned_cols=259 Identities=23% Similarity=0.329 Sum_probs=182.4
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHH-HHHhcCCCceeeEEeEEEeCCceEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIA-VLTKVRHRHLVALLGHCLDGNEKLLV 669 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~-~l~~l~H~niv~l~~~~~~~~~~~lv 669 (948)
.++|+..+.||+|+||.||+|..+ +|+.||||++.... ......++..|+. +++.++||||+++++++.+++..++|
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv 99 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTV-DEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWIC 99 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCC-CHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeeccc-CchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEE
Confidence 367889999999999999999875 78999999997653 3334455666666 77778999999999999999999999
Q ss_pred EEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCC-CeeecCCCCccEEEcCCCCeEEeecCCcee
Q 002238 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ-SFIHRDLKPSNILLGDDMRAKVADFGLVRL 748 (948)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~ivHrDik~~Nill~~~~~~kl~DfGla~~ 748 (948)
|||+++ +|.+++..........+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||+++.
T Consensus 100 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 175 (327)
T 3aln_A 100 MELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE---NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQ 175 (327)
T ss_dssp ECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHH---HHSCCCSCCCGGGEEEETTTEEEECCCSSSCC
T ss_pred EeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhc---cCCEeECCCCHHHEEEcCCCCEEEccCCCcee
Confidence 999975 88887754333334678999999999999999999997 5 999999999999999999999999999986
Q ss_pred cCCCCCceeeeecccccccCceec----ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCccc
Q 002238 749 APEGKGSIETRIAGTFGYLAPEYA----VTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDS 824 (948)
Q Consensus 749 ~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 824 (948)
..... ......||+.|+|||++ .+..++.++||||||+++|||++|+.||........ ....
T Consensus 176 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-----~~~~------- 241 (327)
T 3aln_A 176 LVDSI--AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD-----QLTQ------- 241 (327)
T ss_dssp --------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC------------CC-------
T ss_pred ccccc--ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH-----HHHH-------
Confidence 54432 22334699999999998 456789999999999999999999999976432110 0000
Q ss_pred cccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 825 FHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
......+.+. ..........+.+++.+|++.||++||++.++++.
T Consensus 242 ~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 242 VVKGDPPQLS-NSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp CCCSCCCCCC-CCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HhcCCCCCCC-CcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 0000001111 00111233468899999999999999999999874
No 237
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=2.7e-37 Score=339.27 Aligned_cols=254 Identities=21% Similarity=0.320 Sum_probs=199.3
Q ss_pred hhcCCcccceecccCceEEEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcC--CCceeeEEeEEEeCCceEE
Q 002238 591 VTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR--HRHLVALLGHCLDGNEKLL 668 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~~~~~l 668 (948)
..++|++.+.||+|+||.||+|..++++.||||++..........+.+.+|++++++++ ||||+++++++.+++..++
T Consensus 26 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 105 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 105 (313)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEE
Confidence 45679999999999999999999888999999999876556666788999999999997 5999999999999999999
Q ss_pred EEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCcee
Q 002238 669 VFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 748 (948)
Q Consensus 669 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~ 748 (948)
||| +.+++|.+++.. ...+++..++.++.|+++||+|||+ .+|+||||||+||++++ +.+||+|||+++.
T Consensus 106 v~e-~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~ 175 (313)
T 3cek_A 106 VME-CGNIDLNSWLKK-----KKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIVD-GMLKLIDFGIANQ 175 (313)
T ss_dssp EEC-CCSEEHHHHHHH-----CSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEET-TEEEECCCSSSCC
T ss_pred EEe-cCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEEEC-CeEEEeecccccc
Confidence 999 568899999853 2478999999999999999999997 79999999999999974 8999999999986
Q ss_pred cCCCCCc-eeeeecccccccCceeccc-----------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHH
Q 002238 749 APEGKGS-IETRIAGTFGYLAPEYAVT-----------GRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFR 816 (948)
Q Consensus 749 ~~~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~ 816 (948)
....... ......||+.|+|||++.+ ..++.++||||||+++|||++|+.||........ ...
T Consensus 176 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-----~~~ 250 (313)
T 3cek_A 176 MQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS-----KLH 250 (313)
T ss_dssp --------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH-----HHH
T ss_pred ccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHH-----HHH
Confidence 5443221 2234569999999999875 4688999999999999999999999976543211 111
Q ss_pred HhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 817 RIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
....... ..... . .....+.+++.+|++.||.+||++.++++.
T Consensus 251 ~~~~~~~------~~~~~--~---~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 251 AIIDPNH------EIEFP--D---IPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp HHHCTTS------CCCCC--C---CSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHhccc------ccCCc--c---cchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 1111000 00000 0 112458899999999999999999999874
No 238
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.3e-36 Score=332.07 Aligned_cols=252 Identities=25% Similarity=0.424 Sum_probs=192.9
Q ss_pred hhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEe-------
Q 002238 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLD------- 662 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~------- 662 (948)
..++|++.+.||+|+||.||+|+.. +|+.||||++.. .....+.+.+|+.++++++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH---TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKP 80 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE---EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec---cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhh
Confidence 3567999999999999999999874 789999999865 34456789999999999999999999998865
Q ss_pred ------CCceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCC
Q 002238 663 ------GNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM 736 (948)
Q Consensus 663 ------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~ 736 (948)
....++||||+++|+|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++
T Consensus 81 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dlkp~Nil~~~~~ 153 (303)
T 1zy4_A 81 MTAVKKKSTLFIQMEYCENGTLYDLIHS----ENLNQQRDEYWRLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESR 153 (303)
T ss_dssp -----CEEEEEEEEECCCSCBHHHHHHH----SCGGGCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTS
T ss_pred hcccccCCceEEEEecCCCCCHHHhhhc----cccccchHHHHHHHHHHHHHHHHHHh---CCeecccCCHHhEEEcCCC
Confidence 3467999999999999999853 23467889999999999999999997 7999999999999999999
Q ss_pred CeEEeecCCceecCCCC-------------CceeeeecccccccCceecccC-CCCchhhHHHHHHHHHHHHhCCCCCCC
Q 002238 737 RAKVADFGLVRLAPEGK-------------GSIETRIAGTFGYLAPEYAVTG-RVTTKVDVFSFGVILMELITGRKALDE 802 (948)
Q Consensus 737 ~~kl~DfGla~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv~l~elltg~~p~~~ 802 (948)
.+||+|||+++...... ........||+.|+|||++.+. .++.++||||||+++|||++ ||..
T Consensus 154 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~ 230 (303)
T 1zy4_A 154 NVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFST 230 (303)
T ss_dssp CEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSS
T ss_pred CEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCC
Confidence 99999999998654321 1122345689999999999764 68999999999999999998 5442
Q ss_pred CCchhhhhHHHHHHHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 803 SQPEESMHLVTWFRRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
.. +.... ..........+. +.+ ....+..+.+++.+|++.||.+||++.++++
T Consensus 231 ~~--~~~~~---~~~~~~~~~~~~----~~~-----~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 231 GM--ERVNI---LKKLRSVSIEFP----PDF-----DDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HH--HHHHH---HHHHHSTTCCCC----TTC-----CTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ch--hHHHH---HHhccccccccC----ccc-----cccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 21 11111 111111111111 111 1122345889999999999999999999987
No 239
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1.2e-37 Score=347.47 Aligned_cols=267 Identities=20% Similarity=0.297 Sum_probs=206.3
Q ss_pred hcCCcccceecccCceEEEEEEEcCCcEEEEEEeecCcCChhh---------------HHHHHHHHHHHHhcCCCceeeE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKG---------------LTEFKSEIAVLTKVRHRHLVAL 656 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~---------------~~~~~~E~~~l~~l~H~niv~l 656 (948)
.++|++.+.||+|+||.||+|.. +|+.||||++......... .+.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46899999999999999999998 7999999998754322111 1789999999999999999999
Q ss_pred EeEEEeCCceEEEEEecCCCChhHHHHhh---hhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEc
Q 002238 657 LGHCLDGNEKLLVFEYMPQGTLSRHIFNW---AEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLG 733 (948)
Q Consensus 657 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~---~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~ 733 (948)
++++.+.+..++||||+++|+|.+++... .......+++..++.++.|++.||+|||+ ..+|+||||||+||+++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~--~~~i~H~dl~p~Nil~~ 186 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMD 186 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHH--TSCEECCCCCGGGEEEC
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhc--cCCEeecCCChHhEEEc
Confidence 99999999999999999999999883210 11224679999999999999999999996 37999999999999999
Q ss_pred CCCCeEEeecCCceecCCCCCceeeeecccccccCceecccC-CCCc-hhhHHHHHHHHHHHHhCCCCCCCCCchhhhhH
Q 002238 734 DDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTG-RVTT-KVDVFSFGVILMELITGRKALDESQPEESMHL 811 (948)
Q Consensus 734 ~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~ 811 (948)
.++.++|+|||+++..... ......||+.|+|||++.+. .++. ++||||||+++|||++|+.||........ .
T Consensus 187 ~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~ 261 (348)
T 2pml_X 187 KNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVE--L 261 (348)
T ss_dssp TTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHH--H
T ss_pred CCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHH--H
Confidence 9999999999999876443 33456799999999999887 6666 99999999999999999999987654211 1
Q ss_pred HHHHHHhhcCcccccccc----CcccC--CccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 812 VTWFRRIHLSKDSFHKAI----DPTID--LNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 812 ~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
.. .+......+.... .+... ...........+.+++.+|++.||.+||++.|+++
T Consensus 262 ~~---~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 262 FN---NIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp HH---HHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HH---HHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 11 1111111111000 00000 00000223456889999999999999999999987
No 240
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1e-36 Score=353.26 Aligned_cols=363 Identities=17% Similarity=0.212 Sum_probs=254.2
Q ss_pred CCCCCccc--eEEeCC---------CCEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC--CcCCCCCCcEE
Q 002238 54 TDPCKWNH--VVCIED---------KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP--SLNGLASLEVV 120 (948)
Q Consensus 54 ~~~C~w~g--v~c~~~---------~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p--~~~~l~~L~~L 120 (948)
...|.|.+ |.|... .+++.|+|++|++++..|..|.++++|++|+|++|.+.+.++ .|.++++|++|
T Consensus 5 ~~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L 84 (455)
T 3v47_A 5 TSECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIIL 84 (455)
T ss_dssp --CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEE
T ss_pred cceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEE
Confidence 34566666 778543 579999999999999889999999999999999999986543 69999999999
Q ss_pred EcccccccCCCCccccCCCCCCEEEccCCCCCCCCCCcc--ccCCCCCCEEEccCccccccCCCC-CCCCCCCCCcEEEc
Q 002238 121 MLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQS--LRNASGLQNFSANSANITGQIPSF-FGPDEFPGLTILHL 197 (948)
Q Consensus 121 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~--~~~l~~L~~L~l~~n~l~~~~p~~-~~~~~l~~L~~L~L 197 (948)
+|++|.+++++|..|+++++|++|+|++|++++ .+|.. +.++++|++|+|++|++++..|.. +. .+++|++|+|
T Consensus 85 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~--~l~~L~~L~L 161 (455)
T 3v47_A 85 KLDYNQFLQLETGAFNGLANLEVLTLTQCNLDG-AVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFL--NMRRFHVLDL 161 (455)
T ss_dssp ECTTCTTCEECTTTTTTCTTCCEEECTTSCCBT-HHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGG--GCTTCCEEEC
T ss_pred eCCCCccCccChhhccCcccCCEEeCCCCCCCc-cccCcccccCcccCCEEECCCCccCccCcccccC--CCCcccEEeC
Confidence 999999999999999999999999999999986 44544 899999999999999999998876 65 8999999999
Q ss_pred ccccccccCCCCccc---ccccceeccCCCCCCccCCCc-----cccccCCCccEEEccCCcccccCCC-CC---CCCCC
Q 002238 198 AFNQLIGGLPASFSG---SQIQSLWVNGQNGNAKLGGGI-----DVIQNMTSLKEIWLHSNAFSGPLPD-FS---GVKQL 265 (948)
Q Consensus 198 s~N~l~~~~p~~~~~---~~l~~l~~~~~~~~~~~~~~~-----~~l~~l~~L~~L~Ls~N~l~~~~~~-~~---~l~~L 265 (948)
++|++++..|..+.. .+++.|++.++.......... ..+..+++|++|+|++|++++.++. +. ...+|
T Consensus 162 ~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L 241 (455)
T 3v47_A 162 TFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKI 241 (455)
T ss_dssp TTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCE
T ss_pred CCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccce
Confidence 999999998888765 345555554443332221111 1233567888899998888764432 11 12444
Q ss_pred cEEeccCCccccc----------cchhhhC--CCCCcEEEcccCcccccCCC-CCCccccccccccCCCCCCCCCCCchh
Q 002238 266 ESLSLRDNFFTGP----------VPDSLVK--LESLKIVNMTNNLLQGPVPE-FDRSVSLDMAKGSNNFCLPSPGACDPR 332 (948)
Q Consensus 266 ~~L~L~~N~l~~~----------~p~~l~~--l~~L~~L~Ls~N~l~g~~p~-~~~~~~l~~~~~~~~~~~~~~~~~~~~ 332 (948)
+.|++++|.+.+. .+..+.. .++|+.|+|++|++++.+|. +..+.+|..++..+|.+...+.
T Consensus 242 ~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~----- 316 (455)
T 3v47_A 242 QSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDD----- 316 (455)
T ss_dssp EEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECT-----
T ss_pred eeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccCh-----
Confidence 4444444432211 1111111 13445555555555444443 3334444444444433222110
Q ss_pred hhhhHHHHHhhCCcchhccccCCCCCCCCccceeecCCceEEEEccCCcccccCCccccCccccceEeCccccccccCCc
Q 002238 333 LNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPE 412 (948)
Q Consensus 333 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~ 412 (948)
..+..+++|+.|+|++|.+.+..|..|+++++|++|+|++|++++..|.
T Consensus 317 -------------------------------~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 365 (455)
T 3v47_A 317 -------------------------------NAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQ 365 (455)
T ss_dssp -------------------------------TTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTT
T ss_pred -------------------------------hHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChh
Confidence 0122345778888888888877788888888888888888888877788
Q ss_pred CCcCCCCCcEEEccCCcccCCCCC----CCcccccccCCCCCCCCcc
Q 002238 413 GLSVLGALKELDVSNNQLYGKIPS----FKSNAIVNTDGNPDIGKEK 455 (948)
Q Consensus 413 ~l~~l~~L~~L~ls~N~l~g~ip~----~~~~~~~~~~gnp~~~~~~ 455 (948)
.|..+++|++|+|++|+|++.++. +.....+.+++||+.|.++
T Consensus 366 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 366 SFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp TTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred hccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 888888888888888888775553 3456677788888877665
No 241
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=7.6e-37 Score=336.70 Aligned_cols=266 Identities=21% Similarity=0.372 Sum_probs=196.3
Q ss_pred hhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEE--------
Q 002238 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCL-------- 661 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~-------- 661 (948)
..++|++.+.||+|+||.||+|... +|+.||||++... .....+.+.+|++++++++||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 86 (320)
T 2i6l_A 9 LGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT--DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTD 86 (320)
T ss_dssp ETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC--SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC
T ss_pred cCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC--ChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccc
Confidence 3578999999999999999999876 5899999998754 4556678999999999999999999999874
Q ss_pred ------eCCceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEc-C
Q 002238 662 ------DGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLG-D 734 (948)
Q Consensus 662 ------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~-~ 734 (948)
+....++||||++ |+|.+++.. ..+++..++.++.|++.||+|||+ .+|+||||||+||+++ +
T Consensus 87 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~ 156 (320)
T 2i6l_A 87 DVGSLTELNSVYIVQEYME-TDLANVLEQ------GPLLEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANLFINTE 156 (320)
T ss_dssp ----CCSCSEEEEEEECCS-EEHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETT
T ss_pred ccccccccCceeEEeeccC-CCHHHHhhc------CCccHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCC
Confidence 3467799999997 699888732 568999999999999999999997 8999999999999997 5
Q ss_pred CCCeEEeecCCceecCCCCC--ceeeeecccccccCceeccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhH
Q 002238 735 DMRAKVADFGLVRLAPEGKG--SIETRIAGTFGYLAPEYAVT-GRVTTKVDVFSFGVILMELITGRKALDESQPEESMHL 811 (948)
Q Consensus 735 ~~~~kl~DfGla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~ 811 (948)
++.+||+|||+++....... .......||..|+|||++.+ ..++.++||||||+++|||++|+.||......+....
T Consensus 157 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~ 236 (320)
T 2i6l_A 157 DLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQL 236 (320)
T ss_dssp TTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred CCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 67999999999986543211 12233467999999998865 6789999999999999999999999987664332221
Q ss_pred HHHHHHhhcCcc-c-----------ccc-ccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 812 VTWFRRIHLSKD-S-----------FHK-AIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 812 ~~~~~~~~~~~~-~-----------~~~-~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
+. ........ . ... ...+.............++.+++.+|++.||++||+++++++.
T Consensus 237 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 237 IL--ESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp HH--HHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HH--HhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 11 10000000 0 000 0000000011111234568999999999999999999999873
No 242
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=1.7e-36 Score=338.73 Aligned_cols=262 Identities=22% Similarity=0.359 Sum_probs=200.4
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCc-----
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNE----- 665 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~----- 665 (948)
.++|...+.||+|+||.||+|..+ +|+.||||++..........+.+.+|+.+++.++||||+++++++.....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 468999999999999999999875 68999999997654455556789999999999999999999999987654
Q ss_pred -eEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecC
Q 002238 666 -KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 744 (948)
Q Consensus 666 -~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfG 744 (948)
.++||||++ ++|.+++. ..+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 103 ~~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg 171 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMG-------LKFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFG 171 (353)
T ss_dssp CCEEEEECCS-EEGGGTTT-------SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTCCEEECSTT
T ss_pred eEEEEecccc-CCHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEeECCCCcEEEeecc
Confidence 499999997 68877662 358999999999999999999997 899999999999999999999999999
Q ss_pred CceecCCCCCceeeeecccccccCceeccc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCcc
Q 002238 745 LVRLAPEGKGSIETRIAGTFGYLAPEYAVT-GRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKD 823 (948)
Q Consensus 745 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 823 (948)
+++..... .....||+.|+|||++.+ ..++.++||||||+++|||++|+.||......+....+. ........
T Consensus 172 ~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~--~~~~~~~~ 245 (353)
T 3coi_A 172 LARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQIL--KVTGVPGT 245 (353)
T ss_dssp CTTC------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHH--HHHCBCCH
T ss_pred cccCCCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH--HHhCCCCH
Confidence 98754332 234578999999999877 678999999999999999999999998765433222111 10000000
Q ss_pred cccc------------ccC--cccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 824 SFHK------------AID--PTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 824 ~~~~------------~~~--~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
.+.. .+. +.............++.+++.+|++.||++||+++++++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 246 EFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp HHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0000 000 0000011112234568999999999999999999999863
No 243
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=3.5e-36 Score=339.76 Aligned_cols=205 Identities=25% Similarity=0.342 Sum_probs=175.3
Q ss_pred hhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcC-CC-----ceeeEEeEEEeC
Q 002238 591 VTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR-HR-----HLVALLGHCLDG 663 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-H~-----niv~l~~~~~~~ 663 (948)
+.++|++.+.||+|+||.||+|... +++.||||+++. ......++..|+.+++.++ |+ +|+++++++...
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 128 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKN---KKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR 128 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECS---SHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEec---cHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC
Confidence 4678999999999999999999875 688999999874 3344567888999999885 55 499999999999
Q ss_pred CceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEc--CCCCeEEe
Q 002238 664 NEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLG--DDMRAKVA 741 (948)
Q Consensus 664 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~--~~~~~kl~ 741 (948)
+..++||||++ |+|.+++.. .....+++..+..++.|++.||+|||+. +.+|+||||||+|||++ .++.+||+
T Consensus 129 ~~~~lv~e~~~-~~L~~~l~~---~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~ 203 (382)
T 2vx3_A 129 NHLCLVFEMLS-YNLYDLLRN---TNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIV 203 (382)
T ss_dssp TEEEEEEECCC-CBHHHHHHH---TTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEEC
T ss_pred CceEEEEecCC-CCHHHHHhh---cCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEE
Confidence 99999999996 599998854 2235689999999999999999999952 36899999999999995 47789999
Q ss_pred ecCCceecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchh
Q 002238 742 DFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEE 807 (948)
Q Consensus 742 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~ 807 (948)
|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+
T Consensus 204 DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~ 265 (382)
T 2vx3_A 204 DFGSSCQLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVD 265 (382)
T ss_dssp CCTTCEETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred eccCceecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 99999876432 234578999999999999999999999999999999999999998766544
No 244
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=2.2e-36 Score=338.24 Aligned_cols=264 Identities=23% Similarity=0.316 Sum_probs=202.8
Q ss_pred hhcCCcccceecccCceEEEEEEEc-CC-cEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCc------eeeEEeEEEe
Q 002238 591 VTNNFSEENILGRGGFGTVYKGELH-DG-TKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRH------LVALLGHCLD 662 (948)
Q Consensus 591 ~~~~~~~~~~lg~G~fg~Vy~~~~~-~g-~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~n------iv~l~~~~~~ 662 (948)
..++|++.+.||+|+||.||+|... ++ +.||||+++. .....+.+.+|++++++++|++ ++.+++++..
T Consensus 17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 93 (355)
T 2eu9_A 17 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRN---VGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF 93 (355)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE
T ss_pred ecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcc---cccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee
Confidence 3578999999999999999999874 34 6899999864 3345577889999999997766 8999999999
Q ss_pred CCceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEE----------
Q 002238 663 GNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL---------- 732 (948)
Q Consensus 663 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill---------- 732 (948)
.+..++||||+ ++++.+.+.. .....+++.+++.++.||+.||+|||+ .+|+||||||+|||+
T Consensus 94 ~~~~~lv~e~~-~~~l~~~l~~---~~~~~~~~~~~~~i~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~ 166 (355)
T 2eu9_A 94 HGHMCIAFELL-GKNTFEFLKE---NNFQPYPLPHVRHMAYQLCHALRFLHE---NQLTHTDLKPENILFVNSEFETLYN 166 (355)
T ss_dssp TTEEEEEEECC-CCBHHHHHHH---TTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEESCCCEEEEEC
T ss_pred CCeEEEEEecc-CCChHHHHHh---ccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeccccccccc
Confidence 99999999999 6677776643 233578999999999999999999997 899999999999999
Q ss_pred ---------cCCCCeEEeecCCceecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 002238 733 ---------GDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDES 803 (948)
Q Consensus 733 ---------~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~ 803 (948)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 167 ~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 242 (355)
T 2eu9_A 167 EHKSCEEKSVKNTSIRVADFGSATFDHEH----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTH 242 (355)
T ss_dssp CC-CCCEEEESCCCEEECCCTTCEETTSC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccCCCcEEEeecCcccccccc----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCC
Confidence 56789999999999865432 23457999999999999999999999999999999999999999876
Q ss_pred CchhhhhHHHHHHHhhcCccccc--------------------------cccCcccCCccchHHHHHHHHHHHHHhcccC
Q 002238 804 QPEESMHLVTWFRRIHLSKDSFH--------------------------KAIDPTIDLNEGILASISTVAELAGHCCARE 857 (948)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~ 857 (948)
...+....+...... ....... +...+..............+.+++.+|++.|
T Consensus 243 ~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d 321 (355)
T 2eu9_A 243 ENREHLVMMEKILGP-IPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFD 321 (355)
T ss_dssp SHHHHHHHHHHHHCC-CCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSS
T ss_pred CHHHHHHHHHHHcCC-CcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCC
Confidence 654332222111100 0000000 0000000000111223457889999999999
Q ss_pred CCCCCChHHHHH
Q 002238 858 PYQRPDMGHAVN 869 (948)
Q Consensus 858 P~~RPt~~ev~~ 869 (948)
|++|||+.|+++
T Consensus 322 P~~Rpt~~e~l~ 333 (355)
T 2eu9_A 322 PAQRITLAEALL 333 (355)
T ss_dssp TTTSCCHHHHTT
T ss_pred hhhCcCHHHHhc
Confidence 999999999875
No 245
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.6e-36 Score=336.10 Aligned_cols=254 Identities=23% Similarity=0.306 Sum_probs=173.4
Q ss_pred hhcCCccc-ceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEe----CC
Q 002238 591 VTNNFSEE-NILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLD----GN 664 (948)
Q Consensus 591 ~~~~~~~~-~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~ 664 (948)
+.++|.+. ++||+|+||.||+|..+ +|+.||||++... . ....+....++.++||||+++++++.. +.
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~---~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 99 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS---P---KARQEVDHHWQASGGPHIVCILDVYENMHHGKR 99 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS---H---HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc---H---HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCc
Confidence 46788885 46999999999999876 7899999998653 1 122223334667799999999999876 44
Q ss_pred ceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcC---CCCeEEe
Q 002238 665 EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD---DMRAKVA 741 (948)
Q Consensus 665 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~---~~~~kl~ 741 (948)
..++||||+++|+|.+++.. .....+++.+++.++.|++.||+|||+ .+|+||||||+||+++. ++.+||+
T Consensus 100 ~~~lv~e~~~gg~L~~~l~~---~~~~~l~~~~~~~i~~ql~~~l~~LH~---~~ivH~dlkp~NIll~~~~~~~~~kl~ 173 (336)
T 3fhr_A 100 CLLIIMECMEGGELFSRIQE---RGDQAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLT 173 (336)
T ss_dssp EEEEEEECCTTEEHHHHHHT---C-CCCCBHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEEC
T ss_pred eEEEEEeccCCCCHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEEecCCCceEEEe
Confidence 57999999999999999854 223579999999999999999999997 79999999999999986 4559999
Q ss_pred ecCCceecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcC
Q 002238 742 DFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLS 821 (948)
Q Consensus 742 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 821 (948)
|||+++...... .....||+.|+|||++.+..++.++||||||+++|||++|+.||............ .......
T Consensus 174 Dfg~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~--~~~~~~~ 248 (336)
T 3fhr_A 174 DFGFAKETTQNA---LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGM--KRRIRLG 248 (336)
T ss_dssp CCTTCEEC-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------
T ss_pred ccccceeccccc---cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhH--HHhhhcc
Confidence 999998654322 23456899999999998889999999999999999999999999765433211000 0000000
Q ss_pred ccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 822 KDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
...+ . ..........+.+++.+|++.||.+||++.|+++.
T Consensus 249 ~~~~--------~-~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 249 QYGF--------P-NPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp --CC--------C-TTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred cccc--------C-chhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0000 0 00111233468899999999999999999999984
No 246
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=8.7e-37 Score=344.09 Aligned_cols=264 Identities=22% Similarity=0.317 Sum_probs=197.7
Q ss_pred hcCCcccceecccCceEEEEEEE-cCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcC-----------CCceeeEEeE
Q 002238 592 TNNFSEENILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR-----------HRHLVALLGH 659 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-----------H~niv~l~~~ 659 (948)
.++|++.+.||+|+||.||+|+. .+++.||||++.. .......+.+|++++++++ ||||++++++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~ 94 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRG---DKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDH 94 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecC---CccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHH
Confidence 36799999999999999999986 4789999999874 3344577889999999886 8999999999
Q ss_pred EEeCC----ceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCC-CeeecCCCCccEEEc-
Q 002238 660 CLDGN----EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQ-SFIHRDLKPSNILLG- 733 (948)
Q Consensus 660 ~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~ivHrDik~~Nill~- 733 (948)
+...+ ..++||||+ +++|.+++... ....+++..++.++.||+.||+|||+ . +|+||||||+|||++
T Consensus 95 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~~i~~qi~~aL~~lH~---~~~ivH~Dikp~NIll~~ 167 (373)
T 1q8y_A 95 FNHKGPNGVHVVMVFEVL-GENLLALIKKY---EHRGIPLIYVKQISKQLLLGLDYMHR---RCGIIHTDIKPENVLMEI 167 (373)
T ss_dssp EEEEETTEEEEEEEECCC-CEEHHHHHHHT---TTSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECSCCSGGGEEEEE
T ss_pred hhccCCCCceEEEEEecC-CCCHHHHHHHh---hccCCcHHHHHHHHHHHHHHHHHHHh---cCCEEecCCChHHeEEec
Confidence 88654 679999999 89999988542 23468999999999999999999997 6 999999999999995
Q ss_pred -----CCCCeEEeecCCceecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhh
Q 002238 734 -----DDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEES 808 (948)
Q Consensus 734 -----~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~ 808 (948)
..+.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 168 ~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~ 243 (373)
T 1q8y_A 168 VDSPENLIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSY 243 (373)
T ss_dssp EETTTTEEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC--------
T ss_pred cCCCcCcceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCccccc
Confidence 3447999999999866432 2335689999999999999999999999999999999999999986542211
Q ss_pred h----hHHHHHHHhhcC----------------ccccccccCc-cc--------CCccchHHHHHHHHHHHHHhcccCCC
Q 002238 809 M----HLVTWFRRIHLS----------------KDSFHKAIDP-TI--------DLNEGILASISTVAELAGHCCAREPY 859 (948)
Q Consensus 809 ~----~~~~~~~~~~~~----------------~~~~~~~~~~-~~--------~~~~~~~~~~~~l~~li~~c~~~~P~ 859 (948)
. ............ .......+.. .. ...........++.+++.+|++.||+
T Consensus 244 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 323 (373)
T 1q8y_A 244 TKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPR 323 (373)
T ss_dssp -CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTT
T ss_pred CChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCcc
Confidence 1 111111100000 0000000000 00 00011234566789999999999999
Q ss_pred CCCChHHHHH
Q 002238 860 QRPDMGHAVN 869 (948)
Q Consensus 860 ~RPt~~ev~~ 869 (948)
+||+++|+++
T Consensus 324 ~Rpt~~ell~ 333 (373)
T 1q8y_A 324 KRADAGGLVN 333 (373)
T ss_dssp TCBCHHHHHT
T ss_pred ccCCHHHHhh
Confidence 9999999977
No 247
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=8.8e-37 Score=335.98 Aligned_cols=255 Identities=23% Similarity=0.353 Sum_probs=182.6
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLVF 670 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 670 (948)
.++|+..+.||+|+||.||+|..+ +|+.||||++..........+.+.++..+++.++||||+++++++.+++..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 467889999999999999999875 7899999999865433333444555666788889999999999999999999999
Q ss_pred EecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceecC
Q 002238 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 750 (948)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~~ 750 (948)
||+ ++.+..+... ....+++..++.++.|++.||+|||+ +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 104 e~~-~~~~~~l~~~----~~~~~~~~~~~~~~~~i~~~l~~lH~--~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 176 (318)
T 2dyl_A 104 ELM-GTCAEKLKKR----MQGPIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLV 176 (318)
T ss_dssp CCC-SEEHHHHHHH----HTSCCCHHHHHHHHHHHHHHHHHHHH--HHCCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred ecc-CCcHHHHHHH----hccCCCHHHHHHHHHHHHHHHHHHHh--hCCEEeCCCCHHHEEECCCCCEEEEECCCchhcc
Confidence 999 5555544422 13578999999999999999999997 1389999999999999999999999999997654
Q ss_pred CCCCceeeeecccccccCceecc-----cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCcccc
Q 002238 751 EGKGSIETRIAGTFGYLAPEYAV-----TGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSF 825 (948)
Q Consensus 751 ~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 825 (948)
... ......||+.|+|||++. ...++.++||||||+++|||++|+.||........ ... ......
T Consensus 177 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~---~~~~~~--- 246 (318)
T 2dyl_A 177 DDK--AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFE--VLT---KVLQEE--- 246 (318)
T ss_dssp ------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHH--HHH---HHHHSC---
T ss_pred CCc--cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHH--HHH---HHhccC---
Confidence 432 233456999999999984 55788999999999999999999999986443211 111 111100
Q ss_pred ccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 826 HKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
.+.+.. .......+.+++.+|++.||.+||++.++++.
T Consensus 247 ----~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 247 ----PPLLPG---HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp ----CCCCCS---SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ----CCCCCc---cCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 001110 01123458899999999999999999999874
No 248
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1.5e-36 Score=348.04 Aligned_cols=255 Identities=26% Similarity=0.352 Sum_probs=188.5
Q ss_pred hcCCcccceecccCceEEEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCceEEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKLLVF 670 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 670 (948)
.+.|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +||||+++++++.+++..++||
T Consensus 14 ~~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~-----~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~ 88 (434)
T 2rio_A 14 KNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID-----FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIAL 88 (434)
T ss_dssp SSCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG-----GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred hheeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH-----HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEE
Confidence 3456667899999999998776677999999998653 235678999999987 8999999999999999999999
Q ss_pred EecCCCChhHHHHhhhhcCC--CCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCC-------------
Q 002238 671 EYMPQGTLSRHIFNWAEEGL--KPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD------------- 735 (948)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~--~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~------------- 735 (948)
||++ |+|.+++........ ...++..++.++.||+.||+|||+ .+|+||||||+|||++.+
T Consensus 89 E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~ 164 (434)
T 2rio_A 89 ELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAEN 164 (434)
T ss_dssp CCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEECCHHHHSCCTTCCCS
T ss_pred ecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCcccccccccCCCc
Confidence 9995 699999854221110 112334567899999999999997 899999999999999754
Q ss_pred CCeEEeecCCceecCCCCCc---eeeeecccccccCceeccc-------CCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q 002238 736 MRAKVADFGLVRLAPEGKGS---IETRIAGTFGYLAPEYAVT-------GRVTTKVDVFSFGVILMELIT-GRKALDESQ 804 (948)
Q Consensus 736 ~~~kl~DfGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~ 804 (948)
+.+||+|||+++........ ......||+.|+|||++.+ ..++.++|||||||++|||++ |+.||....
T Consensus 165 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~ 244 (434)
T 2rio_A 165 LRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY 244 (434)
T ss_dssp CEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTT
T ss_pred eEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCch
Confidence 47999999999976554322 1234579999999999975 678999999999999999999 999997654
Q ss_pred chhhhhHHHHHHHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 805 PEESMHLVTWFRRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
..+. ..... ...... .. .........++.+++.+|++.||.+||++.++++
T Consensus 245 ~~~~----~i~~~----~~~~~~-----~~-~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 245 SRES----NIIRG----IFSLDE-----MK-CLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp THHH----HHHHT----CCCCCC-----CT-TCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhHH----HHhcC----CCCccc-----cc-ccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 3221 11111 101100 00 1112344567899999999999999999999986
No 249
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=6.4e-37 Score=337.08 Aligned_cols=248 Identities=25% Similarity=0.362 Sum_probs=200.4
Q ss_pred HHHHHhhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCCh----hhHHHHHHHHHHHHhcC--CCceeeEEe
Q 002238 586 QVLRNVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISG----KGLTEFKSEIAVLTKVR--HRHLVALLG 658 (948)
Q Consensus 586 ~~l~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~--H~niv~l~~ 658 (948)
.+.....++|++.+.||+|+||.||+|... +++.||||++....... .....+.+|+.++++++ ||||+++++
T Consensus 36 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~ 115 (320)
T 3a99_A 36 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD 115 (320)
T ss_dssp ----CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEE
T ss_pred cccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEE
Confidence 344556788999999999999999999864 78999999997653322 12345778999999996 599999999
Q ss_pred EEEeCCceEEEEEecCC-CChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEc-CCC
Q 002238 659 HCLDGNEKLLVFEYMPQ-GTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLG-DDM 736 (948)
Q Consensus 659 ~~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~-~~~ 736 (948)
++.+++..++||||+.+ ++|.+++.. ...+++..++.++.|++.||+|||+ .+|+||||||+||+++ +++
T Consensus 116 ~~~~~~~~~lv~e~~~~~~~L~~~l~~-----~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~ 187 (320)
T 3a99_A 116 WFERPDSFVLILERPEPVQDLFDFITE-----RGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRG 187 (320)
T ss_dssp EEECSSEEEEEEECCSSEEEHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTT
T ss_pred EEecCCcEEEEEEcCCCCccHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCcEeCCCCHHHEEEeCCCC
Confidence 99999999999999976 899998854 2468999999999999999999997 8999999999999999 788
Q ss_pred CeEEeecCCceecCCCCCceeeeecccccccCceecccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHH
Q 002238 737 RAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRV-TTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWF 815 (948)
Q Consensus 737 ~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~ 815 (948)
.+||+|||+++...... .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||..... ..
T Consensus 188 ~~kL~Dfg~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~--------~~ 256 (320)
T 3a99_A 188 ELKLIDFGSGALLKDTV---YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE--------II 256 (320)
T ss_dssp EEEECCCTTCEECCSSC---BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--------HH
T ss_pred CEEEeeCcccccccccc---ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh--------hh
Confidence 99999999998765432 334569999999999987766 6889999999999999999999965211 00
Q ss_pred HHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 816 RRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
. ... ..... ...++.+++.+|++.||++||+++++++
T Consensus 257 ~----~~~----~~~~~---------~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 257 R----GQV----FFRQR---------VSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp H----CCC----CCSSC---------CCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred c----ccc----ccccc---------CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 000 01111 1245889999999999999999999976
No 250
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.1e-35 Score=357.59 Aligned_cols=373 Identities=20% Similarity=0.182 Sum_probs=278.6
Q ss_pred CCEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEc
Q 002238 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEI 146 (948)
Q Consensus 68 ~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 146 (948)
.+++.|+|++|++++..+..|.++++|++|+|++|.|++..| .|.++++|++|+|++|.+++++|..|+++++|++|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 578899999999988888889999999999999999988777 6888999999999999999988888999999999999
Q ss_pred cCCCCCCCCCCccccCCCCCCEEEccCccccc-cCCCCCCCCCCCCCcEEEcccccccccCCCCccc-------------
Q 002238 147 DNNPFSSWEIPQSLRNASGLQNFSANSANITG-QIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSG------------- 212 (948)
Q Consensus 147 s~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~-~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~------------- 212 (948)
++|+++. ..+..+.++++|++|++++|.+++ .+|..|+ .+++|++|+|++|++++..|..+..
T Consensus 112 ~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~--~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l 188 (606)
T 3vq2_A 112 VETKLAS-LESFPIGQLITLKKLNVAHNFIHSCKLPAYFS--NLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDM 188 (606)
T ss_dssp TTSCCCC-SSSSCCTTCTTCCEEECCSSCCCCCCCCGGGG--TCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEEC
T ss_pred cCCcccc-ccccccCCCCCCCEEeCCCCcccceechHhHh--hcCCCCEEEccCCcceecChhhhhhhhccccccceeec
Confidence 9998885 334678888888888888888876 5688777 7888888888888888766654432
Q ss_pred ---------------ccccceeccCCCCC---------------------------------------------------
Q 002238 213 ---------------SQIQSLWVNGQNGN--------------------------------------------------- 226 (948)
Q Consensus 213 ---------------~~l~~l~~~~~~~~--------------------------------------------------- 226 (948)
.+++.|++.++...
T Consensus 189 ~~n~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l 268 (606)
T 3vq2_A 189 SLNPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRL 268 (606)
T ss_dssp TTCCCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEE
T ss_pred cCCCcceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheec
Confidence 12333333222110
Q ss_pred -------------------------------------------------Cc--c-----------------CCCcccccc
Q 002238 227 -------------------------------------------------AK--L-----------------GGGIDVIQN 238 (948)
Q Consensus 227 -------------------------------------------------~~--~-----------------~~~~~~l~~ 238 (948)
.. . ......+..
T Consensus 269 ~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l~~lp~~~l~~L~~L~l~~n~~~~~~~~~~ 348 (606)
T 3vq2_A 269 TYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLTLTMNKGSISFKKVA 348 (606)
T ss_dssp CCCTTCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCCSSCCCCCCSSCCEEEEESCSSCEECCCCC
T ss_pred cccccccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccCcccccCCCCccceeeccCCcCccchhhcc
Confidence 00 0 000112345
Q ss_pred CCCccEEEccCCcccccC--C-CCCCCCCCcEEeccCCccccccchhhhCCCCCcEEEcccCcccccCC--CCCCccccc
Q 002238 239 MTSLKEIWLHSNAFSGPL--P-DFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVP--EFDRSVSLD 313 (948)
Q Consensus 239 l~~L~~L~Ls~N~l~~~~--~-~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p--~~~~~~~l~ 313 (948)
+++|++|+|++|++++.. + .+..+++|+.|+|++|.++ .+|..+..+++|+.|++++|++.+.+| .+..+.+|.
T Consensus 349 l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~ 427 (606)
T 3vq2_A 349 LPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI-IMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLL 427 (606)
T ss_dssp CTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEE-EECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCC
T ss_pred CCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccc-cchhhccCCCCCCeeECCCCccCCccChhhhhccccCC
Confidence 678888888888888752 3 5778899999999999988 477888999999999999999988776 477788888
Q ss_pred cccccCCCCCCCCCCCchhhhhhHHHHHhhCCcchhccccCCCCCCC-CccceeecCCceEEEEccCCcccccCCccccC
Q 002238 314 MAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCS-DWIGVTCTKGNITVINFQKMNLTGTISPEFAS 392 (948)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~L~~L~ls~n~l~g~ip~~~~~ 392 (948)
.++..+|............+..+..+ +..++.... .....+..+++|+.|+|++|++++.+|..|++
T Consensus 428 ~L~l~~n~l~~~~~~~~~~l~~L~~L------------~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 495 (606)
T 3vq2_A 428 YLDISYTNTKIDFDGIFLGLTSLNTL------------KMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDT 495 (606)
T ss_dssp EEECTTSCCEECCTTTTTTCTTCCEE------------ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTT
T ss_pred EEECcCCCCCccchhhhcCCCCCCEE------------ECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcc
Confidence 88888776554433322222221111 111111000 01123456789999999999999999999999
Q ss_pred ccccceEeCccccccccCCcCCcCCCCCcEEEccCCcccCCCCC---CC-cccccccCCCCCCCCccC
Q 002238 393 FKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPS---FK-SNAIVNTDGNPDIGKEKS 456 (948)
Q Consensus 393 l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~ip~---~~-~~~~~~~~gnp~~~~~~~ 456 (948)
+++|++|+|++|++++.+|..+..+++|++|||++|+|+..++. +. ....+.+++||+.|.++.
T Consensus 496 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 496 LHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp CTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred cccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCcccCCcc
Confidence 99999999999999999999999999999999999999854333 22 366788999999987764
No 251
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.9e-35 Score=351.31 Aligned_cols=375 Identities=20% Similarity=0.211 Sum_probs=260.7
Q ss_pred CCCccceEEeCC------------CCEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEc
Q 002238 56 PCKWNHVVCIED------------KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVML 122 (948)
Q Consensus 56 ~C~w~gv~c~~~------------~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L 122 (948)
.|.|.|+ |+.. .+++.|+|++|++++..|..|.++++|++|+|++|+|++.+| .|.++++|++|+|
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 4899998 8532 479999999999998889999999999999999999999887 7999999999999
Q ss_pred ccccccCCCCccccCCCCCCEEEccCCCCCCCCCCccccCCCCCCEEEccCccccccCC-CCCCCCCCCCCcEEEccccc
Q 002238 123 SNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIP-SFFGPDEFPGLTILHLAFNQ 201 (948)
Q Consensus 123 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p-~~~~~~~l~~L~~L~Ls~N~ 201 (948)
++|+++++++..|+++++|++|+|++|+++...+|..+.++++|++|++++|++.+.+| ..|. .+++|++|+|++|+
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~--~l~~L~~L~L~~n~ 159 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFA--GLTSLNELEIKALS 159 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTT--TCCEEEEEEEEETT
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhh--cccccCeeeccCCc
Confidence 99999999999999999999999999999975678899999999999999999555555 5676 89999999999999
Q ss_pred ccccCCCCccc-c------------------------cccceeccCCCCCCccCCCc-----------------------
Q 002238 202 LIGGLPASFSG-S------------------------QIQSLWVNGQNGNAKLGGGI----------------------- 233 (948)
Q Consensus 202 l~~~~p~~~~~-~------------------------~l~~l~~~~~~~~~~~~~~~----------------------- 233 (948)
+++.+|..+.. . +++.|++.++..........
T Consensus 160 l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 239 (549)
T 2z81_A 160 LRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDES 239 (549)
T ss_dssp CCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHH
T ss_pred ccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhH
Confidence 99888877653 2 23333333222111000000
Q ss_pred -----cc-----------------------------------------------------------cccCCCccEEEccC
Q 002238 234 -----DV-----------------------------------------------------------IQNMTSLKEIWLHS 249 (948)
Q Consensus 234 -----~~-----------------------------------------------------------l~~l~~L~~L~Ls~ 249 (948)
.. +..+++|+.|++++
T Consensus 240 ~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~ 319 (549)
T 2z81_A 240 FNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVEN 319 (549)
T ss_dssp HHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEES
T ss_pred HHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEecc
Confidence 00 00012233333333
Q ss_pred CcccccCCCC-CCCCCCcEEeccCCccccccch---hhhCCCCCcEEEcccCcccccCC---CCCCccccccccccCCCC
Q 002238 250 NAFSGPLPDF-SGVKQLESLSLRDNFFTGPVPD---SLVKLESLKIVNMTNNLLQGPVP---EFDRSVSLDMAKGSNNFC 322 (948)
Q Consensus 250 N~l~~~~~~~-~~l~~L~~L~L~~N~l~~~~p~---~l~~l~~L~~L~Ls~N~l~g~~p---~~~~~~~l~~~~~~~~~~ 322 (948)
|+++..+..+ ..+++|+.|+|++|++++.+|. .++.+++|+.|+|++|++++..+ .+..+.+|..++..+|..
T Consensus 320 n~l~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l 399 (549)
T 2z81_A 320 SKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTF 399 (549)
T ss_dssp SCCCCCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCC
T ss_pred CccccCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCC
Confidence 3333211122 2466677777777777665543 25666677777777777665432 144555666666666655
Q ss_pred CCCCCCCchhhhhhHHHHHhhCCcchhccccCCCCCCCCccceeecCCceEEEEccCCcccccCCccccCccccceEeCc
Q 002238 323 LPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILA 402 (948)
Q Consensus 323 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~g~ip~~~~~l~~L~~L~Ls 402 (948)
..+|.... ....+. ..+..++.-. ...+ +..++|+.|+|++|++++.+ +++++|++|+|+
T Consensus 400 ~~lp~~~~-~~~~L~------------~L~Ls~N~l~-~l~~--~~~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls 459 (549)
T 2z81_A 400 HPMPDSCQ-WPEKMR------------FLNLSSTGIR-VVKT--CIPQTLEVLDVSNNNLDSFS----LFLPRLQELYIS 459 (549)
T ss_dssp CCCCSCCC-CCTTCC------------EEECTTSCCS-CCCT--TSCTTCSEEECCSSCCSCCC----CCCTTCCEEECC
T ss_pred ccCChhhc-cccccc------------EEECCCCCcc-cccc--hhcCCceEEECCCCChhhhc----ccCChhcEEECC
Confidence 54443211 000000 0011111100 0000 01247999999999998753 578999999999
Q ss_pred cccccccCCcCCcCCCCCcEEEccCCcccCCCCC----CCcccccccCCCCCCCCcc
Q 002238 403 DNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPS----FKSNAIVNTDGNPDIGKEK 455 (948)
Q Consensus 403 ~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~ip~----~~~~~~~~~~gnp~~~~~~ 455 (948)
+|+|+ .+|. ...+++|++|||++|+|++.+|. +.....+.+++||+.|.++
T Consensus 460 ~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 460 RNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp SSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred CCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 99998 7886 57899999999999999998885 3456788999999998775
No 252
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.3e-36 Score=331.73 Aligned_cols=246 Identities=25% Similarity=0.383 Sum_probs=190.9
Q ss_pred HHHhhcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCCh----hhHHHHHHHHHHHHhc----CCCceeeEEe
Q 002238 588 LRNVTNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISG----KGLTEFKSEIAVLTKV----RHRHLVALLG 658 (948)
Q Consensus 588 l~~~~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l----~H~niv~l~~ 658 (948)
.....++|++.+.||+|+||.||+|+.. +++.||||++....... .....+.+|+.++.++ +||||+++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 3456788999999999999999999864 78999999997643221 1233466899999999 8999999999
Q ss_pred EEEeCCceEEEEEe-cCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEc-CCC
Q 002238 659 HCLDGNEKLLVFEY-MPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLG-DDM 736 (948)
Q Consensus 659 ~~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~-~~~ 736 (948)
++.+.+..++|||| +.+++|.+++.. ...+++..++.++.|++.||+|||+ .+|+||||||+||+++ .++
T Consensus 106 ~~~~~~~~~~v~e~~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~ 177 (312)
T 2iwi_A 106 WFETQEGFMLVLERPLPAQDLFDYITE-----KGPLGEGPSRCFFGQVVAAIQHCHS---RGVVHRDIKDENILIDLRRG 177 (312)
T ss_dssp EC-----CEEEEECCSSEEEHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHH---HTEECCCCSGGGEEEETTTT
T ss_pred EEecCCeEEEEEEecCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChhhEEEeCCCC
Confidence 99999999999999 789999999854 1468999999999999999999997 7999999999999999 889
Q ss_pred CeEEeecCCceecCCCCCceeeeecccccccCceecccCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHH
Q 002238 737 RAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVT-TKVDVFSFGVILMELITGRKALDESQPEESMHLVTWF 815 (948)
Q Consensus 737 ~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~ 815 (948)
.+||+|||+++...... .....||+.|+|||++.+..+. .++||||||+++|||++|+.||..... . .
T Consensus 178 ~~kl~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~---~ 246 (312)
T 2iwi_A 178 CAKLIDFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE-----I---L 246 (312)
T ss_dssp EEEECCCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-----H---H
T ss_pred eEEEEEcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH-----H---h
Confidence 99999999998765432 3345699999999999877664 599999999999999999999965211 0 0
Q ss_pred HHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 816 RRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
..... +.. .....+.+++.+|++.+|++||++.|+++
T Consensus 247 ----~~~~~----~~~---------~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 247 ----EAELH----FPA---------HVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp ----HTCCC----CCT---------TSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred ----hhccC----Ccc---------cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00000 011 12245889999999999999999999987
No 253
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.1e-36 Score=343.26 Aligned_cols=249 Identities=25% Similarity=0.367 Sum_probs=186.4
Q ss_pred hcCCcccceecccCceEEEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCceEEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKLLVF 670 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 670 (948)
..+|+..++||+|+||+||.....+|+.||||++..... ..+.+|+++++.+ +|||||++++++.+....++||
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~-----~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~ 97 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF-----SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAI 97 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE-----EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH-----HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEE
Confidence 346888999999999997655556799999999865321 2357899999999 8999999999999999999999
Q ss_pred EecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcC-----CCCeEEeecCC
Q 002238 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD-----DMRAKVADFGL 745 (948)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~-----~~~~kl~DfGl 745 (948)
||++ |+|.+++.. ......+.+++.++.||+.||+|||+ .+|+||||||+|||++. ...+||+|||+
T Consensus 98 E~~~-g~L~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~ 169 (432)
T 3p23_A 98 ELCA-ATLQEYVEQ----KDFAHLGLEPITLLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGL 169 (432)
T ss_dssp ECCS-EEHHHHHHS----SSCCCCSSCHHHHHHHHHHHHHHHHH---TTCCCCCCSTTSEEECCCBTTTBCCEEECCTTE
T ss_pred ECCC-CCHHHHHHh----cCCCccchhHHHHHHHHHHHHHHHHH---CcCEeCCCCHHHEEEecCCCCCceeEEEecccc
Confidence 9996 699988853 22334445567899999999999997 89999999999999953 23588999999
Q ss_pred ceecCCCCC--ceeeeecccccccCceecc---cCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHhh
Q 002238 746 VRLAPEGKG--SIETRIAGTFGYLAPEYAV---TGRVTTKVDVFSFGVILMELIT-GRKALDESQPEESMHLVTWFRRIH 819 (948)
Q Consensus 746 a~~~~~~~~--~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 819 (948)
++....... .......||+.|+|||++. ...++.++|||||||++|||++ |..||.......... .
T Consensus 170 a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~--------~ 241 (432)
T 3p23_A 170 CKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANI--------L 241 (432)
T ss_dssp EECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHH--------H
T ss_pred eeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHH--------H
Confidence 986654322 2234467999999999997 4567889999999999999999 999996543322110 0
Q ss_pred cCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 820 LSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
...... .. ..........+.+++.+|++.||.+||++.++++
T Consensus 242 ~~~~~~-~~-------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 242 LGACSL-DC-------LHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp TTCCCC-TT-------SCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hccCCc-cc-------cCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 101000 00 1111223445789999999999999999999985
No 254
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=9.9e-36 Score=349.64 Aligned_cols=272 Identities=25% Similarity=0.376 Sum_probs=204.7
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEe------CC
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLD------GN 664 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~------~~ 664 (948)
.++|++.+.||+|+||.||+|... +|+.||||++... ......+.+.+|++++++++||||+++++++.. ++
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~-~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~ 91 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE-LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND 91 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSC-CCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence 368999999999999999999864 6899999998764 345556789999999999999999999998765 66
Q ss_pred ceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCC---eEEe
Q 002238 665 EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR---AKVA 741 (948)
Q Consensus 665 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~---~kl~ 741 (948)
..++||||+++|+|.+++... .....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++. +||+
T Consensus 92 ~~~LVmEy~~ggsL~~~L~~~--~~~~~lse~~i~~I~~QLl~aL~yLHs---~gIVHrDLKP~NILl~~~g~~~~vKL~ 166 (676)
T 3qa8_A 92 LPLLAMEYCEGGDLRKYLNQF--ENCCGLKEGPIRTLLSDISSALRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKII 166 (676)
T ss_dssp SCCCEEECCSSCBHHHHHHSS--SCTTCCCSSHHHHHHHHHHHHHHHHHH---TTBCCCCCCSTTEEEECCSSSCEEEEC
T ss_pred eEEEEEEeCCCCCHHHHHHhc--ccCCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEeecCCCceeEEEc
Confidence 779999999999999998542 222468889999999999999999997 89999999999999997765 9999
Q ss_pred ecCCceecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhh--
Q 002238 742 DFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIH-- 819 (948)
Q Consensus 742 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~-- 819 (948)
|||+++...... ......||+.|+|||++.+..++.++||||||+++|||++|+.||........ |.....
T Consensus 167 DFG~a~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~-----~~~~i~~~ 239 (676)
T 3qa8_A 167 DLGYAKELDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQ-----WHGKVREK 239 (676)
T ss_dssp SCCCCCBTTSCC--CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHH-----SSTTCC--
T ss_pred cccccccccccc--ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhh-----hhhhhhcc
Confidence 999998765433 23446799999999999999999999999999999999999999976432110 000000
Q ss_pred -----cCcccccc--ccCcccC-CccchHHHHHHHHHHHHHhcccCCCCCCChHH-----HHHHHHhhhh
Q 002238 820 -----LSKDSFHK--AIDPTID-LNEGILASISTVAELAGHCCAREPYQRPDMGH-----AVNVLSSLVE 876 (948)
Q Consensus 820 -----~~~~~~~~--~~~~~~~-~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~e-----v~~~L~~~~~ 876 (948)
........ .+...++ ...........+.+++.+|++.||++||++++ ..+.+..+..
T Consensus 240 ~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~ 309 (676)
T 3qa8_A 240 SNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILS 309 (676)
T ss_dssp ----CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHC
T ss_pred cchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHh
Confidence 00000000 0001111 01122335667999999999999999999988 5566666654
No 255
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=5.9e-35 Score=315.32 Aligned_cols=233 Identities=12% Similarity=0.056 Sum_probs=186.7
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCcCC-hhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVIS-GKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 669 (948)
.++|++.+.||+|+||.||+|... +|+.||||++...... ....+.+.+|+.++.+++||||+++++++.+++..|+|
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 467999999999999999999875 5899999999865433 34457899999999999999999999999999999999
Q ss_pred EEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceec
Q 002238 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (948)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~ 749 (948)
|||+++++|.+++.. . ....++.+|+.|++.||+|||+ .+|+||||||+|||++.++.+||+++|
T Consensus 110 ~e~~~g~~L~~~l~~------~-~~~~~~~~i~~ql~~aL~~lH~---~givH~Dikp~NIll~~~g~~kl~~~~----- 174 (286)
T 3uqc_A 110 AEWIRGGSLQEVADT------S-PSPVGAIRAMQSLAAAADAAHR---AGVALSIDHPSRVRVSIDGDVVLAYPA----- 174 (286)
T ss_dssp EECCCEEEHHHHHTT------C-CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEETTSCEEECSCC-----
T ss_pred EEecCCCCHHHHHhc------C-CChHHHHHHHHHHHHHHHHHHH---CCCccCCCCcccEEEcCCCCEEEEecc-----
Confidence 999999999998832 2 3455788999999999999997 899999999999999999999997443
Q ss_pred CCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCcccccccc
Q 002238 750 PEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHKAI 829 (948)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 829 (948)
|++| ++.++|||||||++|||++|+.||.+....+... .....+
T Consensus 175 ----------------~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~-------------~~~~~~ 218 (286)
T 3uqc_A 175 ----------------TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLA-------------PAERDT 218 (286)
T ss_dssp ----------------CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSE-------------ECCBCT
T ss_pred ----------------ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhH-------------HHHHHh
Confidence 4433 6889999999999999999999998765432100 000000
Q ss_pred CcccC-CccchHHHHHHHHHHHHHhcccCCCCCCChHHHHHHHHhhhh
Q 002238 830 DPTID-LNEGILASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVE 876 (948)
Q Consensus 830 ~~~~~-~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~L~~~~~ 876 (948)
..... ........+.++.+++.+|++.||.+| |+.|+++.|+++..
T Consensus 219 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~ 265 (286)
T 3uqc_A 219 AGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATA 265 (286)
T ss_dssp TSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC
T ss_pred ccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhc
Confidence 00000 001112233568999999999999999 99999999999864
No 256
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=6.2e-35 Score=353.99 Aligned_cols=241 Identities=21% Similarity=0.336 Sum_probs=195.6
Q ss_pred hcCCcccceecccCceEEEEEEEc--CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEeCCc----
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH--DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLDGNE---- 665 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~--~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~---- 665 (948)
.++|++.+.||+|+||.||+|.+. +|+.||||++... ........+.+|++++++++||||+++++++.+.+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 157 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHS-GDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDP 157 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSS-CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCcc-CCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCc
Confidence 478999999999999999999875 5899999998653 234456788999999999999999999999987665
Q ss_pred -eEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecC
Q 002238 666 -KLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 744 (948)
Q Consensus 666 -~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfG 744 (948)
.|+||||+++++|.+++. ..+++.+++.++.||+.||+|||+ .+||||||||+|||++.+ .+||+|||
T Consensus 158 ~~~lv~E~~~g~~L~~~~~-------~~l~~~~~~~~~~qi~~aL~~lH~---~giiHrDlkp~NIll~~~-~~kl~DFG 226 (681)
T 2pzi_A 158 VGYIVMEYVGGQSLKRSKG-------QKLPVAEAIAYLLEILPALSYLHS---IGLVYNDLKPENIMLTEE-QLKLIDLG 226 (681)
T ss_dssp EEEEEEECCCCEECC-----------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSS-CEEECCCT
T ss_pred eeEEEEEeCCCCcHHHHHh-------CCCCHHHHHHHHHHHHHHHHHHHH---CCCeecccChHHeEEeCC-cEEEEecc
Confidence 699999999999987662 268999999999999999999997 899999999999999975 99999999
Q ss_pred CceecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCccc
Q 002238 745 LVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLSKDS 824 (948)
Q Consensus 745 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 824 (948)
+++..... ....||++|+|||++.+.. +.++|||||||++|||++|.+||........
T Consensus 227 ~a~~~~~~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~---------------- 284 (681)
T 2pzi_A 227 AVSRINSF-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGL---------------- 284 (681)
T ss_dssp TCEETTCC-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSSC----------------
T ss_pred cchhcccC-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccccc----------------
Confidence 99876443 3456999999999987654 8999999999999999999988764221100
Q ss_pred cccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCC-hHHHHHHHHhhh
Q 002238 825 FHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPD-MGHAVNVLSSLV 875 (948)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt-~~ev~~~L~~~~ 875 (948)
............+.+++.+|++.||.+||+ ++++.+.|..+.
T Consensus 285 ---------~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 327 (681)
T 2pzi_A 285 ---------PEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL 327 (681)
T ss_dssp ---------CTTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred ---------cccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence 001111122346889999999999999995 666666666554
No 257
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=7.7e-34 Score=341.58 Aligned_cols=368 Identities=18% Similarity=0.131 Sum_probs=240.1
Q ss_pred CCEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEc
Q 002238 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEI 146 (948)
Q Consensus 68 ~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 146 (948)
..++.|+|++|++++..|..|.++++|++|+|++|.+.+..| .|.++++|++|+|++|++++++|..|+++++|++|+|
T Consensus 33 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 112 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFF 112 (606)
T ss_dssp TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEEC
T ss_pred CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeec
Confidence 579999999999998889999999999999999999999877 6999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccccCCCCccc-cccc--ceeccCC
Q 002238 147 DNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSG-SQIQ--SLWVNGQ 223 (948)
Q Consensus 147 s~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~l~--~l~~~~~ 223 (948)
++|+++. ..|..+.++++|++|++++|++++.....+. .+++|++|+|++|++++..|..|.. .+++ .|++.++
T Consensus 113 ~~n~i~~-l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~--~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n 189 (606)
T 3t6q_A 113 IQTGISS-IDFIPLHNQKTLESLYLGSNHISSIKLPKGF--PTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGN 189 (606)
T ss_dssp TTSCCSC-GGGSCCTTCTTCCEEECCSSCCCCCCCCTTC--CCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTC
T ss_pred cccCccc-CCcchhccCCcccEEECCCCcccccCccccc--CCcccCEEEcccCcccccChhhhhhhcccceeEEecCCC
Confidence 9999985 3367788999999999999999885444443 5888888888888888766655543 2344 3444333
Q ss_pred CCCCccCCC----------------------------------------------ccccccCC--CccEEEccCCccccc
Q 002238 224 NGNAKLGGG----------------------------------------------IDVIQNMT--SLKEIWLHSNAFSGP 255 (948)
Q Consensus 224 ~~~~~~~~~----------------------------------------------~~~l~~l~--~L~~L~Ls~N~l~~~ 255 (948)
......... ...+..+. +|+.|++++|.+++.
T Consensus 190 ~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~ 269 (606)
T 3t6q_A 190 DIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNI 269 (606)
T ss_dssp CCCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSC
T ss_pred ccCccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCcc
Confidence 222111100 01111111 566666666666665
Q ss_pred CCC-CCCCCCCcEEeccCCccccccchhhhCCCCCcEEEcccCcccccCC-CCCCccccccccccCCCCC-CCCCCCchh
Q 002238 256 LPD-FSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVP-EFDRSVSLDMAKGSNNFCL-PSPGACDPR 332 (948)
Q Consensus 256 ~~~-~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p-~~~~~~~l~~~~~~~~~~~-~~~~~~~~~ 332 (948)
.+. |..+++|+.|+|++|+++ .+|..+.++++|++|++++|++++..| .+..+.+|..++..+|... .++......
T Consensus 270 ~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~ 348 (606)
T 3t6q_A 270 SSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLEN 348 (606)
T ss_dssp CTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTT
T ss_pred CHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhc
Confidence 553 666667777777777766 566666666777777777777666555 3555556666665555432 222211111
Q ss_pred hhhhHHHHHhhCCcchhccccCCCCCCCCc--cceeecCCceEEEEccCCcccccCCccccCccccceEeCccccccccC
Q 002238 333 LNALLSVVKLMGYPQRFAENWKGNDPCSDW--IGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMI 410 (948)
Q Consensus 333 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~L~~L~ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~i 410 (948)
+..+.. .+..++...... ...+..+++|+.|++++|.+.+..|..|.++++|+.|+|++|++++..
T Consensus 349 l~~L~~------------L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 416 (606)
T 3t6q_A 349 LENLRE------------LDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKD 416 (606)
T ss_dssp CTTCCE------------EECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCT
T ss_pred cCcCCE------------EECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcc
Confidence 111100 001111000000 012334556677777777776666666777777777777777776655
Q ss_pred CcC-CcCCCCCcEEEccCCcccCCCCC----CCcccccccCCCCCC
Q 002238 411 PEG-LSVLGALKELDVSNNQLYGKIPS----FKSNAIVNTDGNPDI 451 (948)
Q Consensus 411 p~~-l~~l~~L~~L~ls~N~l~g~ip~----~~~~~~~~~~gnp~~ 451 (948)
|.. +..+++|++|++++|.+++.+|. +.....+.+++|+..
T Consensus 417 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 462 (606)
T 3t6q_A 417 AQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFP 462 (606)
T ss_dssp TCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCG
T ss_pred cchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCC
Confidence 543 66667777777777777665553 234455666666543
No 258
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.8e-34 Score=334.70 Aligned_cols=300 Identities=18% Similarity=0.208 Sum_probs=173.8
Q ss_pred CEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEcc
Q 002238 69 RITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEID 147 (948)
Q Consensus 69 ~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 147 (948)
+++.|+|++|++++..+..|.++++|++|+|++|.|++..| .|.++++|++|+|++|+++++++..|.++++|++|+|+
T Consensus 33 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 112 (477)
T 2id5_A 33 ETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDIS 112 (477)
T ss_dssp TCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECT
T ss_pred CCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECC
Confidence 44555555555555445555555555555555555555444 45555555555555555555555555555555555555
Q ss_pred CCCCCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccccCCCCcccccccceeccCCCCCC
Q 002238 148 NNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNA 227 (948)
Q Consensus 148 ~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~ 227 (948)
+|+++. ..|..+.++++|+.|++++|.+++..+..|. .+++|+.|+|++|++++..+.
T Consensus 113 ~n~i~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~--~l~~L~~L~l~~n~l~~~~~~------------------- 170 (477)
T 2id5_A 113 ENKIVI-LLDYMFQDLYNLKSLEVGDNDLVYISHRAFS--GLNSLEQLTLEKCNLTSIPTE------------------- 170 (477)
T ss_dssp TSCCCE-ECTTTTTTCTTCCEEEECCTTCCEECTTSST--TCTTCCEEEEESCCCSSCCHH-------------------
T ss_pred CCcccc-CChhHccccccCCEEECCCCccceeChhhcc--CCCCCCEEECCCCcCcccChh-------------------
Confidence 555553 3344455555555555555555555555554 455555555555555432222
Q ss_pred ccCCCccccccCCCccEEEccCCcccccCC-CCCCCCCCcEEeccCCccccccchhhhCCCCCcEEEcccCcccccCCCC
Q 002238 228 KLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEF 306 (948)
Q Consensus 228 ~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~ 306 (948)
.|.++++|+.|+|++|.+.+..+ .+..+++|+.|+|++|.+.+.+|..+....+|+.|+|++|++++..+.
T Consensus 171 -------~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~- 242 (477)
T 2id5_A 171 -------ALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYL- 242 (477)
T ss_dssp -------HHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHH-
T ss_pred -------HhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHH-
Confidence 23355566666666666655444 355556666666666555555555555555566666666655532111
Q ss_pred CCccccccccccCCCCCCCCCCCchhhhhhHHHHHhhCCcchhccccCCCCCCCCccceeecCCceEEEEccCCcccccC
Q 002238 307 DRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTI 386 (948)
Q Consensus 307 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~g~i 386 (948)
.+..+++|+.|+|++|.+++..
T Consensus 243 ----------------------------------------------------------~~~~l~~L~~L~Ls~n~l~~~~ 264 (477)
T 2id5_A 243 ----------------------------------------------------------AVRHLVYLRFLNLSYNPISTIE 264 (477)
T ss_dssp ----------------------------------------------------------HHTTCTTCCEEECCSSCCCEEC
T ss_pred ----------------------------------------------------------HhcCccccCeeECCCCcCCccC
Confidence 1223456777777777777777
Q ss_pred CccccCccccceEeCccccccccCCcCCcCCCCCcEEEccCCcccCCCCC----CCcccccccCCCCCCCCccC
Q 002238 387 SPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPS----FKSNAIVNTDGNPDIGKEKS 456 (948)
Q Consensus 387 p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~ip~----~~~~~~~~~~gnp~~~~~~~ 456 (948)
+..|.++++|+.|+|++|++++..|..|..+++|++|+|++|+|++..+. +.....+.+++||+.|.+..
T Consensus 265 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~ 338 (477)
T 2id5_A 265 GSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRL 338 (477)
T ss_dssp TTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGG
T ss_pred hhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccch
Confidence 77777777777777777777777777777777777777777777765543 23455677777777776543
No 259
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.1e-34 Score=343.98 Aligned_cols=373 Identities=17% Similarity=0.175 Sum_probs=239.5
Q ss_pred CCEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEc
Q 002238 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEI 146 (948)
Q Consensus 68 ~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 146 (948)
.+++.|+|++|++++..+..|.++++|++|+|++|++++..+ .|.++++|++|+|++|+++++++..|+++++|++|+|
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 356777777777776666667777777777777777776655 4666777777777777777777666777777777777
Q ss_pred cCCCCCCCCCC-ccccCCCCCCEEEccCccccc-cCCCCCCCCCCCCCcEEEcccccccccCCCCc--------------
Q 002238 147 DNNPFSSWEIP-QSLRNASGLQNFSANSANITG-QIPSFFGPDEFPGLTILHLAFNQLIGGLPASF-------------- 210 (948)
Q Consensus 147 s~N~l~~~~~p-~~~~~l~~L~~L~l~~n~l~~-~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~-------------- 210 (948)
++|+++. ++ ..+.++++|++|++++|.+++ .+|..|+ .+++|++|++++|++++..|..+
T Consensus 108 ~~n~l~~--l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~--~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~ 183 (570)
T 2z63_A 108 VETNLAS--LENFPIGHLKTLKELNVAHNLIQSFKLPEYFS--NLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLD 183 (570)
T ss_dssp TTSCCCC--STTCSCTTCTTCCEEECCSSCCCCCCCCGGGG--GCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEE
T ss_pred ccccccc--CCCccccccccccEEecCCCccceecChhhhc--ccCCCCEEeCcCCccceecHHHccchhccchhhhhcc
Confidence 7776663 33 246666677777777776665 3466665 56666666666666655444333
Q ss_pred --------------ccccccceeccCCCCC--------------------------------------------------
Q 002238 211 --------------SGSQIQSLWVNGQNGN-------------------------------------------------- 226 (948)
Q Consensus 211 --------------~~~~l~~l~~~~~~~~-------------------------------------------------- 226 (948)
....++.|++.++...
T Consensus 184 l~~n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~ 263 (570)
T 2z63_A 184 LSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFR 263 (570)
T ss_dssp CTTCCCCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEE
T ss_pred cCCCCceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhh
Confidence 2222333333221000
Q ss_pred -----CccCCCccccccCCCccEEEccCCcccccCCCC------------------------------------------
Q 002238 227 -----AKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDF------------------------------------------ 259 (948)
Q Consensus 227 -----~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~------------------------------------------ 259 (948)
...+..+..+..+++|+.|++++|.+++.++.+
T Consensus 264 l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~ 343 (570)
T 2z63_A 264 LAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSE 343 (570)
T ss_dssp EEETTEEESCSTTTTGGGTTCSEEEEESCEECSCCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCC
T ss_pred hhcchhhhhhchhhhcCcCcccEEEecCccchhhhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCcccccccc
Confidence 111222234455566666666666555322222
Q ss_pred CCCCCCcEEeccCCcccccc--chhhhCCCCCcEEEcccCcccccCCCCCCccccccccccCCCCCCCCC-CCchhhhhh
Q 002238 260 SGVKQLESLSLRDNFFTGPV--PDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPG-ACDPRLNAL 336 (948)
Q Consensus 260 ~~l~~L~~L~L~~N~l~~~~--p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~l 336 (948)
..+++|+.|++++|++++.. |..+..+++|+.|++++|.+++..+.+..+.+|..++..+|.....+. .....+..+
T Consensus 344 ~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L 423 (570)
T 2z63_A 344 VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNL 423 (570)
T ss_dssp CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTC
T ss_pred ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccccccccCCCCEEEccCCccccccchhhhhcCCCC
Confidence 34567777777777777543 677778888888888888887766666667777777776665443321 111111111
Q ss_pred HHHHHhhCCcchhccccCCCCCCCCccceeecCCceEEEEccCCccc-ccCCccccCccccceEeCccccccccCCcCCc
Q 002238 337 LSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLT-GTISPEFASFKSLQRLILADNNLSGMIPEGLS 415 (948)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~-g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~ 415 (948)
.. .+..++.........+..+++|+.|+|++|.+. +.+|..|..+++|++|+|++|++++..|..+.
T Consensus 424 ~~------------L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 491 (570)
T 2z63_A 424 IY------------LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFN 491 (570)
T ss_dssp CE------------EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTT
T ss_pred CE------------EeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhh
Confidence 11 111111111111123456778999999999998 68899999999999999999999988899999
Q ss_pred CCCCCcEEEccCCcccCCCCC----CCcccccccCCCCCCCCccC
Q 002238 416 VLGALKELDVSNNQLYGKIPS----FKSNAIVNTDGNPDIGKEKS 456 (948)
Q Consensus 416 ~l~~L~~L~ls~N~l~g~ip~----~~~~~~~~~~gnp~~~~~~~ 456 (948)
.+++|++|++++|++++.+|. +.....+.+++||+.|.++.
T Consensus 492 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 492 SLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp TCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred cccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcc
Confidence 999999999999999987764 34566788999999887653
No 260
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=7e-34 Score=309.72 Aligned_cols=231 Identities=20% Similarity=0.287 Sum_probs=179.6
Q ss_pred hcCCccc-ceecccCceEEEEEEE-cCCcEEEEEEeecCcCChhhHHHHHHHHHHH-HhcCCCceeeEEeEEEe----CC
Q 002238 592 TNNFSEE-NILGRGGFGTVYKGEL-HDGTKIAVKRMEAGVISGKGLTEFKSEIAVL-TKVRHRHLVALLGHCLD----GN 664 (948)
Q Consensus 592 ~~~~~~~-~~lg~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l-~~l~H~niv~l~~~~~~----~~ 664 (948)
.++|.+. +.||+|+||.||+|.. .+++.||||++... ..+.+|++++ +..+||||+++++++.. +.
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 88 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAGRK 88 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCc
Confidence 4567776 7899999999999987 47899999998642 4677899888 55699999999999876 66
Q ss_pred ceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcC---CCCeEEe
Q 002238 665 EKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD---DMRAKVA 741 (948)
Q Consensus 665 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~---~~~~kl~ 741 (948)
..++||||+++|+|.+++.. .....+++..++.++.|++.||+|||+ .+|+||||||+||+++. ++.+||+
T Consensus 89 ~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~kl~ 162 (299)
T 3m2w_A 89 CLLIVMECLDGGELFSRIQD---RGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLT 162 (299)
T ss_dssp EEEEEECCCCSCBHHHHHHH---CTTCCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEEC
T ss_pred eEEEEEeecCCCcHHHHHHh---ccCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEecCCCCCcEEEe
Confidence 78999999999999999854 233579999999999999999999997 89999999999999998 7889999
Q ss_pred ecCCceecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHhhcC
Q 002238 742 DFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDESQPEESMHLVTWFRRIHLS 821 (948)
Q Consensus 742 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 821 (948)
|||++.... +..++.++|||||||++|||++|+.||.........
T Consensus 163 Dfg~a~~~~-----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~------------ 207 (299)
T 3m2w_A 163 DFGFAKETT-----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS------------ 207 (299)
T ss_dssp CCTTCEECT-----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------------------
T ss_pred ccccccccc-----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh------------
Confidence 999986432 234678999999999999999999999765432210
Q ss_pred ccccccccCcccCCc-cchHHHHHHHHHHHHHhcccCCCCCCChHHHHHH
Q 002238 822 KDSFHKAIDPTIDLN-EGILASISTVAELAGHCCAREPYQRPDMGHAVNV 870 (948)
Q Consensus 822 ~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~~ 870 (948)
............... ........++.+++.+|++.||.+||++.|+++.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 208 PGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 000000111111101 0111234568999999999999999999999874
No 261
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=7.2e-35 Score=331.86 Aligned_cols=246 Identities=16% Similarity=0.160 Sum_probs=183.1
Q ss_pred hcCCcccceecccCceEEEEEEEc-CCcEEEEEEeecCc-CChhhHHHHHHHHHHHHhcCC-Cce---------------
Q 002238 592 TNNFSEENILGRGGFGTVYKGELH-DGTKIAVKRMEAGV-ISGKGLTEFKSEIAVLTKVRH-RHL--------------- 653 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~H-~ni--------------- 653 (948)
...|...++||+|+||.||+|++. +|+.||||++.... ......+.+.+|+.+++.++| +|.
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 345778899999999999999864 79999999987432 223346789999999999987 221
Q ss_pred ee------EEeEEEe-----CCceEEEEEecCCCChhHHHHhhh--hcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCe
Q 002238 654 VA------LLGHCLD-----GNEKLLVFEYMPQGTLSRHIFNWA--EEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSF 720 (948)
Q Consensus 654 v~------l~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~--~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i 720 (948)
+. ++.++.. ....+++|+++ +++|.+++.... ......+++..++.++.|+++||+|||+ .+|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~i 232 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGL 232 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH---TTE
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHh---CCc
Confidence 11 1111111 22457777765 689998885321 1223468889999999999999999997 899
Q ss_pred eecCCCCccEEEcCCCCeEEeecCCceecCCCCCceeeeecccccccCceec----------ccCCCCchhhHHHHHHHH
Q 002238 721 IHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYA----------VTGRVTTKVDVFSFGVIL 790 (948)
Q Consensus 721 vHrDik~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~Dv~s~Gv~l 790 (948)
|||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||||||++
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil 307 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAI 307 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHH
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHH
Confidence 99999999999999999999999998865432 344567 999999999 555688999999999999
Q ss_pred HHHHhCCCCCCCCCchhhhhHHHHHHHhhcCccccccccCcccCCccchHHHHHHHHHHHHHhcccCCCCCCChHHHHH
Q 002238 791 MELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHKAIDPTIDLNEGILASISTVAELAGHCCAREPYQRPDMGHAVN 869 (948)
Q Consensus 791 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~P~~RPt~~ev~~ 869 (948)
|||++|+.||......+.. ...+.... ..+..+.+++.+|++.||++||++.++++
T Consensus 308 ~elltg~~Pf~~~~~~~~~----------------~~~~~~~~-------~~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 308 YWIWCADLPNTDDAALGGS----------------EWIFRSCK-------NIPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HHHHHSSCCCCTTGGGSCS----------------GGGGSSCC-------CCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHHCCCCCCCcchhhhH----------------HHHHhhcc-------cCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 9999999999765432211 11111000 11246889999999999999999888765
No 262
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.1e-33 Score=340.32 Aligned_cols=368 Identities=20% Similarity=0.226 Sum_probs=243.1
Q ss_pred CCEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC-CcCCCCCCc--EEEcccccccCCCCccccCC------
Q 002238 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLE--VVMLSNNQFTSVPSDFFTGL------ 138 (948)
Q Consensus 68 ~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~--~L~L~~N~l~~~~~~~~~~l------ 138 (948)
.+++.|++++|.+++...+.+..+++|++|+|++|.+++..+ .|..+++|+ .|+|++|.++++++..|...
T Consensus 129 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~ 208 (606)
T 3t6q_A 129 KTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLN 208 (606)
T ss_dssp TTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTTCEEEEEE
T ss_pred CcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccChhHhhhccccccc
Confidence 467888888888886444455558888888888888877655 466777777 77777777777666554321
Q ss_pred ---------------------------------------------CCCCEEEccCCCCCCCCCCccccCCCCCCEEEccC
Q 002238 139 ---------------------------------------------SSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANS 173 (948)
Q Consensus 139 ---------------------------------------------~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~ 173 (948)
.+|+.|+|++|+++. ..+..+..+++|++|++++
T Consensus 209 l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~ 287 (606)
T 3t6q_A 209 FGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFN-ISSNTFHCFSGLQELDLTA 287 (606)
T ss_dssp CTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSS-CCTTTTTTCTTCSEEECTT
T ss_pred cCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCc-cCHHHhccccCCCEEeccC
Confidence 045666666666664 2344466667777777777
Q ss_pred ccccccCCCCCCCCCCCCCcEEEcccccccccCCCCccc-ccccceeccCCCCCCccCC-CccccccCCCccEEEccCCc
Q 002238 174 ANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSG-SQIQSLWVNGQNGNAKLGG-GIDVIQNMTSLKEIWLHSNA 251 (948)
Q Consensus 174 n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~l~~l~~~~~~~~~~~~~-~~~~l~~l~~L~~L~Ls~N~ 251 (948)
|+++ .+|..+. .+++|++|+|++|++.+..|..+.. .+++.|++.++ ..... ....+.++++|++|+|++|.
