BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002241
(948 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359495648|ref|XP_002265379.2| PREDICTED: chromosome transmission fidelity protein 18 homolog
[Vitis vinifera]
Length = 948
Score = 1213 bits (3139), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 619/962 (64%), Positives = 740/962 (76%), Gaps = 31/962 (3%)
Query: 3 MDMDMHIPLPEELELLEAN---YQDLDPPEQDPDPPEPVPPD-----------SLPLEIN 48
MD +M+IPLPEELE LEAN +QDL+ E P + S P ++N
Sbjct: 1 MDANMYIPLPEELEWLEANSHLHQDLEDYEDQEPPEPYPEEEEEQLPEPPSPLSQP-QVN 59
Query: 49 GHKRPRSDTPKSPIDVDEPQFDEKRSRIVDNDDEDWLRYSPPPPQARD-DARVEVEEKFV 107
G KRP SD P +P + D + +EDWLRYS P D + V EE+ V
Sbjct: 60 GQKRPLSDGPDAPDSGKRSKADLSET----GAEEDWLRYSLPQDSDGDLEPMVVDEERIV 115
Query: 108 SRYASEIDGDCLPVTAPSGGDRVYVKISSSGVEERVKKLDVRAHSNSLTSEPIDVLLQKV 167
SRYASEIDGDC+PVT P GGDRVY+KIS++G + R+KKLD+ + L EPI VL+Q+V
Sbjct: 116 SRYASEIDGDCIPVTGP-GGDRVYLKISATGSDGRLKKLDLEGRTKGLILEPISVLMQRV 174
Query: 168 EQEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQ 227
EQ+AF KAL +SSE Q+D LPE VV+EQLWVDKY+P+SFTELLSDEQTNREVLLWLKQ
Sbjct: 175 EQDAFTKALQASSELQNDAILPETQVVNEQLWVDKYSPSSFTELLSDEQTNREVLLWLKQ 234
Query: 228 WDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEY 287
WDSCVFGSEIRST+EEVLSALRRHS+I+Q+++ + S RKN+G R S+GN R SNNL+
Sbjct: 235 WDSCVFGSEIRSTTEEVLSALRRHSSIAQHQRPSGMSLHRKNKGQRLSDGNSRYSNNLDQ 294
Query: 288 ENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDD 347
EN N KG+Q+ W+KK+R TGPPEQK+LLLCGPPGLGKTTLAHVAAKHCGY VVE+NASDD
Sbjct: 295 ENGNLKGLQELWNKKSRGTGPPEQKILLLCGPPGLGKTTLAHVAAKHCGYRVVEINASDD 354
Query: 348 RSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTA 407
RSSSTIE KILDVVQMNSVMADS+P CLVIDEIDGAL DGKGAVEVILKMVS ERK++
Sbjct: 355 RSSSTIEAKILDVVQMNSVMADSKPNCLVIDEIDGALSDGKGAVEVILKMVSTERKADNR 414
Query: 408 KENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRV 467
K NVAK D+ +IS KKG K ASL RPVICICNDLYAPALR LRQ+AKVH+F+QP+VSRV
Sbjct: 415 KGNVAKVDESGQISSKKGHKTASLSRPVICICNDLYAPALRPLRQVAKVHIFVQPTVSRV 474
Query: 468 VSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGR 527
VSRLK+ICN E +KT+S AL LAEYTECDIRSCLNTLQFL+KK + LNV +I SQVVG+
Sbjct: 475 VSRLKYICNMEGLKTNSTALAALAEYTECDIRSCLNTLQFLNKKNQTLNVFEISSQVVGQ 534
Query: 528 KDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHEN 587
KDMSRS FDIWKEIFQ RK KR + S + S +SN FDFL+ LISNRGDYD+I DGIHEN
Sbjct: 535 KDMSRSIFDIWKEIFQDRKMKRAKRSDNCCSGMSNGFDFLYPLISNRGDYDLILDGIHEN 594
Query: 588 ILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKP 647
I QL YHDP+M KTVKCL+ LG SDL+HQY+MRTQQM L VYQP AI++HRL++Q+QKP
Sbjct: 595 IFQLHYHDPIMQKTVKCLNTLGISDLVHQYVMRTQQMSLNVYQPLTAISLHRLIAQVQKP 654
Query: 648 NLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLR 707
+EWPKS+ RYR FMEK DI +SWH+KI PYISRHLS +S VEDS+SPLLHILSPPTLR
Sbjct: 655 IIEWPKSFMRYRTTFMEKRDILRSWHNKIAPYISRHLSIKSFVEDSVSPLLHILSPPTLR 714
Query: 708 PVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINE 767
PVALHLLS +E+NDLAQL++AMVS+S+TYKN KSDPL +E + D +LSFDPPI +
Sbjct: 715 PVALHLLSERERNDLAQLINAMVSFSITYKNMKSDPLPGTQLHEAASDGLSLSFDPPIAD 774
Query: 768 FITFKGYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADG-YKENMDLAGEEDSK 826
F+TFKG+ HY L +AVKQ+L+HE+EK++I+Q ++ K+ H DG +EN + EE S+
Sbjct: 775 FVTFKGFSLGHYALGVAVKQLLMHEIEKKKILQGSMSKTMHSTDGKRRENWAMTTEEKSR 834
Query: 827 TESAKTNNAAVSAK-LIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKK 885
+S ++AA A+ IE +KS STS V + S S+ ASVK KSS D KK
Sbjct: 835 AQSGNVSHAAGCAENNIETAKS-------KASTSIVSSASGSCGSAEASVKLKSSRDVKK 887
Query: 886 SFRSSSSFFDRFRKLSGKVSQDNDNAVQKATVERDSLPLLFKFNEGFTNAVKRPVRMRDF 945
R S+FFDRF+KLS K SQ + + T+ERDS PLLFKFNEGFTNAVKRPV++R+F
Sbjct: 888 PPR-GSTFFDRFKKLSSKGSQTTNLIQEPVTLERDSRPLLFKFNEGFTNAVKRPVQIREF 946
Query: 946 LL 947
LL
Sbjct: 947 LL 948
>gi|255554168|ref|XP_002518124.1| chromosome transmission fidelity factor, putative [Ricinus
communis]
gi|223542720|gb|EEF44257.1| chromosome transmission fidelity factor, putative [Ricinus
communis]
Length = 813
Score = 1134 bits (2933), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 573/808 (70%), Positives = 656/808 (81%), Gaps = 24/808 (2%)
Query: 5 MDMHIPLPEELELLEAN--YQDLD---------PPEQDPDPPEPVPPDSLPLEING-HKR 52
MDM IP PEELE LE+N +Q+ D PP++D P + KR
Sbjct: 1 MDMDIPDPEELEWLESNSHFQEEDHSDYNSYPYPPDEDLKPQQQQESPPHSPSSPPPRKR 60
Query: 53 PRSDTPKSPI--DVDEPQFDEKRSRIVDND---DEDWLRYSPPPP---QARDDARVEVEE 104
RSD P SPI ++D DEKRS+I D + DEDWLRYSPPPP Q + V VEE
Sbjct: 61 LRSDGPGSPIHENIDSIASDEKRSKIDDVEQEVDEDWLRYSPPPPPPPQEVERMEVAVEE 120
Query: 105 KFVSRYASEIDGDCLPVTAPSGGDRVYVKISSSGVEERVKKLDVRAHSNSLTSEPIDVLL 164
K +S+Y SEIDGD +P+TAPSGGDRVY KI EER+KKLD+++ SN L SEP++VLL
Sbjct: 121 KIISKYISEIDGDFIPITAPSGGDRVYAKICRVETEERLKKLDMKSQSNGLISEPVNVLL 180
Query: 165 QKVEQEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLW 224
Q++EQEAF KAL++SSEGQ+D L ++HEQLWVDKYAPNSFTELLSDEQTNREVLLW
Sbjct: 181 QRMEQEAFTKALHASSEGQADVVLTGTEMMHEQLWVDKYAPNSFTELLSDEQTNREVLLW 240
Query: 225 LKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNN 284
LKQWDSCVFGSEIRSTS+++LS+LRRHST+SQ++K + S+F R+ +G+ W+NGNFR+SN+
Sbjct: 241 LKQWDSCVFGSEIRSTSDDILSSLRRHSTVSQHQKLSHSNFPRRIKGHGWTNGNFRHSNS 300
Query: 285 LEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNA 344
L+ ENSN KGIQD W KK+R TGPPEQK+LLLCGPPGLGKTTLAHVAAKHCGY VVEVNA
Sbjct: 301 LDNENSNVKGIQDLWSKKSRLTGPPEQKILLLCGPPGLGKTTLAHVAAKHCGYRVVEVNA 360
Query: 345 SDDRSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKS 404
SDDRSSSTIE KILDVVQMNS+MADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKS
Sbjct: 361 SDDRSSSTIEAKILDVVQMNSIMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKS 420
Query: 405 NTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSV 464
NT KENVAK DQ KIS KKG K SL RPVICICNDLYAP LR LRQ+AKVH+F+QP+V
Sbjct: 421 NTGKENVAKGDQSGKISAKKGRKTVSLSRPVICICNDLYAPVLRPLRQVAKVHIFVQPTV 480
Query: 465 SRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV 524
SRVV+RLK IC E MK SSIALT LA+Y ECDIRSCLNTLQFL KK+ L++++IGSQV
Sbjct: 481 SRVVNRLKFICKKEGMKVSSIALTALADYAECDIRSCLNTLQFLHNKKQSLHMLEIGSQV 540
Query: 525 VGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGI 584
VG+KDMS++ FDIWKEIFQK+K KR R SS+ ++S+EF+FLHSL+SNRGDYDVIFDGI
Sbjct: 541 VGQKDMSKNVFDIWKEIFQKKKMKRERK--SSTGSLSHEFNFLHSLVSNRGDYDVIFDGI 598
Query: 585 HENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQI 644
HENILQLQYHDP+M KTVKC + LG SDL++QYIMRTQQM LY YQPPLAI VH LV+Q+
Sbjct: 599 HENILQLQYHDPLMQKTVKCFNSLGVSDLINQYIMRTQQMRLYAYQPPLAIIVHHLVAQV 658
Query: 645 QKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPP 704
QKPN+EWPKSYQRYR ME+ DI +SW SKIPP+ISRHLS ESLVEDSISPLLHILSP
Sbjct: 659 QKPNIEWPKSYQRYRTMLMERTDILRSWRSKIPPFISRHLSIESLVEDSISPLLHILSPS 718
Query: 705 TLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPP 764
TLRPVA HLLS KEKN LAQLVS MVSYS+TYKN K +PL + E + D S LSFDPP
Sbjct: 719 TLRPVAFHLLSEKEKNGLAQLVSTMVSYSVTYKNMKPNPLSSTQEFEAALDASALSFDPP 778
Query: 765 INEFITFKGYRSNHYVLALAVKQVLVHE 792
I +FI KGY S HYVL LAVKQVLVHE
Sbjct: 779 ICDFI--KGYNSAHYVLPLAVKQVLVHE 804
>gi|356533326|ref|XP_003535216.1| PREDICTED: chromosome transmission fidelity protein 18 homolog
[Glycine max]
Length = 966
Score = 1126 bits (2913), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 591/982 (60%), Positives = 731/982 (74%), Gaps = 58/982 (5%)
Query: 5 MDMHIPLPEELELLEAN---------------YQDLDPP--------EQDPDPPEPVPPD 41
MDM IPLPEELE LE+N + DLDP +Q P PP+ P
Sbjct: 1 MDMDIPLPEELEFLESNSHFAEQQEEEDRHYYFPDLDPTAEIHESNSQQSPPPPDLAAPS 60
Query: 42 SLPLEINGHKRPRSDTPKSPIDVDEPQFDEKRSRI---VDND------DEDWLRYSPPPP 92
+ P E +GHKR +P +EKR+++ V+ D DEDWLRYSPPP
Sbjct: 61 AEP-ESSGHKRSCPPSPSP-------PEEEKRAKVRVAVEEDSSAAAADEDWLRYSPPPV 112
Query: 93 QARDDARVEV---EEKFVSRYASEIDGDCLPVTAPSGGDRVYVKISSSGVEERVKKLDVR 149
+ A E+ +EK +SRYASEIDG+C+P+TAPSG +RVY K++ EERV KLD
Sbjct: 113 PEGEPAVEEMAFEKEKTLSRYASEIDGECMPITAPSG-NRVYAKLNRFQGEERVTKLDYN 171
Query: 150 AHSNSLTSEPIDVLLQKVEQEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFT 209
+S L+SEP++V+L+++EQEAF KAL +SSEGQS +PE +VHE+LWVDKYAP SFT
Sbjct: 172 GYSTELSSEPVNVILERLEQEAFAKALEASSEGQSVLDVPEAQMVHERLWVDKYAPKSFT 231
Query: 210 ELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKN 269
ELLSDEQTNREVLLWLKQWDS VFGSEIRSTS++VLSAL+RHS+I N+K +S F R +
Sbjct: 232 ELLSDEQTNREVLLWLKQWDSIVFGSEIRSTSDDVLSALKRHSSIVHNQKPLNSKFPRMS 291
Query: 270 RGNRWSNG-NFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLA 328
RG RWSNG ++NS +++ E+ +SK IQD W+ K+R+ GPPE K+LLLCGPPGLGKTTLA
Sbjct: 292 RGPRWSNGRRYKNSRSMD-ESGSSKSIQDIWNAKSRNIGPPEPKILLLCGPPGLGKTTLA 350
Query: 329 HVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALGDGK 388
HVAA+ CGYHVVEVNASDDRS++TIE KILDVVQMNSV++DSRPKCLV+DEIDGALGDGK
Sbjct: 351 HVAARQCGYHVVEVNASDDRSTATIEAKILDVVQMNSVLSDSRPKCLVVDEIDGALGDGK 410
Query: 389 GAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALR 448
GAVEV+LKM+S+ERK + K+++ K Q E+ S KKG K ASL RPVICICNDLYAPALR
Sbjct: 411 GAVEVLLKMISSERKPDAGKQSLGKGQQ-ERKSSKKGSKTASLSRPVICICNDLYAPALR 469
Query: 449 SLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFL 508
LRQ+AKVH+F+QP+VSRVV+RL +ICN E MK S+IALT LAEYTECDIRSCLN+LQFL
Sbjct: 470 PLRQVAKVHIFVQPTVSRVVNRLTYICNKEGMKASAIALTALAEYTECDIRSCLNSLQFL 529
Query: 509 DKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLH 568
KKK+ LNV DIGSQVVG+KDMS++ DIWKEIF KR+TK++ S S EFD L+
Sbjct: 530 FKKKQALNVFDIGSQVVGQKDMSKNVLDIWKEIFHKRRTKKIER--KSHRGKSFEFDSLY 587
Query: 569 SLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYV 628
SL+SNRGD ++I DGIHEN+L+L YHDPVM KTV+C + LG DLMHQYIM TQQ+PLYV
Sbjct: 588 SLVSNRGDSNLILDGIHENVLRLNYHDPVMQKTVECFNNLGVYDLMHQYIMHTQQLPLYV 647
Query: 629 YQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTES 688
Y P +AITVH +VSQ+QKP +EWPKS+QRYR MEKMDI +WH KIPPYI+R+LS S
Sbjct: 648 YLPLVAITVHHIVSQVQKPTIEWPKSHQRYRTMMMEKMDILNTWHHKIPPYIARNLSASS 707
Query: 689 LVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNL 748
VED ISPLLHILSPPT+RPVA LLS KEKNDLAQLVS MVSY++TYK KSD L
Sbjct: 708 FVEDLISPLLHILSPPTIRPVAFQLLSDKEKNDLAQLVSTMVSYTITYKTVKSDMLPQTQ 767
Query: 749 GNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEH 808
EV+ D LS PPI++FI FK Y SNH VL++A+KQVLVHEVEK +I+QV+ K+
Sbjct: 768 RCEVA-DGLALSLVPPISDFINFKDYTSNHNVLSVAMKQVLVHEVEKHKILQVSNDKTGA 826
Query: 809 LADGYKENMDLAGEEDSKTESAKTNNA-AVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDS 867
+G E ++ + A TN+A AV K E ++ S+Q N + + V L+S
Sbjct: 827 FTNGGHEVIETG---TNNIPLANTNHATAVDMKTNENQANV-LSQQLNANPTAVSPNLNS 882
Query: 868 SRSSTAS--VKPKSSGDTKKSFRSSSSFFDRFRKLSGKVSQDNDNAV-QKATVERDSLPL 924
+SS A+ K + G+ KK R+SSSFFDRF+K++ K Q ND ++ ++AT+++D P+
Sbjct: 883 DKSSIAADCGKLLNMGNVKKPSRTSSSFFDRFKKVNVKGLQSNDRSLPEEATLDKDRYPI 942
Query: 925 LFKFNEGFTNAVKRPVRMRDFL 946
LFK+NEGFTNAVKRPVRMR+FL
Sbjct: 943 LFKYNEGFTNAVKRPVRMREFL 964
>gi|356577542|ref|XP_003556883.1| PREDICTED: chromosome transmission fidelity protein 18 homolog
[Glycine max]
Length = 959
Score = 1099 bits (2842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 594/980 (60%), Positives = 725/980 (73%), Gaps = 60/980 (6%)
Query: 5 MDMHIPLPEELELLEAN----------------YQDLDPP--------EQDPDPPEPVPP 40
MDM IPLPEELE LE+N + DLDP +Q P P + P
Sbjct: 1 MDMDIPLPEELEFLESNSHFAEQEQEEEDHHYYFPDLDPAAEFLESNSQQSPSPQDLAVP 60
Query: 41 DSLPLEINGHKRPRSDTPKSPIDVDEPQFDEKRSRI---VDND----DEDWLRYSPPPP- 92
+ P E NGHKR R P SP +EKR+++ V+ D DEDW RYSPPP
Sbjct: 61 SAEP-EFNGHKRSR---PPSP--------EEKRAKVRVAVEEDFAVADEDWPRYSPPPAP 108
Query: 93 --QARDDARVEVEEKFVSRYASEIDGDCLPVTAPSGGDRVYVKISSSGVEERVKKLDVRA 150
QA ++ E +EK +SR+ASEIDG+C+P+TAPSG +RVY K++ EERV KLD
Sbjct: 109 PEQAMEEMMFE-KEKTLSRFASEIDGECMPITAPSG-NRVYAKLNRFQGEERVTKLDYNG 166
Query: 151 HSNSLTSEPIDVLLQKVEQEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTE 210
+S L+SEP++V+L+++EQEAF KAL +SSEG+S +PE VHE+LWVDKYAP SFTE
Sbjct: 167 YSAELSSEPVNVILERLEQEAFAKALEASSEGKSVLDIPEAQTVHERLWVDKYAPKSFTE 226
Query: 211 LLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNR 270
LLSDEQTNREVLLWLKQWDS VFGSEIRSTS++VLS+L+RHS+I N+K +S F R N
Sbjct: 227 LLSDEQTNREVLLWLKQWDSIVFGSEIRSTSDDVLSSLKRHSSIVHNQKPLNSKFPRMNG 286
Query: 271 GNRWSNGN-FRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAH 329
G +WSNG + N+ +++ E+ +SK IQD W+ K+R+ GPPEQK+LLLCG PGLGKTTLAH
Sbjct: 287 GPKWSNGRRYINARSMD-ESGSSKSIQDVWNAKSRNIGPPEQKILLLCGSPGLGKTTLAH 345
Query: 330 VAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALGDGKG 389
VAA+HCGYHVVEVNASDDRS+++IE KILDVVQMNSV++DSRPKCLV+DEIDGALGDGKG
Sbjct: 346 VAARHCGYHVVEVNASDDRSTASIEAKILDVVQMNSVLSDSRPKCLVVDEIDGALGDGKG 405
Query: 390 AVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRS 449
AVEV+LKM+S+ERK + K++ K Q E+ S KKG K ASL RPVICICNDLYAPALR
Sbjct: 406 AVEVLLKMISSERKPDAGKQSFGKGQQ-ERKSSKKGSKAASLSRPVICICNDLYAPALRP 464
Query: 450 LRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLD 509
LRQ+AKVH+F+QP+VSRVV+RL +ICN E MK S+IALT LAEYTECDIRSCLNTLQFL
Sbjct: 465 LRQVAKVHIFVQPTVSRVVNRLTYICNKEGMKASAIALTALAEYTECDIRSCLNTLQFLS 524
Query: 510 KKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHS 569
KK E LNV DIGSQVVG+KD S++ D+WKEIF KR+TK+ S S EFD L+S
Sbjct: 525 KKNEALNVFDIGSQVVGQKDTSKNVLDVWKEIFHKRRTKKTERK--SHRGKSFEFDSLYS 582
Query: 570 LISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVY 629
L+SNRGD ++I DGIHEN+LQL YHDPVM KTVKC D LG DLMHQYIM TQQMPLYVY
Sbjct: 583 LVSNRGDSNLILDGIHENVLQLNYHDPVMQKTVKCFDNLGVYDLMHQYIMHTQQMPLYVY 642
Query: 630 QPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESL 689
P +AITVH +VSQ+QKPN+EWPKS+QRYR MEKMDI +WH KIPPYI+R+LS S
Sbjct: 643 LPLVAITVHHIVSQVQKPNIEWPKSHQRYRTMMMEKMDILNTWHHKIPPYIARNLSASSF 702
Query: 690 VEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLG 749
VED ISPLLHILSPPT+RPVA LLS KE+NDLAQLVS MVSY++TYK KSD L
Sbjct: 703 VEDLISPLLHILSPPTVRPVAFQLLSDKEQNDLAQLVSTMVSYTITYKTLKSDILPQTQR 762
Query: 750 NEVSHDVSTLSFDPPINEFITFKGYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHL 809
EV+ D LS PPI++FI FK Y SNHYVL++A+KQVLVHEVEK +I+QV K+
Sbjct: 763 CEVA-DGLALSLVPPISDFINFKDYTSNHYVLSVAMKQVLVHEVEKHKILQVGNDKAGAF 821
Query: 810 ADGYKENMDLAGEEDSKTESAKTNNAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSR 869
+G E ++ + A T++A I ++++ S Q N + +TV LDS++
Sbjct: 822 TNGGHEVIETG---TNNIPLANTSHATAVDLKINENQANVLSWQLNANPTTVSPNLDSNK 878
Query: 870 SSTAS--VKPKSSGDTKKSFRSSSSFFDRFRKLSGKVSQDNDNAVQ-KATVERDSLPLLF 926
S A+ K + G+ KK RSSSSFFDRF+K++ K Q ND + Q +AT+E+D PLLF
Sbjct: 879 ISRAADCGKLLNMGNMKKPSRSSSSFFDRFKKVNAKGLQSNDRSPQEEATLEKDRYPLLF 938
Query: 927 KFNEGFTNAVKRPVRMRDFL 946
KFNEGFTNAVKRPVR+R+FL
Sbjct: 939 KFNEGFTNAVKRPVRIREFL 958
>gi|334182292|ref|NP_171966.2| chromosome transmission fidelity protein 18 [Arabidopsis thaliana]
gi|332189616|gb|AEE27737.1| chromosome transmission fidelity protein 18 [Arabidopsis thaliana]
Length = 943
Score = 1098 bits (2841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 574/915 (62%), Positives = 678/915 (74%), Gaps = 48/915 (5%)
Query: 46 EINGHKRPRSDTPKSPIDVDE--PQFDEKRSRIVDN----DDEDWLRYSPPPPQARDDAR 99
+I G KRPRS +++DE P D KRS+I DN +DEDWLR+SP
Sbjct: 64 DIKGCKRPRSLISDPIVNLDEVSPASD-KRSKIDDNRVEIEDEDWLRFSPVKEVVHVMEE 122
Query: 100 VEV----EEKFVSRYASEIDGDCLPVTAPSGGDRVYVKISSSGVEERVKKLDVRAHSNSL 155
E +E +SRYASEIDG+C P+TAP GGDRVY K + +E V KLDV+ SN L
Sbjct: 123 EEEVVIPQETMLSRYASEIDGECFPITAPDGGDRVYAKFCRALGDEEVNKLDVKDKSNGL 182
Query: 156 TSEPIDVLLQKVEQEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDE 215
+PI VLLQ+ E+EAFNK L +SSE Q++ E V+HE+LWVDKY+P+SFTELLSDE
Sbjct: 183 IKDPISVLLQQSEKEAFNKVLQASSEDQNETISAETSVMHEKLWVDKYSPSSFTELLSDE 242
Query: 216 QTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWS 275
QTNREVLLWLKQWD+ VFGSEIRST+E VLSAL+RHST S ++K +DS+FTRK + NRWS
Sbjct: 243 QTNREVLLWLKQWDASVFGSEIRSTTEAVLSALKRHSTTSHHQK-SDSAFTRKKQFNRWS 301
Query: 276 NGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHC 335
+F S N E N+N+ I D W+KK++ TGPPEQK+LLLCG PGLGKTTLAH+AAKHC
Sbjct: 302 KESFGYSKNAEVSNTNTADINDLWNKKSKLTGPPEQKILLLCGAPGLGKTTLAHIAAKHC 361
Query: 336 GYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVIL 395
GY VVE+NASD+RS+S IE +ILDVVQMNSV ADSRPKCLVIDEIDGALGDGKGAV+VIL
Sbjct: 362 GYRVVEINASDERSASAIETRILDVVQMNSVTADSRPKCLVIDEIDGALGDGKGAVDVIL 421
Query: 396 KMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAK 455
KMV AERK T KENV + K S KK + A L RPVICICNDLYAPALR LRQIAK
Sbjct: 422 KMVLAERKHATGKENV----ENVKTSSKKDRRTAPLSRPVICICNDLYAPALRPLRQIAK 477
Query: 456 VHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEIL 515
VH+F+QP+VSRVV+RLK+ICN E MK S AL+ LAEYTECDIRSCLNTLQFL KKKE +
Sbjct: 478 VHIFVQPTVSRVVNRLKYICNMEGMKARSFALSALAEYTECDIRSCLNTLQFLYKKKETI 537
Query: 516 NVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRG 575
NV+DIGSQVVGRKDMS+S FDIWKEIF RK KR R++ +S S N FDFLHSL+S+RG
Sbjct: 538 NVIDIGSQVVGRKDMSKSLFDIWKEIFTTRKMKRERSNDASGSGAKN-FDFLHSLVSSRG 596
Query: 576 DYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAI 635
DYD+IFDGIHENILQL YHDPVM KT+ CLD LG SDL+H+YIMRTQQMPLYVY P L I
Sbjct: 597 DYDLIFDGIHENILQLHYHDPVMDKTISCLDGLGTSDLLHRYIMRTQQMPLYVYFPSLVI 656
Query: 636 TVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSIS 695
+HR V+QIQKP +EWPKSY R R +EK + +SWH KIPPYI RHLS +S VEDSIS
Sbjct: 657 PIHRRVAQIQKPMIEWPKSYHRCRTLLVEKQESLRSWHHKIPPYIGRHLSIKSFVEDSIS 716
Query: 696 PLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHD 755
PLLHILSPPTLRPVA HLLS ++K LA LV M SYSLTYKN KSDP+L++L + + D
Sbjct: 717 PLLHILSPPTLRPVASHLLSDRQKEQLAGLVMLMCSYSLTYKNVKSDPVLSSLREDAASD 776
Query: 756 VSTLSFDPPINEFITFKGYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHL--ADGY 813
L+ DP + +FI FKG++ H+VLALA+KQVLVHEVEKQ+I+Q + GKS L +
Sbjct: 777 ALVLALDPHLFDFINFKGHQFKHHVLALAMKQVLVHEVEKQKILQASGGKSGILNKPEIK 836
Query: 814 KENMDLAGEEDSKTESAKTNNAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRS-ST 872
K N DLA KTN AA N S T +T+ S S T
Sbjct: 837 KINQDLA---------KKTNAAA------------------NESQRTPVTSKPPSVSVGT 869
Query: 873 ASVKPKSSGDTKKSFRSSSSFFDRFRKLSGKVSQDNDNAVQKATVERDSLPLLFKFNEGF 932
A+ +S D KK+ R++ +FFDRFRK S K +D ++ +AT +RDS PLLFKFNEGF
Sbjct: 870 ATTSKPNSSDVKKASRNALNFFDRFRK-SRKDYEDPEDVQNRATAKRDSRPLLFKFNEGF 928
Query: 933 TNAVKRPVRMRDFLL 947
TNAVKRPVRMR+FLL
Sbjct: 929 TNAVKRPVRMREFLL 943
>gi|449433189|ref|XP_004134380.1| PREDICTED: chromosome transmission fidelity protein 18 homolog
[Cucumis sativus]
Length = 972
Score = 1058 bits (2737), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 567/983 (57%), Positives = 708/983 (72%), Gaps = 51/983 (5%)
Query: 5 MDMHIPLPEELELLEAN---YQDLDPPE-----------QDPDPPEPV----PPDSLPLE 46
MDM IPLP+ELELLE++ Y+D PE P+ PD
Sbjct: 1 MDMDIPLPDELELLESDLHLYEDYLEPEVYEIEVDEEKRDKESSGSPILQSNSPDFSSAA 60
Query: 47 IN---------GHKRPRSDTPK----SPIDVDEPQFDEKRSRI----VDNDDEDWLRYSP 89
+N G KR RSD S +D EP KRSR V+N+ EDWLRY P
Sbjct: 61 LNSVTESSSENGLKRLRSDDADVLRDSVLDDVEPS-GGKRSRTDKPEVENE-EDWLRYLP 118
Query: 90 PP---PQARDDARVEVEEKFVSRYASEIDGDCLPVTAPSGGDRVYVKISSSGVEERVKKL 146
P A ++ + V+EK V R+ SEIDGD +P+TAP +RVYVK+S SG +E KKL
Sbjct: 119 PTENNSMAEEETNLAVKEKTVFRFVSEIDGDFIPITAPDSDERVYVKLSRSGDKEESKKL 178
Query: 147 DVRAHSNSLTSEPIDVLLQKVEQEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPN 206
D++ + E I+VLL++ E+EA K L +S + Q D P++PV+HE+LWVDKY+P+
Sbjct: 179 DLKERHGGIMQENINVLLERAEKEALTKTLEASYDTQLDAMPPQEPVMHERLWVDKYSPS 238
Query: 207 SFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFT 266
SFTELLSDEQTNREVLLWLKQWDSCVFGSEIR+TS+EVLS+LRRH +++Q+ K + S T
Sbjct: 239 SFTELLSDEQTNREVLLWLKQWDSCVFGSEIRTTSDEVLSSLRRHFSMAQHHKLSSLSST 298
Query: 267 RKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTT 326
RKN+ W GNFR+S + + ++GIQD+W KK+R PPE K+LLLCGPPGLGKTT
Sbjct: 299 RKNKFPGWKAGNFRDSTFSDNKEGTTEGIQDTWSKKSRLPSPPEHKILLLCGPPGLGKTT 358
Query: 327 LAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALGD 386
LAHVAAKHCGYHVVE+NASDDRSSSTIE+KILD +QMNSV+ D+RP CLVIDEIDGALGD
Sbjct: 359 LAHVAAKHCGYHVVEINASDDRSSSTIESKILDAIQMNSVLGDARPNCLVIDEIDGALGD 418
Query: 387 GKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPA 446
GKGAV+VILKMVSA++K+ +EN +K DQP K S KKG + SL+RPVICICNDLYAPA
Sbjct: 419 GKGAVDVILKMVSADKKAE--RENGSK-DQPGKRSSKKGQRSVSLIRPVICICNDLYAPA 475
Query: 447 LRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQ 506
LRSLR +AKVHVF+QP++SR+VSRLK+ICN E M++SS AL+ LA++TECDIRSCLNTLQ
Sbjct: 476 LRSLRLVAKVHVFVQPTISRIVSRLKYICNQEGMRSSSAALSALAQFTECDIRSCLNTLQ 535
Query: 507 FLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDF 566
FL KK+E L+ ++GSQVVG+KD+SRS FDIWKEIF RK K SVS S N ++ +
Sbjct: 536 FLYKKRETLSAEEVGSQVVGQKDISRSVFDIWKEIFHTRKLKLQSRSVSKSRNTCDKLEH 595
Query: 567 LHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPL 626
L+SL+S RGDY++I DGIHENILQL YHDPVM KTVKCL+ L SDLM+QYIM+T QM L
Sbjct: 596 LYSLLSYRGDYELILDGIHENILQLNYHDPVMHKTVKCLEMLEVSDLMNQYIMQTHQMIL 655
Query: 627 YVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLST 686
VYQP IT+HRLV+Q+Q+PN+EWPKSYQR R +EKM+ +SWH ++PP ISRH+++
Sbjct: 656 NVYQPSSIITIHRLVAQVQRPNIEWPKSYQRCRALVLEKMENLRSWHCRVPPLISRHINS 715
Query: 687 ESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLN 746
++ VED +SPLLHI+SP TL+P A+HLLS KEK+D QLV+ MVSY+++YK K+DP N
Sbjct: 716 KTFVEDLVSPLLHIISPRTLKPRAMHLLSEKEKDDFTQLVNVMVSYAISYKQIKTDPHSN 775
Query: 747 NLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGKS 806
+ +E + D S + DPPI+ F+ FK Y S H VLALAVKQ+LVHEVE ++I+Q + GK
Sbjct: 776 SSRHEATLDGSVFALDPPIDGFVCFKDYESCHNVLALAVKQLLVHEVENKKILQGSNGKL 835
Query: 807 EHLADGYKENMDLAGEEDSKTESAKTNNAAVSAK-LIEKSKSLPYSRQCNPSTSTVLTTL 865
E L+D + N + ++ SK KT A+SAK E KS YS Q +PSTST
Sbjct: 836 EPLSDAKQVNHEGTRDKSSKGGLTKTECVALSAKNNTEGQKS--YSTQHHPSTSTSA--- 890
Query: 866 DSSRSSTASVKPKSSGDTKKSFRSSSSFFDRFRKLSGKVSQDNDNAVQKA-TVERDSLPL 924
S +S V KSSG K SSSFFDRFRK K SQ D+ +K T++RD PL
Sbjct: 891 -SDGNSAPGVNLKSSGVRKNPSLGSSSFFDRFRKPGSKGSQTTDSIDKKEITLQRDLRPL 949
Query: 925 LFKFNEGFTNAVKRPVRMRDFLL 947
LFKFNEGFTNA+KRPVR+RDFLL
Sbjct: 950 LFKFNEGFTNAIKRPVRVRDFLL 972
>gi|297848714|ref|XP_002892238.1| AAA-type ATPase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297338080|gb|EFH68497.1| AAA-type ATPase family protein [Arabidopsis lyrata subsp. lyrata]
Length = 939
Score = 974 bits (2519), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 537/933 (57%), Positives = 652/933 (69%), Gaps = 89/933 (9%)
Query: 46 EINGHKRPRSDTPKSPIDVDE--PQFDEKRSRI----VDNDDEDWLRYSPPPPQARDDAR 99
+ING KRPRS +++DE P D KRS+I V+ +DEDWLR+SP
Sbjct: 65 DINGCKRPRSLISDPMVNLDEVSPASD-KRSKIDANRVEIEDEDWLRFSPVKEVVHVMEE 123
Query: 100 VEV---EEKFVS--------RYASEIDGDCLPVTAPSGGDRVYVKISSSGVEERVKKLDV 148
EV +E +S RYASEIDG+C+P+TAP GG+RVY K + +E VKKLDV
Sbjct: 124 EEVVIPQETILSSNLVIGICRYASEIDGECVPITAPDGGERVYAKFCRALGDEEVKKLDV 183
Query: 149 RAHSNSLTSEPIDVLLQKVEQEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSF 208
S+ L +PI VLLQ+ E+EAFNK L +SSE Q++ E V+HE+LWVDKY+P+SF
Sbjct: 184 NDKSHGLIKDPISVLLQQSEKEAFNKVLQASSEDQNETISAEASVMHEKLWVDKYSPSSF 243
Query: 209 TELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRK 268
TELLSDEQTNREVLLWLKQWD+ VFGSEIRST+EEVLSAL+RHST S ++K +DS+FTRK
Sbjct: 244 TELLSDEQTNREVLLWLKQWDASVFGSEIRSTTEEVLSALKRHSTSSHHQK-SDSAFTRK 302
Query: 269 NRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLA 328
+ NRWS +FR N + N+N+ D W+KK++ TGPPEQK+LLLCG PGLGKTTLA
Sbjct: 303 KQFNRWSKESFRYPKNADVSNTNTADNNDLWNKKSKLTGPPEQKILLLCGAPGLGKTTLA 362
Query: 329 HVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALGDGK 388
H+AAKHCGY VVE+NASD+RS+S IE +ILDVVQMNSV ADSRPKCLVIDEIDGALGDGK
Sbjct: 363 HIAAKHCGYRVVEINASDERSASAIETRILDVVQMNSVTADSRPKCLVIDEIDGALGDGK 422
Query: 389 GAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALR 448
GAV+VILKMV AERK T KEN+ + K S KK + A L RPVICICNDLYAPALR
Sbjct: 423 GAVDVILKMVLAERKHATGKENI----ENVKTSSKKERRTAPLSRPVICICNDLYAPALR 478
Query: 449 SLRQIAKVHVFIQPSVSRVVS---------RLKHICNNESMKTSSIALTTLAEYTECDIR 499
LRQI +I + RLK+IC E MK S AL+ LAEYTECDIR
Sbjct: 479 PLRQIGS---YICSTNGESCGKQAEMCANDRLKYICYMEGMKARSFALSALAEYTECDIR 535
Query: 500 SCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSN 559
SCLNTLQFL KKKE +NV+DIGSQVVGRKDMS+S FDIWKEIF RK KR R++ +S S
Sbjct: 536 SCLNTLQFLYKKKETINVIDIGSQVVGRKDMSKSLFDIWKEIFTTRKMKRERSNDASGSG 595
Query: 560 VSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIM 619
N FDFLH+L+S+RGDYD+IFDGIHENILQL YHDPVM KT+ CLDCLG SDL+H+YIM
Sbjct: 596 AKN-FDFLHTLVSSRGDYDLIFDGIHENILQLHYHDPVMDKTISCLDCLGTSDLLHRYIM 654
Query: 620 RTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPY 679
RTQQMPLYV LV N++ R R +EK + +SWH KIPPY
Sbjct: 655 RTQQMPLYV-----------LV------NIKC----TRCRTLLVEKQESLRSWHHKIPPY 693
Query: 680 ISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNT 739
I RHLS +S VEDSISPLLHILSPPTLRPVA HLLS ++K+ LA LV M SYSLTYKN
Sbjct: 694 IGRHLSIKSFVEDSISPLLHILSPPTLRPVASHLLSDRQKDQLAGLVMLMCSYSLTYKNV 753
Query: 740 KSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLALAVKQVLVHEVEKQ--- 796
KSDP+L+NL ++ + D L+ DP + +FI FKG++ H+VLALA+KQVLVHE+
Sbjct: 754 KSDPVLSNLRDDAASDALVLALDPHLFDFINFKGHQFKHHVLALAMKQVLVHELHGDLDC 813
Query: 797 RIMQVTIGKSEHL--ADGYKENMDLAGEEDSKTESAKTNNAAVSAKLIEKSKSLPYSRQC 854
I+Q + G+S L + K N DLA + ++ ++ N +S+K
Sbjct: 814 MILQASGGRSGILNKPEIKKINQDLARKRNAAANESQRN--PISSK-------------- 857
Query: 855 NPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDRFRKLSGKVSQDNDNAVQK 914
P S + T + KP SS D KK+ R++ +FFDRFRK S K +D ++ ++
Sbjct: 858 PPLVSVGIAT---------TSKPNSS-DVKKASRTALNFFDRFRK-SRKDYEDPEDVQKR 906
Query: 915 ATVERDSLPLLFKFNEGFTNAVKRPVRMRDFLL 947
AT +RDS PLLFKFNEGFTNAVKRPVRMR+FLL
Sbjct: 907 ATAKRDSRPLLFKFNEGFTNAVKRPVRMREFLL 939
>gi|414865978|tpg|DAA44535.1| TPA: hypothetical protein ZEAMMB73_048051 [Zea mays]
Length = 944
Score = 959 bits (2479), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/980 (52%), Positives = 665/980 (67%), Gaps = 70/980 (7%)
Query: 3 MDMDMHIPLPEELELLEANYQDLDPPEQD-----PDPPEPVPPDSLPLEINGHKRPRSDT 57
MDMDM +P P+ELE +E++ L P E+D PD + P N + S
Sbjct: 1 MDMDMEMPDPDELEWMESH--GLVPEEEDAYFDDPDEGFVLAPGDSDQPCNSPQPQESAA 58
Query: 58 PKSPIDVDEPQFDEKRS-----------------RIVDNDDEDWLRYSPPPPQARDDARV 100
P++ +E KR R V+ +DEDWLRYSPPP +
Sbjct: 59 PRA----NEAPGGLKRPPPPPPPEQDEEEERSKRRNVEQEDEDWLRYSPPPA-----PEI 109
Query: 101 EVEEKFVSRYASEIDGDCLPVTAPSGGDRVYVKISS--------SGVEERVKKLDVRAHS 152
V EK +SR+ASEI GD +PVTAP+G +RVY K++ SG + V+ + ++
Sbjct: 110 VVAEKTISRFASEIHGDSVPVTAPNG-ERVYAKLAMEGLVGRGISGTRQGVQFSNPNSNH 168
Query: 153 NSLTSEPIDVLLQKVEQEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELL 212
L SE D L ++ EQEA KAL S++ + P+V E+LWV+KYAPNSFTELL
Sbjct: 169 KGLLSESFDSLTRRAEQEALAKALQESTDSIDRVACSATPLVTEKLWVEKYAPNSFTELL 228
Query: 213 SDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGN 272
SDE TNREVLLWLKQWDS VFGS IR+T ++VLSALRRHS+ Q N + F++ G
Sbjct: 229 SDEHTNREVLLWLKQWDSIVFGSHIRATGDDVLSALRRHSSTIQKNASNRNFFSKSKGGP 288
Query: 273 RWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAA 332
S ++ L ++SN +G+ S+ KK+ PEQKVLLLCGPPGLGKTTLAHVA
Sbjct: 289 VAS----QDGTPLNAQSSNPEGLGGSFSKKSSVDNAPEQKVLLLCGPPGLGKTTLAHVAV 344
Query: 333 KHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVE 392
+HCGYHVVE+NASDDRS+S+IE KILDVVQMNS+M+DS+PKCLVIDEIDGALGDGKGAVE
Sbjct: 345 RHCGYHVVEINASDDRSASSIETKILDVVQMNSIMSDSKPKCLVIDEIDGALGDGKGAVE 404
Query: 393 VILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQ 452
VILKM++AE+ +N+ K +E Q K S+K + A LLRPVICICND+YAPALR LRQ
Sbjct: 405 VILKMINAEKSNNSDKSTNGEETQARKTSRKSH-RTAKLLRPVICICNDIYAPALRQLRQ 463
Query: 453 IAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKK 512
+AKVHVF+QP++SRVV+RLK+IC NE K SSIAL+ LAEYTECDIRSCLNTLQFL+KK+
Sbjct: 464 VAKVHVFVQPTISRVVNRLKYICKNEGFKASSIALSALAEYTECDIRSCLNTLQFLNKKR 523
Query: 513 EILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLIS 572
LN+ I SQV+G+KD S+S D+WK++ QK++ KR S N + DFL +LIS
Sbjct: 524 VALNITAIDSQVIGQKDKSKSILDVWKQVLQKKRLKRA-GKAESLFNEDKDIDFLFTLIS 582
Query: 573 NRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPP 632
NRGDY+V DGIHEN L+L YHDP++ KTVKCLD LG SD + QY+ RTQQMPL+ YQPP
Sbjct: 583 NRGDYEVTMDGIHENFLRLSYHDPMLQKTVKCLDILGVSDSLTQYVYRTQQMPLHAYQPP 642
Query: 633 LAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVED 692
+AIT+ R+V+Q++KPN+ WPK+ QR R +EK D+ K+W +++ P++SRHLS ES VED
Sbjct: 643 IAITISRMVAQVEKPNINWPKALQRSRALLLEKKDMLKTWQNQMSPFVSRHLSVESFVED 702
Query: 693 SISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEV 752
+ SPLLHILSP +LRPVAL+LLS +EK++L QLV MVSYS+TY+NTK P + V
Sbjct: 703 TASPLLHILSPLSLRPVALNLLSEREKDELVQLVDTMVSYSVTYRNTKFVPQEKANLSVV 762
Query: 753 SHDVSTLSFDPPINEFITFKGYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADG 812
H+VS+LS PPIN+ I F+GY+S H L+LA+KQVLVHEVEKQ+I++ + GK
Sbjct: 763 PHEVSSLSLYPPINDVINFEGYQSEHIGLSLAMKQVLVHEVEKQKIIKDSAGKL------ 816
Query: 813 YKENMDLAGEEDSKTESAKTNNAAVSAKLIEKS-KSLPYSRQCNPSTSTVLTTLDSSRSS 871
++ + + + K+E+ T A I + S S +CN S TL+ +S
Sbjct: 817 ----LNQSNDGNMKSEALSTIRKKTVANSIRPALHSSKDSSKCNSS------TLEMQSNS 866
Query: 872 TASVKPKSSGDTKKSFRSSSSFFDRFRK---LSGKVSQDNDNAVQKATVERDSLPLLFKF 928
+ V S KK +++FFDRFRK + K +D +Q+AT++RDS PL+FK+
Sbjct: 867 ASIVNDNDSISAKKHSSRAANFFDRFRKERPVDAKTH--SDVGLQRATLQRDSRPLIFKY 924
Query: 929 NEGFTNAVKRPVRMRDFLLS 948
NEGFTNAVKRPVR+RD LLS
Sbjct: 925 NEGFTNAVKRPVRVRDLLLS 944
>gi|357120148|ref|XP_003561791.1| PREDICTED: chromosome transmission fidelity protein 18 homolog
[Brachypodium distachyon]
Length = 944
Score = 926 bits (2393), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/987 (52%), Positives = 661/987 (66%), Gaps = 83/987 (8%)
Query: 1 MDMDMDMHIPLPEELELLEANYQDLDPPEQDP----DPPEPVPPDSLPLEINGHKRPR-- 54
M+M+ DM +P PEELE +E++ L P E++ DP E P + + +PR
Sbjct: 1 MEME-DMEMPDPEELEWMESH--GLLPEEEEDTYFDDPDEGFLPAA-----DDASKPRDP 52
Query: 55 ----SDTPKSPID-VDEPQFDEKRSRIV----------------DNDDEDWLRYSPPPPQ 93
+ +P P + V EP D+ DEDWLRYSPP
Sbjct: 53 PQEAAVSPAKPAEEVSEPNLKRPSPPPPVEQEEERRKRRNVDREDSVDEDWLRYSPP--- 109
Query: 94 ARDDARVE-VEEKFVSRYASEIDGDCLPVTAPSGGDRVYVKISSSGVEERVKKLDVR--- 149
VE V EK VSR+ASEI GDC+PVTAP+G +RVY K+ + + V + R
Sbjct: 110 ----TAVEIVAEKIVSRFASEIQGDCMPVTAPNG-ERVYAKLVTEKLVSEVIEGSRRRTP 164
Query: 150 ---AHSNSLTSEPIDVLLQKVEQEAFNKALNSSSEGQSD---RSLPEKPVVHEQLWVDKY 203
+ L SE L + EQEA KAL S+E Q P PVV EQLWV+KY
Sbjct: 165 ISNPNHKGLLSESFHSLTMRAEQEALAKALLESTEKQDIGDVEGCPVTPVVTEQLWVEKY 224
Query: 204 APNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDS 263
AP+SFTELLSDE TNREVLLWLKQWDSCVFGS IR+TS++ LSALRRHS Q K ++
Sbjct: 225 APHSFTELLSDEHTNREVLLWLKQWDSCVFGSHIRATSDDTLSALRRHSCAIQ-KNSSNR 283
Query: 264 SFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLG 323
SF K+R ++ G ++S SNS+ + +++K++ PEQKVLLLCGP GLG
Sbjct: 284 SFLSKSRAG-YAMG--QDSMPQNAPGSNSENPRSTFNKRSSVDNAPEQKVLLLCGPAGLG 340
Query: 324 KTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGA 383
KTTLAHVAAKHCGYHVVE+NASDDRS+S+IE KILDVVQMNS+M+DS+PKCLVIDEIDGA
Sbjct: 341 KTTLAHVAAKHCGYHVVEINASDDRSASSIEPKILDVVQMNSIMSDSKPKCLVIDEIDGA 400
Query: 384 LGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLY 443
LGDGKGAVEVILKM++AE+ +N+ + +E Q +K S +KG + A LLRPVICICNDLY
Sbjct: 401 LGDGKGAVEVILKMINAEKNNNSDRSTGGEETQVQKSSSRKGHRIAKLLRPVICICNDLY 460
Query: 444 APALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLN 503
APALR LRQ+AKVH+F+QP++SRVV+RLK+IC E KTSSIAL+ LA+YTECDIRSCLN
Sbjct: 461 APALRKLRQVAKVHIFVQPTISRVVNRLKYICKKEGFKTSSIALSALADYTECDIRSCLN 520
Query: 504 TLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNE 563
TLQFL+KK+E LN+ SQV+GRKDMS+S D+WK++ QK+K KR + + S+VS++
Sbjct: 521 TLQFLNKKREALNISGFESQVIGRKDMSKSILDVWKQVLQKKKLKR---AEMADSHVSSD 577
Query: 564 FDF--LHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRT 621
D L SLISNRGDYDV DGIHEN L+L YHDP++ KTVKCLD LG SD M QY+ RT
Sbjct: 578 KDIGSLFSLISNRGDYDVTMDGIHENFLRLSYHDPMLHKTVKCLDVLGVSDSMMQYVFRT 637
Query: 622 QQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYIS 681
Q M L VYQPP+AIT+ R+V+Q++KPN+EWPK+ QR R +EK D K+W +++ P IS
Sbjct: 638 QHMSLQVYQPPIAITISRMVAQVEKPNIEWPKALQRCRTMLLEKKDSLKTWQNRMSPLIS 697
Query: 682 RHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKS 741
RHLS ES V+D SP LHILSP +LRPVAL+LLS +EK+DL QLV MVSYS+TYKNTK
Sbjct: 698 RHLSVESFVKDIASPFLHILSPLSLRPVALNLLSEREKDDLLQLVDTMVSYSVTYKNTKF 757
Query: 742 DPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLALAVKQVLVHEVEKQRIMQV 801
+P G+ VS DV LS DPP+N+ I+FK Y+S H L+LA+KQVLVHEVEKQ+I++
Sbjct: 758 EPQERTHGSIVSADVPLLSLDPPLNDIISFKEYQSEHIGLSLAMKQVLVHEVEKQKIIKD 817
Query: 802 TIGKSEHLADGYKENMDLAGEEDSKTESAKTNNAAVSAKLIEKSKSLPYSRQCNPSTSTV 861
+ GK + +G + + S +A TN +A+ + S +
Sbjct: 818 SAGKLLNQTNGVRSEIPTTS---SHKAAASTNVSALDS-----------------SKTRN 857
Query: 862 LTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDRFRKLSGKVSQ-DNDNAVQKATVERD 920
L TL +S +S+ K KK + FF FRK ++ ND A Q+AT +RD
Sbjct: 858 LATLPMQLNSGSSLSVKDPTPAKKHSSRPTDFFHSFRKERPVGAKPRNDAAQQRATTQRD 917
Query: 921 SLPLLFKFNEGFTNAVKRPVRMRDFLL 947
PL+FK+NEGFTNAVKRPVR+RD LL
Sbjct: 918 LRPLIFKYNEGFTNAVKRPVRVRDLLL 944
>gi|326491233|dbj|BAK05716.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 939
Score = 924 bits (2388), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/979 (52%), Positives = 649/979 (66%), Gaps = 74/979 (7%)
Query: 3 MDMDMHIPLPEELELLEANYQDLDPPEQD----PDPPEPVPPDSLPLEINGHKRP----- 53
M DM +P PEELE +E+N L P E++ DP E LP + K P
Sbjct: 1 MAADMEMPDPEELEWMESN--GLLPEEEEYAYFDDPDEGF----LPAATDACKPPAPPQE 54
Query: 54 RSDTPKSPID-VDEPQFDE--------------KRSRI--VDNDDEDWLRYSPPPPQARD 96
+ +P P D V E KR + VD+ DEDWLRYSPPP
Sbjct: 55 TTTSPAKPADEVTEANLKRPPPPPPPEQEEERSKRRNVDPVDSVDEDWLRYSPPP----- 109
Query: 97 DARVEVEEKFVSRYASEIDGDCLPVTAPSGGDRVYVKISS----SGVEERVKKLDVRAHS 152
A V EK VSR+ASEI GD +PVTAP+G +RVY K+++ S V E ++ ++
Sbjct: 110 -AAEVVAEKIVSRFASEIQGDSMPVTAPNG-ERVYAKLTTEKLFSEVIEGTRRRTSFSNH 167
Query: 153 NSLTSEPIDVLLQKVEQEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELL 212
+ L SE +L + EQEA KAL S+E Q+ P P+V EQLWV+KYAP+SFTELL
Sbjct: 168 DGLLSESFHLLTMQAEQEAIAKALLESTETQNVEGFPLTPIVTEQLWVEKYAPHSFTELL 227
Query: 213 SDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGN 272
SDE TNREVLLWLKQWDSCVFGS IR TS++ LSALRRHS Q + S F++ G
Sbjct: 228 SDEHTNREVLLWLKQWDSCVFGSHIRGTSDDTLSALRRHSCTIQKNSSSRSFFSKIKGG- 286
Query: 273 RWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAA 332
+ G ++S SNS+ ++ ++HKK PEQKVLLLCGP GLGKTTLAHVAA
Sbjct: 287 -YVMG--QDSMPQNASGSNSEDLKSTFHKKPSVDNAPEQKVLLLCGPAGLGKTTLAHVAA 343
Query: 333 KHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVE 392
KHCGYHVVE+NASDDRS+S+IE KILDVVQMNS+M+DS+PKCLVIDEIDGALGDGKGAVE
Sbjct: 344 KHCGYHVVEINASDDRSASSIEPKILDVVQMNSIMSDSKPKCLVIDEIDGALGDGKGAVE 403
Query: 393 VILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQ 452
VILKM++A++ +N + A+E Q +K S +K K A LLRPVICICNDLYAPALR LRQ
Sbjct: 404 VILKMINADKNNNLDRSTGAEETQVQKASSRKSHKTAKLLRPVICICNDLYAPALRKLRQ 463
Query: 453 IAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKK 512
+AKVH+F+QP++SRVV+RLK+IC E KTSSIAL+ LA+YTECDIRSCLNTLQFL+KK+
Sbjct: 464 VAKVHIFVQPTISRVVNRLKYICKKEGFKTSSIALSALADYTECDIRSCLNTLQFLNKKR 523
Query: 513 EILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDF--LHSL 570
E LN+ SQVVGRKDMS+S FD+WK++ QK+K KR + SNV+ + D L SL
Sbjct: 524 EALNISGFDSQVVGRKDMSKSIFDVWKQVLQKKKLKRAE---MADSNVNGDKDIGSLFSL 580
Query: 571 ISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQ 630
ISNRGDYDV DGIHEN L+L YHDP++ KTVKCLD LG SD + QY+ RTQ M L YQ
Sbjct: 581 ISNRGDYDVTMDGIHENFLKLSYHDPMLHKTVKCLDVLGVSDYLMQYVFRTQHMSLQAYQ 640
Query: 631 PPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLV 690
PP+AIT+ R+++Q++KPN+EWPK+ QR R +EK D K+W +++ P ISRHLS ES V
Sbjct: 641 PPIAITISRIIAQVEKPNIEWPKALQRCRAMLLEKKDTLKTWQNRMSPLISRHLSVESFV 700
Query: 691 EDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGN 750
D S LHILSP +LRPVA++L+S +EKN+ QLV MV+YS+TYK+TK +P G
Sbjct: 701 GDIASAFLHILSPLSLRPVAINLMSEREKNEFVQLVDTMVAYSVTYKSTKFEPQERANGF 760
Query: 751 EVSHDVSTLSFDPPINEFITFKGYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGK-SEHL 809
V D+ +LSFDPPIN+ I FK Y+S H L+LA+KQVLVHEVEKQ+I++ + GK +
Sbjct: 761 IVPMDIPSLSFDPPINDIIRFKDYQSEHIGLSLAMKQVLVHEVEKQKIIKDSAGKLLNQI 820
Query: 810 ADGYKENMDLAGEEDSKTESAKTNNAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSR 869
+G + + + + + T + + S N ++T L+S+
Sbjct: 821 NEGVRSEVPITTYQKTATGTVCDTSHGSS----------------NGKSATPPVQLNSA- 863
Query: 870 SSTASVKPKSSGDTKKSFRSSSSFFDRFRK-LSGKVSQDNDNAVQKATVERDSLPLLFKF 928
+S+ K K+ + FF FRK G D Q TV+RD PL+FK+
Sbjct: 864 ---SSLSGKGLAPAKRPSSRPTDFFQSFRKERPGGAKAHVDAGQQGTTVQRDLRPLIFKY 920
Query: 929 NEGFTNAVKRPVRMRDFLL 947
NEG+TNAVKRPVR+RD LL
Sbjct: 921 NEGYTNAVKRPVRVRDLLL 939
>gi|296088871|emb|CBI38383.3| unnamed protein product [Vitis vinifera]
Length = 880
Score = 923 bits (2385), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/594 (74%), Positives = 508/594 (85%)
Query: 179 SSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIR 238
+SE Q+D LPE VV+EQLWVDKY+P+SFTELLSDEQTNREVLLWLKQWDSCVFGSEIR
Sbjct: 286 NSELQNDAILPETQVVNEQLWVDKYSPSSFTELLSDEQTNREVLLWLKQWDSCVFGSEIR 345
Query: 239 STSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDS 298
ST+EEVLSALRRHS+I+Q+++ + S RKN+G R S+GN R SNNL+ EN N KG+Q+
Sbjct: 346 STTEEVLSALRRHSSIAQHQRPSGMSLHRKNKGQRLSDGNSRYSNNLDQENGNLKGLQEL 405
Query: 299 WHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKIL 358
W+KK+R TGPPEQK+LLLCGPPGLGKTTLAHVAAKHCGY VVE+NASDDRSSSTIE KIL
Sbjct: 406 WNKKSRGTGPPEQKILLLCGPPGLGKTTLAHVAAKHCGYRVVEINASDDRSSSTIEAKIL 465
Query: 359 DVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPE 418
DVVQMNSVMADS+P CLVIDEIDGAL DGKGAVEVILKMVS ERK++ K NVAK D+
Sbjct: 466 DVVQMNSVMADSKPNCLVIDEIDGALSDGKGAVEVILKMVSTERKADNRKGNVAKVDESG 525
Query: 419 KISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNE 478
+IS KKG K ASL RPVICICNDLYAPALR LRQ+AKVH+F+QP+VSRVVSRLK+ICN E
Sbjct: 526 QISSKKGHKTASLSRPVICICNDLYAPALRPLRQVAKVHIFVQPTVSRVVSRLKYICNME 585
Query: 479 SMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIW 538
+KT+S AL LAEYTECDIRSCLNTLQFL+KK + LNV +I SQVVG+KDMSRS FDIW
Sbjct: 586 GLKTNSTALAALAEYTECDIRSCLNTLQFLNKKNQTLNVFEISSQVVGQKDMSRSIFDIW 645
Query: 539 KEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVM 598
KEIFQ RK KR + S + S +SN FDFL+ LISNRGDYD+I DGIHENI QL YHDP+M
Sbjct: 646 KEIFQDRKMKRAKRSDNCCSGMSNGFDFLYPLISNRGDYDLILDGIHENIFQLHYHDPIM 705
Query: 599 LKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRY 658
KTVKCL+ LG SDL+HQY+MRTQQM L VYQP AI++HRL++Q+QKP +EWPKS+ RY
Sbjct: 706 QKTVKCLNTLGISDLVHQYVMRTQQMSLNVYQPLTAISLHRLIAQVQKPIIEWPKSFMRY 765
Query: 659 RNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKE 718
R FMEK DI +SWH+KI PYISRHLS +S VEDS+SPLLHILSPPTLRPVALHLLS +E
Sbjct: 766 RTTFMEKRDILRSWHNKIAPYISRHLSIKSFVEDSVSPLLHILSPPTLRPVALHLLSERE 825
Query: 719 KNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFK 772
+NDLAQL++AMVS+S+TYKN KSDPL +E + D +LSFDPPI +F+TFK
Sbjct: 826 RNDLAQLINAMVSFSITYKNMKSDPLPGTQLHEAASDGLSLSFDPPIADFVTFK 879
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/187 (46%), Positives = 111/187 (59%), Gaps = 19/187 (10%)
Query: 3 MDMDMHIPLPEELELLEAN---YQDLDPPEQDPDPPEPVPPDSLPL----------EING 49
MD +M+IPLPEELE LEAN +QDL+ E P + L ++NG
Sbjct: 1 MDANMYIPLPEELEWLEANSHLHQDLEDYEDQEPPEPYPEEEEEQLPEPPSPLSQPQVNG 60
Query: 50 HKRPRSDTPKSPIDVDEPQFDEKRSRIVDNDDEDWLRYSPPPPQARD-DARVEVEEKFVS 108
KRP SD P +P + D + +EDWLRYS P D + V EE+ VS
Sbjct: 61 QKRPLSDGPDAPDSGKRSKADLSET----GAEEDWLRYSLPQDSDGDLEPMVVDEERIVS 116
Query: 109 RYASEIDGDCLPVTAPSGGDRVYVKISSSGVEERVKKLDVRAHSNSLTSEPIDVLLQKVE 168
RYASEIDGDC+PVT P GGDRVY+KIS++G + R+KKLD+ + L EPI VL+Q+VE
Sbjct: 117 RYASEIDGDCIPVTGP-GGDRVYLKISATGSDGRLKKLDLEGRTKGLILEPISVLMQRVE 175
Query: 169 QEAFNKA 175
Q+AF K
Sbjct: 176 QDAFTKV 182
>gi|449518591|ref|XP_004166320.1| PREDICTED: chromosome transmission fidelity protein 18 homolog,
partial [Cucumis sativus]
Length = 757
Score = 907 bits (2345), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/744 (61%), Positives = 574/744 (77%), Gaps = 10/744 (1%)
Query: 155 LTSEPIDVLLQKVEQEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSD 214
+ E I+VLL++ E+EA K L +S + Q D P++PV+HE+LWVDKY+P+SFTELLSD
Sbjct: 1 IMQENINVLLERAEKEALTKTLEASYDTQLDAMPPQEPVMHERLWVDKYSPSSFTELLSD 60
Query: 215 EQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRW 274
EQTNREVLLWLKQWDSCVFGSEIR+TS+EVLS+LRRH +++Q+ K + S TRKN+ W
Sbjct: 61 EQTNREVLLWLKQWDSCVFGSEIRTTSDEVLSSLRRHFSMAQHHKLSSLSSTRKNKFPGW 120
Query: 275 SNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKH 334
GNFR+S + + ++GIQD+W KK+R PPE K+LLLCGPPGLGKTTLAHVAAKH
Sbjct: 121 KAGNFRDSTFSDNKEGTTEGIQDTWSKKSRLPSPPEHKILLLCGPPGLGKTTLAHVAAKH 180
Query: 335 CGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVI 394
CGYHVVE+NASDDRSSSTIE+KILD +QMNSV+ D+RP CLVIDEIDGALGDGKGAV+VI
Sbjct: 181 CGYHVVEINASDDRSSSTIESKILDAIQMNSVLGDARPNCLVIDEIDGALGDGKGAVDVI 240
Query: 395 LKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIA 454
LKMVSA++K+ +EN +K DQP K S KKG + SL+RPVICICNDLYAPALRSLR +A
Sbjct: 241 LKMVSADKKAE--RENGSK-DQPGKRSSKKGQRSVSLIRPVICICNDLYAPALRSLRLVA 297
Query: 455 KVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEI 514
KVHVF+QP++SR+VSRLK+ICN E M++SS AL+ LA++TECDIRSCLNTLQFL KK+E
Sbjct: 298 KVHVFVQPTISRIVSRLKYICNQEGMRSSSAALSALAQFTECDIRSCLNTLQFLYKKRET 357
Query: 515 LNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNR 574
L+ ++GSQVVG+KD+SRS FDIWKEIF RK K SVS S N ++ + L+SL+S R
Sbjct: 358 LSAEEVGSQVVGQKDISRSVFDIWKEIFHTRKLKLQSRSVSKSRNTCDKLEHLYSLLSYR 417
Query: 575 GDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLA 634
GDY++I DGIHENILQL YHDPVM KTVKCL+ L SDLM+QYIM+T QM L VYQP
Sbjct: 418 GDYELILDGIHENILQLNYHDPVMHKTVKCLEMLEVSDLMNQYIMQTHQMILNVYQPSSI 477
Query: 635 ITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSI 694
IT+HRLV+Q+Q+PN+EWPKSYQR R +EKM+ +SWH ++PP ISRH+++++ VED +
Sbjct: 478 ITIHRLVAQVQRPNIEWPKSYQRCRALVLEKMENLRSWHCRVPPLISRHINSKTFVEDLV 537
Query: 695 SPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSH 754
SPLLHI+SP TL+P A+HLLS KEK+D QLV+ MVSY+++YK K+DP N+ +E +
Sbjct: 538 SPLLHIISPRTLKPRAMHLLSEKEKDDFTQLVNVMVSYAISYKQIKTDPHSNSSRHEATL 597
Query: 755 DVSTLSFDPPINEFITFKGYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYK 814
D S + DPPI+ F+ FK Y S H VLALAVKQ+LVHEVE ++I+Q + GK E L+D +
Sbjct: 598 DGSVFALDPPIDGFVCFKDYESCHNVLALAVKQLLVHEVENKKILQGSNGKLEPLSDAKQ 657
Query: 815 ENMDLAGEEDSKTESAKTNNAAVSAK-LIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTA 873
N + ++ SK KT A+SAK E KS YS Q +PSTST S +S
Sbjct: 658 VNHEGTRDKSSKGGLTKTECVALSAKNNTEGQKS--YSTQHHPSTSTSA----SDGNSAP 711
Query: 874 SVKPKSSGDTKKSFRSSSSFFDRF 897
V KSSG K SSSFFDR+
Sbjct: 712 GVNLKSSGVRKNPSLGSSSFFDRY 735
>gi|297600702|ref|NP_001049644.2| Os03g0264800 [Oryza sativa Japonica Group]
gi|255674393|dbj|BAF11558.2| Os03g0264800 [Oryza sativa Japonica Group]
Length = 958
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/1028 (49%), Positives = 638/1028 (62%), Gaps = 153/1028 (14%)
Query: 3 MDMDMHIPLPEELELLEAN---------YQDLDPPEQDPDPPEPVPPDSLPLEINGHKRP 53
M+ DM +P PEELE +E++ Y D PE + P D + P
Sbjct: 1 MEADMDMPDPEELEWMESHGLLPEEEEEYAYFDDPEDEGFLPAAAGAD------QPRRSP 54
Query: 54 RSDT--PKSPID-VDEPQF-----------DEKRS--RIVDNDD-----EDWLRYSPPPP 92
+ T P P D V E E+RS R VD +D EDWLRYSPPP
Sbjct: 55 QETTAAPSKPADEVSEGNLKRPPPPPPPEQGEERSKRRNVDREDSGDGDEDWLRYSPPPV 114
Query: 93 QARDDARVEV-EEKFVSRYASEIDGDCLPVTAPSGGDRVYVKISSSG--------VEERV 143
VEV EK +SR+AS+I GDC+ VTAP+G +RVY K+++ G +R
Sbjct: 115 -------VEVVAEKTISRFASDIRGDCMSVTAPNG-ERVYAKVATDGLDGGGIGGTRQRT 166
Query: 144 KKLDVRAHSNSLTSEPIDVLLQKVEQEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKY 203
+ + L SE L + EQEA KAL S+E Q+ S P P+V EQLWV+KY
Sbjct: 167 RISKPNFNYKGLLSESFHSLTSRAEQEALAKALQESAETQNLESCPVTPLVTEQLWVEKY 226
Query: 204 APNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDS 263
+PNSFTELLSDE TNREVLLWLKQWDSCVFGS +R+T ++VLSALRRHS+ Q N +
Sbjct: 227 SPNSFTELLSDEHTNREVLLWLKQWDSCVFGSHVRATGDDVLSALRRHSSAIQKNSSNRN 286
Query: 264 SFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLG 323
F++ G S N + + SNS+ + S++K+ + PEQKVLLLCGPPGLG
Sbjct: 287 FFSKSKGGPGMSQDNMLQNAH----GSNSEDLTSSFNKRPTTDNAPEQKVLLLCGPPGLG 342
Query: 324 KTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGA 383
KTTLAHVAAKHCGYHVVE+NASDDRS+S+IE KILDV+QMNS+M+DS+PKCLVIDEIDGA
Sbjct: 343 KTTLAHVAAKHCGYHVVEINASDDRSASSIEPKILDVIQMNSIMSDSKPKCLVIDEIDGA 402
Query: 384 LGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLY 443
LGDGKGAVE ++AE+ +++ A++ Q K S KKG K L+RPVICICNDLY
Sbjct: 403 LGDGKGAVE-----INAEKNNSSNSSTSAEDTQVRK-SSKKGHKIPKLMRPVICICNDLY 456
Query: 444 APALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYT--------- 494
APALR LRQ+AKVH+F+QP++SRVV+RLK+IC E KTS IAL+ LAEYT
Sbjct: 457 APALRQLRQVAKVHMFVQPTISRVVNRLKYICKKERFKTSPIALSALAEYTGMVSFAPFT 516
Query: 495 --------------------------------ECDIRSCLNTLQFLDKKKEILNVMDIGS 522
ECDIRSCLNTLQFL+KK+E LN+ S
Sbjct: 517 IVRSSAYTVVTSNLSNCKQENQRRLIEQSLPAECDIRSCLNTLQFLNKKREALNISGFDS 576
Query: 523 QVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFD 582
QV+GRKDMS+S D+WK++ QK+K KR+ V S+ + + D L SLISNRGDYDV D
Sbjct: 577 QVIGRKDMSKSIIDVWKQVLQKKKLKRIEK-VDSNFSRGKDIDSLFSLISNRGDYDVTMD 635
Query: 583 GIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVS 642
GIHEN L+L YHDP++ KTVKCLD LG SD + QY+ RTQQM L+VYQPP+AIT+ +LV+
Sbjct: 636 GIHENFLKLNYHDPMLQKTVKCLDILGVSDSLMQYVYRTQQMSLHVYQPPVAITISQLVA 695
Query: 643 QIQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILS 702
Q++KPN+EWPKS QR R +EK D K+W +++ P ISRHLS ES VED SP LHI+S
Sbjct: 696 QVEKPNIEWPKSLQRCRTMLLEKKDKLKTWQNQMSPLISRHLSVESFVEDIASPFLHIIS 755
Query: 703 PPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFD 762
P +LRPVAL+LLS +EK++L QLV MVSYS+TY+NTK +P G+ VS DV +LS D
Sbjct: 756 PSSLRPVALNLLSEREKDELVQLVDTMVSYSITYRNTKLEPQERISGSMVSPDVPSLSLD 815
Query: 763 PPINEFITFKGYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGE 822
P IN+ I FK VEKQ+IM+ + GK + A+ G+
Sbjct: 816 PAINDIINFK--------------------VEKQKIMKDSAGKLLNQAN--------EGD 847
Query: 823 EDSKTESAKTNNAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGD 882
+ ++ ++ +A VS K KS NP TTL SS +S+ K
Sbjct: 848 KRNEVSVSEKKSALVSTKSTSKS---------NP------TTLKMQLSSASSMSGKDPAP 892
Query: 883 TKKSFRSSSSFFDRFRK---LSGKVSQDNDNAVQKATVERDSLPLLFKFNEGFTNAVKRP 939
KK +FFDRFRK + K ND Q AT RDS PL+FK+NEGFTNAVKRP
Sbjct: 893 AKKHSNHGINFFDRFRKERPVDAKAR--NDAGQQVATTLRDSRPLIFKYNEGFTNAVKRP 950
Query: 940 VRMRDFLL 947
V++RD LL
Sbjct: 951 VKVRDLLL 958
>gi|242036221|ref|XP_002465505.1| hypothetical protein SORBIDRAFT_01g040155 [Sorghum bicolor]
gi|241919359|gb|EER92503.1| hypothetical protein SORBIDRAFT_01g040155 [Sorghum bicolor]
Length = 904
Score = 824 bits (2128), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/977 (48%), Positives = 625/977 (63%), Gaps = 104/977 (10%)
Query: 3 MDMDMHIPLPEELELLEANY---------------QDLDPPEQDPDPP--EPVPPDSLPL 45
M+MDM +P P+ELE +E++ + PP D D P P P +S
Sbjct: 1 MEMDMDMPDPDELEWMESHGLVPEEEEDAYLVDPDEGFVPPPGDSDQPCDSPQPQESAAP 60
Query: 46 EINGHKRPRSDTPKSPIDVDEPQFDEKRSRIVDNDDEDWLRYSPPPPQARDDARVEVEEK 105
N P P + + + + R V+ +DEDWLRYSPPP + V EK
Sbjct: 61 RANEASGGLKRPPPPPPSEQDEEEERSKRRNVEQEDEDWLRYSPPPA-----PEIVVAEK 115
Query: 106 FVSRYASEIDGDCLPVTAPSGGDRVYVKISSSGVEER-VKKLDVRAH-----SN--SLTS 157
+SR+ASEI GD +PVTAP+G +RVY K++ G+ R + AH SN L S
Sbjct: 116 TISRFASEIHGDSVPVTAPNG-ERVYAKLAMEGLVGRGISGTRQGAHFSNPNSNHKGLLS 174
Query: 158 EPIDVLLQKVEQEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQT 217
E L ++ EQEA KAL S++ + P+V E+LWV+KYAPNSFTELLSDE T
Sbjct: 175 ESFHSLTRRAEQEALAKALQESTDSIDHVACSVTPLVTEKLWVEKYAPNSFTELLSDEHT 234
Query: 218 NREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNG 277
NREVLLWLKQWDS VFGS IR+T ++VLSALRRHS+ N + F++ G S
Sbjct: 235 NREVLLWLKQWDSSVFGSHIRATGDDVLSALRRHSSTIHKNASNRNFFSKSKGGPVAS-- 292
Query: 278 NFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGY 337
++ L ++SN +G+ S+ KK+ PEQKVLLLCGPPGLGKTTLAHVAA+HCGY
Sbjct: 293 --QDDTPLNAQSSNPEGLGGSFSKKSSVDNTPEQKVLLLCGPPGLGKTTLAHVAARHCGY 350
Query: 338 HVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKM 397
HVVE+NASDDRS+S+IE KILDVVQMNS+M+DS+PKCLVIDEIDGALGDGKGAVEVILKM
Sbjct: 351 HVVEINASDDRSASSIETKILDVVQMNSIMSDSKPKCLVIDEIDGALGDGKGAVEVILKM 410
Query: 398 VSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVH 457
++AE+ +N+ + +E Q K S++ + A LLRP
Sbjct: 411 INAEKSNNSDRSTNGEETQGRKASRRSH-RTAKLLRP----------------------- 446
Query: 458 VFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNV 517
P++SRVV+R H + + + ECDIRSCLNTLQFL+KK+ LN+
Sbjct: 447 ----PTISRVVNR--HWTDEKYIPA------------ECDIRSCLNTLQFLNKKRVALNI 488
Query: 518 MDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDY 577
SQV+G+KD S+S D+WK++ QKR+ KR S S N + + L +LISNRGDY
Sbjct: 489 TAFDSQVIGQKDKSKSIRDVWKQVLQKRRLKRSGKS-ESLFNEDKDINSLFTLISNRGDY 547
Query: 578 DVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITV 637
+V DGIHEN L+L YHDP++ KTVKCLD LG SD + QY+ RTQQMPL+ YQPP+AIT+
Sbjct: 548 EVTMDGIHENFLKLSYHDPMLQKTVKCLDILGFSDSLTQYVYRTQQMPLHAYQPPIAITI 607
Query: 638 HRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPL 697
R+V+Q++KPN+EWPK+ QR R +EK D+ K+W +++ P++SRHLS ES VED SP
Sbjct: 608 SRMVAQVEKPNIEWPKALQRSRALLLEKKDMLKTWQNQMSPFVSRHLSVESFVEDIASPF 667
Query: 698 LHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVS 757
LHILSP +LRPVAL+LLS +EK++LAQLV MVSYS+TY+NTK P + V H+VS
Sbjct: 668 LHILSPLSLRPVALNLLSEREKDELAQLVDTMVSYSVTYRNTKFAPQGKANISVVPHEVS 727
Query: 758 TLSFDPPINEFITFKGYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKENM 817
+ S PPIN+ I FKGY+S H L+LA+KQVLVHEVEKQ+I++ + GK +
Sbjct: 728 SFSLYPPINDVINFKGYQSEHIGLSLAMKQVLVHEVEKQKIIKDSAGKL----------L 777
Query: 818 DLAGEEDSKTESAKTNNAAVSAKLIEKSKSLP---YSRQCNPSTSTVLTTLDSSRSSTAS 874
+ + + D K+E++ +A+ K + + +P +S + N + S+ +TL+ +S ++
Sbjct: 778 NQSNDGDMKSEAS----SAIRKKTV--ANPIPPALHSSKDNSNCSS--STLEMQSNSASN 829
Query: 875 VKPKSSGDTKKSFRSSSSFFDRFRK---LSGKVSQDNDNAVQKATVERDSLPLLFKFNEG 931
V K S KK ++FFDRFRK + K +D + AT++RDS PL+FK+NEG
Sbjct: 830 VNGKDSVPAKKHSSRPTNFFDRFRKERPVDAKTH--SDVGLHGATLQRDSRPLIFKYNEG 887
Query: 932 FTNAVKRPVRMRDFLLS 948
FTNAVKRPVR+RD LLS
Sbjct: 888 FTNAVKRPVRVRDLLLS 904
>gi|224057579|ref|XP_002299277.1| predicted protein [Populus trichocarpa]
gi|222846535|gb|EEE84082.1| predicted protein [Populus trichocarpa]
Length = 500
Score = 604 bits (1557), Expect = e-170, Method: Compositional matrix adjust.
Identities = 328/504 (65%), Positives = 369/504 (73%), Gaps = 57/504 (11%)
Query: 5 MDMHIPLPEELELLEAN---YQD-LDPPEQDP---DP---PEPVPPDSLPL-EINGH-KR 52
M+M IPLP+ELELLEAN YQD LDPP DP P PE PP S +IN + KR
Sbjct: 1 MEMDIPLPDELELLEANSHFYQDYLDPPSPDPCTYSPQLLPEQSPPQSPSAPQINDYNKR 60
Query: 53 PRSDTPKSPIDVDEPQFDEKRSRIVDN-----DDEDWLRYSPPPPQARDDARVEVEEK-- 105
PRSD P SP D FDEKRS+I D+ DDEDWLR Q R+ E +
Sbjct: 61 PRSDGPDSPNQEDAVLFDEKRSKIDDDTGPEVDDEDWLRQV----QDRNGGNEEERVEVV 116
Query: 106 --------FVSRYASEIDGDCLPVTAPSGGDRVYVKISSSGVEERVKKLDVRAHSNSLTS 157
VSRY SEIDGD +PVTAPSGGDRVY KI E+ KKLD ++ SN L S
Sbjct: 117 VEEEEKEKIVSRYVSEIDGDFIPVTAPSGGDRVYAKICRVDTEQGAKKLDFKSQSNGLIS 176
Query: 158 EPIDVLLQKVEQEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQT 217
EPI+VLLQ++EQEAF KAL +SSE Q+D LPE V+HE+LWVDKYAPNSFTELLSDEQT
Sbjct: 177 EPINVLLQRMEQEAFTKALQASSEDQNDDILPETQVMHEKLWVDKYAPNSFTELLSDEQT 236
Query: 218 NREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNG 277
NREVLLW KQWDSCVFGS+IRSTS+++LSALRRHS+I+Q+ K +DS+F KN+GN WS G
Sbjct: 237 NREVLLWFKQWDSCVFGSDIRSTSDDILSALRRHSSIAQHPKPSDSTFFSKNKGNIWSRG 296
Query: 278 NFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGY 337
NFR+SNNLE ENS SKG QDSW KK+R TGPPEQK+LLLCGPPGLGKTTLAHVAAKHCGY
Sbjct: 297 NFRHSNNLEQENSKSKGFQDSWTKKSRPTGPPEQKILLLCGPPGLGKTTLAHVAAKHCGY 356
Query: 338 HVVE--------------------------VNASDDRSSSTIENKILDVVQMNSVMADSR 371
VVE +NASDDRSSSTIE KILDVVQMNSVMADSR
Sbjct: 357 RVVELFILCLFKVTLIHFSNLNVLQFETVQINASDDRSSSTIEAKILDVVQMNSVMADSR 416
Query: 372 PKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASL 431
PKCLVIDEIDGAL DGKGAVEV+LKMV +ERKS+T KENV K +Q ++S KKG K ASL
Sbjct: 417 PKCLVIDEIDGALSDGKGAVEVLLKMVFSERKSDTGKENVTKGEQFGRVSSKKGRKTASL 476
Query: 432 LRPVICICNDLYAPALRSLRQIAK 455
RPVICICND+YAPALR LRQ+AK
Sbjct: 477 TRPVICICNDIYAPALRPLRQVAK 500
>gi|167997942|ref|XP_001751677.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696775|gb|EDQ83112.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1081
Score = 587 bits (1512), Expect = e-164, Method: Compositional matrix adjust.
Identities = 372/899 (41%), Positives = 525/899 (58%), Gaps = 96/899 (10%)
Query: 89 PPP---------PQARDDARVEVEE-----KFVSRYASEIDGDCLPVTAPSGGDRVYVKI 134
PPP P+ +++ +EV E K R ++IDGD +P+T GDRVY
Sbjct: 238 PPPATEEVCHMSPRNQEEEYIEVPEVPTSCKLPRRCVTDIDGDFIPITG-LDGDRVY--- 293
Query: 135 SSSGVEERVKKLDVRA-HSNSLTSEPIDVLLQKVEQEAFNKALNSSSEGQ-SDRSLPEKP 192
S+ VE ++ A H+ L EPI +++++E+E+F + + +S + S ++ P
Sbjct: 294 -SAKVEPVKANYNLTALHNKDLLGEPIAKMIERIERESFEQVIAASDKKMLSADTIGTVP 352
Query: 193 VV-HEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRH 251
HE LWVDKYAP SFTELLSDE+TNREVL WLKQWD CVFGS+ STSEEVL++LRR
Sbjct: 353 ASEHEDLWVDKYAPRSFTELLSDEKTNREVLRWLKQWDPCVFGSKRYSTSEEVLTSLRRQ 412
Query: 252 STISQNKKQNDSSFTRKNRGNRWSNGNFRNSNN--LEYENS--NSKGIQDSWHKKTRSTG 307
+T N G R G+F N+ N + Y N NS + ++ +
Sbjct: 413 ATHLHGNV---------NMGGR---GSFNNNVNKSMAYRNDTFNSDSTRKVATEEKSTLD 460
Query: 308 PPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM 367
PE+KVLLLCGPPGLGKTTLAHVAA+HCGY VVE+NASDDR ++T++ KILD +QM SV
Sbjct: 461 RPEEKVLLLCGPPGLGKTTLAHVAARHCGYRVVEINASDDRVATTLQGKILDAIQMKSVT 520
Query: 368 ADSRPKCLVIDEIDGAL--GDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKG 425
D+RP CLVIDEIDGAL +GKGA++ +L++++A++KS+ KEN +E + SKK G
Sbjct: 521 GDNRPNCLVIDEIDGALSGAEGKGAIDSLLEIINADKKSSLGKENEMQEGVTKVSSKKTG 580
Query: 426 CKKASLL-RPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSS 484
L RPVICICND YAPALR LRQ+A+VHVF+QPSVSRVVSR+++ + + S
Sbjct: 581 GSAVRRLSRPVICICNDFYAPALRKLRQVARVHVFVQPSVSRVVSRVRYSIMPQHLPVSE 640
Query: 485 IALTTLAEYTECDIRSCLN---TLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEI 541
AE + +S L T Q +D+GSQVVGRKDM+ S FDIW EI
Sbjct: 641 ---PEEAELEDAVFQSNLELPMTFQ-----------LDVGSQVVGRKDMTSSIFDIWGEI 686
Query: 542 FQKRKTKR---LRNSVSS---SSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHD 595
F KRK + +R V + EF + L SN GDYD+ GIHENIL ++Y D
Sbjct: 687 FHKRKVRAGSGMRGLVEMPEIGNQDHKEFVRRYGLFSNHGDYDLTMSGIHENILHMRYLD 746
Query: 596 PVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSY 655
P + KTV+ L+ +G+S++ +I+ QQ L YQP I + LV+Q ++P ++WPK +
Sbjct: 747 PSLEKTVEALEWMGDSEIFSHHIIAKQQFHLLAYQPLPMIAIRGLVAQQERPQVQWPKQH 806
Query: 656 QRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLS 715
Q R KM++ SW + ISR LS L D ++PLL I++PPT+RPVA LL+
Sbjct: 807 QNSRTEQAVKMEMLNSWLGSMTASISRALSPVCLGLDIVTPLLTIITPPTIRPVATQLLT 866
Query: 716 AKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYR 775
+KEK+++ QLV M+ + L+Y++ K+ L + G + H S+L+ DPPI+ + +K +
Sbjct: 867 SKEKDEIVQLVDTMLGFGLSYRHPKAGMLKADHGID-GH--SSLTLDPPIDTLVKYKEFT 923
Query: 776 SNHYVLALAVKQVLVHEVEKQRI-MQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTNN 834
+ + L+ + Q+L HEVE +RI + + +++ +A + + E K
Sbjct: 924 AGYRQLSSTLCQMLAHEVEIERIRREGALRENKMIAVNPTPKLTIDAPNKKDEERGKPPL 983
Query: 835 AAVSAKL------IEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFR 888
V L IE K + Y + SS+ S K R
Sbjct: 984 QLVEDPLQPCDEKIEVPKKMCY--------------ISSSKKSVPE-------QEKPQPR 1022
Query: 889 SSSSFFDRFRKLS-GKVSQDNDNAVQKATVERDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
S +FF+RF+K + V+ D + AT++RDS PLL+K++EG TNAVKRP+ +RDFL
Sbjct: 1023 RSMNFFERFKKSTQTDVTADVKAKEKLATLQRDSRPLLYKYHEGLTNAVKRPMFVRDFL 1081
>gi|2494124|gb|AAB80633.1| Similar to Saccharomyces CHL12 (gb|Z49259) [Arabidopsis thaliana]
Length = 505
Score = 497 bits (1280), Expect = e-137, Method: Compositional matrix adjust.
Identities = 269/448 (60%), Positives = 315/448 (70%), Gaps = 44/448 (9%)
Query: 46 EINGHKRPRSDTPKSPIDVDE--PQFDEKRSRIVDN----DDEDWLRYSPPPPQARDDAR 99
+I G KRPRS +++DE P D KRS+I DN +DEDWLR+SP
Sbjct: 64 DIKGCKRPRSLISDPIVNLDEVSPASD-KRSKIDDNRVEIEDEDWLRFSPVKEVVHVMEE 122
Query: 100 VEV----EEKFVSRYASEIDGDCLPVTAPSGGDRVYVKISSSGVEERVKKLDVRAHSNSL 155
E +E +SRYASEIDG+C P+TAP GGDRVY K + +E V KLDV+ SN L
Sbjct: 123 EEEVVIPQETMLSRYASEIDGECFPITAPDGGDRVYAKFCRALGDEEVNKLDVKDKSNGL 182
Query: 156 TSEPIDVLLQKVEQEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDE 215
+PI VLLQ+ E+EAFNK L +SSE Q++ E V+HE+LWVDKY+P+SFTELLSDE
Sbjct: 183 IKDPISVLLQQSEKEAFNKVLQASSEDQNETISAETSVMHEKLWVDKYSPSSFTELLSDE 242
Query: 216 QTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWS 275
QTNREVLLWLKQWD+ VFGSEIRST+E VLSAL+RHST S ++K +DS+FTRK + NRWS
Sbjct: 243 QTNREVLLWLKQWDASVFGSEIRSTTEAVLSALKRHSTTSHHQK-SDSAFTRKKQFNRWS 301
Query: 276 NGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHC 335
+F S N E N+N+ I D W+KK++ TGPPEQK+LLLCG PGLGKTTLAH+AAKHC
Sbjct: 302 KESFGYSKNAEVSNTNTADINDLWNKKSKLTGPPEQKILLLCGAPGLGKTTLAHIAAKHC 361
Query: 336 GYHVVEV----------------------------NASDDRSSSTIENKILDVVQMNSVM 367
GY VVEV NASD+RS+S IE +ILDVVQMNSV
Sbjct: 362 GYRVVEVFFNVSVCAFLILLFLCIMFNSTCVILQINASDERSASAIETRILDVVQMNSVT 421
Query: 368 ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCK 427
ADSRPKCLVIDEIDGALGDGKGAV+VILKMV AERK T KENV + K S KK +
Sbjct: 422 ADSRPKCLVIDEIDGALGDGKGAVDVILKMVLAERKHATGKENV----ENVKTSSKKDRR 477
Query: 428 KASLLRPVICICNDLYAPALRSLRQIAK 455
A L RPVICICNDLYAPALR LRQIAK
Sbjct: 478 TAPLSRPVICICNDLYAPALRPLRQIAK 505
>gi|222624619|gb|EEE58751.1| hypothetical protein OsJ_10242 [Oryza sativa Japonica Group]
Length = 1325
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 275/531 (51%), Positives = 343/531 (64%), Gaps = 63/531 (11%)
Query: 3 MDMDMHIPLPEELELLEAN---------YQDLDPPEQDPDPPEPVPPDSLPLEINGHKRP 53
M+ DM +P PEELE +E++ Y D PE + P D + P
Sbjct: 1 MEADMDMPDPEELEWMESHGLLPEEEEEYAYFDDPEDEGFLPAAAGAD------QPRRSP 54
Query: 54 RSDT--PKSPID-VDEPQF-----------DEKRS--RIVDNDD-----EDWLRYSPPPP 92
+ T P P D V E E+RS R VD +D EDWLRYSPPP
Sbjct: 55 QETTAAPSKPADEVSEGNLKRPPPPPPPEQGEERSKRRNVDREDSGDGDEDWLRYSPPP- 113
Query: 93 QARDDARVEV-EEKFVSRYASEIDGDCLPVTAPSGGDRVYVKISSSG--------VEERV 143
VEV EK +SR+AS+I GDC+ VTAP+G +RVY K+++ G +R
Sbjct: 114 ------VVEVVAEKTISRFASDIRGDCMSVTAPNG-ERVYAKVATDGLDGGGIGGTRQRT 166
Query: 144 KKLDVRAHSNSLTSEPIDVLLQKVEQEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKY 203
+ + L SE L + EQEA KAL S+E Q+ S P P+V EQLWV+KY
Sbjct: 167 RISKPNFNYKGLLSESFHSLTSRAEQEALAKALQESAETQNLESCPVTPLVTEQLWVEKY 226
Query: 204 APNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDS 263
+PNSFTELLSDE TNREVLLWLKQWDSCVFGS +R+T ++VLSALRRHS+ Q N +
Sbjct: 227 SPNSFTELLSDEHTNREVLLWLKQWDSCVFGSHVRATGDDVLSALRRHSSAIQKNSSNRN 286
Query: 264 SFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLG 323
F++ G S N + + SNS+ + S++K+ + PEQKVLLLCGPPGLG
Sbjct: 287 FFSKSKGGPGMSQDNMLQNAH----GSNSEDLTSSFNKRPTTDNAPEQKVLLLCGPPGLG 342
Query: 324 KTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGA 383
KTTLAHVAAKHCGYHVVE+NASDDRS+S+IE KILDV+QMNS+M+DS+PKCLVIDEIDGA
Sbjct: 343 KTTLAHVAAKHCGYHVVEINASDDRSASSIEPKILDVIQMNSIMSDSKPKCLVIDEIDGA 402
Query: 384 LGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLY 443
LGDGKGAVE ++AE+ +++ A++ Q K S KKG K L+RPVICICNDLY
Sbjct: 403 LGDGKGAVE-----INAEKNNSSNSSTSAEDTQVRK-SSKKGHKIPKLMRPVICICNDLY 456
Query: 444 APALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYT 494
APALR LRQ+AKVH+F+QP++SRVV+RLK+IC E KTS IAL+ LAEYT
Sbjct: 457 APALRQLRQVAKVHMFVQPTISRVVNRLKYICKKERFKTSPIALSALAEYT 507
Score = 295 bits (756), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 180/403 (44%), Positives = 235/403 (58%), Gaps = 73/403 (18%)
Query: 494 TECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNS 553
ECDIRSCLNTLQFL+KK+E LN+ SQV+GRKDMS+S D+WK++ QK+K KR+
Sbjct: 567 AECDIRSCLNTLQFLNKKREALNISGFDSQVIGRKDMSKSIIDVWKQVLQKKKLKRIEK- 625
Query: 554 VSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDL 613
V S+ + + D L SLISNRGDYDV DGIHEN L+L YHDP++ KT
Sbjct: 626 VDSNFSRGKDIDSLFSLISNRGDYDVTMDGIHENFLKLNYHDPMLQKT------------ 673
Query: 614 MHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWH 673
PP+AIT+ +LV+Q++KPN+EWPKS QR R +EK D K+W
Sbjct: 674 -----------------PPVAITISQLVAQVEKPNIEWPKSLQRCRTMLLEKKDKLKTWQ 716
Query: 674 SKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYS 733
+++ P ISRHLS ES VED SP LHI+SP +LRPVAL+LLS +EK++L QLV MVSYS
Sbjct: 717 NQMSPLISRHLSVESFVEDIASPFLHIISPSSLRPVALNLLSEREKDELVQLVDTMVSYS 776
Query: 734 LTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLALAVKQVLVHEV 793
+TY+NTK +P G+ VS DV +LS DP IN+ I FK V
Sbjct: 777 ITYRNTKLEPQERISGSMVSPDVPSLSLDPAINDIINFK--------------------V 816
Query: 794 EKQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTNNAAVSAKLIEKSKSLPYSRQ 853
EKQ+IM+ + GK + A+ G++ ++ ++ +A VS K KS
Sbjct: 817 EKQKIMKDSAGKLLNQAN--------EGDKRNEVSVSEKKSALVSTKSTSKS-------- 860
Query: 854 CNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDR 896
NP TTL SS +S+ K KK +FFDR
Sbjct: 861 -NP------TTLKMQLSSASSMSGKDPAPAKKHSNHGINFFDR 896
>gi|108707332|gb|ABF95127.1| ATPase, AAA family protein, expressed [Oryza sativa Japonica Group]
Length = 1002
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 275/556 (49%), Positives = 343/556 (61%), Gaps = 88/556 (15%)
Query: 3 MDMDMHIPLPEELELLEAN---------YQDLDPPEQDPDPPEPVPPDSLPLEINGHKRP 53
M+ DM +P PEELE +E++ Y D PE + P D + P
Sbjct: 1 MEADMDMPDPEELEWMESHGLLPEEEEEYAYFDDPEDEGFLPAAAGAD------QPRRSP 54
Query: 54 RSDT--PKSPID-VDEPQF-----------DEKRS--RIVDNDD-----EDWLRYSPPPP 92
+ T P P D V E E+RS R VD +D EDWLRYSPPP
Sbjct: 55 QETTAAPSKPADEVSEGNLKRPPPPPPPEQGEERSKRRNVDREDSGDGDEDWLRYSPPPV 114
Query: 93 QARDDARVEV-EEKFVSRYASEIDGDCLPVTAPSGGDRVYVKISSSG--------VEERV 143
VEV EK +SR+AS+I GDC+ VTAP+G +RVY K+++ G +R
Sbjct: 115 -------VEVVAEKTISRFASDIRGDCMSVTAPNG-ERVYAKVATDGLDGGGIGGTRQRT 166
Query: 144 KKLDVRAHSNSLTSEPIDVLLQKVEQEAFNK-------------------------ALNS 178
+ + L SE L + EQEA K AL
Sbjct: 167 RISKPNFNYKGLLSESFHSLTSRAEQEALAKTMLIAVGHKLNAVYLTDPYFAMVMKALQE 226
Query: 179 SSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIR 238
S+E Q+ S P P+V EQLWV+KY+PNSFTELLSDE TNREVLLWLKQWDSCVFGS +R
Sbjct: 227 SAETQNLESCPVTPLVTEQLWVEKYSPNSFTELLSDEHTNREVLLWLKQWDSCVFGSHVR 286
Query: 239 STSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDS 298
+T ++VLSALRRHS+ Q N + F++ G S N + + SNS+ + S
Sbjct: 287 ATGDDVLSALRRHSSAIQKNSSNRNFFSKSKGGPGMSQDNMLQNAH----GSNSEDLTSS 342
Query: 299 WHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKIL 358
++K+ + PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVE+NASDDRS+S+IE KIL
Sbjct: 343 FNKRPTTDNAPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEINASDDRSASSIEPKIL 402
Query: 359 DVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPE 418
DV+QMNS+M+DS+PKCLVIDEIDGALGDGKGAVE ++AE+ +++ A++ Q
Sbjct: 403 DVIQMNSIMSDSKPKCLVIDEIDGALGDGKGAVE-----INAEKNNSSNSSTSAEDTQVR 457
Query: 419 KISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNE 478
K S KKG K L+RPVICICNDLYAPALR LRQ+AKVH+F+QP++SRVV+RLK+IC E
Sbjct: 458 K-SSKKGHKIPKLMRPVICICNDLYAPALRQLRQVAKVHMFVQPTISRVVNRLKYICKKE 516
Query: 479 SMKTSSIALTTLAEYT 494
KTS IAL+ LAEYT
Sbjct: 517 RFKTSPIALSALAEYT 532
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 232/457 (50%), Positives = 295/457 (64%), Gaps = 49/457 (10%)
Query: 494 TECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNS 553
ECDIRSCLNTLQFL+KK+E LN+ SQV+GRKDMS+S D+WK++ QK+K KR+
Sbjct: 592 AECDIRSCLNTLQFLNKKREALNISGFDSQVIGRKDMSKSIIDVWKQVLQKKKLKRIEK- 650
Query: 554 VSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDL 613
V S+ + + D L SLISNRGDYDV DGIHEN L+L YHDP++ KTVKCLD LG SD
Sbjct: 651 VDSNFSRGKDIDSLFSLISNRGDYDVTMDGIHENFLKLNYHDPMLQKTVKCLDILGVSDS 710
Query: 614 MHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWH 673
+ QY+ RTQQM L+VYQPP+AIT+ +LV+Q++KPN+EWPKS QR R +EK D K+W
Sbjct: 711 LMQYVYRTQQMSLHVYQPPVAITISQLVAQVEKPNIEWPKSLQRCRTMLLEKKDKLKTWQ 770
Query: 674 SKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYS 733
+++ P ISRHLS ES VED SP LHI+SP +LRPVAL+LLS +EK++L QLV MVSYS
Sbjct: 771 NQMSPLISRHLSVESFVEDIASPFLHIISPSSLRPVALNLLSEREKDELVQLVDTMVSYS 830
Query: 734 LTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLALAVKQVLVHEV 793
+TY+NTK +P G+ VS DV +LS DP IN+ I FK V
Sbjct: 831 ITYRNTKLEPQERISGSMVSPDVPSLSLDPAINDIINFK--------------------V 870
Query: 794 EKQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTNNAAVSAKLIEKSKSLPYSRQ 853
EKQ+IM+ + GK + A+ G++ ++ ++ +A VS K KS
Sbjct: 871 EKQKIMKDSAGKLLNQAN--------EGDKRNEVSVSEKKSALVSTKSTSKS-------- 914
Query: 854 CNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDRFRK---LSGKVSQDNDN 910
NP TTL SS +S+ K KK +FFDRFRK + K ND
Sbjct: 915 -NP------TTLKMQLSSASSMSGKDPAPAKKHSNHGINFFDRFRKERPVDAKAR--NDA 965
Query: 911 AVQKATVERDSLPLLFKFNEGFTNAVKRPVRMRDFLL 947
Q AT RDS PL+FK+NEGFTNAVKRPV++RD LL
Sbjct: 966 GQQVATTLRDSRPLIFKYNEGFTNAVKRPVKVRDLLL 1002
>gi|29893577|gb|AAP06831.1| unknown protein [Oryza sativa Japonica Group]
Length = 973
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 275/556 (49%), Positives = 343/556 (61%), Gaps = 88/556 (15%)
Query: 3 MDMDMHIPLPEELELLEAN---------YQDLDPPEQDPDPPEPVPPDSLPLEINGHKRP 53
M+ DM +P PEELE +E++ Y D PE + P D + P
Sbjct: 1 MEADMDMPDPEELEWMESHGLLPEEEEEYAYFDDPEDEGFLPAAAGAD------QPRRSP 54
Query: 54 RSDT--PKSPID-VDEPQF-----------DEKRS--RIVDNDD-----EDWLRYSPPPP 92
+ T P P D V E E+RS R VD +D EDWLRYSPPP
Sbjct: 55 QETTAAPSKPADEVSEGNLKRPPPPPPPEQGEERSKRRNVDREDSGDGDEDWLRYSPPP- 113
Query: 93 QARDDARVEV-EEKFVSRYASEIDGDCLPVTAPSGGDRVYVKISSSG--------VEERV 143
VEV EK +SR+AS+I GDC+ VTAP+G +RVY K+++ G +R
Sbjct: 114 ------VVEVVAEKTISRFASDIRGDCMSVTAPNG-ERVYAKVATDGLDGGGIGGTRQRT 166
Query: 144 KKLDVRAHSNSLTSEPIDVLLQKVEQEAFNK-------------------------ALNS 178
+ + L SE L + EQEA K AL
Sbjct: 167 RISKPNFNYKGLLSESFHSLTSRAEQEALAKTMLIAVGHKLNAVYLTDPYFAMVMKALQE 226
Query: 179 SSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIR 238
S+E Q+ S P P+V EQLWV+KY+PNSFTELLSDE TNREVLLWLKQWDSCVFGS +R
Sbjct: 227 SAETQNLESCPVTPLVTEQLWVEKYSPNSFTELLSDEHTNREVLLWLKQWDSCVFGSHVR 286
Query: 239 STSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDS 298
+T ++VLSALRRHS+ Q N + F++ G S N + + SNS+ + S
Sbjct: 287 ATGDDVLSALRRHSSAIQKNSSNRNFFSKSKGGPGMSQDNMLQNAH----GSNSEDLTSS 342
Query: 299 WHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKIL 358
++K+ + PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVE+NASDDRS+S+IE KIL
Sbjct: 343 FNKRPTTDNAPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEINASDDRSASSIEPKIL 402
Query: 359 DVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPE 418
DV+QMNS+M+DS+PKCLVIDEIDGALGDGKGAVE ++AE+ +++ A++ Q
Sbjct: 403 DVIQMNSIMSDSKPKCLVIDEIDGALGDGKGAVE-----INAEKNNSSNSSTSAEDTQVR 457
Query: 419 KISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNE 478
K S KKG K L+RPVICICNDLYAPALR LRQ+AKVH+F+QP++SRVV+RLK+IC E
Sbjct: 458 K-SSKKGHKIPKLMRPVICICNDLYAPALRQLRQVAKVHMFVQPTISRVVNRLKYICKKE 516
Query: 479 SMKTSSIALTTLAEYT 494
KTS IAL+ LAEYT
Sbjct: 517 RFKTSPIALSALAEYT 532
Score = 352 bits (904), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 212/457 (46%), Positives = 272/457 (59%), Gaps = 78/457 (17%)
Query: 494 TECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNS 553
ECDIRSCLNTLQFL+KK+E LN+ SQV+GRKDMS+S D+WK++ QK+K KR+
Sbjct: 592 AECDIRSCLNTLQFLNKKREALNISGFDSQVIGRKDMSKSIIDVWKQVLQKKKLKRIEK- 650
Query: 554 VSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDL 613
V S+ + + D L SLISNRGDYDV DGIHEN L+L YHDP++ KT
Sbjct: 651 VDSNFSRGKDIDSLFSLISNRGDYDVTMDGIHENFLKLNYHDPMLQKT------------ 698
Query: 614 MHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWH 673
PP+AIT+ +LV+Q++KPN+EWPKS QR R +EK D K+W
Sbjct: 699 -----------------PPVAITISQLVAQVEKPNIEWPKSLQRCRTMLLEKKDKLKTWQ 741
Query: 674 SKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYS 733
+++ P ISRHLS ES VED SP LHI+SP +LRPVAL+LLS +EK++L QLV MVSYS
Sbjct: 742 NQMSPLISRHLSVESFVEDIASPFLHIISPSSLRPVALNLLSEREKDELVQLVDTMVSYS 801
Query: 734 LTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLALAVKQVLVHEV 793
+TY+NTK +P G+ VS DV +LS DP IN+ I FK V
Sbjct: 802 ITYRNTKLEPQERISGSMVSPDVPSLSLDPAINDIINFK--------------------V 841
Query: 794 EKQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTNNAAVSAKLIEKSKSLPYSRQ 853
EKQ+IM+ + GK + A+ G++ ++ ++ +A VS K KS
Sbjct: 842 EKQKIMKDSAGKLLNQAN--------EGDKRNEVSVSEKKSALVSTKSTSKS-------- 885
Query: 854 CNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDRFRK---LSGKVSQDNDN 910
NP TTL SS +S+ K KK +FFDRFRK + K ND
Sbjct: 886 -NP------TTLKMQLSSASSMSGKDPAPAKKHSNHGINFFDRFRKERPVDAKAR--NDA 936
Query: 911 AVQKATVERDSLPLLFKFNEGFTNAVKRPVRMRDFLL 947
Q AT RDS PL+FK+NEGFTNAVKRPV++RD LL
Sbjct: 937 GQQVATTLRDSRPLIFKYNEGFTNAVKRPVKVRDLLL 973
>gi|218192489|gb|EEC74916.1| hypothetical protein OsI_10859 [Oryza sativa Indica Group]
Length = 897
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 267/523 (51%), Positives = 329/523 (62%), Gaps = 82/523 (15%)
Query: 3 MDMDMHIPLPEELELLEAN---------YQDLDPPEQDPDPPEPVPPDSLPLEINGHKRP 53
M+ DM +P PEELE +E++ Y D PE + P D + P
Sbjct: 1 MEADMDMPDPEELEWMESHGLLPEEEEEYAYFDDPEDEGFLPAAAGAD------QPRRTP 54
Query: 54 RSDT--PKSPID-VDEPQF-----------DEKRS--RIVDNDD-----EDWLRYSPPPP 92
+ T P P D V E E+RS R VD +D EDWL+YS PP
Sbjct: 55 QETTAAPAKPADEVSEGNLKRPPPPPPPEQGEERSKRRNVDREDSGDGDEDWLQYSLPP- 113
Query: 93 QARDDARVEV-EEKFVSRYASEIDGDCLPVTAPSGGDRVYVKISSSGVEERVKKLDVRAH 151
VEV EK +SR+AS+I GDC+ VTAP+G
Sbjct: 114 ------VVEVVAEKTISRFASDIRGDCMSVTAPNG------------------------- 142
Query: 152 SNSLTSEPIDVLLQKVEQEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTEL 211
L SE L + EQEA KAL S+E Q+ S P P+V EQLWV+KY+PNSFTEL
Sbjct: 143 ---LLSESFHSLTSRAEQEALAKALQESAETQNLESCPVTPLVTEQLWVEKYSPNSFTEL 199
Query: 212 LSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRG 271
LSDE TNREVLLWLKQWDSCVFGS +R+T ++VLSALRRHS+ Q N + F++ G
Sbjct: 200 LSDEHTNREVLLWLKQWDSCVFGSHVRATGDDVLSALRRHSSAIQKNSSNRNFFSKSKGG 259
Query: 272 NRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVA 331
S N + + SNS+ + S++K+ + PEQKVLLLCGPPGLGKTTLAHVA
Sbjct: 260 PGMSQDNMLQNAH----GSNSEDLTSSFNKRPTTDNAPEQKVLLLCGPPGLGKTTLAHVA 315
Query: 332 AKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAV 391
AKHCGYHVVE+NASDDRS+S+IE KILDV+QMNS+M+DS+PKCLVIDEIDGALGDGKGAV
Sbjct: 316 AKHCGYHVVEINASDDRSASSIEPKILDVIQMNSIMSDSKPKCLVIDEIDGALGDGKGAV 375
Query: 392 EVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLR 451
E ++AE+ +++ A++ Q K S KKG K L+RPVICICNDLYAPALR LR
Sbjct: 376 E-----INAEKNNSSNSSTSAEDTQVRK-SSKKGHKIPKLMRPVICICNDLYAPALRQLR 429
Query: 452 QIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYT 494
Q+AKVH+F+QP++SRVV+RLK+IC E KTS IAL+ LAEYT
Sbjct: 430 QVAKVHMFVQPTISRVVNRLKYICKKERFKTSPIALSALAEYT 472
Score = 322 bits (824), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 198/440 (45%), Positives = 256/440 (58%), Gaps = 78/440 (17%)
Query: 494 TECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNS 553
ECDIRSCLNTLQFL+KK+E LN+ SQV+GRKDMS+S D+WK++ QK+K KR+
Sbjct: 532 AECDIRSCLNTLQFLNKKREALNISGFDSQVIGRKDMSKSIIDVWKQVLQKKKLKRIEK- 590
Query: 554 VSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDL 613
V S+ + + D L SLISNRGDYDV DGIHEN L+L YHDP++ KT
Sbjct: 591 VDSNFSRGKDIDSLFSLISNRGDYDVTMDGIHENFLKLNYHDPMLQKT------------ 638
Query: 614 MHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWH 673
PP+AIT+ +LV+Q++KPN+EWPKS QR R +EK D K+W
Sbjct: 639 -----------------PPVAITISQLVAQVEKPNIEWPKSLQRCRTMLLEKKDKLKTWQ 681
Query: 674 SKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYS 733
+++ P ISRHLS ES VED SP LHI+SP +LRPVAL+LLS +EK++L QLV MVSYS
Sbjct: 682 NQMSPLISRHLSVESFVEDIASPFLHIISPSSLRPVALNLLSEREKDELVQLVDTMVSYS 741
Query: 734 LTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLALAVKQVLVHEV 793
+TY+NTK +P G+ VS DV +LS DP IN+ I FK V
Sbjct: 742 ITYRNTKLEPQERISGSMVSPDVPSLSLDPAINDIINFK--------------------V 781
Query: 794 EKQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTNNAAVSAKLIEKSKSLPYSRQ 853
EKQ+IM+ + GK + A+ G++ ++ ++ +A VS K KS
Sbjct: 782 EKQKIMKDSAGKLLNQAN--------EGDKRNEVSVSEKKSALVSTKSTSKS-------- 825
Query: 854 CNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDRFRK---LSGKVSQDNDN 910
NP TTL SS +S+ K KK +FFDRFRK + K ND
Sbjct: 826 -NP------TTLKMQLSSASSMSGKDPAPAKKHSNHGINFFDRFRKERPVDAKAR--NDA 876
Query: 911 AVQKATVERDSLPLLFKFNE 930
Q AT RDS PL+FK+NE
Sbjct: 877 GQQVATTLRDSRPLIFKYNE 896
>gi|414865976|tpg|DAA44533.1| TPA: hypothetical protein ZEAMMB73_048051 [Zea mays]
Length = 455
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 237/459 (51%), Positives = 317/459 (69%), Gaps = 23/459 (5%)
Query: 494 TECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNS 553
ECDIRSCLNTLQFL+KK+ LN+ I SQV+G+KD S+S D+WK++ QK++ KR
Sbjct: 16 AECDIRSCLNTLQFLNKKRVALNITAIDSQVIGQKDKSKSILDVWKQVLQKKRLKR-AGK 74
Query: 554 VSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDL 613
S N + DFL +LISNRGDY+V DGIHEN L+L YHDP++ KTVKCLD LG SD
Sbjct: 75 AESLFNEDKDIDFLFTLISNRGDYEVTMDGIHENFLRLSYHDPMLQKTVKCLDILGVSDS 134
Query: 614 MHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWH 673
+ QY+ RTQQMPL+ YQPP+AIT+ R+V+Q++KPN+ WPK+ QR R +EK D+ K+W
Sbjct: 135 LTQYVYRTQQMPLHAYQPPIAITISRMVAQVEKPNINWPKALQRSRALLLEKKDMLKTWQ 194
Query: 674 SKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYS 733
+++ P++SRHLS ES VED+ SPLLHILSP +LRPVAL+LLS +EK++L QLV MVSYS
Sbjct: 195 NQMSPFVSRHLSVESFVEDTASPLLHILSPLSLRPVALNLLSEREKDELVQLVDTMVSYS 254
Query: 734 LTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLALAVKQVLVHEV 793
+TY+NTK P + V H+VS+LS PPIN+ I F+GY+S H L+LA+KQVLVHEV
Sbjct: 255 VTYRNTKFVPQEKANLSVVPHEVSSLSLYPPINDVINFEGYQSEHIGLSLAMKQVLVHEV 314
Query: 794 EKQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTNNAAVSAKLIEKS-KSLPYSR 852
EKQ+I++ + GK ++ + + + K+E+ T A I + S S
Sbjct: 315 EKQKIIKDSAGKL----------LNQSNDGNMKSEALSTIRKKTVANSIRPALHSSKDSS 364
Query: 853 QCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDRFRK---LSGKVSQDND 909
+CN S TL+ +S + V S KK +++FFDRFRK + K +D
Sbjct: 365 KCNSS------TLEMQSNSASIVNDNDSISAKKHSSRAANFFDRFRKERPVDAKTH--SD 416
Query: 910 NAVQKATVERDSLPLLFKFNEGFTNAVKRPVRMRDFLLS 948
+Q+AT++RDS PL+FK+NEGFTNAVKRPVR+RD LLS
Sbjct: 417 VGLQRATLQRDSRPLIFKYNEGFTNAVKRPVRVRDLLLS 455
>gi|296084655|emb|CBI25792.3| unnamed protein product [Vitis vinifera]
Length = 297
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 207/295 (70%), Positives = 243/295 (82%)
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
E +KT+S AL LAEYTECDIRSCLNTLQFL+KK + LNV +I SQVVG+KDMSRS FDI
Sbjct: 2 EGLKTNSTALAALAEYTECDIRSCLNTLQFLNKKNQTLNVFEISSQVVGQKDMSRSIFDI 61
Query: 538 WKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPV 597
WKEIFQ RK KR + S + S +SN FDFL+ LISNRGDYD+I DGIHENI QL YHDP+
Sbjct: 62 WKEIFQNRKMKRAKRSDNCCSGMSNGFDFLYPLISNRGDYDLILDGIHENIFQLHYHDPI 121
Query: 598 MLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQR 657
M KTVKCL+ LG SDL+HQY+MRTQQM L VYQP AI++HRL++Q+QKP +EWPKS+ R
Sbjct: 122 MQKTVKCLNTLGISDLVHQYVMRTQQMSLNVYQPLTAISLHRLIAQVQKPIIEWPKSFMR 181
Query: 658 YRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAK 717
YR FMEK DI +SWH+KI PYISRHLS +S VE +SPLLHILSPPTLRPVALHLLS +
Sbjct: 182 YRTTFMEKRDILRSWHNKIAPYISRHLSIKSFVEALVSPLLHILSPPTLRPVALHLLSER 241
Query: 718 EKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFK 772
E+NDLAQL++AMVSYS+TYKN KSDPL +E + D +LSFDPPI +F+TFK
Sbjct: 242 ERNDLAQLINAMVSYSITYKNMKSDPLHGTQLHEAASDGLSLSFDPPIADFVTFK 296
>gi|297741996|emb|CBI33783.3| unnamed protein product [Vitis vinifera]
Length = 382
Score = 421 bits (1081), Expect = e-114, Method: Compositional matrix adjust.