T Consensus 288 n~l~-~lp~~l~--~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n---~~~~~~~~~~~~~l~~L~~L~l~~n~ 361 (606)
T 3t6q_A 288 THLS-ELPSGLV--GLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGN---TKRLELGTGCLENLENLRELDLSHDD 361 (606)
T ss_dssp SCCS-CCCSSCC--SCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSC---SSCCBCCSSTTTTCTTCCEEECCSSC
T ss_pred CccC-CCChhhc--ccccCCEEECccCCcCcCchhhhhccCcCCEEECCCC---CcccccchhhhhccCcCCEEECCCCc
Confidence 7666 4555554 6666777777777666655555543 34444444432 22211 22335666777777777777
Q ss_pred ccccC--C-CCCCCCCCcEEeccCCccccccchhhhCCCCCcEEEcccCcccccCCC--CCCccccccccccCCCCCCCC
Q 002238 252 FSGPL--P-DFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPE--FDRSVSLDMAKGSNNFCLPSP 326 (948)
Q Consensus 252 l~~~~--~-~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~--~~~~~~l~~~~~~~~~~~~~~ 326 (948)
+++.. + .+..+++|+.|+|++|++.+..|..+..+++|+.|+|++|++++..|. +..+.+|..++..+|.....+
T Consensus 362 l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 441 (606)
T 3t6q_A 362 IETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISS 441 (606)
T ss_dssp CCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTC
T ss_pred cccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcC
Confidence 76643 2 466667777777777777666666677777777777777777665443 555666666666665544333
Q ss_pred CCCchhhhhhHHHHHhhCCcchhccccCCCCCCC---CccceeecCCceEEEEccCCcccccCCccccCccccceEeCcc
Q 002238 327 GACDPRLNALLSVVKLMGYPQRFAENWKGNDPCS---DWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILAD 403 (948)
Q Consensus 327 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~L~~L~ls~n~l~g~ip~~~~~l~~L~~L~Ls~ 403 (948)
......+..+.. .+..++.-.. .....+..+++|+.|+|++|++++.+|..|+++++|+.|+|++
T Consensus 442 ~~~~~~l~~L~~------------L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 509 (606)
T 3t6q_A 442 EQLFDGLPALQH------------LNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSH 509 (606)
T ss_dssp TTTTTTCTTCCE------------EECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred HHHHhCCCCCCE------------EECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCC
Confidence 222211111110 1111111000 0012345678999999999999999999999999999999999
Q ss_pred ccccccCCcCCcCCCCCcEEEccCCcccCCCCC----CCcccccccCCCCCCCCcc
Q 002238 404 NNLSGMIPEGLSVLGALKELDVSNNQLYGKIPS----FKSNAIVNTDGNPDIGKEK 455 (948)
Q Consensus 404 N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~ip~----~~~~~~~~~~gnp~~~~~~ 455 (948)
|++++.+|..+..++.| +|+|++|++++.+|. +.....+.++|||+.|.++
T Consensus 510 N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 510 NRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp SCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred CccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 99999999999999999 999999999998875 3456789999999998775
No 263
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=7e-33 Score=337.83 Aligned_cols=364 Identities=16% Similarity=0.148 Sum_probs=240.5
Q ss_pred CCEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEc
Q 002238 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEI 146 (948)
Q Consensus 68 ~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 146 (948)
.+++.|+|++|++++..+..|.++++|++|+|++|.+++..| .|.++++|++|+|++|.++++++..|+++++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 579999999999998777789999999999999999999877 5888999999999999999999888999999999999
Q ss_pred cCCCCCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccccCCCCccc---ccccceeccCC
Q 002238 147 DNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSG---SQIQSLWVNGQ 223 (948)
Q Consensus 147 s~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~---~~l~~l~~~~~ 223 (948)
++|++++ ..|..+.++++|++|++++|++++..|..++ .+++|++|+|++|++++..+..+.. ..++.|++.++
T Consensus 105 ~~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~--~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n 181 (680)
T 1ziw_A 105 MSNSIQK-IKNNPFVKQKNLITLDLSHNGLSSTKLGTQV--QLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSN 181 (680)
T ss_dssp CSSCCCC-CCSCTTTTCTTCCEEECCSSCCSCCCCCSSS--CCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTC
T ss_pred CCCccCc-cChhHccccCCCCEEECCCCcccccCchhhc--ccccCCEEEccCCcccccCHHHhhccccccccEEECCCC
Confidence 9999985 3457899999999999999999998888887 8999999999999998777665532 35666666544
Q ss_pred CCCCccCCCccccccC---------------------------CCccEEEccCCcccccCC-CCCCCCC--CcEEeccCC
Q 002238 224 NGNAKLGGGIDVIQNM---------------------------TSLKEIWLHSNAFSGPLP-DFSGVKQ--LESLSLRDN 273 (948)
Q Consensus 224 ~~~~~~~~~~~~l~~l---------------------------~~L~~L~Ls~N~l~~~~~-~~~~l~~--L~~L~L~~N 273 (948)
... +..+..+..+ ++|+.|+|++|.+++..+ .+.+++. |+.|+|++|
T Consensus 182 ~l~---~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n 258 (680)
T 1ziw_A 182 QIK---EFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYN 258 (680)
T ss_dssp CCC---CBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTS
T ss_pred ccc---ccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCC
Confidence 332 2222222222 455666666666666555 3444433 777777777
Q ss_pred ccccccchhhhCCCCCcEEEcccCcccccCCC-CCCccccccccccC---------------------------------
Q 002238 274 FFTGPVPDSLVKLESLKIVNMTNNLLQGPVPE-FDRSVSLDMAKGSN--------------------------------- 319 (948)
Q Consensus 274 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~~~l~~~~~~~--------------------------------- 319 (948)
++++..|..+..+++|+.|+|++|++++.+|. +..+.+|+.++..+
T Consensus 259 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~ 338 (680)
T 1ziw_A 259 NLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMED 338 (680)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCS
T ss_pred CcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCC
Confidence 77766666667777777777777777665553 44444444444433
Q ss_pred CCCCCCCCCCchhhhhhHHHHHhhCCcchhccccCCCCCCCCcc--ceee--cCCceEEEEccCCcccccCCccccCccc
Q 002238 320 NFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWI--GVTC--TKGNITVINFQKMNLTGTISPEFASFKS 395 (948)
Q Consensus 320 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~L~~L~ls~n~l~g~ip~~~~~l~~ 395 (948)
|....++...+..+..+..+ +..++......+ ..+. ...+|+.|++++|++++..|..|..+++
T Consensus 339 n~l~~~~~~~~~~l~~L~~L------------~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~ 406 (680)
T 1ziw_A 339 NDIPGIKSNMFTGLINLKYL------------SLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGH 406 (680)
T ss_dssp CCBCCCCTTTTTTCTTCCEE------------ECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTT
T ss_pred CccCCCChhHhccccCCcEE------------ECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCC
Confidence 32222221111111111000 000000000000 0001 1235677777777777777777777777
Q ss_pred cceEeCccccccccCC-cCCcCCCCCcEEEccCCcccCCCCC----CCcccccccCCCC
Q 002238 396 LQRLILADNNLSGMIP-EGLSVLGALKELDVSNNQLYGKIPS----FKSNAIVNTDGNP 449 (948)
Q Consensus 396 L~~L~Ls~N~l~g~ip-~~l~~l~~L~~L~ls~N~l~g~ip~----~~~~~~~~~~gnp 449 (948)
|+.|+|++|++++.+| ..+..+++|++|++++|++++..|. +.....+.+.+|.
T Consensus 407 L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~ 465 (680)
T 1ziw_A 407 LEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVA 465 (680)
T ss_dssp CCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSC
T ss_pred CCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhcccc
Confidence 7777777777776665 5667777777777777776654332 2334455555554
No 264
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=6.5e-33 Score=329.84 Aligned_cols=341 Identities=18% Similarity=0.167 Sum_probs=260.9
Q ss_pred CCEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEc
Q 002238 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEI 146 (948)
Q Consensus 68 ~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 146 (948)
.+++.|+|++|++++..|..|.++++|++|+|++|+|++..| .|.++++|++|+|++|+|+.++.. .+++|++|+|
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~---~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQNISCC---PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCCEECSC---CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCCccCcc---ccccCCEEEC
Confidence 589999999999998888899999999999999999999877 689999999999999999987765 8999999999
Q ss_pred cCCCCCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCC--cEEEcccccc--cccCCCCccccc--------
Q 002238 147 DNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGL--TILHLAFNQL--IGGLPASFSGSQ-------- 214 (948)
Q Consensus 147 s~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L--~~L~Ls~N~l--~~~~p~~~~~~~-------- 214 (948)
++|+++.+.+|..+.++++|++|++++|++++.. +. .+++| ++|+|++|++ ++..|..+....
T Consensus 129 s~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~~---~~--~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l 203 (562)
T 3a79_B 129 SFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQLD---LL--PVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVF 203 (562)
T ss_dssp CSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTTT---TG--GGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEE
T ss_pred CCCCccccCchHhhcccCcccEEecCCCccccCc---hh--hhhhceeeEEEeecccccccccCcccccccCcceEEEEe
Confidence 9999997666789999999999999999998642 32 45555 9999999998 777777665422
Q ss_pred ----------------ccceeccCCCCCCc----cCCCcccc---------------------------ccCCCccEEEc
Q 002238 215 ----------------IQSLWVNGQNGNAK----LGGGIDVI---------------------------QNMTSLKEIWL 247 (948)
Q Consensus 215 ----------------l~~l~~~~~~~~~~----~~~~~~~l---------------------------~~l~~L~~L~L 247 (948)
+..|...+...|.. ..+.+..+ ...++|++|++
T Consensus 204 ~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l 283 (562)
T 3a79_B 204 HPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNI 283 (562)
T ss_dssp CSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEE
T ss_pred cCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEE
Confidence 11111111111100 00000000 01125555666
Q ss_pred cCCcccccCCC-C-----------------------------------------------------CCCCCCcEEeccCC
Q 002238 248 HSNAFSGPLPD-F-----------------------------------------------------SGVKQLESLSLRDN 273 (948)
Q Consensus 248 s~N~l~~~~~~-~-----------------------------------------------------~~l~~L~~L~L~~N 273 (948)
++|+++|.+|. + ..+++|++|+|++|
T Consensus 284 ~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~L~l~~n 363 (562)
T 3a79_B 284 YNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQN 363 (562)
T ss_dssp EEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSS
T ss_pred eccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceEEECCCC
Confidence 66665544432 2 56789999999999
Q ss_pred ccccccchhhhCCCCCcEEEcccCcccccC--C-CCCCccccccccccCCCCCC-CCCCCchhhhhhHHHHHhhCCcchh
Q 002238 274 FFTGPVPDSLVKLESLKIVNMTNNLLQGPV--P-EFDRSVSLDMAKGSNNFCLP-SPGACDPRLNALLSVVKLMGYPQRF 349 (948)
Q Consensus 274 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~--p-~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~ 349 (948)
++++.+|..+.++++|+.|+|++|++++.. | .+..+.+|..++..+|.... ++..
T Consensus 364 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~--------------------- 422 (562)
T 3a79_B 364 VFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDR--------------------- 422 (562)
T ss_dssp CCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSC---------------------
T ss_pred ccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChh---------------------
Confidence 999989999999999999999999999743 3 36778888888888776543 3211
Q ss_pred ccccCCCCCCCCccceeecCCceEEEEccCCcccccCCccccCccccceEeCccccccccCCcCCcCCCCCcEEEccCCc
Q 002238 350 AENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQ 429 (948)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~ls~N~ 429 (948)
.+..+++|+.|+|++|++++.+|..+. ++|++|+|++|+|+ .+|..+..+++|++|+|++|+
T Consensus 423 ---------------~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~ 484 (562)
T 3a79_B 423 ---------------TCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQ 484 (562)
T ss_dssp ---------------CCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSC
T ss_pred ---------------hhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCC
Confidence 233457899999999999998887765 79999999999999 899888899999999999999
Q ss_pred ccCCCCC----CCcccccccCCCCCCCCcc
Q 002238 430 LYGKIPS----FKSNAIVNTDGNPDIGKEK 455 (948)
Q Consensus 430 l~g~ip~----~~~~~~~~~~gnp~~~~~~ 455 (948)
|++.++. +.....+.+++||+.|.++
T Consensus 485 l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 485 LKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp CCCCCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred CCCCCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence 9964443 3456678999999998875
No 265
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=5.3e-33 Score=327.70 Aligned_cols=337 Identities=19% Similarity=0.169 Sum_probs=248.5
Q ss_pred CCEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEc
Q 002238 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEI 146 (948)
Q Consensus 68 ~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 146 (948)
.+++.|+|++|++++..|..|.++++|++|+|++|+|++..| .|.++++|++|+|++|+|+.+++. .+++|++|+|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~---~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVKISCH---PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCEEECC---CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCceeecCcc---ccCCccEEec
Confidence 578889999999987777888899999999999999988766 788899999999999999876654 7889999999
Q ss_pred cCCCCCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCC--cEEEcccccc--cccCCCCcccc---------
Q 002238 147 DNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGL--TILHLAFNQL--IGGLPASFSGS--------- 213 (948)
Q Consensus 147 s~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L--~~L~Ls~N~l--~~~~p~~~~~~--------- 213 (948)
++|+++++.+|..++++++|++|++++|++++. .+. .+++| ++|+|++|++ .+..|..+...
T Consensus 98 ~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~---~~~--~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l 172 (520)
T 2z7x_B 98 SFNAFDALPICKEFGNMSQLKFLGLSTTHLEKS---SVL--PIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVF 172 (520)
T ss_dssp CSSCCSSCCCCGGGGGCTTCCEEEEEESSCCGG---GGG--GGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEEC
T ss_pred cCCccccccchhhhccCCcceEEEecCcccchh---hcc--ccccceeeEEEeecccccccccccccccccccceEEEEe
Confidence 999988766788889999999999998888752 232 45555 7777777766 55555444321
Q ss_pred ---------------------------------------------------------------------------cccce
Q 002238 214 ---------------------------------------------------------------------------QIQSL 218 (948)
Q Consensus 214 ---------------------------------------------------------------------------~l~~l 218 (948)
.++.|
T Consensus 173 ~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L 252 (520)
T 2z7x_B 173 PTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYF 252 (520)
T ss_dssp CSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEE
T ss_pred ccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEE
Confidence 11112
Q ss_pred eccCCCCCCccCCCcccc-----ccCCCc--------------------------cEEEccCCcccccCCCCCCCCCCcE
Q 002238 219 WVNGQNGNAKLGGGIDVI-----QNMTSL--------------------------KEIWLHSNAFSGPLPDFSGVKQLES 267 (948)
Q Consensus 219 ~~~~~~~~~~~~~~~~~l-----~~l~~L--------------------------~~L~Ls~N~l~~~~~~~~~l~~L~~ 267 (948)
++.+ +...+..+..+ .++++| +.|++++|.+.... .+..+++|++
T Consensus 253 ~l~~---n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~-~~~~l~~L~~ 328 (520)
T 2z7x_B 253 SISN---VKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHML-CPSKISPFLH 328 (520)
T ss_dssp EEEE---EEEESCCCCCCCCCCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCC-CCSSCCCCCE
T ss_pred Eeec---ccccCccccchhhcccccCceeEeccccccceecchhhhhcccccCceeEEEcCCCcccccc-chhhCCcccE
Confidence 2111 11222333333 444444 44444444443211 1257888999
Q ss_pred EeccCCccccccchhhhCCCCCcEEEcccCcccc--cCCC-CCCccccccccccCCCCCC-CCCCCchhhhhhHHHHHhh
Q 002238 268 LSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQG--PVPE-FDRSVSLDMAKGSNNFCLP-SPGACDPRLNALLSVVKLM 343 (948)
Q Consensus 268 L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g--~~p~-~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~ 343 (948)
|+|++|++++.+|..+.++++|+.|+|++|++++ .+|. +..+.+|..++..+|.... ++.
T Consensus 329 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~---------------- 392 (520)
T 2z7x_B 329 LDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKK---------------- 392 (520)
T ss_dssp EECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGG----------------
T ss_pred EEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCccccc----------------
Confidence 9999999998889999999999999999999986 3343 5667777777777765433 221
Q ss_pred CCcchhccccCCCCCCCCccceeecCCceEEEEccCCcccccCCccccCccccceEeCccccccccCCcCCcCCCCCcEE
Q 002238 344 GYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKEL 423 (948)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L 423 (948)
+.+..+++|+.|++++|.+++.+|..+. ++|+.|+|++|+|+ .+|..+..+++|++|
T Consensus 393 --------------------~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L 449 (520)
T 2z7x_B 393 --------------------GDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQEL 449 (520)
T ss_dssp --------------------CSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEE
T ss_pred --------------------chhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEE
Confidence 1233456899999999999998888775 79999999999999 899989999999999
Q ss_pred EccCCcccCCCCC----CCcccccccCCCCCCCCcc
Q 002238 424 DVSNNQLYGKIPS----FKSNAIVNTDGNPDIGKEK 455 (948)
Q Consensus 424 ~ls~N~l~g~ip~----~~~~~~~~~~gnp~~~~~~ 455 (948)
+|++|+|++.++. +.....+.+++||+.|.++
T Consensus 450 ~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 450 NVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ECCCCcCCccCHHHhccCCcccEEECcCCCCcccCC
Confidence 9999999964333 3456788999999998775
No 266
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=3.5e-34 Score=317.74 Aligned_cols=244 Identities=15% Similarity=0.143 Sum_probs=185.0
Q ss_pred hcCCcccceecccCceEEEEEEEcCCcEEEEEEeecCcC------ChhhHHHHHHHHHHHHhcC---------CCceeeE
Q 002238 592 TNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVI------SGKGLTEFKSEIAVLTKVR---------HRHLVAL 656 (948)
Q Consensus 592 ~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~------~~~~~~~~~~E~~~l~~l~---------H~niv~l 656 (948)
.++|++.+.||+|+||.||+|+. +|+.||||++..... .....+.+.+|+++++.++ |||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 45788899999999999999988 589999999986532 2233478899999999986 7888777
Q ss_pred EeEEE------------------------------eCCceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHH
Q 002238 657 LGHCL------------------------------DGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVA 706 (948)
Q Consensus 657 ~~~~~------------------------------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~ 706 (948)
.+++. +.+..++||||+++|++.+.+.. ..+++..+..++.||+
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~------~~~~~~~~~~i~~qi~ 171 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT------KLSSLATAKSILHQLT 171 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT------TCCCHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh------cCCCHHHHHHHHHHHH
Confidence 77643 26788999999999977666522 4689999999999999
Q ss_pred HHHHHHH-hccCCCeeecCCCCccEEEcCCC--------------------CeEEeecCCceecCCCCCceeeeeccccc
Q 002238 707 RGVEYLH-GLAHQSFIHRDLKPSNILLGDDM--------------------RAKVADFGLVRLAPEGKGSIETRIAGTFG 765 (948)
Q Consensus 707 ~~l~~LH-~~~~~~ivHrDik~~Nill~~~~--------------------~~kl~DfGla~~~~~~~~~~~~~~~gt~~ 765 (948)
.||+||| + .+|+||||||+|||++.++ .+||+|||+|+..... ...||+.
T Consensus 172 ~aL~~lH~~---~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~ 242 (336)
T 2vuw_A 172 ASLAVAEAS---LRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDV 242 (336)
T ss_dssp HHHHHHHHH---HCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCC
T ss_pred HHHHHHHHh---CCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeec
Confidence 9999999 7 7999999999999999887 8999999999866432 3479999
Q ss_pred ccCceecccCCCCchhhHHHHHHH-HHHHHhCCCCCCCCCchhhhhHHHHHHHhhcCccccccccCcccCCccchHHHHH
Q 002238 766 YLAPEYAVTGRVTTKVDVFSFGVI-LMELITGRKALDESQPEESMHLVTWFRRIHLSKDSFHKAIDPTIDLNEGILASIS 844 (948)
Q Consensus 766 y~aPE~~~~~~~~~~~Dv~s~Gv~-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (948)
|+|||++.+.. +.++||||+|++ .+++++|..||..... ...... .... ..................
T Consensus 243 y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~--~~~~~~---~~~~------~~~~~~~~~~~~~~~~s~ 310 (336)
T 2vuw_A 243 SMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLW--LHYLTD---KMLK------QMTFKTKCNTPAMKQIKR 310 (336)
T ss_dssp TTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHH--HHHHHH---HHHH------TCCCSSCCCSHHHHHHHH
T ss_pred ccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhh--hhHHHH---hhhh------hhccCcccchhhhhhcCH
Confidence 99999998766 899999998776 7788889888742100 000111 1000 000001111222344567
Q ss_pred HHHHHHHHhcccCCCCCCChHHHH
Q 002238 845 TVAELAGHCCAREPYQRPDMGHAV 868 (948)
Q Consensus 845 ~l~~li~~c~~~~P~~RPt~~ev~ 868 (948)
++.+++.+|++.| |++|++
T Consensus 311 ~~~dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 311 KIQEFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp HHHHHHHHGGGSS-----SHHHHH
T ss_pred HHHHHHHHHhccC-----CHHHHH
Confidence 7999999999966 888887
No 267
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.7e-32 Score=334.38 Aligned_cols=380 Identities=18% Similarity=0.188 Sum_probs=281.3
Q ss_pred CCEEEEEeCCCCCcCCCCccccCCCC--CcEEEcccCCCCCCCC-CcCCCCCCcEEEcccccccCCCCccccCCCCCCEE
Q 002238 68 KRITRIQIGHQNLQGTLPSNLQNLTK--LERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSI 144 (948)
Q Consensus 68 ~~v~~l~l~~~~l~~~~p~~l~~l~~--L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 144 (948)
..++.|++++|++++..|..|.+++. |++|+|++|.+++.+| .|..+++|++|+|++|.++++++..|.++++|+.|
T Consensus 222 ~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 301 (680)
T 1ziw_A 222 TSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYL 301 (680)
T ss_dssp SCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEE
T ss_pred ccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEE
Confidence 46888999999999888888888865 9999999999998776 68889999999999999999999999999999999
Q ss_pred EccCCCCCC----CCCCc----cccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEccccccccc--CCCCccc--
Q 002238 145 EIDNNPFSS----WEIPQ----SLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGG--LPASFSG-- 212 (948)
Q Consensus 145 ~Ls~N~l~~----~~~p~----~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~-- 212 (948)
+|++|...+ ..+|. .+..+++|++|++++|++++..+..|. .+++|++|+|++|.+... .+..|..
T Consensus 302 ~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~--~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~ 379 (680)
T 1ziw_A 302 NLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFT--GLINLKYLSLSNSFTSLRTLTNETFVSLA 379 (680)
T ss_dssp ECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTT--TCTTCCEEECTTCBSCCCEECTTTTGGGT
T ss_pred eccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhc--cccCCcEEECCCCchhhhhcchhhhcccc
Confidence 999876542 02333 678899999999999999998888887 889999999998875432 2222322
Q ss_pred -ccccceeccCCCCCCccCCCccccccCCCccEEEccCCcccccCC--CCCCCCCCcEEeccCCccccccchhhhCCCCC
Q 002238 213 -SQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP--DFSGVKQLESLSLRDNFFTGPVPDSLVKLESL 289 (948)
Q Consensus 213 -~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~--~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L 289 (948)
..++.|++. .|......+..|.++++|+.|+|++|++++.++ .+.++++|+.|+|++|++.+..+..+..+++|
T Consensus 380 ~~~L~~L~L~---~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L 456 (680)
T 1ziw_A 380 HSPLHILNLT---KNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSL 456 (680)
T ss_dssp TSCCCEEECT---TSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTC
T ss_pred cCcCceEECC---CCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCccc
Confidence 234445444 344444555677788888888888888887555 47778888888888888887777778888888
Q ss_pred cEEEcccCccc--ccCCC-CCCccccccccccCCCCCCCCCCCchhhhhhHHHHHhhCCcchhccccCCCCCCCCcccee
Q 002238 290 KIVNMTNNLLQ--GPVPE-FDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVT 366 (948)
Q Consensus 290 ~~L~Ls~N~l~--g~~p~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (948)
+.|++++|.++ +.+|. +..+.+|..++..+|....++...+..+..+..+.-. ...+..-+.+..|. .....+
T Consensus 457 ~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls---~N~l~~~~~~~~~~-~~~~~~ 532 (680)
T 1ziw_A 457 QRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQ---HNNLARLWKHANPG-GPIYFL 532 (680)
T ss_dssp CEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC---SSCCGGGGSTTSTT-SCCCTT
T ss_pred ccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCC---CCCccccchhhccC-Ccchhh
Confidence 88888888776 34443 6667777777777776666654443333222111100 00011001111000 001124
Q ss_pred ecCCceEEEEccCCcccccCCccccCccccceEeCccccccccCCcCCcCCCCCcEEEccCCcccCCCCC-----CCccc
Q 002238 367 CTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPS-----FKSNA 441 (948)
Q Consensus 367 ~~~~~L~~L~ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~ip~-----~~~~~ 441 (948)
..+++|+.|+|++|+++...+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++.+|. +....
T Consensus 533 ~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~ 612 (680)
T 1ziw_A 533 KGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLT 612 (680)
T ss_dssp TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCS
T ss_pred cCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccC
Confidence 5678999999999999955555799999999999999999977777789999999999999999998773 45677
Q ss_pred ccccCCCCCCCCccC
Q 002238 442 IVNTDGNPDIGKEKS 456 (948)
Q Consensus 442 ~~~~~gnp~~~~~~~ 456 (948)
.+.++||||.|.+..
T Consensus 613 ~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 613 ELDMRFNPFDCTCES 627 (680)
T ss_dssp EEECTTCCCCBCCCC
T ss_pred EEEccCCCcccCCcc
Confidence 899999999998864
No 268
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.2e-32 Score=333.20 Aligned_cols=373 Identities=19% Similarity=0.163 Sum_probs=275.3
Q ss_pred CCEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEc
Q 002238 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEI 146 (948)
Q Consensus 68 ~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 146 (948)
..++.|+|++|+|++..+.+|.++++|++|+|++|+|++++| +|.+|++|++|+|++|+|+++++++|.++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 479999999999998878899999999999999999999887 6999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCccccCCCCCCEEEccCcccccc-CCCCCCCCCCCCCcEEEcccccccccCCCCcccc-c----------
Q 002238 147 DNNPFSSWEIPQSLRNASGLQNFSANSANITGQ-IPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGS-Q---------- 214 (948)
Q Consensus 147 s~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~-~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~---------- 214 (948)
++|+++. ..+..|+++++|++|+|++|.+++. +|..++ .+++|++|+|++|++++..+..|... +
T Consensus 132 s~N~l~~-l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~--~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~l 208 (635)
T 4g8a_A 132 VETNLAS-LENFPIGHLKTLKELNVAHNLIQSFKLPEYFS--NLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDL 208 (635)
T ss_dssp TTSCCCC-STTCCCTTCTTCCEEECCSSCCCCCCCCGGGG--GCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEEC
T ss_pred CCCcCCC-CChhhhhcCcccCeeccccCccccCCCchhhc--cchhhhhhcccCccccccccccccchhhhhhhhhhhhc
Confidence 9999995 3345799999999999999999864 577776 89999999999999987766544210 0
Q ss_pred -----------------ccceeccCC------------------------------------------------------
Q 002238 215 -----------------IQSLWVNGQ------------------------------------------------------ 223 (948)
Q Consensus 215 -----------------l~~l~~~~~------------------------------------------------------ 223 (948)
+..+.+.+.
T Consensus 209 s~n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~ 288 (635)
T 4g8a_A 209 SLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRL 288 (635)
T ss_dssp TTCCCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEE
T ss_pred ccCcccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhh
Confidence 000000000
Q ss_pred --------------------------------------------------CCCCccC----------------CCccccc
Q 002238 224 --------------------------------------------------NGNAKLG----------------GGIDVIQ 237 (948)
Q Consensus 224 --------------------------------------------------~~~~~~~----------------~~~~~l~ 237 (948)
....... ..+....
T Consensus 289 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~ 368 (635)
T 4g8a_A 289 AYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEV 368 (635)
T ss_dssp ECCCSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCC
T ss_pred hhhcccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccc
Confidence 0000000 0000112
Q ss_pred cCCCccEEEccCCccccc--CC-CCCCCCCCcEEeccCCccccccchhhhCCCCCcEEEcccCcccccCCC--CCCcccc
Q 002238 238 NMTSLKEIWLHSNAFSGP--LP-DFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPE--FDRSVSL 312 (948)
Q Consensus 238 ~l~~L~~L~Ls~N~l~~~--~~-~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~--~~~~~~l 312 (948)
++++|+.|++++|.+... .+ .+..+.+|+.|++..|.+. .++..+..+++|+.+++++|++....+. +..+..+
T Consensus 369 ~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~-~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l 447 (635)
T 4g8a_A 369 DLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNL 447 (635)
T ss_dssp BCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEE-EECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTC
T ss_pred cccccccchhhccccccccccccchhhhhhhhhhhccccccc-cccccccccccccchhhhhcccccccccccccccccc
Confidence 467788899999988652 22 2455677888888888777 4556677778888888887777665442 4556666
Q ss_pred ccccccCCCCCCCCCCCchhhhhhHHHHHhhCCcchhccccCCCCCCCC-ccceeecCCceEEEEccCCcccccCCcccc
Q 002238 313 DMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSD-WIGVTCTKGNITVINFQKMNLTGTISPEFA 391 (948)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L~~L~ls~n~l~g~ip~~~~ 391 (948)
..++...|.....+.........+. .....++..... ....+..+++|+.|+|++|++++.+|..|.
T Consensus 448 ~~l~ls~n~l~~~~~~~~~~~~~L~------------~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~ 515 (635)
T 4g8a_A 448 IYLDISHTHTRVAFNGIFNGLSSLE------------VLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFN 515 (635)
T ss_dssp CEEECTTSCCEECCTTTTTTCTTCC------------EEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTT
T ss_pred ccccccccccccccccccccchhhh------------hhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHc
Confidence 6666665554433322221111110 011111110000 012455678999999999999999999999
Q ss_pred CccccceEeCccccccccCCcCCcCCCCCcEEEccCCcccCCCCCC-----CcccccccCCCCCCCCccC
Q 002238 392 SFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPSF-----KSNAIVNTDGNPDIGKEKS 456 (948)
Q Consensus 392 ~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~ip~~-----~~~~~~~~~gnp~~~~~~~ 456 (948)
++++|++|+|++|+|++..|..|..+++|++|||++|+|++.+|.. .....+.+++|||.|.+..
T Consensus 516 ~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~ 585 (635)
T 4g8a_A 516 SLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEH 585 (635)
T ss_dssp TCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGG
T ss_pred CCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCc
Confidence 9999999999999999998999999999999999999999998853 3466789999999998763
No 269
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.2e-32 Score=329.37 Aligned_cols=308 Identities=15% Similarity=0.141 Sum_probs=235.7
Q ss_pred CCEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEc
Q 002238 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEI 146 (948)
Q Consensus 68 ~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 146 (948)
.+++.+++++|.+....+..|.++++|++|+|++|.|++.+| .|..+++|++|+|++|.|++++|..|+++++|++|+|
T Consensus 51 ~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 130 (597)
T 3oja_B 51 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 130 (597)
T ss_dssp CCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEe
Confidence 467889999999986666668899999999999999999887 8999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCcc-ccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccccCCCCcccccccceeccCCCC
Q 002238 147 DNNPFSSWEIPQS-LRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNG 225 (948)
Q Consensus 147 s~N~l~~~~~p~~-~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~ 225 (948)
++|.++ .+|.. |.++++|++|+|++|.+++..|..|+ .+++|++|+|++|++++..+..+ ..+..|++.++..
T Consensus 131 ~~n~l~--~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~--~l~~L~~L~L~~N~l~~~~~~~l--~~L~~L~l~~n~l 204 (597)
T 3oja_B 131 ERNDLS--SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQ--ATTSLQNLQLSSNRLTHVDLSLI--PSLFHANVSYNLL 204 (597)
T ss_dssp CSSCCC--CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTT--TCTTCCEEECTTSCCSBCCGGGC--TTCSEEECCSSCC
T ss_pred eCCCCC--CCCHHHhccCCCCCEEEeeCCcCCCCChhhhh--cCCcCcEEECcCCCCCCcChhhh--hhhhhhhcccCcc
Confidence 999999 45554 68999999999999999999998887 89999999999999997643333 3456665554322
Q ss_pred CCccCCCccccccCCCccEEEccCCcccccCCCCCCCCCCcEEeccCCccccccchhhhCCCCCcEEEcccCcccccCCC
Q 002238 226 NAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPE 305 (948)
Q Consensus 226 ~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~ 305 (948)
..+...++|+.|++++|.++...+.+. ++|+.|+|++|.+++ +..+..+++|+.|+|++|.+++.+|.
T Consensus 205 --------~~l~~~~~L~~L~ls~n~l~~~~~~~~--~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~ 272 (597)
T 3oja_B 205 --------STLAIPIAVEELDASHNSINVVRGPVN--VELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYH 272 (597)
T ss_dssp --------SEEECCTTCSEEECCSSCCCEEECSCC--SCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESG
T ss_pred --------ccccCCchhheeeccCCcccccccccC--CCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHH
Confidence 123456788999999999887555432 689999999999985 46788899999999999999887664
Q ss_pred -CCCccccccccccCCCCCCCCCCCchhhhhhHHHHHhhCCcchhccccCCCCCCCCccceeecCCceEEEEccCCcccc
Q 002238 306 -FDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTG 384 (948)
Q Consensus 306 -~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~g 384 (948)
+.. +++|+.|+|++|.+++
T Consensus 273 ~~~~------------------------------------------------------------l~~L~~L~Ls~N~l~~ 292 (597)
T 3oja_B 273 PFVK------------------------------------------------------------MQRLERLYISNNRLVA 292 (597)
T ss_dssp GGTT------------------------------------------------------------CSSCCEEECTTSCCCE
T ss_pred HhcC------------------------------------------------------------ccCCCEEECCCCCCCC
Confidence 223 3456666666666665
Q ss_pred cCCccccCccccceEeCccccccccCCcCCcCCCCCcEEEccCCcccCCCC-CCCcccccccCCCCCCCCcc
Q 002238 385 TISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIP-SFKSNAIVNTDGNPDIGKEK 455 (948)
Q Consensus 385 ~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~ip-~~~~~~~~~~~gnp~~~~~~ 455 (948)
+|..+..+++|+.|+|++|+|+ .+|..+..+++|++|+|++|+|++..+ .+.....+.+++||+.|.+.
T Consensus 293 -l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~~~~~~~ 362 (597)
T 3oja_B 293 -LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKNLTLSHNDWDCNSL 362 (597)
T ss_dssp -EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCCCCTTCCCSEEECCSSCEEHHHH
T ss_pred -CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcChhhcCCCCEEEeeCCCCCChhH
Confidence 3555556666666666666666 556666666666666666666665432 24445556666666665543
No 270
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=7.6e-33 Score=332.93 Aligned_cols=338 Identities=19% Similarity=0.270 Sum_probs=284.6
Q ss_pred CCEEEEEeCCCCCcCC-----------------CCcccc--CCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEccccc-
Q 002238 68 KRITRIQIGHQNLQGT-----------------LPSNLQ--NLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQ- 126 (948)
Q Consensus 68 ~~v~~l~l~~~~l~~~-----------------~p~~l~--~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~- 126 (948)
.+++.|+|++|.++|. +|+.++ ++++|++|+|++|.+.+.+| .|.++++|++|+|++|+
T Consensus 206 ~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~ 285 (636)
T 4eco_A 206 TKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRG 285 (636)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTT
T ss_pred cCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCC
Confidence 6899999999999996 999999 99999999999999999888 79999999999999998
Q ss_pred ccC-CCCccccCC------CCCCEEEccCCCCCCCCCCc--cccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEc
Q 002238 127 FTS-VPSDFFTGL------SSLQSIEIDNNPFSSWEIPQ--SLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHL 197 (948)
Q Consensus 127 l~~-~~~~~~~~l------~~L~~L~Ls~N~l~~~~~p~--~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L 197 (948)
+++ ..|..++.+ ++|++|+|++|+++ .+|. .+.++++|++|++++|+++|.+| .|+ .+++|++|+|
T Consensus 286 l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~--~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~--~l~~L~~L~L 360 (636)
T 4eco_A 286 ISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK--TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFG--SEIKLASLNL 360 (636)
T ss_dssp SCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS--SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCE--EEEEESEEEC
T ss_pred CccccchHHHHhhhccccCCCCCEEECCCCcCC--ccCchhhhccCCCCCEEeCcCCcCccchh-hhC--CCCCCCEEEC
Confidence 998 777778776 99999999999999 7898 99999999999999999999999 776 8999999999
Q ss_pred ccccccccCCCCccc-cc-ccceeccCCCCCCccCCCccccccCC--CccEEEccCCcccccCCC-CC-------CCCCC
Q 002238 198 AFNQLIGGLPASFSG-SQ-IQSLWVNGQNGNAKLGGGIDVIQNMT--SLKEIWLHSNAFSGPLPD-FS-------GVKQL 265 (948)
Q Consensus 198 s~N~l~~~~p~~~~~-~~-l~~l~~~~~~~~~~~~~~~~~l~~l~--~L~~L~Ls~N~l~~~~~~-~~-------~l~~L 265 (948)
++|+++ .+|..+.. .+ |+.|++.++... ..+..+..++ +|+.|+|++|++++.+|. +. .+.+|
T Consensus 361 ~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~----~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L 435 (636)
T 4eco_A 361 AYNQIT-EIPANFCGFTEQVENLSFAHNKLK----YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINV 435 (636)
T ss_dssp CSSEEE-ECCTTSEEECTTCCEEECCSSCCS----SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCE
T ss_pred CCCccc-cccHhhhhhcccCcEEEccCCcCc----ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCC
Confidence 999999 88888765 34 777777655433 4555666554 899999999999997763 66 67899
Q ss_pred cEEeccCCccccccchh-hhCCCCCcEEEcccCcccccCCCCCCcc--------ccccccccCCCCCCCCCCCchhhhhh
Q 002238 266 ESLSLRDNFFTGPVPDS-LVKLESLKIVNMTNNLLQGPVPEFDRSV--------SLDMAKGSNNFCLPSPGACDPRLNAL 336 (948)
Q Consensus 266 ~~L~L~~N~l~~~~p~~-l~~l~~L~~L~Ls~N~l~g~~p~~~~~~--------~l~~~~~~~~~~~~~~~~~~~~~~~l 336 (948)
+.|+|++|+++ .+|.. +..+++|+.|+|++|+++...+...... +|..++..+|.+..+|..
T Consensus 436 ~~L~Ls~N~l~-~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~-------- 506 (636)
T 4eco_A 436 SSINLSNNQIS-KFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLTKLSDD-------- 506 (636)
T ss_dssp EEEECCSSCCC-SCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCCBCCGG--------
T ss_pred CEEECcCCccC-cCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcCCcCCccChh--------
Confidence 99999999999 55554 5569999999999999994444333322 777777777765544311
Q ss_pred HHHHHhhCCcchhccccCCCCCCCCcccee-ecCCceEEEEccCCcccccCCccccCccccceEeC------cccccccc
Q 002238 337 LSVVKLMGYPQRFAENWKGNDPCSDWIGVT-CTKGNITVINFQKMNLTGTISPEFASFKSLQRLIL------ADNNLSGM 409 (948)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~L~~L~ls~n~l~g~ip~~~~~l~~L~~L~L------s~N~l~g~ 409 (948)
.+ ..+++|+.|+|++|++++ +|..++++++|+.|+| ++|++.+.
T Consensus 507 ----------------------------~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~ 557 (636)
T 4eco_A 507 ----------------------------FRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLRE 557 (636)
T ss_dssp ----------------------------GSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCC
T ss_pred ----------------------------hhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCccccc
Confidence 01 256789999999999998 9999999999999999 56889999
Q ss_pred CCcCCcCCCCCcEEEccCCcccCCCCC--CCcccccccCCCCCCCCc
Q 002238 410 IPEGLSVLGALKELDVSNNQLYGKIPS--FKSNAIVNTDGNPDIGKE 454 (948)
Q Consensus 410 ip~~l~~l~~L~~L~ls~N~l~g~ip~--~~~~~~~~~~gnp~~~~~ 454 (948)
+|..+..+++|++|+|++|+| +.+|. +.....+.+++||+.|-.
T Consensus 558 ~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~~~L~~L~Ls~N~l~~~~ 603 (636)
T 4eco_A 558 WPEGITLCPSLTQLQIGSNDI-RKVNEKITPNISVLDIKDNPNISID 603 (636)
T ss_dssp CCTTGGGCSSCCEEECCSSCC-CBCCSCCCTTCCEEECCSCTTCEEE
T ss_pred ChHHHhcCCCCCEEECCCCcC-CccCHhHhCcCCEEECcCCCCcccc
Confidence 999999999999999999999 77775 345778899999998643
No 271
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2e-32 Score=317.22 Aligned_cols=330 Identities=17% Similarity=0.179 Sum_probs=257.2
Q ss_pred CCEEEEEeCCCCCcCCC-CccccCCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEcccccccCCCCc--cccCCCCCCE
Q 002238 68 KRITRIQIGHQNLQGTL-PSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSD--FFTGLSSLQS 143 (948)
Q Consensus 68 ~~v~~l~l~~~~l~~~~-p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~--~~~~l~~L~~ 143 (948)
.+++.|+|++|.+.+.+ +..|.++++|++|+|++|.+++..| .|.++++|++|+|++|.+++..+. .|..+++|++
T Consensus 54 ~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~ 133 (455)
T 3v47_A 54 QDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEM 133 (455)
T ss_dssp TTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCE
T ss_pred ccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCE
Confidence 58999999999998776 4679999999999999999999876 799999999999999999985444 4999999999
Q ss_pred EEccCCCCCCCCCCcc-ccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccccCCCCcc---------cc
Q 002238 144 IEIDNNPFSSWEIPQS-LRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFS---------GS 213 (948)
Q Consensus 144 L~Ls~N~l~~~~~p~~-~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~---------~~ 213 (948)
|+|++|++++ ..|.. +.++++|++|++++|++++..+..+.....++|+.|++++|.+.+..+..+. ..
T Consensus 134 L~L~~n~l~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~ 212 (455)
T 3v47_A 134 LVLRDNNIKK-IQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNT 212 (455)
T ss_dssp EECCSSBCCS-CCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTC
T ss_pred EECCCCccCc-cCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccc
Confidence 9999999996 44665 8899999999999999999999887622236888888888888865554432 12
Q ss_pred cccceeccCCCCCCccCCCccccccC---CCccEEEccCCcccccCCC-----------CCC--CCCCcEEeccCCcccc
Q 002238 214 QIQSLWVNGQNGNAKLGGGIDVIQNM---TSLKEIWLHSNAFSGPLPD-----------FSG--VKQLESLSLRDNFFTG 277 (948)
Q Consensus 214 ~l~~l~~~~~~~~~~~~~~~~~l~~l---~~L~~L~Ls~N~l~~~~~~-----------~~~--l~~L~~L~L~~N~l~~ 277 (948)
.++.|++. .|...+..+..+..+ ++|+.|++++|.+.+.... +.+ .++|+.|+|++|.+++
T Consensus 213 ~L~~L~Ls---~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~ 289 (455)
T 3v47_A 213 SITTLDLS---GNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFA 289 (455)
T ss_dssp EEEEEECT---TSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCE
T ss_pred eeeeEecC---CCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccc
Confidence 34455444 344444344433333 7788888887765542111 111 2578888888888887
Q ss_pred ccchhhhCCCCCcEEEcccCcccccCC-CCCCccccccccccCCCCCCCCCCCchhhhhhHHHHHhhCCcchhccccCCC
Q 002238 278 PVPDSLVKLESLKIVNMTNNLLQGPVP-EFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGN 356 (948)
Q Consensus 278 ~~p~~l~~l~~L~~L~Ls~N~l~g~~p-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 356 (948)
.+|..+..+++|++|+|++|++++..| .+..+.+|..++..+|....++.
T Consensus 290 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~----------------------------- 340 (455)
T 3v47_A 290 LLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDS----------------------------- 340 (455)
T ss_dssp ECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECG-----------------------------
T ss_pred cchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcCh-----------------------------
Confidence 778888888888888888888887766 36667777777776665432211
Q ss_pred CCCCCccceeecCCceEEEEccCCcccccCCccccCccccceEeCccccccccCCcCCcCCCCCcEEEccCCcccCCCCC
Q 002238 357 DPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPS 436 (948)
Q Consensus 357 ~~~~~~~~~~~~~~~L~~L~ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~ip~ 436 (948)
..+..+++|+.|+|++|++++..|..|.++++|++|+|++|+|++..+..+..+++|++|+|++|++++.+|.
T Consensus 341 -------~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 341 -------RMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp -------GGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred -------hHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCc
Confidence 1233567899999999999999999999999999999999999977777789999999999999999999986
Q ss_pred C
Q 002238 437 F 437 (948)
Q Consensus 437 ~ 437 (948)
.
T Consensus 414 ~ 414 (455)
T 3v47_A 414 I 414 (455)
T ss_dssp T
T ss_pred c
Confidence 4
No 272
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=3.9e-33 Score=307.21 Aligned_cols=282 Identities=12% Similarity=0.150 Sum_probs=168.2
Q ss_pred CCChHHHHHHHHHHHhc-CCCCCC--CCC-----CCCCCCccceEEeCCCCEEEEEeCCCCCcCCCCccc--cCCCCCcE
Q 002238 27 SGDDGDAAVMLALKKSL-NPPESL--GWS-----DTDPCKWNHVVCIEDKRITRIQIGHQNLQGTLPSNL--QNLTKLER 96 (948)
Q Consensus 27 ~~~~~d~~~l~~~k~~~-~~~~~~--~w~-----~~~~C~w~gv~c~~~~~v~~l~l~~~~l~~~~p~~l--~~l~~L~~ 96 (948)
++-.+|++||++||+++ .++..| +|. ..++|.|.|+.|... +..+ ....+++.
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~-----------------~~~l~~~~~~~l~~ 85 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKAT-----------------ADLLEDATQPGRVA 85 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHH-----------------HHHHHHHTSTTCCE
T ss_pred ccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhh-----------------HHHHhcccccceeE
Confidence 34567999999999998 455455 672 467899999999421 0000 11234444
Q ss_pred EEcccCCCCCCCCCcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEccCCCCCCCCCCccccCCCCCCEEEccCccc
Q 002238 97 LELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANI 176 (948)
Q Consensus 97 L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l 176 (948)
|+|++|.|+.+++.+.++++|++|+|++|.++ .+|..|+++++|++|+|++|+++ .+|..+.++++|++|++++|++
T Consensus 86 L~L~~n~l~~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~--~lp~~l~~l~~L~~L~L~~n~~ 162 (328)
T 4fcg_A 86 LELRSVPLPQFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR--ALPASIASLNRLRELSIRACPE 162 (328)
T ss_dssp EEEESSCCSSCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC--CCCGGGGGCTTCCEEEEEEETT
T ss_pred EEccCCCchhcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc--cCcHHHhcCcCCCEEECCCCCC
Confidence 44444444433334444444555555555544 23344555555555555555555 4455555555555555555555
Q ss_pred cccCCCCCCCCCCCCCcEEEcccccccccCCCCcccccccceeccCCCCCCccCCCccccccCCCccEEEccCCcccccC
Q 002238 177 TGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPL 256 (948)
Q Consensus 177 ~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~ 256 (948)
.+.+|..+. . + .++. .|.++++|++|+|++|+++..+
T Consensus 163 ~~~~p~~~~--~-----------~----~~~~--------------------------~~~~l~~L~~L~L~~n~l~~lp 199 (328)
T 4fcg_A 163 LTELPEPLA--S-----------T----DASG--------------------------EHQGLVNLQSLRLEWTGIRSLP 199 (328)
T ss_dssp CCCCCSCSE--E-----------E----C-CC--------------------------CEEESTTCCEEEEEEECCCCCC
T ss_pred ccccChhHh--h-----------c----cchh--------------------------hhccCCCCCEEECcCCCcCcch
Confidence 555555442 1 0 0000 1234555555555555555322
Q ss_pred CCCCCCCCCcEEeccCCccccccchhhhCCCCCcEEEcccCcccccCCCCCCccccccccccCCCCCCCCCCCchhhhhh
Q 002238 257 PDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNAL 336 (948)
Q Consensus 257 ~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 336 (948)
..+..+++|+.|+|++|+++ .+|..+..+++|++|+|++|++.+.+|..
T Consensus 200 ~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~------------------------------ 248 (328)
T 4fcg_A 200 ASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPI------------------------------ 248 (328)
T ss_dssp GGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEEECTTCTTCCBCCCC------------------------------
T ss_pred HhhcCCCCCCEEEccCCCCC-cCchhhccCCCCCEEECcCCcchhhhHHH------------------------------
Confidence 24555566666666666666 34555666666666666666666555531
Q ss_pred HHHHHhhCCcchhccccCCCCCCCCccceeecCCceEEEEccCCcccccCCccccCccccceEeCccccccccCCcCCcC
Q 002238 337 LSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSV 416 (948)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~ 416 (948)
+..+++|+.|+|++|++.+.+|..|+++++|+.|+|++|++.+.+|..+..
T Consensus 249 -----------------------------~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~ 299 (328)
T 4fcg_A 249 -----------------------------FGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQ 299 (328)
T ss_dssp -----------------------------TTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGG
T ss_pred -----------------------------hcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhh
Confidence 112335666677777777777777888888888888888888888888888
Q ss_pred CCCCcEEEccCCccc
Q 002238 417 LGALKELDVSNNQLY 431 (948)
Q Consensus 417 l~~L~~L~ls~N~l~ 431 (948)
+++|+.+++..|.+.
T Consensus 300 L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 300 LPANCIILVPPHLQA 314 (328)
T ss_dssp SCTTCEEECCGGGSC
T ss_pred ccCceEEeCCHHHHH
Confidence 888888888877664
No 273
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=4.7e-32 Score=307.11 Aligned_cols=307 Identities=15% Similarity=0.140 Sum_probs=228.2
Q ss_pred CCEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEc
Q 002238 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEI 146 (948)
Q Consensus 68 ~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 146 (948)
.+++.|+++++.++...+..|.++++|++|+|++|.+++..+ .|.++++|++|+|++|.++++++..|+++++|++|+|
T Consensus 45 ~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124 (390)
T ss_dssp CCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEEC
Confidence 578889999999885544557889999999999999999877 7999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCcc-ccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccccCCCCcccccccceeccCCCC
Q 002238 147 DNNPFSSWEIPQS-LRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNG 225 (948)
Q Consensus 147 s~N~l~~~~~p~~-~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~ 225 (948)
++|+++ .+|.. +.++++|++|++++|++++..+..|. .+++|++|+|++|++++.....+ ..++.|++.++..
T Consensus 125 ~~n~l~--~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~--~l~~L~~L~l~~n~l~~~~~~~l--~~L~~L~l~~n~l 198 (390)
T 3o6n_A 125 ERNDLS--SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQ--ATTSLQNLQLSSNRLTHVDLSLI--PSLFHANVSYNLL 198 (390)
T ss_dssp CSSCCC--CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTS--SCTTCCEEECCSSCCSBCCGGGC--TTCSEEECCSSCC
T ss_pred CCCccC--cCCHHHhcCCCCCcEEECCCCccCccChhhcc--CCCCCCEEECCCCcCCccccccc--cccceeecccccc
Confidence 999999 56665 68899999999999999998888887 89999999999999986533322 3455555554322
Q ss_pred CCccCCCccccccCCCccEEEccCCcccccCCCCCCCCCCcEEeccCCccccccchhhhCCCCCcEEEcccCcccccCCC
Q 002238 226 NAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPE 305 (948)
Q Consensus 226 ~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~ 305 (948)
..+...++|++|++++|.++...... .++|+.|+|++|.+++. ..+..+++|++|+|++|.+++.+|.
T Consensus 199 --------~~~~~~~~L~~L~l~~n~l~~~~~~~--~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~ 266 (390)
T 3o6n_A 199 --------STLAIPIAVEELDASHNSINVVRGPV--NVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYH 266 (390)
T ss_dssp --------SEEECCSSCSEEECCSSCCCEEECCC--CSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESG
T ss_pred --------cccCCCCcceEEECCCCeeeeccccc--cccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChh
Confidence 12334567888888888888654432 47888888888888853 4688888888888888888876553
Q ss_pred -CCCccccccccccCCCCCCCCCCCchhhhhhHHHHHhhCCcchhccccCCCCCCCCccceeecCCceEEEEccCCcccc
Q 002238 306 -FDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTG 384 (948)
Q Consensus 306 -~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~g 384 (948)
+.. +++|+.|+|++|++++
T Consensus 267 ~~~~------------------------------------------------------------l~~L~~L~L~~n~l~~ 286 (390)
T 3o6n_A 267 PFVK------------------------------------------------------------MQRLERLYISNNRLVA 286 (390)
T ss_dssp GGTT------------------------------------------------------------CSSCCEEECCSSCCCE
T ss_pred Hccc------------------------------------------------------------cccCCEEECCCCcCcc
Confidence 223 3456666666666654
Q ss_pred cCCccccCccccceEeCccccccccCCcCCcCCCCCcEEEccCCcccCCCC-CCCcccccccCCCCCCCCc
Q 002238 385 TISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIP-SFKSNAIVNTDGNPDIGKE 454 (948)
Q Consensus 385 ~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~ip-~~~~~~~~~~~gnp~~~~~ 454 (948)
+|..+..+++|++|+|++|+++ .+|..+..+++|++|+|++|+++.... .+.....+.+++||+.|..
T Consensus 287 -~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~L~~L~l~~N~~~~~~ 355 (390)
T 3o6n_A 287 -LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKNLTLSHNDWDCNS 355 (390)
T ss_dssp -EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCCCCTTCCCSEEECCSSCEEHHH
T ss_pred -cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccceeCchhhccCCEEEcCCCCccchh
Confidence 3444555666666666666665 455556666666666666666654322 2344555666666666543
No 274
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=4.1e-32 Score=331.69 Aligned_cols=336 Identities=17% Similarity=0.203 Sum_probs=281.0
Q ss_pred CCEEEEEeCCCCCcC-----------------CCCcccc--CCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEccccc-
Q 002238 68 KRITRIQIGHQNLQG-----------------TLPSNLQ--NLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQ- 126 (948)
Q Consensus 68 ~~v~~l~l~~~~l~~-----------------~~p~~l~--~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~- 126 (948)
.+++.|+|++|+++| .+|+.++ ++++|++|+|++|++.+.+| .|.++++|++|+|++|+
T Consensus 448 ~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~ 527 (876)
T 4ecn_A 448 TKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRG 527 (876)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTT
T ss_pred CCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCC
Confidence 689999999999998 4999988 99999999999999999888 79999999999999998
Q ss_pred ccC-CCCccccCC-------CCCCEEEccCCCCCCCCCCc--cccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEE
Q 002238 127 FTS-VPSDFFTGL-------SSLQSIEIDNNPFSSWEIPQ--SLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILH 196 (948)
Q Consensus 127 l~~-~~~~~~~~l-------~~L~~L~Ls~N~l~~~~~p~--~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~ 196 (948)
+++ .+|..++++ ++|+.|+|++|+++ .+|. .+.++++|+.|+|++|+++ .+| .|+ .+++|+.|+
T Consensus 528 lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~--~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~--~L~~L~~L~ 601 (876)
T 4ecn_A 528 ISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE--EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFG--TNVKLTDLK 601 (876)
T ss_dssp SCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC--BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCC--TTSEESEEE
T ss_pred cccccchHHHHhhhhcccccCCccEEEeeCCcCC--ccCChhhhhcCCCCCEEECCCCCcc-cch-hhc--CCCcceEEE
Confidence 998 667656555 49999999999999 7898 9999999999999999999 778 676 899999999
Q ss_pred cccccccccCCCCccc-cc-ccceeccCCCCCCccCCCccccccCCC--ccEEEccCCcccccCCCCC------CCCCCc
Q 002238 197 LAFNQLIGGLPASFSG-SQ-IQSLWVNGQNGNAKLGGGIDVIQNMTS--LKEIWLHSNAFSGPLPDFS------GVKQLE 266 (948)
Q Consensus 197 Ls~N~l~~~~p~~~~~-~~-l~~l~~~~~~~~~~~~~~~~~l~~l~~--L~~L~Ls~N~l~~~~~~~~------~l~~L~ 266 (948)
|++|+++ .+|..+.. .+ |+.|++.++... ..+..+..++. |+.|+|++|++.+.+|.+. .+.+|+
T Consensus 602 Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~----~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~ 676 (876)
T 4ecn_A 602 LDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK----YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINAS 676 (876)
T ss_dssp CCSSCCS-CCCTTSCEECTTCCEEECCSSCCC----SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEE
T ss_pred CcCCccc-cchHHHhhccccCCEEECcCCCCC----cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcC
Confidence 9999999 88887765 44 777777765433 45566666654 9999999999999877544 456899
Q ss_pred EEeccCCccccccchhh-hCCCCCcEEEcccCcccccCCCCCCc--------cccccccccCCCCCCCCCCCchhhhhhH
Q 002238 267 SLSLRDNFFTGPVPDSL-VKLESLKIVNMTNNLLQGPVPEFDRS--------VSLDMAKGSNNFCLPSPGACDPRLNALL 337 (948)
Q Consensus 267 ~L~L~~N~l~~~~p~~l-~~l~~L~~L~Ls~N~l~g~~p~~~~~--------~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 337 (948)
.|+|++|+++ .+|..+ ..+++|+.|+|++|+++..++.+... .+|..+++.+|.+..+|....
T Consensus 677 ~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~~lp~~l~------- 748 (876)
T 4ecn_A 677 TVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLTSLSDDFR------- 748 (876)
T ss_dssp EEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCCCCCGGGS-------
T ss_pred EEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCCccChHHhccccccccccCCccEEECCCCCCccchHHhh-------
Confidence 9999999999 667665 48999999999999999444444332 278888888776654431100
Q ss_pred HHHHhhCCcchhccccCCCCCCCCccceeecCCceEEEEccCCcccccCCccccCccccceEeCcc------ccccccCC
Q 002238 338 SVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILAD------NNLSGMIP 411 (948)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~g~ip~~~~~l~~L~~L~Ls~------N~l~g~ip 411 (948)
...+++|+.|+|++|++++ +|..++++++|+.|+|++ |++.+.+|
T Consensus 749 ----------------------------~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip 799 (876)
T 4ecn_A 749 ----------------------------ATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWP 799 (876)
T ss_dssp ----------------------------TTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCC
T ss_pred ----------------------------hccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccCh
Confidence 0146789999999999998 899999999999999976 88999999
Q ss_pred cCCcCCCCCcEEEccCCcccCCCCC--CCcccccccCCCCCCC
Q 002238 412 EGLSVLGALKELDVSNNQLYGKIPS--FKSNAIVNTDGNPDIG 452 (948)
Q Consensus 412 ~~l~~l~~L~~L~ls~N~l~g~ip~--~~~~~~~~~~gnp~~~ 452 (948)
..|..+++|+.|+|++|+| +.||. ......+.+++||+..
T Consensus 800 ~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~~~L~~LdLs~N~l~~ 841 (876)
T 4ecn_A 800 TGITTCPSLIQLQIGSNDI-RKVDEKLTPQLYILDIADNPNIS 841 (876)
T ss_dssp TTGGGCSSCCEEECCSSCC-CBCCSCCCSSSCEEECCSCTTCE
T ss_pred HHHhcCCCCCEEECCCCCC-CccCHhhcCCCCEEECCCCCCCc
Confidence 9999999999999999999 78885 3456788999999764
No 275
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=8.3e-33 Score=302.77 Aligned_cols=251 Identities=25% Similarity=0.413 Sum_probs=186.3
Q ss_pred CCcEEEcccccccC--CCCccccCCCCCCEEEccC-CCCCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCC
Q 002238 116 SLEVVMLSNNQFTS--VPSDFFTGLSSLQSIEIDN-NPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGL 192 (948)
Q Consensus 116 ~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~Ls~-N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L 192 (948)
++++|+|++|.+++ ..|..|.++++|++|+|++ |.+.+ .+|..+.++++|++|+|++|++++.+|..|. .+++|
T Consensus 51 ~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~-~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~--~l~~L 127 (313)
T 1ogq_A 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVG-PIPPAIAKLTQLHYLYITHTNVSGAIPDFLS--QIKTL 127 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEES-CCCGGGGGCTTCSEEEEEEECCEEECCGGGG--GCTTC
T ss_pred eEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccc-cCChhHhcCCCCCEEECcCCeeCCcCCHHHh--CCCCC
Confidence 34444444444444 4444455555555555552 55544 4555555555555555555566556666555 56666
Q ss_pred cEEEcccccccccCCCCcccccccceeccCCCCCCccCCCccccccCCCccEEEccCCcccccCC-CCCCCC-CCcEEec
Q 002238 193 TILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVK-QLESLSL 270 (948)
Q Consensus 193 ~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~-~L~~L~L 270 (948)
++|+|++|++++.+|..+ .++++|++|+|++|++++.+| .+..++ +|+.|+|
T Consensus 128 ~~L~Ls~N~l~~~~p~~~--------------------------~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L 181 (313)
T 1ogq_A 128 VTLDFSYNALSGTLPPSI--------------------------SSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTI 181 (313)
T ss_dssp CEEECCSSEEESCCCGGG--------------------------GGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEEC
T ss_pred CEEeCCCCccCCcCChHH--------------------------hcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEEC
Confidence 666666666666666543 256677777777777766555 466666 8999999
Q ss_pred cCCccccccchhhhCCCCCcEEEcccCcccccCCCCCCccccccccccCCCCCCCCCCCchhhhhhHHHHHhhCCcchhc
Q 002238 271 RDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFA 350 (948)
Q Consensus 271 ~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 350 (948)
++|++++.+|..+..++ |+.|+|++|++++.+|.
T Consensus 182 ~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~--------------------------------------------- 215 (313)
T 1ogq_A 182 SRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASV--------------------------------------------- 215 (313)
T ss_dssp CSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGG---------------------------------------------
T ss_pred cCCeeeccCChHHhCCc-ccEEECcCCcccCcCCH---------------------------------------------
Confidence 99999999999999997 99999999999987664
Q ss_pred cccCCCCCCCCccceeecCCceEEEEccCCcccccCCccccCccccceEeCccccccccCCcCCcCCCCCcEEEccCCcc
Q 002238 351 ENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQL 430 (948)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~ls~N~l 430 (948)
.+..+++|+.|+|++|.+++.+|. +..+++|++|+|++|+|+|.+|..+..+++|++|+|++|+|
T Consensus 216 --------------~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 280 (313)
T 1ogq_A 216 --------------LFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNL 280 (313)
T ss_dssp --------------GCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEE
T ss_pred --------------HHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcc
Confidence 122445899999999999988777 88999999999999999999999999999999999999999
Q ss_pred cCCCCCC---CcccccccCCCCCCCCccC
Q 002238 431 YGKIPSF---KSNAIVNTDGNPDIGKEKS 456 (948)
Q Consensus 431 ~g~ip~~---~~~~~~~~~gnp~~~~~~~ 456 (948)
+|.+|.. .....+.+.+||+.|..|.
T Consensus 281 ~~~ip~~~~l~~L~~l~l~~N~~lc~~p~ 309 (313)
T 1ogq_A 281 CGEIPQGGNLQRFDVSAYANNKCLCGSPL 309 (313)
T ss_dssp EEECCCSTTGGGSCGGGTCSSSEEESTTS
T ss_pred cccCCCCccccccChHHhcCCCCccCCCC
Confidence 9999974 4466788999999987654
No 276
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.98 E-value=9.9e-32 Score=323.16 Aligned_cols=362 Identities=18% Similarity=0.166 Sum_probs=251.6
Q ss_pred EEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEccCC
Q 002238 71 TRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNN 149 (948)
Q Consensus 71 ~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 149 (948)
..++.++++++ .+|..+. ++|++|+|++|.+++.++ .|.++++|++|+|++|.+++++|..|.++++|++|+|++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n 90 (606)
T 3vq2_A 14 ITYQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGN 90 (606)
T ss_dssp TEEECTTSCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTC
T ss_pred CceEccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCC
Confidence 35788888998 7777665 799999999999999887 7999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccc-cCCCCccc-ccccceeccCCCCCC
Q 002238 150 PFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIG-GLPASFSG-SQIQSLWVNGQNGNA 227 (948)
Q Consensus 150 ~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~-~~l~~l~~~~~~~~~ 227 (948)
+++. ..|..+.++++|++|++++|++++..+..++ .+++|++|+|++|++++ .+|..|.. .+|+.|++.++....
T Consensus 91 ~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~--~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~ 167 (606)
T 3vq2_A 91 PIQS-FSPGSFSGLTSLENLVAVETKLASLESFPIG--QLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQT 167 (606)
T ss_dssp CCCC-CCTTSSTTCTTCCEEECTTSCCCCSSSSCCT--TCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCE
T ss_pred cccc-cChhhcCCcccCCEEEccCCccccccccccC--CCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCccee
Confidence 9996 5589999999999999999999988888887 99999999999999986 56888865 567777776654332
Q ss_pred ccCCCcc-------------------------------------------------------------------------
Q 002238 228 KLGGGID------------------------------------------------------------------------- 234 (948)
Q Consensus 228 ~~~~~~~------------------------------------------------------------------------- 234 (948)
.......
T Consensus 168 ~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l 247 (606)
T 3vq2_A 168 ITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNL 247 (606)
T ss_dssp ECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCC
T ss_pred cChhhhhhhhccccccceeeccCCCcceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcc
Confidence 2111000
Q ss_pred ------------------------------------------------------ccccCCCccEEEccCCcccccCCC--
Q 002238 235 ------------------------------------------------------VIQNMTSLKEIWLHSNAFSGPLPD-- 258 (948)
Q Consensus 235 ------------------------------------------------------~l~~l~~L~~L~Ls~N~l~~~~~~-- 258 (948)
.+..+++|+.|++++|.+ +.+|.
T Consensus 248 ~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l-~~lp~~~ 326 (606)
T 3vq2_A 248 EIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQL-KQFPTLD 326 (606)
T ss_dssp SCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCC-SSCCCCC
T ss_pred cccChHHhhhhhhccHhheeccccccccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccC-cccccCC
Confidence 012223444444444444 22222
Q ss_pred -------------------CCCCCCCcEEeccCCccccc--cchhhhCCCCCcEEEcccCcccccCCCCCCccccccccc
Q 002238 259 -------------------FSGVKQLESLSLRDNFFTGP--VPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKG 317 (948)
Q Consensus 259 -------------------~~~l~~L~~L~L~~N~l~~~--~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~ 317 (948)
+..+++|+.|+|++|++++. +|..+..+++|+.|+|++|.+++..+.+..+.+|..++.
T Consensus 327 l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l 406 (606)
T 3vq2_A 327 LPFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIMSANFMGLEELQHLDF 406 (606)
T ss_dssp CSSCCEEEEESCSSCEECCCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEEECCCCTTCTTCCEEEC
T ss_pred CCccceeeccCCcCccchhhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccccchhhccCCCCCCeeEC
Confidence 23455666667777777654 367777777777777777777766656667777777777
Q ss_pred cCCCCCCCCC-CCchhhhhhHHHHHhhCCcchhccccCCCCCCCCccceeecCCceEEEEccCCcccc-cCCccccCccc
Q 002238 318 SNNFCLPSPG-ACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTG-TISPEFASFKS 395 (948)
Q Consensus 318 ~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~g-~ip~~~~~l~~ 395 (948)
.+|.....+. .....+..+. ..+..++.........+..+++|+.|++++|.+.+ .+|..|+++++
T Consensus 407 ~~n~l~~~~~~~~~~~l~~L~------------~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~ 474 (606)
T 3vq2_A 407 QHSTLKRVTEFSAFLSLEKLL------------YLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTN 474 (606)
T ss_dssp TTSEEESTTTTTTTTTCTTCC------------EEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTT
T ss_pred CCCccCCccChhhhhccccCC------------EEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCC
Confidence 6665444322 1111111111 01111111111111224455677777777777776 46777777777
Q ss_pred cceEeCccccccccCCcCCcCCCCCcEEEccCCcccCCCCC----CCcccccccCCCCCC
Q 002238 396 LQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPS----FKSNAIVNTDGNPDI 451 (948)
Q Consensus 396 L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~ip~----~~~~~~~~~~gnp~~ 451 (948)
|+.|+|++|++++..|..+..+++|++|+|++|++++.+|. +.....+.+++|...
T Consensus 475 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 534 (606)
T 3vq2_A 475 LTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE 534 (606)
T ss_dssp CCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC
T ss_pred CCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc
Confidence 77777777777777777777777777777777777766553 344556677777644
No 277
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.97 E-value=1.6e-31 Score=311.39 Aligned_cols=300 Identities=17% Similarity=0.198 Sum_probs=259.6
Q ss_pred CCEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEc
Q 002238 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEI 146 (948)
Q Consensus 68 ~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 146 (948)
.+++.|+|++|.+++..|..|.++++|++|+|++|.|++.++ .|.++++|++|+|++|.++++++..|..+++|+.|+|
T Consensus 56 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 135 (477)
T 2id5_A 56 PHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEV 135 (477)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEE
T ss_pred CCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEEC
Confidence 589999999999999889999999999999999999998877 5889999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccccCCCCcccccccceeccCCCCC
Q 002238 147 DNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGN 226 (948)
Q Consensus 147 s~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~ 226 (948)
++|+++. ..|..|.++++|+.|+|++|++++..+..|. .+++|+.|+|++|++.+..+..|
T Consensus 136 ~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~l~~L~~L~l~~n~i~~~~~~~~---------------- 196 (477)
T 2id5_A 136 GDNDLVY-ISHRAFSGLNSLEQLTLEKCNLTSIPTEALS--HLHGLIVLRLRHLNINAIRDYSF---------------- 196 (477)
T ss_dssp CCTTCCE-ECTTSSTTCTTCCEEEEESCCCSSCCHHHHT--TCTTCCEEEEESCCCCEECTTCS----------------
T ss_pred CCCccce-eChhhccCCCCCCEEECCCCcCcccChhHhc--ccCCCcEEeCCCCcCcEeChhhc----------------
Confidence 9999996 4577899999999999999999988777787 89999999999999997766554
Q ss_pred CccCCCccccccCCCccEEEccCCcccccCC-CCCCCCCCcEEeccCCccccccchhhhCCCCCcEEEcccCcccccCCC
Q 002238 227 AKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPE 305 (948)
Q Consensus 227 ~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~ 305 (948)
.++++|+.|+|++|.+.+.++ ......+|+.|+|++|++++..+..+.++++|+.|+|++|++++..+.
T Consensus 197 ----------~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 266 (477)
T 2id5_A 197 ----------KRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGS 266 (477)
T ss_dssp ----------CSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTT
T ss_pred ----------ccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChh
Confidence 478999999999998887665 455567999999999999965557899999999999999999876553
Q ss_pred CCCccccccccccCCCCCCCCCCCchhhhhhHHHHHhhCCcchhccccCCCCCCCCccceeecCCceEEEEccCCccccc
Q 002238 306 FDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGT 385 (948)
Q Consensus 306 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~g~ 385 (948)
.+..+++|+.|+|++|++++.
T Consensus 267 -----------------------------------------------------------~~~~l~~L~~L~L~~n~l~~~ 287 (477)
T 2id5_A 267 -----------------------------------------------------------MLHELLRLQEIQLVGGQLAVV 287 (477)
T ss_dssp -----------------------------------------------------------SCTTCTTCCEEECCSSCCSEE
T ss_pred -----------------------------------------------------------hccccccCCEEECCCCccceE
Confidence 122345899999999999999
Q ss_pred CCccccCccccceEeCccccccccCCcCCcCCCCCcEEEccCCcccCCCCC---CCcccccccCCCCCCCCcc
Q 002238 386 ISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPS---FKSNAIVNTDGNPDIGKEK 455 (948)
Q Consensus 386 ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~ip~---~~~~~~~~~~gnp~~~~~~ 455 (948)
.|..|.++++|+.|+|++|+|++..+..|..+++|++|+|++|++.+..+- +.......+.++...|..|
T Consensus 288 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p 360 (477)
T 2id5_A 288 EPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATP 360 (477)
T ss_dssp CTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEES
T ss_pred CHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccchHhHHhhhhccccCccCceeCCc
Confidence 999999999999999999999987778899999999999999999875431 0112224456666666544
No 278
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.97 E-value=1.1e-31 Score=316.43 Aligned_cols=145 Identities=17% Similarity=0.234 Sum_probs=124.6
Q ss_pred EEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEccCC
Q 002238 71 TRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNN 149 (948)
Q Consensus 71 ~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 149 (948)
+.|++++|+++ .+|..+. ++|++|+|++|.|++.+| .|.++++|++|+|++|++++++|..|+++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 46899999999 6888777 899999999999999887 7999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCCCCCEEEccCccccc-cCCCCCCCCCCCCCcEEEcccccccccCCCCcccccccceeccCCC
Q 002238 150 PFSSWEIPQSLRNASGLQNFSANSANITG-QIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQN 224 (948)
Q Consensus 150 ~l~~~~~p~~~~~l~~L~~L~l~~n~l~~-~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~ 224 (948)
+++ .+|.. .+++|++|+|++|++++ .+|..|+ .+++|++|+|++|++++.....+...+++.|++.++.
T Consensus 80 ~l~--~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~--~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~l~~n~ 149 (520)
T 2z7x_B 80 KLV--KISCH--PTVNLKHLDLSFNAFDALPICKEFG--NMSQLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGE 149 (520)
T ss_dssp CCC--EEECC--CCCCCSEEECCSSCCSSCCCCGGGG--GCTTCCEEEEEESSCCGGGGGGGTTSCEEEEEEEECT
T ss_pred cee--ecCcc--ccCCccEEeccCCccccccchhhhc--cCCcceEEEecCcccchhhccccccceeeEEEeeccc
Confidence 999 67777 89999999999999998 5788887 8999999999999998743222221222677666544
No 279
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.97 E-value=2e-31 Score=318.21 Aligned_cols=367 Identities=20% Similarity=0.220 Sum_probs=241.5
Q ss_pred EEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEccCCC
Q 002238 72 RIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNP 150 (948)
Q Consensus 72 ~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 150 (948)
.++.++.+++ .+|..+. ++|++|+|++|.|++..+ .|.++++|++|+|++|+++++++..|+++++|++|+|++|+
T Consensus 11 ~~~c~~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~ 87 (570)
T 2z63_A 11 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87 (570)
T ss_dssp EEECCSSCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred EEEeCCCCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCc
Confidence 4666777777 6777654 579999999999999777 79999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccc-cCCCCccc-ccccceeccCCCCCCc
Q 002238 151 FSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIG-GLPASFSG-SQIQSLWVNGQNGNAK 228 (948)
Q Consensus 151 l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~-~~l~~l~~~~~~~~~~ 228 (948)
++. ..|..|.++++|++|++++|++++..+..++ .+++|++|+|++|++++ .+|..|.. .+|+.|++.++ ..
T Consensus 88 l~~-~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~--~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n---~l 161 (570)
T 2z63_A 88 IQS-LALGAFSGLSSLQKLVAVETNLASLENFPIG--HLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSN---KI 161 (570)
T ss_dssp CCE-ECTTTTTTCTTCCEEECTTSCCCCSTTCSCT--TCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTS---CC
T ss_pred CCc-cCHhhhcCccccccccccccccccCCCcccc--ccccccEEecCCCccceecChhhhcccCCCCEEeCcCC---cc
Confidence 995 4468899999999999999999987776776 89999999999999987 46888864 45666666544 44
Q ss_pred cCCCccccccCCCc----cEEEccCCcccccCCC----------------------------------------------
Q 002238 229 LGGGIDVIQNMTSL----KEIWLHSNAFSGPLPD---------------------------------------------- 258 (948)
Q Consensus 229 ~~~~~~~l~~l~~L----~~L~Ls~N~l~~~~~~---------------------------------------------- 258 (948)
....+..+..+++| ..|++++|.+++..+.
T Consensus 162 ~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~ 241 (570)
T 2z63_A 162 QSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEG 241 (570)
T ss_dssp CEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCS
T ss_pred ceecHHHccchhccchhhhhcccCCCCceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCch
Confidence 44444556666666 6777777776654432
Q ss_pred ------------------------------------CCCCCCCcEEeccCCccccccchhhhCCCCCcEEEcccCccccc
Q 002238 259 ------------------------------------FSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGP 302 (948)
Q Consensus 259 ------------------------------------~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ 302 (948)
+..+++|+.|++++|.++ .+|..+..+ +|+.|++++|.+. .
T Consensus 242 ~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~ 318 (570)
T 2z63_A 242 NLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-Q 318 (570)
T ss_dssp SCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-S
T ss_pred hhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-c
Confidence 333466666777776666 466555555 5555555555554 2
Q ss_pred CCC--C-------------------CCccccccccccCCCCCCCCCCCchhhhhhHHHHHh--------------hCCcc
Q 002238 303 VPE--F-------------------DRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKL--------------MGYPQ 347 (948)
Q Consensus 303 ~p~--~-------------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--------------~~~~~ 347 (948)
+|. + ..+.+|..++..+|...... ........+..+..+ .....
T Consensus 319 l~~~~l~~L~~L~l~~n~~~~~~~~~~~~~L~~L~l~~n~l~~~~-~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~ 397 (570)
T 2z63_A 319 FPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKG-CCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQ 397 (570)
T ss_dssp CCBCBCSSCCEEEEESCBSCCBCCCCBCTTCCEEECCSSCCBEEE-EEEHHHHTCSCCCEEECCSCSEEEEEEEEETCTT
T ss_pred cCcccccccCEEeCcCCccccccccccCCCCCEEeCcCCccCccc-cccccccccCccCEEECCCCccccccccccccCC
Confidence 221 1 22333444444444322110 000000000000000 00000
Q ss_pred hhccccCCCCCCCC-ccceeecCCceEEEEccCCcccccCCccccCccccceEeCcccccc-ccCCcCCcCCCCCcEEEc
Q 002238 348 RFAENWKGNDPCSD-WIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLS-GMIPEGLSVLGALKELDV 425 (948)
Q Consensus 348 ~~~~~~~~~~~~~~-~~~~~~~~~~L~~L~ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~-g~ip~~l~~l~~L~~L~l 425 (948)
-...+..++..... ....+..+++|+.|++++|.+.+.+|..|..+++|++|+|++|+++ +.+|..+..+++|++|+|
T Consensus 398 L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l 477 (570)
T 2z63_A 398 LEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDL 477 (570)
T ss_dssp CCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEEC
T ss_pred CCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEEC
Confidence 00001111100000 0012345667778888888887777777788888888888888876 567777888888888888
Q ss_pred cCCcccCCCCC----CCcccccccCCCCCC
Q 002238 426 SNNQLYGKIPS----FKSNAIVNTDGNPDI 451 (948)
Q Consensus 426 s~N~l~g~ip~----~~~~~~~~~~gnp~~ 451 (948)
++|++++.+|. +.....+.+++|...