Identities = 213/371 (57%), Positives = 255/371 (68%), Gaps = 56/371 (15%)
Query: 455 KVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYT-------------------- 494
+VH+F+QP+VSRVVSRLK+ICN E +KT+S AL L EYT
Sbjct: 14 QVHIFVQPTVSRVVSRLKYICNMEGLKTNSTALAALVEYTGELIFNLPFGVGNVVFVILK 73
Query: 495 ---------------------------------ECDIRSCLNTLQFLDKKKEILNVMDIG 521
+CDIRSCLNTLQFL+KK + LNV +I
Sbjct: 74 IRIASSYVFFTLSFSYLHCEFCLIFVELCFYFPKCDIRSCLNTLQFLNKKNQTLNVFEIS 133
Query: 522 SQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIF 581
SQVVG+KDMSRS FDI KE RK KR + S + S +SN FDFL+ LISNRGDYD+I
Sbjct: 134 SQVVGQKDMSRSIFDIRKE---NRKMKRAKRSDNCCSGMSNGFDFLYPLISNRGDYDLIL 190
Query: 582 DGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLV 641
DGIHENI QL YHDP+M + CL+ LG DL+HQY+MRTQQM L VYQP AI++H L+
Sbjct: 191 DGIHENIFQLHYHDPIMALSKSCLNTLGIFDLVHQYVMRTQQMSLNVYQPLTAISLHHLI 250
Query: 642 SQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHIL 701
+Q+QKP +EWPKS+ RYR FMEK DI +SWH+KI PYISRHLS +S VEDS+SPLLHIL
Sbjct: 251 AQVQKPIIEWPKSFMRYRMTFMEKRDILRSWHNKIAPYISRHLSIKSFVEDSVSPLLHIL 310
Query: 702 SPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSF 761
SPPTLR VALHLLS +E+NDLAQL++AMVSYS+TYKN KSDPL E + D +LSF
Sbjct: 311 SPPTLRSVALHLLSERERNDLAQLINAMVSYSITYKNMKSDPLHGTQLYEATSDGLSLSF 370
Query: 762 DPPINEFITFK 772
DPPI +F+TFK
Sbjct: 371 DPPIVDFVTFK 381
>gi|2494129|gb|AAB80638.1| T1G11.3 [Arabidopsis thaliana]
Length = 443
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 247/472 (52%), Positives = 300/472 (63%), Gaps = 64/472 (13%)
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNV-------------MDIGSQV 524
E MK S AL+ LAEYTECDIRSCLNTLQFL KKKE +NV +DIGSQV
Sbjct: 2 EGMKARSFALSALAEYTECDIRSCLNTLQFLYKKKETINVPSDKLRPAFFLFQIDIGSQV 61
Query: 525 VGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGI 584
VGRKDMS+S FDIWKEIF RK KR R++ +S S N FDFLHSL+S+RGDYD+IFDGI
Sbjct: 62 VGRKDMSKSLFDIWKEIFTTRKMKRERSNDASGSGAKN-FDFLHSLVSSRGDYDLIFDGI 120
Query: 585 HENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQ----PPLAITVHRL 640
HENILQL YHDPVM KT+ CLD LG SDL+H+YIMRTQQMPLY Q P L + +
Sbjct: 121 HENILQLHYHDPVMDKTISCLDGLGTSDLLHRYIMRTQQMPLYERQHSKRPFLLVLL--- 177
Query: 641 VSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHI 700
N++ R R +EK + +SWH KIPPYI RHLS +S VEDSISPLLHI
Sbjct: 178 -------NIKC----TRCRTLLVEKQESLRSWHHKIPPYIGRHLSIKSFVEDSISPLLHI 226
Query: 701 LSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLS 760
LSPPTLRPVA HLLS ++K LA LV M SYSLTYKN KSDP+L++L + + D L+
Sbjct: 227 LSPPTLRPVASHLLSDRQKEQLAGLVMLMCSYSLTYKNVKSDPVLSSLREDAASDALVLA 286
Query: 761 FDPPINEFITFKGYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHL--ADGYKENMD 818
DP + +FI FK + L K +L +VEKQ+I+Q + GKS L + K N D
Sbjct: 287 LDPHLFDFINFKLPED---LDCLIFKNMLKTQVEKQKILQASGGKSGILNKPEIKKINQD 343
Query: 819 LAGEEDSKTESAKTNNAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPK 878
LA KTN AA +S+ P + + PS S TA+
Sbjct: 344 LA---------KKTNAAA------NESQRTPVTSK-PPSVSV----------GTATTSKP 377
Query: 879 SSGDTKKSFRSSSSFFDRFRKLSGKVSQDNDNAVQKATVERDSLPLLFKFNE 930
+S D KK+ R++ +FFDRFRK S K +D ++ +AT +RDS PLLFKFNE
Sbjct: 378 NSSDVKKASRNALNFFDRFRK-SRKDYEDPEDVQNRATAKRDSRPLLFKFNE 428
>gi|384253246|gb|EIE26721.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coccomyxa subellipsoidea C-169]
Length = 772
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 274/850 (32%), Positives = 422/850 (49%), Gaps = 115/850 (13%)
Query: 127 GDRVYVKISSSGVEERVKKLDVRAHSNSLTSEPIDVLLQKVEQEAFNKALNSSSEGQSDR 186
G+RVY +++ + ++ + + L +PI VL+ +VEQ A+ ALN+ EG+
Sbjct: 8 GERVYCGLAAPDAGQLLRPQHHKRQGHFL-EKPISVLMAEVEQAAYESALNAPLEGEQPA 66
Query: 187 SLPEKPVV-----HEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTS 241
S E LWVD+YAP SF ELL DE+ NREV+ WLK WD CVFG +
Sbjct: 67 SASAAESKAEMDQGEDLWVDRYAPCSFLELLGDEEINREVVRWLKTWDKCVFGID----- 121
Query: 242 EEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHK 301
K+R +N ++ + KG
Sbjct: 122 --------------------------KHR-----------PSNKPHKAAAGKGPATKQGT 144
Query: 302 KTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVV 361
R P QK+LL+CG PGLGKTTLAHV A+HCGY VE+NASD+R+++T++ +I D V
Sbjct: 145 DVR----PPQKILLICGAPGLGKTTLAHVVARHCGYRTVEINASDERTAATLQARISDAV 200
Query: 362 QMNSVMADSRPKCLVIDEIDGALG--DGKGAVEVILKMVSA--ERKSNTA---------- 407
QM SVM RP C++IDEIDGA G +G+GA++ +LK+V A RK A
Sbjct: 201 QMQSVMGAGRPNCVIIDEIDGATGGSEGRGAIQALLKLVQAGGGRKEACASGAADEAGDA 260
Query: 408 -KENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSR 466
EN A +K ++KG + L RP+I ICNDLYAPALR LR IAK+ V R
Sbjct: 261 DDENAAGGTHGKK--RRKGGQ--PLCRPLIAICNDLYAPALRPLRAIAKI-------VER 309
Query: 467 VVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVG 526
+ SRL+ IC++E + ALTTL E TE D+RSCLNTLQFL K+ + +
Sbjct: 310 LSSRLRFICSSEGLSVDRTALTTLCERTEHDVRSCLNTLQFLSKRTRAIRSSHVSGVQCA 369
Query: 527 RKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHE 586
+KDM +SAF IW+E+F T ++ S+ + F+ L+S + + GD+ ++ G+ E
Sbjct: 370 QKDMVKSAFGIWQELF----TDKVAAGPGPSARANGGFERLYSTLGDFGDHGLVLAGLQE 425
Query: 587 NILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQK 646
N +Y D M +T D L + D + + + R + P A+ V +V+ Q+
Sbjct: 426 NFPAARYLDSHMARTAALADALADGDRLLRAVHRRSDFAALKFAPAHALAVRTIVAGPQR 485
Query: 647 PNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTL 706
+ WP S + + + + W + + P + LST + V + + L+ +++ +
Sbjct: 486 VQMRWPSSQADMHRRTVAQRAMLQGWLTDVHPTVFSTLSTATAVREVLPALVRVVN-RAV 544
Query: 707 RPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHD--VSTLSFDPP 764
RPVA HL +A+E+ +A +V ++++ LT + G++ +H T + PP
Sbjct: 545 RPVAPHLFTAEERAAMAAMVDLLLAHGLTLSLSPPSAQPAAHGHQTAHANLPETTALSPP 604
Query: 765 INEFITFKGYRSNHYVLALAVKQVLVHEVEKQRI--MQVTIGKSEHLADGYKENMDLAGE 822
++ + F G + V+AL ++Q++V +++ + I + G S A E +
Sbjct: 605 VHTLVLFPGVLHSGKVMALTIRQMVVQQLQLEAIRRREAVYGDSGSGAASTTEALPEDAT 664
Query: 823 EDSKTESAKTNNAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASV-KPKSSG 881
S+++ A+ S Q PS + R+ A+V K +G
Sbjct: 665 GTSESQGAQEG-----------------SSQRPPSGEKRYQLTVAQRAKEAAVTGAKKTG 707
Query: 882 DTKKSFRSSSSFFDRFRKLSGKVSQDN-----DNAVQKATVERDSLPLLFKFNEGFTNAV 936
+K +S+ D R+ S K Q Q + + +KF+EGFTNAV
Sbjct: 708 PVRK-----ASWLDALRQKSEKAGQHRPKPSAAEEAQDIASGKAGHAMRYKFHEGFTNAV 762
Query: 937 KRPVRMRDFL 946
KRPVRM+D +
Sbjct: 763 KRPVRMKDLI 772
>gi|414865977|tpg|DAA44534.1| TPA: hypothetical protein ZEAMMB73_048051 [Zea mays]
Length = 466
Score = 397 bits (1021), Expect = e-107, Method: Compositional matrix adjust.
Identities = 230/458 (50%), Positives = 294/458 (64%), Gaps = 39/458 (8%)
Query: 3 MDMDMHIPLPEELELLEANYQDLDPPEQDP---DPPE---------------PVPPDSLP 44
MDMDM +P P+ELE +E++ L P E+D DP E P P +S
Sbjct: 1 MDMDMEMPDPDELEWMESH--GLVPEEEDAYFDDPDEGFVLAPGDSDQPCNSPQPQESAA 58
Query: 45 LEINGHKRPRSDTPKSPIDVDEPQFDEKRSRIVDNDDEDWLRYSPPPPQARDDARVEVEE 104
N P P + + + + R V+ +DEDWLRYSPPP + V E
Sbjct: 59 PRANEAPGGLKRPPPPPPPEQDEEEERSKRRNVEQEDEDWLRYSPPPA-----PEIVVAE 113
Query: 105 KFVSRYASEIDGDCLPVTAPSGGDRVYVKISS--------SGVEERVKKLDVRAHSNSLT 156
K +SR+ASEI GD +PVTAP+G +RVY K++ SG + V+ + ++ L
Sbjct: 114 KTISRFASEIHGDSVPVTAPNG-ERVYAKLAMEGLVGRGISGTRQGVQFSNPNSNHKGLL 172
Query: 157 SEPIDVLLQKVEQEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQ 216
SE D L ++ EQEA KAL S++ + P+V E+LWV+KYAPNSFTELLSDE
Sbjct: 173 SESFDSLTRRAEQEALAKALQESTDSIDRVACSATPLVTEKLWVEKYAPNSFTELLSDEH 232
Query: 217 TNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSN 276
TNREVLLWLKQWDS VFGS IR+T ++VLSALRRHS+ Q N + F++ G S
Sbjct: 233 TNREVLLWLKQWDSIVFGSHIRATGDDVLSALRRHSSTIQKNASNRNFFSKSKGGPVAS- 291
Query: 277 GNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCG 336
++ L ++SN +G+ S+ KK+ PEQKVLLLCGPPGLGKTTLAHVA +HCG
Sbjct: 292 ---QDGTPLNAQSSNPEGLGGSFSKKSSVDNAPEQKVLLLCGPPGLGKTTLAHVAVRHCG 348
Query: 337 YHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILK 396
YHVVE+NASDDRS+S+IE KILDVVQMNS+M+DS+PKCLVIDEIDGALGDGKGAVEVILK
Sbjct: 349 YHVVEINASDDRSASSIETKILDVVQMNSIMSDSKPKCLVIDEIDGALGDGKGAVEVILK 408
Query: 397 MVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRP 434
M++AE+ +N+ K +E Q K S+K + A LLRP
Sbjct: 409 MINAEKSNNSDKSTNGEETQARKTSRKS-HRTAKLLRP 445
>gi|226508148|ref|NP_001141419.1| uncharacterized protein LOC100273529 [Zea mays]
gi|194704526|gb|ACF86347.1| unknown [Zea mays]
Length = 354
Score = 358 bits (919), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 189/372 (50%), Positives = 255/372 (68%), Gaps = 22/372 (5%)
Query: 581 FDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRL 640
DGIHEN L+L YHDP++ KTVKCLD LG SD + QY+ RTQQMPL+ YQPP+AIT+ R+
Sbjct: 1 MDGIHENFLRLSYHDPMLQKTVKCLDILGVSDSLTQYVYRTQQMPLHAYQPPIAITISRM 60
Query: 641 VSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHI 700
V+Q++KPN+ WPK+ QR R +EK D+ K+W +++ P++SRHLS ES VED+ SPLLHI
Sbjct: 61 VAQVEKPNINWPKALQRSRALLLEKKDMLKTWQNQMSPFVSRHLSVESFVEDTASPLLHI 120
Query: 701 LSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLS 760
LSP +LRPVAL+LLS +EK++L QLV MVSYS+TY+NTK P + V H+VS+LS
Sbjct: 121 LSPLSLRPVALNLLSEREKDELVQLVDTMVSYSVTYRNTKFVPQEKANLSVVPHEVSSLS 180
Query: 761 FDPPINEFITFKGYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLA 820
PPIN+ I F+GY+S H L+LA+KQVLVHEVEKQ+I++ + GK ++ +
Sbjct: 181 LYPPINDVINFEGYQSEHIGLSLAMKQVLVHEVEKQKIIKDSAGKL----------LNQS 230
Query: 821 GEEDSKTESAKTNNAAVSAKLIEKS-KSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKS 879
+ + K+E+ T A I + S S +CN S TL+ +S + V
Sbjct: 231 NDGNMKSEALSTIRKKTVANSIRPALHSSKDSSKCNSS------TLEMQSNSASIVNDND 284
Query: 880 SGDTKKSFRSSSSFFDRFRK---LSGKVSQDNDNAVQKATVERDSLPLLFKFNEGFTNAV 936
S KK +++FFDRFRK + K +D +Q+AT++RDS PL+FK+NEGFTNAV
Sbjct: 285 SISAKKHSSRAANFFDRFRKERPVDAKT--HSDVGLQRATLQRDSRPLIFKYNEGFTNAV 342
Query: 937 KRPVRMRDFLLS 948
KRPVR+RD LLS
Sbjct: 343 KRPVRVRDLLLS 354
>gi|195117224|ref|XP_002003149.1| GI17752 [Drosophila mojavensis]
gi|193913724|gb|EDW12591.1| GI17752 [Drosophila mojavensis]
Length = 993
Score = 350 bits (897), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 262/843 (31%), Positives = 397/843 (47%), Gaps = 118/843 (13%)
Query: 128 DRVYVKISSSGVEERVKKLDVRAHSNSLTSEPIDVLLQKVEQEAFNKALNSSSE-GQSDR 186
+R+YV+ S E+R +LD+ + ++LT + Q+V QEA L + Q
Sbjct: 245 ERLYVRFHSEEYEQR--QLDLLSARDNLTGSLLGEAKQQVWQEANELVLRRMAPPTQLVN 302
Query: 187 SLPEKPVVHE-QLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVL 245
P P V +LWVDKY P + +LLSDE TNR +L WLK WD VFG S E+
Sbjct: 303 PEPVAPSVDTGRLWVDKYKPRKYIDLLSDEMTNRSLLYWLKMWDKVVFGKVFHSKQEQQT 362
Query: 246 SALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRS 305
+ ++ ++ +++ N SF ++ G SNG +R + N+N +
Sbjct: 363 A----NTGVAASQQLN--SFNKRT-GKFESNGGWRQRKARQALNTNVDEL---------- 405
Query: 306 TGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNS 365
G P QKV LLCGPPGLGKTTLAH A+H GY+V E+NASDDRS + + + QM+S
Sbjct: 406 -GRPMQKVALLCGPPGLGKTTLAHTIARHAGYNVREINASDDRSPEAFKLALENGTQMSS 464
Query: 366 VM-ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKK 424
V+ D RP C+V+DEIDGA + ++E ++K VS D +K K
Sbjct: 465 VLNEDKRPNCIVLDEIDGA---PRQSIEYLVKFVS---------------DGIFSKAKSK 506
Query: 425 GCKKAS--LLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKT 482
G K L RP+ICICND+Y PALR LRQIA V F +R+ RL I + E +KT
Sbjct: 507 GAKAEHNVLRRPIICICNDIYDPALRPLRQIAFVVSFPPIDAARLAERLLQIAHKEHLKT 566
Query: 483 SSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIF 542
AL LAE + D+RSC++T+QF + +K L + D+ + +G+KD + FD+W IF
Sbjct: 567 DFGALIALAEKSGNDVRSCISTMQFFNAQKHCLTLQDVLNNNLGQKDRHQGLFDVWGAIF 626
Query: 543 Q-KRKTKRLRNS---------------VSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHE 586
+ +R K+L+ S +S ++ V N D +HS GDY+ + G++E
Sbjct: 627 RIQRPKKQLQQSSSNNAEEAAQVTMTNMSVATRVRNVLDVVHS----SGDYERLTQGVYE 682
Query: 587 NILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQK 646
N LQ + DP + L SD + I R Q +Y Y + H L + +
Sbjct: 683 NYLQQRMPDPNFTGICEALQWFCFSDALQHQIARQQNYSIYPYLQYGFVVWHLLFATLAW 742
Query: 647 PNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTL 706
P + +P + M + +IF++ I L+ D++ PLL + P L
Sbjct: 743 PKIAFPTRGFEFNQKSMNQRNIFQALRKGITTSAQGVGQGNILLLDTV-PLLKRILSPQL 801
Query: 707 RPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPIN 766
R VA+ LLS KE+ DL + MV LT+ KS + +P ++
Sbjct: 802 RSVAVQLLSQKEQYDLRHTIQVMVDLGLTFVQVKS-----------AEGHYVFQTEPDLD 850
Query: 767 EFITFKGYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSK 826
+F G+ L +Q++ EV+ +RI + A +
Sbjct: 851 TLCSFPGFPG--LTLPYFSRQLIAREVDLERIRR-------------------AAPKGGS 889
Query: 827 TESAKTNNAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKS 886
++A T +AA A SK + L TL + S + PK
Sbjct: 890 ADNATTKSAAAGATGTPGSK----QKAVAARLPNHLQTLKPKQISDVNAPPKQ------- 938
Query: 887 FRSSSSFFDRFRKLSGKVSQDNDNAVQKATVERDSL---PLLFKFNEGFTNAVKRPVRMR 943
+ + FF G+V+ A V+ D++ P+ +++ EGF NAV++ V +
Sbjct: 939 -QLTKDFF-------GRVTHKTTAAAAAEEVKTDAIVKSPIWYRYKEGFNNAVRKDVHLN 990
Query: 944 DFL 946
+ L
Sbjct: 991 ELL 993
>gi|297745145|emb|CBI38984.3| unnamed protein product [Vitis vinifera]
Length = 236
Score = 340 bits (871), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 169/232 (72%), Positives = 187/232 (80%), Gaps = 27/232 (11%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSR 371
++LLLCGPPGLGKTTLAHVAAKHCGY VVE+NASDDRSSSTIE KILDVVQMNSVMADS+
Sbjct: 26 QILLLCGPPGLGKTTLAHVAAKHCGYRVVEINASDDRSSSTIEAKILDVVQMNSVMADSK 85
Query: 372 PKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASL 431
P CLVIDEIDGALGDGKGAVEVILKMVS ERK++ K NVAK
Sbjct: 86 PNCLVIDEIDGALGDGKGAVEVILKMVSTERKADNKKGNVAK------------------ 127
Query: 432 LRPVICICNDLYAPALRSLRQIA------KVHVFIQPSVSRVVSRLKHICNNESMKTSSI 485
VICICNDLYAPALR +RQ+A KVH+F+QP+VSRVVSRLK+ICN E +KT+S
Sbjct: 128 ---VICICNDLYAPALRPMRQVANDCYHYKVHIFVQPTVSRVVSRLKYICNMEGLKTNST 184
Query: 486 ALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
AL LAEYTECDIRSCLNTLQFL+KK + LNV +I SQVVG+KDMSRS FDI
Sbjct: 185 ALAVLAEYTECDIRSCLNTLQFLNKKNQTLNVFEISSQVVGQKDMSRSIFDI 236
>gi|198474425|ref|XP_001356680.2| GA17299 [Drosophila pseudoobscura pseudoobscura]
gi|198138387|gb|EAL33745.2| GA17299 [Drosophila pseudoobscura pseudoobscura]
Length = 1002
Score = 339 bits (870), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 257/846 (30%), Positives = 394/846 (46%), Gaps = 117/846 (13%)
Query: 128 DRVYVKISSSGVEERVKKLDVRAHSNSLTSEPIDVLLQKVEQEAFNKALNS-SSEGQSDR 186
+R+YV+ S E+R +LD+ + ++ + +KV QEA L + + Q
Sbjct: 247 ERIYVRFHSEEYEKR--QLDLISARGAVVGSLLGEAKEKVWQEANELVLRRLAPDTQPAI 304
Query: 187 SLPEKPVVHE--QLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEV 244
+ P V E +LWVDKY P + +LLSDE TNR +L WLK WD VFG S E+
Sbjct: 305 AAPSTAVTAETGRLWVDKYKPRKYIDLLSDEMTNRSLLYWLKMWDKVVFGKPFHSKQEQE 364
Query: 245 LSALRRHSTISQNKKQND--SSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKK 302
+ N +SF ++ G SNG +R + N+N +
Sbjct: 365 AVTGGGPAGGGGGGGANTQLNSFNKRT-GKFESNGGWRQRKARQALNTNVDAM------- 416
Query: 303 TRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQ 362
G P QKV LLCGPPGLGKTTLAH A+H GY+V E+NASDDRS + + + Q
Sbjct: 417 ----GRPMQKVALLCGPPGLGKTTLAHTIARHAGYNVREINASDDRSPEAFKLALENGTQ 472
Query: 363 MNSVM-ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKIS 421
M+SV+ AD RP C+V+DEIDGA + ++E ++K V+ + S +
Sbjct: 473 MSSVLNADKRPNCIVLDEIDGA---PRQSIEYLVKFVNDDVHSK---------------A 514
Query: 422 KKKGCKKAS--LLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNES 479
K KG K L RP+ICICND+Y PALR LRQIA V F +R+ RL I E
Sbjct: 515 KAKGAKSEHNVLRRPIICICNDIYDPALRPLRQIAFVVTFPPIDAARLAERLGKIAQKEQ 574
Query: 480 MKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWK 539
+KT +L TLAE + D+RSC++++QF + +K+ L + D+ + +G+KD +S F +W
Sbjct: 575 LKTDFGSLITLAEKSGNDVRSCISSMQFFNAQKQSLTLQDVLNNNLGQKDRHQSLFTVWD 634
Query: 540 EIFQ-KRKTKRLR---------------NSVSSSSNVSNEFDFLHSLISNRGDYDVIFDG 583
IF+ +R K+L+ ++S ++ V N D +HS GDY+ + G
Sbjct: 635 SIFRIQRPKKQLQTDTNGTGDEPALVTMTNMSVATRVRNVMDVVHS----SGDYERLTQG 690
Query: 584 IHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQ 643
++EN LQ + DP + L+ +D++ Q I R Q +Y Y P + H L +
Sbjct: 691 VYENYLQQKMPDPNFTGVCEALNWFCFTDILQQQIGRQQNYSIYPYLPYGFVVWHLLFAT 750
Query: 644 IQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSP 703
+ P + +P + + +IF++ + P L+ D++ L ILS
Sbjct: 751 LAWPKISFPTRGFEFTQKSTTQRNIFQTLRKGVTPSAVGVGHGRILLLDTVPMLKRILS- 809
Query: 704 PTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDP 763
P LR V + LLS KE DL + M+ +T+ KS H V +P
Sbjct: 810 PQLRSVTVKLLSPKELQDLNHTIEVMLDLGVTFVQVKSLE---------GHYV--FQPEP 858
Query: 764 PINEFITFKGYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEE 823
++ I F G+ ++ +Q+L EV RI + A +E
Sbjct: 859 DLDALIAFPGFPG--LTVSYFGRQLLAREVALARIRRA------------------APKE 898
Query: 824 DSKTESAKTNNAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDT 883
+ A + A A ++ LP Q T KP S+ +
Sbjct: 899 GEPSAVAAASAAKKQAAKTASTRHLPNHLQ------------------TLKPKPISASNV 940
Query: 884 KKSFRSSSSFFDRFRKLSGKVSQDNDNAVQKATVERDSL---PLLFKFNEGFTNAVKRPV 940
+ S D F G+++ A Q + D++ P+ +++ EGF NAV++ V
Sbjct: 941 RSSAPKQQLTKDFF----GRITHKTSTAKQIDEAKTDAIVKSPIWYRYKEGFNNAVRKDV 996
Query: 941 RMRDFL 946
+ + L
Sbjct: 997 HLHELL 1002
>gi|195052158|ref|XP_001993245.1| GH13174 [Drosophila grimshawi]
gi|193900304|gb|EDV99170.1| GH13174 [Drosophila grimshawi]
Length = 990
Score = 338 bits (868), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 258/846 (30%), Positives = 392/846 (46%), Gaps = 130/846 (15%)
Query: 128 DRVYVKISSSGVEER-VKKLDVRAHS-NSLTSEPIDVLLQKVEQEAFNKALNSSSEGQSD 185
+R+YV+ S E R ++ L VR + SL E + Q + + L S+++
Sbjct: 248 ERLYVRYHSEDYERRQLELLSVRGNQVGSLLGEAKQQVWQDANELVLRR-LTSATQPVCA 306
Query: 186 RSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVL 245
P P + +LWVDKY P + +LLSDE TNR +L WLK WD VFG +S E+
Sbjct: 307 APAPPSPDMG-RLWVDKYKPRKYIDLLSDEMTNRSLLYWLKMWDKVVFGKTFQSKQEQ-- 363
Query: 246 SALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRS 305
+ + Q +SF ++ G SNG +R + N+N +
Sbjct: 364 ----KGANTGGAGGQQLNSFNKRT-GKFESNGGWRQRKQRQALNTNVDEL---------- 408
Query: 306 TGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNS 365
G P QKV LLCGPPGLGKTTLAH A+H GY+V E+NASDDRS + + + QM+S
Sbjct: 409 -GRPMQKVALLCGPPGLGKTTLAHTIARHAGYNVREINASDDRSPEAFKLALENGTQMSS 467
Query: 366 VM-ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKK 424
V+ D RP C+V+DEIDGA + ++E ++K VS S K K
Sbjct: 468 VLNQDKRPNCIVLDEIDGA---PRQSIEYLVKFVSDGIYSKV---------------KSK 509
Query: 425 GCKKAS--LLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKT 482
G K L RP+ICICND+Y PALRSLRQIA V F +R+ RL I + E +KT
Sbjct: 510 GAKAEHNVLRRPIICICNDIYDPALRSLRQIAFVVSFPPIDAARLAERLLQISHKEHLKT 569
Query: 483 SSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIF 542
+L LAE + D+RSC++++QF +K+ L + D+ + +G+KD + FD+W +F
Sbjct: 570 DFGSLIALAEKSGNDVRSCISSMQFFSAQKQSLTLQDVLNNNLGQKDRHQGLFDVWGAVF 629
Query: 543 QKRKTKRLRNSVSS----------------SSNVSNEFDFLHSLISNRGDYDVIFDGIHE 586
+ ++ KR ++S + V N D +HS GDY+ + G++E
Sbjct: 630 RIKRPKRQLQQINSNNSEEPAQVTMTNMSVGTRVRNVLDVVHS----SGDYERLTQGVYE 685
Query: 587 NILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQK 646
N LQ + DP + + SD++ I R Q +Y Y + H L + +
Sbjct: 686 NYLQQKMPDPNFTGICEAMQWFCFSDMVQHQIGRQQNYSIYPYLQYGFVVWHLLFATLAW 745
Query: 647 PNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTL 706
P + +P + +++IF+S + L+ D++ PLL + P L
Sbjct: 746 PKIAFPTRGFEFNQKCTNQLNIFQSLRKGVTTSAQGVGQGTILLLDTV-PLLKRILSPQL 804
Query: 707 RPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPIN 766
R VA+ LLS KE+ DL + MV LT+ KS H V +P ++
Sbjct: 805 RSVAIQLLSQKEQYDLRHTIQVMVDLGLTFVQVKSAE---------GHYV--FQTEPDLD 853
Query: 767 EFITFKGYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSK 826
F G+ L +Q++ EV+ +RI + K
Sbjct: 854 TLCAFPGFAG--LTLPYFSRQLIAREVDLERIRRAA----------------------PK 889
Query: 827 TESAKTNNAA--VSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTK 884
++ K+ A+ VSAK E ++ LP Q ++KPK D
Sbjct: 890 GDATKSTIASVTVSAKKPEAAR-LPNHLQ--------------------TLKPKQVTD-- 926
Query: 885 KSFRSSSSFFDRFRK-LSGKVSQDNDNAVQKATVERDSL---PLLFKFNEGFTNAVKRPV 940
F S S + K G+V+ A V+ D++ P+ +++ EGF NAV++ V
Sbjct: 927 --FSSRSGPKQQLTKDFFGRVTHKTTAATAMDEVKTDAIVKSPIWYRYKEGFNNAVRKDV 984
Query: 941 RMRDFL 946
+ + L
Sbjct: 985 HLNELL 990
>gi|297741990|emb|CBI33777.3| unnamed protein product [Vitis vinifera]
Length = 235
Score = 338 bits (866), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 170/228 (74%), Positives = 185/228 (81%), Gaps = 23/228 (10%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSR 371
++LLLCGPPGLGKTTLAHVAAKHCGY VVE+NASDDRSSSTIE KILDVVQMNSVMADS+
Sbjct: 29 QILLLCGPPGLGKTTLAHVAAKHCGYRVVEINASDDRSSSTIEAKILDVVQMNSVMADSK 88
Query: 372 PKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASL 431
P CLVIDEIDGALGDGKGAVEVILKMVS ER KG K ASL
Sbjct: 89 PNCLVIDEIDGALGDGKGAVEVILKMVSIER---------------------KGHKTASL 127
Query: 432 LRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLA 491
RPVICICNDLYAPALR LRQ+AKVH+F+QP+VSRVVSRLK+ICN E +KT+S AL L
Sbjct: 128 SRPVICICNDLYAPALRPLRQVAKVHIFVQPTVSRVVSRLKYICNMEGLKTNSTALAALT 187
Query: 492 EYTE--CDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
EYT CDIRSCLNTLQFL+KK + LNV +I SQVVG+KDMSRS FDI
Sbjct: 188 EYTGEMCDIRSCLNTLQFLNKKNQTLNVFEISSQVVGQKDMSRSIFDI 235
>gi|167860135|ref|NP_001103572.2| CTF18, chromosome transmission fidelity factor 18 homolog [Danio
rerio]
Length = 957
Score = 332 bits (850), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 277/872 (31%), Positives = 420/872 (48%), Gaps = 133/872 (15%)
Query: 116 GDCLPVTAPSGGDRVYVKISSSGVEERVKKLDVRAHSNSLT-----SEPIDVLLQKVEQE 170
GD + VT S G+RVY+ + E+ K D RA NSL + PI+VL +++ +
Sbjct: 178 GDYITVTD-SMGNRVYL----NKKEDVEKTPDPRAFRNSLNGLGLLAVPIEVLKEQIAER 232
Query: 171 AFNKALNSS----------------SEGQSDRSLPEKPVVHE---QLWVDKYAPNSFTEL 211
+ + S +E Q+D + E +LWVD+++P +T+L
Sbjct: 233 RHRQVVEESQRLTELMKSGIDSDLLAEEQTDSGVDGDSGEDEASSRLWVDQFSPQHYTDL 292
Query: 212 LSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRG 271
LSD+ TNR +L WLK WD+ VFG E +S V + S+FT
Sbjct: 293 LSDDFTNRCLLKWLKLWDTVVFGRERKSRPVPV---------------EARSNFT----- 332
Query: 272 NRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVA 331
N +N N + + S+ ++ + P+ KV LL GPPGLGKTTLAH+
Sbjct: 333 ------NAQNQNQAQRFKTKSQMTEEILEAELDQYKRPKFKVALLSGPPGLGKTTLAHII 386
Query: 332 AKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM-ADSRPKCLVIDEIDGALGDGKGA 390
AKH GY+VVE+NASDDRS+ + +I QM SV+ A+ +P CL+IDEIDGA A
Sbjct: 387 AKHAGYNVVEINASDDRSAELFQKRIDTATQMKSVLGANEKPNCLIIDEIDGAPA---AA 443
Query: 391 VEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSL 450
+ ++L ++ K++ E+ KKK K++ LLRP+ICICNDLY PALR L
Sbjct: 444 INILLATLNR-------KDSKDGEETGVNALKKKKKKQSVLLRPIICICNDLYVPALRPL 496
Query: 451 RQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFL-D 509
RQ A + VF Q SR+ RL I + MK + L L E T+ DIRSC+NTLQFL
Sbjct: 497 RQQAFLLVFPQTLPSRLAQRLAEISRRQGMKADTGTLMALCEKTDNDIRSCINTLQFLHS 556
Query: 510 KKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNV--------S 561
+ ++ L+ + S VG KD ++ F +W+EIFQ + KR R S +
Sbjct: 557 RGQKHLDQRSVSSMCVGLKDQNKGLFSVWQEIFQLPRLKRKRIGGDPFSGYDELGPKEGA 616
Query: 562 NEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRT 621
+ L+S+ G+++ + G+++N L ++ DP ML LD L SDL+++ ++
Sbjct: 617 QRLQHILHLVSSTGEHEKLTQGLYDNFLSMKLKDPGMLGVCSGLDWLCFSDLLNECVLHG 676
Query: 622 QQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSY-------QRYRNAFMEKMDIFKSWHS 674
Q L Y P L H+L + P + +P S+ Q RNA + ++
Sbjct: 677 QNYSLMRYFPFLPAAFHQLYAATSVPRINYPHSHYEAFTKTQHIRNALLAMLN------- 729
Query: 675 KIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSL 734
IPP I + SL D +S LL L P LRPV L S +EK L L+ M++Y+L
Sbjct: 730 DIPPAIQSRVCMSSLCLDILS-LLLELISPKLRPVNPQLYSTREKQQLYDLIDTMINYNL 788
Query: 735 TYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLALAVKQVLVHEVE 794
TY+ ++ T +P I + + + G L VKQ++ E E
Sbjct: 789 TYRQDRT-----------PEGQYTYVLEPNIEDVVNYPGLPPRRQ-LTYQVKQLIARETE 836
Query: 795 KQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTNNAAVSAKLIEKSKSLPYSRQC 854
+R+ +V +++ + K +E+ KTE K + +L
Sbjct: 837 LERMRRVE--RAQQSRNPQKMETVNKNQEEKKTEVKKQTSRNHQQRL------------E 882
Query: 855 NPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDRFRKLSGKVSQDNDNAVQK 914
N TV+ T ++ PK +K +++S K+SG ++ + K
Sbjct: 883 NIVKQTVVETRPELDFFGRAIVPK-----EKPVVTATS---EDGKVSGVLN------IGK 928
Query: 915 ATVERDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
A D + F+FNEG +NAV+R V +R+ L
Sbjct: 929 AVGNSD---VWFRFNEGVSNAVRRNVYIRELL 957
>gi|297745144|emb|CBI38983.3| unnamed protein product [Vitis vinifera]
Length = 227
Score = 331 bits (848), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 155/225 (68%), Positives = 185/225 (82%)
Query: 548 KRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDC 607
KR + S + S +SN FDFL+ LISNRGDYD+I DGIHENI QL YHDP+M KTVKCL+
Sbjct: 2 KRAKRSDNCCSGMSNGFDFLYPLISNRGDYDLILDGIHENIFQLHYHDPIMQKTVKCLNT 61
Query: 608 LGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMD 667
LG SDL+HQY+MRTQQM L VYQP AI++HRL++Q+QKP +EWPKS+ RYR FMEK D
Sbjct: 62 LGISDLVHQYVMRTQQMSLNVYQPLTAISLHRLIAQVQKPIIEWPKSFMRYRTTFMEKRD 121
Query: 668 IFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVS 727
I +SWH+KI PYISRHLS +S VED +SPLLHILSPPTLRPVALHLLS +E+NDLAQL++
Sbjct: 122 ILRSWHNKIAPYISRHLSIKSFVEDLVSPLLHILSPPTLRPVALHLLSERERNDLAQLIN 181
Query: 728 AMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFK 772
AMVSYS+TYKN KSDPL +E + D +LSFDPPI +F+TFK
Sbjct: 182 AMVSYSITYKNMKSDPLHGTQLHEAASDGLSLSFDPPIADFVTFK 226
>gi|195387666|ref|XP_002052515.1| GJ17580 [Drosophila virilis]
gi|194148972|gb|EDW64670.1| GJ17580 [Drosophila virilis]
Length = 994
Score = 330 bits (847), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 253/845 (29%), Positives = 388/845 (45%), Gaps = 127/845 (15%)
Query: 128 DRVYVKISSSGVEERVKKLDVRAHSNSLTSEPIDVLLQKVEQEAFN---KALNSSSEGQS 184
+R+YV+ S E R +L++ + L + Q+V QEA + L +++ +
Sbjct: 251 ERLYVRFHSEDYERR--QLELLSARGDLIGSLLGEAKQQVWQEANELVLRRLAPATQPVN 308
Query: 185 DRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEV 244
+ P P + +LWVDKY P + +LLSDE TNR +L WLK WD VFG S E+
Sbjct: 309 AAADPSSPDMG-RLWVDKYKPRKYIDLLSDEMTNRSLLYWLKMWDKVVFGKVFHSKQEQ- 366
Query: 245 LSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTR 304
+ + + Q +SF ++ G SNG +R + N+N +
Sbjct: 367 -----QAANTGASGAQQLNSFNKRT-GKFESNGGWRQRKARQALNTNVDEL--------- 411
Query: 305 STGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMN 364
G P QKV LLCGPPGLGKTTLAH A+H GY+V E+NASDDRS + + + QM+
Sbjct: 412 --GRPMQKVALLCGPPGLGKTTLAHTIARHAGYNVREINASDDRSPEAFKLALENGTQMS 469
Query: 365 SVM-ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKK 423
SV+ D RP C+V+DEIDGA + ++E ++K VS S K
Sbjct: 470 SVLNQDKRPNCIVLDEIDGA---PRQSIEYLVKFVSDGIFSKV---------------KA 511
Query: 424 KGCKKAS--LLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMK 481
KG K L RP+ICICND+Y PALR LRQIA V F +R+ RL I E +K
Sbjct: 512 KGAKAEHNVLRRPIICICNDIYDPALRPLRQIAFVVNFPPIDSARLAERLVQIAKKEHLK 571
Query: 482 TSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEI 541
T +L LAE + D+RSC++++QF + +K L + D+ + +G+KD + FD+W +
Sbjct: 572 TDFGSLIALAEKSGNDVRSCISSMQFFNVQKHSLTLQDVLNNNLGQKDRHQGLFDVWGAV 631
Query: 542 FQ-KRKTKRLRNS---------------VSSSSNVSNEFDFLHSLISNRGDYDVIFDGIH 585
F+ +R K+L+ S +S ++ V N D +HS GDY+ + G++
Sbjct: 632 FRIQRPKKQLQQSSSNNPEEPVQVTMTNMSVATRVRNVLDVVHS----SGDYERLTQGVY 687
Query: 586 ENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQ 645
EN LQ + DP + L SD + I R Q +Y Y + H L + +
Sbjct: 688 ENYLQQKMPDPNFTGICEALQWFCFSDTLQHQISRQQSYSIYPYLQYGFVVWHLLFATLA 747
Query: 646 KPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPT 705
P + +P + + + +IF S + +L+ D++ PLL + P
Sbjct: 748 WPKIAFPTRGFEFNQKYTNQRNIFLSLRKGVTTSAQGVGQGNTLLLDTV-PLLKRILSPQ 806
Query: 706 LRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPI 765
LR VA+ LLS KE+ DL + MV LT+ KS + +P +
Sbjct: 807 LRSVAVQLLSQKEQYDLRHTIQVMVDLGLTFVQVKS-----------AEGHYVFQTEPDL 855
Query: 766 NEFITFKGYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDS 825
+ F GY L +Q++ EV+ +RI + K + A + +
Sbjct: 856 DTLCAFPGYTG--LTLPYFSRQLIAREVDLERIRRAAP----------KGDQAAATKSSA 903
Query: 826 KTESAKTNNAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKK 885
A T V+A+L ++L KPK D
Sbjct: 904 AAPVAVTKQKPVAARLPNHLQTL---------------------------KPKQITDFNA 936
Query: 886 SFRS-SSSFFDRFRKLSGKVSQDNDNAVQKATVERDSL---PLLFKFNEGFTNAVKRPVR 941
+ + FF G+V+ A V+ D++ P+ +++ EGF NAV++ V
Sbjct: 937 PKQQLTKDFF-------GRVTHKTSAASAAEEVKTDAIVKSPIWYRYKEGFNNAVRKDVH 989
Query: 942 MRDFL 946
+ + L
Sbjct: 990 LNELL 994
>gi|298708269|emb|CBJ48332.1| similar to CTF18, chromosome transmission fidelity factor 18
homolog isoform 3 [Ectocarpus siliculosus]
Length = 1130
Score = 328 bits (842), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 205/631 (32%), Positives = 321/631 (50%), Gaps = 75/631 (11%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LWVDKYAP+ F +LLSDE+ NREVL +K WD VF E R T++
Sbjct: 325 LWVDKYAPDGFRDLLSDEKINREVLRAVKAWDPFVFKKETA-----------RTGTVTAE 373
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
KK + ++ + S G D+ K+ PE ++++LC
Sbjct: 374 KK--------------------KGVGGMKPLSMASTG--DATDKR------PEARIIMLC 405
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVI 377
GPPGLGKTTLA V AKH GY V E+NASDDR++S + ++ + ++ N+++AD RP +V+
Sbjct: 406 GPPGLGKTTLAQVVAKHAGYRVYEINASDDRTASVLRQRMTEAMEGNTLLADKRPNLIVL 465
Query: 378 DEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVIC 437
DE+DGA DGK A +V++ + +A TA KKG ++ SL RP++
Sbjct: 466 DEVDGA--DGKAAAQVLVDIATAPLAKATAATG----------GGKKGKRRTSLTRPLVL 513
Query: 438 ICNDLYAPALRSLRQIAKVHVF-IQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTEC 496
ICND + PALR +R IA+V VF + S +R+V RLK IC +E + ++ ALT LA+ +
Sbjct: 514 ICNDQWTPALRPIRAIAQVFVFRAKSSPARLVQRLKAICTSERLTVNTDALTRLADRSHL 573
Query: 497 DIRSCLNTLQFLDKKKEILNVMDIGSQVV-----GRKDMSRSAFDIWKEIFQKRKT---K 548
D+RSCL+TLQF+ ++ +V + + ++ G KD R F++ + +F ++K+ +
Sbjct: 574 DVRSCLHTLQFVARRASSGSVTNASAALLTAVAEGIKDERRDLFEVLRSVFTRKKSGTKR 633
Query: 549 RLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCL 608
RL S + + + D+ + G+HEN L ++++DP + K +D L
Sbjct: 634 RLFLGGEQGSMADRKDAEVFEEVQAFNDHSKVLAGVHENFLGVRFNDPTLSKAAAAMDWL 693
Query: 609 GNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDI 668
+DLM +TQ Y P A VH L Q+ + PK R A K +I
Sbjct: 694 EMADLMDTRTNQTQDYSFSRYAPVAAAGVHFLCRSDQRSTVTQPKKDYEARTARAAKSNI 753
Query: 669 FKSWHSKIPPYISRHL-----STESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLA 723
S+ R L +T++LV D +S L+ IL+ PTLRP+ LLS +E+
Sbjct: 754 LHSFAD------GRQLGATGRTTQALVLDMLSHLMDILA-PTLRPLNPDLLSPQERARFR 806
Query: 724 QLVSAMVSYSLTYKNTKSDPLLNNLGNE---VSHDVSTLSFDPPINEFITFKGYRSNHYV 780
LV ++S LT+ + + + + +P I++ + ++GY H
Sbjct: 807 DLVGILLSCGLTFSPQSASSSSSASAPPAFGAAARAQEFALEPAIDQLLKYEGYEFAHPR 866
Query: 781 LALAVKQVLVHEVEKQRIMQVTIGKSEHLAD 811
LA ++ ++ HEV + + Q K H D
Sbjct: 867 LAPPLRPMVAHEVALEGMRQAEAAKLSHRED 897
Score = 43.5 bits (101), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 7/46 (15%)
Query: 908 NDNAVQKATVE-------RDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
++ ++ TVE + +P+ ++F G+TNAV+RPVRMRD L
Sbjct: 1085 HEGVARRGTVEDEGVGSGKGKIPIRYQFRAGYTNAVRRPVRMRDLL 1130
>gi|159467843|ref|XP_001692101.1| DNA damage repair and chromosome cohesion protein [Chlamydomonas
reinhardtii]
gi|158278828|gb|EDP04591.1| DNA damage repair and chromosome cohesion protein [Chlamydomonas
reinhardtii]
Length = 1490
Score = 326 bits (835), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 195/604 (32%), Positives = 288/604 (47%), Gaps = 114/604 (18%)
Query: 197 QLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQ 256
QLWVDKYAP F LLSDE+TNR+V LW+K WD CVFG R +
Sbjct: 614 QLWVDKYAPRHFMSLLSDERTNRQVALWMKDWDECVFG---------------RKAGAGA 658
Query: 257 NKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLL 316
NK + + G + + R P+ KVLL+
Sbjct: 659 NKARGGA-----GTGPLGAKADTR----------------------------PQNKVLLI 685
Query: 317 CGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLV 376
GPPGLGKTTLAHV A+HCGYH E+NASDDR+++T+ KI D VQM +V+ RP C++
Sbjct: 686 GGPPGLGKTTLAHVVARHCGYHPYEINASDDRTAATLATKIQDAVQMTAVLGGGRPNCVI 745
Query: 377 IDEIDGALG--DGKGAVEVILKMVSAERKS------NTAKENVAKEDQPEKISKKK---- 424
+DEIDGA G + AV ++K++ A + K A D + S +
Sbjct: 746 VDEIDGATGGTEANSAVAALMKIIKAGDAAPGGSGRGAGKAAHAGSDGEDSDSDNEGGAG 805
Query: 425 ---------------------GCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPS 463
L RP+ICI NDLYAP LR LR +A+V F PS
Sbjct: 806 GNKRGGAGGAAGAKRRGGKSGAASSRPLSRPIICIANDLYAPQLRPLRDVARVFTFTPPS 865
Query: 464 VSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEI--------- 514
R+ +RL+ IC E M+ ALT L E TE D+R+CLNTLQFL ++K+
Sbjct: 866 SERLAARLQQICRAEGMEADPAALTLLVERTERDVRACLNTLQFLARRKQAGAGGGCRRR 925
Query: 515 LNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTK-----------------RLRNSVSSS 557
+ DI + KD ++SA D+W + K + +
Sbjct: 926 IETKDIEGLNIASKDTTQSARDMWTALLTASNNKAAARRRAAGGGGSRAAAGVNGGAGAG 985
Query: 558 SNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQY 617
S E L + + + GDYD++ +G+HEN+ ++++ D + +T + + +G +D++ +
Sbjct: 986 GVGSGELGELCNKLQDFGDYDLVLNGLHENVPRVRFMDINLSRTAQAAEAMGQADILLRS 1045
Query: 618 IMRTQQMPLYVYQPPLAITVHRLVSQIQKP-NLEWPKSYQRYRNAFMEKMDIFKSW---H 673
RT + PP TV LV+Q ++P L WP+ + +SW
Sbjct: 1046 CRRTGDFSALRFVPPCLATVRSLVAQPEQPRQLSWPRLGADVARRASAVTQLVRSWVGGG 1105
Query: 674 SKIPPYISRHLSTESLVEDSISPLLH-ILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSY 732
P +S H + ++E ++P L I+S P LR VA ++++A+E+ L ++ M+ Y
Sbjct: 1106 GSDPAVLSAHGARVMILE--LAPALRTIVSQPPLRAVAPNMMNAEEQATLRRMAGVMLHY 1163
Query: 733 SLTY 736
L Y
Sbjct: 1164 GLRY 1167
>gi|387015160|gb|AFJ49699.1| Chromosome transmission fidelity protein 18-like protein [Crotalus
adamanteus]
Length = 998
Score = 326 bits (835), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 264/824 (32%), Positives = 385/824 (46%), Gaps = 130/824 (15%)
Query: 160 IDVLLQKVEQEAFNKA--LNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQT 217
++VL + +E +KA LN E SDRS E H LWVD++ P + ELLSD+ T
Sbjct: 268 MEVLSRLGAEETQDKAPGLNGEEES-SDRSEAEASAQHS-LWVDQFTPRRYMELLSDDYT 325
Query: 218 NREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNG 277
NR +L WLK WD VFG E + S + H ++ Q G RW
Sbjct: 326 NRCLLKWLKLWDVLVFGKEKPYRKMPLPSGI--HPPFKPSRDQ----------GTRWKTK 373
Query: 278 NFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGY 337
LE E H + P+ K+ LLCGPPGLGKTTLAHV AKH GY
Sbjct: 374 AQMTEEVLEAELDQ--------HNR------PKFKIALLCGPPGLGKTTLAHVIAKHAGY 419
Query: 338 HVVEVNASDDRSSSTIENKILDVVQMNSVM-ADSRPKCLVIDEIDGALGDGKGAVEVILK 396
+VVE+NASDDR+ + +I QM SV+ A+ +P CLVIDEIDGA ++ V+L
Sbjct: 420 NVVEMNASDDRNPDVFQIQIEAATQMKSVLGANEKPNCLVIDEIDGA---PVASINVLLS 476
Query: 397 MVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKV 456
+ +N V ED+P I K + LLRP+ICICND Y PALR L+Q A +
Sbjct: 477 I------TNQKAGMVQSEDRP--IGAKSRGRGRLLLRPIICICNDQYVPALRLLKQQAFI 528
Query: 457 HVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFL-DKKKEIL 515
F SR+V RL I + MK ALT L E T+ DIRSC+NTLQFL + K+ L
Sbjct: 529 LNFPSTLQSRLVQRLHEIAILQGMKADIGALTALCEKTDNDIRSCINTLQFLYSRGKKKL 588
Query: 516 NVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKR--------LRNSV------------- 554
NV + + VG KD ++ F IW+EIFQ + +R L S+
Sbjct: 589 NVRTVQAATVGLKDRNKGLFSIWQEIFQLPRARRKNLGTNPSLPASLLSGADDEFGRGEG 648
Query: 555 -SSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDL 613
+S S+ + +F + L + G+++ + G+++N L ++ D + L+ LG SDL
Sbjct: 649 QTSISSSTQQFHHILHLSVSSGEHEKLSQGLYDNFLHMKVKDSSLDSVCLALEWLGFSDL 708
Query: 614 MHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWH 673
+ + I+ +Q L Y P L ++ H L + P L +P S Q + + + S
Sbjct: 709 LGKAILYSQSFQLMRYLPFLPVSFHLLFAASSIPRLIYPHSQQEALSKLTQMHHLVDSMI 768
Query: 674 SKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYS 733
S I P + +S + + LL I+SP LRPV L + EK L+QL++ M++Y+
Sbjct: 769 SGIAPNSRSRVRPQSFTLEVLCLLLEIISP-KLRPVNTQLYNQNEKEQLSQLINIMLTYN 827
Query: 734 LTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKG--YRSNHYVLALAVKQVLVH 791
LTY ++ DP + E F +R L KQ++
Sbjct: 828 LTYHQEQT-----------PEGQYIYKLDPNVEEVCRFPDLPFRKP---LTYQAKQLIAR 873
Query: 792 EV--EKQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTNNAAVSAKLIEKSKSLP 849
E+ EK R M+ + E +++ +TN+ A + + KS+
Sbjct: 874 EIQLEKMRQMEAPLQALE-----------------ARSLPTETNHEAGTGGELRKSRIRN 916
Query: 850 YSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDRFRKLSGKVSQDND 909
+ + N + +T KP+ FF + V
Sbjct: 917 HEQSLNQIV----------KRATVEEKPERD------------FFGQVILKKKAVPSPEI 954
Query: 910 NAV-QKATVERD------SLPLLFKFNEGFTNAVKRPVRMRDFL 946
N V +K TVE+ + F+FNEG +NAV+R + ++DFL
Sbjct: 955 NQVPEKNTVEKQIGKAVGQSDVWFQFNEGVSNAVRRNIYIKDFL 998
>gi|432847418|ref|XP_004066014.1| PREDICTED: LOW QUALITY PROTEIN: chromosome transmission fidelity
protein 18 homolog [Oryzias latipes]
Length = 922
Score = 323 bits (828), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 269/877 (30%), Positives = 402/877 (45%), Gaps = 144/877 (16%)
Query: 114 IDGDCLPVTAPSGGDRVYV-KISSSGVEERVKKLDVRAHSNS-----LTSEPIDVL---- 163
++GD + VT S G RVY+ K +G ++ V D R +NS L + PI L
Sbjct: 146 LEGDYISVT-DSSGTRVYLRKKEDTGAQQAV---DSRLITNSSGGLGLLAVPIAALREQE 201
Query: 164 -----LQKVEQ-----EAFNK----ALNSSSEGQSDRSLPEKPVVHE----QLWVDKYAP 205
LQ VE+ E N+ A S ++D + E P E +LWVD+++P
Sbjct: 202 AERRHLQVVEESQRLTELLNRTVTDAFTESESAENDEN--EDPENGEGKASRLWVDRFSP 259
Query: 206 NSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSF 265
+TELLSD+ TNR +L WLK WD+ VFG E ++ + S + N +SF
Sbjct: 260 GHYTELLSDDFTNRCLLKWLKLWDTVVFGRERKT-----------RTARSDRQTANQNSF 308
Query: 266 TRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKT 325
+ N+GN+ N R + +E D + + P+ KV LL GPPGLGKT
Sbjct: 309 -KPNQGNQTQN---RFKSKIEMTEEILDAELDQYRR-------PKFKVALLSGPPGLGKT 357
Query: 326 TLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM-ADSRPKCLVIDEIDGAL 384
TLAHV AKH GY+VVE+NASDDRS+ + +I QM SV+ A+ RP CL+IDEIDGA
Sbjct: 358 TLAHVIAKHAGYNVVEINASDDRSAEVFQKRIDTATQMKSVLGANERPNCLIIDEIDGAP 417
Query: 385 GDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYA 444
A+ ++L ++S RK E KKK ++ LLRP+ICICNDLY
Sbjct: 418 A---AAINILLALLS--RKDGHGAETATD------AMKKKKKREQILLRPIICICNDLYT 466
Query: 445 PALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNT 504
PALR LRQ A + F Q SR+ RL I + + +K + AL L E T+ DIRSC+NT
Sbjct: 467 PALRPLRQQAFLLTFPQTQPSRLAQRLSEISSRQGLKADTGALLCLCEKTDNDIRSCINT 526
Query: 505 LQFLDKKKEILNVMDIGSQVVGRKDMSR---------------SAFDIWKEIFQKRKTKR 549
LQ + V G V GR S+ + F + + +KR +
Sbjct: 527 LQ--------VCVCVCGEHVNGRVGSSKIVQGLRDXISNFXTLAVFLKFFFVLRKRIGEA 578
Query: 550 LRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLG 609
V S + + F + L S+ G+Y+ + G++EN L ++ DP + + LD L
Sbjct: 579 F-EEVPGSGSGAQRFQHILHLASSSGEYEKVSQGLYENFLSMRVRDPNLQSVCEALDWLL 637
Query: 610 NSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIF 669
SD ++Q I+R Q L Y P L++T H L + P + +P + + + +
Sbjct: 638 FSDRLNQEILRGQNFSLMKYLPFLSVTFHFLFAHTTVPRISYPHGHHEASSRLLSSRNAL 697
Query: 670 KSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAM 729
+ IP I +S +L D ++ LL I+ P LRPV L S++EK + +L+S M
Sbjct: 698 STMLVDIPAAIRTRISQLTLTLDVLTLLLDIIC-PKLRPVNPQLFSSREKEQMRELISTM 756
Query: 730 VSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLALAVKQVL 789
++Y+L+Y+ ++ T +P + E F G L KQ +
Sbjct: 757 LAYNLSYRQDRT-----------PEGQYTYMLEPRVEEVARFPGLPPRRQ-LTYQAKQTI 804
Query: 790 VHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTNNAAVSAKLIEKSKSLP 849
E+E +++ + + G KE A + + N + + +
Sbjct: 805 SREMELEKMRRAEQLILQRNPAGKKEEKKSAAPAAIRNHQQRLENIVKQTTVESRPEVDF 864
Query: 850 YSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDRFRKLSGKVSQDND 909
+ R P +P+ S DT + G
Sbjct: 865 FGRAVAPKPQ----------------RPQPSSDTGE----------------GCAVLSMG 892
Query: 910 NAVQKATVERDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
AV + V F+FNEG +NAV+R V +R+ L
Sbjct: 893 TAVGNSDV-------WFRFNEGMSNAVRRNVYIRELL 922
>gi|410917802|ref|XP_003972375.1| PREDICTED: chromosome transmission fidelity protein 18 homolog
[Takifugu rubripes]
Length = 921
Score = 323 bits (827), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 238/766 (31%), Positives = 371/766 (48%), Gaps = 107/766 (13%)
Query: 197 QLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQ 256
+LWVD+++P +TELLSD+ TNR +L WLK WD VFG E
Sbjct: 247 RLWVDRFSPRHYTELLSDDFTNRCLLKWLKLWDGVVFGRE-------------------- 286
Query: 257 NKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLL 316
+K + + F R+ G S N N N ++ + + ++ + P+ KV LL
Sbjct: 287 -RKSHPARFDRQAAGQNTSKPNHTNQNPNRFK-TKVEMTEEILEAELDQYKRPKFKVALL 344
Query: 317 CGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-DSRPKCL 375
GPPGLGKTTLAH+ AK GY+VVE+NASDDRS+ + +I QM SV+ + +P CL
Sbjct: 345 SGPPGLGKTTLAHIIAKQAGYNVVEINASDDRSAEVFQKRIDTATQMKSVLGVNEKPNCL 404
Query: 376 VIDEIDGALGDGKGAVEVILKMVS-AERKSNTAKENVAKEDQPEKISKKKGCKKASLLRP 434
+IDEIDGA A+ ++L ++ + S A E + K+ + E I LLRP
Sbjct: 405 IIDEIDGA---PTAAINILLAALNRKDGHSGEATETMKKKKKKESI----------LLRP 451
Query: 435 VICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYT 494
+ICICNDLY PALR LRQ A + F Q SR+ RL I MK + AL +L E T
Sbjct: 452 IICICNDLYVPALRPLRQQAFLLTFPQTQPSRLSQRLTEISLLHGMKADTGALMSLCEKT 511
Query: 495 ECDIRSCLNTLQFL-DKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLR-- 551
+ DIR+C+NTLQFL + + ++V I S VG+KD ++ F +W+EIFQ +TKR R
Sbjct: 512 DNDIRACINTLQFLYGRGLKQVDVRTIQSVSVGQKDQNKGLFHLWQEIFQLPRTKRKRIG 571
Query: 552 ---NSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCL 608
S + S F + L S+ G+Y+ + G+++N L ++ DP + + L+ L
Sbjct: 572 EGFEEAPGSGSGSQRFHHVFHLASSSGEYEKVSQGLYDNYLSMRIRDPNLQSVCEALEWL 631
Query: 609 GNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDI 668
SD ++Q I+ Q L Y P L++T H L + P + +P S + +
Sbjct: 632 SFSDRLNQEILHCQNFSLMRYLPFLSVTFHFLFAHTHVPRITYPHSQHEAFSRLNSSRNA 691
Query: 669 FKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSA 728
+ S IP I R +++ ++ + PLL + P LRPV L S++EK + +LV
Sbjct: 692 LSTMLSDIPACI-RTRTSQQILALDMLPLLLDILCPKLRPVNPQLFSSREKEQMHELVDT 750
Query: 729 MVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLALAVKQV 788
M++Y+L+Y+ ++ T +P + E + + L KQ
Sbjct: 751 MLAYNLSYRQDRT-----------PEGQYTYILEPRVEEVVRYPSLPPRRQ-LTYQAKQT 798
Query: 789 LVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTNNAAVSAKLIEKSKSL 848
+ E+E++++ + A+ + AG K E K + +++ ++ +++
Sbjct: 799 ISREMEQEKMRR---------AEQLILQRNPAGTLIQKQEEKKNRGSKLTSNHQQRLENI 849
Query: 849 PYSRQCNPSTSTVLTTLDSSRSSTASVKPK----SSGDTKKSFRSSSSFFDRFRK----L 900
+ +T +P+ T K R S DR K L
Sbjct: 850 -------------------VKQTTVEARPEVDFFGRAITPKPKREQLS-SDRGEKCPSLL 889
Query: 901 SGKVSQDNDNAVQKATVERDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
GK ++D + F+FNEG +NAV+R V +R+ L
Sbjct: 890 MGKAVGNSD--------------VWFRFNEGMSNAVRRNVYIRELL 921
>gi|195471147|ref|XP_002087867.1| GE14801 [Drosophila yakuba]
gi|194173968|gb|EDW87579.1| GE14801 [Drosophila yakuba]
Length = 993
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 223/692 (32%), Positives = 340/692 (49%), Gaps = 73/692 (10%)
Query: 128 DRVYVKISSSGVEERVKKLDVRAHSNSLTSEPIDVLLQKVEQEAFNKALNSSSEGQ-SDR 186
+R+YV+ S E+R +LD+ + + + +KV QEA L+ ++ + +D
Sbjct: 250 ERIYVRFHSEDYEQR--QLDLISARGEVVGSLLGEAKEKVWQEAGEIVLSRATAAEEADV 307
Query: 187 SLPEKPVVHE--QLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEV 244
+L + E +LWVDKY P + +LLSDE TNR +L WLK WD VFG S E+
Sbjct: 308 TLVDSNSNTEPGRLWVDKYKPRKYIDLLSDEMTNRSLLYWLKMWDKVVFGKAFHSKREQ- 366
Query: 245 LSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTR 304
A+ + +SF ++ G SNG +R + + N+N +
Sbjct: 367 -EAVTAEGGTAGGAGNQLNSFNKRT-GKFESNGGWRQRKSRQALNTNVDAL--------- 415
Query: 305 STGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMN 364
G P QKV LLCGPPGLGKTTLAH A+H GY+V E+NASDDRS + + + QM+
Sbjct: 416 --GRPMQKVALLCGPPGLGKTTLAHTIARHAGYNVREINASDDRSPEAFKLALENGTQMS 473
Query: 365 SVM-ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKK 423
SV+ D RP C+V+DEIDGA + ++E ++K +S S K
Sbjct: 474 SVLNEDKRPNCIVLDEIDGA---PRQSIEYLVKFISDAVYSKV---------------KV 515
Query: 424 KGCKKAS--LLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMK 481
KG K L RP+ICICND+Y PALR LRQ+A V F +R+ RL I + E +K
Sbjct: 516 KGAKAEHNVLKRPIICICNDVYDPALRPLRQVAFVVSFPPIDAARLAERLVKIAHREQLK 575
Query: 482 TSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEI 541
T +L LAE + D+RSC++++QF + +K L + D+ + +G+KD + F +W I
Sbjct: 576 TDFGSLIALAEKSGNDVRSCISSMQFFNAQKHSLTLQDVLNNNLGQKDRHQGLFAVWDAI 635
Query: 542 FQ-KRKTKRLRNSV--------------SSSSNVSNEFDFLHSLISNRGDYDVIFDGIHE 586
F+ +R K L+ V S ++ V N + +HS GDY+ + G++E
Sbjct: 636 FRIQRPRKTLQTDVNKVDEPAQVTMTNTSVTTRVRNVLEVVHS----SGDYERLMQGVYE 691
Query: 587 NILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQK 646
N LQ + DP + L +D + I R Q +Y Y + H L + +
Sbjct: 692 NYLQQKMPDPNFTGVCEALKWFCFTDTVQHQISRQQNYSVYPYMQYGFVVWHLLFATLAW 751
Query: 647 PNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTL 706
P + +P ++ + +IF++ + +L+ D++ PLL + P L
Sbjct: 752 PKIAFPTRGFEFQQKSTNQRNIFQAICKGVTTSALGVGQGGTLLLDTV-PLLKRILSPQL 810
Query: 707 RPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPIN 766
R VA+ LLS KE+ DL + MV LT+ KS + H V +P ++
Sbjct: 811 RSVAVQLLSPKEQQDLRHTIEVMVDLGLTFVQVKS---------QEGHYV--FQTEPDLD 859
Query: 767 EFITFKGYRSNHYVLALAVKQVLVHEVEKQRI 798
F GY L +Q++ EV+ +RI
Sbjct: 860 ALSAFPGYTG--LSLPYFSRQLIAREVDLERI 889
>gi|440796656|gb|ELR17765.1| ATPase, AAA domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 1049
Score = 322 bits (824), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 247/818 (30%), Positives = 371/818 (45%), Gaps = 147/818 (17%)
Query: 114 IDGDCLPVTAPSGGDRVYVKISSSGVEERVKKLDVRAHSNSLTSEPIDVLLQKVEQEAFN 173
+D C+PV + G RVYV + V E L A L S PI VLL++V Q F
Sbjct: 151 LDTPCIPVNS-YDGRRVYVALHEEEVSEVTDPL---AEREQLLSTPISVLLERVHQLEFV 206
Query: 174 KALNSSS--EGQSDRS-----LPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLK 226
+A ++ +G D + + E V QLWVDKYAP FTELLSDE+TNREVL W+K
Sbjct: 207 EARQAAGLDDGLDDAASNTTKVEENGAVESQLWVDKYAPRVFTELLSDEKTNREVLHWVK 266
Query: 227 QWDSCVFGSE---IRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSN 283
+WD CVFG + IR + R S+ + + + R W N NS
Sbjct: 267 EWDECVFGKKSVGIRKAPSPAFAGRGRGSSRGRGGYGDRGAGGRWAGQRGWGTEN--NSA 324
Query: 284 NLEYENSNSKGIQ---DSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVV 340
+K + D K R P KV+LL GPPGLGKTTLAHV A GY+ V
Sbjct: 325 PAASSPQPTKKSEPQFDEALNKDRDNRP-YAKVILLTGPPGLGKTTLAHVIATAAGYNPV 383
Query: 341 EVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSA 400
E+NASDDR+++ +K+L QM +V ++ +P CL++DEIDG G KGA++ +LK+++A
Sbjct: 384 EINASDDRTANLFMSKVLSATQMQAVFSEKKPNCLILDEIDGLTGGEKGAIKELLKVINA 443
Query: 401 ERKSNTAKENV----------------AKEDQPE-----------KISKKKGCKKASLLR 433
+ K A E P+ K+ +KK AS L+
Sbjct: 444 KDKKKAKAGQADDGEQGKGKGKKGRQDAVESSPKLKKGSSVLDLGKLGRKKKAPSASDLK 503
Query: 434 ----------------------PVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRL 471
P+ICICND YAPALR LR IA
Sbjct: 504 SSLTPSGKLRRHSLWTTPPQHPPIICICNDQYAPALRELRSIA----------------- 546
Query: 472 KHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMS 531
+ + E ++ + + L + DIRSCLNTLQF+ +K ++L + S VG KD+
Sbjct: 547 -NALHQEGLRADTQTVMALCNLADHDIRSCLNTLQFIKRKGKVLTADMLASTAVGHKDVL 605
Query: 532 RSAFDIWKEIFQK---RKTKRLRNSVS---------------------------SSSNVS 561
+S +D+W+EIFQK K K LR+ ++ +S +
Sbjct: 606 KSLYDVWREIFQKAAPSKHKALRDLITRQSAEKSDYYDTLGYDPDAPTRRYGGGASQHEQ 665
Query: 562 NEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLK--------------------- 600
+ FD L+ +++ G+ + I DG EN L+ +DP + K
Sbjct: 666 SRFDSLYETLADHGEMERIIDGCFENYLKFTMNDPCLAKARATDSSAFLSLFFALWPHTT 725
Query: 601 ----TVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQ 656
T CLD L +D M I + Q Y P + ++R S+ P + +P+S
Sbjct: 726 TACGTTDCLDWLEFTDEMSVLIQKEQHFTFRKYLPAAPMVINRHCSENSNPFVSFPQSDF 785
Query: 657 RYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSA 716
R ++ ++ + P I L++ ++V + + L+ I++ P +R + L S
Sbjct: 786 AMRQKLGTFKNMVNTFIANSQPEIRGTLNSGTVVMELVPYLVDIIA-PKIRQLNSALFSE 844
Query: 717 KEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKG--Y 774
+EK + V M S+ LTYK S + + L +PP++E + F+G Y
Sbjct: 845 EEKMHVQNAVGIMSSFKLTYK--PSADYQPTAAKDPKGRTNRLRLEPPLDELVRFEGLDY 902
Query: 775 RSNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADG 812
H L A K+++ E++ + I + + L DG
Sbjct: 903 DGRHRALGDAQKEMIAAEIKVEEIKKSERVAMKKLKDG 940
>gi|320168168|gb|EFW45067.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 1142
Score = 322 bits (824), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 257/883 (29%), Positives = 393/883 (44%), Gaps = 134/883 (15%)
Query: 127 GDRVYVKISSSGVEERVKKLDVRAH---SNSLTSEPIDVLLQKVEQEAFNK------ALN 177
GD YV + ++ + L R + L EP+ V++ +++ + A++
Sbjct: 331 GDMWYVVLKPKPSLQQQQPLHERMSLPDAGHLLPEPVSVMMARLDAQRVAAVYHHGVAMS 390
Query: 178 SSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEI 237
++ +S S PE QLWV+KYAP F +L+SD TNR +L WLKQWD CVFG
Sbjct: 391 TTPVKKSRPSQPES----SQLWVEKYAPRGFIDLISDPGTNRLLLSWLKQWDHCVFGKP- 445
Query: 238 RSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGN--RWSNGNFRNSNNLEYENSNSKGI 295
R F +RG + + N
Sbjct: 446 -----------RAIHFKPPPAAPAFKPFPASDRGKPGAAGGFRAAAGSQPQAANGGGGAH 494
Query: 296 QDSWHKKTRSTGPPEQKV--LLLCGPPGLGKTTLAHV----AAKHCGYHVVEVNASDDRS 349
+ K + P E +V +L+ GPPGLGKTTLAHV AK GYH VE+NASDDR+
Sbjct: 495 AAAGRKFAATAAPAESEVPLILMAGPPGLGKTTLAHVLAHVIAKTAGYHPVEINASDDRA 554
Query: 350 SSTIENKILDVVQMNSVMA--DSRPKCLVIDEIDGA--LGDGKGAVEVILKMVSAERKSN 405
N++L V+M+SV ++ P CL+IDEIDG+ S E+++
Sbjct: 555 EELFRNRVLAAVEMSSVFGSENTLPNCLIIDEIDGSSAAAINALIAIATAGSTSTEKRAT 614
Query: 406 TAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVS 465
T K AK +P L RP+ICICND++A +L++LRQ+A V F S S
Sbjct: 615 TGK--AAKLRRP-------------LQRPIICICNDIFARSLQALRQVALVVPFPNTSGS 659
Query: 466 RVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDK-KKEILNVMDIGSQV 524
R+ +RL IC E + + L TL E T DIRSC+NTLQFL + K ++ +I
Sbjct: 660 RLQTRLTQICKAERFELEANVLVTLCESTNNDIRSCINTLQFLSRHGKTAVSSSEIARLA 719
Query: 525 VGRKDMSRSAFDIWKEIFQKRKTKRLRNSV----------------------SSSSNVSN 562
VG+KD R F +W+ Q R ++L S S++ +S
Sbjct: 720 VGQKDTQRGLFLLWEYTLQARSLQQLLRSANDPSAAMSAKDSKLPTGALFGESNAGGLSR 779
Query: 563 EF---------DFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDL 613
E D + +I+ G+YD + G++EN L +++ DP M+K LD + D
Sbjct: 780 ELSRGRRLGFMDVVVPMITANGEYDTLLSGLYENYLSVRFTDPNMVKIQDALDWVAFYDQ 839
Query: 614 MHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWH 673
+H ++ R Q L Y P H S Q+ L++PK ++ + A ++ I +
Sbjct: 840 VHLHVYRNQMFHLMQYLPYTVAAFHVYCSAQQRQRLKFPKQHKDFVQALTQRQSIIANVT 899
Query: 674 SKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYS 733
S + L+ + LV D SPL +LS P +RP+ + LL+A E+ LA +V ++S++
Sbjct: 900 SGCTARVRAFLNAQQLVVDVASPLADVLS-PNMRPITVQLLNAAERKQLAAVVDVILSFN 958
Query: 734 LTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLALAVKQVLVHEV 793
L+++ + + + + V P + + +TF S L KQ++ HEV
Sbjct: 959 LSFEQVRQ---FDGMYDYV--------LTPNLLDVVTFPTPTSVRRKLPYPTKQLIAHEV 1007
Query: 794 EKQRIMQVTIGKSEHLADGYKENMDLAGEE-DSKTESAKTNNAAVSAKLIEKSKSLPYSR 852
E +R+ Q AGE+ + T SA ++ +A + S+
Sbjct: 1008 EIERLRQN------------------AGEQPPALTPSASSSTVGHAASGAPPQPTRQDSK 1049
Query: 853 QCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDR----FRKLSGKVSQDN 908
+ +L + V+PK D FF R + S S D
Sbjct: 1050 RAPAPNMDLLLGRSNKAPMPVKVEPKVVRD----------FFGRVVQVIEETSNPASMDA 1099
Query: 909 DN-----AVQKATVERDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
N A A + +KF EGF+NAV+ VR+RD L
Sbjct: 1100 SNHGPTKAAAAAQNALATFVTSYKFQEGFSNAVRHSVRIRDLL 1142
>gi|195342330|ref|XP_002037754.1| GM18121 [Drosophila sechellia]
gi|194132604|gb|EDW54172.1| GM18121 [Drosophila sechellia]
Length = 993
Score = 321 bits (823), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 247/840 (29%), Positives = 385/840 (45%), Gaps = 117/840 (13%)
Query: 128 DRVYVKISSSGVEERVKKLDVRAHSNSLTSEPIDVLLQKVEQEAFNKALNSSSEGQ-SDR 186
+R+YV+ S E+R +LD+ + + + +K+ QEA L+ ++ + +D
Sbjct: 250 ERIYVRFHSEDYEQR--QLDLISARGEVVGSLLGEAKEKIWQEAGEIVLSRATATEDADV 307
Query: 187 SLPEKPVVHE--QLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEV 244
++ E +LWVDKY P + +LLSDE TNR +L WLK WD VFG S E+
Sbjct: 308 TIVNSNANSEPGRLWVDKYKPRKYIDLLSDEMTNRSLLYWLKMWDKVVFGKAFHSKREQ- 366
Query: 245 LSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTR 304
A+ + + +SF ++ G SNG +R + + N+N +
Sbjct: 367 -EAVTGEGGTAGGAANHLNSFNKRT-GKFESNGGWRQRKSRQALNTNVDAL--------- 415
Query: 305 STGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMN 364
G P QKV LLCGPPGLGKTTLAH A+H GY+V E+NASDDRS + + + QM+
Sbjct: 416 --GRPMQKVALLCGPPGLGKTTLAHTIARHAGYNVREINASDDRSPEAFKLALENGTQMS 473
Query: 365 SVM-ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKK 423
SV+ D RP C+V+DEIDGA + +++ ++K +S D K
Sbjct: 474 SVLNEDKRPNCIVLDEIDGA---PRQSIDYLVKFIS---------------DAVYTKVKA 515
Query: 424 KGCKKAS--LLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMK 481
KG K L RP+ICICND+Y PALR LRQ+A V F +R+ RL I E +K
Sbjct: 516 KGAKAEHNVLKRPIICICNDVYDPALRPLRQVAFVVTFPPIDAARLAERLVKIAYKEQLK 575
Query: 482 TSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEI 541
T +L LAE + D+RSC++++QF + +K L + D+ + +G+KD + F +W I
Sbjct: 576 TDFGSLIALAEKSGNDVRSCISSMQFFNAQKHSLTLQDVLNNNLGQKDRHQGLFAVWDAI 635
Query: 542 FQ-KRKTKRLR--------------NSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHE 586
F+ +R K L+ + S ++ V N + +HS GDY+ + G++E
Sbjct: 636 FRIQRPRKTLQTDANKVDEPAQVTMTNTSVTTRVRNVLEVVHS----SGDYERLTQGVYE 691
Query: 587 NILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQK 646
N LQ + DP + L +D + I R Q +Y Y + H L + +
Sbjct: 692 NYLQQKMPDPNFTGVCEALKWFCFTDTVQHQISRQQNYSVYPYLQYGFVAWHLLFATLAW 751
Query: 647 PNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTL 706
P + +P ++ + +IF++ + +L+ D++ PLL + P L
Sbjct: 752 PKIAFPTRGFEFQQKSTNQRNIFQALCKGVTTSALGVGQGGTLLLDTV-PLLKRILSPQL 810
Query: 707 RPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPIN 766
R VA+ LLS KE+ DL + MV LT+ KS + H V +P ++
Sbjct: 811 RSVAVQLLSPKEQQDLRHTIEVMVDLGLTFVQVKS---------QEGHYV--FQTEPDLD 859
Query: 767 EFITFKGYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSK 826
F GY L +Q++ EV+ +RI + G +
Sbjct: 860 ALSAFPGYTG--LTLPYFSRQLIAREVDLERIRRAA---------------PKGGAPSAP 902
Query: 827 TESAKTNNAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKS 886
KT+ AA K LP L TL S +++ K
Sbjct: 903 AAKKKTSGAA---------KQLP----------NHLQTLKPKPISASNMHSAPKQQLTKD 943
Query: 887 FRSSSSFFDRFRKLSGKVSQDNDNAVQKATVERDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
F F +++ K + N K S P+ +++ EGF NAV++ V + + L
Sbjct: 944 F---------FGRITHKSTSTNSAEESKTDAIVKS-PIWYRYKEGFNNAVRKDVHIHELL 993
>gi|301612800|ref|XP_002935905.1| PREDICTED: chromosome transmission fidelity protein 18 homolog
[Xenopus (Silurana) tropicalis]
Length = 982
Score = 321 bits (822), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 251/785 (31%), Positives = 387/785 (49%), Gaps = 121/785 (15%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LWVD + P +TELLSD+ TNR +L WLK WD+ VFG E
Sbjct: 283 LWVDCFTPRHYTELLSDDYTNRCLLKWLKLWDTVVFGKE--------------------- 321
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYE-NSNSKGIQDSWHKKTRSTGPPEQKVLLL 316
+K + N NF+N + + S ++ ++ + P+ KV LL
Sbjct: 322 ------RVVKKPKANVDPRANFKNQKEQQSKFKSKAQITEEILEAELDQHNRPKNKVALL 375
Query: 317 CGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-DSRPKCL 375
CGPPGLGKTTLAHV A+H GY+VVE+NASDDRS + +I QM SV+ D RP CL
Sbjct: 376 CGPPGLGKTTLAHVIARHAGYNVVEMNASDDRSPEIFKTRIEAATQMKSVLGVDERPNCL 435
Query: 376 VIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPV 435
+IDEIDGA ++ ++L +++ RK AKE D KKK + LLRP+
Sbjct: 436 IIDEIDGA---PTVSINMLLSLIN--RKD--AKETEGGTDV--TTGKKKKKEGGLLLRPI 486
Query: 436 ICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTE 495
ICICND Y P+LR LRQ A + F Q SR+V RL I + MK + AL L E TE
Sbjct: 487 ICICNDQYVPSLRLLRQQAFMLNFPQTLPSRLVQRLYEITIKQGMKADTGALMALCEKTE 546
Query: 496 CDIRSCLNTLQFL-DKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLR--- 551
DIRSC+NTLQFL + K+ LN+ + + +G KD ++ F +W+EIFQ K +R R
Sbjct: 547 NDIRSCINTLQFLHGRGKKELNMRSVQTMKIGLKDQNKGLFSVWQEIFQLPKIQRKRIGQ 606
Query: 552 ------------------NSVSSS--SNVSNEFDFLHSLISNRGDYDVIFDGIHENILQL 591
V + S V+ F + L ++ G+Y+ + G+++N L +
Sbjct: 607 EIAIKDLHLFLGSGNESLGGVGKAPLSAVAQRFHHILHLSTSTGEYEKLTMGLYDNFLNM 666
Query: 592 QYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEW 651
+ + LD L +D+++ IM Q L Y P L + H L + P + +
Sbjct: 667 KVKESNFSTVCLALDWLEFTDIVNTTIMHGQNFQLMRYLPFLPVAFHLLFAASNVPRIAY 726
Query: 652 PKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVAL 711
P S+ ++ + ++ + ++I P I + +SLV D++ LL ++S P LRPV
Sbjct: 727 PNSHYEAQSKLNQMQNLLNAMVAEISPAIRTRVGPQSLVLDALCLLLDVIS-PKLRPVNT 785
Query: 712 HLLSAKEKNDLAQLVSAMVSYSLTY--KNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFI 769
L S KEK LA+L++ M++Y+LTY + T + L V DV D PI + +
Sbjct: 786 QLFSTKEKQQLAELINTMLAYNLTYHQERTMEGQYVYKLDPNV-EDVCRFP-DLPIRKPL 843
Query: 770 TFKGYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTES 829
T++ KQ++ E+E +R+ + + +++ + AG +++ +
Sbjct: 844 TYQA------------KQLIAREIELERMRRT---------EAFQQARN-AGRDNASANA 881
Query: 830 AKTNNAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRS 889
AK AK K +L + ++ L++ A+ + K D
Sbjct: 882 AKPTTETKGAKSTAKPAALNHEQR-----------LENIMKKAAAFEEKPEKD------- 923
Query: 890 SSSFFDR--FRKLSGKVSQDNDNAVQKATVER------DSLPLLFKFNEGFTNAVKRPVR 941
FF R +K++ V+ +A Q+ +VER + + F+FNEG +NAV+R +
Sbjct: 924 ---FFGRQIVKKVAAPVAA---SANQEESVERRIGKAVGNSDVWFRFNEGVSNAVRRNIY 977
Query: 942 MRDFL 946
++D L
Sbjct: 978 IKDLL 982
>gi|15617460|gb|AAL02426.1|AF287273_1 DNA replication accessory factor Cutlet [Drosophila melanogaster]
Length = 993
Score = 319 bits (818), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 244/840 (29%), Positives = 383/840 (45%), Gaps = 117/840 (13%)
Query: 128 DRVYVKISSSGVEERVKKLDVRAHSNSLTSEPIDVLLQKVEQEAFNKALNSSSEGQ-SDR 186
+R+YV+ S E+R +LD+ + + + +K+ QEA L+ ++ + +D
Sbjct: 250 ERIYVRFHSEDYEQR--QLDLISARGEVVGSLLGEAKEKIWQEAGEIVLSRATVAEDADV 307
Query: 187 SLPEKPVVHE--QLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEV 244
+L E +LWVDKY P + +LLSDE TNR +L WLK WD VFG S E+
Sbjct: 308 TLVNSNANSEPGRLWVDKYKPRKYIDLLSDEMTNRSLLYWLKMWDKVVFGKAFHSKREQ- 366
Query: 245 LSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTR 304
A+ + +SF ++ G SNG +R + + N+N +
Sbjct: 367 -EAVTGEGGTAGGAANQLNSFNKRT-GKFESNGGWRQRKSRQALNTNVDAL--------- 415
Query: 305 STGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMN 364
G P QKV LLCGPPGLGKTTLAH A+H GY+V E+NASDDRS + + + QM+
Sbjct: 416 --GRPMQKVALLCGPPGLGKTTLAHTIARHAGYNVREINASDDRSPEAFKLALENGTQMS 473
Query: 365 SVM-ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKK 423
SV+ D RP C+V+DEIDGA + +++ ++K +S D K
Sbjct: 474 SVLNEDKRPNCIVLDEIDGA---PRQSIDYLVKFIS---------------DAVYTKVKA 515
Query: 424 KGCKKAS--LLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMK 481
KG K L RP+ICICND+Y PALR LRQ+A V F +R+ RL I E +K
Sbjct: 516 KGAKAEHNVLKRPIICICNDVYDPALRPLRQVAFVVTFPPIDAARLAERLVKIAFKEQLK 575
Query: 482 TSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEI 541
T +L LAE + D+RSC++++QF + +K L + D+ + +G+KD + F +W I
Sbjct: 576 TDFGSLIALAEKSGNDVRSCISSMQFFNAQKHSLTLQDVLNNNLGQKDRHQGLFAVWDAI 635
Query: 542 FQKRKTKRLRNS---------------VSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHE 586
F+ ++ ++ ++ S ++ V N + +HS GDY+ + G++E
Sbjct: 636 FRIQRPRKTLHTDANKVDEPAQVTMTNTSVTTRVRNVLEVVHS----SGDYERLTQGVYE 691
Query: 587 NILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQK 646
N LQ + DP + L +D + I R Q +Y Y + H L + +
Sbjct: 692 NYLQQKMPDPNFTGVCEALKWFCFTDTVQHQISRQQNYSVYPYLQYGFVAWHLLFATLAW 751
Query: 647 PNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTL 706
P + +P ++ + +IF++ + +L+ D++ PLL + P L
Sbjct: 752 PKIAFPTRGFEFQQKSTNQRNIFQALCKGVTTSALGVGQGGTLLLDTV-PLLKRILSPQL 810
Query: 707 RPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPIN 766
R VA+ LLS KE+ DL + MV LT+ KS + H V +P ++
Sbjct: 811 RSVAVQLLSPKEQQDLRHTIEVMVDLGLTFVQVKS---------QEGHYV--FQTEPDLD 859
Query: 767 EFITFKGYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSK 826
F GY L +Q++ EV+ +RI + G +
Sbjct: 860 ALSAFPGYTG--LSLPYFSRQLIAREVDLERIRRAA---------------PKGGAPSAP 902
Query: 827 TESAKTNNAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKS 886
KT+ AA LP L TL S +++ K
Sbjct: 903 AAKKKTSGAAA---------QLP----------NHLQTLKPKPISASNMHSAPKQQLTKD 943
Query: 887 FRSSSSFFDRFRKLSGKVSQDNDNAVQKATVERDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
F F +++ K + N K S P+ +++ EGF NAV++ V + + L
Sbjct: 944 F---------FGRITHKSTSTNSAEESKTDAIVKS-PIWYRYKEGFNNAVRKDVHIHELL 993
>gi|28574716|ref|NP_787969.1| cutlet [Drosophila melanogaster]
gi|28380272|gb|AAN10380.2| cutlet [Drosophila melanogaster]
Length = 993
Score = 319 bits (817), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 244/840 (29%), Positives = 382/840 (45%), Gaps = 117/840 (13%)
Query: 128 DRVYVKISSSGVEERVKKLDVRAHSNSLTSEPIDVLLQKVEQEAFNKALNSSSEGQ-SDR 186
+R+YV+ S E+R +LD+ + + + K+ QEA L+ ++ + +D
Sbjct: 250 ERIYVRFHSEDYEQR--QLDLISARGEVVGSLLGEAKDKIWQEAGEIVLSRATAAEDADV 307
Query: 187 SLPEKPVVHE--QLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEV 244
+L E +LWVDKY P + +LLSDE TNR +L WLK WD VFG S E+
Sbjct: 308 TLVNSNANSEPGRLWVDKYKPRKYIDLLSDEMTNRSLLYWLKMWDKVVFGKAFHSKREQ- 366
Query: 245 LSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTR 304
A+ + +SF ++ G SNG +R + + N+N +
Sbjct: 367 -EAVTGEGGTAGGAANQLNSFNKRT-GKFESNGGWRQRKSRQALNTNVDAL--------- 415
Query: 305 STGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMN 364
G P QKV LLCGPPGLGKTTLAH A+H GY+V E+NASDDRS + + + QM+
Sbjct: 416 --GRPMQKVALLCGPPGLGKTTLAHTIARHAGYNVREINASDDRSPEAFKLALENGTQMS 473
Query: 365 SVM-ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKK 423
SV+ D RP C+V+DEIDGA + +++ ++K +S D K
Sbjct: 474 SVLNEDKRPNCIVLDEIDGA---PRQSIDYLVKFIS---------------DAVYTKVKA 515
Query: 424 KGCKKAS--LLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMK 481
KG K L RP+ICICND+Y PALR LRQ+A V F +R+ RL I E +K
Sbjct: 516 KGAKAEHNVLKRPIICICNDVYDPALRPLRQVAFVVTFPPIDAARLAERLVKIAFKEQLK 575
Query: 482 TSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEI 541
T +L LAE + D+RSC++++QF + +K L + D+ + +G+KD + F +W I
Sbjct: 576 TDFGSLIALAEKSGNDVRSCISSMQFFNAQKHSLTLQDVLNNNLGQKDRHQGLFAVWDAI 635
Query: 542 FQKRKTKRLRNS---------------VSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHE 586
F+ ++ ++ ++ S ++ V N + +HS GDY+ + G++E
Sbjct: 636 FRIQRPRKTLHTDANKVDEPAQVTMTNTSVTTRVRNVLEVVHS----SGDYERLTQGVYE 691
Query: 587 NILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQK 646
N LQ + DP + L +D + I R Q +Y Y + H L + +
Sbjct: 692 NYLQQKMPDPNFTGVCEALKWFCFTDTVQHQISRQQNYSVYPYLQYGFVAWHLLFATLAW 751
Query: 647 PNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTL 706
P + +P ++ + +IF++ + +L+ D++ PLL + P L
Sbjct: 752 PKIAFPTRGFEFQQKSTNQRNIFQALCKGVTTSALGVGQGGTLLLDTV-PLLKRILSPQL 810
Query: 707 RPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPIN 766
R VA+ LLS KE+ DL + MV LT+ KS + H V +P ++
Sbjct: 811 RSVAVQLLSPKEQQDLRHTIEVMVDLGLTFVQVKS---------QEGHYV--FQTEPDLD 859
Query: 767 EFITFKGYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSK 826
F GY L +Q++ EV+ +RI + G +
Sbjct: 860 ALSAFPGYTG--LSLPYFSRQLIAREVDLERIRRAA---------------PKGGAPSAP 902
Query: 827 TESAKTNNAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKS 886
KT+ AA LP L TL S +++ K
Sbjct: 903 AAKKKTSGAAA---------QLP----------NHLQTLKPKPISASNMHSAPKQQLTKD 943
Query: 887 FRSSSSFFDRFRKLSGKVSQDNDNAVQKATVERDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
F F +++ K + N K S P+ +++ EGF NAV++ V + + L
Sbjct: 944 F---------FGRITHKSTSTNSAEESKTDAIVKS-PIWYRYKEGFNNAVRKDVHIHELL 993
>gi|20151923|gb|AAM11321.1| SD07712p [Drosophila melanogaster]
Length = 874
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 244/840 (29%), Positives = 383/840 (45%), Gaps = 117/840 (13%)
Query: 128 DRVYVKISSSGVEERVKKLDVRAHSNSLTSEPIDVLLQKVEQEAFNKALNSSSEGQ-SDR 186
+R+YV+ S E+R +LD+ + + + +K+ QEA L+ ++ + +D
Sbjct: 131 ERIYVRFHSEDYEQR--QLDLISARGEVVGSLLGEAKEKIWQEAGEIVLSRATVAEDADV 188
Query: 187 SLPEKPVVHE--QLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEV 244
+L E +LWVDKY P + +LLSDE TNR +L WLK WD VFG S E+
Sbjct: 189 TLVNSNANSEPGRLWVDKYKPRKYIDLLSDEMTNRSLLYWLKMWDKVVFGKAFHSKREQ- 247
Query: 245 LSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTR 304
A+ + +SF ++ G SNG +R + + N+N +
Sbjct: 248 -EAVTGEGGTAGGAANQLNSFNKRT-GKFESNGGWRQRKSRQALNTNVDAL--------- 296
Query: 305 STGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMN 364
G P QKV LLCGPPGLGKTTLAH A+H GY+V E+NASDDRS + + + QM+
Sbjct: 297 --GRPMQKVALLCGPPGLGKTTLAHTIARHAGYNVREINASDDRSPEAFKLALENGTQMS 354
Query: 365 SVM-ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKK 423
SV+ D RP C+V+DEIDGA + +++ ++K +S D K
Sbjct: 355 SVLNEDKRPNCIVLDEIDGA---PRQSIDYLVKFIS---------------DAVYTKVKA 396
Query: 424 KGCKKAS--LLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMK 481
KG K L RP+ICICND+Y PALR LRQ+A V F +R+ RL I E +K
Sbjct: 397 KGAKAEHNVLKRPIICICNDVYDPALRPLRQVAFVVTFPPIDAARLAERLVKIAFKEQLK 456
Query: 482 TSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEI 541
T +L LAE + D+RSC++++QF + +K L + D+ + +G+KD + F +W I
Sbjct: 457 TDFGSLIALAEKSGNDVRSCISSMQFFNAQKHSLTLQDVLNNNLGQKDRHQGLFAVWDAI 516
Query: 542 FQKRKTKRLRNS---------------VSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHE 586
F+ ++ ++ ++ S ++ V N + +HS GDY+ + G++E
Sbjct: 517 FRIQRPRKTLHTDANKVDEPAQVTMTNTSVTTRVRNVLEVVHS----SGDYERLTQGVYE 572
Query: 587 NILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQK 646
N LQ + DP + L +D + I R Q +Y Y + H L + +
Sbjct: 573 NYLQQKMPDPNFTGVCEALKWFCFTDTVQHQISRQQNYSVYPYLQYGFVAWHLLFATLAW 632
Query: 647 PNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTL 706
P + +P ++ + +IF++ + +L+ D++ PLL + P L
Sbjct: 633 PKIAFPTRGFEFQQKSTNQRNIFQALCKGVTTSALGVGQGGTLLLDTV-PLLKRILSPQL 691
Query: 707 RPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPIN 766
R VA+ LLS KE+ DL + MV LT+ KS + H V +P ++
Sbjct: 692 RSVAVQLLSPKEQQDLRHTIEVMVDLGLTFVQVKS---------QEGHYV--FQTEPDLD 740
Query: 767 EFITFKGYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSK 826
F GY L +Q++ EV+ +RI + G +
Sbjct: 741 ALSAFPGYTG--LSLPYFSRQLIAREVDLERI---------------RRAAPKGGAPSAP 783
Query: 827 TESAKTNNAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKS 886
KT+ AA LP L TL S +++ K
Sbjct: 784 AAKKKTSGAAA---------QLPNH----------LQTLKPKPISASNMHSAPKQQLTKD 824
Query: 887 FRSSSSFFDRFRKLSGKVSQDNDNAVQKATVERDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
F F +++ K + N K S P+ +++ EGF NAV++ V + + L
Sbjct: 825 F---------FGRITHKSTSTNSAEESKTDAIVKS-PIWYRYKEGFNNAVRKDVHIHELL 874
>gi|195434969|ref|XP_002065474.1| GK15463 [Drosophila willistoni]
gi|194161559|gb|EDW76460.1| GK15463 [Drosophila willistoni]
Length = 980
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 240/775 (30%), Positives = 357/775 (46%), Gaps = 120/775 (15%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEE---VLSALRRHSTI 254
LWVDKY P + +LLSDE TNR +L WLK WD VFG S E+ + S
Sbjct: 300 LWVDKYKPRKYIDLLSDEMTNRSLLYWLKMWDKVVFGKVFHSKQEQEQQMAGGAGSGSGS 359
Query: 255 SQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVL 314
+SF ++ G SNG +R + N+N + G P QKV
Sbjct: 360 GSGAAAQLNSFNKRT-GKFESNGGWRQRKARQALNTNVDDL-----------GRPMQKVA 407
Query: 315 LLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM-ADSRPK 373
LLCGPPGLGKTTLAH A+H GY+V E+NASDDRS + + + QM+SV+ D RP
Sbjct: 408 LLCGPPGLGKTTLAHTIARHAGYNVREINASDDRSPEAFKLALENGTQMSSVLNEDKRPN 467
Query: 374 CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLR 433
C+V+DEIDGA + ++E ++K VS S AK +PE L R
Sbjct: 468 CIVLDEIDGA---PRQSIEYLVKFVSDGIYSKVK----AKGSKPEH---------NVLRR 511
Query: 434 PVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEY 493
P++CICND+Y PALR LRQIA V F +R+ RL + E MKT +L LAE
Sbjct: 512 PIVCICNDVYDPALRPLRQIAFVVQFPPIDSARLAERLIQVAKKEKMKTDFGSLIALAEK 571
Query: 494 TECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNS 553
+ D+RSC++++QF + +K L + D+ + +G+KD + FD+W IF+ ++ K+ +
Sbjct: 572 SGNDVRSCISSMQFFNAQKHSLTLQDVLNNNLGQKDRHQGLFDVWGAIFRIQRPKKQLAA 631
Query: 554 VSSSSN-----------------VSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDP 596
S+S N V N +HS GD++ + G++EN LQ + DP
Sbjct: 632 SSNSQNADEPAEVILTNMSVPTRVQNVLTVVHSC----GDFERLTQGVYENYLQQKMPDP 687
Query: 597 VMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQ 656
+ L DL+ I R Q +Y Y + H L + + P + +P
Sbjct: 688 NFNGVCEALQWFCFQDLLQNQINRQQNYSVYPYLQHGFVMWHLLFATLAWPKIAFPMRGF 747
Query: 657 RYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSA 716
++ + +I+++ + S L+ D++ L ILS P LR VA+ LLS
Sbjct: 748 EFQQKTQNQRNIYQALRKGVSSTSSGVGQGNVLLLDTVPMLKRILS-PQLRSVAVQLLSP 806
Query: 717 KEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRS 776
KE+ DL + MV LT+ KS + +P ++ F G S
Sbjct: 807 KEQYDLRHTIEVMVDLGLTFMQVKS-----------AEGHYVFQTEPDLDALANFPG--S 853
Query: 777 NHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTNNAA 836
L +Q++ EV+ +RI + + K N A
Sbjct: 854 LGLTLPYFSRQLIAREVDLERI---------------------------RRAAPKGNGKA 886
Query: 837 VSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDR 896
V E +K P ++ +P L TL + S S KP ++ + + FF R
Sbjct: 887 V-----ENTKKKP-TQTTSPRLPNHLQTLKPKQIS--SNKPNATAKQQ----LTKDFFGR 934
Query: 897 FRKLSGKVSQDNDNAVQKATVER--DSL---PLLFKFNEGFTNAVKRPVRMRDFL 946
S +S AT ER D++ P+ +++ EGF NAV++ V + + L
Sbjct: 935 ITHKSSAIS---------ATEERKTDAIVKSPIWYRYKEGFNNAVRKDVHLNELL 980
>gi|328703928|ref|XP_001944185.2| PREDICTED: chromosome transmission fidelity protein 18 homolog
[Acyrthosiphon pisum]
Length = 926
Score = 317 bits (813), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 259/836 (30%), Positives = 401/836 (47%), Gaps = 132/836 (15%)
Query: 129 RVYVKI-SSSGVEERVKKLDVRAHSNSLTSEPIDVLL----QKVEQ-EAFNKALNSSSEG 182
RVY++ S+ V E + L S L S+P+D ++ +K+E EA +N +
Sbjct: 203 RVYIRFRSADAVHEEISSLSWHTKSVQLLSDPVDEMIARAYEKIENNEAIRSGVNRNGVS 262
Query: 183 QSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSE 242
D S+ +LWV KY PN + +LLSDE TNR +L WLK WD VF E+
Sbjct: 263 ILDNSIDNTA----ELWVQKYKPNRYLDLLSDESTNRMLLQWLKIWDKVVFNKEV----- 313
Query: 243 EVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKK 302
NKK+ K+ GN+++ N L+ N
Sbjct: 314 --------------NKKRKVIDVYDKSAGNKFTKKNQTLDEGLDENNC------------ 347
Query: 303 TRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQ 362
P+ K+ LLCGPPGLGKTTLAH+ A+ GY+VVE+NASDDR+ + + ++ Q
Sbjct: 348 ------PKYKLALLCGPPGLGKTTLAHLVARQAGYNVVEMNASDDRNLTCFKRQLEATTQ 401
Query: 363 MNSVMA-DSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKIS 421
M SVM+ DSRP CLV+DEIDGA ++E ++K + +R + K + +E
Sbjct: 402 MCSVMSNDSRPNCLVLDEIDGA---PVASIEFLIKFATEKRATRKKKTDKKEE------- 451
Query: 422 KKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMK 481
K L RP+ICICND+Y PALR+LRQ A V F S R+V RL I + E++K
Sbjct: 452 -----KSFILKRPIICICNDVYVPALRNLRQNAFVLNFPPTSSVRLVERLMEISSYENIK 506
Query: 482 TSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEI 541
T A+T L T DIRSCL+TL + + +++ + + +G KDM + F +W+EI
Sbjct: 507 TDMGAMTALGTKTNNDIRSCLSTLSCF--RNQSVHLSHVKNANIGAKDMQKGLFTVWQEI 564
Query: 542 FQKRKTKRLRNSVSSSSNVSNEFDFLHSLIS-------NRGDYDVIFDGIHENILQLQYH 594
FQ +K+ N S+S S++ + + I+ + GDY+ + GI EN L L+
Sbjct: 565 FQIKKSCFENNPNSTSDGFSSQNNVMKDRINSVLKTVQSYGDYEKLCQGIFENYLILKPK 624
Query: 595 DPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWP-K 653
D + + L+ N D M I +Q L+ Y P T H L + P + +P
Sbjct: 625 DSSLTNIAEGLEWFCNFDKMMHVINSSQNYSLFPYLPYNFATWHCLFATFTWPKITYPSA 684
Query: 654 SYQRY--RNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVAL 711
+Y+ +N F + MD S I P I L + ++ D++ L+HI + P LR ++
Sbjct: 685 AYEATMKKNKFKQIMD---ELMSGIIPSIRTFLHRDQVLLDTMPLLMHI-AIPNLRSIST 740
Query: 712 HLLSAKEKNDLAQLVSAMVSYSLTY-KNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFIT 770
L + KEK DLA++V+ M+ Y L Y + +D N +P +++ +
Sbjct: 741 QLFTQKEKEDLAKVVNIMIDYGLNYFQERDADGSFN------------FVLNPCVDDAVK 788
Query: 771 FKGYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESA 830
F G + + A KQ++ E+E + + + ++ G E D+ E D E+
Sbjct: 789 FPGLET-FPTSSYATKQLISREIELEHLRK-------RMSHG--ELNDIIVEPDGLDENE 838
Query: 831 KTNNAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSS 890
K + K ++ S+ ++Q P+ LT PK G TK +
Sbjct: 839 KN---VSTPKGVKGSR----NKQVTPNHLQRLT-------------PKIVGSTKVT--KK 876
Query: 891 SSFFDR-FRKLSGKVSQDNDNAVQKATVERDSLPLLFKFNEGFTNAVKRPVRMRDF 945
FF R +G ++ + + K+ V F F EG++NAV++ V M+D
Sbjct: 877 KDFFGREIDSPAGHKHKEFRDEIVKSDV-------WFHFKEGYSNAVRKLVLMKDL 925
>gi|194759542|ref|XP_001962006.1| GF14649 [Drosophila ananassae]
gi|190615703|gb|EDV31227.1| GF14649 [Drosophila ananassae]
Length = 992
Score = 317 bits (813), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 248/840 (29%), Positives = 383/840 (45%), Gaps = 116/840 (13%)
Query: 128 DRVYVKISSSGVEERVKKLDVRAHSNSLTSEPIDVLLQKVEQEAFNKALNSSSEGQSDRS 187
+R+YV+ S E+R +L++ + + + +KV QEA L ++ Q
Sbjct: 248 ERIYVRFHSEDYEKR--QLEMVSARGEVEGSLLGEAKEKVWQEAKELVLRRAAADQDADI 305
Query: 188 LPEKPVVHEQ---LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEV 244
H + LWVDKY P + +LLSDE TNR +L WLK WD VFG S +
Sbjct: 306 TEITETSHTEPGRLWVDKYKPRKYIDLLSDEMTNRSLLYWLKMWDKVVFGKAFHSKQSQD 365
Query: 245 LSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTR 304
+ +SF ++ G SNG +R + + N+N
Sbjct: 366 STNTEGGGGGGAASNNQLNSFNKRT-GKFESNGGWRQRKSRQALNTN-----------VD 413
Query: 305 STGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMN 364
+ G P QKV LLCGPPGLGKTTLAH A+H GY+V E+NASDDRS + + + QM+
Sbjct: 414 TLGRPMQKVALLCGPPGLGKTTLAHTIARHAGYNVREINASDDRSPEAFKLALENGTQMS 473
Query: 365 SVM-ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKK 423
SV+ D RP C+V+DEIDGA + ++E ++K V+ S K
Sbjct: 474 SVLNEDKRPNCIVLDEIDGA---PRQSIEYLVKFVNDGIYSKV---------------KA 515
Query: 424 KGCKKAS--LLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMK 481
KG K L RP+ICICND+Y PALR LRQ+A V F +R+ RL I E +K
Sbjct: 516 KGAKAEHNILRRPIICICNDVYDPALRPLRQVAFVVSFPPIDSARLAERLIKIAQREQLK 575
Query: 482 TSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEI 541
T +L LAE + D+RSC++++QF + +K L + D+ + +G+KD + F++W I
Sbjct: 576 TDFGSLIALAEKSGNDVRSCISSMQFFNAQKHSLTLQDVLNNNLGQKDRHQGLFEVWDAI 635
Query: 542 FQKRKTKR-----LRN----------SVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHE 586
F+ ++ K+ L+N ++S ++ V N D +HS GDY+ + G++E
Sbjct: 636 FRIQRPKKTLQTDLKNNNEPAQVTMTNMSVATRVRNVLDVVHS----SGDYERLTQGVYE 691
Query: 587 NILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQK 646
N LQ + DP + L +D + I R Q +Y Y + H L + +
Sbjct: 692 NYLQQKMPDPNFSGVCEALKWFCFTDTLQHQISRQQNYSVYPYLQYGFVVWHLLFATLAW 751
Query: 647 PNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTL 706
P + +P ++ + +IF++ + + L+ D++ L ILS P L
Sbjct: 752 PKIAFPTRGFEFQQKSTNQRNIFQALRKGVTTSALGVGQGKILLLDTVPMLKRILS-PQL 810
Query: 707 RPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPIN 766
R VA+ LLS KE++DL + MV LT+ KS H V +P ++
Sbjct: 811 RSVAVQLLSVKEQHDLRHTIEVMVDLGLTFVQVKSLE---------GHYV--FQTEPDLD 859
Query: 767 EFITFKGYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSK 826
F GY L +Q++ EV+ +RI + GE K
Sbjct: 860 ALSAFPGYPG--LTLPYFSRQLIAREVDLERIRRAAPK---------------GGEPSKK 902
Query: 827 TESAKTNNAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKS 886
++K +A ++ K P S ++ A PK
Sbjct: 903 APASKKKSAPQLPNHLQTLKPKPIS------------------AANAHSAPKQ------- 937
Query: 887 FRSSSSFFDRFRKLSGKVSQDNDNAVQKATVERDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
+ + FF R + S+ D A A V+ P+ +++ EGF NAV++ V + + L
Sbjct: 938 -QLTKDFFGRITHKATSTSK-ADEAKTDAIVKS---PIWYRYKEGFNNAVRKDVHLHELL 992
>gi|156404594|ref|XP_001640492.1| predicted protein [Nematostella vectensis]
gi|156227626|gb|EDO48429.1| predicted protein [Nematostella vectensis]
Length = 602
Score = 317 bits (812), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 223/631 (35%), Positives = 311/631 (49%), Gaps = 81/631 (12%)
Query: 194 VHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHST 253
+H LWV+KY+P FTELLSD+ NR +L WLK WD VF R
Sbjct: 15 LHHGLWVEKYSPRHFTELLSDDAINRTLLQWLKLWDKVVFR--------------RERKP 60
Query: 254 ISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRS-TGPPEQK 312
+ K+ S+ +K+ N +FR ++ D+W + G P K
Sbjct: 61 VKHQPKEQKSNMDKKH------NKDFRKFGKGGLDS-------DAWTVSSFDDNGYPVHK 107
Query: 313 VLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM-ADSR 371
V LLCGPPGLGKTTLAHV A+H GY+VVE+NASDDR+ KI QM SV+ A+ R
Sbjct: 108 VALLCGPPGLGKTTLAHVIAQHAGYNVVEMNASDDRAVEVFRQKIEVATQMKSVLGANER 167
Query: 372 PKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASL 431
P CLVIDEIDGA A+ V+L ++ ++ D E KK K L
Sbjct: 168 PNCLVIDEIDGA---PTPAINVLLSVLKQKQSV------FILLDGGEVKKGKKKKKILQL 218
Query: 432 LRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLA 491
LRPVICICND + P+LR LRQ A V VF Q R+ SRL I E + T L L
Sbjct: 219 LRPVICICNDQFVPSLRQLRQQALVAVFPQTIPGRLSSRLLEIARREGVSTDMTTLLALC 278
Query: 492 EYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQ----KRKT 547
+ E DIRSCLNTLQF+ ++ L + + S VG+KD+ ++ F IW EIFQ KRK
Sbjct: 279 DKAENDIRSCLNTLQFVHRRHGKLALEHVQSTTVGQKDLHKNLFTIWHEIFQLPKPKRKR 338
Query: 548 KRLRNSVSSSSNVSNEFDFLHS------------------------LISNRGDYDVIFDG 583
L N+V + + + F S L S+ G Y+ + G
Sbjct: 339 FGLSNTVGGTQRRAEDIGFFTSDENLGVDPTQNVSSLTTRFHNILRLASSSGQYEKLMQG 398
Query: 584 IHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQ 643
+ EN L +++ D + V + L SD++ + I+++Q L Y L++ H L +
Sbjct: 399 LFENYLNIKFKDTGLSAVVSGTEWLEFSDVVERKILQSQSFMLRGYSSFLSVAFHLLYAT 458
Query: 644 IQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSP 703
L +P S ++ M++ +S S+ P I + L+ + D LL I++
Sbjct: 459 PTSSKLSYPSSQYECHLREVKTMNLLESLKSEACPRIRQVLNQRIALLDLFPLLLEIIT- 517
Query: 704 PTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTK-SDPLLNNLGNEVSHDVSTLSFD 762
PTLRPV + L SA+EK + L+ M++Y+LTY + SD N + D
Sbjct: 518 PTLRPVNMQLFSAREKKQVTDLIDTMIAYNLTYHQERNSDGQYN------------YTLD 565
Query: 763 PPINEFITFKGYRSNHYVLALAVKQVLVHEV 793
P I E + F G + H L A KQ++ EV
Sbjct: 566 PNIEEAVKFPGL-AQHKQLTYATKQLVAREV 595
>gi|390361909|ref|XP_780624.3| PREDICTED: chromosome transmission fidelity protein 18 homolog
[Strongylocentrotus purpuratus]
Length = 1028
Score = 316 bits (809), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 216/744 (29%), Positives = 360/744 (48%), Gaps = 92/744 (12%)
Query: 110 YASEIDGDCLPVTAPSGGDRVYVKISS----SGVEERVKKLDVRAHSNSLTSEPIDVLLQ 165
+ + +G+ + VT S G RV++K+ + V ++ ++ L + D L++
Sbjct: 208 FTRQPEGESMKVTG-SDGSRVFLKMKEEYDPTQVTKKFASKFGSRNTKGLLTMSYDNLVR 266
Query: 166 KVEQEAFNKALNSSS-------------------EGQSDRSLPEK--PVVHEQLWVDKYA 204
++E E K + SS +G PE+ + LWVDKYA
Sbjct: 267 QIEDEDRRKVIEESSRVSEKLRRELAKEYEDEDLDGDLIEGKPEEDDGKGNRGLWVDKYA 326
Query: 205 PNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSS 264
P + +LLSD+ NR +L WLK WD VFG E++ + + +
Sbjct: 327 PKDYVDLLSDDGVNRNLLFWLKLWDHVVFGKEVKQNKTKNKQEKWKGGGGGGGAGAGGGA 386
Query: 265 FTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGK 324
+ N N++ + R +LE ++ N P+ KV LLCGPPGLGK
Sbjct: 387 GQQPNNFNKFKSKFERELEDLELDDQNR----------------PKMKVALLCGPPGLGK 430
Query: 325 TTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-DSRPKCLVIDEIDGA 383
TTLAH+ A+H GY+V+E+NASDDRS +N++ +QM SV+ D RP CLVIDEIDG+
Sbjct: 431 TTLAHIIARHAGYNVIEMNASDDRSLEVFKNRLQSSIQMTSVLTPDQRPNCLVIDEIDGS 490
Query: 384 LGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLY 443
+ A+ +L ++ SN A KK+ + L RP+ICICND+Y
Sbjct: 491 ---PQAAINCLLTVIKGGGDSNQAGGGGG--------GKKRKKDQGPLKRPIICICNDVY 539
Query: 444 APALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLN 503
PAL+ LRQ+A V F + +R+ R+ I ++T +L L + DIRSCLN
Sbjct: 540 VPALKQLRQLAYVTHFPPTAAARLAQRMYAISKRNQLQTDLTSLMALCVKADNDIRSCLN 599
Query: 504 TLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKR-------------- 549
TLQFL ++ + + + + S +G+KD +S + +W+++FQ K K+
Sbjct: 600 TLQFLQQQGKPVTLGLVHSLNIGQKDQHKSLYTVWQQLFQLPKAKKKTYTNPHDLKQGQR 659
Query: 550 -------LRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTV 602
++ S ++++ F + +I + G+++ + +G+ EN L++++ DP M
Sbjct: 660 LGVVSESMQGLDSDMTSLTARFHHMLHVIQSCGEHEKLMNGVFENYLEVKFKDPHMDAIN 719
Query: 603 KCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAF 662
D L SD++ I RTQ + P + +T H L + + + +P + +
Sbjct: 720 MASDWLVFSDIVQSKIARTQNYIFGRFLPFVPLTFHMLFACVAYTKIRYPNTGFEIKTKT 779
Query: 663 MEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDL 722
++ ++ S+I P I + ++ + V + + PLL I++ P RP+ L S EK L
Sbjct: 780 ELIKNLVETMRSEIDPSIRQGINLKLAVTELLPPLL-IITQPAFRPINTQLFSTAEKKQL 838
Query: 723 AQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVST-LSFDPPINEFITFKGYRSNHYVL 781
+LV M++Y+LTY+ +S N + + D+ S PP+ + IT+
Sbjct: 839 RELVDTMIAYNLTYRQERSMEGTYNYNLDPNLDIVVRFSDSPPVRQ-ITY---------- 887
Query: 782 ALAVKQVLVHEV--EKQRIMQVTI 803
A KQ++ E+ EK R + I
Sbjct: 888 --AAKQLIAREIALEKMRRSEAVI 909
>gi|148228726|ref|NP_001084621.1| chromosome transmission fidelity protein 18 homolog [Xenopus laevis]
gi|82237184|sp|Q6NU40.1|CTF18_XENLA RecName: Full=Chromosome transmission fidelity protein 18 homolog
gi|46249842|gb|AAH68761.1| Chtf18 protein [Xenopus laevis]
Length = 1000
Score = 315 bits (807), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 272/894 (30%), Positives = 427/894 (47%), Gaps = 151/894 (16%)
Query: 117 DCLPVTAPSGGDRVYVKISSSGVEERVKKLDVRAHSNS---LTSEPIDVLLQKVEQEAFN 173
D + VT+ + G RVY+ + + K+ +++ +S L P L ++V E
Sbjct: 194 DYINVTS-TDGSRVYMALKEDNDGAQQKQGNLKWNSGQQLHLLGVPFSYLKEQVNDEHRR 252
Query: 174 KALNSSSE-------------GQSDRSLPE------------KPVVHEQLWVDKYAPNSF 208
K L S G++D + E +P H LWVD++ P +
Sbjct: 253 KVLEESQRLTEMLNSQINEEFGENDSEILENDDNAGEEDDEDEPSSH-SLWVDRFTPRHY 311
Query: 209 TELLSDEQTNREVLLWLKQWDSCVFGSE-IRSTSEEVLSALRRHSTISQNKKQNDSSFTR 267
TELLSD+ TNR +L WLK WD+ VFG E + + ++ H +N+K+ S F
Sbjct: 312 TELLSDDYTNRCLLKWLKLWDTVVFGKERVVRKPKAIVDPRANH---FKNQKEQQSKFKT 368
Query: 268 KNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTL 327
K ++ ++ + P+ KV LLCGPPGLGKTTL
Sbjct: 369 K-----------------------AQITEEILEAELDHHNRPKNKVSLLCGPPGLGKTTL 405
Query: 328 AHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-DSRPKCLVIDEIDGALGD 386
AHV A+H GY+VVE+NASDDRS +I QM SV+ D RP CL+IDEIDGA
Sbjct: 406 AHVIARHAGYNVVEMNASDDRSPEAFRTRIEAATQMKSVLGVDERPNCLIIDEIDGA--- 462
Query: 387 GKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPA 446
++ ++L +V+ RK AKE A+ KKK + LLRP+ICICND Y P+
Sbjct: 463 PTVSINMLLSLVN--RKD--AKE--AEGGTEATTGKKKKKEGGLLLRPIICICNDQYVPS 516
Query: 447 LRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQ 506
LR LRQ A + F Q SR+V RL I + MK + AL L E TE DIRSC+NTLQ
Sbjct: 517 LRQLRQQAFMLNFPQTMPSRLVQRLYEIAVKQGMKADTGALMALCEKTENDIRSCINTLQ 576
Query: 507 FL-DKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSN------ 559
FL + K+ LN+ + + +G KD ++ F +W+EIFQ K +R R ++N
Sbjct: 577 FLHGRGKKELNMRSVQTMRIGLKDQNKGLFSVWQEIFQLPKIQRKRIGQEVATNDLHLLL 636
Query: 560 -----------------VSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTV 602
V+ F + L ++ G+Y+ + G+++N L ++ +
Sbjct: 637 GSENDSLGMLAKPPLNAVAQRFHHILHLSTSTGEYEKLTMGLYDNFLNMKVKESNFSTVC 696
Query: 603 KCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAF 662
LD L +D+++ IM Q L Y P L + H L + P + +P S+ ++
Sbjct: 697 LALDWLEFTDIVNSTIMHGQNFQLMRYLPFLPVAFHLLFAASNVPRIAYPSSHYEAQSKL 756
Query: 663 MEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDL 722
+ ++ + S+I P I + +SLV D++ LL +LS P LRPV L S KEK L
Sbjct: 757 NQMQNLLNAMVSEISPAIRTRVGPQSLVLDALCLLLDVLS-PKLRPVNTQLFSTKEKQQL 815
Query: 723 AQLVSAMVSYSLTY--KNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYV 780
A+L++ M++Y+LTY + T + L V DV D P+ + +T++
Sbjct: 816 AELINTMLAYNLTYHQERTMEGQYVYKLDPNV-EDVCRFP-DLPVRKPLTYQ-------- 865
Query: 781 LALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTNNAAVSAK 840
KQ++ E+E +R+ + + +++ + AG +++ +A AK
Sbjct: 866 ----TKQLIAREIELERMRRT---------EAFQQARN-AGRDNTTAAAAVKTADPKGAK 911
Query: 841 LIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDR--FR 898
K +L + ++ + + +T KP+ FF R +
Sbjct: 912 SAAKPAALNHEQRLE----------NIMKKATFEEKPE------------KDFFGRQIVK 949
Query: 899 KLSGKVSQDNDNAVQKATVER------DSLPLLFKFNEGFTNAVKRPVRMRDFL 946
K++ V+ +A Q+ +VER + + F+FNEG +NAV+R + ++D L
Sbjct: 950 KVAAPVTA---SANQEESVERRIGKAVGNSDVWFRFNEGVSNAVRRNIYIKDLL 1000
>gi|327287589|ref|XP_003228511.1| PREDICTED: chromosome transmission fidelity protein 18 homolog
[Anolis carolinensis]
Length = 987
Score = 314 bits (804), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 235/777 (30%), Positives = 358/777 (46%), Gaps = 118/777 (15%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LWVD+++P + ELLSD+ TNR +L WLK WD VFG E + R +T +
Sbjct: 301 LWVDRFSPRHYVELLSDDFTNRCLLKWLKLWDRVVFGRE------QPPKKARHEATPAPR 354
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
+ SS +W S ++ +++ + P+ KV LLC
Sbjct: 355 PAKEQSS--------KW--------------KSKAQATEEALEAQLDPQNRPKYKVALLC 392
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM-ADSRPKCLV 376
GPPGLGKTTLAHV AKH GY+VVE+NASDDRS + +I QM SV+ A+ +P CLV
Sbjct: 393 GPPGLGKTTLAHVIAKHAGYNVVEMNASDDRSPEAFKTRIEAATQMRSVLGANEKPNCLV 452
Query: 377 IDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVI 436
IDEIDGA ++ V+L +V+ ++ KE +P K+ + LLRP+I
Sbjct: 453 IDEIDGA---PTASINVLLGIVN--------RKAAEKESEPGSGKTKRRKEGGLLLRPII 501
Query: 437 CICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTEC 496
CICND Y P+LR LRQ + + F S SR+V RL+ + + MK AL L E TE
Sbjct: 502 CICNDQYVPSLRLLRQQSFLLNFPTTSQSRLVQRLQEVTACQGMKADPGALVALCEKTEN 561
Query: 497 DIRSCLNTLQFL-DKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRN--- 552
DIRSC+NTLQFL + K+ L + VG KD ++ F +W+EIFQ K +R R
Sbjct: 562 DIRSCINTLQFLYSRGKKELTARTVQMAKVGLKDQNKGLFSVWQEIFQLPKMQRQRIGTG 621
Query: 553 -SVSSSSN--------------VSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPV 597
S+SS N F + L ++ G+++ + G+ EN L+++
Sbjct: 622 LSMSSGGNEGLFTASGRTSVNAAEQRFQRILHLGASSGEHEKLSQGLFENFLRMKVKGSS 681
Query: 598 MLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQR 657
+ L+ LG +DL++Q + Q L + P L + H L + P+L +P S Q
Sbjct: 682 LDLACLGLEWLGFADLVNQVALNGQSFHLLRFLPFLPVAFHFLFAAPNVPHLAFPSSQQE 741
Query: 658 YRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAK 717
++ ++ S + + P + LV + + LL I+S P LRPV L S K
Sbjct: 742 CLAKRSQRQNLVSSMATGMGPGSRSRFGFQVLVLEVLDFLLEIIS-PKLRPVNPQLFSQK 800
Query: 718 EKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSN 777
E+ LA+LV M++++LT+ +S + +P + E F S
Sbjct: 801 ERQQLAELVGTMLAFNLTFLQERS-----------PDGTYLFALEPNVEEVCRFPDLPSR 849
Query: 778 HYVLALAVKQVLVHEV--EKQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTNNA 835
L+ KQ++ E+ EK R M+ + + E+ K +S N+
Sbjct: 850 K-PLSYQTKQLIAREIDLEKMRRMEALLQARNADPFSMTSSSQEKEEQKGKLKSGIRNHE 908
Query: 836 AVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFD 895
+++++ +T KP+ + FF
Sbjct: 909 QRLDQIVKR--------------------------ATFEEKPE------------TDFFG 930
Query: 896 RFRKLSGKVSQDNDNAVQKATVERD------SLPLLFKFNEGFTNAVKRPVRMRDFL 946
R D +K VE+ + + F+FNEG +NAV+R V ++D
Sbjct: 931 RIIVKKKATPSTADQIPEKNPVEKQIGKAVGNSDVWFRFNEGVSNAVRRNVYIKDLF 987
>gi|194855767|ref|XP_001968610.1| GG24404 [Drosophila erecta]
gi|190660477|gb|EDV57669.1| GG24404 [Drosophila erecta]
Length = 993
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 247/845 (29%), Positives = 389/845 (46%), Gaps = 127/845 (15%)
Query: 128 DRVYVKISSSGVEERVKKLDVRAHSNSLTSEPIDVLLQKVEQEAFNKALNSSSEGQSDRS 187
+R+YV+ S E+R +L++ + + + K+ QEA L+ ++ +
Sbjct: 250 ERIYVRFHSEEYEQR--QLELISARGEVAGSLLGEAKVKIWQEAGEIVLSRAAAAED--- 304
Query: 188 LPEKPVVHE-------QLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRST 240
P+ +V+ +LWVDKY P + +LLSDE TNR +L WLK WD VFG S
Sbjct: 305 -PDVTLVNSNSNSEIGRLWVDKYKPRKYIDLLSDEMTNRSLLYWLKMWDKVVFGKAFHSK 363
Query: 241 SEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWH 300
E+ A+ + +SF ++ G SNG +R + + N+N +
Sbjct: 364 REQ--EAVTGEGGTAGGAGNQLNSFNKRT-GKFESNGGWRQRKSRQALNTNVDAL----- 415
Query: 301 KKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDV 360
G P QKV LLCGPPGLGKTTLAH A+H GY+V E+NASDDRS + + +
Sbjct: 416 ------GRPMQKVALLCGPPGLGKTTLAHTIARHAGYNVREINASDDRSPEAFKLALENG 469
Query: 361 VQMNSVM-ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEK 419
QM+SV+ D RP C+V+DEIDGA + +++ ++K +S S
Sbjct: 470 TQMSSVLNEDKRPNCIVLDEIDGA---PRQSIDYLVKFISDAVYSKV------------- 513
Query: 420 ISKKKGCKKAS--LLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
K KG K L RP+ICICND+Y PALR LRQ+A V F +R+ RL I
Sbjct: 514 --KAKGAKAEHNVLKRPIICICNDVYDPALRPLRQVAFVVSFPPIDAARLAERLVKIAYK 571
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
E +KT +L LAE + D+RSC++++QF + +K L + D+ + +G+KD + F +
Sbjct: 572 EQLKTDFGSLIALAEKSGNDVRSCISSMQFFNAQKHSLTLQDVLNNNLGQKDRHQGLFAV 631
Query: 538 WKEIFQ-KRKTKRLR--------------NSVSSSSNVSNEFDFLHSLISNRGDYDVIFD 582
W IF+ +R K L+ + S ++ V N + +HS GD++ +
Sbjct: 632 WDAIFRIQRPRKTLQTDANKVDEPAQVTMTNTSVTTRVRNVLEVVHS----SGDFERLTQ 687
Query: 583 GIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVS 642
G++EN LQ + DP + L +D + I R Q +Y Y + H L +
Sbjct: 688 GVYENYLQQKMPDPNFTGVCEALKWFCFTDSLQHQISRQQNYSVYPYLQYGFVVWHLLFA 747
Query: 643 QIQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILS 702
+ P + +P ++ + +IF++ + +L+ D++ PLL +
Sbjct: 748 TLAWPKIAFPTRGFEFQQKSTNQRNIFQAICKGVTTSALGVGQGRTLLLDTV-PLLKRIL 806
Query: 703 PPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFD 762
P LR VA+ LLS KE+ DL + MV LT+ KS + H V +
Sbjct: 807 SPQLRSVAVQLLSPKEQQDLRHTIEVMVDLGLTFVQVKS---------QEGHYV--FQTE 855
Query: 763 PPINEFITFKGYRSNHYVLALAVKQVLVHEVEKQRIMQVT-IGKSEHLADGYKENMDLAG 821
P ++ F GY L +Q++ EV+ +RI + G + A
Sbjct: 856 PDLDALSAFPGYTG--LSLPYFSRQLIAREVDLERIRRAAPKGGAPSAA----------- 902
Query: 822 EEDSKTESAKTNNAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSG 881
+AKT + +A+L P+ +L S S+ S PK
Sbjct: 903 -------AAKTKPSGAAAQL--------------PNHLQILKPKPISVSNMHSA-PKQ-- 938
Query: 882 DTKKSFRSSSSFFDRFRKLSGKVSQDNDNAVQKATVERDSLPLLFKFNEGFTNAVKRPVR 941
+ + FF R ++ K + N K S P+ +++ EGF NAV++ V
Sbjct: 939 ------QLTKDFFGR---ITHKTTATNSAEESKTDAIVKS-PIWYRYKEGFNNAVRKDVH 988
Query: 942 MRDFL 946
+ + L
Sbjct: 989 IHELL 993
>gi|302837440|ref|XP_002950279.1| hypothetical protein VOLCADRAFT_104663 [Volvox carteri f.
nagariensis]
gi|300264284|gb|EFJ48480.1| hypothetical protein VOLCADRAFT_104663 [Volvox carteri f.
nagariensis]
Length = 1576
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 194/594 (32%), Positives = 290/594 (48%), Gaps = 106/594 (17%)
Query: 197 QLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQ 256
+LWVDKYAP F LLSDE+TNR+V LW+K WD CVFG R ++
Sbjct: 695 RLWVDKYAPRHFMSLLSDERTNRQVALWVKDWDECVFG--------------RGGTSAGV 740
Query: 257 NKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLL 316
+ ++ RK ++S+ P+QKVLL+
Sbjct: 741 PGSKPGAAAGRK---------------------ADSR---------------PQQKVLLI 764
Query: 317 CGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLV 376
GPPGLGKTTLAHV A+HCGYH E+NASDDR+++T+ KI D VQM +V+ RP C++
Sbjct: 765 GGPPGLGKTTLAHVVARHCGYHPYEINASDDRTAATLLTKIQDAVQMTAVLGGGRPNCVI 824
Query: 377 IDEIDGALGDGK--GAVEVILKMV-------------------------------SAERK 403
+DE+DGA G + GAV +LK+V
Sbjct: 825 VDEVDGATGGSETGGAVAALLKLVRAGEGGAAGSGGKGGGKATGGGDDDDDDGSGGENEG 884
Query: 404 SNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPS 463
++ K+ V + +KG ++ L RP+ICICNDLYAPALR LR IA+V F P
Sbjct: 885 ADGGKKTVGAGGAKRRGGGRKGSQQRPLCRPIICICNDLYAPALRPLRDIARVFHFSPPV 944
Query: 464 VSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKE---------- 513
R+ +RL IC E ++ AL L E T+ D+R+CLNTLQFL ++ E
Sbjct: 945 SERLTARLVQICQAEQLEADPAALRLLVERTDRDVRACLNTLQFLARRGEKAGAGGGAAG 1004
Query: 514 ---ILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSL 570
+++ DI S + KD ++SA D+W + R R + + L L
Sbjct: 1005 GRRTIDIKDIESLNIASKDTTQSAMDMWTLLLSTSAAGRRRGGGAGGMAPGSAAGRLTEL 1064
Query: 571 ---ISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLY 627
+ + GDYD++ +G+HEN+ ++++ D + +T + +G +D++ + RT
Sbjct: 1065 CNRLQDFGDYDLVLNGLHENLPRVRFMDINLSRTAEVEATIGLADVLLRSCRRTGDFSSL 1124
Query: 628 VYQPPLAITVHRLVSQIQKP-NLEWPKSYQRYRNAFMEKMDIFKSWHSKI---PPYISRH 683
+ PPL V L +Q ++P L WP+ + +SW S P + H
Sbjct: 1125 RFVPPLLANVRALAAQPERPRQLAWPRLGAEVARRASATSQLVRSWASNRGTDPLVAASH 1184
Query: 684 LSTESLVEDSISPLLHIL-SPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTY 736
T ++E ++P L L S P +R VA ++++A E+ L + M+ Y L Y
Sbjct: 1185 GITVMMLE--LAPALRALVSRPPIRAVAPNMMTADEQAALRRTADIMLHYGLRY 1236
>gi|241859994|ref|XP_002416257.1| chromosome transmission fidelity factor, putative [Ixodes
scapularis]
gi|215510471|gb|EEC19924.1| chromosome transmission fidelity factor, putative [Ixodes
scapularis]
Length = 833
Score = 313 bits (802), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 208/621 (33%), Positives = 314/621 (50%), Gaps = 67/621 (10%)
Query: 194 VHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHST 253
V LWV+KY P F ELLSD+ NR +L WLK WD VFG + + H
Sbjct: 163 VAASLWVEKYRPRHFMELLSDDGVNRTLLQWLKLWDCVVFGRNPKP---------KPHPE 213
Query: 254 ISQNKKQNDSSF---TRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPE 310
Q +++F T + + W+ + + K ++ HK+ P+
Sbjct: 214 KLQQPGTGNNTFPGNTAQESFDPWAFHPMKVA-------MEKKDLELDEHKR------PQ 260
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-D 369
QKV+LL GPPGLGKTTLAHV A+H GY+VVE+NASDDRS + + QM +V+ D
Sbjct: 261 QKVVLLYGPPGLGKTTLAHVIARHAGYNVVELNASDDRSPEVFKTTLEAATQMRAVLGQD 320
Query: 370 SRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKA 429
RP CL+IDEIDGA ++ +++ M+ + +NT +K S+K+G +
Sbjct: 321 PRPNCLIIDEIDGAPA---ASINMLVNMIKSSGPTNTGTG--------KKRSRKEG---S 366
Query: 430 SLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTT 489
LLRPVICICN+LY PALR LRQIA F Q + +R+ SRL+ I E MK + A+
Sbjct: 367 LLLRPVICICNELYVPALRPLRQIALALHFPQIAKTRLASRLQEIMRRERMKGDTAAILA 426
Query: 490 LAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKR 549
L E E D+RSCL+TLQF+ +K+ L + D+ + VG+KD+ R F + +E+FQK + R
Sbjct: 427 LCEKAENDVRSCLSTLQFVQSRKQQLTLTDVRTFNVGQKDIQRGLFSVLQEVFQKPRNDR 486
Query: 550 ------------LRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPV 597
+ + S ++ E + +HS GDY+ + +N L + + DP
Sbjct: 487 KAYRQLYGDEDPTLSRLRSPEDLRFE-NLVHS-TQAFGDYEKFVQALFDNYLLVNFKDPN 544
Query: 598 MLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQR 657
+ + L D + + R Q LY Y P +A H S + + + S+
Sbjct: 545 FQTIQQGPEWLCFVDGLLNTVHRLQNYSLYPYLPYVAPAFHCAFSVLPYTKMVFQNSFLE 604
Query: 658 YRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAK 717
R + +I S + P +L+ +LV D + L IL PT+RPV L SA+
Sbjct: 605 ARGKETQLSNILSSLRADTSPQSRCYLTGSTLVLDVLPWLTGILQ-PTIRPVNTQLFSAE 663
Query: 718 EKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSN 777
E+ L Q++S M S++LTY ++ + V + +P I+E F G +
Sbjct: 664 ERQKLQQVISVMASFNLTYHQART-----------ADGVYQYALEPSIDEVTRFPGV-TQ 711
Query: 778 HYVLALAVKQVLVHEVEKQRI 798
L A KQ++ E+E +++
Sbjct: 712 PPQLTYATKQLIARELEVEKM 732
>gi|195576414|ref|XP_002078071.1| GD22729 [Drosophila simulans]
gi|194190080|gb|EDX03656.1| GD22729 [Drosophila simulans]
Length = 978
Score = 312 bits (800), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 243/840 (28%), Positives = 382/840 (45%), Gaps = 132/840 (15%)
Query: 128 DRVYVKISSSGVEERVKKLDVRAHSNSLTSEPIDVLLQKVEQEAFNKALNSSSEGQ-SDR 186
+R+YV+ S E+R +LD+ + + + +K+ QEA L+ ++ + +D
Sbjct: 250 ERIYVRFHSEDYEQR--QLDLISARGEVVGSLLGEAKEKIWQEAGEIVLSRATATEDADE 307
Query: 187 SLPEKPVVHE--QLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEV 244
+L E +LWVDKY P + +LLSDE TNR +L WLK WD VFG S E+
Sbjct: 308 TLVNSNADSEPGRLWVDKYKPRKYIDLLSDEMTNRSLLYWLKMWDKVVFGKAFHSKREQ- 366
Query: 245 LSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTR 304
A+ + + +SF ++ G SNG +R + + N+N +
Sbjct: 367 -EAVTGEGGSAGGAGNHLNSFNKRT-GKFESNGGWRQRKSRQALNTNVDAL--------- 415
Query: 305 STGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMN 364
G P QKV LLCGPPGLGKTTLAH A+H GY+V E+NASDDRS + + + QM+
Sbjct: 416 --GRPMQKVALLCGPPGLGKTTLAHTIARHAGYNVREINASDDRSPEAFKLALENGTQMS 473
Query: 365 SVM-ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKK 423
SV+ D RP C+V+DEIDGA + +++ ++K +S D K
Sbjct: 474 SVLNEDKRPNCIVLDEIDGA---PRQSIDYLVKFIS---------------DAVYTKVKA 515
Query: 424 KGCKKAS--LLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMK 481
KG K L RP+ICICND+Y PALR LRQ+A V F +R+ RL I E +K
Sbjct: 516 KGAKAEHNVLKRPIICICNDVYDPALRPLRQVAFVVTFPPIDAARLAERLVKIAYKEQLK 575
Query: 482 TSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEI 541
T +L LAE + D+RSC++++QF + +K L + D+ + +G+KD + F +W I
Sbjct: 576 TDFGSLIALAEKSGNDVRSCISSMQFFNAQKHSLTLQDVLNNNLGQKDRHQGLFAVWDAI 635
Query: 542 FQ-KRKTKRLR--------------NSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHE 586
F+ +R K L+ + S ++ V N + +HS GDY+ + G++E
Sbjct: 636 FRIQRPRKTLQTDANKVDEPAQVTMTNTSVTTRVRNVLEVVHS----SGDYERLTQGVYE 691
Query: 587 NILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQK 646
N LQL+ DP + I + Q +Y Y + H L + +
Sbjct: 692 NYLQLRMPDP---------------NFTGHQISKQQNYSVYPYLQYGFVAWHLLFATLAW 736
Query: 647 PNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTL 706
P + +P ++ + +IF++ + +L+ D++ PLL + P L
Sbjct: 737 PKIAFPTRGFEFQQKSTNQRNIFQALCKGVTTSALGVGQGVTLLLDTV-PLLKRILSPQL 795
Query: 707 RPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPIN 766
R VA+ LLS KE+ DL + MV LT+ KS + H V +P ++
Sbjct: 796 RSVAVQLLSPKEQQDLRHTIEVMVDLGLTFVQVKS---------QEGHYV--FQTEPDLD 844
Query: 767 EFITFKGYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSK 826
F GY L +Q++ EV+ +RI + +
Sbjct: 845 ALSAFPGYTG--LTLPYFSRQLIAREVDLERIRR------------------------AA 878
Query: 827 TESAKTNNAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKS 886
+ + A K + +K LP L TL S +++ K
Sbjct: 879 PKGGAPSAPAAKKKTLGAAKQLP----------NHLQTLKPKPISASNMHSAPKQQLTKD 928
Query: 887 FRSSSSFFDRFRKLSGKVSQDNDNAVQKATVERDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
F F +++ K + N K S P+ +++ EGF NAV++ V + + L
Sbjct: 929 F---------FGRITHKSTSTNSAEESKTDAIVKS-PIWYRYKEGFNNAVRKDVHIHELL 978
>gi|325180998|emb|CCA15408.1| chromosome transmission fidelity protein putative [Albugo laibachii
Nc14]
Length = 875
Score = 311 bits (796), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 218/719 (30%), Positives = 339/719 (47%), Gaps = 99/719 (13%)
Query: 99 RVEVEEKFVSRYASEIDGDCLPVTAPSGGDRVYVKISSSGVEERVKKLDVRAHSNSLTSE 158
R E E++V R I D + + P G R K S + KLDV + +
Sbjct: 123 REEENEQYVLRQPP-IMVDSISIVLPGGERRFLRKKSRVESGSAITKLDV------VLAR 175
Query: 159 PIDVLLQKVEQEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTN 218
+ ++ +E+ +++ + + E+ QLWVDKY P FT+LLSDE+ N
Sbjct: 176 SVPEMISSIEERQVQALVSNENAIAEKKPAKEQMKTDHQLWVDKYRPKRFTDLLSDEKVN 235
Query: 219 REVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGN 278
REVL W+K+WD VF N S +KN N
Sbjct: 236 REVLFWIKEWDKIVFLDH-----------------------PNHSYSLQKN------AAN 266
Query: 279 FRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYH 338
+++ EN + D H R P+ K++LLCGPPG GKTTLAH+ AKH GY+
Sbjct: 267 LEKRTSIKEENPVNTSKTDR-HLDAR----PKVKIILLCGPPGAGKTTLAHIIAKHAGYN 321
Query: 339 VVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGAL--GDGKGAVEVILK 396
VE+NASDDR++ + NKI+ ++M S+ D RP C+++DEIDGA+ GD K A+ I +
Sbjct: 322 AVEINASDDRTAQVLRNKIISAMEMQSLHKDKRPNCIILDEIDGAMNAGDSKSAISAIQR 381
Query: 397 MVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKV 456
M +A + K N +K L RP+ICICND YAP LR LR+IAK+
Sbjct: 382 MATAPYPPSRQKSN------------QKNESSHPLSRPLICICNDQYAPVLRPLRKIAKI 429
Query: 457 HVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILN 516
+ PS+ R+V+RLK+I E + +S AL +CDIR CLN LQ K K +
Sbjct: 430 FLLHPPSLQRLVARLKYISRLEGLTINSGALGAFCRRNQCDIRHCLNALQIRHKTKGRES 489
Query: 517 VMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSN----EFDFLHSLIS 572
+ S V K+++ F + IF T + S SN F+ ++
Sbjct: 490 NQHLSSDVSNSKEINHDLFMTMQAIFHTSHTTHGNCNADQESKSSNGKLSSFNHVYQTAL 549
Query: 573 NRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPP 632
+ G++ ++ + ENI + Y+DP M KT D +G +D+ + + QQ L +Y P
Sbjct: 550 SYGNWPMLLTSLEENISWMMYNDPTMHKTCFAFDWIGMADIWNSQAYQEQQFQLMMYIPF 609
Query: 633 LAITVHRLVSQIQKPNLEWPKS-----YQRYR-----NAFMEKMDIFKSWHSKIPPYISR 682
A+ +H + S + +P++ QR + AF+EK+ W
Sbjct: 610 AAVALHSVCSSTTSSRIVYPRASFDVLIQREKTKNITGAFVEKIGHRLPW---------L 660
Query: 683 HLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKND---LAQLVSAMVSYSLTYKNT 739
ST L+ D I +L +LSP +AL+ S + + + +L+ M+ L+Y++
Sbjct: 661 RASTGWLMVDVIPWILRVLSP----DIALNSTSYRTNSKNPAMERLIEIMIYLGLSYRHQ 716
Query: 740 KSDPLLNNLGNEVSHDVSTLSFDPPINEFITFK----GYRSNHYVLALAVKQVLVHEVE 794
+ + + +P ++E F G R+ H +L LA+++++ EVE
Sbjct: 717 ST----------LRDEQDNFILEPALHELGVFGKDSDGNRAYHIILPLALRKIVGREVE 765
>gi|363739389|ref|XP_414833.3| PREDICTED: LOW QUALITY PROTEIN: chromosome transmission fidelity
protein 18 homolog [Gallus gallus]
Length = 951
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 268/882 (30%), Positives = 404/882 (45%), Gaps = 143/882 (16%)
Query: 114 IDGDCLPVTAPSGGDRVYVKI----SSSGVEERVKKLDVRAHSN--SLTSEPIDVLLQKV 167
I GD + VT+ S G RV++ + S G+E R D + L P L ++V
Sbjct: 164 ILGDYINVTS-SEGTRVFMAVRDDSSHIGIELR----DSVGWNRPLHLLGVPFSYLKEQV 218
Query: 168 EQEAFNKA----------LNSSSEG------QSDRSLPEKPVVHEQLWVDKYAPNSFTEL 211
+E +A +NS SE Q + E+P H LWVDK+AP + EL
Sbjct: 219 YEEHRRRAVEASQQLTETINSCSETSDEATEQPGDTGEEEPTPH-CLWVDKFAPRRYIEL 277
Query: 212 LSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRG 271
LSD+ TNR +L WLK WD+ VFG E ++ H Q+K+Q
Sbjct: 278 LSDDYTNRCLLKWLKLWDTVVFGKE--KPVKKAKPGAEAHPXFRQHKEQQ---------- 325
Query: 272 NRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVA 331
N+W LE E HK+ P+ KV LLCGPPGLGKTTLAHV
Sbjct: 326 NKWKTKAQLTEEILEAELDQ--------HKR------PKYKVALLCGPPGLGKTTLAHVI 371
Query: 332 AKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM-ADSRPKCLVIDEIDGALGDGKGA 390
A+H GY+VVE+NASDDRS T +I QM SV+ A+ +P CL+IDEIDGA +
Sbjct: 372 ARHAGYNVVEMNASDDRSPETFRIRIEAATQMKSVLGAEEKPNCLIIDEIDGA---PTAS 428
Query: 391 VEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSL 450
+ V+L +++ S + VA +++ + + LLRPVICICND Y PALR L
Sbjct: 429 ITVLLNIIN----SKEPEGEVAA-----SGGRRRRREGSLLLRPVICICNDQYVPALRPL 479
Query: 451 RQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFL-D 509
RQ A + F Q + SR+ RL I + M+ AL L + E DIRSC+NTLQFL
Sbjct: 480 RQQAFLLSFPQTAPSRLAQRLGEIAQQQGMRADMGALLALCKKAENDIRSCINTLQFLHS 539
Query: 510 KKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKR-------------------- 549
+ ++ L+V + + +G KD ++ F IW+EIFQ + +R
Sbjct: 540 RGQKELDVRVVQTMKIGLKDQNKGLFSIWQEIFQLPRVQRHHIGMDPSLPNHLLADEDEM 599
Query: 550 ----LRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCL 605
+R ++++S S+ F + L S+ G+ + + G++EN L ++ D L
Sbjct: 600 SHLGVRTALTAS---SHRFHRVLHLASSSGEQEKLAQGLYENFLNMKLRDSSFSSVCLAL 656
Query: 606 DCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEK 665
+ L SD++ + ++ Q L Y P L + H L + P L +P S+
Sbjct: 657 EWLCFSDMLGRAVLHGQSFQLMRYLPFLPVAFHMLFAATSIPRLSYPSSHHEALAKLNHM 716
Query: 666 MDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQL 725
++ S S I P +SLV + + LL I++ P LRPV L S KEK LA L
Sbjct: 717 QNLMVSMVSGITPSARSRAGQQSLVLEVLCLLLDIIA-PKLRPVNTQLYSLKEKQQLAAL 775
Query: 726 VSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLALAV 785
+S M++Y+LTY + + DP + + F + L
Sbjct: 776 ISTMLAYNLTYHQER-----------LPEGQYVYKLDPNVEDVCRFPDLPARKQ-LTYQA 823
Query: 786 KQVLVHEVEKQRIMQV-TIGKSEHLADGYKENMDLAGEEDSKTESAKTNNAAVSAKLIEK 844
KQ++ HE+E +++ + + ++ +L + E M++ E +N + I K
Sbjct: 824 KQLIAHEIEMEKMRRTEAVLQARNLNE---EPMEMGDVEMKAGGPPVPHNHQQRLEHIVK 880
Query: 845 SKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDRFRKLSGKV 904
++ Q P T + +S+ A + + D GK
Sbjct: 881 RAAV----QDKPETDFFGRPIQRQQSAPA-------------LEAQPAEHDAIEHQMGKA 923
Query: 905 SQDNDNAVQKATVERDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
+D + F+FNEG +NAV+R + +RD L
Sbjct: 924 VGRSD--------------VWFRFNEGVSNAVRRNLYIRDLL 951
>gi|345802036|ref|XP_547205.3| PREDICTED: LOW QUALITY PROTEIN: chromosome transmission fidelity
protein 18 homolog [Canis lupus familiaris]
Length = 1017
Score = 308 bits (789), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 230/783 (29%), Positives = 359/783 (45%), Gaps = 109/783 (13%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LWVD++AP +TELLSD+ TNR +L WLK WD VFG E + R +++
Sbjct: 310 LWVDEFAPQYYTELLSDDFTNRCLLKWLKLWDPVVFGRERPARKP------RPSMDLARG 363
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
K+ +S ++W S+ + ++D + P QKV LLC
Sbjct: 364 GKEATTS-------SKW--------------KSHEQVLEDMLEADLDPSRRPRQKVALLC 402
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM-ADSRPKCLV 376
GPPGLGKTTLAHV A+H GY VVE+NASDDRS I QM SV+ A +P CLV
Sbjct: 403 GPPGLGKTTLAHVIARHAGYSVVEMNASDDRSPEAFRTCIEAATQMESVLGAGGKPNCLV 462
Query: 377 IDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVI 436
IDEIDGA A+ V+L ++ +RK E+ P ++ L+RP+I
Sbjct: 463 IDEIDGA---PVAAINVLLNVL--DRKGPQDAES-GGPGVPTSGGRRHRADGGLLMRPII 516
Query: 437 CICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTEC 496
CICND + P+LR LRQ A + F SR+ RL+ I + M+ AL L E T+
Sbjct: 517 CICNDQFVPSLRQLRQQAFLLHFPPILSSRLTQRLQEISLRQGMQADPGALAALCEKTDN 576
Query: 497 DIRSCLNTLQFL-DKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVS 555
DIR+C+NTLQFL + + L+V + + VG KD + F +W+EIFQ + +R R +
Sbjct: 577 DIRACINTLQFLHGRGRRELSVRAVQTTRVGLKDQRKGLFSVWQEIFQLPRAQRQRWAQD 636
Query: 556 SSSN---------------------VSNEFDFLHSLI---SNRGDYDVIFDGIHENILQL 591
SS ++ LH ++ ++ G+++ + G+ +N L+L
Sbjct: 637 PSSAPHMLLLGDAHLGPGPRAAEAPLTTAAQRLHRILHVAASAGEHEKVVQGLFDNFLRL 696
Query: 592 QYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEW 651
+ D + LD L DL+ Q L Y P L H L + P + +
Sbjct: 697 RLRDSSLGTVCTALDWLAFDDLLTCTAHHGQSFQLLRYLPFLPAAFHLLFASSHVPRIAF 756
Query: 652 PKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVAL 711
P S Q ++ ++ + + I P + ++L+ D++ +L IL+ P LRPV+
Sbjct: 757 PSSQQEAQSRTSRTQNLIHTLVAGIAPATRSRATPQALILDALCLILDILA-PKLRPVST 815
Query: 712 HLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITF 771
L S +EK LA LV M++YSLTY+ + +P + E F
Sbjct: 816 QLYSTREKQQLASLVGTMLAYSLTYRQERR-----------PDGQYIYRLEPNVEEVCRF 864
Query: 772 KGYRSNHYVLALAVKQVLVHEVEKQRIMQVT----IGKSEHL---ADGYKENMDLAGEED 824
+ L KQ++ HE+E +++ + +G + G + AGE++
Sbjct: 865 PELPARK-PLTYQAKQLIAHEIEMEKMRRAEALARVGDGPQVDRGPPGATAPLGGAGEKE 923
Query: 825 SKTESAKTNNAAVSAKLIEKS-KSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDT 883
++ ++ + + +E+ K Q + T ++ S +V P++
Sbjct: 924 AQPPTSHSQEEQWLEQRLERILKKAALEEQPERDFFGRVVTKRAAPLSAGAVAPETDVAE 983
Query: 884 KKSFRSSSSFFDRFRKLSGKVSQDNDNAVQKATVERDSLPLLFKFNEGFTNAVKRPVRMR 943
++ R AV ++ V F+F EG +NAV+R V +R
Sbjct: 984 RRIGR----------------------AVGRSDV-------WFRFKEGVSNAVRRRVPVR 1014
Query: 944 DFL 946
D L
Sbjct: 1015 DLL 1017
>gi|348676922|gb|EGZ16739.1| hypothetical protein PHYSODRAFT_300088 [Phytophthora sojae]
Length = 1106
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 202/619 (32%), Positives = 322/619 (52%), Gaps = 87/619 (14%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LW+DKY P SF +LLSDE+TNREVL W+K WD VF ++R +S + N
Sbjct: 230 LWLDKYKPQSFLDLLSDERTNREVLTWIKSWDRFVFPKKLRPNGTLPVSPAK------PN 283
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
N S+ KN+G S E E K P K++LLC
Sbjct: 284 SFGNKFSWAAKNQG----------SGRAESEEDEDKR--------------PFNKIILLC 319
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVI 377
GPPG GKTTLA++ A+H GY+ +EVNASDDR++S + NK++ ++M S+ + +P C+++
Sbjct: 320 GPPGAGKTTLANIVARHAGYNPIEVNASDDRTASVLRNKLISAMEMQSIWGERKPNCIIL 379
Query: 378 DEIDGAL--GDGKGAVEVILKMVSA--ERKSNTAKENVAKEDQPEKISKKKGCKKASLLR 433
DEIDGA+ DGK A+EVIL++ +A +RK AK AK P L R
Sbjct: 380 DEIDGAMNGSDGKSAIEVILEIANAPLQRKKTGAK-TTAKNRHP-------------LTR 425
Query: 434 PVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEY 493
P+ICICNDLYA LR LRQ+AK+ P R+V+RLK+IC +E +K S+ AL L
Sbjct: 426 PLICICNDLYASVLRPLRQMAKIFTLDTPHSQRLVTRLKYICRHEGIKASTGALAALCSS 485
Query: 494 TECDIRSCLNTLQFLDKK-----KEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTK 548
+ DIR CLNTLQF + K+ ++ + + +V +KD F+ +F + ++K
Sbjct: 486 ADNDIRYCLNTLQFQSTQSRRAVKDKSAIVTLTTGLVAQKDHVHGMFEAMDLVFFEARSK 545
Query: 549 RLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCL 608
+ ++ + + + G++ ++ +G+ EN+ ++ ++DP M K + L
Sbjct: 546 SAKGERPATEKI-------EEAVVSLGNFPLLINGLDENVPKMIFNDPTMNKICDVFEWL 598
Query: 609 GNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKS---YQRYRNAFMEK 665
G +D QQ Y P AI H + +E+P++ Q+ R+ E
Sbjct: 599 GLADEYENRARSEQQFVFQAYIPFAAIATHAACCTSSRRRVEYPRAQFELQKKRDR-SEN 657
Query: 666 MDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQL 725
+ + + +++ P + +ST LV D + L+ LS P +R + L + +EK + +L
Sbjct: 658 ILVALAEGAQLQPIL--RMSTNVLVVDVVPWLVASLS-PNIRRINPSLQTKEEKVMIQRL 714
Query: 726 VSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKG------YRSNHY 779
+ M S L++++ K P + S D S +P +NE + F+G Y+S
Sbjct: 715 IELMASLGLSFRH-KYLP-------DGSED---YSLEPALNELVEFRGNDDGAVYQS--- 760
Query: 780 VLALAVKQVLVHEVEKQRI 798
+L L V++++ EVE +++
Sbjct: 761 MLPLTVRKMIAREVELEQM 779
>gi|242009010|ref|XP_002425286.1| Chromosome transmission fidelity protein, putative [Pediculus
humanus corporis]
gi|212509051|gb|EEB12548.1| Chromosome transmission fidelity protein, putative [Pediculus
humanus corporis]
Length = 823
Score = 305 bits (781), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 219/697 (31%), Positives = 331/697 (47%), Gaps = 98/697 (14%)
Query: 127 GDRVYVKI---SSSGVEERVKKLDVRAHSNSLTSEPIDVLLQKVEQEAFNKALNS-SSEG 182
GDR+YVK+ S + + +V +L P VL +E+ LNS + +G
Sbjct: 142 GDRLYVKLKKESDDCGNDTSSQYNVEKGKKNLLKVPCTVLRNIIEESYAESLLNSRTDDG 201
Query: 183 QSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSE 242
Q + + EK + LWV+K+ P ++ +LLSDE NR +L WLK WD VF E +
Sbjct: 202 QGNENEEEKLIDSSDLWVEKFRPKTYFDLLSDEAVNRTLLNWLKMWDKVVFNKEPK---- 257
Query: 243 EVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKK 302
++ H+ K+ND F + +KK
Sbjct: 258 -----IKFHT------KENDFKF--------------------------------NLNKK 274
Query: 303 TRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQ 362
S G P K+ LLCGPPGLGKTTLAH+AA GY+V+EVNASDDRS I +K+ Q
Sbjct: 275 FDSDGRPYYKIALLCGPPGLGKTTLAHIAAVIAGYNVIEVNASDDRSIEAITSKLNSATQ 334
Query: 363 MNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISK 422
M +V +P C++ DEIDGA V+ ILK + +++K T N +K+++ EK K
Sbjct: 335 MQTVTGKKKPNCVIFDEIDGAPSQ---TVDFILKYLGSKQKEKTKDNNNSKKEKNEKTVK 391
Query: 423 KKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKT 482
RPVICICN+LY P+LR+LRQ A V F S ++++ RL IC + +KT
Sbjct: 392 ----------RPVICICNELYTPSLRNLRQKAFVIHFPNTSSTKLIQRLMEICKRQEIKT 441
Query: 483 SSIALTTLAEYTECDIRSCLNTLQFL-DKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEI 541
A++ L + + DIRSC++TL F +KK E D+ V+G KD+ +S F+IWKEI
Sbjct: 442 DLTAISLLCDKAQNDIRSCISTLHFFKNKKGERFKSSDVLKSVLGLKDVQKSVFNIWKEI 501
Query: 542 F----QKR----KTKRLRNSVSSSSNVS------NEFDFLHSLISNRGDYDVIFDGIHEN 587
F QK KT L + SNV + D + + + G+Y+ + DG++EN
Sbjct: 502 FYNPIQKSGIFAKTLSLFSENKPVSNVHYSKEGMDRLDNIVQICQSYGEYERLVDGVYEN 561
Query: 588 ILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKP 647
L+ ++ V L+ DL+ I + Q L Y P L S
Sbjct: 562 FLKSRFSGN-QNSIVTGLEWFCWFDLLDTTIKKKQNYTLMSYLPYCFGAWQLLYSSNGFC 620
Query: 648 NLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLR 707
L +P + R M+ I + P + ++L+ D++ P+++ + P LR
Sbjct: 621 KLNYPSASYENRTKEMKCNQILCDVLRGLNPTLRSFNQKQNLIFDTL-PMINFILNPELR 679
Query: 708 PVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINE 767
PV L + EKN L+ MV ++ Y +S + DP ++E
Sbjct: 680 PVNPALFNEDEKNSFKHLIDVMVEFNFNYIQQRS-----------PDGTYSFQLDPNVDE 728
Query: 768 FITFKGYRSNHYVLALA------VKQVLVHEVEKQRI 798
I F + + L +KQ++ HEVE +++
Sbjct: 729 IIKFSSLTTTNVRRLLPRTHSYNMKQIISHEVEVEKM 765
>gi|340369547|ref|XP_003383309.1| PREDICTED: chromosome transmission fidelity protein 18 homolog
[Amphimedon queenslandica]
Length = 797
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 257/904 (28%), Positives = 406/904 (44%), Gaps = 147/904 (16%)
Query: 66 EPQFDEKRSRIVDNDDEDWLRYSPPPPQARDDARVEVEEKFVSRYASEIDGDCLPVTAPS 125
EP F+E R R + +++ + P PQ++ R+E Y S +D D + V S
Sbjct: 18 EPLFEENRKRYLSDEETE-----PTEPQSKIQ-RIEYTNT-GGAYPS-MDDDIIRVINTS 69
Query: 126 GGDRVYVKISSSGVEERVKKLDVRAHSNSLTSEPIDVLLQKVEQEAFNKALNSSSEGQSD 185
G D +Y+ I + + K + +A + L S P LL VE++ +++ + ++ +
Sbjct: 70 G-DCIYLPIKNE--QHLHNKKNFKALKSQLLSVPFKELLSSVEEKRYSRLMEAADADFIN 126
Query: 186 RSLP---EKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSE 242
K LW DKY+P + +LLSD+ NR +L WLK WD VF
Sbjct: 127 EEYSIDLMKDGSESLLWADKYSPREYIQLLSDDSVNRSLLSWLKLWDETVFSKP------ 180
Query: 243 EVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKK 302
S LR I Q+ K + R R G E + + D+ +
Sbjct: 181 ---SHLRDTVNI-QSGKDPKKTRGRGGERGRGRGGGHVGHKPWEIYDPKTFATNDALDEH 236
Query: 303 TRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQ 362
R P+QK++LLCGPPG+GKTTLAH A+ CGY++VEVNASDDRS+ + +
Sbjct: 237 RR----PKQKIVLLCGPPGIGKTTLAHTVARQCGYNIVEVNASDDRSADVFRKILESSTE 292
Query: 363 MNSVM-ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKIS 421
M SV+ + S+P CL+IDEIDGA A+ V++ +V K P
Sbjct: 293 MQSVLTSSSKPNCLIIDEIDGAPA---AAINVLV--------------DVIKTKNP---- 331
Query: 422 KKKGCKKASLL-RPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
+G K LL RPVICICNDLYA +LR+L+Q+A V ++ +RL +C E +
Sbjct: 332 -TRGKKSRPLLSRPVICICNDLYATSLRTLKQLAVVFTVPITVTGKLANRLMDVCRREGI 390
Query: 481 KTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKE 540
T++ L L E T+ DIR+CLNTLQF+ +K+ +++ + + VG+KD RS WKE
Sbjct: 391 STTTSTLMALCEKTDNDIRTCLNTLQFIHRKRADISLSAVQAMSVGQKDSQRSLLYFWKE 450
Query: 541 IFQKRKTKRLR---------NSVSSSSNVS-NEFDFLHSLISNRGDYDVIFDGIHENILQ 590
+F+ K+ N S+ NV N F + S S+ G+Y+ + G+ EN L
Sbjct: 451 VFKLPSAKKYTYIGSGMSSDNDRRSNENVQFNRFWHILSEASSTGEYERVMQGLFENYLN 510
Query: 591 LQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVS------QI 644
++ DP M + D + + ++ +Q L Y P +++ H + ++
Sbjct: 511 VKIRDPGMAIVAETQDWIMFYQSLSSAMLSSQVFQLMAYMPFVSVVFHFFYAVSVTGYRV 570
Query: 645 QKPNLEWP--KSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILS 702
Q P+ ++ + YQRY + + H P + R + S I LL ++
Sbjct: 571 QYPHTQFENNQKYQRYSQLVSQ---LLVDSH----PLVKRDIDPYSSAVYFIPTLLDVIR 623
Query: 703 PPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFD 762
P LRPV + L + EK+ L+ +V+ M+SY+LTY + T + +
Sbjct: 624 -PNLRPVNIQLYTQSEKSLLSDIVNTMISYNLTY-----------IQERTPDGQYTYNLE 671
Query: 763 PPINEFITFKGYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGE 822
P + + F G L KQ+L E+E ++ +
Sbjct: 672 PDLGDLCQFPGLPQKKQ-LQYGTKQMLAREIEVAKV-----------------------K 707
Query: 823 EDSKTESAKTNNAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGD 882
+K+E+ P+ + + T SS+ S A+ P+
Sbjct: 708 RHAKSEA--------------------------PTVAAPVKTTPSSKLSIAASVPQRKKV 741
Query: 883 TKKSFRSSSSFFDRFRKLSGKVSQDNDNAVQKATVERDSLPLLFKFNEGFTNAVKRPVRM 942
+ F + R ND+ R S + FKFNEGF++A+K+ VRM
Sbjct: 742 ARDFFGRPITKRAREEGEGEAKEAANDS--------RTSAAVWFKFNEGFSDAIKKTVRM 793
Query: 943 RDFL 946
+D L
Sbjct: 794 KDLL 797
>gi|443734929|gb|ELU18785.1| hypothetical protein CAPTEDRAFT_147267 [Capitella teleta]
Length = 732
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 235/793 (29%), Positives = 375/793 (47%), Gaps = 108/793 (13%)
Query: 177 NSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSE 236
N+++E +LP P+ LWV++Y+P ++ +LLSDE TNR +L WLKQW
Sbjct: 25 NNNAEDIVQNNLP--PLEDHSLWVERYSPRNYMDLLSDESTNRTLLRWLKQW-------- 74
Query: 237 IRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQ 296
E V+ R K+N + +++ G + L+ N
Sbjct: 75 -----EYVVHGKEREK--EPKPKENTKTQHQQDGGKAPWVLAAEALSQLDEHNR------ 121
Query: 297 DSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENK 356
P KV LL GPPGLGKTTLAH+ AKH GY+VVE+NASDDRS+ E K
Sbjct: 122 ------------PIHKVALLHGPPGLGKTTLAHIVAKHAGYNVVEMNASDDRSADIFEQK 169
Query: 357 ILDVVQMNSVM-ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKED 415
I QM SV+ +D +P CL+IDEIDGA G + + ++ + N + +
Sbjct: 170 IEAATQMKSVLESDPKPNCLIIDEIDGAPTVGGLSCFISHDVIFTQPAINMLLTVIKGDK 229
Query: 416 QPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHIC 475
+ +K K G L RP+ICICNDLY P+LR+LR +A V F S++ +RL +
Sbjct: 230 KSKKKRKDHGI----LRRPIICICNDLYTPSLRNLRALAFVIKFPLTLASKLANRLLQVS 285
Query: 476 NNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAF 535
+ES++T L +L E T+ DIRSCLNTLQF+ + + L++ + + +G+KD+ +S
Sbjct: 286 KHESLRTDLSTLMSLCEKTDNDIRSCLNTLQFISRTSQELSLKSVNAMSIGQKDVQKSLM 345
Query: 536 DIWKEIF----QKRK------------TKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDV 579
+W+ +F QKRK +K + +++S+ ++ FD + G+++
Sbjct: 346 SVWQNVFQIPKQKRKHYINPYDRDADPSKNQEDMMAASTVQTSRFDAMLHTAQAAGEHEK 405
Query: 580 IFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHR 639
+ G+++N L+ + DP M V+ D L D ++Q I R+Q ++ Y P L + H
Sbjct: 406 VLQGLYDNFLEAKTKDPSMFGVVQAYDWLMFEDEVNQLIARSQDYAMWAYLPFLPVAFHF 465
Query: 640 LVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLH 699
L + L +PK+ + + + + S + + + + ++ + LV D + LL
Sbjct: 466 LFASNSPHKLNYPKTSFEFHSKRTQTEHLLTSLLADVSVDVRKSINLQVLVLDLLPLLLS 525
Query: 700 ILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHD-VST 758
I+ PP LRPV + L SA EK ++ L+ M+++ L+YK EV+ D S
Sbjct: 526 IIQPP-LRPVNIQLYSAAEKKCMSALIETMIAFKLSYK------------QEVTSDGQSN 572
Query: 759 LSFDPPINEFITFKGYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKENMD 818
P +++ F G + + + A KQ++ E++ +R M+ G S H
Sbjct: 573 FILQPNLDDVALFPGLKRSQKQFSYAAKQLIAREIDVER-MRRAEGTSLH-------QRQ 624
Query: 819 LAGEEDSKTESAKTNNAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSS-----RSSTA 873
LA + T T N + + + C TS V LD R S A
Sbjct: 625 LASLQFKSTSGTYTRNGGLRER-----------QSCMHPTSQVHEALDFFGRPIIRKSPA 673
Query: 874 SVKPKSSGDTKKSFRSSSSFFDRFRKLSGKVSQDNDNAVQKATVERDSLPLLFKFNEGFT 933
K+ + + F + DN + V F+F EG+T
Sbjct: 674 EEAVKAGDHSLTCILREGDEYSYFPAI-------KDNNIIGGDV-------WFRFKEGYT 719
Query: 934 NAVKRPVRMRDFL 946
NAV++ VR+ D L
Sbjct: 720 NAVRKTVRISDLL 732
>gi|301769637|ref|XP_002920253.1| PREDICTED: LOW QUALITY PROTEIN: chromosome transmission fidelity
protein 18 homolog [Ailuropoda melanoleuca]
Length = 979
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 236/786 (30%), Positives = 365/786 (46%), Gaps = 121/786 (15%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LWVD++AP S+TELLSD+ TNR +L WLK WD VFG E + R + +++
Sbjct: 278 LWVDEFAPRSYTELLSDDFTNRCLLKWLKLWDLVVFGRERPARKP------RPSAELTRG 331
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
K+ S ++W S+ + ++D + ++ P QKV LLC
Sbjct: 332 GKEAPGS-------SKW--------------KSHEQVLEDMLEAELDASRRPRQKVALLC 370
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM-ADSRPKCLV 376
GPPGLGKTTLAHV A+H GY VVE+NASDDRS I QM SV+ A +P CLV
Sbjct: 371 GPPGLGKTTLAHVIARHAGYCVVEMNASDDRSPEAFRTCIEAATQMESVLGAGGKPNCLV 430
Query: 377 IDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVI 436
IDEIDGA A+ V+L ++ +RK E+ P +++ + L+RPVI
Sbjct: 431 IDEIDGA---PVAAINVLLSIL--DRKGPQHAES-GGPIVPTSAGRRRRAEGGLLMRPVI 484
Query: 437 CICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTEC 496
CICND + P+LR LRQ A + F SR+ RL+ I + M+ AL L E T+
Sbjct: 485 CICNDQFVPSLRQLRQQAFLLHFPPILSSRLTQRLQEISLRQGMRADPGALAALCEKTDN 544
Query: 497 DIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLR----- 551
DIR+C+NTLQ + L+V + + VG KD + F +W+E+FQ + +R R
Sbjct: 545 DIRACINTLQV---GRCELSVRAVQTTRVGLKDQRKGLFSVWQEVFQLPRAQRQRWGQEL 601
Query: 552 ------------------NSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQY 593
+ ++ + + LH + ++ G+++ + G+ +N L+L+
Sbjct: 602 APPPHTLLLGDGHLGPGPRAAEAALTTAXFYHILH-VAASAGEHEKVVQGLFDNFLRLRL 660
Query: 594 HDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPK 653
D + LD L DL+ + Q L Y P L H L + P + +P
Sbjct: 661 RDSSLGTVCTALDWLAFDDLLSRAAHHGQSFQLLRYLPFLPAAFHLLFASSHVPRIAFPS 720
Query: 654 SYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHL 713
S Q +N ++ ++ + + P + ++LV DS+ +L IL+ P LRPV+ L
Sbjct: 721 SQQEAQNRTSRTQNLIQTLVAGVAPTTRSRAAPQALVLDSLCLILDILA-PKLRPVSTQL 779
Query: 714 LSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKG 773
SA+EK LA LV M++YSLTY+ + + +P + E F
Sbjct: 780 YSAREKQQLAGLVGTMLAYSLTYRQER-----------LPDGQYVYRLEPNVEEVCRFPE 828
Query: 774 YRSNHYVLALAVKQVLVHEVEKQRIMQVT----IGKS---EHLADGYKENMDLAGEEDSK 826
+ L KQ++ HE+E +++ + +G S + + G K + AGE+ ++
Sbjct: 829 LPARK-PLTYQAKQLIAHEIEMEKMRRAEALARVGVSSQVDGVPPGAKAPLGGAGEKGAQ 887
Query: 827 TESAKTNNAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKS 886
+++++ RQ +L A+++ K D
Sbjct: 888 PPTSRSHE----------------ERQLERRLERIL--------KGAALEDKPERD---- 919
Query: 887 FRSSSSFFDRFRKLSGKVSQDNDNAVQKATVER------DSLPLLFKFNEGFTNAVKRPV 940
FF R D A + A ER S + F+F EG +NAV+R V
Sbjct: 920 ------FFGRVVIKRAATPSAGDVAPETAAAERRTGTAVGSSDVWFRFKEGVSNAVRRGV 973
Query: 941 RMRDFL 946
+RD L
Sbjct: 974 YVRDLL 979
>gi|198415516|ref|XP_002120609.1| PREDICTED: similar to CTF18, chromosome transmission fidelity
factor 18 homolog [Ciona intestinalis]
Length = 902
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 218/697 (31%), Positives = 332/697 (47%), Gaps = 90/697 (12%)
Query: 119 LPVTAPSGGDRVYVKISSSGVEERVKKLDVRAHSNSLTSEPIDVLLQKVEQEAFNKALNS 178
LP T ++Y K D RA S+ +T E LQ +S
Sbjct: 235 LPYTMAELRQKIYEKFQH----------DARAQSHHITQEVRSQSLQFSNSLTNQILADS 284
Query: 179 SSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIR 238
S+ D + + LWV+K+AP +T LLSDE NR +L WLK WD VFG E
Sbjct: 285 STSTVEDEGIYSGEESLDGLWVNKFAPTRYTHLLSDEGVNRSLLRWLKLWDKVVFGREFH 344
Query: 239 STSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDS 298
KK + + + +++ + +N L+ E D+
Sbjct: 345 P------------------KKPAEEKHPKNEKYEKFNKFKKKETNELDEE-------LDT 379
Query: 299 WHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKIL 358
H+ P+ K LLCGPPGLGKTTLAH+ AKH GYHVVE+NASDDRS+ T + K+
Sbjct: 380 SHR-------PKLKTALLCGPPGLGKTTLAHIIAKHAGYHVVEMNASDDRSAETFKQKLE 432
Query: 359 DVVQMNSVM-ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
QM SV+ +D RP CL+IDEIDGA + A+ V+L + K
Sbjct: 433 QTTQMKSVLGSDQRPNCLIIDEIDGA---PQAAINVLLNAFN-------------KGKLT 476
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
EK K LLRP+ICICNDLY PALR LRQ + + F + + + SRL +C
Sbjct: 477 EKKKTNKKKSSGFLLRPIICICNDLYVPALRQLRQQSYILQFPPTTSAMLASRLSQMCRV 536
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKK-KEILNVMDIGSQVVGRKDMSRSAFD 536
+ M +L L + + DIR+C+NTLQF+ K L + I S +G+KD +S F
Sbjct: 537 QQMDCDLTSLLALCDKSGNDIRTCINTLQFVQSTGKNKLKLETIKSLDIGQKDQHKSIFY 596
Query: 537 IWKEIFQKRKTKRLRNSVSSS-----------SNVSNEFDFLHSLISNRGDYDVIFDGIH 585
+W EIFQ K +R + S + S S+ F + +++S+ G+Y+ G+
Sbjct: 597 VWNEIFQLPKNQRKIDQDSQTVQQRMLEGQKVSQYSSRFYHILNIVSSCGEYEKTLQGVF 656
Query: 586 ENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQ 645
+N L +++ D +L K + L D ++ +I Q+ L Y P L + H L + I
Sbjct: 657 DNFLLMKFKDSGILAINKAYEWLLLQDQINLHISSIQEWVLMRYTPYLFVFFHLLFACIA 716
Query: 646 KPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPT 705
P +++P++ Q R + ++ S + P + + V D + LL I+ P+
Sbjct: 717 PPRIQFPQTEQENRKKLQKSENLLDSMFIDMAPPTRCFTTHVTSVLDLLPHLLAIMM-PS 775
Query: 706 LRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPI 765
RP+ + L SA EK L LV ++++Y+LT+ +++ N +P +
Sbjct: 776 FRPINMQLYSANEKLQLQDLVRSLLAYNLTFIQERNEDGQYN-----------YVLEPNV 824
Query: 766 NEFITF----KGYRSNHYVLALAVKQVLVHEVEKQRI 798
E + +G + L A+KQ++ EVE +R+
Sbjct: 825 AEVCHYLEPQEGAKKQ---LPYAIKQIISKEVETERM 858
>gi|47210930|emb|CAF92729.1| unnamed protein product [Tetraodon nigroviridis]
Length = 724
Score = 299 bits (766), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 239/794 (30%), Positives = 378/794 (47%), Gaps = 125/794 (15%)
Query: 197 QLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQ 256
+LWVD+++P +TELLSD+ TNR +L WLK WD VFG E R+
Sbjct: 12 RLWVDRFSPRHYTELLSDDFTNRCLLKWLKLWDGVVFGRE------------RKARPARP 59
Query: 257 NKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLL 316
+++ S ++ N+ + N F++ + E ++ Q HK+ P+ KV LL
Sbjct: 60 DRQAAGQSSSKPNQAGQNPN-RFKSKVEMTEEILEAELDQ---HKR------PKFKVALL 109
Query: 317 CGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-DSRPKCL 375
GPPGLGKTTLAH+ AKH GY+VVE+NASDDRS+ + +I QM SV+ + +P CL
Sbjct: 110 SGPPGLGKTTLAHIIAKHAGYNVVEINASDDRSAEVFQKRIDTATQMKSVLGVNEKPNCL 169
Query: 376 VIDEIDGALGDGKG--------------------AVEVILKMVSAERKSNTAKENVAKED 415
+IDEIDGA G + L V + N + ++D
Sbjct: 170 IIDEIDGAPTVISGHKSTTHKNNRIKYVNSFSFSLIAFFLPFVVCQAAINILLATLNRKD 229
Query: 416 -----QPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSR 470
E +KKK K++ LLRP+ICICNDLY PALR+LRQ A + F Q SR+ R
Sbjct: 230 GHSGEAAETTTKKKKKKESILLRPIICICNDLYVPALRALRQQAFLLTFPQTQPSRLSQR 289
Query: 471 LKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFL-DKKKEILNVMDIGSQVVGRKD 529
L I + MKT AL +L E T+ DIR+C+NTLQFL + + +++ I VG+KD
Sbjct: 290 LAEISLRQGMKTDMGALMSLCEKTDNDIRACINTLQFLYGRGLKQVDIRTIQGVSVGQKD 349
Query: 530 MSRSAFDIWKEIFQKRKTKRLR---------------NSVSSSSNVSNEFDFLHSLISNR 574
++ F +W+EIFQ +TKR + + S +++ F + L S+
Sbjct: 350 QNKGLFHLWQEIFQLPRTKRYKMRKKLKHKKRIGEGFEAAPGSGSLAQRFHHVFHLASSS 409
Query: 575 GDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLA 634
G+Y+ + G+++N L ++ DP + + LD SD +++ I+ +Q L Y P L+
Sbjct: 410 GEYEKVSQGLYDNYLSMRVRDPNLQNVCEALDWFSFSDRLNREILHSQNFSLMRYLPFLS 469
Query: 635 ITVHRLVSQIQKPNLEWPKSYQRY--RNAFMEKMDIFKSWHSKIPPYISRHLSTESLVED 692
+T H L + P + +P S RNA + S IP I R +++ ++
Sbjct: 470 VTFHLLFAHTHVPRITYPHSQHEVPTRNALSTML-------SDIPACI-RSRTSQHILAL 521
Query: 693 SISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEV 752
+ PLL + P LRPV L S++EK + +LV M++Y+L+Y+ ++
Sbjct: 522 DLLPLLLDIICPKLRPVNPQLFSSREKEQMHELVDTMLAYNLSYRQDRT----------- 570
Query: 753 SHDVSTLSFDPPINEFITFKGYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADG 812
T +P + E + + L KQ + E+E++++ +
Sbjct: 571 PEGQYTYVLEPRVEEVVRYPSLPPRRQ-LTYQAKQTISREMEQEKMRRA----------- 618
Query: 813 YKENMDLAGEEDSKTESAKTNNAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSST 872
E + L +K E KT R P+T+ + +T
Sbjct: 619 --EQLILQRNPAAKQEEKKT-------------------RGPTPTTNHQQRLENIVSRTT 657
Query: 873 ASVKPKSSGDTKKSFRSSSSFFDRFRKLSGKVSQDNDNAVQKATVERDSLPLLFKFNEGF 932
+P + R+ + R + S + + + ++ KA D + F+FNEG
Sbjct: 658 VEARP----EVDFFGRAVAPKPQRAQPSSDRGEKCPNLSMGKAVGNSD---VWFRFNEGM 710
Query: 933 TNAVKRPVRMRDFL 946
+NAV+R V +R+ L
Sbjct: 711 SNAVRRNVYIRELL 724
>gi|330802089|ref|XP_003289053.1| hypothetical protein DICPUDRAFT_153362 [Dictyostelium purpureum]
gi|325080887|gb|EGC34424.1| hypothetical protein DICPUDRAFT_153362 [Dictyostelium purpureum]
Length = 893
Score = 299 bits (765), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 232/709 (32%), Positives = 349/709 (49%), Gaps = 88/709 (12%)
Query: 135 SSSGVEERVKKLDVRAHSNSLTSEPIDVLLQKVEQ-EA--FNKALNSSSEGQSD--RSLP 189
S+SG+ + +KK L +P D +L+++E EA + L SE +S+ S
Sbjct: 80 SNSGINDSIKK-----SYGDLLGKPFDEILKELEDFEAIKYKARLLQESEKKSEINNSNN 134
Query: 190 EKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALR 249
V QLWVDKY+P+SF +LLSD+ N E+L WLK WD VFG +I + V+ +
Sbjct: 135 VNQVKDNQLWVDKYSPSSFHDLLSDDSMNIEILKWLKLWDCVVFGKDI--PKDLVMPSSV 192
Query: 250 RHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRS---- 305
S +S N N NR+ + N N ++++ ++ G Q S ++ S
Sbjct: 193 ATSQLSSNLG------ISTNSANRY-HSQLNNQLNNQFKSKSTIGTQSSTQPQSNSHHHQ 245
Query: 306 ------TGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILD 359
G P KV+LL G PGLGKTTLAHV AK GY+ VE+NAS+DRS E+K+L
Sbjct: 246 QYFLQEDGSPIVKVILLTGGPGLGKTTLAHVLAKAAGYNTVEINASEDRSGEAFESKLLS 305
Query: 360 VVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVA------- 412
++ NS + ++ CL+IDEIDG G G +E+I K++ K+ +K+
Sbjct: 306 TIENNSSVFSNKHNCLIIDEIDGISGRDNGPIELICKLIDNSLKAGASKKTNNTTKKNTN 365
Query: 413 --------------KEDQPEKISKKKGCKKAS---------------LLRPVICICNDLY 443
+D+ E S A+ LLRP+ICICND Y
Sbjct: 366 SNNNNNGDEESESDNDDEDEFYSNDNEGTAANKKKTSTKSKKKKLTRLLRPIICICNDQY 425
Query: 444 APALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLN 503
P+LR LRQ A V F P +++SRLK IC +E++ + L +L + T DIR+C+N
Sbjct: 426 VPSLRKLRQKATVFNFSAPKKQQLLSRLKEICLHENLTANDSTLGSLIDMTGSDIRACIN 485
Query: 504 TLQFLDKKKEILN---VMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNV 560
+LQF+ K +LN + + + V+G+KD+ + F+IW +F+ T + + S+S +
Sbjct: 486 SLQFIKSKTSVLNSDLLKNKSNIVIGQKDIEKGLFEIWNLLFKNPSTNKSSSMYSASQTL 545
Query: 561 --------SNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSD 612
S E+ L+ ++ + D + DG+HEN L D + KTV CLD + SD
Sbjct: 546 LNNKNIGGSQEYQQLNLIVESCNQVDKLMDGVHENFLTNITADYSLDKTVDCLDWMVFSD 605
Query: 613 LMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEK--MDIFK 670
++ + + + Y PLAI HR + P + P S Y N +K I
Sbjct: 606 VLQNHHIGHDEK--YKSIVPLAIH-HRCTTYT--PKVVMPHS--EYDNYIKKKSTSTIKD 658
Query: 671 SWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMV 730
S+ S P + + D + P + ILS P +R L S KEKN+L LV M
Sbjct: 659 SFFSDAPAQVHSSIKKSYFTVDFVYPFIDILSLP-IRVSNTQLYSIKEKNNLNSLVEIMK 717
Query: 731 SYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHY 779
Y +TYK KS N ++ + D +PPI++ +TF+ N Y
Sbjct: 718 YYHITYKLEKSTA--NQYQSKDNKDKMQYKLEPPIDQLLTFQNQPQNKY 764
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 913 QKATVERDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
++AT E + +KF EGFTNA+K+PV ++DFL
Sbjct: 860 KRATSENKGPHIKYKFQEGFTNAIKKPVSVKDFL 893
>gi|432098949|gb|ELK28439.1| Chromosome transmission fidelity protein 18 like protein, partial
[Myotis davidii]
Length = 939
Score = 298 bits (762), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 282/963 (29%), Positives = 440/963 (45%), Gaps = 142/963 (14%)
Query: 36 EPVPPDSLPLEINGHKRPRSDTPKSPIDVDEPQFDEKRSRIVDNDDEDWLRYSPPPPQAR 95
EP PDS P +I P SP +V + E VD + L+ +PP P+
Sbjct: 67 EPPLPDSPPRDIT--------PPPSP-EVPAELWGEG---TVDPGADLGLKGAPPAPRNP 114
Query: 96 DDARVEVEEKFVSRYASEIDGDCLPVTAPSGGDRVYVKISSSGVEERVK-KLDVRAHSNS 154
R V E +V+ +++ D L + A GG V+ S G + R + +LD+ S +
Sbjct: 115 VLRRPPVLEDYVNVTSTDGDRAFLVLRADPGG--TGVQSPSLGTQWRGRGRLDLLGVSFA 172
Query: 155 LTSEPIDV-LLQKVEQEA--FNKALNSSSEGQSDRSLPEKPVVHEQ------LWVDKYAP 205
E +D Q++ +EA ++ L+S + + PE+ H Q LWVD++AP
Sbjct: 173 SLKEQVDSERRQRLLEEAQRLSETLHSLRTEEMEEETPEEVPAHRQEDSQHSLWVDEFAP 232
Query: 206 NSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSF 265
+TELLSD+ TNR +L WLK WD VFG E A + ++ + +++
Sbjct: 233 QHYTELLSDDFTNRCLLKWLKLWDLVVFGRE--------RPARKPRPSVEPARVGKEATT 284
Query: 266 TRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKT 325
+ K W + + LE E S+ P QKV LLCGPPGLGKT
Sbjct: 285 SSK-----WKSHDQVLEELLEAELDLSRR--------------PRQKVALLCGPPGLGKT 325
Query: 326 TLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-DSRPKCLVIDEIDGAL 384
TLAHV A+H GY VVE+NASDDRS I QM SV+ +P CLVIDEIDGA
Sbjct: 326 TLAHVIARHAGYCVVEMNASDDRSPEAFRTHIEAATQMESVLGIGGKPNCLVIDEIDGAP 385
Query: 385 GDG---------KGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPV 435
G + A+ V+L ++ +RK E + + ++ + L+RPV
Sbjct: 386 TVGLLGAWPVGKQAAINVLLSII--DRKGPKEAELGGRATLAGE-GRRPRAEGGLLMRPV 442
Query: 436 ICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTE 495
ICICND +AP+LR L+Q A + F SR++ RL+ I + ++ AL L E T+
Sbjct: 443 ICICNDQFAPSLRQLKQQAFLLHFPPTLPSRLIQRLQEISLRQGLQADPGALAALCEKTD 502
Query: 496 CDIRSCLNTLQFL-DKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLR--- 551
DIR+C+NTLQFL + + L+V + + VG KD + F +W+E+FQ + +R R
Sbjct: 503 NDIRACINTLQFLHGRGQRELSVQAVQTTRVGLKDQRKGLFSVWQEVFQLPRAQRRRVGQ 562
Query: 552 ---------------------NSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQ 590
+ + + + F + + ++ G+++ + G+ +N L+
Sbjct: 563 DPTLPTHTLLLGDGLTGLGHRAAEAPLTMAAQRFYHILHVAASSGEHEKVVQGLFDNFLR 622
Query: 591 LQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLE 650
L+ D + LD L D++ Q +Q L YQP L + H L + P +
Sbjct: 623 LRLRDSSLGTVCTALDWLAFEDMLGQAAHHSQSFQLLRYQPFLLVAFHLLFASSHVPRIA 682
Query: 651 WPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVA 710
+P S Q +N + ++ ++ S I P + ++LV D++ PLL IL P LRPV+
Sbjct: 683 FPSSQQEAQNRTSQVQNLIQTLVSGIAPATRSQTAPQALVLDTLCPLLDILV-PKLRPVS 741
Query: 711 LHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFIT 770
L S +EK L+ LV M++YSLTY+ ++ G V +P + E
Sbjct: 742 TQLYSTREKLQLSSLVGTMLAYSLTYRQERTPD-----GQYVYR------LEPNLEEVCR 790
Query: 771 FKGYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLA-DGYKENMDLAGEEDSKTES 829
F + L KQ++ E+E +++ ++E LA DG + D
Sbjct: 791 FPELPARK-PLTYQAKQLIAREIEMEKMR-----RAEALARDGDSPQV------DGSPPK 838
Query: 830 AKTNNAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRS 889
AK A K + P R +L A+++ ++ D
Sbjct: 839 AKGPQGAAGGKGAQP----PTPRSHEQRLERIL--------KRAALEDQTERD------- 879
Query: 890 SSSFFDRFR-KLSGKVSQDN-----DNAVQKATVERDSLPLLFKFNEGFTNAVKRPVRMR 943
FF R + + +S +N D Q+ + F+F EG +NAV+R + +R
Sbjct: 880 ---FFGRVVIRRAAALSAENTAPEMDAIEQRMGTAVGRSDVWFRFKEGVSNAVRRSLHIR 936
Query: 944 DFL 946
D L
Sbjct: 937 DLL 939
>gi|395515692|ref|XP_003762034.1| PREDICTED: chromosome transmission fidelity protein 18 homolog
[Sarcophilus harrisii]
Length = 1025
Score = 298 bits (762), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 277/973 (28%), Positives = 416/973 (42%), Gaps = 157/973 (16%)
Query: 36 EPVPPDSLPLEINGHKRPRSDTPKSPIDVDEPQFDEKRSRIVDND-----DEDWLRYSPP 90
EP+ PDS P +I P SP D E + +++D D +L+ +P
Sbjct: 148 EPIYPDSPPKDIT--------PPLSPEDHQEAWNNRDLDKLLDQGPLDISDVGFLQMTPS 199
Query: 91 PPQARDDARVEVEEKFVSRYASEIDGDCLPVTAPSGGDRVYVKISSS--GVEERVKKLDV 148
P R+ + + Y + D G RVY+ + GV ++ + D
Sbjct: 200 P--CRNKKLILKRPPVLEEYINVTSTD---------GTRVYMAVKDDPLGVGVKLSQCDA 248
Query: 149 --RAHSN-SLTSEPIDVLLQKVEQE----------AFNKALNSSSEGQS---------DR 186
R H L P L ++V+ E + LNS EG++ R
Sbjct: 249 AWRGHGQLHLLGMPFSYLKEQVDDERRRKVLEASQKLTEMLNSEPEGETPEMGDGVSRAR 308
Query: 187 SLPEKPVVHEQ------LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRST 240
+ E+ Q LWVD + P + ELLSD+ TNR +L WLK WD VFG E
Sbjct: 309 GMEEEEEKENQDSSQHSLWVDLFTPRHYRELLSDDYTNRCLLKWLKLWDVVVFGRE---- 364
Query: 241 SEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWH 300
+++ K N + + G ++ + + + +++
Sbjct: 365 ------------KVAKKPKLNSEQPS--------ARGPSKHGREPQKWKTKEQIMEEILD 404
Query: 301 KKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDV 360
+ P+ KV LLCGPPGLGKTTLAHV AKH GY VVE+NASDDRS + +I
Sbjct: 405 AELDQNNRPKFKVALLCGPPGLGKTTLAHVIAKHAGYSVVEMNASDDRSPEVFKTRIEAA 464
Query: 361 VQMNSVM-ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEK 419
QM SV+ A +P CL+IDEIDGA ++ V+L ++ N +
Sbjct: 465 TQMESVLGAKGKPNCLIIDEIDGA---PTPSINVLLSII------NRKDVGETETTGTAG 515
Query: 420 ISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNES 479
KK+ + LLRP+ICICND Y P+LR L+Q A + F Q SR+V RL I +
Sbjct: 516 GGKKRKKEGGLLLRPIICICNDQYTPSLRQLKQQAFLLQFPQTLPSRLVQRLNEISLRQG 575
Query: 480 MKTSSIALTTLAEYTECDIRSCLNTLQFL--DKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
MK + L L E TE DIRSC+NTLQFL +KE+ + M + + +G KD + F I
Sbjct: 576 MKADTGTLMMLCEKTENDIRSCINTLQFLYGQGQKELSSRM-VQTMSIGLKDQKKGLFSI 634
Query: 538 WKEIFQKRKTKRL----------------------RNSVSSSSNVSNEFDFLHSLISNRG 575
W+EIFQ K +R R + SS S F + + ++ G
Sbjct: 635 WQEIFQLPKIQRQRIGQDVFLPHQTLLDGDSGPLGRGPLHSS---SQRFHHILHITTSTG 691
Query: 576 DYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAI 635
D++ + G+++N L ++ DP + +D L D++ Q + Q L Y P L +
Sbjct: 692 DHEKVAQGLYDNFLNMKLKDPTLNSVCAAMDWLIFEDILDQTVRHGQNFQLMRYLPFLPV 751
Query: 636 TVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSIS 695
H L + P + +P S N + ++ S S + P +SL+ +++
Sbjct: 752 AFHLLFAANSIPRISYPNSQHEALNKMNQTQNLIMSLVSGVTPAARSRAGPQSLILEALC 811
Query: 696 PLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHD 755
LL I+S P LRPV+ L S KEK LA L++ M++Y+LTY ++
Sbjct: 812 LLLDIIS-PKLRPVSTQLYSNKEKQQLANLINIMLAYNLTYHQERT-----------PDG 859
Query: 756 VSTLSFDPPINEFITFKGYRSNHYVLALAVKQVLVHEV--EKQRIMQVTIGKSEHLADGY 813
+ T DP I E F + L KQ++ E+ EK R + +I + G
Sbjct: 860 MYTYKLDPNIEEVCRFPDLPARKQ-LTYQTKQLIAREIDLEKMRRAEASI---QARYGGP 915
Query: 814 KENMDLAGEEDSKTESAKTNNAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTA 873
+D E S + S + E+ R+ T D
Sbjct: 916 VSRLDTTNPESMWVNSGEKGTPVASIRNHEQRLEHIMKRK---------TIFDEKPERDF 966
Query: 874 SVKPKSSGDTKKSFRSSSSFFDRFRKLSGKVSQDNDNAVQKATVERDSLPLLFKFNEGFT 933
+ S + D + GK AV K+ V F+FNEG +
Sbjct: 967 FGREIVRKVVTPSQETQGPERDSLERRMGK-------AVGKSDV-------WFRFNEGVS 1012
Query: 934 NAVKRPVRMRDFL 946
NAV+R + ++D L
Sbjct: 1013 NAVRRNLYIKDLL 1025
>gi|158299494|ref|XP_319609.4| AGAP008869-PA [Anopheles gambiae str. PEST]
gi|157013545|gb|EAA14898.4| AGAP008869-PA [Anopheles gambiae str. PEST]
Length = 999
Score = 296 bits (758), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 235/778 (30%), Positives = 353/778 (45%), Gaps = 118/778 (15%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LWV+KY P + +LLSDE TNR +L WLK WD VFG E
Sbjct: 311 LWVEKYRPRRYIDLLSDETTNRSLLQWLKLWDKAVFGRE-------------------PV 351
Query: 258 KKQND-----SSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRST------ 306
KKQ D S+F +K G SNG + KG +K RST
Sbjct: 352 KKQKDPKTQLSNFNKKT-GRFESNGGW------------VKGA-----RKARSTLNTELD 393
Query: 307 --GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMN 364
G P QKV LL GPPGLGKTTLAH A+H GY V EVNASDDRS + + QM
Sbjct: 394 EHGCPVQKVALLAGPPGLGKTTLAHTIARHAGYAVREVNASDDRSPDAFRLVLENGTQMK 453
Query: 365 SVM-ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKK 423
SV+ + RP C+V+DEIDGA A+E +L+ ++ + A +K + K
Sbjct: 454 SVLNEERRPNCIVLDEIDGA---PVAAIEFLLRFIAGNVGAAKAAGAAGSGGGVKK-TGK 509
Query: 424 KGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTS 483
K L RP+ICICND+YAPALR LRQ+A V F R+ RL I E +KT
Sbjct: 510 AARDKFVLKRPIICICNDMYAPALRQLRQVAYVVNFPPTEGVRLAERLLVIAKKERIKTD 569
Query: 484 SIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQ 543
++ LAE T D+R+CL+ LQF + + + D+ VG+KD + F IW IFQ
Sbjct: 570 LTSMLALAEKTGNDVRACLSMLQFFACANKPIRLTDVLKCNVGQKDRHKGLFSIWSSIFQ 629
Query: 544 KRKTKRLRNSVSSSSNV-----------SNEFDFLHSLISNRGDYDVIFDGIHENILQLQ 592
++ K+ +V +++ V S + ++ GDY+ + G++EN L +
Sbjct: 630 IQRPKKT-ITVDANATVTEMVTLTDMSASTRMSTVLQVVQMAGDYERLTQGVYENYLHQK 688
Query: 593 YHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWP 652
D M + + +D + + I + Q +Y Y + H L + + P + +P
Sbjct: 689 MPDADMCGVAEATEWFSFNDRLQRAINQLQNYAIYPYLAYAFVMWHYLFATLAWPKINFP 748
Query: 653 -KSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVAL 711
K Y+ + K+ I + ++ +++ D+I P+L + PTLR V+L
Sbjct: 749 SKGYEHSQKLASTKL-IMTGLRKGLSAHLKGIGEGAAVLIDTI-PMLKRVINPTLRSVSL 806
Query: 712 HLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITF 771
LLS KEK+DL V M + L Y K+ +P +++ +F
Sbjct: 807 QLLSQKEKSDLTHTVEVMADFGLNYIQLKT-----------PEGTYQYQLNPDLDQLCSF 855
Query: 772 KGYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGK-SEHLADGYKENMDLAGEEDSKTESA 830
G + KQ++ EVE +++ + E LA+G+ + E + +S
Sbjct: 856 GGAATGQTSTYFG-KQIVSREVELEQMRRAQPKMLEESLANGWHK------ENAAPEQSG 908
Query: 831 KTNNAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSS 890
+ + EKS +P L TL KPK K S
Sbjct: 909 RKDREGGRGTAGEKS---------SPELPNHLRTL----------KPKQIVQKTKQV-VS 948
Query: 891 SSFFDRF--RKLSGKVSQDNDNAVQKATVERDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
FF R ++ + V + +A+ K+ P+ +++ EGF NAV++ V ++D +
Sbjct: 949 KDFFGRICTKETALSVKEGGTDAIVKS-------PIWYRYKEGFNNAVRKDVTLQDLM 999
>gi|395835681|ref|XP_003790803.1| PREDICTED: chromosome transmission fidelity protein 18 homolog
[Otolemur garnettii]
Length = 971
Score = 295 bits (756), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 238/776 (30%), Positives = 359/776 (46%), Gaps = 103/776 (13%)
Query: 194 VHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHST 253
V + LWVD++AP +TELLSD+ TNR +L WLK WD VFG E + R+
Sbjct: 276 VQQCLWVDEFAPQHYTELLSDDFTNRCLLKWLKLWDLVVFGHE---------RSARKPRP 326
Query: 254 ISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKV 313
+Q + N + +W S+ + +++ + S+ P QKV
Sbjct: 327 SAQPARVNKEA----TASGKW--------------KSHEQVVEEMLEAELDSSQRPRQKV 368
Query: 314 LLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM-ADSRP 372
LLCGPPGLGKTTLAHV A+H GY VVE+NASDDRS I QM SV+ A RP
Sbjct: 369 ALLCGPPGLGKTTLAHVIARHAGYSVVEMNASDDRSPEAFRIHIEAATQMESVLGASGRP 428
Query: 373 KCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLL 432
CLVIDEIDGA A+ V+L +++ A P ++ +A L+
Sbjct: 429 NCLVIDEIDGA---PTAAINVLLSVLNCRGPQEAESRGPAV---PLGGGRRGQADRALLM 482
Query: 433 RPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAE 492
RP+ICICND YAP+LR L+Q A + F SR+V RL+ I + M+ AL L E
Sbjct: 483 RPIICICNDQYAPSLRQLKQQAFLLHFPPTLPSRLVQRLQEISLRQGMQADPGALAALCE 542
Query: 493 YTECDIRSCLNTLQFLDKKKEI-LNVMDIGSQVVGRKDMSRSAFDIWKEIFQ-KRKTKRL 550
+ DIR+C+NTLQFL ++ + L++ D+ + VG KD + F +W+E+FQ R +RL
Sbjct: 543 KADNDIRACINTLQFLYRRGQRELSMRDVQTTRVGLKDQRKGLFSVWQEVFQLPRAQRRL 602
Query: 551 ---------------RNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHD 595
V S + S F + + ++ G+++ + G+ +N L+L+ D
Sbjct: 603 MGQGQDLFTHMLLLNHGDVGSLTTASQRFYHVLHVATSAGEHEKVVQGLFDNFLRLRLRD 662
Query: 596 PVMLKTVKC-LDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKS 654
L TV C LD L DL+ Q +Q L Y P L H L + + +P S
Sbjct: 663 -SSLGTVCCALDWLAFDDLLAQAAHHSQSFQLLRYLPFLPAAFHVLFASSHVARITFPSS 721
Query: 655 YQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLL 714
Q +N + ++ ++ S + P +R + + LL + P LRPV+ L
Sbjct: 722 QQEAQNRISQTRNLIQTLVSGMTP-ATRSRAVPQALVLDALCLLLDILAPKLRPVSTQLY 780
Query: 715 SAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGY 774
SA+EK LA LV M++YSLTY+ ++ G V +P + + F
Sbjct: 781 SAREKQQLASLVGTMLAYSLTYRQERTPD-----GQYV------YKLEPNVEDVCRFPEL 829
Query: 775 RSNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTNN 834
H L KQ++ E+E +++ ++E +A G G S
Sbjct: 830 -PTHKPLTYQAKQLIAREIEVEKMR-----RAEAVARG--------GNSPQVDRSPPGPE 875
Query: 835 AAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFF 894
+ + K L C P+ L+ + +P+ FF
Sbjct: 876 GLLEGSV---GKDL-----CQPTLPNHKQRLEHIMRTAREEQPE------------RDFF 915
Query: 895 DR--FRKLSGKVSQD--NDNAVQKATVERDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
R R ++ + D D ++ + + F+FNEG +NAV+R + +RD L
Sbjct: 916 GRVIIRSVAAPRAGDMEKDAVERRIGIAAGRSEVWFRFNEGVSNAVRRSLYIRDLL 971
>gi|390471048|ref|XP_003734424.1| PREDICTED: LOW QUALITY PROTEIN: chromosome transmission fidelity
protein 18 homolog [Callithrix jacchus]
Length = 1089
Score = 295 bits (755), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 236/795 (29%), Positives = 363/795 (45%), Gaps = 96/795 (12%)
Query: 176 LNSSSEGQSDRSLPEKPVVHEQ------LWVDKYAPNSFTELLSDEQTNREVLLWLKQWD 229
L S E PE+ + Q LWVD++AP +TELLSD+ TNR +L WLK WD
Sbjct: 367 LRSEEEAAQPVGAPEEELAAGQDTSPHCLWVDEFAPQHYTELLSDDFTNRCLLKWLKLWD 426
Query: 230 SCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYEN 289
VFG E A + ++ + +++ K W S+ E
Sbjct: 427 LVVFGHE--------RPARKPRPSVEPARASKEATAPVK-----W------KSHEQVLEE 467
Query: 290 SNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRS 349
G+ S P KV LLCGPPGLGKTTLAHV A+H GY VVE+NASDDRS
Sbjct: 468 VLEAGLDPSQR--------PRHKVALLCGPPGLGKTTLAHVIARHAGYSVVEMNASDDRS 519
Query: 350 SSTIENKILDVVQMNSVM-ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAK 408
+I QM SV+ A +P CLVIDEIDGA A+ V+L +V+ + +
Sbjct: 520 PEIFRTRIEAATQMESVLGASGKPNCLVIDEIDGA---PMAAINVLLSIVN---RKGPRE 573
Query: 409 ENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVV 468
+ + P +++ + A L+RP+ICICND ++P+LR L+Q A + F SR+V
Sbjct: 574 AELQGQAMPLSGGRRRRAEGALLMRPIICICNDQFSPSLRQLKQQALLLHFPPTLPSRLV 633
Query: 469 SRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFL-DKKKEILNVMDIGSQVVGR 527
RL+ + +K L L E T+ DIR+C+NTLQFL + + L+V D+ + VG
Sbjct: 634 QRLQEVSLRRGLKADPGVLAALCEKTDNDIRACINTLQFLHSRGQRELSVRDVRATRVGV 693
Query: 528 KDMSRSAFDIWKEIFQKRKTKRLRNS----------------VSSSSNVSNEFDFLHSLI 571
KD R F +W+E+FQ + +R R S V S ++ S F +
Sbjct: 694 KDQRRGLFSVWQEVFQLPRAQRRRVSQDPALPTDTLLLGDGDVGSLTSASQRFYHVLHAA 753
Query: 572 SNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQP 631
++ G+++ + G+ +N L+L+ D + LD L DL+ + +Q L Y P
Sbjct: 754 ASAGEHEKVVQGLFDNFLRLRLRDSSLDAVCVALDWLAFDDLLARAAHHSQSFQLLRYPP 813
Query: 632 PLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVE 691
L + H L + P + +P S Q +N + ++ ++ S I P +R +T +
Sbjct: 814 FLPVAFHVLFASSHTPRITFPSSQQEAQNRMSQMRNLIQTLVSGIVP-ATRSRATPQALL 872
Query: 692 DSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNE 751
LL + P LRPV+ L S +EK LA LV M++YSLTY ++ G
Sbjct: 873 LDALCLLLDILTPKLRPVSTQLYSVREKQQLASLVGTMLAYSLTYCQERTPD-----GQY 927
Query: 752 VSHDVSTLSFDPPINEFITFKGYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLAD 811
V +P + E F + L KQ++ E+E +++ +
Sbjct: 928 V------YRLEPNVEELCRFPELPARK-PLTYQAKQLIAREIEVEKMRRA---------- 970
Query: 812 GYKENMDLAGEEDSKTESAKTNNAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSS 871
E AG + + + + EK P R ++ R +
Sbjct: 971 ---EASAQAG-NSPQVDGSPPGLKGLLGGSGEKGVRRPAPRNHEQRLEHIM------RRA 1020
Query: 872 TASVKPKSSGDTKKSFRSSSSFFDRFRKLSGKVSQDNDNAVQKATVERDSLPLLFKFNEG 931
+P+ + RS ++ +G + + D+A ++ + F+FNEG
Sbjct: 1021 APEEQPERDFFGRVVVRSVAA------PSAGDTAPEQDSAERRMGTAVGRSEVWFRFNEG 1074
Query: 932 FTNAVKRPVRMRDFL 946
+NAV+R V +RD L
Sbjct: 1075 VSNAVRRSVYIRDLL 1089
>gi|402907182|ref|XP_003916357.1| PREDICTED: chromosome transmission fidelity protein 18 homolog
[Papio anubis]
Length = 909
Score = 295 bits (755), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 233/775 (30%), Positives = 356/775 (45%), Gaps = 106/775 (13%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LWVD++AP +TELLSD+ TNR +L WLK WD VFG E S
Sbjct: 215 LWVDEFAPRHYTELLSDDFTNRCLLKWLKLWDLVVFGHERPS------------------ 256
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
+K S + + G +++ + E G+ S P QKV LLC
Sbjct: 257 RKPRPSVEPARVSKEATAPGKWKSHEQV-LEEMLEAGLDPSQR--------PRQKVALLC 307
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM-ADSRPKCLV 376
GPPGLGKTTLAHV A+H GY VVE+NASDDRS +I QM SV+ A +P CLV
Sbjct: 308 GPPGLGKTTLAHVIARHAGYSVVEMNASDDRSPEAFRTRIEAATQMESVLGAGGKPNCLV 367
Query: 377 IDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVI 436
IDEIDGA A+ V+L +++ + + A P +++ + L+RP+I
Sbjct: 368 IDEIDGA---PVAAINVLLSILNRKGPQEVEPQGPAV---PSGGGRRRRAEGGLLMRPII 421
Query: 437 CICNDLYAPALRSLRQIAKVHVFIQPSV-SRVVSRLKHICNNESMKTSSIALTTLAEYTE 495
CICND +AP+LR L+Q A + + + P++ SR+V RL+ +C + M+T L L E T+
Sbjct: 422 CICNDQFAPSLRQLKQQAFL-LHLPPTLPSRLVQRLQEVCLRQGMRTDPGVLAALCEKTD 480
Query: 496 CDIRSCLNTLQFL-DKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLR--- 551
DIR+C+NTLQFL + + L+V D+ + VG KD R F +W+E+FQ + +R R
Sbjct: 481 NDIRACINTLQFLYSRGQRELSVRDVQATRVGLKDQHRGLFSVWQEVFQLPRAQRRRVGQ 540
Query: 552 -------------NSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVM 598
S ++ S F + ++ G+++ + G+ +N L+L+ D +
Sbjct: 541 DPALPADTLLLGDGDAGSLTSASQRFYRVLHAAASAGEHEKVVQGLFDNFLRLRLRDSSL 600
Query: 599 LKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRY 658
LD L DL+ +Q L Y P L + H L + P + +P S Q
Sbjct: 601 GAVCAALDWLAFDDLLAGAAHHSQSFQLLRYPPFLPVAFHVLFASSHTPRITFPSSQQEA 660
Query: 659 RNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKE 718
+N + ++ ++ S I P +R +T + LL + P LRPV+ L S +E
Sbjct: 661 QNRMSQMRNLMQTLVSGIAP-AARSRATPQALLLDALCLLLDILAPKLRPVSTQLYSTRE 719
Query: 719 KNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNH 778
K LA LV M++YSLTY+ ++ +P + E F +
Sbjct: 720 KQQLASLVGTMLAYSLTYRQERT-----------PDGQYIYRLEPNVEELCRFPELPARK 768
Query: 779 YVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTNNAAVS 838
L KQ++ E+E +++ + A EN + + D + +
Sbjct: 769 -PLTYQAKQLIAREIEVEKMRRAE-------ASAQAEN---SPQVDGSSSGLEGLLGGSG 817
Query: 839 AKLIEKSKSLPYSRQCNPSTSTVLTTLDS-SRSSTASVKPKSSGDTKKSFRSSSSFFDRF 897
K + C P+ L+ R + +P+ FF R
Sbjct: 818 EKGV-----------CRPAPRNHEQRLEHIMRRAVREEQPE------------RDFFGRV 854
Query: 898 RKLSGKVSQDNDNAVQKATVER------DSLPLLFKFNEGFTNAVKRPVRMRDFL 946
S D A ++ +VER + F+FNEG +NAV+R + +RD L
Sbjct: 855 VVRSTAAPSAGDTAPEQDSVERRMGTAVGRSEVWFRFNEGVSNAVRRSLYIRDLL 909
>gi|195999648|ref|XP_002109692.1| hypothetical protein TRIADDRAFT_53969 [Trichoplax adhaerens]
gi|190587816|gb|EDV27858.1| hypothetical protein TRIADDRAFT_53969 [Trichoplax adhaerens]
Length = 806
Score = 295 bits (755), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 252/885 (28%), Positives = 371/885 (41%), Gaps = 244/885 (27%)
Query: 114 IDGDCLPVTAPSGGDRVYVKISSSGVEERVKKLDV-RAHSNS----------LTSEPIDV 162
I + LPVT S G RVYV+ S + L R HS L S P +
Sbjct: 114 IGSEWLPVTG-SDGRRVYVRFKKSDTDNFGSPLLASRNHSKGQLISPSGQLQLLSTPFSI 172
Query: 163 LLQKVEQEAFNKALNSSSEG---------QSDRSLPEKPVVHE----------QLWVDKY 203
L +VE+ K LN+++ + D + + V H+ LWVDKY
Sbjct: 173 LRDQVEEMRLKKLLNTTNTEAEPSKMEIEEGDANDTDGNVSHQDEKQKSKAMVSLWVDKY 232
Query: 204 APNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDS 263
+P+ + ELLSD TNR +L WLK WD VFG + E + + L + +QN+
Sbjct: 233 SPHHYRELLSDHSTNRSLLSWLKLWDKTVFGKDFNIPDETLANQL---AVDTQNR----- 284
Query: 264 SFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLG 323
P +KV LLCGPPGLG
Sbjct: 285 ---------------------------------------------PLKKVALLCGPPGLG 299
Query: 324 KTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSR--PKCLVIDEID 381
KTTLAHV A+H GY+V+E+NASDDRS +I QM+S+ D + P CL+IDEID
Sbjct: 300 KTTLAHVIARHAGYNVLEMNASDDRSVEIFRQRIESATQMHSISGDEKGLPNCLLIDEID 359
Query: 382 GALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICND 441
GA +VEV++K + R + AK + KK + L RP+ICICND
Sbjct: 360 GA---PTASVEVLIKFI---RNTENAK-----------VKKKSKGHQNILSRPIICICND 402
Query: 442 LYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSC 501
Y P+LR LRQ A V F S +R+ RL+ IC E + T AL+ L E DIRSC
Sbjct: 403 QYVPSLRQLRQHALVITFPPTSTNRLAGRLQDICRKEKLLTDLFALSALCSKAENDIRSC 462
Query: 502 LNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLR---------- 551
+NTLQFL ++ + + + +G+KD S FD+WK IF+++K +
Sbjct: 463 INTLQFLQRQSNRFSTDMVHTIRIGQKDQKGSLFDLWKNIFRQKKDRSFSAPVFNDQIEK 522
Query: 552 ---------NSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTV 602
N S+ + F + +L G+YD + G+ EN L +++ D +
Sbjct: 523 EADHLSYYPNHTPRMSSTAKRFYNILNLTMKAGEYDKLMQGLFENYLNIKFKDRYL---- 578
Query: 603 KCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAF 662
L Q I R + L V
Sbjct: 579 ---------TLFSQKIRRINYLVLNVM--------------------------------- 596
Query: 663 MEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDL 722
++ P I R+L +V + LL ILSP L A L S +K L
Sbjct: 597 -----------GEVSPTIRRNLFVSEVVMYLLPSLLEILSPAGLANNA-QLHSQADKEQL 644
Query: 723 AQLVSAMVSYSLTYKNTK-SDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVL 781
++V+AM+SY+L+Y+ + SD N L F+PPI+E I + G ++ L
Sbjct: 645 LRVVNAMISYNLSYQQIRNSDGQYNYL------------FEPPIDEVIHYPG-QTQQKQL 691
Query: 782 ALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTNNAAVSAKL 841
+ +KQ++ +VE ++ K + + E D + +K
Sbjct: 692 SYNIKQIIAQQVEHGKL---------------KWHANEINELDKQQPLSK---------- 726
Query: 842 IEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDRFRKLS 901
E + + +++ P S + L S G + R+ SF D +
Sbjct: 727 -ELKRDIVNTKRMPPKESKIAEIL-------------SGGGDQPFARNQDSFLDAVSE-- 770
Query: 902 GKVSQDNDNAVQKATVERDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
DN N ++ ++FNEGFTNAV+R ++M+ L
Sbjct: 771 ----SDNKNLPEELKAS-----FWYRFNEGFTNAVRRNIKMKHLL 806
>gi|405951905|gb|EKC19774.1| Chromosome transmission fidelity protein 18-like protein, partial
[Crassostrea gigas]
Length = 747
Score = 295 bits (755), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 185/505 (36%), Positives = 275/505 (54%), Gaps = 49/505 (9%)
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM- 367
P QK++LL GPPGLGKTTLAH+ AKHCGY+VVE+NASDDRS+ + K+ QM SV+
Sbjct: 175 PVQKIVLLNGPPGLGKTTLAHIIAKHCGYNVVEMNASDDRSADVFKTKLEAATQMKSVLE 234
Query: 368 ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCK 427
+D RP CLVIDEIDG+ + + ++L V + D+P + KKK
Sbjct: 235 SDPRPNCLVIDEIDGS---PQAVINILLNFVK-------------RSDEPGQKKKKKD-- 276
Query: 428 KASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIAL 487
+ LLRP+ICICND Y PALR LR A V F Q +R+ SRL + ++S++T L
Sbjct: 277 EGILLRPIICICNDQYVPALRQLRMNALVINFPQTEPARLASRLSEVAKSQSLRTDLNTL 336
Query: 488 TTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIF---QK 544
L TE DIRSC+NTLQF ++K+ L + + + VG+KD ++S F +W EIF ++
Sbjct: 337 LALCNKTENDIRSCINTLQFCFRQKKELTMRTVQTMNVGQKDSNKSLFSMWYEIFSLPRQ 396
Query: 545 RKTKRLR------NSVSSSSNVSNEFDFLHSLISNR--GDYDVIFDGIHENILQLQYHDP 596
+K K + + N+S E F + L + G+Y + G+ EN L+ ++ DP
Sbjct: 397 KKNKFISLHDIQGQDWKKNDNLSLESRFKNVLHAAHCTGEYSKLIQGMFENYLECKFKDP 456
Query: 597 VMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQ 656
M V D L +DL++ I TQ + Y P + +T H L + Q +++P + Q
Sbjct: 457 KMEGLVLANDWLCFTDLLNSQISSTQNYSIMPYIPYITVTFHLLFATNQTQRIQYPHADQ 516
Query: 657 RYRNAFMEKM---DIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHL 713
+AF+++ ++ S S + P + ++ +V + + PLL I+ P LRPV L
Sbjct: 517 ---DAFLQRQKSGNLVTSLMSDMLPSVRMFVNETDVVMEILPPLLEIIQ-PNLRPVNTQL 572
Query: 714 LSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKG 773
S KEK DLAQL+ M++Y++TY K+ T DP + E F G
Sbjct: 573 YSVKEKEDLAQLIRTMIAYNMTYNQEKT-----------PEGQYTYVLDPNMEEVARFTG 621
Query: 774 YRSNHYVLALAVKQVLVHEVEKQRI 798
+ H L A KQ++ E+ +R+
Sbjct: 622 MKQ-HKQLTYAAKQLISREIGLERL 645
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 71/141 (50%), Gaps = 22/141 (15%)
Query: 116 GDCLPVTAPSGGDRVYVKISSS-GVEERVKKLDVRAHSNSLTSEPIDVLLQKVEQ----- 169
GD + T S G+ Y+K+ + + + + R ++ L S + L ++ E+
Sbjct: 3 GDFM-CTTNSDGEMFYIKLKDEIAMTKEFEDIGKRKKTSQLLSVSFETLREQAEKLRQEK 61
Query: 170 -----EAFNKALNSS-----SEGQSDRSLPEKPVVHEQ---LWVDKYAPNSFTELLSDEQ 216
E + +N SE + D + EK V HE LWV+K+AP ++T+LLSDE
Sbjct: 62 LMAEAEMLTQEINRDLSERLSEDEDDEA--EKAVNHEAEKLLWVEKFAPKTYTDLLSDES 119
Query: 217 TNREVLLWLKQWDSCVFGSEI 237
NR +L WLK WD VFG ++
Sbjct: 120 INRTLLHWLKLWDYVVFGKDV 140
>gi|301095569|ref|XP_002896884.1| chromosome transmission fidelity protein, putative [Phytophthora
infestans T30-4]
gi|262108531|gb|EEY66583.1| chromosome transmission fidelity protein, putative [Phytophthora
infestans T30-4]
Length = 881
Score = 295 bits (754), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 235/807 (29%), Positives = 385/807 (47%), Gaps = 116/807 (14%)
Query: 159 PIDVLLQKVEQEAFNKALNSSSE------GQSDRSLPEKPVVHEQLWVDKYAPNSFTELL 212
PI L++ VE+ N+A + G D+ P + LW+DK+ P SF +LL
Sbjct: 172 PIRELMETVERMEINEAAAKEDKAMLRELGSDDKKEPH--ASNTVLWLDKFRPQSFLDLL 229
Query: 213 SDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGN 272
SDE+TNREVL W+K WD VF + R A+ HS S F ++
Sbjct: 230 SDERTNREVLSWIKSWDRFVFPKKKR--------AIGAHSATPAKT----SGFGALHKSP 277
Query: 273 RWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAA 332
WS +L +NS +D K+ P K++L+CGPPG GKTTLA++ A
Sbjct: 278 -WSQ-------SLSQNYANSIAGEDDEDKR------PFNKIILICGPPGAGKTTLANIVA 323
Query: 333 KHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGAL--GDGKGA 390
+H GY+ +EVNASDDR++ + NKI+ ++M S+ + +P C+++DEIDGA+ DGK
Sbjct: 324 RHAGYNPIEVNASDDRTAPVLRNKIISAMEMQSIWGERKPNCIILDEIDGAMNGSDGKSG 383
Query: 391 VEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSL 450
+EVI ++V+A + A A ++ + L RP+ICICNDLYA LR L
Sbjct: 384 IEVIQEIVNAPLERKKAGAKTAAKN------------RHPLTRPLICICNDLYASVLRPL 431
Query: 451 RQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQF-LD 509
RQ+AK+ P R+V+RLK IC +E ++ S+ AL TL + DIR CLNTLQF
Sbjct: 432 RQMAKIFTLDAPHSQRLVTRLKCICRHEGIRASTGALATLCSSADNDIRYCLNTLQFQTT 491
Query: 510 KKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHS 569
+ + V + + +V +KD + F++ +F + ++ NS V+ + D
Sbjct: 492 QSRGKTGVATLSTGLVAQKDHAHGMFEVLDLVFYETRS----NSAKREVPVAEKID---E 544
Query: 570 LISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRT---QQMPL 626
+++ G++ ++ G+ EN+ ++ ++DP M K + LG L +Y R QQ
Sbjct: 545 AVASLGNFPLLISGLDENVPKMIFNDPTMNKICDVFEWLG---LAAEYEYRARSEQQYAF 601
Query: 627 YVYQPPLAITVHRLVSQIQKPNLEWPKSY--QRYRNAFMEKMDIFKSWHSKIPPYISRHL 684
Y P AI H + +E+P+ + R E + + +++ P + +
Sbjct: 602 QAYIPFAAIATHASCCTSSRRRVEYPRGQFEAQKRRDRSENILTALTEGAQLQPLL--RM 659
Query: 685 STESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPL 744
S LV D + L+ LS P +R + L + +EK + +L+ M S L++++ K P
Sbjct: 660 SPSVLVVDVVPWLVASLS-PNIRRINPSLQTKEEKLMIQRLIQLMASLGLSFRH-KYRP- 716
Query: 745 LNNLGNEVSHDVSTLSFDPPINEFITFK---GYRSNHYVLALAVKQVLVHEVEKQRIMQV 801
+ S D + +P +NE + F+ G Y+L ++V++++ EVE +++ +
Sbjct: 717 ------DGSED---YALEPALNELVEFRSREGGTPYQYMLPISVRKMIAREVELEQMRR- 766
Query: 802 TIGKSEHLADGYKENMDLAGEEDSKTESAKTNNAAVSAKLIEKSKSLPYSRQCNPSTSTV 861
+ + S K NN+ A ++KS + + V
Sbjct: 767 ---------------------NEKSSPSVKQNNSKSPAVAVDKSSEATIEEKA-AKAAYV 804
Query: 862 LTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDRFR--KLSGKVSQDNDNAVQKATVER 919
L L S VK + + F + R R +L+ K+ N K +
Sbjct: 805 LPEL----SDVELVKKDEALRKRNPFAFAHREAKRKRDEELNAKLKLQRTNDAHKHS--- 857
Query: 920 DSLPLLFKFNEGFTNAVKRPVRMRDFL 946
+ +KFNEG+T +K V + D L
Sbjct: 858 ---RVHYKFNEGYTCGIKTAVYISDLL 881
>gi|255073963|ref|XP_002500656.1| predicted protein [Micromonas sp. RCC299]
gi|226515919|gb|ACO61914.1| predicted protein, partial [Micromonas sp. RCC299]
Length = 669
Score = 294 bits (752), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 176/505 (34%), Positives = 276/505 (54%), Gaps = 28/505 (5%)
Query: 307 GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV 366
G P KVLLL G PG+GKTTLAHVAAKH GY VVEVNASDDRS+ + +K+ D VQM V
Sbjct: 92 GRPVHKVLLLTGGPGIGKTTLAHVAAKHAGYRVVEVNASDDRSADALRSKVTDAVQMQPV 151
Query: 367 MADSRPKCLVIDEIDGALG--DGKGAVEVILKMVSAERKSNTAK---ENVAKEDQPEKIS 421
+ D RP +VIDEIDGALG +G+GA++ +L +++ K + + EN A D
Sbjct: 152 IGDKRPNLVVIDEIDGALGGAEGRGAIQALLSIINGGGKGSRVRHGDENDAGADNDAVGK 211
Query: 422 KKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMK 481
K K L+RP+ICICNDLYAPALR LR++AK+ + P+ +R+ RL+ +C ++++
Sbjct: 212 KTKRKGPGPLMRPIICICNDLYAPALRPLREVAKIFRMVPPASARLNQRLRDVCAKQTLR 271
Query: 482 TSSIALTTLAEYTECDIRSCLNTLQFLDKKK-EILNVMDIGSQVVGRKDMSRSAFDIWKE 540
+ A+ LAE +E D+R+CLN LQ + +K + + + D+ ++ VG KDMS A +W+
Sbjct: 272 ADTRAINALAEKSEGDVRACLNALQMIAQKGTDAVTLRDV-NENVGEKDMSMQARMVWES 330
Query: 541 IFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLK 600
+ + + N + L+S +++ GD +++ G+ ENI L+ D M+K
Sbjct: 331 LL----SGHIANKRTRKQTRPEHTKHLYSQVASFGDNELMLSGLFENINNLRLGDTSMVK 386
Query: 601 TVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQI-QKPNLEWPKSYQRYR 659
+ K LD + ++D+ + L Y A+ VH VS NLEWP+ + +R
Sbjct: 387 SAKALDAMVDADVFQGAGFKKGHFHLQPYVASAAMGVHACVSNAPAATNLEWPQQGKMHR 446
Query: 660 NAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEK 719
++ + + W + + S++ + ++I LL ++ P +RPVA + L E
Sbjct: 447 E-MVKNRTMLRGWATSSKLLAA---SSDQTLCETIPYLLTAIA-PEVRPVAANFLRPDEA 501
Query: 720 NDLAQLVSAMVSYSLTYKNTKSD--PLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRS- 776
+ VS MV++ L+Y P + G + S + DPP++ F ++
Sbjct: 502 KLMRNSVSTMVAHGLSYAAPPEGGVPFGSFRGAQAS-----MVLDPPVDRVCAFGSDKTF 556
Query: 777 ---NHYVLALAVKQVLVHEVEKQRI 798
VL AVK ++ HEV + I
Sbjct: 557 GGVPRRVLPAAVKSMIQHEVRMEEI 581
>gi|296090489|emb|CBI40820.3| unnamed protein product [Vitis vinifera]
Length = 201
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 145/194 (74%), Positives = 158/194 (81%), Gaps = 21/194 (10%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSR 371
++LLLCGPPGLGKTTLAHVAAKHCGYHVVE+N SDDRSSSTIE KILDVVQMNSVM DS+
Sbjct: 29 QILLLCGPPGLGKTTLAHVAAKHCGYHVVEINVSDDRSSSTIEAKILDVVQMNSVMEDSK 88
Query: 372 PKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASL 431
P CLVIDEIDGALGDGKGAVEVILK+VS ERK + K ASL
Sbjct: 89 PNCLVIDEIDGALGDGKGAVEVILKIVSTERKGH---------------------KTASL 127
Query: 432 LRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLA 491
RPVICICNDLYA ALR LRQ+AKVH+F+QP+VSRVVSRLK+ICN E +KT+S AL LA
Sbjct: 128 SRPVICICNDLYALALRPLRQVAKVHIFVQPTVSRVVSRLKYICNMEGLKTNSTALAALA 187
Query: 492 EYTECDIRSCLNTL 505
EYTECDIRSCLNTL
Sbjct: 188 EYTECDIRSCLNTL 201
>gi|157118489|ref|XP_001659131.1| hypothetical protein AaeL_AAEL008320 [Aedes aegypti]
gi|108875683|gb|EAT39908.1| AAEL008320-PA [Aedes aegypti]
Length = 970
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 237/787 (30%), Positives = 351/787 (44%), Gaps = 134/787 (17%)
Query: 189 PEKPVVHEQ---LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVL 245
P+ VV +Q LWV+KY P + +LLSDE TNR +L WLK WD VFG E +
Sbjct: 289 PDVVVVPDQGNSLWVEKYRPKRYVDLLSDETTNRSLLQWLKLWDKVVFGREPKE------ 342
Query: 246 SALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRS 305
++ KQ + SF +K G SNG W KK RS
Sbjct: 343 ---------KKDVKQLN-SFNKKT-GRFESNG--------------------GWKKKNRS 371
Query: 306 T--------GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKI 357
G P QKV LLCGPPGLGKTTLAH A+H GY V EVNASDDRS +
Sbjct: 372 ALNTELDEHGRPMQKVALLCGPPGLGKTTLAHTIARHAGYVVREVNASDDRSPEAFRIAL 431
Query: 358 LDVVQMNSVM-ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQ 416
QM SV+ D RP C+V+DEIDGA ++ +LK +S K+ ++ +
Sbjct: 432 ESGTQMKSVLNEDKRPNCIVLDEIDGA---PVATIDFLLKFISGSVSQKGGKKGKGEKTE 488
Query: 417 PEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICN 476
K L RP+ICICND+Y PALR LRQIA V F +R+ RL I
Sbjct: 489 -----------KFILKRPIICICNDMYVPALRQLRQIAFVVNFPPTECARLAERLLSIAK 537
Query: 477 NESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFD 536
E ++T ++ LA+ + D+RSCL+ LQF K+ + + D+ VG+KD + F
Sbjct: 538 REKIETDLTSMLALADKSGNDVRSCLSMLQFCSSLKKPIRLTDVLKSTVGQKDRHKGLFG 597
Query: 537 IWKEIFQKRKTKR--------------LRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFD 582
IW IFQ ++ K+ +S ++ ++N D +H GD D +
Sbjct: 598 IWSAIFQIQRPKKTLVDADSCESDAIVTLTDMSPATRMTNILDVIHMA----GDQDRLMQ 653
Query: 583 GIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVS 642
G+ EN L + DP M + D +D + Q I Q +Y Y + H L +
Sbjct: 654 GVFENYLHQKMPDPNMAGVAEACDWFCFNDRIQQVINHQQNYSIYPYLAYGFVVWHYLFA 713
Query: 643 QIQKPNLEWP-KSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHIL 701
+ P + +P K ++ + K+ I + + +++ D++ PLL +
Sbjct: 714 SLAWPKINFPNKGFENSQKLATCKL-ILTGLRKGLSAQLKGIGEGPTVLLDTV-PLLKRV 771
Query: 702 SPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSF 761
P+LR V++ LL+ KEK+DL V M + L Y KS +
Sbjct: 772 LSPSLRSVSIQLLTPKEKSDLTHTVEVMADFGLNYIQLKS-----------TDGTYAYQL 820
Query: 762 DPPINEFITFKGYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAG 821
DP I + F G + L KQ++ EVE +R+ + + + G
Sbjct: 821 DPDIEQLGNFPGIAGQN--LNYFGKQLVAREVELERMRRAQ-----------PKAANSRG 867
Query: 822 EEDSKTESAKTNNAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSG 881
S TE + ++ + K IE K ST+ + L ++KPK
Sbjct: 868 PPASITEIKEASSGSKKTKKIEPRKE---------STAQLPNHLQ-------TLKPKQIT 911
Query: 882 DTKKSFRSSSSFFDRF--RKLSGKVSQDNDNAVQKATVERDSLPLLFKFNEGFTNAVKRP 939
+ K S FF R ++ V + + + K+ P+ +++ EGF NAV++
Sbjct: 912 EKVKQV-VSKDFFGRVTTKETVLSVQEGGTDTIVKS-------PIWYRYKEGFNNAVRKD 963
Query: 940 VRMRDFL 946
V + D +
Sbjct: 964 VTLIDLM 970
>gi|109127085|ref|XP_001087813.1| PREDICTED: chromosome transmission fidelity protein 18 homolog
isoform 4 [Macaca mulatta]
Length = 975
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 227/767 (29%), Positives = 354/767 (46%), Gaps = 90/767 (11%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LWVD++AP +TELLSD+ TNR +L WLK WD VFG E +
Sbjct: 281 LWVDEFAPRHYTELLSDDFTNRCLLKWLKLWDLVVFGHE------------------RPS 322
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
+K S + + G +++ + E G+ S P QKV LLC
Sbjct: 323 RKPRPSVEPARVSKEATAPGKWKSHEQV-LEEMLEAGLDPSQR--------PRQKVALLC 373
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM-ADSRPKCLV 376
GPPGLGKTTLAHV A+H GY VVE+NASDDRS +I QM SV+ A +P CLV
Sbjct: 374 GPPGLGKTTLAHVIARHAGYSVVEMNASDDRSPEAFRTRIEAATQMESVLGAGGKPNCLV 433
Query: 377 IDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVI 436
IDEIDGA A+ V+L +++ + + A P +++ + A L+RP+I
Sbjct: 434 IDEIDGA---PVAAINVLLSILNRKGPQEAEPQGPAV---PSGGGRRRRAEGALLMRPII 487
Query: 437 CICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTEC 496
CICND +AP+LR L+Q A + F SR+V RL+ + + M+T L L E T+
Sbjct: 488 CICNDQFAPSLRQLKQQALLLHFPPTLPSRLVQRLQEVSLRQGMRTDPGVLAALCEKTDN 547
Query: 497 DIRSCLNTLQFL-DKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLR---- 551
DIR+C+NTLQFL + + L+V D+ + VG KD R F +W+E+FQ + +R R
Sbjct: 548 DIRACINTLQFLYSRGQRELSVRDVQATRVGLKDQRRGLFSVWQEVFQLPRAQRRRVGQD 607
Query: 552 ------------NSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVML 599
S ++ S F + ++ G+++ + G+ +N L+L+ D +
Sbjct: 608 PTLPADTLLLGDGDAGSLTSASQRFYRVLHAAASAGEHEKVVQGLFDNFLRLRLRDSSLG 667
Query: 600 KTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYR 659
LD L DL+ +Q L Y P L + H L + P + +P S Q +
Sbjct: 668 AVCAALDWLAFDDLLAGAAHHSQSFQLLRYPPFLPVAFHVLFASSHTPRITFPSSQQEAQ 727
Query: 660 NAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEK 719
N + ++ ++ S I P +R +T + LL + P LRPV+ L S +EK
Sbjct: 728 NRMSQMRNLIQTLVSGIAP-AARSRATPQALLLDALCLLLDILAPKLRPVSTQLYSTREK 786
Query: 720 NDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHY 779
LA LV M++YSLTY ++ +P + E F +
Sbjct: 787 QQLASLVGTMLAYSLTYHQERT-----------PDGQYIYRLEPNVEELCRFPELPARK- 834
Query: 780 VLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTNNAAVSA 839
L KQ++ E+E +++ ++E LA E + + + +
Sbjct: 835 PLTYQAKQLIAREIEVEKMR-----RAEALAQ---------AENSPQVDGSSPGLEGLLG 880
Query: 840 KLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDRFRK 899
EK P R ++ R + +P+ + RS+++ +
Sbjct: 881 GSGEKGVCRPAPRNHEQRLEHIM------RRAVREEQPERDFFGRVVVRSTAA------R 928
Query: 900 LSGKVSQDNDNAVQKATVERDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
+G + + D+ ++ + F+FNEG +NAV+R + +RD L
Sbjct: 929 SAGDTAPEQDSVERRMGTAVGRSEVWFRFNEGVSNAVRRSLYIRDLL 975
>gi|355679046|gb|AER96271.1| CTF18, chromosome transmission fidelity factor 18-like protein
[Mustela putorius furo]
Length = 814
Score = 293 bits (749), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 220/672 (32%), Positives = 326/672 (48%), Gaps = 84/672 (12%)
Query: 117 DCLPVTAPSGGDRVYVKISSSGVEERVKK--LDV--RAHSN-SLTSEPIDVLLQKVEQEA 171
D + VT+ +GG R ++ + + V V+ LD+ R H L P L ++V+ E
Sbjct: 83 DYVSVTS-TGGSRAFLVLRADPVGTGVQTPFLDIWRRGHGRLDLLGVPFASLKEQVDNER 141
Query: 172 FNKALNSS-----------SEGQSDRSLPEKPVVHEQ------LWVDKYAPNSFTELLSD 214
+ L + SE + PE+ + Q LWVD++AP S+TELLSD
Sbjct: 142 RQQLLEEAHQLSDTLRSLRSEEVQHLAAPEEELASNQDESRHCLWVDEFAPRSYTELLSD 201
Query: 215 EQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRW 274
+ TNR +L WLK WD VFG E + L R K+ SS ++W
Sbjct: 202 DFTNRCLLKWLKLWDLVVFGRERPARRPRPGVELAR------GGKEAASS-------SKW 248
Query: 275 SNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKH 334
S+ + ++D + + P QKV LLCGPPGLGKTTLAHV A+H
Sbjct: 249 --------------RSHEQVLEDMLEAELDPSRRPRQKVALLCGPPGLGKTTLAHVIARH 294
Query: 335 CGYHVVEVNASDDRSSSTIENKILDVVQMNSVM-ADSRPKCLVIDEIDGALGDGKGAVEV 393
GY VVE+NASDDRS I QM SV+ A +P CLVIDEIDGA A+ V
Sbjct: 295 AGYCVVEMNASDDRSPEAFRTCIEAATQMESVLGAGGKPNCLVIDEIDGA---PVAAINV 351
Query: 394 ILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQI 453
+L ++ +RK E+ P +++ + L+RP+ICICND + PALR LRQ
Sbjct: 352 LLNIL--DRKGPQDTESGGP--VPPSGGRRRRAEGVLLMRPIICICNDQFVPALRQLRQQ 407
Query: 454 AKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFL-DKKK 512
A + F SR+ RL+ I + M+ AL L E T+ DIR+C+NTLQFL + +
Sbjct: 408 AFLLHFPPILSSRLAQRLQEISLRQGMRADPGALAALCEKTDNDIRACVNTLQFLHGRGR 467
Query: 513 EILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSS--------------- 557
L+V + + VG KD + F +W+E+FQ + +R R +