T Consensus 478 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 507 (570)
T 2z63_A 478 SQCQLEQLSPTAFNSLSSLQVLNMASNQLK 507 (570)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECCSSCCS
T ss_pred CCCccccCChhhhhcccCCCEEeCCCCcCC
Confidence 88888776553 344566777777544
No 280
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.97 E-value=2.5e-30 Score=307.61 Aligned_cols=338 Identities=19% Similarity=0.187 Sum_probs=262.6
Q ss_pred EEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEccCC
Q 002238 71 TRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNN 149 (948)
Q Consensus 71 ~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 149 (948)
+.++++++++++ +|..+. ++|++|+|++|.|++.++ .|.++++|++|+|++|+|++++|+.|.++++|++|+|++|
T Consensus 34 ~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 110 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHN 110 (562)
T ss_dssp CEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCC
Confidence 789999999994 887665 899999999999999887 7999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCCCCCEEEccCcccccc-CCCCCCCCCCCCCcEEEcccccccccCCCCcccccccceeccCCCCCCc
Q 002238 150 PFSSWEIPQSLRNASGLQNFSANSANITGQ-IPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAK 228 (948)
Q Consensus 150 ~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~-~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~~ 228 (948)
+++ .+|.. .+++|++|++++|++++. +|..|+ .+++|++|+|++|++++.....+...+++.|++.++....
T Consensus 111 ~l~--~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~--~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~L~~n~l~~- 183 (562)
T 3a79_B 111 RLQ--NISCC--PMASLRHLDLSFNDFDVLPVCKEFG--NLTKLTFLGLSAAKFRQLDLLPVAHLHLSCILLDLVSYHI- 183 (562)
T ss_dssp CCC--EECSC--CCTTCSEEECCSSCCSBCCCCGGGG--GCTTCCEEEEECSBCCTTTTGGGTTSCEEEEEEEESSCCC-
T ss_pred cCC--ccCcc--ccccCCEEECCCCCccccCchHhhc--ccCcccEEecCCCccccCchhhhhhceeeEEEeecccccc-
Confidence 999 67877 899999999999999974 567887 8999999999999998643333322233667666544300
Q ss_pred cCCCcc--------------------------ccccCCCccEEEccCCcc-----cccCC--------------------
Q 002238 229 LGGGID--------------------------VIQNMTSLKEIWLHSNAF-----SGPLP-------------------- 257 (948)
Q Consensus 229 ~~~~~~--------------------------~l~~l~~L~~L~Ls~N~l-----~~~~~-------------------- 257 (948)
.+..+. .+.++++|+.|++++|+. .+.++
T Consensus 184 ~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~ 263 (562)
T 3a79_B 184 KGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTW 263 (562)
T ss_dssp CSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECH
T ss_pred cccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcH
Confidence 111222 233566777787777741 11000
Q ss_pred -------CCCCCCCCcEEeccCCccccccchhh-----------------------------------------------
Q 002238 258 -------DFSGVKQLESLSLRDNFFTGPVPDSL----------------------------------------------- 283 (948)
Q Consensus 258 -------~~~~l~~L~~L~L~~N~l~~~~p~~l----------------------------------------------- 283 (948)
......+|++|++++|.++|.+|..+
T Consensus 264 ~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~ 343 (562)
T 3a79_B 264 KCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPF 343 (562)
T ss_dssp HHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCC
T ss_pred HHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCc
Confidence 01112388999999999998888765
Q ss_pred ------hCCCCCcEEEcccCcccccCCC-CCCccccccccccCCCCCCCCCCCchhhhhhHHHHHhhCCcchhccccCCC
Q 002238 284 ------VKLESLKIVNMTNNLLQGPVPE-FDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGN 356 (948)
Q Consensus 284 ------~~l~~L~~L~Ls~N~l~g~~p~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 356 (948)
..+++|++|+|++|++++.+|. +..+.+|+.++..+|....++. +
T Consensus 344 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-----------~----------------- 395 (562)
T 3a79_B 344 IHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFK-----------V----------------- 395 (562)
T ss_dssp CCCCCCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTH-----------H-----------------
T ss_pred ccccCccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCccc-----------c-----------------
Confidence 6789999999999999997664 7788888888888876543320 0
Q ss_pred CCCCCccceeecCCceEEEEccCCcccccCCcc-ccCccccceEeCccccccccCCcCCcCCCCCcEEEccCCcccCCCC
Q 002238 357 DPCSDWIGVTCTKGNITVINFQKMNLTGTISPE-FASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIP 435 (948)
Q Consensus 357 ~~~~~~~~~~~~~~~L~~L~ls~n~l~g~ip~~-~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~ip 435 (948)
...+..+++|+.|+|++|.+++.+|.. +..+++|++|+|++|++++.+|..+. ++|++|+|++|+|+. +|
T Consensus 396 ------~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~~-ip 466 (562)
T 3a79_B 396 ------ALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMS-IP 466 (562)
T ss_dssp ------HHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCCC-CC
T ss_pred ------hhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCcc-cC
Confidence 012345679999999999999966664 88899999999999999998888765 799999999999984 54
Q ss_pred C----CCcccccccCCCCCCCCccC
Q 002238 436 S----FKSNAIVNTDGNPDIGKEKS 456 (948)
Q Consensus 436 ~----~~~~~~~~~~gnp~~~~~~~ 456 (948)
. +.....+.+++|... ..+.
T Consensus 467 ~~~~~l~~L~~L~L~~N~l~-~l~~ 490 (562)
T 3a79_B 467 KDVTHLQALQELNVASNQLK-SVPD 490 (562)
T ss_dssp TTTTSSCCCSEEECCSSCCC-CCCT
T ss_pred hhhcCCCCCCEEECCCCCCC-CCCH
Confidence 3 345677889999766 3443
No 281
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.97 E-value=4.8e-31 Score=313.29 Aligned_cols=342 Identities=17% Similarity=0.173 Sum_probs=268.8
Q ss_pred CCEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCCC-cCCCCCCcEEEcccccccCC-CCccccCCCCCCEEE
Q 002238 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLPS-LNGLASLEVVMLSNNQFTSV-PSDFFTGLSSLQSIE 145 (948)
Q Consensus 68 ~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~ 145 (948)
.+++.|+|++|++++..|..|.++++|++|+|++|.+++.+|. |.++++|++|+|++|.++++ .|..|+++++|++|+
T Consensus 50 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~ 129 (549)
T 2z81_A 50 ANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLR 129 (549)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEE
T ss_pred CcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEE
Confidence 5899999999999988889999999999999999999998884 99999999999999999975 456799999999999
Q ss_pred ccCCCCCCCCCC-ccccCCCCCCEEEccCccccccCCCCCCC----------------------CCCCCCcEEEcccccc
Q 002238 146 IDNNPFSSWEIP-QSLRNASGLQNFSANSANITGQIPSFFGP----------------------DEFPGLTILHLAFNQL 202 (948)
Q Consensus 146 Ls~N~l~~~~~p-~~~~~l~~L~~L~l~~n~l~~~~p~~~~~----------------------~~l~~L~~L~Ls~N~l 202 (948)
|++|++.+ .+| ..+.++++|++|++++|++++.+|..++. ..+++|++|+|++|++
T Consensus 130 L~~n~~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l 208 (549)
T 2z81_A 130 IGNVETFS-EIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNL 208 (549)
T ss_dssp EEESSSCC-EECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBC
T ss_pred CCCCcccc-ccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCcc
Confidence 99998544 565 68999999999999999999988887751 1367888888888888
Q ss_pred cccC--CCCcc--ccc----------------------------------------------------------------
Q 002238 203 IGGL--PASFS--GSQ---------------------------------------------------------------- 214 (948)
Q Consensus 203 ~~~~--p~~~~--~~~---------------------------------------------------------------- 214 (948)
++.. |..+. ...
T Consensus 209 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l 288 (549)
T 2z81_A 209 ARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTI 288 (549)
T ss_dssp TTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEE
T ss_pred ccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccc
Confidence 8642 11100 011
Q ss_pred -----------------------ccceeccCCCCCCccCCCcccc-ccCCCccEEEccCCcccccCC----CCCCCCCCc
Q 002238 215 -----------------------IQSLWVNGQNGNAKLGGGIDVI-QNMTSLKEIWLHSNAFSGPLP----DFSGVKQLE 266 (948)
Q Consensus 215 -----------------------l~~l~~~~~~~~~~~~~~~~~l-~~l~~L~~L~Ls~N~l~~~~~----~~~~l~~L~ 266 (948)
++.|++.+ +. ....+..+ .++++|++|+|++|++++.++ .+..+++|+
T Consensus 289 ~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~---n~-l~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~ 364 (549)
T 2z81_A 289 RRLHIPQFYLFYDLSTVYSLLEKVKRITVEN---SK-VFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQ 364 (549)
T ss_dssp ESCBCSCGGGSCCCCHHHHHSTTCCEEEEES---SC-CCCCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCC
T ss_pred cccccchhhhcccchhhhhhcccceEEEecc---Cc-cccCCHHHHhcCccccEEEccCCccccccccchhhhhccccCc
Confidence 11111111 11 12234333 579999999999999998643 367899999
Q ss_pred EEeccCCccccccc--hhhhCCCCCcEEEcccCcccccCCCCCCccccccccccCCCCCCCCCCCchhhhhhHHHHHhhC
Q 002238 267 SLSLRDNFFTGPVP--DSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMG 344 (948)
Q Consensus 267 ~L~L~~N~l~~~~p--~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 344 (948)
.|+|++|++++..+ ..+..+++|++|+|++|++++.++.+..+.+|+.++..+|....++...+..+..+
T Consensus 365 ~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~~~~L~~L~Ls~N~l~~l~~~~~~~L~~L-------- 436 (549)
T 2z81_A 365 TLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFHPMPDSCQWPEKMRFLNLSSTGIRVVKTCIPQTLEVL-------- 436 (549)
T ss_dssp EEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCCCCCSCCCCCTTCCEEECTTSCCSCCCTTSCTTCSEE--------
T ss_pred EEEccCCcccccccchhhhhcCCCCCEEECCCCCCccCChhhcccccccEEECCCCCcccccchhcCCceEE--------
Confidence 99999999995433 56899999999999999999665567788889999999888776665443322211
Q ss_pred CcchhccccCCCCCCCCccceeecCCceEEEEccCCcccccCCccccCccccceEeCccccccccCCcCCcCCCCCcEEE
Q 002238 345 YPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELD 424 (948)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~ 424 (948)
+..++.- .+....+++|+.|+|++|+++ .+|. .+.+++|++|+|++|+|++.+|..+..+++|++|+
T Consensus 437 -------~Ls~N~l----~~~~~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 503 (549)
T 2z81_A 437 -------DVSNNNL----DSFSLFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIW 503 (549)
T ss_dssp -------ECCSSCC----SCCCCCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEE
T ss_pred -------ECCCCCh----hhhcccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEE
Confidence 1122211 112346789999999999998 6776 57899999999999999999899999999999999
Q ss_pred ccCCcccCCCC
Q 002238 425 VSNNQLYGKIP 435 (948)
Q Consensus 425 ls~N~l~g~ip 435 (948)
+++|++++..|
T Consensus 504 l~~N~~~~~~~ 514 (549)
T 2z81_A 504 LHTNPWDCSCP 514 (549)
T ss_dssp CCSSCBCCCHH
T ss_pred ecCCCccCCCc
Confidence 99999999877
No 282
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.97 E-value=2.1e-30 Score=309.83 Aligned_cols=306 Identities=18% Similarity=0.221 Sum_probs=257.3
Q ss_pred CCEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEc
Q 002238 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEI 146 (948)
Q Consensus 68 ~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 146 (948)
.+++.|+|++|.+++..|..|+++++|++|+|++|.|++.+| .|.++++|++|+|++|.|+++++..|+++++|++|+|
T Consensus 75 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 154 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 154 (597)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEe
Confidence 579999999999998888899999999999999999999888 5799999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccccCCCCcccccccceeccCCCCC
Q 002238 147 DNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGN 226 (948)
Q Consensus 147 s~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~ 226 (948)
++|.+++ ..|..+.++++|++|+|++|.+++... + .+++|+.|++++|.+++.... ..++.|++.++...
T Consensus 155 s~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~---~--~l~~L~~L~l~~n~l~~l~~~----~~L~~L~ls~n~l~ 224 (597)
T 3oja_B 155 SNNNLER-IEDDTFQATTSLQNLQLSSNRLTHVDL---S--LIPSLFHANVSYNLLSTLAIP----IAVEELDASHNSIN 224 (597)
T ss_dssp CSSCCCB-CCTTTTTTCTTCCEEECTTSCCSBCCG---G--GCTTCSEEECCSSCCSEEECC----TTCSEEECCSSCCC
T ss_pred eCCcCCC-CChhhhhcCCcCcEEECcCCCCCCcCh---h--hhhhhhhhhcccCccccccCC----chhheeeccCCccc
Confidence 9999996 567789999999999999999997642 2 678999999999999864221 35777877766544
Q ss_pred CccCCCccccccCCCccEEEccCCcccccCCCCCCCCCCcEEeccCCccccccchhhhCCCCCcEEEcccCcccccCCCC
Q 002238 227 AKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEF 306 (948)
Q Consensus 227 ~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~ 306 (948)
..... ..++|+.|+|++|.+++. +.+..+++|+.|+|++|.+++.+|..|..+++|+.|+|++|.+++..+.+
T Consensus 225 ~~~~~------~~~~L~~L~L~~n~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~ 297 (597)
T 3oja_B 225 VVRGP------VNVELTILKLQHNNLTDT-AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYG 297 (597)
T ss_dssp EEECS------CCSCCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCEEECSS
T ss_pred ccccc------cCCCCCEEECCCCCCCCC-hhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCCCCccc
Confidence 43322 236899999999999974 66888999999999999999999999999999999999999998743321
Q ss_pred CCccccccccccCCCCCCCCCCCchhhhhhHHHHHhhCCcchhccccCCCCCCCCccceeecCCceEEEEccCCcccccC
Q 002238 307 DRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTI 386 (948)
Q Consensus 307 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~g~i 386 (948)
..+++|+.|+|++|.+. .+
T Consensus 298 ------------------------------------------------------------~~l~~L~~L~Ls~N~l~-~i 316 (597)
T 3oja_B 298 ------------------------------------------------------------QPIPTLKVLDLSHNHLL-HV 316 (597)
T ss_dssp ------------------------------------------------------------SCCTTCCEEECCSSCCC-CC
T ss_pred ------------------------------------------------------------ccCCCCcEEECCCCCCC-cc
Confidence 12458999999999999 68
Q ss_pred CccccCccccceEeCccccccccCCcCCcCCCCCcEEEccCCcccCCCCC--CCcccccccCCCCCCCCc
Q 002238 387 SPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPS--FKSNAIVNTDGNPDIGKE 454 (948)
Q Consensus 387 p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~ip~--~~~~~~~~~~gnp~~~~~ 454 (948)
|..++.+++|+.|+|++|+|++. | +..+++|+.|+|++|++++..+. +.......+.+++..|..
T Consensus 317 ~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 383 (597)
T 3oja_B 317 ERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNSLRALFRNVARPAVDDADQHCKI 383 (597)
T ss_dssp GGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHHHHHHTTTCCTTTBCCCCCCCCT
T ss_pred CcccccCCCCCEEECCCCCCCCc-C--hhhcCCCCEEEeeCCCCCChhHHHHHHHHhhhccccccccCCc
Confidence 88899999999999999999854 3 77889999999999999874221 223334445677766654
No 283
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.97 E-value=6e-30 Score=296.81 Aligned_cols=321 Identities=19% Similarity=0.281 Sum_probs=175.3
Q ss_pred CEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCCCcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEccC
Q 002238 69 RITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDN 148 (948)
Q Consensus 69 ~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 148 (948)
+++.|++.++++.. +| .+..+++|++|+|++|.+++.++ +.++++|++|+|++|.++++++ ++++++|++|+|++
T Consensus 47 ~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~ 121 (466)
T 1o6v_A 47 QVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP-LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFN 121 (466)
T ss_dssp TCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred cccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchh-hhccccCCEEECCCCccccChh--hcCCCCCCEEECCC
Confidence 45555555555542 33 24445555555555555555444 5555555555555555555444 55555555555555
Q ss_pred CCCCCCCCCccccCCCCCCEEEccCccccccCCCCCC-------------------CCCCCCCcEEEcccccccccCCCC
Q 002238 149 NPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFG-------------------PDEFPGLTILHLAFNQLIGGLPAS 209 (948)
Q Consensus 149 N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~-------------------~~~l~~L~~L~Ls~N~l~~~~p~~ 209 (948)
|+++. ++. +.++++|++|++++|.+++. + .+. ...+++|++|++++|++++. +.
T Consensus 122 n~l~~--~~~-~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~- 194 (466)
T 1o6v_A 122 NQITD--IDP-LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDI-SV- 194 (466)
T ss_dssp SCCCC--CGG-GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCC-GG-
T ss_pred CCCCC--ChH-HcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCC-hh-
Confidence 55553 222 45555555555555555432 1 122 01455555555555555432 11
Q ss_pred ccc-ccccceeccCCCCCCccCCCccccccCCCccEEEccCCcccccCCCCCCCCCCcEEeccCCccccccchhhhCCCC
Q 002238 210 FSG-SQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLES 288 (948)
Q Consensus 210 ~~~-~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 288 (948)
+.. .+|+.|++.++.. .+..+ ++.+++|++|+|++|++++. +.+..+++|+.|++++|.+++..| +..+++
T Consensus 195 l~~l~~L~~L~l~~n~l---~~~~~--~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~ 266 (466)
T 1o6v_A 195 LAKLTNLESLIATNNQI---SDITP--LGILTNLDELSLNGNQLKDI-GTLASLTNLTDLDLANNQISNLAP--LSGLTK 266 (466)
T ss_dssp GGGCTTCSEEECCSSCC---CCCGG--GGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTT
T ss_pred hccCCCCCEEEecCCcc---ccccc--ccccCCCCEEECCCCCcccc-hhhhcCCCCCEEECCCCccccchh--hhcCCC
Confidence 211 2333333332221 11111 34455555555555555432 334445555555555555553333 455555
Q ss_pred CcEEEcccCcccccCCCCCCccccccccccCCCCCCCCCCCchhhhhhHHHHHhhCCcchhccccCCCCCCCCccceeec
Q 002238 289 LKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCT 368 (948)
Q Consensus 289 L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (948)
|+.|++++|++++..+ +..+..|..++..+|..... ..+..
T Consensus 267 L~~L~l~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~--------------------------------------~~~~~ 307 (466)
T 1o6v_A 267 LTELKLGANQISNISP-LAGLTALTNLELNENQLEDI--------------------------------------SPISN 307 (466)
T ss_dssp CSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCSCC--------------------------------------GGGGG
T ss_pred CCEEECCCCccCcccc-ccCCCccCeEEcCCCcccCc--------------------------------------hhhcC
Confidence 5555555555554333 44444444444444432221 11345
Q ss_pred CCceEEEEccCCcccccCCccccCccccceEeCccccccccCCcCCcCCCCCcEEEccCCcccCCCC--CCCcccccccC
Q 002238 369 KGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIP--SFKSNAIVNTD 446 (948)
Q Consensus 369 ~~~L~~L~ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~ip--~~~~~~~~~~~ 446 (948)
+++|+.|+|++|++++..| +..+++|+.|+|++|++++. ..+..+++|+.|++++|++++.+| .+.....+.++
T Consensus 308 l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~ 383 (466)
T 1o6v_A 308 LKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLN 383 (466)
T ss_dssp CTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGGGTTCTTCCEEECC
T ss_pred CCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccchhhcCCCCCEEecc
Confidence 6788999999999888766 78889999999999998865 478888999999999999988776 24455677788
Q ss_pred CCCCCC
Q 002238 447 GNPDIG 452 (948)
Q Consensus 447 gnp~~~ 452 (948)
+|++.+
T Consensus 384 ~n~~~~ 389 (466)
T 1o6v_A 384 DQAWTN 389 (466)
T ss_dssp CEEEEC
T ss_pred CCcccC
Confidence 887764
No 284
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.97 E-value=5.8e-30 Score=289.97 Aligned_cols=306 Identities=18% Similarity=0.227 Sum_probs=254.0
Q ss_pred CCEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEc
Q 002238 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEI 146 (948)
Q Consensus 68 ~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 146 (948)
.+++.|+|++|++++..+..|.++++|++|+|++|.+++.+| .|.++++|++|+|++|.++.+++..|.++++|++|+|
T Consensus 69 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 148 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 148 (390)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEEC
Confidence 589999999999998888899999999999999999999887 5899999999999999999999998999999999999
Q ss_pred cCCCCCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccccCCCCcccccccceeccCCCCC
Q 002238 147 DNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGN 226 (948)
Q Consensus 147 s~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~ 226 (948)
++|+++. ..|..+..+++|++|++++|++++.. +. .+++|+.|++++|.+++.... ..++.|++.++...
T Consensus 149 ~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~---~~--~l~~L~~L~l~~n~l~~~~~~----~~L~~L~l~~n~l~ 218 (390)
T 3o6n_A 149 SNNNLER-IEDDTFQATTSLQNLQLSSNRLTHVD---LS--LIPSLFHANVSYNLLSTLAIP----IAVEELDASHNSIN 218 (390)
T ss_dssp CSSCCCB-CCTTTTSSCTTCCEEECCSSCCSBCC---GG--GCTTCSEEECCSSCCSEEECC----SSCSEEECCSSCCC
T ss_pred CCCccCc-cChhhccCCCCCCEEECCCCcCCccc---cc--cccccceeecccccccccCCC----CcceEEECCCCeee
Confidence 9999996 45677999999999999999999763 22 678999999999999853211 35777777765544
Q ss_pred CccCCCccccccCCCccEEEccCCcccccCCCCCCCCCCcEEeccCCccccccchhhhCCCCCcEEEcccCcccccCCCC
Q 002238 227 AKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEF 306 (948)
Q Consensus 227 ~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~ 306 (948)
.... ...++|+.|+|++|++++. +.+..+++|+.|+|++|.+++..|..+..+++|+.|+|++|++++..+.+
T Consensus 219 ~~~~------~~~~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 291 (390)
T 3o6n_A 219 VVRG------PVNVELTILKLQHNNLTDT-AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYG 291 (390)
T ss_dssp EEEC------CCCSSCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCEEECSS
T ss_pred eccc------cccccccEEECCCCCCccc-HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcccCccc
Confidence 4322 2357999999999999974 56888999999999999999988999999999999999999998643321
Q ss_pred CCccccccccccCCCCCCCCCCCchhhhhhHHHHHhhCCcchhccccCCCCCCCCccceeecCCceEEEEccCCcccccC
Q 002238 307 DRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTI 386 (948)
Q Consensus 307 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~g~i 386 (948)
..+++|+.|+|++|++. .+
T Consensus 292 ------------------------------------------------------------~~l~~L~~L~L~~n~l~-~~ 310 (390)
T 3o6n_A 292 ------------------------------------------------------------QPIPTLKVLDLSHNHLL-HV 310 (390)
T ss_dssp ------------------------------------------------------------SCCTTCCEEECCSSCCC-CC
T ss_pred ------------------------------------------------------------CCCCCCCEEECCCCcce-ec
Confidence 13458999999999998 57
Q ss_pred CccccCccccceEeCccccccccCCcCCcCCCCCcEEEccCCcccCCCCC--CCcccccccCCCCCCCCc
Q 002238 387 SPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPS--FKSNAIVNTDGNPDIGKE 454 (948)
Q Consensus 387 p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~ip~--~~~~~~~~~~gnp~~~~~ 454 (948)
|..+..+++|+.|+|++|+|+. +| +..+++|+.|++++|++++.-.. +.......+.+++..|..
T Consensus 311 ~~~~~~l~~L~~L~L~~N~i~~-~~--~~~~~~L~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~c~~ 377 (390)
T 3o6n_A 311 ERNQPQFDRLENLYLDHNSIVT-LK--LSTHHTLKNLTLSHNDWDCNSLRALFRNVARPAVDDADQHCKI 377 (390)
T ss_dssp GGGHHHHTTCSEEECCSSCCCC-CC--CCTTCCCSEEECCSSCEEHHHHHHHTTTCCTTTBCCCCSCCCT
T ss_pred CccccccCcCCEEECCCCccce-eC--chhhccCCEEEcCCCCccchhHHHHHHHHHhhcccccCceecc
Confidence 8889999999999999999984 44 78899999999999999863211 222233345566666653
No 285
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=1.6e-30 Score=290.25 Aligned_cols=282 Identities=19% Similarity=0.270 Sum_probs=234.9
Q ss_pred CCCCCccceEEeCCCCEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEcccccccCCCC
Q 002238 54 TDPCKWNHVVCIEDKRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPS 132 (948)
Q Consensus 54 ~~~C~w~gv~c~~~~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~ 132 (948)
..+|.|.|+ |+ +++++++ .+|..+. ++|++|+|++|+|++.++ .|.++++|++|+|++|+++++++
T Consensus 27 ~~~C~~~~~-c~---------~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 93 (353)
T 2z80_A 27 SLSCDRNGI-CK---------GSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEE 93 (353)
T ss_dssp CCEECTTSE-EE---------CCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECT
T ss_pred CCCCCCCeE-ee---------CCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCH
Confidence 456999887 63 4677777 6777665 589999999999999777 79999999999999999999999
Q ss_pred ccccCCCCCCEEEccCCCCCCCCCCcc-ccCCCCCCEEEccCccccccCC-CCCCCCCCCCCcEEEccccc-ccccCCCC
Q 002238 133 DFFTGLSSLQSIEIDNNPFSSWEIPQS-LRNASGLQNFSANSANITGQIP-SFFGPDEFPGLTILHLAFNQ-LIGGLPAS 209 (948)
Q Consensus 133 ~~~~~l~~L~~L~Ls~N~l~~~~~p~~-~~~l~~L~~L~l~~n~l~~~~p-~~~~~~~l~~L~~L~Ls~N~-l~~~~p~~ 209 (948)
..|+++++|++|+|++|+++ .+|.. +.++++|++|++++|++++..+ ..|. .+++|++|+|++|+ +.+..+..
T Consensus 94 ~~~~~l~~L~~L~Ls~n~l~--~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~--~l~~L~~L~l~~n~~~~~~~~~~ 169 (353)
T 2z80_A 94 DSFSSLGSLEHLDLSYNYLS--NLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFS--HLTKLQILRVGNMDTFTKIQRKD 169 (353)
T ss_dssp TTTTTCTTCCEEECCSSCCS--SCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCT--TCTTCCEEEEEESSSCCEECTTT
T ss_pred hhcCCCCCCCEEECCCCcCC--cCCHhHhCCCccCCEEECCCCCCcccCchhhhc--cCCCCcEEECCCCccccccCHHH
Confidence 99999999999999999999 46655 8899999999999999996555 4676 89999999999995 66555555
Q ss_pred cccccccceeccCCCCCCccCCCccccccCCCccEEEccCCcccccCC-CCCCCCCCcEEeccCCccccccch-hhhCCC
Q 002238 210 FSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGPVPD-SLVKLE 287 (948)
Q Consensus 210 ~~~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~-~l~~l~ 287 (948)
| .++++|++|++++|++++..+ .+..+++|++|+|++|.++ .+|. .+..++
T Consensus 170 ~--------------------------~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~-~~~~~~~~~~~ 222 (353)
T 2z80_A 170 F--------------------------AGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTS 222 (353)
T ss_dssp T--------------------------TTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCST-THHHHHHHHTT
T ss_pred c--------------------------cCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccc-cchhhhhhhcc
Confidence 4 478999999999999999766 5888999999999999998 4554 455699
Q ss_pred CCcEEEcccCcccccCCCCCCccccccccccCCCCCCCCCCCchhhhhhHHHHHhhCCcchhccccCCCCCCCCccceee
Q 002238 288 SLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTC 367 (948)
Q Consensus 288 ~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (948)
+|+.|+|++|++++..+.-.. ...
T Consensus 223 ~L~~L~L~~n~l~~~~~~~l~--------------------------------------------------------~~~ 246 (353)
T 2z80_A 223 SVECLELRDTDLDTFHFSELS--------------------------------------------------------TGE 246 (353)
T ss_dssp TEEEEEEESCBCTTCCCC--------------------------------------------------------------
T ss_pred cccEEECCCCccccccccccc--------------------------------------------------------ccc
Confidence 999999999999875443000 001
Q ss_pred cCCceEEEEccCCcccc----cCCccccCccccceEeCccccccccCCcC-CcCCCCCcEEEccCCcccCCCCC
Q 002238 368 TKGNITVINFQKMNLTG----TISPEFASFKSLQRLILADNNLSGMIPEG-LSVLGALKELDVSNNQLYGKIPS 436 (948)
Q Consensus 368 ~~~~L~~L~ls~n~l~g----~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~-l~~l~~L~~L~ls~N~l~g~ip~ 436 (948)
....++.++|++|.+.+ .+|..+.++++|+.|+|++|+|+ .+|.. |..+++|++|+|++|++++..|.
T Consensus 247 ~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~~~~ 319 (353)
T 2z80_A 247 TNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCPR 319 (353)
T ss_dssp CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred ccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCcCCC
Confidence 12356778888888877 58889999999999999999999 67766 58999999999999999998773
No 286
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.97 E-value=1e-29 Score=283.14 Aligned_cols=298 Identities=19% Similarity=0.287 Sum_probs=190.3
Q ss_pred CCEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCCCcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEcc
Q 002238 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEID 147 (948)
Q Consensus 68 ~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 147 (948)
.+++.|+++++++.. ++ .+..+++|++|+|++|.+++..+ +.++++|++|+|++|.++.++ .|..+++|++|+|+
T Consensus 44 ~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~~~~~-~~~l~~L~~L~L~~n~i~~~~--~~~~l~~L~~L~l~ 118 (347)
T 4fmz_A 44 ESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQITDISP-LSNLVKLTNLYIGTNKITDIS--ALQNLTNLRELYLN 118 (347)
T ss_dssp TTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCCG--GGTTCTTCSEEECT
T ss_pred ccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCccccchh-hhcCCcCCEEEccCCcccCch--HHcCCCcCCEEECc
Confidence 578999999999884 44 48889999999999999998766 889999999999999999863 58999999999999
Q ss_pred CCCCCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccccCCCCccc-ccccceeccCCCCC
Q 002238 148 NNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSG-SQIQSLWVNGQNGN 226 (948)
Q Consensus 148 ~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~l~~l~~~~~~~~ 226 (948)
+|+++. ++. +..+++|+.|++++|.....++. +. .+++|++|++++|++.+..+ +.. .+++.|++.++...
T Consensus 119 ~n~i~~--~~~-~~~l~~L~~L~l~~n~~~~~~~~-~~--~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~ 190 (347)
T 4fmz_A 119 EDNISD--ISP-LANLTKMYSLNLGANHNLSDLSP-LS--NMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIE 190 (347)
T ss_dssp TSCCCC--CGG-GTTCTTCCEEECTTCTTCCCCGG-GT--TCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCC
T ss_pred CCcccC--chh-hccCCceeEEECCCCCCcccccc-hh--hCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccc
Confidence 999984 454 88999999999999977666555 54 79999999999999875443 321 23444444332211
Q ss_pred CccCCCccccccCCCccEEEccCCcccccCCCCCCCCCCcEEeccCCccccccchhhhCCCCCcEEEcccCcccccCCCC
Q 002238 227 AKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEF 306 (948)
Q Consensus 227 ~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~ 306 (948)
. . ..+..+++|+.|++++|.+.+..+ +..+++|+.|+|++|.+++. +. +..+++|+.|++++|.+++. +.+
T Consensus 191 ~---~--~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~-~~~ 261 (347)
T 4fmz_A 191 D---I--SPLASLTSLHYFTAYVNQITDITP-VANMTRLNSLKIGNNKITDL-SP-LANLSQLTWLEIGTNQISDI-NAV 261 (347)
T ss_dssp C---C--GGGGGCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCC-GGG
T ss_pred c---c--ccccCCCccceeecccCCCCCCch-hhcCCcCCEEEccCCccCCC-cc-hhcCCCCCEEECCCCccCCC-hhH
Confidence 1 1 114455555556665555554333 44555555666666555532 22 55555566666655555532 333
Q ss_pred CCccccccccccCCCCCCCCCCCchhhhhhHHHHHhhCCcchhccccCCCCCCCCccceeecCCceEEEEccCCcccccC
Q 002238 307 DRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTI 386 (948)
Q Consensus 307 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~g~i 386 (948)
..+ ++|+.|++++|.+++.
T Consensus 262 ~~l------------------------------------------------------------~~L~~L~l~~n~l~~~- 280 (347)
T 4fmz_A 262 KDL------------------------------------------------------------TKLKMLNVGSNQISDI- 280 (347)
T ss_dssp TTC------------------------------------------------------------TTCCEEECCSSCCCCC-
T ss_pred hcC------------------------------------------------------------CCcCEEEccCCccCCC-
Confidence 333 3455555555555543
Q ss_pred CccccCccccceEeCccccccccCCcCCcCCCCCcEEEccCCcccCCCC--CCCcccccccCCCC
Q 002238 387 SPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIP--SFKSNAIVNTDGNP 449 (948)
Q Consensus 387 p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~ip--~~~~~~~~~~~gnp 449 (948)
+.+..+++|+.|+|++|++++..|..+..+++|++|++++|++++.+| .+.....+.+++|+
T Consensus 281 -~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~N~ 344 (347)
T 4fmz_A 281 -SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRPLASLSKMDSADFANQV 344 (347)
T ss_dssp -GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGGGGGCTTCSEESSSCC-
T ss_pred -hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccChhhhhccceeehhhhc
Confidence 234555555555555555555555555555555555555555554433 22334444455554
No 287
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=1.9e-29 Score=278.88 Aligned_cols=265 Identities=20% Similarity=0.279 Sum_probs=221.1
Q ss_pred EEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEccC
Q 002238 70 ITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDN 148 (948)
Q Consensus 70 v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 148 (948)
++.+++++++++ .+|..+. +.|+.|+|++|+|++..+ .|.++++|++|+|++|.++++.|..|+++++|++|+|++
T Consensus 33 l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (330)
T 1xku_A 33 LRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 109 (330)
T ss_dssp TTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCC
Confidence 456677777777 6676654 689999999999999877 799999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccc--cCCCCcccccccceeccCCCCC
Q 002238 149 NPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIG--GLPASFSGSQIQSLWVNGQNGN 226 (948)
Q Consensus 149 N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~~~l~~l~~~~~~~~ 226 (948)
|+++ .+|..+. ++|++|++++|++++..+..|. .+++|++|+|++|++.. ..+..
T Consensus 110 n~l~--~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~--~l~~L~~L~l~~n~l~~~~~~~~~----------------- 166 (330)
T 1xku_A 110 NQLK--ELPEKMP--KTLQELRVHENEITKVRKSVFN--GLNQMIVVELGTNPLKSSGIENGA----------------- 166 (330)
T ss_dssp SCCS--BCCSSCC--TTCCEEECCSSCCCBBCHHHHT--TCTTCCEEECCSSCCCGGGBCTTG-----------------
T ss_pred CcCC--ccChhhc--ccccEEECCCCcccccCHhHhc--CCccccEEECCCCcCCccCcChhh-----------------
Confidence 9998 6777665 7999999999999988887787 89999999999999863 44433
Q ss_pred CccCCCccccccCCCccEEEccCCcccccCCCCCCCCCCcEEeccCCccccccchhhhCCCCCcEEEcccCcccccCCCC
Q 002238 227 AKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEF 306 (948)
Q Consensus 227 ~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~ 306 (948)
+.++++|++|++++|.++..+..+. ++|+.|+|++|++++..|..+..+++|+.|+|++|++++..+.
T Consensus 167 ---------~~~l~~L~~L~l~~n~l~~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~- 234 (330)
T 1xku_A 167 ---------FQGMKKLSYIRIADTNITTIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNG- 234 (330)
T ss_dssp ---------GGGCTTCCEEECCSSCCCSCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTT-
T ss_pred ---------ccCCCCcCEEECCCCccccCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChh-
Confidence 4578999999999999987554443 8899999999999988889999999999999999999876553
Q ss_pred CCccccccccccCCCCCCCCCCCchhhhhhHHHHHhhCCcchhccccCCCCCCCCccceeecCCceEEEEccCCcccccC
Q 002238 307 DRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTI 386 (948)
Q Consensus 307 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~g~i 386 (948)
.+..+++|+.|+|++|.++ .+
T Consensus 235 ----------------------------------------------------------~~~~l~~L~~L~L~~N~l~-~l 255 (330)
T 1xku_A 235 ----------------------------------------------------------SLANTPHLRELHLNNNKLV-KV 255 (330)
T ss_dssp ----------------------------------------------------------TGGGSTTCCEEECCSSCCS-SC
T ss_pred ----------------------------------------------------------hccCCCCCCEEECCCCcCc-cC
Confidence 1123457888888888888 77
Q ss_pred CccccCccccceEeCccccccccCCcCCcC------CCCCcEEEccCCccc
Q 002238 387 SPEFASFKSLQRLILADNNLSGMIPEGLSV------LGALKELDVSNNQLY 431 (948)
Q Consensus 387 p~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~------l~~L~~L~ls~N~l~ 431 (948)
|..+..+++|++|+|++|+|++..+..|.. ...|+.|++++|++.
T Consensus 256 p~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~ 306 (330)
T 1xku_A 256 PGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 306 (330)
T ss_dssp CTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSC
T ss_pred ChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCccc
Confidence 888888888999999999888766666654 367888888888886
No 288
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.97 E-value=1e-29 Score=316.21 Aligned_cols=334 Identities=18% Similarity=0.205 Sum_probs=256.8
Q ss_pred EEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEccccccc-CCCCccccCCCCCCEEEccC
Q 002238 71 TRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFT-SVPSDFFTGLSSLQSIEIDN 148 (948)
Q Consensus 71 ~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~ 148 (948)
..++.++++++ .+|. ..++|++|||++|.|++..| .|.++++|++|+|++|.+. .+.|..|+++++|++|+|++
T Consensus 7 ~~~dcs~~~L~-~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~ 82 (844)
T 3j0a_A 7 RIAFYRFCNLT-QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGS 82 (844)
T ss_dssp EEEEESCCCSS-CCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTT
T ss_pred eEEEccCCCCC-CCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCC
Confidence 34667788898 6666 45899999999999999776 7999999999999999554 56688999999999999999
Q ss_pred CCCCCCCCCccccCCCCCCEEEccCccccccCCCC--CCCCCCCCCcEEEcccccccccCCC-Cccc-ccccceeccCCC
Q 002238 149 NPFSSWEIPQSLRNASGLQNFSANSANITGQIPSF--FGPDEFPGLTILHLAFNQLIGGLPA-SFSG-SQIQSLWVNGQN 224 (948)
Q Consensus 149 N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~--~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~-~~l~~l~~~~~~ 224 (948)
|+++. ..|..|.++++|++|+|++|.+++.+|.. |. .+++|++|+|++|.+++..+. .|.. .+|+.|++.+
T Consensus 83 N~l~~-~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~--~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~-- 157 (844)
T 3j0a_A 83 SKIYF-LHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFR--NLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSS-- 157 (844)
T ss_dssp CCCCE-ECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCS--SCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEES--
T ss_pred CcCcc-cCHhHccCCcccCEeeCcCCCCCcccccCcccc--ccCCCCEEECCCCcccccccchhHhhCCCCCEEECCC--
Confidence 99996 56999999999999999999999877765 65 899999999999999987653 4543 4566666554
Q ss_pred CCCccCCCccccccC--CCccEEEccCCcccccCC-CCCCCCC------CcEEeccCCccccccchhhhCC---------
Q 002238 225 GNAKLGGGIDVIQNM--TSLKEIWLHSNAFSGPLP-DFSGVKQ------LESLSLRDNFFTGPVPDSLVKL--------- 286 (948)
Q Consensus 225 ~~~~~~~~~~~l~~l--~~L~~L~Ls~N~l~~~~~-~~~~l~~------L~~L~L~~N~l~~~~p~~l~~l--------- 286 (948)
|......+..+..+ ++|+.|+|+.|.+.+..+ .+..+.+ |+.|+|++|.+++.+|..+...
T Consensus 158 -N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L 236 (844)
T 3j0a_A 158 -NQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSL 236 (844)
T ss_dssp -SCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEE
T ss_pred -CcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccce
Confidence 44445555666666 789999999999888665 3444443 8999999998877666555432
Q ss_pred -----------------------------CCCcEEEcccCcccccCCC-CCCccccccccccCCCCCCCCCCCchhhhhh
Q 002238 287 -----------------------------ESLKIVNMTNNLLQGPVPE-FDRSVSLDMAKGSNNFCLPSPGACDPRLNAL 336 (948)
Q Consensus 287 -----------------------------~~L~~L~Ls~N~l~g~~p~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 336 (948)
++|+.|+|++|.+.+..|. +..+.+|..+++.+|.+...+.
T Consensus 237 ~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~--------- 307 (844)
T 3j0a_A 237 ILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIAD--------- 307 (844)
T ss_dssp ECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECT---------
T ss_pred ecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCCh---------
Confidence 5678888888888776664 5566667666666665433221
Q ss_pred HHHHHhhCCcchhccccCCCCCCCCccceeecCCceEEEEccCCcccccCCccccCccccceEeCccccccccCCcCCcC
Q 002238 337 LSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSV 416 (948)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~ 416 (948)
..+..+++|+.|+|++|.+.+..|..|.++++|+.|+|++|++.+..+..|..
T Consensus 308 ---------------------------~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~ 360 (844)
T 3j0a_A 308 ---------------------------EAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKF 360 (844)
T ss_dssp ---------------------------TTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCS
T ss_pred ---------------------------HHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcC
Confidence 12334568888888888888888888888888888888888888777778888
Q ss_pred CCCCcEEEccCCcccCCCCCCCcccccccCCCCCC
Q 002238 417 LGALKELDVSNNQLYGKIPSFKSNAIVNTDGNPDI 451 (948)
Q Consensus 417 l~~L~~L~ls~N~l~g~ip~~~~~~~~~~~gnp~~ 451 (948)
+++|++|+|++|.+++ ++.+.....+.+.+|...
T Consensus 361 l~~L~~L~Ls~N~l~~-i~~~~~L~~L~l~~N~l~ 394 (844)
T 3j0a_A 361 LEKLQTLDLRDNALTT-IHFIPSIPDIFLSGNKLV 394 (844)
T ss_dssp CCCCCEEEEETCCSCC-CSSCCSCSEEEEESCCCC
T ss_pred CCCCCEEECCCCCCCc-ccCCCCcchhccCCCCcc
Confidence 8888888888888875 344555666777777654
No 289
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=2.1e-29 Score=278.59 Aligned_cols=197 Identities=22% Similarity=0.326 Sum_probs=149.6
Q ss_pred EEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEccC
Q 002238 70 ITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDN 148 (948)
Q Consensus 70 v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 148 (948)
++.+++++++++ .+|..+. ++|+.|+|++|.|++..+ .|.++++|++|+|++|++++++|..|+++++|++|+|++
T Consensus 35 l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 111 (332)
T 2ft3_A 35 LRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISK 111 (332)
T ss_dssp TTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCS
T ss_pred CCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCC
Confidence 456777777877 6777664 689999999999998777 789999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccc--cCCCCcccccccceeccCCCCC
Q 002238 149 NPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIG--GLPASFSGSQIQSLWVNGQNGN 226 (948)
Q Consensus 149 N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~~~l~~l~~~~~~~~ 226 (948)
|+++ .+|..+. ++|++|++++|++++..+..|. .+++|++|+|++|+++. ..|..+.
T Consensus 112 n~l~--~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~--~l~~L~~L~l~~n~l~~~~~~~~~~~--------------- 170 (332)
T 2ft3_A 112 NHLV--EIPPNLP--SSLVELRIHDNRIRKVPKGVFS--GLRNMNCIEMGGNPLENSGFEPGAFD--------------- 170 (332)
T ss_dssp SCCC--SCCSSCC--TTCCEEECCSSCCCCCCSGGGS--SCSSCCEEECCSCCCBGGGSCTTSSC---------------
T ss_pred CcCC--ccCcccc--ccCCEEECCCCccCccCHhHhC--CCccCCEEECCCCccccCCCCccccc---------------
Confidence 9998 6777665 8999999999999987777776 89999999999999863 5565554
Q ss_pred CccCCCccccccCCCccEEEccCCcccccCCCCCCCCCCcEEeccCCccccccchhhhCCCCCcEEEcccCcccccCC
Q 002238 227 AKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVP 304 (948)
Q Consensus 227 ~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p 304 (948)
.+ +|++|++++|++++.+..+. ++|+.|+|++|.+++..|..+..+++|+.|+|++|++++..|
T Consensus 171 -----------~l-~L~~L~l~~n~l~~l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~ 234 (332)
T 2ft3_A 171 -----------GL-KLNYLRISEAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIEN 234 (332)
T ss_dssp -----------SC-CCSCCBCCSSBCSSCCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCT
T ss_pred -----------CC-ccCEEECcCCCCCccCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCCh
Confidence 33 56666666666665333332 566666666666665555666666666666666666655443
No 290
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.97 E-value=4.5e-29 Score=287.13 Aligned_cols=303 Identities=17% Similarity=0.146 Sum_probs=229.5
Q ss_pred CCEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCCCcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEcc
Q 002238 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEID 147 (948)
Q Consensus 68 ~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 147 (948)
.+++.|++++|++++. | .+..+++|++|+|++|+|++. | +..+++|++|+|++|.+++++ |+++++|++|+|+
T Consensus 42 ~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~-~~~l~~L~~L~Ls~N~l~~~~---~~~l~~L~~L~L~ 114 (457)
T 3bz5_A 42 ATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D-LSQNTNLTYLACDSNKLTNLD---VTPLTKLTYLNCD 114 (457)
T ss_dssp TTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C-CTTCTTCSEEECCSSCCSCCC---CTTCTTCCEEECC
T ss_pred CCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c-cccCCCCCEEECcCCCCceee---cCCCCcCCEEECC
Confidence 5899999999999974 5 799999999999999999986 3 889999999999999999974 8899999999999
Q ss_pred CCCCCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccccCCCCccc-ccccceeccCCCCC
Q 002238 148 NNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSG-SQIQSLWVNGQNGN 226 (948)
Q Consensus 148 ~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~l~~l~~~~~~~~ 226 (948)
+|++++ +| +..+++|++|++++|++++. + ++ .+++|++|++++|+..+.++ +.. .+++.|++.++...
T Consensus 115 ~N~l~~--l~--~~~l~~L~~L~l~~N~l~~l-~--l~--~l~~L~~L~l~~n~~~~~~~--~~~l~~L~~L~ls~n~l~ 183 (457)
T 3bz5_A 115 TNKLTK--LD--VSQNPLLTYLNCARNTLTEI-D--VS--HNTQLTELDCHLNKKITKLD--VTPQTQLTTLDCSFNKIT 183 (457)
T ss_dssp SSCCSC--CC--CTTCTTCCEEECTTSCCSCC-C--CT--TCTTCCEEECTTCSCCCCCC--CTTCTTCCEEECCSSCCC
T ss_pred CCcCCe--ec--CCCCCcCCEEECCCCcccee-c--cc--cCCcCCEEECCCCCcccccc--cccCCcCCEEECCCCccc
Confidence 999995 44 88999999999999999985 3 54 89999999999997666663 222 45666666544332
Q ss_pred CccCCCccccccCCCccEEEccCCcccccCCCCCCCCCCcEEeccCCccccccchhhhCCCCCcEEEcccCcccccCCCC
Q 002238 227 AKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEF 306 (948)
Q Consensus 227 ~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~ 306 (948)
. .+ +..+++|+.|++++|++++. .+..+++|+.|+|++|++++ +| +..+++|+.|++++|++++..+
T Consensus 184 ~----l~--l~~l~~L~~L~l~~N~l~~~--~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~-- 250 (457)
T 3bz5_A 184 E----LD--VSQNKLLNRLNCDTNNITKL--DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDV-- 250 (457)
T ss_dssp C----CC--CTTCTTCCEEECCSSCCSCC--CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCC--
T ss_pred e----ec--cccCCCCCEEECcCCcCCee--ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCH--
Confidence 2 22 67888888999998888875 47778888899999998886 66 7888888999999998887543
Q ss_pred CCccccccccccCCCCCCCCCCCchhhhhhHHHHHhhCCcchhccccCCCCCCCCccceeecCCceEEEEccCCcccccC
Q 002238 307 DRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTI 386 (948)
Q Consensus 307 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~g~i 386 (948)
..+.+|..+....+....+. ..++.....+ ....+++|+.|++++|.+.|.+
T Consensus 251 ~~l~~L~~L~l~~n~L~~L~--------------------------l~~n~~~~~~--~~~~l~~L~~L~Ls~n~~l~~l 302 (457)
T 3bz5_A 251 STLSKLTTLHCIQTDLLEID--------------------------LTHNTQLIYF--QAEGCRKIKELDVTHNTQLYLL 302 (457)
T ss_dssp TTCTTCCEEECTTCCCSCCC--------------------------CTTCTTCCEE--ECTTCTTCCCCCCTTCTTCCEE
T ss_pred HHCCCCCEEeccCCCCCEEE--------------------------CCCCccCCcc--cccccccCCEEECCCCccccee
Confidence 23334443333333211110 0000000000 1224568888999999888877
Q ss_pred Ccc--------ccCccccceEeCccccccccCCcCCcCCCCCcEEEccCCcccC
Q 002238 387 SPE--------FASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYG 432 (948)
Q Consensus 387 p~~--------~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g 432 (948)
|.. ++++++|+.|+|++|+|++ ++ +..+++|+.||+++|+|+|
T Consensus 303 ~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~-l~--l~~l~~L~~L~l~~N~l~~ 353 (457)
T 3bz5_A 303 DCQAAGITELDLSQNPKLVYLYLNNTELTE-LD--VSHNTKLKSLSCVNAHIQD 353 (457)
T ss_dssp ECTTCCCSCCCCTTCTTCCEEECTTCCCSC-CC--CTTCTTCSEEECCSSCCCB
T ss_pred ccCCCcceEechhhcccCCEEECCCCcccc-cc--cccCCcCcEEECCCCCCCC
Confidence 753 5566788899999999987 33 8888999999999999987
No 291
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.97 E-value=2.7e-29 Score=291.35 Aligned_cols=306 Identities=23% Similarity=0.334 Sum_probs=252.2
Q ss_pred CCEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCCCcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEcc
Q 002238 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEID 147 (948)
Q Consensus 68 ~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 147 (948)
.+++.|+|++|.+++..+ +.++++|++|+|++|.+.+..+ +.++++|++|+|++|.++++++ +.++++|++|+|+
T Consensus 68 ~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~ 142 (466)
T 1o6v_A 68 NNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP-LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELS 142 (466)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEE
T ss_pred cCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh-hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEECC
Confidence 589999999999986543 8899999999999999988776 8889999999999999988865 8889999999999
Q ss_pred CCCCCCCCCC--------------------ccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccccCC
Q 002238 148 NNPFSSWEIP--------------------QSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLP 207 (948)
Q Consensus 148 ~N~l~~~~~p--------------------~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p 207 (948)
+|++.. ++ ..+.++++|+.|++++|.+++.. .+. .+++|++|++++|++.+..|
T Consensus 143 ~n~l~~--~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~--~l~--~l~~L~~L~l~~n~l~~~~~ 216 (466)
T 1o6v_A 143 SNTISD--ISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDIS--VLA--KLTNLESLIATNNQISDITP 216 (466)
T ss_dssp EEEECC--CGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCCG--GGG--GCTTCSEEECCSSCCCCCGG
T ss_pred CCccCC--ChhhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCCh--hhc--cCCCCCEEEecCCccccccc
Confidence 988874 22 13667888999999999998653 354 79999999999999997766
Q ss_pred CCcccccccceeccCCCCCCccCCCccccccCCCccEEEccCCcccccCCCCCCCCCCcEEeccCCccccccchhhhCCC
Q 002238 208 ASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLE 287 (948)
Q Consensus 208 ~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 287 (948)
.. ...+++.|++.++.... ...+..+++|+.|++++|.+++..+ +..+++|+.|+|++|.+++..+ +..++
T Consensus 217 ~~-~l~~L~~L~l~~n~l~~-----~~~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~ 287 (466)
T 1o6v_A 217 LG-ILTNLDELSLNGNQLKD-----IGTLASLTNLTDLDLANNQISNLAP-LSGLTKLTELKLGANQISNISP--LAGLT 287 (466)
T ss_dssp GG-GCTTCCEEECCSSCCCC-----CGGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCCCCGG--GTTCT
T ss_pred cc-ccCCCCEEECCCCCccc-----chhhhcCCCCCEEECCCCccccchh-hhcCCCCCEEECCCCccCcccc--ccCCC
Confidence 22 12567777776554332 2468899999999999999998766 8889999999999999996544 89999
Q ss_pred CCcEEEcccCcccccCCCCCCccccccccccCCCCCCCCCCCchhhhhhHHHHHhhCCcchhccccCCCCCCCCccceee
Q 002238 288 SLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTC 367 (948)
Q Consensus 288 ~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (948)
+|+.|+|++|++++..| +..+.+|..++..+|.....+ .+.
T Consensus 288 ~L~~L~L~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~--------------------------------------~~~ 328 (466)
T 1o6v_A 288 ALTNLELNENQLEDISP-ISNLKNLTYLTLYFNNISDIS--------------------------------------PVS 328 (466)
T ss_dssp TCSEEECCSSCCSCCGG-GGGCTTCSEEECCSSCCSCCG--------------------------------------GGG
T ss_pred ccCeEEcCCCcccCchh-hcCCCCCCEEECcCCcCCCch--------------------------------------hhc
Confidence 99999999999998655 777788888888777543332 123
Q ss_pred cCCceEEEEccCCcccccCCccccCccccceEeCccccccccCCcCCcCCCCCcEEEccCCcccCCCCC
Q 002238 368 TKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPS 436 (948)
Q Consensus 368 ~~~~L~~L~ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~ip~ 436 (948)
.+++|+.|++++|.+++. +.+.++++|+.|+|++|++++..| +..+++|+.|++++|++++.+..
T Consensus 329 ~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~~p~~ 393 (466)
T 1o6v_A 329 SLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNAPVN 393 (466)
T ss_dssp GCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEECCCBC
T ss_pred cCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccCCchh
Confidence 567999999999999986 579999999999999999998887 89999999999999999985433
No 292
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.96 E-value=6.4e-29 Score=274.55 Aligned_cols=278 Identities=20% Similarity=0.276 Sum_probs=228.7
Q ss_pred CCccceEEeCC----------CCEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEcccc
Q 002238 57 CKWNHVVCIED----------KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNN 125 (948)
Q Consensus 57 C~w~gv~c~~~----------~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N 125 (948)
|.|..+.|... ..++.|+|++|++++..+..|.++++|++|+|++|.+++..| .|.++++|++|+|++|
T Consensus 31 c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n 110 (330)
T 1xku_A 31 CHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKN 110 (330)
T ss_dssp EETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSS
T ss_pred CCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCC
Confidence 68999998532 478999999999998878899999999999999999999866 7999999999999999
Q ss_pred cccCCCCccccCCCCCCEEEccCCCCCCCCCCccccCCCCCCEEEccCccccc--cCCCCCCCCCCCCCcEEEccccccc
Q 002238 126 QFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITG--QIPSFFGPDEFPGLTILHLAFNQLI 203 (948)
Q Consensus 126 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~--~~p~~~~~~~l~~L~~L~Ls~N~l~ 203 (948)
+++.++...+ ++|++|+|++|+++. ..+..+.++++|+.|++++|.++. ..+..+. .+++|++|++++|+++
T Consensus 111 ~l~~l~~~~~---~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~--~l~~L~~L~l~~n~l~ 184 (330)
T 1xku_A 111 QLKELPEKMP---KTLQELRVHENEITK-VRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQ--GMKKLSYIRIADTNIT 184 (330)
T ss_dssp CCSBCCSSCC---TTCCEEECCSSCCCB-BCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGG--GCTTCCEEECCSSCCC
T ss_pred cCCccChhhc---ccccEEECCCCcccc-cCHhHhcCCccccEEECCCCcCCccCcChhhcc--CCCCcCEEECCCCccc
Confidence 9998876644 799999999999995 445678999999999999999964 6777776 8999999999999998
Q ss_pred ccCCCCcccccccceeccCCCCCCccCCCccccccCCCccEEEccCCcccccCC-CCCCCCCCcEEeccCCccccccchh
Q 002238 204 GGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGPVPDS 282 (948)
Q Consensus 204 ~~~p~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~ 282 (948)
.+|..+ .++|++|+|++|++++..+ .+.++++|+.|+|++|.+++..+..
T Consensus 185 -~l~~~~----------------------------~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~ 235 (330)
T 1xku_A 185 -TIPQGL----------------------------PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGS 235 (330)
T ss_dssp -SCCSSC----------------------------CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTT
T ss_pred -cCCccc----------------------------cccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhh
Confidence 455543 2688999999999988765 5788899999999999999777778
Q ss_pred hhCCCCCcEEEcccCcccccCCCCCCccccccccccCCCCCCCCCCCchhhhhhHHHHHhhCCcchhccccCCCCCCCCc
Q 002238 283 LVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDW 362 (948)
Q Consensus 283 l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (948)
+..+++|+.|+|++|+++ .+|..
T Consensus 236 ~~~l~~L~~L~L~~N~l~-~lp~~-------------------------------------------------------- 258 (330)
T 1xku_A 236 LANTPHLRELHLNNNKLV-KVPGG-------------------------------------------------------- 258 (330)
T ss_dssp GGGSTTCCEEECCSSCCS-SCCTT--------------------------------------------------------
T ss_pred ccCCCCCCEEECCCCcCc-cCChh--------------------------------------------------------
Confidence 889999999999999887 33320
Q ss_pred cceeecCCceEEEEccCCcccccCCccccCc------cccceEeCccccccc--cCCcCCcCCCCCcEEEccCCc
Q 002238 363 IGVTCTKGNITVINFQKMNLTGTISPEFASF------KSLQRLILADNNLSG--MIPEGLSVLGALKELDVSNNQ 429 (948)
Q Consensus 363 ~~~~~~~~~L~~L~ls~n~l~g~ip~~~~~l------~~L~~L~Ls~N~l~g--~ip~~l~~l~~L~~L~ls~N~ 429 (948)
+..+++|+.|+|++|++++..+..|+.. +.|+.|+|++|.+.. ..|..|..+.+|+.++|++|+
T Consensus 259 ---l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 259 ---LADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp ---TTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred ---hccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 1123478888888888888777777543 678899999998863 557788889999999999885
No 293
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.96 E-value=5.2e-29 Score=277.46 Aligned_cols=285 Identities=21% Similarity=0.267 Sum_probs=208.2
Q ss_pred ccCCCCCcEEEcccCCCCCCCCCcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEccCCCCCCCCCCccccCCCCCC
Q 002238 88 LQNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQ 167 (948)
Q Consensus 88 l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~ 167 (948)
+..+++|++|++++|.+... +.+..+++|++|+|++|.++++++ |..+++|++|+|++|+++. +| .+.++++|+
T Consensus 40 ~~~l~~L~~L~l~~~~i~~~-~~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~--~~-~~~~l~~L~ 113 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVASI-QGIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD--IS-ALQNLTNLR 113 (347)
T ss_dssp HHHHTTCSEEECCSSCCCCC-TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC--CG-GGTTCTTCS
T ss_pred chhcccccEEEEeCCccccc-hhhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccC--ch-HHcCCCcCC
Confidence 45688999999999999865 568999999999999999999876 9999999999999999985 44 699999999
Q ss_pred EEEccCccccccCCCCCCCCCCCCCcEEEcccccccccCCCCcccccccceeccCCCCCCccCCCccccccCCCccEEEc
Q 002238 168 NFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWL 247 (948)
Q Consensus 168 ~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~L 247 (948)
+|++++|.+++..+ +. .+++|++|++++|.....++. + ..+++|++|++
T Consensus 114 ~L~l~~n~i~~~~~--~~--~l~~L~~L~l~~n~~~~~~~~-~--------------------------~~l~~L~~L~l 162 (347)
T 4fmz_A 114 ELYLNEDNISDISP--LA--NLTKMYSLNLGANHNLSDLSP-L--------------------------SNMTGLNYLTV 162 (347)
T ss_dssp EEECTTSCCCCCGG--GT--TCTTCCEEECTTCTTCCCCGG-G--------------------------TTCTTCCEEEC
T ss_pred EEECcCCcccCchh--hc--cCCceeEEECCCCCCcccccc-h--------------------------hhCCCCcEEEe
Confidence 99999999997654 54 899999999999976654443 2 24455555555
Q ss_pred cCCcccccCCCCCCCCCCcEEeccCCccccccchhhhCCCCCcEEEcccCcccccCCCCCCccccccccccCCCCCCCCC
Q 002238 248 HSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPG 327 (948)
Q Consensus 248 s~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~~~~~ 327 (948)
++|.+.+..+ +..+++|+.|++++|.+.+ ++. +..+++|+.|++++|.+++..+ +..+.+|..++..+|.....+
T Consensus 163 ~~~~~~~~~~-~~~l~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~~~~-~~~~~~L~~L~l~~n~l~~~~- 237 (347)
T 4fmz_A 163 TESKVKDVTP-IANLTDLYSLSLNYNQIED-ISP-LASLTSLHYFTAYVNQITDITP-VANMTRLNSLKIGNNKITDLS- 237 (347)
T ss_dssp CSSCCCCCGG-GGGCTTCSEEECTTSCCCC-CGG-GGGCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCCCG-
T ss_pred cCCCcCCchh-hccCCCCCEEEccCCcccc-ccc-ccCCCccceeecccCCCCCCch-hhcCCcCCEEEccCCccCCCc-
Confidence 5555543332 4445555555555555552 222 4455555555555555544333 334444444444443322211
Q ss_pred CCchhhhhhHHHHHhhCCcchhccccCCCCCCCCccceeecCCceEEEEccCCcccccCCccccCccccceEeCcccccc
Q 002238 328 ACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLS 407 (948)
Q Consensus 328 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~ 407 (948)
.+..+++|+.|++++|.+++. +.+..+++|+.|+|++|+++
T Consensus 238 -------------------------------------~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~ 278 (347)
T 4fmz_A 238 -------------------------------------PLANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQIS 278 (347)
T ss_dssp -------------------------------------GGTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCC
T ss_pred -------------------------------------chhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccC
Confidence 022456899999999999874 57999999999999999999
Q ss_pred ccCCcCCcCCCCCcEEEccCCcccCCCC----CCCcccccccCCCCCCCCcc
Q 002238 408 GMIPEGLSVLGALKELDVSNNQLYGKIP----SFKSNAIVNTDGNPDIGKEK 455 (948)
Q Consensus 408 g~ip~~l~~l~~L~~L~ls~N~l~g~ip----~~~~~~~~~~~gnp~~~~~~ 455 (948)
+. +.+..+++|++|++++|++++..| .+.....+.+++|+..+..+
T Consensus 279 ~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~ 328 (347)
T 4fmz_A 279 DI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP 328 (347)
T ss_dssp CC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG
T ss_pred CC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC
Confidence 64 468999999999999999998765 35677889999999775544
No 294
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.96 E-value=4.6e-29 Score=287.05 Aligned_cols=282 Identities=15% Similarity=0.144 Sum_probs=221.1
Q ss_pred CCEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCCCcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEcc
Q 002238 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEID 147 (948)
Q Consensus 68 ~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 147 (948)
.+++.|+|++|++++. | ++++++|++|+|++|.|++. + +.++++|++|+|++|++++++ ++.+++|++|+|+
T Consensus 64 ~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~-~~~l~~L~~L~L~~N~l~~l~---~~~l~~L~~L~l~ 135 (457)
T 3bz5_A 64 TGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D-VTPLTKLTYLNCDTNKLTKLD---VSQNPLLTYLNCA 135 (457)
T ss_dssp TTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C-CTTCTTCCEEECCSSCCSCCC---CTTCTTCCEEECT
T ss_pred CCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e-cCCCCcCCEEECCCCcCCeec---CCCCCcCCEEECC
Confidence 6899999999999974 4 89999999999999999986 3 899999999999999999974 8999999999999
Q ss_pred CCCCCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccccCCCCccc-ccccceeccCCCCC
Q 002238 148 NNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSG-SQIQSLWVNGQNGN 226 (948)
Q Consensus 148 ~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~l~~l~~~~~~~~ 226 (948)
+|++++ ++ +.++++|++|++++|+..+.+ .++ .+++|++|+|++|++++ +| +.. ..++.|++.++...
T Consensus 136 ~N~l~~--l~--l~~l~~L~~L~l~~n~~~~~~--~~~--~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~ 204 (457)
T 3bz5_A 136 RNTLTE--ID--VSHNTQLTELDCHLNKKITKL--DVT--PQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNIT 204 (457)
T ss_dssp TSCCSC--CC--CTTCTTCCEEECTTCSCCCCC--CCT--TCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCS
T ss_pred CCccce--ec--cccCCcCCEEECCCCCccccc--ccc--cCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCC
Confidence 999996 43 889999999999999776666 344 79999999999999997 44 332 45777776655433
Q ss_pred CccCCCccccccCCCccEEEccCCcccccCCCCCCCCCCcEEeccCCccccccchhhhCCC-------CCcEEEcccCcc
Q 002238 227 AKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLE-------SLKIVNMTNNLL 299 (948)
Q Consensus 227 ~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~-------~L~~L~Ls~N~l 299 (948)
.. .+.++++|+.|+|++|++++ +| +..+++|+.|+|++|++++..+..+.++. +|+.|++++|.+
T Consensus 205 ~~------~l~~l~~L~~L~Ls~N~l~~-ip-~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~ 276 (457)
T 3bz5_A 205 KL------DLNQNIQLTFLDCSSNKLTE-ID-VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQ 276 (457)
T ss_dssp CC------CCTTCTTCSEEECCSSCCSC-CC-CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTT
T ss_pred ee------ccccCCCCCEEECcCCcccc-cC-ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCcc
Confidence 32 37889999999999999998 45 88899999999999999986655555544 556667777776
Q ss_pred cccCCCCCCccccccccccCCCCCCCCCCCchhhhhhHHHHHhhCCcchhccccCCCCCCCCccceeecCCceEEEEccC
Q 002238 300 QGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQK 379 (948)
Q Consensus 300 ~g~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~ 379 (948)
.|.+| +..+.+|..++..+|............+.. + .+...++|+.|++++
T Consensus 277 ~~~~~-~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~---------------------------L-~l~~~~~L~~L~L~~ 327 (457)
T 3bz5_A 277 LIYFQ-AEGCRKIKELDVTHNTQLYLLDCQAAGITE---------------------------L-DLSQNPKLVYLYLNN 327 (457)
T ss_dssp CCEEE-CTTCTTCCCCCCTTCTTCCEEECTTCCCSC---------------------------C-CCTTCTTCCEEECTT
T ss_pred CCccc-ccccccCCEEECCCCcccceeccCCCcceE---------------------------e-chhhcccCCEEECCC
Confidence 66666 455667777776666432221110000000 0 123446899999999
Q ss_pred CcccccCCccccCccccceEeCccccccc
Q 002238 380 MNLTGTISPEFASFKSLQRLILADNNLSG 408 (948)
Q Consensus 380 n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g 408 (948)
|++++. + ++++++|+.|+|++|+|++
T Consensus 328 N~l~~l-~--l~~l~~L~~L~l~~N~l~~ 353 (457)
T 3bz5_A 328 TELTEL-D--VSHNTKLKSLSCVNAHIQD 353 (457)
T ss_dssp CCCSCC-C--CTTCTTCSEEECCSSCCCB
T ss_pred Cccccc-c--cccCCcCcEEECCCCCCCC
Confidence 999994 3 9999999999999999996
No 295
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.96 E-value=1.3e-28 Score=297.88 Aligned_cols=329 Identities=16% Similarity=0.161 Sum_probs=240.4
Q ss_pred CCEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEc
Q 002238 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEI 146 (948)
Q Consensus 68 ~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 146 (948)
.+++.|+|++|+|++..+.+|.++++|++|+|++|+|++.++ .|.++++|++|+|++|+|+++++..|+++++|++|+|
T Consensus 76 ~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~L 155 (635)
T 4g8a_A 76 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 155 (635)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeecc
Confidence 589999999999998888899999999999999999999877 6899999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCccccCCCCCCEEEccCccccccCCCCCCC----------------------------------------
Q 002238 147 DNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGP---------------------------------------- 186 (948)
Q Consensus 147 s~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~---------------------------------------- 186 (948)
++|+++.+.+|..+..+++|++|++++|+|++..+..|..
T Consensus 156 s~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n~ 235 (635)
T 4g8a_A 156 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNF 235 (635)
T ss_dssp CSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCC
T ss_pred ccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccccchhhhhhhhhccc
Confidence 9999998778999999999999999999998765543310
Q ss_pred --------------------------------------------------------------------------------
Q 002238 187 -------------------------------------------------------------------------------- 186 (948)
Q Consensus 187 -------------------------------------------------------------------------------- 186 (948)
T Consensus 236 ~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~ 315 (635)
T 4g8a_A 236 DSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVS 315 (635)
T ss_dssp SSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEES
T ss_pred ccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcccccccccc
Confidence
Q ss_pred ---------CCCCCCcEEEcccccccccCCCCccc-----------------ccccceeccCCCCCCccC--C-------
Q 002238 187 ---------DEFPGLTILHLAFNQLIGGLPASFSG-----------------SQIQSLWVNGQNGNAKLG--G------- 231 (948)
Q Consensus 187 ---------~~l~~L~~L~Ls~N~l~~~~p~~~~~-----------------~~l~~l~~~~~~~~~~~~--~------- 231 (948)
.....|+.|++.+|++.+..+..+.. ..+..|...+...|.... .
T Consensus 316 ~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~ 395 (635)
T 4g8a_A 316 VTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFG 395 (635)
T ss_dssp CEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHHHHS
T ss_pred cccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccccccccchhhccccccccccccchhh
Confidence 00112333444444333222111100 011122222222222211 1
Q ss_pred ----------------CccccccCCCccEEEccCCcccccCC--CCCCCCCCcEEeccCCccccccchhhhCCCCCcEEE
Q 002238 232 ----------------GIDVIQNMTSLKEIWLHSNAFSGPLP--DFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVN 293 (948)
Q Consensus 232 ----------------~~~~l~~l~~L~~L~Ls~N~l~~~~~--~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 293 (948)
....+..+++|+.++++.|++....+ .+..+.+++.++++.|.+.+..|..+..+++|+.|+
T Consensus 396 ~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~ 475 (635)
T 4g8a_A 396 TISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLK 475 (635)
T ss_dssp CSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEE
T ss_pred hhhhhhhhccccccccccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhh
Confidence 11233455566666666666555433 356677777777777777777777777777777777
Q ss_pred cccCccc-ccCCC-CCCccccccccccCCCCCCCCCCCchhhhhhHHHHHhhCCcchhccccCCCCCCCCccceeecCCc
Q 002238 294 MTNNLLQ-GPVPE-FDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGN 371 (948)
Q Consensus 294 Ls~N~l~-g~~p~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (948)
|++|++. +.+|. +..+.+|..+++.+|....++. ..+..+++
T Consensus 476 Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~------------------------------------~~f~~l~~ 519 (635)
T 4g8a_A 476 MAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSP------------------------------------TAFNSLSS 519 (635)
T ss_dssp CTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECT------------------------------------TTTTTCTT
T ss_pred hhhcccccccCchhhhhccccCEEECCCCccCCcCh------------------------------------HHHcCCCC
Confidence 7777643 34443 5566667777666665433321 12446679
Q ss_pred eEEEEccCCcccccCCccccCccccceEeCccccccccCCcCCcCC-CCCcEEEccCCcccC
Q 002238 372 ITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVL-GALKELDVSNNQLYG 432 (948)
Q Consensus 372 L~~L~ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l-~~L~~L~ls~N~l~g 432 (948)
|+.|+|++|+|++..|..|.++++|++|+|++|+|++..|..+..+ ++|++|+|++|+++.
T Consensus 520 L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C 581 (635)
T 4g8a_A 520 LQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 581 (635)
T ss_dssp CCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCC
T ss_pred CCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcc
Confidence 9999999999999999999999999999999999999999999998 689999999999986
No 296
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=4.7e-28 Score=279.67 Aligned_cols=246 Identities=24% Similarity=0.275 Sum_probs=192.0
Q ss_pred EEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEccCCC
Q 002238 72 RIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNP 150 (948)
Q Consensus 72 ~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 150 (948)
.++.++++++ .+|..+. ++|++|+|++|+|++..+ .|.++++|++|+|++|.|+++++..|.++++|++|+|++|+
T Consensus 58 ~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~ 134 (452)
T 3zyi_A 58 KVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNW 134 (452)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCc
Confidence 4555666776 6776665 689999999999999776 79999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccccCCCCcccccccceeccCCCCCCccC
Q 002238 151 FSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLG 230 (948)
Q Consensus 151 l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~~~~ 230 (948)
++. ..+..+..+++|++|+|++|+|+...+..|. .+++|++|+|++|+..+.++...
T Consensus 135 l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~l~~~~~l~~i~~~~-------------------- 191 (452)
T 3zyi_A 135 LTV-IPSGAFEYLSKLRELWLRNNPIESIPSYAFN--RVPSLMRLDLGELKKLEYISEGA-------------------- 191 (452)
T ss_dssp CSB-CCTTTSSSCTTCCEEECCSCCCCEECTTTTT--TCTTCCEEECCCCTTCCEECTTT--------------------
T ss_pred CCc-cChhhhcccCCCCEEECCCCCcceeCHhHHh--cCCcccEEeCCCCCCccccChhh--------------------
Confidence 984 3345588899999999999999877777776 88899999998855444444321
Q ss_pred CCccccccCCCccEEEccCCcccccCCCCCCCCCCcEEeccCCccccccchhhhCCCCCcEEEcccCcccccCCCCCCcc
Q 002238 231 GGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSV 310 (948)
Q Consensus 231 ~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~ 310 (948)
|.++++|++|+|++|++++. |.+..+++|+.|+|++|+|++..|..|.++++|+.|+|++|++++..
T Consensus 192 -----~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~------- 258 (452)
T 3zyi_A 192 -----FEGLFNLKYLNLGMCNIKDM-PNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIE------- 258 (452)
T ss_dssp -----TTTCTTCCEEECTTSCCSSC-CCCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEEC-------
T ss_pred -----ccCCCCCCEEECCCCccccc-ccccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceEC-------
Confidence 34678888888888888754 56777778888888888888777777777777777777777766433
Q ss_pred ccccccccCCCCCCCCCCCchhhhhhHHHHHhhCCcchhccccCCCCCCCCccceeecCCceEEEEccCCcccccCCccc
Q 002238 311 SLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEF 390 (948)
Q Consensus 311 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~g~ip~~~ 390 (948)
|..|
T Consensus 259 ----------------------------------------------------------------------------~~~~ 262 (452)
T 3zyi_A 259 ----------------------------------------------------------------------------RNAF 262 (452)
T ss_dssp ----------------------------------------------------------------------------TTTT
T ss_pred ----------------------------------------------------------------------------HHHh
Confidence 3456
Q ss_pred cCccccceEeCccccccccCCcCCcCCCCCcEEEccCCcccC
Q 002238 391 ASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYG 432 (948)
Q Consensus 391 ~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g 432 (948)
.++++|+.|+|++|+|++..+..+..+++|+.|+|++|++..
T Consensus 263 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 263 DGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp TTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEEC
T ss_pred cCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCC
Confidence 667778888888888876666677778888888888777654
No 297
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=4.9e-28 Score=278.49 Aligned_cols=247 Identities=21% Similarity=0.295 Sum_probs=189.0
Q ss_pred EEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEccCC
Q 002238 71 TRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNN 149 (948)
Q Consensus 71 ~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 149 (948)
..++..+++++ .+|..+. ++|+.|+|++|+|++..+ .|.++++|++|+|++|.|+++++..|.++++|++|+|++|
T Consensus 46 ~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n 122 (440)
T 3zyj_A 46 SKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDN 122 (440)
T ss_dssp CEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCC
Confidence 35666677777 7777665 689999999999998776 7999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccccCCCCcccccccceeccCCCCCCcc
Q 002238 150 PFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKL 229 (948)
Q Consensus 150 ~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~~~ 229 (948)
+++. ..+..+..+++|++|+|++|+|+...+..|. .+++|++|+|++|+..+.++...
T Consensus 123 ~l~~-~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~--~l~~L~~L~l~~~~~l~~i~~~~------------------- 180 (440)
T 3zyj_A 123 RLTT-IPNGAFVYLSKLKELWLRNNPIESIPSYAFN--RIPSLRRLDLGELKRLSYISEGA------------------- 180 (440)
T ss_dssp CCSS-CCTTTSCSCSSCCEEECCSCCCCEECTTTTT--TCTTCCEEECCCCTTCCEECTTT-------------------
T ss_pred cCCe-eCHhHhhccccCceeeCCCCcccccCHHHhh--hCcccCEeCCCCCCCcceeCcch-------------------
Confidence 9984 2344688888999999999988877777776 78888888888855444444321
Q ss_pred CCCccccccCCCccEEEccCCcccccCCCCCCCCCCcEEeccCCccccccchhhhCCCCCcEEEcccCcccccCCCCCCc
Q 002238 230 GGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRS 309 (948)
Q Consensus 230 ~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~ 309 (948)
|.++++|++|+|++|+++. +|.+..+++|+.|+|++|+|++..|..|.++++|+.|+|++|++++
T Consensus 181 ------~~~l~~L~~L~L~~n~l~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~-------- 245 (440)
T 3zyj_A 181 ------FEGLSNLRYLNLAMCNLRE-IPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQV-------- 245 (440)
T ss_dssp ------TTTCSSCCEEECTTSCCSS-CCCCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCE--------
T ss_pred ------hhcccccCeecCCCCcCcc-ccccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeE--------
Confidence 3467778888888887773 4556666777777777777776666666666666666666666654
Q ss_pred cccccccccCCCCCCCCCCCchhhhhhHHHHHhhCCcchhccccCCCCCCCCccceeecCCceEEEEccCCcccccCCcc
Q 002238 310 VSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPE 389 (948)
Q Consensus 310 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~g~ip~~ 389 (948)
..+..
T Consensus 246 ---------------------------------------------------------------------------~~~~~ 250 (440)
T 3zyj_A 246 ---------------------------------------------------------------------------IERNA 250 (440)
T ss_dssp ---------------------------------------------------------------------------ECTTS
T ss_pred ---------------------------------------------------------------------------EChhh
Confidence 34445
Q ss_pred ccCccccceEeCccccccccCCcCCcCCCCCcEEEccCCcccC
Q 002238 390 FASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYG 432 (948)
Q Consensus 390 ~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g 432 (948)
|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|++..
T Consensus 251 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 251 FDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNC 293 (440)
T ss_dssp STTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEEC
T ss_pred hcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccC
Confidence 6777788888888888886666777888888888888887753
No 298
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.96 E-value=3.1e-28 Score=279.91 Aligned_cols=326 Identities=21% Similarity=0.224 Sum_probs=176.9
Q ss_pred CCEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC-CcCCC--------------------------------
Q 002238 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGL-------------------------------- 114 (948)
Q Consensus 68 ~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l-------------------------------- 114 (948)
.++++|++++|++ |.+|++++++++|++|++++|.+.|.+| +++.+
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~lp~~ 89 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLPEL 89 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCCCSC
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccCCCC
Confidence 3555566666666 4566666666666655555555555444 34443
Q ss_pred -CCCcEEEcccccccCCCCccccCCCCCCEEEccCCCCCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCc
Q 002238 115 -ASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLT 193 (948)
Q Consensus 115 -~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~ 193 (948)
++|++|+|++|.+++++. .+++|+.|+|++|++++ +|.. .++|++|++++|++++ +| .|+ .+++|+
T Consensus 90 ~~~L~~L~l~~n~l~~lp~----~~~~L~~L~l~~n~l~~--l~~~---~~~L~~L~L~~n~l~~-lp-~~~--~l~~L~ 156 (454)
T 1jl5_A 90 PPHLESLVASCNSLTELPE----LPQSLKSLLVDNNNLKA--LSDL---PPLLEYLGVSNNQLEK-LP-ELQ--NSSFLK 156 (454)
T ss_dssp CTTCSEEECCSSCCSSCCC----CCTTCCEEECCSSCCSC--CCSC---CTTCCEEECCSSCCSS-CC-CCT--TCTTCC
T ss_pred cCCCCEEEccCCcCCcccc----ccCCCcEEECCCCccCc--ccCC---CCCCCEEECcCCCCCC-Cc-ccC--CCCCCC
Confidence 345555555555555332 13566666666666653 3321 1578888888888876 55 355 788888
Q ss_pred EEEcccccccccCCCCcccccccceeccCCCCCCccCCCccccccCCCccEEEccCCcccccCCCCCCCCCCcEEeccCC
Q 002238 194 ILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDN 273 (948)
Q Consensus 194 ~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N 273 (948)
+|++++|++++ +|..+ .+++.|++.++.... .+ .+.++++|++|++++|++++. |.+ ..+|+.|++++|
T Consensus 157 ~L~l~~N~l~~-lp~~~--~~L~~L~L~~n~l~~----l~-~~~~l~~L~~L~l~~N~l~~l-~~~--~~~L~~L~l~~n 225 (454)
T 1jl5_A 157 IIDVDNNSLKK-LPDLP--PSLEFIAAGNNQLEE----LP-ELQNLPFLTAIYADNNSLKKL-PDL--PLSLESIVAGNN 225 (454)
T ss_dssp EEECCSSCCSC-CCCCC--TTCCEEECCSSCCSS----CC-CCTTCTTCCEEECCSSCCSSC-CCC--CTTCCEEECCSS
T ss_pred EEECCCCcCcc-cCCCc--ccccEEECcCCcCCc----Cc-cccCCCCCCEEECCCCcCCcC-CCC--cCcccEEECcCC
Confidence 88888888875 55544 356666666543332 22 477888888888888888763 322 257888888888
Q ss_pred ccccccchhhhCCCCCcEEEcccCcccccCCCCCCccccccccccCCCCCCCCCCCchhhhhhHHHHHhhCCcchhcccc
Q 002238 274 FFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENW 353 (948)
Q Consensus 274 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 353 (948)
.++ .+|. ++.+++|+.|++++|++++..+.+ .+|..++..+|....++... ..+.. .+.
T Consensus 226 ~l~-~lp~-~~~l~~L~~L~l~~N~l~~l~~~~---~~L~~L~l~~N~l~~l~~~~-~~L~~---------------L~l 284 (454)
T 1jl5_A 226 ILE-ELPE-LQNLPFLTTIYADNNLLKTLPDLP---PSLEALNVRDNYLTDLPELP-QSLTF---------------LDV 284 (454)
T ss_dssp CCS-SCCC-CTTCTTCCEEECCSSCCSSCCSCC---TTCCEEECCSSCCSCCCCCC-TTCCE---------------EEC
T ss_pred cCC-cccc-cCCCCCCCEEECCCCcCCcccccc---cccCEEECCCCcccccCccc-CcCCE---------------EEC
Confidence 887 6774 778888888888888887633322 44555555555554443221 11110 011
Q ss_pred CCCCCCCCccceeecCCceEEEEccCCcccccCCccccCc-cccceEeCccccccccCCcCCcCCCCCcEEEccCCcccC
Q 002238 354 KGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASF-KSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYG 432 (948)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~g~ip~~~~~l-~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g 432 (948)
.++... +.....++|+.|++++|.+++ +..+ ++|+.|+|++|++++ +|.. +++|++|++++|++++
T Consensus 285 s~N~l~----~l~~~~~~L~~L~l~~N~l~~-----i~~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~ 351 (454)
T 1jl5_A 285 SENIFS----GLSELPPNLYYLNASSNEIRS-----LCDLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE 351 (454)
T ss_dssp CSSCCS----EESCCCTTCCEEECCSSCCSE-----ECCCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC
T ss_pred cCCccC----cccCcCCcCCEEECcCCcCCc-----ccCCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc
Confidence 111000 000011356666666666664 1223 467777777777774 5544 4677777777777775
Q ss_pred CCCCCCcccccccCCCCCCC
Q 002238 433 KIPSFKSNAIVNTDGNPDIG 452 (948)
Q Consensus 433 ~ip~~~~~~~~~~~gnp~~~ 452 (948)
..+.......+.+++|+..+
T Consensus 352 lp~~l~~L~~L~L~~N~l~~ 371 (454)
T 1jl5_A 352 VPELPQNLKQLHVEYNPLRE 371 (454)
T ss_dssp CCCCCTTCCEEECCSSCCSS
T ss_pred ccchhhhccEEECCCCCCCc
Confidence 32223345566677776554
No 299
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=2.8e-28 Score=266.36 Aligned_cols=250 Identities=21% Similarity=0.296 Sum_probs=169.3
Q ss_pred CCccceEEeCCCCEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEcccccccCCC--Cc
Q 002238 57 CKWNHVVCIEDKRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVP--SD 133 (948)
Q Consensus 57 C~w~gv~c~~~~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~--~~ 133 (948)
|.|.+|.|. +++++ .+|..+. ++|++|+|++|+|+..++ .|.++++|++|+|++|.++... +.
T Consensus 7 C~~~~l~c~-----------~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 72 (306)
T 2z66_A 7 CSGTEIRCN-----------SKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQ 72 (306)
T ss_dssp EETTEEECC-----------SSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEH
T ss_pred eCCCEEEcC-----------CCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCccc
Confidence 667777664 34455 5665444 688899999998887666 3778888888888888887542 45
Q ss_pred cccCCCCCCEEEccCCCCCCCCCCccccCCCCCCEEEccCccccccCC-CCCCCCCCCCCcEEEcccccccccCCCCccc
Q 002238 134 FFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIP-SFFGPDEFPGLTILHLAFNQLIGGLPASFSG 212 (948)
Q Consensus 134 ~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p-~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 212 (948)
.+..+++|++|+|++|.++ .+|..+..+++|++|++++|++++..+ ..+. .+++|++|+|++|++.+..+..+
T Consensus 73 ~~~~~~~L~~L~Ls~n~i~--~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~--~l~~L~~L~l~~n~l~~~~~~~~-- 146 (306)
T 2z66_A 73 SDFGTTSLKYLDLSFNGVI--TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFL--SLRNLIYLDISHTHTRVAFNGIF-- 146 (306)
T ss_dssp HHHSCSCCCEEECCSCSEE--EEEEEEETCTTCCEEECTTSEEESSTTTTTTT--TCTTCCEEECTTSCCEECSTTTT--
T ss_pred ccccccccCEEECCCCccc--cChhhcCCCCCCCEEECCCCcccccccchhhh--hccCCCEEECCCCcCCccchhhc--
Confidence 5667888888888888887 567777777777777777777776554 4454 66777777777777665555443
Q ss_pred ccccceeccCCCCCCccCCCccccccCCCccEEEccCCcccc-cCC-CCCCCCCCcEEeccCCccccccchhhhCCCCCc
Q 002238 213 SQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSG-PLP-DFSGVKQLESLSLRDNFFTGPVPDSLVKLESLK 290 (948)
Q Consensus 213 ~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~-~~~-~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 290 (948)
.++++|++|+|++|.+++ .+| .+..+++|+.|+|++|++++..|..+..+++|+
T Consensus 147 ------------------------~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 202 (306)
T 2z66_A 147 ------------------------NGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQ 202 (306)
T ss_dssp ------------------------TTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred ------------------------ccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCC
Confidence 245666666666666654 222 355555566666666665555555555555555
Q ss_pred EEEcccCcccccCCCCCCccccccccccCCCCCCCCCCCchhhhhhHHHHHhhCCcchhccccCCCCCCCCccceeecCC
Q 002238 291 IVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKG 370 (948)
Q Consensus 291 ~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (948)
.|+|++|+++
T Consensus 203 ~L~L~~N~l~---------------------------------------------------------------------- 212 (306)
T 2z66_A 203 VLNMSHNNFF---------------------------------------------------------------------- 212 (306)
T ss_dssp EEECTTSCCS----------------------------------------------------------------------
T ss_pred EEECCCCccC----------------------------------------------------------------------
Confidence 5555555554
Q ss_pred ceEEEEccCCcccccCCccccCccccceEeCccccccccCCcCCcCCC-CCcEEEccCCcccCC
Q 002238 371 NITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLG-ALKELDVSNNQLYGK 433 (948)
Q Consensus 371 ~L~~L~ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~-~L~~L~ls~N~l~g~ 433 (948)
+..+..|..+++|+.|+|++|++++..|..+..++ +|++|+|++|++++.
T Consensus 213 -------------~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 213 -------------SLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp -------------BCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECS
T ss_pred -------------ccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecc
Confidence 44444566677788888888888877777777774 788888888887764
No 300
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.96 E-value=6.5e-28 Score=266.66 Aligned_cols=277 Identities=20% Similarity=0.272 Sum_probs=231.0
Q ss_pred CCccceEEeCC----------CCEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEcccc
Q 002238 57 CKWNHVVCIED----------KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNN 125 (948)
Q Consensus 57 C~w~gv~c~~~----------~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N 125 (948)
|.|..+.|... .+++.|+|++|++++..|..|.++++|++|+|++|.|++..| .|.++++|++|+|++|
T Consensus 33 c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 112 (332)
T 2ft3_A 33 CHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKN 112 (332)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSS
T ss_pred ccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCC
Confidence 68999999642 479999999999998888899999999999999999999877 7999999999999999
Q ss_pred cccCCCCccccCCCCCCEEEccCCCCCCCCCCccccCCCCCCEEEccCcccc--ccCCCCCCCCCCCCCcEEEccccccc
Q 002238 126 QFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANIT--GQIPSFFGPDEFPGLTILHLAFNQLI 203 (948)
Q Consensus 126 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~--~~~p~~~~~~~l~~L~~L~Ls~N~l~ 203 (948)
+++.+++..+ ++|++|+|++|+++. ..+..+.++++|+.|++++|.++ +..+..+. .+ +|++|++++|+++
T Consensus 113 ~l~~l~~~~~---~~L~~L~l~~n~i~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~--~l-~L~~L~l~~n~l~ 185 (332)
T 2ft3_A 113 HLVEIPPNLP---SSLVELRIHDNRIRK-VPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFD--GL-KLNYLRISEAKLT 185 (332)
T ss_dssp CCCSCCSSCC---TTCCEEECCSSCCCC-CCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSC--SC-CCSCCBCCSSBCS
T ss_pred cCCccCcccc---ccCCEEECCCCccCc-cCHhHhCCCccCCEEECCCCccccCCCCccccc--CC-ccCEEECcCCCCC
Confidence 9998877654 899999999999995 33456899999999999999996 47777776 56 9999999999998
Q ss_pred ccCCCCcccccccceeccCCCCCCccCCCccccccCCCccEEEccCCcccccCC-CCCCCCCCcEEeccCCccccccchh
Q 002238 204 GGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGPVPDS 282 (948)
Q Consensus 204 ~~~p~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~ 282 (948)
+ +|..+ .++|++|+|++|++++..+ .+..+++|+.|+|++|++++..|..
T Consensus 186 ~-l~~~~----------------------------~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~ 236 (332)
T 2ft3_A 186 G-IPKDL----------------------------PETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGS 236 (332)
T ss_dssp S-CCSSS----------------------------CSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTG
T ss_pred c-cCccc----------------------------cCCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhH
Confidence 5 66543 2688899999999998775 5888899999999999999877788
Q ss_pred hhCCCCCcEEEcccCcccccCCCCCCccccccccccCCCCCCCCCCCchhhhhhHHHHHhhCCcchhccccCCCCCCCCc
Q 002238 283 LVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDW 362 (948)
Q Consensus 283 l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (948)
+..+++|+.|+|++|+++ .+|.
T Consensus 237 ~~~l~~L~~L~L~~N~l~-~lp~--------------------------------------------------------- 258 (332)
T 2ft3_A 237 LSFLPTLRELHLDNNKLS-RVPA--------------------------------------------------------- 258 (332)
T ss_dssp GGGCTTCCEEECCSSCCC-BCCT---------------------------------------------------------
T ss_pred hhCCCCCCEEECCCCcCe-ecCh---------------------------------------------------------
Confidence 999999999999999987 3442
Q ss_pred cceeecCCceEEEEccCCcccccCCccccCc------cccceEeCcccccc--ccCCcCCcCCCCCcEEEccCCc
Q 002238 363 IGVTCTKGNITVINFQKMNLTGTISPEFASF------KSLQRLILADNNLS--GMIPEGLSVLGALKELDVSNNQ 429 (948)
Q Consensus 363 ~~~~~~~~~L~~L~ls~n~l~g~ip~~~~~l------~~L~~L~Ls~N~l~--g~ip~~l~~l~~L~~L~ls~N~ 429 (948)
.+..+++|+.|++++|.+++..+..|..+ +.|+.|+|++|.+. +..|..|..+++|+.|++++|+
T Consensus 259 --~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 259 --GLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp --TGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred --hhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 01234578889999999988777777653 67899999999887 6778889999999999999885
No 301
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.95 E-value=4.8e-27 Score=269.98 Aligned_cols=308 Identities=24% Similarity=0.292 Sum_probs=184.0
Q ss_pred CCEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCCCcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEcc
Q 002238 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEID 147 (948)
Q Consensus 68 ~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 147 (948)
.+++.|++++|.+++ +|.. +++|++|++++|++++... + .++|++|+|++|++++++ .|+++++|++|+++
T Consensus 91 ~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l~~-~--~~~L~~L~L~~n~l~~lp--~~~~l~~L~~L~l~ 161 (454)
T 1jl5_A 91 PHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKALSD-L--PPLLEYLGVSNNQLEKLP--ELQNSSFLKIIDVD 161 (454)
T ss_dssp TTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCCCS-C--CTTCCEEECCSSCCSSCC--CCTTCTTCCEEECC
T ss_pred CCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcccC-C--CCCCCEEECcCCCCCCCc--ccCCCCCCCEEECC
Confidence 467888888888886 6643 3678888888888876432 2 168888888888888854 48888888888888
Q ss_pred CCCCCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccccCCCCcccccccceeccCCCCCC
Q 002238 148 NNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNA 227 (948)
Q Consensus 148 ~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~ 227 (948)
+|++++ +|..+ .+|++|++++|++++ +| .++ .+++|++|++++|++++ +|... ..++.|++.++...
T Consensus 162 ~N~l~~--lp~~~---~~L~~L~L~~n~l~~-l~-~~~--~l~~L~~L~l~~N~l~~-l~~~~--~~L~~L~l~~n~l~- 228 (454)
T 1jl5_A 162 NNSLKK--LPDLP---PSLEFIAAGNNQLEE-LP-ELQ--NLPFLTAIYADNNSLKK-LPDLP--LSLESIVAGNNILE- 228 (454)
T ss_dssp SSCCSC--CCCCC---TTCCEEECCSSCCSS-CC-CCT--TCTTCCEEECCSSCCSS-CCCCC--TTCCEEECCSSCCS-
T ss_pred CCcCcc--cCCCc---ccccEEECcCCcCCc-Cc-ccc--CCCCCCEEECCCCcCCc-CCCCc--CcccEEECcCCcCC-
Confidence 888884 56543 488888888888887 45 455 78888888888888885 45433 35677776654333
Q ss_pred ccCCCccccccCCCccEEEccCCcccccCCCCCCCCCCcEEeccCCccccccchhhhCCCCCcEEEcccCcccccCCCCC
Q 002238 228 KLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFD 307 (948)
Q Consensus 228 ~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~ 307 (948)
..+ .+.++++|++|++++|++++.+. .+++|+.|++++|++++ +|.. +++|+.|++++|++++.. .+.
T Consensus 229 ---~lp-~~~~l~~L~~L~l~~N~l~~l~~---~~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l~-~~~ 296 (454)
T 1jl5_A 229 ---ELP-ELQNLPFLTTIYADNNLLKTLPD---LPPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGLS-ELP 296 (454)
T ss_dssp ---SCC-CCTTCTTCCEEECCSSCCSSCCS---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEES-CCC
T ss_pred ---ccc-ccCCCCCCCEEECCCCcCCcccc---cccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCccc-CcC
Confidence 223 37788888888888888886432 23788888888888885 5653 367888888888888732 111
Q ss_pred CccccccccccCCCCCCCCCCCchhhhhhHHHHHhhCCcchhccccCCCCCCCCccceeecCCceEEEEccCCcccccCC
Q 002238 308 RSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTIS 387 (948)
Q Consensus 308 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~g~ip 387 (948)
.+|..++..+|....++.. ...+.. .+..++... +....+++|+.|++++|+++ .+|
T Consensus 297 --~~L~~L~l~~N~l~~i~~~-~~~L~~---------------L~Ls~N~l~----~lp~~~~~L~~L~L~~N~l~-~lp 353 (454)
T 1jl5_A 297 --PNLYYLNASSNEIRSLCDL-PPSLEE---------------LNVSNNKLI----ELPALPPRLERLIASFNHLA-EVP 353 (454)
T ss_dssp --TTCCEEECCSSCCSEECCC-CTTCCE---------------EECCSSCCS----CCCCCCTTCCEEECCSSCCS-CCC
T ss_pred --CcCCEEECcCCcCCcccCC-cCcCCE---------------EECCCCccc----cccccCCcCCEEECCCCccc-ccc
Confidence 2344444455543322210 000000 001111000 01111345666666666666 344
Q ss_pred ccccCccccceEeCccccccc--cCCcCCcCC-------------CCCcEEEccCCcccC--CCC
Q 002238 388 PEFASFKSLQRLILADNNLSG--MIPEGLSVL-------------GALKELDVSNNQLYG--KIP 435 (948)
Q Consensus 388 ~~~~~l~~L~~L~Ls~N~l~g--~ip~~l~~l-------------~~L~~L~ls~N~l~g--~ip 435 (948)
. .+++|++|+|++|++++ .+|.++..+ ++|++||+++|+++| .+|
T Consensus 354 ~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L~~n~~~~~i~~~~~~L~~L~ls~N~l~~~~~iP 415 (454)
T 1jl5_A 354 E---LPQNLKQLHVEYNPLREFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLREFPDIP 415 (454)
T ss_dssp C---CCTTCCEEECCSSCCSSCCCCCTTCCEEECCC-----------------------------
T ss_pred c---hhhhccEEECCCCCCCcCCCChHHHHhhhhcccccccccccCcCCEEECCCCcCCccccch
Confidence 4 35566666666666666 566666555 556666666666665 444
No 302
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=3.5e-29 Score=274.05 Aligned_cols=249 Identities=16% Similarity=0.199 Sum_probs=178.1
Q ss_pred ccCCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEccccccc-CCCCcccc-------CCCCCCEEEccCCCCCCCCCCc
Q 002238 88 LQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFT-SVPSDFFT-------GLSSLQSIEIDNNPFSSWEIPQ 158 (948)
Q Consensus 88 l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~-~~~~~~~~-------~l~~L~~L~Ls~N~l~~~~~p~ 158 (948)
++..++|++|++++|.+ .+| .+... |++|+|++|.++ ...+..+. ++++|++|+|++|++++ .+|.
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~ 113 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTG-TAPP 113 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBS-CCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccc-hhHH
Confidence 34556677777777777 333 34433 777777777774 33444443 67777777777777776 5666
Q ss_pred cc--cCCCCCCEEEccCccccccCCCCCCCCCC-----CCCcEEEcccccccccCCCCcccccccceeccCCCCCCccCC
Q 002238 159 SL--RNASGLQNFSANSANITGQIPSFFGPDEF-----PGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGG 231 (948)
Q Consensus 159 ~~--~~l~~L~~L~l~~n~l~~~~p~~~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~~~~~ 231 (948)
.+ ..+++|++|+|++|++++. |..++ .+ ++|++|+|++|++++..|..|
T Consensus 114 ~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~--~l~~~~~~~L~~L~L~~N~l~~~~~~~~--------------------- 169 (312)
T 1wwl_A 114 PLLEATGPDLNILNLRNVSWATR-DAWLA--ELQQWLKPGLKVLSIAQAHSLNFSCEQV--------------------- 169 (312)
T ss_dssp CSSSCCSCCCSEEEEESCBCSSS-SSHHH--HHHTTCCTTCCEEEEESCSCCCCCTTTC---------------------
T ss_pred HHHHhcCCCccEEEccCCCCcch-hHHHH--HHHHhhcCCCcEEEeeCCCCccchHHHh---------------------
Confidence 65 6777777777777777766 55554 44 778888888888876666554
Q ss_pred CccccccCCCccEEEccCCccccc---CCCC--CCCCCCcEEeccCCcccc--ccc-hhhhCCCCCcEEEcccCcccccC
Q 002238 232 GIDVIQNMTSLKEIWLHSNAFSGP---LPDF--SGVKQLESLSLRDNFFTG--PVP-DSLVKLESLKIVNMTNNLLQGPV 303 (948)
Q Consensus 232 ~~~~l~~l~~L~~L~Ls~N~l~~~---~~~~--~~l~~L~~L~L~~N~l~~--~~p-~~l~~l~~L~~L~Ls~N~l~g~~ 303 (948)
.++++|++|+|++|++.+. ++.+ ..+++|+.|+|++|+|++ .++ ..+.++++|+.|+|++|++++.+
T Consensus 170 -----~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 244 (312)
T 1wwl_A 170 -----RVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAA 244 (312)
T ss_dssp -----CCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSC
T ss_pred -----ccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCccc
Confidence 3677888888888887664 2233 678888888888888883 222 34467889999999999988765
Q ss_pred CCCCCccccccccccCCCCCCCCCCCchhhhhhHHHHHhhCCcchhccccCCCCCCCCccceeecCCceEEEEccCCccc
Q 002238 304 PEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLT 383 (948)
Q Consensus 304 p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~ 383 (948)
|.- .+..+++|+.|+|++|+++
T Consensus 245 ~~~----------------------------------------------------------~~~~l~~L~~L~Ls~N~l~ 266 (312)
T 1wwl_A 245 GAP----------------------------------------------------------SCDWPSQLNSLNLSFTGLK 266 (312)
T ss_dssp CCS----------------------------------------------------------CCCCCTTCCEEECTTSCCS
T ss_pred chh----------------------------------------------------------hhhhcCCCCEEECCCCccC
Confidence 420 0112347888999999988
Q ss_pred ccCCccccCccccceEeCccccccccCCcCCcCCCCCcEEEccCCcccCC
Q 002238 384 GTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGK 433 (948)
Q Consensus 384 g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~ 433 (948)
.+|..+. ++|++|+|++|+|++. |. +..+++|++|+|++|++++.
T Consensus 267 -~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~~ 311 (312)
T 1wwl_A 267 -QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLDS 311 (312)
T ss_dssp -SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTCC
T ss_pred -hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCCC
Confidence 7787776 8899999999999866 66 88999999999999998863
No 303
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=2e-27 Score=281.31 Aligned_cols=281 Identities=23% Similarity=0.288 Sum_probs=203.2
Q ss_pred CCC-CCCCCCccceEEe-------CCCCEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCCCcCCCCCCcEEE
Q 002238 50 GWS-DTDPCKWNHVVCI-------EDKRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLPSLNGLASLEVVM 121 (948)
Q Consensus 50 ~w~-~~~~C~w~gv~c~-------~~~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~ 121 (948)
.|. ..+||.|.|..|. ...+++.|++++|+++ .+|..+. ++|++|+|++|+|+.+++ .+++|++|+
T Consensus 14 ~W~~~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~lp~---~l~~L~~L~ 87 (622)
T 3g06_A 14 AWRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTSLPA---LPPELRTLE 87 (622)
T ss_dssp HHHHTCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSCCCC---CCTTCCEEE
T ss_pred HHHhcCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCCCCC---cCCCCCEEE
Confidence 564 4678999775331 1246899999999999 8888776 899999999999997554 678999999
Q ss_pred cccccccCCCCccccCCCCCCEEEccCCCCCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEccccc
Q 002238 122 LSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQ 201 (948)
Q Consensus 122 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~ 201 (948)
|++|+|++++. .+++|++|+|++|+++ .+|. .+++|+.|++++|+|++ +|. .+++|++|+|++|+
T Consensus 88 Ls~N~l~~lp~----~l~~L~~L~Ls~N~l~--~l~~---~l~~L~~L~L~~N~l~~-lp~-----~l~~L~~L~Ls~N~ 152 (622)
T 3g06_A 88 VSGNQLTSLPV----LPPGLLELSIFSNPLT--HLPA---LPSGLCKLWIFGNQLTS-LPV-----LPPGLQELSVSDNQ 152 (622)
T ss_dssp ECSCCCSCCCC----CCTTCCEEEECSCCCC--CCCC---CCTTCCEEECCSSCCSC-CCC-----CCTTCCEEECCSSC
T ss_pred cCCCcCCcCCC----CCCCCCEEECcCCcCC--CCCC---CCCCcCEEECCCCCCCc-CCC-----CCCCCCEEECcCCc
Confidence 99999998776 7899999999999999 4666 67899999999999986 444 35899999999999
Q ss_pred ccccCCCCcccccccceeccCCCCCCccCCCccccccCCCccEEEccCCcccccCCCCCCCCCCcEEeccCCccccccch
Q 002238 202 LIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPD 281 (948)
Q Consensus 202 l~~~~p~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~ 281 (948)
+++ +|..+ .+++.|++.++..... + ..+++|+.|+|++|++++.++. +++|+.|++++|.++ .+|.
T Consensus 153 l~~-l~~~~--~~L~~L~L~~N~l~~l----~---~~~~~L~~L~Ls~N~l~~l~~~---~~~L~~L~L~~N~l~-~l~~ 218 (622)
T 3g06_A 153 LAS-LPALP--SELCKLWAYNNQLTSL----P---MLPSGLQELSVSDNQLASLPTL---PSELYKLWAYNNRLT-SLPA 218 (622)
T ss_dssp CSC-CCCCC--TTCCEEECCSSCCSCC----C---CCCTTCCEEECCSSCCSCCCCC---CTTCCEEECCSSCCS-SCCC
T ss_pred CCC-cCCcc--CCCCEEECCCCCCCCC----c---ccCCCCcEEECCCCCCCCCCCc---cchhhEEECcCCccc-ccCC
Confidence 985 45432 2344444433222211 1 2334555555555555542221 245555555555555 3332
Q ss_pred hhhCCCCCcEEEcccCcccccCCCCCCccccccccccCCCCCCCCCCCchhhhhhHHHHHhhCCcchhccccCCCCCCCC
Q 002238 282 SLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSD 361 (948)
Q Consensus 282 ~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (948)
. +++|+.|+|++|+|++ +|.
T Consensus 219 ~---~~~L~~L~Ls~N~L~~-lp~-------------------------------------------------------- 238 (622)
T 3g06_A 219 L---PSGLKELIVSGNRLTS-LPV-------------------------------------------------------- 238 (622)
T ss_dssp C---CTTCCEEECCSSCCSC-CCC--------------------------------------------------------
T ss_pred C---CCCCCEEEccCCccCc-CCC--------------------------------------------------------
Confidence 1 2445555555555543 111
Q ss_pred ccceeecCCceEEEEccCCcccccCCccccCccccceEeCccccccccCCcCCcCCCCCcEEEccCCcccCCCCC
Q 002238 362 WIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPS 436 (948)
Q Consensus 362 ~~~~~~~~~~L~~L~ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~ip~ 436 (948)
.+++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|+|.+|.
T Consensus 239 ------~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~ 302 (622)
T 3g06_A 239 ------LPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQ 302 (622)
T ss_dssp ------CCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHH
T ss_pred ------CCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHH
Confidence 1247899999999998 4665 6789999999999999 8899999999999999999999988774
No 304
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=2.5e-27 Score=256.01 Aligned_cols=209 Identities=23% Similarity=0.351 Sum_probs=170.2
Q ss_pred eEEeCCCCEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEcccccccCCCCccccCCCC
Q 002238 62 VVCIEDKRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSS 140 (948)
Q Consensus 62 v~c~~~~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 140 (948)
..|.... .+.+++++++++ .+|..+ .++|++|+|++|.|++.++ .|..+++|++|+|++|.++++.+..|.++++
T Consensus 6 C~C~~~~-~~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~ 81 (285)
T 1ozn_A 6 CVCYNEP-KVTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLAL 81 (285)
T ss_dssp CEEECSS-SCEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTT
T ss_pred ceECCCC-CeEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccC
Confidence 3454332 367788888888 566554 4689999999999998776 6888999999999999999998899999999
Q ss_pred CCEEEccCCC-CCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccccCCCCccccccccee
Q 002238 141 LQSIEIDNNP-FSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLW 219 (948)
Q Consensus 141 L~~L~Ls~N~-l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~ 219 (948)
|++|+|++|+ +.. ..|..+..+++|++|++++|.+++..|..|. .+++|++|+|++|++++..+..|
T Consensus 82 L~~L~l~~n~~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~--~l~~L~~L~l~~n~l~~~~~~~~--------- 149 (285)
T 1ozn_A 82 LEQLDLSDNAQLRS-VDPATFHGLGRLHTLHLDRCGLQELGPGLFR--GLAALQYLYLQDNALQALPDDTF--------- 149 (285)
T ss_dssp CCEEECCSCTTCCC-CCTTTTTTCTTCCEEECTTSCCCCCCTTTTT--TCTTCCEEECCSSCCCCCCTTTT---------
T ss_pred CCEEeCCCCCCccc-cCHHHhcCCcCCCEEECCCCcCCEECHhHhh--CCcCCCEEECCCCcccccCHhHh---------
Confidence 9999999997 764 3477888899999999999999988888886 78899999999998885555443
Q ss_pred ccCCCCCCccCCCccccccCCCccEEEccCCcccccCCC-CCCCCCCcEEeccCCccccccchhhhCCCCCcEEEcccCc
Q 002238 220 VNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPD-FSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNL 298 (948)
Q Consensus 220 ~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 298 (948)
.++++|++|+|++|++++.++. +.++++|+.|+|++|.+++..|..+.++++|+.|+|++|+
T Consensus 150 -----------------~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 212 (285)
T 1ozn_A 150 -----------------RDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANN 212 (285)
T ss_dssp -----------------TTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred -----------------ccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCc
Confidence 3678888888888888876664 7778888888888888887778888888888888888888
Q ss_pred ccccC
Q 002238 299 LQGPV 303 (948)
Q Consensus 299 l~g~~ 303 (948)
+++.+
T Consensus 213 l~~~~ 217 (285)
T 1ozn_A 213 LSALP 217 (285)
T ss_dssp CSCCC
T ss_pred CCcCC
Confidence 87543
No 305
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=1.7e-28 Score=288.65 Aligned_cols=187 Identities=20% Similarity=0.173 Sum_probs=131.5
Q ss_pred eecccCceEEEEEE-EcCCcEEEEEEeecCcCC--------hhhHHHHHHHHHHHHhc-CCCceeeEEeEEEeCCceEEE
Q 002238 600 ILGRGGFGTVYKGE-LHDGTKIAVKRMEAGVIS--------GKGLTEFKSEIAVLTKV-RHRHLVALLGHCLDGNEKLLV 669 (948)
Q Consensus 600 ~lg~G~fg~Vy~~~-~~~g~~vavK~~~~~~~~--------~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv 669 (948)
..+.|++|.++.++ .-.|+.||||++.+.... ....++|.+|+++|+++ .|+||+++++++.+++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 35677777777664 336899999999765321 23346799999999999 799999999999999999999
Q ss_pred EEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceec
Q 002238 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (948)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~ 749 (948)
|||++|++|.+++.. ..+++.. +|+.||+.||+|+|+ +|||||||||+|||+++++.+||+|||+|+..
T Consensus 321 MEyv~G~~L~d~i~~-----~~~l~~~---~I~~QIl~AL~ylH~---~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~ 389 (569)
T 4azs_A 321 MEKLPGRLLSDMLAA-----GEEIDRE---KILGSLLRSLAALEK---QGFWHDDVRPWNVMVDARQHARLIDFGSIVTT 389 (569)
T ss_dssp EECCCSEEHHHHHHT-----TCCCCHH---HHHHHHHHHHHHHHH---TTCEESCCCGGGEEECTTSCEEECCCTTEESC
T ss_pred EecCCCCcHHHHHHh-----CCCCCHH---HHHHHHHHHHHHHHH---CCceeccCchHhEEECCCCCEEEeecccCeeC
Confidence 999999999999943 2456654 588999999999997 89999999999999999999999999999966
Q ss_pred CCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCC
Q 002238 750 PEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKA 799 (948)
Q Consensus 750 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p 799 (948)
..... .....+||++|||||++.+ .+..++|+||+|++++++.++..+
T Consensus 390 ~~~~~-~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 390 PQDCS-WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp C---C-CSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CCCCc-cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 54332 3445679999999999865 567789999999998887665433
No 306
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=4.5e-26 Score=243.85 Aligned_cols=217 Identities=23% Similarity=0.385 Sum_probs=193.8
Q ss_pred CCCCCccceEEeCCCCEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEcccccccCCCC
Q 002238 54 TDPCKWNHVVCIEDKRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPS 132 (948)
Q Consensus 54 ~~~C~w~gv~c~~~~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~ 132 (948)
.+.|.|.|+.|....+++.+++++++++ .+|..+. ++|++|+|++|+|++..+ .|.++++|++|+|++|.++.+++
T Consensus 2 ~~~C~~~~~~C~c~~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~ 78 (270)
T 2o6q_A 2 EALCKKDGGVCSCNNNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPA 78 (270)
T ss_dssp CCCBGGGTCSBEEETTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCT
T ss_pred CccCCCCCCCCEeCCCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeCh
Confidence 5789999999977677889999999999 5777665 689999999999999877 79999999999999999999999
Q ss_pred ccccCCCCCCEEEccCCCCCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccccCCCCccc
Q 002238 133 DFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSG 212 (948)
Q Consensus 133 ~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 212 (948)
..|.++++|++|+|++|+++. ..+..+..+++|++|++++|++++..+..|. .+++|++|+|++|++++..+..|
T Consensus 79 ~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~--~l~~L~~L~Ls~n~l~~~~~~~~-- 153 (270)
T 2o6q_A 79 GIFKELKNLETLWVTDNKLQA-LPIGVFDQLVNLAELRLDRNQLKSLPPRVFD--SLTKLTYLSLGYNELQSLPKGVF-- 153 (270)
T ss_dssp TTTSSCTTCCEEECCSSCCCC-CCTTTTTTCSSCCEEECCSSCCCCCCTTTTT--TCTTCCEEECCSSCCCCCCTTTT--
T ss_pred hhhcCCCCCCEEECCCCcCCc-CCHhHcccccCCCEEECCCCccCeeCHHHhC--cCcCCCEEECCCCcCCccCHhHc--
Confidence 999999999999999999995 3345678999999999999999999888887 89999999999999986555443
Q ss_pred ccccceeccCCCCCCccCCCccccccCCCccEEEccCCcccccCCC-CCCCCCCcEEeccCCccccccchhhhCCCCCcE
Q 002238 213 SQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPD-FSGVKQLESLSLRDNFFTGPVPDSLVKLESLKI 291 (948)
Q Consensus 213 ~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 291 (948)
.++++|++|+|++|++++.++. |.++++|+.|+|++|++++..+..+..+++|+.
T Consensus 154 ------------------------~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 209 (270)
T 2o6q_A 154 ------------------------DKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKM 209 (270)
T ss_dssp ------------------------TTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE
T ss_pred ------------------------cCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCE
Confidence 4789999999999999987774 888999999999999999776777999999999
Q ss_pred EEcccCccccc
Q 002238 292 VNMTNNLLQGP 302 (948)
Q Consensus 292 L~Ls~N~l~g~ 302 (948)
|+|++|++...
T Consensus 210 L~l~~N~~~c~ 220 (270)
T 2o6q_A 210 LQLQENPWDCT 220 (270)
T ss_dssp EECCSSCBCCS
T ss_pred EEecCCCeeCC
Confidence 99999998753
No 307
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.94 E-value=5.7e-26 Score=261.25 Aligned_cols=249 Identities=14% Similarity=0.163 Sum_probs=181.4
Q ss_pred CcEEEcccCCCCCCCCCcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEccCCCCCCCCCCccccCCCCCCEEEccC
Q 002238 94 LERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANS 173 (948)
Q Consensus 94 L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~ 173 (948)
...++.+++.++.++..+. ++++.|+|++|+|+++++..|.++++|++|+|++|+++. ..+..|.++++|++|+|++
T Consensus 45 ~~~v~c~~~~l~~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~-i~~~~~~~l~~L~~L~L~~ 121 (440)
T 3zyj_A 45 FSKVICVRKNLREVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRT-IEIGAFNGLANLNTLELFD 121 (440)
T ss_dssp SCEEECCSCCCSSCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCE-ECGGGGTTCSSCCEEECCS
T ss_pred CCEEEeCCCCcCcCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCc-cChhhccCCccCCEEECCC
Confidence 4578889999987766555 689999999999999999999999999999999999885 3346677777777777777
Q ss_pred ccccccCCCCCCCCCCCCCcEEEcccccccccCCCCcccccccceeccCCCCCCccCCCccccccCCCccEEEccCCccc
Q 002238 174 ANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFS 253 (948)
Q Consensus 174 n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~ 253 (948)
|+|+...+..|. .+++|++|+|++|+++...+..| .++++|++|+|++|+.
T Consensus 122 n~l~~~~~~~~~--~l~~L~~L~L~~N~i~~~~~~~~--------------------------~~l~~L~~L~l~~~~~- 172 (440)
T 3zyj_A 122 NRLTTIPNGAFV--YLSKLKELWLRNNPIESIPSYAF--------------------------NRIPSLRRLDLGELKR- 172 (440)
T ss_dssp SCCSSCCTTTSC--SCSSCCEEECCSCCCCEECTTTT--------------------------TTCTTCCEEECCCCTT-
T ss_pred CcCCeeCHhHhh--ccccCceeeCCCCcccccCHHHh--------------------------hhCcccCEeCCCCCCC-
Confidence 777766665665 66677777777776664333332 2455555555555322
Q ss_pred ccCCCCCCCCCCcEEeccCCccccccchhhhCCCCCcEEEcccCcccccCCCCCCccccccccccCCCCCCCCCCCchhh
Q 002238 254 GPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRL 333 (948)
Q Consensus 254 ~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 333 (948)
+....+..|.++++|++|+|++|+++. +|.+
T Consensus 173 ---------------------l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~~~--------------------------- 203 (440)
T 3zyj_A 173 ---------------------LSYISEGAFEGLSNLRYLNLAMCNLRE-IPNL--------------------------- 203 (440)
T ss_dssp ---------------------CCEECTTTTTTCSSCCEEECTTSCCSS-CCCC---------------------------
T ss_pred ---------------------cceeCcchhhcccccCeecCCCCcCcc-cccc---------------------------
Confidence 222222345555555555555555542 2211
Q ss_pred hhhHHHHHhhCCcchhccccCCCCCCCCccceeecCCceEEEEccCCcccccCCccccCccccceEeCccccccccCCcC
Q 002238 334 NALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEG 413 (948)
Q Consensus 334 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~ 413 (948)
..+++|+.|+|++|.+++..|..|.++++|+.|+|++|+|++..|..
T Consensus 204 ---------------------------------~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 250 (440)
T 3zyj_A 204 ---------------------------------TPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNA 250 (440)
T ss_dssp ---------------------------------TTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTS
T ss_pred ---------------------------------CCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhh
Confidence 11235667777777777777888999999999999999999999999
Q ss_pred CcCCCCCcEEEccCCcccCCCCC----CCcccccccCCCCCCCCccC
Q 002238 414 LSVLGALKELDVSNNQLYGKIPS----FKSNAIVNTDGNPDIGKEKS 456 (948)
Q Consensus 414 l~~l~~L~~L~ls~N~l~g~ip~----~~~~~~~~~~gnp~~~~~~~ 456 (948)
|..+++|++|||++|+|++.++. +.....+.+++|||.|.+..
T Consensus 251 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~l 297 (440)
T 3zyj_A 251 FDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCDI 297 (440)
T ss_dssp STTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSSTT
T ss_pred hcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCCCc
Confidence 99999999999999999987664 35567889999999998754
No 308
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.94 E-value=4.2e-27 Score=262.49 Aligned_cols=272 Identities=17% Similarity=0.189 Sum_probs=224.6
Q ss_pred CcEEEcccCCCCCCCCCcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEccCCCCCCCCCCccccCCCCCCEEEccC
Q 002238 94 LERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANS 173 (948)
Q Consensus 94 L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~ 173 (948)
....++++|.++.++..+. ++|++|+|++|.++++++..|.++++|++|+|++|++++ ..|..+.++++|++|++++
T Consensus 33 ~~~c~~~~~~l~~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~Ls~ 109 (353)
T 2z80_A 33 NGICKGSSGSLNSIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINT-IEEDSFSSLGSLEHLDLSY 109 (353)
T ss_dssp TSEEECCSTTCSSCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCE-ECTTTTTTCTTCCEEECCS
T ss_pred CeEeeCCCCCccccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCc-cCHhhcCCCCCCCEEECCC
Confidence 3457889999998766555 589999999999999999899999999999999999996 4467899999999999999
Q ss_pred ccccccCCCCCCCCCCCCCcEEEcccccccccCCC-CcccccccceeccCCCCCCccCCCccccccCCCccEEEccCCc-
Q 002238 174 ANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPA-SFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNA- 251 (948)
Q Consensus 174 n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~- 251 (948)
|++++..+..|. .+++|++|+|++|++++ +|. .. +.++++|++|++++|+
T Consensus 110 n~l~~~~~~~~~--~l~~L~~L~L~~n~l~~-l~~~~~-------------------------~~~l~~L~~L~l~~n~~ 161 (353)
T 2z80_A 110 NYLSNLSSSWFK--PLSSLTFLNLLGNPYKT-LGETSL-------------------------FSHLTKLQILRVGNMDT 161 (353)
T ss_dssp SCCSSCCHHHHT--TCTTCSEEECTTCCCSS-SCSSCS-------------------------CTTCTTCCEEEEEESSS
T ss_pred CcCCcCCHhHhC--CCccCCEEECCCCCCcc-cCchhh-------------------------hccCCCCcEEECCCCcc
Confidence 999977766676 89999999999999984 443 21 4578999999999994
Q ss_pred ccccCC-CCCCCCCCcEEeccCCccccccchhhhCCCCCcEEEcccCcccccCCCCCCccccccccccCCCCCCCCCCCc
Q 002238 252 FSGPLP-DFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACD 330 (948)
Q Consensus 252 l~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~~~~~~~~ 330 (948)
+....+ .+.++++|+.|++++|.+++..|..+.++++|++|++++|+++...+.
T Consensus 162 ~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~------------------------- 216 (353)
T 2z80_A 162 FTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEI------------------------- 216 (353)
T ss_dssp CCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHH-------------------------
T ss_pred ccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhh-------------------------
Confidence 666655 588899999999999999998899999999999999999998532211
Q ss_pred hhhhhhHHHHHhhCCcchhccccCCCCCCCCccceeecCCceEEEEccCCcccccCCcccc---CccccceEeCcccccc
Q 002238 331 PRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFA---SFKSLQRLILADNNLS 407 (948)
Q Consensus 331 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~g~ip~~~~---~l~~L~~L~Ls~N~l~ 407 (948)
.+..+++|+.|++++|.+++..+..+. ....++.++|++|+++
T Consensus 217 ----------------------------------~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~ 262 (353)
T 2z80_A 217 ----------------------------------FVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKIT 262 (353)
T ss_dssp ----------------------------------HHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCC
T ss_pred ----------------------------------hhhhcccccEEECCCCccccccccccccccccchhhcccccccccc
Confidence 111245899999999999987766554 3567888999999887
Q ss_pred c----cCCcCCcCCCCCcEEEccCCcccCCCCC----CCcccccccCCCCCCCCcc
Q 002238 408 G----MIPEGLSVLGALKELDVSNNQLYGKIPS----FKSNAIVNTDGNPDIGKEK 455 (948)
Q Consensus 408 g----~ip~~l~~l~~L~~L~ls~N~l~g~ip~----~~~~~~~~~~gnp~~~~~~ 455 (948)
+ .+|..+..+++|++|||++|+++..++. +.....+.+++||+.|.++
T Consensus 263 ~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 263 DESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp HHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 6 4788899999999999999999954332 3456788999999998765
No 309
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.94 E-value=2.1e-26 Score=253.37 Aligned_cols=253 Identities=15% Similarity=0.181 Sum_probs=193.9
Q ss_pred CCCCCCCCCCcc-ceEEeCCCCEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCCCcCCCCCCcEEEcccccc
Q 002238 49 LGWSDTDPCKWN-HVVCIEDKRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQF 127 (948)
Q Consensus 49 ~~w~~~~~C~w~-gv~c~~~~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l 127 (948)
..|.+..|-.+. .+......+|+.|+|++|+++ .+|+.++++++|++|+|++|.|+.++..+.++++|++|+|++|.+
T Consensus 61 ~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~Ls~n~l 139 (328)
T 4fcg_A 61 ETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLMELPDTMQQFAGLETLTLARNPL 139 (328)
T ss_dssp CCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCCCCCSCGGGGTTCSEEEEESCCC
T ss_pred cccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCccchhHHHhccCCCCEEECCCCcc
Confidence 378654432222 122234578999999999999 889999999999999999999995555799999999999999999
Q ss_pred cCCCCccccCCCCCCEEEccCCCCCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccccCC
Q 002238 128 TSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLP 207 (948)
Q Consensus 128 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p 207 (948)
+.+ |..|+++++|++|+|++|++.+ .+|..+... ..+..|. .+++|++|+|++|+++ .+|
T Consensus 140 ~~l-p~~l~~l~~L~~L~L~~n~~~~-~~p~~~~~~---------------~~~~~~~--~l~~L~~L~L~~n~l~-~lp 199 (328)
T 4fcg_A 140 RAL-PASIASLNRLRELSIRACPELT-ELPEPLAST---------------DASGEHQ--GLVNLQSLRLEWTGIR-SLP 199 (328)
T ss_dssp CCC-CGGGGGCTTCCEEEEEEETTCC-CCCSCSEEE---------------C-CCCEE--ESTTCCEEEEEEECCC-CCC
T ss_pred ccC-cHHHhcCcCCCEEECCCCCCcc-ccChhHhhc---------------cchhhhc--cCCCCCEEECcCCCcC-cch
Confidence 954 6679999999999999988877 788766541 1112233 5677777777777776 555
Q ss_pred CCcccccccceeccCCCCCCccCCCccccccCCCccEEEccCCcccccCCCCCCCCCCcEEeccCCccccccchhhhCCC
Q 002238 208 ASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLE 287 (948)
Q Consensus 208 ~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 287 (948)
..+ .++++|++|+|++|++++.++.+..+++|+.|+|++|++.+.+|..+..++
T Consensus 200 ~~l--------------------------~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~ 253 (328)
T 4fcg_A 200 ASI--------------------------ANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRA 253 (328)
T ss_dssp GGG--------------------------GGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCC
T ss_pred Hhh--------------------------cCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcchhhhHHHhcCCC
Confidence 443 367777777777777776666677777888888888888878888888888
Q ss_pred CCcEEEcccCcccccCCCCCCccccccccccCCCCCCCCCCCchhhhhhHHHHHhhCCcchhccccCCCCCCCCccceee
Q 002238 288 SLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTC 367 (948)
Q Consensus 288 ~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (948)
+|+.|+|++|++.+.+|.. +.
T Consensus 254 ~L~~L~L~~n~~~~~~p~~-----------------------------------------------------------~~ 274 (328)
T 4fcg_A 254 PLKRLILKDCSNLLTLPLD-----------------------------------------------------------IH 274 (328)
T ss_dssp CCCEEECTTCTTCCBCCTT-----------------------------------------------------------GG
T ss_pred CCCEEECCCCCchhhcchh-----------------------------------------------------------hh
Confidence 8888888888877776641 12
Q ss_pred cCCceEEEEccCCcccccCCccccCccccceEeCcccccc
Q 002238 368 TKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLS 407 (948)
Q Consensus 368 ~~~~L~~L~ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~ 407 (948)
.+++|+.|+|++|++.+.+|..|+++++|+.+++..|.+.
T Consensus 275 ~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 275 RLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp GCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred cCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 3457788888888888888999999999999999888765
No 310
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.94 E-value=5e-26 Score=248.50 Aligned_cols=247 Identities=20% Similarity=0.231 Sum_probs=171.2
Q ss_pred cEEEcccCCCCCCCCCcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEccCCCCCCC-CCCccccCCCCCCEEEccC
Q 002238 95 ERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSW-EIPQSLRNASGLQNFSANS 173 (948)
Q Consensus 95 ~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~p~~~~~l~~L~~L~l~~ 173 (948)
+.++++++.++..+..+. ++|++|+|++|+++.+++..|.++++|++|+|++|+++.. .+|..+..+++|++|++++
T Consensus 10 ~~l~c~~~~l~~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~ 87 (306)
T 2z66_A 10 TEIRCNSKGLTSVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSF 87 (306)
T ss_dssp TEEECCSSCCSSCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCS
T ss_pred CEEEcCCCCcccCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCC
Confidence 467888888877655443 5788888888888888877788888888888888887631 1144555555566666655
Q ss_pred ccccccCCCCCCCCCCCCCcEEEcccccccccCCCCcccccccceeccCCCCCCccCCCccccccCCCccEEEccCCccc
Q 002238 174 ANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFS 253 (948)
Q Consensus 174 n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~ 253 (948)
|.++. +|..+. .+++|++|+|++| +++
T Consensus 88 n~i~~-l~~~~~--~l~~L~~L~l~~n--------------------------------------------------~l~ 114 (306)
T 2z66_A 88 NGVIT-MSSNFL--GLEQLEHLDFQHS--------------------------------------------------NLK 114 (306)
T ss_dssp CSEEE-EEEEEE--TCTTCCEEECTTS--------------------------------------------------EEE
T ss_pred Ccccc-ChhhcC--CCCCCCEEECCCC--------------------------------------------------ccc
Confidence 55553 233233 4444555555554 444
Q ss_pred ccCC--CCCCCCCCcEEeccCCccccccchhhhCCCCCcEEEcccCcccc-cCCCCCCccccccccccCCCCCCCCCCCc
Q 002238 254 GPLP--DFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQG-PVPEFDRSVSLDMAKGSNNFCLPSPGACD 330 (948)
Q Consensus 254 ~~~~--~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g-~~p~~~~~~~l~~~~~~~~~~~~~~~~~~ 330 (948)
+..+ .+..+++|++|+|++|.+++..|..+..+++|++|+|++|.+++ .+|.
T Consensus 115 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~------------------------- 169 (306)
T 2z66_A 115 QMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPD------------------------- 169 (306)
T ss_dssp SSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECS-------------------------
T ss_pred ccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchh-------------------------
Confidence 4332 34555666666666666666666666666677777777776664 2332
Q ss_pred hhhhhhHHHHHhhCCcchhccccCCCCCCCCccceeecCCceEEEEccCCcccccCCccccCccccceEeCccccccccC
Q 002238 331 PRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMI 410 (948)
Q Consensus 331 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~i 410 (948)
.+..+++|+.|+|++|++++..|..|.++++|+.|+|++|++++..
T Consensus 170 ----------------------------------~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 215 (306)
T 2z66_A 170 ----------------------------------IFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLD 215 (306)
T ss_dssp ----------------------------------CCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCC
T ss_pred ----------------------------------HHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccC
Confidence 1112346677777777777777788999999999999999999887
Q ss_pred CcCCcCCCCCcEEEccCCcccCCCCC----C-CcccccccCCCCCCCCcc
Q 002238 411 PEGLSVLGALKELDVSNNQLYGKIPS----F-KSNAIVNTDGNPDIGKEK 455 (948)
Q Consensus 411 p~~l~~l~~L~~L~ls~N~l~g~ip~----~-~~~~~~~~~gnp~~~~~~ 455 (948)
+..+..+++|++|||++|++++.+|. + .....+.+++||+.|.+.
T Consensus 216 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~ 265 (306)
T 2z66_A 216 TFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 265 (306)
T ss_dssp SGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGG
T ss_pred hhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccC
Confidence 87899999999999999999998774 2 256688999999988764
No 311
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.94 E-value=1e-25 Score=260.01 Aligned_cols=248 Identities=15% Similarity=0.154 Sum_probs=178.8
Q ss_pred CcEEEcccCCCCCCCCCcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEccCCCCCCCCCCccccCCCCCCEEEccC
Q 002238 94 LERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANS 173 (948)
Q Consensus 94 L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~ 173 (948)
...++.+++.++.++..+. ++|++|+|++|.|+++++..|.++++|+.|+|++|+|+. ..|..|.++++|++|+|++
T Consensus 56 ~~~v~c~~~~l~~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~-~~~~~~~~l~~L~~L~L~~ 132 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQ-IEVGAFNGLASLNTLELFD 132 (452)
T ss_dssp SCEEECCSSCCSSCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE-ECTTTTTTCTTCCEEECCS
T ss_pred CcEEEECCCCcCccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCC-cChhhccCcccCCEEECCC
Confidence 4578888888887665554 688999999999999888888888888888888888875 3346666677777777777
Q ss_pred ccccccCCCCCCCCCCCCCcEEEcccccccccCCCCcccccccceeccCCCCCCccCCCccccccCCCccEEEccCCccc
Q 002238 174 ANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFS 253 (948)
Q Consensus 174 n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~ 253 (948)
|+|++..+..|. .+++|++|+|++|+++...+..
T Consensus 133 n~l~~~~~~~~~--~l~~L~~L~L~~N~l~~~~~~~-------------------------------------------- 166 (452)
T 3zyi_A 133 NWLTVIPSGAFE--YLSKLRELWLRNNPIESIPSYA-------------------------------------------- 166 (452)
T ss_dssp SCCSBCCTTTSS--SCTTCCEEECCSCCCCEECTTT--------------------------------------------
T ss_pred CcCCccChhhhc--ccCCCCEEECCCCCcceeCHhH--------------------------------------------
Confidence 766665555554 5666666666666665333322
Q ss_pred ccCCCCCCCCCCcEEeccCC-ccccccchhhhCCCCCcEEEcccCcccccCCCCCCccccccccccCCCCCCCCCCCchh
Q 002238 254 GPLPDFSGVKQLESLSLRDN-FFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPR 332 (948)
Q Consensus 254 ~~~~~~~~l~~L~~L~L~~N-~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 332 (948)
|.++++|+.|+|++| .+....+..|.++++|+.|+|++|++++. |.+
T Consensus 167 -----~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~~~-------------------------- 214 (452)
T 3zyi_A 167 -----FNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-PNL-------------------------- 214 (452)
T ss_dssp -----TTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-CCC--------------------------
T ss_pred -----HhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-ccc--------------------------
Confidence 334444444455442 23222223456666666666666666532 221
Q ss_pred hhhhHHHHHhhCCcchhccccCCCCCCCCccceeecCCceEEEEccCCcccccCCccccCccccceEeCccccccccCCc
Q 002238 333 LNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPE 412 (948)
Q Consensus 333 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~ 412 (948)
..+++|+.|+|++|.+++..|..|.++++|+.|+|++|++++..|.
T Consensus 215 ----------------------------------~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 260 (452)
T 3zyi_A 215 ----------------------------------TPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERN 260 (452)
T ss_dssp ----------------------------------TTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTT
T ss_pred ----------------------------------cccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHH
Confidence 1223677788888888888888999999999999999999999999
Q ss_pred CCcCCCCCcEEEccCCcccCCCCC----CCcccccccCCCCCCCCccC
Q 002238 413 GLSVLGALKELDVSNNQLYGKIPS----FKSNAIVNTDGNPDIGKEKS 456 (948)
Q Consensus 413 ~l~~l~~L~~L~ls~N~l~g~ip~----~~~~~~~~~~gnp~~~~~~~ 456 (948)
.|..+++|+.|+|++|+|++.++. +.....+.+++|||.|.+..
T Consensus 261 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~~ 308 (452)
T 3zyi_A 261 AFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDI 308 (452)
T ss_dssp TTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTTT
T ss_pred HhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCCc
Confidence 999999999999999999987664 45567889999999998764
No 312
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=3.9e-28 Score=266.35 Aligned_cols=265 Identities=21% Similarity=0.228 Sum_probs=152.7
Q ss_pred CEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEcc
Q 002238 69 RITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEID 147 (948)
Q Consensus 69 ~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 147 (948)
++...+++.+++...+...+..+++|++|+|++|+|++.+| .|.++++|++|+|++|.+++.++ |..+++|++|+|+
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 45555566666654444444556677777777777776655 56667777777777777766554 6677777777777
Q ss_pred CCCCCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccccCCCCcccccccceeccCCCCCC
Q 002238 148 NNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNA 227 (948)
Q Consensus 148 ~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~ 227 (948)
+|++++ ++ ..++|++|++++|++++..+. .+++|++|+|++|++++..+..+
T Consensus 89 ~n~l~~--l~----~~~~L~~L~l~~n~l~~~~~~-----~~~~L~~L~l~~N~l~~~~~~~~----------------- 140 (317)
T 3o53_A 89 NNYVQE--LL----VGPSIETLHAANNNISRVSCS-----RGQGKKNIYLANNKITMLRDLDE----------------- 140 (317)
T ss_dssp SSEEEE--EE----ECTTCCEEECCSSCCSEEEEC-----CCSSCEEEECCSSCCCSGGGBCT-----------------
T ss_pred CCcccc--cc----CCCCcCEEECCCCccCCcCcc-----ccCCCCEEECCCCCCCCccchhh-----------------
Confidence 776663 22 236666666666666655443 23556666666666665444333
Q ss_pred ccCCCccccccCCCccEEEccCCcccccCC-CC-CCCCCCcEEeccCCccccccchhhhCCCCCcEEEcccCcccccCCC
Q 002238 228 KLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DF-SGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPE 305 (948)
Q Consensus 228 ~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~-~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~ 305 (948)
..+++|++|+|++|.+++..+ .+ ..+++|++|+|++|.|++. |. ...+++|++|+|++|++++.++.
T Consensus 141 ---------~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l~~~ 209 (317)
T 3o53_A 141 ---------GCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPE 209 (317)
T ss_dssp ---------GGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGG
T ss_pred ---------hccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCcchhh
Confidence 245666666666666665443 23 2456666666666666533 32 22356666666666666543332
Q ss_pred CCCccccccccccCCCCCCCCCCCchhhhhhHHHHHhhCCcchhccccCCCCCCCCccceeecCCceEEEEccCCccccc
Q 002238 306 FDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGT 385 (948)
Q Consensus 306 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~g~ 385 (948)
+ ..+++|+.|+|++|+++ .
T Consensus 210 ~------------------------------------------------------------~~l~~L~~L~L~~N~l~-~ 228 (317)
T 3o53_A 210 F------------------------------------------------------------QSAAGVTWISLRNNKLV-L 228 (317)
T ss_dssp G------------------------------------------------------------GGGTTCSEEECTTSCCC-E
T ss_pred h------------------------------------------------------------cccCcccEEECcCCccc-c
Confidence 1 11235555666666665 3
Q ss_pred CCccccCccccceEeCcccccc-ccCCcCCcCCCCCcEEEcc-CCcccCCCC
Q 002238 386 ISPEFASFKSLQRLILADNNLS-GMIPEGLSVLGALKELDVS-NNQLYGKIP 435 (948)
Q Consensus 386 ip~~~~~l~~L~~L~Ls~N~l~-g~ip~~l~~l~~L~~L~ls-~N~l~g~ip 435 (948)
+|..+..+++|+.|+|++|.+. +.+|..+..+++|+.|+++ .+.++|..|
T Consensus 229 l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~ 280 (317)
T 3o53_A 229 IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNE 280 (317)
T ss_dssp ECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSS
T ss_pred hhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCch
Confidence 4555556666666666666665 5555555566666666665 334444443
No 313
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.93 E-value=4.6e-26 Score=246.01 Aligned_cols=205 Identities=23% Similarity=0.294 Sum_probs=187.7
Q ss_pred CCEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEccccc-ccCCCCccccCCCCCCEEE
Q 002238 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQ-FTSVPSDFFTGLSSLQSIE 145 (948)
Q Consensus 68 ~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~ 145 (948)
.+++.|+|++|++++..+..|.++++|++|+|++|.|++..| .|.++++|++|+|++|. ++.+++..|..+++|++|+
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 579999999999998888889999999999999999999866 79999999999999997 9999899999999999999
Q ss_pred ccCCCCCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccccCCCCcccccccceeccCCCC
Q 002238 146 IDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNG 225 (948)
Q Consensus 146 Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~ 225 (948)
|++|+++. ..|..+.++++|++|++++|++++..+..|. .+++|++|+|++|++++..+..|
T Consensus 112 l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~--~l~~L~~L~l~~n~l~~~~~~~~--------------- 173 (285)
T 1ozn_A 112 LDRCGLQE-LGPGLFRGLAALQYLYLQDNALQALPDDTFR--DLGNLTHLFLHGNRISSVPERAF--------------- 173 (285)
T ss_dssp CTTSCCCC-CCTTTTTTCTTCCEEECCSSCCCCCCTTTTT--TCTTCCEEECCSSCCCEECTTTT---------------
T ss_pred CCCCcCCE-ECHhHhhCCcCCCEEECCCCcccccCHhHhc--cCCCccEEECCCCcccccCHHHh---------------
Confidence 99999996 5578899999999999999999988888887 89999999999999996655544
Q ss_pred CCccCCCccccccCCCccEEEccCCcccccCC-CCCCCCCCcEEeccCCccccccchhhhCCCCCcEEEcccCcccc
Q 002238 226 NAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQG 301 (948)
Q Consensus 226 ~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g 301 (948)
.++++|++|+|++|++++..+ .+..+++|+.|+|++|++++..+..+..+++|+.|+|++|++..
T Consensus 174 -----------~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 239 (285)
T 1ozn_A 174 -----------RGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC 239 (285)
T ss_dssp -----------TTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred -----------cCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccC
Confidence 478999999999999999866 58889999999999999998777889999999999999999974
No 314
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.93 E-value=6.1e-28 Score=264.19 Aligned_cols=264 Identities=17% Similarity=0.203 Sum_probs=213.4
Q ss_pred CCCC-CCCCCccceEEe-CCCCEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCC-CCCC-CcC-------CCCCCc
Q 002238 50 GWSD-TDPCKWNHVVCI-EDKRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSIS-GPLP-SLN-------GLASLE 118 (948)
Q Consensus 50 ~w~~-~~~C~w~gv~c~-~~~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~-~~~p-~~~-------~l~~L~ 118 (948)
+|.. ..|+.+..+... ...+++.+++++|++ .+|..+... |+.|+|++|.++ +.+| .+. ++++|+
T Consensus 23 ~~~~~~~c~~~~~~~~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~ 98 (312)
T 1wwl_A 23 DWSSAFNCLGAADVELYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQ 98 (312)
T ss_dssp CGGGGGGSSSCSEEEEEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCC
T ss_pred chHHHhhhhccccEEEEccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCcc
Confidence 5643 345555554432 234678888999999 788877654 999999999994 4455 333 699999
Q ss_pred EEEcccccccCCCCccc--cCCCCCCEEEccCCCCCCCCCCccccCC-----CCCCEEEccCccccccCCCCCCCCCCCC
Q 002238 119 VVMLSNNQFTSVPSDFF--TGLSSLQSIEIDNNPFSSWEIPQSLRNA-----SGLQNFSANSANITGQIPSFFGPDEFPG 191 (948)
Q Consensus 119 ~L~L~~N~l~~~~~~~~--~~l~~L~~L~Ls~N~l~~~~~p~~~~~l-----~~L~~L~l~~n~l~~~~p~~~~~~~l~~ 191 (948)
+|+|++|.+++..|..+ ..+++|++|+|++|++++ +|..+..+ ++|++|+|++|++++..|..|+ .+++
T Consensus 99 ~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~--~l~~ 174 (312)
T 1wwl_A 99 ELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWAT--RDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVR--VFPA 174 (312)
T ss_dssp EEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSS--SSSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCC--CCSS
T ss_pred EEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcc--hhHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhc--cCCC
Confidence 99999999998777765 999999999999999996 48888877 9999999999999999989997 8999
Q ss_pred CcEEEcccccccccC--CCCcccccccceeccCCCCCCccCCCccccccCCCccEEEccCCcccccC--C-C-CCCCCCC
Q 002238 192 LTILHLAFNQLIGGL--PASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPL--P-D-FSGVKQL 265 (948)
Q Consensus 192 L~~L~Ls~N~l~~~~--p~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~--~-~-~~~l~~L 265 (948)
|++|+|++|++.+.+ |..+. +.++++|++|+|++|++++.. + . +.++++|
T Consensus 175 L~~L~Ls~N~l~~~~~~~~~~~------------------------~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L 230 (312)
T 1wwl_A 175 LSTLDLSDNPELGERGLISALC------------------------PLKFPTLQVLALRNAGMETPSGVCSALAAARVQL 230 (312)
T ss_dssp CCEEECCSCTTCHHHHHHHHSC------------------------TTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCC
T ss_pred CCEEECCCCCcCcchHHHHHHH------------------------hccCCCCCEEECCCCcCcchHHHHHHHHhcCCCC
Confidence 999999999987653 22221 257899999999999998522 2 2 4578999
Q ss_pred cEEeccCCccccccc-hhhhCCCCCcEEEcccCcccccCCCCCCccccccccccCCCCCCCCCCCchhhhhhHHHHHhhC
Q 002238 266 ESLSLRDNFFTGPVP-DSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMG 344 (948)
Q Consensus 266 ~~L~L~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 344 (948)
+.|+|++|++++.+| ..+..+++|+.|+|++|+++ .+|..
T Consensus 231 ~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~-------------------------------------- 271 (312)
T 1wwl_A 231 QGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKG-------------------------------------- 271 (312)
T ss_dssp SEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSS--------------------------------------
T ss_pred CEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhh--------------------------------------
Confidence 999999999998775 55667899999999999998 44530
Q ss_pred CcchhccccCCCCCCCCccceeecCCceEEEEccCCcccccCCccccCccccceEeCcccccccc
Q 002238 345 YPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGM 409 (948)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ 409 (948)
.+ ++|+.|+|++|++++. |. +..+++|++|+|++|+|++.
T Consensus 272 --------------------~~---~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~~ 311 (312)
T 1wwl_A 272 --------------------LP---AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLDS 311 (312)
T ss_dssp --------------------CC---SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTCC
T ss_pred --------------------cc---CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCCC
Confidence 00 3799999999999987 65 99999999999999999853
No 315
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.93 E-value=1.2e-26 Score=254.56 Aligned_cols=248 Identities=19% Similarity=0.188 Sum_probs=212.8
Q ss_pred CCEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCCCcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEcc
Q 002238 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEID 147 (948)
Q Consensus 68 ~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 147 (948)
.+++.|+|++|++++..|..|.++++|++|+|++|.+++.++ +..+++|++|+|++|+++++++ .++|++|+|+
T Consensus 34 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~-~~~l~~L~~L~Ls~n~l~~l~~-----~~~L~~L~l~ 107 (317)
T 3o53_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD-LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAA 107 (317)
T ss_dssp GGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE-ETTCTTCCEEECCSSEEEEEEE-----CTTCCEEECC
T ss_pred CCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh-hhhcCCCCEEECcCCccccccC-----CCCcCEEECC
Confidence 379999999999998888899999999999999999998766 9999999999999999998663 4899999999
Q ss_pred CCCCCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccccCCCCcccccccceeccCCCCCC
Q 002238 148 NNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNA 227 (948)
Q Consensus 148 ~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~ 227 (948)
+|+++. ++. ..+++|+.|++++|++++..+..+. .+++|++|+|++|++++..+..+
T Consensus 108 ~n~l~~--~~~--~~~~~L~~L~l~~N~l~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~~~~~----------------- 164 (317)
T 3o53_A 108 NNNISR--VSC--SRGQGKKNIYLANNKITMLRDLDEG--CRSRVQYLDLKLNEIDTVNFAEL----------------- 164 (317)
T ss_dssp SSCCSE--EEE--CCCSSCEEEECCSSCCCSGGGBCTG--GGSSEEEEECTTSCCCEEEGGGG-----------------
T ss_pred CCccCC--cCc--cccCCCCEEECCCCCCCCccchhhh--ccCCCCEEECCCCCCCcccHHHH-----------------
Confidence 999985 332 3478899999999999998888887 89999999999999997766654
Q ss_pred ccCCCccccccCCCccEEEccCCcccccCCCCCCCCCCcEEeccCCccccccchhhhCCCCCcEEEcccCcccccCCCCC
Q 002238 228 KLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFD 307 (948)
Q Consensus 228 ~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~ 307 (948)
+..+++|++|+|++|++++. +....+++|+.|+|++|++++ +|..+..+++|+.|+|++|++++.++.+
T Consensus 165 --------~~~l~~L~~L~L~~N~l~~~-~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~~l~~~~- 233 (317)
T 3o53_A 165 --------AASSDTLEHLNLQYNFIYDV-KGQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVLIEKAL- 233 (317)
T ss_dssp --------GGGTTTCCEEECTTSCCCEE-ECCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCEECTTC-
T ss_pred --------hhccCcCCEEECCCCcCccc-ccccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCcccchhhHh-
Confidence 23689999999999999976 444568999999999999994 5666999999999999999998643321
Q ss_pred CccccccccccCCCCCCCCCCCchhhhhhHHHHHhhCCcchhccccCCCCCCCCccceeecCCceEEEEccCCccc-ccC
Q 002238 308 RSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLT-GTI 386 (948)
Q Consensus 308 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~-g~i 386 (948)
..+++|+.|+|++|.+. +.+
T Consensus 234 -----------------------------------------------------------~~l~~L~~L~l~~N~~~~~~~ 254 (317)
T 3o53_A 234 -----------------------------------------------------------RFSQNLEHFDLRGNGFHCGTL 254 (317)
T ss_dssp -----------------------------------------------------------CCCTTCCEEECTTCCCBHHHH
T ss_pred -----------------------------------------------------------hcCCCCCEEEccCCCccCcCH
Confidence 12357899999999999 889
Q ss_pred CccccCccccceEeCcc-ccccccCCcCC
Q 002238 387 SPEFASFKSLQRLILAD-NNLSGMIPEGL 414 (948)
Q Consensus 387 p~~~~~l~~L~~L~Ls~-N~l~g~ip~~l 414 (948)
|..+..++.|+.|++++ +.++|..|...
T Consensus 255 ~~~~~~~~~L~~l~l~~~~~l~~~~~~~~ 283 (317)
T 3o53_A 255 RDFFSKNQRVQTVAKQTVKKLTGQNEEEC 283 (317)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHSSSSCCC
T ss_pred HHHHhccccceEEECCCchhccCCchhcc
Confidence 99999999999999995 56787766543
No 316
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=3.8e-26 Score=265.18 Aligned_cols=219 Identities=18% Similarity=0.214 Sum_probs=153.0
Q ss_pred CCCcEEEcccccccCCCCccccCCCCCCEEEccCCCCCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcE
Q 002238 115 ASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTI 194 (948)
Q Consensus 115 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~ 194 (948)
++|++|+|++|.+++++|..|+.+++|++|+|++|.+++ ..| +..+++|++|+|++|.|++..+ .++|++
T Consensus 34 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~--l~~l~~L~~L~Ls~N~l~~l~~-------~~~L~~ 103 (487)
T 3oja_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYE-TLD--LESLSTLRTLDLNNNYVQELLV-------GPSIET 103 (487)
T ss_dssp GGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEE-EEE--CTTCTTCCEEECCSSEEEEEEE-------CTTCCE
T ss_pred CCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCC-Ccc--cccCCCCCEEEecCCcCCCCCC-------CCCcCE
Confidence 356666666666666666666666666666666666653 222 5666666666666666664332 256777
Q ss_pred EEcccccccccCCCCcccccccceeccCCCCCCccCCCccccccCCCccEEEccCCcccccCC-CCCCCCCCcEEeccCC
Q 002238 195 LHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDN 273 (948)
Q Consensus 195 L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N 273 (948)
|+|++|++++..+. .+++|+.|+|++|.+++.+| .+.++++|+.|+|++|
T Consensus 104 L~L~~N~l~~~~~~-----------------------------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 154 (487)
T 3oja_A 104 LHAANNNISRVSCS-----------------------------RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLN 154 (487)
T ss_dssp EECCSSCCCCEEEC-----------------------------CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTS
T ss_pred EECcCCcCCCCCcc-----------------------------ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCC
Confidence 77777777654432 24567777777777777655 4667788888888888
Q ss_pred ccccccchhhh-CCCCCcEEEcccCcccccCCCCCCccccccccccCCCCCCCCCCCchhhhhhHHHHHhhCCcchhccc
Q 002238 274 FFTGPVPDSLV-KLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAEN 352 (948)
Q Consensus 274 ~l~~~~p~~l~-~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 352 (948)
.|++.+|..+. .+++|+.|+|++|.+++..+.
T Consensus 155 ~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~~----------------------------------------------- 187 (487)
T 3oja_A 155 EIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQ----------------------------------------------- 187 (487)
T ss_dssp CCCEEEGGGGGGGTTTCCEEECTTSCCCEEECC-----------------------------------------------
T ss_pred CCCCcChHHHhhhCCcccEEecCCCcccccccc-----------------------------------------------
Confidence 88877777776 688888888888888765331
Q ss_pred cCCCCCCCCccceeecCCceEEEEccCCcccccCCccccCccccceEeCccccccccCCcCCcCCCCCcEEEccCCccc-
Q 002238 353 WKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLY- 431 (948)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~ls~N~l~- 431 (948)
..+++|+.|+|++|.+++..| .|+.+++|+.|+|++|+|++ +|..+..+++|+.|++++|++.
T Consensus 188 --------------~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c 251 (487)
T 3oja_A 188 --------------VVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHC 251 (487)
T ss_dssp --------------CCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCH
T ss_pred --------------ccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcC
Confidence 013478888888888887544 48888899999999999984 7888888899999999999887
Q ss_pred CCCC
Q 002238 432 GKIP 435 (948)
Q Consensus 432 g~ip 435 (948)
+.+|
T Consensus 252 ~~~~ 255 (487)
T 3oja_A 252 GTLR 255 (487)
T ss_dssp HHHH
T ss_pred cchH
Confidence 4444
No 317
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.92 E-value=3.1e-26 Score=265.96 Aligned_cols=235 Identities=20% Similarity=0.228 Sum_probs=185.9
Q ss_pred CCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEccCCCCCCCCCCccccCCCCCCE
Q 002238 90 NLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQN 168 (948)
Q Consensus 90 ~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~ 168 (948)
.+++|++|+|++|.|++.+| .|..+++|++|+|++|.+++.++ |+.+++|++|+|++|.|++ +| ..++|+.
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~--l~----~~~~L~~ 103 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQE--LL----VGPSIET 103 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEE--EE----ECTTCCE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCC--CC----CCCCcCE
Confidence 33478888888888888776 68888888888888888888776 8888888888888888873 33 2378888
Q ss_pred EEccCccccccCCCCCCCCCCCCCcEEEcccccccccCCCCcccccccceeccCCCCCCccCCCccccccCCCccEEEcc
Q 002238 169 FSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLH 248 (948)
Q Consensus 169 L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls 248 (948)
|++++|.|++..+. .+++|+.|+|++|++++..|..+ .++++|+.|+|+
T Consensus 104 L~L~~N~l~~~~~~-----~l~~L~~L~L~~N~l~~~~~~~~--------------------------~~l~~L~~L~Ls 152 (487)
T 3oja_A 104 LHAANNNISRVSCS-----RGQGKKNIYLANNKITMLRDLDE--------------------------GCRSRVQYLDLK 152 (487)
T ss_dssp EECCSSCCCCEEEC-----CCSSCEEEECCSSCCCSGGGBCG--------------------------GGGSSEEEEECT
T ss_pred EECcCCcCCCCCcc-----ccCCCCEEECCCCCCCCCCchhh--------------------------cCCCCCCEEECC
Confidence 88888888877664 35788899999998887766654 367888899999
Q ss_pred CCcccccCC-CCC-CCCCCcEEeccCCccccccchhhhCCCCCcEEEcccCcccccCCCCCCccccccccccCCCCCCCC
Q 002238 249 SNAFSGPLP-DFS-GVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSP 326 (948)
Q Consensus 249 ~N~l~~~~~-~~~-~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~~~~ 326 (948)
+|.+++.+| .+. .+++|+.|+|++|.|++. |. +..+++|+.|+|++|++++.+|.+.
T Consensus 153 ~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~~~~~~~------------------- 211 (487)
T 3oja_A 153 LNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPEFQ------------------- 211 (487)
T ss_dssp TSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGGGG-------------------
T ss_pred CCCCCCcChHHHhhhCCcccEEecCCCccccc-cc-cccCCCCCEEECCCCCCCCCCHhHc-------------------
Confidence 998888665 454 688899999999998855 33 3468889999999998887655321
Q ss_pred CCCchhhhhhHHHHHhhCCcchhccccCCCCCCCCccceeecCCceEEEEccCCcccccCCccccCccccceEeCccccc
Q 002238 327 GACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNL 406 (948)
Q Consensus 327 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l 406 (948)
.+++|+.|+|++|.+++ +|..++.+++|+.|+|++|.+
T Consensus 212 -----------------------------------------~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l 249 (487)
T 3oja_A 212 -----------------------------------------SAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGF 249 (487)
T ss_dssp -----------------------------------------GGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCB
T ss_pred -----------------------------------------CCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCC
Confidence 23478888999998885 677888899999999999999
Q ss_pred c-ccCCcCCcCCCCCcEEEcc
Q 002238 407 S-GMIPEGLSVLGALKELDVS 426 (948)
Q Consensus 407 ~-g~ip~~l~~l~~L~~L~ls 426 (948)
. +.+|..+..++.|+.|+++
T Consensus 250 ~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 250 HCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp CHHHHHHHHTTCHHHHHHHHH
T ss_pred cCcchHHHHHhCCCCcEEecc
Confidence 8 7778888888888887776
No 318
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.92 E-value=3.7e-26 Score=267.34 Aligned_cols=187 Identities=18% Similarity=0.196 Sum_probs=147.5
Q ss_pred cccceecccCceEEEEEEEcCCcEEEEEEeecCcCChh------hHHHHHHHHHHHHhcCCCceeeEEeEEEeCCceEEE
Q 002238 596 SEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGK------GLTEFKSEIAVLTKVRHRHLVALLGHCLDGNEKLLV 669 (948)
Q Consensus 596 ~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 669 (948)
...++||+|+||.||+|... ++.+|+|+......... ..+.+.+|++++++++||||+++..++...++.++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSYL-DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEECS-SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEEC-CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 44678999999999999654 88999998755432211 235589999999999999999766667788888999
Q ss_pred EEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceec
Q 002238 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 749 (948)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~ 749 (948)
|||+++++|.+++.. +..++.|+++||+|||+ ++|+||||||+|||++. .+||+|||+++..
T Consensus 418 mE~~~ggsL~~~l~~-------------~~~i~~qi~~aL~~LH~---~gIiHrDiKp~NILl~~--~~kL~DFGla~~~ 479 (540)
T 3en9_A 418 MSYINGKLAKDVIED-------------NLDIAYKIGEIVGKLHK---NDVIHNDLTTSNFIFDK--DLYIIDFGLGKIS 479 (540)
T ss_dssp EECCCSEEHHHHSTT-------------CTHHHHHHHHHHHHHHH---TTEECTTCCTTSEEESS--SEEECCCTTCEEC
T ss_pred EECCCCCCHHHHHHH-------------HHHHHHHHHHHHHHHHH---CcCccCCCCHHHEEECC--eEEEEECccCEEC
Confidence 999999999998832 45799999999999997 89999999999999998 9999999999977
Q ss_pred CCCCCce------eeeecccccccCceeccc--CCCCchhhHHHHHHHHHHHHhCCCCCC
Q 002238 750 PEGKGSI------ETRIAGTFGYLAPEYAVT--GRVTTKVDVFSFGVILMELITGRKALD 801 (948)
Q Consensus 750 ~~~~~~~------~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~Gv~l~elltg~~p~~ 801 (948)
....... .....||+.|||||++.. ..|+.++|+|+..+-.++-+.++.+|.