Sbjct: 468 RELSVHAVWTTRVGLKDQRKGLFSVWQEVFQLPRVQRQRWGRDPALPPHTLLLSDEHLGL 527
Query: 558 ---------SNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCL 608
+ S F + L ++ G+++ + G+ EN L+L+ D + LD L
Sbjct: 528 GPRAAEVPLTTASQRFYHILHLAASAGEHEKVVQGLFENFLRLRLRDSSLGTVCAALDWL 587
Query: 609 GNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDI 668
DL+ Q L Y P L + H L + P + +P S Q +N ++
Sbjct: 588 AFDDLLSCAAYHGQSFQLLRYLPFLLVAFHLLFASSHVPRIAFPSSQQEAQNRTSRTQNL 647
Query: 669 FKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSA 728
++ + I P + ++L+ D++ +L IL+ P LRPV+ L S +EK LA LV
Sbjct: 648 IQTLVAGIAPATRSRAAPQALILDALCLILDILA-PKLRPVSTQLYSTREKQQLASLVGT 706
Query: 729 MVSYSLTYKNTK 740
M++YSLTY+ +
Sbjct: 707 MLAYSLTYRQER 718
>gi|296090490|emb|CBI40821.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 292 bits (748), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 134/191 (70%), Positives = 157/191 (82%)
Query: 518 MDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDY 577
+I SQVVG+ DMSRS FDIWKEIFQ RK KR + S + S +SN FDFL+ LISNRGDY
Sbjct: 3 FEISSQVVGQTDMSRSIFDIWKEIFQNRKMKRAKRSDNCCSGMSNGFDFLYPLISNRGDY 62
Query: 578 DVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITV 637
D+I DGIHENI QL YHDP+M KTVKCL+ LG SDL+HQY+MRTQ M L VYQP AI++
Sbjct: 63 DLILDGIHENIFQLHYHDPIMQKTVKCLNTLGISDLVHQYVMRTQHMSLNVYQPLTAISL 122
Query: 638 HRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPL 697
HRL++Q+QKP +EWPKS+ RYR FMEK DI +SWH+KI PYISRHLS +S VED++SPL
Sbjct: 123 HRLIAQVQKPIIEWPKSFMRYRTTFMEKRDILRSWHNKIAPYISRHLSIKSFVEDTVSPL 182
Query: 698 LHILSPPTLRP 708
LHILSPPTLRP
Sbjct: 183 LHILSPPTLRP 193
>gi|348584746|ref|XP_003478133.1| PREDICTED: chromosome transmission fidelity protein 18 homolog
[Cavia porcellus]
Length = 960
Score = 292 bits (747), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 260/877 (29%), Positives = 393/877 (44%), Gaps = 137/877 (15%)
Query: 117 DCLPVTAPSGGDRVYVKI----SSSGVEERV--------KKLDVRAHSNSLTSEPIDVLL 164
D + VT+ +GGDR ++ + + +GV+ + +LD+ S + E +D
Sbjct: 174 DYINVTS-TGGDRAFLLLRPDSTGNGVQSPLLDVKWRSPGRLDLLGVSFASLKEQVD--- 229
Query: 165 QKVEQEAFNKALNSSSEGQSDRSLPEKPV-----VHEQLWVDKYAPNSFTELLSDEQTNR 219
+ Q +A S S RS EKP LWVD++AP +TELLSD+ TNR
Sbjct: 230 NERRQRLIQEAQQLSDTLHSLRSEEEKPADDQGTSQHCLWVDEFAPQRYTELLSDDFTNR 289
Query: 220 EVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNF 279
+L WLK WD VFG E + +R N W+
Sbjct: 290 CLLKWLKLWDLVVFGRE------------------------RPARKSRPNVEPAWTGKEA 325
Query: 280 RNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHV 339
S + S + +++ + S P QKV LLCGPPGLGKTTLAHV A+H GY V
Sbjct: 326 MVSGKWK---SQEQVVEEMLEAELDSNRRPRQKVALLCGPPGLGKTTLAHVIARHAGYCV 382
Query: 340 VEVNASDDRSSSTIENKILDVVQMNSVM-ADSRPKCLVIDEIDGALGDGKGAVEVILKMV 398
VE+NASDDRS +I QM SV+ A +P CLVIDEIDGA A+ V+L ++
Sbjct: 383 VEMNASDDRSPEAFRMRIEAATQMESVLGAGGKPNCLVIDEIDGA---PTAAINVLLSIL 439
Query: 399 SAERKSNTAKENVAKEDQPEK--ISKKKGCKKAS----LLRPVICICNDLYAPALRSLRQ 452
+ RK +E +P +S G ++ + L RP+ICICND + P+LR L+Q
Sbjct: 440 N--RKG-------PQEAEPGGPLVSLGGGRRRKTEGPLLTRPIICICNDQFVPSLRQLKQ 490
Query: 453 IAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFL-DKK 511
A + F SR+V RL+ IC + M++ AL L E T+ DIR+C+NTLQFL +
Sbjct: 491 QAFLLHFPPTLPSRLVQRLQEICLQQGMQSDPGALAALCEKTDNDIRACINTLQFLHGRG 550
Query: 512 KEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNS---------------VSS 556
++ L+V D+ + VG KD + F +W+E+FQ + +R V+S
Sbjct: 551 RQKLSVQDVQTTHVGLKDQRKGLFSVWQEVFQLPRAQRQLGGQDALLAHTLLPSERDVAS 610
Query: 557 SSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQ 616
+ S F + + ++ G+++ + G+ +N L+L+ D + LD L DL+ +
Sbjct: 611 LNLASQRFYHILQVTTSAGEHEKVVQGLFDNFLRLRLRDSSLGSVCMALDWLAFDDLVER 670
Query: 617 YIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKI 676
Q L Y P L H L + P + +P S Q +N + ++ ++ S I
Sbjct: 671 AAHHGQSFQLLRYLPFLPAAFHMLFASSHVPRIAFPSSQQEAQNRISQMRNLIQTLVSGI 730
Query: 677 PPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTY 736
P ++R +T + LL + P +RPV+ L SA+EK L+ LV M++YSLTY
Sbjct: 731 TP-VTRSRATPQTLILDTLCLLLDILAPKMRPVSTQLYSAREKQQLSSLVGTMLTYSLTY 789
Query: 737 KNTKSDPLLNNLGNEVSHDVSTL-SFDPPINEFITFKGYRSNHYVLALAVKQVLVHEVEK 795
+ E + D L +P + E F + L KQ++ E+E
Sbjct: 790 R------------QEHTPDGQYLYRLEPNVEEVCHFPELPARK-PLTYQAKQLIAREIEV 836
Query: 796 QR------IMQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTNNAAVSAKLIEKSKSLP 849
++ + Q +G EN L G D N + I K +L
Sbjct: 837 EKMRRAEALAQARVGPQVDQGPPGPEN--LVGSGDKGVRQPPLRNHEQRLEHIMKKATL- 893
Query: 850 YSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDRFRKLSGKVSQDND 909
Q L + ST + P+ +
Sbjct: 894 -EEQPEKDFFGRLVVRKVAAPSTETEAPEKDA----------------------IEWRMG 930
Query: 910 NAVQKATVERDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
AV ++ V F+FNEG +NAV+R + +RD L
Sbjct: 931 TAVGRSEV-------WFRFNEGVSNAVRRGLYIRDLL 960
>gi|58270156|ref|XP_572234.1| sister chromatid cohesion-related protein [Cryptococcus neoformans
var. neoformans JEC21]
gi|57228492|gb|AAW44927.1| sister chromatid cohesion-related protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 892
Score = 291 bits (746), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 225/793 (28%), Positives = 359/793 (45%), Gaps = 156/793 (19%)
Query: 162 VLLQKVEQEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREV 221
L K++ + ++ EGQ+ +K + +WVDKY P FT+LL +++ +REV
Sbjct: 240 ALKPKIDDRRLQRQIDEEFEGQT-----KKIQMGTTMWVDKYRPKKFTDLLGEDRVHREV 294
Query: 222 LLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRN 281
+ WLK+WD CVF K+Q + R
Sbjct: 295 MSWLKEWDKCVF------------------------KRQQPQAKKRP------------- 317
Query: 282 SNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVE 341
++ S+SK G P ++VLLL GPPG GKTTLA + A+H GY ++E
Sbjct: 318 -----FDASDSKPF------AVDPLGRPHERVLLLSGPPGYGKTTLASIVARHAGYRILE 366
Query: 342 VNASDDRSSSTIENKILDVVQMN-SVMADSRPKCLVIDEIDGALGDGKGAVEVILKM--- 397
+NASDDRS T++ +I + V S+ A+ +P C+VIDEIDGA G G ++ ++K+
Sbjct: 367 INASDDRSYQTVQTRIRNAVDAGTSLGAEGKPTCVVIDEIDGAGGGESGFIKALIKLIQD 426
Query: 398 VSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVH 457
V A++KSNT P K L RP+ICICNDLYAPALR LR A++
Sbjct: 427 VPAKKKSNT----------PAK----------PLRRPIICICNDLYAPALRPLRSYARII 466
Query: 458 VFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNV 517
F +P +V RL+ IC E +++ + +L TL E T D+RSCLNTLQF+ + ++
Sbjct: 467 RFRKPQAQSLVVRLRDICKREGLQSDTRSLNTLVEMTSGDVRSCLNTLQFIKSRSSVVTE 526
Query: 518 MDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDY 577
I + +G KD S + W IF K+ R S + + + +I++ G+Y
Sbjct: 527 EAIRATSLGLKDTSTTLQTAWNAIFIPLAAKKRR--AQGSIDDTRYLPRIIPIINSCGEY 584
Query: 578 DVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQP-PLAIT 636
D + G E+ L+ D M K + L SD + + Q+ L Y P +
Sbjct: 585 DKLLLGAFEHYPNLKPLDGTMKNLTKVHEWLAFSDRLQARVTSEQEWELLGYMPWGVGAW 644
Query: 637 VHRLVSQ--IQKPNLEWPK-SYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDS 693
L SQ KP E+PK Y+ Y+ + ++ ++ + +PP + +T + + +
Sbjct: 645 YPHLASQGNSSKPT-EYPKIDYEAYQTRASNE-EVATAFKNVLPPILRSMFTTSTTLTEL 702
Query: 694 ISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVS 753
I L+ I+SPP L+PV +++ EK L +LV M+ LT+ K++
Sbjct: 703 IPFLMRIISPP-LKPVNANIVKPAEKAVLERLVELMIPLGLTFYKEKAE----------- 750
Query: 754 HDVSTLSFDPPINEFITFKGYRSNHYVLALAVKQVLVHEVEKQRIMQVTIG----KSEHL 809
+ + +P I+ F+ + G R+ + + + + L+ + + Q G S+
Sbjct: 751 NGQPMMRLEPAIDVFVHYDGKRAEDILASRFMIRQLISQAMDAELAQKRGGADTEASDTG 810
Query: 810 ADGYKENMDLAGEEDSKTESAKTNNAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSR 869
ADG+ + L G AK E+ LP + TV + +
Sbjct: 811 ADGFAKAYGLMGN---------------IAKKPEEKALLPVTDFFG---RTVAVIEEDGK 852
Query: 870 SSTASVKPKSSGDTKKSFRSSSSFFDRFRKLSGKVSQDNDNAVQKATVERDSLPLLFKFN 929
+ V+P++ KK FR ++KFN
Sbjct: 853 LTADGVRPQAP--PKKKFRP-----------------------------------IYKFN 875
Query: 930 EGFTNAVKRPVRM 942
EG +AV+R V+M
Sbjct: 876 EGSLSAVRRSVKM 888
>gi|300794517|ref|NP_001179389.1| chromosome transmission fidelity protein 18 homolog [Bos taurus]
gi|296473567|tpg|DAA15682.1| TPA: CTF18, chromosome transmission fidelity factor 18 homolog [Bos
taurus]
Length = 978
Score = 291 bits (746), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 246/876 (28%), Positives = 394/876 (44%), Gaps = 134/876 (15%)
Query: 125 SGGDRVYVKISS----SGVEERVKKLDVRAHSN-SLTSEPIDVLLQKVEQEAFNKALNSS 179
+GGDR ++ + + +GV+ R L P L +KV+ E + L +
Sbjct: 183 TGGDRAFLVLRADPVGTGVQSPFHDTGWRGRGQLDLLGMPFTSLKEKVDSERRRRLLEEA 242
Query: 180 S----------------EGQSDRSLPEKPVVHEQ-----LWVDKYAPNSFTELLSDEQTN 218
E Q + E+P + LWVD++AP +TELLSD+ TN
Sbjct: 243 QRLSDMLCSLRSQEVEEETQPSGAPEEEPADSQDASQHCLWVDEFAPQRYTELLSDDFTN 302
Query: 219 REVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGN 278
R +L WLK WD VFG E + + R + ++ K+ +S ++W
Sbjct: 303 RCLLKWLKLWDLVVFGRE------KPVQKPRPSAEPARGGKEATAS-------SKW---- 345
Query: 279 FRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYH 338
S+ + +++ + +G P QKV LLCGPPGLGKTTLAHV A+H GY
Sbjct: 346 ----------KSHEQVLEEMLEAELDPSGRPRQKVALLCGPPGLGKTTLAHVIARHAGYC 395
Query: 339 VVEVNASDDRSSSTIENKILDVVQMNSVM-ADSRPKCLVIDEIDGALGDGKGAVEVILKM 397
VVE+NASDDRS +I QM SV+ A RP CLVIDEIDGA A+ V+L +
Sbjct: 396 VVEMNASDDRSPEAFRTRIEAATQMESVLGAGGRPNCLVIDEIDGA---PTAAINVLLSV 452
Query: 398 VSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVH 457
+ + + P +++ + L+RP+ICICND +AP+LR L+Q A +
Sbjct: 453 LD---RKGPQQAGPGGPSVPTGGGRRRRAEAGLLMRPIICICNDPFAPSLRQLKQQALLL 509
Query: 458 VFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEI-LN 516
F SR++ RL+ I M+ AL L E T+ DIR+C+N LQFL ++ + L+
Sbjct: 510 HFPPTLPSRLMQRLQEISLRRGMRADPGALAALCEKTDNDIRACINALQFLHRRGQRELS 569
Query: 517 VMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLR---------------NSVSSSSNVS 561
V + S +G KD + F +W+E+FQ + +R R + +S S ++
Sbjct: 570 VQAVQSTRIGLKDQRKGLFSVWQEVFQLPRAQRRRVRQDSTLRTHMLLLGDQLSGSGPLA 629
Query: 562 NE----------FDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNS 611
E + LH +S G+++ + G+ +N L+++ D + LD L
Sbjct: 630 AEAPLTTAAQRFYHILHVAMSA-GEHEKVVQGLFDNFLRMRLRDSSLGAVCTALDWLAFD 688
Query: 612 DLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKS 671
DL+ + + +Q L Y P L H L + P + +P S Q +N + ++ ++
Sbjct: 689 DLLGRAALHSQSFQLMCYLPFLLPAFHLLFASSHVPRITFPSSQQEAQNRMNQTQNLIQT 748
Query: 672 WHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVS 731
S I P +R + + LL + P LRPV+ L SA+EK LA LV M++
Sbjct: 749 LVSGITP-ATRSWAAPQALILDTLCLLLDILTPKLRPVSTQLYSAREKQQLASLVGTMLA 807
Query: 732 YSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLALAVKQVLVH 791
YSLTY+ ++ +P + E F + L KQ++
Sbjct: 808 YSLTYRQDRT-----------PDGQYIYRLEPNVEEVCRFPELPARK-PLTYQAKQLIAR 855
Query: 792 EVEKQRIMQVTIGKSEHLADGYK-ENMDLAGEEDSKTESAKTNNAAVSAKLIEKSKSLPY 850
EVE +++ +V S DG + + G + + + N + I K +L
Sbjct: 856 EVEVEKMRRVE--ASARARDGPQVDGGPPGGSGEKELQPPAPCNHKQRLECILKRAALEE 913
Query: 851 SRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDRFRKLSGKVSQDNDN 910
+ + V+ ++ ST P++ DT + R++ V + +
Sbjct: 914 QPERDFFGRVVVKR--AAAPSTGHEAPET--DTAE------------RRVGTAVGRSD-- 955
Query: 911 AVQKATVERDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
+ F+F EG +NAV+R + +RD L
Sbjct: 956 -------------VWFRFKEGVSNAVRRSLYIRDLL 978
>gi|426380603|ref|XP_004056952.1| PREDICTED: chromosome transmission fidelity protein 18 homolog
[Gorilla gorilla gorilla]
Length = 975
Score = 291 bits (745), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 231/773 (29%), Positives = 352/773 (45%), Gaps = 102/773 (13%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LWVD++AP +TELLSD+ TNR +L WLK WD VFG + A + ++
Sbjct: 281 LWVDEFAPRHYTELLSDDFTNRCLLKWLKLWDLVVFGHD--------RPARKPRPSVEPA 332
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
+ +++ K W S+ E G+ S P QKV LLC
Sbjct: 333 RVSKEATAPGK-----W------KSHEQVLEEMLEAGLDPSQR--------PRQKVALLC 373
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM-ADSRPKCLV 376
GPPGLGKTTLAHV A+H GY VVE+NASDDRS +I QM SV+ A +P CLV
Sbjct: 374 GPPGLGKTTLAHVIARHAGYSVVEMNASDDRSPEVFRTRIEAATQMESVLGAGGKPNCLV 433
Query: 377 IDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVI 436
IDEIDGA A+ V+L +++ + + A P +++ + L+RP+I
Sbjct: 434 IDEIDGA---PVAAINVLLSILNRKGPQEVGPQGPAV---PSGGGRRRRAEGGLLMRPII 487
Query: 437 CICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTEC 496
CICND +AP+LR L+Q A + F SR+V RL+ + + M+ L L E T+
Sbjct: 488 CICNDQFAPSLRQLKQQAFLLHFPPTLPSRLVQRLQEVSLRQGMRADPGVLAALCEKTDN 547
Query: 497 DIRSCLNTLQFL-DKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLR---- 551
DIR+C+NTLQFL + + L+V D+ + VG KD R F +W+E+FQ + +R R
Sbjct: 548 DIRACINTLQFLYSRGQRELSVRDVQATRVGLKDQRRGLFSVWQEVFQLPRAQRCRVGQD 607
Query: 552 ------------NSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVML 599
S ++ S F + ++ G+++ + G+ +N L+L+ D +
Sbjct: 608 PALPADTLLLGDGDAGSLTSASQRFYRVLHAAASAGEHEKVVQGLFDNFLRLRLRDSSLG 667
Query: 600 KTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYR 659
LD L DL+ +Q L Y P L + H L + P + +P S Q +
Sbjct: 668 AVCVALDWLAFDDLLAGAAHHSQSFQLLRYPPFLPVAFHVLFASSHTPRITFPSSQQEAQ 727
Query: 660 NAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEK 719
N + ++ ++ S I P +R +T + LL + P LRPV+ L S +EK
Sbjct: 728 NRMSQMRNLIQTLVSGIAP-ATRSRATPQALLLDALCLLLDILAPKLRPVSTQLYSTREK 786
Query: 720 NDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHY 779
LA LV M++YSLTY+ ++ +P + E F +
Sbjct: 787 QQLASLVGTMLAYSLTYRQERT-----------PDGQYIYRLEPNVEELCRFPELPARK- 834
Query: 780 VLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTNNAAVSA 839
L KQ++ EVE +++ + A + EN + + + +
Sbjct: 835 PLTYQTKQLIAREVEVEKMRRAE-------ASAWVEN-------SPQVDGSPPGLEGLLG 880
Query: 840 KLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDRFRK 899
+ EK P R ++ R + +P+ FF R
Sbjct: 881 GIGEKGVHRPAPRNHEQRLEHIM------RRAAREEQPE------------KDFFGRVVV 922
Query: 900 LSGKVSQDNDNAVQKATVER------DSLPLLFKFNEGFTNAVKRPVRMRDFL 946
S V D A ++ +VER + F+FNEG +NAV+R + +RD L
Sbjct: 923 RSTAVPSAGDTAPEQDSVERRMGTAVGRSEVWFRFNEGVSNAVRRSLYVRDLL 975
>gi|134117578|ref|XP_772560.1| hypothetical protein CNBL0400 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255175|gb|EAL17913.1| hypothetical protein CNBL0400 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 892
Score = 291 bits (745), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 226/793 (28%), Positives = 358/793 (45%), Gaps = 156/793 (19%)
Query: 162 VLLQKVEQEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREV 221
L K++ + ++ EGQ+ +K + +WVDKY P FT+LL +++ +REV
Sbjct: 240 ALKPKIDDRRLQRQIDEEFEGQT-----KKIQMGTTMWVDKYRPKKFTDLLGEDRVHREV 294
Query: 222 LLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRN 281
+ WLK+WD CVF +R Q KK+ +F
Sbjct: 295 MSWLKEWDKCVF---------------KRQQ--PQAKKRPFDAF---------------- 321
Query: 282 SNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVE 341
DS G P ++VLLL GPPG GKTTLA + A+H GY ++E
Sbjct: 322 ---------------DSKPFPVDPLGRPHERVLLLSGPPGYGKTTLASIVARHAGYRILE 366
Query: 342 VNASDDRSSSTIENKILDVVQMN-SVMADSRPKCLVIDEIDGALGDGKGAVEVILKM--- 397
+NASDDRS T++ +I + V S+ A+ +P C+VIDEIDGA G G ++ ++K+
Sbjct: 367 INASDDRSYQTVQTRIRNAVDAGTSLGAEGKPTCVVIDEIDGAGGGESGFIKALIKLIQD 426
Query: 398 VSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVH 457
V A++KSNT P K L RP+ICICNDLYAPALR LR A++
Sbjct: 427 VPAKKKSNT----------PAK----------PLRRPIICICNDLYAPALRPLRSYARII 466
Query: 458 VFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNV 517
F +P +V RL+ IC E +++ + +L TL E T D+RSCLNTLQF+ + ++
Sbjct: 467 RFRKPQAQSLVVRLRDICKREGLQSDTRSLNTLVEMTSGDVRSCLNTLQFIKSRSSVVTE 526
Query: 518 MDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDY 577
I + +G KD S + W IF K+ R S + + + +I++ G+Y
Sbjct: 527 EAIRATSLGLKDTSTTLQTAWNAIFIPLAAKKRR--AQGSIDDTRYLPRIIPIINSCGEY 584
Query: 578 DVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQP-PLAIT 636
D + G E+ L+ D M K + L SD + + Q+ L Y P +
Sbjct: 585 DKLLLGAFEHYPNLKPLDGTMKNLTKVHEWLAFSDRLQARVTSEQEWELLGYMPWGVGAW 644
Query: 637 VHRLVSQ--IQKPNLEWPK-SYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDS 693
L SQ KP E+PK Y+ Y+ + ++ ++ + +PP + +T + + +
Sbjct: 645 YPHLASQGNSSKPT-EYPKIDYEAYQTRASNE-EVATAFKNVLPPILRSMFTTSTTLTEL 702
Query: 694 ISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVS 753
I L+ I+SPP L+PV +++ EK L +LV M+ LT+ K++
Sbjct: 703 IPFLMRIISPP-LKPVNANIVKPAEKAVLERLVELMIPLGLTFYKEKAE----------- 750
Query: 754 HDVSTLSFDPPINEFITFKGYRSNHYVLALAVKQVLVHEVEKQRIMQVTIG----KSEHL 809
+ + +P I+ F+ + G R+ + + + + L+ + + Q G S+
Sbjct: 751 NGQPMMRLEPAIDVFVHYDGKRAEDILASRFMIRQLISQAMDAELAQKRGGADTEASDTG 810
Query: 810 ADGYKENMDLAGEEDSKTESAKTNNAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSR 869
ADG+ + L G AK E+ LP + TV + +
Sbjct: 811 ADGFAKAYGLMGN---------------IAKKPEEKALLPVTDFFG---RTVAVIEEDGK 852
Query: 870 SSTASVKPKSSGDTKKSFRSSSSFFDRFRKLSGKVSQDNDNAVQKATVERDSLPLLFKFN 929
+ V+P++ KK FR ++KFN
Sbjct: 853 LTADGVRPQAP--PKKKFRP-----------------------------------IYKFN 875
Query: 930 EGFTNAVKRPVRM 942
EG +AV+R V+M
Sbjct: 876 EGSLSAVRRSVKM 888
>gi|405124039|gb|AFR98801.1| chromosome transmission fidelity protein 18 [Cryptococcus
neoformans var. grubii H99]
Length = 893
Score = 291 bits (745), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 203/693 (29%), Positives = 337/693 (48%), Gaps = 96/693 (13%)
Query: 149 RAHSNSLTSEPIDVLLQKV-EQEAFNKALNSSSEGQSDRSLPEKPVVHEQ-LWVDKYAPN 206
+ ++ L S P+ LL +V E ++ KAL + + P + E +WVDKY P
Sbjct: 223 KGNAGQLLSVPLHKLLDQVNELKSREKALRLQRQIDEELEGPANKIQTETTMWVDKYRPK 282
Query: 207 SFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFT 266
FT+LL +++ +REV+ WLK+WD CVF K+Q +
Sbjct: 283 KFTDLLGEDRVHREVMSWLKEWDKCVF------------------------KRQQAQAKK 318
Query: 267 RKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTT 326
R ++ S+SK + G P ++VLLL GPPG GKTT
Sbjct: 319 RP------------------FDASDSKPFAED------PLGRPHERVLLLSGPPGYGKTT 354
Query: 327 LAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMN-SVMADSRPKCLVIDEIDGALG 385
LA V A+H GY ++E+NASDDRS T++++I + + S+ A+ +P C+VIDE+DGA G
Sbjct: 355 LASVVARHAGYRILEINASDDRSYQTVQSRIRNAIDAGTSLGAEGKPTCVVIDEVDGAGG 414
Query: 386 DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAP 445
G ++ ++K++ +D P + KK L RP+ICICND+YAP
Sbjct: 415 GENGFIKALIKLI---------------QDVPAR--KKSNVPAKPLRRPIICICNDVYAP 457
Query: 446 ALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
ALR LR A++ F +P +V RL+ IC E +++ + +L TL E T D+RSCLNTL
Sbjct: 458 ALRPLRSHARIIRFRKPQAQSLVVRLRDICKREGLQSDTRSLNTLVEMTSGDVRSCLNTL 517
Query: 506 QFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIF--QKRKTKRLRNSVSSSSNVSNE 563
QF+ + ++ I + +G KD S + W +F K +R + S+ + +S
Sbjct: 518 QFIKSRSVVVTEEAIRATSLGLKDTSTTLQTAWNALFIPLAAKKRRAQGSIDDTRYLSR- 576
Query: 564 FDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQ 623
+ +I++ G+YD + G E+ L+ D M K + L SD + + Q+
Sbjct: 577 ---IIPIINSCGEYDKLLLGAFEHYPNLKPLDGTMKNLTKVHEWLAFSDRLQARVTSEQE 633
Query: 624 MPLYVYQP-PLAITVHRLVSQ--IQKPNLEWPK-SYQRYRNAFMEKMDIFKSWHSKIPPY 679
L Y P + L SQ KP E+PK Y+ Y+ A + ++ ++ + +PP
Sbjct: 634 WELLGYMPWGVGAWYPHLASQGNSSKPT-EYPKIDYEAYQ-ARVSNEEVATAFKNVLPPI 691
Query: 680 ISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNT 739
+ +T + + + I L+ I+SPP L+PV +++ EK L +LV M+ LT+
Sbjct: 692 LRSMFTTSTTLTELIPFLMRIISPP-LKPVNANIVKPAEKAVLERLVELMIPLGLTFYKE 750
Query: 740 KSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLA-LAVKQVLVHEVEKQRI 798
K++ + + +P I+ F+ + G R+ + + ++Q++ ++ Q
Sbjct: 751 KAE-----------NGQPMMRLEPAIDVFVHYDGKRAEDILASRFMIRQLISQAMDAQLA 799
Query: 799 MQVTIGKSEHL---ADGYKENMDLAGEEDSKTE 828
+ +E + DG+ + L G K E
Sbjct: 800 RKRGEAGTETVDTGVDGFAKAYGLTGNVAKKPE 832
>gi|440913438|gb|ELR62888.1| Chromosome transmission fidelity protein 18-like protein [Bos
grunniens mutus]
Length = 978
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 246/876 (28%), Positives = 394/876 (44%), Gaps = 134/876 (15%)
Query: 125 SGGDRVYVKISS----SGVEERVKKLDVRAHSN-SLTSEPIDVLLQKVEQEAFNKALNSS 179
+GGDR ++ + + +GV+ + R L P L +KV+ E + L +
Sbjct: 183 TGGDRAFLVLRADPVGTGVQSPFRDTGWRGRGQLDLLGMPFTSLKEKVDSERRRRLLEEA 242
Query: 180 S----------------EGQSDRSLPEKPVVHEQ-----LWVDKYAPNSFTELLSDEQTN 218
E Q + E+P + LWVD++AP +TELLSD+ TN
Sbjct: 243 QRLSDMLCSLRSQEMEEETQPSGAPEEEPADSQDASQHCLWVDEFAPQRYTELLSDDFTN 302
Query: 219 REVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGN 278
R +L WLK WD VFG E + + R + ++ K+ +S ++W
Sbjct: 303 RCLLKWLKLWDLVVFGRE------KPVRKPRPSAEPARGGKEATAS-------SKW---- 345
Query: 279 FRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYH 338
S+ + +++ + +G P QKV LLCGPPGLGKTTLAHV A+H GY
Sbjct: 346 ----------KSHEQVLEEMLEAELDPSGRPRQKVALLCGPPGLGKTTLAHVIARHAGYC 395
Query: 339 VVEVNASDDRSSSTIENKILDVVQMNSVM-ADSRPKCLVIDEIDGALGDGKGAVEVILKM 397
VVE+NASDDRS +I QM SV+ A RP CLVIDEIDGA A+ V+L +
Sbjct: 396 VVEMNASDDRSPEAFRTRIEAATQMESVLGAGGRPNCLVIDEIDGA---PTAAINVLLSV 452
Query: 398 VSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVH 457
+ + + P +++ + L+RP+ICICND +AP+LR L+Q A +
Sbjct: 453 LD---RKGPQQAGPGGPSVPTGGGRRRRAEAGLLMRPIICICNDPFAPSLRQLKQQALLL 509
Query: 458 VFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEI-LN 516
F SR++ RL+ I M+ AL L E T+ DIR+C+N LQFL ++ + L+
Sbjct: 510 HFPPTLPSRLMQRLQEISLRRGMRADPGALAALCEKTDNDIRACINALQFLHRRGQWELS 569
Query: 517 VMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLR---------------NSVSSSSNVS 561
V + S +G KD + F +W+E+FQ + +R R + +S S ++
Sbjct: 570 VQAVQSTHIGLKDQRKGLFSVWQEVFQLPRAQRRRVGQASTLRTHMLLLGDQLSGSGPLA 629
Query: 562 NE----------FDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNS 611
E + LH +S G+++ + G+ +N L+++ D + LD L
Sbjct: 630 AEAPLTTAAQRFYHILHVAMSA-GEHEKVVQGLFDNFLRMRLRDSSLGAVCTALDWLAFD 688
Query: 612 DLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKS 671
DL+ + + Q L Y P L H L + P + +P S Q +N + ++ ++
Sbjct: 689 DLLGRAALHGQSFQLMRYLPFLLPAFHLLFASSHVPRITFPSSQQEAQNRMNQTQNLIQT 748
Query: 672 WHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVS 731
S I P +R + + LL + P LRPV+ L SA+EK LA LV M++
Sbjct: 749 LVSGITP-ATRSWAAPQALILDTLCLLLDILTPKLRPVSTQLYSAREKQQLASLVGTMLA 807
Query: 732 YSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLALAVKQVLVH 791
YSLTY+ ++ +P + E F + L KQ++
Sbjct: 808 YSLTYRQDRT-----------PDGQYIYRLEPNVEEVCHFPELPARK-PLTYQAKQLIAR 855
Query: 792 EVEKQRIMQVTIGKSEHLADGYK-ENMDLAGEEDSKTESAKTNNAAVSAKLIEKSKSLPY 850
EVE +++ +V S DG + + G + + + N + I K +L
Sbjct: 856 EVEVEKMRRVE--ASARARDGPQVDGGPPGGSGEKELQPPAPCNHKQRLECILKRAALEE 913
Query: 851 SRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDRFRKLSGKVSQDNDN 910
+ + V+ ++ ST P++ DT + R++ V + +
Sbjct: 914 QPERDFFGRVVVKR--AAAPSTGHEAPET--DTAE------------RRVGTAVGRSD-- 955
Query: 911 AVQKATVERDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
+ F+F EG +NAV+R + +RD L
Sbjct: 956 -------------VWFRFKEGVSNAVRRSLYIRDLL 978
>gi|350581877|ref|XP_003124720.3| PREDICTED: chromosome transmission fidelity protein 18 homolog [Sus
scrofa]
Length = 910
Score = 290 bits (742), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 208/660 (31%), Positives = 311/660 (47%), Gaps = 79/660 (11%)
Query: 174 KALNSSSEGQSDRSLPEKPVVHEQ-----LWVDKYAPNSFTELLSDEQTNREVLLWLKQW 228
+A E Q + E+P H+ LWVD++AP +TELLSD+ TNR +L WLK W
Sbjct: 185 RAEKVEEEAQPTGAPAEEPAPHQDASEHCLWVDEFAPQRYTELLSDDFTNRCLLKWLKLW 244
Query: 229 DSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYE 288
D VFG Q++ TRK R + + +
Sbjct: 245 DPVVFG---------------------QDRP------TRKPRPSVEPACGGKEATASSKW 277
Query: 289 NSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDR 348
S+ + +++ + +G P QKV LLCGPPGLGKTTLAHV A+H GY VVE+NASDDR
Sbjct: 278 KSHEQVLEEMLEAELDPSGRPRQKVALLCGPPGLGKTTLAHVIARHAGYCVVEMNASDDR 337
Query: 349 SSSTIENKILDVVQMNSVMA-DSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTA 407
S +I QM SV+ RP CLVIDEIDGA A+ V+L ++ +RK
Sbjct: 338 SPEAFRTRIEAATQMESVLGSGGRPNCLVIDEIDGA---PTAAINVLLSVL--DRKGPQE 392
Query: 408 KENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRV 467
E A +++ + L+RP+ICICND +AP+LR L+ A + F SR+
Sbjct: 393 AEPGAPAMA-AGGGRRRRAEGGLLMRPIICICNDQFAPSLRQLKPQALLLHFPPTLPSRL 451
Query: 468 VSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFL-DKKKEILNVMDIGSQVVG 526
RL+ I M+ AL L E T+ DIR+C+N LQFL + + L++ + + VG
Sbjct: 452 TQRLQEISQQRGMQADPGALAALCEKTDNDIRACINALQFLHGRGRRKLSIQVVQTTRVG 511
Query: 527 RKDMSRSAFDIWKEIFQKRKTKRLR---------------NSVSSSSNVSNE-------- 563
KD + F +W+E+FQ + +R R + + S ++ E
Sbjct: 512 LKDQRKGLFSVWQEVFQLPRAQRRRVGQDPTVPTPTLLLGDGHTGSGALTAEVPLTMASQ 571
Query: 564 --FDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRT 621
+ LH+ S G+++ + G+ +N L+L+ D + LD L DL+ +
Sbjct: 572 RFYHILHAAASA-GEHEKVVQGLFDNFLRLRLRDSSLGTVCVALDWLAFDDLLGRAAHHG 630
Query: 622 QQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYIS 681
Q L Y P L H L + P + +P S Q +N ++ K+ S I P +
Sbjct: 631 QNFQLLRYLPFLPPAFHLLFATSHVPRIAFPSSQQEAQNRMNRTQNLIKTLVSGITP-AT 689
Query: 682 RHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKS 741
R + + LL + P LRPV+ L S +EK LA LV M++YSLTY+ ++
Sbjct: 690 RSRAAPQALVLDTLCLLLDILAPKLRPVSTQLYSTREKQQLASLVGTMLAYSLTYRQERT 749
Query: 742 DPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLALAVKQVLVHEVEKQRIMQV 801
G V +P + E F + L KQ++ E+E +++ +V
Sbjct: 750 PD-----GQYVYR------LEPNVEEVCRFPELPARK-PLTYQAKQLIAREIEVEKMRRV 797
>gi|328767345|gb|EGF77395.1| hypothetical protein BATDEDRAFT_27550 [Batrachochytrium dendrobatidis
JAM81]
Length = 1211
Score = 289 bits (739), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 234/789 (29%), Positives = 363/789 (46%), Gaps = 140/789 (17%)
Query: 190 EKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALR 249
EK E LWVDKY P + +++ DEQ NR+VL W+KQWD CVFG ++ T L+ +
Sbjct: 531 EKKGTAEALWVDKYRPKMYVDMVGDEQLNRQVLTWVKQWDYCVFGKPVKRT----LATM- 585
Query: 250 RHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPP 309
N S F +K+ ++ + D + P
Sbjct: 586 -----------NQSQFRKKSL----------------FDQHKASVPVDKLQR-------P 611
Query: 310 EQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMAD 369
++++L LCGPPGLGKTTLAHV A H GY+VVE+NASDDR+++ +++KI+ V+ +VM +
Sbjct: 612 DRRILFLCGPPGLGKTTLAHVVAHHAGYNVVEINASDDRTTAVLKDKIISAVESQAVMGN 671
Query: 370 SRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKA 429
+P ++IDEIDG + G + +KM+ ++ + E+ + +K++K K +
Sbjct: 672 KKPNLVIIDEIDGV--NAGGGDQAFIKMLIKLTETKDSAED-SDFKSSKKVTKLKKKVQR 728
Query: 430 SLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTT 489
L RP+ICICND YA LR LRQ+A+V F P + RL IC E + +
Sbjct: 729 QLRRPIICICNDQYAQVLRPLRQVAQVFTFRPPPFQALAKRLYEICRWEGLHADLRTMMA 788
Query: 490 LAEYTECDIRSCLNTLQFLDKK-----KEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQ- 543
L E T+ D+RS ++TLQFL K KE+L +DI G KD SR F +W+ +F
Sbjct: 789 LCEMTQGDMRSAIHTLQFLSSKADHLTKEMLLGIDI-----GHKDFSRGLFKVWQMLFSM 843
Query: 544 ------KRKTKRLRNSVSSS---SNVSNE--FDFLHSLISNRGDYDVIFDGIHENILQLQ 592
KR R+ + ++ V + D + S + + G+YD I G E Q
Sbjct: 844 PSVKEAKRVGYMTRDEIDANRAPKQVQTDVYIDRIVSTLQHAGEYDKIMQGCFEFYPQTS 903
Query: 593 YHDPVMLKTVKCL------DCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQK 646
+ + + K L D D + I R QQ L YQP + + +RL + Q
Sbjct: 904 RFETMRSTSQKQLHSDDISDTTNIFDQLESRITRNQQFELMPYQPYMLVNFYRLFANAQG 963
Query: 647 PN--LEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPP 704
+ +E+P++ A E I +++ + R +ST L + P L + P
Sbjct: 964 RHMKMEFPRADYAAFVAKRETEGIMQTFITAAKCGEWRQISTVRL---ELVPFLVAILSP 1020
Query: 705 TLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPP 764
LRP + LS E+ L +LVS M ++ + + P + G+ + L FDPP
Sbjct: 1021 ELRPANIQSLSPTEQATLDRLVSIMSTFGI-----RMIPKVRPTGHTL------LEFDPP 1069
Query: 765 INEFITFKGYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEED 824
I++ + R + +KQ++ HE+E+ + DLA + +
Sbjct: 1070 IHDILILDQTRQPINEPSQTIKQLISHEIERNIV----------------RKKDLAMQNE 1113
Query: 825 SKTESAKTNNAAVSAKLIEKSKSLPYSRQCNPS-TSTVLT-TLDSSRSSTASVKPKSSGD 882
+A T+ SR NP STVL TL + S + P
Sbjct: 1114 MAKRNATTS-----------------SRVLNPEDKSTVLAETLKKAIVSRQVMVPIEEQP 1156
Query: 883 TKKSFRSSSSFFDRFRKLSGKV-----SQDNDNAVQKATVERDSLPLLFKFNEGFTNAVK 937
+ FF R + KV D +N ++ V L +K+NEGF+NAV+
Sbjct: 1157 VR-------DFFGRL--VDTKVPTVLAMSDKENKAPESLVR-----LAYKYNEGFSNAVR 1202
Query: 938 RPVRMRDFL 946
V ++DF
Sbjct: 1203 TTVYVKDFF 1211
>gi|39644454|gb|AAH06278.2| CTF18, chromosome transmission fidelity factor 18 homolog (S.
cerevisiae) [Homo sapiens]
Length = 975
Score = 287 bits (735), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 224/767 (29%), Positives = 351/767 (45%), Gaps = 90/767 (11%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LWVD++AP +TELLSD+ TNR +L WLK WD VFG E +
Sbjct: 281 LWVDEFAPRHYTELLSDDFTNRCLLKWLKLWDLVVFGHE------------------RPS 322
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
+K S + + G +++ + E G+ S P+QKV LLC
Sbjct: 323 RKPRPSVEPARVSKEATAPGKWKSHEQV-LEEMLEAGLDPSQR--------PKQKVALLC 373
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM-ADSRPKCLV 376
GPPGLGKTTLAHV A+H GY VVE+NASDDRS +I QM SV+ A +P CLV
Sbjct: 374 GPPGLGKTTLAHVIARHAGYSVVEMNASDDRSPEVFRTRIEAATQMESVLGAGGKPNCLV 433
Query: 377 IDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVI 436
IDEIDGA A+ V+L +++ + + A P +++ + L+RP+I
Sbjct: 434 IDEIDGA---PVAAINVLLSILNRKGPQEVGPQGPAV---PSGGGRRRRAEGGLLMRPII 487
Query: 437 CICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTEC 496
CICND +AP+LR L+Q A + F SR+V RL+ + + M+ L L E T+
Sbjct: 488 CICNDQFAPSLRQLKQQAFLLHFPPTLPSRLVQRLQEVSLRQGMRADPGVLAALCEKTDN 547
Query: 497 DIRSCLNTLQFL-DKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLR---- 551
DIR+C+NTLQFL + + L+V D+ + VG KD R F +W+E+FQ + +R R
Sbjct: 548 DIRACINTLQFLYSRGQRELSVRDVQATRVGLKDQRRGLFSVWQEVFQLPRAQRRRVGQD 607
Query: 552 ------------NSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVML 599
S ++ S F + ++ G+++ + G+ +N L+L+ D +
Sbjct: 608 PALPADTLLLGDGDAGSLTSASQRFYRVLHAAASAGEHEKVVQGLFDNFLRLRLRDSSLG 667
Query: 600 KTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYR 659
LD L DL+ +Q L Y P L + H L + P + +P S Q +
Sbjct: 668 AVCVALDWLAFDDLLAGAAHHSQSFQLLRYPPFLPVAFHVLFASSHTPRITFPSSQQEAQ 727
Query: 660 NAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEK 719
N + ++ ++ S I P +R +T + LL + P LRPV+ L S +EK
Sbjct: 728 NRMSQMRNLIQTLVSGIAP-ATRSRATPQALLLDALCLLLDILAPKLRPVSTQLYSTREK 786
Query: 720 NDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHY 779
LA LV M++YSLTY+ ++ +P + E F +
Sbjct: 787 QQLASLVGTMLAYSLTYRQERT-----------PDGQYIYRLEPNVEELCRFPELPARK- 834
Query: 780 VLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTNNAAVSA 839
L KQ++ E+E +++ + A EN + + + +
Sbjct: 835 PLTYQTKQLIAREIEVEKMRRAE-------ASARVEN-------SPQVDGSPPGLEGLLG 880
Query: 840 KLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDRFRK 899
+ EK P R ++ R + +P+ + RS++
Sbjct: 881 GIGEKGVHRPAPRNHEQRLEHIM------RRAAREEQPEKDFFGRVVVRSTAVLS----- 929
Query: 900 LSGKVSQDNDNAVQKATVERDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
+G + + D+ ++ + F+FNEG +NAV+R + +RD L
Sbjct: 930 -AGDTAPEQDSVERRMGTAVGRSEVWFRFNEGVSNAVRRSLYIRDLL 975
>gi|157118491|ref|XP_001659132.1| hypothetical protein AaeL_AAEL008320 [Aedes aegypti]
gi|108875684|gb|EAT39909.1| AAEL008320-PB [Aedes aegypti]
Length = 961
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 203/629 (32%), Positives = 297/629 (47%), Gaps = 81/629 (12%)
Query: 189 PEKPVVHEQ---LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVL 245
P+ VV +Q LWV+KY P + +LLSDE TNR +L WLK WD VFG E +
Sbjct: 289 PDVVVVPDQGNSLWVEKYRPKRYVDLLSDETTNRSLLQWLKLWDKVVFGREPKE------ 342
Query: 246 SALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRS 305
++ KQ + SF +K G SNG ++ N + + + +
Sbjct: 343 ---------KKDVKQLN-SFNKKT-GRFESNGGWKKKN------------RSALNTELDE 379
Query: 306 TGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNS 365
G P QKV LLCGPPGLGKTTLAH A+H GY V EVNASDDRS + QM S
Sbjct: 380 HGRPMQKVALLCGPPGLGKTTLAHTIARHAGYVVREVNASDDRSPEAFRIALESGTQMKS 439
Query: 366 VM-ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKK 424
V+ D RP C+V+DEIDGA ++ +LK +S K+ ++ +
Sbjct: 440 VLNEDKRPNCIVLDEIDGA---PVATIDFLLKFISGSVSQKGGKKGKGEKTE-------- 488
Query: 425 GCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSS 484
K L RP+ICICND+Y PALR LRQIA V F +R+ RL I E ++T
Sbjct: 489 ---KFILKRPIICICNDMYVPALRQLRQIAFVVNFPPTECARLAERLLSIAKREKIETDL 545
Query: 485 IALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQK 544
++ LA+ + D+RSCL+ LQF K+ + + D+ VG+KD + F IW IFQ
Sbjct: 546 TSMLALADKSGNDVRSCLSMLQFCSSLKKPIRLTDVLKSTVGQKDRHKGLFGIWSAIFQI 605
Query: 545 RKTKR--------------LRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQ 590
++ K+ +S ++ ++N D +H GD D + G+ EN L
Sbjct: 606 QRPKKTLVDADSCESDAIVTLTDMSPATRMTNILDVIHMA----GDQDRLMQGVFENYLH 661
Query: 591 LQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLE 650
+ DP M + D +D + Q I Q +Y Y + H L + + P +
Sbjct: 662 QKMPDPNMAGVAEACDWFCFNDRIQQVINHQQNYSIYPYLAYGFVVWHYLFASLAWPKIN 721
Query: 651 WP-KSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPV 709
+P K ++ + K+ I + + +++ D++ PLL + P+LR V
Sbjct: 722 FPNKGFENSQKLATCKL-ILTGLRKGLSAQLKGIGEGPTVLLDTV-PLLKRVLSPSLRSV 779
Query: 710 ALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFI 769
++ LL+ KEK+DL V M + L Y KS + DP I +
Sbjct: 780 SIQLLTPKEKSDLTHTVEVMADFGLNYIQLKS-----------TDGTYAYQLDPDIEQLG 828
Query: 770 TFKGYRSNHYVLALAVKQVLVHEVEKQRI 798
F G + L KQ++ EVE +R+
Sbjct: 829 NFPGIAGQN--LNYFGKQLVAREVELERM 855
>gi|326437038|gb|EGD82608.1| hypothetical protein PTSG_11986 [Salpingoeca sp. ATCC 50818]
Length = 1028
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 250/879 (28%), Positives = 404/879 (45%), Gaps = 139/879 (15%)
Query: 127 GDRVYVKISSSGVEERVKKLDVRAHSNS---LTSEPIDVLLQKVEQEAFNKALNSSSEGQ 183
G R Y+++ S + VR +SN L S P L ++V+Q + N S +
Sbjct: 230 GRRAYIRLRDSQLVR--PSFFVRDNSNRAAPLLSTPYTQLQEQVDQIMLRQIANESDDVD 287
Query: 184 SDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEE 243
+ + +LWVD+++P +T+L+SDE N+ +L WLK+WD VF +
Sbjct: 288 GSSAQENISTIDTRLWVDEFSPRRYTDLISDELVNKRLLYWLKRWDKTVFNRDPPP---- 343
Query: 244 VLSALRRHSTISQNKKQNDSSFTRKNRGNRWSN------GNFRNSNNLEYENSNSKGIQD 297
+ +Q+ N ++F +R SN G NSNN S GI +
Sbjct: 344 --------ALFAQSSTSNTTAFGGGGDNHRNSNFNNSNNGKPGNSNNGP-SIYRSDGIAE 394
Query: 298 SWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKI 357
GP + KV+LL GPPG+GKTTLAHV A+H GY VE+NASDDRS ++ +
Sbjct: 395 ---------GPEDAKVVLLAGPPGVGKTTLAHVVARHAGYATVEINASDDRSPDRLKQAV 445
Query: 358 LDVVQMNSVM-ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQ 416
LD QM V+ A+ RP CLV+DEIDGA AV +++++ E +
Sbjct: 446 LDATQMREVLSAEKRPNCLVLDEIDGAT---TSAVNAVIRII---------------EGK 487
Query: 417 PEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICN 476
++ K K +L RP+ICICNDL+A +LR+L++IA + F ++ +VSRL IC
Sbjct: 488 AKRGKGGKDSKGQTLKRPIICICNDLHATSLRNLKKIAYILHFHPIPMTSLVSRLDQICA 547
Query: 477 NESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFD 536
+ ++ LTTL E T+ DIR+C++TLQFL + ++ + + DI + VGRKD +
Sbjct: 548 QKQLRVERQVLTTLCELTDGDIRACISTLQFLAQNRKRVTLKDIRNTSVGRKDKVINVRT 607
Query: 537 IWKEIFQKRKTKRLR------------------NSVSSSSNVSNEFDFLHSLISNRGDYD 578
+W E+F + + R R S+S+ ++ + LI G+Y+
Sbjct: 608 VWTEVF-RLASHRSRPRSLLSSSSSSSSSSSSLLSMSARRAAGHKIGRILPLIEANGEYE 666
Query: 579 VIFDGIHENILQLQ---YHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAI 635
I G+ EN L ++ DP K + D L M I + QQ L Y A
Sbjct: 667 KIIFGLFENYLSIKGTTSFDPDFKKAMLVHDWLHFFQEMQLAIQQEQQYTLLRY-CSFAP 725
Query: 636 TVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKI-------PPYISRHLSTES 688
T L P+ +++ RY A E I ++ S I P++ R
Sbjct: 726 TAFHL--SFASPS----RTFIRYPKAIYETDAIMRTHRSTIQQLLADASPHMRRGQGERE 779
Query: 689 LVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNL 748
++I L+HI++ P LR +L ++ ++++V M +++L Y SD L
Sbjct: 780 FTVETIHRLMHIIN-PQLRISNAAVLRPSDRAVVSKIVGVMATHNLKYVEDVSD-----L 833
Query: 749 GNEVSHDVSTLSFDPPINEFITFKGYR------------SNHY-----VLALAVKQVLVH 791
G L +P ++E ++F + SN L VKQ++
Sbjct: 834 G-------MGLRLEPRVDEIVSFHNRQFDSRPSWAIHSESNEKPRQMPGLPPIVKQLVAR 886
Query: 792 EVEKQ---RIMQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTNNAAVSAKLIEKSKSL 848
E+ + R + +++ +A + + SKT + ++ + ++S
Sbjct: 887 ELATEFVRRQSAIIASRAQPMAAAPSASPQPSSSVSSKTTQSGSDVKENKHQAQKQSPPK 946
Query: 849 PYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDRFRKLSGKVSQDN 908
P +++ + LD + VKP++ K+ F G+V +D+
Sbjct: 947 PKTQEEKDAFLKARMGLDIDK----KVKPEAKARVKRDF-------------FGRVIEDD 989
Query: 909 DNAVQKATVERDSLPL-LFKFNEGFTNAVKRPVRMRDFL 946
+ A ++ L L LFKF+EG +NAV+RPVR+RD L
Sbjct: 990 PQQQRAAEAKKSKLSLVLFKFHEGSSNAVRRPVRLRDLL 1028
>gi|13623635|gb|AAH06437.1| CHTF18 protein, partial [Homo sapiens]
Length = 1016
Score = 284 bits (727), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 192/562 (34%), Positives = 284/562 (50%), Gaps = 52/562 (9%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LWVD++AP +TELLSD+ TNR +L WLK WD VFG E S + ++
Sbjct: 322 LWVDEFAPRHYTELLSDDFTNRCLLKWLKLWDLVVFGHERPSR--------KPRPSVEPA 373
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
+ +++ K W S+ E G+ S P+QKV LLC
Sbjct: 374 RVSKEATAPGK-----W------KSHEQVLEEMLEAGLDPSQR--------PKQKVALLC 414
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM-ADSRPKCLV 376
GPPGLGKTTLAHV A+H GY VVE+NASDDRS +I QM SV+ A +P CLV
Sbjct: 415 GPPGLGKTTLAHVIARHAGYSVVEMNASDDRSPEVFRTRIEAATQMESVLGAGGKPNCLV 474
Query: 377 IDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVI 436
IDEIDGA A+ V+L +++ + + A P +++ + L+RP+I
Sbjct: 475 IDEIDGA---PVAAINVLLSILNRKGPQEVGPQGPAV---PSGGGRRRRAEGGLLMRPII 528
Query: 437 CICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTEC 496
CICND +AP+LR L+Q A + F SR+V RL+ + + M+ L L E T+
Sbjct: 529 CICNDQFAPSLRQLKQQAFLLHFPPTLPSRLVQRLQEVSLRQGMRADPGVLAALCEKTDN 588
Query: 497 DIRSCLNTLQFL-DKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLR---- 551
DIR+C+NTLQFL + + L+V D+ + VG KD R F +W+E+FQ + +R R
Sbjct: 589 DIRACINTLQFLYSRGQRELSVRDVQATRVGLKDQRRGLFSVWQEVFQLPRAQRRRVGQD 648
Query: 552 ------------NSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVML 599
S ++ S F + ++ G+++ + G+ +N L+L+ D +
Sbjct: 649 PALPADTLLLGDGDAGSLTSASQRFYRVLHAAASAGEHEKVVQGLFDNFLRLRLRDSSLG 708
Query: 600 KTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYR 659
LD L DL+ +Q L Y P L + H L + P + +P S Q +
Sbjct: 709 AVCVALDWLAFDDLLAGAAHHSQSFQLLRYPPFLPVAFHVLFASSHTPRITFPSSQQEAQ 768
Query: 660 NAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEK 719
N + ++ ++ S I P +R +T + LL + P LRPV+ L S +EK
Sbjct: 769 NRMSQMRNLIQTLVSGIAP-ATRSRATPQALLLDALCLLLDILAPKLRPVSTQLYSTREK 827
Query: 720 NDLAQLVSAMVSYSLTYKNTKS 741
LA LV M++YSLTY+ ++
Sbjct: 828 QQLASLVGTMLAYSLTYRQERT 849
>gi|119606113|gb|EAW85707.1| CTF18, chromosome transmission fidelity factor 18 homolog (S.
cerevisiae), isoform CRA_d [Homo sapiens]
Length = 1003
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 192/562 (34%), Positives = 284/562 (50%), Gaps = 52/562 (9%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LWVD++AP +TELLSD+ TNR +L WLK WD VFG E S + ++
Sbjct: 309 LWVDEFAPRHYTELLSDDFTNRCLLKWLKLWDLVVFGHERPSR--------KPRPSVEPA 360
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
+ +++ K W S+ E G+ S P+QKV LLC
Sbjct: 361 RVSKEATAPGK-----W------KSHEQVLEEMLEAGLDPSQR--------PKQKVALLC 401
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM-ADSRPKCLV 376
GPPGLGKTTLAHV A+H GY VVE+NASDDRS +I QM SV+ A +P CLV
Sbjct: 402 GPPGLGKTTLAHVIARHAGYSVVEMNASDDRSPEVFRTRIEAATQMESVLGAGGKPNCLV 461
Query: 377 IDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVI 436
IDEIDGA A+ V+L +++ + + A P +++ + L+RP+I
Sbjct: 462 IDEIDGA---PVAAINVLLSILNRKGPQEVGPQGPAV---PSGGGRRRRAEGGLLMRPII 515
Query: 437 CICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTEC 496
CICND +AP+LR L+Q A + F SR+V RL+ + + M+ L L E T+
Sbjct: 516 CICNDQFAPSLRQLKQQAFLLHFPPTLPSRLVQRLQEVSLRQGMRADPGVLAALCEKTDN 575
Query: 497 DIRSCLNTLQFL-DKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLR---- 551
DIR+C+NTLQFL + + L+V D+ + VG KD R F +W+E+FQ + +R R
Sbjct: 576 DIRACINTLQFLYSRGQRELSVRDVQATRVGLKDQRRGLFSVWQEVFQLPRAQRRRVGQD 635
Query: 552 ------------NSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVML 599
S ++ S F + ++ G+++ + G+ +N L+L+ D +
Sbjct: 636 PALPADTLLLGDGDAGSLTSASQRFYRVLHAAASAGEHEKVVQGLFDNFLRLRLRDSSLG 695
Query: 600 KTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYR 659
LD L DL+ +Q L Y P L + H L + P + +P S Q +
Sbjct: 696 AVCVALDWLAFDDLLAGAAHHSQSFQLLRYPPFLPVAFHVLFASSHTPRITFPSSQQEAQ 755
Query: 660 NAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEK 719
N + ++ ++ S I P +R +T + LL + P LRPV+ L S +EK
Sbjct: 756 NRMSQMRNLIQTLVSGIAP-ATRSRATPQALLLDALCLLLDILAPKLRPVSTQLYSTREK 814
Query: 720 NDLAQLVSAMVSYSLTYKNTKS 741
LA LV M++YSLTY+ ++
Sbjct: 815 QQLASLVGTMLAYSLTYRQERT 836
>gi|328785578|ref|XP_001122463.2| PREDICTED: chromosome transmission fidelity protein 18 homolog
[Apis mellifera]
Length = 875
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 242/837 (28%), Positives = 388/837 (46%), Gaps = 143/837 (17%)
Query: 119 LPVTAPSGGDRVYVKISSSGVEERVKKLDVRAHSNSLTSEPIDVLLQKVEQEAFNKALNS 178
+ VT P R+Y+++ S+ E+ K ++ + SN L S P + + E+ A+ +
Sbjct: 173 VAVTRPCDAQRIYIRVKSN--EQCEIKRNIHSISN-LLSVPFSQIKAEAEEIMVQNAMRA 229
Query: 179 SSEGQSDRSLPEKPVVHE-QLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEI 237
S E LP + + +LWVDKY P S+ ELLSDE NR++L WLK WD VF
Sbjct: 230 SRETSY---LPNTNIAQDDELWVDKYKPRSYIELLSDESVNRDLLHWLKLWDKIVF---- 282
Query: 238 RSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQD 297
+ +Q KK+ +S+ NR+ N F I +
Sbjct: 283 -------------NRNYTQKKKKLNSTL------NRFKNRKF---------------IDE 308
Query: 298 SWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKI 357
K+ + G P Q+++LL GPPGLGKTTLAH+AAKH GY+V+E+NASD+RS T +
Sbjct: 309 KTFKEVDNKGFPIQRIVLLSGPPGLGKTTLAHLAAKHAGYNVIEINASDERSPDTFRQIL 368
Query: 358 LDVVQMNSVM-ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQ 416
L QM +VM +D RP CL++DEIDGA +++++LK + + + + +
Sbjct: 369 LASTQMKAVMGSDPRPNCLILDEIDGAPA---ASIDLLLKFIQGK---------LIPKGK 416
Query: 417 PEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICN 476
+K++ K RP+ICICN+ Y P+LR+LR +A + + S +R+ RL I
Sbjct: 417 KDKMNTDKSSNICH--RPIICICNEPYTPSLRALRTVALIISVPEVSSTRLADRLMEISQ 474
Query: 477 NESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFD 536
E++K + AL TL E + CDIRSCL LQ++ +N D S KD + FD
Sbjct: 475 KENLKVNPDALLTLVEISGCDIRSCLGALQYMGG----INSKDNLS--FALKDSRKGLFD 528
Query: 537 IWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDP 596
WK+I + S ++S + +++ N G+ + + GI N ++ +
Sbjct: 529 SWKQILTIPMNR------SGILSISERIRLVLNIVQN-GELEKLAQGIFHNYPEICNNK- 580
Query: 597 VMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQ 656
+ CL D + + Q + Y +T H ++ + L +P
Sbjct: 581 -LYYIALCLQWFQFFDEILSLVANLQVWSVMPYLNYAFVTWHLYFAKSRNAKLFYP---- 635
Query: 657 RYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLV-EDSISPLLHILSPPTLRPVALHLLS 715
+ + +M+ + + I I R S++ I+P L LR V+ HL S
Sbjct: 636 ----SILYEMNQKHARNIGILSTIQRSSGRNSIILTIDIAPFFPDLLSSRLRTVSGHLHS 691
Query: 716 AKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYR 775
KEK D++++V+ ++++ LT+ K + ++D DP I E F +
Sbjct: 692 MKEKEDISRIVNILINFGLTFTQEKKL--------DGTYD---YKLDPNIFEISIFPNCK 740
Query: 776 SNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTNNA 835
H L VKQ+LV E+E +R+ + A+ K ++ +K E+A N
Sbjct: 741 Y-HRTLTYPVKQILVQELEAERLRRA--------ANAIK---NVTKCTQNKNENAIKENT 788
Query: 836 AVSAK--LIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSF 893
++K L+ K+ CN + +++S + T +K K F
Sbjct: 789 TTNSKEDLVTKT--------CNN-----IISIESKEAQTKEIKYK-------------DF 822
Query: 894 FDRFRKLSGKVSQDNDNAVQKATVERDSL----PLLFKFNEGFTNAVKRPVRMRDFL 946
F R VSQD N K T+ + + FK+ EGF+NAV+R V M D L
Sbjct: 823 FGRV----ITVSQDKQNKYDKETISSQTFLSKNDVWFKYKEGFSNAVRRKVIMEDLL 875
>gi|410266580|gb|JAA21256.1| CTF18, chromosome transmission fidelity factor 18 homolog [Pan
troglodytes]
Length = 975
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 194/563 (34%), Positives = 289/563 (51%), Gaps = 54/563 (9%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LWVD++AP +TELLSD+ TNR +L WLK WD VFG + A + ++
Sbjct: 281 LWVDEFAPRYYTELLSDDFTNRCLLKWLKLWDLVVFGHQ--------RPARKPRPSVEPA 332
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
+ +++ K W S+ E G+ S P QKV LLC
Sbjct: 333 RVSKEATAPGK-----W------KSHEQVLEEMLEAGLDPSQR--------PRQKVALLC 373
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM-ADSRPKCLV 376
GPPGLGKTTLAHV A+H GY VVE+NASDDRS +I QM SV+ A +P CLV
Sbjct: 374 GPPGLGKTTLAHVIARHAGYSVVEMNASDDRSPELFRTRIEAATQMESVLGAGGKPNCLV 433
Query: 377 IDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVI 436
IDEIDGA A+ V+L +++ + + A P +++ + L+RP+I
Sbjct: 434 IDEIDGA---PVAAINVLLSILNRKGPQEVGPQGPAV---PSGGGRRRRAEGGLLMRPII 487
Query: 437 CICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTEC 496
CICND +AP+LR L+Q A + F SR+V RL+ + + M+ L L E T+
Sbjct: 488 CICNDQFAPSLRQLKQQAFLLHFPPTLPSRLVQRLQEVSLRQGMRADPGVLAALCEKTDN 547
Query: 497 DIRSCLNTLQFL-DKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLR---- 551
DIR+C+NTLQFL + + L+V D+ + VG KD R F +W+E+FQ + +R R
Sbjct: 548 DIRACINTLQFLYSRGQRELSVRDVQATRVGLKDQRRGLFSVWQEVFQLPRAQRRRVGQD 607
Query: 552 -------------NSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVM 598
++ S +S + LH+ S G+++ + G+ +N L+L+ D +
Sbjct: 608 PALPADTLLLGDGDAGSLTSTSQRFYRVLHAAASA-GEHEKVVQGLFDNFLRLRLRDSSL 666
Query: 599 LKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRY 658
LD L DL+ +Q L Y P L + H L + P + +P S Q
Sbjct: 667 GAVCVALDWLAFDDLLAGAAHHSQSFQLLRYPPFLPVAFHVLFASSHTPRITFPSSQQEA 726
Query: 659 RNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKE 718
+N + ++ ++ S I P + ++L+ D++ L IL+ P LRPV+ L S +E
Sbjct: 727 QNRMSQMRNLIQTLVSGIAPAARSRATPQALLLDALCLFLDILA-PKLRPVSTQLYSTRE 785
Query: 719 KNDLAQLVSAMVSYSLTYKNTKS 741
K LA LV M++YSLTY+ ++
Sbjct: 786 KQQLASLVGTMLAYSLTYRQERT 808
>gi|27501458|ref|NP_071375.1| chromosome transmission fidelity protein 18 homolog [Homo sapiens]
gi|74751544|sp|Q8WVB6.1|CTF18_HUMAN RecName: Full=Chromosome transmission fidelity protein 18 homolog;
Short=hCTF18; AltName: Full=CHL12
gi|17390405|gb|AAH18184.1| CTF18, chromosome transmission fidelity factor 18 homolog (S.
cerevisiae) [Homo sapiens]
gi|119606112|gb|EAW85706.1| CTF18, chromosome transmission fidelity factor 18 homolog (S.
cerevisiae), isoform CRA_c [Homo sapiens]
gi|119606117|gb|EAW85711.1| CTF18, chromosome transmission fidelity factor 18 homolog (S.
cerevisiae), isoform CRA_c [Homo sapiens]
Length = 975
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 191/562 (33%), Positives = 283/562 (50%), Gaps = 52/562 (9%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LWVD++AP +TELLSD+ TNR +L WLK WD VFG E +
Sbjct: 281 LWVDEFAPRHYTELLSDDFTNRCLLKWLKLWDLVVFGHE------------------RPS 322
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
+K S + + G +++ + E G+ S P+QKV LLC
Sbjct: 323 RKPRPSVEPARVSKEATAPGKWKSHEQV-LEEMLEAGLDPSQR--------PKQKVALLC 373
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM-ADSRPKCLV 376
GPPGLGKTTLAHV A+H GY VVE+NASDDRS +I QM SV+ A +P CLV
Sbjct: 374 GPPGLGKTTLAHVIARHAGYSVVEMNASDDRSPEVFRTRIEAATQMESVLGAGGKPNCLV 433
Query: 377 IDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVI 436
IDEIDGA A+ V+L +++ + + A P +++ + L+RP+I
Sbjct: 434 IDEIDGA---PVAAINVLLSILNRKGPQEVGPQGPAV---PSGGGRRRRAEGGLLMRPII 487
Query: 437 CICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTEC 496
CICND +AP+LR L+Q A + F SR+V RL+ + + M+ L L E T+
Sbjct: 488 CICNDQFAPSLRQLKQQAFLLHFPPTLPSRLVQRLQEVSLRQGMRADPGVLAALCEKTDN 547
Query: 497 DIRSCLNTLQFL-DKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLR---- 551
DIR+C+NTLQFL + + L+V D+ + VG KD R F +W+E+FQ + +R R
Sbjct: 548 DIRACINTLQFLYSRGQRELSVRDVQATRVGLKDQRRGLFSVWQEVFQLPRAQRRRVGQD 607
Query: 552 ------------NSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVML 599
S ++ S F + ++ G+++ + G+ +N L+L+ D +
Sbjct: 608 PALPADTLLLGDGDAGSLTSASQRFYRVLHAAASAGEHEKVVQGLFDNFLRLRLRDSSLG 667
Query: 600 KTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYR 659
LD L DL+ +Q L Y P L + H L + P + +P S Q +
Sbjct: 668 AVCVALDWLAFDDLLAGAAHHSQSFQLLRYPPFLPVAFHVLFASSHTPRITFPSSQQEAQ 727
Query: 660 NAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEK 719
N + ++ ++ S I P +R +T + LL + P LRPV+ L S +EK
Sbjct: 728 NRMSQMRNLIQTLVSGIAP-ATRSRATPQALLLDALCLLLDILAPKLRPVSTQLYSTREK 786
Query: 720 NDLAQLVSAMVSYSLTYKNTKS 741
LA LV M++YSLTY+ ++
Sbjct: 787 QQLASLVGTMLAYSLTYRQERT 808
>gi|392573390|gb|EIW66530.1| hypothetical protein TREMEDRAFT_34848, partial [Tremella
mesenterica DSM 1558]
Length = 696
Score = 283 bits (725), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 206/683 (30%), Positives = 321/683 (46%), Gaps = 101/683 (14%)
Query: 149 RAHSNSLTSEPIDVLLQKVE-----QEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKY 203
R + L S P+ LL +VE Q+A E + +KP +WVDKY
Sbjct: 32 RVGLDGLLSTPLHHLLVEVEELKSKQKALELQRRYDDEHLQAQGGSKKPTQAPSMWVDKY 91
Query: 204 APNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDS 263
P F++LL +++ +REVL WLK+WD CVF RR ++Q KK+
Sbjct: 92 RPKKFSDLLGEDRVHREVLGWLKEWDKCVF---------------RR---VTQVKKRR-- 131
Query: 264 SFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLG 323
F NL + G P ++LLL GPPG G
Sbjct: 132 ---------------FDEQENLPID----------------PLGRPRDRILLLSGPPGYG 160
Query: 324 KTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-DSRPKCLVIDEIDG 382
KTTLAH+ AK GY +E+NASDDRS++T+ ++I + + S ++ RP C+VIDEIDG
Sbjct: 161 KTTLAHIVAKQAGYKTLEINASDDRSAATVTSRIKNAIDAGSGLSSQGRPTCVVIDEIDG 220
Query: 383 ALGDGKGA-VEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICND 441
A G G + + ++K++ +D P + +K L RP+ICICND
Sbjct: 221 ASGGGDTSFIRSLVKLI---------------QDVPAR--RKNNVPAKPLRRPIICICND 263
Query: 442 LYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSC 501
LYA ALR LR A++ F +P VV RL+ IC+ E++ LT L + T D+RSC
Sbjct: 264 LYASALRPLRPFARIIRFRKPQAQFVVKRLREICDKEALSADLRVLTNLVDVTAGDVRSC 323
Query: 502 LNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVS 561
LNTLQF+ + I+ I + VG KD S W +F K+ R + +
Sbjct: 324 LNTLQFIKSRSSIVTDEAIRTSSVGLKDSGTSLQSTWNSLFIPLAAKQRRK--AQGIDDG 381
Query: 562 NEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRT 621
D L + + + G+YD + G+ E+ L+ D + VK D + D + +
Sbjct: 382 KYVDRLVNEVQSCGEYDRLVQGMWEHYPNLKPIDSSLENIVKLNDWVAYHDYLAGRVGEH 441
Query: 622 QQMPLYVYQP--PLAITVHRLVSQIQKPNLEWPKS-YQRYRNAFMEKMDIFKSWHSKIPP 678
Q+ L Y P +A H S EWPK+ Y+ Y+ A + +I S + IPP
Sbjct: 442 QEFELMGYMPYGIVAWYGHMASSANNTKLTEWPKADYEAYQ-ARLGNEEIATSLKNVIPP 500
Query: 679 YISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKN 738
+ S + + + I L+ I+SPP L+PV +++ + EK L +LV ++ L +
Sbjct: 501 ILRSLFSPTTTMTELIPLLMRIISPP-LKPVNANIVKSAEKAVLTRLVDLLIPLGLRFWQ 559
Query: 739 TKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLA-LAVKQVLVHEVEKQR 797
K+D + + +PPI+ F+ ++G R++ + AV+Q++ ++ +
Sbjct: 560 EKAD-----------NGQPMMRLEPPIDVFVHYEGKRADDIAASRFAVRQLVAQAMDAEI 608
Query: 798 IMQVTI-------GKSEHLADGY 813
+ + G +E LA Y
Sbjct: 609 ARRKGVVEDGQSAGTAESLAGMY 631
>gi|321264352|ref|XP_003196893.1| sister chromatid cohesion-related protein [Cryptococcus gattii
WM276]
gi|317463371|gb|ADV25106.1| sister chromatid cohesion-related protein, putative [Cryptococcus
gattii WM276]
Length = 887
Score = 283 bits (724), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 205/687 (29%), Positives = 339/687 (49%), Gaps = 113/687 (16%)
Query: 134 ISSSGVEERVKKLDVRAHSNSLTSEPIDVLLQKV-EQEAFNKALNSS-SEGQSDRSLPEK 191
IS +++RV K ++ L + P+ LL +V E ++ KAL E + R + E+
Sbjct: 198 ISPLELQQRVGK----GNAGELLTVPLHKLLDQVDELKSREKALQPKIDESRLQRQIDEE 253
Query: 192 PVVHEQ------LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVL 245
++ +WVDKY P FT+LL +++ +REV+ WLK+WD CVF
Sbjct: 254 EGQTKEIQMGMTMWVDKYRPKRFTDLLGEDRVHREVMSWLKEWDKCVF------------ 301
Query: 246 SALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRS 305
+R T Q KK+ ++ S+SK
Sbjct: 302 ---KRQRT--QAKKR-------------------------PFDASDSKPF------AVDP 325
Query: 306 TGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMN- 364
G P ++VLLL GPPG GKTTLA V A H GY ++E+NASDDRS T++ +I + ++
Sbjct: 326 LGRPHERVLLLSGPPGYGKTTLASVVAHHAGYRILEINASDDRSYQTVQTRIRNAIEAGT 385
Query: 365 SVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVS---AERKSNTAKENVAKEDQPEKIS 421
S+ A+ +P C+V+DE+DGA G G ++ ++K++ A RKS+T P K+
Sbjct: 386 SLGAEGKPTCVVVDEVDGAGGGESGFIKALIKLIQDAPARRKSST----------PAKL- 434
Query: 422 KKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMK 481
L RP+ICICND+YAPALR LR A++ F +P +V RL+ IC E ++
Sbjct: 435 ---------LRRPIICICNDIYAPALRPLRPYARIIRFRKPQAQSLVVRLRDICQREGLQ 485
Query: 482 TSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEI 541
+ +L TL E T D+RSCLNTLQF+ + ++ I + +G KD S + WK +
Sbjct: 486 ADTRSLNTLVEMTSGDVRSCLNTLQFIKSRSPVVTEEAIRATSLGLKDTSTTLQTAWKAL 545
Query: 542 FQKRKTKRLRNSVSSSSNVSNE--FDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVML 599
F K+ R + N+ + + +I++ G+YD + G E+ L+ D M
Sbjct: 546 FVPLAAKKRR----AQGNIDDTRYLPRIIPIINSCGEYDKLLLGAFEHYPNLKPLDGTMK 601
Query: 600 KTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQP-PLAITVHRLVSQ--IQKPNLEWPKS-Y 655
K + L SD + + Q+ L Y P + L SQ KP ++PK+ Y
Sbjct: 602 NLTKVHEWLAFSDRLQARVTSEQEWELLGYIPWGVGAWYPHLASQGNSSKPT-DYPKADY 660
Query: 656 QRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLS 715
+ Y+ + ++ +++ + +PP + T + + + I L+ I+SPP L+PV +++
Sbjct: 661 EAYQTRSSNE-EVARAFMNVLPPILRSMFITNTTLTELIPFLMRIISPP-LKPVNANIVK 718
Query: 716 AKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYR 775
EK L +LV M+ LT+ K++ + T+ +P I+ F+ + G R
Sbjct: 719 PAEKAVLQRLVELMIPLGLTFYKEKAE-----------NGQPTMRLEPAIDVFVYYDGKR 767
Query: 776 -----SNHYVLALAVKQVLVHEVEKQR 797
++ +++ + Q + E+ ++R
Sbjct: 768 AEDILASRFMIRQLISQAMDAELARRR 794
>gi|384499715|gb|EIE90206.1| hypothetical protein RO3G_14917 [Rhizopus delemar RA 99-880]
Length = 817
Score = 283 bits (723), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 196/625 (31%), Positives = 320/625 (51%), Gaps = 89/625 (14%)
Query: 197 QLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQ 256
+LWVD+Y P ++++L D+ REVL W+KQWD CVF ++ + A+R++ Q
Sbjct: 174 ELWVDRYRPKTYSDLTGDQSLFREVLKWVKQWDYCVF-RKLPPQETQRDKAMRQYEDARQ 232
Query: 257 NKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLL 316
QN F R + + +N ++ PE+K+LLL
Sbjct: 233 ---QNTRRFRR-----------------FDPQETNDPLLR------------PEKKILLL 260
Query: 317 CGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS------ 370
GPPG GKTT+AHV A+ GY+++E+NASDDR+ ++ KI ++M +++ D+
Sbjct: 261 SGPPGFGKTTVAHVMARMAGYNIIEINASDDRTGDVVKTKIKSALEMQAIIRDANSSETG 320
Query: 371 --------RPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISK 422
+P ++IDEIDG + I ++V +A + + SK
Sbjct: 321 ERTMTMNQKPNLVIIDEIDGVSSKSGNSDSFISQLV-----------QLATVEIGGEQSK 369
Query: 423 KKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKT 482
K K+ LLRP+ICICND+YAPALR LR IA+V F + + V RL IC NE ++T
Sbjct: 370 KSKQKQKPLLRPIICICNDVYAPALRPLRSIAQVMHFREVPMITVAKRLGEICENEGLET 429
Query: 483 SSIALTTLAEYTECDIRSCLNTLQFLDKKKEIL--NVMDIGSQVVGRKDMSRSAFDIWKE 540
L LAE + D+RSC+NTLQ++ + N+++ G +G+KD ++ F IW+
Sbjct: 430 DLGTLRMLAETADGDLRSCINTLQYIRSTSRVFTKNMLNDGG--IGKKDSNQYLFSIWEN 487
Query: 541 IFQKRKTKRLRNSVSSSSNVSNEF-DFLHSLISNRGDYDVIFDGIHENILQLQYHDPVML 599
IF K+ S+SS ++ D L I++ G+ + I G HE+ +++HD M
Sbjct: 488 IFCTPKS-----SISSRVEDQGKYVDRLVQAITSNGEIERIMQGCHESYPLMRFHDVAME 542
Query: 600 KTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLV--SQIQKPNLEWPK-SYQ 656
K V+ + D ++ I Q+ LY Y P A+ HR + Q+ +E+PK YQ
Sbjct: 543 KCVQMNEWFDFYDQINNRINERQEYDLYKYLPYPAVNFHRFFAGTTTQEHRVEYPKVDYQ 602
Query: 657 RY--RNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLL 714
Y + +F +D+F + I P R+L+ + + + L++I+S P ++ L
Sbjct: 603 VYSAKKSFENLIDMF---LAGIKPTKRRYLNRNIVANELVPHLMYIIS-PEMKQANKTLF 658
Query: 715 SAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGY 774
A+EK LA+LV+ M+ Y L+Y + K+ G V L +PP+ +F+ F+
Sbjct: 659 KAEEKAMLARLVNTMIDYGLSYVSEKTKE-----GQIV------LKLEPPVEQFLYFELS 707
Query: 775 RSNHYV-LALAVKQVLVHEVEKQRI 798
+ + AV+Q++ E+E++ I
Sbjct: 708 KPKSLLPRQYAVRQLIASEIEEELI 732
>gi|119606110|gb|EAW85704.1| CTF18, chromosome transmission fidelity factor 18 homolog (S.
cerevisiae), isoform CRA_a [Homo sapiens]
Length = 1004
Score = 283 bits (723), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 192/562 (34%), Positives = 284/562 (50%), Gaps = 52/562 (9%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LWVD++AP +TELLSD+ TNR +L WLK WD VFG E S + ++
Sbjct: 281 LWVDEFAPRHYTELLSDDFTNRCLLKWLKLWDLVVFGHERPSR--------KPRPSVEPA 332
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
+ +++ K W S+ E G+ S P+QKV LLC
Sbjct: 333 RVSKEATAPGK-----W------KSHEQVLEEMLEAGLDPSQR--------PKQKVALLC 373
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM-ADSRPKCLV 376
GPPGLGKTTLAHV A+H GY VVE+NASDDRS +I QM SV+ A +P CLV
Sbjct: 374 GPPGLGKTTLAHVIARHAGYSVVEMNASDDRSPEVFRTRIEAATQMESVLGAGGKPNCLV 433
Query: 377 IDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVI 436
IDEIDGA A+ V+L +++ + + A P +++ + L+RP+I
Sbjct: 434 IDEIDGA---PVAAINVLLSILNRKGPQEVGPQGPAV---PSGGGRRRRAEGGLLMRPII 487
Query: 437 CICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTEC 496
CICND +AP+LR L+Q A + F SR+V RL+ + + M+ L L E T+
Sbjct: 488 CICNDQFAPSLRQLKQQAFLLHFPPTLPSRLVQRLQEVSLRQGMRADPGVLAALCEKTDN 547
Query: 497 DIRSCLNTLQFL-DKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLR---- 551
DIR+C+NTLQFL + + L+V D+ + VG KD R F +W+E+FQ + +R R
Sbjct: 548 DIRACINTLQFLYSRGQRELSVRDVQATRVGLKDQRRGLFSVWQEVFQLPRAQRRRVGQD 607
Query: 552 ------------NSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVML 599
S ++ S F + ++ G+++ + G+ +N L+L+ D +
Sbjct: 608 PALPADTLLLGDGDAGSLTSASQRFYRVLHAAASAGEHEKVVQGLFDNFLRLRLRDSSLG 667
Query: 600 KTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYR 659
LD L DL+ +Q L Y P L + H L + P + +P S Q +
Sbjct: 668 AVCVALDWLAFDDLLAGAAHHSQSFQLLRYPPFLPVAFHVLFASSHTPRITFPSSQQEAQ 727
Query: 660 NAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEK 719
N + ++ ++ S I P +R +T + LL + P LRPV+ L S +EK
Sbjct: 728 NRMSQMRNLIQTLVSGIAP-ATRSRATPQALLLDALCLLLDILAPKLRPVSTQLYSTREK 786
Query: 720 NDLAQLVSAMVSYSLTYKNTKS 741
LA LV M++YSLTY+ ++
Sbjct: 787 QQLASLVGTMLAYSLTYRQERT 808
>gi|393220220|gb|EJD05706.1| P-loop containing nucleoside triphosphate hydrolase protein
[Fomitiporia mediterranea MF3/22]
Length = 729
Score = 282 bits (722), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 194/612 (31%), Positives = 301/612 (49%), Gaps = 81/612 (13%)
Query: 191 KPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRR 250
KPV +E LWVD+Y P+ F +LL DE+ +R+ + WLK+WD CVFG +R
Sbjct: 186 KPVDNE-LWVDRYRPSRFIDLLGDERVHRDTMSWLKEWDHCVFG--------------KR 230
Query: 251 HSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPE 310
+ K N++ F +N +YE D++H+ P
Sbjct: 231 KAVNKHRKANNNTGFNSEN----------------QYE--------DAFHR-------PR 259
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS 370
+K+LLL GP G GKTTLAHV A+ GY V+E+NASD RS I+++I ++ S +
Sbjct: 260 EKLLLLSGPAGYGKTTLAHVIARQAGYEVMEINASDSRSGQVIDDRIRPTLESGSAVGSK 319
Query: 371 RPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKAS 430
RP C+VIDEIDGA G G+ I K++ D +K KK K
Sbjct: 320 RPVCVVIDEIDGATGSGENTSTFIHKLIGL------------TFDSAKKGRKKDNNAKRP 367
Query: 431 LLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTL 490
LLRP+ICICNDLYA +L LRQ A++ F +P+ + + RL+ IC E ++ S ALTTL
Sbjct: 368 LLRPIICICNDLYAASLTKLRQHARIIRFQRPADAFLTKRLRSICEMEGLRAESRALTTL 427
Query: 491 AEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRL 550
D+R CLNTLQF+ +++ + I + VG K+ S + +F KR+
Sbjct: 428 VGIARGDMRGCLNTLQFVKARQQEVTESVIRAATVGMKEGDSSFTSVMSSLFSPLAKKRV 487
Query: 551 RNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGN 610
+ S + S L + I G D + G E+ L++++ + + K + L +
Sbjct: 488 KELGMSEYDESRYVSRLSADIDTTGSADKVALGCFEHYANLRHYEASLSRHGKAANWLVS 547
Query: 611 SDLMHQYIMRTQQ----MPLYVYQ--PPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFME 664
D + MR+++ MP Y P A+ R S++++P +W + N +
Sbjct: 548 FDSLSG-AMRSEREYSLMPYLSYSLVPFYALFNERGGSKVERPKADWDALMKTRTNEEIY 606
Query: 665 KMDIFKSWHSKIPPYIS-RHLSTESLVEDSISPLLH-ILSPPTLRPVALHLLSAKEKNDL 722
K + K S Y R+ + +++ ++P ++ ILSPP +RPV + E+ L
Sbjct: 607 K-SLAKCIQSAGQRYAGLRYFLSNEIMQLELAPYINRILSPP-MRPVNRQVTKPHERALL 664
Query: 723 AQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYR-SNHYVL 781
++LV MV++ L + K++ T +PPI+ FIT+ G R S+ V
Sbjct: 665 SRLVDIMVAFELRFVQEKAE-----------DGQLTFRLEPPIDAFITYDGRRASDIAVQ 713
Query: 782 ALAVKQVLVHEV 793
A +QV+ EV
Sbjct: 714 RYATRQVIAGEV 725
>gi|410328981|gb|JAA33437.1| CTF18, chromosome transmission fidelity factor 18 homolog [Pan
troglodytes]
Length = 975
Score = 282 bits (722), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 193/563 (34%), Positives = 285/563 (50%), Gaps = 54/563 (9%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LWVD++AP +TELLSD+ TNR +L WLK WD VFG + A + ++
Sbjct: 281 LWVDEFAPRYYTELLSDDFTNRCLLKWLKLWDLVVFGHQ--------RPARKPRPSVEPA 332
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
+ +++ K W S+ E G+ S P QKV LLC
Sbjct: 333 RVSKEATAPGK-----W------KSHEQVLEEMLEAGLDPSQR--------PRQKVALLC 373
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM-ADSRPKCLV 376
GPPGLGKTTLAHV A+H GY VVE+NASDDRS +I QM SV+ A +P CLV
Sbjct: 374 GPPGLGKTTLAHVIARHAGYSVVEMNASDDRSPELFRTRIEAATQMESVLGAGGKPNCLV 433
Query: 377 IDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVI 436
IDEIDGA A+ V+L +++ + + A P +++ + L+RP+I
Sbjct: 434 IDEIDGA---PVAAINVLLSILNRKGPQEVGPQGPAV---PSGGGRRRRAEGGLLMRPII 487
Query: 437 CICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTEC 496
CICND +AP+LR L+Q A + F SR+V RL+ + + M+ L L E T+
Sbjct: 488 CICNDQFAPSLRQLKQQAFLLHFPPTLPSRLVQRLQEVSLRQGMRADPGVLAALCEKTDN 547
Query: 497 DIRSCLNTLQFL-DKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLR---- 551
DIR+C+NTLQFL + + L+V D+ + VG KD R F +W+E+FQ + +R R
Sbjct: 548 DIRACINTLQFLYSRGQRELSVRDVQATRVGLKDQRRGLFSVWQEVFQLPRAQRRRVGQD 607
Query: 552 -------------NSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVM 598
++ S +S + LH+ S G+++ + G+ +N L+L+ D +
Sbjct: 608 PALPADTLLLGDGDAGSLTSTSQRFYRVLHAAASA-GEHEKVVQGLFDNFLRLRLRDSSL 666
Query: 599 LKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRY 658
LD L DL+ +Q L Y P L + H L + P + +P S Q
Sbjct: 667 GAVCVALDWLAFDDLLAGAAHHSQSFQLLRYPPFLPVAFHVLFASSHTPRITFPSSQQEA 726
Query: 659 RNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKE 718
+N + ++ ++ S I P +R +T + LL + P LRPV+ L S +E
Sbjct: 727 QNRMSQMRNLIQTLVSGIAP-AARSRATPQALLLDALCLLLDILAPKLRPVSTQLYSTRE 785
Query: 719 KNDLAQLVSAMVSYSLTYKNTKS 741
K LA LV M++YSLTY+ ++
Sbjct: 786 KQQLASLVGTMLAYSLTYRQERT 808
>gi|397474851|ref|XP_003808870.1| PREDICTED: chromosome transmission fidelity protein 18 homolog [Pan
paniscus]
Length = 975
Score = 282 bits (722), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 193/563 (34%), Positives = 285/563 (50%), Gaps = 54/563 (9%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LWVD++AP +TELLSD+ TNR +L WLK WD VFG + A + ++
Sbjct: 281 LWVDEFAPRYYTELLSDDFTNRCLLKWLKLWDLVVFGHQ--------RPARKPRPSVEPA 332
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
+ +++ K W S+ E G+ S P QKV LLC
Sbjct: 333 RVSKEATAPGK-----W------KSHEQVLEEMLEAGLDPSQR--------PRQKVALLC 373
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM-ADSRPKCLV 376
GPPGLGKTTLAHV A+H GY VVE+NASDDRS +I QM SV+ A +P CLV
Sbjct: 374 GPPGLGKTTLAHVIARHAGYSVVEMNASDDRSPELFRTRIEAATQMESVLGAGGKPNCLV 433
Query: 377 IDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVI 436
IDEIDGA A+ V+L +++ + + A P +++ + L+RP+I
Sbjct: 434 IDEIDGA---PVAAINVLLSILNRKGPQEVGPQGPAV---PSGGGRRRRAEGGLLMRPII 487
Query: 437 CICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTEC 496
CICND +AP+LR L+Q A + F SR+V RL+ + + M+ L L E T+
Sbjct: 488 CICNDQFAPSLRQLKQQAFLLHFPPTLPSRLVQRLQEVSLRQGMRADPGVLAALCEKTDN 547
Query: 497 DIRSCLNTLQFL-DKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLR---- 551
DIR+C+NTLQFL + + L+V D+ + VG KD R F +W+E+FQ + +R R
Sbjct: 548 DIRACINTLQFLYSRGQRELSVRDVQATRVGLKDQRRGLFSVWQEVFQLPRAQRRRVGQD 607
Query: 552 -------------NSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVM 598
++ S +S + LH+ S G+++ + G+ +N L+L+ D +
Sbjct: 608 PALPADTLLLGDGDAGSLTSTSQRFYRVLHAAASA-GEHEKVVQGLFDNFLRLRLRDSSL 666
Query: 599 LKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRY 658
LD L DL+ +Q L Y P L + H L + P + +P S Q
Sbjct: 667 GAVCVALDWLAFDDLLAGAAHHSQSFQLLRYPPFLPVAFHVLFASSHTPRITFPSSQQEA 726
Query: 659 RNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKE 718
+N + ++ ++ S I P +R +T + LL + P LRPV+ L S +E
Sbjct: 727 QNRMSQMRNLIQTLVSGIAP-AARSRATPQALLLDALCLLLDILAPKLRPVSTQLYSTRE 785
Query: 719 KNDLAQLVSAMVSYSLTYKNTKS 741
K LA LV M++YSLTY+ ++
Sbjct: 786 KQQLASLVGTMLAYSLTYRQERT 808
>gi|403273596|ref|XP_003928592.1| PREDICTED: chromosome transmission fidelity protein 18 homolog,
partial [Saimiri boliviensis boliviensis]
Length = 846
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 209/634 (32%), Positives = 311/634 (49%), Gaps = 77/634 (12%)
Query: 145 KLDVRAHSNSLTSEPIDV-----LLQKVEQEAFNKALNSSSEGQSDRS----LPEKPVVH 195
+LD+ S + E +D+ LLQ+ +Q + L+S G+ + + PE+ +
Sbjct: 136 QLDLLGVSFASLKEQVDIERRRQLLQEAQQ--LSDTLHSLRSGEEETAQPLGAPEEELAA 193
Query: 196 EQ------LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSE--IRSTSEEVLSA 247
Q LWVD++AP +TELLSD+ TNR +L WLK WD VFG E R V A
Sbjct: 194 SQDAAPHCLWVDEFAPRHYTELLSDDFTNRCLLKWLKLWDLVVFGHERPARKPRPSVEPA 253
Query: 248 LRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTG 307
I+ K W S+ + +++ S
Sbjct: 254 RASKEAIAPGK---------------W--------------KSHEQVLEEMLEAGLDSCQ 284
Query: 308 PPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM 367
P KV LLCGPPGLGKTTLAHV A+H GY VVE+NASDDRS +I QM SV+
Sbjct: 285 RPRHKVALLCGPPGLGKTTLAHVIARHAGYSVVEMNASDDRSPEVFRTRIEAATQMESVL 344
Query: 368 -ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGC 426
A +P CLVIDEIDGA A+ V+L +++ RK E + QP +S +
Sbjct: 345 GASGKPNCLVIDEIDGA---PVAAISVLLSILN--RKGPQEAE---LQGQPVPLSGGRRR 396
Query: 427 KKAS--LLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSS 484
+ L+RP+ICICND + P+LR L+Q A + F SR+V RL+ + ++
Sbjct: 397 RAEGGLLMRPIICICNDQFVPSLRQLKQQAFLLHFPPTLPSRLVQRLQEVSLRRGLRADP 456
Query: 485 IALTTLAEYTECDIRSCLNTLQFLDKKKEI-LNVMDIGSQVVGRKDMSRSAFDIWKEIFQ 543
AL L E T+ DIR+C+NTLQFL + + L+V D+ + VG KD R F +W+E+FQ
Sbjct: 457 GALAALCEKTDNDIRACINTLQFLHSQGQRELSVRDVRATRVGLKDQRRGLFSVWQEVFQ 516
Query: 544 KRKTKRLR----------------NSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHEN 587
+ +R R S ++ S F + ++ G+++ + G+ +N
Sbjct: 517 LPRAQRRRVGQDPALPADTLLLGDGDAGSLTSASQRFYHVLHAAASTGEHEKVVQGLFDN 576
Query: 588 ILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKP 647
L+L+ D + LD L DL+ + +Q L Y P L + H L + P
Sbjct: 577 FLRLRLRDSSLGAVCTALDWLAFDDLLARAAHHSQSFQLLRYPPFLPVAFHVLFASSHTP 636
Query: 648 NLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLR 707
+ +P S Q ++ + ++ ++ S I P +R +T + LL + P LR
Sbjct: 637 RITFPSSQQEAQSRMSQMRNLIQTLVSGIVP-ATRSRATPQALLLDALCLLLDILAPKLR 695
Query: 708 PVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKS 741
PV+ L S +EK LA LV M++YSLTY+ ++
Sbjct: 696 PVSTQLYSVREKQQLASLVGTMLAYSLTYRQERT 729
>gi|345481692|ref|XP_001603491.2| PREDICTED: chromosome transmission fidelity protein 18 homolog
[Nasonia vitripennis]
Length = 912
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 252/851 (29%), Positives = 380/851 (44%), Gaps = 147/851 (17%)
Query: 121 VTAPSGGDRVYVKISSSGVEERVKKLDVRAHSNSLTSEPIDVLLQKVEQEAFNKALNSSS 180
VT +R Y+K+S KK D + + L S + K++ EA + L ++
Sbjct: 184 VTRSEDAERFYIKVSE-------KKYDPKKYQ--LKSGSLLKSFDKLKDEA-EEILIKNT 233
Query: 181 EGQSDRSLPEKPV----VHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSE 236
E S SL +PV ++ +LWVDKY P + ELLSDE NR +L WLK WD VF
Sbjct: 234 EKASVLSL--EPVSTENINSELWVDKYRPKRYVELLSDENVNRSLLYWLKLWDKVVFD-- 289
Query: 237 IRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQ 296
R T+ + KK N S FRN K IQ
Sbjct: 290 -------------REPTVHR-KKSNVVS-------------KFRN-----------KFIQ 311
Query: 297 DSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENK 356
S G P Q++ LL GPPGLGKTTLAHVAA+H GY++VE+NASDDR
Sbjct: 312 KEDIPDHDSKGFPTQRIALLTGPPGLGKTTLAHVAARHAGYNIVELNASDDRGPEAFREA 371
Query: 357 ILDVVQMNSVM-ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKED 415
+L QM +++ D RP CL++DEIDGA ++E++LK + + K
Sbjct: 372 LLASTQMRALIDQDRRPNCLILDEIDGA---PTASIELLLKFIHGKLAPK------GKNA 422
Query: 416 QPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHIC 475
+P K S GC+ RP+ICICNDLY P+LR LR +A V + + S + RL I
Sbjct: 423 KPGKQS--DGCR-----RPIICICNDLYTPSLRPLRAMALVINVPEITPSNLTERLSEIM 475
Query: 476 NNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAF 535
E ++ S L LAE + CD+R+CL LQ+ ++ + +G KDM + F
Sbjct: 476 RKEGLQVDSRLLLQLAEKSACDVRACLGILQYTGGGANMIQNL-----ALGLKDMRKGLF 530
Query: 536 DIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHD 595
D WKE+ Q T+R +N + I +G+ D + GI N ++
Sbjct: 531 DSWKELLQVPMTRR-----GPLTNTERALKVIK--IVYQGEPDRLAQGIFHNYPEICKDK 583
Query: 596 PVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSY 655
M+ + L+ D ++ +M Q L Y + H ++ Q P + +P +
Sbjct: 584 --MISISEALNWFEFYDTVNTLVMERQTWMLMPYTTSPFVAWHLYLAISQPPKISYPSAV 641
Query: 656 QRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLS 715
N +E+ + K + + ++LV D + L I+S P LR V + L S
Sbjct: 642 FE-ANQKLERNKAILTVTKK-----TSKIDMDTLVTDVLPFLPDIIS-PRLRSVNVQLYS 694
Query: 716 AKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYR 775
KEK +L +LV+ M+ + L++ K E ++ DP I + TF G +
Sbjct: 695 PKEKAELEKLVNVMLDFGLSFVQEKRP--------EGGYEY---LIDPNIWDIGTFPGCK 743
Query: 776 SNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTNNA 835
L AVKQ+++ E+E R+ + I E L D +S K++N
Sbjct: 744 IRR-PLTYAVKQIVIQELESARLRRAAIYNGEAL--------------DKDGKSKKSSNK 788
Query: 836 AVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSR-SSTASVKPKSSGDTKKSFRSSSSFF 894
SA S + + PS S + D + + PK +K+ + +FF
Sbjct: 789 PASA-----GPSKKVADELEPSLSQSSSKSDEGLPNHLKQLNPKELEPSKE--KKCRNFF 841
Query: 895 DRFRKLSGKVSQD-----------NDNAVQKATVERDSL--------PLLFKFNEGFTNA 935
F+ L + + N V+K RD+ + F++ EG+TNA
Sbjct: 842 QAFQALGQEKLKAKLAKEKELGIVNTKMVEKEEQRRDAKRKKDLLKSDVWFQYKEGYTNA 901
Query: 936 VKRPVRMRDFL 946
V+R + M+DFL
Sbjct: 902 VRRTILMKDFL 912
>gi|157786594|ref|NP_001099243.1| chromosome transmission fidelity protein 18 homolog [Rattus
norvegicus]
gi|149052127|gb|EDM03944.1| CTF18, chromosome transmission fidelity factor 18 homolog (S.
cerevisiae) (predicted) [Rattus norvegicus]
Length = 968
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 243/781 (31%), Positives = 363/781 (46%), Gaps = 118/781 (15%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LWVD++AP +TELLSD+ TNR +L WLK WD VFG E A + +
Sbjct: 274 LWVDEFAPQHYTELLSDDFTNRCLLKWLKLWDLVVFGHE--------RPARKPRPGVEPT 325
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
+ ++ K W + LE E S+ P QKV LLC
Sbjct: 326 RVGKEAPAPGK-----WKSHEQVLEEMLEAELDPSRR--------------PRQKVALLC 366
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM-ADSRPKCLV 376
GPPGLGKTTLAHV A+H GY VVE+NASDDRS +I QM SV+ A RP CLV
Sbjct: 367 GPPGLGKTTLAHVVARHAGYCVVEMNASDDRSPEAFRTRIEAATQMESVLGAGGRPNCLV 426
Query: 377 IDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVI 436
IDEIDGA A+ V+L +++ RK E +++ + L RP+I
Sbjct: 427 IDEIDGA---PTAAINVLLSILN--RKGPQEAEQGGTAVA-AAGGRRRRAEGGLLTRPII 480
Query: 437 CICNDLYAPALRSLRQIAKVHVFIQPSV-SRVVSRLKHICNNESMKTSSIALTTLAEYTE 495
CICND + P+LR L+Q A + + + P++ SR+V RL+ I M++ AL L E T+
Sbjct: 481 CICNDQFTPSLRQLKQQALL-LHVPPTLPSRLVQRLQEISLQHGMRSDPGALAALCEKTD 539
Query: 496 CDIRSCLNTLQFL-DKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKR----- 549
DIR+C+NTLQFL + + L+V D+ + VG KD + F +W+E+FQ + +R
Sbjct: 540 NDIRACINTLQFLYGRGQRELSVKDVQTTHVGLKDQRKGLFSVWQEVFQLPRAQRRLVGQ 599
Query: 550 ----------LRNSVSSSSNVSNE-FDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVM 598
L +S S ++++ F + + ++ G+++ + G+ +N L+L+ D
Sbjct: 600 DLMLPTHALLLNDSDKGSLTLASQRFYHILRVTTSAGEHEKVVQGLFDNFLRLRLRD-SS 658
Query: 599 LKTVKC-LDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQR 657
L TV C LD L DL+ Q Q L Y P L H L + P + +P S Q
Sbjct: 659 LGTVCCALDWLAFDDLLEQAAHHGQSFQLLRYLPFLPAAFHVLFASSHVPRITFPSSQQE 718
Query: 658 YRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAK 717
+ + + ++ S + P +R +T + LL + P LRPV+ L SA+
Sbjct: 719 AQTRLSQTRNHIQTLVSGMAP-ATRSRATPQALVLDTLCLLLDVLSPKLRPVSTQLYSAR 777
Query: 718 EKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTL-SFDPPINEFITFKGYRS 776
EK L+ LV M++YSLTY E + D L +P + E F +
Sbjct: 778 EKQQLSSLVGTMLAYSLTYH------------QERTPDGQYLYRLEPNVEEVCRFPELPA 825
Query: 777 NHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLA---DGYKENMDLAGEEDSKTESAKTN 833
L KQ++ E+E +++ ++E LA G + + +G + +T+S
Sbjct: 826 RK-PLTYQAKQLIAREIEMEKMW-----RAEALAWTGGGPQVDQGPSGPANLRTDSG--- 876
Query: 834 NAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSF 893
EK P R ++ A+V+ + D F
Sbjct: 877 ---------EKGTRQPAPRNHEQRLEHIM--------KRAAVQEQPERD----------F 909
Query: 894 FDR--FRKLS------GKVSQDNDNAVQKATVERDSLPLLFKFNEGFTNAVKRPVRMRDF 945
F R RK++ +D D V R + F+FNEG +NAV+R + +RD
Sbjct: 910 FGRVVIRKVAVPSKEVEAPQKDTDEWRMGVAVGRSE--VWFRFNEGVSNAVRRSLYIRDL 967
Query: 946 L 946
L
Sbjct: 968 L 968
>gi|111226983|ref|XP_001134625.1| AAA ATPase domain-containing protein [Dictyostelium discoideum AX4]
gi|90971299|gb|EAS66959.1| AAA ATPase domain-containing protein [Dictyostelium discoideum AX4]
Length = 937
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 202/607 (33%), Positives = 301/607 (49%), Gaps = 84/607 (13%)
Query: 197 QLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQ 256
+LWVDKYAP SF +LLSD N EVL WL+ WD VF + + ++ +
Sbjct: 162 RLWVDKYAPTSFHDLLSDTTMNLEVLNWLELWDHIVFDKPLSKNLIMPSTFNNNNNNNNN 221
Query: 257 NKKQNDSSFTRKNRGNRWSNGNFRNSNNLEY---ENSNSKGIQDSWHKKTRSTGPPEQKV 313
N N+++ N+ + + G + N N ++ NSN + Q+ + G P K+
Sbjct: 222 NNNNNNNNNNNNNKNSSSTGGGYFNKFNSKFTTSSNSNQQH-QNQGQYLLQEDGTPIAKI 280
Query: 314 LLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPK 373
+LL G PGLGKTTLAHV AK Y+ VE+NAS+DRS E+K+L ++M S+ D++P
Sbjct: 281 ILLTGGPGLGKTTLAHVLAKQANYNPVEINASEDRSGEAFESKLLSAIEMKSLFNDNKPN 340
Query: 374 CLVIDEIDGALGDGKGAVEVILKMV------SAERKSNT---AKENVAKEDQPEKISKKK 424
CL+IDEIDG G G +E+++K++ +KS T AK++ K+ + +
Sbjct: 341 CLIIDEIDGISGRDNGPIELLIKLIDNSLKLGNHKKSTTNPAAKKSAGKDTESDDDDDDD 400
Query: 425 GCKKAS---------------------------LLRPVICICNDLYAPALRSLRQIAKVH 457
LLRP+ICICND Y P+LR LRQ A V
Sbjct: 401 DDDDDDHEDQDEDDEKSTKTKGKKGKKKGFTTRLLRPIICICNDQYVPSLRKLRQKAMVF 460
Query: 458 VFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILN- 516
F P + ++SRLK IC+NE + + L L + T DIR+C+N+LQF+ K +LN
Sbjct: 461 DFQAPKKNDLLSRLKVICSNEGLSATDATLNALIDMTGSDIRACINSLQFIKSKTTVLNS 520
Query: 517 --VMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEF---------- 564
+ + + V+G+KDM + +IW IF+ +S++SS+N +++
Sbjct: 521 ELLKNKSNIVIGQKDMEKGLVEIWNNIFK-------SSSITSSTNKLSKYSNTISSSSSS 573
Query: 565 ---------DFLHSL---ISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSD 612
D+L+ L I D + DG++EN L D M KT+ CLD + D
Sbjct: 574 IDSINSISNDYLNQLDFQIGACNQVDKLIDGVYENYLTNMSSDYTMQKTMDCLDWMVFGD 633
Query: 613 LMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEK--MDIFK 670
M + Y PLAI H+ S P ++ P S Y N +K +I
Sbjct: 634 QM----LNVHADEKYRSLVPLAI--HQRCSTYS-PKIQLPHS--DYDNFIKKKSNSNIKD 684
Query: 671 SWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMV 730
S++S +P I +L+ + V D I P + ILS P +R + L S EK +L +LV M
Sbjct: 685 SFYSDLPATIYSYLTKKCFVIDFIYPFVDILSLP-VRVTNVQLYSQTEKTNLNRLVEIMK 743
Query: 731 SYSLTYK 737
Y L+YK
Sbjct: 744 FYRLSYK 750
>gi|296083464|emb|CBI23422.3| unnamed protein product [Vitis vinifera]
Length = 221
Score = 276 bits (707), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 136/167 (81%), Positives = 148/167 (88%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSR 371
++LLLCGPPGLGKTTLAHVAAKHCGY VVE+NASDDRSSS IE KILDVVQMNSVMADS+
Sbjct: 38 QILLLCGPPGLGKTTLAHVAAKHCGYRVVEINASDDRSSSIIEAKILDVVQMNSVMADSK 97
Query: 372 PKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASL 431
P CLVIDEIDGALGDGKGAVEVILKMVS ERK++ K NVAK D+ +IS KKG K ASL
Sbjct: 98 PNCLVIDEIDGALGDGKGAVEVILKMVSIERKADNRKGNVAKVDELGQISSKKGHKTASL 157
Query: 432 LRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNE 478
RPVICICNDLYAPALR L Q+AKVH+F+QP VSRVVSRLK+ICN E
Sbjct: 158 SRPVICICNDLYAPALRPLHQVAKVHIFVQPIVSRVVSRLKYICNME 204
>gi|157951666|ref|NP_663384.2| chromosome transmission fidelity protein 18 homolog [Mus musculus]
gi|26346861|dbj|BAC37079.1| unnamed protein product [Mus musculus]
gi|148690490|gb|EDL22437.1| CTF18, chromosome transmission fidelity factor 18 homolog (S.