T Consensus 480 ~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 480 NLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred CCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 5432211 235679999999999987 568888999999998888888777664
No 319
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.92 E-value=2e-23 Score=247.10 Aligned_cols=257 Identities=23% Similarity=0.277 Sum_probs=197.9
Q ss_pred CCCcEEEcccCCCCCCCCCcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEccCCCCCCCCCCccccCCCCCCEEEc
Q 002238 92 TKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSA 171 (948)
Q Consensus 92 ~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l 171 (948)
.+++.|++++|.|+.+++.+. ++|++|+|++|.|+.+++ .+++|++|+|++|+|+ .+|. .+++|++|+|
T Consensus 40 ~~l~~L~ls~n~L~~lp~~l~--~~L~~L~L~~N~l~~lp~----~l~~L~~L~Ls~N~l~--~lp~---~l~~L~~L~L 108 (622)
T 3g06_A 40 NGNAVLNVGESGLTTLPDCLP--AHITTLVIPDNNLTSLPA----LPPELRTLEVSGNQLT--SLPV---LPPGLLELSI 108 (622)
T ss_dssp HCCCEEECCSSCCSCCCSCCC--TTCSEEEECSCCCSCCCC----CCTTCCEEEECSCCCS--CCCC---CCTTCCEEEE
T ss_pred CCCcEEEecCCCcCccChhhC--CCCcEEEecCCCCCCCCC----cCCCCCEEEcCCCcCC--cCCC---CCCCCCEEEC
Confidence 468999999999996655565 899999999999998776 5899999999999999 5676 7899999999
Q ss_pred cCccccccCCCCCCCCCCCCCcEEEcccccccccCCCCcccccccceeccCCCCCCccCCCccccccCCCccEEEccCCc
Q 002238 172 NSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNA 251 (948)
Q Consensus 172 ~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~ 251 (948)
++|+|++.. . .+++|+.|+|++|++++ +|.. +++|++|+|++|+
T Consensus 109 s~N~l~~l~-~-----~l~~L~~L~L~~N~l~~-lp~~-----------------------------l~~L~~L~Ls~N~ 152 (622)
T 3g06_A 109 FSNPLTHLP-A-----LPSGLCKLWIFGNQLTS-LPVL-----------------------------PPGLQELSVSDNQ 152 (622)
T ss_dssp CSCCCCCCC-C-----CCTTCCEEECCSSCCSC-CCCC-----------------------------CTTCCEEECCSSC
T ss_pred cCCcCCCCC-C-----CCCCcCEEECCCCCCCc-CCCC-----------------------------CCCCCEEECcCCc
Confidence 999999643 3 36789999999999984 5543 3678888888888
Q ss_pred ccccCCCCCCCCCCcEEeccCCccccccchhhhCCCCCcEEEcccCcccccCCCCCCccccccccccCCCCCCCCCCCch
Q 002238 252 FSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDP 331 (948)
Q Consensus 252 l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~ 331 (948)
+++.+. .+.+|+.|+|++|.|+ .+| ..+++|+.|+|++|++++..+.+ .+|..+...+|.+..++.
T Consensus 153 l~~l~~---~~~~L~~L~L~~N~l~-~l~---~~~~~L~~L~Ls~N~l~~l~~~~---~~L~~L~L~~N~l~~l~~---- 218 (622)
T 3g06_A 153 LASLPA---LPSELCKLWAYNNQLT-SLP---MLPSGLQELSVSDNQLASLPTLP---SELYKLWAYNNRLTSLPA---- 218 (622)
T ss_dssp CSCCCC---CCTTCCEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSCCCCCC---TTCCEEECCSSCCSSCCC----
T ss_pred CCCcCC---ccCCCCEEECCCCCCC-CCc---ccCCCCcEEECCCCCCCCCCCcc---chhhEEECcCCcccccCC----
Confidence 876433 2467888888888887 466 45677888888888887644333 334444444444333221
Q ss_pred hhhhhHHHHHhhCCcchhccccCCCCCCCCccceeecCCceEEEEccCCcccccCCccccCccccceEeCccccccccCC
Q 002238 332 RLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIP 411 (948)
Q Consensus 332 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip 411 (948)
..++|+.|+|++|++++ +| ..+++|+.|+|++|+|+ .+|
T Consensus 219 ------------------------------------~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp 257 (622)
T 3g06_A 219 ------------------------------------LPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLP 257 (622)
T ss_dssp ------------------------------------CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCC
T ss_pred ------------------------------------CCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCC
Confidence 12479999999999997 66 55689999999999999 677
Q ss_pred cCCcCCCCCcEEEccCCcccCCCCC----CCcccccccCCCCCCCCc
Q 002238 412 EGLSVLGALKELDVSNNQLYGKIPS----FKSNAIVNTDGNPDIGKE 454 (948)
Q Consensus 412 ~~l~~l~~L~~L~ls~N~l~g~ip~----~~~~~~~~~~gnp~~~~~ 454 (948)
. .+++|+.|+|++|+|+ .+|. +.....+.+++|++.+..
T Consensus 258 ~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~ 300 (622)
T 3g06_A 258 M---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERT 300 (622)
T ss_dssp C---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHH
T ss_pred c---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcC
Confidence 6 6789999999999999 5553 445667899999987543
No 320
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.91 E-value=4.6e-24 Score=229.12 Aligned_cols=212 Identities=19% Similarity=0.243 Sum_probs=173.3
Q ss_pred CCEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEc
Q 002238 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEI 146 (948)
Q Consensus 68 ~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 146 (948)
..++.|++++|++++..+..|.++++|++|+|++|.+++..+ .|.++++|++|+|++|.++++++..|.++++|++|+|
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 358889999999887777788888999999999998888766 6888889999999999998888888888999999999
Q ss_pred cCCCCCCCCCCccccCCCCCCEEEccCcccccc-CCCCCCCCCCCCCcEEEcccccccccCCCCcccccccceeccCCCC
Q 002238 147 DNNPFSSWEIPQSLRNASGLQNFSANSANITGQ-IPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNG 225 (948)
Q Consensus 147 s~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~-~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~ 225 (948)
++|+++. ..+..+.++++|++|++++|++++. +|..+. .+++|++|+|++|++++..+..+.
T Consensus 108 ~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~-------------- 170 (276)
T 2z62_A 108 VETNLAS-LENFPIGHLKTLKELNVAHNLIQSFKLPEYFS--NLTNLEHLDLSSNKIQSIYCTDLR-------------- 170 (276)
T ss_dssp TTSCCCC-STTCCCTTCTTCCEEECCSSCCCCCCCCGGGG--GCTTCCEEECCSSCCCEECGGGGH--------------
T ss_pred CCCCccc-cCchhcccCCCCCEEECcCCccceecCchhhc--cCCCCCEEECCCCCCCcCCHHHhh--------------
Confidence 9998885 3344688888999999999988874 577776 788999999999988866555543
Q ss_pred CCccCCCccccccCCCcc-EEEccCCcccccCCCCCCCCCCcEEeccCCccccccchhhhCCCCCcEEEcccCcccccCC
Q 002238 226 NAKLGGGIDVIQNMTSLK-EIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVP 304 (948)
Q Consensus 226 ~~~~~~~~~~l~~l~~L~-~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p 304 (948)
.+.+++.|. .|++++|++++..+......+|+.|+|++|++++..+..+..+++|+.|+|++|++++..|
T Consensus 171 ---------~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 171 ---------VLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp ---------HHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred ---------hhhhccccceeeecCCCcccccCccccCCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 122333343 8999999999887776666689999999999997666778999999999999999987665
Q ss_pred C
Q 002238 305 E 305 (948)
Q Consensus 305 ~ 305 (948)
.
T Consensus 242 ~ 242 (276)
T 2z62_A 242 R 242 (276)
T ss_dssp T
T ss_pred c
Confidence 4
No 321
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.91 E-value=1.3e-23 Score=225.70 Aligned_cols=62 Identities=16% Similarity=0.164 Sum_probs=41.5
Q ss_pred EEEccCCcccccCCccccCccccceEeCccccccccCCcCCcCCCCCcEEEccCCcccCCCCC
Q 002238 374 VINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKIPS 436 (948)
Q Consensus 374 ~L~ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~ip~ 436 (948)
.|++++|.+++..+..+.. .+|+.|+|++|+|++..+..+..+++|+.|+|++|++++..|.
T Consensus 181 ~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 242 (276)
T 2z62_A 181 SLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 242 (276)
T ss_dssp EEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTT
T ss_pred eeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCc
Confidence 4555555555444433333 3678888888888766556677888888888888888877664
No 322
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.90 E-value=1.2e-23 Score=225.17 Aligned_cols=227 Identities=19% Similarity=0.208 Sum_probs=130.1
Q ss_pred CCcEEEcccCCCCCCCCCcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEccCCCCCCCCCCccccCCCCCCEEEcc
Q 002238 93 KLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSAN 172 (948)
Q Consensus 93 ~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~ 172 (948)
++..+++..+.+.... .+..+++|+.|++++|.++.+. .+..+++|++|+|++|++++ + ..+..+++|++|+++
T Consensus 20 ~l~~l~l~~~~~~~~~-~~~~l~~L~~L~l~~~~i~~~~--~l~~l~~L~~L~l~~n~l~~--~-~~l~~l~~L~~L~L~ 93 (272)
T 3rfs_A 20 ETIKANLKKKSVTDAV-TQNELNSIDQIIANNSDIKSVQ--GIQYLPNVRYLALGGNKLHD--I-SALKELTNLTYLILT 93 (272)
T ss_dssp HHHHHHHTCSCTTSEE-CHHHHTTCCEEECTTSCCCCCT--TGGGCTTCCEEECTTSCCCC--C-GGGTTCTTCCEEECT
T ss_pred HHHHHHhcCccccccc-ccccccceeeeeeCCCCccccc--ccccCCCCcEEECCCCCCCC--c-hhhcCCCCCCEEECC
Confidence 3444444454444322 2344555555566555555433 25555666666666665553 2 255556666666666
Q ss_pred CccccccCCCCCCCCCCCCCcEEEcccccccccCCCCcccccccceeccCCCCCCccCCCccccccCCCccEEEccCCcc
Q 002238 173 SANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAF 252 (948)
Q Consensus 173 ~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l 252 (948)
+|.+++..+..|. .+++|++|+|++|++++..+..| .++++|++|+|++|++
T Consensus 94 ~n~l~~~~~~~~~--~l~~L~~L~L~~n~l~~~~~~~~--------------------------~~l~~L~~L~L~~n~l 145 (272)
T 3rfs_A 94 GNQLQSLPNGVFD--KLTNLKELVLVENQLQSLPDGVF--------------------------DKLTNLTYLNLAHNQL 145 (272)
T ss_dssp TSCCCCCCTTTTT--TCTTCCEEECTTSCCCCCCTTTT--------------------------TTCTTCCEEECCSSCC
T ss_pred CCccCccChhHhc--CCcCCCEEECCCCcCCccCHHHh--------------------------ccCCCCCEEECCCCcc
Confidence 6666655555554 56666666666666654444332 2456666666666666
Q ss_pred cccCCC-CCCCCCCcEEeccCCccccccchhhhCCCCCcEEEcccCcccccCCCCCCccccccccccCCCCCCCCCCCch
Q 002238 253 SGPLPD-FSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDP 331 (948)
Q Consensus 253 ~~~~~~-~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~ 331 (948)
++.++. +..+++|+.|+|++|++++..+..+..+++|+.|+|++|++++.+|..
T Consensus 146 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~------------------------- 200 (272)
T 3rfs_A 146 QSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGV------------------------- 200 (272)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTT-------------------------
T ss_pred CccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHH-------------------------
Confidence 655443 455666666666666666555555566666666666666666544421
Q ss_pred hhhhhHHHHHhhCCcchhccccCCCCCCCCccceeecCCceEEEEccCCcccccCCccccCccccceEeCccccccccCC
Q 002238 332 RLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIP 411 (948)
Q Consensus 332 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip 411 (948)
+..+++|+.|+|++|.+.+. ++.|+.|+++.|+++|.+|
T Consensus 201 ----------------------------------~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip 239 (272)
T 3rfs_A 201 ----------------------------------FDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVR 239 (272)
T ss_dssp ----------------------------------TTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBB
T ss_pred ----------------------------------HhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCccc
Confidence 11223566666666665533 4467778888888888888
Q ss_pred cCCcCCCC
Q 002238 412 EGLSVLGA 419 (948)
Q Consensus 412 ~~l~~l~~ 419 (948)
..++.+..
T Consensus 240 ~~~~~~~~ 247 (272)
T 3rfs_A 240 NSAGSVAP 247 (272)
T ss_dssp CTTSCBCG
T ss_pred CcccccCC
Confidence 87776654
No 323
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.90 E-value=1e-26 Score=269.58 Aligned_cols=326 Identities=19% Similarity=0.187 Sum_probs=180.6
Q ss_pred CEEEEEeCCCCCcC----CCCccccCCCCCcEEEcccCCCCCCCC-Cc-CCCC----CCcEEEcccccccC----CCCcc
Q 002238 69 RITRIQIGHQNLQG----TLPSNLQNLTKLERLELQWNSISGPLP-SL-NGLA----SLEVVMLSNNQFTS----VPSDF 134 (948)
Q Consensus 69 ~v~~l~l~~~~l~~----~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~-~~l~----~L~~L~L~~N~l~~----~~~~~ 134 (948)
+++.|+|++|+++. .++..+..+++|++|+|++|.++...+ .+ ..++ +|++|+|++|.++. .++..
T Consensus 29 ~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~ 108 (461)
T 1z7x_W 29 QCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSST 108 (461)
T ss_dssp TCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHH
T ss_pred CccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHH
Confidence 56666777766653 344556666777777777776654222 11 2233 57777777777663 34556
Q ss_pred ccCCCCCCEEEccCCCCCCCCCCcccc-----CCCCCCEEEccCccccccC----CCCCCCCCCCCCcEEEccccccccc
Q 002238 135 FTGLSSLQSIEIDNNPFSSWEIPQSLR-----NASGLQNFSANSANITGQI----PSFFGPDEFPGLTILHLAFNQLIGG 205 (948)
Q Consensus 135 ~~~l~~L~~L~Ls~N~l~~~~~p~~~~-----~l~~L~~L~l~~n~l~~~~----p~~~~~~~l~~L~~L~Ls~N~l~~~ 205 (948)
|..+++|++|+|++|+++. ..+..+. ..++|++|++++|++++.. +..+. .+++|++|+|++|++...
T Consensus 109 l~~~~~L~~L~Ls~n~i~~-~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~--~~~~L~~L~L~~n~i~~~ 185 (461)
T 1z7x_W 109 LRTLPTLQELHLSDNLLGD-AGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLR--AKPDFKELTVSNNDINEA 185 (461)
T ss_dssp TTSCTTCCEEECCSSBCHH-HHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHH--HCTTCCEEECCSSBCHHH
T ss_pred HccCCceeEEECCCCcCch-HHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHh--hCCCCCEEECcCCCcchH
Confidence 6677777777777776653 2122221 2446777777777766533 33333 456777777777776644
Q ss_pred CCCCccc------ccccceeccCCCCCCccCC----CccccccCCCccEEEccCCcccccC-----CC-CCCCCCCcEEe
Q 002238 206 LPASFSG------SQIQSLWVNGQNGNAKLGG----GIDVIQNMTSLKEIWLHSNAFSGPL-----PD-FSGVKQLESLS 269 (948)
Q Consensus 206 ~p~~~~~------~~l~~l~~~~~~~~~~~~~----~~~~l~~l~~L~~L~Ls~N~l~~~~-----~~-~~~l~~L~~L~ 269 (948)
.+..+.. .+++.|++.++. .... .+..+..+++|++|+|++|.+++.. +. +..+++|+.|+
T Consensus 186 ~~~~l~~~l~~~~~~L~~L~L~~n~---l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~ 262 (461)
T 1z7x_W 186 GVRVLCQGLKDSPCQLEALKLESCG---VTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLW 262 (461)
T ss_dssp HHHHHHHHHHHSCCCCCEEECTTSC---CBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEE
T ss_pred HHHHHHHHHhcCCCCceEEEccCCC---CcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEE
Confidence 3333321 245555554432 2221 2345556677777777777766521 22 22466777777
Q ss_pred ccCCccccc----cchhhhCCCCCcEEEcccCcccccCCC-CC-----CccccccccccCCCCCCCCCCCchhhhhhHHH
Q 002238 270 LRDNFFTGP----VPDSLVKLESLKIVNMTNNLLQGPVPE-FD-----RSVSLDMAKGSNNFCLPSPGACDPRLNALLSV 339 (948)
Q Consensus 270 L~~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~g~~p~-~~-----~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 339 (948)
|++|.++.. ++..+.++++|++|+|++|.+++..+. +. ...+|..++..+|...... . ..
T Consensus 263 L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~------~---~~- 332 (461)
T 1z7x_W 263 IWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAAC------C---SH- 332 (461)
T ss_dssp CTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGG------H---HH-
T ss_pred CcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHH------H---HH-
Confidence 777777743 566666677777777777776542211 00 0123333333333211100 0 00
Q ss_pred HHhhCCcchhccccCCCCCCCCccceeecCCceEEEEccCCcccccCCccccC-----ccccceEeCccccccc----cC
Q 002238 340 VKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFAS-----FKSLQRLILADNNLSG----MI 410 (948)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~g~ip~~~~~-----l~~L~~L~Ls~N~l~g----~i 410 (948)
+...+..+++|+.|+|++|.+.+..+..+.. .++|++|+|++|++++ .+
T Consensus 333 ----------------------l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l 390 (461)
T 1z7x_W 333 ----------------------FSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSL 390 (461)
T ss_dssp ----------------------HHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHH
T ss_pred ----------------------HHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHH
Confidence 0011223456677777777766655554443 4567777777777765 56
Q ss_pred CcCCcCCCCCcEEEccCCcccC
Q 002238 411 PEGLSVLGALKELDVSNNQLYG 432 (948)
Q Consensus 411 p~~l~~l~~L~~L~ls~N~l~g 432 (948)
|..+..+++|++|||++|++++
T Consensus 391 ~~~l~~~~~L~~L~l~~N~i~~ 412 (461)
T 1z7x_W 391 AATLLANHSLRELDLSNNCLGD 412 (461)
T ss_dssp HHHHHHCCCCCEEECCSSSCCH
T ss_pred HHHHHhCCCccEEECCCCCCCH
Confidence 6666667777777777777654
No 324
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.90 E-value=9e-24 Score=226.13 Aligned_cols=221 Identities=21% Similarity=0.223 Sum_probs=161.3
Q ss_pred CCcEEEcccccccCCCCccccCCCCCCEEEccCCCCCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEE
Q 002238 116 SLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTIL 195 (948)
Q Consensus 116 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L 195 (948)
++..+++.++.+..... +..+++|+.|++++|.++. + ..+..+++|++|++++|++++. ..+. .+++|++|
T Consensus 20 ~l~~l~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~--~-~~l~~l~~L~~L~l~~n~l~~~--~~l~--~l~~L~~L 90 (272)
T 3rfs_A 20 ETIKANLKKKSVTDAVT--QNELNSIDQIIANNSDIKS--V-QGIQYLPNVRYLALGGNKLHDI--SALK--ELTNLTYL 90 (272)
T ss_dssp HHHHHHHTCSCTTSEEC--HHHHTTCCEEECTTSCCCC--C-TTGGGCTTCCEEECTTSCCCCC--GGGT--TCTTCCEE
T ss_pred HHHHHHhcCcccccccc--cccccceeeeeeCCCCccc--c-cccccCCCCcEEECCCCCCCCc--hhhc--CCCCCCEE
Confidence 44455666666665532 5677888888888888773 2 3577788888888888888763 2454 77888888
Q ss_pred EcccccccccCCCCcccccccceeccCCCCCCccCCCccccccCCCccEEEccCCcccccCCC-CCCCCCCcEEeccCCc
Q 002238 196 HLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPD-FSGVKQLESLSLRDNF 274 (948)
Q Consensus 196 ~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~L~~N~ 274 (948)
+|++|++++..+..| .++++|++|+|++|++++.++. +.++++|++|+|++|+
T Consensus 91 ~L~~n~l~~~~~~~~--------------------------~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 144 (272)
T 3rfs_A 91 ILTGNQLQSLPNGVF--------------------------DKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQ 144 (272)
T ss_dssp ECTTSCCCCCCTTTT--------------------------TTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred ECCCCccCccChhHh--------------------------cCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCc
Confidence 888888876555443 3678888888888888876664 6778888888888888
Q ss_pred cccccchhhhCCCCCcEEEcccCcccccCCCCCCccccccccccCCCCCCCCCCCchhhhhhHHHHHhhCCcchhccccC
Q 002238 275 FTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWK 354 (948)
Q Consensus 275 l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 354 (948)
+++..+..+..+++|+.|+|++|++++.++..
T Consensus 145 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~------------------------------------------------ 176 (272)
T 3rfs_A 145 LQSLPKGVFDKLTNLTELDLSYNQLQSLPEGV------------------------------------------------ 176 (272)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT------------------------------------------------
T ss_pred cCccCHHHhccCccCCEEECCCCCcCccCHHH------------------------------------------------
Confidence 88666666778888888888888887655431
Q ss_pred CCCCCCCccceeecCCceEEEEccCCcccccCCccccCccccceEeCccccccccCCcCCcCCCCCcEEEccCCcccCCC
Q 002238 355 GNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGKI 434 (948)
Q Consensus 355 ~~~~~~~~~~~~~~~~~L~~L~ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~i 434 (948)
+..+++|+.|+|++|++++..|..|+++++|+.|+|++|.+.+..| +|+.|+++.|.++|.+
T Consensus 177 -----------~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~-------~l~~l~~~~n~~~g~i 238 (272)
T 3rfs_A 177 -----------FDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP-------GIRYLSEWINKHSGVV 238 (272)
T ss_dssp -----------TTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT-------TTHHHHHHHHHTGGGB
T ss_pred -----------hcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc-------HHHHHHHHHHhCCCcc
Confidence 1123467888888888888777778888888888888888775543 6788888888888888
Q ss_pred CCC
Q 002238 435 PSF 437 (948)
Q Consensus 435 p~~ 437 (948)
|..
T Consensus 239 p~~ 241 (272)
T 3rfs_A 239 RNS 241 (272)
T ss_dssp BCT
T ss_pred cCc
Confidence 764
No 325
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.89 E-value=5e-27 Score=272.26 Aligned_cols=350 Identities=15% Similarity=0.126 Sum_probs=228.0
Q ss_pred CCEEEEEeCCCCCcCCCCcc-ccCCCCCcEEEcccCCCCCC----CC-CcCCCCCCcEEEcccccccCCCCcc-ccCCC-
Q 002238 68 KRITRIQIGHQNLQGTLPSN-LQNLTKLERLELQWNSISGP----LP-SLNGLASLEVVMLSNNQFTSVPSDF-FTGLS- 139 (948)
Q Consensus 68 ~~v~~l~l~~~~l~~~~p~~-l~~l~~L~~L~L~~N~l~~~----~p-~~~~l~~L~~L~L~~N~l~~~~~~~-~~~l~- 139 (948)
.+++.|+|++++++...... +..+++|++|+|++|.++.. ++ .+..+++|++|+|++|.++...+.. +..++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 36899999999988544333 77889999999999999853 23 5778899999999999998754433 34455
Q ss_pred ---CCCEEEccCCCCCCC---CCCccccCCCCCCEEEccCccccccCCCCCC---CCCCCCCcEEEcccccccccCCCCc
Q 002238 140 ---SLQSIEIDNNPFSSW---EIPQSLRNASGLQNFSANSANITGQIPSFFG---PDEFPGLTILHLAFNQLIGGLPASF 210 (948)
Q Consensus 140 ---~L~~L~Ls~N~l~~~---~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~---~~~l~~L~~L~Ls~N~l~~~~p~~~ 210 (948)
+|++|+|++|+++.. .++..+..+++|++|++++|.+++..+..+. ....++|++|+|++|++++.....+
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 799999999999841 3578899999999999999999865444332 0135689999999999986543222
Q ss_pred ----cc-ccccceeccCCCCCCccCCCccccc-----cCCCccEEEccCCccccc----CC-CCCCCCCCcEEeccCCcc
Q 002238 211 ----SG-SQIQSLWVNGQNGNAKLGGGIDVIQ-----NMTSLKEIWLHSNAFSGP----LP-DFSGVKQLESLSLRDNFF 275 (948)
Q Consensus 211 ----~~-~~l~~l~~~~~~~~~~~~~~~~~l~-----~l~~L~~L~Ls~N~l~~~----~~-~~~~l~~L~~L~L~~N~l 275 (948)
.. .+++.|++.++ ......+..+. ..++|++|+|++|.+++. ++ .+..+++|+.|+|++|.+
T Consensus 163 ~~~l~~~~~L~~L~L~~n---~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l 239 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNN---DINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKL 239 (461)
T ss_dssp HHHHHHCTTCCEEECCSS---BCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBC
T ss_pred HHHHhhCCCCCEEECcCC---CcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcC
Confidence 21 34555555433 22222222222 245677777777776652 12 344566777777777776
Q ss_pred cccc-----chhhhCCCCCcEEEcccCccccc----CCC-CCCccccccccccCCCCCCCCCCCchhhhhhHHHHHhhCC
Q 002238 276 TGPV-----PDSLVKLESLKIVNMTNNLLQGP----VPE-FDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGY 345 (948)
Q Consensus 276 ~~~~-----p~~l~~l~~L~~L~Ls~N~l~g~----~p~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 345 (948)
++.. +..+..+++|+.|+|++|.+++. ++. +..+.+|..++..+|..... ....+...
T Consensus 240 ~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~---------~~~~l~~~--- 307 (461)
T 1z7x_W 240 GDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDE---------GARLLCET--- 307 (461)
T ss_dssp HHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHH---------HHHHHHHH---
T ss_pred ChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchH---------HHHHHHHH---
Confidence 6432 22222466777777777776652 222 33344444444444421100 00000000
Q ss_pred cchhccccCCCCCCCCccceeecCCceEEEEccCCccccc----CCccccCccccceEeCccccccccCCcCCcC-----
Q 002238 346 PQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGT----ISPEFASFKSLQRLILADNNLSGMIPEGLSV----- 416 (948)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~g~----ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~----- 416 (948)
.....++|+.|+|++|.+++. ++..+..+++|++|+|++|++++..+..+..
T Consensus 308 -------------------l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~ 368 (461)
T 1z7x_W 308 -------------------LLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQP 368 (461)
T ss_dssp -------------------HTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTST
T ss_pred -------------------hccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCC
Confidence 001124788999999998875 5677777889999999999888665555543
Q ss_pred CCCCcEEEccCCcccC----CCCC----CCcccccccCCCCCC
Q 002238 417 LGALKELDVSNNQLYG----KIPS----FKSNAIVNTDGNPDI 451 (948)
Q Consensus 417 l~~L~~L~ls~N~l~g----~ip~----~~~~~~~~~~gnp~~ 451 (948)
.++|++|+|++|++++ .+|. ......+.+++|+..
T Consensus 369 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~ 411 (461)
T 1z7x_W 369 GSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLG 411 (461)
T ss_dssp TCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCC
T ss_pred CCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCC
Confidence 6789999999998885 4442 455667788888643
No 326
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.89 E-value=1.5e-22 Score=218.44 Aligned_cols=201 Identities=18% Similarity=0.215 Sum_probs=174.8
Q ss_pred EeCCCCEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEcccccccCCCCccccCCCCCC
Q 002238 64 CIEDKRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQ 142 (948)
Q Consensus 64 c~~~~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 142 (948)
|..-.+++++++++++++ .+|..+. ++|+.|+|++|.|++..+ .|.++++|++|+|++|.|+++++. +.+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCC
Confidence 445567899999999998 6776665 689999999999998776 689999999999999999987764 7899999
Q ss_pred EEEccCCCCCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccccCCCCcccccccceeccC
Q 002238 143 SIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNG 222 (948)
Q Consensus 143 ~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~ 222 (948)
+|+|++|+++ .+|..+..+++|++|+|++|+|++..+..|. .+++|++|+|++|++++..+..|
T Consensus 81 ~L~Ls~N~l~--~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~------------ 144 (290)
T 1p9a_G 81 TLDLSHNQLQ--SLPLLGQTLPALTVLDVSFNRLTSLPLGALR--GLGELQELYLKGNELKTLPPGLL------------ 144 (290)
T ss_dssp EEECCSSCCS--SCCCCTTTCTTCCEEECCSSCCCCCCSSTTT--TCTTCCEEECTTSCCCCCCTTTT------------
T ss_pred EEECCCCcCC--cCchhhccCCCCCEEECCCCcCcccCHHHHc--CCCCCCEEECCCCCCCccChhhc------------
Confidence 9999999998 6888899999999999999999988888887 89999999999999986555443
Q ss_pred CCCCCccCCCccccccCCCccEEEccCCcccccCCC-CCCCCCCcEEeccCCccccccchhhhCCCCCcEEEcccCccc
Q 002238 223 QNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPD-FSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQ 300 (948)
Q Consensus 223 ~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 300 (948)
..+++|+.|+|++|+++..++. |.++++|+.|+|++|+|+ .+|..+..+++|+.|+|++|++.
T Consensus 145 --------------~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 145 --------------TPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp --------------TTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred --------------ccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 4789999999999999977664 677999999999999999 78888889999999999999885
No 327
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.89 E-value=1.3e-22 Score=218.84 Aligned_cols=203 Identities=17% Similarity=0.146 Sum_probs=109.2
Q ss_pred ccCCCCCCEEEccCCCCCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccccCCCCccccc
Q 002238 135 FTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQ 214 (948)
Q Consensus 135 ~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~ 214 (948)
++++++|+++++++|+++ .+|..+. ++|+.|+|++|++++..+..|. .+++|++|+|++|++++..+.
T Consensus 6 ~~~l~~l~~l~~~~~~l~--~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~--~l~~L~~L~L~~n~l~~~~~~------ 73 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT--ALPPDLP--KDTTILHLSENLLYTFSLATLM--PYTRLTQLNLDRAELTKLQVD------ 73 (290)
T ss_dssp EECSTTCCEEECTTSCCS--SCCSCCC--TTCCEEECTTSCCSEEEGGGGT--TCTTCCEEECTTSCCCEEECC------
T ss_pred ccccCCccEEECCCCCCC--cCCCCCC--CCCCEEEcCCCcCCccCHHHhh--cCCCCCEEECCCCccCcccCC------
Confidence 334444444444444444 2333332 3444444444444444444444 455555555555555432221
Q ss_pred ccceeccCCCCCCccCCCccccccCCCccEEEccCCcccccCCCCCCCCCCcEEeccCCccccccchhhhCCCCCcEEEc
Q 002238 215 IQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNM 294 (948)
Q Consensus 215 l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 294 (948)
..+++|++|+|++|+++..+..+.++++|+.|+|++|+|++..|..|.++++|++|+|
T Consensus 74 ----------------------~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L 131 (290)
T 1p9a_G 74 ----------------------GTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYL 131 (290)
T ss_dssp ----------------------SCCTTCCEEECCSSCCSSCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEEC
T ss_pred ----------------------CCCCcCCEEECCCCcCCcCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEEC
Confidence 1345555555555555543334555566666666666666544555666666666666
Q ss_pred ccCcccccCCCCCCccccccccccCCCCCCCCCCCchhhhhhHHHHHhhCCcchhccccCCCCCCCCccceeecCCceEE
Q 002238 295 TNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITV 374 (948)
Q Consensus 295 s~N~l~g~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 374 (948)
++|++++.++. .+..+++|+.
T Consensus 132 ~~N~l~~~~~~-----------------------------------------------------------~~~~l~~L~~ 152 (290)
T 1p9a_G 132 KGNELKTLPPG-----------------------------------------------------------LLTPTPKLEK 152 (290)
T ss_dssp TTSCCCCCCTT-----------------------------------------------------------TTTTCTTCCE
T ss_pred CCCCCCccChh-----------------------------------------------------------hcccccCCCE
Confidence 66666543332 0112234555
Q ss_pred EEccCCcccccCCccccCccccceEeCccccccccCCcCCcCCCCCcEEEccCCccc
Q 002238 375 INFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLY 431 (948)
Q Consensus 375 L~ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~ls~N~l~ 431 (948)
|+|++|++++..+..|..+++|+.|+|++|+|+ .+|..+..+.+|+.|+|++|++.
T Consensus 153 L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 153 LSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp EECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred EECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 555555555444445667777888888888777 67777777777777777666553
No 328
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=1.1e-23 Score=230.21 Aligned_cols=201 Identities=15% Similarity=0.168 Sum_probs=120.3
Q ss_pred CCCEEEccCCCCCCCCCCccc--cCCCCCCEEEccCccccccCC----CCCCCCCCCCCcEEEcccccccccCCCCcccc
Q 002238 140 SLQSIEIDNNPFSSWEIPQSL--RNASGLQNFSANSANITGQIP----SFFGPDEFPGLTILHLAFNQLIGGLPASFSGS 213 (948)
Q Consensus 140 ~L~~L~Ls~N~l~~~~~p~~~--~~l~~L~~L~l~~n~l~~~~p----~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 213 (948)
+|++|+|++|++++ .+|..+ ..+++|++|+|++|.+++..+ ..+. .+++|++|+|++|++.+..|..|
T Consensus 92 ~L~~L~l~~n~l~~-~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~--~~~~L~~L~Ls~n~l~~~~~~~~--- 165 (310)
T 4glp_A 92 RLKELTLEDLKITG-TMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQW--LKPGLKVLSIAQAHSPAFSCEQV--- 165 (310)
T ss_dssp CCCEEEEESCCCBS-CCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTT--BCSCCCEEEEECCSSCCCCTTSC---
T ss_pred ceeEEEeeCCEecc-chhhhhhhccCCCCCEEEeecccccchhhhhHHHHhh--hccCCCEEEeeCCCcchhhHHHh---
Confidence 34444444444443 333333 444444444444444444332 1111 35556666666666554444443
Q ss_pred cccceeccCCCCCCccCCCccccccCCCccEEEccCCcccc---cCCC--CCCCCCCcEEeccCCccccccch----hhh
Q 002238 214 QIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSG---PLPD--FSGVKQLESLSLRDNFFTGPVPD----SLV 284 (948)
Q Consensus 214 ~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~---~~~~--~~~l~~L~~L~L~~N~l~~~~p~----~l~ 284 (948)
.++++|++|+|++|++.+ ..+. +..+++|++|+|++|+++ .+|. .+.
T Consensus 166 -----------------------~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~ 221 (310)
T 4glp_A 166 -----------------------RAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAA 221 (310)
T ss_dssp -----------------------CCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHH
T ss_pred -----------------------ccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHh
Confidence 245666666666666544 1111 245677777777777776 3333 246
Q ss_pred CCCCCcEEEcccCcccccCCC-CCCccccccccccCCCCCCCCCCCchhhhhhHHHHHhhCCcchhccccCCCCCCCCcc
Q 002238 285 KLESLKIVNMTNNLLQGPVPE-FDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWI 363 (948)
Q Consensus 285 ~l~~L~~L~Ls~N~l~g~~p~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (948)
.+++|++|+|++|++++..|. +..+
T Consensus 222 ~l~~L~~L~Ls~N~l~~~~p~~~~~~------------------------------------------------------ 247 (310)
T 4glp_A 222 AGVQPHSLDLSHNSLRATVNPSAPRC------------------------------------------------------ 247 (310)
T ss_dssp HTCCCSSEECTTSCCCCCCCSCCSSC------------------------------------------------------
T ss_pred cCCCCCEEECCCCCCCccchhhHHhc------------------------------------------------------
Confidence 778888888888888776553 1111
Q ss_pred ceeecCCceEEEEccCCcccccCCccccCccccceEeCccccccccCCcCCcCCCCCcEEEccCCcccC
Q 002238 364 GVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYG 432 (948)
Q Consensus 364 ~~~~~~~~L~~L~ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g 432 (948)
..+++|+.|+|++|+++ .+|..+. ++|+.|+|++|+|++. |. +..+++|+.|+|++|+|+.
T Consensus 248 ---~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 248 ---MWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp ---CCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred ---cCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 01246778888888888 6677664 7899999999999853 43 6788899999999998864
No 329
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=2.5e-22 Score=212.21 Aligned_cols=190 Identities=20% Similarity=0.301 Sum_probs=124.7
Q ss_pred CCCCccceEEeCCCCEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEcccccccCCCCc
Q 002238 55 DPCKWNHVVCIEDKRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSD 133 (948)
Q Consensus 55 ~~C~w~gv~c~~~~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~ 133 (948)
+||.|.|+.|.. ..+.+++++++++ .+|..+. ++|+.|+|++|+|++..+ .|.++++|++|+|++|.|+++++.
T Consensus 3 ~Cp~~~gC~C~~--~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 77 (251)
T 3m19_A 3 TCETVTGCTCNE--GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAG 77 (251)
T ss_dssp -CHHHHSSEEEG--GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTT
T ss_pred cCCCCCceEcCC--CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHh
Confidence 578999999964 3446888888888 6776665 578888888888888776 577888888888888888888887
Q ss_pred cccCCCCCCEEEccCCCCCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccccCCCCcccc
Q 002238 134 FFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGS 213 (948)
Q Consensus 134 ~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 213 (948)
.|..+++|++|+|++|+++. ..+..+..+++|++|+|++|+|++..+..|. .+++|++|+|++|++
T Consensus 78 ~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~Ls~N~l----------- 143 (251)
T 3m19_A 78 VFDDLTELGTLGLANNQLAS-LPLGVFDHLTQLDKLYLGGNQLKSLPSGVFD--RLTKLKELRLNTNQL----------- 143 (251)
T ss_dssp TTTTCTTCCEEECTTSCCCC-CCTTTTTTCTTCCEEECCSSCCCCCCTTTTT--TCTTCCEEECCSSCC-----------
T ss_pred HhccCCcCCEEECCCCcccc-cChhHhcccCCCCEEEcCCCcCCCcChhHhc--cCCcccEEECcCCcC-----------
Confidence 78888888888888887774 2234455555555555555555544444443 445555555555554
Q ss_pred cccceeccCCCCCCccCCCccccccCCCccEEEccCCcccccCC-CCCCCCCCcEEeccCCccccccchhhhCCCCCcEE
Q 002238 214 QIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIV 292 (948)
Q Consensus 214 ~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 292 (948)
++.++ .+..+++|+.|+|++|+|++..+..+..+++|+.|
T Consensus 144 ---------------------------------------~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 184 (251)
T 3m19_A 144 ---------------------------------------QSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTI 184 (251)
T ss_dssp ---------------------------------------CCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEE
T ss_pred ---------------------------------------CccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEE
Confidence 44433 24445555555555555554445555556666666
Q ss_pred EcccCccccc
Q 002238 293 NMTNNLLQGP 302 (948)
Q Consensus 293 ~Ls~N~l~g~ 302 (948)
+|++|++++.
T Consensus 185 ~l~~N~~~c~ 194 (251)
T 3m19_A 185 TLFGNQFDCS 194 (251)
T ss_dssp ECCSCCBCTT
T ss_pred EeeCCceeCC
Confidence 6666666544
No 330
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.89 E-value=4.6e-22 Score=212.61 Aligned_cols=137 Identities=20% Similarity=0.261 Sum_probs=87.3
Q ss_pred cCCCccEEEccCCcccccCCC-CCCCCCCcEEeccCCccccccchhhhCCCCCcEEEcccCcccccCCCCCCcccccccc
Q 002238 238 NMTSLKEIWLHSNAFSGPLPD-FSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAK 316 (948)
Q Consensus 238 ~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~ 316 (948)
++++|++|+|++|++++.++. +.++++|+.|+|++|++++..|..|..+++|++|+|++|++++..+.
T Consensus 83 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~----------- 151 (270)
T 2o6q_A 83 ELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKG----------- 151 (270)
T ss_dssp SCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT-----------
T ss_pred CCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHh-----------
Confidence 455555555555555554442 45556666666666666655555566666666666666666543332
Q ss_pred ccCCCCCCCCCCCchhhhhhHHHHHhhCCcchhccccCCCCCCCCccceeecCCceEEEEccCCcccccCCccccCcccc
Q 002238 317 GSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSL 396 (948)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~g~ip~~~~~l~~L 396 (948)
.+..+++|+.|+|++|.+++..+..|.++++|
T Consensus 152 ------------------------------------------------~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 183 (270)
T 2o6q_A 152 ------------------------------------------------VFDKLTSLKELRLYNNQLKRVPEGAFDKLTEL 183 (270)
T ss_dssp ------------------------------------------------TTTTCTTCCEEECCSSCCSCCCTTTTTTCTTC
T ss_pred ------------------------------------------------HccCCcccceeEecCCcCcEeChhHhccCCCc
Confidence 01122356666666666666555667788888
Q ss_pred ceEeCccccccccCCcCCcCCCCCcEEEccCCcccCC
Q 002238 397 QRLILADNNLSGMIPEGLSVLGALKELDVSNNQLYGK 433 (948)
Q Consensus 397 ~~L~Ls~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~ 433 (948)
++|+|++|+|++..+..+..+++|+.|+|++|++...
T Consensus 184 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 184 KTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp CEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCS
T ss_pred CEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCC
Confidence 8888888888866666788888888888888877543
No 331
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.88 E-value=2.9e-24 Score=240.15 Aligned_cols=63 Identities=16% Similarity=0.170 Sum_probs=37.5
Q ss_pred ceEEEEccCCcccccCC----ccccCccccceEeCcccccccc-------CCcCCcCCCCCcEEEccCCcccCC
Q 002238 371 NITVINFQKMNLTGTIS----PEFASFKSLQRLILADNNLSGM-------IPEGLSVLGALKELDVSNNQLYGK 433 (948)
Q Consensus 371 ~L~~L~ls~n~l~g~ip----~~~~~l~~L~~L~Ls~N~l~g~-------ip~~l~~l~~L~~L~ls~N~l~g~ 433 (948)
+|+.|+|++|.+.+..+ ..+..++.|+.|+|++|++.+. ++..+..+++|++||+++|++...
T Consensus 226 ~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 226 HVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp TCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred CceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 56666666666655433 2344556677777777764322 334566666777777777776654
No 332
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.88 E-value=4.7e-22 Score=208.50 Aligned_cols=189 Identities=17% Similarity=0.207 Sum_probs=134.2
Q ss_pred CCCccccCCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEccccc-ccCCCCccccCCCCCCEEEccC-CCCCCCCCCcc
Q 002238 83 TLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQ-FTSVPSDFFTGLSSLQSIEIDN-NPFSSWEIPQS 159 (948)
Q Consensus 83 ~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~~p~~ 159 (948)
.+|. +. .+|++|+|++|+|+++++ .|.++++|++|+|++|. ++.+++..|.++++|++|+|++ |+++. ..+..
T Consensus 25 ~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~-i~~~~ 100 (239)
T 2xwt_C 25 RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTY-IDPDA 100 (239)
T ss_dssp SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCE-ECTTS
T ss_pred ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeE-cCHHH
Confidence 4555 33 377888888888887666 67778888888888886 7777777788888888888887 77774 22356
Q ss_pred ccCCCCCCEEEccCccccccCCCCCCCCCCCCCc---EEEcccc-cccccCCCCcccccccceeccCCCCCCccCCCccc
Q 002238 160 LRNASGLQNFSANSANITGQIPSFFGPDEFPGLT---ILHLAFN-QLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDV 235 (948)
Q Consensus 160 ~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~---~L~Ls~N-~l~~~~p~~~~~~~l~~l~~~~~~~~~~~~~~~~~ 235 (948)
|.++++|++|++++|++++ +|. |. .+++|+ +|+|++| ++++..+..|
T Consensus 101 f~~l~~L~~L~l~~n~l~~-lp~-~~--~l~~L~~L~~L~l~~N~~l~~i~~~~~------------------------- 151 (239)
T 2xwt_C 101 LKELPLLKFLGIFNTGLKM-FPD-LT--KVYSTDIFFILEITDNPYMTSIPVNAF------------------------- 151 (239)
T ss_dssp EECCTTCCEEEEEEECCCS-CCC-CT--TCCBCCSEEEEEEESCTTCCEECTTTT-------------------------
T ss_pred hCCCCCCCEEeCCCCCCcc-ccc-cc--cccccccccEEECCCCcchhhcCcccc-------------------------
Confidence 7778888888888888876 454 44 666776 8888888 7775544443
Q ss_pred cccCCCcc-EEEccCCcccccCCCCCCCCCCcEEeccCCc-cccccchhhhCC-CCCcEEEcccCcccccCCC
Q 002238 236 IQNMTSLK-EIWLHSNAFSGPLPDFSGVKQLESLSLRDNF-FTGPVPDSLVKL-ESLKIVNMTNNLLQGPVPE 305 (948)
Q Consensus 236 l~~l~~L~-~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~-l~~~~p~~l~~l-~~L~~L~Ls~N~l~g~~p~ 305 (948)
.++++|+ +|+|++|+++..++.....++|+.|+|++|+ +++..+..|..+ ++|+.|+|++|++++.++.
T Consensus 152 -~~l~~L~~~L~l~~n~l~~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~ 223 (239)
T 2xwt_C 152 -QGLCNETLTLKLYNNGFTSVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK 223 (239)
T ss_dssp -TTTBSSEEEEECCSCCCCEECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT
T ss_pred -cchhcceeEEEcCCCCCcccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh
Confidence 3677788 8888888877544433333678888888884 775556667777 7888888888888755443
No 333
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=6.3e-22 Score=215.68 Aligned_cols=189 Identities=24% Similarity=0.364 Sum_probs=94.7
Q ss_pred CEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCCCcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEccC
Q 002238 69 RITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDN 148 (948)
Q Consensus 69 ~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 148 (948)
+++.|++++|+++. ++ .+..+++|++|+|++|.+++..+ +.++++|++|+|++|.+++++ .+..+++|+.|+|++
T Consensus 42 ~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~-~~~l~~L~~L~L~~n~l~~~~--~~~~l~~L~~L~l~~ 116 (308)
T 1h6u_A 42 GITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP-LKNLTKITELELSGNPLKNVS--AIAGLQSIKTLDLTS 116 (308)
T ss_dssp TCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG-GTTCCSCCEEECCSCCCSCCG--GGTTCTTCCEEECTT
T ss_pred CcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh-HccCCCCCEEEccCCcCCCch--hhcCCCCCCEEECCC
Confidence 45555555555542 33 35555555555555555555444 555555555555555555542 355555555555555
Q ss_pred CCCCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccccCCCCcccccccceeccCCCCCCc
Q 002238 149 NPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAK 228 (948)
Q Consensus 149 N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~~ 228 (948)
|+++. ++. +..+++|++|++++|++++..+ +. .+++|++|+|++|++++..+
T Consensus 117 n~l~~--~~~-l~~l~~L~~L~l~~n~l~~~~~--l~--~l~~L~~L~l~~n~l~~~~~--------------------- 168 (308)
T 1h6u_A 117 TQITD--VTP-LAGLSNLQVLYLDLNQITNISP--LA--GLTNLQYLSIGNAQVSDLTP--------------------- 168 (308)
T ss_dssp SCCCC--CGG-GTTCTTCCEEECCSSCCCCCGG--GG--GCTTCCEEECCSSCCCCCGG---------------------
T ss_pred CCCCC--chh-hcCCCCCCEEECCCCccCcCcc--cc--CCCCccEEEccCCcCCCChh---------------------
Confidence 55553 222 4555555555555555554333 32 45555555555555542211
Q ss_pred cCCCccccccCCCccEEEccCCcccccCCCCCCCCCCcEEeccCCccccccchhhhCCCCCcEEEcccCccc
Q 002238 229 LGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQ 300 (948)
Q Consensus 229 ~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 300 (948)
+.++++|+.|+|++|++++..+ +..+++|+.|+|++|++++..| +..+++|+.|+|++|+++
T Consensus 169 -------l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 169 -------LANLSKLTTLKADDNKISDISP-LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp -------GTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEE
T ss_pred -------hcCCCCCCEEECCCCccCcChh-hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeee
Confidence 1244555555555555554332 4445555555555555553322 455555555555555554
No 334
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.87 E-value=1.6e-22 Score=216.77 Aligned_cols=155 Identities=15% Similarity=0.091 Sum_probs=122.0
Q ss_pred HHHHHHhhcCCcccceecccCceEEEEEEEcCCcEEEEEEeecCcCCh----------------hhHHHHHHHHHHHHhc
Q 002238 585 IQVLRNVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISG----------------KGLTEFKSEIAVLTKV 648 (948)
Q Consensus 585 ~~~l~~~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~----------------~~~~~~~~E~~~l~~l 648 (948)
+..+......|++.+.||+|+||.||+|...+|+.||||+++...... .....+.+|+++++++
T Consensus 82 l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l 161 (282)
T 1zar_A 82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL 161 (282)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc
Confidence 334444556788889999999999999998779999999986432111 1356789999999999
Q ss_pred CCCceeeEEeEEEeCCceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCc
Q 002238 649 RHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPS 728 (948)
Q Consensus 649 ~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~ 728 (948)
+| +++.+++. .+..++||||+++|+|.+ +.. .....++.|++.||+|||+ .+|+||||||+
T Consensus 162 ~~---~~v~~~~~-~~~~~lvmE~~~g~~L~~-l~~-----------~~~~~i~~qi~~~l~~lH~---~giiHrDlkp~ 222 (282)
T 1zar_A 162 QG---LAVPKVYA-WEGNAVLMELIDAKELYR-VRV-----------ENPDEVLDMILEEVAKFYH---RGIVHGDLSQY 222 (282)
T ss_dssp TT---SSSCCEEE-EETTEEEEECCCCEEGGG-CCC-----------SCHHHHHHHHHHHHHHHHH---TTEECSCCSTT
T ss_pred cC---CCcCeEEe-ccceEEEEEecCCCcHHH-cch-----------hhHHHHHHHHHHHHHHHHH---CCCEeCCCCHH
Confidence 94 55555443 356699999999999987 411 1244699999999999997 89999999999
Q ss_pred cEEEcCCCCeEEeecCCceecCCCCCceeeeecccccccCceecc
Q 002238 729 NILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAV 773 (948)
Q Consensus 729 Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~ 773 (948)
|||++ ++.+||+|||+|+. +..|+|||++.
T Consensus 223 NILl~-~~~vkl~DFG~a~~--------------~~~~~a~e~l~ 252 (282)
T 1zar_A 223 NVLVS-EEGIWIIDFPQSVE--------------VGEEGWREILE 252 (282)
T ss_dssp SEEEE-TTEEEECCCTTCEE--------------TTSTTHHHHHH
T ss_pred HEEEE-CCcEEEEECCCCeE--------------CCCCCHHHHHH
Confidence 99999 99999999999863 34578899874
No 335
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.87 E-value=3.3e-24 Score=237.45 Aligned_cols=142 Identities=15% Similarity=0.219 Sum_probs=100.5
Q ss_pred CCCCccceEEeCCCCEEEEEeCCCCCcCCCCccccCC--CCCcEEEcccCCCCCCCCCcCCCCCCcEEEcccccccCC-C
Q 002238 55 DPCKWNHVVCIEDKRITRIQIGHQNLQGTLPSNLQNL--TKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSV-P 131 (948)
Q Consensus 55 ~~C~w~gv~c~~~~~v~~l~l~~~~l~~~~p~~l~~l--~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~-~ 131 (948)
-|..|.++.|+ ...++.++++++++. +..+..+ ++++.|++++|.+.+.++.+.++++|++|+|++|.+++. .
T Consensus 35 vc~~W~~~~~~-~~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~ 110 (336)
T 2ast_B 35 VCKRWYRLASD-ESLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTL 110 (336)
T ss_dssp SCHHHHHHHTC-STTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHH
T ss_pred HHHHHHHHhcC-chhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHH
Confidence 34469888875 446778888888776 4456666 788888888888888777777788888888888887764 6
Q ss_pred CccccCCCCCCEEEccCCCCCCCCCCccccCCCCCCEEEccCc-ccccc-CCCCCCCCCCCCCcEEEcccc-ccc
Q 002238 132 SDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSA-NITGQ-IPSFFGPDEFPGLTILHLAFN-QLI 203 (948)
Q Consensus 132 ~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n-~l~~~-~p~~~~~~~l~~L~~L~Ls~N-~l~ 203 (948)
+..+..+++|++|+|++|++++ ..+..+..+++|++|++++| .+++. ++..+. .+++|++|+|++| .++
T Consensus 111 ~~~~~~~~~L~~L~L~~~~l~~-~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~--~~~~L~~L~l~~~~~l~ 182 (336)
T 2ast_B 111 HGILSQCSKLQNLSLEGLRLSD-PIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLS--SCSRLDELNLSWCFDFT 182 (336)
T ss_dssp HHHHTTBCCCSEEECTTCBCCH-HHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHH--HCTTCCEEECCCCTTCC
T ss_pred HHHHhhCCCCCEEeCcCcccCH-HHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHh--cCCCCCEEcCCCCCCcC
Confidence 6667778888888888887765 45666666777777777776 45542 344343 5566666666666 554
No 336
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.87 E-value=9.7e-22 Score=206.08 Aligned_cols=196 Identities=18% Similarity=0.229 Sum_probs=172.1
Q ss_pred CCEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCC-CCCCCC-CcCCCCCCcEEEccc-ccccCCCCccccCCCCCCEE
Q 002238 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNS-ISGPLP-SLNGLASLEVVMLSN-NQFTSVPSDFFTGLSSLQSI 144 (948)
Q Consensus 68 ~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~-l~~~~p-~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L 144 (948)
..++.|++++|++++..+..|.++++|++|+|++|. ++.+.+ .|.++++|++|+|++ |+++++++..|.++++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 479999999999998777799999999999999997 888777 799999999999999 99999999999999999999
Q ss_pred EccCCCCCCCCCCccccCCCCCC---EEEccCc-cccccCCCCCCCCCCCCCc-EEEcccccccccCCCCccccccccee
Q 002238 145 EIDNNPFSSWEIPQSLRNASGLQ---NFSANSA-NITGQIPSFFGPDEFPGLT-ILHLAFNQLIGGLPASFSGSQIQSLW 219 (948)
Q Consensus 145 ~Ls~N~l~~~~~p~~~~~l~~L~---~L~l~~n-~l~~~~p~~~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~~~l~~l~ 219 (948)
+|++|+++ .+|. +..+++|+ +|++++| ++++..+..|. .+++|+ +|+|++|+++ .+|...
T Consensus 111 ~l~~n~l~--~lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~--~l~~L~~~L~l~~n~l~-~i~~~~--------- 175 (239)
T 2xwt_C 111 GIFNTGLK--MFPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQ--GLCNETLTLKLYNNGFT-SVQGYA--------- 175 (239)
T ss_dssp EEEEECCC--SCCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTT--TTBSSEEEEECCSCCCC-EECTTT---------
T ss_pred eCCCCCCc--cccc-cccccccccccEEECCCCcchhhcCccccc--chhcceeEEEcCCCCCc-ccCHhh---------
Confidence 99999999 4676 88888888 9999999 99988888887 899999 9999999998 555432
Q ss_pred ccCCCCCCccCCCccccccCCCccEEEccCCc-ccccCC-CCCCC-CCCcEEeccCCccccccchhhhCCCCCcEEEccc
Q 002238 220 VNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNA-FSGPLP-DFSGV-KQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTN 296 (948)
Q Consensus 220 ~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~-l~~~~~-~~~~l-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~ 296 (948)
+.. ++|+.|+|++|+ +++..+ .|.++ ++|+.|+|++|+++ .+|.. .+++|+.|++++
T Consensus 176 ----------------~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~-~l~~~--~~~~L~~L~l~~ 235 (239)
T 2xwt_C 176 ----------------FNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT-ALPSK--GLEHLKELIARN 235 (239)
T ss_dssp ----------------TTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCC-CCCCT--TCTTCSEEECTT
T ss_pred ----------------cCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccc-cCChh--HhccCceeeccC
Confidence 223 799999999995 997766 47888 99999999999999 56654 688999999987
Q ss_pred Cc
Q 002238 297 NL 298 (948)
Q Consensus 297 N~ 298 (948)
+.
T Consensus 236 ~~ 237 (239)
T 2xwt_C 236 TW 237 (239)
T ss_dssp C-
T ss_pred cc
Confidence 63
No 337
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.87 E-value=2.2e-22 Score=219.90 Aligned_cols=202 Identities=14% Similarity=0.151 Sum_probs=95.3
Q ss_pred EEEEEeCCCCCcCCCCccc--cCCCCCcEEEcccCCCCCCCC-----CcCCCCCCcEEEcccccccCCCCccccCCCCCC
Q 002238 70 ITRIQIGHQNLQGTLPSNL--QNLTKLERLELQWNSISGPLP-----SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQ 142 (948)
Q Consensus 70 v~~l~l~~~~l~~~~p~~l--~~l~~L~~L~L~~N~l~~~~p-----~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 142 (948)
+++|++++|++++.+|..+ .++++|++|+|++|.+++..+ .+..+++|++|+|++|+++++++..|+.+++|+
T Consensus 93 L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 172 (310)
T 4glp_A 93 LKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALT 172 (310)
T ss_dssp CCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCC
T ss_pred eeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCC
Confidence 5555555555555555544 455555555555555554332 123355555555555555555555555555555
Q ss_pred EEEccCCCCCC---CCCCccccCCCCCCEEEccCccccccCCC---CCCCCCCCCCcEEEcccccccccCCCCccccccc
Q 002238 143 SIEIDNNPFSS---WEIPQSLRNASGLQNFSANSANITGQIPS---FFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQ 216 (948)
Q Consensus 143 ~L~Ls~N~l~~---~~~p~~~~~l~~L~~L~l~~n~l~~~~p~---~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~ 216 (948)
+|+|++|++.+ ...+..+..+++|++|+|++|+++...+. .+. .+++|++|+|++|++++.+|..+..
T Consensus 173 ~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~--~l~~L~~L~Ls~N~l~~~~p~~~~~---- 246 (310)
T 4glp_A 173 SLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAA--AGVQPHSLDLSHNSLRATVNPSAPR---- 246 (310)
T ss_dssp EEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHH--HTCCCSSEECTTSCCCCCCCSCCSS----
T ss_pred EEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHh--cCCCCCEEECCCCCCCccchhhHHh----
Confidence 55555555432 00112223455555555555555421110 112 3455555555555555444443320
Q ss_pred ceeccCCCCCCccCCCccccccCCCccEEEccCCcccccCCCCCCCCCCcEEeccCCccccccchhhhCCCCCcEEEccc
Q 002238 217 SLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTN 296 (948)
Q Consensus 217 ~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~ 296 (948)
+..+++|++|+|++|+++..+..+. ++|+.|+|++|+|++. |. +..+++|+.|+|++
T Consensus 247 -------------------~~~~~~L~~L~Ls~N~l~~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~ 303 (310)
T 4glp_A 247 -------------------CMWSSALNSLNLSFAGLEQVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDG 303 (310)
T ss_dssp -------------------CCCCTTCCCEECCSSCCCSCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSS
T ss_pred -------------------ccCcCcCCEEECCCCCCCchhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcC
Confidence 1112455555555555553322232 4555555555555532 32 34555555555555
Q ss_pred Cccc
Q 002238 297 NLLQ 300 (948)
Q Consensus 297 N~l~ 300 (948)
|+++
T Consensus 304 N~l~ 307 (310)
T 4glp_A 304 NPFL 307 (310)
T ss_dssp TTTS
T ss_pred CCCC
Confidence 5554
No 338
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.86 E-value=2e-24 Score=243.92 Aligned_cols=66 Identities=17% Similarity=0.182 Sum_probs=46.9
Q ss_pred CceEEEEccCCccccc----CCccc--cCccccceEeCccccccc----cCCcCC-cCCCCCcEEEccCCcccCCCC
Q 002238 370 GNITVINFQKMNLTGT----ISPEF--ASFKSLQRLILADNNLSG----MIPEGL-SVLGALKELDVSNNQLYGKIP 435 (948)
Q Consensus 370 ~~L~~L~ls~n~l~g~----ip~~~--~~l~~L~~L~Ls~N~l~g----~ip~~l-~~l~~L~~L~ls~N~l~g~ip 435 (948)
++|+.|+|++|.+++. +|..+ +.+++|+.|+|++|++++ .+|..+ .++++|++|+|++|++++..|
T Consensus 244 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 244 PNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp TTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred CCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 3555555665555544 45555 347888888888888887 477777 667888888888888887653
No 339
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.86 E-value=1.2e-23 Score=235.04 Aligned_cols=265 Identities=12% Similarity=0.133 Sum_probs=200.0
Q ss_pred EEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC-----CcCCCC-CCcEEEcccccccCCCCccccCC-----CC
Q 002238 72 RIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-----SLNGLA-SLEVVMLSNNQFTSVPSDFFTGL-----SS 140 (948)
Q Consensus 72 ~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-----~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l-----~~ 140 (948)
..++++|+++|.+|..+...++|++|+|++|.|++..+ .|.+++ +|++|+|++|.+++..+..|..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 36789999999998888888889999999999988664 477788 89999999999999888877775 99
Q ss_pred CCEEEccCCCCCCCCCCcc----ccCC-CCCCEEEccCccccccCCCCCC--CCC-CCCCcEEEcccccccccCCCCccc
Q 002238 141 LQSIEIDNNPFSSWEIPQS----LRNA-SGLQNFSANSANITGQIPSFFG--PDE-FPGLTILHLAFNQLIGGLPASFSG 212 (948)
Q Consensus 141 L~~L~Ls~N~l~~~~~p~~----~~~l-~~L~~L~l~~n~l~~~~p~~~~--~~~-l~~L~~L~Ls~N~l~~~~p~~~~~ 212 (948)
|++|+|++|+++. ..+.. +..+ ++|++|+|++|++++..+..+. ... .++|++|+|++|+++...+..+.
T Consensus 82 L~~L~Ls~n~l~~-~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~- 159 (362)
T 3goz_A 82 VTSLNLSGNFLSY-KSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELI- 159 (362)
T ss_dssp CCEEECCSSCGGG-SCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHH-
T ss_pred ccEEECcCCcCCh-HHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHH-
Confidence 9999999999985 44443 4444 8999999999999877665442 013 35899999999999864443332
Q ss_pred ccccceeccCCCCCCccCCCccccccCC-CccEEEccCCcccccCC-----CCCCC-CCCcEEeccCCccccc----cch
Q 002238 213 SQIQSLWVNGQNGNAKLGGGIDVIQNMT-SLKEIWLHSNAFSGPLP-----DFSGV-KQLESLSLRDNFFTGP----VPD 281 (948)
Q Consensus 213 ~~l~~l~~~~~~~~~~~~~~~~~l~~l~-~L~~L~Ls~N~l~~~~~-----~~~~l-~~L~~L~L~~N~l~~~----~p~ 281 (948)
..+..++ +|++|+|++|++++..+ .+... ++|+.|+|++|.|++. ++.
T Consensus 160 ---------------------~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~ 218 (362)
T 3goz_A 160 ---------------------QILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAY 218 (362)
T ss_dssp ---------------------HHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHH
T ss_pred ---------------------HHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHH
Confidence 2234455 89999999999987654 23444 5999999999999853 566
Q ss_pred hhhCC-CCCcEEEcccCcccccCCCCCCccccccccccCCCCCCCCCCCchhhhhhHHHHHhhCCcchhccccCCCCCCC
Q 002238 282 SLVKL-ESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCS 360 (948)
Q Consensus 282 ~l~~l-~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 360 (948)
.+..+ ++|++|+|++|++++..+. .+.
T Consensus 219 ~l~~~~~~L~~L~Ls~N~l~~~~~~--------------------------------~l~-------------------- 246 (362)
T 3goz_A 219 IFSSIPNHVVSLNLCLNCLHGPSLE--------------------------------NLK-------------------- 246 (362)
T ss_dssp HHHHSCTTCCEEECCSSCCCCCCHH--------------------------------HHH--------------------
T ss_pred HHhcCCCCceEEECcCCCCCcHHHH--------------------------------HHH--------------------
Confidence 67664 5999999999998753321 000
Q ss_pred CccceeecCCceEEEEccCCcccc-------cCCccccCccccceEeCccccccccCCcCC
Q 002238 361 DWIGVTCTKGNITVINFQKMNLTG-------TISPEFASFKSLQRLILADNNLSGMIPEGL 414 (948)
Q Consensus 361 ~~~~~~~~~~~L~~L~ls~n~l~g-------~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l 414 (948)
..+..+++|+.|+|++|.+.+ .++..+.++++|+.|||++|++.+..|..+
T Consensus 247 ---~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~~~~ 304 (362)
T 3goz_A 247 ---LLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSIPI 304 (362)
T ss_dssp ---HTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGCHHH
T ss_pred ---HHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcchHHH
Confidence 011234578999999998543 344567788999999999999987755444
No 340
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.86 E-value=7.6e-21 Score=200.78 Aligned_cols=176 Identities=23% Similarity=0.289 Sum_probs=123.1
Q ss_pred CCcEEEcccCCCCCCCCCcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEccCCCCCCCCCCccccCCCCCCEEEcc
Q 002238 93 KLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSAN 172 (948)
Q Consensus 93 ~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~ 172 (948)
..++++++++.++.+++.+. ++|+.|+|++|.++++++..|.++++|++|+|++|+++
T Consensus 15 ~~~~l~~~~~~l~~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-------------------- 72 (251)
T 3m19_A 15 GKKEVDCQGKSLDSVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQ-------------------- 72 (251)
T ss_dssp GGTEEECTTCCCSSCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCC--------------------
T ss_pred CCeEEecCCCCccccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCC--------------------
Confidence 34566666666665444433 45666666666666665555555555555555555555
Q ss_pred CccccccCCCCCCCCCCCCCcEEEcccccccccCCCCcccccccceeccCCCCCCccCCCccccccCCCccEEEccCCcc
Q 002238 173 SANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAF 252 (948)
Q Consensus 173 ~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l 252 (948)
+..+..|. .+++|++|+|++|++++..+..| .++++|++|+|++|++
T Consensus 73 -----~~~~~~~~--~l~~L~~L~L~~n~l~~~~~~~~--------------------------~~l~~L~~L~L~~N~l 119 (251)
T 3m19_A 73 -----TLSAGVFD--DLTELGTLGLANNQLASLPLGVF--------------------------DHLTQLDKLYLGGNQL 119 (251)
T ss_dssp -----CCCTTTTT--TCTTCCEEECTTSCCCCCCTTTT--------------------------TTCTTCCEEECCSSCC
T ss_pred -----ccCHhHhc--cCCcCCEEECCCCcccccChhHh--------------------------cccCCCCEEEcCCCcC
Confidence 44444454 56666666666666664444333 3567777777777777
Q ss_pred cccCCC-CCCCCCCcEEeccCCccccccchhhhCCCCCcEEEcccCcccccCCC-CCCccccccccccCCCCC
Q 002238 253 SGPLPD-FSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPE-FDRSVSLDMAKGSNNFCL 323 (948)
Q Consensus 253 ~~~~~~-~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~~~l~~~~~~~~~~~ 323 (948)
++.++. |.++++|+.|+|++|+|++..+..|..+++|++|+|++|++++.++. +..+.+|..+++.+|...
T Consensus 120 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 192 (251)
T 3m19_A 120 KSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFD 192 (251)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC
T ss_pred CCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCcee
Confidence 766664 67789999999999999977777899999999999999999988774 677888888888888643
No 341
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.86 E-value=3.3e-21 Score=209.94 Aligned_cols=197 Identities=21% Similarity=0.344 Sum_probs=170.3
Q ss_pred ccCCCCCcEEEcccCCCCCCCCCcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEccCCCCCCCCCCccccCCCCCC
Q 002238 88 LQNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQ 167 (948)
Q Consensus 88 l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~ 167 (948)
+.++++|++|++++|.++.. +.+..+++|++|+|++|.++++++ +..+++|++|+|++|+++. ++ .+..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~l-~~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~--~~-~~~~l~~L~ 110 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTTI-EGVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN--VS-AIAGLQSIK 110 (308)
T ss_dssp HHHHHTCCEEECTTSCCCCC-TTGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC--CG-GGTTCTTCC
T ss_pred HHHcCCcCEEEeeCCCccCc-hhhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC--ch-hhcCCCCCC
Confidence 45688999999999999874 578999999999999999999887 9999999999999999985 44 799999999
Q ss_pred EEEccCccccccCCCCCCCCCCCCCcEEEcccccccccCCCCcccccccceeccCCCCCCccCCCccccccCCCccEEEc
Q 002238 168 NFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWL 247 (948)
Q Consensus 168 ~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~L 247 (948)
+|++++|++++..+ +. .+++|++|+|++|++++..+ +.++++|+.|+|
T Consensus 111 ~L~l~~n~l~~~~~--l~--~l~~L~~L~l~~n~l~~~~~----------------------------l~~l~~L~~L~l 158 (308)
T 1h6u_A 111 TLDLTSTQITDVTP--LA--GLSNLQVLYLDLNQITNISP----------------------------LAGLTNLQYLSI 158 (308)
T ss_dssp EEECTTSCCCCCGG--GT--TCTTCCEEECCSSCCCCCGG----------------------------GGGCTTCCEEEC
T ss_pred EEECCCCCCCCchh--hc--CCCCCCEEECCCCccCcCcc----------------------------ccCCCCccEEEc
Confidence 99999999997543 55 89999999999999985433 347899999999
Q ss_pred cCCcccccCCCCCCCCCCcEEeccCCccccccchhhhCCCCCcEEEcccCcccccCCCCCCccccccccccCCCCCCCC
Q 002238 248 HSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSP 326 (948)
Q Consensus 248 s~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~~~~ 326 (948)
++|++++..+ +..+++|+.|+|++|++++..+ +..+++|++|+|++|++++..| +..+.+|..++..+|.+...+
T Consensus 159 ~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~l~~N~i~~~~ 233 (308)
T 1h6u_A 159 GNAQVSDLTP-LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP-LANTSNLFIVTLTNQTITNQP 233 (308)
T ss_dssp CSSCCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG-GTTCTTCCEEEEEEEEEECCC
T ss_pred cCCcCCCChh-hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc-ccCCCCCCEEEccCCeeecCC
Confidence 9999997655 8889999999999999995444 8999999999999999998765 778888888888888765544
No 342
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.85 E-value=7.3e-21 Score=211.42 Aligned_cols=196 Identities=17% Similarity=0.209 Sum_probs=142.3
Q ss_pred EeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEcccccccC-CCCccccCCCCCCE-EEccCCC
Q 002238 74 QIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTS-VPSDFFTGLSSLQS-IEIDNNP 150 (948)
Q Consensus 74 ~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~-L~Ls~N~ 150 (948)
+.++++|+ .+|..+. ++|++|+|++|+|+.+++ +|.++++|++|+|++|++.+ +++++|.++++|+. +.++.|+
T Consensus 15 ~C~~~~Lt-~iP~~l~--~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~ 91 (350)
T 4ay9_X 15 LCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANN 91 (350)
T ss_dssp EEESTTCC-SCCTTCC--TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETT
T ss_pred EecCCCCC-ccCcCcC--CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCc
Confidence 33456677 6776663 678999999999998776 68899999999999999865 56678888888775 5667788
Q ss_pred CCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEccc-ccccccCCCCcccccccceeccCCCCCCcc
Q 002238 151 FSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAF-NQLIGGLPASFSGSQIQSLWVNGQNGNAKL 229 (948)
Q Consensus 151 l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~~~l~~l~~~~~~~~~~~ 229 (948)
++. ..|..|..+++|++|++++|+|+...+..+. ...++..|++.+ |++....+..|.
T Consensus 92 l~~-l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~--~~~~l~~l~l~~~~~i~~l~~~~f~------------------ 150 (350)
T 4ay9_X 92 LLY-INPEAFQNLPNLQYLLISNTGIKHLPDVHKI--HSLQKVLLDIQDNINIHTIERNSFV------------------ 150 (350)
T ss_dssp CCE-ECTTSBCCCTTCCEEEEEEECCSSCCCCTTC--CBSSCEEEEEESCTTCCEECTTSST------------------
T ss_pred ccc-cCchhhhhccccccccccccccccCCchhhc--ccchhhhhhhccccccccccccchh------------------
Confidence 884 3366788888888888888888877666654 566777888765 455544333332
Q ss_pred CCCccccccC-CCccEEEccCCcccccCCCCCCCCCCcEEeccC-Cccccccc-hhhhCCCCCcEEEcccCccccc
Q 002238 230 GGGIDVIQNM-TSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRD-NFFTGPVP-DSLVKLESLKIVNMTNNLLQGP 302 (948)
Q Consensus 230 ~~~~~~l~~l-~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~-N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~g~ 302 (948)
.+ ..++.|+|++|+|+...+......+|+.|++.+ |.++ .+| ..|..+++|++|+|++|+|+..
T Consensus 151 --------~~~~~l~~L~L~~N~i~~i~~~~f~~~~L~~l~l~~~n~l~-~i~~~~f~~l~~L~~LdLs~N~l~~l 217 (350)
T 4ay9_X 151 --------GLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNNLE-ELPNDVFHGASGPVILDISRTRIHSL 217 (350)
T ss_dssp --------TSBSSCEEEECCSSCCCEECTTSSTTEEEEEEECTTCTTCC-CCCTTTTTTEECCSEEECTTSCCCCC
T ss_pred --------hcchhhhhhccccccccCCChhhccccchhHHhhccCCccc-CCCHHHhccCcccchhhcCCCCcCcc
Confidence 33 357788888888887666655566788888875 5555 454 4567788888888888887743
No 343
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.85 E-value=2.2e-21 Score=226.74 Aligned_cols=197 Identities=24% Similarity=0.398 Sum_probs=167.3
Q ss_pred CCCCC-----Cccce-EEeCCCCEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCCCcCCCCCCcEEEccccc
Q 002238 53 DTDPC-----KWNHV-VCIEDKRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQ 126 (948)
Q Consensus 53 ~~~~C-----~w~gv-~c~~~~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~ 126 (948)
+.+|| .|.|+ .|. .++++.|+|++|+|++ +|..+. ++|++|+|++|+|+. +| ..+++|++|+|++|+
T Consensus 39 ~~~~~~~~~~~~~~l~~C~-~~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~~-ip--~~l~~L~~L~Ls~N~ 111 (571)
T 3cvr_A 39 QALPGENRNEAVSLLKECL-INQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALIS-LP--ELPASLEYLDACDNR 111 (571)
T ss_dssp TCCTTCCHHHHHHHHHHHH-HTTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCSC-CC--CCCTTCCEEECCSSC
T ss_pred cCCccccccchhhhccccc-cCCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCcc-cc--cccCCCCEEEccCCC
Confidence 45778 69999 785 3589999999999997 887664 889999999999995 44 558999999999999
Q ss_pred ccCCCCccccCCCCCCEEEccCCCCCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccccC
Q 002238 127 FTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGL 206 (948)
Q Consensus 127 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~ 206 (948)
|++++. |.. +|+.|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|++|+|++|+|++ +
T Consensus 112 l~~ip~--l~~--~L~~L~Ls~N~l~~--lp~---~l~~L~~L~Ls~N~l~~-lp~-----~l~~L~~L~Ls~N~L~~-l 175 (571)
T 3cvr_A 112 LSTLPE--LPA--SLKHLDVDNNQLTM--LPE---LPALLEYINADNNQLTM-LPE-----LPTSLEVLSVRNNQLTF-L 175 (571)
T ss_dssp CSCCCC--CCT--TCCEEECCSSCCSC--CCC---CCTTCCEEECCSSCCSC-CCC-----CCTTCCEEECCSSCCSC-C
T ss_pred CCCcch--hhc--CCCEEECCCCcCCC--CCC---cCccccEEeCCCCccCc-CCC-----cCCCcCEEECCCCCCCC-c
Confidence 999665 655 99999999999995 677 68999999999999997 554 36899999999999986 6
Q ss_pred CCCcccccccceeccCCCCCCccCCCccccccCCCccEEEccCCcccccCCCCCCCCCC-------cEEeccCCcccccc
Q 002238 207 PASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQL-------ESLSLRDNFFTGPV 279 (948)
Q Consensus 207 p~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L-------~~L~L~~N~l~~~~ 279 (948)
|. | . ++|+.|+|++|+|+..++ +.. +| +.|+|++|+|+ .+
T Consensus 176 p~-l---------------------------~-~~L~~L~Ls~N~L~~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~l 222 (571)
T 3cvr_A 176 PE-L---------------------------P-ESLEALDVSTNLLESLPA-VPV--RNHHSEETEIFFRCRENRIT-HI 222 (571)
T ss_dssp CC-C---------------------------C-TTCCEEECCSSCCSSCCC-CC----------CCEEEECCSSCCC-CC
T ss_pred ch-h---------------------------h-CCCCEEECcCCCCCchhh-HHH--hhhcccccceEEecCCCcce-ec
Confidence 65 4 1 799999999999995444 554 77 99999999999 78
Q ss_pred chhhhCCCCCcEEEcccCcccccCCC
Q 002238 280 PDSLVKLESLKIVNMTNNLLQGPVPE 305 (948)
Q Consensus 280 p~~l~~l~~L~~L~Ls~N~l~g~~p~ 305 (948)
|..+..+++|+.|+|++|+|++.+|.
T Consensus 223 p~~l~~l~~L~~L~L~~N~l~~~~p~ 248 (571)
T 3cvr_A 223 PENILSLDPTCTIILEDNPLSSRIRE 248 (571)
T ss_dssp CGGGGGSCTTEEEECCSSSCCHHHHH
T ss_pred CHHHhcCCCCCEEEeeCCcCCCcCHH
Confidence 99999999999999999999987774
No 344
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.85 E-value=5.8e-21 Score=195.51 Aligned_cols=183 Identities=25% Similarity=0.366 Sum_probs=148.9
Q ss_pred CCccceEEeCCCCEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEcccccccCCCCccc
Q 002238 57 CKWNHVVCIEDKRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFF 135 (948)
Q Consensus 57 C~w~gv~c~~~~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~~~ 135 (948)
|.|.+|.|.. ++++ .+|..+ .++|++|+|++|+|++.++ .|.++++|++|+|++|+++++++..|
T Consensus 7 C~~~~v~c~~-----------~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 72 (208)
T 2o6s_A 7 CSGTTVECYS-----------QGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVF 72 (208)
T ss_dssp EETTEEECCS-----------SCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTT
T ss_pred ECCCEEEecC-----------CCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhc
Confidence 6899888853 3344 455444 3689999999999998777 47889999999999999999999889
Q ss_pred cCCCCCCEEEccCCCCCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccccCCCCcccccc
Q 002238 136 TGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQI 215 (948)
Q Consensus 136 ~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l 215 (948)
..+++|++|+|++|+++. ..+..+..+++|++|++++|++++..+..|. .+++|++|+|++|++++..+..|
T Consensus 73 ~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~l~~N~l~~~~~~~~----- 144 (208)
T 2o6s_A 73 NKLTSLTYLNLSTNQLQS-LPNGVFDKLTQLKELALNTNQLQSLPDGVFD--KLTQLKDLRLYQNQLKSVPDGVF----- 144 (208)
T ss_dssp TTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCCCCCTTTTT--TCTTCCEEECCSSCCSCCCTTTT-----
T ss_pred CCCCCcCEEECCCCcCCc-cCHhHhcCccCCCEEEcCCCcCcccCHhHhc--cCCcCCEEECCCCccceeCHHHh-----
Confidence 999999999999999985 3345578899999999999999988777776 78999999999999886555443
Q ss_pred cceeccCCCCCCccCCCccccccCCCccEEEccCCcccccCCCCCCCCCCcEEeccCCccccccchhhhCCCC
Q 002238 216 QSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLES 288 (948)
Q Consensus 216 ~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 288 (948)
.++++|+.|+|++|.+.+. ++.|+.|++..|+++|.+|..++.++.
T Consensus 145 ---------------------~~l~~L~~L~l~~N~~~~~------~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 145 ---------------------DRLTSLQYIWLHDNPWDCT------CPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp ---------------------TTCTTCCEEECCSCCBCCC------TTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred ---------------------ccCCCccEEEecCCCeecC------CCCHHHHHHHHHhCCceeeccCccccC
Confidence 3678899999999977754 347888888888888888888877664
No 345
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.85 E-value=4.5e-23 Score=232.87 Aligned_cols=253 Identities=17% Similarity=0.220 Sum_probs=196.3
Q ss_pred CCCccccCCCCCcEEEcccCCCCCCCC-----CcCCCCCCcEEEccccc---ccCCCCccc-------cCCCCCCEEEcc
Q 002238 83 TLPSNLQNLTKLERLELQWNSISGPLP-----SLNGLASLEVVMLSNNQ---FTSVPSDFF-------TGLSSLQSIEID 147 (948)
Q Consensus 83 ~~p~~l~~l~~L~~L~L~~N~l~~~~p-----~~~~l~~L~~L~L~~N~---l~~~~~~~~-------~~l~~L~~L~Ls 147 (948)
.++..+..+++|++|+|++|.|+...+ .+..+++|++|+|++|. +++..|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 566778888999999999999987432 47789999999999964 444555444 789999999999
Q ss_pred CCCCCCC---CCCccccCCCCCCEEEccCccccccCCCCCCC--CCC---------CCCcEEEccccccc-ccCCCCccc
Q 002238 148 NNPFSSW---EIPQSLRNASGLQNFSANSANITGQIPSFFGP--DEF---------PGLTILHLAFNQLI-GGLPASFSG 212 (948)
Q Consensus 148 ~N~l~~~---~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~--~~l---------~~L~~L~Ls~N~l~-~~~p~~~~~ 212 (948)
+|+++.. .+|..+.++++|++|+|++|.++...+..+.. ..+ ++|++|+|++|+++ +.++. +
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~-l-- 179 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKE-W-- 179 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHH-H--
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHH-H--
Confidence 9999852 16778899999999999999997655444430 022 89999999999987 33331 1
Q ss_pred ccccceeccCCCCCCccCCCccccccCCCccEEEccCCccc--c---cCC-CCCCCCCCcEEeccCCccc----cccchh
Q 002238 213 SQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFS--G---PLP-DFSGVKQLESLSLRDNFFT----GPVPDS 282 (948)
Q Consensus 213 ~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~--~---~~~-~~~~l~~L~~L~L~~N~l~----~~~p~~ 282 (948)
...+..+++|++|+|++|+++ + ..+ .+..+++|+.|+|++|.|+ +.+|..
T Consensus 180 --------------------~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~ 239 (386)
T 2ca6_A 180 --------------------AKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIA 239 (386)
T ss_dssp --------------------HHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHH
T ss_pred --------------------HHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHH
Confidence 123557899999999999998 3 345 6888999999999999996 688999
Q ss_pred hhCCCCCcEEEcccCcccccCCCCCCccccccccccCCCCCCCCCCCchhhhhhHHHHHhhCCcchhccccCCCCCCCCc
Q 002238 283 LVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDW 362 (948)
Q Consensus 283 l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (948)
+..+++|+.|+|++|.+++.-.. .+...+
T Consensus 240 l~~~~~L~~L~L~~n~i~~~~~~--------------------------------~l~~~l------------------- 268 (386)
T 2ca6_A 240 LKSWPNLRELGLNDCLLSARGAA--------------------------------AVVDAF------------------- 268 (386)
T ss_dssp GGGCTTCCEEECTTCCCCHHHHH--------------------------------HHHHHH-------------------
T ss_pred HccCCCcCEEECCCCCCchhhHH--------------------------------HHHHHH-------------------
Confidence 99999999999999998753110 000000
Q ss_pred cceeecCCceEEEEccCCcccc----cCCccc-cCccccceEeCccccccccCC
Q 002238 363 IGVTCTKGNITVINFQKMNLTG----TISPEF-ASFKSLQRLILADNNLSGMIP 411 (948)
Q Consensus 363 ~~~~~~~~~L~~L~ls~n~l~g----~ip~~~-~~l~~L~~L~Ls~N~l~g~ip 411 (948)
....+++|+.|+|++|.+++ .+|..+ .++++|++|+|++|++++..|
T Consensus 269 --~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 269 --SKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp --HTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred --hhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 00124689999999999998 588888 779999999999999997764
No 346
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.84 E-value=1.1e-20 Score=210.09 Aligned_cols=242 Identities=16% Similarity=0.138 Sum_probs=174.0
Q ss_pred cEEEcccCCCCCCCCCcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEccCCCCCCCCCC-ccccCCCCCCE-EEcc
Q 002238 95 ERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIP-QSLRNASGLQN-FSAN 172 (948)
Q Consensus 95 ~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p-~~~~~l~~L~~-L~l~ 172 (948)
++++.++++|+.++..+. ++|++|+|++|+|+.+++++|+++++|++|+|++|++.+ .+| ..|.++++|+. +.++
T Consensus 12 ~~v~C~~~~Lt~iP~~l~--~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~-~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVTEIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLE-VIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCCSCCTTCC--TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCC-EECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCCccCcCcC--CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCC-ccChhHhhcchhhhhhhccc
Confidence 568899999997665553 689999999999999999999999999999999999875 455 46788888765 6677
Q ss_pred CccccccCCCCCCCCCCCCCcEEEcccccccccCCCCcccccccceeccCCCCCCccCCCccccccCCCccEEEccC-Cc
Q 002238 173 SANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHS-NA 251 (948)
Q Consensus 173 ~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~-N~ 251 (948)
.|+|+...|..|. .+++|++|++++|++.+..+..+. ...++..|++.+ |+
T Consensus 89 ~N~l~~l~~~~f~--~l~~L~~L~l~~n~l~~~~~~~~~--------------------------~~~~l~~l~l~~~~~ 140 (350)
T 4ay9_X 89 ANNLLYINPEAFQ--NLPNLQYLLISNTGIKHLPDVHKI--------------------------HSLQKVLLDIQDNIN 140 (350)
T ss_dssp ETTCCEECTTSBC--CCTTCCEEEEEEECCSSCCCCTTC--------------------------CBSSCEEEEEESCTT
T ss_pred CCcccccCchhhh--hccccccccccccccccCCchhhc--------------------------ccchhhhhhhccccc
Confidence 7999988888887 899999999999999865554432 455677888865 45
Q ss_pred ccccCC-CCCCC-CCCcEEeccCCccccccchhhhCCCCCcEEEcccCcccccCCCCCCccccccccccCCCCCCCCCCC
Q 002238 252 FSGPLP-DFSGV-KQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGAC 329 (948)
Q Consensus 252 l~~~~~-~~~~l-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~~~~~~~ 329 (948)
+....+ .|.++ ..++.|+|++|+|+ .+|......++|+.|++++|+.-+.+|.
T Consensus 141 i~~l~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~~i~~------------------------ 195 (350)
T 4ay9_X 141 IHTIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELPN------------------------ 195 (350)
T ss_dssp CCEECTTSSTTSBSSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTCTTCCCCCT------------------------
T ss_pred cccccccchhhcchhhhhhcccccccc-CCChhhccccchhHHhhccCCcccCCCH------------------------
Confidence 665444 35554 46888889999888 5666666667888888875433334442
Q ss_pred chhhhhhHHHHHhhCCcchhccccCCCCCCCCccceeecCCceEEEEccCCcccccCCccccCccccceEeCcccccccc
Q 002238 330 DPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGM 409 (948)
Q Consensus 330 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ 409 (948)
+.|..+++|+.|+|++|+|+...+..|.+++.|+ +.++.--..
T Consensus 196 ----------------------------------~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~---~l~~~~l~~ 238 (350)
T 4ay9_X 196 ----------------------------------DVFHGASGPVILDISRTRIHSLPSYGLENLKKLR---ARSTYNLKK 238 (350)
T ss_dssp ----------------------------------TTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEE---CTTCTTCCC
T ss_pred ----------------------------------HHhccCcccchhhcCCCCcCccChhhhccchHhh---hccCCCcCc
Confidence 0122334778888888888755444454444444 333333336
Q ss_pred CCcCCcCCCCCcEEEccCCcc
Q 002238 410 IPEGLSVLGALKELDVSNNQL 430 (948)
Q Consensus 410 ip~~l~~l~~L~~L~ls~N~l 430 (948)
+| .+..+++|+.++++++.-
T Consensus 239 lP-~l~~l~~L~~l~l~~~~~ 258 (350)
T 4ay9_X 239 LP-TLEKLVALMEASLTYPSH 258 (350)
T ss_dssp CC-CTTTCCSCCEEECSCHHH
T ss_pred CC-CchhCcChhhCcCCCCcc
Confidence 66 477888888888876543
No 347
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.84 E-value=2e-22 Score=223.14 Aligned_cols=252 Identities=13% Similarity=0.149 Sum_probs=196.0
Q ss_pred CCcEEEcccCCCCCCCCCcCCC--CCCcEEEcccccccCCCCccccCCCCCCEEEccCCCCCCCCCCccccCCCCCCEEE
Q 002238 93 KLERLELQWNSISGPLPSLNGL--ASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFS 170 (948)
Q Consensus 93 ~L~~L~L~~N~l~~~~p~~~~l--~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~ 170 (948)
.++.|++++|.+.. ..+..+ ++++.|++++|.+++.++. +..+++|++|+|++|.++...+|..+..+++|++|+
T Consensus 48 ~~~~l~l~~~~~~~--~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~ 124 (336)
T 2ast_B 48 LWQTLDLTGKNLHP--DVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLS 124 (336)
T ss_dssp TSSEEECTTCBCCH--HHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEE
T ss_pred hheeeccccccCCH--HHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEe
Confidence 47899999998872 245566 8899999999999998877 557999999999999987523788899999999999
Q ss_pred ccCccccccCCCCCCCCCCCCCcEEEcccc-ccccc-CCCCcccccccceeccCCCCCCccCCCccccccCCCccEEEcc
Q 002238 171 ANSANITGQIPSFFGPDEFPGLTILHLAFN-QLIGG-LPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLH 248 (948)
Q Consensus 171 l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N-~l~~~-~p~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls 248 (948)
|++|.+++..+..++ .+++|++|+|++| .+++. ++. .+.++++|++|+|+
T Consensus 125 L~~~~l~~~~~~~l~--~~~~L~~L~L~~~~~l~~~~l~~--------------------------~~~~~~~L~~L~l~ 176 (336)
T 2ast_B 125 LEGLRLSDPIVNTLA--KNSNLVRLNLSGCSGFSEFALQT--------------------------LLSSCSRLDELNLS 176 (336)
T ss_dssp CTTCBCCHHHHHHHT--TCTTCSEEECTTCBSCCHHHHHH--------------------------HHHHCTTCCEEECC
T ss_pred CcCcccCHHHHHHHh--cCCCCCEEECCCCCCCCHHHHHH--------------------------HHhcCCCCCEEcCC
Confidence 999999988888887 7999999999999 56642 332 24578999999999
Q ss_pred CC-ccccc-CC-CCCCCC-CCcEEeccCC--ccc-cccchhhhCCCCCcEEEcccCc-ccccCCCCCCccccccccccCC
Q 002238 249 SN-AFSGP-LP-DFSGVK-QLESLSLRDN--FFT-GPVPDSLVKLESLKIVNMTNNL-LQGPVPEFDRSVSLDMAKGSNN 320 (948)
Q Consensus 249 ~N-~l~~~-~~-~~~~l~-~L~~L~L~~N--~l~-~~~p~~l~~l~~L~~L~Ls~N~-l~g~~p~~~~~~~l~~~~~~~~ 320 (948)
+| .+++. ++ .+..++ +|++|+|++| .++ +.+|..+.++++|+.|+|++|. +++..+.
T Consensus 177 ~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~--------------- 241 (336)
T 2ast_B 177 WCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQ--------------- 241 (336)
T ss_dssp CCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGG---------------
T ss_pred CCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHH---------------
Confidence 99 88863 33 366788 9999999999 455 5678888899999999999998 5543321
Q ss_pred CCCCCCCCCchhhhhhHHHHHhhCCcchhccccCCCCCCCCccceeecCCceEEEEccCCc-ccccCCccccCccccceE
Q 002238 321 FCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMN-LTGTISPEFASFKSLQRL 399 (948)
Q Consensus 321 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~-l~g~ip~~~~~l~~L~~L 399 (948)
.+..+++|+.|+|++|. +.......++++++|+.|
T Consensus 242 --------------------------------------------~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L 277 (336)
T 2ast_B 242 --------------------------------------------EFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTL 277 (336)
T ss_dssp --------------------------------------------GGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEE
T ss_pred --------------------------------------------HHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEE
Confidence 11234588999999995 333333368889999999
Q ss_pred eCccccccccCCcCCcCCC-CCcEEEccCCcccCCCCCCC
Q 002238 400 ILADNNLSGMIPEGLSVLG-ALKELDVSNNQLYGKIPSFK 438 (948)
Q Consensus 400 ~Ls~N~l~g~ip~~l~~l~-~L~~L~ls~N~l~g~ip~~~ 438 (948)
+|++| +. ...+..+. .|..|++++|++++..|...
T Consensus 278 ~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~~~~~~~~ 313 (336)
T 2ast_B 278 QVFGI-VP---DGTLQLLKEALPHLQINCSHFTTIARPTI 313 (336)
T ss_dssp ECTTS-SC---TTCHHHHHHHSTTSEESCCCSCCTTCSSC
T ss_pred eccCc-cC---HHHHHHHHhhCcceEEecccCccccCCcc
Confidence 99999 33 22344443 47777899999999888643
No 348
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.83 E-value=1.7e-20 Score=219.28 Aligned_cols=196 Identities=26% Similarity=0.363 Sum_probs=134.0
Q ss_pred CCcEEEcccccccCCCCccccCCCCCCEEEccCCCCCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEE
Q 002238 116 SLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTIL 195 (948)
Q Consensus 116 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L 195 (948)
+|+.|+|++|.|+++++.. +++|+.|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. +. . +|++|
T Consensus 60 ~L~~L~Ls~n~L~~lp~~l---~~~L~~L~Ls~N~l~--~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~--~--~L~~L 125 (571)
T 3cvr_A 60 QFSELQLNRLNLSSLPDNL---PPQITVLEITQNALI--SLP---ELPASLEYLDACDNRLST-LPE-LP--A--SLKHL 125 (571)
T ss_dssp TCSEEECCSSCCSCCCSCC---CTTCSEEECCSSCCS--CCC---CCCTTCCEEECCSSCCSC-CCC-CC--T--TCCEE
T ss_pred CccEEEeCCCCCCccCHhH---cCCCCEEECcCCCCc--ccc---cccCCCCEEEccCCCCCC-cch-hh--c--CCCEE
Confidence 6666777777666654433 256777777777776 455 346677777777777776 555 54 2 77888
Q ss_pred EcccccccccCCCCcccccccceeccCCCCCCccCCCccccccCCCccEEEccCCcccccCCCCCCCCCCcEEeccCCcc
Q 002238 196 HLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFF 275 (948)
Q Consensus 196 ~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l 275 (948)
+|++|+|++ +|. .+++|+.|+|++|++++. |. .+++|+.|+|++|+|
T Consensus 126 ~Ls~N~l~~-lp~-----------------------------~l~~L~~L~Ls~N~l~~l-p~--~l~~L~~L~Ls~N~L 172 (571)
T 3cvr_A 126 DVDNNQLTM-LPE-----------------------------LPALLEYINADNNQLTML-PE--LPTSLEVLSVRNNQL 172 (571)
T ss_dssp ECCSSCCSC-CCC-----------------------------CCTTCCEEECCSSCCSCC-CC--CCTTCCEEECCSSCC
T ss_pred ECCCCcCCC-CCC-----------------------------cCccccEEeCCCCccCcC-CC--cCCCcCEEECCCCCC
Confidence 888887775 443 146788888888888763 33 567888888888888
Q ss_pred ccccchhhhCCCCCcEEEcccCcccccCCCCCCccccccccccCCCCCCCCCCCchhhhhhHHHHHhhCCcchhccccCC
Q 002238 276 TGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKG 355 (948)
Q Consensus 276 ~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 355 (948)
++ +|. +. ++|+.|+|++|+|+ .+|.+.. +|
T Consensus 173 ~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~~~~--~L------------------------------------------- 202 (571)
T 3cvr_A 173 TF-LPE-LP--ESLEALDVSTNLLE-SLPAVPV--RN------------------------------------------- 202 (571)
T ss_dssp SC-CCC-CC--TTCCEEECCSSCCS-SCCCCC------------------------------------------------
T ss_pred CC-cch-hh--CCCCEEECcCCCCC-chhhHHH--hh-------------------------------------------
Confidence 85 666 55 78888888888887 3443211 00
Q ss_pred CCCCCCccceeecCCceEEEEccCCcccccCCccccCccccceEeCccccccccCCcCCcCCCC
Q 002238 356 NDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGA 419 (948)
Q Consensus 356 ~~~~~~~~~~~~~~~~L~~L~ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~ 419 (948)
......|+.|+|++|.|+ .+|..+.++++|+.|+|++|+|++.+|..+..+..
T Consensus 203 ----------~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 203 ----------HHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp ---------------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred ----------hcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 001124688888888888 57888888888888888888888888887776543
No 349
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.82 E-value=9e-20 Score=186.63 Aligned_cols=104 Identities=19% Similarity=0.235 Sum_probs=57.2
Q ss_pred cEEEcccCCCCCCCCCcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEccCCCCCCCCCCccccCCCCCCEEEccCc
Q 002238 95 ERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSA 174 (948)
Q Consensus 95 ~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n 174 (948)
+.++++++.++..+..+ .++|++|+|++|+++++++..|+.+++|++|+|++|+++. ..+..+..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRTSVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQS-LPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCSSCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCC-CCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCccCCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCc-cChhhcCCCCCcCEEECCCC
Confidence 45666666666554333 2466777777777776666666666666666666666663 11223444555555555555
Q ss_pred cccccCCCCCCCCCCCCCcEEEccccccc
Q 002238 175 NITGQIPSFFGPDEFPGLTILHLAFNQLI 203 (948)
Q Consensus 175 ~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~ 203 (948)
++++..+..|. .+++|++|+|++|+++
T Consensus 87 ~l~~~~~~~~~--~l~~L~~L~L~~N~l~ 113 (208)
T 2o6s_A 87 QLQSLPNGVFD--KLTQLKELALNTNQLQ 113 (208)
T ss_dssp CCCCCCTTTTT--TCTTCCEEECCSSCCC
T ss_pred cCCccCHhHhc--CccCCCEEEcCCCcCc
Confidence 55544443333 4444444444444444
No 350
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.81 E-value=3.2e-21 Score=233.98 Aligned_cols=225 Identities=16% Similarity=0.178 Sum_probs=112.1
Q ss_pred CChHHHHHHHHHHHhcCCCC---CCCCCC--CCCCCccceEEeCCCCEEEEEeCCCCCcCCCCccccCCCCCcEEEcccC
Q 002238 28 GDDGDAAVMLALKKSLNPPE---SLGWSD--TDPCKWNHVVCIEDKRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWN 102 (948)
Q Consensus 28 ~~~~d~~~l~~~k~~~~~~~---~~~w~~--~~~C~w~gv~c~~~~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N 102 (948)
....++++|.++..++.... ...|.. +.++.|.++.+.. .+++.|+|.++++.. ++. ..|+.++|+.|
T Consensus 129 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~~l~L~~n~~~~-~~~-----~~l~~l~Ls~~ 201 (727)
T 4b8c_D 129 LVDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVST-PLTPKIELFANGKDE-ANQ-----ALLQHKKLSQY 201 (727)
T ss_dssp ---CCCHHHHHHHHHHHHHHTTC---------------------------------------------------------
T ss_pred ccccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecC-CccceEEeeCCCCCc-chh-----hHhhcCccCcc
Confidence 44568889999987763322 225643 3457899888854 689999999998885 232 34566777777
Q ss_pred CCCCCCCCcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEccCCCCCCCCCCccccCCCCCCEEEccCccccccCCC
Q 002238 103 SISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPS 182 (948)
Q Consensus 103 ~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~ 182 (948)
.|.+ +++..|++. ++++.|..+++|+.|+|++|++. .+|..+.++++|++|+|++|.|+ .+|.
T Consensus 202 ~i~~-------------~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~--~l~~~~~~l~~L~~L~Ls~N~l~-~lp~ 264 (727)
T 4b8c_D 202 SIDE-------------DDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF--NISANIFKYDFLTRLYLNGNSLT-ELPA 264 (727)
T ss_dssp ----------------------------------CCCCCCEEECTTSCCS--CCCGGGGGCCSCSCCBCTTSCCS-CCCG
T ss_pred cccC-------------cccccccee-cChhhhccCCCCcEEECCCCCCC--CCChhhcCCCCCCEEEeeCCcCc-ccCh
Confidence 6654 344556665 56677888888888888888887 67777778888888888888887 6677
Q ss_pred CCCCCCCCCCcEEEcccccccccCCCCcccccccceeccCCCCCCccCCCccccccCCCccEEEccCCcccccCCCCCCC
Q 002238 183 FFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGV 262 (948)
Q Consensus 183 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l 262 (948)
.|+ .+++|++|+|++|+|+ .+|..| .++++|++|+|++|.|+..+..|..+
T Consensus 265 ~~~--~l~~L~~L~Ls~N~l~-~lp~~~--------------------------~~l~~L~~L~L~~N~l~~lp~~~~~l 315 (727)
T 4b8c_D 265 EIK--NLSNLRVLDLSHNRLT-SLPAEL--------------------------GSCFQLKYFYFFDNMVTTLPWEFGNL 315 (727)
T ss_dssp GGG--GGTTCCEEECTTSCCS-SCCSSG--------------------------GGGTTCSEEECCSSCCCCCCSSTTSC
T ss_pred hhh--CCCCCCEEeCcCCcCC-ccChhh--------------------------cCCCCCCEEECCCCCCCccChhhhcC
Confidence 676 7788888888888877 566654 36777777777777777544457777
Q ss_pred CCCcEEeccCCccccccchhhhCCCC-CcEEEcccCcccccCCC
Q 002238 263 KQLESLSLRDNFFTGPVPDSLVKLES-LKIVNMTNNLLQGPVPE 305 (948)
Q Consensus 263 ~~L~~L~L~~N~l~~~~p~~l~~l~~-L~~L~Ls~N~l~g~~p~ 305 (948)
++|+.|+|++|.|++.+|..+..+.. +..|+|++|.++|.+|.
T Consensus 316 ~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~ 359 (727)
T 4b8c_D 316 CNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH 359 (727)
T ss_dssp TTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_pred CCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc
Confidence 77777777777777777777655421 22356667777666554
No 351
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.80 E-value=3.5e-19 Score=184.96 Aligned_cols=154 Identities=19% Similarity=0.262 Sum_probs=139.0
Q ss_pred CCCCCCCCCccceEEeCC----------CCEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC-CcCCCCCCc
Q 002238 50 GWSDTDPCKWNHVVCIED----------KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLE 118 (948)
Q Consensus 50 ~w~~~~~C~w~gv~c~~~----------~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~ 118 (948)
.|.+...|+|++|.|... .+++.|+|++|++++..|..|.++++|++|+|++|+|+..++ .|.++++|+
T Consensus 12 ~~~~~~~Cs~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~ 91 (229)
T 3e6j_A 12 ACPSQCSCSGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLT 91 (229)
T ss_dssp CCCTTCEEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred cCCCCCEEeCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcC
Confidence 345677899999999642 478999999999999889999999999999999999988776 578999999
Q ss_pred EEEcccccccCCCCccccCCCCCCEEEccCCCCCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcc
Q 002238 119 VVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLA 198 (948)
Q Consensus 119 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls 198 (948)
+|+|++|+|+++++..|..+++|+.|+|++|+|+ .+|..+..+++|++|+|++|+|++..+..|. .+++|+.|+|+
T Consensus 92 ~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~--~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~l~ 167 (229)
T 3e6j_A 92 VLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT--ELPRGIERLTHLTHLALDQNQLKSIPHGAFD--RLSSLTHAYLF 167 (229)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC--SCCTTGGGCTTCSEEECCSSCCCCCCTTTTT--TCTTCCEEECT
T ss_pred EEECCCCcCCccChhHhCcchhhCeEeccCCccc--ccCcccccCCCCCEEECCCCcCCccCHHHHh--CCCCCCEEEee
Confidence 9999999999999999999999999999999999 7899999999999999999999988877786 89999999999
Q ss_pred cccccccCC
Q 002238 199 FNQLIGGLP 207 (948)
Q Consensus 199 ~N~l~~~~p 207 (948)
+|.+.+..+
T Consensus 168 ~N~~~c~c~ 176 (229)
T 3e6j_A 168 GNPWDCECR 176 (229)
T ss_dssp TSCBCTTBG
T ss_pred CCCccCCcc
Confidence 999986544
No 352
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.79 E-value=4.9e-19 Score=191.00 Aligned_cols=173 Identities=20% Similarity=0.339 Sum_probs=140.0
Q ss_pred ccCCCCCcEEEcccCCCCCCCCCcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEccCCCCCCCCCCccccCCCCCC
Q 002238 88 LQNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQ 167 (948)
Q Consensus 88 l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~ 167 (948)
+..+++|++|++++|.+... +.+..+++|++|+|++|+++++++ +..+++|+.|+|++|+++. +| .+..+++|+
T Consensus 42 ~~~l~~L~~L~l~~~~i~~~-~~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~--~~-~l~~l~~L~ 115 (291)
T 1h6t_A 42 QNELNSIDQIIANNSDIKSV-QGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD--LS-SLKDLKKLK 115 (291)
T ss_dssp HHHHHTCCEEECTTSCCCCC-TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC--GG-GGTTCTTCC
T ss_pred hhhcCcccEEEccCCCcccC-hhHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC--Ch-hhccCCCCC
Confidence 35677888888888888765 567788888888888888888776 8888888888888888874 33 488888888
Q ss_pred EEEccCccccccCCCCCCCCCCCCCcEEEcccccccccCCCCcccccccceeccCCCCCCccCCCccccccCCCccEEEc
Q 002238 168 NFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWL 247 (948)
Q Consensus 168 ~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~L 247 (948)
+|++++|++++. ..+. .+++|++|+|++|++++. .. +.++++|+.|+|
T Consensus 116 ~L~L~~n~i~~~--~~l~--~l~~L~~L~l~~n~l~~~--~~--------------------------l~~l~~L~~L~L 163 (291)
T 1h6t_A 116 SLSLEHNGISDI--NGLV--HLPQLESLYLGNNKITDI--TV--------------------------LSRLTKLDTLSL 163 (291)
T ss_dssp EEECTTSCCCCC--GGGG--GCTTCCEEECCSSCCCCC--GG--------------------------GGGCTTCSEEEC
T ss_pred EEECCCCcCCCC--hhhc--CCCCCCEEEccCCcCCcc--hh--------------------------hccCCCCCEEEc
Confidence 888888888864 3454 788899999999988753 22 457889999999
Q ss_pred cCCcccccCCCCCCCCCCcEEeccCCccccccchhhhCCCCCcEEEcccCcccc
Q 002238 248 HSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQG 301 (948)
Q Consensus 248 s~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g 301 (948)
++|++++..+ +..+++|+.|+|++|.|++ +|. +..+++|+.|+|++|+++.
T Consensus 164 ~~N~l~~~~~-l~~l~~L~~L~L~~N~i~~-l~~-l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 164 EDNQISDIVP-LAGLTKLQNLYLSKNHISD-LRA-LAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CSSCCCCCGG-GTTCTTCCEEECCSSCCCB-CGG-GTTCTTCSEEEEEEEEEEC
T ss_pred cCCccccchh-hcCCCccCEEECCCCcCCC-Chh-hccCCCCCEEECcCCcccC
Confidence 9999988666 8888999999999999984 554 8899999999999999875
No 353
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.78 E-value=8e-19 Score=207.47 Aligned_cols=188 Identities=19% Similarity=0.323 Sum_probs=153.7
Q ss_pred EEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCCCcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEccCCCCC
Q 002238 73 IQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFS 152 (948)
Q Consensus 73 l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 152 (948)
+.+..+.+...++ +..|.+|+.|+|++|.|..+ +.+..+++|+.|+|++|+|+++++ |..+++|+.|+|++|+|+
T Consensus 26 l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l-~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~ 100 (605)
T 1m9s_A 26 DNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-QGIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIK 100 (605)
T ss_dssp HHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCC-TTGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCC
T ss_pred HhccCCCcccccc--hhcCCCCCEEECcCCCCCCC-hHHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCC
Confidence 3444455554332 56678899999999998865 578889999999999999998877 889999999999999998
Q ss_pred CCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccccCCCCcccccccceeccCCCCCCccCCC
Q 002238 153 SWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGG 232 (948)
Q Consensus 153 ~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~~~~~~ 232 (948)
. +| .+..+++|+.|+|++|+|++. + .+. .+++|+.|+|++|++++. ..
T Consensus 101 ~--l~-~l~~l~~L~~L~Ls~N~l~~l-~-~l~--~l~~L~~L~Ls~N~l~~l--~~----------------------- 148 (605)
T 1m9s_A 101 D--LS-SLKDLKKLKSLSLEHNGISDI-N-GLV--HLPQLESLYLGNNKITDI--TV----------------------- 148 (605)
T ss_dssp C--CT-TSTTCTTCCEEECTTSCCCCC-G-GGG--GCTTCSEEECCSSCCCCC--GG-----------------------
T ss_pred C--Ch-hhccCCCCCEEEecCCCCCCC-c-ccc--CCCccCEEECCCCccCCc--hh-----------------------
Confidence 4 34 788899999999999999864 3 354 789999999999998854 22
Q ss_pred ccccccCCCccEEEccCCcccccCCCCCCCCCCcEEeccCCccccccchhhhCCCCCcEEEcccCcccccC
Q 002238 233 IDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPV 303 (948)
Q Consensus 233 ~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~ 303 (948)
|..+++|+.|+|++|++++.++ +..+++|+.|+|++|+|++ +| .+..+++|+.|+|++|++++.+
T Consensus 149 ---l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~L~~N~l~~~p 213 (605)
T 1m9s_A 149 ---LSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLNKP 213 (605)
T ss_dssp ---GGSCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEECCSEEEECCC
T ss_pred ---hcccCCCCEEECcCCcCCCchh-hccCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEccCCcCcCCc
Confidence 4578999999999999998777 8889999999999999995 44 5899999999999999998643
No 354
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.77 E-value=4.5e-18 Score=175.32 Aligned_cols=152 Identities=22% Similarity=0.299 Sum_probs=134.1
Q ss_pred EEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC--CcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEccCC
Q 002238 72 RIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP--SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNN 149 (948)
Q Consensus 72 ~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p--~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 149 (948)
.+++++++++ .+|..+. ..+++|+|++|+|++.++ .|.++++|++|+|++|+|+++++..|.++++|++|+|++|
T Consensus 15 ~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 6788888888 5777665 457899999999999865 4889999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccccCCCCcccccccceeccCCCCCCcc
Q 002238 150 PFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKL 229 (948)
Q Consensus 150 ~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~~~ 229 (948)
++++ ..+..|..+++|++|+|++|+|++..|..|. .+++|++|+|++|++++..|..|.
T Consensus 92 ~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~------------------ 150 (220)
T 2v70_A 92 RLEN-VQHKMFKGLESLKTLMLRSNRITCVGNDSFI--GLSSVRLLSLYDNQITTVAPGAFD------------------ 150 (220)
T ss_dssp CCCC-CCGGGGTTCSSCCEEECTTSCCCCBCTTSST--TCTTCSEEECTTSCCCCBCTTTTT------------------
T ss_pred ccCc-cCHhHhcCCcCCCEEECCCCcCCeECHhHcC--CCccCCEEECCCCcCCEECHHHhc------------------
Confidence 9996 4466799999999999999999999999997 899999999999999988787753
Q ss_pred CCCccccccCCCccEEEccCCccccc
Q 002238 230 GGGIDVIQNMTSLKEIWLHSNAFSGP 255 (948)
Q Consensus 230 ~~~~~~l~~l~~L~~L~Ls~N~l~~~ 255 (948)
.+++|+.|+|++|.+...
T Consensus 151 --------~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 151 --------TLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp --------TCTTCCEEECCSCCEECS
T ss_pred --------CCCCCCEEEecCcCCcCC
Confidence 678888888888888753
No 355
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.76 E-value=1e-20 Score=226.52 Aligned_cols=325 Identities=15% Similarity=0.070 Sum_probs=226.6
Q ss_pred CCEEEEEeCCCCCcCC----CCccccCCCCCcEEEcccCCCCCCC----C-CcCCCCCCcEEEcccccccCCCCccccCC
Q 002238 68 KRITRIQIGHQNLQGT----LPSNLQNLTKLERLELQWNSISGPL----P-SLNGLASLEVVMLSNNQFTSVPSDFFTGL 138 (948)
Q Consensus 68 ~~v~~l~l~~~~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~~----p-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 138 (948)
.++++|+|++|.+++. ++..+.++++|++|+|++|.+++.. + .+.++++|++|+|++|.+.+++ ..+.++
T Consensus 164 ~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~l~-~~~~~~ 242 (592)
T 3ogk_B 164 RKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELV-GFFKAA 242 (592)
T ss_dssp TTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGGGH-HHHHHC
T ss_pred CCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHHHH-HHHhhh
Confidence 5899999999998766 4445667899999999999998432 2 3567899999999999999855 778999
Q ss_pred CCCCEEEccCCCCC--CCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccccCCCC-ccc-cc
Q 002238 139 SSLQSIEIDNNPFS--SWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPAS-FSG-SQ 214 (948)
Q Consensus 139 ~~L~~L~Ls~N~l~--~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~-~~ 214 (948)
++|+.|+++.+... ....+..+..+++|+.|+++++. .+.+|..+. .+++|++|+|++|.+++..... +.. .+
T Consensus 243 ~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~-~~~l~~~~~--~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~ 319 (592)
T 3ogk_B 243 ANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMG-PNEMPILFP--FAAQIRKLDLLYALLETEDHCTLIQKCPN 319 (592)
T ss_dssp TTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCC-TTTGGGGGG--GGGGCCEEEETTCCCCHHHHHHHHTTCTT
T ss_pred hHHHhhcccccccccchHHHHHHhhccccccccCccccc-hhHHHHHHh--hcCCCcEEecCCCcCCHHHHHHHHHhCcC
Confidence 99999999864332 11445677888899999998853 345666665 7889999999999876543322 111 46
Q ss_pred ccceeccCCCCCCcc-CCCccccccCCCccEEEcc-----------CCccccc-CCC-CCCCCCCcEEeccCCccccccc
Q 002238 215 IQSLWVNGQNGNAKL-GGGIDVIQNMTSLKEIWLH-----------SNAFSGP-LPD-FSGVKQLESLSLRDNFFTGPVP 280 (948)
Q Consensus 215 l~~l~~~~~~~~~~~-~~~~~~l~~l~~L~~L~Ls-----------~N~l~~~-~~~-~~~l~~L~~L~L~~N~l~~~~p 280 (948)
|+.|++.+ ... .+....+..+++|++|+|+ .|.+++. +.. ..++++|+.|+++.|++++..+
T Consensus 320 L~~L~L~~----~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~ 395 (592)
T 3ogk_B 320 LEVLETRN----VIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESL 395 (592)
T ss_dssp CCEEEEEG----GGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHH
T ss_pred CCEEeccC----ccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHH
Confidence 77777652 222 2223344678999999999 3666642 222 3457899999999999998888
Q ss_pred hhhhC-CCCCcEEEcc----cCcccccCCC------CCCccccccccccCCCCCCCCCCCchhhhhhHHHHHhhCCcchh
Q 002238 281 DSLVK-LESLKIVNMT----NNLLQGPVPE------FDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRF 349 (948)
Q Consensus 281 ~~l~~-l~~L~~L~Ls----~N~l~g~~p~------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 349 (948)
..+.. +++|+.|+|+ .|.+++.+.+ +.++.+|+.++...+.- .+. . ..+.
T Consensus 396 ~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~-~l~---~---~~~~------------ 456 (592)
T 3ogk_B 396 ESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQG-GLT---D---LGLS------------ 456 (592)
T ss_dssp HHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGG-GCC---H---HHHH------------
T ss_pred HHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCC-Ccc---H---HHHH------------
Confidence 88876 9999999996 6777753211 22233333333221000 000 0 0000
Q ss_pred ccccCCCCCCCCccceeecCCceEEEEccCCcccc-cCCccccCccccceEeCcccccccc-CCcCCcCCCCCcEEEccC
Q 002238 350 AENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTG-TISPEFASFKSLQRLILADNNLSGM-IPEGLSVLGALKELDVSN 427 (948)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~g-~ip~~~~~l~~L~~L~Ls~N~l~g~-ip~~l~~l~~L~~L~ls~ 427 (948)
.....+++|+.|+|++|++++ .++..+..+++|+.|+|++|.+++. ++..+..+++|++|+|++
T Consensus 457 --------------~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~ 522 (592)
T 3ogk_B 457 --------------YIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQG 522 (592)
T ss_dssp --------------HHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEES
T ss_pred --------------HHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcC
Confidence 011125689999999999987 4555668899999999999998755 444456789999999999
Q ss_pred CcccCC
Q 002238 428 NQLYGK 433 (948)
Q Consensus 428 N~l~g~ 433 (948)
|++++.
T Consensus 523 n~it~~ 528 (592)
T 3ogk_B 523 YRASMT 528 (592)
T ss_dssp CBCCTT
T ss_pred CcCCHH
Confidence 998764
No 356
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.76 E-value=2.4e-18 Score=191.83 Aligned_cols=173 Identities=20% Similarity=0.227 Sum_probs=118.3
Q ss_pred EEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC-CcC-CCCCCcEEEcccccccCCCCccccCCCCCCEEEccCC
Q 002238 72 RIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLN-GLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNN 149 (948)
Q Consensus 72 ~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 149 (948)
.+++++++|+ .+|..+. ..|+.|+|++|+|++..+ .|. ++++|++|+|++|+|+++++..|.++++|++|+|++|
T Consensus 22 ~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 22 ILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp EEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 5677788887 5676654 357888888888888766 455 7888888888888888888877888888888888888
Q ss_pred CCCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccccCCCCcccccccceeccCCCCCCcc
Q 002238 150 PFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKL 229 (948)
Q Consensus 150 ~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~~~ 229 (948)
+|+. ..+..|.++++|+.|+|++|+|++..+..|. .+++|++|+|++|+|+
T Consensus 99 ~l~~-~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~--~l~~L~~L~L~~N~l~-------------------------- 149 (361)
T 2xot_A 99 HLHT-LDEFLFSDLQALEVLLLYNNHIVVVDRNAFE--DMAQLQKLYLSQNQIS-------------------------- 149 (361)
T ss_dssp CCCE-ECTTTTTTCTTCCEEECCSSCCCEECTTTTT--TCTTCCEEECCSSCCC--------------------------
T ss_pred cCCc-CCHHHhCCCcCCCEEECCCCcccEECHHHhC--CcccCCEEECCCCcCC--------------------------
Confidence 7774 2233455566666666666666655555554 5555555555555555
Q ss_pred CCCccccccCCCccEEEccCCcccccCCC-C---CCCCCCcEEeccCCccccccchhhhCCCC--CcEEEcccCccc
Q 002238 230 GGGIDVIQNMTSLKEIWLHSNAFSGPLPD-F---SGVKQLESLSLRDNFFTGPVPDSLVKLES--LKIVNMTNNLLQ 300 (948)
Q Consensus 230 ~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~-~---~~l~~L~~L~L~~N~l~~~~p~~l~~l~~--L~~L~Ls~N~l~ 300 (948)
+.++. | ..+++|+.|+|++|+|++..+..+..++. |+.|+|++|++.
T Consensus 150 ------------------------~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 150 ------------------------RFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp ------------------------SCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred ------------------------eeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 32222 1 34677778888888887555567777776 478899999886
No 357
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.76 E-value=1.2e-18 Score=184.38 Aligned_cols=138 Identities=20% Similarity=0.186 Sum_probs=106.0
Q ss_pred CcccceecccCceEEEEEEE-cCCcE--EEEEEeecCcCCh----------------------hhHHHHHHHHHHHHhcC
Q 002238 595 FSEENILGRGGFGTVYKGEL-HDGTK--IAVKRMEAGVISG----------------------KGLTEFKSEIAVLTKVR 649 (948)
Q Consensus 595 ~~~~~~lg~G~fg~Vy~~~~-~~g~~--vavK~~~~~~~~~----------------------~~~~~~~~E~~~l~~l~ 649 (948)
|++.+.||+|+||.||+|.. .+|+. ||||+++...... .....+.+|++++.+++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 67789999999999999987 67999 9999875432110 11236889999999998
Q ss_pred CCce--eeEEeEEEeCCceEEEEEecCC-C----ChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHH-hccCCCee
Q 002238 650 HRHL--VALLGHCLDGNEKLLVFEYMPQ-G----TLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLH-GLAHQSFI 721 (948)
Q Consensus 650 H~ni--v~l~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH-~~~~~~iv 721 (948)
|+++ ..++++ +..++||||+.+ | +|.+.... .++..+..++.|++.||+||| + .+|+
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~--------~~~~~~~~i~~qi~~~l~~lH~~---~giv 193 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE--------LKELDVEGIFNDVVENVKRLYQE---AELV 193 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG--------GGGSCHHHHHHHHHHHHHHHHHT---SCEE
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc--------cChHHHHHHHHHHHHHHHHHHHH---CCEE
Confidence 8754 344432 356899999942 4 56554321 123456789999999999999 6 8999
Q ss_pred ecCCCCccEEEcCCCCeEEeecCCceec
Q 002238 722 HRDLKPSNILLGDDMRAKVADFGLVRLA 749 (948)
Q Consensus 722 HrDik~~Nill~~~~~~kl~DfGla~~~ 749 (948)
||||||+|||++. .++|+|||+|...
T Consensus 194 HrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 194 HADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred eCCCCHHHEEEcC--cEEEEECcccccC
Confidence 9999999999998 9999999999754
No 358
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.75 E-value=6.1e-21 Score=228.44 Aligned_cols=342 Identities=15% Similarity=0.100 Sum_probs=237.3
Q ss_pred CEEEEEeCCCC-CcC-CCCccccCCCCCcEEEcccCCCCCC----CC-CcCCCCCCcEEEcccccccCCC----CccccC
Q 002238 69 RITRIQIGHQN-LQG-TLPSNLQNLTKLERLELQWNSISGP----LP-SLNGLASLEVVMLSNNQFTSVP----SDFFTG 137 (948)
Q Consensus 69 ~v~~l~l~~~~-l~~-~~p~~l~~l~~L~~L~L~~N~l~~~----~p-~~~~l~~L~~L~L~~N~l~~~~----~~~~~~ 137 (948)
+++.|+|++|. ++. .++....++++|++|+|++|.+++. ++ .+.++++|++|+|++|.++++. +..+.+
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~ 218 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh
Confidence 49999999886 221 1223345789999999999998765 22 2456899999999999998544 344678
Q ss_pred CCCCCEEEccCCCCCCCCCCccccCCCCCCEEEccCcccc---ccCCCCCCCCCCCCCcEEEcccccccccCCCCccc-c
Q 002238 138 LSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANIT---GQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSG-S 213 (948)
Q Consensus 138 l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~---~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~ 213 (948)
+++|+.|+|++|.+. .+|..+.++++|+.|+++.+... +..+..+. .+++|+.|+++++.. +.+|..+.. .
T Consensus 219 ~~~L~~L~L~~~~~~--~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~--~~~~L~~L~l~~~~~-~~l~~~~~~~~ 293 (592)
T 3ogk_B 219 CRSLVSVKVGDFEIL--ELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLV--FPRKLCRLGLSYMGP-NEMPILFPFAA 293 (592)
T ss_dssp CTTCCEEECSSCBGG--GGHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCC--CCTTCCEEEETTCCT-TTGGGGGGGGG
T ss_pred CCCCcEEeccCccHH--HHHHHHhhhhHHHhhcccccccccchHHHHHHhh--ccccccccCccccch-hHHHHHHhhcC
Confidence 999999999999998 57899999999999999864433 23334444 788999999998643 355655543 5
Q ss_pred cccceeccCCCCCCccCCC-ccccccCCCccEEEccCCcccc-cCCC-CCCCCCCcEEecc-----------CCccccc-
Q 002238 214 QIQSLWVNGQNGNAKLGGG-IDVIQNMTSLKEIWLHSNAFSG-PLPD-FSGVKQLESLSLR-----------DNFFTGP- 278 (948)
Q Consensus 214 ~l~~l~~~~~~~~~~~~~~-~~~l~~l~~L~~L~Ls~N~l~~-~~~~-~~~l~~L~~L~L~-----------~N~l~~~- 278 (948)
+|+.|++.++. ..... ...+.++++|+.|+|+ |.+.. .++. +..+++|+.|+|+ .|.+++.
T Consensus 294 ~L~~L~Ls~~~---l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~ 369 (592)
T 3ogk_B 294 QIRKLDLLYAL---LETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRG 369 (592)
T ss_dssp GCCEEEETTCC---CCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHH
T ss_pred CCcEEecCCCc---CCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHH
Confidence 68888887654 22222 2446889999999999 54443 3333 3457899999999 4677754
Q ss_pred cchhhhCCCCCcEEEcccCcccccCCC-----CCCcccccccccc-CCCCCCCCCCCchhhhhhHHHHHhhCCcchhccc
Q 002238 279 VPDSLVKLESLKIVNMTNNLLQGPVPE-----FDRSVSLDMAKGS-NNFCLPSPGACDPRLNALLSVVKLMGYPQRFAEN 352 (948)
Q Consensus 279 ~p~~l~~l~~L~~L~Ls~N~l~g~~p~-----~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 352 (948)
++.....+++|+.|+++.|++++..+. +.++..|++.... .+.....|.. ..+.
T Consensus 370 ~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~--~~~~------------------ 429 (592)
T 3ogk_B 370 LIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLD--NGVR------------------ 429 (592)
T ss_dssp HHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCH--HHHH------------------
T ss_pred HHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHH--HHHH------------------
Confidence 334456699999999999999864332 2233333332211 2222211100 0000
Q ss_pred cCCCCCCCCccceeecCCceEEEEccCCc--ccccCCccccC-ccccceEeCccccccc-cCCcCCcCCCCCcEEEccCC
Q 002238 353 WKGNDPCSDWIGVTCTKGNITVINFQKMN--LTGTISPEFAS-FKSLQRLILADNNLSG-MIPEGLSVLGALKELDVSNN 428 (948)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~L~~L~ls~n~--l~g~ip~~~~~-l~~L~~L~Ls~N~l~g-~ip~~l~~l~~L~~L~ls~N 428 (948)
..+..+++|+.|+|++|. +++..+..++. +++|+.|+|++|++++ .++..+..+++|++|+|++|
T Consensus 430 -----------~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n 498 (592)
T 3ogk_B 430 -----------SLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGC 498 (592)
T ss_dssp -----------HHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESC
T ss_pred -----------HHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCC
Confidence 112346789999998644 77776666655 8999999999999987 45666688999999999999
Q ss_pred cccCC-CC----CCCcccccccCCCCC
Q 002238 429 QLYGK-IP----SFKSNAIVNTDGNPD 450 (948)
Q Consensus 429 ~l~g~-ip----~~~~~~~~~~~gnp~ 450 (948)
++++. ++ .+.....+.+++|..
T Consensus 499 ~l~~~~~~~~~~~l~~L~~L~ls~n~i 525 (592)
T 3ogk_B 499 CFSERAIAAAVTKLPSLRYLWVQGYRA 525 (592)
T ss_dssp CCBHHHHHHHHHHCSSCCEEEEESCBC
T ss_pred CCcHHHHHHHHHhcCccCeeECcCCcC
Confidence 98753 22 245677888888873
No 359
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.75 E-value=1.2e-17 Score=172.16 Aligned_cols=150 Identities=25% Similarity=0.363 Sum_probs=130.6
Q ss_pred EEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEccCCC
Q 002238 72 RIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNP 150 (948)
Q Consensus 72 ~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 150 (948)
.+++++++++ .+|..+. ++|++|+|++|+|+++.+ .|.++++|++|+|++|+|+++.|..|.++++|++|+|++|+
T Consensus 15 ~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 15 IVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 4556677777 6777665 789999999999999877 79999999999999999999999999999999999999999
Q ss_pred CCCCCCCc-cccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccccCCCCcccccccceeccCCCCCCcc
Q 002238 151 FSSWEIPQ-SLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKL 229 (948)
Q Consensus 151 l~~~~~p~-~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~~~ 229 (948)
|+. +|. .|..+++|++|+|++|+|++..|..|. .+++|++|+|++|++++..+..|
T Consensus 92 l~~--l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~------------------- 148 (220)
T 2v9t_B 92 ITE--LPKSLFEGLFSLQLLLLNANKINCLRVDAFQ--DLHNLNLLSLYDNKLQTIAKGTF------------------- 148 (220)
T ss_dssp CCC--CCTTTTTTCTTCCEEECCSSCCCCCCTTTTT--TCTTCCEEECCSSCCSCCCTTTT-------------------
T ss_pred CCc--cCHhHccCCCCCCEEECCCCCCCEeCHHHcC--CCCCCCEEECCCCcCCEECHHHH-------------------
Confidence 994 554 578899999999999999999999987 89999999999999997666554
Q ss_pred CCCccccccCCCccEEEccCCcccc
Q 002238 230 GGGIDVIQNMTSLKEIWLHSNAFSG 254 (948)
Q Consensus 230 ~~~~~~l~~l~~L~~L~Ls~N~l~~ 254 (948)
..+++|+.|+|++|.+.-
T Consensus 149 -------~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 149 -------SPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp -------TTCTTCCEEECCSSCEEC
T ss_pred -------hCCCCCCEEEeCCCCcCC
Confidence 367888999999988863
No 360
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.75 E-value=2.4e-18 Score=203.36 Aligned_cols=170 Identities=23% Similarity=0.374 Sum_probs=151.1
Q ss_pred CCEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCCCcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEcc
Q 002238 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEID 147 (948)
Q Consensus 68 ~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 147 (948)
.+++.|++++|++.. ++ .+..+++|+.|+|++|.|++.++ +..+++|+.|+|++|.|++++ .|..+++|+.|+|+
T Consensus 43 ~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~l~~l~--~l~~l~~L~~L~Ls 117 (605)
T 1m9s_A 43 NSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP-LTNLKNLGWLFLDENKIKDLS--SLKDLKKLKSLSLE 117 (605)
T ss_dssp TTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG-GGGCTTCCEEECCSSCCCCCT--TSTTCTTCCEEECT
T ss_pred CCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh-hccCCCCCEEECcCCCCCCCh--hhccCCCCCEEEec
Confidence 578899999999984 44 68999999999999999999776 999999999999999999865 59999999999999
Q ss_pred CCCCCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccccCCCCcccccccceeccCCCCCC
Q 002238 148 NNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNA 227 (948)
Q Consensus 148 ~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~ 227 (948)
+|+++. + ..+..+++|+.|+|++|+|++. ..+. .+++|+.|+|++|+|++..| +
T Consensus 118 ~N~l~~--l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~--~l~~L~~L~Ls~N~l~~~~~--l----------------- 171 (605)
T 1m9s_A 118 HNGISD--I-NGLVHLPQLESLYLGNNKITDI--TVLS--RLTKLDTLSLEDNQISDIVP--L----------------- 171 (605)
T ss_dssp TSCCCC--C-GGGGGCTTCSEEECCSSCCCCC--GGGG--SCTTCSEEECCSSCCCCCGG--G-----------------
T ss_pred CCCCCC--C-ccccCCCccCEEECCCCccCCc--hhhc--ccCCCCEEECcCCcCCCchh--h-----------------
Confidence 999995 3 5689999999999999999976 4555 89999999999999987655 3
Q ss_pred ccCCCccccccCCCccEEEccCCcccccCCCCCCCCCCcEEeccCCccccc
Q 002238 228 KLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGP 278 (948)
Q Consensus 228 ~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~ 278 (948)
..+++|+.|+|++|+|++. +.+..+++|+.|+|++|++.+.
T Consensus 172 ---------~~l~~L~~L~Ls~N~i~~l-~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 172 ---------AGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp ---------TTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEECCSEEEECC
T ss_pred ---------ccCCCCCEEECcCCCCCCC-hHHccCCCCCEEEccCCcCcCC
Confidence 3789999999999999975 6788999999999999999854
No 361
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.74 E-value=4.3e-18 Score=183.61 Aligned_cols=169 Identities=24% Similarity=0.380 Sum_probs=149.7
Q ss_pred CCEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCCCcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEcc
Q 002238 68 KRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEID 147 (948)
Q Consensus 68 ~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 147 (948)
.+++.|++++|++... + .+..+++|++|+|++|++++..+ +.++++|++|+|++|.+++++. +..+++|++|+|+
T Consensus 46 ~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~ 120 (291)
T 1h6t_A 46 NSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP-LANLKNLGWLFLDENKVKDLSS--LKDLKKLKSLSLE 120 (291)
T ss_dssp HTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCGGG--GTTCTTCCEEECT
T ss_pred CcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc-cccCCCCCEEECCCCcCCCChh--hccCCCCCEEECC
Confidence 4789999999999854 4 58899999999999999999777 9999999999999999998643 9999999999999
Q ss_pred CCCCCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccccCCCCcccccccceeccCCCCCC
Q 002238 148 NNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNA 227 (948)
Q Consensus 148 ~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~ 227 (948)
+|+++. + ..+..+++|+.|++++|++++. ..+. .+++|++|+|++|++++..| +
T Consensus 121 ~n~i~~--~-~~l~~l~~L~~L~l~~n~l~~~--~~l~--~l~~L~~L~L~~N~l~~~~~--l----------------- 174 (291)
T 1h6t_A 121 HNGISD--I-NGLVHLPQLESLYLGNNKITDI--TVLS--RLTKLDTLSLEDNQISDIVP--L----------------- 174 (291)
T ss_dssp TSCCCC--C-GGGGGCTTCCEEECCSSCCCCC--GGGG--GCTTCSEEECCSSCCCCCGG--G-----------------
T ss_pred CCcCCC--C-hhhcCCCCCCEEEccCCcCCcc--hhhc--cCCCCCEEEccCCccccchh--h-----------------
Confidence 999995 3 5789999999999999999976 4555 89999999999999986544 3
Q ss_pred ccCCCccccccCCCccEEEccCCcccccCCCCCCCCCCcEEeccCCcccc
Q 002238 228 KLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTG 277 (948)
Q Consensus 228 ~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~ 277 (948)
..+++|+.|+|++|++++. +.+..+++|+.|+|++|+++.
T Consensus 175 ---------~~l~~L~~L~L~~N~i~~l-~~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 175 ---------AGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp ---------TTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEEEEEEEEEC
T ss_pred ---------cCCCccCEEECCCCcCCCC-hhhccCCCCCEEECcCCcccC
Confidence 3789999999999999974 568899999999999999984
No 362
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.74 E-value=1.4e-17 Score=171.58 Aligned_cols=152 Identities=24% Similarity=0.307 Sum_probs=88.9
Q ss_pred cEEEcccCCCCCCCCCcCCCCCCcEEEcccccccCCCC-ccccCCCCCCEEEccCCCCCCCCCCccccCCCCCCEEEccC
Q 002238 95 ERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPS-DFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANS 173 (948)
Q Consensus 95 ~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~ 173 (948)
+.|++++|.++.+++.+. ..+++|+|++|+|+++++ ..|..+++|+.|+|++|+|+
T Consensus 14 ~~l~~s~n~l~~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~--------------------- 70 (220)
T 2v70_A 14 TTVDCSNQKLNKIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKIT--------------------- 70 (220)
T ss_dssp TEEECCSSCCSSCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCC---------------------
T ss_pred CEeEeCCCCcccCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCC---------------------
Confidence 366666666665443333 234566666666666533 34555556666665555555
Q ss_pred ccccccCCCCCCCCCCCCCcEEEcccccccccCCCCcccccccceeccCCCCCCccCCCccccccCCCccEEEccCCccc
Q 002238 174 ANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFS 253 (948)
Q Consensus 174 n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~ 253 (948)
+..+..|. .+++|++|+|++|++++..+..| .++++|++|+|++|+++
T Consensus 71 ----~i~~~~~~--~l~~L~~L~Ls~N~l~~~~~~~~--------------------------~~l~~L~~L~Ls~N~l~ 118 (220)
T 2v70_A 71 ----DIEEGAFE--GASGVNEILLTSNRLENVQHKMF--------------------------KGLESLKTLMLRSNRIT 118 (220)
T ss_dssp ----EECTTTTT--TCTTCCEEECCSSCCCCCCGGGG--------------------------TTCSSCCEEECTTSCCC
T ss_pred ----EECHHHhC--CCCCCCEEECCCCccCccCHhHh--------------------------cCCcCCCEEECCCCcCC
Confidence 34444443 45555555555555554333332 24556666666666666
Q ss_pred ccCC-CCCCCCCCcEEeccCCccccccchhhhCCCCCcEEEcccCcccc
Q 002238 254 GPLP-DFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQG 301 (948)
Q Consensus 254 ~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g 301 (948)
+.++ .|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|++.+
T Consensus 119 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 119 CVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNC 167 (220)
T ss_dssp CBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEEC
T ss_pred eECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcC
Confidence 5544 35566677777777777776667777777777777777777764
No 363
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.74 E-value=1.9e-17 Score=170.55 Aligned_cols=109 Identities=18% Similarity=0.262 Sum_probs=70.5
Q ss_pred cEEEcccCCCCCCCCCcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEccCCCCCCCCCCccccCCCCCCEEEccCc
Q 002238 95 ERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSA 174 (948)
Q Consensus 95 ~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n 174 (948)
+.+++++|.++.++..+. ++|++|+|++|+|+++++..|..+++|+.|+|++|+|+. ..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~-~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLTEIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISE-LAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCSSCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCE-ECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcCcCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCC-cCHHHhhCCcCCCEEECCCC
Confidence 467788888877655444 577888888888888777777777777777777777774 33555666666666666666
Q ss_pred cccccCCCCCCCCCCCCCcEEEcccccccccCCC
Q 002238 175 NITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPA 208 (948)
Q Consensus 175 ~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 208 (948)
+|+...+..|. .+++|++|+|++|++++..|.
T Consensus 91 ~l~~l~~~~f~--~l~~L~~L~L~~N~l~~~~~~ 122 (220)
T 2v9t_B 91 KITELPKSLFE--GLFSLQLLLLNANKINCLRVD 122 (220)
T ss_dssp CCCCCCTTTTT--TCTTCCEEECCSSCCCCCCTT
T ss_pred cCCccCHhHcc--CCCCCCEEECCCCCCCEeCHH
Confidence 66544444443 455555555555555544443
No 364
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.74 E-value=5.6e-18 Score=188.93 Aligned_cols=147 Identities=20% Similarity=0.283 Sum_probs=127.2
Q ss_pred CCccceEEeCC----------CCEEEEEeCCCCCcCCCCcccc-CCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEccc
Q 002238 57 CKWNHVVCIED----------KRITRIQIGHQNLQGTLPSNLQ-NLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSN 124 (948)
Q Consensus 57 C~w~gv~c~~~----------~~v~~l~l~~~~l~~~~p~~l~-~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~ 124 (948)
|.|..+.|... ..++.|+|++|+|++..+..+. ++++|++|+|++|+|+++.+ .|.++++|++|+|++
T Consensus 18 C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 18 CASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp EETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 67788888542 4688999999999988888887 99999999999999999887 699999999999999
Q ss_pred ccccCCCCccccCCCCCCEEEccCCCCCCCCCCccccCCCCCCEEEccCccccccCCCCCCC-CCCCCCcEEEccccccc
Q 002238 125 NQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGP-DEFPGLTILHLAFNQLI 203 (948)
Q Consensus 125 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~-~~l~~L~~L~Ls~N~l~ 203 (948)
|+|+++++..|..+++|+.|+|++|+|+. ..|..|..+++|+.|+|++|+|++..+..|.. ..+++|++|+|++|+|+
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~-~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVV-VDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCE-ECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccE-ECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 99999999999999999999999999996 45788999999999999999999876665521 15788888888888887
Q ss_pred c
Q 002238 204 G 204 (948)
Q Consensus 204 ~ 204 (948)
+
T Consensus 177 ~ 177 (361)
T 2xot_A 177 K 177 (361)
T ss_dssp C
T ss_pred c
Confidence 4
No 365
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.72 E-value=1.2e-17 Score=169.06 Aligned_cols=155 Identities=14% Similarity=0.186 Sum_probs=109.9
Q ss_pred CCCCCCcEEEcccccccCCCCccccCCCCCCEEEccCCCCCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCC
Q 002238 112 NGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPG 191 (948)
Q Consensus 112 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~ 191 (948)
..+++|++|+|++|.++.++ .+..+++|++|+|++|.++. +..+..+++|++|++++|++++..+..+. .+++
T Consensus 41 ~~l~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~l~~n~~~~---~~~l~~l~~L~~L~l~~n~l~~~~~~~l~--~l~~ 113 (197)
T 4ezg_A 41 AQMNSLTYITLANINVTDLT--GIEYAHNIKDLTINNIHATN---YNPISGLSNLERLRIMGKDVTSDKIPNLS--GLTS 113 (197)
T ss_dssp HHHHTCCEEEEESSCCSCCT--TGGGCTTCSEEEEESCCCSC---CGGGTTCTTCCEEEEECTTCBGGGSCCCT--TCTT
T ss_pred hhcCCccEEeccCCCccChH--HHhcCCCCCEEEccCCCCCc---chhhhcCCCCCEEEeECCccCcccChhhc--CCCC
Confidence 45666777777777777554 36777777777777776652 34677777777777777777776777776 7788
Q ss_pred CcEEEcccccccccCCCCcccccccceeccCCCCCCccCCCccccccCCCccEEEccCCcccccCCCCCCCCCCcEEecc
Q 002238 192 LTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLR 271 (948)
Q Consensus 192 L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~ 271 (948)
|++|+|++|++++..|.. +.++++|++|+|++|++.+.++.+..+++|+.|+|+
T Consensus 114 L~~L~Ls~n~i~~~~~~~--------------------------l~~l~~L~~L~L~~n~~i~~~~~l~~l~~L~~L~l~ 167 (197)
T 4ezg_A 114 LTLLDISHSAHDDSILTK--------------------------INTLPKVNSIDLSYNGAITDIMPLKTLPELKSLNIQ 167 (197)
T ss_dssp CCEEECCSSBCBGGGHHH--------------------------HTTCSSCCEEECCSCTBCCCCGGGGGCSSCCEEECT
T ss_pred CCEEEecCCccCcHhHHH--------------------------HhhCCCCCEEEccCCCCccccHhhcCCCCCCEEECC
Confidence 888888888877655544 346788888888888733344567778888888888
Q ss_pred CCccccccchhhhCCCCCcEEEcccCcccc
Q 002238 272 DNFFTGPVPDSLVKLESLKIVNMTNNLLQG 301 (948)
Q Consensus 272 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g 301 (948)
+|.+++ ++ .+..+++|+.|++++|++.+
T Consensus 168 ~n~i~~-~~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 168 FDGVHD-YR-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp TBCCCC-CT-TGGGCSSCCEEEECBC----
T ss_pred CCCCcC-hH-HhccCCCCCEEEeeCcccCC
Confidence 888884 44 67888888888888888754
No 366
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.72 E-value=6.7e-17 Score=167.69 Aligned_cols=108 Identities=17% Similarity=0.294 Sum_probs=72.9
Q ss_pred CcEEEcccCCCCCCCCCcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEccCCCCCCCCCC-ccccCCCCCCEEEcc
Q 002238 94 LERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIP-QSLRNASGLQNFSAN 172 (948)
Q Consensus 94 L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p-~~~~~l~~L~~L~l~ 172 (948)
.+.++++++.++.++..+. ++|++|+|++|+|+++++..|..+++|+.|+|++|+|+. +| ..|..+++|++|+|+
T Consensus 21 ~~~v~c~~~~l~~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~--i~~~~~~~l~~L~~L~Ls 96 (229)
T 3e6j_A 21 GTTVDCRSKRHASVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGA--LPVGVFDSLTQLTVLDLG 96 (229)
T ss_dssp TTEEECTTSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC--CCTTTTTTCTTCCEEECC
T ss_pred CCEeEccCCCcCccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCC--cChhhcccCCCcCEEECC
Confidence 4568888888876655443 778888888888888877778888888888888888763 33 345666666666666
Q ss_pred CccccccCCCCCCCCCCCCCcEEEcccccccccCCC
Q 002238 173 SANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPA 208 (948)
Q Consensus 173 ~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 208 (948)
+|+|++..+..|. .+++|++|+|++|+|+ .+|.
T Consensus 97 ~N~l~~l~~~~~~--~l~~L~~L~Ls~N~l~-~lp~ 129 (229)
T 3e6j_A 97 TNQLTVLPSAVFD--RLVHLKELFMCCNKLT-ELPR 129 (229)
T ss_dssp SSCCCCCCTTTTT--TCTTCCEEECCSSCCC-SCCT
T ss_pred CCcCCccChhHhC--cchhhCeEeccCCccc-ccCc
Confidence 6666655555554 5566666666666655 3443
No 367
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.72 E-value=6.1e-18 Score=179.46 Aligned_cols=172 Identities=18% Similarity=0.251 Sum_probs=134.2
Q ss_pred CCCCCcEEEcccCCCCCCCCCcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEccCCCCCCCCCCccccCCCCCCEE
Q 002238 90 NLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNF 169 (948)
Q Consensus 90 ~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L 169 (948)
++.+++.|++++|.+++.. .+..+++|++|+|++|.++.++ .+..+++|+.|+|++|++++ ++. +.++++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~-~~~~l~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~L~~N~i~~--~~~-l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV-SQKELSGVQNFNGDNSNIQSLA--GMQFFTNLKELHLSHNQISD--LSP-LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE-CHHHHTTCSEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCC--CGG-GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccccc-chhhcCcCcEEECcCCCcccch--HHhhCCCCCEEECCCCccCC--Chh-hccCCCCCEE
Confidence 4566777888888887654 6777888888888888888765 47888888888888888884 444 8888888888
Q ss_pred EccCccccccCCCCCCCCCCCCCcEEEcccccccccCCCCcccccccceeccCCCCCCccCCCccccccCCCccEEEccC
Q 002238 170 SANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHS 249 (948)
Q Consensus 170 ~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~ 249 (948)
+|++|++++. |. +. . ++|++|+|++|++++. + . +.++++|+.|+|++
T Consensus 91 ~L~~N~l~~l-~~-~~--~-~~L~~L~L~~N~l~~~-~-~--------------------------l~~l~~L~~L~Ls~ 137 (263)
T 1xeu_A 91 SVNRNRLKNL-NG-IP--S-ACLSRLFLDNNELRDT-D-S--------------------------LIHLKNLEILSIRN 137 (263)
T ss_dssp ECCSSCCSCC-TT-CC--C-SSCCEEECCSSCCSBS-G-G--------------------------GTTCTTCCEEECTT
T ss_pred ECCCCccCCc-Cc-cc--c-CcccEEEccCCccCCC-h-h--------------------------hcCcccccEEECCC
Confidence 8888888764 33 22 3 7888899998888753 2 1 34788899999999
Q ss_pred CcccccCCCCCCCCCCcEEeccCCccccccchhhhCCCCCcEEEcccCcccccC
Q 002238 250 NAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPV 303 (948)
Q Consensus 250 N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~ 303 (948)
|++++. +.+..+++|+.|+|++|++++. ..+..+++|+.|+|++|++++..
T Consensus 138 N~i~~~-~~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~~ 188 (263)
T 1xeu_A 138 NKLKSI-VMLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNEP 188 (263)
T ss_dssp SCCCBC-GGGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECCC
T ss_pred CcCCCC-hHHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCCc
Confidence 988875 4677888999999999999865 66888899999999999988653
No 368
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.71 E-value=3.9e-20 Score=217.50 Aligned_cols=122 Identities=16% Similarity=0.184 Sum_probs=75.1
Q ss_pred CccEEEccCCcccccCCCCCCCCCCcEEeccCCccccccchhhhCCCCCcEEEcccCcccccCCCCCCccccccccccCC
Q 002238 241 SLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNN 320 (948)
Q Consensus 241 ~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~ 320 (948)
.|+.|+|++|++++. |.+..+++|+.|+|++|+|+ .+|..++++++|+.|+|++|+|++ +|.+.
T Consensus 442 ~L~~L~Ls~n~l~~l-p~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp~l~------------- 505 (567)
T 1dce_A 442 DVRVLHLAHKDLTVL-CHLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VDGVA------------- 505 (567)
T ss_dssp TCSEEECTTSCCSSC-CCGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CGGGT-------------
T ss_pred CceEEEecCCCCCCC-cCccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-CcccC-------------
Confidence 466777777777763 34666777777777777777 667777777777777777777664 23211
Q ss_pred CCCCCCCCCchhhhhhHHHHHhhCCcchhccccCCCCCCCCccceeecCCceEEEEccCCcccccC-CccccCccccceE
Q 002238 321 FCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTI-SPEFASFKSLQRL 399 (948)
Q Consensus 321 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~g~i-p~~~~~l~~L~~L 399 (948)
.+++|+.|+|++|+|++.+ |..|+.+++|+.|
T Consensus 506 -----------------------------------------------~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L 538 (567)
T 1dce_A 506 -----------------------------------------------NLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLL 538 (567)
T ss_dssp -----------------------------------------------TCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEE
T ss_pred -----------------------------------------------CCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEE
Confidence 2235666666666666655 6666666666666
Q ss_pred eCccccccccCCcC---CcCCCCCcEEEc
Q 002238 400 ILADNNLSGMIPEG---LSVLGALKELDV 425 (948)
Q Consensus 400 ~Ls~N~l~g~ip~~---l~~l~~L~~L~l 425 (948)
+|++|+|++..|.. +..+++|+.||+
T Consensus 539 ~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 539 NLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp ECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred EecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 66666666544321 123566666653
No 369
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.70 E-value=2.5e-17 Score=166.66 Aligned_cols=154 Identities=14% Similarity=0.209 Sum_probs=96.5
Q ss_pred cCCCCCcEEEcccCCCCCCCCCcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEccCCCCCCCCCCccccCCCCCCE
Q 002238 89 QNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQN 168 (948)
Q Consensus 89 ~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~ 168 (948)
..+++|++|++++|.|+.. |.+..+++|++|+|++|.++.+. .+..+++|++|+|++|++++ ..|..+..+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~~l-~~l~~l~~L~~L~l~~n~~~~~~--~l~~l~~L~~L~l~~n~l~~-~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVTDL-TGIEYAHNIKDLTINNIHATNYN--PISGLSNLERLRIMGKDVTS-DKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCSCC-TTGGGCTTCSEEEEESCCCSCCG--GGTTCTTCCEEEEECTTCBG-GGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCccCh-HHHhcCCCCCEEEccCCCCCcch--hhhcCCCCCEEEeECCccCc-ccChhhcCCCCCCE
Confidence 4455666666666666633 35666666666666666554432 46666677777777776664 45666666777777
Q ss_pred EEccCccccccCCCCCCCCCCCCCcEEEcccccccccCCCCcccccccceeccCCCCCCccCCCccccccCCCccEEEcc
Q 002238 169 FSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLH 248 (948)
Q Consensus 169 L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls 248 (948)
|++++|++++..+..+. .+++|++|+|++|++.+.+| . +.++++|+.|+|+
T Consensus 117 L~Ls~n~i~~~~~~~l~--~l~~L~~L~L~~n~~i~~~~-~--------------------------l~~l~~L~~L~l~ 167 (197)
T 4ezg_A 117 LDISHSAHDDSILTKIN--TLPKVNSIDLSYNGAITDIM-P--------------------------LKTLPELKSLNIQ 167 (197)
T ss_dssp EECCSSBCBGGGHHHHT--TCSSCCEEECCSCTBCCCCG-G--------------------------GGGCSSCCEEECT
T ss_pred EEecCCccCcHhHHHHh--hCCCCCEEEccCCCCccccH-h--------------------------hcCCCCCCEEECC
Confidence 77777777666666665 67777777777776222333 1 3356777777777
Q ss_pred CCcccccCCCCCCCCCCcEEeccCCccc
Q 002238 249 SNAFSGPLPDFSGVKQLESLSLRDNFFT 276 (948)
Q Consensus 249 ~N~l~~~~~~~~~l~~L~~L~L~~N~l~ 276 (948)
+|++++. +.+..+++|+.|++++|+|.
T Consensus 168 ~n~i~~~-~~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 168 FDGVHDY-RGIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp TBCCCCC-TTGGGCSSCCEEEECBC---
T ss_pred CCCCcCh-HHhccCCCCCEEEeeCcccC
Confidence 7777653 35666777777777777765
No 370
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.70 E-value=7.6e-20 Score=218.98 Aligned_cols=365 Identities=13% Similarity=0.080 Sum_probs=182.7
Q ss_pred CCEEEEEeCCCCCcCCCCcccc-CCCCCcEEEcccC-CCCCC-CCC-cCCCCCCcEEEcccccccCCCCcccc----CCC
Q 002238 68 KRITRIQIGHQNLQGTLPSNLQ-NLTKLERLELQWN-SISGP-LPS-LNGLASLEVVMLSNNQFTSVPSDFFT----GLS 139 (948)
Q Consensus 68 ~~v~~l~l~~~~l~~~~p~~l~-~l~~L~~L~L~~N-~l~~~-~p~-~~~l~~L~~L~L~~N~l~~~~~~~~~----~l~ 139 (948)
.+++.|+|++|.+++..+..+. .+++|++|+|++| .++.. ++. +.++++|++|+|++|.+++..+..+. .++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 3566677776666655544454 4666777777666 34331 222 23566777777777766654443333 455
Q ss_pred CCCEEEccCCC--CCCCCCCccccCCCCCCEEEccCc-cccccCCCCCCCCCCCCCcEEEcccc-------cccccCCCC
Q 002238 140 SLQSIEIDNNP--FSSWEIPQSLRNASGLQNFSANSA-NITGQIPSFFGPDEFPGLTILHLAFN-------QLIGGLPAS 209 (948)
Q Consensus 140 ~L~~L~Ls~N~--l~~~~~p~~~~~l~~L~~L~l~~n-~l~~~~p~~~~~~~l~~L~~L~Ls~N-------~l~~~~p~~ 209 (948)
+|+.|+|++|. +....++..+.++++|++|++++| .+.+ ++..+. .+++|+.|+++.+ .+.+.. ..
T Consensus 185 ~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~--~~~~L~~L~l~~~~~~~~~~~~~~l~-~~ 260 (594)
T 2p1m_B 185 SLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQ--RAPQLEELGTGGYTAEVRPDVYSGLS-VA 260 (594)
T ss_dssp CCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHH--HCTTCSEEECSBCCCCCCHHHHHHHH-HH
T ss_pred cCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHh--cCCcceEcccccccCccchhhHHHHH-HH
Confidence 67777777665 211011222334567777777766 3333 444444 5666666664433 222211 11
Q ss_pred ccc-ccccceeccCCCCCCccCCCccccccCCCccEEEccCCcccccCC-C-CCCCCCCcEEeccCCcccc-ccchhhhC
Q 002238 210 FSG-SQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-D-FSGVKQLESLSLRDNFFTG-PVPDSLVK 285 (948)
Q Consensus 210 ~~~-~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~-~~~l~~L~~L~L~~N~l~~-~~p~~l~~ 285 (948)
+.. .+++.|. +... ......+..+..+++|++|+|++|.+++... . +..+++|+.|++++| +.. .++.....
T Consensus 261 l~~~~~L~~Ls--~~~~-~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~ 336 (594)
T 2p1m_B 261 LSGCKELRCLS--GFWD-AVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLAST 336 (594)
T ss_dssp HHTCTTCCEEE--CCBT-CCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHH
T ss_pred HhcCCCccccc--CCcc-cchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHh
Confidence 111 1222221 1110 1112223334467788888888888664322 2 345677888888877 432 23333345
Q ss_pred CCCCcEEEccc---------Cccccc-CCCC-CCccccccccccCCCCCCCCCCCchhhhhhHHHHHhhCCcchhccccC
Q 002238 286 LESLKIVNMTN---------NLLQGP-VPEF-DRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWK 354 (948)
Q Consensus 286 l~~L~~L~Ls~---------N~l~g~-~p~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 354 (948)
+++|+.|+|++ |.+++. +..+ ..+.+|+.+....+.... ..+..+.........+...+.
T Consensus 337 ~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~---------~~~~~l~~~~~~L~~L~L~~~ 407 (594)
T 2p1m_B 337 CKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTN---------AALITIARNRPNMTRFRLCII 407 (594)
T ss_dssp CTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCH---------HHHHHHHHHCTTCCEEEEEES
T ss_pred CCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCH---------HHHHHHHhhCCCcceeEeecc
Confidence 77778877732 344321 0000 012222222222221110 011111111111222222211
Q ss_pred CCCCCCCc--------c-ceeecCCceEEEEccCCcccccCCccccC-ccccceEeCccccccccCCcCC-cCCCCCcEE
Q 002238 355 GNDPCSDW--------I-GVTCTKGNITVINFQKMNLTGTISPEFAS-FKSLQRLILADNNLSGMIPEGL-SVLGALKEL 423 (948)
Q Consensus 355 ~~~~~~~~--------~-~~~~~~~~L~~L~ls~n~l~g~ip~~~~~-l~~L~~L~Ls~N~l~g~ip~~l-~~l~~L~~L 423 (948)
+...|... + ..+..+++|+.|+|++ .+++..+..++. +++|+.|+|++|.+++..+..+ ..+++|++|
T Consensus 408 ~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L 486 (594)
T 2p1m_B 408 EPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKL 486 (594)
T ss_dssp STTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEE
T ss_pred cCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEE
Confidence 10001000 0 1133456788888877 676666666665 7888888888888876555444 567888888
Q ss_pred EccCCcccCCCC-----CCCcccccccCCCCC
Q 002238 424 DVSNNQLYGKIP-----SFKSNAIVNTDGNPD 450 (948)
Q Consensus 424 ~ls~N~l~g~ip-----~~~~~~~~~~~gnp~ 450 (948)
+|++|++++..+ .+.....+.+.+|+.
T Consensus 487 ~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 487 EIRDCPFGDKALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp EEESCSCCHHHHHHTGGGGGGSSEEEEESSCC
T ss_pred ECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCC
Confidence 888888854322 234455666666643
No 371
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.70 E-value=4e-20 Score=217.41 Aligned_cols=191 Identities=17% Similarity=0.162 Sum_probs=140.9
Q ss_pred cCCCCCCEEEccCCCCCCCCCCccccCCCCCCEEEccCcc-------------ccccCCCCCCCCCCCCCcEEE-ccccc
Q 002238 136 TGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSAN-------------ITGQIPSFFGPDEFPGLTILH-LAFNQ 201 (948)
Q Consensus 136 ~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~-------------l~~~~p~~~~~~~l~~L~~L~-Ls~N~ 201 (948)
..+++|+.|+|++|+++ .+|..++++++|+.|++++|. +.+.+|..++ .+++|+.|+ ++.|.
T Consensus 346 ~~~~~L~~L~Ls~n~L~--~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~--~l~~L~~L~~l~~n~ 421 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST--VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQ--YFSTLKAVDPMRAAY 421 (567)
T ss_dssp STTTTSSSCCCCHHHHH--HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHH--HHHHHHHHCGGGHHH
T ss_pred ccCccceeccCChhhHH--hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHH--HHHhcccCcchhhcc
Confidence 45666666666666665 566666666666666665543 2333333333 334444444 33332
Q ss_pred ccccCCCCcccccccceeccCCCCCCccCCCccccccCCCccEEEccCCcccccCCCCCCCCCCcEEeccCCccccccch
Q 002238 202 LIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPD 281 (948)
Q Consensus 202 l~~~~p~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~ 281 (948)
+++|..+.+++|.++...+ ..|+.|+|++|+|++ +|.
T Consensus 422 -------------------------------------~~~L~~l~l~~n~i~~l~~-----~~L~~L~Ls~n~l~~-lp~ 458 (567)
T 1dce_A 422 -------------------------------------LDDLRSKFLLENSVLKMEY-----ADVRVLHLAHKDLTV-LCH 458 (567)
T ss_dssp -------------------------------------HHHHHHHHHHHHHHHHHHH-----TTCSEEECTTSCCSS-CCC
T ss_pred -------------------------------------cchhhhhhhhcccccccCc-----cCceEEEecCCCCCC-CcC
Confidence 2345556667777765433 358999999999995 777
Q ss_pred hhhCCCCCcEEEcccCcccccCCCCCCccccccccccCCCCCCCCCCCchhhhhhHHHHHhhCCcchhccccCCCCCCCC
Q 002238 282 SLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSD 361 (948)
Q Consensus 282 ~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (948)
++.+++|+.|+|++|+|+ .+|.
T Consensus 459 -~~~l~~L~~L~Ls~N~l~-~lp~-------------------------------------------------------- 480 (567)
T 1dce_A 459 -LEQLLLVTHLDLSHNRLR-ALPP-------------------------------------------------------- 480 (567)
T ss_dssp -GGGGTTCCEEECCSSCCC-CCCG--------------------------------------------------------
T ss_pred -ccccccCcEeecCccccc-ccch--------------------------------------------------------
Confidence 999999999999999998 4553
Q ss_pred ccceeecCCceEEEEccCCcccccCCccccCccccceEeCccccccccC-CcCCcCCCCCcEEEccCCcccCCCCC
Q 002238 362 WIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMI-PEGLSVLGALKELDVSNNQLYGKIPS 436 (948)
Q Consensus 362 ~~~~~~~~~~L~~L~ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~i-p~~l~~l~~L~~L~ls~N~l~g~ip~ 436 (948)
.+..+++|+.|+|++|.|++ +| .|+++++|+.|+|++|+|++.+ |..|..+++|+.|+|++|+|++.+|.