cerevisiae), isoform CRA_a [Mus musculus]
Length = 969
Score = 276 bits (706), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 236/778 (30%), Positives = 360/778 (46%), Gaps = 113/778 (14%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LWVD++AP +TELLSD+ TNR +L WLK WD VFG E A + +
Sbjct: 276 LWVDEFAPQHYTELLSDDFTNRCLLKWLKLWDLVVFGRE--------RPARKPRPGVETT 327
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
+ +++ K W S+ + +++ + + P QKV LLC
Sbjct: 328 RVGKEATAPGK-----W--------------KSHEQALEEMLEAELDPSQRPRQKVALLC 368
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-DSRPKCLV 376
GPPGLGKTTLAHV A+H GY VVE+NASDDRS +I QM SV+ RP CLV
Sbjct: 369 GPPGLGKTTLAHVVARHAGYCVVEMNASDDRSPEAFRTRIEAATQMESVLGVGGRPNCLV 428
Query: 377 IDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVI 436
IDEIDGA A+ V+L +++ RK + ++ + L RP+I
Sbjct: 429 IDEIDGA---PTAAINVLLGILN--RKGPQEADQGGTAVAAGGRRRRA--EGGLLTRPII 481
Query: 437 CICNDLYAPALRSLRQIAKVHVFIQPSV-SRVVSRLKHICNNESMKTSSIALTTLAEYTE 495
CICND + P+LR L+Q A + + + P++ SR+V RL+ I M++ AL L E T+
Sbjct: 482 CICNDQFTPSLRQLKQQALL-LHVPPTLPSRLVQRLQEISLQHGMRSDPGALVALCEKTD 540
Query: 496 CDIRSCLNTLQFL-DKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKR----- 549
DIR+C+NTLQFL + + L+V + + VG KD + F +W+E+FQ +T+R
Sbjct: 541 NDIRACINTLQFLYGRGRRELSVKAVQTTHVGLKDQRKGLFSVWQEVFQLPRTQRRIVGQ 600
Query: 550 ----------LRNSVSSSSNVSNE-FDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVM 598
L N S ++++ F + + ++ G+++ + G+ +N L+L+ D
Sbjct: 601 DLMLPAHALLLSNGDKGSLTLASQRFYHILRVTTSAGEHEKVVQGLFDNFLRLRLRD-SS 659
Query: 599 LKTVKC-LDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQR 657
L TV C LD L DL+ Q R Q L Y P + H L + P + +P S Q
Sbjct: 660 LSTVCCALDWLAFDDLLEQAAHRGQSFQLLCYLPFVPAAFHVLFASSHVPRITFPSSQQE 719
Query: 658 YRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAK 717
+ + + ++ S + P +R +T + LL + P LRPV+ L SA
Sbjct: 720 AQTRMSQTRNHIQTLVSGMAP-TTRSRATPQALVLDTLCLLLDVLAPKLRPVSTQLYSAH 778
Query: 718 EKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTL-SFDPPINEFITFKGYRS 776
EK L+ LV M++YSLTY E + D L +P + E F +
Sbjct: 779 EKQQLSCLVGTMLAYSLTYH------------QERTPDGQYLYKLEPNVEEVCRFPELPA 826
Query: 777 NHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTNNAA 836
L KQ++ E+E +++ ++E LA + + + A+
Sbjct: 827 RK-PLTYQAKQLIAREIEMEKMR-----RAEALA---------WARSGPQVDQGSSGPAS 871
Query: 837 VSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDR 896
+ EK P R ++T A+V+ + D FF R
Sbjct: 872 LWTDSGEKGTRQPVPRNHEQRLEHIMT--------RATVQEQPERD----------FFGR 913
Query: 897 --FRKLS------GKVSQDNDNAVQKATVERDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
RK++ +D D V R + F+FNEG +NAV+R + +RD L
Sbjct: 914 VVIRKVAVPSREVEAPQKDADEWRMGVAVGRSE--VWFRFNEGVSNAVRRSLYIRDLL 969
>gi|91088941|ref|XP_973644.1| PREDICTED: similar to cutlet CG33122-PA [Tribolium castaneum]
Length = 771
Score = 276 bits (706), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 193/606 (31%), Positives = 289/606 (47%), Gaps = 91/606 (15%)
Query: 196 EQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTIS 255
++LWVD Y P + ELLSDE TNR +L WLK WD VF + ++
Sbjct: 219 KELWVDLYKPRKYFELLSDESTNRIMLRWLKLWDKAVFKRRPK---------IKPIKPAE 269
Query: 256 QNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLL 315
+NKK F+ + + + + + HK GP
Sbjct: 270 KNKKM------------------FKAPDLCTDLDEHGRPL----HKIALLCGP------- 300
Query: 316 LCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM-ADSRPKC 374
PGLGKTTLAH+ A+H GY+VVEVNASDDRS + + + QM SV+ + RP C
Sbjct: 301 ----PGLGKTTLAHMVARHAGYNVVEVNASDDRSCEAFKTALENATQMRSVVDQERRPNC 356
Query: 375 LVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRP 434
LV DEIDGA +++ ++K V Q +KK ++ L RP
Sbjct: 357 LVFDEIDGA---PPSSIDYLVKFV-----------------QGGPSGRKKQKERNVLKRP 396
Query: 435 VICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYT 494
+ICICND+Y PALR LRQIA V F S +R+ RL I + +KT A+ LAE +
Sbjct: 397 IICICNDVYVPALRPLRQIAFVVNFPPTSNTRLAERLMEIAKWQKVKTDMGAMLALAEKS 456
Query: 495 ECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIF--QKRKTKRLRN 552
+ DIR+CL+ L F + + + + D+ VG+KD+ + F +W++IF K L+
Sbjct: 457 QNDIRACLSVLHFFKSQDKAVTLSDVHKTSVGQKDIQKGIFSVWRDIFLIDKANGDSLKA 516
Query: 553 SVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSD 612
+S NV N F GDY+ I G+ EN L++ + M++T LD G SD
Sbjct: 517 RMSGVLNVVNAF----------GDYEKIAQGVFENYPNLKFKNTSMVETCLALDWFGFSD 566
Query: 613 LMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSW 672
++++ I TQ L Y P + H L++P + R + I
Sbjct: 567 IVNKSIYSTQNYNLGSYLPFACVVWHFAFGSRSWQKLQYPSAGYEARTKQNRQKAIVNEL 626
Query: 673 HSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSY 732
+ P I H+ SL+ D I PLL + P R ++LHL + +EK L +V MV Y
Sbjct: 627 MRGMQPAIRSHVQPNSLILD-ILPLLTTIITPAFRQISLHLYTEEEKKSLDNVVRIMVDY 685
Query: 733 SLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLALAVKQVLVHE 792
+L+Y ++ + +D DP I+E ++F +S L+ + KQ++ E
Sbjct: 686 NLSYVQERT--------ADGGYD---YKLDPNIDELVSFGPKKS----LSYSNKQLIAKE 730
Query: 793 VEKQRI 798
+E ++
Sbjct: 731 IETAKM 736
>gi|354478741|ref|XP_003501573.1| PREDICTED: chromosome transmission fidelity protein 18 homolog
[Cricetulus griseus]
Length = 1016
Score = 275 bits (704), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 250/826 (30%), Positives = 373/826 (45%), Gaps = 134/826 (16%)
Query: 153 NSLTSEPIDVLLQKVEQEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELL 212
+SL SE +D LL+ +E + GQ LWVD +AP +TELL
Sbjct: 293 HSLRSERVDALLEGTPEE-------DPAPGQH--------TTQHCLWVDAFAPQHYTELL 337
Query: 213 SDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGN 272
SD+ TNR +L WLK WD VFG E A + +I + +++ K
Sbjct: 338 SDDFTNRCLLKWLKLWDLVVFGHE--------RPARKARPSIEPTRIGKEATAPGK---- 385
Query: 273 RWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAA 332
W + +E + ++D R P KV +LCGPPGLGKTTLAHV A
Sbjct: 386 -WKS----------HEQVLEEMLEDELDPSRR----PRHKVAMLCGPPGLGKTTLAHVVA 430
Query: 333 KHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM-ADSRPKCLVIDEIDGALGDGKGAV 391
+H GY VVE+NASDDRS +I QM SV+ A RP CLVIDEIDGA A+
Sbjct: 431 RHAGYCVVEMNASDDRSPEAFRTRIEAATQMESVLGAGGRPNCLVIDEIDGA---STAAI 487
Query: 392 EVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLR 451
V+L +++ + + + A +++ + L RP+ICICND + P+LR L+
Sbjct: 488 NVLLSVLNRKGPQEAEQGDTAA----PAGGRRRRAEGGLLTRPIICICNDQFTPSLRQLK 543
Query: 452 QIAKVHVFIQPSV-SRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFL-D 509
Q A + + + P++ SR+V RL+ I M++ AL L E T+ DIR+C+NTLQFL
Sbjct: 544 QQAFL-LHVPPTLPSRLVQRLQEISLQHGMRSDPGALAALCEKTDNDIRACINTLQFLYG 602
Query: 510 KKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKR--------------LRNSVS 555
+ + L+V D+ + VG KD + F +W+E+FQ K +R L N
Sbjct: 603 RGRRELSVRDVQTTHVGLKDQRKGLFSVWQEVFQLPKAQRRVVGQDLILPTHALLLNDGD 662
Query: 556 SSSNVSNEFDFLHSL--ISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKC-LDCLGNSD 612
S F H L ++ G+++ + G+ +N L L+ D L TV C LD L D
Sbjct: 663 KGSLTLASQRFYHILRVTTSAGEHEKVVQGLFDNFLHLRLRD-SSLGTVCCALDWLAFDD 721
Query: 613 LMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSW 672
L+ Q Q L Y P L H L + P + +P S Q + + + ++
Sbjct: 722 LLEQAAHHGQSFQLLRYLPFLPAAFHVLFASSHVPRITFPSSQQEAQTRMSQTKNHIQTL 781
Query: 673 HSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSY 732
S + P +R +T + LL + P LRPV+ L SA+EK L+ LV M++Y
Sbjct: 782 VSGMAPS-TRSRATPQALVLDTLCLLLDVLAPKLRPVSTQLYSAREKQQLSSLVGTMLAY 840
Query: 733 SLTYKNTKSDPLLNNLGNEVSHDVSTL-SFDPPINEFITFKGYRSNHYVLALAVKQVLVH 791
SLTY E + D L +P + E F + L KQ++
Sbjct: 841 SLTYH------------QERTPDGQYLYRLEPNVEEVCRFPELPARK-PLTYQAKQLIAR 887
Query: 792 EVEKQRIMQVTIGKSEHLA---DGYKENMDLAGEEDSKTESAKTNNAAVSAKLIEKSKSL 848
E+E +++ ++E LA G + + +G +T+S +K
Sbjct: 888 EIEMEKMR-----RAEALALARGGPQVDQGPSGPASLQTDSG------------DKGVRQ 930
Query: 849 PYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDR--FRKL------ 900
P R ++ A V+ + D FF R R++
Sbjct: 931 PAPRNHEQRLEHIM--------KKAVVQEQPERD----------FFGRVVIRRVAVPSRE 972
Query: 901 SGKVSQDNDNAVQKATVERDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
+ +D D V R + F+FNEG +NAV+R + +RD L
Sbjct: 973 AEAPEKDTDEWRMGVAVGRSE--VWFRFNEGVSNAVRRSLYIRDLL 1016
>gi|270012364|gb|EFA08812.1| hypothetical protein TcasGA2_TC006507 [Tribolium castaneum]
Length = 821
Score = 275 bits (704), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 193/606 (31%), Positives = 289/606 (47%), Gaps = 91/606 (15%)
Query: 196 EQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTIS 255
++LWVD Y P + ELLSDE TNR +L WLK WD VF + ++
Sbjct: 219 KELWVDLYKPRKYFELLSDESTNRIMLRWLKLWDKAVFKRRPK---------IKPIKPAE 269
Query: 256 QNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLL 315
+NKK F+ + + + + + HK GP
Sbjct: 270 KNKKM------------------FKAPDLCTDLDEHGRPL----HKIALLCGP------- 300
Query: 316 LCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM-ADSRPKC 374
PGLGKTTLAH+ A+H GY+VVEVNASDDRS + + + QM SV+ + RP C
Sbjct: 301 ----PGLGKTTLAHMVARHAGYNVVEVNASDDRSCEAFKTALENATQMRSVVDQERRPNC 356
Query: 375 LVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRP 434
LV DEIDGA +++ ++K V Q +KK ++ L RP
Sbjct: 357 LVFDEIDGA---PPSSIDYLVKFV-----------------QGGPSGRKKQKERNVLKRP 396
Query: 435 VICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYT 494
+ICICND+Y PALR LRQIA V F S +R+ RL I + +KT A+ LAE +
Sbjct: 397 IICICNDVYVPALRPLRQIAFVVNFPPTSNTRLAERLMEIAKWQKVKTDMGAMLALAEKS 456
Query: 495 ECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIF--QKRKTKRLRN 552
+ DIR+CL+ L F + + + + D+ VG+KD+ + F +W++IF K L+
Sbjct: 457 QNDIRACLSVLHFFKSQDKAVTLSDVHKTSVGQKDIQKGIFSVWRDIFLIDKANGDSLKA 516
Query: 553 SVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSD 612
+S NV N F GDY+ I G+ EN L++ + M++T LD G SD
Sbjct: 517 RMSGVLNVVNAF----------GDYEKIAQGVFENYPNLKFKNTSMVETCLALDWFGFSD 566
Query: 613 LMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSW 672
++++ I TQ L Y P + H L++P + R + I
Sbjct: 567 IVNKSIYSTQNYNLGSYLPFACVVWHFAFGSRSWQKLQYPSAGYEARTKQNRQKAIVNEL 626
Query: 673 HSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSY 732
+ P I H+ SL+ D I PLL + P R ++LHL + +EK L +V MV Y
Sbjct: 627 MRGMQPAIRSHVQPNSLILD-ILPLLTTIITPAFRQISLHLYTEEEKKSLDNVVRIMVDY 685
Query: 733 SLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLALAVKQVLVHE 792
+L+Y ++ + +D DP I+E ++F +S L+ + KQ++ E
Sbjct: 686 NLSYVQERT--------ADGGYD---YKLDPNIDELVSFGPKKS----LSYSNKQLIAKE 730
Query: 793 VEKQRI 798
+E ++
Sbjct: 731 IETAKM 736
>gi|431906729|gb|ELK10850.1| Chromosome transmission fidelity protein 18 like protein [Pteropus
alecto]
Length = 984
Score = 275 bits (704), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 239/803 (29%), Positives = 366/803 (45%), Gaps = 115/803 (14%)
Query: 181 EGQSDRSLPEKPVVHEQ-----LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGS 235
E QS +L E+P + LWVDK+AP +TELLSD+ TNR +L WLK WD VFG
Sbjct: 260 EAQSLGALEEEPAKSQDDSQHCLWVDKFAPQHYTELLSDDFTNRCLLKWLKLWDLVVFGR 319
Query: 236 EIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGI 295
E A + ++ + +++ + K W + LE E S+
Sbjct: 320 E--------RPARKPRPSVEPVRVGKEATASSK-----WKSHEQVLEEMLEAELDPSQR- 365
Query: 296 QDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIEN 355
P QKV LLCGPPGLGKTTLAHV A+H GY VVE+NASDDRS
Sbjct: 366 -------------PRQKVALLCGPPGLGKTTLAHVIARHAGYCVVEMNASDDRSPEAFRT 412
Query: 356 KILDVVQMNSVM-ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKE 414
I QM SV+ A +P CLVIDEIDGA ++ V+L ++ + ++A
Sbjct: 413 HIEAATQMESVLGAGGKPNCLVIDEIDGA---PMASINVLLSIIDRKGPKEAEPGDLAV- 468
Query: 415 DQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHI 474
P +++ + L+RPVICICND +AP+LR L+Q A + F SR+V RL+ I
Sbjct: 469 --PAGRGRRRRAEGGLLMRPVICICNDQFAPSLRQLKQQAFLLHFPPTLPSRLVQRLQEI 526
Query: 475 CNNESMKTSSIALTTLAEYTECDIRSCLNTLQFL-DKKKEILNVMDIGSQVVGRKDMSRS 533
+ ++ L L E T+ DIR+C+NTLQFL + + L+V + + VG KD +
Sbjct: 527 SVRQGLQADPGVLAALCEKTDNDIRACINTLQFLHGQGQRELSVRAVQTTQVGVKDQRKG 586
Query: 534 AFDIWKEIFQKRKTKRLR------------------------NSVSSSSNVSNEFDFLHS 569
F +W+EIFQ + +R R + + + + F +
Sbjct: 587 LFSVWQEIFQLPRAQRRRVGQDPTLPTHMLLLGDGLTGWGPHAAEAPLTMAAQRFYHILH 646
Query: 570 LISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVY 629
+ ++ G+++ + G+ +N L+L+ D + LD L DL+ Q Q L Y
Sbjct: 647 VAASTGEHEKMVQGLFDNFLRLRLRDSSLGTVCVALDWLAFEDLLGQAAHHGQSFQLLRY 706
Query: 630 QPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESL 689
+P L H L + P + +P S Q +N ++ ++ S I P +R ++
Sbjct: 707 RPFLPAVFHVLFASSHVPRIAFPSSQQEAQNRISRVQNLIQTLVSGITP-ATRSQTSPQA 765
Query: 690 VEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLG 749
+ LL + P LRPV+ L S +EK L LV M++YSLTY+ ++ G
Sbjct: 766 LVLDTLCLLLDILVPKLRPVSTQLYSTREKLQLGSLVGTMLAYSLTYRQERTPD-----G 820
Query: 750 NEVSHDVSTLSFDPPINEFITFKGYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHL 809
V +P + E F + L KQ++ HE+E +++ ++E L
Sbjct: 821 QYV------YRLEPNVEEVCRFPELPARK-PLTYQAKQLIAHEIEVEKMR-----RAEAL 868
Query: 810 ADGYKENMDLAGEEDSKTESAKTNNAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSR 869
A +++ + G KTES + + K P R +L
Sbjct: 869 ARD-RDSSQVDG-RPPKTESPQGDAGG-------KGIQPPTPRSHEQWLERIL------- 912
Query: 870 SSTASVKPKSSGDTKKSFRSSSSFFDR--FRKLSGKVSQDN----DNAVQKATVERDSLP 923
K + ++ R FF R RK + ++D D A ++
Sbjct: 913 --------KRAAQEDQAER---DFFGRVVVRKAAALSTEDTAPEVDAAERRMGTAVGRSD 961
Query: 924 LLFKFNEGFTNAVKRPVRMRDFL 946
+ F+F EG +NAV+R + +RD L
Sbjct: 962 VWFRFKEGVSNAVRRSLHIRDLL 984
>gi|344248287|gb|EGW04391.1| Chromosome transmission fidelity protein 18-like [Cricetulus
griseus]
Length = 968
Score = 275 bits (704), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 250/826 (30%), Positives = 373/826 (45%), Gaps = 134/826 (16%)
Query: 153 NSLTSEPIDVLLQKVEQEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELL 212
+SL SE +D LL+ +E + GQ LWVD +AP +TELL
Sbjct: 245 HSLRSERVDALLEGTPEE-------DPAPGQH--------TTQHCLWVDAFAPQHYTELL 289
Query: 213 SDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGN 272
SD+ TNR +L WLK WD VFG E A + +I + +++ K
Sbjct: 290 SDDFTNRCLLKWLKLWDLVVFGHE--------RPARKARPSIEPTRIGKEATAPGK---- 337
Query: 273 RWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAA 332
W + +E + ++D R P KV +LCGPPGLGKTTLAHV A
Sbjct: 338 -WKS----------HEQVLEEMLEDELDPSRR----PRHKVAMLCGPPGLGKTTLAHVVA 382
Query: 333 KHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM-ADSRPKCLVIDEIDGALGDGKGAV 391
+H GY VVE+NASDDRS +I QM SV+ A RP CLVIDEIDGA A+
Sbjct: 383 RHAGYCVVEMNASDDRSPEAFRTRIEAATQMESVLGAGGRPNCLVIDEIDGA---STAAI 439
Query: 392 EVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLR 451
V+L +++ + + + A +++ + L RP+ICICND + P+LR L+
Sbjct: 440 NVLLSVLNRKGPQEAEQGDTAA----PAGGRRRRAEGGLLTRPIICICNDQFTPSLRQLK 495
Query: 452 QIAKVHVFIQPSV-SRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFL-D 509
Q A + + + P++ SR+V RL+ I M++ AL L E T+ DIR+C+NTLQFL
Sbjct: 496 QQAFL-LHVPPTLPSRLVQRLQEISLQHGMRSDPGALAALCEKTDNDIRACINTLQFLYG 554
Query: 510 KKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKR--------------LRNSVS 555
+ + L+V D+ + VG KD + F +W+E+FQ K +R L N
Sbjct: 555 RGRRELSVRDVQTTHVGLKDQRKGLFSVWQEVFQLPKAQRRVVGQDLILPTHALLLNDGD 614
Query: 556 SSSNVSNEFDFLHSL--ISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKC-LDCLGNSD 612
S F H L ++ G+++ + G+ +N L L+ D L TV C LD L D
Sbjct: 615 KGSLTLASQRFYHILRVTTSAGEHEKVVQGLFDNFLHLRLRD-SSLGTVCCALDWLAFDD 673
Query: 613 LMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSW 672
L+ Q Q L Y P L H L + P + +P S Q + + + ++
Sbjct: 674 LLEQAAHHGQSFQLLRYLPFLPAAFHVLFASSHVPRITFPSSQQEAQTRMSQTKNHIQTL 733
Query: 673 HSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSY 732
S + P +R +T + LL + P LRPV+ L SA+EK L+ LV M++Y
Sbjct: 734 VSGMAPS-TRSRATPQALVLDTLCLLLDVLAPKLRPVSTQLYSAREKQQLSSLVGTMLAY 792
Query: 733 SLTYKNTKSDPLLNNLGNEVSHDVSTL-SFDPPINEFITFKGYRSNHYVLALAVKQVLVH 791
SLTY E + D L +P + E F + L KQ++
Sbjct: 793 SLTYH------------QERTPDGQYLYRLEPNVEEVCRFPELPARK-PLTYQAKQLIAR 839
Query: 792 EVEKQRIMQVTIGKSEHLA---DGYKENMDLAGEEDSKTESAKTNNAAVSAKLIEKSKSL 848
E+E +++ ++E LA G + + +G +T+S +K
Sbjct: 840 EIEMEKMR-----RAEALALARGGPQVDQGPSGPASLQTDSG------------DKGVRQ 882
Query: 849 PYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDR--FRKL------ 900
P R ++ A V+ + D FF R R++
Sbjct: 883 PAPRNHEQRLEHIM--------KKAVVQEQPERD----------FFGRVVIRRVAVPSRE 924
Query: 901 SGKVSQDNDNAVQKATVERDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
+ +D D V R + F+FNEG +NAV+R + +RD L
Sbjct: 925 AEAPEKDTDEWRMGVAVGRSE--VWFRFNEGVSNAVRRSLYIRDLL 968
>gi|190358841|sp|Q8BIW9.2|CTF18_MOUSE RecName: Full=Chromosome transmission fidelity protein 18 homolog
Length = 969
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 234/778 (30%), Positives = 359/778 (46%), Gaps = 113/778 (14%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LWVD++AP +TELLSD+ TNR +L WLK WD VFG E A + +
Sbjct: 276 LWVDEFAPQHYTELLSDDFTNRCLLKWLKLWDLVVFGRE--------RPARKPRPGVETT 327
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
+ +++ K W S+ + +++ + + P QKV LLC
Sbjct: 328 RVGKEATAPGK-----W--------------KSHEQALEEMLEAELDPSQRPRQKVALLC 368
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-DSRPKCLV 376
GPPGLGKTTLAHV A+H GY VVE+NASDDRS +I QM SV+ RP CLV
Sbjct: 369 GPPGLGKTTLAHVVARHAGYCVVEMNASDDRSPEAFRTRIEAATQMESVLGVGGRPNCLV 428
Query: 377 IDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVI 436
IDEIDGA A+ V+L +++ RK + ++ + L RP+I
Sbjct: 429 IDEIDGA---PTAAINVLLGILN--RKGPQEADQGGTAVAAGGRRRRA--EGGLLTRPII 481
Query: 437 CICNDLYAPALRSLRQIAKVHVFIQPSV-SRVVSRLKHICNNESMKTSSIALTTLAEYTE 495
CICND + P+LR L+Q A + + + P++ SR+V RL+ I M++ AL L E T+
Sbjct: 482 CICNDQFTPSLRQLKQQALL-LHVPPTLPSRLVQRLQEISLQHGMRSDPGALVALCEKTD 540
Query: 496 CDIRSCLNTLQFL-DKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKR----- 549
DIR+C+NTLQFL + + L+V + + VG KD + F +W+E+FQ +T+R
Sbjct: 541 NDIRACINTLQFLYGRGRRELSVKAVQTTHVGLKDQRKGLFSVWQEVFQLPRTQRRIVGQ 600
Query: 550 ----------LRNSVSSSSNVSNE-FDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVM 598
L N S ++++ F + + ++ G+++ + G+ +N L+L+ D
Sbjct: 601 DLMLPAHALLLSNGDKGSLTLASQRFYHILRVTTSAGEHEKVVQGLFDNFLRLRLRD-SS 659
Query: 599 LKTVKC-LDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQR 657
L TV C LD L DL+ Q R Q L Y P + H L + P + +P S Q
Sbjct: 660 LSTVCCALDWLAFDDLLEQAAHRGQSFQLLCYLPFVPAAFHVLFASSHVPRITFPSSQQE 719
Query: 658 YRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAK 717
+ + + ++ S + P +R +T + LL + P LRPV+ L SA
Sbjct: 720 AQTRMSQTRNHIQTLVSGMAP-TTRSRATPQALVLDTLCLLLDVLAPKLRPVSTQLYSAH 778
Query: 718 EKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTL-SFDPPINEFITFKGYRS 776
EK L+ LV M++YSLTY E + D L +P + E F +
Sbjct: 779 EKQQLSCLVGTMLAYSLTYH------------QERTPDGQYLYKLEPNVEEVCRFPELPA 826
Query: 777 NHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTNNAA 836
L KQ++ E+E +++ ++E LA + + + A+
Sbjct: 827 RK-PLTYQAKQLIAREIEMEKMR-----RAEALA---------WARSGPQVDQGSSGPAS 871
Query: 837 VSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDR 896
+ EK P R ++ + +T +P+ FF R
Sbjct: 872 LWTDSGEKGTRQPAPRNHEQRLEHIM------KRATVQEQPE------------RDFFGR 913
Query: 897 --FRKLS------GKVSQDNDNAVQKATVERDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
RK++ +D D V R + F+FNEG +NAV+R + +RD L
Sbjct: 914 VVIRKVAVPSREVEAPQKDADEWRMGVAVGRSE--VWFRFNEGVSNAVRRSLYIRDLL 969
>gi|18848361|gb|AAH24142.1| CTF18, chromosome transmission fidelity factor 18 homolog (S.
cerevisiae) [Mus musculus]
Length = 969
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 234/778 (30%), Positives = 359/778 (46%), Gaps = 113/778 (14%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LWVD++AP +TELLSD+ TNR +L WLK WD VFG E A + +
Sbjct: 276 LWVDEFAPQHYTELLSDDFTNRCLLKWLKLWDLVVFGRE--------RPARKPRPGVETT 327
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
+ +++ K W S+ + +++ + + P QKV LLC
Sbjct: 328 RVGKEATAPGK-----W--------------KSHEQALEEMLEAELDPSQRPRQKVALLC 368
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-DSRPKCLV 376
GPPGLGKTTLAHV A+H GY VVE+NASDDRS +I QM SV+ RP CLV
Sbjct: 369 GPPGLGKTTLAHVVARHAGYCVVEMNASDDRSPEAFRTRIEAATQMESVLGVGGRPNCLV 428
Query: 377 IDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVI 436
IDEIDGA A+ V+L +++ RK + ++ + L RP+I
Sbjct: 429 IDEIDGA---PTAAINVLLGILN--RKGPQEADQGGTAVAAGGRRRRA--EGGLLTRPII 481
Query: 437 CICNDLYAPALRSLRQIAKVHVFIQPSV-SRVVSRLKHICNNESMKTSSIALTTLAEYTE 495
CICND + P+LR L+Q A + + + P++ SR+V RL+ I M++ AL L E T+
Sbjct: 482 CICNDQFTPSLRQLKQQALL-LHVPPTLPSRLVQRLQEISLQHGMRSDPGALVALCEKTD 540
Query: 496 CDIRSCLNTLQFL-DKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKR----- 549
DIR+C+NTLQFL + + L+V + + VG KD + F +W+E+FQ +T+R
Sbjct: 541 NDIRACINTLQFLYGRGRRELSVKAVQTTHVGLKDQRKGLFSVWQEVFQLPRTQRRIVGQ 600
Query: 550 ----------LRNSVSSSSNVSNE-FDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVM 598
L N S ++++ F + + ++ G+++ + G+ +N L+L+ D
Sbjct: 601 DLMLPAHALLLSNGDKGSLTLASQRFYHILRVTTSAGEHEKVVQGLFDNFLRLRLRD-SS 659
Query: 599 LKTVKC-LDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQR 657
L TV C LD L DL+ Q R Q L Y P + H L + P + +P S Q
Sbjct: 660 LSTVCCALDWLAFDDLLEQAAHRGQSFQLLCYLPFVPAAFHVLFASSHVPRITFPSSQQE 719
Query: 658 YRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAK 717
+ + + ++ S + P +R +T + LL + P LRPV+ L SA
Sbjct: 720 AQTRMSQTRNHIQTLVSGMAP-TTRSRATPQALVLDTLCLLLDVLAPKLRPVSTQLYSAH 778
Query: 718 EKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTL-SFDPPINEFITFKGYRS 776
EK L+ LV M++YSLTY E + D L +P + E F +
Sbjct: 779 EKQQLSCLVGTMLAYSLTYH------------QERTPDGQYLYKLEPNVEEVCRFPELPA 826
Query: 777 NHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTNNAA 836
L KQ++ E+E +++ ++E LA + + + A+
Sbjct: 827 RK-PLTYQAKQLIAREIEMEKMR-----RAEALA---------WARSGPQVDQGSSGPAS 871
Query: 837 VSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDR 896
+ EK P R ++ + +T +P+ FF R
Sbjct: 872 LWTDSGEKETRQPAPRNHEQRLEHIM------KRATVQEQPE------------RDFFGR 913
Query: 897 --FRKLS------GKVSQDNDNAVQKATVERDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
RK++ +D D V R + F+FNEG +NAV+R + +RD L
Sbjct: 914 VVIRKVAVPSREVEAPQKDADEWRMGVAVGRSE--VWFRFNEGVSNAVRRSLYIRDLL 969
>gi|351711189|gb|EHB14108.1| Chromosome transmission fidelity protein 18-like protein
[Heterocephalus glaber]
Length = 980
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 211/667 (31%), Positives = 321/667 (48%), Gaps = 85/667 (12%)
Query: 125 SGGDRVYVKI----SSSGVE--------ERVKKLDVRAHSNSLTSEPIDV-----LLQKV 167
+GGDR ++ + + +GV+ R +LD+ S + + +D L+Q+
Sbjct: 182 TGGDRAFLVLHPDSTGTGVQSPLLDVRWRRPGRLDLLGISFASLKDQVDSERRQRLVQEA 241
Query: 168 EQ--EAFNKALNSSSEGQSDRSLPEKPVVHEQ-----LWVDKYAPNSFTELLSDEQTNRE 220
+Q + + + E Q R E+P + LWVD++AP +TELLSD+ TNR
Sbjct: 242 QQLSDILHSLRSEEEEAQGMRDPMEEPADGQDTSQHCLWVDEFAPQRYTELLSDDFTNRC 301
Query: 221 VLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFR 280
+L WLK WD VFG E S RK R N +
Sbjct: 302 LLKWLKLWDLVVFGHERPS---------------------------RKPRPNVEPARIGK 334
Query: 281 NSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVV 340
+ S + +++ + G P QKV LLCGPPGLGKTTLAHV A+H GY VV
Sbjct: 335 EATASGKWKSQEQVVEEMLEAELDPNGRPRQKVALLCGPPGLGKTTLAHVIARHAGYCVV 394
Query: 341 EVNASDDRSSSTIENKILDVVQMNSVMADS-RPKCLVIDEIDGALGDGKGAVEVILKMVS 399
E+NASDDRS +I QM SV+ S +P CLVIDEIDGA A+ V+L +++
Sbjct: 395 EMNASDDRSPEAFRTRIEAATQMESVLGTSGKPNCLVIDEIDGA---PTAAINVLLSILN 451
Query: 400 AERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICND---------LYAPALRSL 450
RK E P +++ + L RP+ICICND + P+LR L
Sbjct: 452 --RKGPQEAEP-GGPAVPLGGGRRRRTEGTLLTRPIICICNDHVATTQPFYRFTPSLRQL 508
Query: 451 RQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDK 510
+Q A + F SR+V RL+ I + M++ AL L E + DIR+C+NTLQ
Sbjct: 509 KQQAFLLHFPPTLPSRLVQRLQEISLQQGMQSDPGALAALCEKADNDIRACINTLQVRRG 568
Query: 511 KKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQ-KRKTKRLRNS---------------V 554
+ E L+V D+ + VG KD + F +W+E+FQ R +RL +
Sbjct: 569 QWE-LSVRDVQATHVGFKDQRKGLFFVWQEVFQLPRAQRRLGGQDPNLLAHTLLPGNREM 627
Query: 555 SSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLM 614
S + S F + + ++ G+++ + G+ +N L+L+ D + LD L DL+
Sbjct: 628 GSLTLASQSFYHILRVTTSAGEHEKVVQGLFDNFLRLRLRDSSLGSVCMALDWLAFDDLL 687
Query: 615 HQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWHS 674
Q Q L Y L H L + P + +P + Q +N + ++ ++ S
Sbjct: 688 EQAAHHGQSFQLLHYLSFLPAAFHVLFASSHVPRIAFPSTQQEAQNRMSQIRNLIQTLVS 747
Query: 675 KIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSL 734
I P + ++L+ D++ +L IL+ P LRPV+ L S +EK L+ LV M++YSL
Sbjct: 748 GIAPATRSWATPQALILDTLCLVLDILT-PKLRPVSTQLYSTREKQQLSSLVGTMLAYSL 806
Query: 735 TYKNTKS 741
TY+ ++
Sbjct: 807 TYRQERT 813
>gi|410985397|ref|XP_003999009.1| PREDICTED: chromosome transmission fidelity protein 18 homolog
[Felis catus]
Length = 983
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 233/791 (29%), Positives = 359/791 (45%), Gaps = 131/791 (16%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LWVD++AP +TELLSD+ TNR +L WLK WD VFG E + L R
Sbjct: 282 LWVDEFAPRCYTELLSDDFTNRCLLKWLKLWDLVVFGRERPARRPRPGLELARG-----G 336
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
K+ SS +W S+ + ++D + P QKV LLC
Sbjct: 337 KEAATSS--------KW--------------KSHEQVLEDMLEADLDPSRRPRQKVALLC 374
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM-ADSRPKCLV 376
GPPGLGKTTLAHV A+ GY VVE+NASDDRS I QM SV+ A +P CLV
Sbjct: 375 GPPGLGKTTLAHVIARQAGYCVVELNASDDRSPEAFRTCIEAATQMESVLGAGGKPNCLV 434
Query: 377 IDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVI 436
IDEIDGA AV V+L ++ +RK E+ P +++ + L+RPVI
Sbjct: 435 IDEIDGA---PVAAVNVLLSIL--DRKGPQEAES-GGPAVPTSGGRRRRAEGGLLMRPVI 488
Query: 437 CICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTEC 496
CICND + P+LR LRQ A + F SR+V RL+ I M+ AL L E T+
Sbjct: 489 CICNDQFVPSLRQLRQQAFLLHFPPTLSSRLVQRLQEISLRRGMQADPGALAALCEKTDN 548
Query: 497 DIRSCLNTLQFL-DKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVS 555
DIR+C+NTLQFL + + L+V + + VG KD + F +W+E+FQ + +R R +
Sbjct: 549 DIRACINTLQFLHGRGRRQLSVQVVQTTRVGLKDQRKGLFSVWQEVFQLPRAQRQRWGQN 608
Query: 556 SS------------------------SNVSNEFDFLHSLISNRGDYDVIFDGIHENILQL 591
+ + S F + + ++ G+++ + G+ +N L+L
Sbjct: 609 LALIPHTLLLGDGPTGLGPRPAEVPLTMASQRFYHILHVAASAGEHEKVVQGLFDNFLRL 668
Query: 592 QYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEW 651
+ D + LD L DL+ + Q L Y P L H L + P + +
Sbjct: 669 RLRDSSLGAVCAALDWLAFDDLLSRAAHHGQSFRLLRYLPFLPAAFHLLFASSHVPRIAF 728
Query: 652 PKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVAL 711
P S Q +N + ++ ++ S + P +R + + + LL + P LRPV+
Sbjct: 729 PSSQQEAQNRTSKTQNLIQTLVSGLTP-ATRSRAAPQALVLDVLCLLLDILAPKLRPVST 787
Query: 712 HLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITF 771
L S +EK LA LV M++YSLTY+ + H V L +P + E F
Sbjct: 788 QLYSTREKQQLAGLVGTMLAYSLTYRQERMPD---------GHYVYRL--EPNVEEVCRF 836
Query: 772 KGYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLA----------DGYKENMDLAG 821
+ L KQ++ HE+E +++ ++E LA G + +AG
Sbjct: 837 PELPARK-PLTYQAKQLIAHEIEMEKMR-----RAEALARAGDNNQVSLPGLRGPQGVAG 890
Query: 822 EEDSKTESAKTNNAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSG 881
E+ ++ +++++ ++++K A+++ +
Sbjct: 891 EKATQPPASRSHEEQRLERILKK----------------------------AALEEQPER 922
Query: 882 DTKKSFRSSSSFFDR--FRKL----SGKVSQDNDNAVQKATVERDSLPLLFKFNEGFTNA 935
D FF R ++ +G V+ D D + + F+F EG +NA
Sbjct: 923 D----------FFGRVVIKRAPALNAGDVAPDTDATEWRIGTAVGRSDVWFRFKEGVSNA 972
Query: 936 VKRPVRMRDFL 946
V+R + +RD L
Sbjct: 973 VRRSLYIRDLL 983
>gi|358060672|dbj|GAA93611.1| hypothetical protein E5Q_00255 [Mixia osmundae IAM 14324]
Length = 838
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 220/814 (27%), Positives = 363/814 (44%), Gaps = 148/814 (18%)
Query: 152 SNSLTSEPIDVLLQKVEQEAFNKALNSSSEGQSDRSLPEKPVVHEQ-------LWVDKYA 204
++S PI L+ V + + + + Q + + P+ +Q LW D Y
Sbjct: 150 ASSFLEMPIHQLMADVRDQLKQERASKAQAAQDPQRIISGPLETDQDRIRNSRLWTDVYR 209
Query: 205 PNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSS 264
P FT+L+ DE+T+R + WLK+WD+CVF + NKK
Sbjct: 210 PKRFTDLMGDERTHRNAMTWLKEWDNCVFKT--------------------GNKK----- 244
Query: 265 FTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGK 324
RG+ S G + N + G P++K+LLL GPPGLGK
Sbjct: 245 ---PKRGDTASRGPGHDKENAPID----------------PYGRPQEKILLLSGPPGLGK 285
Query: 325 TTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV-----MADSRPKCLVIDE 379
TTLAHV A GY V E+NASDDR+ + ++I D ++ ++ ++ RP C++IDE
Sbjct: 286 TTLAHVLATQAGYRVHEINASDDRTGRIVTDRIRDAIECRAISVQGGLSSDRPTCVIIDE 345
Query: 380 IDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICIC 439
IDGA G G+ A + ++V + + K N K KK G LLRP+ICIC
Sbjct: 346 IDGAGGSGENAF--VKQLVKFVQDGSMVKHNKGK-------GKKTG---RPLLRPIICIC 393
Query: 440 NDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIR 499
NDLYA LR LR A++ F + ++ RL+ +C+ E + + LT L E D+R
Sbjct: 394 NDLYANVLRPLRPFARIIRFGVATAPTLLRRLRTVCDQEGLVADAKHLTKLVEVAGGDMR 453
Query: 500 SCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSN 559
+CLNTLQF+ K L+ I S +G KD S +W +F + R +
Sbjct: 454 NCLNTLQFIKSKGTRLDEQAIRSSSIGLKDTGTSPGAVWDHLF---RIPTDRKGAPRAGR 510
Query: 560 VSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIM 619
+ F++L +S G+YD I G E + + V L ++ LG DL+ I
Sbjct: 511 DGSIFEWLLRDVSTCGEYDKIAQGCFEWYPEAKLTTDVWLSILRAHQWLGLYDLLDTKIK 570
Query: 620 RTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKS-YQRY--RNAFMEKMDIFKSWHSKI 676
Q L Y P I + L + I +E K+ Y+ + ++A E +D S+ +
Sbjct: 571 THQDYELLAYVPYTLIAWNPLFASITNRPIERAKADYEAFVRQSAHREVLD---SFCKPL 627
Query: 677 PPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTY 736
P I S+V + + L I+S P L+P+ ++ A EK L +LV+ M+ L+Y
Sbjct: 628 KPTIKSTFLGNSVVVELAAYLTRIIS-PDLKPINSQIVKADEKQALKKLVAIMLDLGLSY 686
Query: 737 KNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLA-LAVKQVLVHEVEK 795
+++ ++S+ DP ++ ++ ++G R+ A + + + +++
Sbjct: 687 LPERTE------DGQLSY-----KLDPAVDVWVHWEGKRAPDIPAARYSTRHAIACQIDA 735
Query: 796 QRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTNNAAVSAKLIEKSKSLPYSRQCN 855
+RI +++ DG Q
Sbjct: 736 ERIT-----RAQGTGDG---------------------------------------SQAT 751
Query: 856 PSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDR---FRKLSGKVSQDNDNAV 912
+ ST+++ + +ST + KS S+ FF R L+ K S+ D++
Sbjct: 752 STASTLMSAYGAMSTSTTAGAIKSD--------STMDFFGRSLPSLALNHKQSEVEDDSS 803
Query: 913 QKATVERDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
+ A+ L +++KF+EGF+NAV+ P+ + +
Sbjct: 804 EPAS---KRLKVVYKFHEGFSNAVRVPITISNLF 834
>gi|71017291|ref|XP_758970.1| hypothetical protein UM02823.1 [Ustilago maydis 521]
gi|46098636|gb|EAK83869.1| hypothetical protein UM02823.1 [Ustilago maydis 521]
Length = 1104
Score = 272 bits (695), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 238/852 (27%), Positives = 374/852 (43%), Gaps = 106/852 (12%)
Query: 152 SNSLTSEPIDVLLQKVEQ-EAFNKALNSSSEGQSDRSLPEKPVVHE-----QLWVDKYAP 205
++ L PI LL VE +A + Q R +H Q+WVDK+ P
Sbjct: 302 ASQLLDRPIHQLLDAVEALKALEVVERDEAHAQQARESANHTAMHNSKAALQMWVDKHRP 361
Query: 206 NSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSF 265
FTELL DE+ +REVL WLK+WD CVF K++N
Sbjct: 362 AKFTELLGDERVHREVLGWLKEWDECVF------------------------KRKNH--- 394
Query: 266 TRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKT 325
RK R ++ + S+N KG + SW G P+++++++ GPPGLGKT
Sbjct: 395 -RKERHRQYIQSKYGFSDN----GFGDKGSEHSWKD---PYGRPKERIMMISGPPGLGKT 446
Query: 326 TLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVIDEID---- 381
TLAHV H GY+V E+NASD RS+ +E+ I ++ S + D RP +VIDEID
Sbjct: 447 TLAHVIGAHAGYNVYELNASDARSAGAVEDVIKMALESGS-LKDPRPTLVVIDEIDGATG 505
Query: 382 GALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICND 441
G G + I +V A VA K ++KG K LLRP+ICICND
Sbjct: 506 GGGGASGESHGFIRALVRLVEMGKGAGPKVAGLGARGKKQQRKGFK--PLLRPIICICND 563
Query: 442 LYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSC 501
LYAP+LR LR I+K+ F +P + VV RL+ +C E++ + L+ LAE T DIRSC
Sbjct: 564 LYAPSLRPLRPISKLIRFHKPPTNLVVKRLREVCEAEALSVEARGLSLLAELTNGDIRSC 623
Query: 502 LNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNS-------- 553
LN L+F K L + S VG KD W+ +F+++ K+ S
Sbjct: 624 LNALEFAKTKNIALTEAAVKSASVGIKDTGGHVHKAWEVLFRRQNRKQAAASSMKRANAK 683
Query: 554 -------------------VSSSSNVSNEFDFLHS----------LISNRGDYDVIFDGI 584
++ +F+ + + +++ +Y+ + G
Sbjct: 684 AADADASPWNSSRKASASELTGDGKAPKDFNLIDTPQENVKRIVHEVTSCNEYEKLAQGC 743
Query: 585 HENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQI 644
E+ L+ D + + D L + L + P + H L + +
Sbjct: 744 FEHYPTLRAADGGWKRYRQVHDWLHFGQSITSRAWSQGNFELLGFMPWSFVCWHLLFAHV 803
Query: 645 QKPNLEWPKS-YQRY--RNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHIL 701
E+PK+ Y+ + +AF E I S +P + + +S+V + L+ IL
Sbjct: 804 GNALPEYPKADYENHLKTSAFNE---IASQIVSVLPANVRSQFNRQSVVTELGPSLMRIL 860
Query: 702 SPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTK-SDPLLNNLGNEVSHDVSTLS 760
+ P LRP+ L ++K A LVS M ++ + K S+ + G V L
Sbjct: 861 T-PDLRPINNQLSRTEDKQSFASLVSIMTWLNVRFVQDKISEDEASVTGQTAGQLVYKL- 918
Query: 761 FDPPINEFITFKGYRSNHYVLA-LAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKENMDL 819
DPP++ F F+G RS + AV+Q++ E+E+Q +++ G D +
Sbjct: 919 -DPPLDVFTQFEGKRSKEIGPSRFAVRQLVAREMERQ-MLRRNAGVEARNDDAGSTSKSA 976
Query: 820 AGEEDSKTESAKTNNAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSS--RSSTASVKP 877
K + A+ K EKS + R P ++++ + + K
Sbjct: 977 TAIYRCKGDKVDAARDALETK-KEKSAVDFFGRPIVPKSASLRVGMSTEPIVQCMGGQKR 1035
Query: 878 KSSGDTKKSFRSSSSFFDRFRKLSGKVSQDNDNAVQKATVE---RDSLPLLFKFNEGFTN 934
K S D +S +G V+ N +A A V+ D + + ++++EGF+N
Sbjct: 1036 KVSDDISC---GASELTPTTTLAAGDVNAANHDATAPAAVDLVRDDKIKVFYRYHEGFSN 1092
Query: 935 AVKRPVRMRDFL 946
AV+RPV++ L
Sbjct: 1093 AVRRPVKISSLL 1104
>gi|383866003|ref|XP_003708461.1| PREDICTED: chromosome transmission fidelity protein 18 homolog
[Megachile rotundata]
Length = 885
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 227/838 (27%), Positives = 367/838 (43%), Gaps = 140/838 (16%)
Query: 119 LPVTAPSGGDRVYVKISSSGVEERVKKLDVRAHSN-------SLTSEPIDVLLQKVEQEA 171
+ VT P R+YV+I E+ + K + SN L +E +++ + V+ +
Sbjct: 178 VAVTRPHDAQRIYVRIKDD--EKYMFKTNTNLISNLLSVPYSQLKAEAEEIIAENVKHAS 235
Query: 172 FNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSC 231
F N + K + +++LWVDKY P ++ ELLSDE NR +L W+K WD
Sbjct: 236 FETFENPVA----------KAIENDELWVDKYKPRTYIELLSDESVNRNLLHWIKLWDKV 285
Query: 232 VFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSN 291
VF + + L ++ R N F+N N+ E +N
Sbjct: 286 VFNRNYVQSRKGKLQSIFR-------------------------NKKFKNENSEEVDNK- 319
Query: 292 SKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSS 351
G P Q+V+LL GPPGLGKTTLAH+AAKH GY+VVE+NASD+RS
Sbjct: 320 ---------------GFPTQRVVLLSGPPGLGKTTLAHLAAKHAGYNVVEINASDERSPD 364
Query: 352 TIENKILDVVQMNSVMA-DSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKEN 410
+L QM +VM D RP CL++DEIDGA +++++LK V + + K++
Sbjct: 365 AFRQVLLASTQMKAVMGSDPRPNCLILDEIDGAPA---ASIDLLLKFVQG-KLTVKGKKD 420
Query: 411 VAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSR 470
K D+ + RPVICICN+ Y P+LR+LR IA + + S +R+ R
Sbjct: 421 KMKTDKQSNVCH----------RPVICICNEPYTPSLRALRAIALIIPVPEVSPARLAER 470
Query: 471 LKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV-VGRKD 529
L I + E +K + AL L E + CDIRSCL LQ++ + G + KD
Sbjct: 471 LMEISHKEHLKVNPDALLKLVEISGCDIRSCLGALQYMGG-------IRFGDNLSFALKD 523
Query: 530 MSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENIL 589
+ FD WK+I + +S + L ++ RG+ D + GI N
Sbjct: 524 SRKGLFDSWKQILTIPVNRGGILPISERVRI-----VLKTV--QRGETDKLAQGIFHNYP 576
Query: 590 QLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNL 649
++ + CL D + + Q + Y +T H ++ + L
Sbjct: 577 EICSEKLGYIAI--CLQWFQFFDEICSLVTHFQTWSVMPYTNYAFVTWHLYFAKARNARL 634
Query: 650 EWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVED-SISPLLHILSPPTLRP 708
+P + + + + I S + R +++V I P L L P LR
Sbjct: 635 SYPSIFYEVKQKEAKNIGILTS--------VQRSSGRDNIVLSVDIIPFLPELLSPRLRT 686
Query: 709 VALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEF 768
++ HL S+KE++D+ ++V+ ++ + LTY + NL + DP I E
Sbjct: 687 ISGHLHSSKERDDIVRIVNILIEFGLTYAQER------NLDGTYDY-----KLDPDIFEI 735
Query: 769 ITFKGYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTE 828
F + + LA VKQ++V E+E +R+ + A+ K +L +D
Sbjct: 736 GIFPECK-HRRTLAYGVKQIIVQELEAERLRRA--------ANVIKNVTNLTQYQDKNGS 786
Query: 829 SAKTNNAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFR 888
+V +K+ K + + +PS T ++PK+ K
Sbjct: 787 KQNITEKSVESKVAIKEQ----NNASSPSNCT---------EHVNKIEPKTKEIKYK--- 830
Query: 889 SSSSFFDRFRKLSGKVSQDNDNAVQKATVERDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
FF R + + +DN + + +K+ EGF+NAV+R ++M++
Sbjct: 831 ---DFFGRIITVDQNKQKKSDNESINSHSFLTKHGVWYKYKEGFSNAVRRTIKMKELF 885
>gi|409044765|gb|EKM54246.1| hypothetical protein PHACADRAFT_210061 [Phanerochaete carnosa
HHB-10118-sp]
Length = 674
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 181/612 (29%), Positives = 298/612 (48%), Gaps = 92/612 (15%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LWVD+Y P + +LL D++ +REV+ W+K+WD CVFG
Sbjct: 31 LWVDRYRPQRYIDLLGDDRLHREVMAWVKEWDYCVFG----------------------- 67
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
K +G++ + R+ NL+ H++ P++K+LL+
Sbjct: 68 ----------KRKGSKRA----RDEENLDE------------HRR------PKEKILLIS 95
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVI 377
GPPGLGKTTLAH+ AK GY V EVNASD RS+ ++ +I ++ + + SRP LV+
Sbjct: 96 GPPGLGKTTLAHIVAKQAGYSVFEVNASDARSAQIVDERIRPALESGATIGSSRPTLLVV 155
Query: 378 DEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKAS-LLRPVI 436
DEIDGA G + I ++V D+P++ +K+ + LLRP+I
Sbjct: 156 DEIDGATGGTDSSAGFIHRLVHL------------IHDKPKRRAKRGEPQTHRPLLRPII 203
Query: 437 CICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTEC 496
CICNDLYA +L LR A++ F +P+ R+V+RL+ IC E +K S ALTTL +
Sbjct: 204 CICNDLYASSLVKLRPNARIVRFNRPNDYRLVNRLREICELEGLKAQSCALTTLVGLAQG 263
Query: 497 DIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSS 556
D+R CLNTLQ + + E + I S G K+ S + ++F +R + +
Sbjct: 264 DLRGCLNTLQLIRARNEEVTENVIRSATTGMKEAEVSQTAVLNDLFTPLPHRRAKELGLT 323
Query: 557 SSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQ 616
+++ L + G D I G E+ L+ HD + + + L D
Sbjct: 324 EDDLARYVGRLSRTVEASGAPDRIAIGCFEHYATLKRHDASFARYLSADEWLTTYDAFAG 383
Query: 617 YIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKI 676
+ ++ L Y P L + + L + P +E PK YR +++KS +
Sbjct: 384 EMRAEREYALAQYLPYLLVPFYPLFHERGTPKVERPKVDWEYRTHTQVNEEVYKSLAKCL 443
Query: 677 PPYIS------RHLSTESLVEDSISPLLH-ILSPPTLRPVALHLLSAKEKNDLAQLVSAM 729
+ RHL+++ +++ ++P+++ I+SPP LRPV ++ +E+ +++LV M
Sbjct: 444 ITAGTRHGGAYRHLASDGVLQLELAPMINRIISPP-LRPVNKQIVKPEERAIMSRLVDIM 502
Query: 730 VSYSLTYKNTKSD--PLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLA-LAVK 786
V+ L + KS+ L+ L DPPI+ F+T+ G R+ ++ AV+
Sbjct: 503 VALELRFIQEKSEDGQLMYRL-------------DPPIDTFVTYDGKRAADIAVSRYAVR 549
Query: 787 QVLVHEVEKQRI 798
++ E++ Q I
Sbjct: 550 HLVAAEIDAQLI 561
>gi|358346966|ref|XP_003637534.1| Chromosome transmission fidelity protein-like protein [Medicago
truncatula]
gi|355503469|gb|AES84672.1| Chromosome transmission fidelity protein-like protein [Medicago
truncatula]
Length = 319
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 127/192 (66%), Positives = 153/192 (79%), Gaps = 4/192 (2%)
Query: 518 MDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRL-RNSVSSSSNVSNEFDFLHSLISNRGD 576
DIGSQVVG+KDMS++ DIWKE+FQ+++TK++ R S++S + EFD L+SLIS RGD
Sbjct: 116 FDIGSQVVGQKDMSKNVLDIWKELFQRKRTKKMERKSLNSKFS---EFDTLYSLISYRGD 172
Query: 577 YDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAIT 636
D+I DGIHENILQL YHDPVM KTVKCL+ L DL+HQYIMRTQQM L V+ PP+AI
Sbjct: 173 SDLILDGIHENILQLNYHDPVMQKTVKCLNSLEVYDLLHQYIMRTQQMALLVHLPPIAII 232
Query: 637 VHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISP 696
VH V+Q+QKPN+EWPKSY RYR MEKMDI +WH KI P+I+RHLS S VED ISP
Sbjct: 233 VHHTVAQVQKPNIEWPKSYHRYRTTMMEKMDILNTWHHKISPHIARHLSPTSFVEDLISP 292
Query: 697 LLHILSPPTLRP 708
LL ILSPP++RP
Sbjct: 293 LLDILSPPSIRP 304
>gi|14336725|gb|AAK61256.1|AE006465_2 some homology with holliday junction DNA helicase RUVB like [Homo
sapiens]
Length = 1184
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 194/582 (33%), Positives = 281/582 (48%), Gaps = 78/582 (13%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LWVD++AP +TELLSD+ TNR +L WLK WD VFG E S ++
Sbjct: 476 LWVDEFAPRHYTELLSDDFTNRCLLKWLKLWDLVVFGHERPSRKP--------RPSVEPA 527
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
+ +++ K W S+ E G+ S P+QKV LLC
Sbjct: 528 RVSKEATAPGK-----W------KSHEQVLEEMLEAGLDPSQR--------PKQKVALLC 568
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM-ADSRPKCLV 376
GPPGLGKTTLAHV A+H GY VVE+NASDDRS +I QM SV+ A +P CLV
Sbjct: 569 GPPGLGKTTLAHVIARHAGYSVVEMNASDDRSPEVFRTRIEAATQMESVLGAGGKPNCLV 628
Query: 377 IDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVI 436
IDEIDGA A+ V+L +++ + + A P +++ + L+RP+I
Sbjct: 629 IDEIDGA---PVAAINVLLSILNRKGPQEVGPQGPAV---PSGGGRRRRAEGGLLMRPII 682
Query: 437 CICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTEC 496
CICND +AP+LR L+Q A + F SR+V RL+ E M+ L L E T+
Sbjct: 683 CICNDQFAPSLRQLKQQAFLLHFPPTLPSRLVQRLQ-----EGMRADPGVLAALCEKTDN 737
Query: 497 DIRSCLNTLQFL-DKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVS 555
DIR+C+NTLQFL + + L+V D+ + VG KD R F +W+E+FQ + +R VS
Sbjct: 738 DIRACINTLQFLYSRGQRELSVRDVQATRVGLKDQRRGLFSVWQEVFQLPRAQRSSQHVS 797
Query: 556 ------------------------------------SSSNVSNEFDFLHSLISNRGDYDV 579
+ + LH+ S G+++
Sbjct: 798 VLTCHGTPGDAGLVVLQDMGDAGLGLWDVLLLAWTRRGTFPGRFYRVLHAAASA-GEHEK 856
Query: 580 IFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHR 639
+ G+ +N L+L+ D + LD L DL+ +Q L Y P L + H
Sbjct: 857 VVQGLFDNFLRLRLRDSSLGAVCVALDWLAFDDLLAGAAHHSQSFQLLRYPPFLPVAFHV 916
Query: 640 LVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLH 699
L + P + +P S Q +N + ++ ++ S I P +R +T + LL
Sbjct: 917 LFASSHTPRITFPSSQQEAQNRMSQMRNLIQTLVSGIAP-ATRSRATPQALLLDALCLLL 975
Query: 700 ILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKS 741
+ P LRPV+ L S +EK LA LV M++YSLTY+ ++
Sbjct: 976 DILAPKLRPVSTQLYSTREKQQLASLVGTMLAYSLTYRQERT 1017
>gi|340715955|ref|XP_003396471.1| PREDICTED: chromosome transmission fidelity protein 18 homolog
[Bombus terrestris]
Length = 882
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 243/842 (28%), Positives = 374/842 (44%), Gaps = 149/842 (17%)
Query: 119 LPVTAPSGGDRVYVKISSSGVEERVKKLDVRAHSNSLTSEPIDVLLQKVEQEAFNKALNS 178
+ +T P R+Y+++ + + ++KK + + SN L S P L E+ +
Sbjct: 176 IALTRPHDAQRIYIRVKNDE-QNKIKK-NTDSISN-LLSVPYSQLKTAAEEIILQNIKRA 232
Query: 179 SSEGQSDRSLP----EKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFG 234
SSE +P K ++LWVDKY P S+ ELLSDE NR +L W+K WD VF
Sbjct: 233 SSE------IPYLAATKSAKDDELWVDKYRPRSYMELLSDESVNRHLLHWIKLWDKIVFN 286
Query: 235 SEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKG 294
R+ ++ KK N FT KN+ K
Sbjct: 287 ---------------RNYVNNKRKKVN---FTFKNK----------------------KF 306
Query: 295 IQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIE 354
+ + ++ S G P Q+++LL GPPGLGKTTLAH+AAKH GY+VVE+NASD+RS
Sbjct: 307 MDEKAFQEVDSKGFPIQRIVLLSGPPGLGKTTLAHLAAKHAGYNVVEINASDERSPDAFR 366
Query: 355 NKILDVVQMNSVMA-DSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAK 413
+L QM +VM D +P CLV+DEIDGA +++++LK V + S K
Sbjct: 367 QVLLASTQMKAVMGNDPKPNCLVLDEIDGAPA---ASIDLLLKFVQGKLVSK------GK 417
Query: 414 EDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKH 473
+D+ + + C RPVICICN+ Y P+LR+LR +A + + S ++V RL
Sbjct: 418 KDKTKTAKQSNSCH-----RPVICICNEPYTPSLRALRAVALIIPVPEVSATKVADRLME 472
Query: 474 ICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV-VGRKDMSR 532
I E++K + AL L + + CDIRSCL LQ++ + +G + KD +
Sbjct: 473 ISKKENLKVNPDALLGLVKVSGCDIRSCLGALQYMGG-------ISLGDNLSFALKDSRK 525
Query: 533 SAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQ 592
FD WK+I ++ + S +S + + N G+ + + GI N +
Sbjct: 526 GLFDSWKQIL------KIPMNRSGILPLSERVQLVLKTVQN-GETEKLAQGIFHNYPETC 578
Query: 593 YHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWP 652
+ + CL D + I Q + Y + + H + L +P
Sbjct: 579 NDNFSYIAL--CLQWFQLFDEILSLIASLQTWSIMPYINYMFVAWHLYFATTGNIKLSYP 636
Query: 653 KSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLV-EDSISPLLHILSPPTLRPVAL 711
+ I + + R S++ I+P L L P LR V+
Sbjct: 637 SIAYEMSQKHARNVGILTA--------VQRSSGRNSVILTIDIAPFLPDLLSPQLRTVSG 688
Query: 712 HLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITF 771
HL S KEK+DL +LV+ ++ LT+ K NL + S+D DP I E F
Sbjct: 689 HLHSDKEKDDLNRLVNILIDIGLTFIQEK------NL--DESYD---YKLDPNIFEIGIF 737
Query: 772 KGYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESAK 831
+ H L VKQ++V E+E +R+ + A T S +
Sbjct: 738 PDCKY-HRTLTYTVKQIIVQELEAERLRR-------------------AENAIKNTRSIQ 777
Query: 832 TNNAAVS-AKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSS 890
+ N ++ +I S S P ++ CN + S ++ S++ A D
Sbjct: 778 SKNEKITNHNVITNSTSDPVTKICNNAASKT-NVIEQSKNLQAKTTETKYKD-------- 828
Query: 891 SSFFDRFRKLSGKVSQDNDNAVQKATVERDSLPLL------FKFNEGFTNAVKRPVRMRD 944
FF R V QD N + K ++ +SL L +K+ EGF+NAV+R V+MR+
Sbjct: 829 --FFGRII----TVDQDKHNKLDKESI--NSLNRLTKNGVWYKYKEGFSNAVRRKVKMRN 880
Query: 945 FL 946
L
Sbjct: 881 LL 882
>gi|441659698|ref|XP_004091361.1| PREDICTED: LOW QUALITY PROTEIN: chromosome transmission fidelity
protein 18 homolog [Nomascus leucogenys]
Length = 949
Score = 268 bits (684), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 160/451 (35%), Positives = 237/451 (52%), Gaps = 25/451 (5%)
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM- 367
P QKV LLCGPPGLGKTTLAHV A+H GY VVE+NASDDRS +I QM +V+
Sbjct: 329 PRQKVALLCGPPGLGKTTLAHVIARHAGYSVVEMNASDDRSPEVFRTRIEAATQMQAVLG 388
Query: 368 ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCK 427
A +P CLVIDEIDGA A+ V+L +++ + + A P +++
Sbjct: 389 AGGKPNCLVIDEIDGA---PVAAINVLLSILNRKGPQEVEPQGPAV---PSGGGRRRRAD 442
Query: 428 KASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIAL 487
L+RP+ICICND +AP+LR L+Q A + F SR+V RL+ + + M+ L
Sbjct: 443 GGLLMRPIICICNDQFAPSLRQLKQQAFLLHFPPTLPSRLVQRLQEVSLRQGMRADPGVL 502
Query: 488 TTLAEYTECDIRSCLNTLQFL-DKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRK 546
L E T+ DIR+C+NTLQFL + + L+V D+ + VG KD R F +W+E+FQ +
Sbjct: 503 AALCEKTDNDIRACINTLQFLYSRGQRELSVGDVQATRVGLKDQRRGLFSVWQEVFQLPR 562
Query: 547 TKRLR----------------NSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQ 590
+R R V S ++ S F + ++ G+++ + G+ +N L+
Sbjct: 563 AQRRRVGQDPAPPADILLLGDGDVGSLTSASQRFYRVLHATASAGEHEKVVQGLFDNFLR 622
Query: 591 LQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLE 650
L+ D + LD L DL+ +Q L Y P L + H L + P +
Sbjct: 623 LRLRDSSLGAVCAALDWLAFDDLLAGAAHHSQSFQLLRYPPFLPVAFHVLFASSHTPRIT 682
Query: 651 WPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVA 710
+P S Q +N + ++ ++ S I P +R +T + LL + P LRPV+
Sbjct: 683 FPSSQQEAQNRMSQMRNLIQTLVSGITP-ATRSRATPQALLLDALCLLLDILAPKLRPVS 741
Query: 711 LHLLSAKEKNDLAQLVSAMVSYSLTYKNTKS 741
L S +EK LA LV M++YSLTY+ ++
Sbjct: 742 TQLYSTREKQQLASLVGTMLAYSLTYRQERT 772
>gi|389749180|gb|EIM90357.1| P-loop containing nucleoside triphosphate hydrolase protein
[Stereum hirsutum FP-91666 SS1]
Length = 766
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 217/781 (27%), Positives = 337/781 (43%), Gaps = 132/781 (16%)
Query: 196 EQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTIS 255
+ LWVDKY P +T+L+ DE+ +REVL W+K+WD CV
Sbjct: 88 DTLWVDKYRPQKYTDLIGDERLHREVLGWVKEWDYCV----------------------- 124
Query: 256 QNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLL 315
F +K R EN + K D +H+ P +K+LL
Sbjct: 125 ---------FGKKKGKKRARE-----------ENVDGKP-PDQYHR-------PYEKILL 156
Query: 316 LCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCL 375
L GPPGLGKTTLAHV A+ GY+V E+NASD RS+S +E +I ++ + + SRP +
Sbjct: 157 LSGPPGLGKTTLAHVVARQAGYNVFEINASDARSASVVEERIRPAIESGAAVGSSRPNLV 216
Query: 376 VIDEIDGALGDGKGAVEVILKM--VSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLR 433
VIDEIDGA G G I K+ ++ E+ SN ++ KK+ + LLR
Sbjct: 217 VIDEIDGATGGGDNGAGFIYKLTQMALEKPSN------------QRRKKKEANGQRPLLR 264
Query: 434 PVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEY 493
P+ICICNDLYA +L LR +A++ F +P+ +V RL+ IC ES+K S ALTTL
Sbjct: 265 PIICICNDLYASSLAKLRPLARIVRFSRPADLHMVKRLREICEEESLKAESRALTTLVGV 324
Query: 494 TECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNS 553
D R CLNTLQ L + + + + G K+ S + +F +R++
Sbjct: 325 CMGDFRGCLNTLQLLKARNQTVTEPIVRKATSGMKEADSSFNVVLNSLFAPMNKQRVKEL 384
Query: 554 VSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDL 613
S S D + + G D + G E+ L HD + +K + L + D+
Sbjct: 385 GMSEEQDSKYVDRISRDVEASGALDRVALGCFEHYANLHQHDGTFTRYMKGNEWLVSYDM 444
Query: 614 MHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWH 673
+ + ++ L Y + + L P +E PK+ +IFKS
Sbjct: 445 LSGTMYSEREYALMPYLAYNLVAFYPLFHVRGGPKVERPKADWENFTRTRANEEIFKSLA 504
Query: 674 SKIPPYIS------RHLSTESLVEDSISPLLH-ILSPPTLRPVALHLLSAKEKNDLAQLV 726
+ R L ++ ++ +P ++ I+SPP LRPV ++ +EK LA+LV
Sbjct: 505 HSVRVGNGHNTGHHRDLISDDILHLEFAPYINRIISPP-LRPVNSQVIRPEEKALLARLV 563
Query: 727 SAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLA-LAV 785
S MVS L + K++ G V DPP++ F+T+ G R++ ++ AV
Sbjct: 564 SIMVSLELRFVQEKAED-----GQLV------YRLDPPVDVFVTYDGKRASDIAVSRYAV 612
Query: 786 KQVLVHEVEKQRIMQ-------VTIGKSEHLADGYKENMDLAGEEDSKTESAKTNNAAVS 838
+ ++ E++ Q I + GKS G + D A D
Sbjct: 613 RHLVAAEIDAQLIARQAEAVERTKAGKSSSFF-GARNTAD-ADHADEPQPGEGEGGTGEG 670
Query: 839 AKLIEKSKSLPYSRQCNPSTSTVLTT-------------LDSSRSSTASVKPKSSGDTKK 885
+ + P R P+ + + S + KP SS
Sbjct: 671 TLSRARPEDRPRKRAKGPAEKEIDIADKPAVDFFGRPIKVTPSTNKAGGRKPSSSAANGP 730
Query: 886 SFRSSSSFFDRFRKLSGKVSQDNDNAVQKATVERDSLPLLFKFNEGFTNAVKRPVRMRDF 945
+SS++ + +R + +KF EG + AV++PV++ F
Sbjct: 731 GAKSSNAAVEAYR-------------------------VAYKFKEGNSAAVRKPVKVSSF 765
Query: 946 L 946
L
Sbjct: 766 L 766
>gi|406695748|gb|EKC99049.1| hypothetical protein A1Q2_06650 [Trichosporon asahii var. asahii
CBS 8904]
Length = 796
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 168/506 (33%), Positives = 260/506 (51%), Gaps = 54/506 (10%)
Query: 307 GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV 366
G P +++LLL GPPG GKTTLAHV AKH GY +E+NASDDRS++T+ +I + + S
Sbjct: 212 GRPRERILLLSGPPGYGKTTLAHVVAKHAGYRTLEINASDDRSAATVSVRIQNAIDAGSG 271
Query: 367 MA-DSRPKCLVIDEIDGALGDGKGA-VEVILKMVSAERKSNTAKENVAKEDQPEKISKKK 424
+ + RP +VIDEIDGA G G + V ++K++ +D P +KKK
Sbjct: 272 LGSEGRPTAVVIDEIDGASGGGDTSFVRSLIKLI---------------QDVP---AKKK 313
Query: 425 GCKKAS-LLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTS 483
G + A L RP+ICICNDLYAPALR LRQ A++ F +P +V+RL+ IC+ E +
Sbjct: 314 GNQPAKPLRRPIICICNDLYAPALRPLRQFARIVRFRKPPTQFIVARLREICDREKLSAD 373
Query: 484 SIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQ 543
+ LTTL E T D+RSCLNTLQF+ K +++ I S VG KD + W +F
Sbjct: 374 TRVLTTLVELTGGDVRSCLNTLQFIKSKSDVVTNDAIKSTSVGAKDSGTTLQATWNTLFV 433
Query: 544 KRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVK 603
K+ R + D + S++ G+YD + G E+ L+ D +
Sbjct: 434 PMAAKQRRKVIGIDDG--RYVDRITSIVQTCGEYDRLVQGCFEHYPNLKPLDASFANVCR 491
Query: 604 CLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPN-----LEWPKS-YQR 657
LD + D ++ I +T + LY Y P V S P EWPK+ Y+
Sbjct: 492 QLDWVAYFDRLNGKISQTMEFELYPYLP---YAVTAWYSHFAAPGNATRPAEWPKADYEL 548
Query: 658 YRNAFMEKM---DIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLL 714
A+ ++ +I +++ + P + S + + + + L+ I+SPP L+PV +++
Sbjct: 549 TLQAYQTRIANEEIARNFMASEQPILRSLFSASATMTELLPLLMRIISPP-LKPVNANIV 607
Query: 715 SAKEKNDLAQLVSAMVSYSLTY---KNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITF 771
+ EK LA+LV M+ L + KN P++ +P I+ FI +
Sbjct: 608 KSSEKAVLARLVELMIPLGLRFWQEKNEDGQPMMR--------------LEPAIDVFIHY 653
Query: 772 KGYRSNHYVLA-LAVKQVLVHEVEKQ 796
+G R+ + AV+Q++ +E +
Sbjct: 654 EGKRAGDIAASRFAVRQLVAQAIEAE 679
>gi|119606111|gb|EAW85705.1| CTF18, chromosome transmission fidelity factor 18 homolog (S.
cerevisiae), isoform CRA_b [Homo sapiens]
Length = 987
Score = 267 bits (682), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 193/582 (33%), Positives = 281/582 (48%), Gaps = 78/582 (13%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LWVD++AP +TELLSD+ TNR +L WLK WD VFG E +
Sbjct: 279 LWVDEFAPRHYTELLSDDFTNRCLLKWLKLWDLVVFGHE------------------RPS 320
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
+K S + + G +++ + E G+ S P+QKV LLC
Sbjct: 321 RKPRPSVEPARVSKEATAPGKWKSHEQV-LEEMLEAGLDPSQR--------PKQKVALLC 371
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM-ADSRPKCLV 376
GPPGLGKTTLAHV A+H GY VVE+NASDDRS +I QM SV+ A +P CLV
Sbjct: 372 GPPGLGKTTLAHVIARHAGYSVVEMNASDDRSPEVFRTRIEAATQMESVLGAGGKPNCLV 431
Query: 377 IDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVI 436
IDEIDGA A+ V+L +++ + + A P +++ + L+RP+I
Sbjct: 432 IDEIDGA---PVAAINVLLSILNRKGPQEVGPQGPAV---PSGGGRRRRAEGGLLMRPII 485
Query: 437 CICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTEC 496
CICND +AP+LR L+Q A + F SR+V RL+ E M+ L L E T+
Sbjct: 486 CICNDQFAPSLRQLKQQAFLLHFPPTLPSRLVQRLQ-----EGMRADPGVLAALCEKTDN 540
Query: 497 DIRSCLNTLQFL-DKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVS 555
DIR+C+NTLQFL + + L+V D+ + VG KD R F +W+E+FQ + +R VS
Sbjct: 541 DIRACINTLQFLYSRGQRELSVRDVQATRVGLKDQRRGLFSVWQEVFQLPRAQRSSQHVS 600
Query: 556 ------------------------------------SSSNVSNEFDFLHSLISNRGDYDV 579
+ + LH+ S G+++
Sbjct: 601 VLTCHGTPGDAGLVVLQDMGDAGLGLWDVLLLAWTRRGTFPGRFYRVLHAAASA-GEHEK 659
Query: 580 IFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHR 639
+ G+ +N L+L+ D + LD L DL+ +Q L Y P L + H
Sbjct: 660 VVQGLFDNFLRLRLRDSSLGAVCVALDWLAFDDLLAGAAHHSQSFQLLRYPPFLPVAFHV 719
Query: 640 LVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLH 699
L + P + +P S Q +N + ++ ++ S I P +R +T + LL
Sbjct: 720 LFASSHTPRITFPSSQQEAQNRMSQMRNLIQTLVSGIAP-ATRSRATPQALLLDALCLLL 778
Query: 700 ILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKS 741
+ P LRPV+ L S +EK LA LV M++YSLTY+ ++
Sbjct: 779 DILAPKLRPVSTQLYSTREKQQLASLVGTMLAYSLTYRQERT 820
>gi|119606114|gb|EAW85708.1| CTF18, chromosome transmission fidelity factor 18 homolog (S.
cerevisiae), isoform CRA_e [Homo sapiens]
Length = 622
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 160/451 (35%), Positives = 238/451 (52%), Gaps = 25/451 (5%)
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM- 367
P+QKV LLCGPPGLGKTTLAHV A+H GY VVE+NASDDRS +I QM SV+
Sbjct: 12 PKQKVALLCGPPGLGKTTLAHVIARHAGYSVVEMNASDDRSPEVFRTRIEAATQMESVLG 71
Query: 368 ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCK 427
A +P CLVIDEIDGA A+ V+L +++ + + A P +++ +
Sbjct: 72 AGGKPNCLVIDEIDGA---PVAAINVLLSILNRKGPQEVGPQGPAV---PSGGGRRRRAE 125
Query: 428 KASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIAL 487
L+RP+ICICND +AP+LR L+Q A + F SR+V RL+ + + M+ L
Sbjct: 126 GGLLMRPIICICNDQFAPSLRQLKQQAFLLHFPPTLPSRLVQRLQEVSLRQGMRADPGVL 185
Query: 488 TTLAEYTECDIRSCLNTLQFL-DKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRK 546
L E T+ DIR+C+NTLQFL + + L+V D+ + VG KD R F +W+E+FQ +
Sbjct: 186 AALCEKTDNDIRACINTLQFLYSRGQRELSVRDVQATRVGLKDQRRGLFSVWQEVFQLPR 245
Query: 547 TKRLR----------------NSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQ 590
+R R S ++ S F + ++ G+++ + G+ +N L+
Sbjct: 246 AQRRRVGQDPALPADTLLLGDGDAGSLTSASQRFYRVLHAAASAGEHEKVVQGLFDNFLR 305
Query: 591 LQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLE 650
L+ D + LD L DL+ +Q L Y P L + H L + P +
Sbjct: 306 LRLRDSSLGAVCVALDWLAFDDLLAGAAHHSQSFQLLRYPPFLPVAFHVLFASSHTPRIT 365
Query: 651 WPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVA 710
+P S Q +N + ++ ++ S I P +R +T + LL + P LRPV+
Sbjct: 366 FPSSQQEAQNRMSQMRNLIQTLVSGIAP-ATRSRATPQALLLDALCLLLDILAPKLRPVS 424
Query: 711 LHLLSAKEKNDLAQLVSAMVSYSLTYKNTKS 741
L S +EK LA LV M++YSLTY+ ++
Sbjct: 425 TQLYSTREKQQLASLVGTMLAYSLTYRQERT 455
>gi|358345619|ref|XP_003636873.1| Chromosome transmission fidelity protein-like protein [Medicago
truncatula]
gi|355502808|gb|AES84011.1| Chromosome transmission fidelity protein-like protein [Medicago
truncatula]
Length = 265
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 127/192 (66%), Positives = 153/192 (79%), Gaps = 4/192 (2%)
Query: 518 MDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRL-RNSVSSSSNVSNEFDFLHSLISNRGD 576
DIGSQVVG+KDMS++ DIWKE+FQ+++TK++ R S++S + EFD L+SLIS RGD
Sbjct: 36 FDIGSQVVGQKDMSKNVLDIWKELFQRKRTKKMERKSLNSKFS---EFDTLYSLISYRGD 92
Query: 577 YDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAIT 636
D+I DGIHENILQL YHDPVM KTVKCL+ L DL+HQYIMRTQQM L V+ PP+AI
Sbjct: 93 SDLILDGIHENILQLNYHDPVMQKTVKCLNSLEVYDLLHQYIMRTQQMALLVHLPPIAII 152
Query: 637 VHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISP 696
VH V+Q+QKPN+EWPKSY RYR MEKMDI +WH KI P+I+RHLS S VED ISP
Sbjct: 153 VHHTVAQVQKPNIEWPKSYHRYRTTMMEKMDILNTWHHKISPHIARHLSPTSFVEDLISP 212
Query: 697 LLHILSPPTLRP 708
LL ILSPP++RP
Sbjct: 213 LLDILSPPSIRP 224
>gi|350425741|ref|XP_003494217.1| PREDICTED: chromosome transmission fidelity protein 18 homolog
[Bombus impatiens]
Length = 882
Score = 265 bits (678), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 233/843 (27%), Positives = 374/843 (44%), Gaps = 151/843 (17%)
Query: 119 LPVTAPSGGDRVYVKISSSGVEERVKKLD-----VRAHSNSLTSEPIDVLLQKVEQEAFN 173
+ +T P R+Y+++ ++ + K D + + L + +++LQ V++ +
Sbjct: 176 IALTRPHDAQRIYIRVKNNEQNKIKKNADSISNLLSVPYSQLKTAAEEIILQNVKRASCE 235
Query: 174 KALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVF 233
++++ D ++LWVDKY P S+ ELLSDE NR +L W+K WD VF
Sbjct: 236 IPYLAATKSAKD----------DELWVDKYRPRSYMELLSDESVNRHLLHWIKLWDKIVF 285
Query: 234 GSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSK 293
+ ++ KK+ +S+F KNR K
Sbjct: 286 N----------------RNYVNNKKKKVNSTF--KNR----------------------K 305
Query: 294 GIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTI 353
+ + ++ S G P Q+++LL GPPGLGKTTLAH+AAKH GY+VVE+NASD+RS
Sbjct: 306 FMDEKAFQEVDSKGFPIQRIVLLSGPPGLGKTTLAHLAAKHAGYNVVEINASDERSPDAF 365
Query: 354 ENKILDVVQMNSVMA-DSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVA 412
+L QM +VM D +P CLV+DEIDGA +++++LK V + S
Sbjct: 366 RQVLLASTQMKAVMGNDPKPNCLVLDEIDGAPA---ASIDLLLKFVQGKLVSK------G 416
Query: 413 KEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLK 472
K+D+ + + C RPVICICN+ Y P+LR+LR +A + + S ++V RL
Sbjct: 417 KKDKTKTAKQSNSCH-----RPVICICNEPYTPSLRALRAVALIIPVPEVSATKVADRLM 471
Query: 473 HICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV-VGRKDMS 531
I E++K + AL L + + CDIRSCL LQ++ + +G + KD
Sbjct: 472 EISQKENLKVNPDALLGLIKVSGCDIRSCLGALQYMGG-------ISLGDNLSFALKDSR 524
Query: 532 RSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQL 591
+ FD WK+I ++ + S +S + + N G+ + + G+ N +
Sbjct: 525 KGLFDSWKQIL------KIPMNRSGILPLSERVQLVLKTVQN-GETEKLAQGVFHNYPET 577
Query: 592 QYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEW 651
+ + CL D + I Q + Y + H + L +
Sbjct: 578 CNDNFSYIAL--CLQWFQLFDEIFSLIASLQTWSVMPYINYTFVAWHLYFATAGNVKLSY 635
Query: 652 PKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLV-EDSISPLLHILSPPTLRPVA 710
P + I + + R S++ I+P L L P LR V+
Sbjct: 636 PSIAYEMSQKHARNVGILTA--------VQRSSGRNSVILTIDIAPFLPDLLSPQLRTVS 687
Query: 711 LHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFIT 770
HL S KEK+DL +LV+ ++ LT+ K NL + S+D DP I E
Sbjct: 688 GHLHSDKEKDDLNRLVNILIDIGLTFIQEK------NL--DESYD---YKLDPNIFEIGI 736
Query: 771 FKGYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESA 830
F + H L VKQ++V E+E +R+ + A T S
Sbjct: 737 FPDCKY-HRTLTYTVKQIIVQELEAERLRR-------------------AENAIKNTRSI 776
Query: 831 KTNNAAVS-AKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRS 889
++ N ++ +I S S P ++ CN ++ S T ++ + TK +
Sbjct: 777 QSKNEGITNHNVITNSTSDPVAKICN-----------NTASKTNVIEQSKNLQTKTTETK 825
Query: 890 SSSFFDRFRKLSGKVSQDNDNAVQKATVERDSLPLL------FKFNEGFTNAVKRPVRMR 943
FF R + QD N + K + +SL L +K+ EGF+NAV+R V+MR
Sbjct: 826 YKDFFGRII----TIDQDKHNKLDKEPM--NSLNRLTRNGVWYKYKEGFSNAVRRKVKMR 879
Query: 944 DFL 946
+ L
Sbjct: 880 NLL 882
>gi|339239633|ref|XP_003381371.1| ATPase, AAA family [Trichinella spiralis]
gi|316975602|gb|EFV59013.1| ATPase, AAA family [Trichinella spiralis]
Length = 778
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 195/632 (30%), Positives = 300/632 (47%), Gaps = 96/632 (15%)
Query: 197 QLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQ 256
QLW KY P ++ +LLSD+ +NR +L W+K WD+CVF ++ + + L + R +++
Sbjct: 207 QLWSSKYRPRTYIDLLSDDGSNRALLTWMKLWDTCVFNNKPKLNT---LHQVDRKKLLTK 263
Query: 257 NKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLL 316
K+Q T G SK DS + P K+ LL
Sbjct: 264 KKQQKLLFPTTSGDG--------------------SKPELDSLKR-------PLYKIALL 296
Query: 317 CGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM-ADSRPKCL 375
G PG+GKTTLAHV AKHCGY+V E+NASDDRS + + + M + A+ +P C+
Sbjct: 297 WGSPGIGKTTLAHVIAKHCGYYVHEMNASDDRSLDAFSKHLENSLLMTGTLDANPKPHCV 356
Query: 376 VIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPV 435
VIDEIDGA + ++K V++ +KS +K + RP+
Sbjct: 357 VIDEIDGAPLPSVNYLVNLVKGVASGKKS----------------------RKIIVRRPI 394
Query: 436 ICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTE 495
+CICNDLYAP+LR LR+IA IC+ E + AL L + E
Sbjct: 395 VCICNDLYAPSLRELRKIAL------------------ICSEEMLTADQSALDLLCQKAE 436
Query: 496 CDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLR-NSV 554
DIRSC+NTLQFL K + + DI VG+KD+ +S F +W+EIFQ+ + KR R NS
Sbjct: 437 NDIRSCINTLQFLKSKTDHIRYDDIQRLPVGQKDLKKSMFSVWREIFQQPRFKRRRENSN 496
Query: 555 SSSSNVSNE---FDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNS 611
+++ N E F+ + IS + D +FDG+ EN L + + D M L L +
Sbjct: 497 NAADNEKREEMRFESILRTISQCENEDRLFDGLFENFLSVPFRDTWMRSVCNGLQWLQFT 556
Query: 612 DLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKS 671
D++ + I L Y P A+ H L S L++P + +I +
Sbjct: 557 DILKRCINENMLFELNAYFPFAAVAFHFLFSSNAPTKLQYPHLDREAVRCLSRNANILRD 616
Query: 672 WHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVS 731
+S+ I + ++LV + I P L + P ++ L S+ E + V+ M+
Sbjct: 617 IYSETSAKIHSNFDPDTLVLN-ILPFLLWIIQPEIKSTNPQLYSSNETVSIENAVNVMLE 675
Query: 732 YSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLALAVKQVLVH 791
Y+ TY+ K N GN DPP++E + F + L+ + KQ + H
Sbjct: 676 YNATYRQQK-----NEDGN------YDFVLDPPLDEIVQFTSVDTFRPKLSYSAKQTIAH 724
Query: 792 EVEKQRIM------QVTIGKSEHLADGYKENM 817
+++ ++ +T+ KS+ + KENM
Sbjct: 725 KIQMLKLRSDGQQSNLTVEKSQFIR---KENM 753
>gi|343429634|emb|CBQ73206.1| related to CTF18-Chromosome Transmission Fidelity factor [Sporisorium
reilianum SRZ2]
Length = 1122
Score = 263 bits (673), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 231/823 (28%), Positives = 378/823 (45%), Gaps = 123/823 (14%)
Query: 186 RSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVL 245
R E ++WVDK+ P FTELL DE+ +REVL WLK+WD CVF
Sbjct: 361 RDTAETSRAASRMWVDKHRPAKFTELLGDERVHREVLGWLKEWDECVF------------ 408
Query: 246 SALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRS 305
K++N RK ++ + +N ++ +G + W
Sbjct: 409 ------------KRKNH----RKEHHRQYIQAKYGLPDN----SAGDRGGEHMWKDPY-- 446
Query: 306 TGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNS 365
G P+++++++ GPPGLGKTTLAHV H GY+V E+NASD RS+ +E+ I ++ S
Sbjct: 447 -GRPKERIMMISGPPGLGKTTLAHVIGAHAGYNVYELNASDARSAGAVEDVIKMALESGS 505
Query: 366 VMADSRPKCLVIDEIDGALGDGKGA-------VEVILKMVSAERKSNTAKENVAKEDQPE 418
+ D RP +VIDEIDGA G G GA V ++++V + S +A
Sbjct: 506 -LKDPRPTLVVIDEIDGATGGGGGASGESHGFVRALVRLVEMGKGSGPKAAGLASRG--- 561
Query: 419 KISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNE 478
K ++KG K LLRP+ICICNDLYAP+LR+LR ++K+ F +P + VV RL+ +C E
Sbjct: 562 KKQQRKGFKP--LLRPIICICNDLYAPSLRALRPMSKLVRFNKPPTNLVVKRLREVCEAE 619
Query: 479 SMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIW 538
S+ + L+ LAE T DIRSCLN L+F K L + S +G KD + W
Sbjct: 620 SLSVEARGLSLLAELTNGDIRSCLNALEFAKTKNIALTEAAVKSASIGIKDTGGTVHKAW 679
Query: 539 KEIFQKRKTKRLRNSVSSSSNV----------------------------SNEFDFLHS- 569
+ +F+++ K+ S +N +F+ + +
Sbjct: 680 EMLFRRQNRKQAATSSMKGANAHASDGDASPWNSSRKASAQELTSDGKERQKDFNLIDTP 739
Query: 570 ---------LISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMR 620
+++ +YD + G E+ L+ D + + D L +
Sbjct: 740 QENVNRIIHEVTSCNEYDKLAQGCFEHYPTLRAADGGWKRYRQVHDWLYFGQSISTRAWS 799
Query: 621 TQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPK-SYQRY--RNAFMEKMDIFKSWHSKIP 677
L + P + H L + + E+P+ Y+ + +AF DI +P
Sbjct: 800 HGNYELLGFMPWTFVCWHLLFAHVGNALPEYPRVDYENHLKTSAF---NDIATQIVGVLP 856
Query: 678 PYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYK 737
+ + S++ + L+ IL+ P LRP+ L A++K+ A LV+ M S ++ +
Sbjct: 857 ANVRSQFNRHSVITELGPSLMRILT-PDLRPINNQLSRAEDKHAFASLVAVMTSLNIRFV 915
Query: 738 NTK-SDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLA-LAVKQVLVHEVEK 795
K SD G V L +P ++ F F+G RS + AV+Q++ E+E+
Sbjct: 916 QDKISDDEAAATGQTAGQLVYKL--EPLLDVFTQFEGKRSKEIGPSRFAVRQLVAREMER 973
Query: 796 QRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESA----KTNNAAVSAKLIEKSKSLP-- 849
+++ G A+G +E D AG SK+ +A K+ NAA +A+ K+K
Sbjct: 974 L-LLRKNAG-----AEGVEE--DDAG-STSKSATAIYRSKSTNAADAARDAIKNKKEKIA 1024
Query: 850 ---YSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSF---RSSSSFFDRFRKLSGK 903
+ R +++V L S A P G K+ RS+S+ +
Sbjct: 1025 VDFFGRPIVQKSASVPAAL-----SAAVPIPDGMGGKKRKLPEARSASTSELTSAAAATA 1079
Query: 904 VSQDNDNAVQKATVERDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
+ + A ++ D + + ++++EGF+NAV+RP+++ L
Sbjct: 1080 SVESSAPAAAESVASDDKIKVFYRYHEGFSNAVRRPMKISSLL 1122
>gi|443898868|dbj|GAC76202.1| DNA replication checkpoint protein CHL12/CTF18 [Pseudozyma antarctica
T-34]
Length = 1117
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 223/847 (26%), Positives = 376/847 (44%), Gaps = 122/847 (14%)
Query: 160 IDVLLQKVEQEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNR 219
IDV+ QK Q+ ++ S++ R V Q+WVDK+ P FTELL DE+ +R
Sbjct: 333 IDVVEQKEAQDRQSRHAACSADADGVRK------VGSQMWVDKHRPAKFTELLGDERIHR 386
Query: 220 EVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNF 279
EVL WLK+WD CVF K++N RK R ++ +
Sbjct: 387 EVLGWLKEWDECVF------------------------KRKNH----RKERHRQYIQAKY 418
Query: 280 RNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHV 339
+ S +D G P+++V+++ GPPGLGKTTLAH+ H GY+V
Sbjct: 419 GPPTGSFGDKSGDHAFKDP-------HGRPKERVMMISGPPGLGKTTLAHIVGAHAGYNV 471
Query: 340 VEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALGDGKGA-------VE 392
E+NASD RS+ +E+ I ++ S + D RP +VIDEIDGA G G GA +
Sbjct: 472 YELNASDARSAGAVEDVIKMALESGS-LKDPRPTLVVIDEIDGATGGGGGASGESHGFIR 530
Query: 393 VILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQ 452
+++++ + + S++ +A + ++KG K LLRP+ICICNDLYAP+LR LR
Sbjct: 531 ALVRLIESGKGSDSKAGGLAARGK----KQRKGSK--PLLRPIICICNDLYAPSLRPLRP 584
Query: 453 IAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKK 512
+AK+ F +P + VV RL+ +C E++ + L+ LAE T DIRSCLN L+F K
Sbjct: 585 MAKLVRFHKPPTNLVVKRLREVCEAEALSVETRGLSMLAELTSGDIRSCLNALEFAKTKN 644
Query: 513 EILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVS----------- 561
L + + +G KD + W+ +F+++ K+ S +N
Sbjct: 645 MALTEAAVKNAAIGIKDTGGTVQKAWEMLFRRQNRKQAAASSMKGANAQATSAENAPWNS 704
Query: 562 ---------------NEFDF-------------LHSLISNRGDYDVIFDGIHENILQLQY 593
+ DF +H + S +Y+ + G E+ L+
Sbjct: 705 SRKATAPELTMDGKDKQKDFALVDTPQENVSRIIHEVTSCN-EYEKLALGCFEHYPTLRA 763
Query: 594 HDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPK 653
D + + D L + L + P + H L + I E+PK
Sbjct: 764 ADGGWKRYRQVHDWLHFGQCISARAWSNGNFELLGFMPWSFVCWHLLFAHIGNALPEYPK 823
Query: 654 -SYQRY--RNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVA 710
Y+ + +AF E I + +P + + +++ + L+ IL+ P LRP+
Sbjct: 824 VDYENHLKSSAFNE---IVSQIAAALPAGVRSQFNRHAVITELGPSLMRILT-PDLRPIN 879
Query: 711 LHLLSAKEKNDLAQLVSAMVSYSLTYKNTK-SDPLLNNLGNEVSHDVSTLSFDPPINEFI 769
L A++K + LV+ M S ++ + K S+ + +G V L +PP++ F
Sbjct: 880 NQLARAEDKQVFSSLVAVMNSLNIKFVQDKVSEEEVAVVGQSAGTLVYKL--EPPLDVFT 937
Query: 770 TFKGYRSNHYVLA-LAVKQVLVHEVEKQRIM---------QVTIGKSEHLADGYKENMDL 819
F+G RS + AV+Q++ E+E+Q + + I S+ Y+ +
Sbjct: 938 QFEGKRSKDVGPSRFAVRQLVAREMERQLLRKNAGVDGGEEDAISTSKSATAVYRSKGAI 997
Query: 820 AGEEDSKTESAKTNNAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKS 879
AG + + AK V+ + + + + P ++ + + A P
Sbjct: 998 AG---TGPDPAKAKEGKVAVDFFGRP-IVAKAAKVEPLSAVPIPEGMGGKKRKA---PIE 1050
Query: 880 SGDTKKSFRSSSSFFDRFRKLSGKVSQDNDNAVQKATVERDSLPLLFKFNEGFTNAVKRP 939
+G T + + ++ N ++ + ++++EGF+NAV+RP
Sbjct: 1051 TGATAAASTMQGDATPASADEASSAARGEGNTKATGNAGDTNIKVFYRYHEGFSNAVRRP 1110
Query: 940 VRMRDFL 946
++M L
Sbjct: 1111 MKMSSLL 1117
>gi|401884395|gb|EJT48562.1| sister chromatid cohesion-related protein [Trichosporon asahii var.
asahii CBS 2479]
Length = 793
Score = 259 bits (661), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 167/506 (33%), Positives = 258/506 (50%), Gaps = 57/506 (11%)
Query: 307 GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV 366
G P +++LLL GPPG GKTTLAHV AKH GY +E+NASDDRS++T+ +I + + S
Sbjct: 212 GRPRERILLLSGPPGYGKTTLAHVVAKHAGYRTLEINASDDRSAATVSVRIQNAIDAGSG 271
Query: 367 MA-DSRPKCLVIDEIDGALGDGKGA-VEVILKMVSAERKSNTAKENVAKEDQPEKISKKK 424
+ + RP +VIDEIDGA G G + V ++K++ +D P +KKK
Sbjct: 272 LGSEGRPTAVVIDEIDGASGGGDTSFVRSLIKLI---------------QDVP---AKKK 313
Query: 425 GCKKAS-LLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTS 483
G + A L RP+ICICNDLYAPALR LRQ A++ F +P +V+RL+ IC+ E +
Sbjct: 314 GNQPAKPLRRPIICICNDLYAPALRPLRQFARIVRFRKPPTQFIVARLREICDREKLSAD 373
Query: 484 SIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQ 543
+ LTTL E T D+RSCLNTLQ K +++ I S VG KD + W +F
Sbjct: 374 TRVLTTLVELTGGDVRSCLNTLQ---SKSDVVTNDAIKSTSVGAKDSGTTLQATWNTLFV 430
Query: 544 KRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVK 603
K+ R + D + S++ G+YD + G E+ L+ D +
Sbjct: 431 PMAAKQRRKVIGIDDG--RYVDRITSIVQTCGEYDRLVQGCFEHYPNLKPLDASFANVCR 488
Query: 604 CLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPN-----LEWPKS-YQR 657
LD + D ++ I +T + LY Y P V S P EWPK+ Y+
Sbjct: 489 QLDWVAYFDRLNGKISQTMEFELYPYLP---YAVTAWYSHFAAPGNATRPAEWPKADYEL 545
Query: 658 YRNAFMEKM---DIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLL 714
A+ ++ +I +++ + P + S + + + + L+ I+SPP L+PV +++
Sbjct: 546 TLQAYQTRIANEEIARNFMASEQPILRSLFSASATMTELLPLLMRIISPP-LKPVNANIV 604
Query: 715 SAKEKNDLAQLVSAMVSYSLTY---KNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITF 771
+ EK LA+LV M+ L + KN P++ +P I+ FI +
Sbjct: 605 KSSEKAVLARLVELMIPLGLRFWQEKNEDGQPMMR--------------LEPAIDVFIHY 650
Query: 772 KGYRSNHYVLA-LAVKQVLVHEVEKQ 796
+G R+ + AV+Q++ +E +
Sbjct: 651 EGKRAGDIAASRFAVRQLVAQAIEAE 676
>gi|355709817|gb|EHH31281.1| hypothetical protein EGK_12315 [Macaca mulatta]
Length = 911
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 224/801 (27%), Positives = 352/801 (43%), Gaps = 110/801 (13%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LWVD++AP +TELLSD+ TNR +L WLK WD VFG E S + ++
Sbjct: 169 LWVDEFAPRHYTELLSDDFTNRCLLKWLKLWDLVVFGHERPSR--------KPRPSVEPA 220
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
+ +++ K W + LE S+ + K R P Q V LLC
Sbjct: 221 RVSKEATAPGK-----WKSHEQVLEEMLEAGLDPSQRPRQKVRCKPRLRLPGLQ-VALLC 274
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM-ADSRPKCLV 376
GPPGLGKTTLAHV A+H GY VVE+NASDDRS +I QM SV+ A +P CLV
Sbjct: 275 GPPGLGKTTLAHVIARHAGYSVVEMNASDDRSPEAFRTRIEAATQMESVLGAGGKPNCLV 334
Query: 377 IDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVI 436
IDEIDGA A+ V+L +++ + + A P +++ + A L+RP+I
Sbjct: 335 IDEIDGA--RVLAAINVLLSILNRKGPQEAEPQGPAV---PSGGGRRRRAEGALLMRPII 389
Query: 437 CICNDLYAPALRSLRQIAKVHVFIQPS----------------------------VSRVV 468
CICND +AP+LR L+Q A + F R+
Sbjct: 390 CICNDQFAPSLRQLKQQALLLHFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHFPRLC 449
Query: 469 SR------LKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFL-DKKKEILNVMDIG 521
R + + + M+T L L E T+ DIR+C+NTLQFL + + L+V D+
Sbjct: 450 PRGWCSDSRRSVSLRQGMRTDPGVLAALCEKTDNDIRACINTLQFLYSRGQRELSVRDVQ 509
Query: 522 SQVVGRKDMSRSAFDIWKEIFQKRKTKRLR----------------NSVSSSSNVSNEFD 565
+ VG KD R F +W+E+FQ + +R R S ++ S F
Sbjct: 510 ATRVGLKDQRRGLFSVWQEVFQLPRAQRRRVGQDPTLPADTLLLGDGDAGSLTSASQRFY 569
Query: 566 FLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMP 625
+ ++ G+++ + G+ +N L+L+ D + LD L DL+ +Q
Sbjct: 570 RVLHAAASAGEHEKVVQGLFDNFLRLRLRDSSLGAVCAALDWLAFDDLLAGAANHSQSFQ 629
Query: 626 LYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLS 685
L Y P L + H L + P + +P S Q +N + ++ ++ S I P +R +
Sbjct: 630 LLRYPPFLPVAFHVLFASSHTPRITFPSSQQEAQNRMSQMRNLIQTLVSGIAP-AARSRA 688
Query: 686 TESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLL 745
T + LL + P LRPV+ L S +EK LA LV M++YSLTY+ ++
Sbjct: 689 TPQALLLDALCLLLDILAPKLRPVSTQLYSTREKQQLASLVGTMLAYSLTYRQERTPD-- 746
Query: 746 NNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGK 805
G + +P + E F + L KQ++ E+E ++I +
Sbjct: 747 ---GQYIYR------LEPNVEELCRFPELPARK-PLTYQAKQLIAREIEVEKIRRAAALA 796
Query: 806 SEHLADGYKENMDLAGEEDSKTESAKTNNAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTL 865
E + + + + EK P R ++
Sbjct: 797 RA--------------ENSPQVDGSSPGLEGLLGGSGEKGVCRPAPRNHEQRLEHIM--- 839
Query: 866 DSSRSSTASVKPKSSGDTKKSFRSSSSFFDRFRKLSGKVSQDNDNAVQKATVERDSLPLL 925
R + +P+ + RS+++ + +G + + D+ ++ +
Sbjct: 840 ---RRAVREEQPERDFFGRVVVRSTAA------QSAGDTAPEQDSVERRMGTAVGRSEVW 890
Query: 926 FKFNEGFTNAVKRPVRMRDFL 946
F+FNEG +NAV+R + +RD L
Sbjct: 891 FRFNEGVSNAVRRSLYIRDLL 911
>gi|392567141|gb|EIW60316.1| P-loop containing nucleoside triphosphate hydrolase protein
[Trametes versicolor FP-101664 SS1]
Length = 667
Score = 255 bits (651), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 232/773 (30%), Positives = 349/773 (45%), Gaps = 164/773 (21%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LWVD+Y PN FTELL D++ +REVL W+K+WDSCVFG
Sbjct: 35 LWVDRYKPNRFTELLGDDRVHREVLSWVKEWDSCVFG----------------------- 71
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
T K RG + + G+ + NL D W + P++K+LLL
Sbjct: 72 --------TGKARGKKRARGD-EDGENL-----------DEWRR-------PKEKLLLLS 104
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVI 377
GPPGLGKTTLAH+ A H GY EVNASD RS+ ++ +I ++ S + S+P +VI
Sbjct: 105 GPPGLGKTTLAHIVAAHAGYEAFEVNASDARSAEVVDLRIRPALESGSKVGSSKPVLVVI 164
Query: 378 DEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKAS--LLRPV 435
DEIDGA G + A I K++ D+P+K K+G K S L RP+
Sbjct: 165 DEIDGATGGSENAGGFIHKLIQ------------LTYDRPKK-KGKQGEKAQSRPLRRPI 211
Query: 436 ICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTE 495
ICICNDLYA +L LRQ A++ F +P+ ++ RL+ IC E+MK + AL TL +
Sbjct: 212 ICICNDLYAASLAKLRQHARIVRFSRPNDLHIIRRLREICEGENMKADARALATLVGVAQ 271
Query: 496 CDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVS 555
D R CLNTLQ L + + + S G K+ S + ++F KR + +
Sbjct: 272 GDFRGCLNTLQMLKSRNTEVTETMVRSATEGMKEAEASQMVVLNDLFSPLSRKRAKE-LG 330
Query: 556 SSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMH 615
+ L I G D + G E+ L HD + VK ++ + + D M
Sbjct: 331 IREDEPRFVSRLSREIDGCGSIDKVAIGCFEHYALLHRHDGTFSRYVKGMEWICHYDQMS 390
Query: 616 QYIMRTQQMPLYVYQPPLAITV--------HRLVSQIQKPNLEWPKSYQRYRNAFMEKMD 667
MRT + Y P L+ ++ R + ++P +W Q N +
Sbjct: 391 G-TMRTDRE--YSIMPYLSYSLVAFYPLFQERGAQKAERPKADWEHYTQTKTN-----QE 442
Query: 668 IFKSWHSKIPPYIS------RHLSTESLVEDSISPLLH-ILSPPTLRPVALHLLSAKEKN 720
I+ + + S RH S E L++ ++P L+ I+SPP LRPV ++ EK
Sbjct: 443 IYGALAHCLRTAASRCGGGYRHFSNEPLLQLELAPYLNRIISPP-LRPVNSQVIRPAEKA 501
Query: 721 DLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYV 780
LA+LV M + L + K NE V L DPP++ F+T+ G R+
Sbjct: 502 LLARLVDIMATLELRFVQEK---------NEDGQLVYRL--DPPVDVFVTYDGKRAADLA 550
Query: 781 LA-LAVKQVLVHEVEKQRI------MQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTN 833
++ AV+ ++ E++ Q I ++ T GK++ G K+ G+ +K A+ +
Sbjct: 551 VSRYAVRHLVAAEIDAQVIARHAEGLESTKGKTDPFFAGKKKAAADEGQPAAK--RARQD 608
Query: 834 NAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSF 893
+ KL+EK+ + R ++ PK +
Sbjct: 609 D-----KLVEKAAVDFFGR---------------------TIIPKET------------- 629
Query: 894 FDRFRKLSGKVSQDNDNAVQKATVERDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
Q A +KA V R S +KFNEG + AV++PV++ FL
Sbjct: 630 -----------HQSLAKAARKAKVYRVS----YKFNEGNSAAVRKPVKVSAFL 667
>gi|402225108|gb|EJU05169.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dacryopinax sp. DJM-731 SS1]
Length = 539
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 177/610 (29%), Positives = 287/610 (47%), Gaps = 86/610 (14%)
Query: 193 VVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHS 252
VV + LWVD+Y P + +LL D++ +R+ + WLK+WD CVFG +
Sbjct: 6 VVEKHLWVDRYRPKRYLDLLGDDRIHRDTMSWLKEWDHCVFGRK---------------- 49
Query: 253 TISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQK 312
T + KQ+D + +G +D +H+ P +K
Sbjct: 50 TTKRRGKQDDPA---------------------------QEGYEDPYHR-------PYEK 75
Query: 313 VLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRP 372
+LL+ GPPGLGKTTLAHV A GY V E+NASD+R++ ++++I ++ S + +P
Sbjct: 76 ILLISGPPGLGKTTLAHVLATSAGYSVYEINASDERAARVVDDRIRPALEAGSGVGSKKP 135
Query: 373 KCLVIDEIDGALGDGKGAVEVILKMVSAE----RKSNTAKENVAKEDQPEKISKKKGCKK 428
C+VIDEIDG G G + I ++ RK + N K+ +P
Sbjct: 136 VCVVIDEIDGVGGAGVDSNAFINGLIQLTLDKPRKKTAGRRNGQKDVRP----------- 184
Query: 429 ASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALT 488
LLRP+ICICNDLYAP+LRSLRQ A++ P+ + +RL+ +C E +K + AL+
Sbjct: 185 --LLRPIICICNDLYAPSLRSLRQHARLVRVRAPTPIMLTNRLRDVCETEGLKADNRALS 242
Query: 489 TLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTK 548
L T+ DIRSCLNTLQF+ + + + S VG KD S +W +IF K
Sbjct: 243 ALVGVTKGDIRSCLNTLQFIRARTVEVTETVVRSATVGMKDSEMSTQQVWDDIFLPLSKK 302
Query: 549 RLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCL 608
R+R + + S L+ + + D + G ++ + + D K L
Sbjct: 303 RIRQLGLTDAEESKYVARLNFEVEATDEVDRVMQGCFDHYPKARLRDAPWAIFEKAHAWL 362
Query: 609 GNSDLMHQYIMRTQQMPLYV---YQPPLAITVHRLVSQIQKPNLEWPKS-YQRYRNAFME 664
DL + P++ Y+ A+ L P E+P++ Y+ Y A
Sbjct: 363 DAFDLFTG-TFKGGDDPIWALREYRSYFAVAFRPLFINPGNPKAEFPQADYEAYLTAKAN 421
Query: 665 KMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQ 724
+ +I+ ++ ++ +++ + E L + + L I+SPP L+ V ++ A E+ L +
Sbjct: 422 E-EIYATFAKELSTEVTKSFTKEMLPTELLPLLNRIISPP-LKTVNHQVIKADERAMLNR 479
Query: 725 LVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLA-L 783
+V M + + K++ G V DP I+ FIT+ G RS +
Sbjct: 480 VVQLMADTKMRFVQEKTEE-----GQLVYR------LDPAIDVFITYDGKRSADVGASRF 528
Query: 784 AVKQVLVHEV 793
++QV+ +V
Sbjct: 529 GLRQVISKQV 538
>gi|336379950|gb|EGO21104.1| hypothetical protein SERLADRAFT_441488 [Serpula lacrymans var.