T Consensus 481 ---~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 481 ---ALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp ---GGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred ---hhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 12345689999999999997 67 8999999999999999999887 99999999999999999999998775
No 372
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.69 E-value=3.5e-17 Score=173.53 Aligned_cols=168 Identities=14% Similarity=0.248 Sum_probs=142.0
Q ss_pred CEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCCCcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEccC
Q 002238 69 RITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDN 148 (948)
Q Consensus 69 ~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 148 (948)
+++.++++.+++++.. .+..+++|++|++++|.|+.. +.+..+++|++|+|++|+|+++++ |..+++|+.|+|++
T Consensus 20 ~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~l-~~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~ 94 (263)
T 1xeu_A 20 NAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQSL-AGMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNR 94 (263)
T ss_dssp HHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCCC-TTGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCS
T ss_pred HHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcccc-hHHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCC
Confidence 3455667778877443 578899999999999999865 478899999999999999999887 99999999999999
Q ss_pred CCCCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccccCCCCcccccccceeccCCCCCCc
Q 002238 149 NPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAK 228 (948)
Q Consensus 149 N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~~ 228 (948)
|++++ +|.... ++|+.|+|++|++++. + .+. .+++|++|+|++|++++. + .
T Consensus 95 N~l~~--l~~~~~--~~L~~L~L~~N~l~~~-~-~l~--~l~~L~~L~Ls~N~i~~~-~-~------------------- 145 (263)
T 1xeu_A 95 NRLKN--LNGIPS--ACLSRLFLDNNELRDT-D-SLI--HLKNLEILSIRNNKLKSI-V-M------------------- 145 (263)
T ss_dssp SCCSC--CTTCCC--SSCCEEECCSSCCSBS-G-GGT--TCTTCCEEECTTSCCCBC-G-G-------------------
T ss_pred CccCC--cCcccc--CcccEEEccCCccCCC-h-hhc--CcccccEEECCCCcCCCC-h-H-------------------
Confidence 99995 554333 9999999999999975 3 455 899999999999999854 2 2
Q ss_pred cCCCccccccCCCccEEEccCCcccccCCCCCCCCCCcEEeccCCccccc
Q 002238 229 LGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGP 278 (948)
Q Consensus 229 ~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~ 278 (948)
+..+++|+.|+|++|++++. +.+..+++|+.|+|++|.+++.
T Consensus 146 -------l~~l~~L~~L~L~~N~i~~~-~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 146 -------LGFLSKLEVLDLHGNEITNT-GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp -------GGGCTTCCEEECTTSCCCBC-TTSTTCCCCCEEEEEEEEEECC
T ss_pred -------HccCCCCCEEECCCCcCcch-HHhccCCCCCEEeCCCCcccCC
Confidence 45789999999999999987 7788999999999999999954
No 373
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.67 E-value=1.1e-17 Score=203.05 Aligned_cols=193 Identities=16% Similarity=0.151 Sum_probs=123.1
Q ss_pred EEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCCCcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEccCCCCC
Q 002238 73 IQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFS 152 (948)
Q Consensus 73 l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 152 (948)
+++..|.+. ..+..+..++.|+.|+|++|.|..+++.+.++++|++|+|++|.|+. +|..|++|++|++|+|++|+|+
T Consensus 206 ~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~~l~~~~~~l~~L~~L~Ls~N~l~~-lp~~~~~l~~L~~L~Ls~N~l~ 283 (727)
T 4b8c_D 206 DDDIENRMV-MPKDSKYDDQLWHALDLSNLQIFNISANIFKYDFLTRLYLNGNSLTE-LPAEIKNLSNLRVLDLSHNRLT 283 (727)
T ss_dssp -----------------CCCCCCEEECTTSCCSCCCGGGGGCCSCSCCBCTTSCCSC-CCGGGGGGTTCCEEECTTSCCS
T ss_pred cccccccee-cChhhhccCCCCcEEECCCCCCCCCChhhcCCCCCCEEEeeCCcCcc-cChhhhCCCCCCEEeCcCCcCC
Confidence 333333333 45778999999999999999999766678899999999999999994 4567899999999999999999
Q ss_pred CCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccccCCCCcccccccceeccCCCCCCccCCC
Q 002238 153 SWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGG 232 (948)
Q Consensus 153 ~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~~~~~~ 232 (948)
.+|..+.++++|++|+|++|.|+ .+|..|+ .+++|++|+|++|+|++.+|..+.
T Consensus 284 --~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~--~l~~L~~L~L~~N~l~~~~p~~~~--------------------- 337 (727)
T 4b8c_D 284 --SLPAELGSCFQLKYFYFFDNMVT-TLPWEFG--NLCNLQFLGVEGNPLEKQFLKILT--------------------- 337 (727)
T ss_dssp --SCCSSGGGGTTCSEEECCSSCCC-CCCSSTT--SCTTCCCEECTTSCCCSHHHHHHH---------------------
T ss_pred --ccChhhcCCCCCCEEECCCCCCC-ccChhhh--cCCCccEEeCCCCccCCCChHHHh---------------------
Confidence 68999999999999999999997 6777787 899999999999999998887753
Q ss_pred ccccccC-CCccEEEccCCcccccCCCCCCCCCCcEEeccCC--------ccccccchhhhCCCCCcEEEcccCcccccC
Q 002238 233 IDVIQNM-TSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDN--------FFTGPVPDSLVKLESLKIVNMTNNLLQGPV 303 (948)
Q Consensus 233 ~~~l~~l-~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N--------~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~ 303 (948)
.+ ..+..|+|++|.+++.+| ..|+.|++++| .|.+..+..+.++..+....+++|-+.+..
T Consensus 338 -----~~~~~~~~l~l~~N~l~~~~p-----~~l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~~~~ 407 (727)
T 4b8c_D 338 -----EKSVTGLIFYLRDNRPEIPLP-----HERRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLCQHY 407 (727)
T ss_dssp -----HHHHHHHHHHHHHCCCCCCCC-----CC-----------------------------------------CCCGGG
T ss_pred -----hcchhhhHHhhccCcccCcCc-----cccceeEeecccccccccCCccccccchhhcccccceeeeecccccccc
Confidence 11 122347899999998777 35677777777 444455555667777788888888876543
No 374
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.65 E-value=5.3e-16 Score=156.10 Aligned_cols=131 Identities=21% Similarity=0.285 Sum_probs=118.4
Q ss_pred EEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCCC--cCCCCCCcEEEcccccccCCCCccccCCCCCCEEEccC
Q 002238 71 TRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLPS--LNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDN 148 (948)
Q Consensus 71 ~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~--~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 148 (948)
+.+++++++++ .+|..+.. +|++|+|++|+|++.++. |.++++|++|+|++|+|++++|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 45778888886 78877654 899999999999998874 88999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccccCC
Q 002238 149 NPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLP 207 (948)
Q Consensus 149 N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p 207 (948)
|+|++ ..|..+.++++|++|+|++|+|++.+|..|. .+++|++|+|++|.+.+..+
T Consensus 88 N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKE-ISNKMFLGLHQLKTLNLYDNQISCVMPGSFE--HLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCE-ECSSSSTTCTTCCEEECCSSCCCEECTTSST--TCTTCCEEECTTCCBCCSGG
T ss_pred CcCCc-cCHHHhcCCCCCCEEECCCCcCCeeCHHHhh--cCCCCCEEEeCCCCccCcCc
Confidence 99996 4566799999999999999999999999997 89999999999999997655
No 375
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.65 E-value=2.8e-16 Score=158.17 Aligned_cols=111 Identities=21% Similarity=0.298 Sum_probs=76.5
Q ss_pred cEEEcccCCCCCCCCCcCCCCCCcEEEcccccccCCCCc-cccCCCCCCEEEccCCCCCCCCCCccccCCCCCCEEEccC
Q 002238 95 ERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSD-FFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANS 173 (948)
Q Consensus 95 ~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~ 173 (948)
+.|++++|+|+.++..+.. +|++|+|++|+|+++++. .|+.+++|++|+|++|+|++ ..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLKEIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTG-IEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCSSCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCC-BCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcCcCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCC-cCHhHcCCcccCCEEECCC
Confidence 5778888877655444433 777777777777777764 47777777777777777775 4466677777777777777
Q ss_pred ccccccCCCCCCCCCCCCCcEEEcccccccccCCCCc
Q 002238 174 ANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASF 210 (948)
Q Consensus 174 n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 210 (948)
|+|++..+..|. .+++|++|+|++|++++..|..|
T Consensus 88 N~l~~~~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~ 122 (192)
T 1w8a_A 88 NKIKEISNKMFL--GLHQLKTLNLYDNQISCVMPGSF 122 (192)
T ss_dssp CCCCEECSSSST--TCTTCCEEECCSSCCCEECTTSS
T ss_pred CcCCccCHHHhc--CCCCCCEEECCCCcCCeeCHHHh
Confidence 777766666665 66677777777777666655554
No 376
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.64 E-value=2.3e-18 Score=206.07 Aligned_cols=321 Identities=14% Similarity=0.132 Sum_probs=208.7
Q ss_pred CCEEEEEeCCC-CCcCC-CCccccCCCCCcEEEcccCCCCCCCC----C-cCCCCCCcEEEcccccccCCCCcc----cc
Q 002238 68 KRITRIQIGHQ-NLQGT-LPSNLQNLTKLERLELQWNSISGPLP----S-LNGLASLEVVMLSNNQFTSVPSDF----FT 136 (948)
Q Consensus 68 ~~v~~l~l~~~-~l~~~-~p~~l~~l~~L~~L~L~~N~l~~~~p----~-~~~l~~L~~L~L~~N~l~~~~~~~----~~ 136 (948)
.+++.|+|++| .++.. ++..+.++++|++|+|++|.+++..+ . ...+++|++|+|++|. ..+.... +.
T Consensus 130 ~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~-~~~~~~~l~~l~~ 208 (594)
T 2p1m_B 130 KNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLA-SEVSFSALERLVT 208 (594)
T ss_dssp TTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCC-SCCCHHHHHHHHH
T ss_pred CCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccC-CcCCHHHHHHHHH
Confidence 58999999988 55532 44445578999999999998776433 2 3367899999999987 2222222 34
Q ss_pred CCCCCCEEEccCCCCCCCCCCccccCCCCCCEEEccCcc--------------------------cc----ccCCCCCCC
Q 002238 137 GLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSAN--------------------------IT----GQIPSFFGP 186 (948)
Q Consensus 137 ~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~--------------------------l~----~~~p~~~~~ 186 (948)
++++|+.|+|++|.... .+|..+.++++|+.|++..+. +. +.++..+.
T Consensus 209 ~~~~L~~L~L~~~~~~~-~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~~~l~~~~~- 286 (594)
T 2p1m_B 209 RCPNLKSLKLNRAVPLE-KLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYS- 286 (594)
T ss_dssp HCTTCCEEECCTTSCHH-HHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCGGGGGGGHH-
T ss_pred hCCCCcEEecCCCCcHH-HHHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccchhhHHHHHH-
Confidence 56999999999883222 366777777888888755442 11 11222222
Q ss_pred CCCCCCcEEEcccccccccCCCCc-c-cccccceeccCCCCCCccCCCccccccCCCccEEEccC---------Cccccc
Q 002238 187 DEFPGLTILHLAFNQLIGGLPASF-S-GSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHS---------NAFSGP 255 (948)
Q Consensus 187 ~~l~~L~~L~Ls~N~l~~~~p~~~-~-~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~---------N~l~~~ 255 (948)
.+++|++|+|++|.+++.....+ . ..+|+.|++.++. ...+.......+++|++|+|++ |.+++.
T Consensus 287 -~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~~---~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~ 362 (594)
T 2p1m_B 287 -VCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDYI---EDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQ 362 (594)
T ss_dssp -HHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGGG---HHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHH
T ss_pred -hhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCcc---CHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHH
Confidence 46899999999998765432221 1 1467788777541 1112222334689999999943 455442
Q ss_pred C-CCC-CCCCCCcEEeccCCccccccchhhh-CCCCCcEEEcc--c----CcccccCCC------CCCccccccccccCC
Q 002238 256 L-PDF-SGVKQLESLSLRDNFFTGPVPDSLV-KLESLKIVNMT--N----NLLQGPVPE------FDRSVSLDMAKGSNN 320 (948)
Q Consensus 256 ~-~~~-~~l~~L~~L~L~~N~l~~~~p~~l~-~l~~L~~L~Ls--~----N~l~g~~p~------~~~~~~l~~~~~~~~ 320 (948)
. ..+ .++++|+.|.+..|++++..+..+. .+++|+.|+|+ + |.+++...+ +..+.+|+.++..++
T Consensus 363 ~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~~ 442 (594)
T 2p1m_B 363 GLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSGL 442 (594)
T ss_dssp HHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCSS
T ss_pred HHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecCc
Confidence 1 122 2378999999999999977777776 58999999999 4 455521110 122233333333221
Q ss_pred CCCCCCCCCchhhhhhHHHHHhhCCcchhccccCCCCCCCCccceee-cCCceEEEEccCCcccccCCccc-cCccccce
Q 002238 321 FCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTC-TKGNITVINFQKMNLTGTISPEF-ASFKSLQR 398 (948)
Q Consensus 321 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~L~~L~ls~n~l~g~ip~~~-~~l~~L~~ 398 (948)
. . .. . ...+. .+++|+.|+|++|.+++..+..+ ..+++|+.
T Consensus 443 l----~---~~---~---------------------------~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~ 485 (594)
T 2p1m_B 443 L----T---DK---V---------------------------FEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRK 485 (594)
T ss_dssp C----C---HH---H---------------------------HHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCE
T ss_pred c----c---HH---H---------------------------HHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCE
Confidence 0 0 00 0 00111 25689999999999988766666 67999999
Q ss_pred EeCccccccccCCc-CCcCCCCCcEEEccCCcccC
Q 002238 399 LILADNNLSGMIPE-GLSVLGALKELDVSNNQLYG 432 (948)
Q Consensus 399 L~Ls~N~l~g~ip~-~l~~l~~L~~L~ls~N~l~g 432 (948)
|+|++|.+++..+. .+..+++|++|++++|+++.
T Consensus 486 L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~ 520 (594)
T 2p1m_B 486 LEIRDCPFGDKALLANASKLETMRSLWMSSCSVSF 520 (594)
T ss_dssp EEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBH
T ss_pred EECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCH
Confidence 99999999765544 44568999999999999853
No 377
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.64 E-value=4.2e-16 Score=153.32 Aligned_cols=137 Identities=18% Similarity=0.191 Sum_probs=123.2
Q ss_pred CCEEEEEeCCCCCc-CCCCccccCCCCCcEEEcccCCCCCCCCCcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEc
Q 002238 68 KRITRIQIGHQNLQ-GTLPSNLQNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEI 146 (948)
Q Consensus 68 ~~v~~l~l~~~~l~-~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 146 (948)
.+++.|++++|+++ +.+|..+..+++|++|+|++|.|++. +.+..+++|++|+|++|++++.+|..+..+++|++|+|
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 102 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNL 102 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC-SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEEC
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh-hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEec
Confidence 57999999999998 88999999999999999999999988 88999999999999999999988888889999999999
Q ss_pred cCCCCCCCCCCccccCCCCCCEEEccCccccccCC---CCCCCCCCCCCcEEEcccccccccCCC
Q 002238 147 DNNPFSSWEIPQSLRNASGLQNFSANSANITGQIP---SFFGPDEFPGLTILHLAFNQLIGGLPA 208 (948)
Q Consensus 147 s~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p---~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 208 (948)
++|+++++..+..+..+++|+.|++++|.+++..+ ..+. .+++|++|++++|.+. .+|.
T Consensus 103 s~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~--~l~~L~~L~l~~n~~~-~~~~ 164 (168)
T 2ell_A 103 SGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFK--LLPQLTYLDGYDREDQ-EAPD 164 (168)
T ss_dssp BSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHT--TCSSCCEETTEETTSC-BCCS
T ss_pred cCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHH--hCccCcEecCCCCChh-hccc
Confidence 99999953333789999999999999999997766 4665 8999999999999987 4443
No 378
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.63 E-value=1.1e-16 Score=175.20 Aligned_cols=138 Identities=14% Similarity=0.169 Sum_probs=100.4
Q ss_pred CCcccceecccCceEEEEEEEcCCcEEEEEEeecCcCC------------hhhHH--------HHHHHHHHHHhcCCCce
Q 002238 594 NFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVIS------------GKGLT--------EFKSEIAVLTKVRHRHL 653 (948)
Q Consensus 594 ~~~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~------------~~~~~--------~~~~E~~~l~~l~H~ni 653 (948)
-|++.+.||+|+||.||+|...+|+.||||+++..... ..... ...+|...|.++.+..+
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 38999999999999999999889999999987543111 00011 12356777777754443
Q ss_pred e--eEEeEEEeCCceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEE
Q 002238 654 V--ALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNIL 731 (948)
Q Consensus 654 v--~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nil 731 (948)
. ..+++ ...+|||||++|++|.++.. . .....++.|++.+|.|||. .|||||||||.|||
T Consensus 176 ~vp~p~~~----~~~~LVME~i~G~~L~~l~~---------~--~~~~~l~~qll~~l~~lH~---~gIVHrDLKp~NIL 237 (397)
T 4gyi_A 176 PVPEPIAQ----SRHTIVMSLVDALPMRQVSS---------V--PDPASLYADLIALILRLAK---HGLIHGDFNEFNIL 237 (397)
T ss_dssp SCCCEEEE----ETTEEEEECCSCEEGGGCCC---------C--SCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEE
T ss_pred CCCeeeec----cCceEEEEecCCccHhhhcc---------c--HHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEE
Confidence 2 22221 23379999999988865431 1 1234678999999999997 89999999999999
Q ss_pred EcCCCC----------eEEeecCCceec
Q 002238 732 LGDDMR----------AKVADFGLVRLA 749 (948)
Q Consensus 732 l~~~~~----------~kl~DfGla~~~ 749 (948)
+++++. +.|+||+-+...
T Consensus 238 l~~dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 238 IREEKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp EEEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred EeCCCCcccccccccceEEEEeCCcccC
Confidence 987763 899999976643
No 379
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.61 E-value=2.9e-15 Score=148.59 Aligned_cols=134 Identities=21% Similarity=0.355 Sum_probs=113.9
Q ss_pred CCccceEEeCCCCEEEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEcccccccCCCCccc
Q 002238 57 CKWNHVVCIEDKRITRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFF 135 (948)
Q Consensus 57 C~w~gv~c~~~~~v~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~~~ 135 (948)
|.|.++.|. +++++ .+|..+. ++|++|+|++|++++.++ .|.++++|++|+|++|+|+++++..|
T Consensus 7 C~~~~l~~~-----------~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 72 (177)
T 2o6r_A 7 CSGTEIRCN-----------SKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVF 72 (177)
T ss_dssp EETTEEECC-----------SSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTT
T ss_pred eCCCEEEec-----------CCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHc
Confidence 567766664 45555 4565443 789999999999998777 57899999999999999999999999
Q ss_pred cCCCCCCEEEccCCCCCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccccCC
Q 002238 136 TGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLP 207 (948)
Q Consensus 136 ~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p 207 (948)
..+++|+.|+|++|++++ ..+..+..+++|++|++++|++++..+..|. .+++|++|+|++|++.+..|
T Consensus 73 ~~l~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~--~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 73 DKLTKLTILYLHENKLQS-LPNGVFDKLTQLKELALDTNQLKSVPDGIFD--RLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp TTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCSCCCTTTTT--TCTTCCEEECCSSCBCCCHH
T ss_pred cCCCccCEEECCCCCccc-cCHHHhhCCcccCEEECcCCcceEeCHHHhc--CCcccCEEEecCCCeeccCc
Confidence 999999999999999995 3455678999999999999999987777776 89999999999999987655
No 380
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.60 E-value=6.2e-16 Score=148.74 Aligned_cols=129 Identities=16% Similarity=0.204 Sum_probs=113.6
Q ss_pred CCEEEEEeCCCCCc-CCCCccccCCCCCcEEEcccCCCCCCCCCcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEc
Q 002238 68 KRITRIQIGHQNLQ-GTLPSNLQNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEI 146 (948)
Q Consensus 68 ~~v~~l~l~~~~l~-~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 146 (948)
.+++.|++++|+++ +.+|..+..+++|++|+|++|.|++. +.+..+++|++|+|++|.+++.+|..+..+++|++|+|
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 95 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI-ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNL 95 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC-TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEEC
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc-hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEEC
Confidence 47889999999998 88999899999999999999999987 78899999999999999999988888888999999999
Q ss_pred cCCCCCCCCCCccccCCCCCCEEEccCccccccCC---CCCCCCCCCCCcEEEccc
Q 002238 147 DNNPFSSWEIPQSLRNASGLQNFSANSANITGQIP---SFFGPDEFPGLTILHLAF 199 (948)
Q Consensus 147 s~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p---~~~~~~~l~~L~~L~Ls~ 199 (948)
++|++++...+..+..+++|++|++++|.+++..+ ..+. .+++|++|++++
T Consensus 96 s~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~--~l~~L~~L~l~d 149 (149)
T 2je0_A 96 SGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFK--LLPQLTYLDGYD 149 (149)
T ss_dssp TTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHH--HCTTCCEETTBC
T ss_pred CCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHH--HCCCcccccCCC
Confidence 99999853234889999999999999999997766 4565 789999998864
No 381
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.59 E-value=6.4e-15 Score=148.12 Aligned_cols=128 Identities=19% Similarity=0.312 Sum_probs=114.9
Q ss_pred EEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCCCcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEccCCCC
Q 002238 72 RIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPF 151 (948)
Q Consensus 72 ~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 151 (948)
.+++++++++ .+|..+. ++|++|+|++|+|+.+++.|.++++|++|+|++|+|+++++..|.++++|++|+|++|+|
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l 90 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 90 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCSCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCchhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCcc
Confidence 5778888888 6777664 689999999999997666899999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEccccccccc
Q 002238 152 SSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGG 205 (948)
Q Consensus 152 ~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~ 205 (948)
+. ..|..|..+++|++|+|++|+|+...+..|. .+++|++|+|++|.+.+.
T Consensus 91 ~~-i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 91 RC-IPPRTFDGLKSLRLLSLHGNDISVVPEGAFN--DLSALSHLAIGANPLYCD 141 (193)
T ss_dssp CB-CCTTTTTTCTTCCEEECCSSCCCBCCTTTTT--TCTTCCEEECCSSCEECS
T ss_pred CE-eCHHHhCCCCCCCEEECCCCCCCeeChhhhh--cCccccEEEeCCCCeecC
Confidence 96 4466899999999999999999988877887 899999999999999753
No 382
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.58 E-value=4.7e-15 Score=145.74 Aligned_cols=134 Identities=19% Similarity=0.186 Sum_probs=87.1
Q ss_pred CCCCEEEccCCCCCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccccCCCCcccccccce
Q 002238 139 SSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSL 218 (948)
Q Consensus 139 ~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l 218 (948)
++|+.|+|++|+++...+|..+..+++|++|++++|.+++. ..+. .+++|++|+|++|++++.+|..+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~--~l~~L~~L~Ls~N~l~~~~~~~~-------- 91 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLP--KLPKLKKLELSENRIFGGLDMLA-------- 91 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCC--CCSSCCEEEEESCCCCSCCCHHH--------
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhc--cCCCCCEEECcCCcCchHHHHHH--------
Confidence 44555555555554114455555555555555555555544 4444 66777777777777765554432
Q ss_pred eccCCCCCCccCCCccccccCCCccEEEccCCcccccC--CCCCCCCCCcEEeccCCccccccc---hhhhCCCCCcEEE
Q 002238 219 WVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPL--PDFSGVKQLESLSLRDNFFTGPVP---DSLVKLESLKIVN 293 (948)
Q Consensus 219 ~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~--~~~~~l~~L~~L~L~~N~l~~~~p---~~l~~l~~L~~L~ 293 (948)
.++++|++|+|++|++++.. +.+..+++|+.|+|++|.+++..+ ..+..+++|+.|+
T Consensus 92 ------------------~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~ 153 (168)
T 2ell_A 92 ------------------EKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLD 153 (168)
T ss_dssp ------------------HHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEET
T ss_pred ------------------hhCCCCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEec
Confidence 35677777777777777643 457778888888888888885444 4788888888888
Q ss_pred cccCccccc
Q 002238 294 MTNNLLQGP 302 (948)
Q Consensus 294 Ls~N~l~g~ 302 (948)
+++|.+...
T Consensus 154 l~~n~~~~~ 162 (168)
T 2ell_A 154 GYDREDQEA 162 (168)
T ss_dssp TEETTSCBC
T ss_pred CCCCChhhc
Confidence 888887643
No 383
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.55 E-value=3.5e-14 Score=140.78 Aligned_cols=133 Identities=21% Similarity=0.323 Sum_probs=111.0
Q ss_pred CcEEEcccCCCCCCCCCcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEccCCCCCCCCCCccccCCCCCCEEEccC
Q 002238 94 LERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANS 173 (948)
Q Consensus 94 L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~ 173 (948)
.+.+++++|+++..+..+. ++|++|+|++|+++++++..|..+++|++|+|++|+++. ..+..+..+++|++|+|++
T Consensus 9 ~~~l~~~~~~l~~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLTSVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQS-LPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCSSCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCC-CCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCccCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceE-eChhHccCCCccCEEECCC
Confidence 5789999999987665443 789999999999999999999999999999999999995 3345678999999999999
Q ss_pred ccccccCCCCCCCCCCCCCcEEEcccccccccCCCCcccccccceeccCCCCCCccCCCccccccCCCccEEEccCCccc
Q 002238 174 ANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFS 253 (948)
Q Consensus 174 n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~ 253 (948)
|+|++..+..|. .+++|++|+|++|++++..+..| .++++|++|+|++|.+.
T Consensus 86 N~l~~~~~~~~~--~l~~L~~L~l~~N~l~~~~~~~~--------------------------~~l~~L~~L~l~~N~~~ 137 (177)
T 2o6r_A 86 NKLQSLPNGVFD--KLTQLKELALDTNQLKSVPDGIF--------------------------DRLTSLQKIWLHTNPWD 137 (177)
T ss_dssp SCCCCCCTTTTT--TCTTCCEEECCSSCCSCCCTTTT--------------------------TTCTTCCEEECCSSCBC
T ss_pred CCccccCHHHhh--CCcccCEEECcCCcceEeCHHHh--------------------------cCCcccCEEEecCCCee
Confidence 999988888776 89999999999999985544333 36778888888888777
Q ss_pred ccCC
Q 002238 254 GPLP 257 (948)
Q Consensus 254 ~~~~ 257 (948)
+..+
T Consensus 138 ~~~~ 141 (177)
T 2o6r_A 138 CSCP 141 (177)
T ss_dssp CCHH
T ss_pred ccCc
Confidence 6443
No 384
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.54 E-value=4e-15 Score=163.56 Aligned_cols=103 Identities=14% Similarity=0.134 Sum_probs=73.6
Q ss_pred CCCCcEEeccCCccccccchhhhCCCCCcEEEcccCcccccCCCCCCccccccccccCCCCCCCCCCCchhhhhhHHHHH
Q 002238 262 VKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVK 341 (948)
Q Consensus 262 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 341 (948)
+++|+.|+|++|+++...+..|.++++|+.|+|.+| ++. ++.
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~-I~~------------------------------------ 266 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKT-IGQ------------------------------------ 266 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCE-ECT------------------------------------
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cce-ehH------------------------------------
Confidence 567777777777777555566777777777777776 442 221
Q ss_pred hhCCcchhccccCCCCCCCCccceeecCCceE-EEEccCCcccccCCccccCccccceEeCccccccccCCcCCcCCCCC
Q 002238 342 LMGYPQRFAENWKGNDPCSDWIGVTCTKGNIT-VINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGAL 420 (948)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~-~L~ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L 420 (948)
+.|..+.+|+ .|++.+ +++..-+.+|.++++|+.|+|++|+++..-+..|.++++|
T Consensus 267 ----------------------~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L 323 (329)
T 3sb4_A 267 ----------------------RVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPS 323 (329)
T ss_dssp ----------------------TTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCC
T ss_pred ----------------------HHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcch
Confidence 1233445677 788877 6776667788888888888888888886667788888888
Q ss_pred cEEEc
Q 002238 421 KELDV 425 (948)
Q Consensus 421 ~~L~l 425 (948)
+.++.
T Consensus 324 ~~ly~ 328 (329)
T 3sb4_A 324 KLIYK 328 (329)
T ss_dssp CEEEC
T ss_pred hhhcc
Confidence 88763
No 385
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.54 E-value=5.8e-14 Score=141.09 Aligned_cols=82 Identities=24% Similarity=0.344 Sum_probs=38.8
Q ss_pred EEEcccccccCCCCccccCCCCCCEEEccCCCCCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcc
Q 002238 119 VVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLA 198 (948)
Q Consensus 119 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls 198 (948)
++++++|.++.++... .++|++|+|++|+|+ .+|..+.++++|+.|+|++|+|++..+..|. .+++|++|+|+
T Consensus 14 ~l~~~~~~l~~ip~~~---~~~l~~L~L~~n~i~--~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~--~l~~L~~L~Ls 86 (193)
T 2wfh_A 14 VVRCSNKGLKVLPKGI---PRDVTELYLDGNQFT--LVPKELSNYKHLTLIDLSNNRISTLSNQSFS--NMTQLLTLILS 86 (193)
T ss_dssp EEECTTSCCSSCCSCC---CTTCCEEECCSSCCC--SCCGGGGGCTTCCEEECCSSCCCCCCTTTTT--TCTTCCEEECC
T ss_pred EEEcCCCCCCcCCCCC---CCCCCEEECCCCcCc--hhHHHhhcccCCCEEECCCCcCCEeCHhHcc--CCCCCCEEECC
Confidence 3444444444443321 134555555555554 3444455555555555555555544444444 45555555555
Q ss_pred cccccccCC
Q 002238 199 FNQLIGGLP 207 (948)
Q Consensus 199 ~N~l~~~~p 207 (948)
+|+|++..|
T Consensus 87 ~N~l~~i~~ 95 (193)
T 2wfh_A 87 YNRLRCIPP 95 (193)
T ss_dssp SSCCCBCCT
T ss_pred CCccCEeCH
Confidence 555543333
No 386
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.53 E-value=9.6e-15 Score=140.35 Aligned_cols=127 Identities=17% Similarity=0.187 Sum_probs=77.0
Q ss_pred CCCcEEEccccccc-CCCCccccCCCCCCEEEccCCCCCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCc
Q 002238 115 ASLEVVMLSNNQFT-SVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLT 193 (948)
Q Consensus 115 ~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~ 193 (948)
++|++|+|++|.++ +..|..+..+++|+.|+|++|+++ +. ..+. .+++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~-------------------------~~--~~~~--~l~~L~ 67 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLT-------------------------SI--ANLP--KLNKLK 67 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCC-------------------------CC--TTCC--CCTTCC
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCC-------------------------Cc--hhhh--cCCCCC
Confidence 44555555555555 333444455555555555555554 33 3333 566666
Q ss_pred EEEcccccccccCCCCcccccccceeccCCCCCCccCCCccccccCCCccEEEccCCcccccC--CCCCCCCCCcEEecc
Q 002238 194 ILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPL--PDFSGVKQLESLSLR 271 (948)
Q Consensus 194 ~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~--~~~~~l~~L~~L~L~ 271 (948)
+|+|++|++++.+|.. +.++++|++|+|++|++++.. ..+..+++|+.|+++
T Consensus 68 ~L~Ls~n~i~~~~~~~--------------------------~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~ 121 (149)
T 2je0_A 68 KLELSDNRVSGGLEVL--------------------------AEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLF 121 (149)
T ss_dssp EEECCSSCCCSCTHHH--------------------------HHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEECT
T ss_pred EEECCCCcccchHHHH--------------------------hhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEeCc
Confidence 6666666666544433 234667777777777776632 456677778888888
Q ss_pred CCccccccc---hhhhCCCCCcEEEccc
Q 002238 272 DNFFTGPVP---DSLVKLESLKIVNMTN 296 (948)
Q Consensus 272 ~N~l~~~~p---~~l~~l~~L~~L~Ls~ 296 (948)
+|.+++..+ ..+..+++|+.|++++
T Consensus 122 ~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 122 NCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp TCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCcccchHHHHHHHHHHCCCcccccCCC
Confidence 888875554 4677888888887763
No 387
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.49 E-value=3.1e-14 Score=141.03 Aligned_cols=131 Identities=15% Similarity=0.241 Sum_probs=114.4
Q ss_pred CCCCEEEEEeCCCCCcCCCCccccCCC-CCcEEEcccCCCCCCCCCcCCCCCCcEEEcccccccCCCCccccCCCCCCEE
Q 002238 66 EDKRITRIQIGHQNLQGTLPSNLQNLT-KLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSI 144 (948)
Q Consensus 66 ~~~~v~~l~l~~~~l~~~~p~~l~~l~-~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 144 (948)
+..+++.|++++|+++ .+|. +..+. +|++|+|++|.|++. +.|.++++|++|+|++|+|+++++..|..+++|++|
T Consensus 17 ~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 93 (176)
T 1a9n_A 17 NAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTEL 93 (176)
T ss_dssp CTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEE
T ss_pred CcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc-cccccCCCCCEEECCCCcccccCcchhhcCCCCCEE
Confidence 3458999999999999 4554 55555 999999999999987 789999999999999999999998888999999999
Q ss_pred EccCCCCCCCCCCc--cccCCCCCCEEEccCccccccCCCC----CCCCCCCCCcEEEcccccccc
Q 002238 145 EIDNNPFSSWEIPQ--SLRNASGLQNFSANSANITGQIPSF----FGPDEFPGLTILHLAFNQLIG 204 (948)
Q Consensus 145 ~Ls~N~l~~~~~p~--~~~~l~~L~~L~l~~n~l~~~~p~~----~~~~~l~~L~~L~Ls~N~l~~ 204 (948)
+|++|+|+ .+|. .+..+++|+.|++++|.++. +|.. +. .+++|++||+++|.+..
T Consensus 94 ~L~~N~i~--~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~--~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 94 ILTNNSLV--ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIY--KVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp ECCSCCCC--CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHH--HCTTCSEETTEECCHHH
T ss_pred ECCCCcCC--cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHH--HCCccceeCCCcCCHHH
Confidence 99999997 5676 89999999999999999984 4553 65 79999999999998764
No 388
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.47 E-value=7.6e-14 Score=138.19 Aligned_cols=134 Identities=14% Similarity=0.134 Sum_probs=91.3
Q ss_pred ccCCCCCCEEEccCCCCCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccccCCCCccccc
Q 002238 135 FTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQ 214 (948)
Q Consensus 135 ~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~ 214 (948)
+.++++|+.|+|++|+++ .+|......++|++|++++|.|++. ..+. .+++|++|+|++|++++..+..
T Consensus 15 ~~~~~~L~~L~l~~n~l~--~i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~--~l~~L~~L~Ls~N~l~~~~~~~----- 83 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIP--VIENLGATLDQFDAIDFSDNEIRKL--DGFP--LLRRLKTLLVNNNRICRIGEGL----- 83 (176)
T ss_dssp EECTTSCEEEECTTSCCC--SCCCGGGGTTCCSEEECCSSCCCEE--CCCC--CCSSCCEEECCSSCCCEECSCH-----
T ss_pred cCCcCCceEEEeeCCCCc--hhHHhhhcCCCCCEEECCCCCCCcc--cccc--cCCCCCEEECCCCcccccCcch-----
Confidence 445566666666666665 3343222233666666666666654 3444 6777888888888877443322
Q ss_pred ccceeccCCCCCCccCCCccccccCCCccEEEccCCcccccCC--CCCCCCCCcEEeccCCccccccchh----hhCCCC
Q 002238 215 IQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP--DFSGVKQLESLSLRDNFFTGPVPDS----LVKLES 288 (948)
Q Consensus 215 l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~--~~~~l~~L~~L~L~~N~l~~~~p~~----l~~l~~ 288 (948)
+..+++|++|+|++|+++..++ .+..+++|+.|+|++|.++ .+|.. +..+++
T Consensus 84 ---------------------~~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~ 141 (176)
T 1a9n_A 84 ---------------------DQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQ 141 (176)
T ss_dssp ---------------------HHHCTTCCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTT
T ss_pred ---------------------hhcCCCCCEEECCCCcCCcchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCc
Confidence 2467788888888888865444 5777888999999999988 56664 889999
Q ss_pred CcEEEcccCcccc
Q 002238 289 LKIVNMTNNLLQG 301 (948)
Q Consensus 289 L~~L~Ls~N~l~g 301 (948)
|+.||+++|.+..
T Consensus 142 L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 142 VRVLDFQKVKLKE 154 (176)
T ss_dssp CSEETTEECCHHH
T ss_pred cceeCCCcCCHHH
Confidence 9999999998763
No 389
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.47 E-value=1.6e-12 Score=145.98 Aligned_cols=170 Identities=16% Similarity=0.136 Sum_probs=100.4
Q ss_pred CCCcEEEcccCCCCCCCC-CcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEccCCCCCCCCCCccccCCCCCCEEE
Q 002238 92 TKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFS 170 (948)
Q Consensus 92 ~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~ 170 (948)
..++.+.+.+ .++.+.+ +|.+. +|+.+.|.+| ++.+...+|.+. +|+.+.|.+ .++. --+.+|.++++|+.++
T Consensus 113 ~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~-I~~~aF~~c~~L~~l~ 186 (401)
T 4fdw_A 113 KGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQ-LKEDIFYYCYNLKKAD 186 (401)
T ss_dssp SSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCE-ECSSTTTTCTTCCEEE
T ss_pred CCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccE-ehHHHhhCcccCCeee
Confidence 5566666643 3444333 56653 6777777665 666667777763 577777765 4542 1235667777777777
Q ss_pred ccCccccccCCCCCCCCCCCCCcEEEcccccccccCCCCcccccccceeccCCCCCCccCCCccccccCCCccEEEccCC
Q 002238 171 ANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSN 250 (948)
Q Consensus 171 l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N 250 (948)
+.+|+++......|. ..+|+.+.|..| +...-..+ |.++++|+.|+|..|
T Consensus 187 l~~n~l~~I~~~aF~---~~~L~~l~lp~~-l~~I~~~a--------------------------F~~~~~L~~l~l~~~ 236 (401)
T 4fdw_A 187 LSKTKITKLPASTFV---YAGIEEVLLPVT-LKEIGSQA--------------------------FLKTSQLKTIEIPEN 236 (401)
T ss_dssp CTTSCCSEECTTTTT---TCCCSEEECCTT-CCEECTTT--------------------------TTTCTTCCCEECCTT
T ss_pred cCCCcceEechhhEe---ecccCEEEeCCc-hheehhhH--------------------------hhCCCCCCEEecCCC
Confidence 777777766666663 467777777644 44333333 335666666666654
Q ss_pred cccccCC-CCCCCCCCcEEeccCCccccccchhhhCCCCCcEEEcccCccc
Q 002238 251 AFSGPLP-DFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQ 300 (948)
Q Consensus 251 ~l~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 300 (948)
++.... .|.+ .+|+.+.| .|.++..-..+|.++++|+.+++.+|.+.
T Consensus 237 -l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~ 284 (401)
T 4fdw_A 237 -VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFN 284 (401)
T ss_dssp -CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCC
T ss_pred -ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCcccc
Confidence 332222 3444 56666666 34455344566666677777776666553
No 390
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.45 E-value=6.5e-16 Score=156.38 Aligned_cols=149 Identities=17% Similarity=0.267 Sum_probs=95.1
Q ss_pred CCcEEEcccccccCCCCc------cccCCCCCCEEEccCCCCCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCC
Q 002238 116 SLEVVMLSNNQFTSVPSD------FFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEF 189 (948)
Q Consensus 116 ~L~~L~L~~N~l~~~~~~------~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l 189 (948)
.++.++|+.|.+++..|. .|..+++|++|+|++|+++. +| .+.++++|++|++++|+++ .+|..+. .+
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~--l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~ 92 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK--IS-SLSGMENLRILSLGRNLIK-KIENLDA--VA 92 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC--CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH--HH
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc--cc-ccccCCCCCEEECCCCCcc-cccchhh--cC
Confidence 344444444444443333 56666666666666666663 45 6666666666666666666 3454443 45
Q ss_pred CCCcEEEcccccccccCCCCcccccccceeccCCCCCCccCCCccccccCCCccEEEccCCcccccCC--CCCCCCCCcE
Q 002238 190 PGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP--DFSGVKQLES 267 (948)
Q Consensus 190 ~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~--~~~~l~~L~~ 267 (948)
++|++|+|++|++++ +| . +.++++|+.|+|++|++++..+ .+..+++|+.
T Consensus 93 ~~L~~L~L~~N~l~~-l~-~--------------------------~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~ 144 (198)
T 1ds9_A 93 DTLEELWISYNQIAS-LS-G--------------------------IEKLVNLRVLYMSNNKITNWGEIDKLAALDKLED 144 (198)
T ss_dssp HHCSEEEEEEEECCC-HH-H--------------------------HHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSE
T ss_pred CcCCEEECcCCcCCc-CC-c--------------------------cccCCCCCEEECCCCcCCchhHHHHHhcCCCCCE
Confidence 677777777777764 22 1 3356778888888887775332 4667788888
Q ss_pred EeccCCccccccchh----------hhCCCCCcEEEcccCccc
Q 002238 268 LSLRDNFFTGPVPDS----------LVKLESLKIVNMTNNLLQ 300 (948)
Q Consensus 268 L~L~~N~l~~~~p~~----------l~~l~~L~~L~Ls~N~l~ 300 (948)
|++++|.+.+.+|.. +..+++|+.|| +|.++
T Consensus 145 L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 145 LLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp EEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred EEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 888888887666653 78888899886 66665
No 391
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.41 E-value=9.4e-13 Score=129.32 Aligned_cols=102 Identities=23% Similarity=0.327 Sum_probs=60.6
Q ss_pred EEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEccCCC
Q 002238 72 RIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNP 150 (948)
Q Consensus 72 ~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 150 (948)
.+++++|+++ .+|..+. ++|++|+|++|+|++..| .|.++++|++|+|++|+|+++++..|..+++|++|+|++|+
T Consensus 13 ~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~ 89 (170)
T 3g39_A 13 TVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQ 89 (170)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCc
Confidence 4666666666 4555543 667777777777776655 46666677777777777766666666666666666666666
Q ss_pred CCCCCCCccccCCCCCCEEEccCcccc
Q 002238 151 FSSWEIPQSLRNASGLQNFSANSANIT 177 (948)
Q Consensus 151 l~~~~~p~~~~~l~~L~~L~l~~n~l~ 177 (948)
|+. ..+..+..+++|++|+|++|.++
T Consensus 90 l~~-~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 90 LKS-IPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp CCC-CCTTTTTTCTTCCEEECCSSCBC
T ss_pred cCE-eCHHHhcCCCCCCEEEeCCCCCC
Confidence 663 11223444444444444444443
No 392
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.40 E-value=1.1e-15 Score=154.64 Aligned_cols=161 Identities=20% Similarity=0.272 Sum_probs=127.4
Q ss_pred CCEEEEEeCCCCCcCCCCc------cccCCCCCcEEEcccCCCCCCCCCcCCCCCCcEEEcccccccCCCCccccCCCCC
Q 002238 68 KRITRIQIGHQNLQGTLPS------NLQNLTKLERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSL 141 (948)
Q Consensus 68 ~~v~~l~l~~~~l~~~~p~------~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 141 (948)
.+++.++++.+++.|.+|. .+.++++|++|+|++|.|++. |.+.++++|++|+|++|.++.++ ..+..+++|
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~l-~~~~~l~~L~~L~l~~n~l~~l~-~~~~~~~~L 95 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEKI-SSLSGMENLRILSLGRNLIKKIE-NLDAVADTL 95 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESCC-CCHHHHTTCCEEEEEEEEECSCS-SHHHHHHHC
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCccc-cccccCCCCCEEECCCCCccccc-chhhcCCcC
Confidence 3566677777778777776 899999999999999999984 58999999999999999999764 567888999
Q ss_pred CEEEccCCCCCCCCCCccccCCCCCCEEEccCccccccCC-CCCCCCCCCCCcEEEcccccccccCCCCcccccccceec
Q 002238 142 QSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIP-SFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWV 220 (948)
Q Consensus 142 ~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p-~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~ 220 (948)
+.|+|++|++++ +| .+..+++|++|++++|++++..+ ..+. .+++|++|+|++|++.+.+|..-.
T Consensus 96 ~~L~L~~N~l~~--l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~--~l~~L~~L~l~~N~l~~~~~~~~~--------- 161 (198)
T 1ds9_A 96 EELWISYNQIAS--LS-GIEKLVNLRVLYMSNNKITNWGEIDKLA--ALDKLEDLLLAGNPLYNDYKENNA--------- 161 (198)
T ss_dssp SEEEEEEEECCC--HH-HHHHHHHSSEEEESEEECCCHHHHHHHT--TTTTCSEEEECSCHHHHHHHTTTT---------
T ss_pred CEEECcCCcCCc--CC-ccccCCCCCEEECCCCcCCchhHHHHHh--cCCCCCEEEecCCccccccccccc---------
Confidence 999999999994 56 68899999999999999986543 4555 799999999999999877664200
Q ss_pred cCCCCCCccCCCccccccCCCccEEEccCCccc
Q 002238 221 NGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFS 253 (948)
Q Consensus 221 ~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~ 253 (948)
........+..+++|+.|| +|.++
T Consensus 162 -------~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 162 -------TSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp -------HHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred -------hHHHHHHHHHhCCCcEEEC--CcccC
Confidence 0000012245788888886 66665
No 393
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.39 E-value=8.6e-13 Score=144.85 Aligned_cols=99 Identities=20% Similarity=0.177 Sum_probs=63.4
Q ss_pred CCCCcEEEcccccccccCCCCcccccccceeccCCCCCCccCCCccccccCCCccEEEccCCcccccCC-CCCCCCCCc-
Q 002238 189 FPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-DFSGVKQLE- 266 (948)
Q Consensus 189 l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~- 266 (948)
+++|+.|+|++|+++...+..| .++++|+.|+|.+| ++...+ .|.++.+|+
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF--------------------------~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~ 277 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTF--------------------------AQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAG 277 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTT--------------------------TTCTTCCEEECCTT-CCEECTTTTTTCTTCCE
T ss_pred cCCCeEEECCCCCcceecHhhh--------------------------hCCCCCCEEECCcc-cceehHHHhhCChhccE
Confidence 5678888888888774444443 36677777777776 554333 466777777
Q ss_pred EEeccCCccccccchhhhCCCCCcEEEcccCcccccCCC-CCCccccccc
Q 002238 267 SLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPE-FDRSVSLDMA 315 (948)
Q Consensus 267 ~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~~~l~~~ 315 (948)
.|+|.+ .++..-+.+|.++++|+.|++++|+++...+. |.++.+|+.+
T Consensus 278 ~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~l 326 (329)
T 3sb4_A 278 TLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLI 326 (329)
T ss_dssp EEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEE
T ss_pred EEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhh
Confidence 777776 56545556777777777777777777655443 4555555443
No 394
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.37 E-value=2.5e-12 Score=126.23 Aligned_cols=109 Identities=18% Similarity=0.239 Sum_probs=97.2
Q ss_pred CcEEEcccCCCCCCCCCcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEccCCCCCCCCCCccccCCCCCCEEEccC
Q 002238 94 LERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANS 173 (948)
Q Consensus 94 L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~ 173 (948)
.+.|++++|.|+.++..+. ++|++|+|++|+|+++++..|.++++|++|+|++|+|+. ..+..|.++++|++|+|++
T Consensus 11 ~~~l~~s~n~l~~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLASVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTV-LPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCC-CCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCc-cChhhccCCCCCCEEECCC
Confidence 5789999999998665553 889999999999999999999999999999999999995 3345678999999999999
Q ss_pred ccccccCCCCCCCCCCCCCcEEEcccccccccCC
Q 002238 174 ANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLP 207 (948)
Q Consensus 174 n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p 207 (948)
|+|++..+..|. .+++|++|+|++|++++..+
T Consensus 88 N~l~~~~~~~~~--~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 88 NQLKSIPRGAFD--NLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SCCCCCCTTTTT--TCTTCCEEECCSSCBCTTBG
T ss_pred CccCEeCHHHhc--CCCCCCEEEeCCCCCCCCch
Confidence 999988888887 89999999999999986554
No 395
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.37 E-value=2.6e-12 Score=126.57 Aligned_cols=102 Identities=24% Similarity=0.436 Sum_probs=66.5
Q ss_pred EEEEeCCCCCcCCCCccccCCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEccCC
Q 002238 71 TRIQIGHQNLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNN 149 (948)
Q Consensus 71 ~~l~l~~~~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 149 (948)
+.+++++++++ .+|..+. ++|++|+|++|+|++.+| .|.++++|++|+|++|+|+++++..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 46777777775 6666554 677777777777777666 5667777777777777777777766677777777777777
Q ss_pred CCCCCCCCc-cccCCCCCCEEEccCcccc
Q 002238 150 PFSSWEIPQ-SLRNASGLQNFSANSANIT 177 (948)
Q Consensus 150 ~l~~~~~p~-~~~~l~~L~~L~l~~n~l~ 177 (948)
+|+. +|. .+..+++|++|+|++|.+.
T Consensus 92 ~l~~--l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKS--IPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCC--CCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccce--eCHHHhccccCCCEEEeCCCCcc
Confidence 7663 332 2444444444444444443
No 396
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.36 E-value=3.2e-12 Score=125.88 Aligned_cols=106 Identities=19% Similarity=0.235 Sum_probs=94.9
Q ss_pred CcEEEcccCCCCCCCCCcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEccCCCCCCCCCCc-cccCCCCCCEEEcc
Q 002238 94 LERLELQWNSISGPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQ-SLRNASGLQNFSAN 172 (948)
Q Consensus 94 L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~-~~~~l~~L~~L~l~ 172 (948)
-+.+++++|+|+.+++.+. ++|++|+|++|+|++++|..|.++++|+.|+|++|+|++ +|. .|.++++|++|+|+
T Consensus 14 ~~~l~~~~n~l~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--i~~~~~~~l~~L~~L~L~ 89 (174)
T 2r9u_A 14 QTLVNCQNIRLASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTA--IPTGVFDKLTQLTQLDLN 89 (174)
T ss_dssp SSEEECCSSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC--CCTTTTTTCTTCCEEECC
T ss_pred CcEEEeCCCCCCccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCc--cChhHhCCcchhhEEECC
Confidence 3689999999987666564 899999999999999999999999999999999999995 555 46899999999999
Q ss_pred CccccccCCCCCCCCCCCCCcEEEccccccccc
Q 002238 173 SANITGQIPSFFGPDEFPGLTILHLAFNQLIGG 205 (948)
Q Consensus 173 ~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~ 205 (948)
+|+|++..+..|. .+++|++|+|++|++...
T Consensus 90 ~N~l~~l~~~~~~--~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 90 DNHLKSIPRGAFD--NLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp SSCCCCCCTTTTT--TCTTCSEEECCSSCBCTT
T ss_pred CCccceeCHHHhc--cccCCCEEEeCCCCcccc
Confidence 9999988777787 899999999999999854
No 397
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.32 E-value=3.3e-11 Score=135.16 Aligned_cols=253 Identities=10% Similarity=0.146 Sum_probs=186.4
Q ss_pred CCcCCCCccccCCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEccCCCCCCCCCC
Q 002238 79 NLQGTLPSNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIP 157 (948)
Q Consensus 79 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p 157 (948)
+++..-..+|.+ .+|+.++|..| ++.+.. +|.+ .+|+.+.|.+ .++.+...+|.++++|+.++|++|+++ .++
T Consensus 123 ~i~~I~~~aF~~-~~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~--~I~ 196 (401)
T 4fdw_A 123 SVKSIPKDAFRN-SQIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKIT--KLP 196 (401)
T ss_dssp TCCEECTTTTTT-CCCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCS--EEC
T ss_pred ccCEehHhhccc-CCccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcce--Eec
Confidence 344333456777 48999999776 666555 6877 4799999996 889999999999999999999999999 577
Q ss_pred ccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccccCCCCcccccccceeccCCCCCCccCCCccccc
Q 002238 158 QSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQ 237 (948)
Q Consensus 158 ~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~ 237 (948)
.......+|+.+.|.+ +++.....+|. .+++|+.++|..| ++..-..+|.
T Consensus 197 ~~aF~~~~L~~l~lp~-~l~~I~~~aF~--~~~~L~~l~l~~~-l~~I~~~aF~-------------------------- 246 (401)
T 4fdw_A 197 ASTFVYAGIEEVLLPV-TLKEIGSQAFL--KTSQLKTIEIPEN-VSTIGQEAFR-------------------------- 246 (401)
T ss_dssp TTTTTTCCCSEEECCT-TCCEECTTTTT--TCTTCCCEECCTT-CCEECTTTTT--------------------------
T ss_pred hhhEeecccCEEEeCC-chheehhhHhh--CCCCCCEEecCCC-ccCccccccc--------------------------
Confidence 6666679999999985 48877778887 8999999999876 5544444443
Q ss_pred cCCCccEEEccCCcccccCC-CCCCCCCCcEEeccCCccc-----cccchhhhCCCCCcEEEcccCcccccCCCCCCccc
Q 002238 238 NMTSLKEIWLHSNAFSGPLP-DFSGVKQLESLSLRDNFFT-----GPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVS 311 (948)
Q Consensus 238 ~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~L~~N~l~-----~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~ 311 (948)
+ .+|+.+.| .|.++.... .|.++++|+.+.+.+|.+. ...+.+|.++++|+.++|.+ .++. ++.
T Consensus 247 ~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~-I~~------ 316 (401)
T 4fdw_A 247 E-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRI-LGQ------ 316 (401)
T ss_dssp T-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCE-ECT------
T ss_pred c-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEE-Ehh------
Confidence 3 56777777 344554433 5777888888888777664 35567788888888888873 3432 111
Q ss_pred cccccccCCCCCCCCCCCchhhhhhHHHHHhhCCcchhccccCCCCCCCCccceeecCCceEEEEccCCcccccCCcccc
Q 002238 312 LDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFA 391 (948)
Q Consensus 312 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~g~ip~~~~ 391 (948)
+.|..+.+|+.|+|.+| ++..-+.+|.
T Consensus 317 ----------------------------------------------------~aF~~c~~L~~l~lp~~-l~~I~~~aF~ 343 (401)
T 4fdw_A 317 ----------------------------------------------------GLLGGNRKVTQLTIPAN-VTQINFSAFN 343 (401)
T ss_dssp ----------------------------------------------------TTTTTCCSCCEEEECTT-CCEECTTSSS
T ss_pred ----------------------------------------------------hhhcCCCCccEEEECcc-ccEEcHHhCC
Confidence 12334456777888544 6666677888
Q ss_pred CccccceEeCccccccccCCcCCcCCC-CCcEEEccCCccc
Q 002238 392 SFKSLQRLILADNNLSGMIPEGLSVLG-ALKELDVSNNQLY 431 (948)
Q Consensus 392 ~l~~L~~L~Ls~N~l~g~ip~~l~~l~-~L~~L~ls~N~l~ 431 (948)
++ +|+.|++++|.+....+..|.+++ ++..|.+..|.+.
T Consensus 344 ~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 344 NT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp SS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred CC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 88 999999999988866677788884 7888988887654
No 398
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.23 E-value=3.1e-11 Score=127.78 Aligned_cols=146 Identities=14% Similarity=0.074 Sum_probs=113.7
Q ss_pred HHhhcCCcccceecccCceEEEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcC-CCceeeEEeEEEeCCceE
Q 002238 589 RNVTNNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR-HRHLVALLGHCLDGNEKL 667 (948)
Q Consensus 589 ~~~~~~~~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~ 667 (948)
......|+....++.|+++.||++... ++.+++|+...... .....+.+|+++++.+. |..+.++++++.+.+..|
T Consensus 10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~--~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~ 86 (263)
T 3tm0_A 10 KKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYK--GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSN 86 (263)
T ss_dssp HHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGT--TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEE
T ss_pred HHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccC--CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceE
Confidence 344567888888999999999999855 78999999865311 22346899999999994 677889999998888899
Q ss_pred EEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcc-------------------------------
Q 002238 668 LVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLA------------------------------- 716 (948)
Q Consensus 668 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------------------------------- 716 (948)
+||||++|.+|.+.+. +......++.+++++++.||+..
T Consensus 87 lv~e~i~G~~l~~~~~----------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (263)
T 3tm0_A 87 LLMSEADGVLCSEEYE----------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCE 156 (263)
T ss_dssp EEEECCSSEEHHHHCC----------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGG
T ss_pred EEEEecCCeehhhccC----------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccc
Confidence 9999999999876531 01123467889999999999721
Q ss_pred -------------------------CCCeeecCCCCccEEEcCCCCeEEeecCCce
Q 002238 717 -------------------------HQSFIHRDLKPSNILLGDDMRAKVADFGLVR 747 (948)
Q Consensus 717 -------------------------~~~ivHrDik~~Nill~~~~~~kl~DfGla~ 747 (948)
...++|+|+++.||+++++..+.|+||+.+.
T Consensus 157 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 157 NWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp GGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1458999999999999876566799998654
No 399
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.23 E-value=2e-11 Score=135.10 Aligned_cols=84 Identities=19% Similarity=0.256 Sum_probs=62.8
Q ss_pred CCccceEEeCCCCEEEEEeCCC-CCcCCCCccccCCCCCcEEEccc-CCCCCCCC-CcCCCCCCcEEEcccccccCCCCc
Q 002238 57 CKWNHVVCIEDKRITRIQIGHQ-NLQGTLPSNLQNLTKLERLELQW-NSISGPLP-SLNGLASLEVVMLSNNQFTSVPSD 133 (948)
Q Consensus 57 C~w~gv~c~~~~~v~~l~l~~~-~l~~~~p~~l~~l~~L~~L~L~~-N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~ 133 (948)
|.|..|.|. ++ +|+ .+|. |..+++|++|+|++ |.|+++++ .|.+|++|++|+|++|+|++++|.
T Consensus 8 C~~~~v~~~-----------~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 74 (347)
T 2ifg_A 8 HGSSGLRCT-----------RDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPD 74 (347)
T ss_dssp SSSSCEECC-----------SSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTT
T ss_pred ccCCEEEcC-----------CCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHH
Confidence 666666553 34 566 4777 88888888888885 88887766 577788888888888888888777
Q ss_pred cccCCCCCCEEEccCCCCCC
Q 002238 134 FFTGLSSLQSIEIDNNPFSS 153 (948)
Q Consensus 134 ~~~~l~~L~~L~Ls~N~l~~ 153 (948)
.|.+|++|+.|+|++|+|++
T Consensus 75 ~~~~l~~L~~L~l~~N~l~~ 94 (347)
T 2ifg_A 75 AFHFTPRLSRLNLSFNALES 94 (347)
T ss_dssp GGGSCSCCCEEECCSSCCSC
T ss_pred HhcCCcCCCEEeCCCCccce
Confidence 77777777777777777773
No 400
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.17 E-value=5.4e-11 Score=131.61 Aligned_cols=106 Identities=15% Similarity=0.168 Sum_probs=94.9
Q ss_pred cEEEcccC-CCCCCCCCcCCCCCCcEEEccc-ccccCCCCccccCCCCCCEEEccCCCCCCCCCCccccCCCCCCEEEcc
Q 002238 95 ERLELQWN-SISGPLPSLNGLASLEVVMLSN-NQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSAN 172 (948)
Q Consensus 95 ~~L~L~~N-~l~~~~p~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~ 172 (948)
..++++++ +|+.+++ +..+++|++|+|++ |+|+++++..|.+|++|+.|+|++|+|++ ..|..|.++++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALDSLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRF-VAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCTTTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCE-ECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCCccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccce-eCHHHhcCCcCCCEEeCC
Confidence 35789888 8998776 99999999999996 99999999999999999999999999997 557789999999999999
Q ss_pred CccccccCCCCCCCCCCCCCcEEEccccccccc
Q 002238 173 SANITGQIPSFFGPDEFPGLTILHLAFNQLIGG 205 (948)
Q Consensus 173 ~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~ 205 (948)
+|+|++..+..|. .++ |+.|+|++|++...
T Consensus 89 ~N~l~~~~~~~~~--~~~-L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 89 FNALESLSWKTVQ--GLS-LQELVLSGNPLHCS 118 (347)
T ss_dssp SSCCSCCCSTTTC--SCC-CCEEECCSSCCCCC
T ss_pred CCccceeCHHHcc--cCC-ceEEEeeCCCccCC
Confidence 9999988877775 454 99999999999853
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.17 E-value=3.9e-13 Score=149.43 Aligned_cols=165 Identities=15% Similarity=0.135 Sum_probs=98.1
Q ss_pred CCCcEEEcccccccCCCCccccC-----CCCCCEEEccCCCCCCCCCCccccCCCCCCEEEccCccccccCCCCCCC---
Q 002238 115 ASLEVVMLSNNQFTSVPSDFFTG-----LSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGP--- 186 (948)
Q Consensus 115 ~~L~~L~L~~N~l~~~~~~~~~~-----l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~--- 186 (948)
+.|++|+|++|.|+......|.. .++|+.|+|++|.++...+..-...+++|+.|+|++|+|+......+..
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 44555666665555433332222 2566666666666653111122223456666777777665443333210
Q ss_pred CCCCCCcEEEcccccccccCCCCcccccccceeccCCCCCCccCCCccccccCCCccEEEccCCcccccC-----CCCCC
Q 002238 187 DEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPL-----PDFSG 261 (948)
Q Consensus 187 ~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~-----~~~~~ 261 (948)
...++|++|+|++|.|+..-...+ ...+..+++|++|+|++|.++... ..+..
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l----------------------~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~ 209 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVL----------------------MEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDR 209 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHH----------------------HHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGG
T ss_pred hcCCccceeeCCCCCCChHHHHHH----------------------HHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhc
Confidence 134678888888887764222111 122346778888888888887522 23556
Q ss_pred CCCCcEEeccCCcccc----ccchhhhCCCCCcEEEcccCcccc
Q 002238 262 VKQLESLSLRDNFFTG----PVPDSLVKLESLKIVNMTNNLLQG 301 (948)
Q Consensus 262 l~~L~~L~L~~N~l~~----~~p~~l~~l~~L~~L~Ls~N~l~g 301 (948)
.++|+.|+|++|.|+. .++..+...++|++|+|++|.|+.
T Consensus 210 ~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 210 NRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp CSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCH
T ss_pred CCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCH
Confidence 6789999999998874 344556677899999999998864
No 402
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.11 E-value=8.5e-11 Score=124.23 Aligned_cols=137 Identities=18% Similarity=0.149 Sum_probs=100.2
Q ss_pred cCCcccceecccCceEEEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCc--eeeEEeEEEeCCceEEEE
Q 002238 593 NNFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRH--LVALLGHCLDGNEKLLVF 670 (948)
Q Consensus 593 ~~~~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~~~~~~~~~~~lv~ 670 (948)
..+....+.+.|..+.||++...+|+.++||+.... ....+.+|+++++.+.+.+ +.+++++...++..++||
T Consensus 20 ~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~-----~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~ 94 (264)
T 1nd4_A 20 FGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG-----ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLL 94 (264)
T ss_dssp TTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC-----TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEE
T ss_pred CCCceEecccCCCCceEEEEecCCCCeEEEEeCCcc-----cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEE
Confidence 344443333466679999998777888999987542 2245789999999995544 456888888878889999
Q ss_pred EecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcc----------------------------------
Q 002238 671 EYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLA---------------------------------- 716 (948)
Q Consensus 671 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---------------------------------- 716 (948)
||++|.++. .. ..+ ...++.++++.++.||+..
T Consensus 95 e~i~G~~l~--~~--------~~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (264)
T 1nd4_A 95 GEVPGQDLL--SS--------HLA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEE 161 (264)
T ss_dssp ECCSSEETT--TS--------CCC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGG
T ss_pred EecCCcccC--cC--------cCC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhh
Confidence 999998884 20 111 2256777888888888631
Q ss_pred ---------------------CCCeeecCCCCccEEEcCCCCeEEeecCCce
Q 002238 717 ---------------------HQSFIHRDLKPSNILLGDDMRAKVADFGLVR 747 (948)
Q Consensus 717 ---------------------~~~ivHrDik~~Nill~~~~~~kl~DfGla~ 747 (948)
...++|+|++|.||+++.++.+.|+|||.+.
T Consensus 162 ~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 162 HQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp GTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred ccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1139999999999999877667799999765
No 403
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.09 E-value=7.1e-13 Score=147.32 Aligned_cols=161 Identities=14% Similarity=0.109 Sum_probs=78.0
Q ss_pred CCCcEEEcccccccCCCCcc-ccCCCCCCEEEccCCCCCCCCCCccc-----cCCCCCCEEEccCcccccc----CCCCC
Q 002238 115 ASLEVVMLSNNQFTSVPSDF-FTGLSSLQSIEIDNNPFSSWEIPQSL-----RNASGLQNFSANSANITGQ----IPSFF 184 (948)
Q Consensus 115 ~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~~~~p~~~-----~~l~~L~~L~l~~n~l~~~----~p~~~ 184 (948)
++|++|+|++|.|+...... ...+++|+.|+|++|+|+. .-...+ ...++|+.|+|++|.|+.. ++..+
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~-~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L 179 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGP-EACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGL 179 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCH-HHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCH-HHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHH
Confidence 34555555555544321111 1223455555555555542 111111 1234566666666655432 22222
Q ss_pred CCCCCCCCcEEEcccccccccCCCCcccccccceeccCCCCCCccCCCccccccCCCccEEEccCCcccccCC-----CC
Q 002238 185 GPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLP-----DF 259 (948)
Q Consensus 185 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~-----~~ 259 (948)
. ..++|++|+|++|+|...-...+ ...+...++|++|+|++|.++.... .+
T Consensus 180 ~--~~~~L~~L~Ls~N~l~~~g~~~L----------------------~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L 235 (372)
T 3un9_A 180 A--GNTSVTHLSLLHTGLGDEGLELL----------------------AAQLDRNRQLQELNVAYNGAGDTAALALARAA 235 (372)
T ss_dssp H--TCSSCCEEECTTSSCHHHHHHHH----------------------HHHGGGCSCCCEEECCSSCCCHHHHHHHHHHH
T ss_pred h--cCCCcCEEeCCCCCCCcHHHHHH----------------------HHHHhcCCCcCeEECCCCCCCHHHHHHHHHHH
Confidence 2 45667777777776653221111 1223455677777777777764211 23
Q ss_pred CCCCCCcEEeccCCccccccchhhhCCCC-----CcEEE--cccCccc
Q 002238 260 SGVKQLESLSLRDNFFTGPVPDSLVKLES-----LKIVN--MTNNLLQ 300 (948)
Q Consensus 260 ~~l~~L~~L~L~~N~l~~~~p~~l~~l~~-----L~~L~--Ls~N~l~ 300 (948)
...++|+.|+|++|.|+......+..+.. |+.+. +..|.+.
T Consensus 236 ~~~~~L~~L~Ls~N~i~~~g~~~L~~~~~~~~~~L~~l~~ll~~~~~~ 283 (372)
T 3un9_A 236 REHPSLELLHLYFNELSSEGRQVLRDLGGAAEGGARVVVSLTEGTAVS 283 (372)
T ss_dssp HHCSSCCEEECTTSSCCHHHHHHHHHCC------CEEECCCC----CH
T ss_pred HhCCCCCEEeccCCCCCHHHHHHHHHHhcCCCccchhhHhhhcCCccC
Confidence 34567788888888777555555544321 55665 5555554
No 404
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.04 E-value=4.4e-09 Score=118.26 Aligned_cols=289 Identities=15% Similarity=0.100 Sum_probs=157.1
Q ss_pred ccccCCCCCcEEEcccCCCCCCCC-CcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEccCCC--------------
Q 002238 86 SNLQNLTKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNP-------------- 150 (948)
Q Consensus 86 ~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-------------- 150 (948)
.+|.++++|+.+.|.. .++.+.. +|.++++|+.++|.++ ++.+...+|.++++|+.+.+..+-
T Consensus 65 ~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~l~~i~~~aF~~~~~~ 142 (394)
T 4fs7_A 65 AAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLMLKSIGVEAFKGCDFK 142 (394)
T ss_dssp TTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTTCCEECTTTTTTCCCS
T ss_pred HHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCceeeecceeeeccccc
Confidence 3455555555555542 2443333 4555555555555433 444444555555555544443220
Q ss_pred -------CCCCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccccCCCCccc-ccccceeccC
Q 002238 151 -------FSSWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSG-SQIQSLWVNG 222 (948)
Q Consensus 151 -------l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~l~~l~~~~ 222 (948)
+.. .-..+|.++++|+.+.+.++ +.......|. .+++|+.+++..| ++......|.. ..|+.+.+..
T Consensus 143 ~~~~~~~~~~-i~~~aF~~c~~L~~i~l~~~-~~~I~~~~F~--~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~ 217 (394)
T 4fs7_A 143 EITIPEGVTV-IGDEAFATCESLEYVSLPDS-METLHNGLFS--GCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPN 217 (394)
T ss_dssp EEECCTTCCE-ECTTTTTTCTTCCEEECCTT-CCEECTTTTT--TCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCT
T ss_pred ccccCccccc-cchhhhcccCCCcEEecCCc-cceecccccc--CCCCceEEEcCCC-ceEeCchhhccccccceeecCC
Confidence 110 01345677788888888654 3334455564 6778888887766 44333444433 2233333221
Q ss_pred CCCCCccCCCccccccCCCccEEEccCCcccccCCCCCCCCCCcEEeccCCccccccchhhhCCCCCcEEEcccCccccc
Q 002238 223 QNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGP 302 (948)
Q Consensus 223 ~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ 302 (948)
. .. ...+.....++|+.+.+..+.-.-....+.+...|+.+.+..+... .....|..+..|+.+.+..+.+..
T Consensus 218 ~---~~--~i~~~~~~~~~l~~i~ip~~~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~~- 290 (394)
T 4fs7_A 218 S---LY--YLGDFALSKTGVKNIIIPDSFTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVPE- 290 (394)
T ss_dssp T---CC--EECTTTTTTCCCCEEEECTTCCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEECT-
T ss_pred C---ce--EeehhhcccCCCceEEECCCceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeecc-
Confidence 1 00 0111223456777777765432211224667778888888777655 556677777888877776554321
Q ss_pred CCCCCCccccccccccCCCCCCCCCCCchhhhhhHHHHHhhCCcchhccccCCCCCCCCccceeecCCceEEEEccCCcc
Q 002238 303 VPEFDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNL 382 (948)
Q Consensus 303 ~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l 382 (948)
..+..+.+|..+...++. .. .....|....+|+.++|.++ +
T Consensus 291 -~~F~~~~~L~~i~l~~~i-~~------------------------------------I~~~aF~~c~~L~~i~lp~~-v 331 (394)
T 4fs7_A 291 -KTFYGCSSLTEVKLLDSV-KF------------------------------------IGEEAFESCTSLVSIDLPYL-V 331 (394)
T ss_dssp -TTTTTCTTCCEEEECTTC-CE------------------------------------ECTTTTTTCTTCCEECCCTT-C
T ss_pred -cccccccccccccccccc-ce------------------------------------echhhhcCCCCCCEEEeCCc-c
Confidence 012233333322221110 00 00123444567888888644 6
Q ss_pred cccCCccccCccccceEeCccccccccCCcCCcCCCCCcEEEccCC
Q 002238 383 TGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNN 428 (948)
Q Consensus 383 ~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~ls~N 428 (948)
+..-..+|.++++|+.++|..| ++..-...|.++.+|+.+++..|
T Consensus 332 ~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 332 EEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp CEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred cEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 6566677888899999988776 66455678888889998888654
No 405
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.97 E-value=1.8e-09 Score=119.88 Aligned_cols=143 Identities=15% Similarity=0.215 Sum_probs=107.3
Q ss_pred ccceecccCceEEEEEEEcCCcEEEEEEee--cCcCChhhHHHHHHHHHHHHhcC--CCceeeEEeEEEeC---CceEEE
Q 002238 597 EENILGRGGFGTVYKGELHDGTKIAVKRME--AGVISGKGLTEFKSEIAVLTKVR--HRHLVALLGHCLDG---NEKLLV 669 (948)
Q Consensus 597 ~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~--~~~~~~~~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~---~~~~lv 669 (948)
..+.++.|.++.||+.... +..+++|+.. ... .......+.+|+++++.+. +..+.+++.++.+. +..|+|
T Consensus 42 ~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~-~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~v 119 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSK-LLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYI 119 (359)
T ss_dssp EEEECCC-CCSCEEEEECS-SCEEEEECCCC-----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEE
T ss_pred eEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCC-CCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEE
Confidence 4567899999999999876 5788999765 321 1122357889999999996 45678888888776 447999
Q ss_pred EEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcc---------------------------------
Q 002238 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLA--------------------------------- 716 (948)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--------------------------------- 716 (948)
|||++|..+.+.. ...++..++..++.++++.|+.||+..
T Consensus 120 me~v~G~~l~~~~-------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (359)
T 3dxp_A 120 MEFVSGRVLWDQS-------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETE 192 (359)
T ss_dssp EECCCCBCCCCTT-------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCS
T ss_pred EEecCCeecCCCc-------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCc
Confidence 9999998874321 134677888899999999999999731
Q ss_pred ----------------------CCCeeecCCCCccEEEcCCCC--eEEeecCCcee
Q 002238 717 ----------------------HQSFIHRDLKPSNILLGDDMR--AKVADFGLVRL 748 (948)
Q Consensus 717 ----------------------~~~ivHrDik~~Nill~~~~~--~kl~DfGla~~ 748 (948)
...++|+|+++.||+++.++. +.|+||+.+..
T Consensus 193 ~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 193 SIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp CCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred CChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 257999999999999997753 68999998764
No 406
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.91 E-value=1.5e-09 Score=117.54 Aligned_cols=186 Identities=18% Similarity=0.241 Sum_probs=121.6
Q ss_pred cceecccCceEEEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcC-CCc--eeeEEeEEEeCC---ceEEEEE
Q 002238 598 ENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR-HRH--LVALLGHCLDGN---EKLLVFE 671 (948)
Q Consensus 598 ~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-H~n--iv~l~~~~~~~~---~~~lv~e 671 (948)
.+.++.|....||+.. +.+++|+... ......+.+|+++++.+. +.. +.+++.....++ ..|+|||
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~----~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~ 96 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKH----SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFT 96 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESS----HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCC----cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEc
Confidence 4568999999999873 5689997542 234577899999999883 332 344554443333 3489999
Q ss_pred ecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcc-----------------------------------
Q 002238 672 YMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLA----------------------------------- 716 (948)
Q Consensus 672 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~----------------------------------- 716 (948)
|++|.++.+... ..++..++..++.++++.++.||+..
T Consensus 97 ~i~G~~l~~~~~-------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (304)
T 3sg8_A 97 KIKGVPLTPLLL-------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQ 169 (304)
T ss_dssp CCCCEECCHHHH-------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHH
T ss_pred ccCCeECCcccc-------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCccc
Confidence 999988865431 24566677778888888888888511
Q ss_pred --------------------CCCeeecCCCCccEEEcC--CCCeEEeecCCceecCCCCCcee-------------eeec
Q 002238 717 --------------------HQSFIHRDLKPSNILLGD--DMRAKVADFGLVRLAPEGKGSIE-------------TRIA 761 (948)
Q Consensus 717 --------------------~~~ivHrDik~~Nill~~--~~~~kl~DfGla~~~~~~~~~~~-------------~~~~ 761 (948)
...++|+|+++.||+++. ...+.|+||+.+........-.. ..+.
T Consensus 170 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l 249 (304)
T 3sg8_A 170 MKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKIL 249 (304)
T ss_dssp HHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHH
Confidence 135899999999999998 45688999998774321100000 0000
Q ss_pred ccccccC-ceecccCCCCchhhHHHHHHHHHHHHhCCCCC
Q 002238 762 GTFGYLA-PEYAVTGRVTTKVDVFSFGVILMELITGRKAL 800 (948)
Q Consensus 762 gt~~y~a-PE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~ 800 (948)
...++.. |+.... .....+.|+++.++|++.+|+.+|
T Consensus 250 ~~Y~~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 250 NHYKHKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHHTCSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHcCCCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHH
Confidence 1111122 222111 122368999999999999998765
No 407
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.85 E-value=3.9e-08 Score=110.50 Aligned_cols=265 Identities=12% Similarity=0.051 Sum_probs=157.8
Q ss_pred CcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEccCCCCCCCCC-CccccCCCCCCEEEccCc--------------
Q 002238 110 SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFSSWEI-PQSLRNASGLQNFSANSA-------------- 174 (948)
Q Consensus 110 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-p~~~~~l~~L~~L~l~~n-------------- 174 (948)
+|.++.+|+.+.|.. .++.+...+|.++++|+.++|.++ ++ .+ ..+|.++.+|+.+.+..+
T Consensus 66 AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~--~I~~~aF~~c~~L~~i~~p~~l~~i~~~aF~~~~~ 141 (394)
T 4fs7_A 66 AFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VK--MIGRCTFSGCYALKSILLPLMLKSIGVEAFKGCDF 141 (394)
T ss_dssp TTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CC--EECTTTTTTCTTCCCCCCCTTCCEECTTTTTTCCC
T ss_pred HhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ce--EccchhhcccccchhhcccCceeeecceeeecccc
Confidence 799999999999985 488899999999999999999866 54 33 456777777777665433
Q ss_pred -------cccccCCCCCCCCCCCCCcEEEcccccccccCCCCccc-ccccceeccCCCCCCccCCCccccccCCCccEEE
Q 002238 175 -------NITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSG-SQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIW 246 (948)
Q Consensus 175 -------~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~ 246 (948)
.+......+|. .+++|+.+.+..+- .......|.+ ..|+.+.+... ........|.++..|+.+.
T Consensus 142 ~~~~~~~~~~~i~~~aF~--~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~----~~~I~~~~F~~~~~L~~i~ 214 (394)
T 4fs7_A 142 KEITIPEGVTVIGDEAFA--TCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN----LKIIRDYCFAECILLENME 214 (394)
T ss_dssp SEEECCTTCCEECTTTTT--TCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT----CCEECTTTTTTCTTCCBCC
T ss_pred cccccCccccccchhhhc--ccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC----ceEeCchhhccccccceee
Confidence 11111223454 78899999997664 3244444543 23444443211 1222233455666666666
Q ss_pred ccCCcccccCCCCCCCCCCcEEeccCCccccccchhhhCCCCCcEEEcccCcccccCCCCCCccccccccccCCCCCCCC
Q 002238 247 LHSNAFSGPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPEFDRSVSLDMAKGSNNFCLPSP 326 (948)
Q Consensus 247 Ls~N~l~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~~~~ 326 (948)
+..+...- ...+.....|+.+.+..+. +..-...+.++..|+.+.+..+...-....+.....+.........+
T Consensus 215 ~~~~~~~i-~~~~~~~~~l~~i~ip~~~-~~i~~~~f~~~~~l~~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~~i---- 288 (394)
T 4fs7_A 215 FPNSLYYL-GDFALSKTGVKNIIIPDSF-TELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIV---- 288 (394)
T ss_dssp CCTTCCEE-CTTTTTTCCCCEEEECTTC-CEECSSTTTTCSSCCEEEECCTTCEECSCTTTTCTTCCEEEECSSEE----
T ss_pred cCCCceEe-ehhhcccCCCceEEECCCc-eecccccccccccceeEEcCCCcceeeccccccccccceeccCceee----
Confidence 65554331 1222334566666665433 22334556666777777776654431111232322222221111100
Q ss_pred CCCchhhhhhHHHHHhhCCcchhccccCCCCCCCCccceeecCCceEEEEccCCcccccCCccccCccccceEeCccccc
Q 002238 327 GACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNL 406 (948)
Q Consensus 327 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l 406 (948)
....+....+|+.+.+.++ ++..-..+|.++++|+.++|.++ +
T Consensus 289 -----------------------------------~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v 331 (394)
T 4fs7_A 289 -----------------------------------PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-V 331 (394)
T ss_dssp -----------------------------------CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-C
T ss_pred -----------------------------------ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-c
Confidence 0012334557888888755 66566677889999999999754 6
Q ss_pred cccCCcCCcCCCCCcEEEccCC
Q 002238 407 SGMIPEGLSVLGALKELDVSNN 428 (948)
Q Consensus 407 ~g~ip~~l~~l~~L~~L~ls~N 428 (948)
+..-...|.++.+|+.+++..|
T Consensus 332 ~~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 332 EEIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp CEECTTTTTTCTTCCEECCCTT
T ss_pred cEEhHHhccCCCCCCEEEECcc
Confidence 6444678889999999988765
No 408
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.83 E-value=1.1e-09 Score=120.43 Aligned_cols=102 Identities=16% Similarity=0.201 Sum_probs=52.1
Q ss_pred CCCEEEEEeCCCCCcC-CC-------CccccCCCCCcEEEcccCCCCC---------CCC-CcCCCCCCcEEEccccccc
Q 002238 67 DKRITRIQIGHQNLQG-TL-------PSNLQNLTKLERLELQWNSISG---------PLP-SLNGLASLEVVMLSNNQFT 128 (948)
Q Consensus 67 ~~~v~~l~l~~~~l~~-~~-------p~~l~~l~~L~~L~L~~N~l~~---------~~p-~~~~l~~L~~L~L~~N~l~ 128 (948)
..+|+.|.+...+..| .. ..++..+++|+.|.+..+.... .+. -+..+++|+.|+|++|.-.
T Consensus 106 ~~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l 185 (362)
T 2ra8_A 106 LPSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL 185 (362)
T ss_dssp GGGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC
T ss_pred chhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc
Confidence 3578888888666553 21 2335567788888886653321 111 2344566666666665211
Q ss_pred CCCCccccCCCCCCEEEccCCCCCCCCCCcccc--CCCCCCEEEcc
Q 002238 129 SVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLR--NASGLQNFSAN 172 (948)
Q Consensus 129 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~--~l~~L~~L~l~ 172 (948)
.+++ +. +++|+.|+|..|.+.. .....+. .+++|+.|+|+
T Consensus 186 ~l~~--~~-~~~L~~L~L~~~~l~~-~~l~~l~~~~lp~L~~L~L~ 227 (362)
T 2ra8_A 186 SIGK--KP-RPNLKSLEIISGGLPD-SVVEDILGSDLPNLEKLVLY 227 (362)
T ss_dssp BCCS--CB-CTTCSEEEEECSBCCH-HHHHHHHHSBCTTCCEEEEE
T ss_pred eecc--cc-CCCCcEEEEecCCCCh-HHHHHHHHccCCCCcEEEEe
Confidence 2222 22 5566666666555442 1111222 45555555553
No 409
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.78 E-value=1.8e-07 Score=105.07 Aligned_cols=37 Identities=14% Similarity=0.276 Sum_probs=25.6
Q ss_pred CCCCCCCCcEEeccCCccccccchhhhCCCCCcEEEcc
Q 002238 258 DFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMT 295 (948)
Q Consensus 258 ~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls 295 (948)
.|.+...|+.+.+.++..+ .-...|.++++|+.+.+.
T Consensus 260 aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~ 296 (394)
T 4gt6_A 260 AFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS 296 (394)
T ss_dssp TTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC
T ss_pred eeeecccccEEecccccce-ecCcccccccccccccCC
Confidence 3666777777777766554 556667777778877774
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.73 E-value=3.7e-09 Score=116.32 Aligned_cols=185 Identities=17% Similarity=0.189 Sum_probs=124.2
Q ss_pred CCCCcEEEcccCCCCC-CC--------CCcCCCCCCcEEEccccccc---------CCCCccccCCCCCCEEEccCCCCC
Q 002238 91 LTKLERLELQWNSISG-PL--------PSLNGLASLEVVMLSNNQFT---------SVPSDFFTGLSSLQSIEIDNNPFS 152 (948)
Q Consensus 91 l~~L~~L~L~~N~l~~-~~--------p~~~~l~~L~~L~L~~N~l~---------~~~~~~~~~l~~L~~L~Ls~N~l~ 152 (948)
+..++.|.+......+ .. .+...+++|+.|.+..+... +.....+..+++|+.|+|++|.-.
T Consensus 106 ~~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l 185 (362)
T 2ra8_A 106 LPSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL 185 (362)
T ss_dssp GGGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC
T ss_pred chhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc
Confidence 3567888888666552 11 13456889999999765432 123455678899999999988311
Q ss_pred CCCCCccccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEccc--ccccccC-CCCcccccccceeccCCCCCCcc
Q 002238 153 SWEIPQSLRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAF--NQLIGGL-PASFSGSQIQSLWVNGQNGNAKL 229 (948)
Q Consensus 153 ~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~--N~l~~~~-p~~~~~~~l~~l~~~~~~~~~~~ 229 (948)
.++. + .+++|+.|+|..|.+.......+....+|+|++|+|+. |...+.. ...+.
T Consensus 186 --~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~------------------ 243 (362)
T 2ra8_A 186 --SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFR------------------ 243 (362)
T ss_dssp --BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTG------------------
T ss_pred --eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHH------------------
Confidence 3444 3 38899999999998875544333222589999999864 2221110 00000
Q ss_pred CCCcccc--ccCCCccEEEccCCcccccCC-C---CCCCCCCcEEeccCCccccc----cchhhhCCCCCcEEEcccCcc
Q 002238 230 GGGIDVI--QNMTSLKEIWLHSNAFSGPLP-D---FSGVKQLESLSLRDNFFTGP----VPDSLVKLESLKIVNMTNNLL 299 (948)
Q Consensus 230 ~~~~~~l--~~l~~L~~L~Ls~N~l~~~~~-~---~~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l 299 (948)
..+ ..+++|+.|+|++|.+.+... . ...+++|++|+|+.|.|.+. ++..+..+++|+.|+|++|.+
T Consensus 244 ----~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i 319 (362)
T 2ra8_A 244 ----PLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYL 319 (362)
T ss_dssp ----GGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBC
T ss_pred ----HHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcC
Confidence 001 257899999999999875332 1 23578999999999999864 444556779999999999988
Q ss_pred cc
Q 002238 300 QG 301 (948)
Q Consensus 300 ~g 301 (948)
+.
T Consensus 320 ~d 321 (362)
T 2ra8_A 320 SD 321 (362)
T ss_dssp CH
T ss_pred CH
Confidence 63
No 411
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.72 E-value=4.8e-07 Score=101.49 Aligned_cols=293 Identities=14% Similarity=0.162 Sum_probs=177.1
Q ss_pred ccccCC-CCCcEEEcccCCCCCCCC-CcCCCCCCcEEEccccc---ccCCCCccccCCCCCCEEEccCCCCCCCCC-Ccc
Q 002238 86 SNLQNL-TKLERLELQWNSISGPLP-SLNGLASLEVVMLSNNQ---FTSVPSDFFTGLSSLQSIEIDNNPFSSWEI-PQS 159 (948)
Q Consensus 86 ~~l~~l-~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~N~---l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-p~~ 159 (948)
.+|.+. ..|+.+.+..+ ++.+-. +|.++++|+.+.+..|. ++.+...+|.++.+|+.+.+.++ ++ .+ ...
T Consensus 57 ~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~--~I~~~a 132 (394)
T 4gt6_A 57 RVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VT--EIDSEA 132 (394)
T ss_dssp TTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CS--EECTTT
T ss_pred hhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cc--eehhhh
Confidence 356665 35888888643 555444 68888888888887764 66677778888888888877665 33 23 356
Q ss_pred ccCCCCCCEEEccCccccccCCCCCCCCCCCCCcEEEcccccccccCCCCcccccccceeccCCCCCCccCCCccccccC
Q 002238 160 LRNASGLQNFSANSANITGQIPSFFGPDEFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNM 239 (948)
Q Consensus 160 ~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~l 239 (948)
|..+.+|+.+.+..+ +.......|. ....|+.+.+..+ ++..-..+|....++++.+... ........|.++
T Consensus 133 F~~c~~L~~i~lp~~-~~~I~~~~F~--~c~~L~~i~~~~~-~~~I~~~aF~~~~l~~i~ip~~----~~~i~~~af~~c 204 (394)
T 4gt6_A 133 FHHCEELDTVTIPEG-VTSVADGMFS--YCYSLHTVTLPDS-VTAIEERAFTGTALTQIHIPAK----VTRIGTNAFSEC 204 (394)
T ss_dssp TTTCTTCCEEECCTT-CCEECTTTTT--TCTTCCEEECCTT-CCEECTTTTTTCCCSEEEECTT----CCEECTTTTTTC
T ss_pred hhhhcccccccccce-eeeeccccee--cccccccccccce-eeEeccccccccceeEEEECCc----ccccccchhhhc
Confidence 777888888888643 4444455554 6778888888655 4444555565556666655321 222233456677
Q ss_pred CCccEEEccCCcccccCCC--------------CCCCCCCcEEeccCCccccccchhhhCCCCCcEEEcccCcccccCCC
Q 002238 240 TSLKEIWLHSNAFSGPLPD--------------FSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQGPVPE 305 (948)
Q Consensus 240 ~~L~~L~Ls~N~l~~~~~~--------------~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~ 305 (948)
.++.......+........ +.....+..+.+.+ .++..-..+|.++..|+.+.+..+..+=.--.
T Consensus 205 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~-~v~~i~~~aF~~c~~L~~i~lp~~~~~I~~~a 283 (394)
T 4gt6_A 205 FALSTITSDSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIPN-GVARIETHAFDSCAYLASVKMPDSVVSIGTGA 283 (394)
T ss_dssp TTCCEEEECCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECCT-TEEEECTTTTTTCSSCCEEECCTTCCEECTTT
T ss_pred cccceecccccccccccceeecccccccccccccccccccceEEcCC-cceEcccceeeecccccEEecccccceecCcc
Confidence 7777777665544321111 11223344454443 33434466788899999999876654311112
Q ss_pred CCCccccccccccCCCCCCCCCCCchhhhhhHHHHHhhCCcchhccccCCCCCCCCccceeecCCceEEEEccCCccccc
Q 002238 306 FDRSVSLDMAKGSNNFCLPSPGACDPRLNALLSVVKLMGYPQRFAENWKGNDPCSDWIGVTCTKGNITVINFQKMNLTGT 385 (948)
Q Consensus 306 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ls~n~l~g~ 385 (948)
|.++..|........ ...+ ..+.|....+|+.++|.++ ++..
T Consensus 284 F~~c~~L~~i~l~~~-i~~I------------------------------------~~~aF~~c~~L~~i~lp~~-v~~I 325 (394)
T 4gt6_A 284 FMNCPALQDIEFSSR-ITEL------------------------------------PESVFAGCISLKSIDIPEG-ITQI 325 (394)
T ss_dssp TTTCTTCCEEECCTT-CCEE------------------------------------CTTTTTTCTTCCEEECCTT-CCEE
T ss_pred cccccccccccCCCc-cccc------------------------------------CceeecCCCCcCEEEeCCc-ccEe
Confidence 444444443332211 0000 1123445567888888754 5555
Q ss_pred CCccccCccccceEeCccccccccCCcCCcCCCCCcEEEccCCcc
Q 002238 386 ISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNNQL 430 (948)
Q Consensus 386 ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~ls~N~l 430 (948)
-..+|.++++|+.+.|..+ ++..-...|.++++|+.+++.+|..
T Consensus 326 ~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 326 LDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp CTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHH
T ss_pred hHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCcee
Confidence 5677888888888888654 5534456788888888888887754
No 412
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.61 E-value=3.2e-07 Score=99.75 Aligned_cols=136 Identities=16% Similarity=0.268 Sum_probs=100.7
Q ss_pred CCcccceecccCceEEEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCC----CceeeEEeEEEeCCceEEE
Q 002238 594 NFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRH----RHLVALLGHCLDGNEKLLV 669 (948)
Q Consensus 594 ~~~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H----~niv~l~~~~~~~~~~~lv 669 (948)
.....+.++.|....||+. |+.+++|+... ......+.+|+++++.+.+ ..+.+++++ +..++|
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~----~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lv 105 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKR----DSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNI 105 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESS----HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCc----HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEE
Confidence 5566778999999999998 67789997542 2334568999999999976 223455544 567899
Q ss_pred EEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccC--------------------------------
Q 002238 670 FEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAH-------------------------------- 717 (948)
Q Consensus 670 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~-------------------------------- 717 (948)
|||++|.++.+... ..++..++..++.++++.++.||+...
T Consensus 106 me~i~G~~l~~~~~-------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (320)
T 3r70_A 106 MKYIKGERITYEQY-------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKE 178 (320)
T ss_dssp EECCCCBCCCHHHH-------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHT
T ss_pred EeecCCcccccccc-------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhc
Confidence 99999998864321 235556667777788888888874321
Q ss_pred ----------------------------CCeeecCCCCccEEEcCCCCeEEeecCCcee
Q 002238 718 ----------------------------QSFIHRDLKPSNILLGDDMRAKVADFGLVRL 748 (948)
Q Consensus 718 ----------------------------~~ivHrDik~~Nill~~~~~~kl~DfGla~~ 748 (948)
..++|+|++|.||+++.+..+.|+||+.+..
T Consensus 179 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 179 QLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp TCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred ccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 2359999999999999866679999998764
No 413
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.54 E-value=1.6e-09 Score=112.96 Aligned_cols=147 Identities=14% Similarity=0.156 Sum_probs=63.9
Q ss_pred CCCccceEEeCC-CCEEEEEeCC---CCCcCCCCc-cccCCCCCcEEEcccCCCCCCCC--CcCCCCCCcE--EEccccc
Q 002238 56 PCKWNHVVCIED-KRITRIQIGH---QNLQGTLPS-NLQNLTKLERLELQWNSISGPLP--SLNGLASLEV--VMLSNNQ 126 (948)
Q Consensus 56 ~C~w~gv~c~~~-~~v~~l~l~~---~~l~~~~p~-~l~~l~~L~~L~L~~N~l~~~~p--~~~~l~~L~~--L~L~~N~ 126 (948)
.|.|.|+.|+.. .+|..+-..+ ..+.+.+.+ .+..++. .|...+|.-++.++ .|...+.|+. ++++.|+
T Consensus 77 l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~ 154 (267)
T 3rw6_A 77 LKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNR 154 (267)
T ss_dssp HHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTS
T ss_pred HHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCCH
Confidence 589999999864 3665554433 233344432 1111111 12223333333222 2333333333 4444442
Q ss_pred cc---CCCCccccCCCCCCEEEccCCCCCCCC-CCccccCCCCCCEEEccCccccccC-CCCCCCCCCCCCcEEEccccc
Q 002238 127 FT---SVPSDFFTGLSSLQSIEIDNNPFSSWE-IPQSLRNASGLQNFSANSANITGQI-PSFFGPDEFPGLTILHLAFNQ 201 (948)
Q Consensus 127 l~---~~~~~~~~~l~~L~~L~Ls~N~l~~~~-~p~~~~~l~~L~~L~l~~n~l~~~~-p~~~~~~~l~~L~~L~Ls~N~ 201 (948)
.. +.......++++|+.|+|++|+|+++. +|..+..+++|+.|+|++|+|++.. ...+. .+ +|+.|+|++|.
T Consensus 155 ~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~~~l~~l~--~l-~L~~L~L~~Np 231 (267)
T 3rw6_A 155 RSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIK--GL-KLEELWLDGNS 231 (267)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSGGGGGGGT--TS-CCSEEECTTST
T ss_pred HHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCchhhhhcc--cC-CcceEEccCCc
Confidence 22 111222234555555555555555321 2334445555555555555555431 01111 12 55555555555
Q ss_pred ccccCC
Q 002238 202 LIGGLP 207 (948)
Q Consensus 202 l~~~~p 207 (948)
+.+.+|
T Consensus 232 l~~~~~ 237 (267)
T 3rw6_A 232 LCDTFR 237 (267)
T ss_dssp TGGGCS
T ss_pred CccccC
Confidence 554443
No 414
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.51 E-value=5.2e-07 Score=96.05 Aligned_cols=78 Identities=19% Similarity=0.202 Sum_probs=61.6
Q ss_pred CcccceecccCceEEEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCC---ceeeEEeEEEeCCceEEEEE
Q 002238 595 FSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR---HLVALLGHCLDGNEKLLVFE 671 (948)
Q Consensus 595 ~~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~~~~~~~~~~~lv~e 671 (948)
....+.|+.|.++.||++...+|+.++||+.... .......|.+|++.++.+++. .+.+++++. ..++|||
T Consensus 17 ~~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~--~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme 90 (288)
T 3d1u_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDD--APALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAME 90 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTT--CCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEE
T ss_pred ccceeeeCCcchhheEEEEeCCCCeEEEEecCCC--CcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEE
Confidence 3446789999999999999888999999986532 122236789999999999875 577777663 4699999
Q ss_pred ecCCCCh
Q 002238 672 YMPQGTL 678 (948)
Q Consensus 672 ~~~~gsL 678 (948)
|++++.+
T Consensus 91 ~l~g~~~ 97 (288)
T 3d1u_A 91 WVDERPP 97 (288)
T ss_dssp CCCCCCC
T ss_pred ecccCCC
Confidence 9999875
No 415
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.41 E-value=2.5e-06 Score=91.87 Aligned_cols=136 Identities=18% Similarity=0.181 Sum_probs=92.4
Q ss_pred cceecccCceEEEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCC---ceeeEEeEEE-eCCceEEEEEec
Q 002238 598 ENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR---HLVALLGHCL-DGNEKLLVFEYM 673 (948)
Q Consensus 598 ~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~~~~~-~~~~~~lv~e~~ 673 (948)
.+.++.|....||+. |+.++||+-. .......+.+|+++++.+.+. .+.+++.++. ..+..++||||+
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~----~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i 95 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPK----SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKV 95 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEES----SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECC
T ss_pred eeecCCCcceeEEEE----CCEEEEEecC----CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEecc
Confidence 456888999999998 6778999742 233456789999999999652 3556666664 445678999999
Q ss_pred CCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhc--------------------------------------
Q 002238 674 PQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGL-------------------------------------- 715 (948)
Q Consensus 674 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-------------------------------------- 715 (948)
+|..+.+... ..++..++..++.++++.|+.||+.
T Consensus 96 ~G~~l~~~~~-------~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~ 168 (306)
T 3tdw_A 96 QGQILGEDGM-------AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESL 168 (306)
T ss_dssp CSEECHHHHH-------TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHH
T ss_pred CCeECchhhh-------hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhh
Confidence 9988865321 1123333344444444444444421
Q ss_pred -------------------cCCCeeecCCCCccEEEcC---CCC-eEEeecCCcee
Q 002238 716 -------------------AHQSFIHRDLKPSNILLGD---DMR-AKVADFGLVRL 748 (948)
Q Consensus 716 -------------------~~~~ivHrDik~~Nill~~---~~~-~kl~DfGla~~ 748 (948)
....++|+|+++.||+++. ++. +.|+||+.+..
T Consensus 169 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 169 RDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1346799999999999987 455 48999997653
No 416
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.37 E-value=1.7e-06 Score=91.45 Aligned_cols=134 Identities=16% Similarity=0.160 Sum_probs=96.2
Q ss_pred eecccCce-EEEEEEEc-CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcC-CCceeeEEeEEEeCCceEEEEEecCCC
Q 002238 600 ILGRGGFG-TVYKGELH-DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR-HRHLVALLGHCLDGNEKLLVFEYMPQG 676 (948)
Q Consensus 600 ~lg~G~fg-~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e~~~~g 676 (948)
.+..|..| .||+.... ++..++||+-.. .....+.+|++.++.+. +-.+.++++++.+++..++|||+++|.
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~-----~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~ 105 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG-----SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGK 105 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEET-----HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSE
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCC-----CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCc
Confidence 45556555 69998765 467899997543 23467889999999884 334678888999999999999999998
Q ss_pred ChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhcc----------------------------------------
Q 002238 677 TLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLA---------------------------------------- 716 (948)
Q Consensus 677 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---------------------------------------- 716 (948)
++.+..... ......++.+++..|+.||+..
T Consensus 106 ~~~~~~~~~---------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (272)
T 4gkh_A 106 TAFQVLEEY---------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPV 176 (272)
T ss_dssp EHHHHHHHC---------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCH
T ss_pred cccccccCC---------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHH
Confidence 887654221 0122345666666677776420
Q ss_pred ---------------CCCeeecCCCCccEEEcCCCCeEEeecCCce
Q 002238 717 ---------------HQSFIHRDLKPSNILLGDDMRAKVADFGLVR 747 (948)
Q Consensus 717 ---------------~~~ivHrDik~~Nill~~~~~~kl~DfGla~ 747 (948)
...++|+|+.+.||+++.++.+-|+||+.+.
T Consensus 177 ~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 177 EQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 1237899999999999987777899999765
No 417
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.32 E-value=2.8e-05 Score=86.54 Aligned_cols=61 Identities=13% Similarity=0.120 Sum_probs=40.8
Q ss_pred eecCCceEEEEccCCcccccCCccccCccccceEeCccccccccCCcCCcCCCCCcEEEccC
Q 002238 366 TCTKGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSN 427 (948)
Q Consensus 366 ~~~~~~L~~L~ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~ls~ 427 (948)
|....+|+.+++.++.++..-...|.++++|+.++|..+ ++-.-...|.++.+|+.+.+..
T Consensus 282 F~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~ 342 (379)
T 4h09_A 282 CSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPK 342 (379)
T ss_dssp TTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCT
T ss_pred cccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECC
Confidence 334456777777777777666677777778888877644 5533355677777777776654
No 418
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.29 E-value=4.5e-06 Score=92.06 Aligned_cols=77 Identities=12% Similarity=0.058 Sum_probs=58.5
Q ss_pred CcccceecccCceEEEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCc--eeeEEeEEEeC-CceEEEEE
Q 002238 595 FSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRH--LVALLGHCLDG-NEKLLVFE 671 (948)
Q Consensus 595 ~~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~~~~~~~-~~~~lv~e 671 (948)
....+.++.|....+|+... +|+.+++|+.... ..+.+|+.+++.+.... +.++++++.+. +..|+|||
T Consensus 43 ~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e 114 (362)
T 3ovc_A 43 VSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISR 114 (362)
T ss_dssp CEEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEE
T ss_pred CceEEECCCCCcceEEEEEE-CCcEEEEEeCCch-------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEE
Confidence 44567789999999999986 4889999976432 35889999999986533 45677776654 56899999
Q ss_pred ecCCCChh
Q 002238 672 YMPQGTLS 679 (948)
Q Consensus 672 ~~~~gsL~ 679 (948)
|++|.++.
T Consensus 115 ~l~G~~l~ 122 (362)
T 3ovc_A 115 RAQGVTLQ 122 (362)
T ss_dssp CCCSEETT
T ss_pred ecCCCCcc
Confidence 99986653
No 419
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.15 E-value=2.5e-07 Score=91.66 Aligned_cols=67 Identities=16% Similarity=0.187 Sum_probs=39.6
Q ss_pred ccccCCCCCcEEEcccC-CCCCC-----CCCcCCCCCCcEEEcccccccCC----CCccccCCCCCCEEEccCCCCC
Q 002238 86 SNLQNLTKLERLELQWN-SISGP-----LPSLNGLASLEVVMLSNNQFTSV----PSDFFTGLSSLQSIEIDNNPFS 152 (948)
Q Consensus 86 ~~l~~l~~L~~L~L~~N-~l~~~-----~p~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~ 152 (948)
..+...+.|++|+|++| .|... ...+...++|++|+|++|.|+.. ....+...++|++|+|++|.|.
T Consensus 30 ~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 30 RIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 44566677777777777 77541 11345556677777777766542 2233444556666666666665
No 420
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.14 E-value=3e-07 Score=91.06 Aligned_cols=64 Identities=17% Similarity=0.168 Sum_probs=44.6
Q ss_pred ccCCCccEEEccCCccccc-----CCCCCCCCCCcEEec--cCCccccc----cchhhhCCCCCcEEEcccCccc
Q 002238 237 QNMTSLKEIWLHSNAFSGP-----LPDFSGVKQLESLSL--RDNFFTGP----VPDSLVKLESLKIVNMTNNLLQ 300 (948)
Q Consensus 237 ~~l~~L~~L~Ls~N~l~~~-----~~~~~~l~~L~~L~L--~~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~ 300 (948)
...++|++|+|++|.|... ...+...+.|+.|+| ++|.|... +...+...++|++|+|++|.+.
T Consensus 90 ~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 90 KVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 3456777777777777652 223555677888888 77888743 3455666688999999998875
No 421
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.09 E-value=5.6e-06 Score=91.40 Aligned_cols=82 Identities=10% Similarity=-0.013 Sum_probs=56.6
Q ss_pred ccee-cccCceEEEEEEEc-------CCcEEEEEEeecCcC-ChhhHHHHHHHHHHHHhcC-C--CceeeEEeEEEeC--
Q 002238 598 ENIL-GRGGFGTVYKGELH-------DGTKIAVKRMEAGVI-SGKGLTEFKSEIAVLTKVR-H--RHLVALLGHCLDG-- 663 (948)
Q Consensus 598 ~~~l-g~G~fg~Vy~~~~~-------~g~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-H--~niv~l~~~~~~~-- 663 (948)
.+.| +.|....+|+.... +++.+++|+...... .......+.+|+++++.+. + -.+.+++.++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3567 88999999998764 267899997643210 0001245788999998884 2 3567788777655
Q ss_pred -CceEEEEEecCCCChh
Q 002238 664 -NEKLLVFEYMPQGTLS 679 (948)
Q Consensus 664 -~~~~lv~e~~~~gsL~ 679 (948)
+..++||||++|..+.
T Consensus 105 ~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp TSSCEEEEECCCCBCCC
T ss_pred cCCceEEEEecCCCChh
Confidence 3568999999987654
No 422
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.00 E-value=2.9e-06 Score=88.30 Aligned_cols=66 Identities=21% Similarity=0.234 Sum_probs=57.2
Q ss_pred cCCceEEEEccCCcccc--cCCccccCccccceEeCccccccccCCcCCcCCC--CCcEEEccCCcccCCCC
Q 002238 368 TKGNITVINFQKMNLTG--TISPEFASFKSLQRLILADNNLSGMIPEGLSVLG--ALKELDVSNNQLYGKIP 435 (948)
Q Consensus 368 ~~~~L~~L~ls~n~l~g--~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~--~L~~L~ls~N~l~g~ip 435 (948)
.+++|+.|+||+|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|++++.+|
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCS
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccC
Confidence 46789999999999998 6778888999999999999999965 3455555 99999999999998776
No 423
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.98 E-value=4.3e-05 Score=83.61 Aligned_cols=142 Identities=15% Similarity=0.180 Sum_probs=81.5
Q ss_pred ceecccCceEEEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcC-----CCceeeEE-e--EEEeCCceEEEE
Q 002238 599 NILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR-----HRHLVALL-G--HCLDGNEKLLVF 670 (948)
Q Consensus 599 ~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-----H~niv~l~-~--~~~~~~~~~lv~ 670 (948)
+.|+.|..+.||+....+ ..+++|+.... ..++..|+++++.+. .|.++... | +...++..++||
T Consensus 38 ~~l~gG~~n~~~~v~~~~-~~~vlk~~~~~------~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~ 110 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDS-GAVCLKRIHRP------EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVY 110 (346)
T ss_dssp EECC----CEEEEEEETT-EEEEEEEECSC------HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEE
T ss_pred eeccccccCcEEEEEeCC-CCEEEEecCCC------HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEE
Confidence 456667789999998764 45999987642 133445666666553 24443311 1 123456779999
Q ss_pred EecCCCChh--------------HHHHhhhhcC--C-------CCCCHHHHH----------------------------
Q 002238 671 EYMPQGTLS--------------RHIFNWAEEG--L-------KPLEWNRRL---------------------------- 699 (948)
Q Consensus 671 e~~~~gsL~--------------~~l~~~~~~~--~-------~~l~~~~~~---------------------------- 699 (948)
||++|..+. ..+|.....- . ..-.|...+
T Consensus 111 ~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 190 (346)
T 2q83_A 111 DWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQ 190 (346)
T ss_dssp ECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHH
T ss_pred EeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHH
Confidence 999986542 1122211100 0 012343211
Q ss_pred ---HHHHHHHHHHHHHHh----------ccCCCeeecCCCCccEEEcCCCCeEEeecCCce
Q 002238 700 ---TIALDVARGVEYLHG----------LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 747 (948)
Q Consensus 700 ---~i~~~i~~~l~~LH~----------~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~ 747 (948)
.+...+..++++|+. .....++|+|+++.||+++.++.+.|+||+.+.
T Consensus 191 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 191 EIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 111223445666653 125789999999999999888899999999654
No 424
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.84 E-value=0.00062 Score=75.51 Aligned_cols=59 Identities=8% Similarity=0.146 Sum_probs=46.9
Q ss_pred CCceEEEEccCCcccccCCccccCccccceEeCccccccccCCcCCcCCCCCcEEEccCC
Q 002238 369 KGNITVINFQKMNLTGTISPEFASFKSLQRLILADNNLSGMIPEGLSVLGALKELDVSNN 428 (948)
Q Consensus 369 ~~~L~~L~ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~l~~l~~L~~L~ls~N 428 (948)
..+|+.+.+..+ +...-...|.++++|+.+.+.++.++..-...|.++.+|+.++|..+
T Consensus 262 ~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~ 320 (379)
T 4h09_A 262 CTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA 320 (379)
T ss_dssp CTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT
T ss_pred eehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc
Confidence 346777777543 55555667899999999999999998666788999999999999754
No 425
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.81 E-value=9.1e-05 Score=82.91 Aligned_cols=77 Identities=13% Similarity=0.128 Sum_probs=50.9
Q ss_pred cceecccCceEEEEEEEc-CCcEEEEEEeecCcC--C---hhhHHHHHHHHHHHHhcCC--Cc-eeeEEeEEEeCCceEE
Q 002238 598 ENILGRGGFGTVYKGELH-DGTKIAVKRMEAGVI--S---GKGLTEFKSEIAVLTKVRH--RH-LVALLGHCLDGNEKLL 668 (948)
Q Consensus 598 ~~~lg~G~fg~Vy~~~~~-~g~~vavK~~~~~~~--~---~~~~~~~~~E~~~l~~l~H--~n-iv~l~~~~~~~~~~~l 668 (948)
.+.||.|.++.||++... +++.|+||....... . ......+..|+++++.+.. |. +.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 467999999999999754 468999998653211 0 1123457789999988742 33 3455543 4556789
Q ss_pred EEEecCCC
Q 002238 669 VFEYMPQG 676 (948)
Q Consensus 669 v~e~~~~g 676 (948)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999874
No 426
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.75 E-value=0.00021 Score=76.42 Aligned_cols=141 Identities=15% Similarity=0.151 Sum_probs=93.9
Q ss_pred ccceecccCceEEEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcC---CCceeeEEeEEEeCCceEEEEEec
Q 002238 597 EENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR---HRHLVALLGHCLDGNEKLLVFEYM 673 (948)
Q Consensus 597 ~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~~~~~lv~e~~ 673 (948)
..+.|+.|....+|+.... +..++||+.... ....+.+|++.|+.+. ...+.++++++...+..++||||+
T Consensus 40 ~~~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~-----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l 113 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLINDE-VQTVFVKINERS-----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEAL 113 (312)
T ss_dssp EEEEECCSSSSEEEEEESS-SCEEEEEEEEGG-----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECC
T ss_pred eeEEeCCccceeeeEEEEC-CCeEEEEeCCcc-----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEec
Confidence 3567899999999999864 788999986532 3567899999999883 366788888888888899999999
Q ss_pred CCCChh--------H---HHHhhhh-cCC----------------CCCCHHHHH---HHHH----------------HHH
Q 002238 674 PQGTLS--------R---HIFNWAE-EGL----------------KPLEWNRRL---TIAL----------------DVA 706 (948)
Q Consensus 674 ~~gsL~--------~---~l~~~~~-~~~----------------~~l~~~~~~---~i~~----------------~i~ 706 (948)
++..+. + .+|.... ... -.-+|.... ++.. .++
T Consensus 114 ~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~ 193 (312)
T 3jr1_A 114 NKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIV 193 (312)
T ss_dssp CCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHH
T ss_pred cCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHH
Confidence 987652 1 1222111 000 012465432 1111 111
Q ss_pred HH-HHHHHh-ccCCCeeecCCCCccEEEcCCCCeEEeecC
Q 002238 707 RG-VEYLHG-LAHQSFIHRDLKPSNILLGDDMRAKVADFG 744 (948)
Q Consensus 707 ~~-l~~LH~-~~~~~ivHrDik~~Nill~~~~~~kl~DfG 744 (948)
.. ...|.. ..+..+||+|+.+.|++++.++ +.|.|+.
T Consensus 194 ~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 194 QIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 11 223421 1246899999999999999887 8898874
No 427
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.73 E-value=0.0001 Score=78.40 Aligned_cols=79 Identities=19% Similarity=0.203 Sum_probs=57.4
Q ss_pred CCcccceecccCceEEEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCC---CceeeEEeEEEeCCceEEEE
Q 002238 594 NFSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRH---RHLVALLGHCLDGNEKLLVF 670 (948)
Q Consensus 594 ~~~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H---~niv~l~~~~~~~~~~~lv~ 670 (948)
.....+.+|.|..+.||+.++.||+.|+||+-... .......|.+|++.|+.+.- -.+.+++++. ..++||
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~--~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~ 89 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDD--APALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAM 89 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTT--CCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEE
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCC--CcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEE
Confidence 45556789999999999999999999999986543 22223468899999998842 2244555432 348999
Q ss_pred EecCCCCh
Q 002238 671 EYMPQGTL 678 (948)
Q Consensus 671 e~~~~gsL 678 (948)
||++++..
T Consensus 90 e~l~~~~~ 97 (288)
T 3f7w_A 90 EWVDERPP 97 (288)
T ss_dssp ECCCCCCC
T ss_pred EeecccCC
Confidence 99987654
No 428
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.70 E-value=9.7e-05 Score=83.31 Aligned_cols=77 Identities=22% Similarity=0.262 Sum_probs=48.3
Q ss_pred CCCeeecCCCCccEEEcCCCCeEEeecCCceecCCCCCceeeeecc--cccccCceecccC---CCCchhhHHHHHHHHH
Q 002238 717 HQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAG--TFGYLAPEYAVTG---RVTTKVDVFSFGVILM 791 (948)
Q Consensus 717 ~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~---~~~~~~Dv~s~Gv~l~ 791 (948)
...++|+|+++.||+++.++ ++++||+.+..-..... . ....+ ...|++|+..... .-....++......+|
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~D-l-a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFD-I-GAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTW 307 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHH-H-HHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHH-H-HHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHH
Confidence 47899999999999998776 99999998774321110 0 00011 1346666655321 1123456667788888
Q ss_pred HHHhC
Q 002238 792 ELITG 796 (948)
Q Consensus 792 elltg 796 (948)
+.+++
T Consensus 308 ~~y~~ 312 (420)
T 2pyw_A 308 NLFNK 312 (420)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77764
No 429
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.40 E-value=0.0013 Score=71.13 Aligned_cols=159 Identities=12% Similarity=0.130 Sum_probs=88.8
Q ss_pred eHHHHHHhhcCCcc-----cceecccCceEEEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCc--eeeE
Q 002238 584 SIQVLRNVTNNFSE-----ENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRH--LVAL 656 (948)
Q Consensus 584 ~~~~l~~~~~~~~~-----~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l 656 (948)
+.+++..+...|.. .+.|+.|....+|+....+| .+++|+.... .....+..|+++++.+.... +.++
T Consensus 8 ~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~----~~~~~l~~e~~~l~~L~~~g~~vP~~ 82 (322)
T 2ppq_A 8 TEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKR----VEKNDLPFFLGLMQHLAAKGLSCPLP 82 (322)
T ss_dssp CHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-------CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred CHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCC----CCHHHHHHHHHHHHHHHHCCCCCCcc
Confidence 34555555555654 24567788899999987655 6889987642 11235667888887773212 2333
Q ss_pred EeE------EEeCCceEEEEEecCCCChhH--------------HHHhhhhc-CC------CCCCHHHHHH---------
Q 002238 657 LGH------CLDGNEKLLVFEYMPQGTLSR--------------HIFNWAEE-GL------KPLEWNRRLT--------- 700 (948)
Q Consensus 657 ~~~------~~~~~~~~lv~e~~~~gsL~~--------------~l~~~~~~-~~------~~l~~~~~~~--------- 700 (948)
+.. ....+..++||+|++|..+.. .+|..... .. ....|...+.
T Consensus 83 ~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 162 (322)
T 2ppq_A 83 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV 162 (322)
T ss_dssp CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred cCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhh
Confidence 321 122356789999999865421 12211100 00 0012333111
Q ss_pred ---HHHHHHHHHHHHHhc----cCCCeeecCCCCccEEEcCCCCeEEeecCCce
Q 002238 701 ---IALDVARGVEYLHGL----AHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 747 (948)
Q Consensus 701 ---i~~~i~~~l~~LH~~----~~~~ivHrDik~~Nill~~~~~~kl~DfGla~ 747 (948)
+...+.+.+++++.. ...+++|+|+.+.||+++.+..+.|+||+.+.
T Consensus 163 ~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 163 EKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp STTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 011244455666532 13579999999999999987666899998654
No 430
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.40 E-value=4e-05 Score=73.80 Aligned_cols=58 Identities=17% Similarity=0.217 Sum_probs=29.0
Q ss_pred CCCcEEEcccCCCCC-CCCCcCCCCCCcEEEccccc-ccCCCCccccCC----CCCCEEEccCC
Q 002238 92 TKLERLELQWNSISG-PLPSLNGLASLEVVMLSNNQ-FTSVPSDFFTGL----SSLQSIEIDNN 149 (948)
Q Consensus 92 ~~L~~L~L~~N~l~~-~~p~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l----~~L~~L~Ls~N 149 (948)
.+|++|||+++.|+. .+..+.++++|++|+|++|. |+..--..++.+ ++|++|+|++|
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C 124 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISC 124 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESC
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCC
Confidence 356666666666543 12234555556666666553 443222233333 24555555555
No 431
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.25 E-value=0.0018 Score=70.08 Aligned_cols=143 Identities=14% Similarity=0.071 Sum_probs=83.0
Q ss_pred ceecccCceEEEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCC--ceeeEEeE-----EEeCCceEEEEE
Q 002238 599 NILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHR--HLVALLGH-----CLDGNEKLLVFE 671 (948)
Q Consensus 599 ~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~--niv~l~~~-----~~~~~~~~lv~e 671 (948)
..++ |....||+....+|+.+++|+...... ....+..|..+++.+... .+++++.. ...++..++|||
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~---~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~ 107 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPERW---TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFP 107 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTTS---CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEE
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCCC---CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEE
Confidence 4576 888999998877788899998864321 235677788888887422 23444432 122455688999
Q ss_pred ecCCCChh-----------HH---HHhhhhcC----CCCCCHHHH----HHH---------------HHHHHHHHHHHHh
Q 002238 672 YMPQGTLS-----------RH---IFNWAEEG----LKPLEWNRR----LTI---------------ALDVARGVEYLHG 714 (948)
Q Consensus 672 ~~~~gsL~-----------~~---l~~~~~~~----~~~l~~~~~----~~i---------------~~~i~~~l~~LH~ 714 (948)
|++|..+. +. +|...... ....++... ..+ ...+.+.++.+..
T Consensus 108 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 187 (328)
T 1zyl_A 108 SVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTA 187 (328)
T ss_dssp CCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 99885542 11 12111100 112222211 000 1111122333322
Q ss_pred c----cCCCeeecCCCCccEEEcCCCCeEEeecCCce
Q 002238 715 L----AHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 747 (948)
Q Consensus 715 ~----~~~~ivHrDik~~Nill~~~~~~kl~DfGla~ 747 (948)
. ....++|+|+++.||+++ + .+.|+||+.+.
T Consensus 188 ~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~ 222 (328)
T 1zyl_A 188 HWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDAR 222 (328)
T ss_dssp HCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred HhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence 1 235689999999999999 4 89999998765
No 432
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.25 E-value=0.0011 Score=71.95 Aligned_cols=143 Identities=15% Similarity=0.131 Sum_probs=73.9
Q ss_pred ceecccCceE-EEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCC--CceeeEEeEEEeCCceEEEEEecCC
Q 002238 599 NILGRGGFGT-VYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRH--RHLVALLGHCLDGNEKLLVFEYMPQ 675 (948)
Q Consensus 599 ~~lg~G~fg~-Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H--~niv~l~~~~~~~~~~~lv~e~~~~ 675 (948)
+.|+.|+... +|+....+|+.+++|...... ...+..|+++++.+.. -.+.+++.+..+. -++|||++.+
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~-----~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~--g~ll~e~l~~ 96 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEE-----GGDTQPFVDLAQYLRNLDISAPEIYAEEHAR--GLLLIEDLGD 96 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTT-----TCCSHHHHHHHHHHHHTTCBCCCEEEEETTT--TEEEECCCCS
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCC-----CccccHHHHHHHHHHhCCCCCCceeeecCCC--CEEEEeeCCC
Confidence 4566665554 678765447788888654321 1334567777777632 2345666654333 3789999977
Q ss_pred CChhHHHHhhh------------------hc---CCCCCCHHHHH-------H-------------HHHHHHHHHHHHHh
Q 002238 676 GTLSRHIFNWA------------------EE---GLKPLEWNRRL-------T-------------IALDVARGVEYLHG 714 (948)
Q Consensus 676 gsL~~~l~~~~------------------~~---~~~~l~~~~~~-------~-------------i~~~i~~~l~~LH~ 714 (948)
..+.+.+.... .. ....++..... . ....+...++.+..
T Consensus 97 ~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~ 176 (333)
T 3csv_A 97 ALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILS 176 (333)
T ss_dssp CBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred cchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 66654332100 00 01112111100 0 00111122222211
Q ss_pred ---ccCCCeeecCCCCccEEEcCC----CCeEEeecCCcee
Q 002238 715 ---LAHQSFIHRDLKPSNILLGDD----MRAKVADFGLVRL 748 (948)
Q Consensus 715 ---~~~~~ivHrDik~~Nill~~~----~~~kl~DfGla~~ 748 (948)
.....++|||+.+.||+++.+ +.+.|+||+.+..
T Consensus 177 ~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 177 AQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp HHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred hcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 124679999999999999874 6799999998764
No 433
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.19 E-value=8.4e-05 Score=71.54 Aligned_cols=85 Identities=14% Similarity=0.150 Sum_probs=67.0
Q ss_pred CCCCcEEEcccccccCCCCccccCCCCCCEEEccCCC-CCCCCCCccccCC----CCCCEEEccCcc-ccccCCCCCCCC
Q 002238 114 LASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNP-FSSWEIPQSLRNA----SGLQNFSANSAN-ITGQIPSFFGPD 187 (948)
Q Consensus 114 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~p~~~~~l----~~L~~L~l~~n~-l~~~~p~~~~~~ 187 (948)
-.+|+.|||+++.|+..--..+.++++|+.|+|++|. |+. .--..+..+ ++|++|+|++|. ||...-..+.
T Consensus 60 ~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD-~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~-- 136 (176)
T 3e4g_A 60 KYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIED-GCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALH-- 136 (176)
T ss_dssp CCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCH-HHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGG--
T ss_pred CceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCH-HHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHh--
Confidence 3579999999999887666668899999999999996 664 222334444 369999999985 8866555665
Q ss_pred CCCCCcEEEccccc
Q 002238 188 EFPGLTILHLAFNQ 201 (948)
Q Consensus 188 ~l~~L~~L~Ls~N~ 201 (948)
.+++|++|+|+++.
T Consensus 137 ~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 137 HFRNLKYLFLSDLP 150 (176)
T ss_dssp GCTTCCEEEEESCT
T ss_pred cCCCCCEEECCCCC
Confidence 78999999999985
No 434
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.16 E-value=0.00098 Score=71.26 Aligned_cols=74 Identities=12% Similarity=0.148 Sum_probs=46.8
Q ss_pred CcccceecccCceEEEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCce-eeEEeEEEeCCceEEEEEec
Q 002238 595 FSEENILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHL-VALLGHCLDGNEKLLVFEYM 673 (948)
Q Consensus 595 ~~~~~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~lv~e~~ 673 (948)
+.-.+.|+.|....+|+. +.+++|+..... .......+|+.+++.+....+ .+++++ +.+.-++|+||+
T Consensus 20 ~~~i~~l~gG~tN~~~~~-----~~~vlR~~~~~~---~~~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i 89 (301)
T 3dxq_A 20 YTGPLERLGGLTNLVFRA-----GDLCLRIPGKGT---EEYINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYI 89 (301)
T ss_dssp CCSCEEEESCSSEEEEEE-----TTEEEEEECC-------CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECC
T ss_pred ccceeEcCCcccccccee-----eeEEEECCCCCc---cceeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeec
Confidence 333678999999999998 568999875421 111223568888877742222 355543 344457999999
Q ss_pred -CCCCh
Q 002238 674 -PQGTL 678 (948)
Q Consensus 674 -~~gsL 678 (948)
++.++
T Consensus 90 ~~g~~l 95 (301)
T 3dxq_A 90 AGAQTM 95 (301)
T ss_dssp TTCEEC
T ss_pred CCCccC
Confidence 66555
No 435
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.03 E-value=0.002 Score=70.84 Aligned_cols=143 Identities=15% Similarity=0.155 Sum_probs=83.7
Q ss_pred cceecccCceEEEEEEEc--------CCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcC-CCceeeEEeEEEeCCceEE
Q 002238 598 ENILGRGGFGTVYKGELH--------DGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR-HRHLVALLGHCLDGNEKLL 668 (948)
Q Consensus 598 ~~~lg~G~fg~Vy~~~~~--------~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~l 668 (948)
.+.+..|-...+|+.... +++.|++|+... .......+.+|.++++.+. +.-..++++++.+ .+
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~---~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~ 127 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGA---ILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GR 127 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCC---ccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----cc
Confidence 356777888999999864 247899998532 1123456779999998884 3333566666543 39
Q ss_pred EEEecCCCChhH--------------HH---HhhhhcCCCCCC--HHHHHHHHHHHHH-------------------HHH
Q 002238 669 VFEYMPQGTLSR--------------HI---FNWAEEGLKPLE--WNRRLTIALDVAR-------------------GVE 710 (948)
Q Consensus 669 v~e~~~~gsL~~--------------~l---~~~~~~~~~~l~--~~~~~~i~~~i~~-------------------~l~ 710 (948)
||||++|.+|.. .+ |.......+... |.++.++..++.. .++
T Consensus 128 v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 207 (379)
T 3feg_A 128 LEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMG 207 (379)
T ss_dssp EEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHH
T ss_pred EEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHH
Confidence 999999866531 11 110001112222 4555555544322 233
Q ss_pred HHHh-----ccCCCeeecCCCCccEEEcCC----CCeEEeecCCce
Q 002238 711 YLHG-----LAHQSFIHRDLKPSNILLGDD----MRAKVADFGLVR 747 (948)
Q Consensus 711 ~LH~-----~~~~~ivHrDik~~Nill~~~----~~~kl~DfGla~ 747 (948)
.|.. .....++|+|+.+.||+++.+ +.+.++||..+.
T Consensus 208 ~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 208 NLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 3321 123468999999999999876 689999998654
No 436
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.93 E-value=0.0013 Score=60.16 Aligned_cols=55 Identities=15% Similarity=0.376 Sum_probs=38.6
Q ss_pred EEEcccCCCC--CCCCCcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEccCCCCC
Q 002238 96 RLELQWNSIS--GPLPSLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNNPFS 152 (948)
Q Consensus 96 ~L~L~~N~l~--~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 152 (948)
.++.++++|+ .++..+. .+|++|+|++|+|+.++++.|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4555555555 3322222 35778888888888888888888888888888888775
No 437
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.90 E-value=0.002 Score=72.37 Aligned_cols=73 Identities=19% Similarity=0.235 Sum_probs=50.0
Q ss_pred cceecccCceEEEEEEEcC--------CcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCce-eeEEeEEEeCCceEE
Q 002238 598 ENILGRGGFGTVYKGELHD--------GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHL-VALLGHCLDGNEKLL 668 (948)
Q Consensus 598 ~~~lg~G~fg~Vy~~~~~~--------g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~l 668 (948)
.+.|+.|....||++...+ ++.+++|+.... .....+.+|..+++.+...++ .++++.+.+ .+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~----~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~ 149 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP----ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GR 149 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC----CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC----CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CE
Confidence 4568888899999998753 578999987431 111455679999988843333 566665532 38
Q ss_pred EEEecCCCCh
Q 002238 669 VFEYMPQGTL 678 (948)
Q Consensus 669 v~e~~~~gsL 678 (948)
||||++|.++
T Consensus 150 v~e~l~G~~l 159 (429)
T 1nw1_A 150 LEEYIPSRPL 159 (429)
T ss_dssp EECCCCEEEC
T ss_pred EEEEeCCccc
Confidence 9999987444
No 438
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.80 E-value=0.00032 Score=68.88 Aligned_cols=91 Identities=13% Similarity=0.132 Sum_probs=59.1
Q ss_pred CCCCCcEEEcccccccccCCCCcccccccceeccCCCCCCccCCCccccccCCCccEEEccCCcccccC-----CCCCCC
Q 002238 188 EFPGLTILHLAFNQLIGGLPASFSGSQIQSLWVNGQNGNAKLGGGIDVIQNMTSLKEIWLHSNAFSGPL-----PDFSGV 262 (948)
Q Consensus 188 ~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~-----~~~~~l 262 (948)
.-+.|+.|+|++|+|...-...++ +.+..-+.|+.|+|++|.|.... ..+...
T Consensus 68 ~N~~L~~L~L~~n~igd~ga~alA----------------------~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N 125 (197)
T 1pgv_A 68 NSKHIEKFSLANTAISDSEARGLI----------------------ELIETSPSLRVLNVESNFLTPELLARLLRSTLVT 125 (197)
T ss_dssp TCSCCCEEECTTSCCBHHHHTTHH----------------------HHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTT
T ss_pred hCCCcCEEEccCCCCChHHHHHHH----------------------HHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhC
Confidence 345677777777777643333322 33445677888888888887522 235566
Q ss_pred CCCcEEeccCC---cccc----ccchhhhCCCCCcEEEcccCccc
Q 002238 263 KQLESLSLRDN---FFTG----PVPDSLVKLESLKIVNMTNNLLQ 300 (948)
Q Consensus 263 ~~L~~L~L~~N---~l~~----~~p~~l~~l~~L~~L~Ls~N~l~ 300 (948)
+.|+.|+|++| .+.. .+...+..-+.|+.|+++.|.+.
T Consensus 126 ~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 126 QSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp CCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred CceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 77999999865 3332 24456667788999999887654
No 439
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.73 E-value=0.0041 Score=70.23 Aligned_cols=74 Identities=12% Similarity=0.067 Sum_probs=48.5
Q ss_pred cceecccCceEEEEEEEcC-CcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCce-eeEEeEEEeCCceEEEEEecCC
Q 002238 598 ENILGRGGFGTVYKGELHD-GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHL-VALLGHCLDGNEKLLVFEYMPQ 675 (948)
Q Consensus 598 ~~~lg~G~fg~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~lv~e~~~~ 675 (948)
.+.|+.|-...+|+....+ +..+++|+..... ...-...+|..+++.+...++ .++++++. + .+||||++|
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~---~~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G 185 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKT---DEIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDG 185 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-C---CSCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCS
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCCh---hhhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCC
Confidence 4568888899999998764 4789999864321 111123689999999965444 46776652 2 359999987
Q ss_pred CCh
Q 002238 676 GTL 678 (948)
Q Consensus 676 gsL 678 (948)
.+|
T Consensus 186 ~~l 188 (458)
T 2qg7_A 186 YAL 188 (458)
T ss_dssp EEC
T ss_pred ccC
Confidence 554
No 440
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.59 E-value=0.0048 Score=67.98 Aligned_cols=74 Identities=15% Similarity=0.108 Sum_probs=44.9
Q ss_pred cceecccCceEEEEEEEcC---------CcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCc-eeeEEeEEEeCCceE
Q 002238 598 ENILGRGGFGTVYKGELHD---------GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRH-LVALLGHCLDGNEKL 667 (948)
Q Consensus 598 ~~~lg~G~fg~Vy~~~~~~---------g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~n-iv~l~~~~~~~~~~~ 667 (948)
.+.++.|....+|+....+ ++.+++|+.... .........|.++++.+.... ..++++.. . -+
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~---~~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~ 110 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKH---VDELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GG 110 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTT---GGGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TE
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCC---ccceecHHHHHHHHHHHHhcCCCCceEEec--C--Cc
Confidence 3567888889999998754 268899976542 111123467888888884323 34566443 2 37
Q ss_pred EEEEecCCCCh
Q 002238 668 LVFEYMPQGTL 678 (948)
Q Consensus 668 lv~e~~~~gsL 678 (948)
+||||++|..+
T Consensus 111 ~v~e~i~G~~l 121 (369)
T 3c5i_A 111 RIEEWLYGDPL 121 (369)
T ss_dssp EEEECCCSEEC
T ss_pred EEEEEecCCcC
Confidence 89999987544
No 441
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.49 E-value=0.0092 Score=64.76 Aligned_cols=32 Identities=22% Similarity=0.427 Sum_probs=27.9
Q ss_pred CCCeeecCCCCccEEEcCCCCeEEeecCCcee
Q 002238 717 HQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 748 (948)
Q Consensus 717 ~~~ivHrDik~~Nill~~~~~~kl~DfGla~~ 748 (948)
...++|+|+.+.||+++.++.+.|+||+.+..
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 35799999999999999888899999987653
No 442
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.45 E-value=0.00035 Score=68.56 Aligned_cols=66 Identities=14% Similarity=0.188 Sum_probs=38.2
Q ss_pred cccCCCCCcEEEcccC-CCCCC-----CCCcCCCCCCcEEEcccccccC----CCCccccCCCCCCEEEccCCCCC
Q 002238 87 NLQNLTKLERLELQWN-SISGP-----LPSLNGLASLEVVMLSNNQFTS----VPSDFFTGLSSLQSIEIDNNPFS 152 (948)
Q Consensus 87 ~l~~l~~L~~L~L~~N-~l~~~-----~p~~~~l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l~ 152 (948)
.+.+-+.|++|+|++| .|... ...+..-+.|+.|+|++|+|.. .+.+++..-+.|+.|+|++|+|.
T Consensus 36 ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 36 LREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp HHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred HHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 3455667788888774 66431 1134455667777777777663 22333445566666666666665
No 443
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.22 E-value=0.0069 Score=55.35 Aligned_cols=56 Identities=18% Similarity=0.168 Sum_probs=46.5
Q ss_pred cEEEccCCccc--ccCCCCCCCCCCcEEeccCCccccccchhhhCCCCCcEEEcccCccc
Q 002238 243 KEIWLHSNAFS--GPLPDFSGVKQLESLSLRDNFFTGPVPDSLVKLESLKIVNMTNNLLQ 300 (948)
Q Consensus 243 ~~L~Ls~N~l~--~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 300 (948)
..++.+++.++ ..+..+. .+|+.|+|++|+|+..-+..|..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 47899999998 5443443 57999999999999766778899999999999999885
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.87 E-value=0.024 Score=62.45 Aligned_cols=145 Identities=16% Similarity=0.157 Sum_probs=82.7
Q ss_pred ceecccCceEEEEEEEcC--------CcEEEEEEeecCcCC---------hhh-------HHHHHHHHHHHHhcC-CCce
Q 002238 599 NILGRGGFGTVYKGELHD--------GTKIAVKRMEAGVIS---------GKG-------LTEFKSEIAVLTKVR-HRHL 653 (948)
Q Consensus 599 ~~lg~G~fg~Vy~~~~~~--------g~~vavK~~~~~~~~---------~~~-------~~~~~~E~~~l~~l~-H~ni 653 (948)
+.|..|-...+|++...+ +..|.+++.-..... .-. ......|..+++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456678889999998753 368888876432100 000 112335888888884 4445
Q ss_pred eeEEeEEEeCCceEEEEEecCCCChhH--------------HHHhhhhc---CCCCCC--HHHHHHHHHHHH--------
Q 002238 654 VALLGHCLDGNEKLLVFEYMPQGTLSR--------------HIFNWAEE---GLKPLE--WNRRLTIALDVA-------- 706 (948)
Q Consensus 654 v~l~~~~~~~~~~~lv~e~~~~gsL~~--------------~l~~~~~~---~~~~l~--~~~~~~i~~~i~-------- 706 (948)
.++++++.. .+|+||++|-+|.. .+...... ..+... |.+..++..++.
T Consensus 138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 567766543 29999999765521 11111111 112222 334444443321
Q ss_pred --------------HHHH----HHHhc-cCCCeeecCCCCccEEEcCC------CCeEEeecCCce
Q 002238 707 --------------RGVE----YLHGL-AHQSFIHRDLKPSNILLGDD------MRAKVADFGLVR 747 (948)
Q Consensus 707 --------------~~l~----~LH~~-~~~~ivHrDik~~Nill~~~------~~~kl~DfGla~ 747 (948)
.-+. +|... .+..++|+|+.+.||+++.+ +.+.++||..+.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 1122 22221 23468899999999999876 789999998654
No 445
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=95.85 E-value=0.067 Score=52.64 Aligned_cols=101 Identities=14% Similarity=0.115 Sum_probs=65.5
Q ss_pred ChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCCccEEEcCCCCeEEeecCCceecCCCCCce
Q 002238 677 TLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSI 756 (948)
Q Consensus 677 sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~~~~~~~~~~ 756 (948)
+|.++|..+ ..++++.++|.++.|.+.+|.-+-... .+ ..+=+.|..|++..+|.|...+ +.+.
T Consensus 34 SL~eIL~~~----~~PlsEEqaWALc~Qc~~~L~~~~~~~-~~-~~~i~~~~~i~l~~dG~V~f~~-~~s~--------- 97 (229)
T 2yle_A 34 SLEEILRLY----NQPINEEQAWAVCYQCCGSLRAAARRR-QP-RHRVRSAAQIRVWRDGAVTLAP-AADD--------- 97 (229)
T ss_dssp EHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHTT-CC-CCCCCSGGGEEEETTSCEEECC-C------------
T ss_pred cHHHHHHHc----CCCcCHHHHHHHHHHHHHHHHhhhhcc-cC-CceecCCcceEEecCCceeccc-cccc---------
Confidence 788888543 368999999999999999987762111 11 1333457899999999998863 1110
Q ss_pred eeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCC
Q 002238 757 ETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRK 798 (948)
Q Consensus 757 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~ 798 (948)
.....+.|||... ...+.+.=|||+|+++|.-+--..
T Consensus 98 ----~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL 134 (229)
T 2yle_A 98 ----AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGL 134 (229)
T ss_dssp -------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTC
T ss_pred ----ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCC
Confidence 0123466888753 455788899999999999986433
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.38 E-value=0.051 Score=60.44 Aligned_cols=142 Identities=12% Similarity=0.154 Sum_probs=84.9
Q ss_pred cceecccCceEEEEEEEcC--------CcEEEEEEeecCcCChhhHHHHHHHHHHHHhcC-CCceeeEEeEEEeCCceEE
Q 002238 598 ENILGRGGFGTVYKGELHD--------GTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVR-HRHLVALLGHCLDGNEKLL 668 (948)
Q Consensus 598 ~~~lg~G~fg~Vy~~~~~~--------g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~l 668 (948)
.+.+..|-...+|+....+ ++.|++|+.... . ...-+..+|.++++.+. +.-..++++.+ . -++
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~--t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~ 147 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKH--V-GKFYDSKVELDVFRYLSNINIAPNIIADF--P--EGR 147 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCC--C--CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCC--c-chhcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCE
Confidence 4567778889999998763 588999986432 1 11223467888888884 32234555433 2 378
Q ss_pred EEEecCCCChhH-----------------HHHhhhh-----c---CCCCCCHHHHHHHHHHH------------------
Q 002238 669 VFEYMPQGTLSR-----------------HIFNWAE-----E---GLKPLEWNRRLTIALDV------------------ 705 (948)
Q Consensus 669 v~e~~~~gsL~~-----------------~l~~~~~-----~---~~~~l~~~~~~~i~~~i------------------ 705 (948)
||||++|..|.. .+|.... . ...+.-|.++.++..++
T Consensus 148 I~efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~ 227 (424)
T 3mes_A 148 IEEFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSK 227 (424)
T ss_dssp EEECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHH
T ss_pred EEEEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHH
Confidence 999999876421 1111111 0 11222344444443322
Q ss_pred -HHHHHHHHh---------------------ccCCCeeecCCCCccEEEcCCCCeEEeecCCce
Q 002238 706 -ARGVEYLHG---------------------LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 747 (948)
Q Consensus 706 -~~~l~~LH~---------------------~~~~~ivHrDik~~Nill~~~~~~kl~DfGla~ 747 (948)
...++.|.. ..+..++|+|+.+.||+ +.++.+.++||..+.
T Consensus 228 l~~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~ 290 (424)
T 3mes_A 228 ILEEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSA 290 (424)
T ss_dssp HHHHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred HHHHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCC
Confidence 222333321 11346889999999999 778899999998764
No 447
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=89.63 E-value=0.25 Score=34.74 Aligned_cols=25 Identities=8% Similarity=0.219 Sum_probs=13.1
Q ss_pred hhhHhHhHHHHHHHHHHhhhhhhhc
Q 002238 492 ILFCVIGGAFVISLTGVLVFCLCKK 516 (948)
Q Consensus 492 ~~~~v~~~~~~~~~~~~l~~~~~~~ 516 (948)
++.++++++++++++++.++++.|+
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RR 37 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRR 37 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhh
Confidence 5566666666555554444444333
No 448
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=89.31 E-value=0.29 Score=34.27 Aligned_cols=27 Identities=30% Similarity=0.592 Sum_probs=14.7
Q ss_pred ehhhHhHhHHHHHHHHHHhhhhhhhcc
Q 002238 491 VILFCVIGGAFVISLTGVLVFCLCKKK 517 (948)
Q Consensus 491 ~~~~~v~~~~~~~~~~~~l~~~~~~~~ 517 (948)
.++.+++++++++++++..++++.|++
T Consensus 11 aIA~gVVgGv~~v~ii~~~~~~~~RRR 37 (44)
T 2l2t_A 11 LIAAGVIGGLFILVIVGLTFAVYVRRK 37 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred eEEEeehHHHHHHHHHHHHHHHHhhhh
Confidence 356667766666555554444444433
No 449
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=88.81 E-value=1.5 Score=48.31 Aligned_cols=29 Identities=31% Similarity=0.518 Sum_probs=24.0
Q ss_pred CeeecCCCCccEEE------cCCCCeEEeecCCce
Q 002238 719 SFIHRDLKPSNILL------GDDMRAKVADFGLVR 747 (948)
Q Consensus 719 ~ivHrDik~~Nill------~~~~~~kl~DfGla~ 747 (948)
.++|+|+.+.||++ +++..++++||-.|.
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~ 279 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence 36799999999999 445679999998765
No 450
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=85.12 E-value=0.097 Score=59.09 Aligned_cols=63 Identities=10% Similarity=0.054 Sum_probs=18.1
Q ss_pred ccceecccCceEEEEEEEcC-CcEEEE------EEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeEEEe
Q 002238 597 EENILGRGGFGTVYKGELHD-GTKIAV------KRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGHCLD 662 (948)
Q Consensus 597 ~~~~lg~G~fg~Vy~~~~~~-g~~vav------K~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 662 (948)
..+.|| ||.||+|.+.. ..+||| |..+...........+.+|..+++.++|||+++.+++...
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 345666 99999998863 367888 7766544445555678999999999999999998877653
No 451
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=81.30 E-value=0.95 Score=31.63 Aligned_cols=26 Identities=23% Similarity=0.526 Sum_probs=10.9
Q ss_pred hhhHhHhHHHHHHHHH-Hhhhhhhhccc
Q 002238 492 ILFCVIGGAFVISLTG-VLVFCLCKKKQ 518 (948)
Q Consensus 492 ~~~~v~~~~~~~~~~~-~l~~~~~~~~~ 518 (948)
++.++++ ++++++++ +++++++|+++
T Consensus 14 Ia~~vVG-vll~vi~~l~~~~~~RRR~~ 40 (44)
T 2jwa_A 14 IISAVVG-ILLVVVLGVVFGILIKRRQQ 40 (44)
T ss_dssp HHHHHHH-HHHHHHHHHHHHHHHHHHCS
T ss_pred hHHHHHH-HHHHHHHHHHHHhheehhhh
Confidence 4445555 33333333 33444444443
No 452
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=77.90 E-value=4.2 Score=40.02 Aligned_cols=114 Identities=12% Similarity=0.102 Sum_probs=75.5
Q ss_pred CCCceeeEEeEEEeCCceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHH-HHHhccCCCeeecCCCC
Q 002238 649 RHRHLVALLGHCLDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVE-YLHGLAHQSFIHRDLKP 727 (948)
Q Consensus 649 ~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~-~LH~~~~~~ivHrDik~ 727 (948)
.||++ -...-.+++.+.+.|+.-+++.=...+ +.++...+++++.+|+...+ ++++ -+|--+.|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i--------~~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P 112 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI--------RKTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCP 112 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH--------HTSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH--------HhcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeC
Confidence 67887 223446677777777765333222223 35678889999999988877 6653 57788999
Q ss_pred ccEEEcCCCCeEEeecCCceecCCCCCceeeeecccccccCceecccCCCCchhhH-HHHHHHHHHHHhCCCCCC
Q 002238 728 SNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDV-FSFGVILMELITGRKALD 801 (948)
Q Consensus 728 ~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv-~s~Gv~l~elltg~~p~~ 801 (948)
+|++++.++.+++.-.|+- +-++|.-+ + ..|. -.+=+++..++.++..|+
T Consensus 113 ~NL~f~~~~~p~i~hRGi~------------------~~lpP~e~-----~-ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 113 ENLMFNRALEPFFLHVGVK------------------ESLPPDEW-----D-DERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp GGEEECTTCCEEESCCEET------------------TTBSSCSC-----C-HHHHHHHHHHHHHHHTTCSSCHH
T ss_pred ceEEEeCCCcEEEEEcCCc------------------ccCCCCCC-----C-HHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999999866642 22333321 1 2233 356678888888877663
No 453
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=75.42 E-value=3.5 Score=40.45 Aligned_cols=115 Identities=12% Similarity=0.137 Sum_probs=77.4
Q ss_pred CCCceeeEEeEEEeCCceEEEEEecCCC-ChhHHHHhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeeecCCCC
Q 002238 649 RHRHLVALLGHCLDGNEKLLVFEYMPQG-TLSRHIFNWAEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKP 727 (948)
Q Consensus 649 ~H~niv~l~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivHrDik~ 727 (948)
.||++++. .+-.+++.+.+.|+.-+.+ ++.. + +..+...+++++.+|+...+++++ =+|--+.|
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-i--------k~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P 107 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-I--------KSFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAP 107 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-G--------GGSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-H--------HhcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEec
Confidence 68888876 4555666666666654322 2221 2 457788899999999998877664 46788999
Q ss_pred ccEEEcCCCCeEEeecCCceecCCCCCceeeeecccccccCceecccCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 002238 728 SNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALD 801 (948)
Q Consensus 728 ~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~ 801 (948)
+|++++.++.+++.-.|+-.. ++|. ..+...=.-.+=+++..+++++..|.
T Consensus 108 ~NL~f~~~~~p~i~~RGik~~------------------l~P~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 108 DELFFTRDGLPIAKTRGLQNV------------------VDPL-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp GGEEECTTSCEEESCCEETTT------------------BSCC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred ceEEEcCCCCEEEEEccCccC------------------CCCC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 999999999999986664221 2222 11222223456788889999887774
No 454
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=51.12 E-value=14 Score=28.05 Aligned_cols=21 Identities=10% Similarity=0.385 Sum_probs=8.9
Q ss_pred HHHHHHHHhhh-hh-hhcccccc
Q 002238 501 FVISLTGVLVF-CL-CKKKQKRF 521 (948)
Q Consensus 501 ~~~~~~~~l~~-~~-~~~~~kr~ 521 (948)
.+++++++..| |. |++++++.
T Consensus 19 ~lll~~glcI~ccvkcrhRrrqA 41 (70)
T 2klu_A 19 GLLLFIGLGIFFSVRSRHRRRQA 41 (70)
T ss_dssp HHHHHHHHHHHHHHHSSCCSSSC
T ss_pred HHHHHHHHHHHHhhHHHHHHHHH
Confidence 34444444444 33 44444443
No 455
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=48.26 E-value=15 Score=24.82 Aligned_cols=20 Identities=10% Similarity=0.017 Sum_probs=7.3
Q ss_pred HhHhHHHHHHHHHHhhhhhh
Q 002238 495 CVIGGAFVISLTGVLVFCLC 514 (948)
Q Consensus 495 ~v~~~~~~~~~~~~l~~~~~ 514 (948)
++++.+..+.+++.+.++++
T Consensus 16 iVvG~v~gv~li~~l~~~~~ 35 (38)
T 2k1k_A 16 VIFGLLLGAALLLGILVFRS 35 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred eehHHHHHHHHHHHHHHHHe
Confidence 33333333333333333333
No 456
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=47.79 E-value=12 Score=25.79 Aligned_cols=10 Identities=20% Similarity=0.119 Sum_probs=4.0
Q ss_pred hhHhHhHHHH
Q 002238 493 LFCVIGGAFV 502 (948)
Q Consensus 493 ~~~v~~~~~~ 502 (948)
+.++++++.+
T Consensus 16 ~~~vv~Gv~l 25 (41)
T 2k9y_A 16 IGGVAVGVVL 25 (41)
T ss_dssp HHHHHHHHHH
T ss_pred EeehhHHHHH
Confidence 3344444333
No 457
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=43.56 E-value=1.2e+02 Score=31.73 Aligned_cols=137 Identities=14% Similarity=0.125 Sum_probs=71.0
Q ss_pred ceecccCceEEEEEEEcCCcEEEEEEeecCcCChhhHHHHHHHHHHHHhcCCCceeeEEeE--------------E----
Q 002238 599 NILGRGGFGTVYKGELHDGTKIAVKRMEAGVISGKGLTEFKSEIAVLTKVRHRHLVALLGH--------------C---- 660 (948)
Q Consensus 599 ~~lg~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~--------------~---- 660 (948)
+..-.|. +.||.+.. ++..|+||-. +....+.+-.++...-.+.-|+..-+.-. .
T Consensus 75 ~~s~~Gs-tgvff~~t-d~~~~VVK~s-----~~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~~~ 147 (342)
T 1cja_A 75 ERSEKGT-EGLFFVET-ESGVFIVKRS-----TNIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKSFR 147 (342)
T ss_dssp EECCSTT-SCEEEEEE-SSCEEEEECC-----TTHHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSSSC
T ss_pred EeccCCC-CCeEEEEe-CCCEEEEeCc-----HHHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhhhH
Confidence 3444554 55555555 4889999943 12223445555555555666664322211 0
Q ss_pred ----EeCCceEEEEEecCCCChhHHHHhhhhcCCCCCCHHHHHHHHHHH--HHHHHHHHhcc-CCCeee-cCCCCccEEE
Q 002238 661 ----LDGNEKLLVFEYMPQGTLSRHIFNWAEEGLKPLEWNRRLTIALDV--ARGVEYLHGLA-HQSFIH-RDLKPSNILL 732 (948)
Q Consensus 661 ----~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i--~~~l~~LH~~~-~~~ivH-rDik~~Nill 732 (948)
......+++|||.+|..|.+.-+.... ..+.. +.+.++ +-++.++.... ..+.+. .--.+.|||+
T Consensus 148 ~l~~l~~~~~~l~meyv~G~~L~e~~~~~~~---~~f~~----~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~ 220 (342)
T 1cja_A 148 VITTLANQANILLMELVRGITLNKLTTTSAP---EVLTK----STMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIML 220 (342)
T ss_dssp HHHHHTTCSEEEEEECCCEEESTTCCSSSHH---HHSCH----HHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEE
T ss_pred HHHHhhcccceehhhhcCCCccccchhhhhh---hhcCH----HHHHhhchhheehhhhcCCccCcccccCCCChhheEE
Confidence 012246799999998776532211000 01221 222332 33455555322 122222 1257899999
Q ss_pred cCCCC-eEEeecCCceec
Q 002238 733 GDDMR-AKVADFGLVRLA 749 (948)
Q Consensus 733 ~~~~~-~kl~DfGla~~~ 749 (948)
++++. +.++|-+.+...
T Consensus 221 ~~~n~~~~~IDhn~af~~ 238 (342)
T 1cja_A 221 SERGATVVPIDSKIIPLD 238 (342)
T ss_dssp ESBTTCEEECSCCCCCCC
T ss_pred eCCCCeEEEEcCCccccC
Confidence 87554 889999988653
No 458
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=42.80 E-value=29 Score=24.31 Aligned_cols=32 Identities=19% Similarity=0.043 Sum_probs=18.7
Q ss_pred eeehhhHhHhHHHHHHHHHHhhhhhhhccccc
Q 002238 489 ITVILFCVIGGAFVISLTGVLVFCLCKKKQKR 520 (948)
Q Consensus 489 ~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~kr 520 (948)
+...+++.+.++++++++.++++-.++.++||
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RRr~~~~kR 44 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRRRHIVRKR 44 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHTTTCCSCC
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhhhHhhccC
Confidence 34444444445555556667777777776654
No 459
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=41.11 E-value=11 Score=24.97 Aligned_cols=18 Identities=22% Similarity=0.434 Sum_probs=8.4
Q ss_pred ehhhHhHhHHHHHHHHHHh
Q 002238 491 VILFCVIGGAFVISLTGVL 509 (948)
Q Consensus 491 ~~~~~v~~~~~~~~~~~~l 509 (948)
.++.++++ ++++++++..
T Consensus 9 sIaagVvg-lll~vii~l~ 26 (35)
T 1iij_A 9 FIIATVVG-VLLFLILVVV 26 (35)
T ss_dssp HHHHHHHH-HHHHHHHTTT
T ss_pred EeHHHHHH-HHHHHHHHHH
Confidence 35555555 4444444333
No 460
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=38.39 E-value=27 Score=24.46 Aligned_cols=32 Identities=19% Similarity=0.022 Sum_probs=19.9
Q ss_pred eeehhhHhHhHHHHHHHHHHhhhhhhhccccc
Q 002238 489 ITVILFCVIGGAFVISLTGVLVFCLCKKKQKR 520 (948)
Q Consensus 489 ~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~kr 520 (948)
+...+++.+.+++++++..++++-.++.++||
T Consensus 12 IA~gVVgGv~~v~ii~~~~~~~~RRRr~~~kr 43 (44)
T 2l2t_A 12 IAAGVIGGLFILVIVGLTFAVYVRRKSIKKKR 43 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCC
T ss_pred EEEeehHHHHHHHHHHHHHHHHhhhhhhhhcc
Confidence 44455554455555666777777777777665
No 461
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=31.39 E-value=1.1e+02 Score=25.73 Aligned_cols=47 Identities=11% Similarity=0.247 Sum_probs=25.5
Q ss_pred cccCCCCccccCCCCCCEEEccCCCCCCCCCCccccCCCCCCEEEccCc
Q 002238 126 QFTSVPSDFFTGLSSLQSIEIDNNPFSSWEIPQSLRNASGLQNFSANSA 174 (948)
Q Consensus 126 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n 174 (948)
.++.+...+|.++++|+.+.|..+ ++. --..+|.++.+|+.+.+...
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~-Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGL-LYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSC-CCTTSSTTCTTCCCEEECCS
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hhe-EcHHHHhccCCccEEEEcCC
Confidence 445555556666666666666554 221 11345556666666666543
No 462
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=29.72 E-value=61 Score=27.21 Aligned_cols=39 Identities=13% Similarity=0.313 Sum_probs=25.3
Q ss_pred CcCCCCCCcEEEcccccccCCCCccccCCCCCCEEEccCC
Q 002238 110 SLNGLASLEVVMLSNNQFTSVPSDFFTGLSSLQSIEIDNN 149 (948)
Q Consensus 110 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 149 (948)
+|.++++|+.+.|..+ ++.+-..+|.++.+|+.+.+...
T Consensus 15 aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 15 LFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp TTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred HhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 4666666666666643 55566666777777777777654
No 463
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=28.10 E-value=3.5e+02 Score=30.88 Aligned_cols=86 Identities=14% Similarity=0.158 Sum_probs=51.0
Q ss_pred eeEEeEEEeCCceEEEEEecCCCChhHHHH----------hhhhcCCCC--CCHHHHHHHHHHHHH--HHHHHHhccCCC
Q 002238 654 VALLGHCLDGNEKLLVFEYMPQGTLSRHIF----------NWAEEGLKP--LEWNRRLTIALDVAR--GVEYLHGLAHQS 719 (948)
Q Consensus 654 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~----------~~~~~~~~~--l~~~~~~~i~~~i~~--~l~~LH~~~~~~ 719 (948)
++.+.+...+...-+ .|++++.++.+.+. ......... ..|..+..++..+|- .+.|+= |
T Consensus 402 i~~Y~Vipls~~~Gl-IE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YIL-----G 475 (614)
T 3ls8_A 402 LTPYKVLATSTKHGF-MQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYIL-----G 475 (614)
T ss_dssp CCCCCEEESSSSEEE-EECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHH-----T
T ss_pred eeccEEEEecCCCce-EEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheee-----e
Confidence 344455555544444 57887765555442 211111111 235555556555443 455664 3
Q ss_pred eeecCCCCccEEEcCCCCeEEeecCCce
Q 002238 720 FIHRDLKPSNILLGDDMRAKVADFGLVR 747 (948)
Q Consensus 720 ivHrDik~~Nill~~~~~~kl~DfGla~ 747 (948)
| +|=.++|||++.+|++.=+|||...
T Consensus 476 i--gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 476 V--GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp C--CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred c--cCCCCcceeEcCCCCEeeeehHHhh
Confidence 3 6888999999999999999999763
No 464
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=28.00 E-value=45 Score=24.42 Aligned_cols=22 Identities=23% Similarity=0.401 Sum_probs=11.2
Q ss_pred eehhhHhHhHHHHHHHHHHhhh
Q 002238 490 TVILFCVIGGAFVISLTGVLVF 511 (948)
Q Consensus 490 ~~~~~~v~~~~~~~~~~~~l~~ 511 (948)
.+++.++++++++++++.++.|
T Consensus 10 WiIi~svl~GLLLL~Lii~~Lw 31 (54)
T 2l8s_A 10 WVILLSAFAGLLLLMLLILALW 31 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3455566666555544444433
No 465
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=27.06 E-value=70 Score=23.46 Aligned_cols=22 Identities=18% Similarity=0.447 Sum_probs=11.2
Q ss_pred eehhhHhHhHHHHHHHHHHhhh
Q 002238 490 TVILFCVIGGAFVISLTGVLVF 511 (948)
Q Consensus 490 ~~~~~~v~~~~~~~~~~~~l~~ 511 (948)
.+++.+++++++++.++.++.|
T Consensus 13 wiIi~svl~GLllL~li~~~Lw 34 (54)
T 2knc_A 13 WWVLVGVLGGLLLLTILVLAMW 34 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4455556666555544444433
No 466
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=24.32 E-value=65 Score=24.44 Aligned_cols=29 Identities=21% Similarity=0.138 Sum_probs=11.8
Q ss_pred hhhHhHhHHHHHHHHHH--hhhhhhhccccc
Q 002238 492 ILFCVIGGAFVISLTGV--LVFCLCKKKQKR 520 (948)
Q Consensus 492 ~~~~v~~~~~~~~~~~~--l~~~~~~~~~kr 520 (948)
++.++++.++++.++.+ +-++.++++..|
T Consensus 13 vlGg~~~lll~~glcI~ccvkcrhRrrqAeR 43 (70)
T 2klu_A 13 VLGGVAGLLLFIGLGIFFSVRSRHRRRQAER 43 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSSCCSSSCTT
T ss_pred HHhHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 33444444444333322 224455444433
Done!