lacrymans S7.9]
Length = 904
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 221/773 (28%), Positives = 340/773 (43%), Gaps = 135/773 (17%)
Query: 196 EQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTIS 255
+ LWVD+Y P FTELL +E+ RE + W+KQWD CVFG RR S
Sbjct: 245 DTLWVDRYRPLRFTELLGNERVARETMEWVKQWDWCVFG--------------RRKS--- 287
Query: 256 QNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLL 315
KK R G+ EN N D +H+ P +K+ L
Sbjct: 288 --KK-------RPREGD---------------ENHNP---DDEYHR-------PHEKLFL 313
Query: 316 LCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCL 375
L GPPGLGKTTLAHV A+ GY V+E+NASD RS +E +I ++ S + S+P +
Sbjct: 314 LSGPPGLGKTTLAHVIAQQAGYEVMEINASDARSGLVVEERIQPALESGSAIGSSKPVLI 373
Query: 376 VIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPV 435
+IDEIDGA G G + K+VS D P+K K+ K LLRP+
Sbjct: 374 IIDEIDGATGAGDNTSGFVQKLVSL------------TYDAPKKGKGKQKKDKRPLLRPI 421
Query: 436 ICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTE 495
ICICNDL+APAL LR A+ +P+ +V RL+ IC E +K S ALTTL
Sbjct: 422 ICICNDLHAPALAKLRPHARQVRLTRPADIHIVKRLREICQFEDLKADSRALTTLVGVAR 481
Query: 496 CDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVS 555
D+R CLNTLQF+ K E + I VG K+ + + ++F KR++
Sbjct: 482 GDLRGCLNTLQFIKSKSEEVTEPLIRRATVGMKEADTTVTSVLNDLFAPMSRKRVKELGL 541
Query: 556 SSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMH 615
+ + L + + + + G + + + HD + K D L D
Sbjct: 542 GEDEEARYVNRLSREVEGLNNPNSVAVGCFAHYINCRQHDATLAHYEKANDWLVTFDTFS 601
Query: 616 QYIMRTQQMPLYVYQ-----PPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFK 670
+ L+ Y P ++ R +++K +W ++ QR R I+K
Sbjct: 602 SIMYTDGDFGLHSYLSYFLVPFYSLFKERGAQRVEKDQTDW-ENLQRTRT----NEQIYK 656
Query: 671 SWHSKIPPYIS------RHLSTESLVEDSISPLLH-ILSPPTLRPVALHLLSAKEKNDLA 723
I RHL T + ++ +P ++ I+SPP LRPV ++ E+ L+
Sbjct: 657 DLSQGIRTACGRNAGDYRHLVTGNTLQLEFAPFINRIISPP-LRPVNSQVIKPAERALLS 715
Query: 724 QLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLA- 782
+LV M S L + K++ G V DPPI+ F+T+ G R+ ++
Sbjct: 716 RLVDIMTSLELRFVQEKAED-----GQLVYR------LDPPIDVFVTYDGKRAADIAISR 764
Query: 783 LAVKQVLVHEVEKQRIMQ----VTIGKSEHLADGYKENMDLAGEEDSKTESA--KTNNAA 836
AV+ ++ E++ I + V GK++ D +K + + + N A
Sbjct: 765 YAVRHLVAAEIDAALIARHADAVERGKTK--TDYFKRSGGAGEPAEGGEHGSAEAANTMA 822
Query: 837 VSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDR 896
K I+ S + P N T LT + R FF R
Sbjct: 823 GDLKRIDPSGAGP----ANKRARTDLTDIAD--------------------RPPVDFFGR 858
Query: 897 FRKLSGKVSQDNDNAVQKAT---VERDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
++ + ++ ++AT V++D + ++F EG + AV++P+++ FL
Sbjct: 859 L------ITVPSISSAKEATRKNVKKD-YRVTYRFLEGNSAAVRKPLKLASFL 904
>gi|391345807|ref|XP_003747174.1| PREDICTED: chromosome transmission fidelity protein 18 homolog
[Metaseiulus occidentalis]
Length = 800
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 218/765 (28%), Positives = 333/765 (43%), Gaps = 155/765 (20%)
Query: 195 HEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTI 254
+++LW +KY P SF +LLSD NR VL WLK WD+CVF E++ + +
Sbjct: 178 NDELWTEKYKPKSFRDLLSDAALNRMVLQWLKLWDACVFNKEVK-----------KPPPV 226
Query: 255 SQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVL 314
Q + F R N+E + S P Q V+
Sbjct: 227 PQETNERKRFFQRDQLPEL----------NMELDKSRR----------------PVQPVV 260
Query: 315 LLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM-ADSRPK 373
L+ GPPGLGKTTLAHV A+H GY+VVE+NASDDRS + + QM SV+ + RP
Sbjct: 261 LVAGPPGLGKTTLAHVLARHSGYNVVELNASDDRSPEAFRSALESATQMKSVLDKECRPN 320
Query: 374 CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLR 433
CLVIDEIDGA ++ V+L M+ E P K K K L R
Sbjct: 321 CLVIDEIDGAPSQ---SIAVLLNMLKPE---------------PAAEGKSKKRKPKVLTR 362
Query: 434 PVICICNDLYAPALRSLRQIAKVHVFIQ-PSV--SRVVSRLKHICNNESMKTSSIALTTL 490
PVICICND + PALR LRQ A + IQ PS+ R+ +RL++I E MK S AL L
Sbjct: 363 PVICICNDPWGPALRQLRQNA---ILIQVPSIQTQRLSARLQNILRRERMKYDSAALQAL 419
Query: 491 AEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRL 550
AE T DIRSCL+TLQFL +K +++ D+ + VG KD ++ ++ IF K + +
Sbjct: 420 AEKTGNDIRSCLSTLQFLHSRKGAVSMTDVTATNVGNKDTQQTLGNVLHGIFSKPRETQT 479
Query: 551 RNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKC-LDCLG 609
+ SS++ L+ + GDY+ + + + + Q D M V + L
Sbjct: 480 SGRRARSSDIPG-------LVQSFGDYERVNQALFDTYISRQGLDSEMTSKVPLSSEWLC 532
Query: 610 NSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSY-QRYRNAFMEKMDI 668
+D + IM TQ L Y A H + + + L S+ + Y + K +
Sbjct: 533 FADQVQSVIMSTQNYSLMAYGSFTAARFHTMHASYRPTKLVMNNSHVENYMKSQKMKHHL 592
Query: 669 FKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSA 728
S P +++ + L+E + P + + P L+ + LL+ +++
Sbjct: 593 SSLLSSTTPSMAAQYSGSNILLE--VLPFVFGIIQPQLKSSNVQLLNDEDRTKFRAATGV 650
Query: 729 MVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSF--DPPINEFITFKGYRSNHYVLALAVK 786
M ++ L ++ H SF +P I E + F G + L A K
Sbjct: 651 MSAFGLMFQQ--------------RHIEGRYSFELEPNIEELVRFPGIEQSFTPLTYAAK 696
Query: 787 QVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTNNAAVSAKLIEKSK 846
+ +E Q++ EDS T + V AK + KS
Sbjct: 697 LMFSRTLELQKVR---------------------SSEDSVT-------STVRAKKVTKSL 728
Query: 847 SLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDRFRKLSGKVSQ 906
++ S +++P+ R FF R K K S
Sbjct: 729 ---------------------AQVSKPAIQPE---------RVRKDFFGRVIK---KKSL 755
Query: 907 DNDNAVQKATVER-----DSLPLLFKFNEGFTNAVKRPVRMRDFL 946
+++ Q+ E+ +S + ++F EGF+NAV++ ++++ L
Sbjct: 756 SDESPSQQTEREQEEAKSESYSVYYRFKEGFSNAVRKNLKIKQIL 800
>gi|336367231|gb|EGN95576.1| hypothetical protein SERLA73DRAFT_60018 [Serpula lacrymans var.
lacrymans S7.3]
Length = 753
Score = 252 bits (643), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 186/618 (30%), Positives = 279/618 (45%), Gaps = 93/618 (15%)
Query: 196 EQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTIS 255
+ LWVD+Y P FTELL +E+ RE + W+KQWD CVFG
Sbjct: 115 DTLWVDRYRPLRFTELLGNERVARETMEWVKQWDWCVFG--------------------- 153
Query: 256 QNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLL 315
R+ R G+ EN N D +H+ P +K+ L
Sbjct: 154 -----------RRKSKKRPREGD---------ENHNP---DDEYHR-------PHEKLFL 183
Query: 316 LCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCL 375
L GPPGLGKTTLAHV A+ GY V+E+NASD RS +E +I ++ S + S+P +
Sbjct: 184 LSGPPGLGKTTLAHVIAQQAGYEVMEINASDARSGLVVEERIQPALESGSAIGSSKPVLI 243
Query: 376 VIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPV 435
+IDEIDGA G G + K+VS D P+K K+ K LLRP+
Sbjct: 244 IIDEIDGATGAGDNTSGFVQKLVSL------------TYDAPKKGKGKQKKDKRPLLRPI 291
Query: 436 ICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTE 495
ICICNDL+APAL LR A+ +P+ +V RL+ IC E +K S ALTTL
Sbjct: 292 ICICNDLHAPALAKLRPHARQVRLTRPADIHIVKRLREICQFEDLKADSRALTTLVGVAR 351
Query: 496 CDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVS 555
D+R CLNTLQF+ K E + I VG K+ + + ++F KR++
Sbjct: 352 GDLRGCLNTLQFIKSKSEEVTEPLIRRATVGMKEADTTVTSVLNDLFAPMSRKRVKELGL 411
Query: 556 SSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMH 615
+ + L + + + + G + + + HD + K D L D
Sbjct: 412 GEDEEARYVNRLSREVEGLNNPNSVAVGCFAHYINCRQHDATLAHYEKANDWLVTFDTFS 471
Query: 616 QYIMRTQQMPLYVYQ-----PPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFK 670
+ L+ Y P ++ R +++K +W ++ QR R I+K
Sbjct: 472 SIMYTDGDFGLHSYLSYFLVPFYSLFKERGAQRVEKDQTDW-ENLQRTRT----NEQIYK 526
Query: 671 SWHSKIPPYIS------RHLSTESLVEDSISPLLH-ILSPPTLRPVALHLLSAKEKNDLA 723
I RHL T + ++ +P ++ I+SPP LRPV ++ E+ L+
Sbjct: 527 DLSQGIRTACGRNAGDYRHLVTGNTLQLEFAPFINRIISPP-LRPVNSQVIKPAERALLS 585
Query: 724 QLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLA- 782
+LV M S L + K++ G V DPPI+ F+T+ G R+ ++
Sbjct: 586 RLVDIMTSLELRFVQEKAED-----GQLV------YRLDPPIDVFVTYDGKRAADIAISR 634
Query: 783 LAVKQVLVHEVEKQRIMQ 800
AV+ ++ E++ I +
Sbjct: 635 YAVRHLVAAEIDAALIAR 652
>gi|170087144|ref|XP_001874795.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164649995|gb|EDR14236.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 887
Score = 249 bits (636), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 220/814 (27%), Positives = 348/814 (42%), Gaps = 150/814 (18%)
Query: 153 NSLTSEPIDVLLQKVEQEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELL 212
N+L PI L+ + +A K L + +S E + LWVD+Y P+ FTEL+
Sbjct: 204 NNLLDVPIHRLMDALSSQAVAK-LQKQDQNNVPQSSNESSASEDILWVDRYRPHKFTELM 262
Query: 213 SDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGN 272
+E+ R+ + WLKQWD CVFG +
Sbjct: 263 GNERVARDTMAWLKQWDWCVFGRKRGRKRP------------------------------ 292
Query: 273 RWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAA 332
+GN N + E D +H+ P++K LLL GPPGLGKTTLAHV A
Sbjct: 293 --RDGN----ENFDKE--------DEYHR-------PQEKFLLLSGPPGLGKTTLAHVVA 331
Query: 333 KHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVE 392
GY V+E+NASD RS ++++I ++ S + ++P L+IDEIDGA G G+ +
Sbjct: 332 NQAGYEVMEINASDARSGQIVDDRIRPALEAGSAVGSAKPVLLIIDEIDGATGAGESSNT 391
Query: 393 VILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQ 452
I K+V + K+ + K+ K +LRP+ICICND+ A +L LR
Sbjct: 392 FIHKLVQLTQDKWRKKQRSGQ--------KRDHDVKRPILRPIICICNDVNASSLAKLRP 443
Query: 453 IAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKK 512
A F +PS RL+ IC E +K S AL+TL +CD+RSCLNTLQF+ +
Sbjct: 444 HALQIRFTRPSDVHTAKRLREICEIEGLKADSRALSTLVGLAKCDLRSCLNTLQFVKSRN 503
Query: 513 EILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLIS 572
E + I G S + IF KR++ + S L I
Sbjct: 504 EEVTESVIRRATSGMGAADSSVVSVLNSIFNPLSKKRVKELALTDDEESRYVGRLSHEIG 563
Query: 573 NRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDL------------MHQYIMR 620
G I G + L+ HD + + + + L D +HQY+
Sbjct: 564 ASGRESGIAAGCFGHYALLRRHDANLARHERATEWLTTFDHFSSAMYSDGDFSLHQYLSY 623
Query: 621 TQQMPLY-VYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPY 679
T +P Y ++Q R +I++ +W + N +I+KS+ +
Sbjct: 624 T-LVPFYPLFQ-------ERGGERIERNQADWEHTQLTRTNE-----EIYKSFSGFLRTA 670
Query: 680 IS-----RHLSTESLVEDSISPLLH-ILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYS 733
+ RHL + ++ +PL++ I+SPP LRPV ++ +E+ + +LV M S
Sbjct: 671 VRHGGHYRHLVSTPILHMEFAPLINRIISPP-LRPVNSQIIRPEERALMKRLVHIMASLE 729
Query: 734 LTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLA-LAVKQVLVHE 792
L + +++ V + DPPI+ F+T+ G R+ ++ AV+ ++ E
Sbjct: 730 LRFVQERAE-----------DGVLSYRLDPPIDVFVTYDGKRATDISVSRYAVRHLVAGE 778
Query: 793 VEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTNNAAVSAKLIEKSKSLPYSR 852
++ + I E D A ++EK K +
Sbjct: 779 IDAKLI-----------------------ERD--------------ANIVEKGKRGKHDF 801
Query: 853 QCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDRFRKLSGKVSQDNDNAV 912
N + S L +S S + K T + + + FF R + S + A
Sbjct: 802 FGNSTKSGELDLENSEHPSKRAKKDT----TDVADKPPTDFFGRLITVP---SASSAKAA 854
Query: 913 QKATVERDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
+ VE+ + ++F EG + AV+RPV++ FL
Sbjct: 855 VRKNVEK-KYRVSYRFAEGNSAAVRRPVKINMFL 887
>gi|328869491|gb|EGG17869.1| AAA ATPase domain-containing protein [Dictyostelium fasciculatum]
Length = 813
Score = 249 bits (635), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 181/601 (30%), Positives = 294/601 (48%), Gaps = 82/601 (13%)
Query: 197 QLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQ 256
+LWVDKYAP SF +L+SD++ N+++L WLKQWD VF ++ S+ ++
Sbjct: 155 RLWVDKYAPASFHDLISDDKMNKDILFWLKQWDQLVFRRKVPDKSK----TGNNNTYGFN 210
Query: 257 NKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLL 316
N N+ F +KN + N + N+ + G S GP QKV+LL
Sbjct: 211 NNGNNNPHFIQKNNYTNNYSNNNSSFGNVVVQQPLDDG----------SNGPA-QKVILL 259
Query: 317 CGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLV 376
G PG+GKTTLA + AK GY + E+NASDDRS ++ + SV +PKCL+
Sbjct: 260 TGGPGIGKTTLAKILAKQAGYDIQEINASDDRSGEEFDSLFWGALDTQSVFGSKKPKCLI 319
Query: 377 IDEIDGALGDGKGAVEVILKMVSAERKSNTA-----------------------KENVAK 413
IDEIDG G G +E+ILK++S +++S + ++N+
Sbjct: 320 IDEIDGISGRENGPIEMILKLISNDKRSRKSPSTFKGKENDDNISDNSDDEVEEEKNINT 379
Query: 414 EDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKH 473
+ K++ + RP+ICICND +A +LR LRQ + F +P S++++RLK
Sbjct: 380 KSTTTTTKKQQKKHYPKINRPIICICNDQFAKSLRKLRQEVLIFNFAKPKQSKLLARLKE 439
Query: 474 ICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRS 533
IC E++KT L L E T DIRSCLN L ++ N++ ++G+KD+ +
Sbjct: 440 ICELENLKTDDQTLLMLIEKTNYDIRSCLNHLHLFKTTSQV-NILQDKGTIIGQKDIEKG 498
Query: 534 AFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSL---ISNRGDYDVIFDGIHENILQ 590
D K +F K + S S++ + + ++ L + + D I ++EN
Sbjct: 499 FLDTIKNLFTTGKNLK---SASNNKKIQIDQEYFRELDDELQSSTQLDKIIGALYENFPS 555
Query: 591 LQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLE 650
+D + K+++CL+ L SD+++ YQ + VH L + + P +
Sbjct: 556 NMKNDFNIDKSIECLEWLSYSDIIYD----------EKYQSVAPLAVHSLCNTVA-PKVA 604
Query: 651 WPKS-YQRYRNAFMEKMDIFKSWHSKIPPYISRH--LSTESLVEDSISPLLHILSPPTLR 707
+P++ YQ F++K + S I ++ ++ + V+D +SP + I+S P +R
Sbjct: 605 YPQADYQ----CFLKKEKTLHTIDSFIGTDANKFSSVTKTNFVKDFVSPFIDIISIP-IR 659
Query: 708 PVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVS--TLSFDPPI 765
V L + KEK L L+ M +++TYK HD + TL +PPI
Sbjct: 660 LVNPQLYNLKEKAVLNNLIQIMKYFNITYK----------------HDTTTDTLQLNPPI 703
Query: 766 N 766
+
Sbjct: 704 D 704
>gi|393245719|gb|EJD53229.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 584
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 180/613 (29%), Positives = 286/613 (46%), Gaps = 90/613 (14%)
Query: 193 VVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHS 252
V +QLWVD+Y P FT+LL DE+ +RE + W+KQWD CVFG+ R
Sbjct: 22 VPEDQLWVDRYRPKRFTDLLGDERVHRETMAWVKQWDFCVFGTNRR-------------- 67
Query: 253 TISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQK 312
R + E E N+ +Q + +GPP
Sbjct: 68 ---------------------------RKRQHDEMEEENNDELQRPRERILLLSGPP--- 97
Query: 313 VLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRP 372
GLGKTTLAHV A+ GY+V+E+NASD R+ S I++++ ++ S + +P
Sbjct: 98 --------GLGKTTLAHVVARQAGYNVLEINASDARTGSVIDDRVRPALESGSAVGSKKP 149
Query: 373 KCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKAS-L 431
+VIDEIDGA G G + + K++ D+P K +KK A L
Sbjct: 150 VLVVIDEIDGATGAGDNSGHFVQKLLQ------------LTFDKPVKKGRKKEQGGARPL 197
Query: 432 LRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLA 491
RP+ICICNDLYA +L LR A++ F +P+ +V RL+ IC E M+ + AL+TL
Sbjct: 198 RRPIICICNDLYASSLTKLRPHARIIRFQKPTDLHLVKRLREICEREGMRPDTRALSTLV 257
Query: 492 EYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLR 551
+ D+RSCLN LQF+ KK+ L+ + + + G K+ + + +F +R++
Sbjct: 258 GVAQGDMRSCLNALQFVKAKKQELSEVAVRNATKGMKEADMAFSTVLNNLFTPLSKRRVK 317
Query: 552 NSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNS 611
+ L + G D + G E+ L++ D + + K + L +
Sbjct: 318 ELGLREEEETRYVSRLSREVEASGAIDKVVTGCFEHYTNLRHQDATLERFEKASEWLCHY 377
Query: 612 DLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKS 671
D + + ++ + Y P L + L S+ P +E PK+ + + +I+KS
Sbjct: 378 DAISGVMRTEREYAMLQYLPYLVVPFFPLFSERGAPKVERPKADWEHYLKTKQNQEIYKS 437
Query: 672 W---------HSKIPPYISRHLSTESLVEDSISPLLH-ILSPPTLRPVALHLLSAKEKND 721
+K Y R + +++ +PL++ I+SPP LRPV ++ EK
Sbjct: 438 LTRCVQGDNGGTKASDY--RSMLANGVLQLEFAPLINRIISPP-LRPVNSQVIRPGEKKL 494
Query: 722 LAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVL 781
L +LV MV+ L + KS+ GN V DPPI+ F+T+ G R+ +
Sbjct: 495 LNRLVEIMVALDLRFVQEKSED-----GNLVYR------LDPPIDVFVTYDGKRAADIAV 543
Query: 782 A-LAVKQVLVHEV 793
+ AV+ ++ EV
Sbjct: 544 SRYAVRHLVAAEV 556
>gi|388853899|emb|CCF52397.1| related to CTF18-Chromosome Transmission Fidelity factor [Ustilago
hordei]
Length = 1114
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 203/697 (29%), Positives = 314/697 (45%), Gaps = 106/697 (15%)
Query: 152 SNSLTSEPIDVLLQKVEQEAFNKALNSSSEGQSDRSLPEKPVVH-------EQLWVDKYA 204
++ L PI LL VE + EG++ +P Q+WVDK+
Sbjct: 313 TSQLLERPIHQLLDAVEALKALDVVERDEEGRARARQTPRPTTSAEGVNGTSQMWVDKHR 372
Query: 205 PNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSS 264
P FTELL DE+ +REVL WLK+WD CVF K++N
Sbjct: 373 PAKFTELLGDERVHREVLGWLKEWDECVF------------------------KRKNH-- 406
Query: 265 FTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGK 324
RK R ++ + S++ N + +D + G P+++++++ GPPGLGK
Sbjct: 407 --RKERHRQYIQAKYSYSDHANGSNGSDHIWKDPY-------GRPKERIIMISGPPGLGK 457
Query: 325 TTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGAL 384
TTLAHV H GY+V E+NASD R+S +E+ I ++ S + D RP +VIDEIDGA
Sbjct: 458 TTLAHVIGAHAGYNVYELNASDARTSGAVEDVIKMALESGS-LKDPRPTLVVIDEIDGAT 516
Query: 385 GDGKGA-------VEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVIC 437
G G GA V ++++V + + +A K ++KG K LLRP+IC
Sbjct: 517 GGGGGASGESHGFVRALVRLVEMGKAAGPKAAGLAARG---KKQQRKGYK--PLLRPIIC 571
Query: 438 ICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECD 497
ICNDLYAP+LR LR +AK+ F +P + VV RL+ +C ES+ + L+ LA+ T D
Sbjct: 572 ICNDLYAPSLRPLRPMAKLIRFNKPPTNVVVKRLREVCEAESLSVEARGLSLLADLTNGD 631
Query: 498 IRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSS 557
IRSCLN L+F K L + + +G KD + W+ +F+++ K+ S
Sbjct: 632 IRSCLNALEFAKTKNIALTEAAVKNASIGIKDTGGTVHKAWEMLFRRQNRKQAAASSMKG 691
Query: 558 SNV--------------------------SNEFDF-------------LHSLISNRGDYD 578
+N + DF +H +S+ +YD
Sbjct: 692 ANAHAADAEGSPWNSSRKASAQELTREGKEKQKDFALVDTPQENVSRIIHE-VSSCNEYD 750
Query: 579 VIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVH 638
+ G E+ L+ D + + D L + L + P I H
Sbjct: 751 KLAQGCFEHYPTLRAADGGWKRYRQVHDWLHFGQSISTRAWSHGNYELLGFMPWTFICWH 810
Query: 639 RLVSQIQKPNLEWPK-SYQRY--RNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSIS 695
L + + E+PK Y+ + +AF E I +P + + +++ +
Sbjct: 811 LLFAHVGNALPEYPKVDYENHLKTSAFNE---IASQIVGNLPANVRSQFNRHAVITELGP 867
Query: 696 PLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTK-SDPLLNNLGNEVSH 754
L+ IL+ P LRP+ L A++K LVS M S ++ + K S+ G
Sbjct: 868 SLMRILT-PDLRPINNQLSRAEDKQVFGSLVSIMSSLNIKFVQDKISEEEAAATGQGAGQ 926
Query: 755 DVSTLSFDPPINEFITFKGYRSNHYVLA-LAVKQVLV 790
V L DPP++ F F+G RS + AV+Q++
Sbjct: 927 LVYKL--DPPLDIFTQFEGKRSKEVGPSRFAVRQLIA 961
>gi|307194245|gb|EFN76642.1| Chromosome transmission fidelity protein 18-like protein
[Harpegnathos saltator]
Length = 861
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 224/759 (29%), Positives = 338/759 (44%), Gaps = 129/759 (16%)
Query: 191 KPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRR 250
K +V+++LWVDKY P S+ ELLSDE NRE+L WLK WD +F I S ++
Sbjct: 229 KNIVNDELWVDKYRPRSYIELLSDETVNRELLHWLKLWDKIIFNRNI--------SKIKN 280
Query: 251 HSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPE 310
+ + + F + + E +SKG P
Sbjct: 281 KTKLPE----------------------FGTNEEDKIEEVDSKGY-------------PI 305
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM-AD 369
+++ LL GPPGLGKTTLAH+AA+H GY+VVEVNASD+RS +L +M SV+ AD
Sbjct: 306 KRIALLSGPPGLGKTTLAHIAARHAGYNVVEVNASDERSPDMFRQILLASTEMKSVIGAD 365
Query: 370 SRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKA 429
RP CL+ DEIDGA ++E++LK V + S T K ++Q EK+S GC
Sbjct: 366 PRPNCLIFDEIDGAPA---ASIELLLKFVQGKLISKTKK----GKNQAEKMS--DGCT-- 414
Query: 430 SLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTT 489
RPV+CICN+ YAP LR+LR A + + S R+ RL I E++ L
Sbjct: 415 ---RPVVCICNEPYAPTLRTLRATAVIIPVPEVSPLRLAERLMEIGRKENLTLDFGDLVK 471
Query: 490 LAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKR 549
+AE + CD+RSC+ +Q++ + N+ +G KD ++ FD WK I
Sbjct: 472 IAERSACDVRSCVGAIQYMGNTELKDNLS------LGLKDTRKNLFDSWKSILT---IPI 522
Query: 550 LRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLG 609
R V S VS + + + N G+ D + GI N ++ D + L+
Sbjct: 523 HRGGVVS---VSERIENILRTVQN-GETDKLAQGIFHNYPEV--CDRKLDDVSTSLEWFQ 576
Query: 610 NSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIF 669
DL+ +M Q L Y I H +++Q+ L +P + + I
Sbjct: 577 FYDLITSLVMHKQIWSLMPYTNYGFIAWHLHFARMQRVKLSYPTVFNEVNQRSAKNTGIL 636
Query: 670 KSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAM 729
+ I R T +L D I+ + L P LR V HL S EK LA++V+ M
Sbjct: 637 ----TAIRKVCGR--DTFTLTTD-IAGFMPDLLSPKLRTVPSHLYSPNEKAALARIVNVM 689
Query: 730 VSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLALAVKQVL 789
+ + L++ K N G V + DP I + + H LA AV+Q++
Sbjct: 690 LEFGLSFVQEK-----NPQGGYV------YNIDPNILDVGVLPDCNA-HRCLAYAVQQII 737
Query: 790 VHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTNN-AAVSAKLIEKSKSL 848
E+E +R+ + +I G + + E+SKT T+ + + K EK +L
Sbjct: 738 AQELEVERLKRASISM------GIIDPENATNSENSKTVEKVTDKPSPKNTKQSEKRATL 791
Query: 849 PYSRQCNPSTSTVLTTLDSSRSSTAS-VKPKSSGDTKKSFRSSSSFFDRFRKLSGKVSQD 907
++TT + ++ T + + P+S R S
Sbjct: 792 LKEVVYKDFFGNIITTENKKQNKTINHISPRSQ-------RGYSLM-------------- 830
Query: 908 NDNAVQKATVERDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
N + K + +K+ EG NAV+R V M FL
Sbjct: 831 -QNVLTKHGI-------WYKYKEGCNNAVRRSVFMEKFL 861
>gi|388581933|gb|EIM22239.1| P-loop containing nucleoside triphosphate hydrolase protein
[Wallemia sebi CBS 633.66]
Length = 680
Score = 246 bits (627), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 156/440 (35%), Positives = 228/440 (51%), Gaps = 91/440 (20%)
Query: 184 SDRSLPEKPVVHE--QLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTS 241
S S+P + V +LW DKY P+ FT+L+ D++ NR+V+ WLK+WD CVFG
Sbjct: 73 STSSVPTQKVASSDTRLWTDKYRPHKFTDLMGDDRLNRQVMSWLKEWDQCVFG------- 125
Query: 242 EEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHK 301
KK DS + RK ++ +R+ NL
Sbjct: 126 ----------------KKTADSLYKRKRDAEPFA---YRDPYNL---------------- 150
Query: 302 KTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVV 361
G P+++V+L+ GPPGLGKTTLA+V AK GY V EVNASDDRS+ T++ K+ +
Sbjct: 151 -----GRPQERVMLISGPPGLGKTTLAYVIAKQAGYRVFEVNASDDRSARTVDEKLKSAL 205
Query: 362 QMNSVMADS----RPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
+N + D RP ++IDEIDGA G+G G + +++ N+ + P
Sbjct: 206 DVNPITFDGKIDKRPTLVLIDEIDGATGEGSGGF--VRQLI-----------NITNDHVP 252
Query: 418 EKISKKKGCKKASLL-RPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICN 476
+K +K G + LL RP+ICICNDLYAP+LRSLR I+++ + PS+ V+RLK IC
Sbjct: 253 KK--RKNGTTQPRLLLRPIICICNDLYAPSLRSLRPISRIVRYKPPSMLSTVTRLKDICG 310
Query: 477 NESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGR-KDMSRSAF 535
E M + +L LAE + DIR+CLNTLQF+ N MDI + KD SRS
Sbjct: 311 EEEMYADTKSLNALAEASGGDIRNCLNTLQFMKN-----NEMDIHQAITNNSKDTSRSVP 365
Query: 536 DIWKEIF--QKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQY 593
+ +++F QK KT ++ +V S I G+YD I E L +
Sbjct: 366 SVMQQVFKLQKSKTASVQPTVQS--------------IIECGEYDKISQSCFEGYLTARV 411
Query: 594 HDPVMLKTVKCLDCLGNSDL 613
+D + + ++ L ++D+
Sbjct: 412 NDSRWERYINAINALTDADI 431
>gi|395333885|gb|EJF66262.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dichomitus squalens LYAD-421 SS1]
Length = 743
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 204/779 (26%), Positives = 333/779 (42%), Gaps = 125/779 (16%)
Query: 189 PEKPVV-----HEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEE 243
P KPV + LWVD+Y P+ FTELL D++ +REVL W+K+WD CVFG
Sbjct: 69 PSKPVQLNTTNNANLWVDRYRPSRFTELLGDDRVHREVLAWVKEWDCCVFGKN------- 121
Query: 244 VLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKT 303
KNRG + + + N +++ K S+
Sbjct: 122 ------------------------KNRGRKRARDDADGENLDQWQRPREKASSGSFRLPP 157
Query: 304 RSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQM 363
L KTTLAHV A+H GY+V E+NASD RS+ ++++I ++
Sbjct: 158 FLLLLSGPPGLG--------KTTLAHVVAQHAGYNVFEINASDARSADVVDDRIRPALES 209
Query: 364 NSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKK 423
+ + S+P +VIDEIDGA G + I K++ + + ++ +A P K
Sbjct: 210 GARIGSSKPNLVVIDEIDGATGGSDSSSGFIHKLI--QLTQDRPQKKMAGGRNPH---KS 264
Query: 424 KGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTS 483
G +LRP+ICICNDLYA +L LRQ A++ F +P + VV RL+ IC E +K
Sbjct: 265 GGDAARPVLRPIICICNDLYAASLTKLRQHARIVRFSRPHDTHVVRRLREICEREGVKAD 324
Query: 484 SIALTTLAEYTECDIRSCLNTLQFLDKKKE--------ILNVMDIGSQVVGRKDMSRSAF 535
+ AL TL + D R CLNTLQ L K ++ + S G K+
Sbjct: 325 ARALATLVGVAQGDFRGCLNTLQMLKAKAGGGGAGGGVMVTEPMVRSATRGMKEAEAGQM 384
Query: 536 DIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHD 595
+ ++F +R + + + L + N D + G E+ L HD
Sbjct: 385 AVLNDLFAPLSRRRAKE-MGVREDEPRYVGRLSQAVENCDSLDKVAIGCFEHYANLHRHD 443
Query: 596 PVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSY 655
+ K ++ L D++ + ++ L Y P + + L P +E PK+
Sbjct: 444 ASFERYSKGMEWLCRWDVLMGAMRAEREYALLPYMPYPLVAFYPLFQDRGAPKVERPKAD 503
Query: 656 QRYRNAFMEKMDIFKSWHSKIPPYIS------RHLSTESLVEDSISPLLHILSPPTLRPV 709
+ +I+KS + + RHL++++L++ ++P L+ + P LRPV
Sbjct: 504 WEHYTQTKTNEEIYKSLARCLRTAAARCGGDWRHLASDTLMQLELAPYLNRIVSPPLRPV 563
Query: 710 ALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFI 769
++ EK LA+LVS M + L + K++ G V DPPI+ F+
Sbjct: 564 NSQVIRPAEKAVLARLVSVMANLELRFVQEKTEE-----GQLV------YRLDPPIDVFV 612
Query: 770 TFKGYRSNHYVLA-LAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTE 828
T+ G R+ ++ AV+ ++ E++ Q I + + E
Sbjct: 613 TYDGKRAADIAVSRYAVRHLVAAEIDAQVIAR-------------------------QAE 647
Query: 829 SAKTNNAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFR 888
+ N A SA SK + P KP+ D K + +
Sbjct: 648 GIEKNKAGKSAFFGGASKDKASADDAQPLAK----------------KPRQ--DDKPAEK 689
Query: 889 SSSSFFDRFRKLSGKVSQDNDNAVQKATVERDSL-PLLFKFNEGFTNAVKRPVRMRDFL 946
+ FF R VS+D + + ++ + + +KF EG + AV++PV++ +L
Sbjct: 690 IAVDFFGR-----PIVSKDKPESAKGKNAPKEKVYRVAYKFKEGNSAAVRKPVKVSAWL 743
>gi|164654986|ref|XP_001728625.1| hypothetical protein MGL_4224 [Malassezia globosa CBS 7966]
gi|159102506|gb|EDP41411.1| hypothetical protein MGL_4224 [Malassezia globosa CBS 7966]
Length = 621
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 205/768 (26%), Positives = 332/768 (43%), Gaps = 166/768 (21%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
+WV+KY P +FT+L+ D++ +RE L WLK WD CVFG + S
Sbjct: 1 MWVEKYRPRAFTDLMGDDRLHRETLRWLKTWDPCVFGRDAPPPS---------------- 44
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
R RGN E S + T G P ++VLL+
Sbjct: 45 --------ARSARGN---------------EPSTT----------TDQHGRPHERVLLMS 71
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVI 377
GPPGLGKTTLAHV A+H GY V E+NASD R++ + N++ ++ +S+ RP +VI
Sbjct: 72 GPPGLGKTTLAHVVAQHAGYRVYEMNASDARTAGDVHNRVRSALESDSLQGHGRPTLVVI 131
Query: 378 DEIDGALGDGK-----GAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLL 432
DEIDGA+G + G V +++++ ER + ++ K LL
Sbjct: 132 DEIDGAMGGNEALGTTGFVRALVQLI--ERGARSSH------------------KTRPLL 171
Query: 433 RPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAE 492
RP++CICNDLYAPALR LR +A++ F +P + RL+ IC E + + LT L +
Sbjct: 172 RPIVCICNDLYAPALRPLRPLARIVRFHRPPTPMITRRLREICARECLAADARGLTMLCD 231
Query: 493 YTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRN 552
+ DIR+CL+TL+ L ++ ++V I +G KD IW ++F R +
Sbjct: 232 VSHGDIRACLHTLELLHRQGGSVHVDAIQRASLGMKDSVVPLQHIWTQLF------RALD 285
Query: 553 SVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSD 612
SS + S + LIS DYD + G E+ + L+ + LD L S
Sbjct: 286 QPHSSLHGSRVHALVQELISY-ADYDRLARGCFEHYVHLRVPGQGWQRYESALDWLHFSQ 344
Query: 613 -LMHQYIMRTQQ---MPLYVYQPPLAITVHRLVSQIQKPNLEWP--KSYQRY--RNAFME 664
LMH T Q L + P + H L + + P E+P + Y+R+ A +E
Sbjct: 345 SLMHGAWGGTGQGSAFELLGFVPWAFVAWHMLFANVANPIPEYPPREDYERHLQLTATLE 404
Query: 665 KMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQ 724
+D + +P ++ S ++ + L+ ILSP V+ + + + K L
Sbjct: 405 LVDTLR---GCLPASLAPFYSRRTVACELAPALVRILSPDL--KVSTPVPTRETKAALDA 459
Query: 725 LVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLALA 784
LV M+ L+++ + + H V PPI+ F + G S
Sbjct: 460 LVDTMLMLQLSFEPDRDE-----------HGVVMYRIQPPIDVFGQYAGQASG------- 501
Query: 785 VKQVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTNNAAVSAKLIEK 844
+G S H A Y + A + +T +A ++ A ++
Sbjct: 502 -----------------LVGPSRHGAKQYVQRAIDAEQRRRRTAAALASSGAT----LQD 540
Query: 845 SKSLPYSRQCN-----PSTSTVLTTLDSSRSSTASVK-PKSSGDTKKSFRSSSSFFDRFR 898
+ + + C P+ S T D ++ K P++ T ++ S+SS R
Sbjct: 541 TAAAATAASCEMLPPFPTPSATATYRDFFGRVISTPKVPQTPASTARASPSASSHGPR-- 598
Query: 899 KLSGKVSQDNDNAVQKATVERDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
+ ++++EG++NAV++P+++ L
Sbjct: 599 -------------------------VFYRYHEGYSNAVRKPIKLAALL 621
>gi|302690436|ref|XP_003034897.1| hypothetical protein SCHCODRAFT_51070 [Schizophyllum commune H4-8]
gi|300108593|gb|EFI99994.1| hypothetical protein SCHCODRAFT_51070, partial [Schizophyllum
commune H4-8]
Length = 541
Score = 243 bits (619), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 174/609 (28%), Positives = 283/609 (46%), Gaps = 92/609 (15%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LWVD+Y P FTEL+ +E++ R+V+ W+KQWD CVFG +
Sbjct: 2 LWVDRYRPTRFTELIGNERSARDVMAWVKQWDWCVFGHR-------------------KG 42
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
KK+ N +G+ D +H+ P++K+LL+
Sbjct: 43 KKRP--------------------------REENQEGM-DEYHR-------PQEKLLLMS 68
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVI 377
GPPGLGKTTLAHV A+H GY V+E+NASD RS + +E++I ++ S + +P LVI
Sbjct: 69 GPPGLGKTTLAHVVARHAGYEVMEINASDARSGTEVEDRIRPALESGSAVGSKKPVLLVI 128
Query: 378 DEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKAS-LLRPVI 436
DEIDGA + I K+V K+ +K+ +P +K+ K A +LRP+I
Sbjct: 129 DEIDGAT-SADNSSSFIHKLV------QLTKDEPSKKRRP---GQKRDPKTARPILRPII 178
Query: 437 CICNDLYAPALRSLRQIAKVHVFIQ-PSVSRVVSRLKHICNNESMKTSSIALTTLAEYTE 495
CICND A AL LR A +HV +Q P+ + +V RL+ IC E+++ S AL+ L
Sbjct: 179 CICNDPNASALAKLRPQA-LHVRLQRPADAHIVKRLRQICELEALRADSQALSALVAVAR 237
Query: 496 CDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVS 555
D+R CLNTLQF+ + +N+ + S VG K S + +F +R++
Sbjct: 238 GDMRGCLNTLQFIKARSAEVNLAMVRSATVGMKQAETSVQSVLNSLFAPMSKRRVKELGL 297
Query: 556 SSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMH 615
+ + + L + G + G + L+ HD + + K D L D
Sbjct: 298 TEAEEAKYVARLSHEVDASGRESGVAVGCFAHYASLRQHDATLDRFEKANDWLAAFDAFS 357
Query: 616 QYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLE-----W-----PKSYQRYRNAFMEK 665
+ + L Y P + + L + P +E W ++ + F +
Sbjct: 358 AAMWGDGEFALAPYLPYTLVAFYPLFQERGAPKVERSSDDWEALQMTRANEEIYKTFSQC 417
Query: 666 MDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQL 725
+ + S H RHL+ + ++ +P ++ + P LRPV ++ E+ +A+L
Sbjct: 418 LRVAGSRHGG----AFRHLAIQPALQLEAAPFINRIISPHLRPVNKQIIKPAERAVMARL 473
Query: 726 VSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLA-LA 784
VS M + + + + ++S+ +PPI+ FIT+ G R+ + A
Sbjct: 474 VSLMAAMEFRFLPERGE------DGQLSY-----RLEPPIDVFITYDGKRAADIPASRYA 522
Query: 785 VKQVLVHEV 793
V+Q++ EV
Sbjct: 523 VRQMVAAEV 531
>gi|403174881|ref|XP_003333796.2| hypothetical protein PGTG_15556 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375171358|gb|EFP89377.2| hypothetical protein PGTG_15556 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1043
Score = 243 bits (619), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 231/832 (27%), Positives = 367/832 (44%), Gaps = 156/832 (18%)
Query: 148 VRAHSNSLTSEPIDVLLQKVEQEAFNK-ALNSSSEGQSDRSLPEKPVVH----EQLWVDK 202
+R L EPI +LQ V +E +K AL +S SLP K LW D+
Sbjct: 335 LRKQCLELLDEPIHRMLQAVREEILHKDALAVASA-----SLPPKVETSNPGPRSLWTDR 389
Query: 203 YAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQND 262
Y P F +L+ DE+T R + WLK WD CVF + NK++
Sbjct: 390 YRPVKFIDLIGDERTFRSAMSWLKTWDRCVF------------------KKVESNKRKRQ 431
Query: 263 SSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHK--KTRSTGPPEQKVLLLCGPP 320
S +W N+ G +S+ + +T G P +KVLLL G P
Sbjct: 432 SKVQ-----PQW----------------NANGPSNSFAEAAETDPYGRPHEKVLLLAGKP 470
Query: 321 GLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS---------- 370
GLGKTT+A V A GY V+E+NASDDRSS T+ ++I ++ ++ A +
Sbjct: 471 GLGKTTMAEVLATQAGYQVIEINASDDRSSRTVTDQIKSALESRTLDAGAKFGGGLSLKS 530
Query: 371 -RPKCLVIDEIDGALGDGK----------GAVEVILKMVSAERKSNTAKENVAKEDQPEK 419
RP C++IDEIDGA G G V+ ++K+V+ E SN K N
Sbjct: 531 NRPTCVIIDEIDGAAAGGGGGGGAGGSEAGFVKALVKLVT-EGSSNAPKFN--------- 580
Query: 420 ISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNES 479
SK K + LLRP+ICICNDLYAP LR LR I+++ F P+ +V RL+ IC +E
Sbjct: 581 -SKGKSLDQRPLLRPIICICNDLYAPVLRPLRPISRIIRFNNPTPLTIVKRLQTICKSEK 639
Query: 480 MKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV-VGRKDMSRSAFDIW 538
+ L L + D+RSCLNTLQF+ + L I S V KD S +
Sbjct: 640 LLADLNNLNYLVKLASGDLRSCLNTLQFISTQSTTLTDQIIKSAVEASVKDSGSSIQTVL 699
Query: 539 KEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVM 598
+F K ++ N SS S S D + IS G D I G E+ L ++ +
Sbjct: 700 SHLF-KIPVRKSANKDSSGSKNSYLNDLVRD-ISACGQNDRIIQGCFESYLGMKQPTDLW 757
Query: 599 LKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHR-LVSQIQKPNLEWPK-SYQ 656
+ + L D + I + Q+ L Y P +I + R L+ + ++PK Y+
Sbjct: 758 QTYDRLHEWLDFHDRLETKIWKEQEYQLSGYV-PYSIAIWRELMGNVTNKAPDYPKIDYE 816
Query: 657 RYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSA 716
+ + + + S++S +PP + ++ +V + + L+ ILS LRPV L+
Sbjct: 817 HFLKRSINE-ETLSSFNSHLPPIVKASFKSQEVVCELLPFLIRILS-VDLRPVNSKLIKK 874
Query: 717 KEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRS 776
+EK+ LA+LVS M+ L + KS+ ++S+ + +P ++ + ++G R
Sbjct: 875 EEKDVLARLVSIMIELGLKFVQDKSE------DGQLSY-----TLEPAVDFPVYYEGKRP 923
Query: 777 NHYVLA-LAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTNNA 835
+V+Q++++E+ + A ++D T S+ +
Sbjct: 924 IDIPPPRYSVRQMILNEMNL---------------------LSRARKQDRPTTSSSDAAS 962
Query: 836 AVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFD 895
+A +I K P + + L R T D KK
Sbjct: 963 GTAASIINAYKQKPNGLKSDLPEKVALDFFGRKRVET---------DPKKC--------- 1004
Query: 896 RFRKLSGKVSQDNDNAVQKATVERDSLPLLFKFNEGFTNAVKRPVRMRDFLL 947
DN + + ++ + +L++++EGF+NAVK+ + + ++
Sbjct: 1005 ------------PDNG--QKDLPKEKIKILYRYHEGFSNAVKKGITFNELMM 1042
>gi|338713062|ref|XP_001497373.3| PREDICTED: chromosome transmission fidelity protein 18 homolog
[Equus caballus]
Length = 753
Score = 242 bits (617), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 190/571 (33%), Positives = 277/571 (48%), Gaps = 92/571 (16%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LWVD++AP +TELLSD+ TNR +L WLK WD VFG E R T + R ++
Sbjct: 176 LWVDEFAPQHYTELLSDDFTNRCLLKWLKLWDLVVFGRE-RPTRKP-----RPSVEPARV 229
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
K+ +S ++W S+ + +++ + G P QKV LLC
Sbjct: 230 GKEATAS-------SKW--------------KSHEQVLEEMLEAELDPRGRPRQKVALLC 268
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM-ADSRPKCLV 376
GPPGLGKTTLAHV A+H GY VVE+NASDDRS +I QM SV+ A +P CLV
Sbjct: 269 GPPGLGKTTLAHVIARHAGYCVVEMNASDDRSPEAFRTRIEAATQMESVLGAGGKPNCLV 328
Query: 377 IDEIDGALGDGKGAVEVILKMVSAERKS-NTAKENVAKEDQPEKISKKKGCKKASLLRPV 435
IDEIDGA A+ V+L ++ +RK A+ V E P +++ + L+RP+
Sbjct: 329 IDEIDGA---PTAAINVLLSIL--DRKGPQEAEPGVLVE--PAGGGRRRRAEGGLLMRPI 381
Query: 436 ICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTE 495
ICICND I + M+ AL L E T+
Sbjct: 382 ICICND------------------------------HQISLQQGMQADPGALAVLCEKTD 411
Query: 496 CDIRSCLNTLQFL-DKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSV 554
DIR+C+NTLQFL + + L+V + + VG KD + F +W+EIFQ +++R R
Sbjct: 412 NDIRACINTLQFLHGRGQRELSVRAVQTTHVGLKDQRKGLFSVWQEIFQLPRSQRRRVGQ 471
Query: 555 SSS------------------------SNVSNEFDFLHSLISNRGDYDVIFDGIHENILQ 590
+ S S F + + ++ G+++ + G+ +N L+
Sbjct: 472 DPTLPTHTLLLVDGHAGLGPHAAEVPLSMASQRFYHVLHVAASAGEHEKVVQGLFDNFLR 531
Query: 591 LQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLE 650
L+ D + LD L DL+ + Q L Y P L H L + P +
Sbjct: 532 LRLRDSSLGTVCTALDWLAFDDLLGRAAHHGQSFQLLRYLPFLPAAFHLLFASSHVPRIA 591
Query: 651 WPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVA 710
+P S Q +N ++ ++ S I P + ++LV D++ LL ILS P LRPV+
Sbjct: 592 FPSSQQEAQNRTNRTQNLIQTLVSGIAPATRSQTAPQALVLDALCLLLDILS-PKLRPVS 650
Query: 711 LHLLSAKEKNDLAQLVSAMVSYSLTYKNTKS 741
L SA+EK LA LV M++YSLTY+ ++
Sbjct: 651 TQLYSAREKQQLASLVGTMLAYSLTYRQERT 681
>gi|147825239|emb|CAN64406.1| hypothetical protein VITISV_003510 [Vitis vinifera]
Length = 169
Score = 239 bits (611), Expect = 4e-60, Method: Composition-based stats.
Identities = 121/148 (81%), Positives = 130/148 (87%)
Query: 308 PPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM 367
P + K+LLLCGPPGLGKTTLAHVAAKHCGY VVE+NASDDRSSSTIE KILDVVQMNSVM
Sbjct: 22 PVKYKILLLCGPPGLGKTTLAHVAAKHCGYRVVEINASDDRSSSTIEAKILDVVQMNSVM 81
Query: 368 ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCK 427
ADS+P CLVIDEIDGALGDGKGAVEVILKMVS ERK++ K NVAK D+ +IS KKG K
Sbjct: 82 ADSKPNCLVIDEIDGALGDGKGAVEVILKMVSTERKADNRKGNVAKVDESGQISSKKGHK 141
Query: 428 KASLLRPVICICNDLYAPALRSLRQIAK 455
ASL RPVICICNDLYAPALR LR +AK
Sbjct: 142 TASLSRPVICICNDLYAPALRPLRXVAK 169
>gi|307190445|gb|EFN74480.1| Chromosome transmission fidelity protein 18-like protein
[Camponotus floridanus]
Length = 805
Score = 239 bits (610), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 185/613 (30%), Positives = 284/613 (46%), Gaps = 94/613 (15%)
Query: 194 VHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHST 253
++++LWVDKY P S+ ELLSDE NR++L WLK WD VF I +++ +
Sbjct: 162 INDELWVDKYRPRSYLELLSDETINRQLLYWLKLWDKIVFNRNIIKPKKQL--------S 213
Query: 254 ISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKV 313
+ KK D + NR G P +++
Sbjct: 214 VFGKKKDIDEKTDIEEVDNR---------------------------------GYPIKRI 240
Query: 314 LLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM-ADSRP 372
LL GPPGLGKTTLAH+AA+H GY++VE+NASD+RS T +L +M +V+ AD RP
Sbjct: 241 ALLSGPPGLGKTTLAHIAARHAGYNIVEINASDERSPDTFRQILLASTEMKAVIGADPRP 300
Query: 373 KCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLL 432
CL+ DEIDGA ++E++LK + + S K + Q EK S GC +
Sbjct: 301 NCLIFDEIDGAPA---ASIELLLKFIQGKLISKNKKS----KGQSEKTS--DGC-----I 346
Query: 433 RPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAE 492
RPV+CICN+ YAP LR+LR A + + S R+ RL I E + L +AE
Sbjct: 347 RPVVCICNEPYAPTLRALRAAAIIIPVPEVSPLRLAERLMEIAKKEKLNVDFGDLVKIAE 406
Query: 493 YTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRN 552
+ CD+R+C+ LQ++ N+ D S +G KD ++ FD WK I K R
Sbjct: 407 RSGCDVRACVGALQYMGGA----NLKDNIS--LGLKDTRKNLFDSWKSILTIPMNK--RG 458
Query: 553 SVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSD 612
++ + N + + G+ + + GI N ++ D + L+ D
Sbjct: 459 VITIPERIQNILKTVQN-----GESEKLAQGIFHNYPEI--CDRKLDNVSVSLEWFQFYD 511
Query: 613 LMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSW 672
L+ + Q L Y + H +++ QK L +P + + I +
Sbjct: 512 LITSLVTHKQVWSLMPYTNYGFVAWHLHLARTQKVKLSYPTIISEVIQKSAKNIGILTA- 570
Query: 673 HSKIPPYISRHLSTE--SLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMV 730
+ R + +LV D I+ L L P LR V HL S+KEK DL ++++ M+
Sbjct: 571 -------VRRACGRDAFTLVTD-IAGFLPALLAPKLRIVPSHLYSSKEKADLVRIINVML 622
Query: 731 SYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLALAVKQVLV 790
+ L++ K N G + + DP I E + Y LA AV+Q++
Sbjct: 623 DFGLSFVQEK-----NPQGGYI------YNLDPNILEVGVLPNCNPHRY-LAYAVQQIIA 670
Query: 791 HEVEKQRIMQVTI 803
E+E +R+ + +I
Sbjct: 671 QELEVERLKRASI 683
>gi|53136688|emb|CAG32673.1| hypothetical protein RCJMB04_32h3 [Gallus gallus]
Length = 582
Score = 239 bits (609), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 166/455 (36%), Positives = 233/455 (51%), Gaps = 59/455 (12%)
Query: 114 IDGDCLPVTAPSGGDRVYVKISSSGVEERVKKLDVRAHSNSL--TSEPIDVLLQKVEQEA 171
I GD + VT+ S G RV++ + ++ D + L P L ++V +E
Sbjct: 164 ILGDYINVTS-SEGTRVFMAVRDDSSHIGIELRDSVGWNRPLHLLGVPFSYLKEQVYEEH 222
Query: 172 FNKA----------LNSSSEG------QSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDE 215
+A +NS SE Q + E+P H LWVDK+AP + ELLSD+
Sbjct: 223 RRRAVEASQQLTETINSCSETSDEATEQPGDTGEEEPTPH-CLWVDKFAPRRYIELLSDD 281
Query: 216 QTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWS 275
TNR +L WLK WD+ VFG E ++ H Q+K+Q N+W
Sbjct: 282 YTNRCLLKWLKLWDTVVFGKE--KPVKKAKPGAEAHPPFRQHKEQQ----------NKWK 329
Query: 276 NGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHC 335
LE E HK+ P+ KV LLCGPPGLGKTTLAHV A+H
Sbjct: 330 TKAQLTEEILEAELDQ--------HKR------PKYKVALLCGPPGLGKTTLAHVIARHA 375
Query: 336 GYHVVEVNASDDRSSSTIENKILDVVQMNSVM-ADSRPKCLVIDEIDGALGDGKGAVEVI 394
GY+VVE+NASDDRS T +I QM SV+ A+ +P CL+IDEIDGA ++ V+
Sbjct: 376 GYNVVEMNASDDRSPETFRIRIEAATQMKSVLGAEEKPNCLIIDEIDGA---PTASITVL 432
Query: 395 LKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIA 454
L +++++ + +++ + + LLRPVICICND Y PALR LRQ A
Sbjct: 433 LNIINSKEPEG---------EAAASGGRRRRREGSLLLRPVICICNDQYVPALRPLRQQA 483
Query: 455 KVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEI 514
+ F Q + SR+ RL I + M+ AL L + E DIRSC+NTLQFL + +
Sbjct: 484 FLLSFPQTAPSRLAQRLGEIAQQQGMRADMGALLALCKKAENDIRSCINTLQFLHSRGQK 543
Query: 515 LNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKR 549
+ + + +G KD ++ F IW+EIFQ + +R
Sbjct: 544 ELDVRVQTMKIGLKDQNKGLFSIWQEIFQLPRVQR 578
>gi|322785987|gb|EFZ12603.1| hypothetical protein SINV_09545 [Solenopsis invicta]
Length = 888
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 189/616 (30%), Positives = 285/616 (46%), Gaps = 93/616 (15%)
Query: 191 KPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRR 250
K +++++LWVDKY P S+ ELLSDE NR+ L WLK WD VF
Sbjct: 244 KNIINDELWVDKYRPRSYLELLSDETVNRQFLHWLKLWDKIVF----------------- 286
Query: 251 HSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPE 310
+ I++ K++ F ++N N + I++ S G P
Sbjct: 287 NRNITKPKRKQAPMFGKRN-------------------NDDENSIEE-----VDSKGYPI 322
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM-AD 369
+++ LL GPPGLGKTTLAH+AAKH GY+VVE+NASD+RS T +L +M +VM AD
Sbjct: 323 KRIALLSGPPGLGKTTLAHIAAKHAGYNVVEINASDERSPETFRQILLASTEMKAVMGAD 382
Query: 370 SRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKA 429
RP CL+ DEIDGA ++E++LK + + + ++ Q EK S GC
Sbjct: 383 PRPNCLIFDEIDGAPA---ASIELLLKFIQGKLLLKSK----KRKGQSEKTS-TDGCT-- 432
Query: 430 SLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTT 489
RPV+CICN+ Y P+LR+LR A + + S R+ RL + E + L
Sbjct: 433 ---RPVVCICNEPYTPSLRALRAAAVIIPVPEVSPLRLAERLMDLARKEKLNVDFGDLVK 489
Query: 490 LAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKR 549
+AE + CD+R+C+ LQ++ N+ D S + KD ++ FD W+ I K
Sbjct: 490 MAERSCCDVRACIGALQYMGSA----NLKDNLS--LNLKDTRKNLFDSWRSILTIPMNK- 542
Query: 550 LRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQL--QYHDPVMLKTVKCLDC 607
+ + +++ N G+ + + GI N ++ + D V L L+
Sbjct: 543 -----GGILPIPERIQNILTIVQN-GEMEKLAQGIFHNYPEVCDRKLDNVSLS----LEW 592
Query: 608 LGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMD 667
DL+ I Q L Y I H ++ QK L +P +
Sbjct: 593 FQFYDLVTSLIAHKQIWSLMPYTNYGFIAWHLYFARTQKTKLSYPTVISEVFQKSAKNTG 652
Query: 668 IFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVS 727
I + I R + T L+ D L IL+ P LR V HL S KEK DL+++V+
Sbjct: 653 IL----TAIRRVCGRDVFT--LITDIAGFLPDILA-PRLRTVPSHLYSPKEKTDLSRIVN 705
Query: 728 AMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLALAVKQ 787
M+ + L++ KS + DP I E F + H LA AV+Q
Sbjct: 706 LMLEFGLSFVQEKS-----------PQGGYIYNLDPNILEVGVFPDC-NMHRSLAYAVQQ 753
Query: 788 VLVHEVEKQRIMQVTI 803
++ E+E +R+ +I
Sbjct: 754 IIAQELEVERLKHASI 769
>gi|307110614|gb|EFN58850.1| hypothetical protein CHLNCDRAFT_50360 [Chlorella variabilis]
Length = 1113
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 153/549 (27%), Positives = 244/549 (44%), Gaps = 65/549 (11%)
Query: 431 LLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTL 490
L+RP+ICICNDLYAPALR LR +A+V F +P R+ RL+ IC E + L L
Sbjct: 596 LMRPIICICNDLYAPALRPLRDVARVFHFKKPQAERLAQRLRSICAAEGLACEKSTLRLL 655
Query: 491 AEYTECDIRSCLNTLQ----FLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRK 546
E TECDIRSCLNTLQ FL KK+ ++ D+ VG KDM++ AF +W E+ QK+K
Sbjct: 656 VERTECDIRSCLNTLQARGGFLAKKQSVVRQADLQGLRVGHKDMTKGAFAVWTELLQKKK 715
Query: 547 TKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLD 606
+ + ++ + L+ + + G+ D++ G+HEN+L L+Y D + +T L+
Sbjct: 716 SPGIIGRMAEGE--AQRVARLYGALQDFGEGDLVVGGMHENVLGLRYFDMALQRTSAVLN 773
Query: 607 CLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKM 666
LG++D + R + L Y P + V +V+ +P L+WP++ +
Sbjct: 774 QLGDADAFLRACHRRGEFALLKYVPAPLLLVSGVVAGPDRPQLQWPRAAFDCQRRAAANA 833
Query: 667 DIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLV 726
+SW + P S S+V + + L+HI + P LRPV+LHL S E+ + QLV
Sbjct: 834 ATLQSWMLGMSPAACAATSRRSMVLEVLPALMHIAA-PALRPVSLHLYSPAEQEVMRQLV 892
Query: 727 SAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLS-------------------------- 760
++ Y+L Y DP + + L
Sbjct: 893 DTLLGYNLRY---CLDPAAEEAEEAAAAAAAQLQQPAGGGEAEGGQRQGVRGGRAEPPLR 949
Query: 761 FDPPINEFITFKGYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLA 820
F P ++ F G +L AV+Q + HE + + I
Sbjct: 950 FRPAVHCACLFPGMPPKGKLLPAAVRQTISHEADMEAI---------------------- 987
Query: 821 GEEDSKTESAKTNNAAVSAKLIEKSKSLP--YSRQCNPSTSTVLTTLDSSRSSTASVKPK 878
+ E+++ + S++ P C P + + L + A+
Sbjct: 988 ----RRAEASRRSVHGGGGGGGGGSEAAPPLADANCGPPRAAGVVPLTLAERMKAAGTAA 1043
Query: 879 SSGDTKKSFRSSSSFFDRFR-KLSGKVSQDNDNAVQKATVERDSLPLLFKFNEGFTNAVK 937
S + + ++ D + + + A P+L++F+EG+TNAVK
Sbjct: 1044 SVARRQAAAPPRGTWLDALKERRGARGGGGGGEEGGAAGGRHHKFPVLYRFHEGYTNAVK 1103
Query: 938 RPVRMRDFL 946
RPV MRD L
Sbjct: 1104 RPVLMRDLL 1112
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 121/329 (36%), Gaps = 110/329 (33%)
Query: 108 SRYASEIDGDCLPVTAPSGGDRVYVKI------SSSGVEERVKKLDV----RAHSNSLTS 157
+R I G L VTA G+RVY ++ S+ R + LDV R L S
Sbjct: 264 AREVYRISGASLAVTA-ENGERVYCQLEAPQPPCSTVGTTRSRSLDVAGLLRRARGGLLS 322
Query: 158 EPIDVLLQKVEQEAFNKALNSSSEGQSDRSLPEKPVVHEQ-------------------- 197
+PI LL VEQ+ +++A+ ++ + S Q
Sbjct: 323 DPISTLLAAVEQDQYDRAVAETAAAAATASAAAAAAAQHQPRTPGGRRGERGGSGGAAGR 382
Query: 198 ----LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHST 253
LWV KYAP + +LLSDEQ NREV+ WLK WD CVFG+ +
Sbjct: 383 SSAALWVKKYAPKGYIDLLSDEQINREVVRWLKGWDPCVFGT----------------AA 426
Query: 254 ISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKV 313
Q +Q F + + + G PE K+
Sbjct: 427 PPQRAQQRRDGFPSRLAAHGGAGQQQPGQGGGGGAAD--------------PLGRPEHKI 472
Query: 314 LLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPK 373
+L+ GPPG SVM RP
Sbjct: 473 ILIAGPPG-------------------------------------------SVMGQRRPN 489
Query: 374 CLVIDEIDGALG--DGKGAVEVILKMVSA 400
C+++DEIDGA G +G+ + +LK+V+A
Sbjct: 490 CVIVDEIDGASGGAEGRSGIAALLKIVAA 518
>gi|308813520|ref|XP_003084066.1| sister chromatid cohesion-related (ISS) [Ostreococcus tauri]
gi|116055949|emb|CAL58482.1| sister chromatid cohesion-related (ISS) [Ostreococcus tauri]
Length = 739
Score = 236 bits (602), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 194/699 (27%), Positives = 306/699 (43%), Gaps = 139/699 (19%)
Query: 111 ASEIDGDCLPVTAPSGGDRVYVKISSSGVEERVKKLDVRAHSN----SLTSEPIDVLLQK 166
A +++G+C+ VT G RVY K+ V + ++ SL S PI+ +L +
Sbjct: 34 AVDVEGECVGVTL-GDGRRVYAKMEPRDTP-LVPEEEIYGRGGDPGVSLLSRPIEDMLDE 91
Query: 167 VEQEAFNKA------------LNSSSEGQSDRSLPE----------KPVVHEQLWVDKYA 204
E E A ++ S+ G + R P+ + + LW K+
Sbjct: 92 YEDERNRTAREAALREDEDADIDMSAMGAASRE-PQTAGQRMAERLRGQLRGALWTQKHT 150
Query: 205 PNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSS 264
P +FT+LLS E NREV+ W+K WD VFG R + KK
Sbjct: 151 PRNFTDLLSSEYVNREVVHWIKGWDKVVFG---------------RDPPPATMKKFYSDR 195
Query: 265 FTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGK 324
+ +N + L+ E++ H + +T P +K+LL+ GPPG+GK
Sbjct: 196 YAERN--------GLKKRGPLKSEDT---------HVQLDATKRPMEKILLISGPPGVGK 238
Query: 325 TTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGA- 383
TTLAH+AAKHCGY +++V K+ D + S +PKC++IDEIDG
Sbjct: 239 TTLAHIAAKHCGYELLKV-------------KLADALHSCSAFVQQKPKCVIIDEIDGVH 285
Query: 384 -LGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDL 442
G +GA+ +L + S+K G A L RP+I ICNDL
Sbjct: 286 NAGGDRGAIYAVLNALK---------------------SQKGG---APLSRPIIAICNDL 321
Query: 443 YAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCL 502
Y +LR LR +AKV P + + R++ IC E++ A+ +AE DIRS L
Sbjct: 322 YCTSLRPLRDVAKVIRVKPPPNATLNGRIREICAKENVDVEPRAVALVAERVNNDIRSAL 381
Query: 503 NTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKT---KRLRNSVSSSSN 559
+T+Q + K + + ++ G KD A +W++ + R T RL + S+ +
Sbjct: 382 HTIQLIAKTSSKVTLREVAHAGAGEKDNKPQALTVWQDCLRGRHTFPKSRLESETGSNPH 441
Query: 560 VSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIM 619
++ + I D D +FDG+ ENI ++++ D M + + ++ + + +
Sbjct: 442 MAK----MREKIEVFQDNDAVFDGMFENIPKVRFQDGTMRRMTQAMNAVLDGVMFQTKSF 497
Query: 620 RTQQMPLYVYQPPLAITVHRLVSQIQK--PNLEWPKSYQ--RYRNAFMEKMDIFKSWHSK 675
L Y A+TVH S + WPKS + + RNA +M + S
Sbjct: 498 TAGDHTLRQYAETCALTVHSCASHADALGDDFVWPKSGRAAKERNA---RMATLSARRSA 554
Query: 676 IPPYISRHLSTESLVEDSIS--PLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYS 733
+ I+R SLV D P L+ + P LR V +++ EK L +LV M ++
Sbjct: 555 LDGKIARC----SLVSDVTETLPYLNSILAPELRSVGTTFMTSDEKATLDRLVGLMRAHG 610
Query: 734 -LTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITF 771
LT N D +H PP++EF+ F
Sbjct: 611 CLTAANVDGD----------NH--------PPVDEFVKF 631
>gi|324501627|gb|ADY40722.1| Chromosome transmission fidelity protein 18 [Ascaris suum]
Length = 815
Score = 236 bits (602), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 195/720 (27%), Positives = 315/720 (43%), Gaps = 110/720 (15%)
Query: 96 DDARVEVE--EKFVSRYASEIDGDCLPVTAPSGGDRVYVKISSSGVEERVKKLDV----R 149
D+A VEV E V +Y + V+AP+ G R Y+++ E +++
Sbjct: 113 DEADVEVNSTEGAVLQYPPSDGSPWIGVSAPNFGQRYYIRLRKKLSNESKQRMSTIGWDS 172
Query: 150 AHSNSLTSEPIDVLLQKVEQEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFT 209
A + L S PID +L+ +E + N + E + S H QLWV+KYAP SF
Sbjct: 173 AARSHLNSRPIDEILEAAREELRRQQENLAMEVDTAMSDSVSSSAHTQLWVEKYAPRSFV 232
Query: 210 ELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKN 269
+L+SD++ NR +L WLK WD CVF RS + +L ++ + D T
Sbjct: 233 DLISDDRVNRFLLKWLKLWDECVFK---RSIPDSML----------KSGEDRDDIIT--- 276
Query: 270 RGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAH 329
NG R P QKV+L+ GP G GKTTLA
Sbjct: 277 ----LDNGKPRR---------------------------PSQKVVLIAGPAGFGKTTLAS 305
Query: 330 VAAKHCGYHVVEVNASDDRSSSTIENKILDVVQ-MNSVMADSRPKCLVIDEIDGALGDGK 388
V A+HCGY VVE+NASDDR+ S E KI ++ + ++ D RP CL++DEIDGA D
Sbjct: 306 VTARHCGYRVVEMNASDDRNVSDFERKIEGAIRSVRTLDTDGRPNCLLVDEIDGAPAD-- 363
Query: 389 GAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALR 448
A+ + K ++ + ++ RPVICICN+LY P+LR
Sbjct: 364 -AIRYLCKTLALR-------------------------GRKAIRRPVICICNNLYVPSLR 397
Query: 449 SLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFL 508
LR +A V R+ RL I E ++ + A+ + D+RS +N LQF+
Sbjct: 398 ELRSVALVLQMPHSEQHRLERRLLQIARCEHIRIETGAVAEIINICAQDLRSSINALQFI 457
Query: 509 DKKKEILNVMDIGSQVVGRKDMS-------RSAFDIWKEIFQKRKTKRLRNSVSSSSNVS 561
+ + + G + +S FD+W + + + V S +
Sbjct: 458 AVESSSGVIDHNAVRSYGEHETQLLKCGGEKSLFDVWGAVLEVGRHVDGHGHVLDVSTRT 517
Query: 562 NEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRT 621
D L ++ D G+ N L + + D + + +
Sbjct: 518 CRVDALCQRFASESDR--FHSGLFANYLSTSSGSHRISSISAAARTFCDYDYLSYAVGHS 575
Query: 622 QQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYIS 681
Q L Y ++ +H LV+ Q+ L +P + Q N + ++ + ++ +
Sbjct: 576 QNYELMKYMFASSVQLHLLVASSQRLQLTFPIADQ---NVWQKRRESMETVLTVRADSTQ 632
Query: 682 RHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKS 741
R + ++L+ D + ++ I+ PP L+P+ L SA+E + +V+ M SYSLT+ T
Sbjct: 633 RGIPQQTLILDLLPMIILIVQPP-LKPMNAQLYSARELELVRSVVAIMRSYSLTFTATYQ 691
Query: 742 DPLLNNLGNEVSHDVSTLSFDPPINEFITF---KGYRSNHYVLALAVKQVLVHEVEKQRI 798
D VS+ F PP++ + F + R L+ A +Q++ H++E +R+
Sbjct: 692 D------------GVSSFIFCPPVDVLVLFPIEESDRRRVSFLSNAARQMIAHQIEIERL 739
>gi|449547049|gb|EMD38017.1| hypothetical protein CERSUDRAFT_49624 [Ceriporiopsis subvermispora
B]
Length = 777
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 188/659 (28%), Positives = 319/659 (48%), Gaps = 96/659 (14%)
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA 368
P++K+LLL GPPGLGKTTLAHV A+H GY+V E+NASD RS+ +E++I ++ S +
Sbjct: 194 PKEKILLLSGPPGLGKTTLAHVVAQHAGYNVFEINASDARSAQVVEDRIRPALESGSAVG 253
Query: 369 DSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKK 428
S+P +VIDEIDGA G I K++ N+ E +P+K +KK K
Sbjct: 254 SSKPNLVVIDEIDGATGGSDHTSGFIQKLI-----------NLTFE-RPQKKGRKKDSKS 301
Query: 429 AS-LLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIAL 487
+ LLRP+ICICNDLYA +L LR IA++ F +PS +V RL+ IC E ++ S AL
Sbjct: 302 SRPLLRPIICICNDLYASSLAKLRPIARIVRFSRPSDLHLVRRLRDICAFEGLRAESRAL 361
Query: 488 TTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKT 547
T L + D+R CLN LQ L + + + + G K+ S + ++F
Sbjct: 362 TALVGMAQGDLRGCLNMLQLLKARGKEVTEPAVRMATAGMKEADTSLVIVLNDLFSPLSR 421
Query: 548 KRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDC 607
KR ++ + + + L + G D + G E+ L HD + +K +
Sbjct: 422 KRAKDLGLTEGDEARYVGRLSREVEGTGAMDRVAQGCFEHYANLHQHDSNFDRYLKGHEW 481
Query: 608 LGNSDLMHQYIMRTQQMPL--YVYQPPLA---ITVHRLVSQIQKPNLEWPKSYQRYRNAF 662
L D+M + ++ L Y+ P +A + R ++++P ++W ++Y + +
Sbjct: 482 LSAYDMMSGEMRSEREYALLQYLSYPLVAFYPLFQERGGLKVERPKVDW-ENYMKTKT-- 538
Query: 663 MEKMDIFKSWHSKIPPYIS------RHLSTESLVEDSISPLLH-ILSPPTLRPVALHLLS 715
+I+KS + + RHL+++ +++ ++PL++ I+SPP +RPV ++
Sbjct: 539 --NEEIYKSLAKGLRTASTRHAGDFRHLASDEVLQLELAPLVNRIISPP-IRPVNSQVIR 595
Query: 716 AKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYR 775
E+ L++LV+ MV+ L + K++ G V DPPI+ F+T+ G R
Sbjct: 596 PGERALLSRLVNIMVAMDLRFVQEKAED-----GQLV------YRLDPPIDVFVTYDGKR 644
Query: 776 SNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTNNA 835
++ ++V + V HL +A E D+K S +++
Sbjct: 645 ASD----ISVSRYAVR----------------HL---------VAAEIDAKLISRDADSS 675
Query: 836 AVSAKLIEKSKSLP--YSRQCNPSTSTVLTTLDSSRSSTASVKP-KSSGDTKKSFRSSSS 892
EK K P + R P+ + R + V P K + + + + ++
Sbjct: 676 -------EKDKRKPNFFRRAQEPTDEGPIM----GRDFGSDVLPRKRARPAETAEKVATD 724
Query: 893 FFDRFRKLSGKVSQDNDNAVQKAT-----VERDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
FF R + AV+K + V+ ++++FNEG + AV++PV++ FL
Sbjct: 725 FFGR------PIVASKHEAVRKVSGGNKVVQTQKYRVVYRFNEGNSAAVRKPVKLEAFL 777
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 15/110 (13%)
Query: 153 NSLTSEPIDVLLQKVEQEAFNK-----ALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNS 207
+ L PI L+ ++ A K AL +S S R + V LWVD+Y P
Sbjct: 87 DKLLGVPIHRLMDQLSDAAAQKLVHEDALAASGTNASARQTDQSDV---SLWVDRYRPKC 143
Query: 208 FTELLSDEQTNREVLLWLKQWDSCVFG-------SEIRSTSEEVLSALRR 250
+ +LL D++ +REVL W+K+WD CVFG R+ +EV+ LRR
Sbjct: 144 YADLLGDDRVHREVLAWVKEWDHCVFGRSKGKGKKRARAEDDEVVDELRR 193
>gi|256078697|ref|XP_002575631.1| chromosome transmission fidelity factor [Schistosoma mansoni]
gi|353231986|emb|CCD79341.1| putative chromosome transmission fidelity factor [Schistosoma
mansoni]
Length = 901
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 223/843 (26%), Positives = 344/843 (40%), Gaps = 203/843 (24%)
Query: 197 QLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQ 256
QLW KY+P+++ +L+SDE TNR +L WLK WD VFG+ + T +
Sbjct: 169 QLWTTKYSPSTYLDLISDETTNRTLLRWLKSWDPYVFGTPVPKTQVK------------- 215
Query: 257 NKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLL 316
SN N + Y++++ + I + + G P +++L+
Sbjct: 216 ------------------SNTNL---GPVPYKSNDIEAIAGEINPRD---GLPRYRLILI 251
Query: 317 CGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS------ 370
GPPGLGKTTLAH+ A+H GY V+E+NASDDRS + +++ +V ++ + S
Sbjct: 252 SGPPGLGKTTLAHLLAQHAGYQVIEINASDDRSLGVLRDRLTAIVSSSTSLNTSKKTNFG 311
Query: 371 ------RPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKK 424
+P CL++DEIDGA+ V E +N AK + + ++ ++
Sbjct: 312 NHETKLKPCCLIMDEIDGAMP------------VVVELLANAAKNTLPSNTERQQQRNRR 359
Query: 425 GCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSV---SRVVSRLKHICNNESMK 481
L RPVICICNDLY+P++R+LR + I+ + R+VSRL I E +
Sbjct: 360 ANPPLVLRRPVICICNDLYSPSIRALRAPGIPCLTIRIPIVDLGRLVSRLDLITKTEGLS 419
Query: 482 TSSIALTTLAEYTECDIRSCLNTLQFLDKKKEI----------LNVMDIGS----QVVGR 527
I LT L E ++ DIRSCLNTLQFL K + L+ DI S G
Sbjct: 420 IDKITLTQLVEMSDRDIRSCLNTLQFLSSVKSLDNNINHKLGCLSANDILSLSQFHNGGL 479
Query: 528 KDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNV-------------------SNEFDFLH 568
KD+ + FD+WK +F ++ L N + S S ++
Sbjct: 480 KDVQKGIFDVWKAVFTIPSSRLLSNRRITKSECNNNNNNNARRRNGKNHDTQSARLAYIM 539
Query: 569 SLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYV 628
+I D+ + GI EN L D + + + DL++ + L
Sbjct: 540 GVIEASTDHQQVTLGIFENYLYGHLKDATLRVARQASEWFVFDDLLNTCVHTKSNYSLLR 599
Query: 629 YQPPLAITVHR-------LVSQIQKPN------------LEWPKS---YQRYRNAFMEKM 666
Y L H L + N L WP + R+ ++ +
Sbjct: 600 YANFLPCWFHMALATPSGLFNTFNTANNTSTGNVKSVGGLRWPSAPSETAATRSHYLAIL 659
Query: 667 DIFKSWHSKIPPYIS----------RHLSTESLVEDSISPLLHILS--PPTLRPVALHLL 714
D S +P S R L + D L+ +LS TLRP++ L
Sbjct: 660 DQLYSNQWNLPQCKSDKSVSNFSSFRFLPRRHFLLDMAPTLITLLSLIASTLRPLSAQLY 719
Query: 715 SAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGY 774
S +EK L LV+ M++ L + + NEV + + +PP++ F
Sbjct: 720 SQQEKLALDNLVNLMLNLGLNWLAEQDSE-----SNEVKYQL-----NPPLDLVACFTK- 768
Query: 775 RSNHYVLALAVKQVLVHEVEKQRI------MQVTIGKSEHLADGYKENMDLAGEEDSKTE 828
S+ L KQ + E+E +R+ + + KSE D K N + E TE
Sbjct: 769 SSSLNSLGYGTKQFIARELEIERVRRSESMINRDVNKSEVCNDITKLNSKPSLENLMDTE 828
Query: 829 SAKTNNAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFR 888
S K +KLI KS +
Sbjct: 829 SQK-------SKLI----------------------------------------GTKSSK 841
Query: 889 SSSSFFDRF----RKLSGKVSQDNDNAVQ-KATVERDSLPLLFKFNEGFTNAVKRPVRMR 943
FF R +S + D Q + V+RD + ++F EG++NAV+RPV M+
Sbjct: 842 VKKDFFGRVINDKMNISNTANTTEDCGEQGEFIVDRD---IYYRFKEGYSNAVRRPVTMK 898
Query: 944 DFL 946
+FL
Sbjct: 899 EFL 901
>gi|444727272|gb|ELW67773.1| Chromosome transmission fidelity protein 18 like protein [Tupaia
chinensis]
Length = 907
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 185/623 (29%), Positives = 282/623 (45%), Gaps = 122/623 (19%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LWVD++AP + ELLSD+ TNR +L WLK WD VFG E A + +
Sbjct: 279 LWVDEFAPRRYPELLSDDFTNRCLLKWLKLWDPVVFGREK--------PARKPRPGVEPA 330
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
+ + + RW S+ + ++ + S+ P KV LLC
Sbjct: 331 RAVREVPAS-----GRW--------------KSHEEMLEGVLGAELDSSLRPRHKVALLC 371
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM-ADSRPKCLV 376
GPPGLGKTTLAHV A+H GY VVE+NASDDRS +I QM SV+ A +P CLV
Sbjct: 372 GPPGLGKTTLAHVIARHAGYCVVEMNASDDRSPEAFRMRIEAATQMESVLGAGGKPNCLV 431
Query: 377 IDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVI 436
IDEIDGA AV V++ +++ RK +E A P +++ + A L RP+I
Sbjct: 432 IDEIDGA---SAAAVNVLVCILN--RKGPQGQELGAP---PLGGGRRRRVEGAPLTRPII 483
Query: 437 CICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTEC 496
CICND +APALR L+Q A + F SR+V RL
Sbjct: 484 CICNDQFAPALRQLKQQAFLLHFPPTLPSRLVQRL------------------------- 518
Query: 497 DIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLR----- 551
++ L+V + + VG KD + F +W+E+FQ + +R R
Sbjct: 519 --------------QERELSVQAVRATRVGLKDQRKGLFSVWQEVFQLPRAQRQRAGQHP 564
Query: 552 ---------NSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTV 602
++ S + S F + + ++ G++D + G+ +N L+L+ D +
Sbjct: 565 AQPAHLLGDHAPGSLTAASQRFFRVLQVAASAGEHDKVVQGLFDNFLRLRLRDSSLGTVC 624
Query: 603 KCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAF 662
LD LG + +QQ PP ++ +P + W R+A
Sbjct: 625 TGLDGLGLRHVPRIAFPSSQQE----VGPP---------ARRPRPEVGWEGKGDPARSAP 671
Query: 663 MEKM-------DIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLS 715
+ ++ ++ I P I ++ ++LV D++ LL + P LRPV+ L S
Sbjct: 672 TQAQSRTSQTWNLIQTLVLGIAPAIRSRVAPQALVLDTLC-LLLDILTPRLRPVSTQLYS 730
Query: 716 AKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYR 775
A+EK LA LV M++Y+LTY+ ++ + DP + E F
Sbjct: 731 AREKQQLAGLVGTMLAYNLTYRQERT-----------PDGQYVYALDPNVEEVCRFPELP 779
Query: 776 SNHYVLALAVKQVLVHEVEKQRI 798
+ H L KQ++ HEVE +++
Sbjct: 780 A-HKPLTYQAKQLIAHEVEVEKM 801
>gi|358346972|ref|XP_003637537.1| Chromosome transmission fidelity protein [Medicago truncatula]
gi|355503472|gb|AES84675.1| Chromosome transmission fidelity protein [Medicago truncatula]
Length = 382
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 138/290 (47%), Positives = 185/290 (63%), Gaps = 28/290 (9%)
Query: 47 INGHKRPRSDTPKSPIDVDE--PQFDEKRSRIVDN---DDEDWLRYSPPPPQARDDARVE 101
+N HKR RS++ + ++ R R+ ++ ++EDWLR PPP + V
Sbjct: 27 VNSHKRSRSNSDSDLDLDSSDVEKSEKVRVRVAEDAPAEEEDWLR---PPPTSDTVEEVR 83
Query: 102 V-EEKFVSRYASEIDGDCLPVTAPSGGDRVYVKISSSGVEERVKKLDVRAHSNSLTSEPI 160
++K +SR+ASEIDG+ + VTAP+G DRVY K+ E+RV+KL+ R S+ L EPI
Sbjct: 84 FSKDKTLSRFASEIDGEVMTVTAPNG-DRVYTKLDRYYGEDRVRKLNCRGDSSDLAVEPI 142
Query: 161 DVLLQKVEQEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNRE 220
VLL++++QE F K L +SSE QS +PE VHE+LWVDKYAP SFT+LLSDEQTNRE
Sbjct: 143 SVLLERLDQENFAKTLEASSESQSVVDVPETLTVHEKLWVDKYAPKSFTDLLSDEQTNRE 202
Query: 221 VLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGN-------- 272
VLLWLKQWDS VFGSEIRSTS++VLSAL+RHS+IS K S+F R G+
Sbjct: 203 VLLWLKQWDSTVFGSEIRSTSDDVLSALKRHSSISHKPKPLASNFPRTKGGHNWSSNSSS 262
Query: 273 ---RWSNGNFRNSNNLEY-------ENSNSKGIQDSWHKKTRSTGPPEQK 312
R G+ +SN+ Y E+ +S QD+ + K+R+TG PEQK
Sbjct: 263 NFSRTRGGHTWSSNSSRYTNFKSTDESGSSNSFQDTRNAKSRNTGAPEQK 312
>gi|392595577|gb|EIW84900.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coniophora puteana RWD-64-598 SS2]
Length = 701
Score = 228 bits (580), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 185/654 (28%), Positives = 296/654 (45%), Gaps = 74/654 (11%)
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA 368
P +K+LL+ GPPGLGKTTLAHV A GY V+E+NASD RS+ I++++ ++ S +
Sbjct: 106 PREKLLLISGPPGLGKTTLAHVVAAQAGYEVMEINASDARSAQVIDDRLKPALESGSAIG 165
Query: 369 DSRPKCLVIDEIDGALGDGK-GAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCK 427
++P +VIDEIDGA G G + K+VS DQP+ KK+
Sbjct: 166 SNKPVLVVIDEIDGATGGGGDNTSSFVQKLVSL------------TYDQPKNKRKKQDKG 213
Query: 428 KASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIAL 487
K LLRP+ICICND+ A +L LR A +P+ +V RL+ +C E +K S AL
Sbjct: 214 KRPLLRPIICICNDINAHSLAKLRPHALQIRCTRPADIHIVKRLRQVCEMEGLKADSRAL 273
Query: 488 TTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKT 547
+TL + D+R CLNTLQF+ + E + I G K+ +A + ++F
Sbjct: 274 STLVGIAKGDLRGCLNTLQFIKSRSEDVTEPLIRRSTAGMKEADTTANSVLNDLFAPMSK 333
Query: 548 KRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDC 607
KR++ + + L I + I G + HD + + K +
Sbjct: 334 KRVKELGMGEEEEARYVNRLSRTIEGMNSFASIATGCFAHYTNCHRHDADLSRYGKANEW 393
Query: 608 LGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLV-----SQIQKPNLEWPKSYQRYRNAF 662
L D+ + + L+ Y L + H L ++++ +W ++ QR R
Sbjct: 394 LTTYDIFAAMMYQDGDFGLHSYLSYLLVPFHPLFKARGGQRVERDATDW-ENLQRTR--- 449
Query: 663 MEKMDIFKSWHSKIPPYIS------RHLSTESLVEDSISPLLH-ILSPPTLRPVALHLLS 715
DI+K+ S I S RHL T ++ P ++ I+SPP LRPV ++
Sbjct: 450 -VNEDIYKTLASNILAASSRNCGTYRHLVTGQALQLEFGPFINRIISPP-LRPVNRQIIK 507
Query: 716 AKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYR 775
A E+ L++LV MV+ L + K++ T DPPI+ F+T+ G R
Sbjct: 508 AGERELLSRLVDIMVAMELRFIQEKTE-----------EGALTYRLDPPIDVFVTYDGKR 556
Query: 776 SNHY-VLALAVKQVLVHEVEKQRIMQV--TIGKSEHLADGYKENMDLAGEEDSKTESAKT 832
+ V AV+Q++ E++ I + I +S+ + G ++ + E
Sbjct: 557 AADISVSRYAVRQLVAGEIDNALIARHADAIERSKTKPSNFFSKQS-KGHDNDEHEGTNV 615
Query: 833 NNAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSS 892
N+A + + S P RQ R+ T ++ K D
Sbjct: 616 NDADGKLRRLSLDDSKPSKRQ---------------RTETQEIEEKPPVD---------- 650
Query: 893 FFDRFRKLSGKVSQDNDNAVQKATVERDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
FF R ++ S ++ K RD + ++F EG + AV++PV++ FL
Sbjct: 651 FFG--RPIAIHTSNSHNKPASKKAPRRD-YHVSYRFLEGNSAAVRKPVKVSSFL 701
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 47/82 (57%), Gaps = 7/82 (8%)
Query: 153 NSLTSEPIDVLLQKVEQEAFNKALN-SSSEGQSDRS-LPEKPVVHEQLWVDKYAPNSFTE 210
L PI L+ + E KAL S EG+S + +P K V E LWVD+Y P FTE
Sbjct: 2 GGLLDIPIHRLMDDLSTE---KALRLSREEGESASARIPSK--VEETLWVDRYRPLRFTE 56
Query: 211 LLSDEQTNREVLLWLKQWDSCV 232
LL +E+ RE + W+KQWD CV
Sbjct: 57 LLGNERVARETMAWVKQWDWCV 78
>gi|426199878|gb|EKV49802.1| hypothetical protein AGABI2DRAFT_63250, partial [Agaricus bisporus
var. bisporus H97]
Length = 551
Score = 227 bits (578), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 176/610 (28%), Positives = 278/610 (45%), Gaps = 101/610 (16%)
Query: 196 EQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTIS 255
+ LWVD+Y P FT+L+ +++ RE + W+KQWD CVF
Sbjct: 2 DTLWVDRYRPTCFTDLIGNDRVARETMAWVKQWDYCVF------------------GKKK 43
Query: 256 QNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLL 315
K+Q D E EN N+ D +H+ P +K+LL
Sbjct: 44 GKKRQRD-----------------------EDENFNA---DDEYHR-------PREKMLL 70
Query: 316 LCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCL 375
L GPPGLGKTTLAH+ A+H GY VVE+NASD R + I ++I ++ S + ++P +
Sbjct: 71 LSGPPGLGKTTLAHIVARHAGYDVVEINASDARGGNVINDRIRPTLESGSSVNGTKPVLV 130
Query: 376 VIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPV 435
+IDEIDGA G G I +V + + K +++ K+ + LLRP+
Sbjct: 131 IIDEIDGATGAGDNTSSFIHNLVQFTQNTRGKK---------KRLGNKQVNAQRPLLRPI 181
Query: 436 ICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTE 495
ICICND+ A +L LR A F +P+ V RL+ IC NE +K AL L
Sbjct: 182 ICICNDINASSLVKLRPHAYQVRFTRPADFHTVRRLQEICGNEKLKADVRALGVLVAMAR 241
Query: 496 CDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVS 555
D+R C+NTLQF+ +KE + I G K+ S + +IF KR+++
Sbjct: 242 GDLRGCINTLQFVKSRKEDVTETVIREATKGMKEAETSVVSVLNDIFSPLTKKRVKDLAL 301
Query: 556 SSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMH 615
+ S + L I G I +G L + Y +L + + D
Sbjct: 302 TEEQESRYINRLSFEIEGSGKDAAIANGSGNEWL-ITYD---LLSS----SMFADGDFAL 353
Query: 616 QYIMRTQQMPLY-VYQPPLAITVHRLVS-----QIQKPNLEWPKSYQR-YRNAFMEKMDI 668
+ +P Y ++Q + + R S Q+ K N E +S+ R R+A +
Sbjct: 354 LSYLPFTLVPFYPLFQARSSQRIERNYSDWEHHQVTKSNEEIYESFARCLRSASLRCGGA 413
Query: 669 FKSWHSKIPPYISRHLSTESLVEDSISPLLH-ILSPPTLRPVALHLLSAKEKNDLAQLVS 727
+ RHL T ++ +PL++ I+SPP LRPV ++ +E+ L +LV
Sbjct: 414 Y------------RHLVTSPTLQLEFTPLINRIISPP-LRPVNRQVIRPEERLLLERLVE 460
Query: 728 AMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLA-LAVK 786
M + L + +++ ++S+ DPPI+ FIT+ R+N + A++
Sbjct: 461 IMAALELRFVQDRAE------DGQLSY-----RLDPPIDVFITYDAKRANDIAPSRYAIR 509
Query: 787 QVLVHEVEKQ 796
++ EV+ +
Sbjct: 510 HLVATEVDTK 519
>gi|297741995|emb|CBI33782.3| unnamed protein product [Vitis vinifera]
Length = 168
Score = 225 bits (574), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 112/140 (80%), Positives = 121/140 (86%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSR 371
++LLLCGPPGLGKTTLAHV AKH GY VVE+NASDDRSSSTIE KILDVVQMN VMADS+
Sbjct: 29 QILLLCGPPGLGKTTLAHVVAKHYGYRVVEINASDDRSSSTIEAKILDVVQMNFVMADSK 88
Query: 372 PKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASL 431
P CLVIDEIDGALGDG+GAVEVILKMVS ERK++ K NVAK D+ +IS KKG K ASL
Sbjct: 89 PNCLVIDEIDGALGDGRGAVEVILKMVSTERKADNRKGNVAKVDESGQISSKKGHKTASL 148
Query: 432 LRPVICICNDLYAPALRSLR 451
RPVICICN LYAPALR LR
Sbjct: 149 SRPVICICNGLYAPALRPLR 168
>gi|328856117|gb|EGG05240.1| hypothetical protein MELLADRAFT_36957 [Melampsora larici-populina
98AG31]
Length = 572
Score = 225 bits (574), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 176/615 (28%), Positives = 280/615 (45%), Gaps = 89/615 (14%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LW D+Y P F +L+ DE+ R + WLK+WD CVF E + S ++ R
Sbjct: 3 LWTDRYRPTKFIDLIGDERVFRSAMSWLKEWDQCVFKHERSAASRRKVAKKRSAQAAFAA 62
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
+ ++ NF G P++KVLLLC
Sbjct: 63 SAKGPAT-------------NFTPD----------------------PLGRPQEKVLLLC 87
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV----------- 366
G PGLGKTT+AHV A+ GY +VE+NASDDR++ + +I ++ ++
Sbjct: 88 GAPGLGKTTMAHVLAQQAGYDIVEINASDDRTTKVVTERIKSALETRTLDSGARQGGGMT 147
Query: 367 MADSRPKCLVIDEIDGALGDGKGA-VEVILKMVSAERKSNTAKENVAKEDQPEKISKKKG 425
D+RP C++IDEIDGA G G V+ ++K+++ + +++ K
Sbjct: 148 FKDNRPTCVIIDEIDGAAGGSDGGFVKALVKLIT--------------DGLLYPLARGKK 193
Query: 426 CKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSI 485
+ L+RP+ICICNDLYA LR LR IA++ F P+ ++ RL+ IC+ E +K
Sbjct: 194 AEIKPLVRPIICICNDLYAQTLRPLRSIARIIRFATPTPMTIIKRLQTICDMEKLKADLR 253
Query: 486 ALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGS-QVVGRKDMSRSAFDIWKEIFQK 544
LT L + D+RSCLNTLQ + + + + I S +VG KD+ S I ++F+
Sbjct: 254 NLTFLVKIASGDLRSCLNTLQAVQSQSSVASESAIRSAAIVGMKDVGTSVRSILSKLFKL 313
Query: 545 RKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKC 604
K + S SS++S L I G+++ I G E L + +
Sbjct: 314 PKKAKEGESGLDSSSLSE----LVQDIETCGEHNRIIQGCFEYYLSAKRPTDLWATYESV 369
Query: 605 LDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFME 664
+ L SD + I Q + Y P + L+ +I E+P+
Sbjct: 370 HEWLNFSDRLELKIKSEQSYSMTFYFPFVIAAWRELMGKISNTAPEYPRIDYEMSLKTAA 429
Query: 665 KMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQ 724
+ S+ +PP + TE ++ + I L+ I+S P LRPV L+ +E++ + +
Sbjct: 430 HQEFLASFRQAMPPLMRVSFMTEVVISELIPHLMRIIS-PDLRPVNSQLIRREERDVMMR 488
Query: 725 LVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDV---STLSF--DPPINEFITFKGYRSNHY 779
+V+ M+ +LG ++ HD LSF DPPI+ F ++G R
Sbjct: 489 VVNIML----------------DLGLKLIHDKGEDGQLSFVLDPPIDLFTQYEGKRPQDI 532
Query: 780 -VLALAVKQVLVHEV 793
V+Q++ EV
Sbjct: 533 PAPRYGVRQMIAREV 547
>gi|332025622|gb|EGI65784.1| Chromosome transmission fidelity protein 18-like protein
[Acromyrmex echinatior]
Length = 864
Score = 225 bits (573), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 220/769 (28%), Positives = 332/769 (43%), Gaps = 180/769 (23%)
Query: 193 VVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHS 252
+++++LWVDKY P S+ ELLSDE NR++L WLK WD VF V+ ++
Sbjct: 261 MINDELWVDKYRPRSYIELLSDETVNRQLLHWLKLWDKIVF-------KRNVIKPKKKLP 313
Query: 253 TISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQK 312
T + +D E +SKG P ++
Sbjct: 314 TFGKKDNVDDKKDI---------------------EEVDSKGY-------------PIKR 339
Query: 313 VLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM-ADSR 371
+ LL GPPGLGKTTLAH+AAKH GY+VVE+NASD+R+ +L +M +VM AD R
Sbjct: 340 IALLSGPPGLGKTTLAHIAAKHAGYNVVEINASDERTPDKFRQILLASTEMKAVMGADPR 399
Query: 372 PKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASL 431
P CL+ DEIDGA ++E++LK + + K++Q E +S GC
Sbjct: 400 PNCLIFDEIDGAPA---ASIELLLKFTQGKLIAKKK----KKKEQSENMS--DGCT---- 446
Query: 432 LRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLA 491
RP+ICICN+ YAP+LR+LR +A + + S R+ RL + E + L +A
Sbjct: 447 -RPIICICNEPYAPSLRALRAVAVIIPIQEVSPLRLAERLMDLARKEKLNVDFNDLVKIA 505
Query: 492 EYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQK--RKTKR 549
E + CD+R+C+ LQ++ N+ D S +G KD +R + + IF R
Sbjct: 506 ERSGCDVRACIGALQYMGSS----NLKDNLS--LGLKD-TRETDKLIQGIFHNYPEICDR 558
Query: 550 LRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQ-YHDPVMLKTVKCLDCL 608
N+V S +D + SL+ +H+ I L Y + +
Sbjct: 559 KLNNVPMSLEWFQFYDLVISLV------------LHKQIWSLMPYTNYGFIA-------- 598
Query: 609 GNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDI 668
H Y+ RTQ+M L SY N +K
Sbjct: 599 -----WHLYLARTQKMKL---------------------------SYPTVTNEITQKSAK 626
Query: 669 FKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSA 728
+ + R + T L D L IL+ P LR V HL S+KEK+DLA++++
Sbjct: 627 NTGILTAVRRVCGRDVFT--LTTDIAGFLPDILT-PKLRTVPSHLYSSKEKSDLARIINV 683
Query: 729 MVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLALAVKQV 788
M+ + L++ K+ S + DP I E F + H LA AV+Q+
Sbjct: 684 MLEFGLSFVQEKN-----------SQRGYIYNLDPNILEIGVFLNCNA-HRSLAYAVQQI 731
Query: 789 LVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTNNAAVSAKLIEKSKSL 848
+ E+E +R+ + +I L + ENM AK N + L++
Sbjct: 732 ITQELEVERLKRASILTG--LGEVNSENM------------AKPGNPEIVKNLVQ----- 772
Query: 849 PYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDRFRKLSGKVSQDN 908
N S++ V T S++ +T S+K D FF K Q
Sbjct: 773 ------NISSNVVNNTKQSTKDAT-SLKEIVYKD----------FFGNIITSGNKNGQKQ 815
Query: 909 D---NAVQKATVERDSL--------PLLFKFNEGFTNAVKRPVRMRDFL 946
+ N + + E+ SL + +K+ EG NAV+R V M+ FL
Sbjct: 816 NKTMNRISPKSQEKYSLMKNILTKHGVWYKYKEGCNNAVRRNVSMKKFL 864
>gi|147859649|emb|CAN83115.1| hypothetical protein VITISV_010368 [Vitis vinifera]
Length = 249
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 141/280 (50%), Positives = 176/280 (62%), Gaps = 45/280 (16%)
Query: 7 MHIPLPEELELLEAN---------YQD-----LDPPEQDPDPPEPVPPDSLPLEINGHKR 52
M+IPLPEELE LEAN Y+D P E+ PEP P S P ++NG KR
Sbjct: 1 MYIPLPEELEWLEANSHLHXXLEDYEDQEPPEPYPEEEXEQLPEPPSPLSQP-QVNGQKR 59
Query: 53 PRSDTPKSPIDVDEPQFDEKRSRIVDNDDEDWLRYSPPPPQARDDARVEVEEKFVSRYAS 112
P SD P +P + D + +EDWLRYS P
Sbjct: 60 PLSDGPDAPBSXKRSKADLSET----GAEEDWLRYSLP---------------------Q 94
Query: 113 EIDGDCLPVTAPSGGDRVYVKISSSGVEERVKKLDVRAHSNSLTSEPIDVLLQKVEQEAF 172
+ DGD P+ +R+ IS++G + R+KKLD+ + L EPI VL+Q+VEQ+AF
Sbjct: 95 DSDGDLEPMVVDE--ERI---ISATGSDGRLKKLDLEGRTKGLILEPISVLMQRVEQDAF 149
Query: 173 NKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCV 232
KAL +SSE Q+D LPE VV+EQLWVDKYAP+SFTELLSDEQTNREVLLWLKQWDSCV
Sbjct: 150 TKALZASSELQNDAILPETQVVNEQLWVDKYAPSSFTELLSDEQTNREVLLWLKQWDSCV 209
Query: 233 FGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGN 272
FGSEIR+T+EEVLSALRRHS+I+Q+++ + SF RKN+G
Sbjct: 210 FGSEIRNTTEEVLSALRRHSSIAQHQRPSGMSFLRKNKGQ 249
>gi|424512890|emb|CCO66474.1| chromosome transmission fidelity protein 18 homolog [Bathycoccus
prasinos]
Length = 1030
Score = 223 bits (568), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 219/802 (27%), Positives = 353/802 (44%), Gaps = 153/802 (19%)
Query: 199 WVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNK 258
W+ KYAP FT+L+SDE++NRE+L WLK WD VF + T +++++ HS I
Sbjct: 292 WLTKYAPRKFTDLISDERSNRELLRWLKMWDKIVFN---KKTPDQMMN----HSII---- 340
Query: 259 KQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTR----STGPPEQKVL 314
N + ++N + N+N + +KT ++G P +K+
Sbjct: 341 -----------------NPSVMKASNGQNRNNNYNNNSSKYQQKTEELYDASGRPMKKIA 383
Query: 315 LLCGPPGLGKTTLAHVAAKHCGYHVVEVNA-SDDRSSSTIENKILDVVQMNSVM------ 367
L+ G PG GKTTLAH+AAKH GY VVE+NA S +S++ + + V+M SV+
Sbjct: 384 LVSGGPGSGKTTLAHIAAKHAGYRVVEINAASTQKSTNGLVEAVKQAVEMRSVLESMKGI 443
Query: 368 --------ADSRPKCLVIDEIDGALG--DGKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
++RP CLVIDEID G +GKGA+ +LK+ +
Sbjct: 444 SVSTRSDSQNARPNCLVIDEIDAIFGGNEGKGAMSALLKLANGTL--------------- 488
Query: 418 EKISKKKGCKKAS---LLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHI 474
G KK S L RP+I ICND+Y+ ALR LR +K+ P +RV RL+ I
Sbjct: 489 -------GGKKNSNGPLNRPIILICNDMYSAALRQLRDASKLVRLRPPLAARVTGRLREI 541
Query: 475 CNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGR-KDMSRS 533
+ E + + AL+ LAE E DIR+CLN LQ+ + + D + + G KD+
Sbjct: 542 SSKEKISSDPRALSQLAETCELDIRACLNHLQYKSLARGKFTMAD--APISGESKDVGAK 599
Query: 534 AFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQY 593
A ++ +++++ R + + + S +D L + GD +++ + EN+ +
Sbjct: 600 ALEMMRDVYRGRHAFMEKTYPGPAKHFSWMYDRLETF----GDDNLLLESTFENLPSAKL 655
Query: 594 HDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPL---YVYQPPLAITVHRLVSQIQKPNLE 650
+D M + L ++D+ + I ++ ++ Y Y +A HR ++E
Sbjct: 656 NDSTM-----EMFALASNDISNADIFKSSKLANSTDYFYG-QIASVHHRASGCSTMDSVE 709
Query: 651 WPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISP-LLHILSPPTLRPV 709
+PK R K +I K W K SR +S + + P +L I++P R
Sbjct: 710 FPKIKTAERE-LQRKREITKEWMEK-AKIDSRSISMRNSSSVDVLPYVLTIIAPDVGRAA 767
Query: 710 ALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVST----LSFDPPI 765
+S E L + V S LTY T S + S D ST L P I
Sbjct: 768 GYDFMSQNESEVLKRAVDVTRSAGLTYAKTSS---------KGSFDRSTYSAGLQLQPAI 818
Query: 766 NEFITFKGYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDS 825
+E + + V + K + + + + I + L D
Sbjct: 819 DELVKY-----GCGVPGMVSKPISANGAAIRMSREEWIAQRNALND-------------- 859
Query: 826 KTESAKTNNAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSST--ASVKPKSSGD- 882
E K N KL+++ + P +R+ T+ + +RS P+ G+
Sbjct: 860 --ERDKLRN----EKLVDRRELGPNARELVAREVTMDEIRERARSYNPEGVFTPEKGGER 913
Query: 883 --TKKSFRS-------SSSFFDRFRKLSGK-----VSQDNDNAVQKATVERDSLPLL--- 925
KK F + S+ +D +K S S N + + +T + SL +
Sbjct: 914 GVEKKQFTNQNVVNLPQSAAYDEMKKASNARLELGFSGGNKHRIAASTKPK-SLTTVGVT 972
Query: 926 -FKFNEGFTNAVKRPVRMRDFL 946
+K+NEGFTNA++R V M+D
Sbjct: 973 KYKYNEGFTNALRRTVYMKDLF 994
>gi|443914382|gb|ELU36390.1| sister chromatid cohesion-related protein [Rhizoctonia solani AG-1
IA]
Length = 1446
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 137/412 (33%), Positives = 197/412 (47%), Gaps = 87/412 (21%)
Query: 167 VEQEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLK 226
+EQ + + A + SS+ S +S V+ +WVD+Y P FT+LL DE+ +RE + WLK
Sbjct: 533 MEQLSLSAANDESSQKASGKSGTSDGGVNHSMWVDRYRPKCFTDLLGDERVHRETMAWLK 592
Query: 227 QWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLE 286
+WD CVFG RK R L
Sbjct: 593 EWDQCVFGR-------------------------------RKRR-------------PLR 608
Query: 287 YENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASD 346
E + QD G P +K+LLL GPPGLGKTTLAH+ K GY V E+NASD
Sbjct: 609 QEANEGPQYQDEH-------GRPREKILLLSGPPGLGKTTLAHIVGKQAGYGVAEINASD 661
Query: 347 DRSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNT 406
R+ S ++++I +++ + M ++P +VIDE+DGA GD V + ++
Sbjct: 662 ARTGSIVDDRIRPILESGTAMGSNKPVLMVIDEVDGATGDSVSFVRLGYEL--------- 712
Query: 407 AKENVAKEDQPEKISKKKGCKKAS-LLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVS 465
K KG K + LLRP+ICICNDLYAP+L LR IA+V F +
Sbjct: 713 ------------KARGDKGGKDSRPLLRPIICICNDLYAPSLARLRPIARVIRFRKAQPV 760
Query: 466 RVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVV 525
+ +RL+ IC ES++ + ALT L T+ D+R+C+NTLQ DI
Sbjct: 761 LLTNRLRDICTEESLRADTRALTALVTVTQGDMRACINTLQ-----------NDINRATA 809
Query: 526 GRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNE--FDFLHSLISNRG 575
G K+ S +W ++F T + R +S +S + + L +I N G
Sbjct: 810 GMKETESSVQSVWNDLFTP-VTAKTRKHISGASAMETDKYVSRLSRVIDNAG 860
>gi|312377839|gb|EFR24574.1| hypothetical protein AND_10735 [Anopheles darlingi]
Length = 634
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 141/362 (38%), Positives = 188/362 (51%), Gaps = 54/362 (14%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LWV+KY P + +LLSDE TNR +L WLK WD VF E + E
Sbjct: 313 LWVEKYRPRRYIDLLSDETTNRSLLQWLKLWDKVVFNREPKKPKE--------------T 358
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRST--------GPP 309
K+ N SF +K G F ++ KG +K RST G P
Sbjct: 359 KQLN--SFNKKT-------GRFESTGGW------VKG------RKARSTLNTELDEHGCP 397
Query: 310 EQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM-A 368
QK+ LL GPPGLGKTTLAH A+H GY V EVNASDDRS + QM SV+
Sbjct: 398 VQKIALLSGPPGLGKTTLAHTIARHAGYTVREVNASDDRSPEAFRLALESGTQMKSVLNE 457
Query: 369 DSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKK 428
+ RP C+V+DEIDGA +E +L+ ++ N +++ AK+ K S + K
Sbjct: 458 EKRPNCIVLDEIDGA---PVPTIEFLLRFIAG----NVSQKGPAKKAAGGKSSARD---K 507
Query: 429 ASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALT 488
L RP+ICICND+Y PALR LRQ+A V F +R+ RL I E + T ++
Sbjct: 508 FVLKRPIICICNDMYTPALRQLRQVAFVVNFPPTENARLAERLLAIAKGEHIITDLTSML 567
Query: 489 TLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTK 548
LAE T D+R+CL+ LQF + + + D+ VG+KD + F+IW IFQ R +
Sbjct: 568 ALAEKTGNDVRACLSMLQFYACANKPIRLTDVLKCNVGQKDRKKGLFNIWSSIFQVRTYE 627
Query: 549 RL 550
+L
Sbjct: 628 QL 629
>gi|403215171|emb|CCK69671.1| hypothetical protein KNAG_0C05730 [Kazachstania naganishii CBS
8797]
Length = 821
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 205/753 (27%), Positives = 335/753 (44%), Gaps = 151/753 (20%)
Query: 122 TAPSGGDRVYVK----------ISSSGVEERVKK----------LDVRAHSNSLTSEP-- 159
T P GD ++ ISSSG +K+ L + HS S + +
Sbjct: 80 TQPVAGDETRIQGDNPEEVDRFISSSGAAVALKRKAALNEPAGPLYAQGHSTSTSWKDDD 139
Query: 160 -----IDVLLQKVEQEAFNKALNSS--SEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELL 212
I+ LL K+E +A + E Q D L + ++LWV+K+ P SF +L+
Sbjct: 140 FYGININALLDKIEAQAHDNDATGGDEEEEQGDGGLHKGEPQAQKLWVEKWRPKSFVDLI 199
Query: 213 SDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGN 272
+E+++R +L WL+Q
Sbjct: 200 GNEKSDRILLAWLRQ--------------------------------------------- 214
Query: 273 RWSNGNFRNS--NNLEYENSNSKGIQDSWHKKTRSTGP---PEQKVLLLCGPPGLGKTTL 327
WS F+ N + E+SN K R P P +++LL+ GPPG+GKT++
Sbjct: 215 -WSFAAFKEEPPNPPKAEDSNDD-------KSVRDIDPYQRPYKRILLIHGPPGIGKTSV 266
Query: 328 AHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALGDG 387
AH+ AKH G+ V E+NASD+R+ ++ K+ + + N D RP CLV DEIDG++
Sbjct: 267 AHILAKHAGFAVSEINASDERAGPLVKQKVQNTL-FNHTFND-RPVCLVADEIDGSIE-- 322
Query: 388 KGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPAL 447
G V+V+L ++ + K+ T + KK LLRP++ ICN+LYAPAL
Sbjct: 323 SGFVKVLLDILYQDGKA-TNQARYRNMQSTFSKKKKNKKTSKVLLRPIVAICNNLYAPAL 381
Query: 448 RSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQF 507
LR ++ F +P+ S + RL+HIC +E + S + L + ++ D+R+C+N LQF
Sbjct: 382 EKLRPHCQIISFKRPADSALQERLQHICKSERLLISKKVVNNLIDLSQGDVRNCINNLQF 441
Query: 508 LDKKK----EILNVM------DIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSS 557
L K+K IL+V IGS +KD S S F + +IF+K + +R
Sbjct: 442 LSKQKYSDESILSVKSNEEIEGIGSN---QKDTSMSWFKVVNDIFKKDNNREVREQF--- 495
Query: 558 SNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQY 617
++ L ++ N G+YD I G ++Y D + K D L DLMH+
Sbjct: 496 ------YEVLKNVEMN-GNYDRIVQGCFALYPTVKYSDNGVKKPASITDWLYFQDLMHKS 548
Query: 618 IMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKS------ 671
+ T L Y P + ++ + K+ QR +N E+ +I K
Sbjct: 549 LY-THNGELLRYCPTVPLSFFHHFGDVAN------KTDQRIKNPEYEQREILKQNSDIVS 601
Query: 672 ----WHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVS 727
S + P S L+ ++LV D + L H+LS + +L K+ L+
Sbjct: 602 SIQDGVSSVAPKRSTFLNQKTLVNDILPFLDHMLS--------VDVLKVKDNKMKVLLID 653
Query: 728 AMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNH------YVL 781
M++ ++ + +N + NE++ L+ DPPI++ + F + +VL
Sbjct: 654 RMLAILEAFQLS-----INQMENELTDSRPILTIDPPIDKIVVFDSKKIKEIVTKRPHVL 708
Query: 782 ALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYK 814
L + ++V+K+ I +VT K+ + YK
Sbjct: 709 NLLFAKSEENKVKKRHIDKVTKEKAALEDNKYK 741
>gi|406607430|emb|CCH41221.1| Chromosome transmission fidelity protein 18 [Wickerhamomyces
ciferrii]
Length = 741
Score = 212 bits (540), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 186/666 (27%), Positives = 292/666 (43%), Gaps = 104/666 (15%)
Query: 160 IDVLLQKVEQEAFNKALNSSSEGQSDRSLPEKPVVHEQ---------LWVDKYAPNSFTE 210
ID L Q+ E FN +N + L E P Q LW +K+ P SF +
Sbjct: 110 IDALKQEKENYGFN--INELYGRLEVKRLKEAPSSRNQDSYIPQNNILWAEKWRPKSFFD 167
Query: 211 LLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNR 270
LL +E TNR +L W+K W VF ++ +
Sbjct: 168 LLGNEATNRRILKWIKDWSRVVFDQNLKPITT---------------------------- 199
Query: 271 GNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHV 330
E+SN + K T G P +K+LL+ GPPGLGKTT+AHV
Sbjct: 200 -----------------EDSNPQS------KFTDPFGRPSKKILLIHGPPGLGKTTVAHV 236
Query: 331 AAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALGDGKGA 390
AK GY ++EVNASD+RS + +KI + +NS +P CL+ DE+DGA G
Sbjct: 237 IAKQAGYEIMEVNASDERSGQRVRDKINN--SLNSQTFSGKPVCLIADEVDGAA--EFGF 292
Query: 391 VEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSL 450
V+V+L +++ + ++ +N E KKK K LLRP+I ICNDLYAP+L L
Sbjct: 293 VKVLLDLINEDSRAVYKYQNSESSKFKEDNGKKKKQPKF-LLRPIIAICNDLYAPSLEKL 351
Query: 451 RQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDK 510
R +++ F P+ + RL+ IC +E + ++ L + DIRSCLN LQF
Sbjct: 352 RAQSEIINFKAPTERELRDRLRDICKHEKINITNQQLQEIVLLANYDIRSCLNILQFGGG 411
Query: 511 KKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSL 570
LN S + +KD S F I EIF++R+ K+ + +F L +
Sbjct: 412 ----LN----NSNDLRKKDSQVSWFSIVNEIFRRRRDKK----------KNEQFKELSEI 453
Query: 571 ISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQ 630
I+ YD I +G ++ + Y+D M K D L D+M + L Y
Sbjct: 454 ININPSYDKIINGCFQSYHDVTYNDSQMSKPALISDWLFFGDIMGKTTYEGYG-DLSYYS 512
Query: 631 PPLAITVHRLVSQI-QKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESL 689
+A+ + L + + NL+ Y+ + + ++ + H + + L L
Sbjct: 513 SQVALQFYNLFGDLGNRENLKIKSDYEHFESR-RSNFNLLRQIHGNLNAQLRTLLKPHYL 571
Query: 690 VEDSISPLLHILSPPTLRPVALHLLSAKEKND---LAQLVSAMVSYSLTYKNTKSDPLLN 746
D++ L HI++P L ++ ++ND L Q +A+ + L + K D N
Sbjct: 572 STDALPLLDHIITP------ELKSINNIKENDQLKLRQAANALSGFGLQITDAKDDS-YN 624
Query: 747 NLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGKS 806
++ + FDP K + + L +K++ V + +K+ +V G
Sbjct: 625 DIFTTYPQFHTISKFDP----LTVKKQNQKRTQLFPLMLKELDVMKAKKRAFSKVDQG-- 678
Query: 807 EHLADG 812
E +DG
Sbjct: 679 EGPSDG 684
>gi|353243300|emb|CCA74858.1| related to CTF18-Chromosome Transmission Fidelity factor
[Piriformospora indica DSM 11827]
Length = 836
Score = 211 bits (537), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 177/654 (27%), Positives = 297/654 (45%), Gaps = 83/654 (12%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS 370
+++LLL GPPGLGKTTLAHV A+ GY V+E+NASD RS +TI+ +I V++ + + S
Sbjct: 247 EEILLLSGPPGLGKTTLAHVVARQAGYAVMEINASDARSGATIDERIRPVLEAGTKVGGS 306
Query: 371 RPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI-SKKKGCKKA 429
+P +VIDEIDGA G G + + +++S D+P+K S+ + +
Sbjct: 307 KPVLVVIDEIDGATGGGDNTIGFVQRLLS------------MTIDKPKKTRSRNQKDTRR 354
Query: 430 SLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTT 489
LLRP+ICICNDLYA +L LR ++++ F P+ +V RLK IC E ++ S +LT
Sbjct: 355 PLLRPIICICNDLYAASLAKLRPVSRIVRFQPPAPVHLVKRLKEICEMEDLRADSRSLTA 414
Query: 490 LAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKR 549
L ++ D+R CLNTLQ L K + + +G K+ S D+ +IF R
Sbjct: 415 LVGASQGDMRGCLNTLQLLKAKHSEITEPIVRRATMGMKESEGSFMDVLTDIFTPLSRSR 474
Query: 550 LRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLG 609
+++ +S L+ I + G D + G + L+ P K L L
Sbjct: 475 VKDMGLTSEEEQKYVHRLNRSIESTGAVDKVALG----SVSLR---PDFKAYEKALRWLA 527
Query: 610 NSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPK----SYQRYRNAFMEK 665
D + + ++ + Y I H + P LE PK +YQR +
Sbjct: 528 TYDHFTSGMWQDREYSITPYIGYSLIAFHPTFATKGGPKLERPKADWEAYQRQKTY---- 583
Query: 666 MDIFKSWHSKI--PPYIS---------RHLSTESLVEDSISPLLH-ILSPPTLRPVALHL 713
+++++ + P I RHL ++ +PLL+ I+SPP L+PV +
Sbjct: 584 EEVYRTLQRNVLGEPGIGGASKAAARYRHLVANGTLQLEFAPLLNRIISPP-LKPVNKQV 642
Query: 714 LSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKG 773
+ +E+ ++++V MV+ L + K + DPPI+ F+T+
Sbjct: 643 IKPEERLLMSRVVEIMVTLDLHFIQEKQE-----------DGTLVYRLDPPIDAFVTYDE 691
Query: 774 YRSNHYVLA-LAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESAKT 832
R+ ++ A + ++ E++ Q I E A EE SK++++
Sbjct: 692 KRAADIAVSRYATRHLIAAEIDAQVI----------------ERQAEALEETSKSKASHF 735
Query: 833 NNAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSS 892
+ + + + + S P S+ L +SR + D +S
Sbjct: 736 FGKSATV-VTDDTGSSPVKGSHEREASSPLV---ASRKRKREEQEMDIAD-----KSPVD 786
Query: 893 FFDRFRKLSGKVSQDNDNAVQKATVERDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
FF R + ++ D + V + +K+ EG + AV++PV+M L
Sbjct: 787 FFGRLIAPT-QIQADGSQGL----VPTRPFKVTYKYTEGMSAAVRKPVKMISLL 835
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 59/110 (53%), Gaps = 11/110 (10%)
Query: 135 SSSGVEERVKKLDVRAHSNSLT-SEPIDVLLQKV--------EQEAFNKA--LNSSSEGQ 183
S+ V + LD H S++ SEP D + + V EQ A A L+ SE
Sbjct: 122 SARTVNRLCRSLDSFDHVQSVSISEPKDAISKLVTVQTHKIMEQLAKETAQRLDLESEPT 181
Query: 184 SDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVF 233
+ S + V E LW DKY P FT+LL DE+ +R+ +LW+K+WD+CVF
Sbjct: 182 TSTSKIKSLEVEETLWTDKYRPRHFTDLLGDERVHRDTMLWVKEWDACVF 231
>gi|147781730|emb|CAN69746.1| hypothetical protein VITISV_016319 [Vitis vinifera]
Length = 214
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/138 (73%), Positives = 118/138 (85%)
Query: 175 ALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFG 234
AL +SSE Q+D LPE VV+EQLWVDKYAP+SFTELLSDEQTNREVLLWLKQWDSCVFG
Sbjct: 45 ALQASSELQNDXILPETQVVNEQLWVDKYAPSSFTELLSDEQTNREVLLWLKQWDSCVFG 104
Query: 235 SEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKG 294
SEIRST EEVLSALRRHS+I+Q+++ + SF RKN+G R S+GN R SNNL+ EN N KG
Sbjct: 105 SEIRSTXEEVLSALRRHSSIAQHQRPSGMSFLRKNKGQRLSDGNSRYSNNLDQENGNLKG 164
Query: 295 IQDSWHKKTRSTGPPEQK 312
+Q+ W+KK+R TGPPEQK
Sbjct: 165 LQELWNKKSRGTGPPEQK 182
>gi|10440466|dbj|BAB15766.1| FLJ00069 protein [Homo sapiens]
Length = 579
Score = 203 bits (517), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 131/417 (31%), Positives = 207/417 (49%), Gaps = 25/417 (5%)
Query: 343 NASDDRSSSTIENKILDVVQMNSVM-ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAE 401
+ SDDRS +I QM SV+ A +P CLVIDEIDGA A+ V+L +++ +
Sbjct: 3 HCSDDRSPEVFRTRIEAATQMESVLGAGGKPNCLVIDEIDGA---PVAAINVLLSILNRK 59
Query: 402 RKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQ 461
+ A P +++ + L+RP+ICICND +AP+LR L+Q A + F
Sbjct: 60 GPQEVGPQGPAV---PSGGGRRRRAEGGLLMRPIICICNDQFAPSLRQLKQQAFLLHFPP 116
Query: 462 PSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFL-DKKKEILNVMDI 520
SR+V RL+ + + M+ L L E T+ DIR+C+NTLQFL + + L+V D+
Sbjct: 117 TLPSRLVQRLQEVSLRQGMRADPGVLAALCEKTDNDIRACINTLQFLYSRGQRELSVRDV 176
Query: 521 GSQVVGRKDMSRSAFDIWKEIFQKRKTKRLR----------------NSVSSSSNVSNEF 564
+ VG KD R F +W+E+FQ + +R R S ++ S F
Sbjct: 177 QATRVGLKDQRRGLFSVWQEVFQLPRAQRRRVGQDPALPADTLLLGDGDAGSLTSASQRF 236
Query: 565 DFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQM 624
+ ++ G+++ + G+ +N L+L+ D + LD L DL+ +Q
Sbjct: 237 YRVLHAAASAGEHEKVVQGLFDNFLRLRLRDSSLGAVCVALDWLAFDDLLAGAAHHSQSF 296
Query: 625 PLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHL 684
L Y P L + H L + P + +P S Q +N + ++ ++ S I P +R
Sbjct: 297 QLLRYPPFLPVAFHVLFASSHTPRITFPSSQQEAQNRMSQMRNLIQTLVSGIAP-ATRSR 355
Query: 685 STESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKS 741
+T + LL + P LRPV+ L S +EK LA LV M++YSLTY+ ++
Sbjct: 356 ATPQALLLDALCLLLDILAPKLRPVSTQLYSTREKQQLASLVGTMLAYSLTYRQERT 412
>gi|403375550|gb|EJY87752.1| ATPase involved in DNA replication [Oxytricha trifallax]
Length = 929
Score = 202 bits (514), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 199/729 (27%), Positives = 301/729 (41%), Gaps = 160/729 (21%)
Query: 197 QLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSE--------IRSTSEEVLSAL 248
QLW+DKY F ELL+DE TNR VL W+K WD V+ + + V S L
Sbjct: 184 QLWIDKYTSQKFFELLTDEATNRNVLTWIKTWDEVVYPEAPIVNLKVPLSMQKQYVHSGL 243
Query: 249 RRHSTISQNK-----KQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKT 303
+ + + Q Q+ F+ KN+ K
Sbjct: 244 QAVNGVPQRAPTHHFVQHQDQFSFKNK------------------------------KVL 273
Query: 304 RSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQM 363
GPP G GK+T+A V AKHCGY++ EVNASD+R+ + KI QM
Sbjct: 274 LLYGPP-----------GTGKSTMARVLAKHCGYNITEVNASDERTGDRLLEKIKSATQM 322
Query: 364 NSVMADS--------------RPKCLVIDEIDGALGDGKGAVE---VILKMVSAERKSNT 406
NS + + +P CL++DE+DGA+G G G+++ + K+V +K
Sbjct: 323 NSHFSKAAPSPVNGGNQDDKQKPVCLIVDEVDGAVGSG-GSLDGQKGVGKIVEYLKKCIN 381
Query: 407 AKENVAKE--------------------DQPEKISKKKGCKKA--------SLLRPVICI 438
EN+AK+ DQ E SK L RP+I I
Sbjct: 382 YSENLAKKRNQADEDDEGDEDMKDQDDNDQEEGASKIAKKAGKKKKDDGIRELKRPIIFI 441
Query: 439 CNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDI 498
CNDLY+ AL LR IA + + R++ RL+ IC E+ K L L E T D
Sbjct: 442 CNDLYSKALMPLRDIALCVKIEESNYERLLQRLRFICKKENFKVDDQILRELCEETRFDA 501
Query: 499 RSCLNTLQFL------DKKKEILN--VMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRL 550
RSC+NTLQF+ + +K +N V G G KD + F+I E+ +
Sbjct: 502 RSCINTLQFMAAQQRENGEKITVNQAVETCGKMTYG-KDNFDNVFNIADELLFCKDRHIY 560
Query: 551 RNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENI-LQLQYHDPVMLKTVKCLDCLG 609
N+V V + L GD ++ D + N + Y D + KT LD +
Sbjct: 561 TNNVKLLKEVRQKVQVL-------GDSQLLNDYLFHNYSSSVGYFDDDLEKTAYFLDTMS 613
Query: 610 NSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSY-------QRYRNAF 662
++L +I RTQ + Q A T + + ++ E+PK Q+Y++ F
Sbjct: 614 RAELNQSFIGRTQNYEMLSTQYIPAYTFRKFCAGVRISKNEFPKEVRNFRFERQKYKDTF 673
Query: 663 MEKMDI--FKSWHSKIPPYISRHLSTESLVE-----------------DSISPLLHILSP 703
+ +D+ KS ++ E + I P ++ +
Sbjct: 674 DKLLDLSGGKSQRKGFRKLKENDVNNEERFKLDKNTSLQTGIRKRDFNTDILPFIYHMVH 733
Query: 704 PTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDP 763
P +R + L + E+ Q + M+ + +T K D LL +L N ++ F+P
Sbjct: 734 PNIREINTQLFTKHERIAFQQAIEIMIMFDITLKPESQDSLL-DLSN---YNADIAQFEP 789
Query: 764 PINEFITFKGYRSNHYVLALAVKQVLV---HEVEKQRIMQVTIGKSEHLADGYKENMDL- 819
+ +TFKG H Q+LV +E KQR++ + G+ L D Y E + L
Sbjct: 790 DLTSLVTFKG---GHKQYMRNKTQILVLQNYESIKQRMLTSSNGQ---LGD-YFETLKLK 842
Query: 820 --AGEEDSK 826
A ED+K
Sbjct: 843 KSAAIEDTK 851
>gi|219118332|ref|XP_002179943.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408996|gb|EEC48929.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1015
Score = 201 bits (512), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 211/804 (26%), Positives = 339/804 (42%), Gaps = 142/804 (17%)
Query: 197 QLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQ 256
+LWVDK+AP SF LLSDE+TNREV+ L+ WD VF + + SA
Sbjct: 298 RLWVDKHAPTSFAHLLSDERTNREVVRALRAWDPYVFRRDPPPRPDFGYSA--------- 348
Query: 257 NKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQ--KVL 314
K +D RKN E+ + S+ DS + R PE+ +V+
Sbjct: 349 --KPSDFHSDRKN----------------EHGSGKSR---DSSRQDRR----PEESCRVI 383
Query: 315 LLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA------ 368
LL GPPG+GKTTLAH+ A+H GY +EVN SD+RS+S + +I+ ++ ++
Sbjct: 384 LLSGPPGVGKTTLAHIVARHAGYRPLEVNGSDERSASALTERIVRAMESTTLHTAKMRRS 443
Query: 369 --------DSRPK--CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPE 418
DS PK C+++DEIDGA D KG+++ I+ N+ + D P
Sbjct: 444 VHNHECKDDSLPKPNCVILDEIDGA--DAKGSIQAIV--------------NIIRADIP- 486
Query: 419 KISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNE 478
+K + K L RP+I ICN+ YAP LR+L AK PS +R+V+RL+ + E
Sbjct: 487 --AKSQASKAQYLRRPLILICNNKYAPTLRALLPYAKAFHVNPPSPARLVARLRSVLTAE 544
Query: 479 SMKT--SSIALTTLAEYTECDIRSCLNTLQFLDKK--------KEILNVMDIGSQVVGR- 527
++ S L L DIRSCL+TLQF + +E +V+D+ + G
Sbjct: 545 NLTAGGGSSLLNQLVSVASGDIRSCLHTLQFASSRSKELATHAEEAPSVIDLSDSLRGAM 604
Query: 528 -----KDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFD 582
KD +F+KRK + +S + + + N GD I D
Sbjct: 605 SGDGLKDERNDMAGTITSVFRKRKDRTFLDSKRVMQDKRPSSTRIFEAVQNFGDNLRILD 664
Query: 583 GIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVS 642
+ N+L++ Y DP + + + L +SDL + + P A +H L
Sbjct: 665 VLFLNVLRVSYIDPTLDRCAAAHEWLSSSDLCPRQV------------PSTAGAIHLLCR 712
Query: 643 QIQKPNLEW-PKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHIL 701
Q+P+L + + R F + + + + +R ST L ++I L +L
Sbjct: 713 VEQRPDLSFSTRELMDSRYQFEANQSLAQKFAEGL-SMQTRSRSTSLLATETIPYSLWVL 771
Query: 702 SPPTLRPVA-------LHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSH 754
S A L +L+ E + V ++ L+Y + +
Sbjct: 772 SAGEGSSGALDRAATSLQILNKAELGSFHRHVMSLRCLGLSYVAEQEEAAPGEFKGITG- 830
Query: 755 DVSTLSFDPPINEFITFKGYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADG-Y 813
S L +PPI+ F + + + Q+ +++ I E LA
Sbjct: 831 --SVLRLEPPIDRLAHF----------------MDLTRAKSQKRIEIPIAMKELLAQSVL 872
Query: 814 KENM-DLAGEEDSKTESAKTNNA----AVSAKLIEKSKSLPYSRQCNPSTSTVLTTLD-- 866
ENM L + SK S K + +V A +E + L +P ++ D
Sbjct: 873 HENMRHLGAQAQSKAISTKVRSKLPAPSVVAAPMEAAPELSAMNTSSPDKREAASSSDAP 932
Query: 867 -SSRSSTASVKPKSSGDTKKSFRSSSSFFDRFRKLSGKVSQDNDNAVQKATVERDSLPLL 925
+ R T S K++ ++ R + + +V + + Q + +PL
Sbjct: 933 LAKRRKTPS-PTKATAHNFLGLQARKVKQQRSARTAARVGVERSHKHQTSHTG-SGVPLT 990
Query: 926 ----FKFNEGFTNAVKRPVRMRDF 945
++ +GFT AV+ P R+ D
Sbjct: 991 QIVRLRYIKGFTQAVRAPCRLEDL 1014
>gi|170071240|ref|XP_001869850.1| chromosome transmission fidelity protein 18 [Culex
quinquefasciatus]
gi|167867164|gb|EDS30547.1| chromosome transmission fidelity protein 18 [Culex
quinquefasciatus]
Length = 575
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 129/326 (39%), Positives = 162/326 (49%), Gaps = 65/326 (19%)
Query: 189 PEKPVV-----HEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEE 243
PE PVV LWV+KY P + +LLSDE TNR +L WLK WD VF E + T +
Sbjct: 284 PEAPVVVVPDHGSVLWVEKYRPKRYIDLLSDETTNRSLLQWLKLWDKVVFNREPKQTKD- 342
Query: 244 VLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKT 303
K+ N SF +K R+ +G W KK
Sbjct: 343 -------------TKQIN--SFNKKT--GRFESGG--------------------WKKKG 365
Query: 304 RST--------GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIEN 355
RST G P QK+ LLCGPPGLGKTTLAH A+H GY V EVNASDDRS
Sbjct: 366 RSTLNTELDEHGRPAQKIALLCGPPGLGKTTLAHTIARHAGYVVREVNASDDRSPEAFRV 425
Query: 356 KILDVVQMNSVM-ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKE 414
+ QM SV+ D RP C+V+DEIDGA +E +L+ V+ AK
Sbjct: 426 ALEGGTQMKSVLNQDGRPNCIVLDEIDGA---PVATIEFLLRFVTGAVPVKGAK------ 476
Query: 415 DQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHI 474
K +K + K L RP+ICICND+Y PALR LRQ+A V F +R+ RL I
Sbjct: 477 ----KSAKGEKADKFILKRPIICICNDMYVPALRQLRQMAFVVNFPPTESARLAERLLLI 532
Query: 475 CNNESMKTSSIALTTLAEYTECDIRS 500
E + T ++ LA+ T D+R+
Sbjct: 533 AKQEKILTDLTSMLALADKTGNDVRA 558
>gi|147818749|emb|CAN76175.1| hypothetical protein VITISV_022747 [Vitis vinifera]
Length = 195
Score = 199 bits (507), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 99/138 (71%), Positives = 117/138 (84%)
Query: 175 ALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFG 234
AL +SSE Q+D LPE VV+EQLWVDKYAP+SFTELLSDEQ NREVLLWLKQ DSCVFG
Sbjct: 26 ALQASSELQNDAILPETQVVNEQLWVDKYAPSSFTELLSDEQXNREVLLWLKQXDSCVFG 85
Query: 235 SEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKG 294
SEIRST+EEVLSALRRHS+I+Q+++ + SF RKN+G R S+GN R SNNL+ EN N KG
Sbjct: 86 SEIRSTTEEVLSALRRHSSIAQHQRPSGMSFLRKNKGQRLSDGNSRYSNNLDQENGNLKG 145
Query: 295 IQDSWHKKTRSTGPPEQK 312
+Q+ W+KK+R TGPPEQK
Sbjct: 146 LQELWNKKSRGTGPPEQK 163
>gi|224001338|ref|XP_002290341.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973763|gb|EED92093.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 1157
Score = 197 bits (502), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 213/826 (25%), Positives = 350/826 (42%), Gaps = 133/826 (16%)
Query: 194 VHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHST 253
+ ++LWVDK+AP S + LLSDE+TNREVL L+ WD VF + R T
Sbjct: 392 LKQRLWVDKHAPTSISHLLSDERTNREVLRALRLWDPYVFKRK---------PPARPTPT 442
Query: 254 ISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQ-K 312
++ N++ N G R + + + +G ++ R P E +
Sbjct: 443 YPNYRRDNNN-----NGGGREQGKKGKWDKKKREGDEDGEGKAENQKVDVR---PDESSR 494
Query: 313 VLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV-MAD-- 369
VLLL GPPG+GK+TLAH+ KH GY +EVNASD+RS+S + ++ ++ +++ + D
Sbjct: 495 VLLLSGPPGVGKSTLAHIVCKHAGYRPIEVNASDERSASALTERVTRAMESSTLNLGDDD 554
Query: 370 -------SRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISK 422
+P C+++DE+DGA D K ++ ++ ++ A+ T + + K
Sbjct: 555 ERGYGKAGKPNCIILDEVDGA--DAKSSIAALVDIIRADIPPTTKGGSSKGKKGGRK--- 609
Query: 423 KKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMK- 481
L RP+I ICN +APALR + A+ P+ R+ RL+ + E M
Sbjct: 610 -----TTYLRRPIILICNHKHAPALRPILPYARQFDVQPPNPERLTGRLRAVLAAEHMSV 664
Query: 482 -TSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNV-------------------MDIG 521
+ L L T D+RSCL LQF + L V +DI
Sbjct: 665 IAGGMLLHRLVAATGGDVRSCLYALQFASARARELAVKKRGSENGGAPIGKGGTLMVDIS 724
Query: 522 SQVV--------GRKDMSRSAFDIWKEIFQKRKT----KRLRNSVSSSSNVSN--EFDFL 567
S ++ G KDM +F+K K KRL+ S +S + D +
Sbjct: 725 STLMAALGDTGNGMKDMQSDVSSTVATVFRKEKARSQNKRLKTSGVASGAIPTPKGVDVV 784
Query: 568 HSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLY 627
+ + GD D + N+ ++ Y DP + + + L +D I R+Q+ +
Sbjct: 785 LKAVDHFGDNSKTLDCLFMNVNRVSYVDPTLDRCAVAFEWLSGAD-----IYRSQKSNVA 839
Query: 628 V------------YQPPLAITVHRLVSQIQKPNLEW---PKSYQRYRNAFMEKMDIFKSW 672
+ Y P A +H L +P+L + P + Y+N E + +
Sbjct: 840 MNNSAEHHAMQKFYIPSAAAAIHLLCCVETRPDLTFSTRPLADLHYQNQANESL--VHRF 897
Query: 673 HSKIPPYISRHLS--TESLVEDSISPLLHILSP-----PTLRPVA-LHLLSAKEKNDLAQ 724
+ P R + T+ +V D I L +LS RPV+ + +LS++EK +
Sbjct: 898 VEGLAPKARRGVGGGTDIVVSDVIPYGLWLLSAGDGKNALSRPVSSIDILSSEEKLAFSA 957
Query: 725 LVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFK----GYRSNHYV 780
V+ + + LTY K D NN S +P I++ + F GY
Sbjct: 958 HVATLRTLGLTY--VKEDGGFNNFKFN-SAPAENFRLEPEIDKLVKFDDISDGYSVERKH 1014
Query: 781 LALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTNNAAVSAK 840
+ +K++L H + + K L + EN E + A
Sbjct: 1015 VPPMMKELLAHGATVAALRERESEKKAAL-EAISENAVAMDTEKPPPQDA---------- 1063
Query: 841 LIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDRFRKL 900
L +K + P S P T S+ + V+ + + K + R++ FDR +K+
Sbjct: 1064 LAKKQLTPPKSVSSKPEKHKANT---SAAKNFLGVRASKAKEAKTARRAARVGFDRTKKV 1120
Query: 901 SGKVSQDNDNAVQKATVERDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
K+S + + V+ V R FK+ +GFT AV+ P +M D +
Sbjct: 1121 --KLS-NTGSGVELTKVIR------FKYQKGFTQAVRAPCQMEDLV 1157
>gi|255713390|ref|XP_002552977.1| KLTH0D05852p [Lachancea thermotolerans]
gi|238934357|emb|CAR22539.1| KLTH0D05852p [Lachancea thermotolerans CBS 6340]
Length = 702
Score = 196 bits (497), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 155/582 (26%), Positives = 272/582 (46%), Gaps = 81/582 (13%)
Query: 160 IDVLLQKVEQEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNR 219
I+ LLQ+ E + N A+ SS +S S QLW +K+ P++F +L+ +E+TNR
Sbjct: 58 INQLLQRCEDSS-NAAIQSSGASRSKHS-------PSQLWTEKWKPHTFFDLVGNEKTNR 109
Query: 220 EVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNF 279
VL WL+QW VFG E+ + V R G +N +F
Sbjct: 110 RVLKWLRQWSPLVFGQELPKKAPSV----------------------RDKVGADGANYDF 147
Query: 280 RNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHV 339
D + P++++LLL GPPG+GKT++AHV AK G+ V
Sbjct: 148 ----------------DDPLQR-------PQKRILLLNGPPGIGKTSVAHVVAKQAGFSV 184
Query: 340 VEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVS 399
+E+NASD+R+ ++++I + + ++ D RP CL+ DEIDG++ G V+V++ +V+
Sbjct: 185 IEINASDERAGPHVKDRIHNALFNHTF--DDRPVCLIADEIDGSIE--TGFVKVLIDIVN 240
Query: 400 AERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVF 459
++ ++ T + ++ +K+ L RP+I ICN++YA AL LR ++ F
Sbjct: 241 SDYRA-TQRLASGASSAVQRGKRKQRSPGKVLTRPIITICNNVYASALEKLRPHCEIVTF 299
Query: 460 IQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFL----DKKKEIL 515
+P+ S ++ RL H+C E ++ L L+E ++ D+RSCLN +QF+ + E
Sbjct: 300 RRPAESALLERLSHVCRKEKLQLDKKRLKELSELSQGDLRSCLNNMQFMASLHAEAPEST 359
Query: 516 NVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRG 575
+ I Q+ KDM+ S + I ++F++ + + +F L I
Sbjct: 360 DTAKISDQI---KDMTVSWYKICNQVFRR----------NPHEDAKVQFGRLLRDIEINS 406
Query: 576 DYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAI 635
+ I G ++++ D + K D L +DLM + + L Y + +
Sbjct: 407 NSQRIVQGCFSMFPEVKFSDHSLQKPSAAADWLYFNDLMFKSLFE-HNGDLLRYNSVVPM 465
Query: 636 TVHRLVSQI-QKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSI 694
L S I K ++ + +R I S + PP + ++ SL + +
Sbjct: 466 AFFHLFSDIANKDDVRGKVNEFDHREDLRNNESIVLSTFRRAPPTLKIFMNKSSLALE-V 524
Query: 695 SPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTY 736
PLL + P + + + L+ +V+A+ S+ LT+
Sbjct: 525 LPLLDYIIVPDFSKIRNN---QTKTTVLSNIVAALSSFDLTF 563
>gi|321473706|gb|EFX84673.1| hypothetical protein DAPPUDRAFT_301124 [Daphnia pulex]
Length = 559
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 170/628 (27%), Positives = 282/628 (44%), Gaps = 92/628 (14%)
Query: 342 VNASDDRSSSTIENKILDVVQMNSVM-ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSA 400
+NASDDR+ + +I QM SVM A+ P CL+IDEIDGA ++ ++ ++
Sbjct: 1 MNASDDRNVEAFKLQIEAATQMRSVMGANPLPNCLIIDEIDGA---PAASINFLVNTLTQ 57
Query: 401 ERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFI 460
+ N KEN Q K KKKG S RPVICICNDLY P+LR LRQ A V F
Sbjct: 58 DSGQN--KEN----SQATKKKKKKGINIVS--RPVICICNDLYTPSLRPLRQAALVLQFP 109
Query: 461 QPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDI 520
+ +R+ RL I ++ + L E + DIRSCL TL FL ++ L D+
Sbjct: 110 PTNPNRLAQRLLSISKEHDIQVDMTTMLALCEKADYDIRSCLATLYFLKSRRRPLRYSDV 169
Query: 521 GSQVVGRKDMSRSAFDIWKEIF----QKRKTKRLRN----------------SVSSSSNV 560
+ +G KD +S F +W+EIF QKR + N + ++ +N
Sbjct: 170 MNLNIGHKDNHKSLFQVWQEIFHIPRQKRNQYMVENEREGMLPLAPDVDRPLAPNAGNNA 229
Query: 561 SNEFDFLHSL--ISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYI 618
S F + L + + G+YD + G+ EN +++ D + LD + D ++ +I
Sbjct: 230 SMPARFANILHAVHSCGEYDRLMQGVFENYPTIKFKDSYLNAVCIGLDWMCFFDHVNHFI 289
Query: 619 MRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPP 678
Q ++ Y P I +H ++ + +++P + R + +I + + P
Sbjct: 290 QLNQNYCVFGYLPYAFIALHFQMAAVLSQKIQYPTAQTELRAKQGKNENIVSAMLQDLKP 349
Query: 679 YISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKN 738
+ + + +++D I L I++ P+LRPV+ L SA+EK + +++ M+SY+LT++
Sbjct: 350 TVRITNNKDIIIQDIIPFSLPIIT-PSLRPVSAQLYSAEEKEQILRVIGVMISYNLTFRQ 408
Query: 739 TKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLALAVKQVLVHEVEKQRI 798
K+ V +P + + F+ + L +VKQ+L E+E +++
Sbjct: 409 EKT-----------IDGVYRYCLEPDVEQVAYFEVDNAQRKSLTYSVKQMLAREIELEKL 457
Query: 799 MQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTNNAAVSAKLIEKSKSLPYSRQCNPST 858
Q + K ++ EE + NAA++ L K P C P+T
Sbjct: 458 RQYECNLGPMITP--KATIEEIEEEPKVIKPPP--NAAMTLAL----KPKPIVESCKPAT 509
Query: 859 STVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDRFRKLSGKVSQDNDNAVQKATVE 918
FF R K K + ++VQ A +
Sbjct: 510 ---------------------------------DFFGRPLKTPPKKKNADGSSVQIAQND 536
Query: 919 RDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
+ + F EG++NAV+R V++ DF+
Sbjct: 537 -----VWYHFKEGYSNAVRRSVKIADFI 559
>gi|358340408|dbj|GAA33934.2| chromosome transmission fidelity protein 18 [Clonorchis sinensis]
Length = 1146
Score = 192 bits (489), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 182/685 (26%), Positives = 283/685 (41%), Gaps = 142/685 (20%)
Query: 202 KYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQN 261
K+ P E TNR +L WLK WD VFG+E + +
Sbjct: 463 KFQPVGLVEEAERLTTNRTLLRWLKAWDPYVFGAE----------------HVPAKTQST 506
Query: 262 DSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPG 321
++ + G G F S+ + G D G P +V+LL G PG
Sbjct: 507 TTASSAATPG-----GPFAASSRAWVDLERMAGEIDP------RDGLPRYRVVLLAGCPG 555
Query: 322 LGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVV----QMNSVMADS------R 371
LGKTTLAH+ A+H GY V+E+NASDDR+ S ++++ +V +N+ D +
Sbjct: 556 LGKTTLAHLLAQHAGYQVIEMNASDDRTVSVFKDQLTAIVSTSTSLNTTAPDGSGTGCYK 615
Query: 372 PKCLVIDEIDGALGDG----KGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCK 427
P CL++DEIDGA+ A +L V AER++ K+
Sbjct: 616 PCCLILDEIDGAVPAAVELLATAARAVLPPVGAERRAR----------------GKRNTT 659
Query: 428 KASLLRPVICICNDLYAPALRSLRQIAKVHVFIQ-PSV--SRVVSRLKHICNNESMKTSS 484
L RPVICICNDL++PA+R LR + I+ P+V R+++RL+ IC E +
Sbjct: 660 PLVLRRPVICICNDLFSPAVRPLRAPGVPCLVIRLPNVDLGRLITRLETICQKEGLMVEK 719
Query: 485 IALTTLAEYTECDIRSCLNTLQFL---------DKKKEILNVMDIGSQV---VGRKDMSR 532
+ LT LAE E DIR+CLN LQFL +K L+ D+ + + G KD+ R
Sbjct: 720 MLLTQLAEIAERDIRACLNALQFLRAHLGSEFGNKANRNLSTEDLCTLIGFGGGFKDVQR 779
Query: 533 SAFDIWKEIF-----------------------------QKRKTKRLRNSVSSSSNVSNE 563
S FD+WK +F ++ + R S S + ++
Sbjct: 780 SLFDVWKAVFTIPSARLLASRIESRSRILSGSYPHHNVVSTQQQPKTRASYDSETTIAAR 839
Query: 564 FDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQ 623
+ ++ + GD +I GI EN L + D + + + D + +I+
Sbjct: 840 IQHVCEVVDSAGDAPLIAMGIFENYLNSRMKDASLNVARQAANWFVFHDQLFTHILSRAD 899
Query: 624 MPLYVYQPPLAITVH-------RLVSQI----QKPNLEWPKSYQRYRNAFMEKMDIFKSW 672
L Y L +H L SQ+ + L WP ++ + + I
Sbjct: 900 YSLMRYITWLPAWIHLALATPTGLPSQLNVGTKSGGLRWPTAHTEANTTQTQCIAILDQL 959
Query: 673 HSK---IPPYISR-----HLSTESLVEDSISPLLHILSPPTL----------RPVALHLL 714
H+ +P + H +T S L ++P + RP+ L
Sbjct: 960 HANQWSLPSSSEKSGSADHSATSSFRFTPRRVFLLDVAPLAVSLLSLSSSSLRPLNSQLY 1019
Query: 715 SAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFIT-FKG 773
S +EK+ L +V M+S L + P N+ EV + P +FIT F G
Sbjct: 1020 SQQEKSTLKSIVEIMLSLGLDW-----SPQQNSETGEVEFQLE------PTLDFITGFSG 1068
Query: 774 YRSNHYVLALAVKQVLVHEVEKQRI 798
+ +A KQ++ E+ +R+
Sbjct: 1069 LSNGLRSIAHMTKQLIARELGVERL 1093
>gi|119606116|gb|EAW85710.1| CTF18, chromosome transmission fidelity factor 18 homolog (S.
cerevisiae), isoform CRA_g [Homo sapiens]
Length = 557
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 124/397 (31%), Positives = 198/397 (49%), Gaps = 25/397 (6%)
Query: 363 MNSVM-ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKIS 421
M SV+ A +P CLVIDEIDGA A+ V+L +++ + + A P
Sbjct: 1 MESVLGAGGKPNCLVIDEIDGA---PVAAINVLLSILNRKGPQEVGPQGPAV---PSGGG 54
Query: 422 KKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMK 481
+++ + L+RP+ICICND +AP+LR L+Q A + F SR+V RL+ + + M+
Sbjct: 55 RRRRAEGGLLMRPIICICNDQFAPSLRQLKQQAFLLHFPPTLPSRLVQRLQEVSLRQGMR 114
Query: 482 TSSIALTTLAEYTECDIRSCLNTLQFL-DKKKEILNVMDIGSQVVGRKDMSRSAFDIWKE 540
L L E T+ DIR+C+NTLQFL + + L+V D+ + VG KD R F +W+E
Sbjct: 115 ADPGVLAALCEKTDNDIRACINTLQFLYSRGQRELSVRDVQATRVGLKDQRRGLFSVWQE 174
Query: 541 IFQKRKTKRLR----------------NSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGI 584
+FQ + +R R S ++ S F + ++ G+++ + G+
Sbjct: 175 VFQLPRAQRRRVGQDPALPADTLLLGDGDAGSLTSASQRFYRVLHAAASAGEHEKVVQGL 234
Query: 585 HENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQI 644
+N L+L+ D + LD L DL+ +Q L Y P L + H L +
Sbjct: 235 FDNFLRLRLRDSSLGAVCVALDWLAFDDLLAGAAHHSQSFQLLRYPPFLPVAFHVLFASS 294
Query: 645 QKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPP 704
P + +P S Q +N + ++ ++ S I P +R +T + LL + P
Sbjct: 295 HTPRITFPSSQQEAQNRMSQMRNLIQTLVSGIAP-ATRSRATPQALLLDALCLLLDILAP 353
Query: 705 TLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKS 741
LRPV+ L S +EK LA LV M++YSLTY+ ++
Sbjct: 354 KLRPVSTQLYSTREKQQLASLVGTMLAYSLTYRQERT 390
>gi|299753266|ref|XP_001833167.2| CHTF18 protein [Coprinopsis cinerea okayama7#130]
gi|298410221|gb|EAU88856.2| CHTF18 protein [Coprinopsis cinerea okayama7#130]
Length = 940
Score = 189 bits (481), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 196/779 (25%), Positives = 321/779 (41%), Gaps = 197/779 (25%)
Query: 190 EKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALR 249
+KP V + LWVD+Y P FT+LL +E+ +RE + WLKQWD CVFG
Sbjct: 211 DKPDVEDTLWVDRYRPRKFTDLLGNERASREAMAWLKQWDWCVFGK-------------- 256
Query: 250 RHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPP 309
+ + +Q D T YE D +H+ P
Sbjct: 257 --NKAKKRARQKDEDTT--------------------YE--------DEYHR-------P 279
Query: 310 EQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMAD 369
++K LLL GPPGLGKTTLAHV AK G D RS + ++++I ++ S +
Sbjct: 280 QEKFLLLSGPPGLGKTTLAHVIAKQAG---------DARSGNVVDDRIRPTLEAGSTVGS 330
Query: 370 SRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKA 429
++P +VIDEIDGA G G SNT+ +AK
Sbjct: 331 TKPVLVVIDEIDGATGAGD--------------NSNTS---IAK---------------- 357
Query: 430 SLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTT 489
LRP +A +R F +PS V RL+ IC E +K + AL T
Sbjct: 358 --LRP--------HALQIR----------FNKPSDIHTVKRLREICEYEGLKADARALAT 397
Query: 490 LAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKR 549
L + D+R CLNTLQF+ KKE + I +G K+ S +F KR
Sbjct: 398 LVGVAKGDLRGCLNTLQFIKSKKEDVTEPIIRKATMGMKESGSSIQSCLNSLFTPLSKKR 457
Query: 550 LRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLG 609
++ + S L+ I + G F + L++HD + + + ++ L
Sbjct: 458 VKELGLTESEERKYVGRLYHEIDSCGRETACFG----HYTTLRHHDANLSRHERAIEWLV 513
Query: 610 NSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQ-----IQKPNLEWPKSYQRYRNAFME 664
D M + L+ Y P + L + I + ++W +
Sbjct: 514 TFDTMSSAMYGDGDFTLHHYLPYTLVPFFPLFKERGGERIDRRQVDW-----EHVQLLRT 568
Query: 665 KMDIFKSWHSKIPPYI------SRHLSTESLVEDSISPLLH-ILSPPTLRPVALHLLSAK 717
+I+K+ + RH S +++ +PL++ I+SPP LRP+ ++ +
Sbjct: 569 NEEIYKTLGRSLRSAAVRNNGDYRHFSETPILQTEFAPLINRIISPP-LRPINNQVIKVE 627
Query: 718 EKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSN 777
E+ L +LVS MV+ L + +S+ ++S+ +PPI+ FIT+ G R+
Sbjct: 628 ERALLQRLVSVMVAIDLRFVRERSE------DGQLSY-----RLEPPIDVFITYDGKRAA 676
Query: 778 HYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYK-ENMDLAGEEDSKTESAKTNNAA 836
++ + + H V +Q ++T +E++ G + ++ DL K+ S N +
Sbjct: 677 DIPVS---RYAVRHLVAEQVDAKLTERDTEYIEKGKRGKHADLF-----KSSSGSLNRS- 727
Query: 837 VSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKS-FRSSSSFFD 895
P+ R + +V + D K+S + FF
Sbjct: 728 ------------PHKRPRD------------------TVDGEDVPDAKRSKLEGPTDFFG 757
Query: 896 RFRKLSGKVSQDNDNAVQKATVERDSLPLLFKFNEGFTNAVKRP-------VRMRDFLL 947
R+++ + +K +VE+ + ++F EG + AV+RP + MR FL+
Sbjct: 758 --RRITAPAGKGPRFTTRKVSVEK-PYKVTYRFAEGNSAAVRRPCNVVLSRISMRVFLV 813
>gi|213406089|ref|XP_002173816.1| chromosome transmission fidelity protein [Schizosaccharomyces
japonicus yFS275]
gi|212001863|gb|EEB07523.1| chromosome transmission fidelity protein [Schizosaccharomyces
japonicus yFS275]
Length = 825
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 138/468 (29%), Positives = 228/468 (48%), Gaps = 33/468 (7%)
Query: 307 GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV 366
G PE++VLLL GPPG GKTTLAHV A+ GY+VVEVNASDDR+++T++ KI + + ++
Sbjct: 277 GRPEKRVLLLTGPPGSGKTTLAHVIARQAGYNVVEVNASDDRTANTVKQKIAEAINTHTA 336
Query: 367 MADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGC 426
+ SRP C+V DEIDG GD G + ++ + ++ +A N K +K+
Sbjct: 337 FS-SRPTCIVADEIDG--GD-PGFARALADLLIGDERATSAITNSQK--------RKRNT 384
Query: 427 KKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIA 486
+ +LRP+ICICND++ P+LR+LR A++ F + +V RL+ +C + + S +
Sbjct: 385 NRKLILRPIICICNDVFTPSLRTLRPYARIVYFKPAPQAALVGRLRTVCRLQGLNADSRS 444
Query: 487 LTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVV--GRKDMSRSAFDIWKEIFQK 544
LT L + + DIRS LN LQ L + + ++ + + D+S A + +IF+
Sbjct: 445 LTVLTDLCKFDIRSSLNALQMLSRHSDSISEQTMKQLMFPDSGNDLSNHAVGLLTKIFRL 504
Query: 545 RKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKC 604
++K LR S + ++ L+SL S D + + L L + D + K +
Sbjct: 505 PQSKELRFLKSVTPQYTHFSSLLNSLES-VDDNNSTLMHCFQTFLTLSFADHLFTKVISS 563
Query: 605 LDCLGNSD--LMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNL-EWPKSYQRYRNA 661
D L D L QY + L Y + H+ + + P + P+
Sbjct: 564 GDWLYFMDRILTLQYQGHAE---LLRYFASSLLHFHQHYATVDCPRFTKLPRDDLEMMKN 620
Query: 662 FMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKND 721
+ +I + ++I P +SR + + + V P L L P ++ V+ L++ ++
Sbjct: 621 RKSRSEILDDFFNRI-PLVSRQMYSRTTVLLDAIPFLVNLVNPDIKAVSKTLVNPNDEKA 679
Query: 722 LAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFI 769
L V MV L Y+ S S DPPI++ +
Sbjct: 680 LQHTVDLMVYSHLNYEQLPS-----------SEGGFIYRLDPPIDDLL 716
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 27/37 (72%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFG 234
LW DKY P F +L+ DE+ +R + W+K+WDSCVFG
Sbjct: 220 LWTDKYRPQLFRDLVGDERVHRSAMHWIKEWDSCVFG 256
>gi|393912338|gb|EFO22418.2| hypothetical protein LOAG_06066 [Loa loa]
Length = 782
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 183/663 (27%), Positives = 291/663 (43%), Gaps = 124/663 (18%)
Query: 174 KALNSSSEGQSDRSLPE-----KPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQW 228
K LNS + + +PE + + LWV+KYAP+++ +L+SDE NR +L WL+ W
Sbjct: 175 KVLNSGIDFEVPDIVPEGVEGESVFIQDDLWVEKYAPHTYADLISDETVNRLLLNWLRLW 234
Query: 229 DSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYE 288
D CVF R+ + VL +
Sbjct: 235 DECVFH---RAIPDFVLRS----------------------------------------- 250
Query: 289 NSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDR 348
SN + + S K R P KV+LL GP G GKTTLA + A+H GY VV +NASD+R
Sbjct: 251 TSNQQQLILSSEKPRR----PSHKVVLLAGPAGTGKTTLATLVAQHTGYRVVSLNASDER 306
Query: 349 SSSTIENKILDVVQMNSVM-ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTA 407
++ E D ++ + ADS+P CL++DEIDGA ++ + K V+A
Sbjct: 307 NTVDFEKCFEDALRTTRTLDADSKPNCLILDEIDGA---PTQSIHYLCKAVTAA------ 357
Query: 408 KENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRV 467
+ SL RPVICICN+LY P+LR LR IA V + R+
Sbjct: 358 -------------------GRHSLRRPVICICNNLYTPSLRELRLIALVLQLSRTDEKRL 398
Query: 468 VSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDK-------KKEILNVMDI 520
RL+ I E +K AL+ + + D+RS +N LQF+ +K +L +
Sbjct: 399 TKRLQEISKLEHLKVEPSALSEIIDVCSRDLRSAINNLQFIASQNCATIDRKAVLKFCER 458
Query: 521 GSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVI 580
Q G K S FD W +F+ + + ++ + + L N + D
Sbjct: 459 EKQ-FGDKS---SLFDSWASVFEISRHLDANGRIQDIASRIKQITLISELHGN--ETDRF 512
Query: 581 FDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRL 640
+ G+ N L + V++ + L D + + Q L Y + +++H L
Sbjct: 513 YMGLFTNYLNCK-SAAVLMNASMAIRQLCYYDRIVTSMNSVQDYNLLKYLSAVCVSIHML 571
Query: 641 VSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHI 700
+ + +L +P Y + + ++I +S + + LST +L I P L
Sbjct: 572 LCCRGRTHLSFPTEYHSAIQRYEQSVEIVESVRAGATQK-NFSLSTFAL---EILPYLIC 627
Query: 701 LSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVS-TL 759
+ P L+P+ L S +E + L +VS M SYSLT+ + VS D S +
Sbjct: 628 IVQPDLKPMNTQLYSVRELDLLHSVVSIMRSYSLTFTS-------------VSQDGSVSF 674
Query: 760 SFDPPINEFITFKGYRSNH-----YVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYK 814
F P I++ + F + H L+ A +Q++ HE+E +++ V + LA+G
Sbjct: 675 VFKPAIDQLVMFTEDGACHNNRSSNTLSNAARQLIAHEIELEKLRNV-----DALANGTV 729
Query: 815 ENM 817
N+
Sbjct: 730 GNL 732
>gi|367000513|ref|XP_003684992.1| hypothetical protein TPHA_0C04080 [Tetrapisispora phaffii CBS 4417]
gi|357523289|emb|CCE62558.1| hypothetical protein TPHA_0C04080 [Tetrapisispora phaffii CBS 4417]
Length = 807
Score = 186 bits (471), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 168/606 (27%), Positives = 283/606 (46%), Gaps = 101/606 (16%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LWV+K+ P F EL+ +E TNR VL WL+QW VF E + ++L++ +
Sbjct: 135 LWVEKWKPRKFIELVGNEATNRRVLFWLRQWTPVVF-KETLPINHKILNS-------KKG 186
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
K ND+ +++E D +H+ P +K+LL+
Sbjct: 187 KDYNDT---------------------VQFE--------DPFHR-------PFKKILLIH 210
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVI 377
G PG+GKT++AH+ AK GY V E+NASD+RS + ++ KI + + N+ +++P CL+
Sbjct: 211 GTPGIGKTSVAHIIAKQQGYTVNEINASDERSGTFVKEKIHNDLFSNTF--ENKPICLIA 268
Query: 378 DEIDGALGDGKGAVEVILKMVSAER-KSNTAKENVAKEDQPEKISKK----KGCKKASLL 432
DEIDG++ + G ++V+L ++ ++ +N N+ K ++ K K+ + K L+
Sbjct: 269 DEIDGSIEN--GFIKVLLDILRNDKIATNYYLSNLEKINRRSKTDKEASQIRKKLKHLLM 326
Query: 433 RPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM-----KTSSIAL 487
RP+ICICN+LY+ +L LR ++ F +PS ++ RL +I ES + L
Sbjct: 327 RPIICICNNLYSSSLEKLRPFCEIIPFKKPSEKAIIERLSYILEKESTNKHEGQIDVELL 386
Query: 488 TTLAEYTECDIRSCLNTLQF--LDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKR 545
T+ + ++ D+R+C+N LQF LD+ + G+ + KD S F + EIFQK
Sbjct: 387 KTIIDSSQNDLRNCINNLQFFCLDRN------TNRGTGNIS-KDFKSSWFKVVNEIFQK- 438
Query: 546 KTKRLRNSVSSSSNVSNEFDF--LHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVK 603
S +SN+ L + +G D I G LQ++Y D +LK K
Sbjct: 439 -----------DSQISNKLQMKNLMKTLEVQGGMDKIISGCFSMYLQVKYTDNGLLKPSK 487
Query: 604 CLDCLGNSDLMHQYIMR---TQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQ-RYR 659
D L +D + + + L Y +A+ S I N KS+ +
Sbjct: 488 ISDWLYFNDAIDHSLYNSGISNGGELQRYNSAVALKFFDFFSDIGNKNDIRIKSHDFEVK 547
Query: 660 NAFMEKMDIFKSWHSKIP---PYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSA 716
+I K S+I P +S ++ +SL+ D I P+L L L + +
Sbjct: 548 QLIKGNNEIVKLLLSRIATNNPSLSTFVNKKSLIFD-ILPILDSLVSYDLSSMHNSITKN 606
Query: 717 KEKNDLAQLVS-----------AMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPI 765
K ++L + ++ A + + + N + N LG + + L+ DPPI
Sbjct: 607 KIYDNLIETINSYQLLLNKSSIANILSTHNFSNVNENSKDNYLG-SLDMNRQILALDPPI 665
Query: 766 NEFITF 771
N+ + F
Sbjct: 666 NKIVLF 671
>gi|147818752|emb|CAN76178.1| hypothetical protein VITISV_022750 [Vitis vinifera]
Length = 160
Score = 185 bits (469), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/114 (82%), Positives = 99/114 (86%)
Query: 322 LGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVIDEID 381
LGKTTLAHVAAKHCGY VVE+NASDDRSSSTIE KILDVVQMNSVMADS+P CLVIDEID
Sbjct: 44 LGKTTLAHVAAKHCGYRVVEINASDDRSSSTIEAKILDVVQMNSVMADSKPNCLVIDEID 103
Query: 382 GALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPV 435
GALGDGKGAVEVILKMVS ERK++ K NVAK D+ IS KKG K ASL RPV
Sbjct: 104 GALGDGKGAVEVILKMVSXERKADNRKGNVAKVDESGXISXKKGHKTASLSRPV 157
>gi|118368535|ref|XP_001017474.1| ATPase, AAA family protein [Tetrahymena thermophila]
gi|89299241|gb|EAR97229.1| ATPase, AAA family protein [Tetrahymena thermophila SB210]
Length = 852
Score = 184 bits (466), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 179/723 (24%), Positives = 322/723 (44%), Gaps = 128/723 (17%)
Query: 154 SLTSEPIDVLLQKVEQEAFNKALNSSSEGQSDRSLPEKPVVHE------QLWVDKYAPNS 207
SL PI+ L Q V+++ KA E Q + +K ++ QLWVDKY P
Sbjct: 82 SLLITPIEELEQIVQEQRKAKAAQIEQELQQEIMDEDKQLIKRENLKDRQLWVDKYMPKR 141
Query: 208 FTELLSDEQTNREVLLWLKQWDSCVFGSEIR-------------------STSEEVLSAL 248
+ ELLS ++ NREV+ WLK WD VF +++ S + +
Sbjct: 142 YDELLSFDKINREVMCWLKAWDPIVFKKKLKKSIFQNQYNNQYNNQYNNQSYGRNIFGQV 201
Query: 249 RRHSTISQNKKQNDSSFT-RKNRGNRWSNGN--FRNSNNLEYENSNSK----GIQDSWHK 301
++ + S N + N+G + + N F+ N +++ + K + D +
Sbjct: 202 QKVNNSSSVYNNNFNKIGDEANKGFQAGDQNKFFQGQGNNKFQYTGQKPFYFDLSDDY-- 259
Query: 302 KTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVV 361
S + V+LL GPPG GKTTLA AKHCGY V+E+NAS++R+++ + KI V
Sbjct: 260 ---SVQKMQNSVILLAGPPGSGKTTLARTVAKHCGYKVIEINASEERTAAKLIEKIETVT 316
Query: 362 QMNSVMADS---------RPKCLVIDEIDGAL-GDGKGAVEVILKMVSAERKSNTAK--- 408
+ ++ + +P +++DE+DGA+ + GAV +L + +K+ K
Sbjct: 317 RNEALQFKNDNKAEEQKEKPSLIIVDEVDGAMESESHGAVNHLLDFIFKGQKNIQKKGAG 376
Query: 409 ------------------------------ENVAKEDQP--EKISKKKGCKKASLLRPVI 436
+N+ +ED E+ + K+ + + RPVI
Sbjct: 377 EAQTKQSNQKKKPESKKKKKKDEDDEDGDEDNLNEEDDKGLEEETTKQTAQNVHIRRPVI 436
Query: 437 CICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTEC 496
ICND+Y+ LR LR+ A V F + ++V RL+ IC+ E + L + ++ E
Sbjct: 437 FICNDIYSKGLRELRKKAFVFNFTKARSDKLVQRLREICHKEKLSIDQSGLQKICDHNEN 496
Query: 497 DIRSCLNTLQFLDK--KKEILNVMDIGSQVVGRKDMSRSAFDIWKEIF------QKRKTK 548
DIRS L LQ + K K++ + + I ++ K+ S+S ++ + I + K
Sbjct: 497 DIRSTLMNLQMISKIQKQDNRSKISIDQILMEEKNNSKSILELLECIMMPPINKKDSKID 556
Query: 549 RLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCL 608
LR ++ H+LI N D + + N +++ + K + LD L
Sbjct: 557 ILRYTI-------------HTLIKNTQP-DQLIEATLLNYSKIKNTERFFDKIPQFLDDL 602
Query: 609 GNSDLMHQYIMR-TQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMD 667
++++ +++ +M ++ P + ++ L Q ++ L++P+ + + MD
Sbjct: 603 SLAEILESNLLKHNYEMTKFISLPIINFGLN-LKGQ-ERVKLDFPRDKFTLKKRYKAAMD 660
Query: 668 IFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVS 727
+S +P + +L+ ++ V D +S + I+ P ++ +++S EK DL +S
Sbjct: 661 CIESLLENLPNSDAPYLNNKNFVLDYLSNIYQIIQP----NISSNIISDSEKKDLYTSLS 716
Query: 728 AMVSYSLTYKNTKSDPLLNN-LGNEVSHDVSTLSFDPPINEFITFK--------GYRSNH 778
M+ +SL LL+N + S + F P I + F RS H
Sbjct: 717 IMIDFSL--------KLLDNPFKIDRSGQKFNIYFTPQIERLLLFGNDVPVQRLNERSIH 768
Query: 779 YVL 781
++L
Sbjct: 769 FIL 771
>gi|254571541|ref|XP_002492880.1| Subunit of a complex with Ctf8p that shares some subunits with
Replication Factor C [Komagataella pastoris GS115]
gi|238032678|emb|CAY70701.1| Subunit of a complex with Ctf8p that shares some subunits with
Replication Factor C [Komagataella pastoris GS115]
gi|328353107|emb|CCA39505.1| Chromosome transmission fidelity protein 18 homolog [Komagataella
pastoris CBS 7435]
Length = 747
Score = 182 bits (463), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 170/648 (26%), Positives = 282/648 (43%), Gaps = 102/648 (15%)
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA 368
P++K+LL+ GPPG GKTT+AH+ AK GY V E+NASD+R+ + K+ V+ S
Sbjct: 178 PQKKILLIHGPPGAGKTTVAHIIAKQLGYEVAEINASDERAGPEVREKVHTVLTTQSF-- 235
Query: 369 DSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTA--KENVAKEDQPEKISKKKGC 426
+P CL+ DE+DG+ G ++V+L +V+ + KS + N++K+ KK
Sbjct: 236 SKKPVCLIADEVDGS--SEHGFIKVLLDIVNNDAKSTKSLHYSNLSKD-------KKARL 286
Query: 427 KKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIA 486
+ L RP+I ICND+Y +L LR ++++ F + S+ V RLK IC+ E + S
Sbjct: 287 RSKLLTRPIIAICNDVYTRSLDKLRAVSEIVAFRKSSIRSVKERLKLICDAEKIDISERN 346
Query: 487 LTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRK 546
L + + T+CD+RS LN LQF + ++ N++ G RKD S F I ++F KR
Sbjct: 347 LNAIIDITDCDLRSSLNLLQF--QGDQLQNILGDGD--TKRKDSQLSWFSIALKLF-KRN 401
Query: 547 TKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKC-- 604
TK + +F L +L+ G Y+ + + ++ L Y D K +
Sbjct: 402 TKVEKKV---------QFKELSTLLDTSGVYERVANTCFNSLHSLTYQDAQFGKLAEIAD 452
Query: 605 ----LDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRN 660
DC+ +S HQ Q+M Y PL + ++ N + + N
Sbjct: 453 WLWFYDCISSSIYEHQ----AQEMSRYGTLIPLKM----FLNFSDANNTHETVNMKNNTN 504
Query: 661 AFMEKM----DIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSA 716
+ EK +I KS HS + + L + ++ + HI+ P L L
Sbjct: 505 QYFEKKKAINEIVKSIHSNLEASLFSSLKRSDMASQTLPYVYHIILPNFKNMARLISLKP 564
Query: 717 KEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRS 776
+EK L + + + T + K + PPI+ + + S
Sbjct: 565 EEKIKLTEAAKVLKEFGFTIEQAKDETF-----------TYIQKLVPPIDTVVNCQNELS 613
Query: 777 NHYVLALAVKQVLVH-EVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTNNA 835
+ L Q+L + E+E +R + +T HL D ++ L G +
Sbjct: 614 HQKSLCARANQILPYIEIELKR-LNIT---KRHLTDSEQDFKKLQGTSKRRI-------- 661
Query: 836 AVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFD 895
T LT+ + +S AS+ + G T+ +S FF
Sbjct: 662 ------------------------TGLTSPSNRQSRAASL--QEGGQTQNQLGTSIDFFA 695
Query: 896 RFRKL---SGKVSQDNDNAVQKATVERDSLPLLFKFNEGFTNAVKRPV 940
+ SG+ + Q+ T R + ++NEGF+NAV+R +
Sbjct: 696 KSLSRDGSSGRTTPAPQTNSQRGTTGR----IWVRYNEGFSNAVRRNI 739
Score = 46.2 bits (108), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 197 QLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEV 244
+LW +K+ P +F E+ +E+TNR +L WL++W G + S E V
Sbjct: 125 ELWAEKWRPRNFLEVAGNERTNRHLLNWLRKWSKAAHGEPLPSEEESV 172
>gi|290992604|ref|XP_002678924.1| DNA replication factor C protein [Naegleria gruberi]
gi|284092538|gb|EFC46180.1| DNA replication factor C protein [Naegleria gruberi]
Length = 1003
Score = 182 bits (462), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 185/708 (26%), Positives = 291/708 (41%), Gaps = 143/708 (20%)
Query: 295 IQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIE 354
+ D + KK T PE K+LL+ GPPG+GKTTLAH+AAK GY +EVNASDDRS +
Sbjct: 383 LTDDFQKK--QTIGPEHKILLIAGPPGIGKTTLAHIAAKQAGYEPIEVNASDDRSKEKLI 440
Query: 355 NKILDVVQMNSVMADSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAK 413
+I V QM +V +PK L++DEIDG + K V ILK+ + T KE
Sbjct: 441 PEIQKVTQMQTVFGSKKPKLLILDEIDGVHNSENKSVVSEILKIAYPKVSKETKKEKPES 500
Query: 414 EDQPEKISKKKGCKKA-----SLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSV---- 464
+ S K K LLRP+ICICND Y+P L+ LRQ +K+ VF + V
Sbjct: 501 SKSKKNKSGVKVEKNKKKKDPGLLRPIICICNDHYSPGLKELRQRSKLLVFRRDDVRTDN 560
Query: 465 -SRVVSRLKHICNNESMKTSSIA---LTTLAEYTECDIRSCLNTLQFL--DKKKEILNVM 518
R+V RL I E + SS++ LT + ++ DIRSCLNT+QF+ DK K I +M
Sbjct: 561 TQRIVDRLSMILKREHL-LSSVSRHDLTLFVKDSDNDIRSCLNTIQFMSFDKSKSITEMM 619
Query: 519 DIGSQVVGRKDMSRSAFDIWKEIFQKRK------TKRLRNSVSSSSNVSNEFDFLHSLIS 572
I KD+ + FD IF+ +K TK N +S +N+ E D + SL+
Sbjct: 620 SIT------KDVKKDIFDAMNIIFKTKKADSTLITKYQHNILSLYNNLLGELDKMDSLM- 672
Query: 573 NRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPP 632
+G EN M L+ + SD++ R Q+ L VY+
Sbjct: 673 ---------NGCFENYPTFSTGSS-MKDISNVLEWVEWSDMLDVTSNRHQERSLQVYR-- 720
Query: 633 LAITVHRLVSQIQKPN-------LEWPKSYQRYRNAFMEKMDIFKSWHSK---------- 675
T+ ++ +K +++PK ++ + K +IFK+ HS
Sbjct: 721 -VATLTKIFKDCKKSGFDISSDFIQYPKQQGDFKRSLTHKENIFKTLHSNCFTPNTYDSE 779
Query: 676 -----------------IPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKE 718
+ P+I + LS + + L L+ ++ + + E
Sbjct: 780 DYSTCPTAMSVKDLATDVSPFIYQILSNKHFANLNSGSALSSLAHSGMKGLRQLFRNDME 839
Query: 719 KNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNH 778
+ +++ +SY + K T + N+ DPP++E + +
Sbjct: 840 RFAFERILDICISYGINVKQTYVNETHENM------------IDPPLDEVSVYPSNQKQE 887
Query: 779 YVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTNNAAVS 838
+ Q Q V I +S +K+ + A + K N +
Sbjct: 888 KTSQKTIPQPPNSSTPNQENNPVVISES------FKKIISSALHFEKLERKFKKKNEQTN 941
Query: 839 AKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDRFR 898
+++EK KS P + N S + + RS S+
Sbjct: 942 EEMLEKIKSSPMASPKNVSAQVAIEQKNRRRSQLKSIH---------------------- 979
Query: 899 KLSGKVSQDNDNAVQKATVERDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
+ +F++G TN+++RP + +FL
Sbjct: 980 ------------------------TMYLEFHDGMTNSIRRPAKTSEFL 1003
>gi|313238599|emb|CBY19986.1| unnamed protein product [Oikopleura dioica]
Length = 752
Score = 182 bits (461), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 162/615 (26%), Positives = 264/615 (42%), Gaps = 124/615 (20%)
Query: 199 WVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNK 258
W Y +TELLSDE NR ++ W+K+WD CVF + SE R ++ K
Sbjct: 213 WTSTYRAKKYTELLSDEYINRTIIKWMKKWDPCVFNKK----SE-------RSKKKAEEK 261
Query: 259 KQNDSSFTRKNRGNR-WSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
KQ +KNR + WS NL E + G P+ KVL+LC
Sbjct: 262 KQMTEEEKKKNRFKKAWSE-------NLAEEVDEEDPL-----------GRPKMKVLMLC 303
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVI 377
G PGLGKTTLA VAAKHCGY+ VE+NASDDR+ + + K+ D + NS + +P CL++
Sbjct: 304 GAPGLGKTTLAFVAAKHCGYNSVEINASDDRAGTEFKRKVDDAL-TNSSATNKKPSCLIL 362
Query: 378 DEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVIC 437
DEID L
Sbjct: 363 DEIDDLL---------------------------------------------------FA 371
Query: 438 ICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECD 497
+ Y PALR LR+ A + F S++ SRL+ +C+ +K + L LAE +E D
Sbjct: 372 FATNPYVPALRELRKEALIVNFNGIDRSKLTSRLQEVCDQNQVKPEAGTLQKLAEKSEDD 431
Query: 498 IRSCLNTLQFLDKKKE--ILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVS 555
IRSC+N LQFL E + + D+ +G KD R+ KE+ + K N +
Sbjct: 432 IRSCINALQFLSMASEDKSVTISDLKKCSMG-KDQQRTLQYALKEVLAIGRNKS-GNRIQ 489
Query: 556 SSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMH 615
+++ ++ L+SN Y++ + + ++ Y K + G +D +
Sbjct: 490 DVIDIARQYGETDKLLSN--TYELCGEVRAPSSMEQLY---------KSREWYGWADQLT 538
Query: 616 QYIMRTQQMPLYVYQPPLAITVHRLVSQ------IQKP-NLEWP-KSYQRYRNAFMEKMD 667
++ ++Q L + +H ++Q + KP N+ W + Q+ R + +
Sbjct: 539 HFVQKSQNYALEAEKVYAVAGIHYNIAQNSEIEGVLKPQNVAWEMRQKQQIRENLLTGVR 598
Query: 668 IFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVS 727
+ ++ +I L +++S +L +L P +R V LLS E+ L Q V
Sbjct: 599 NGLNLKTR-KSFIGFELV------NALSNVLSMLE-PNIRSVNPSLLSKTEQKALQQCVG 650
Query: 728 AMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITF-KGYRSNHYVLALAVK 786
V + L+ KN K++ + + +PP+ F + L K
Sbjct: 651 TFVDFGLSLKNVKNEETM----------TYNMVVEPPLKIITGFPDECKMAKRGLTQQTK 700
Query: 787 QVLVHEVEKQRIMQV 801
++ E+E++++ ++
Sbjct: 701 LLISSEIEREKVRRI 715
>gi|363749517|ref|XP_003644976.1| hypothetical protein Ecym_2429 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888609|gb|AET38159.1| Hypothetical protein Ecym_2429 [Eremothecium cymbalariae
DBVPG#7215]
Length = 779
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 145/508 (28%), Positives = 241/508 (47%), Gaps = 66/508 (12%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LW +K+ P+ F +L+ +E+ NR V+ WL+QW VFG EV
Sbjct: 146 LWAEKWRPSKFLDLVGNEKNNRRVMRWLQQWAPVVFG--------EV------------- 184
Query: 258 KKQNDSSFTRKN-RGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLL 316
+ D S R+ RG + + EY D +H+ P++K+LL+
Sbjct: 185 -PKKDPSLNRQQLRGGQED----QVIQEQEY---------DPFHR-------PDKKILLI 223
Query: 317 CGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLV 376
GPPG+GKT++AHV AK GY V+E+NASD+R+ + ++ K+ + + N D +P L+
Sbjct: 224 HGPPGIGKTSVAHVVAKQAGYVVMEINASDERAGTKVKEKVHNCL-FNESFND-KPVLLL 281
Query: 377 IDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVI 436
DEIDG++ +G V V+L ++ + S +E + K Q + ++ L RP+I
Sbjct: 282 ADEIDGSIENG--FVRVLLDIIRHD--SRATRELILKHSQLNRKHRRTKYSGKILTRPII 337
Query: 437 CICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTEC 496
+CN++Y AL LRQ ++ F P + ++ RL+++C E ++ + + E ++
Sbjct: 338 AVCNNIYTNALEELRQHCQIVAFRPPGDAAIIERLEYVCKKERVRMDRSLVKQVVESSQG 397
Query: 497 DIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSS 556
D+R+ LN LQFL + DI S+ +KD+ S F I ++F+K K
Sbjct: 398 DVRNSLNNLQFLSVTEN--KDGDINSR---QKDIGVSWFKICNQLFKKDLHK-------- 444
Query: 557 SSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQ 616
++ +F L + YD I +G + Q++Y D + K + D L SD M +
Sbjct: 445 --DIKTQFQDLLCQVEVSASYDKIIEGCFQLFPQVRYSDTGLTKPSQISDWLFFSDRMAK 502
Query: 617 YIMRTQQMPLYVYQPPLAITVHRLVSQIQ-KPNLEWPKSYQRYRNAFMEKMDIFKSWHSK 675
+ L Y P A+T +L S + K +L R + I S
Sbjct: 503 SLYEFNG-ELMRYCPATAMTFFQLFSDVMNKQDLRIKSMDFEVRESKRANRSIASSILYG 561
Query: 676 IPPYISRHLSTESLVEDSISPLLHILSP 703
IP +S SL+ + + L +IL+P
Sbjct: 562 IPAISRSFVSVNSLILEILPHLDYILTP 589
>gi|260801163|ref|XP_002595465.1| hypothetical protein BRAFLDRAFT_69171 [Branchiostoma floridae]
gi|229280712|gb|EEN51477.1| hypothetical protein BRAFLDRAFT_69171 [Branchiostoma floridae]
Length = 557
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 150/539 (27%), Positives = 241/539 (44%), Gaps = 74/539 (13%)
Query: 431 LLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTL 490
LLRP+ICICNDLY +LR LR ++ V F +R+ RL I +S++T L L
Sbjct: 70 LLRPIICICNDLYVLSLRRLRPLSLVLHFPPTDATRLAGRLFEIARRQSVRTDMTTLLAL 129
Query: 491 AEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQ--KRKTK 548
E TE DIRSC+NTLQF+ + L++ D+ S VG+KD + F +W++IFQ ++K K
Sbjct: 130 CEKTEKDIRSCVNTLQFVHSRGTDLSLSDVHSMAVGQKDQQKGLFTVWQQIFQVPRQKRK 189
Query: 549 RLRN---------------SVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQY 593
R N SV+ + F + L S G+Y+ G+ EN L+ ++
Sbjct: 190 RWNNPHDVAAGQLQAGEDVSVTQPHTPAGRFQHILHLTSGNGEYEKTCQGLFENYLEAKF 249
Query: 594 HDPVM-LKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWP 652
D + + T+ C + LG DL++ I Q L Y P + H L + P L +P
Sbjct: 250 KDAYLDVVTMGC-EWLGFYDLVNNIISHIQTFILMRYIPYTFVAFHMLFAGSTAPKLSYP 308
Query: 653 KSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALH 712
S E + + ++ I +S + + + + LL I+ P+ RPV
Sbjct: 309 SSQYECYQKMTETQSLRAAQQGEMSAVIRSRVSQSAFLLELLPALLDIIQ-PSFRPVNSQ 367
Query: 713 LLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFK 772
L SAKEK +A L+ M++Y+LTY+ ++ +P + E I F
Sbjct: 368 LFSAKEKQQMADLIHTMIAYNLTYQQERTQ-----------EGQYQYLLEPNMEEAIRFS 416
Query: 773 GYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSKT--ESA 830
+ L A KQ++ E+E +++ +SE L N+ E+ KT +S
Sbjct: 417 D-QPPKKQLTYAAKQLIAKEIEVEKMR-----RSEALLMSRNRNLPTPEEKVQKTGQKSD 470
Query: 831 KTNNAAVS---AKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSF 887
T + AV AKL K ++ + V+ R+ AS+
Sbjct: 471 ATADGAVPNHLAKLQPKKIAVAEEKPAVDFFGRVIKKKTPERNKDASIS----------- 519
Query: 888 RSSSSFFDRFRKLSGKVSQDNDNAVQKATVERDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
+Q N V +A + + +KFNEGF+NA+++ + ++D L
Sbjct: 520 -----------------NQSNSRQVSRAGMG----TIFYKFNEGFSNAIRKNIPIQDLL 557
>gi|297735910|emb|CBI18686.3| unnamed protein product [Vitis vinifera]
Length = 151
Score = 180 bits (456), Expect = 4e-42, Method: Composition-based stats.
Identities = 95/132 (71%), Positives = 99/132 (75%), Gaps = 21/132 (15%)
Query: 324 KTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGA 383
KTTLAHVAAKHCGY VVE+NASDDRSSSTIE KIL VVQMNSVM D +P CLVIDEIDGA
Sbjct: 41 KTTLAHVAAKHCGYRVVEINASDDRSSSTIEAKILYVVQMNSVMVDLKPNCLVIDEIDGA 100
Query: 384 LGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLY 443
LGDGKGA+EVILKMVS ER KG K ASL RPVICICNDLY
Sbjct: 101 LGDGKGAMEVILKMVSTER---------------------KGHKIASLSRPVICICNDLY 139
Query: 444 APALRSLRQIAK 455
AP LR LRQ+AK
Sbjct: 140 APTLRPLRQVAK 151
>gi|401624313|gb|EJS42375.1| ctf18p [Saccharomyces arboricola H-6]
Length = 739
Score = 178 bits (452), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 182/685 (26%), Positives = 297/685 (43%), Gaps = 130/685 (18%)
Query: 146 LDVRAHSNSLTSEPIDVLLQKVEQEAFNKALNSSSEGQSDRSLPEKP------VVHEQLW 199
LD S+ I+ LL K+ N+SSE DRS +K V + LW
Sbjct: 69 LDTVWRSDDTYGININFLLDKI---------NASSE---DRSYAQKASTVATKVDNNTLW 116
Query: 200 VDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKK 259
V+K+ P F +L+ +E+ NR +L WL+QW VF ++ E K+
Sbjct: 117 VEKWRPKKFLDLVGNEKINRRMLGWLRQWAPAVFKEQLPKLPSE--------------KE 162
Query: 260 QNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGP 319
QN+ NR P++++LLL GP
Sbjct: 163 QNEIEPDPLNR--------------------------------------PQKRILLLHGP 184
Query: 320 PGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVIDE 379
PG+GKT++AHV K G+ V E+NASD+R+ ++ KI +++ ++ D+ P CL+ DE
Sbjct: 185 PGIGKTSVAHVIVKQSGFSVSEMNASDERAGPMVKEKIHNILFNHTF--DTNPVCLIADE 242
Query: 380 IDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICIC 439
IDG++ G + +++ ++ + K+ N QP K KK + L+RP+ICIC
Sbjct: 243 IDGSVE--SGFIRILVDIIQNDSKAT----NKLLYGQPNKKKDKKKTSEL-LIRPIICIC 295
Query: 440 NDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIR 499
N+LYAPAL L+ ++ +PS S + RL IC+ E+M + L + + D+R
Sbjct: 296 NNLYAPALEKLKPFCEIVAVKRPSDSTLQERLNMICHKENMDVPIKTINELIDLAQGDVR 355
Query: 500 SCLNTLQFLDKKKEILNV-------MDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRN 552
+C+N LQFL + N + + KD S F I ++F++ + +++
Sbjct: 356 NCINNLQFLASNIDQKNADSLDKSNFNKTTWASSNKDSPVSWFKIVNQLFRRDPHRDIKD 415
Query: 553 SVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSD 612
++ LH + N G+ D I G ++Y D + K K D L D
Sbjct: 416 QF---------YELLHQVELN-GNLDKIMQGCFNVFPYVKYSDDGIRKPAKISDWLFFHD 465
Query: 613 LMHQYIMRTQQMPLYVYQPPLAITVHRLVSQI-QKPNLEWPKSYQRYRNAFMEKMDIFKS 671
LMHQ M Q L Y + + + I K ++ + R +DI +S
Sbjct: 466 LMHQS-MYGQNGELLRYSALVPLVFFQTFGDIANKEDIRMKNNEYEQRELQRATLDIVES 524
Query: 672 WHSKI---PPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSA 728
I P ++ +SLV + + L ++S + L L ++ + LV
Sbjct: 525 VIRHISVQSPLMASFTDKKSLVFEVLPYLDSMISSDFNKVKNLKL----KQTIMETLVPL 580
Query: 729 MVSYSLTYKNTKSDPLLNNLGNEVSHDV---STLSFDPPINEFITF--------KGYRSN 777
+ SY L NL + S S L+ DPPI++ + + R N
Sbjct: 581 LKSYQL------------NLIQDCSGGFDSRSVLTIDPPIDKVVLLDLKHINEVEHKRPN 628
Query: 778 HYVLALAVKQVLVHEVEKQRIMQVT 802
++ LA ++ V+K+ I QVT
Sbjct: 629 NFNTLLA--KIEETRVKKRNIDQVT 651
>gi|410074367|ref|XP_003954766.1| hypothetical protein KAFR_0A01930 [Kazachstania africana CBS 2517]
gi|372461348|emb|CCF55631.1| hypothetical protein KAFR_0A01930 [Kazachstania africana CBS 2517]
Length = 780
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 171/643 (26%), Positives = 296/643 (46%), Gaps = 74/643 (11%)
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA 368
P +K+LL+ GPPG+GKT++AHV K G+ V E+NASD+R+ +++K+ + + N +
Sbjct: 194 PNKKILLIHGPPGIGKTSVAHVVTKQAGFSVAEINASDERAGQFVKDKVHNTL-FNHTFS 252
Query: 369 DSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKK 428
DS P CL+ DEIDG++ G + V++ +++ + K+ +A + SK K +K
Sbjct: 253 DS-PVCLIADEIDGSVESG--FIRVLIDIINKDNKATNRLRYLA---NTQTKSKDKKRRK 306
Query: 429 ASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALT 488
L+RP+I ICN+LYAPAL L+Q ++ F +PS + + RL+HIC+ E + +
Sbjct: 307 NLLVRPIIAICNNLYAPALEKLKQHCEIISFKRPSDNALQERLEHICSKERLDVPIKTIN 366
Query: 489 TLAEYTECDIRSCLNTLQFLDKKKEILNVM-----DIGSQVVGRKDMSRSAFDIWKEIFQ 543
L + + D+R+C+N LQF+ LN + D S KD+S S F + +IF+
Sbjct: 367 DLIDLAQGDVRNCINNLQFMATNSGSLNQISPEKNDSSSWDTNGKDISISWFKLVNQIFR 426
Query: 544 KRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVK 603
K + ++ S D L + N G+YD I G ++Y D ++K +
Sbjct: 427 KDPHRSPKDQFS---------DLLRQVEMN-GNYDRILYGCFTLFPSVKYSDIGVMKPAE 476
Query: 604 CLDCLGNSDLMHQYIM-RTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAF 662
D L DLM + + ++ Y PL + K +L R
Sbjct: 477 ISDWLYFHDLMFKSLFEHNGELLRYSSSVPLMF-FQKFGDIANKTDLRVKNMDFEQREVT 535
Query: 663 MEKMDIFKSWHSKI---PPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEK 719
+DI S I P ++ + SL+ + + + +++S + + + K K
Sbjct: 536 RANLDIVNSICQAIKTESPGMAAFIHRTSLIFEVLPYVDYMISTDLTK-----IKNVKVK 590
Query: 720 NDLAQ-LVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNH 778
N + + L+ + + LT L N+ ++ S + L PPI++ R
Sbjct: 591 NIIIENLLGILKNMQLT---------LANMNDDSSEFRTVLGVTPPIHKVALLDQKRMKE 641
Query: 779 YVLALAVK-QVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTNNAAV 837
+ Q+L+ + E++R+ K HL +E + +ED++ + AK +N A
Sbjct: 642 AMNKRTGNFQLLLAKSEEKRV------KKRHLDQVLREK---SIQEDARNKRAKVSNNAG 692
Query: 838 SAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDRF 897
+ KS+ + N D SR + S K K SF S++S
Sbjct: 693 NTIDFFKSQYASMKKNSNNE--------DDSRPVSNSTK------GKLSFISANS----- 733
Query: 898 RKLSGKVSQDNDNAVQKATVERDSLPLLFKFNEGFTNAVKRPV 940
+ K D+D A K ++ + K+ GF+NAV++ V
Sbjct: 734 ---NAKEEGDDDKAGHKNRSSGENSRMWIKYKAGFSNAVRKNV 773
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 31/42 (73%)
Query: 196 EQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEI 237
++LWV+K+ P SF +L+ +E+TNR +L WL+QW VF ++
Sbjct: 131 QKLWVEKWRPKSFIDLVGNEKTNRRILGWLRQWSYAVFKEQL 172
>gi|50304385|ref|XP_452142.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641274|emb|CAH02535.1| KLLA0B13739p [Kluyveromyces lactis]
Length = 763
Score = 177 bits (450), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 132/453 (29%), Positives = 220/453 (48%), Gaps = 74/453 (16%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LW +K+ P+ F +L+ +E+ NR VL WL+QW VF E+ L+ ++HS
Sbjct: 114 LWTEKWRPHKFLDLVGNERLNRRVLFWLRQWSPLVFDEELPE-----LTTFKKHSN---- 164
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
+ND+S EY + + P +++LL+
Sbjct: 165 -PENDASD--------------------EYADPLKR---------------PMKRILLIH 188
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVI 377
GPPG+GKT++AHV AK GY V+E+NASD+R+ + +K+ + + N D +P CL+
Sbjct: 189 GPPGIGKTSVAHVVAKQAGYSVMEINASDERAGDRVRHKVQNAL-FNHTFND-KPVCLIA 246
Query: 378 DEIDGALGDGKGAVEVILKMVSAERKSN-------TAKENVAKEDQPEKISKKKGCKKAS 430
DEIDG++ +G ++V+L ++ ++ K+ T K++ K ++ KKK K
Sbjct: 247 DEIDGSVENG--FIKVLLDIIKSDSKATHDLITGRTGKDHHFKSSA--RLQKKKKNKDKL 302
Query: 431 LLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTL 490
L RP+I +CN++YA AL LR +++ F +PS + ++ RL+++C E + S L L
Sbjct: 303 LTRPIIAVCNNVYANALEKLRPHSEIIHFQKPSENALMERLEYVCKKEKVHVSKTLLKEL 362
Query: 491 AEYTECDIRSCLNTLQFL-----DKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKR 545
A ++ D+R+ LN LQF+ DK K + N D RKD+ + F I IF++
Sbjct: 363 AVLSQGDVRNSLNNLQFMTKNGFDKDKLVTNGSDAEWTDDKRKDIGITWFKICNSIFKR- 421
Query: 546 KTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCL 605
+V + L + G+Y+ I +G ++ Y D + K +
Sbjct: 422 ---------DPYLDVKLQLKNLLRDVETSGNYERIIEGCFTLFPEVNYSDHGVTKPGRIS 472
Query: 606 DCLGNSDLMHQYIM-RTQQMPLYVYQPPLAITV 637
D L +D M Q + ++ Y PL V
Sbjct: 473 DWLFFNDRMFQSLFEHNGELLRYCAFTPLEFFV 505
>gi|345561053|gb|EGX44168.1| hypothetical protein AOL_s00210g40 [Arthrobotrys oligospora ATCC
24927]
Length = 1190
Score = 177 bits (450), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 129/389 (33%), Positives = 183/389 (47%), Gaps = 75/389 (19%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LW +KY FT+LL DE+T+R +L WLK WDS VFG+ +
Sbjct: 430 LWTEKYRAKRFTDLLGDERTHRHILRWLKGWDSIVFGA-------------------AAG 470
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
KK + S + + R R +LL+
Sbjct: 471 KKNDKSMLSEEQRSRR---------------------------------------ILLVT 491
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV-MADS---RPK 373
GPPGLGKTT+AHV AK GY +E+NASDDR++S ++N+I DVV N+V M D+ +P
Sbjct: 492 GPPGLGKTTMAHVLAKQAGYEPLEINASDDRTASVVKNRIKDVVGTNTVHMGDAKRGKPI 551
Query: 374 CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKED-QPEKISKKKGCKKASLL 432
C+VIDEIDG GDG G I +V + K N D Q K K +K L
Sbjct: 552 CVVIDEIDGVTGDGAGEGGFIKALVDLIEQD---KRNSGDPDAQVMKRKGGKKGEKFRFL 608
Query: 433 RPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAE 492
RP+I +CNDLYAP+L+SLR + ++ +P + V+ RLK I E ++ S A+ L E
Sbjct: 609 RPIIAVCNDLYAPSLKSLRPLCEIVYTKRPPLGLVLGRLKEIFEREGVEGDSDAIRRLVE 668
Query: 493 YTECDIRSCLNTLQFLDK-KKEILNVMDIGSQVVGRKDMSRSAFDIWKE-----IFQKRK 546
+ +++ F+ + ++ VM G GR +S +A + KE K K
Sbjct: 669 LEGGN--GNISSADFMAEWSGDVRGVMVAGEWACGRL-LSAAAKENLKEPAKTSTIGKGK 725
Query: 547 TKRLRNSVSSSSNVSNEFDFLHSLISNRG 575
K + + V EF L +N G
Sbjct: 726 GKEIPKIRMTKKWVEEEFSNGGGLGANDG 754
>gi|50286345|ref|XP_445601.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524906|emb|CAG58512.1| unnamed protein product [Candida glabrata]
Length = 721
Score = 177 bits (450), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 176/637 (27%), Positives = 290/637 (45%), Gaps = 88/637 (13%)
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA 368
P +++L+L GPPG+GKT++AHV AK G+ V E+NASD+R+ + + +K+ + + +S
Sbjct: 161 PMKRILMLNGPPGIGKTSVAHVVAKQAGFSVAEINASDERAGTLVRDKVHNTLFNHSFTG 220
Query: 369 DSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKK 428
+ P CL+ DEIDG++ G V+V++ +V+A++++ T + K + + K +
Sbjct: 221 E--PVCLIADEIDGSVESG--FVKVLIDIVNADKRA-TDNYVLKKNARGKNNGKSNRYRP 275
Query: 429 ASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALT 488
LLRP+I ICN+LYAPAL LR + ++ +PS + V RL HIC E + +
Sbjct: 276 KLLLRPIIVICNNLYAPALEKLRPLCEIITLRKPSDNSVRERLTHICMKERINLGMKTIN 335
Query: 489 TLAEYTECDIRSCLNTLQFLDK-KKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKT 547
L + +E DIR+C+N LQF K + N ++ +G KD+S S F I +IF RK
Sbjct: 336 ELIDISEGDIRNCVNNLQFQSKGNHKTSNNDNVSEDTLGLKDISLSWFKIVNQIF--RKD 393
Query: 548 KRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDC 607
L N +F L I +YD + G H ++Y D + K D
Sbjct: 394 PHLDN--------KRQFIRLARKIEKVDNYDRVVTGCHTLFPHVKYSDSGLRKPAAMADW 445
Query: 608 LGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMD 667
L + M + M L Y + + H+ I K QR +NA E+ +
Sbjct: 446 LYFHEQMFKS-MFEHNGELLRYCAIVPMVFHQKFGDISN------KDDQRIKNADYEQRE 498
Query: 668 IFKSWHSKIPPYISRHLSTESLVEDSISPLLHI-LSPPTLRPVALHLLSAKEKNDLAQLV 726
K+ S I I + LST SPLL ++ L L L + +D++++
Sbjct: 499 ARKAVES-ITESIMKKLST-------FSPLLASNMNKKDLGFEILPYLDSMIASDISKIK 550
Query: 727 SAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLALAV- 785
A K +LNN+ N + D+ L E T +G VL +
Sbjct: 551 DA----------KKKQAVLNNIINLI--DLFQLELLETRGEHYTSRG------VLMIEPP 592
Query: 786 --KQVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTNNAAVSAKLIE 843
K VL+ E++K +VT ++ +L N+ LA +E+ K N
Sbjct: 593 IDKVVLIDEMKKN---EVTTKRAANL------NLILAKQEEIKVRKRHLNQV-------- 635
Query: 844 KSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDRFRKLSGK 903
+ N STV T +S+ S++ S + K+ D +
Sbjct: 636 ---------EANKGKSTVEET--TSKRQKISIENFSKANNDKT-------VDMLKSQYTA 677
Query: 904 VSQDNDNAVQKATVERDSLPLLFKFNEGFTNAVKRPV 940
+ Q+ + + E + + + K+ EGF++AV++ V
Sbjct: 678 IQQNTTDQNKSTNNESEEVKIWIKYKEGFSDAVRKKV 714
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEI 237
LWV+K+ P F +L+ +E+ NR +L WL+QW+ VF ++
Sbjct: 104 LWVEKWRPKKFMDLVGNEKNNRRILKWLRQWNFAVFKEQL 143
>gi|158253724|gb|AAI54158.1| Zgc:113153 protein [Danio rerio]
Length = 493
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 127/357 (35%), Positives = 185/357 (51%), Gaps = 66/357 (18%)
Query: 116 GDCLPVTAPSGGDRVYVKISSSGVEERVKKLDVRAHSNSLT-----SEPIDVLLQKVEQE 170
GD + VT S G+RVY+ + E+ K D RA NSL + PI+VL +++ +
Sbjct: 178 GDYITVTD-SMGNRVYL----NKKEDVEKTPDPRAFRNSLNGLGLLAVPIEVLKEQIAER 232
Query: 171 AFNKALNSS----------------SEGQSDRSLPEKPVVHE---QLWVDKYAPNSFTEL 211
+ + S +E Q+D + E +LWVD+++P +T+L
Sbjct: 233 RHRQVVEESQRLTELMKSGIDSDLLAEEQTDSGVDGDSGEDEASSRLWVDQFSPQHYTDL 292
Query: 212 LSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRG 271
LSD+ TNR +L WLK WD+ VFG E R+ + + N ++ +N+
Sbjct: 293 LSDDFTNRCLLKWLKLWDTVVFGRE------------RKSRPVPVEARSNFTNAQNQNQA 340
Query: 272 NRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVA 331
R+ + LE E D + + P+ KV LL GPPGLGKTTLAH+
Sbjct: 341 QRFKTKSQMTEEILEAE-------LDQYKR-------PKFKVALLSGPPGLGKTTLAHII 386
Query: 332 AKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM-ADSRPKCLVIDEIDGALGDGKGA 390
AKH GY+VVE+NASDDRS+ + +I QM SV+ A+ +P CL+IDEIDGA A
Sbjct: 387 AKHAGYNVVEINASDDRSAELFQKRIDTATQMKSVLGANEKPNCLIIDEIDGAPA---AA 443
Query: 391 VEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPAL 447
+ ++L ++ + + + V KKK K++ LLRP+ICICNDLY PAL
Sbjct: 444 INILLATLNRKDSKDGEETGV-------NALKKKKKKQSVLLRPIICICNDLYVPAL 493
>gi|17541368|ref|NP_501841.1| Protein K08F4.1 [Caenorhabditis elegans]
gi|3878374|emb|CAA93081.1| Protein K08F4.1 [Caenorhabditis elegans]
Length = 850
Score = 176 bits (446), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 164/641 (25%), Positives = 272/641 (42%), Gaps = 113/641 (17%)
Query: 168 EQEA-FNKALNSS---SEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLL 223
EQEA F++ L + SE ++++S PE LWV+KY +F++LLSD NR +L
Sbjct: 235 EQEAEFSRMLKETETPSEYENNKSHPESS-----LWVNKYEAKNFSDLLSDSTVNRNILT 289
Query: 224 WLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSN 283
WLK WD CVF ++ +++L++L +K+ + NG R
Sbjct: 290 WLKMWDECVFHQKV----DDLLASL--------GEKEREVLHM--------DNGKIRR-- 327
Query: 284 NLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVN 343
P K+LLL GP GLGK+TLA + A+ GY ++VN
Sbjct: 328 -------------------------PSSKMLLLSGPAGLGKSTLARIVARQAGYSTIDVN 362
Query: 344 ASDDRSSSTIENKILD--VVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAE 401
ASD R+ + + NK+L+ V ++ AD RP CL++DEIDG ++ I +V
Sbjct: 363 ASDARTVADL-NKVLEGAVKTSRTLDADQRPACLILDEIDGT------PIDTIRHLVRCI 415
Query: 402 RKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQ 461
+ + K ++ RP+I ICN+LY PALR LR +A +
Sbjct: 416 QATG----------------------KKAIRRPIIGICNNLYTPALRDLRGVAWCVQLVA 453
Query: 462 PSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLD----KKKEILNV 517
+ RL+ IC+ E ++ L L E D+R +NTLQ++ K + +
Sbjct: 454 TKQDVLAKRLEEICDRERLRCDLSTLRKLCELCANDMRHSINTLQWVAVAARKSNRAIGM 513
Query: 518 MDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDY 577
I + K S S F+ W I + K + + S V + + ++ G
Sbjct: 514 KLIHEVIEKEKGGSASIFEHWSSILELSKHTDAKGGIKS---VRERIFDIERISADHGGE 570
Query: 578 DVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITV 637
+ G+H N L P+ + K D + + + Q + Y +++
Sbjct: 571 ERFVSGLHANYLVTL---PIGV-IRKASTWFLFYDDIQKIVHSLQNWSVLKYVFSFFVSL 626
Query: 638 HRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPL 697
H ++ + + +P+ Q E + + S +R + L+ D + +
Sbjct: 627 HLNIATHARVPIAYPQLEQNIFQKTKESEETISAVRS--CGQSTRGAPKKELLLDILPFI 684
Query: 698 LHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVS 757
++I+ PP ++P+ L + +E Q VS M Y LTY T +N L
Sbjct: 685 VNIVQPP-IKPMNESLYNQRELATFNQTVSIMCDYGLTYTATMVKDQVNWL--------- 734
Query: 758 TLSFDPPINEFITFKGYRSNHYVLALAVKQVLVHEVEKQRI 798
F P I+ F LA A +Q++ H++ R+
Sbjct: 735 ---FTPSIDILTMFPLDGPKRPYLANATRQMIAHKITLMRV 772
>gi|297745155|emb|CBI38994.3| unnamed protein product [Vitis vinifera]
Length = 122
Score = 176 bits (445), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 81/112 (72%), Positives = 95/112 (84%)
Query: 598 MLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQR 657
M KTVKCL+ LG SDL+HQY+MRTQQM L VYQP AI +HRL++Q+QKP +EWPKS+ R
Sbjct: 1 MQKTVKCLNTLGISDLVHQYVMRTQQMSLNVYQPLTAIRLHRLIAQVQKPIIEWPKSFMR 60
Query: 658 YRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPV 709
Y+ FMEK DI +SWH+KI PYISRHLS +S VEDS+SPLLHILSPPTLRPV
Sbjct: 61 YQMTFMEKRDILRSWHNKIAPYISRHLSIKSFVEDSVSPLLHILSPPTLRPV 112
>gi|268537192|ref|XP_002633732.1| Hypothetical protein CBG03417 [Caenorhabditis briggsae]
Length = 840
Score = 176 bits (445), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 167/655 (25%), Positives = 268/655 (40%), Gaps = 124/655 (18%)
Query: 164 LQKVEQEAFN----KALNSSSEGQSDRS--LPEKPVVHEQ--LWVDKYAPNSFTELLSDE 215
Q + QEA N K N +E +S+ S + E VH + LWV+KY +F +LLSD
Sbjct: 209 FQTICQEAENIRKTKEANRINEQESEFSQMMNESLPVHSESSLWVNKYEAKNFADLLSDS 268
Query: 216 QTNREVLLWLKQWDSCVFGSEIRSTSEEVLSAL-RRHSTISQNKKQNDSSFTRKNRGNRW 274
NR +L WLK WD CVF ++ + +L++L R + Q
Sbjct: 269 TVNRNILTWLKMWDECVFQRKV----DNLLASLGEREKDVLQ-----------------M 307
Query: 275 SNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKH 334
NG R P K+LLL GP GLGK+TLA + A
Sbjct: 308 DNGKIRR---------------------------PSMKMLLLSGPAGLGKSTLARIVASQ 340
Query: 335 CGYHVVEVNASDDRSSSTIENKILD--VVQMNSVMADSRPKCLVIDEIDGALGDGKGAVE 392
GY ++VNASD R+ + + NK+L+ V ++ D RP CL++DEIDG ++
Sbjct: 341 AGYATIDVNASDARTVADL-NKVLEGAVKTSRTLDGDQRPACLILDEIDGT------PID 393
Query: 393 VILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQ 452
I ++ + + K ++ RP+I ICN+LY PALR LR
Sbjct: 394 TIRHLIRCLQATG----------------------KKAVRRPIIGICNNLYTPALRDLRG 431
Query: 453 IAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFL---- 508
+A + RL+ IC+ E+++ L L + D+R +NTLQ+
Sbjct: 432 VAWCVQLSATKQDALAKRLEQICDMENLRCDLSTLRKLCDLCANDMRHSINTLQWAAVAS 491
Query: 509 DKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLH 568
+K K + + I V K + S F+ W I + K + + N +
Sbjct: 492 NKTKRSITMKLIHEVVEKEKGGAASIFEHWSSILELSKHVDAKGGI---KNTRERVFVIE 548
Query: 569 SLISNRGDYDVIFDGIHENILQLQYHDPVMLKTV-KCLDCLGNSDLMHQYIMRTQQMPLY 627
+ + G + G+H N Y + + + K D M + I Q +
Sbjct: 549 RIAAEHGGEERFVSGLHAN-----YMVSLPIGVIRKASSWFLFYDDMQKIIHSLQNWSVQ 603
Query: 628 VYQPPLAITVHRLVSQIQKPNLEWPK----SYQRYRNAFMEKMDIFKSWHSKIPPYISRH 683
Y +++H ++ + ++ +P+ YQ+ + + D+ H R
Sbjct: 604 KYASSFFVSLHLSLATHARVSIAYPQLEQTIYQKSKESEETISDVRSCGH------FGRQ 657
Query: 684 LSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDP 743
LV D + ++ I PP ++P+ L + +E + Q VS M Y LTY T
Sbjct: 658 TQRNELVLDILPYIVKIAQPP-IKPMNESLYNQRELSIFNQTVSVMCDYGLTYTATMIKD 716
Query: 744 LLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLALAVKQVLVHEVEKQRI 798
+N L F P I+ F LA A +Q++ H++ R+
Sbjct: 717 QINWL------------FTPAIDVLTMFPLEEPKRPYLANATRQLIAHKITLTRV 759
>gi|358345617|ref|XP_003636872.1| Chromosome transmission fidelity protein-like protein [Medicago
truncatula]
gi|355502807|gb|AES84010.1| Chromosome transmission fidelity protein-like protein [Medicago
truncatula]
Length = 135
Score = 176 bits (445), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 88/115 (76%), Positives = 102/115 (88%), Gaps = 1/115 (0%)
Query: 341 EVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSA 400
EVNASDDRS+STIE KILDVVQMNSV++DS+PKCLV+DEIDGALGDGKGAVEV+LKM+SA
Sbjct: 9 EVNASDDRSTSTIEAKILDVVQMNSVLSDSKPKCLVVDEIDGALGDGKGAVEVLLKMISA 68
Query: 401 ERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAK 455
E+K + K+++ K Q E+ S KKG K ASL RPVICICNDLYAPALRSLRQ+AK
Sbjct: 69 EKKPDAGKQSLDK-GQMERKSSKKGRKTASLSRPVICICNDLYAPALRSLRQVAK 122
>gi|19111992|ref|NP_595200.1| RFC-like complex subunit Ctf18 [Schizosaccharomyces pombe 972h-]
gi|74698425|sp|Q9USQ1.1|CTF18_SCHPO RecName: Full=Chromosome transmission fidelity protein 18
gi|6522992|emb|CAB62096.1| RFC-like complex subunit Ctf18 [Schizosaccharomyces pombe]
Length = 960
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 148/547 (27%), Positives = 264/547 (48%), Gaps = 51/547 (9%)
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA 368
P++++++L G G GKTTLAHV A GY V+E+NASDDR++ T+ K+ + +S ++
Sbjct: 414 PDKRIMMLTGLAGAGKTTLAHVIAHQAGYKVLEINASDDRTAHTVHEKVSSAISNHSALS 473
Query: 369 DSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKK 428
S+P C+++DEIDG GD V +L ++ ++ K+ + + + KK K
Sbjct: 474 -SQPTCVIVDEIDG--GD-PAFVRALLSLLESDEKAT---------EYSQAGNSKKKKKF 520
Query: 429 ASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALT 488
L RP+ICICNDLY PALR LR A++ F P + +V RL+ IC NE++ S +LT
Sbjct: 521 KKLCRPIICICNDLYTPALRPLRPYAQIIYFRPPPQASLVGRLRTICRNENIAVDSRSLT 580
Query: 489 TLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTK 548
L + DIRSC+N+LQ L + ++ I +++ K S S + + +F + K
Sbjct: 581 LLTDIYNSDIRSCINSLQLLSLNNKRIDSETI--KLLQPKSNSFSTSSLIQSLFLQLDNK 638
Query: 549 RLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCL 608
++R ++ +S + D L + I D + + L L + D ++ K + L
Sbjct: 639 QIR-AIEASQPTYSHLDALLARIDGANDSESVLMNCFHTYLDLPFTDSLLSKPALTSEWL 697
Query: 609 GNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEW-PKSYQRYRNAFMEKMD 667
D +H + L+ Y P I H L + +K L P+S + + +
Sbjct: 698 YFFDQLHSQCYKG-NYELWRYIPYSIIHFHYLYATPEKCRLPHPPRSDLEALKLYRTRKE 756
Query: 668 IFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVS 727
I S+ S + Y ++ S++ + I +L I PTL+ + + + + ++
Sbjct: 757 ILDSFISTLNAYENQMHGERSILLELIRTIL-ITINPTLKQKEDSMPRSALPSKIEHAIN 815
Query: 728 AMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLALAVKQ 787
+ Y+L ++ P+ + GN V +PP++E + + S++ +V+Q
Sbjct: 816 ILNHYNLRFQQL---PVGD--GNYV------YRLEPPLDELV-WDAPTSSY-----SVRQ 858
Query: 788 VLVHEVEKQRIMQV-------------TIGKSEHLADGYKENMDLAGE--EDSKTESAKT 832
+L E+ K+R+ + + K + G D G + K+E+ +
Sbjct: 859 MLSQELLKKRLADIKKQTLTDNPTSSNSSRKRKDFNSGKAIKRDFFGRIISEPKSEAVTS 918
Query: 833 NNAAVSA 839
NNAA++
Sbjct: 919 NNAALNT 925
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 27/39 (69%)
Query: 196 EQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFG 234
++LWVD Y P F +LL DE+ +R + W+K WD CVFG
Sbjct: 350 QKLWVDTYRPQLFRDLLGDERVHRAAMHWIKAWDPCVFG 388
>gi|296083465|emb|CBI23423.3| unnamed protein product [Vitis vinifera]
Length = 374
Score = 172 bits (436), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 124/337 (36%), Positives = 175/337 (51%), Gaps = 48/337 (14%)
Query: 7 MHIPLPEELELLEAN---YQDLDPPEQDPDPPEPVPPD-----------SLPLEINGHKR 52
M+I LP+ELE LEAN +QDL+ E P + S P ++NG KR
Sbjct: 1 MYISLPKELEWLEANSHLHQDLEDYEDQEPPEPYPEEEEEQLPEPPSPLSQP-QVNGQKR 59
Query: 53 PRSDTPKSPIDVDEPQFDEKRSRIVDNDDEDWLRYSPPPPQARD-DARVEVEEKFVSRYA 111
P SD P +P + D + +EDWLRYS P D + V EE+ +SRYA
Sbjct: 60 PLSDGPDAPDSRKRSKADMSET----GAEEDWLRYSLPQDSDGDLEPMVVDEERIISRYA 115
Query: 112 SEIDGDCLPVTAPSGGDRVYVKISSSGVEERVKKLDVRAHSNSLTSEPIDVLLQKVEQEA 171
SEIDGDC+PVT P GGDRVY+KI ++G + R+KKLD+ + +S + V L + ++
Sbjct: 116 SEIDGDCIPVTGP-GGDRVYLKIRATGSDGRLKKLDLEGCTKGESSFVVAVWLPREWRK- 173
Query: 172 FNKALNSSSEGQSDRSLPEKPVVHEQ---LWVD--------KYAPNSFTELLSDEQTNRE 220
R+ P P+ + W D Y P + L + +
Sbjct: 174 --------------RTPPSTPIPNATPFISWGDMQTSPCLFAYGPPTLVSLCFHKGISFF 219
Query: 221 VLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFR 280
L++ W +F T+ S L RHS+I+Q+++ + SF RKN+G R S+GN R
Sbjct: 220 FLVFFFFWAMVLFSVLFVKTTCNN-SCLIRHSSIAQHQRPSGMSFLRKNKGQRLSDGNSR 278
Query: 281 NSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
SNNL+ EN N KG+Q+ W+KK++ TGPPEQKV C
Sbjct: 279 YSNNLDQENGNLKGLQELWNKKSKGTGPPEQKVCCFC 315
>gi|254585195|ref|XP_002498165.1| ZYRO0G03806p [Zygosaccharomyces rouxii]
gi|238941059|emb|CAR29232.1| ZYRO0G03806p [Zygosaccharomyces rouxii]
Length = 706
Score = 172 bits (435), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 139/471 (29%), Positives = 221/471 (46%), Gaps = 41/471 (8%)
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA 368
P +++LLL GPPG+GKT++AHV AK GY V E+NASD+R + +KIL+ + N
Sbjct: 162 PAKRILLLHGPPGIGKTSVAHVIAKQAGYTVAEINASDERGGWQVRDKILNTL-FNHTFN 220
Query: 369 DSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKK 428
S P CLV DEIDG L G ++V++ +V+++ ++ T K V K K K +
Sbjct: 221 QS-PVCLVADEIDGTLE--SGFIKVLIDVVNSDARA-TRKMGVPK--------KGKKNRD 268
Query: 429 ASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALT 488
LLRP+I +CN+LYAPAL L+ + ++ F +PS + RL IC E +K S +L
Sbjct: 269 KLLLRPIIAVCNNLYAPALEKLKPLCEIVPFKRPSDFSLNERLDTICRVEGVKIHSKSLK 328
Query: 489 TLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTK 548
L + ++ D+R+C+N LQF KD S S + + IFQ+ +
Sbjct: 329 DLIDLSQGDVRNCVNNLQFWATGTSSQASSSSMDTDPMGKDFSSSWYGLVNSIFQRDPHR 388
Query: 549 RLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCL 608
R+ +SS L I G+YD I G H +++Y D ++K + D L
Sbjct: 389 ESRDQLSS----------LSQQIELNGNYDRIVQGCHSIFPRVKYSDNGVIKPSRIADWL 438
Query: 609 GNSDLMHQYIMR-TQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKS---YQRYRNAFME 664
DLM++ + + ++ Y PL H K +++ S + R M+
Sbjct: 439 YFHDLMNKSLYQHNGELMRYCAAVPLQFA-HMFGDIANKEDIQVKNSQYEFNELRKFTMD 497
Query: 665 KMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQ 724
+ K P + S +SL+ +++ L ++S + L + A N LA+
Sbjct: 498 ITNCIAHQTLKRSPAVQTFTSRQSLIFETLPYLDSMISADVSKCKNLKVKQAIYDN-LAE 556
Query: 725 LVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYR 775
L++ Y L D L LS DPP+++ + R
Sbjct: 557 LLNF---YQLNVVARNHDSL---------EGKKILSIDPPLDQIVLLDNKR 595
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 19/116 (16%)
Query: 127 GDRVYVKISSSGVEERVKKL---DVRAHSNSLTSEP------IDVLLQKVEQEAFNKALN 177
GDR +V S SG R++K V + SL E I+ LL K+E E+ A N
Sbjct: 38 GDREFV--SGSGKVVRLRKRVNSSVENYGGSLWREDETYGININALLDKIESES---ASN 92
Query: 178 SSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVF 233
+ + +L + +LWV+K+ P F +L+ +E+TNR VL WL+QW VF
Sbjct: 93 GHHQDEKASNLHDN-----ELWVEKWRPRRFIDLVGNEKTNRRVLRWLRQWSPAVF 143
>gi|367008610|ref|XP_003678806.1| hypothetical protein TDEL_0A02630 [Torulaspora delbrueckii]
gi|359746463|emb|CCE89595.1| hypothetical protein TDEL_0A02630 [Torulaspora delbrueckii]
Length = 756
Score = 169 bits (429), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 124/454 (27%), Positives = 208/454 (45%), Gaps = 99/454 (21%)
Query: 197 QLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQ 256
+LWV+K+ P +F +L+ +E+TNR VL W++QW CVF ++
Sbjct: 146 ELWVEKWCPRNFLDLVGNEKTNRRVLRWIRQWSPCVFDEQLPEV---------------- 189
Query: 257 NKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRST----GPPEQK 312
Y N + D + T+ GPP
Sbjct: 190 ------------------------------YGQRNETEVLDPLLRPTKKILLIHGPP--- 216
Query: 313 VLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRP 372
G+GKT++AHVAAK GY V E+NASD+R+ + + +K+ + + ++ + RP
Sbjct: 217 --------GIGKTSVAHVAAKQAGYSVAEINASDERAGTLVRDKVHNTLFNHTF--NERP 266
Query: 373 KCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKAS-- 430
CLV DEIDG++ G ++++ +++ + ++ T + + P S+ K +K++
Sbjct: 267 VCLVADEIDGSIES--GFIKILTDLINKDAQA-TQRRMLG----PNMKSRTKKQRKSAKL 319
Query: 431 LLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTL 490
LLRP+I ICN+LYAPAL L+ ++ F +PS S ++ RL+HIC E +K L L
Sbjct: 320 LLRPIIAICNNLYAPALEKLKPHCEIIAFKRPSDSSLLERLEHICKVEGLKVPVKFLKEL 379
Query: 491 AEYTECDIRSCLNTLQFL--------DKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIF 542
+ + D+R+C+ LQF+ D K L+ + KD S+S F I ++F
Sbjct: 380 MDVAQGDVRNCVTNLQFIASHQKPNQDPKSNPLDSIS--------KDFSQSWFRICNQVF 431
Query: 543 QKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTV 602
++ + L + + + G+Y+ I G H ++Y D + K
Sbjct: 432 RRDPRRELTAQLREKTRQ----------VELNGNYERIVQGCHSLYPNVKYSDNGIQKPA 481
Query: 603 KCLDCLGNSDLMHQYIM-RTQQMPLYVYQPPLAI 635
D L DLM + + ++ Y PLA
Sbjct: 482 TIADWLFFHDLMFKSLFEHNGELLRYSSVVPLAF 515
>gi|45185248|ref|NP_982965.1| ABR019Cp [Ashbya gossypii ATCC 10895]
gi|44980906|gb|AAS50789.1| ABR019Cp [Ashbya gossypii ATCC 10895]
gi|374106168|gb|AEY95078.1| FABR019Cp [Ashbya gossypii FDAG1]
Length = 730
Score = 169 bits (428), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 162/658 (24%), Positives = 284/658 (43%), Gaps = 115/658 (17%)
Query: 160 IDVLLQKVEQEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNR 219
I+ LL ++E ++EG + R+ V + LW +K+ P F +L+ +E NR
Sbjct: 91 INALLDRIE---------GAAEG-AQRAARAPGRVPQALWAEKWRPQRFVDLVGNESNNR 140
Query: 220 EVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNF 279
+V+ WL+QW + VFG AL ++ + +Q + R
Sbjct: 141 KVMRWLRQWSALVFGE-----------ALPGRASANAAAEQPEDPLQR------------ 177
Query: 280 RNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHV 339
P++++LLL GPPG+GKT++AHV A+ GY V
Sbjct: 178 -----------------------------PQKRILLLHGPPGIGKTSVAHVLARQAGYAV 208
Query: 340 VEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVS 399
+E+NASD+R + + K+ + + ++ +S+P CLV DEIDG+ + G + ++ +V+
Sbjct: 209 MELNASDERGGTRLREKVRNCLFNDTF--NSQPVCLVADEIDGSAEN--GLIRTLVDIVN 264
Query: 400 AERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVF 459
A+ ++ + E + + + ++ + L+RP++ ICN++YA AL LR ++ F
Sbjct: 265 ADARATS--ELLGRLEHGKRKRARHKYSGKVLVRPIVAICNNVYARALEDLRPHCQIVAF 322
Query: 460 IQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMD 519
P ++ RL+ +C E + L +AE ++ DIR+ LN LQF ++V D
Sbjct: 323 RPPGELALLERLELVCEKEGVPADKKTLKQMAELSQGDIRNALNNLQF-------MSVTD 375
Query: 520 -IGSQVVG-RKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDY 577
GS G RKD F + ++F RN+ + S +F L S + Y
Sbjct: 376 GTGSPASGRRKDTGVPWFKLCNKLF--------RNNPHAESRA--QFQELLSEVELSSSY 425
Query: 578 DVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITV 637
+ + DG + +++ D + K D L D M + L Y P +
Sbjct: 426 EKVADGCFQLYPAVKFSDMRLQKPGAISDWLYFFDRMSASLYE-HNGELLRYCPMAIMEF 484
Query: 638 HRLVSQIQKPNLEWPKSYQ-RYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISP 696
L S I + KS + R + + + P STE+L+ +++ P
Sbjct: 485 FVLFSDIANRQDQVIKSMEYEVREKGRRHSAMVAATRKGMHPDSQIFTSTEALLLETL-P 543
Query: 697 LLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDV 756
L I+ P L + L K +++ PLL+ G ++ H
Sbjct: 544 YLDIMLSPDLTAIHDQLTRQKIMDNIV-------------------PLLHQFGLQLHHIK 584
Query: 757 ST-----LSFDPPINEFITFKGYRSNHYVLALA-VKQVLVHEVEKQRIMQVTIGKSEH 808
T L+ PP NE + RS V +L+ ++E+++ + T+ K H
Sbjct: 585 DTDYRNLLAIQPPFNELVALDPKRSRETASKRPHVLNILLAKLEEEKAKKRTVRKVRH 642
>gi|119606115|gb|EAW85709.1| CTF18, chromosome transmission fidelity factor 18 homolog (S.
cerevisiae), isoform CRA_f [Homo sapiens]
Length = 493
Score = 169 bits (427), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 103/327 (31%), Positives = 164/327 (50%), Gaps = 18/327 (5%)
Query: 432 LRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLA 491
+RP+ICICND +AP+LR L+Q A + F SR+V RL+ + + M+ L L
Sbjct: 1 MRPIICICNDQFAPSLRQLKQQAFLLHFPPTLPSRLVQRLQEVSLRQGMRADPGVLAALC 60
Query: 492 EYTECDIRSCLNTLQFL-DKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRL 550
E T+ DIR+C+NTLQFL + + L+V D+ + VG KD R F +W+E+FQ + +R
Sbjct: 61 EKTDNDIRACINTLQFLYSRGQRELSVRDVQATRVGLKDQRRGLFSVWQEVFQLPRAQRR 120
Query: 551 R----------------NSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYH 594
R S ++ S F + ++ G+++ + G+ +N L+L+
Sbjct: 121 RVGQDPALPADTLLLGDGDAGSLTSASQRFYRVLHAAASAGEHEKVVQGLFDNFLRLRLR 180
Query: 595 DPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKS 654
D + LD L DL+ +Q L Y P L + H L + P + +P S
Sbjct: 181 DSSLGAVCVALDWLAFDDLLAGAAHHSQSFQLLRYPPFLPVAFHVLFASSHTPRITFPSS 240
Query: 655 YQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLL 714
Q +N + ++ ++ S I P +R +T + LL + P LRPV+ L
Sbjct: 241 QQEAQNRMSQMRNLIQTLVSGIAP-ATRSRATPQALLLDALCLLLDILAPKLRPVSTQLY 299
Query: 715 SAKEKNDLAQLVSAMVSYSLTYKNTKS 741
S +EK LA LV M++YSLTY+ ++
Sbjct: 300 STREKQQLASLVGTMLAYSLTYRQERT 326
>gi|195148000|ref|XP_002014962.1| GL19453 [Drosophila persimilis]
gi|194106915|gb|EDW28958.1| GL19453 [Drosophila persimilis]
Length = 756
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/342 (34%), Positives = 172/342 (50%), Gaps = 37/342 (10%)
Query: 128 DRVYVKISSSGVEERVKKLDVRAHSNSLTSEPIDVLLQKVEQEAFNKALNS-SSEGQSDR 186
+R+YV+ S E+R +LD+ + ++ + +KV QEA L + + Q
Sbjct: 247 ERIYVRFHSEEYEKR--QLDLISARGAVVGSLLGDAKEKVWQEANELVLRRLAPDTQPAI 304
Query: 187 SLPEKPVVHE-QLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVL 245
+ P V +LWVDKY P + +LLSDE TNR +L WLK WD VFG S E+
Sbjct: 305 AAPSTAVPETGRLWVDKYKPRKYIDLLSDEMTNRSLLYWLKMWDKVVFGKPFHSKQEQEA 364
Query: 246 SALRRHSTISQNKKQND--SSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKT 303
+ N +SF ++ G SNG +R + N+N +
Sbjct: 365 VTGGGPTGGGGGGGANTQLNSFNKRT-GKFESNGGWRQRKARQALNTNVDAM-------- 415
Query: 304 RSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQM 363
G P QKV LLCGPPGLGKTTLAH A+H GY+V E+NASDDRS + + + QM
Sbjct: 416 ---GRPMQKVALLCGPPGLGKTTLAHTIARHAGYNVREINASDDRSPEAFKLALENGTQM 472
Query: 364 NSVM-ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISK 422
+SV+ AD RP C+V+DEIDGA + ++E ++K V+ + S AK AK Q +
Sbjct: 473 SSVLNADKRPNCIVLDEIDGA---PRQSIEYLVKFVNDDVHSK-AKAKGAKFTQKSTTQR 528
Query: 423 ------KKGCKKAS--------LLRPVICICNDLYAPALRSL 450
+KG ++ LL + + + +P LRS+
Sbjct: 529 NIFQALRKGVTPSAVGVGHGRILLLDTVPMLKRILSPQLRSV 570
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 106/283 (37%), Gaps = 58/283 (20%)
Query: 667 DIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLV 726
+IF++ + P L+ D++ L ILSP LR V + LLS KE DL +
Sbjct: 529 NIFQALRKGVTPSAVGVGHGRILLLDTVPMLKRILSP-QLRSVTVKLLSPKELQDLNHTI 587
Query: 727 SAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLALAVK 786
M+ +T+ KS H V +P ++ I F G+ ++ +
Sbjct: 588 EVMLDLGVTFVQVKSLE---------GHYV--FQPEPDLDALIAFPGFPG--LTVSYFGR 634
Query: 787 QVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTNNAAVSAKLIEKSK 846
Q+L EV RI + A ++ + + +A A +
Sbjct: 635 QLLAREVALARIRR-------------------AAPKEGEPSAVAAASAKKQAAKTAATS 675
Query: 847 SLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDRFRKLSGKVSQ 906
LP Q T KP S+ + + S D F G+++
Sbjct: 676 HLPNHLQ------------------TLKPKPISASNVRSSAPKQQLTKDFF----GRITH 713
Query: 907 DNDNAVQKATVERDSL---PLLFKFNEGFTNAVKRPVRMRDFL 946
A Q + D++ P+ +++ EGF NAV++ V + + L
Sbjct: 714 KTSTAKQIDEAKTDAIVKSPIWYRYKEGFNNAVRKDVHLHELL 756
>gi|341903846|gb|EGT59781.1| hypothetical protein CAEBREN_22739 [Caenorhabditis brenneri]
Length = 822
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 145/580 (25%), Positives = 246/580 (42%), Gaps = 95/580 (16%)
Query: 166 KVEQEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWL 225
K ++E F++ L+ S D S + V LWV+KY +F++LLSD NR +L WL
Sbjct: 230 KRQEEEFSRMLDDDSSA-FDTSTSKH--VESALWVNKYEAKNFSDLLSDSTVNRNILTWL 286
Query: 226 KQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNL 285
K WD CVF +I +++L +L R+ + NG R
Sbjct: 287 KMWDECVFRKKI----DDLLGSLG----------------DREREVLQMDNGKIRR---- 322
Query: 286 EYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNAS 345
P K+LL+ GP GLGK+TLA + A+ GY ++VNAS
Sbjct: 323 -----------------------PALKMLLISGPAGLGKSTLARIVARQAGYSTIDVNAS 359
Query: 346 DDRSSSTIENKILD--VVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERK 403
D R+ + + NK+L+ V ++ AD RP CL++DEIDG ++ I ++ +
Sbjct: 360 DARTVADL-NKVLEGAVKTSRTLDADQRPACLILDEIDGT------PIDTIRHLIRCLQA 412
Query: 404 SNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPS 463
+ K ++ RP+I ICN+L+ PALR LR +A
Sbjct: 413 NG----------------------KKAVRRPIIGICNNLFTPALRDLRSVAWCVQLGATK 450
Query: 464 VSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLD----KKKEILNVMD 519
+ RL+ IC++E ++ L L + D+R +NTLQ++ K + + +
Sbjct: 451 QDALAKRLEEICDHECLRCDLSTLRKLCDLCGNDMRHSINTLQWVAIAARKSNKTIGMKL 510
Query: 520 IGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDV 579
I + K + S FD W + + K ++ + + V + + + G D
Sbjct: 511 IHEVIQKEKGGATSIFDDWSAVLELTKHADVKGGIKA---VRERVLAIEKISAEHGGEDR 567
Query: 580 IFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHR 639
G+H N L P+ + + D + + I Q + Y + +++H
Sbjct: 568 FVSGLHANYL---VSLPIGV-IRRASTWFSFYDDIQKTIHTYQNWSVQKYMFSVFVSLHL 623
Query: 640 LVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLH 699
++ + +++P Q E + + S + R + L+ D + ++
Sbjct: 624 NIATHARVPIQYPHLEQTMFQKMKESEETINAVRS--CGHSGRGAPKKELLLDVLPFIVG 681
Query: 700 ILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNT 739
I+ PP ++P+ L +E Q VS M Y LTY T
Sbjct: 682 IVQPP-IKPMNESLYDQRELATFNQTVSIMCDYGLTYTAT 720
>gi|303290364|ref|XP_003064469.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454067|gb|EEH51374.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 277
Score = 165 bits (417), Expect = 1e-37, Method: Composition-based stats.
Identities = 112/287 (39%), Positives = 146/287 (50%), Gaps = 56/287 (19%)
Query: 197 QLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQ 256
+LWVD +AP FTELLS EQT + EVL L+ I
Sbjct: 31 KLWVDAHAPKLFTELLSPEQT-----------------------NREVLHWLKAWDGIVF 67
Query: 257 NKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLL 316
+ + + G F L+ E G P K+LLL
Sbjct: 68 KRAPPKPYKKEYKKKDA---GAFNTHVPLDEE------------------GRPVHKILLL 106
Query: 317 CGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMAD----SRP 372
G PG+GKTTLAHVAAKH GY VVE+NASDDR++ T++ ++ D QM SV+ ++P
Sbjct: 107 SGAPGVGKTTLAHVAAKHAGYRVVEINASDDRNAETLKRRVTDACQMRSVVGGGAGANKP 166
Query: 373 KCLVIDEIDGALG--DGKGAVEVILKMVSAERKSNTAKENVAKED--QPEKISKKKGCKK 428
C+VIDEIDGALG +GKGA+ +L++ + E A+E K D KK
Sbjct: 167 NCVVIDEIDGALGGAEGKGAIHALLQINADE----DAREEAGKRDKSSSGSGGSKKKKGP 222
Query: 429 ASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHIC 475
L RP+I ICNDLYAPALR LR+IAKV + S + SRL+ +C
Sbjct: 223 GPLNRPIIAICNDLYAPALRPLREIAKVFRVGAANKSAIASRLRRVC 269
>gi|281200952|gb|EFA75166.1| AAA ATPase domain-containing protein [Polysphondylium pallidum
PN500]
Length = 446
Score = 164 bits (414), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 119/369 (32%), Positives = 184/369 (49%), Gaps = 46/369 (12%)
Query: 117 DCLPVTAPSGGDRVYVKISSSG------VEERVK-KLDVRAHSNSLTSEPIDVLLQKVEQ 169
D + +T+ SG +R+Y ++ EE V+ ++++ SL + I L ++ +
Sbjct: 78 DEITITSFSG-ERIYNRLKKDEEELDYYSEESVRNRINLSRIGGSLLGKSISELDTEISE 136
Query: 170 EAFNKALNSSSEG-----QSDRSLPEKP--VVHEQLWVDKYAPNSFTELLSDEQTNREVL 222
KAL ++S +L K + +LWVDKYAP+SF ELLSD++ N+++L
Sbjct: 137 HQITKALKANSAATITYNNKTTTLTNKGNKKIDNRLWVDKYAPDSFHELLSDDKLNKDIL 196
Query: 223 LWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNS 282
LWLK WD VFG +I S+S S +ST + + +++ KN+ + N F+
Sbjct: 197 LWLKHWDYSVFGKQINSSSSSSGSGNGNNSTTTTSSGSDNN----KNQA-QVVNWKFQKK 251
Query: 283 NNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEV 342
+ +Q + + G P K++LL G PGLGKTTLAH+ AK GY+ +E+
Sbjct: 252 TTTTGAAPSKAIVQQHNNGALDAAGQPNHKIILLTGGPGLGKTTLAHILAKQAGYNPIEI 311
Query: 343 NASDDRSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAER 402
NAS +RS E K L ++M SV A+ +P CL+IDEIDG G G VE+ILK+++ +
Sbjct: 312 NASFERSGEKFETKFLAALEMQSVFANQKPTCLIIDEIDGISGGDNGPVELILKLIANSK 371
Query: 403 KSNTAKENVAKE------------------DQPEKISKKKGCKKAS--------LLRPVI 436
K N+ ++ D +S K + RP+I
Sbjct: 372 KLNSQASKTDRDIGSGSNDVDMDDDMMDEFDNGGSVSAKPKKSGKGKKPQLLPKINRPII 431
Query: 437 CICNDLYAP 445
CICND P
Sbjct: 432 CICNDHQRP 440
>gi|407838271|gb|EKG00011.1| hypothetical protein TCSYLVIO_009065 [Trypanosoma cruzi]
Length = 1008
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 135/455 (29%), Positives = 194/455 (42%), Gaps = 130/455 (28%)
Query: 143 VKKLDVRAHSNSLTSEPIDVLLQKVEQEAFN-------KALNSSSEGQSDRSLPEKPVVH 195
V++L R + L I LLQ + EA N + R +
Sbjct: 148 VRELRRRHGGSGLGHVNIPALLQGLYDEAANGDESRVMPPTTPTPFPPEQRGTKRRGRDE 207
Query: 196 EQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTIS 255
E LWV KY+P F ELLSD+ TN ++L WLK WD+ +F
Sbjct: 208 EALWVMKYSPKHFRELLSDDNTNLKLLQWLKSWDAYIF---------------------- 245
Query: 256 QNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLL 315
D+ TR + GN N + + N+ + +K+T + PE+++ +
Sbjct: 246 -----QDTPATR-------NTGNNDNVSAISTNNTTAAA-----NKETSAPTRPEERLAV 288
Query: 316 LCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKI------------------ 357
L GPPG+GKTTLAHV A HCGY VE+NAS DR+SS +E I
Sbjct: 289 LVGPPGVGKTTLAHVLAAHCGYETVEINASVDRTSSAMERAIQLAVSPARGRRRALPLSS 348
Query: 358 -----------------LDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSA 400
V ++ V RPKCL+IDE+DG ++A
Sbjct: 349 LSASSSNVDGASKATLKAGVAGVSLVDMLLRPKCLIIDEMDG---------------IAA 393
Query: 401 ERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFI 460
NVA + I C PV C+CND Y P+LRSLR+ HV+
Sbjct: 394 ---------NVAAFLLQQDIH----C-------PVFCLCNDFYVPSLRSLRRQCH-HVYY 432
Query: 461 QPSV--SRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFL-------DKK 511
P + R++SRL I E + S L L + + D+R CLNTLQFL +
Sbjct: 433 FPPIRPQRLLSRLSEIAELEGLSVSKPVLADLVQSSNGDVRCCLNTLQFLCCHTSPTGGE 492
Query: 512 KEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRK 546
++ L +M ++ G KD +D W+ F++++
Sbjct: 493 RDPLQLM---REMQG-KDSKLGLWDTWRLFFERQE 523
>gi|297735911|emb|CBI18687.3| unnamed protein product [Vitis vinifera]
Length = 227
Score = 163 bits (413), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 96/227 (42%), Positives = 130/227 (57%), Gaps = 39/227 (17%)
Query: 103 EEKFVSRYASEIDGDCLPVTAPSGGDRVYVKISSSGVEERVKKLDVRAHSNSLTSEPIDV 162
EE+ VSRYASEIDGDC+PVT P GGDRVY+KIS++G + R+KKLD+ + L EPI V
Sbjct: 5 EERIVSRYASEIDGDCIPVTGP-GGDRVYLKISATGSDGRLKKLDLEGRTKGLILEPISV 63
Query: 163 LLQKVEQEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNS--------------- 207
L+Q+VEQ+AF K + S V+ L+V NS
Sbjct: 64 LMQRVEQDAFTKVYHFFSWFFFFFW---ALVLFSVLFVKTTCNNSCLIFPNWSPLLQNIN 120
Query: 208 -FTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFT 266
F SD+ E+LL++ + +RRHS+I+Q+++ + SF
Sbjct: 121 LFLFFCSDQI--HELLLFI-----------------SLFQKIRRHSSIAQHQRPSGMSFL 161
Query: 267 RKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKV 313
RKN+G R S+GN R SNNL+ EN N KG+Q+ W+KK+R T PPEQKV
Sbjct: 162 RKNKGQRLSDGNSRYSNNLDQENGNLKGLQELWNKKSRGTSPPEQKV 208
>gi|145355690|ref|XP_001422085.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582325|gb|ABP00402.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 235
Score = 161 bits (407), Expect = 2e-36, Method: Composition-based stats.
Identities = 100/283 (35%), Positives = 139/283 (49%), Gaps = 56/283 (19%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LW ++AP +FT+LLS E NREV+ W+K WD VF + + A R++ +
Sbjct: 5 LWAQRHAPRAFTDLLSVEHVNREVVHWIKGWDKVVFDRNPPPATMKKFYA-DRYAEKAGL 63
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
KK++ ++ T H + P +K+LLL
Sbjct: 64 KKRSGTTET---------------------------------HVQLDRKQRPMEKILLLS 90
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVI 377
GPPG GKTTLAHVAAKHCGY +E+NASDDRS+ST++ K+ D +Q S +PKC++I
Sbjct: 91 GPPGAGKTTLAHVAAKHCGYETIEINASDDRSASTLKLKLADALQTRSAFEKQKPKCVII 150
Query: 378 DEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVIC 437
DEIDG N A + KG +A L RP+I
Sbjct: 151 DEIDGV--------------------HNGGGGGGAIWTVMHALKDVKG--QAPLCRPIIA 188
Query: 438 ICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
ICNDLYA LR LR +AK+ P S + +R++ C E++
Sbjct: 189 ICNDLYAQVLRPLRDVAKIIRMKPPQTSHLTARIRDACLKENV 231
>gi|296420729|ref|XP_002839921.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636128|emb|CAZ84112.1| unnamed protein product [Tuber melanosporum]
Length = 779
Score = 160 bits (406), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 112/335 (33%), Positives = 161/335 (48%), Gaps = 95/335 (28%)
Query: 188 LPEKPVVHEQ---LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEV 244
+PE P + Q LW +KY FT+L+ DE+T+R+VL W K WD VF S
Sbjct: 56 MPEDPNIGSQKTLLWTEKYRAKRFTDLVGDERTHRQVLRWFKSWDKIVFPSV-------- 107
Query: 245 LSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTR 304
+ + N+ +N+ RK
Sbjct: 108 ------ANRLVNNRDENEGRELRK------------------------------------ 125
Query: 305 STGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVV--- 361
+LL+ GPPGLGKTTLAHVAAK GY VVEVNASD+RS+ ++ +I D++
Sbjct: 126 --------ILLIHGPPGLGKTTLAHVAAKQAGYDVVEVNASDERSAGVVKGRIKDILSNE 177
Query: 362 -------------QMNSVMADSRPKCLVIDEIDGALGDGKGA------VEVILKMVSAER 402
Q +S + +P CLV+DEIDG G G ++ ++ +V A++
Sbjct: 178 GVKTMGAITNGAKQKSSRVTMGKPVCLVVDEIDGVTGGGGAGANEGGFIKALIDLVLADQ 237
Query: 403 KSNTAKENVAKEDQPEKISKKKGCKKA---SLLRPVICICNDLYAPALRSLRQIAKVHVF 459
K N N+A E +KKKG +K L RP++ +CNDLYAPAL++LR +A++
Sbjct: 238 KLN----NIA-----EGATKKKGRRKGDSFKLQRPIVAVCNDLYAPALKALRPLAEIVHM 288
Query: 460 IQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYT 494
+P V +V RLK I E +T A+ L E +
Sbjct: 289 RKPPVGPMVGRLKSILEYEGFRTEDGAVRRLVELS 323
>gi|340055027|emb|CCC49335.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 1007
Score = 156 bits (395), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 185/763 (24%), Positives = 284/763 (37%), Gaps = 220/763 (28%)
Query: 161 DVLLQKVEQEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNRE 220
+ LL + QEA + NSS+ S +K E LWV KY P F ELLSD+ TN +
Sbjct: 159 ETLLNEAAQEAVDSTGNSSTLPCSRPDAGDKSR-EELLWVVKYTPKRFHELLSDDSTNLK 217
Query: 221 VLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFR 280
+L W+K W FR
Sbjct: 218 LLRWMKS----------------------------------------------WDAYVFR 231
Query: 281 NSNNLEYENSNSKGIQDSWHKKTRSTGP----PEQKVLLLCGPPGLGKTTLAHVAAKHCG 336
N E + S+GP P+ ++ +L GPPG+GKTTLAHV A HCG
Sbjct: 232 NDAATPAEAA-----------LMESSGPSPARPDDRLAILVGPPGVGKTTLAHVLASHCG 280
Query: 337 YHVVEVNASDDRSSSTIENKILDVV------------------QMNSVMADSR------- 371
Y +E+NAS DR++S IE+ I V + S + ++
Sbjct: 281 YETIEINASVDRTTSRIESMIQLAVAPCRGRHRVPGPSNPSGGKGTSTLREATQGGASSV 340
Query: 372 --------PKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKK 423
PKCL+IDE+DG + GA + K+D
Sbjct: 341 SLLDSLLTPKCLIIDEMDG-IASNVGAF-------------------LLKQD-------- 372
Query: 424 KGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQP-SVSRVVSRLKHICNNESMKT 482
+ PVIC+CND Y PALR LRQ + + + P R+++RL I E+++
Sbjct: 373 -------IHCPVICLCNDYYVPALRPLRQQCRFVLHVPPIRPQRLLARLSEIAERENIRA 425
Query: 483 SSIALTTLAEYTECDIRSCLNTLQFL------------DKKKEILNVMDIGSQVVGRKDM 530
SS+AL L + D+R CLNT+QF ++ E+L M KD
Sbjct: 426 SSVALAELVRASNGDVRCCLNTMQFAYQAVDASVASSPKQQHELLRKMY-------GKDS 478
Query: 531 SRSAFDIWKEIFQKRKTKR----LRNS--------------------------------- 553
S +D W+ +F++++ + LR
Sbjct: 479 KLSLWDSWRVVFERQERGKYVQLLRKEFLIDYDAAVMEGCSQLLHGVDDQKPKDPDGSGT 538
Query: 554 --------------VSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVML 599
V++ V + + ++ G+ + +G+ E L+ Y D +
Sbjct: 539 QIPTEHRAGEAKVRVAAGFRVDPGYIYTSHVLLQCGETGAMLEGLQEFYLKRPYTDYSLR 598
Query: 600 KTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRY- 658
T D D + R + +V Q ++T R + +
Sbjct: 599 HTHVVADAFAFHDCLTSAAYRHPSLLPFVDQYAQSVTATRCFCCCSSASRSGGSVIGGFP 658
Query: 659 RNAF------MEKMDIFKSWHSKI-PPYISRHLSTESLVEDSISPLLHILSPPTL----R 707
R F ME I +S P IS HL T V D I LL L ++ R
Sbjct: 659 REGFCANRRKMESTHIVRSLRDGCRVPEISAHLYTADAVNDFIPLLLRCLCDVSVRLPSR 718
Query: 708 PVA-LHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPIN 766
P+A + L+ ++ L++ V+ +Y L+Y T L G E +V PPI+
Sbjct: 719 PIASIAALNKRDHQLLSESVARHATYGLSYALTTRG--LFYSGEESEDEVERWDLTPPIH 776
Query: 767 E--FITFKGYRSNHYV--LALAVKQVLVHEVEKQRIMQVTIGK 805
++ R+ H L+ VL + E +++M IG+
Sbjct: 777 RTCCVSRSASRAQHEPGHWELSPVMVLSMKAEMKQLMVGEIGR 819
>gi|365989440|ref|XP_003671550.1| hypothetical protein NDAI_0H01330 [Naumovozyma dairenensis CBS 421]
gi|343770323|emb|CCD26307.1| hypothetical protein NDAI_0H01330 [Naumovozyma dairenensis CBS 421]
Length = 793
Score = 156 bits (394), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 135/469 (28%), Positives = 217/469 (46%), Gaps = 78/469 (16%)
Query: 160 IDVLLQKVEQEAFN-KALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTN 218
I+ LL ++E ++ + + +N S+ + +S +E LWV+K+ P SF +L+ +E+TN
Sbjct: 118 INALLDRIESKSSDSRQINKSTSKRKRKS------KNETLWVEKWRPKSFLDLVGNEKTN 171
Query: 219 REVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGN 278
R +L WL++W VF ++ L + T
Sbjct: 172 RRILGWLRKWAPAVFKEQLPQ-----LPGIFGQDT------------------------- 201
Query: 279 FRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYH 338
SNN N ++ K GPP G+GKT++AHV AK G+
Sbjct: 202 ---SNNTPEINIEVDPLERPMKKILLIHGPP-----------GIGKTSVAHVLAKQAGFT 247
Query: 339 VVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMV 398
V E+NASD+R+ + +KI++ + N D +P CLV DEIDG++ G + V++ ++
Sbjct: 248 VSEINASDERAGPLVRDKIMNTL-FNHTFND-KPVCLVADEIDGSI--ESGFIRVLIDII 303
Query: 399 SAERKSN-TAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVH 457
+ + K+ K N + KK K++ LLRP+I +CN+LYAPAL L+ ++
Sbjct: 304 NNDAKATRNLKFNTTSKFIQRTKGKKNKKKQSLLLRPIIAVCNNLYAPALEKLKPHCEII 363
Query: 458 VFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLD-------- 509
F +PS + RL+ I E + S+ L L + E D+R+C+N LQFL
Sbjct: 364 SFKRPSDKSLQERLETISMKEHLDISTKELIDLMDLAEGDVRNCINNLQFLSSHSRYKAK 423
Query: 510 KKKEILNVMDIGSQ----VVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFD 565
+ E + D S+ KD + S F + EIF+K + +++ S +
Sbjct: 424 QTSETADGFDSKSKNKTWESANKDHAVSWFRMVNEIFKKDPHRDIKSQFS---------E 474
Query: 566 FLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLM 614
LH + N G+YD I G ++Y D M K D L D M
Sbjct: 475 ILHQIEQN-GNYDRIAQGCFSLYPFVKYSDNGMKKPNHISDWLYFHDRM 522
>gi|71423150|ref|XP_812358.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70877131|gb|EAN90507.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 1008
Score = 155 bits (393), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 125/395 (31%), Positives = 175/395 (44%), Gaps = 123/395 (31%)
Query: 196 EQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTIS 255
E LWV KY+P F ELLSD+ TN ++L WLK WD+ +F
Sbjct: 208 EALWVMKYSPKHFRELLSDDNTNLKLLQWLKSWDAYIF---------------------- 245
Query: 256 QNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLL 315
D+ TR N+GN G +N N+ + TR PE+++ +
Sbjct: 246 -----QDTPATR-NKGNNDDVGAIATNNTTAAANNETSA-------PTR----PEERLAV 288
Query: 316 LCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKI------------------ 357
L GPPG+GKTTLAHV A HCGY VE+NAS DR+SS +E I
Sbjct: 289 LVGPPGVGKTTLAHVLAAHCGYETVEINASVDRTSSAMERAIQLAVSPARGRRRALPLSS 348
Query: 358 ---------------LDVVQMNSVMADS--RPKCLVIDEIDGALGDGKGAVEVILKMVSA 400
L + + D RPKCL+IDE+DG ++A
Sbjct: 349 LSTSSSNVDGASKATLKTREAGVSLVDMLLRPKCLIIDEMDG---------------IAA 393
Query: 401 ERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFI 460
NVA + I C PV C+CND Y P+LRSLR+ HV+
Sbjct: 394 ---------NVAAFLLQQDIH----C-------PVFCLCNDFYVPSLRSLRRQCH-HVYY 432
Query: 461 QPSV--SRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDK-------K 511
P + R++SRL I E + S L L + + D+R CLNTLQFL + +
Sbjct: 433 FPPIRPQRLLSRLTEIAELEGLSVSKPVLADLVQSSNGDVRCCLNTLQFLCRHTSPTGGE 492
Query: 512 KEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRK 546
++ L +M ++ G KD +D W+ F++++
Sbjct: 493 RDPLQLM---REMQG-KDSKLGLWDTWRLFFERQE 523
>gi|71667136|ref|XP_820520.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70885868|gb|EAN98669.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 1008
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 122/395 (30%), Positives = 174/395 (44%), Gaps = 123/395 (31%)
Query: 196 EQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTIS 255
E LWV KY+P F ELLSD+ TN +L WLK WD+ +F
Sbjct: 208 EALWVMKYSPKHFRELLSDDNTNLRLLQWLKSWDAYIF---------------------- 245
Query: 256 QNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLL 315
D+ TR + GN N + + N+ + + T + PE+++ +
Sbjct: 246 -----QDTPATR-------NTGNNDNVSAISTNNTTAAANNE-----TSAPTRPEERLAV 288
Query: 316 LCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKI------------------ 357
L GPPG+GKTTLAHV A HCGY VE+NAS DR+SS +E I
Sbjct: 289 LVGPPGVGKTTLAHVLAAHCGYETVEINASVDRTSSAMERAIQLAVSPARGRRRALPLSS 348
Query: 358 -----------------LDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSA 400
V ++ V RPKCL+IDE+DG ++A
Sbjct: 349 LSTSSSNVDGASKATLKTGVAGVSLVDMLLRPKCLIIDEMDG---------------IAA 393
Query: 401 ERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFI 460
NVA + I C PV C+CND Y P+LRSLR+ HV+
Sbjct: 394 ---------NVAAFLLQQDIH----C-------PVFCLCNDFYVPSLRSLRRQCH-HVYY 432
Query: 461 QPSV--SRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDK-------K 511
P + R++SRL I E + S L L + + D+R CLNTLQFL + +
Sbjct: 433 FPPIRPQRLLSRLSEIAELEGLSVSKPVLADLVQSSNGDVRCCLNTLQFLCRHTSPTGGE 492
Query: 512 KEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRK 546
++ L +M ++ G KD +D W+ F++++
Sbjct: 493 RDPLQLM---REMQG-KDSKLGLWDTWRLFFERQE 523
>gi|297741939|emb|CBI33374.3| unnamed protein product [Vitis vinifera]
Length = 113
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/112 (66%), Positives = 85/112 (75%)
Query: 598 MLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQR 657
M K VKCL+ LG DL+HQY+M TQ+M L VY AIT+H ++Q+QKP +EW KS+ R
Sbjct: 1 MQKIVKCLNTLGIFDLVHQYVMCTQEMSLNVYHLLTAITLHHSIAQVQKPRIEWLKSFMR 60
Query: 658 YRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPV 709
YR FME M I SWH KI PY SRHLST+S VEDSISPLLHILSPPTLRPV
Sbjct: 61 YRMIFMENMGILMSWHKKIAPYSSRHLSTKSFVEDSISPLLHILSPPTLRPV 112
>gi|6323724|ref|NP_013795.1| Ctf18p [Saccharomyces cerevisiae S288c]
gi|1705792|sp|P49956.1|CTF18_YEAST RecName: Full=Chromosome transmission fidelity protein 18
gi|807960|emb|CAA89224.1| Chl12p [Saccharomyces cerevisiae]
gi|190408309|gb|EDV11574.1| protein CHL12 [Saccharomyces cerevisiae RM11-1a]
gi|207342351|gb|EDZ70138.1| YMR078Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256273480|gb|EEU08414.1| Ctf18p [Saccharomyces cerevisiae JAY291]
gi|259148652|emb|CAY81897.1| Ctf18p [Saccharomyces cerevisiae EC1118]
gi|285814081|tpg|DAA09976.1| TPA: Ctf18p [Saccharomyces cerevisiae S288c]
gi|323336279|gb|EGA77550.1| Ctf18p [Saccharomyces cerevisiae Vin13]
gi|323347164|gb|EGA81439.1| Ctf18p [Saccharomyces cerevisiae Lalvin QA23]
gi|365763804|gb|EHN05330.1| Ctf18p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392297238|gb|EIW08338.1| Ctf18p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 741
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 139/479 (29%), Positives = 230/479 (48%), Gaps = 56/479 (11%)
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA 368
P +K+LLL GPPG+GKT++AHV AK G+ V E+NASD+R+ ++ KI +++ ++
Sbjct: 174 PPKKILLLHGPPGIGKTSVAHVIAKQSGFSVSEINASDERAGPMVKEKIYNLLFNHTF-- 231
Query: 369 DSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKK 428
D+ P CLV DEIDG++ G + +++ ++ ++ K+ N QP+K KK+ K+
Sbjct: 232 DTNPVCLVADEIDGSIE--SGFIRILVDIMQSDIKAT----NKLLYGQPDKKDKKRKKKR 285
Query: 429 ASLL-RPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIAL 487
+ LL RP+ICICN+LYAP+L L+ ++ +PS + ++ RL IC+ E+M A+
Sbjct: 286 SKLLTRPIICICNNLYAPSLEKLKPFCEIIAVKRPSDTTLLERLNLICHKENMNIPIKAI 345
Query: 488 TTLAEYTECDIRSCLNTLQFL-------DKKKEILNVMDIGSQVVGRKDMSRSAFDIWKE 540
L + + D+R+C+N LQFL D + KD S F I +
Sbjct: 346 NDLIDLAQGDVRNCINNLQFLASNVDSRDSSASDKPACAKNTWASSNKDSPISWFKIVNQ 405
Query: 541 IFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLK 600
+F+K + ++ +F L + + G+ D I G ++Y D + K
Sbjct: 406 LFRKDPHR----------DIKEQFYELLNQVELNGNSDRILQGCFNIFPYVKYSDNGIRK 455
Query: 601 TVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRN 660
D L DLM+Q M L Y + + + I K R +N
Sbjct: 456 PANISDWLFFHDLMYQS-MYAHNGELLRYSALVPLVFFQTFGDIAN------KDDIRMKN 508
Query: 661 AFMEKMDIFKSWHSKIPPYISRHLSTESLV----EDSISPLLHILSPPTLRPVA------ 710
+ E+ ++ K +S I I RH+S +S + D S + IL P L +
Sbjct: 509 SEYEQREL-KRANSDIVSLIMRHISVQSPLMASFTDRKSLIFEIL--PYLDSMISSDFNK 565
Query: 711 LHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFI 769
+ L K+ + +LV + S+ L +S+ G +V L+ DPPI+E +
Sbjct: 566 IRNLKLKQA-IMEELVQLLKSFQLNLIQNRSE------GFDVR---GGLTIDPPIDEVV 614
Score = 49.7 bits (117), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 160 IDVLLQKVEQEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNR 219
I+ LL K+E + + Q + K + + LWV+K+ P F +L+ +E+TNR
Sbjct: 83 INYLLDKIEASG-----DDRTNAQKTSPITGK-IGSDTLWVEKWRPKKFLDLVGNEKTNR 136
Query: 220 EVLLWLKQWDSCVFGSEI 237
+L WL+QW VF ++
Sbjct: 137 RMLGWLRQWTPAVFKEQL 154
>gi|151946236|gb|EDN64467.1| chromosome transmission fidelity-related protein [Saccharomyces
cerevisiae YJM789]
gi|349580359|dbj|GAA25519.1| K7_Ctf18p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 741
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 139/479 (29%), Positives = 230/479 (48%), Gaps = 56/479 (11%)
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA 368
P +K+LLL GPPG+GKT++AHV AK G+ V E+NASD+R+ ++ KI +++ ++
Sbjct: 174 PPKKILLLHGPPGIGKTSVAHVIAKQSGFSVSEINASDERAGPMVKEKIYNLLFNHTF-- 231
Query: 369 DSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKK 428
D+ P CLV DEIDG++ G + +++ ++ ++ K+ N QP+K KK+ K+
Sbjct: 232 DTNPVCLVADEIDGSIE--SGFIRILVDIMQSDIKAT----NKLLYGQPDKKDKKRKKKR 285
Query: 429 ASLL-RPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIAL 487
+ LL RP+ICICN+LYAP+L L+ ++ +PS + ++ RL IC+ E+M A+
Sbjct: 286 SKLLTRPIICICNNLYAPSLEKLKPFCEIIAVKRPSDTTLLERLNLICHKENMNIPIKAI 345
Query: 488 TTLAEYTECDIRSCLNTLQFL-------DKKKEILNVMDIGSQVVGRKDMSRSAFDIWKE 540
L + + D+R+C+N LQFL D + KD S F I +
Sbjct: 346 NDLIDLAQGDVRNCINNLQFLASNVDSRDSTASDKPACAKNTWASSNKDSPISWFKIVNQ 405
Query: 541 IFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLK 600
+F+K + ++ +F L + + G+ D I G ++Y D + K
Sbjct: 406 LFRKDPHR----------DIKEQFYELLNQVELNGNSDRILQGCFNIFPYVKYSDNGIRK 455
Query: 601 TVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRN 660
D L DLM+Q M L Y + + + I K R +N
Sbjct: 456 PANISDWLFFHDLMYQS-MYAHNGELLRYSALVPLVFFQTFGDIAN------KDDIRMKN 508
Query: 661 AFMEKMDIFKSWHSKIPPYISRHLSTESLV----EDSISPLLHILSPPTLRPVA------ 710
+ E+ ++ K +S I I RH+S +S + D S + IL P L +
Sbjct: 509 SEYEQREL-KRANSDIVSLIMRHISVQSPLMASFTDRKSLIFEIL--PYLDSMISSDFNK 565
Query: 711 LHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFI 769
+ L K+ + +LV + S+ L +S+ G +V L+ DPPI+E +
Sbjct: 566 IRNLKLKQA-IMEELVQLLKSFQLNLIQNRSE------GFDVR---GGLTIDPPIDEVV 614
Score = 49.7 bits (117), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 160 IDVLLQKVEQEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNR 219
I+ LL K+E + + Q + K + + LWV+K+ P F +L+ +E+TNR
Sbjct: 83 INYLLDKIEASG-----DDRTNAQKTSPITGK-IGSDTLWVEKWRPKKFLDLVGNEKTNR 136
Query: 220 EVLLWLKQWDSCVFGSEI 237
+L WL+QW VF ++
Sbjct: 137 RMLGWLRQWTPAVFKEQL 154
>gi|378734379|gb|EHY60838.1| chromosome transmission fidelity protein 18 [Exophiala dermatitidis
NIH/UT8656]
Length = 950
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/349 (31%), Positives = 168/349 (48%), Gaps = 82/349 (23%)
Query: 164 LQKVEQE--AFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREV 221
LQ+ E++ A A + + Q D Q+W +KY FTEL+ DE+T+R +
Sbjct: 180 LQEFEKQRRAEELAKQPAEQVQEDHGSANLKTTRHQMWTEKYRAKKFTELVGDERTHRSI 239
Query: 222 LLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRN 281
L WLK WD VF S+ + L R+
Sbjct: 240 LRWLKSWDELVFPG---SSKPKTL--------------------------------RIRD 264
Query: 282 SNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVE 341
N L ++ HKK +LLL GPPGLGKTTLAHV AK GY V+E
Sbjct: 265 ENELSHQQ----------HKK----------ILLLTGPPGLGKTTLAHVCAKQAGYEVLE 304
Query: 342 VNASDDRSSSTIENKILDVVQMNSVMA---------DSRPKCLVIDEIDGALGDGKGA-- 390
+NASDDRS ++ +I D + +V RP C+V+DE+DG A
Sbjct: 305 INASDDRSRDVVKGRIKDALATETVRGIQEHGKARRSGRPVCVVVDEVDGVTTGSSSAGG 364
Query: 391 ----VEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPA 446
++ ++ +V +++++T+ A D +K+ KKKG + +LRP+I +CND+YAP+
Sbjct: 365 EGGFIKALIDLVQLDQRNSTS----ATHDN-QKLRKKKG-DRFRMLRPLILVCNDVYAPS 418
Query: 447 LRSLR--QIAK-VHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAE 492
LR LR +A+ +HV P + +V++R+K I E + + A+ L E
Sbjct: 419 LRPLRTSSLAEIIHVRKAP-IEKVIARMKTIFEKEHIPCDTDAVRRLCE 466
>gi|323332048|gb|EGA73459.1| Ctf18p [Saccharomyces cerevisiae AWRI796]
Length = 611
Score = 153 bits (387), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 118/388 (30%), Positives = 194/388 (50%), Gaps = 34/388 (8%)
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA 368
P +K+LLL GPPG+GKT++AHV AK G+ V E+NASD+R+ ++ KI +++ ++
Sbjct: 174 PPKKILLLHGPPGIGKTSVAHVIAKQSGFSVSEINASDERAGPMVKEKIYNLLFNHTF-- 231
Query: 369 DSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKK 428
D+ P CLV DEIDG++ G + +++ ++ ++ K+ N QP+K KK+ K+
Sbjct: 232 DTNPVCLVADEIDGSIE--SGFIRILVDIMQSDIKAT----NKLLYGQPDKKDKKRKKKR 285
Query: 429 ASLL-RPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIAL 487
+ LL RP+ICICN+LYAP+L L+ ++ +PS + ++ RL IC+ E+M A+
Sbjct: 286 SKLLTRPIICICNNLYAPSLEKLKPFCEIIAVKRPSDTTLLERLNLICHKENMNIPIKAI 345
Query: 488 TTLAEYTECDIRSCLNTLQFL-------DKKKEILNVMDIGSQVVGRKDMSRSAFDIWKE 540
L + + D+R+C+N LQFL D + KD S F I +
Sbjct: 346 NDLIDLAQGDVRNCINNLQFLASNVDSRDSSASDKPACAKNTWASSNKDSPISWFKIVNQ 405
Query: 541 IFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLK 600
+F+K + ++ +F L + + G+ D I G ++Y D + K
Sbjct: 406 LFRKDPHR----------DIKEQFYELLNQVELNGNSDRILQGCFNIFPYVKYSDNGIRK 455
Query: 601 TVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRN 660
D L DLM+Q M L Y + + + I K R +N
Sbjct: 456 PANISDWLFFHDLMYQS-MYAHNGELLRYSALVPLVFFQTFGDIAN------KDDIRMKN 508
Query: 661 AFMEKMDIFKSWHSKIPPYISRHLSTES 688
+ E+ ++ K +S I I RH+S +S
Sbjct: 509 SEYEQREL-KRANSDIVSLIMRHISVQS 535
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 160 IDVLLQKVEQEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNR 219
I+ LL K+E + + Q + K + + LWV+K+ P F +L+ +E+TNR
Sbjct: 83 INYLLDKIEASG-----DDRTNAQKTSPITGK-IGSDTLWVEKWRPKKFLDLVGNEKTNR 136
Query: 220 EVLLWLKQWDSCVFGSEI 237
+L WL+QW VF ++
Sbjct: 137 RMLGWLRQWTPAVFKEQL 154
>gi|322712485|gb|EFZ04058.1| hypothetical protein MAA_01132 [Metarhizium anisopliae ARSEF 23]
Length = 958
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 153/585 (26%), Positives = 245/585 (41%), Gaps = 138/585 (23%)
Query: 139 VEERVKKLDVRAHSNSLTSEPIDVLLQKVEQEAFNKALNSSSEGQSDRSLPEKPVVHEQ- 197
V R K + RA + E I L+ K +E NK L S++ + S E P+ E+
Sbjct: 152 VAARSKTKEGRAKRSYYGIE-IHDLINKAAKEISNKPLTVSTKPDTIISSLEAPISGEKP 210
Query: 198 ----LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHST 253
LW +KY +F +L D+ TNR+VL WLK+WD VF + + ++ V++ RR
Sbjct: 211 KKTLLWTEKYRARNFMDLCGDDGTNRQVLRWLKRWDPVVFPGQAK--AKPVMT--RRPGA 266
Query: 254 ISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKV 313
Q LE E P +K+
Sbjct: 267 KHQ----------------------------LEEEK-------------------PHRKI 279
Query: 314 LLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV------- 366
L+L GPPGLGKTTLAHV AK GY V+EVNASDDRS + ++I + SV
Sbjct: 280 LMLTGPPGLGKTTLAHVCAKQAGYEVLEVNASDDRSRDVVRDRIRTSLGTESVKNVTNNK 339
Query: 367 -----MADSRPKCLVIDEIDGALGDGKGA-----VEVILKMVSAERKSNTAKENVAKEDQ 416
++P C+++DE+DG + ++ ++ +V ++++++A +
Sbjct: 340 ASDGSQKIAKPVCVIVDEVDGVTSGAGASGEGGFIKALIDLVLTDQRNSSAPTS------ 393
Query: 417 PEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQ--IAKVHVFIQPSVSRVVSRLKHI 474
E KKK +RP++ ICND+Y P+LR LRQ +A++ +PS+ VV R+K+I
Sbjct: 394 -EYSHKKKKGDDFRQMRPLVLICNDVYHPSLRPLRQSNLAEIVHVGRPSLDAVVGRVKNI 452
Query: 475 -------CNNESMK---------TSSI---------------ALTTLAEYTECDIRSCLN 503
C+ ++ + TS I + + E+ RSCL
Sbjct: 453 FEKEGIPCDKDAARKLCEAAWGMTSGIDAKRGAESTVEGDLRGVMVVGEWVAGRFRSCLG 512
Query: 504 TLQFLDKKKEILN--VMDIGSQVVGRKDMSRSAF-DIWKEIFQK-----RKTKRLRNSVS 555
+ I N + D+ S G + + R DI + +FQ+ ++ L S +
Sbjct: 513 HANQRLTRPWIENNILRDLSSSAAGARGLGRGNVRDIIQRVFQEGGGFPKQAMDLSESKT 572
Query: 556 SSSNVSNEFDF-----------LHSLISNRGDYDVIFDGIHENILQLQYHDPVML-KTVK 603
E F L ++ G+ I I +++D + L K +
Sbjct: 573 LHEQPKAELGFGEQQKKYAMGRLGQMVDTSGEISTILTEIFAEYPNREFNDDIYLAKPNQ 632
Query: 604 CLDCLGNSDLMHQYIMRTQQMPL--YVYQPPLAITVHRLVSQIQK 646
D L D + + + L Y+ QP LA H L + +K
Sbjct: 633 AYDWLHFHDSCQSRLYASHEWELAPYLSQPILA--CHHLFASPKK 675
>gi|449281358|gb|EMC88438.1| Chromosome transmission fidelity protein 18 like protein, partial
[Columba livia]
Length = 254
Score = 150 bits (380), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/246 (38%), Positives = 132/246 (53%), Gaps = 41/246 (16%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LWVDK+ P + ELLSD+ TNR +L WLK WD+ VFG E +A+++ S+
Sbjct: 47 LWVDKFTPRRYMELLSDDYTNRCLLKWLKLWDTVVFGKE---------NAVKK----SKP 93
Query: 258 KKQNDSSFTR-KNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLL 316
+ F++ K + N+W LE E HK+ P+ KV LL
Sbjct: 94 STEARPPFSQPKEQQNKWKTKVQLTEEILEAELDQ--------HKR------PKYKVALL 139
Query: 317 CGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM-ADSRPKCL 375
CGPPGLGKTTLAHV AKH GY+ VE+NASDDRS + +I QM SV+ A+ +P CL
Sbjct: 140 CGPPGLGKTTLAHVIAKHAGYNAVEMNASDDRSPEVFKTRIEAATQMKSVLGANEKPNCL 199
Query: 376 VIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPV 435
+IDEIDGA ++ ++L +++ + A V + + E + P+
Sbjct: 200 IIDEIDGA---PTASINMLLNIINQKDAEGEAAAGVGRRRRREGGLLLR---------PI 247
Query: 436 ICICND 441
ICICND
Sbjct: 248 ICICND 253
>gi|403413827|emb|CCM00527.1| predicted protein [Fibroporia radiculosa]
Length = 752
Score = 149 bits (377), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 126/470 (26%), Positives = 210/470 (44%), Gaps = 57/470 (12%)
Query: 345 SDDRSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKS 404
SD RS+ IE ++ +++ + ++P VIDEIDGA G + I K++S
Sbjct: 220 SDARSAQVIEERLRPILETGCTVGSTKPTLAVIDEIDGATGGSDNSAGFIQKLISL---- 275
Query: 405 NTAKENVAKEDQPEKISKKKGCKKAS-LLRPVICICNDLYAPALRSLRQIAKVHVFIQPS 463
D+P K +K K + LLRP+ICICNDLYA +L LR A+V F +P+
Sbjct: 276 --------TYDKPRKKGRKIDPKASRPLLRPIICICNDLYASSLTKLRAYARVIRFSRPN 327
Query: 464 VSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQ 523
+V RL+ IC E ++T S ALTTL + D+R CLN LQ + + + + +
Sbjct: 328 DIHLVRRLRDICEIEGLRTESRALTTLVGVAQGDLRGCLNMLQLMKARGRDVTEPAVRTA 387
Query: 524 VVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDG 583
G K+ S + ++F +R + + + L I + G D I G
Sbjct: 388 TAGMKETEASQTSVLNDLFTPMPRRRAKELGITEEEEARYVGRLSREIESSGTLDRIASG 447
Query: 584 IHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQ 643
+Y P L D+M + ++ L Y P + + + L +
Sbjct: 448 --------KYPVPSNY-------WLTAYDVMSGEMWSEREYALMQYLPYMLVAFYPLFQE 492
Query: 644 IQKPNLEWPKSYQRYRNAFMEKM--DIFKSWHSKIPPYIS------RHLSTESLVEDSIS 695
+E PK Y N + K +I+KS + + RH ++ES++
Sbjct: 493 RGGCKVERPKV--DYENYVITKANEEIYKSLVHCLCSAAARNGGDYRHFASESVLRLEFV 550
Query: 696 PLLH-ILSPPTLRPVAL-----HLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLG 749
PL++ I+SPP L+P +L ++ E+ L +LV+ MVS L + K
Sbjct: 551 PLVNRIISPP-LKPASLITVNRQIIRPGERAVLDRLVNIMVSMELRFVQEK--------- 600
Query: 750 NEVSHDVSTLSFDPPINEFITFKGYRSNHYVLA-LAVKQVLVHEVEKQRI 798
+ DPPI+ F+T+ G R+ ++ AV+ ++ E++ + +
Sbjct: 601 --MEDGQLMFRLDPPIDVFVTYDGKRAADIAVSKYAVRHLVATEIDARLV 648
>gi|366994316|ref|XP_003676922.1| hypothetical protein NCAS_0F00820 [Naumovozyma castellii CBS 4309]
gi|342302790|emb|CCC70566.1| hypothetical protein NCAS_0F00820 [Naumovozyma castellii CBS 4309]
Length = 739
Score = 149 bits (376), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 145/517 (28%), Positives = 240/517 (46%), Gaps = 66/517 (12%)
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA 368
P++++LL+ GPPG+GKT++AHV AK G+ + E+NASD+R+ + +KI + + N
Sbjct: 173 PQKRILLIHGPPGIGKTSVAHVLAKQAGFSIAEINASDERAGPLVRDKINNTL-FNHTFN 231
Query: 369 DSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKG--- 425
S P CLV DE+DG+L +G G + V+L +++ + K+ T K + + K K K
Sbjct: 232 GS-PVCLVADEVDGSL-EG-GFIRVLLDIINNDEKA-TQKLTLGQNSSFIKKLKSKSKKK 287
Query: 426 CKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSI 485
++ L RP+I ICN+LY+PAL LR + ++ F +PS ++ RL+H+ E ++ +
Sbjct: 288 TQQRLLTRPIIAICNNLYSPALEKLRPLCEIVSFKRPSDKALLERLEHVSIKEGLELNKK 347
Query: 486 ALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKR 545
L L + + D+R+C+N LQFL + + + + KD S F I +F+K
Sbjct: 348 TLNELIDLAQGDVRNCINNLQFLASGNQSTSTDNNNTWDNSNKDSIVSWFRIVNALFRK- 406
Query: 546 KTKRLRNSVSSSSNVSNEF-DFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKC 604
+ +V +F D LH++ N G YD I G ++Y D + K
Sbjct: 407 ---------DAHRDVKEQFRDLLHAVEVN-GSYDRIVQGCFSLFPYVKYSDNGVKKPAVV 456
Query: 605 LDCLGNSDLMHQYIMR-TQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFM 663
D L D M + + ++ Y PLA Q K R +NA
Sbjct: 457 SDWLYFHDRMFNSLYQHNGELLRYCSIVPLAF--------FQNFGDVANKEDMRIKNAEF 508
Query: 664 EKMDIFKSWHSKIPPYISR----------HLSTESLVEDSISPLLHILSPPTLRPVALHL 713
E +I KS + I R + +L+ D + + +LS + L +
Sbjct: 509 ENREIQKSNADILSSLIHRISMENPKMMSFIDRNTLIFDILPYVDRMLSSDISKVKDLTV 568
Query: 714 LSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFI---- 769
SA L L++ + + L + G E+ + +L+ DPPI++ +
Sbjct: 569 KSAM----LEDLLNILNYFVLKITQVPA------FGMEIKN---SLTLDPPIDKVVLLEP 615
Query: 770 ------TFKGYRSNHYVLA----LAVKQVLVHEVEKQ 796
TFK H +LA VK+ + +VEKQ
Sbjct: 616 SSVKNATFKRPTMLHLLLAKIEERKVKKRRIDKVEKQ 652
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 11/80 (13%)
Query: 160 IDVLLQKVEQEA--FNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQT 217
I+VLL ++E ++ LNS ++ ++ +S +LWV+K+ P F +L+ +E+
Sbjct: 84 INVLLDRIEATTPTTDQNLNSITKNKNKQS---------KLWVEKWRPKGFLDLVGNERN 134
Query: 218 NREVLLWLKQWDSCVFGSEI 237
NR +L WL+QW VF E+
Sbjct: 135 NRRILRWLRQWSPVVFKEEL 154
>gi|322695402|gb|EFY87211.1| hypothetical protein MAC_06771 [Metarhizium acridum CQMa 102]
Length = 958
Score = 147 bits (371), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 119/415 (28%), Positives = 183/415 (44%), Gaps = 86/415 (20%)
Query: 139 VEERVKKLDVRAHSNSLTSEPIDVLLQKVEQEAFNKALNSSSEGQSDRSLPEKPVVHEQ- 197
V R K + RA + E I L+ K +E N L +E + + E P+ +
Sbjct: 152 VAARSKTKEGRAKRSYYGIE-IHDLINKAAKEMTNNPLTVPTERGAIIASLETPISGNKP 210
Query: 198 ----LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHST 253
LW +KY +F +L D+ TNR+VL WLK+WD VF + R+ V +H
Sbjct: 211 KKTLLWTEKYRAQNFMDLCGDDSTNRQVLRWLKRWDPVVFPGQTRAKPVIVRRPGAKH-- 268
Query: 254 ISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKV 313
LE E P +K+
Sbjct: 269 ------------------------------QLEEEK-------------------PHRKI 279
Query: 314 LLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV------- 366
L+L GPPGLGKTTLAHV AK GY V+E+NASDDRS + N+I + SV
Sbjct: 280 LMLTGPPGLGKTTLAHVCAKQAGYEVLEINASDDRSRDVVRNRIRTSLGTESVKNVTNNK 339
Query: 367 -----MADSRPKCLVIDEIDGALGDGKGA-----VEVILKMVSAERKSNTAKENVAKEDQ 416
++P C+++DE+DG + V+ ++ +V ++++++ +
Sbjct: 340 ASDGSQKIAKPVCVIVDEVDGVTSGAGASGEGGFVKALIDLVLTDQRNSSLPTS------ 393
Query: 417 PEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQ--IAKVHVFIQPSVSRVVSRLKHI 474
E KKK +RP++ ICND+Y P+LR LRQ +A++ +PS+ VV R+K+I
Sbjct: 394 -EYSHKKKKGDDFRQMRPLVLICNDVYHPSLRPLRQSNLAEIVHVGRPSLDAVVGRVKNI 452
Query: 475 CNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKE--ILNVMDIGSQVVGR 527
E + A L E + S ++ + + E + VM +G V GR
Sbjct: 453 FEKEGIPCDKDAARKLCE-AAWGMTSGIDAKRGAESTVEGDLRGVMVVGEWVAGR 506
>gi|358394126|gb|EHK43527.1| hypothetical protein TRIATDRAFT_34454 [Trichoderma atroviride IMI
206040]
Length = 935
Score = 147 bits (371), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 199/859 (23%), Positives = 332/859 (38%), Gaps = 231/859 (26%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LW +KY +F +L D+ TNR VL WLK+WD VF ++ + L+R
Sbjct: 195 LWTEKYRARNFMDLCGDDSTNRLVLRWLKKWDPLVFPGTAKAKPK-----LQR------- 242
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
RN N + E P +K+L+L
Sbjct: 243 ----------------------RNGPNSQVEEEK-----------------PHRKILMLT 263
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVV------------QMNS 365
GPPGLGKTTLAHV AK GY V+EVNASDDRS ++N+I + +N
Sbjct: 264 GPPGLGKTTLAHVCAKQAGYEVIEVNASDDRSRDVVKNRIRTSLGTESVKNVGNQKALNG 323
Query: 366 VMADSRPKCLVIDEI------DGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEK 419
++P C+V+DE+ GA G+G G ++ ++ +V ++K+ + V+K +
Sbjct: 324 SQKVAKPACVVVDEVDGVVTGSGASGEG-GFIKALIDLVLIDQKNASG---VSKTYE--- 376
Query: 420 ISKKKGCKKASLLRPVICICNDLYAPALRSLRQ--IAKVHVFIQPSVSRVVSRLKHICNN 477
KKK L+RP+I ICND+Y P+LR LRQ +A++ +P++ VV RLK +
Sbjct: 377 -GKKKKGDDFRLMRPLILICNDVYHPSLRPLRQSNLAEIIHVGRPTLDTVVGRLKTVFEK 435
Query: 478 ESMKTSSIALTTLAEYT-----------------ECDIR---------------SCLNTL 505
E + A L E + D+R S LN
Sbjct: 436 EGIPCDKDAARKLCETAWGMANGIDARRGQESTVQGDLRGIMVIGEWVASQFRVSSLNAT 495
Query: 506 QFLDKKKEILNVM-DIGSQVVGRKDMSRSAF-DIWKEIFQK-----RKTKRLRNSVSSSS 558
Q L ++ N++ ++ + G + + R + DI +FQ+ ++ L S ++
Sbjct: 496 QRLTREWIERNILQELANGAAGTRGLGRGSVKDIITRLFQEGGGFPKQALSLSKSKTAHE 555
Query: 559 NVSNEFDF-----------LHSLISNRGDYDVIFDGIHENILQLQYHDPVML-KTVKCLD 606
E F L +I + G+ + + +++D L K + D
Sbjct: 556 QPKTELGFGEHQKKYAMECLRQMIDSSGEISHVVTEVFAEYPNREFNDDSYLTKPNQAYD 615
Query: 607 CLGNSDLMHQYIMRTQQMPL--YVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYR----- 659
L D + +Q+ L Y+ QP LA H L + ++ + QR R
Sbjct: 616 WLYFHDACQSRLFASQEWELSPYLAQPVLA--CHHLFASPKRHYANTMANGQRAREEEAG 673
Query: 660 ------------NAFMEKMDI---FKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPP 704
AF + +S ++ P + R + V P L + P
Sbjct: 674 PSIPFSGPRADYQAFEAEKQTRAQLQSLQGQLSPTMMRLFRSAEDVATEFLPYLARMLAP 733
Query: 705 TLRPVALH-----LLSAKEKNDLAQL-----VSAMVSYSLTYKNTKSDPLLNNLGNEVSH 754
++PV + S +++++ A + V A V +L ++D + +N G + +
Sbjct: 734 DVKPVVVGGSQGTTASVRKESERAMVKRASEVLAEVGIALQKGKIEAD-VASNRGPQFVY 792
Query: 755 DVSTLSFDPPINEFITFK--GYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADG 812
DP I+ TF+ ++ AV+QVL E+ + ++ T+ + G
Sbjct: 793 -----RMDPDIDALSTFETASLLTSQPPTRFAVRQVLDQELHRTLAIRETVARQARFRAG 847
Query: 813 YKENMDLAGEED-----SKTESAKTNNAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDS 867
+ GE D S T+ +K + A V L+ K Q P +
Sbjct: 848 R-----VVGESDQHQPQSLTQPSKDDMAIVEDGLVVKKDFFGRIIQAQP----LAEVTGG 898
Query: 868 SRSSTASVKPKSSGDTKKSFRSSSSFFDRFRKLSGKVSQDNDNAVQKATVERDSLPLLFK 927
+R A+ + K +
Sbjct: 899 AREKKAATQEK---------------------------------------------VWVT 913
Query: 928 FNEGFTNAVKRPVRMRDFL 946
F+EG NAV++P+ +R+FL
Sbjct: 914 FHEGLNNAVRKPMMLREFL 932
>gi|240275902|gb|EER39415.1| chromosome transmission fidelity protein [Ajellomyces capsulatus
H143]
Length = 939
Score = 146 bits (368), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 171/700 (24%), Positives = 277/700 (39%), Gaps = 170/700 (24%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
+W +KY F +L+ DE+T+R VL WLK WDS VF L+ L+ S +S N
Sbjct: 206 MWTEKYRARKFKDLIGDERTHRSVLRWLKGWDSIVFPG---------LTKLK--SKVSTN 254
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKT-RSTGPPEQKVLLL 316
++ H+K TGPP
Sbjct: 255 D------------------------------------FEERAHRKVLLLTGPP------- 271
Query: 317 CGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-------- 368
GLGKTTLAHV AK GY V+E+NASD+RS ++ +I D V +V
Sbjct: 272 ----GLGKTTLAHVCAKQAGYEVLEINASDERSRDVVKGRIRDAVGTENVKGVTMDAGGK 327
Query: 369 ----DSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKK 424
+P C+V+DE+DG G K +++++ +R S+ A E+++ ++ +K
Sbjct: 328 RIRKPGKPVCIVVDEVDGVGGFMKALIDLVML---DQRNSSNASESISTSNK----GSRK 380
Query: 425 GCKKASLLRPVICICNDLYAPALRSLR--QIAKVHVFIQPSVSRVVSRLKHICNNESMK- 481
G +K LLRP+I ICND+Y P+LR LR IA++ Q S+ +VV R+K + E +
Sbjct: 381 G-EKFRLLRPLILICNDVYHPSLRPLRASSIAEIIHVRQASLDKVVLRMKTVFEREGIPY 439
Query: 482 ---------TSSIALTTLAEYT------ECDIRSCLN--------------------TLQ 506
+S LT+ E T E DIR L T Q
Sbjct: 440 DGDGVRRLCEASWGLTSTRERTNSRGIGEGDIRGVLVAGEWIAHTLRAASLTADIRLTRQ 499
Query: 507 FLDK------KKEILNVMDIG----SQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSS 556
+++K ++ L+ +G ++ R + + F Q + L
Sbjct: 500 WVEKHILSGAARDGLSARGLGRGGTKDIIERVFLDGAGFPTAPTSAQTFQDPLLGGDTKP 559
Query: 557 SSNVSN-----EFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVML-KTVKCLDCLGN 610
+ VS+ + L ++ G+YD Y D L K + L
Sbjct: 560 PTGVSDLRKRHAINSLREMVDAAGEYDRCITECFTTYPTKTYQDDTFLSKPNAAYEWLYF 619
Query: 611 SDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRN---------- 660
D++ + Q L Y H L S + + K++ +
Sbjct: 620 HDMVSSKVYTNQDWELNPYLSQSVAAFHHLFSSSNRQTWDGDKAHTNNEDDEDDHPFSGP 679
Query: 661 -AFMEKMDIFKSWHSKI--------PPYISRHLSTESLVEDSISPLLHILSPPTLRPVAL 711
A + K H+ I PP + STES++ D I L +L+ P ++PV +
Sbjct: 680 KADFAAFEAQKQNHAIITEFQSTFSPPLLRTFRSTESIIIDLIPYLTRMLA-PEIKPVVV 738
Query: 712 -------HLLSAKEKNDLAQLVSA---MVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSF 761
+ S ++ + A + SA M + ++NT+ + H+
Sbjct: 739 GGSGIQRGVASVRKDTERALVKSAVRVMSGIGVKFENTRVE------SETGVHNGWVYRM 792
Query: 762 DPPINEFITFKGYR-SNHYVLALAVKQVLVHEVEKQRIMQ 800
+PP++ F + S + A++QVL E EK+ + Q
Sbjct: 793 EPPLDTLTMFSKLKGSGSTPVRYAIRQVLQQEYEKEILRQ 832
>gi|167519461|ref|XP_001744070.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777156|gb|EDQ90773.1| predicted protein [Monosiga brevicollis MX1]
Length = 168
Score = 146 bits (368), Expect = 6e-32, Method: Composition-based stats.
Identities = 77/171 (45%), Positives = 108/171 (63%), Gaps = 5/171 (2%)
Query: 313 VLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-DSR 371
V+LL GPPG+GKTTLAHV A+H GY VE+NASDDRS + ++ ++++ QM V+ D R
Sbjct: 1 VVLLAGPPGVGKTTLAHVVARHAGYSSVEINASDDRSPAALKERVINATQMQEVIGRDRR 60
Query: 372 PKCLVIDEIDGALGDGKGAVEVILKMVSAE-RKSNTAKENVAKEDQPEKISKKKGCKKAS 430
P CLV+DEIDGA KGA+ ++K+V A R++ + + P + K+ +
Sbjct: 61 PNCLVLDEIDGA---SKGAINALIKIVQATGRRTCSHLGLLHSVAWPSRCGGKRKGALPA 117
Query: 431 LLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMK 481
L RP+ICICNDL APALR LRQIA F + ++ RL IC + ++
Sbjct: 118 LRRPIICICNDLQAPALRPLRQIALQINFAPIENNALIGRLLTICERKGVR 168
>gi|346977169|gb|EGY20621.1| chromosome transmission fidelity protein [Verticillium dahliae
VdLs.17]
Length = 947
Score = 146 bits (368), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 162/356 (45%), Gaps = 90/356 (25%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LW +KY +F +L D+ TNR VL WLK+WD V + I +
Sbjct: 197 LWTEKYRARTFMDLCGDDSTNRTVLRWLKRWDPI------------VFPGATNRAPIVRR 244
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
D++ K P +K+L+L
Sbjct: 245 PAAKDAAVEEK----------------------------------------PHRKILMLT 264
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV--MAD------ 369
GPPGLGKTTLAHV A+ GY V+E+NASDDRS ++N+I + SV +A+
Sbjct: 265 GPPGLGKTTLAHVCARQAGYEVMEINASDDRSRDVVKNRIRTSLGTESVRTVANRKTGSD 324
Query: 370 ------SRPKCLVIDEIDGALGDGKGA-----VEVILKMVSAERKSNTAKENVAKEDQPE 418
+RP C+++DE+DGA+ + V+ ++ +V ++K++ A + +
Sbjct: 325 GQQAKVARPACVIVDEVDGAVSGSGASGEGGFVKALIDLVLLDQKNSGAAGSTSH----- 379
Query: 419 KISKKKGCKKASLLRPVICICNDLYAPALRSLRQ--IAKVHVFIQPSVSRVVSRLKHICN 476
KKK L+RP+I ICND+Y P+LR LRQ +A+V +P++ VV+RLK + +
Sbjct: 380 ---KKKKGDDFRLMRPLILICNDVYHPSLRPLRQSGLAEVIHVGKPTIESVVTRLKSVFD 436
Query: 477 NESMKTSSIALTTLAE-----YTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGR 527
E + A + E T D + + + ++ VM +G V GR
Sbjct: 437 KEGVPCDKDAARKICEAAWGMATGNDAKRGAQS----GAEGDLRGVMVVGEWVAGR 488
>gi|346325124|gb|EGX94721.1| sister chromatid cohesion factor (Chl12), putative [Cordyceps
militaris CM01]
Length = 962
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 152/613 (24%), Positives = 241/613 (39%), Gaps = 160/613 (26%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LW +KY SF +L D+ TNR VL WLK+WD VF
Sbjct: 212 LWTEKYRARSFMDLCGDDGTNRIVLRWLKRWDPVVF----------------------PG 249
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
K N F R + L+ E P +++LLL
Sbjct: 250 AKPNYGVFKRLG-------------SKLQVEEEK-----------------PHRRILLLT 279
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV-----MADS-- 370
GPPGLGKTTLAHV A+ GY V+E+NASDDRS ++N+I + +V + DS
Sbjct: 280 GPPGLGKTTLAHVCARQAGYEVLEINASDDRSRDVVKNRIRTSLGTENVKNVANLKDSEG 339
Query: 371 -----RPKCLVIDEIDGALGDGKGA-----VEVILKMVSAERKSNTAKENVAKEDQPEKI 420
+P C+++DE+DG + + ++ ++ +V ++K+ +
Sbjct: 340 HTKAAKPVCVIVDEVDGVVSGSGASGEGGFIKALIDLVLLDQKNGAPAARSYNRSR---- 395
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQ--IAKVHVFIQPSVSRVVSRLKHICNNE 478
KKK ++RP++ ICND+Y P+LR LRQ +A+V +PS+ VV+RLK + E
Sbjct: 396 -KKKRGDDFRMMRPLVLICNDVYHPSLRPLRQSNLAEVVHVGRPSIDAVVARLKAVFEKE 454
Query: 479 SM----------------KTSSIALTTLAEYT-ECDIRSCLNTLQFLDKK---------- 511
+ TS I AE T E D+R + +++ +
Sbjct: 455 GIPCDKDASRKLCEAAWGMTSGIDARRGAESTVEGDLRGVMVVGEWVAARFRSTSLATSS 514
Query: 512 ---------KEILNVMDIGSQVVGRKDMSRSAF-DIWKEIFQKRKT-KRLRNSVSSSSNV 560
ILN D+ S G + + R DI +FQ+ + +S S N
Sbjct: 515 QRLTRQWIESHILN--DLSSGAAGARGLGRGNVRDIVSRLFQEGGGFPKQAMDLSVSKNT 572
Query: 561 SNE----------------FDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVML-KTVK 603
+E D L ++ G+ I I Y+D + L K +
Sbjct: 573 QHEQPKTELGFNEQVKKHGMDRLRQMVETSGEISYIMTEIMAEYPNRDYNDDLYLSKPNQ 632
Query: 604 CLDCLGNSDLMHQYIMRTQQMPL--YVYQPPLAITVHRLVSQIQK------PNLEW---- 651
+ L D + +Q+ L Y+ QP LA H L + ++ W
Sbjct: 633 AYEWLFFHDACQSRLFASQEWELSPYLSQPVLA--CHHLFASPRRHYAPTSGGGRWGADA 690
Query: 652 -------------PKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLL 698
P++ + R A ++ S++P + R + + + P L
Sbjct: 691 ANEDAGPPVPFSGPRADYQAREAEKHNRAALQAMQSQLPASLMRSFRSAEDMATDLLPYL 750
Query: 699 HILSPPTLRPVAL 711
L+ P ++PV L
Sbjct: 751 ARLTSPDVQPVLL 763
>gi|401418851|ref|XP_003873916.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490149|emb|CBZ25410.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 1289
Score = 145 bits (367), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 152/352 (43%), Gaps = 81/352 (23%)
Query: 186 RSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVL 245
R P + + +LWV KY+P F E+LSDE N +L WLK WD+ VF + S +
Sbjct: 313 RPRPHRASSNGELWVTKYSPKLFHEVLSDETVNLRLLQWLKSWDAYVFPDDAPSAA---- 368
Query: 246 SALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRS 305
KG Q S +
Sbjct: 369 -----------------------------------------------KGAQASGAGAITA 381
Query: 306 TGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVV---- 361
PP +++ +L GPPG+GKTTL HV A HCGY V+EVNAS +R++S +E I V
Sbjct: 382 ASPPAERIAVLTGPPGVGKTTLVHVLAAHCGYEVIEVNASVERTASRLEALIKTAVSAAG 441
Query: 362 -----QMNSVMADSRPKCLVIDEID---------GALGDGKGAVEVILKMVSAERKSNTA 407
++ A S + ID G G GA S S++
Sbjct: 442 PAPGGRVRRPTASSGVAGSAVSTIDHRANLGVEKGHSGGASGAEMAATGAPSTPHASSSL 501
Query: 408 KENVAKE-----DQPEKISKKKGCK---KASLLRPVICICNDLYAPALRSLRQIAKVHVF 459
+++ + D+ + I+ + L RPV C+CND Y P+LR LRQ HV+
Sbjct: 502 VQHLLRPKCLVIDEMDGIANSSVAAYLTQQQLHRPVFCLCNDFYVPSLRPLRQHC-THVY 560
Query: 460 IQPSV--SRVVSRLKHICNNESMKT-SSIALTTLAEYTECDIRSCLNTLQFL 508
P + R++SRL+ I E S+AL+ L + + D+RSCLN +Q +
Sbjct: 561 HMPPIRPQRLLSRLEEIARREGAAMFDSMALSELIKTSGGDVRSCLNAMQLI 612
>gi|398408041|ref|XP_003855486.1| hypothetical protein MYCGRDRAFT_99173 [Zymoseptoria tritici IPO323]
gi|339475370|gb|EGP90462.1| hypothetical protein MYCGRDRAFT_99173 [Zymoseptoria tritici IPO323]
Length = 854
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 155/316 (49%), Gaps = 79/316 (25%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LW +KY FT+L+ DE+T+R V+ WLK+WD VF R +
Sbjct: 110 LWTEKYRAKKFTDLIGDERTHRAVMHWLKRWDQIVFPGSYRP---------------KKP 154
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
K +D++F + P +K+LLL
Sbjct: 155 KGSDDTAFVER----------------------------------------PLRKILLLT 174
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA--------- 368
GPPGLGKTTLAHV AK GY V E+NASD+RSSS ++ +I D+V +V
Sbjct: 175 GPPGLGKTTLAHVCAKQAGYEVQEINASDERSSSVVKGRIRDMVGTENVKGIDTKTASGH 234
Query: 369 ---DSRPKCLVIDEIDGALGDGKGA-----VEVILKMVSAERKSNTAKENVAKEDQPEKI 420
+P C+++DE+DG +G G+ V+ ++ ++ ++K++T ++ + P K
Sbjct: 235 TRKAGKPVCVIVDEVDGVVGGSGGSGEGGFVKALIDLIMLDQKNSTPLGSL--QQAPTK- 291
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQ--IAKVHVFIQPSVSRVVSRLKHICNNE 478
KKKG ++ +LRP+I +CND+Y P+LR LR +A+V + V ++SRL I E
Sbjct: 292 -KKKG-ERFRMLRPLILVCNDVYHPSLRPLRNSSVAEVIRVGKAPVQNMISRLHGIFQKE 349
Query: 479 SMKTSSIALTTLAEYT 494
+ + + L E T
Sbjct: 350 GVPCETDGVRRLCEAT 365
>gi|302406781|ref|XP_003001226.1| chromosome transmission fidelity protein [Verticillium albo-atrum
VaMs.102]
gi|261359733|gb|EEY22161.1| chromosome transmission fidelity protein [Verticillium albo-atrum
VaMs.102]
Length = 945
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 163/356 (45%), Gaps = 90/356 (25%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LW +KY +F +L D+ TNR VL WLK+WD VF
Sbjct: 197 LWTEKYRARTFMDLCGDDSTNRTVLRWLKRWDPIVFPGAT-------------------- 236
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
N + R+ + +++ H+K +L+L
Sbjct: 237 ---NKAPIVRR-------------------PAAKDAAVEEKPHRK----------ILMLT 264
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV--MAD------ 369
GPPGLGKTTLAHV A+ GY V+E+NASDDRS ++N+I + SV +A+
Sbjct: 265 GPPGLGKTTLAHVCARQAGYEVMEINASDDRSRDVVKNRIRTSLGTESVRTVANRKTGSD 324
Query: 370 ------SRPKCLVIDEIDGALGDGKGA-----VEVILKMVSAERKSNTAKENVAKEDQPE 418
+RP C+++DE+DGA+ + V+ ++ +V ++K++ A + +
Sbjct: 325 GQQAKVARPACVIVDEVDGAVSGSGASGEGGFVKALIDLVLLDQKNSGAAGSTSH----- 379
Query: 419 KISKKKGCKKASLLRPVICICNDLYAPALRSLRQ--IAKVHVFIQPSVSRVVSRLKHICN 476
KKK L+RP+I ICND+Y P+LR LRQ +A+V +P++ V +RLK + +
Sbjct: 380 ---KKKKGDDFRLMRPLILICNDVYHPSLRPLRQSGLAEVIHVGKPTIESVATRLKSVFD 436
Query: 477 NESMKTSSIALTTLAE-----YTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGR 527
E + A + E T D + + + ++ VM +G V GR
Sbjct: 437 KEGVPCDKDAARKICEAAWGMATGNDAKRGAQS----GAEGDLRGVMVVGEWVAGR 488
>gi|154335160|ref|XP_001563820.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134060849|emb|CAM37866.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 1333
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 165/359 (45%), Gaps = 79/359 (22%)
Query: 178 SSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEI 237
+++ G R P + +LWV KY+P F E+LSDE N +L WLK WD+ VF
Sbjct: 344 TAAAGAFPRHRPHSTSSNGELWVTKYSPKLFREVLSDETINLRLLQWLKSWDAYVF---- 399
Query: 238 RSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQD 297
+E LSA + ST++ S
Sbjct: 400 ---PDEALSAAKGVSTLTAGDVATPS---------------------------------- 422
Query: 298 SWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKI 357
PP +++ +L GPPG+GKTTL HV A HCGY V+EVNAS +R++S +E I
Sbjct: 423 ----------PPAERIAVLTGPPGVGKTTLVHVLAAHCGYEVIEVNASVERTASRLEAII 472
Query: 358 LDVVQMNSVMADSRPK------CLVIDEID-----GALGDGKG--AVEVILKMVSAERKS 404
V R + +V ++ LGD G + + +A S
Sbjct: 473 KTAVSAAGPAPGGRVRRPTASSAVVGAQVSALDHRAPLGDEAGYRGAALDAETAAASSWS 532
Query: 405 NTAKENVAKEDQPE--KISKKKGCKKAS---------LLRPVICICNDLYAPALRSLRQI 453
+T+ V +P+ I + G +S L RPV C+CNDL+ P+LR LRQ
Sbjct: 533 HTSSSLVHHLLRPKCLVIDEMDGIASSSVATYLIQQQLHRPVFCLCNDLFVPSLRPLRQR 592
Query: 454 AKVHVFIQPSV--SRVVSRLKHICNNE-SMKTSSIALTTLAEYTECDIRSCLNTLQFLD 509
HV+ P + R+++RL+ I E ++ S+AL+ L + + D+RSCLN +QF++
Sbjct: 593 CS-HVYYMPPIHPQRLLARLEEIARREGAVMFDSLALSELIKTSGGDVRSCLNAMQFIN 650
>gi|320583398|gb|EFW97611.1| hypothetical protein HPODL_0241 [Ogataea parapolymorpha DL-1]
Length = 684
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/258 (34%), Positives = 143/258 (55%), Gaps = 26/258 (10%)
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA 368
P+++VLL+ GPPG+GKT++AHV +K GY V E+NASD+R+ +T+++KI + ++ NS+
Sbjct: 152 PDRRVLLIHGPPGIGKTSIAHVISKQLGYEVREINASDERAGATVQDKIKNAMKNNSLTG 211
Query: 369 DSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKK 428
P CL++DEIDGA G + +++ +++ +R+ + + K ++
Sbjct: 212 S--PVCLILDEIDGA--TEHGFISILVDLINKDRRDTASL----------GLDTKGKTQR 257
Query: 429 ASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALT 488
L RP+I +CND+Y+P L LR + F + V S+LK IC E++ L
Sbjct: 258 EILKRPIIALCNDVYSPVLEKLRPHCETIAFRKSHPRLVKSKLKKICQREALVVDDRVLD 317
Query: 489 TLAEYTECDIRSCLNTLQFLDKKKEILNV------MDIGSQVVGRKDMSRSAFDIWKEIF 542
+ E TE D+R+C+N LQF + LN+ IG V+ RSA +E F
Sbjct: 318 AIIESTEGDLRNCINFLQF-NSSAATLNLESSSKDTQIGWFVLLDSIFVRSANISKQEQF 376
Query: 543 QKRKTKRLRNSVSSSSNV 560
QK + S+SSS+ V
Sbjct: 377 QK-----VFKSLSSSAQV 389
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 191 KPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSE 242
KP + +LW +KY P+ F +L+ +E+TNR++L W+ QW+ VFG T++
Sbjct: 97 KPSTY-KLWTEKYRPSGFLDLVGNERTNRQILQWINQWNQVVFGKPCAETTD 147
>gi|444323297|ref|XP_004182289.1| hypothetical protein TBLA_0I01110 [Tetrapisispora blattae CBS 6284]
gi|387515336|emb|CCH62770.1| hypothetical protein TBLA_0I01110 [Tetrapisispora blattae CBS 6284]
Length = 676
Score = 143 bits (361), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 113/429 (26%), Positives = 191/429 (44%), Gaps = 102/429 (23%)
Query: 195 HEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTI 254
H+QLWV+K+ P+ F +L+ +E+ NR +L W LR+ S++
Sbjct: 67 HDQLWVEKWRPHRFIDLVGNEKFNRRLLTW-----------------------LRQWSSV 103
Query: 255 SQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVL 314
K + S NR P +K+L
Sbjct: 104 VFQSKDTEPSIDFLNR--------------------------------------PVKKIL 125
Query: 315 LLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMAD---SR 371
L+ GPPG+GKT++AH+ AK GY +VE+NAS++R++ ++ + NS+ D S
Sbjct: 126 LIHGPPGIGKTSIAHIMAKQLGYSIVEINASNERNTQQLKLNL-----TNSLFHDNLFSN 180
Query: 372 PKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASL 431
P CL+ DEIDGA G ++++L+++ +++++ +++K K L
Sbjct: 181 PTCLIADEIDGA--QDSGLIKLLLEILHSDKRAT--------------LTRKNSKKNKLL 224
Query: 432 LRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLA 491
RP++ ICN++Y+ +L L+ ++ +P S ++ RL+ I E + S AL +
Sbjct: 225 KRPIVAICNNIYSHSLERLKPFCEIIPLRKPLDSAIIERLQLIAQKEHLSLSLQALKDII 284
Query: 492 EYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLR 551
++ DIR+C+N LQF N D V KD + + F I IFQK
Sbjct: 285 ISSQGDIRNCINNLQF----NANTNARDPS---VSHKDFNNTWFKIVNSIFQK------- 330
Query: 552 NSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNS 611
+ + +F L IS G+++ I G H ++Y D + K D L
Sbjct: 331 ---NLHLDYKLQFQNLTKTISLNGNFEKIIQGCHTLYPTMKYSDISLQKPALISDWLYFH 387
Query: 612 DLMHQYIMR 620
DL + +
Sbjct: 388 DLCQNSLFQ 396
>gi|345312342|ref|XP_001519056.2| PREDICTED: chromosome transmission fidelity protein 18 homolog,
partial [Ornithorhynchus anatinus]
Length = 478
Score = 143 bits (360), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 99/245 (40%), Positives = 134/245 (54%), Gaps = 36/245 (14%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LWVD++ P +T+LLSD+ TNR +L WLK WD VFG E +R +++
Sbjct: 269 LWVDRFTPQRYTDLLSDDYTNRCLLKWLKLWDLVVFGRE---------KPAKRAKPVAEP 319
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
+ ++ R+ +G +W + LE E +K P+ KV LLC
Sbjct: 320 RAPAKAA--REQQG-KWKSKEQLTEEILEAELDQTKR--------------PKHKVALLC 362
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM-ADSRPKCLV 376
GPPGLGKTTLAHV AKH GY+VVE+NASDDRS + +I QM SV+ A +P CL+
Sbjct: 363 GPPGLGKTTLAHVIAKHAGYNVVEMNASDDRSPDIFKTRIEAATQMKSVLGAHEKPNCLI 422
Query: 377 IDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVI 436
IDEIDGA A+ V+L +++ RK E + K ++ G LLRP+I
Sbjct: 423 IDEIDGA---PTPAINVLLNILN--RKDTKDVETASGGPGSRKRRREGGL----LLRPII 473
Query: 437 CICND 441
CICND
Sbjct: 474 CICND 478
>gi|358369511|dbj|GAA86125.1| sister chromatid cohesion factor [Aspergillus kawachii IFO 4308]
Length = 947
Score = 142 bits (358), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 202/856 (23%), Positives = 324/856 (37%), Gaps = 234/856 (27%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
+W +KY FTEL+ DE+T+R VL WLK W+ VF + R+ +++
Sbjct: 216 MWTEKYRARKFTELIGDERTHRSVLRWLKAWEPIVFPNIARAKAKKPF------------ 263
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
N K ++ H+K VLLLC
Sbjct: 264 ---------------------------------NGKEEEERTHRK----------VLLLC 280
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILD------VVQMN------S 365
GPPGLGKTTLAHV A+ GY V+E+NASDDRS ++ +I D V MN
Sbjct: 281 GPPGLGKTTLAHVCARQAGYEVLEINASDDRSKDVVKGRIRDSLGTENVKGMNVEVGEEK 340
Query: 366 VMADSRPKCLVIDEIDGALGDGKGA-----VEVILKMVSAERKSNTAKENVAKEDQPEKI 420
V RP C+V+DE+DG + G ++ ++ +V ++K+++ K
Sbjct: 341 VRKAGRPVCVVVDEVDGVVSGSGGGGEGGFMKALIDLVLLDQKNSSGATEQTK------- 393
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLR--QIAKVHVFIQPSVSRVVSRLKHICNNE 478
+KK LRP+I +CND+Y P+LR LR +A++ Q + VV+R+K I E
Sbjct: 394 GRKKKGDNFRFLRPLIMVCNDVYHPSLRPLRAASVAEIIHVRQAPLENVVTRMKRIFTVE 453
Query: 479 SMKTSSIALTTLAEYT-----------------ECDIRSCLNTLQFLDKK---------- 511
+ + + + L E + E DIRS L +++ K
Sbjct: 454 GIPSDNDGVRRLCEASWGLARRKQGGVKSSGTAEGDIRSVLVAAEWVAHKLRNECPSTLR 513
Query: 512 -------KEILNVMDIGSQVVGRKDMSRSAF-DIWKEIFQKRK--------TKRLRNSVS 555
+++L+ GS K ++R D+ + +F + R+ S
Sbjct: 514 LTRSWLEQKVLSANSSGSAFF--KGLNRGGVRDLIERVFTEGAGFTDAPVGVDSFRDPFS 571
Query: 556 SSSN----------VSNEFDFLHSLISNRGDYD-VIFDGIHENILQLQYHDPVMLKTVKC 604
S + + + L ++ G++D + + LQ D + K
Sbjct: 572 HSEDKVPVGVADLRKRHAIERLREMVDASGEHDRAVAECFASYPLQSYQDDTFLSKPNAA 631
Query: 605 LDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQ---KP------NLEWPKSY 655
D L D M + Q L Y + H L + Q KP E P S
Sbjct: 632 YDWLHFHDTMSSKVYTAQDWELSAYLSQSVVAFHHLFATAQGKAKPREVDDEEEEHPFSG 691
Query: 656 QRYRNAFMEKMD----IFKSWHSKIPPYISRHL-STESLVEDSISPLLHILSPPTLRPVA 710
R A E I + S +SR ST+SLV D I L+ +LS P ++PV
Sbjct: 692 PRADFAAYEAQKQNRAILTEFQSAFSAPLSRLFRSTDSLVIDLIPNLVRMLS-PDVKPVV 750
Query: 711 LH----------LLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLS 760
+ + E+ + V M + ++ + + N G +H
Sbjct: 751 VRGSGEQRSVASVRKESERTLIQAAVRVMAGLGVRFEKVR----IENAG---AHGGWAYR 803
Query: 761 FDPPINEFITFKGYRSNHYV-----LALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKE 815
+PP++ ITF +S + A++QVL E K+ I +
Sbjct: 804 MEPPLDTLITFSKTKSTPTASGSAPVRYAIRQVLDQEYRKENIRK--------------- 848
Query: 816 NMDLAGEEDSKTESAKTNNAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASV 875
++E+ T+N S TA
Sbjct: 849 ----------QSETLTTSNIG-----------------------------KKSSGKTADG 869
Query: 876 KPKSSGDTKKSFRSSS---SFFDRFRKLSGKVSQDN--DNAVQKATVERDSLPLLFKFNE 930
+ K GD KK+ + FF R K D + A Q T++ + +++
Sbjct: 870 QSKDDGDAKKTAHGPNVKRDFFGRVIKEPTPPPSDESPETAKQNETLKAGRR-VWVTYHD 928
Query: 931 GFTNAVKRPVRMRDFL 946
GF+NAV++P+ M + L
Sbjct: 929 GFSNAVRKPISMGELL 944
>gi|123412361|ref|XP_001304045.1| ATPase, AAA family protein [Trichomonas vaginalis G3]
gi|121885470|gb|EAX91115.1| ATPase, AAA family protein [Trichomonas vaginalis G3]
Length = 603
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 193/434 (44%), Gaps = 110/434 (25%)
Query: 188 LPEKPV----VHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEE 243
+P KP+ V E +++Y P ++T+L+SDE+TNR+VL +W
Sbjct: 60 IPPKPIEEINVSETNLINEYTPKTYTDLISDERTNRQVL----EW--------------- 100
Query: 244 VLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKT 303
RH F+N+ + + +K + D K +
Sbjct: 101 -----MRH---------------------------FQNAKSERKKPKRTKKLVD-LTKNS 127
Query: 304 RSTGPPEQ--KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVV 361
+ P Q +LLL GPPG GKTTL + AKHCG+H VE+NASDD S + + + +
Sbjct: 128 KFEQPTIQLSHILLLAGPPGSGKTTLIRIIAKHCGFHTVELNASDDASVDRNQMILQNQL 187
Query: 362 QMNSVMADSRPKCLVIDEIDGALGDGKGAV-EVILKMVSAERKSNTAKENVAKEDQPEKI 420
V +V +E+DG G + + +LK ++
Sbjct: 188 NFEPVFGAKTKPLMVFEELDGI-----GTISDSVLKAITGNAS----------------- 225
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
RPV+ I ND YA +L+++R IA P+ ++ R+++IC NE +
Sbjct: 226 ------------RPVVIIVNDGYAQSLKNIRSIATFIKLPPPNSTQFKERIRYICKNEEI 273
Query: 481 KTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKE 540
S+ A+ +AE ++ DIR+ LNT+ FL + ++ ++ + VG K+ S + FD+W
Sbjct: 274 DISTQAINEVAEISKYDIRTALNTISFL-RARQPISADTVHLLPVGLKNSSLTPFDVWTT 332
Query: 541 IFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLK 600
+F K S + +NE + G+ +I GI EN+ ++ DP +
Sbjct: 333 LFTASK---------SFKDCANEVEIF-------GNTRLISTGILENLENIRNADPTRKR 376
Query: 601 TVKCLDCLGNSDLM 614
V+ D L +D++
Sbjct: 377 LVEMFDNLCYADVL 390
>gi|255554166|ref|XP_002518123.1| hypothetical protein RCOM_1020410 [Ricinus communis]
gi|223542719|gb|EEF44256.1| hypothetical protein RCOM_1020410 [Ricinus communis]
Length = 170
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/162 (54%), Positives = 113/162 (69%), Gaps = 6/162 (3%)
Query: 788 VLVHEVEKQRIMQVTIGKSEHLADG-YKENMDLAGEEDSKTESAKTNNAAVSAKLIEKSK 846
+ V VEK++I+QV+ +S HL DG KEN+DLA + SK +SA ++ ++SA IE
Sbjct: 13 LFVILVEKEKILQVS--RSAHLTDGGSKENLDLANGKHSKLQSA-NDSTSLSASKIETRN 69
Query: 847 SLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDRFRKLSGKVSQ 906
+L QC ST + LD S+SST+S+K KS G++K S+SFFDRFRK+S K S
Sbjct: 70 NLLNRHQCKTGDSTKPSNLDFSKSSTSSMKLKSPGNSKPC-TGSTSFFDRFRKVSSKSSP 128
Query: 907 DNDNAVQKAT-VERDSLPLLFKFNEGFTNAVKRPVRMRDFLL 947
+ D AVQK T +ERD PLLFKFNEGFTNAVKRPVRMR+FLL
Sbjct: 129 NTDIAVQKTTTLERDLRPLLFKFNEGFTNAVKRPVRMREFLL 170
>gi|340517652|gb|EGR47895.1| predicted protein [Trichoderma reesei QM6a]
Length = 939
Score = 140 bits (352), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 117/376 (31%), Positives = 176/376 (46%), Gaps = 88/376 (23%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LW +KY +F +L D+ TNR VL WLK+WD VF T++ A RR+ Q
Sbjct: 181 LWTEKYRARNFMDLCGDDGTNRLVLRWLKRWDPLVF----PGTAKAKPKAARRNGAHPQP 236
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
+++ P +K+L+L
Sbjct: 237 EEEK-----------------------------------------------PHRKILMLT 249
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS------- 370
GPPGLGKTTLAHV AK GY V+EVNASDDRS ++N+I + SV S
Sbjct: 250 GPPGLGKTTLAHVCAKQAGYEVIEVNASDDRSRDVVKNRIRTSLGTESVKNVSNLKAANG 309
Query: 371 -----RPKCLVIDEI------DGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEK 419
+P C+V+DE+ GA G+G G ++ ++ +V ++K+++ E +
Sbjct: 310 PQKVAKPACVVVDEVDGVVTGSGASGEG-GFIKALIDLVLIDQKNSSGVEKSY-----DG 363
Query: 420 ISKKKGCKKASLLRPVICICNDLYAPALRSLRQ--IAKVHVFIQPSVSRVVSRLKHICNN 477
I KKKG L+RP+I ICND+Y P+LR LRQ +A++ +P++ VV RLK +
Sbjct: 364 IKKKKG-DDFRLMRPLILICNDVYHPSLRPLRQSNLAEIIHVGRPTLDTVVGRLKTVFEK 422
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQFLDK--KKEILNVMDIGS------QVVGRKD 529
E + A L E T + S ++ + + + ++ VM +G + GR D
Sbjct: 423 EGIPCDKDAARKLCE-TAWGMASGIDAKRGQESTVQGDLRGVMVVGEWAASRFRASGRSD 481
Query: 530 MSRSAFD-IWKEIFQK 544
R + I K I Q+
Sbjct: 482 TQRLTREWIEKNILQE 497
>gi|261329930|emb|CBH12913.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 993
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 203/906 (22%), Positives = 332/906 (36%), Gaps = 257/906 (28%)
Query: 196 EQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTIS 255
+ LWV KY P F +LLSD+ TN ++L W+K
Sbjct: 189 DSLWVIKYTPKRFRDLLSDDTTNLKLLQWMKS---------------------------- 220
Query: 256 QNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLL 315
W FRN + + G+ S TR P+ ++ +
Sbjct: 221 ------------------WDEYTFRNG-----ASPGADGLSSS--PSTR----PDDRIAV 251
Query: 316 LCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKI-LDVVQMNSVMADSR--- 371
L GPPG+GKTTLAHV A HCGY +E+NAS DR++S IE+ I L V S R
Sbjct: 252 LVGPPGVGKTTLAHVLALHCGYEPIEINASVDRTASGIESAIQLAVSPGRSRRRAQRPAV 311
Query: 372 --------------------PKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENV 411
PKCL+IDE+DG ++A S K+++
Sbjct: 312 PTSNGGNGGSVTSLVDMLMLPKCLIIDEMDG---------------IAANFASFLLKQDI 356
Query: 412 AKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSV--SRVVS 469
C PV+C+CND Y P+LR LRQ ++ VF P + R++
Sbjct: 357 H-------------C-------PVLCLCNDYYVPSLRLLRQQCRL-VFHVPPIRPQRLLQ 395
Query: 470 RLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDK----------KKEILNVMD 519
RL I +E++K + L L + D+R CLNTLQF + +++ D
Sbjct: 396 RLGEIAEHENIKVADAVLAELVRASNGDVRCCLNTLQFAYRCVVSDTGETPQQQHKRQQD 455
Query: 520 IGSQVVGRKDMSRSAFDIWKEIFQK----------------------------------- 544
+ ++ G KDM + +D+W+ + ++
Sbjct: 456 LLREMQG-KDMKLNLWDMWRVVLERQDRGKYVQLLRKEFAMNYDAVVMAGCANPLPLSSY 514
Query: 545 RKTKRLR--------NSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDP 596
++T++L+ V++ V + ++ ++ D + + DG+HE L+ Y D
Sbjct: 515 QQTQQLQVDMDVAEEGYVATGFRVDPGYTYVSRVLQWCDDTNGLLDGLHEFYLRRSYTDY 574
Query: 597 VMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQ---PPLAITVHRLVSQIQKPN----L 649
L T D D + R + + Q A + S + + +
Sbjct: 575 SFLNTCAVSDAFSFQDCLTTTGYRHTPLLPFAEQYGKSATATSCFSCCSAMGRGSSITAS 634
Query: 650 EWPKSYQRYRNAFMEKMDIFKSWHSKIPPY-ISRHLSTESLVEDSISPLLHILSPPTLRP 708
+P++ E I + ++ HL + + + + + LL L
Sbjct: 635 GFPRAAATAARRRDESFHITRMVRDNCRSLEVASHLYSTTAITEVVPSLLRCLC-----D 689
Query: 709 VALHL----------LSAKEKNDLAQLVSAMVSYSLTY-KNTKSDPLLNNLGNE----VS 753
V+LH+ L+ K++ L V+ Y TY + T+ P + G++ V+
Sbjct: 690 VSLHIPSHTVASGVGLTPKDQQLLRAAVARHALYGFTYVRTTRGRPGNHRRGSDEPDHVA 749
Query: 754 HDVSTLSFDPPINEFIT----------FKGYR------SNHYVLAL----AVKQVLVHEV 793
+ DPPI+ G R S+ V+ L VKQ+LV E+
Sbjct: 750 EEEEHWELDPPIHRICCASLSEAQQERMPGQRPAVRDTSSSSVMVLHMKEEVKQLLVGEI 809
Query: 794 EKQRIMQVTIGKSEHLADGYKENM----DLAGEEDSKTESAKT-------NNAAVSAKLI 842
+ I ++ + K+N ++ + DS S K K
Sbjct: 810 HRHIIQTSSLRAVRNHGGARKDNTGGTDEIVVKRDSTLPSRKRERDDEIDGREIKVKKEE 869
Query: 843 EKSKSLPYSRQCNPSTSTVLTT-LDSSRSSTASVKPKSSG----------DTKKSFRSSS 891
EK +P T T +T + + P++ G +K +
Sbjct: 870 EKFSGVPKPADGMHGTRTGVTVKREEDAAEMCGCSPQAEGPKAAVSAALSSSKPAQTVLK 929
Query: 892 SFFDR------------FRKLSGKVSQDNDNAVQKATVERDSLPLLFKFNEGFTNAVKRP 939
FF R F K G+ D NA ++ L + + + EG TN VK P
Sbjct: 930 DFFGRPIAAKPKGMPLAFSKAKGENVVDLSNAGAHGRAKK--LTVQYIYKEGCTNGVKIP 987
Query: 940 VRMRDF 945
+ DF
Sbjct: 988 ASLNDF 993
>gi|170586004|ref|XP_001897771.1| hypothetical protein Bm1_31625 [Brugia malayi]
gi|158594795|gb|EDP33374.1| hypothetical protein Bm1_31625 [Brugia malayi]
Length = 730
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 157/639 (24%), Positives = 271/639 (42%), Gaps = 144/639 (22%)
Query: 194 VHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHST 253
+ + LWV+KYAP+++ +L+SDE NR +L WL+ WD CVF H
Sbjct: 197 IQDNLWVEKYAPHTYADLISDETVNRLLLNWLRLWDECVF-----------------HKV 239
Query: 254 ISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKV 313
+S + + + SN + I S K R P KV
Sbjct: 240 VS---------------------------DIVLRDASNQQQIILSNEKPRR----PSHKV 268
Query: 314 LLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM-ADSRP 372
+LL GP G GKTTLA + A+H GY VV +NASD+R+++ + D ++ + ADS+P
Sbjct: 269 VLLAGPAGTGKTTLATLVAQHVGYRVVSLNASDERNTADFKKCFEDALRTTRTLDADSKP 328
Query: 373 KCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCK-KASL 431
CL++DEIDGA ++ + K V+A + + ISK + + ++S
Sbjct: 329 NCLILDEIDGA---PTQSIHYLCKAVAA----------IGRHALRRPISKLEHLRVESSA 375
Query: 432 LRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLA 491
L +I +C+ R LR ++ L+ I + K A+
Sbjct: 376 LSEIIAVCS-------RDLRS--------------AINNLQFIASRNCTKVDRKAV---- 410
Query: 492 EYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLR 551
L+F +++K+ + +S FD W IF+ +
Sbjct: 411 -------------LKFCNREKQFGD---------------KSLFDSWASIFEISRHLDAN 442
Query: 552 NSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNS 611
+ ++ + + L N + D + G+ N L+ + V++ T + L
Sbjct: 443 GRIQGVASRVKQITLISELHGN--ETDRFYLGLFANYLKSK-SATVLMNTAMAIHQLCYY 499
Query: 612 DLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKS 671
D + Q L Y + I++H L+ + +L +P Y + + ++I +S
Sbjct: 500 DRIVTSANSVQDYSLLKYLSAVCISMHMLLCCRGRTHLSFPTDYHSAVQRYEQSVEIIES 559
Query: 672 WHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVS 731
+ ++LS ++ + I P L + P +P+ + L S +E N L ++S M +
Sbjct: 560 MRAGAA---QKNLSLSTIALE-ILPYLISIVQPDFKPMNVQLYSVRELNVLHSIISIMRT 615
Query: 732 YSLTYKNTKSDPLLNNLGNEVSHDVS-TLSFDPPINEFITFK---GYRSNHY--VLALAV 785
YSLTY + V HD S + F P I + + F SN L++A
Sbjct: 616 YSLTYAS-------------VLHDESVSFVFKPAIEQLVMFTDDDACCSNRSPNTLSVAA 662
Query: 786 KQVLVHEVEKQRIMQVTIGKSEHLAD--GYKENMDLAGE 822
+Q++ HE+E +++ V SE A+ G KE + +G+
Sbjct: 663 RQLIAHEIELEKVRNVDALASEIAANLPGKKEELIKSGK 701
>gi|296812297|ref|XP_002846486.1| chromosome transmission fidelity protein 18 [Arthroderma otae CBS
113480]
gi|238841742|gb|EEQ31404.1| chromosome transmission fidelity protein 18 [Arthroderma otae CBS
113480]
Length = 954
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 153/318 (48%), Gaps = 79/318 (24%)
Query: 197 QLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQ 256
+LW +KY SF +L+ D++T+R VL WLK WD VF + +++
Sbjct: 198 RLWTEKYRARSFKDLIGDDRTHRTVLRWLKAWDPIVFPGLAKPKAKK------------- 244
Query: 257 NKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLL 316
GNF N + ++ H+K +LLL
Sbjct: 245 --------------------GNFPNES------------EERTHRK----------ILLL 262
Query: 317 CGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-------- 368
GPPGLGKTTLAH+ AK GY V+E+NASD+RS + + +I D V +V
Sbjct: 263 TGPPGLGKTTLAHICAKQVGYDVLEINASDERSRTVVTGRIKDAVGTENVKGVTVVEDGK 322
Query: 369 ----DSRPKCLVIDEIDGALGDGKGA-----VEVILKMVSAERKSNTAKENVAKEDQPEK 419
+P C++IDE+DG + G ++ ++ +V +++++T + K
Sbjct: 323 VIRKPGKPVCVIIDEVDGVVSGSGGGGEGGFMKALIDLVQLDQRNSTRSKTDGHGTG--K 380
Query: 420 ISKKKGCKKASLLRPVICICNDLYAPALRSLRQ--IAK-VHVFIQPSVSRVVSRLKHICN 476
SKKKG K LLRP+I ICND+Y P+LR LRQ IA+ +HV P +VV R+K I
Sbjct: 381 NSKKKG-DKFRLLRPLILICNDVYHPSLRPLRQASIAEIIHVRRVP-FDQVVQRVKSIFE 438
Query: 477 NESMKTSSIALTTLAEYT 494
E ++ + L E T
Sbjct: 439 KEGIQCDADGARKLCEIT 456
>gi|296084055|emb|CBI24443.3| unnamed protein product [Vitis vinifera]
Length = 104
Score = 139 bits (349), Expect = 1e-29, Method: Composition-based stats.
Identities = 63/87 (72%), Positives = 75/87 (86%)
Query: 455 KVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEI 514
+VH+F+QP VSRVVSRLK++CN E +KT+S AL LAEYTECDI SCLNTLQFL+KK +
Sbjct: 17 RVHIFVQPIVSRVVSRLKYMCNMEGLKTNSTALVALAEYTECDICSCLNTLQFLNKKNQT 76
Query: 515 LNVMDIGSQVVGRKDMSRSAFDIWKEI 541
LNV +I SQVVG+KDMSRS FDIWKE+
Sbjct: 77 LNVFEISSQVVGQKDMSRSIFDIWKEV 103
>gi|255931811|ref|XP_002557462.1| Pc12g06190 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582081|emb|CAP80246.1| Pc12g06190 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1051
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 196/871 (22%), Positives = 310/871 (35%), Gaps = 256/871 (29%)
Query: 194 VHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHST 253
+ +W +KY FT+L+ DE+T+R VL WLK W+ VF +S ++
Sbjct: 316 IDSAMWTEKYRARKFTDLIGDERTHRSVLRWLKGWEPIVFPGLAKSRPKK---------- 365
Query: 254 ISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKV 313
S +G ++ H+K V
Sbjct: 366 ------------------------------------STQEGEEEYTHRK----------V 379
Query: 314 LLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA----- 368
LLL GPPGLGKTTLAHV A+ GY V+E+NASDDRS ++ +I D + +V
Sbjct: 380 LLLSGPPGLGKTTLAHVCARQAGYEVLEINASDDRSRDVVKGRIRDALGTENVKGMNVEI 439
Query: 369 -------DSRPKCLVIDEIDGALGDG---------KGAVEVILKMVSAERKSNTAKENVA 412
+P C+V+DE+DG G K ++++L +R S + E
Sbjct: 440 GNKKVRRAGKPVCVVVDEVDGVTGGSGSGGEGGFMKALIDLVLL---DQRNSKLSSEG-- 494
Query: 413 KEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLR--QIAKVHVFIQPSVSRVVSR 470
KK+ +RP+I +CNDLY +LR LR IA++ Q + VV R
Sbjct: 495 ------NNGKKRKGDNFRFMRPLILVCNDLYHSSLRPLRTSSIAEMINVRQAPLENVVQR 548
Query: 471 LKHICNNESMKTSSIALTTLAEY-----------------TECDIRSCLNTLQFLDKK-- 511
+K I E + S L E E DIRS L +F+ K
Sbjct: 549 VKVIFGREGIPCDSDGARRLCEAAWGMAARKKRSAKSQGSAEGDIRSVLVAAEFVAHKLR 608
Query: 512 ----------------KEILNVMDIGSQVVGRKDMSRSAF-DIWKEIFQKRKT------- 547
+LN GS K+MSR +I +F +
Sbjct: 609 NESLPSSLRLTRNWLETRVLNASAEGSSAF-FKEMSRGGVREIVNRVFTEGAGFSDAPVG 667
Query: 548 ----KRLRNSVS------SSSNVSNEFDFLHSLISNRGDYD-VIFDGIHENILQLQYHDP 596
R N S + + + L +I + GD+D + D +Q D
Sbjct: 668 MSFQDRFDNPSSRVPLGVADLRKRHAINRLREMIDSSGDHDRCVSDCFASYPIQQYQDDN 727
Query: 597 VMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQI------------ 644
K D L D + + +Q+ L Y + H L +
Sbjct: 728 YFSKPNAAHDWLHFHDSISSKVHSSQEWELIPYLSQSVVAFHHLFATATGRTTDDDKNDD 787
Query: 645 ----QKPN-LEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHL-STESLVEDSISPLL 698
++P+ PK+ A + ++H+ ++R STES++ D + L+
Sbjct: 788 DEEAEEPHPFSGPKADFAAFEAQKQNRAAMAAFHASFSAPMARIFRSTESIITDLVPYLI 847
Query: 699 HILSPPTLRPVALH----------LLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNL 748
+LS P ++PV + + E+ + V M + ++ + +
Sbjct: 848 RMLS-PDIKPVVIRGNGEQRSTATVRKDSERALVQSTVRVMTGMGVAFEKVRVE------ 900
Query: 749 GNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLA-------LAVKQVLVHEVEKQRIMQV 801
+E SH +PPI+ + F + + + AV+QVL E K + +
Sbjct: 901 -HEGSHGGWAYRMEPPIDSLVVFSKIKGSTIEASGGTAPVRYAVRQVLDQEYRKATMRKQ 959
Query: 802 T--IGKSEHLADGYKENMDLAGEEDSKTESAKTNNAAVS----AKLIEKSKSLPYSRQCN 855
T IG S G K + + D T + AAV +LIE+ P
Sbjct: 960 TDAIGASR---VGIKSDKN----SDDTTAAKAIKEAAVKRDFFGRLIEQPAPQP------ 1006
Query: 856 PSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDRFRKLSGKVSQDNDNAVQKA 915
K S+ + D K KV
Sbjct: 1007 -----------------------------KDLNSADGWADESSKAGRKV----------- 1026
Query: 916 TVERDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
F+EGF+NAV++P+ M + +
Sbjct: 1027 ---------WVTFHEGFSNAVRKPISMGELM 1048
>gi|46121897|ref|XP_385502.1| hypothetical protein FG05326.1 [Gibberella zeae PH-1]
Length = 929
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 153/608 (25%), Positives = 244/608 (40%), Gaps = 153/608 (25%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LW +KY +F +L D+ TNR VL WLK+WD VF E +S A RR T Q
Sbjct: 182 LWTEKYRARNFMDLCGDDATNRFVLRWLKKWDPVVFPGESKSQP-----AARRPGTKQQE 236
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
+++ P +K+L+L
Sbjct: 237 EEEK-----------------------------------------------PHRKILMLT 249
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS------- 370
GPPGLGKTTLAHV A+ GY V+E+NASDDRS ++N+I + SV S
Sbjct: 250 GPPGLGKTTLAHVCARQAGYEVMEINASDDRSRDVVKNRIRTSLGTESVKTVSNRTDGNG 309
Query: 371 -----RPKCLVIDEIDGALGDGKGA-----VEVILKMVSAERKSNTAKENVAKEDQPEKI 420
+P C+++DE+DG + G+ V+ ++ +V ++K+ + A +
Sbjct: 310 PQKLAKPACVIVDEVDGVVSGSGGSGEGGFVKALIDLVLLDQKNGSGN---ASSNNYGNK 366
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQ--IAKVHVFIQPSVSRVVSRLKHICNNE 478
KKKG LLRP+I ICND+YAPALR LRQ +A++ +P++ VV+RLK + E
Sbjct: 367 KKKKG-DDFRLLRPLILICNDVYAPALRPLRQSNLAEIIHVGKPTMESVVARLKSVFEKE 425
Query: 479 SMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKE--ILNVMDIGSQVVGR--------- 527
+ A L E + S ++ + + E + VM +G V GR
Sbjct: 426 GIPCDKDASRKLCE-AAWGMTSGIDAKRGAESTVEGDLRGVMVVGEWVAGRFRASALNGT 484
Query: 528 -------------KDMSRSAF-----------DIWKEIFQK-----RKTKRLRNSVSSSS 558
+D++ A DI +FQ+ ++ S +
Sbjct: 485 ARLTRQWLESNVLQDLTSGAGGARGLGRGGVKDIVSRLFQEGGGFPKQAMDFSQSKTQHE 544
Query: 559 NVSNEFDF-----------LHSLISNRGDYDVIFDGIHENILQLQYHDPVML-KTVKCLD 606
E F L +I G+ I + Y+D + L K + +
Sbjct: 545 QPQAELGFGEFQKKHAMERLRQMIDTSGEISHIMTEVFAEYPNRDYNDDLYLTKPCQAYE 604
Query: 607 CLGNSDLMHQYIMRTQQMPL--YVYQPPLAITVHRLVSQIQK------------------ 646
L D + +Q+ L Y+ QP LA H L + ++
Sbjct: 605 WLHFHDTCQSRLYASQEWELAQYLSQPVLA--CHHLFASPKRYIPSTGYDRRWGGDAEDE 662
Query: 647 -PNLEW--PKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSP 703
P L + P++ + A + ++ +++PP + R + V P L +
Sbjct: 663 GPPLPFSGPRADYQAHEAERQNRAQLQAMQAQLPPTLMRSFRSAEEVSAEFLPYLARIVS 722
Query: 704 PTLRPVAL 711
P ++PV +
Sbjct: 723 PDVKPVVV 730
>gi|72392000|ref|XP_846294.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175320|gb|AAX69464.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70802830|gb|AAZ12735.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 993
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 165/386 (42%), Gaps = 130/386 (33%)
Query: 196 EQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTIS 255
+ LWV KY P F +LLSD+ TN ++L W+K
Sbjct: 189 DSLWVIKYTPKRFRDLLSDDTTNLKLLQWMKS---------------------------- 220
Query: 256 QNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLL 315
W FRN + + G+ S TR P+ ++ +
Sbjct: 221 ------------------WDEYTFRNG-----ASPGADGLSSS--PSTR----PDDRIAV 251
Query: 316 LCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQ------------- 362
L GPPG+GKTTLAHV A HCGY +E+NAS DR++S IE+ I V
Sbjct: 252 LVGPPGVGKTTLAHVLALHCGYEPIEINASVDRTASGIESAIQLAVSPGRSRRRVQRPAV 311
Query: 363 -----MNSVMADSR------PKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENV 411
N A S PKCL+IDE+DG ++A S K+++
Sbjct: 312 PTSNGGNGGSATSLVDMLMLPKCLIIDEMDG---------------IAANFASFLLKQDI 356
Query: 412 AKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSV--SRVVS 469
C PV+C+CND Y P+LR LRQ ++ VF P + R++
Sbjct: 357 H-------------C-------PVLCLCNDYYVPSLRLLRQQCRL-VFHVPPIRPQRLLQ 395
Query: 470 RLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDK----------KKEILNVMD 519
RL I +E++K + L L + D+R CLNTLQF + +++ D
Sbjct: 396 RLGEIAEHENIKVADAVLAELVRASNGDVRCCLNTLQFAYRCVVSDTGETPQQQHKRQQD 455
Query: 520 IGSQVVGRKDMSRSAFDIWKEIFQKR 545
+ ++ G KDM + +D+W+ + +++
Sbjct: 456 LLREMQG-KDMKLNLWDMWRVVLERQ 480
>gi|451849211|gb|EMD62515.1| hypothetical protein COCSADRAFT_121269 [Cochliobolus sativus
ND90Pr]
Length = 1079
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 164/378 (43%), Gaps = 109/378 (28%)
Query: 179 SSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIR 238
S G+S R+L +W +KY FT+L+ DE+T+R VL WLK WD VF ++
Sbjct: 333 SKSGKSSRTL---------MWTEKYRAKKFTDLVGDERTHRSVLRWLKAWDPIVFPGSVK 383
Query: 239 STSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDS 298
+ ++ ++N + D RK
Sbjct: 384 AKPKK-----------AKNGFEEDEQRHRK------------------------------ 402
Query: 299 WHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKIL 358
+LLL GPPGLGKTTLAHV A+ GY V E+NASD+RS + ++ +I
Sbjct: 403 --------------ILLLTGPPGLGKTTLAHVCARQAGYEVQEINASDERSGNVVKGRIR 448
Query: 359 DVVQMNSVMADSRPKCLVIDEIDGALGDGK---------------------------GAV 391
D+V +V I+ + DGK G +
Sbjct: 449 DMVGTENVRG-----------INTSTADGKVRKAGKPVCVVVDEVDGVVGSGGSGEGGFI 497
Query: 392 EVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLR 451
+ ++ +++ + K++ A + Q +KKKG K LLRP+I ICNDLY P+LR LR
Sbjct: 498 KALIDLINLDEKNSKA----LGQGQSNTGTKKKG-DKFRLLRPLILICNDLYHPSLRPLR 552
Query: 452 Q--IAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLD 509
Q +A++ +P ++ VVSR++ I N E ++ S + L E T
Sbjct: 553 QSSLAEIVHIRKPGLNMVVSRMQDIFNKEGIQCDSDGVRRLCEATWGVSTKKEGGTGSGT 612
Query: 510 KKKEILNVMDIGSQVVGR 527
+ +I +M + + GR
Sbjct: 613 GEGDIRGIMVVSEWIAGR 630
>gi|320593201|gb|EFX05610.1| sister chromatid cohesion factor [Grosmannia clavigera kw1407]
Length = 1061
Score = 137 bits (345), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 152/618 (24%), Positives = 237/618 (38%), Gaps = 161/618 (26%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LW +KY SF +L+ D+ TNR VL WLK+WD+ VF H+
Sbjct: 270 LWTEKYRARSFMDLVGDDLTNRLVLKWLKRWDAVVFP----------------HA----- 308
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
+ G R N++ +S+ G D ++ + +K+L+L
Sbjct: 309 -----------------AKGRRRPGNSVH--SSSGSGALDGQQQQAGNEERAHRKILILT 349
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV----------- 366
GPPGLGKTTLAHV A+ GY V+E+NASDDRS + +I + SV
Sbjct: 350 GPPGLGKTTLAHVCARQAGYDVLEINASDDRSRDVVNGRIRTSLGTESVKTIEHVTSRPV 409
Query: 367 ---------------MADS-------------RPKCLVIDEIDGALGDGKGA-----VEV 393
+A S RP C+++DE+DGA+G V+
Sbjct: 410 TKAKAAGAGTGGFSLLAASTAAVERTGPAKVARPVCVIVDEVDGAVGGSGATGEGGFVKA 469
Query: 394 ILKMVSA-ERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQ 452
++ +V +R S +A + + ++K RP+I ICND+Y PALR LRQ
Sbjct: 470 LMDLVLVDQRNSGSATAATTGNKRKKDDFRQK--------RPLILICNDVYHPALRPLRQ 521
Query: 453 --IAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEY----------------- 493
+A+V +PS VV RLK I E + A L E
Sbjct: 522 SGLAEVVHVGKPSAETVVVRLKSIFEKEGITCEKEAARKLCEAAWGMGADGQESRRGTES 581
Query: 494 -TECDIRSCLNTLQFLDKKKEILNVM------DIGSQVVGRKDMSRSAF----------- 535
E D+R + +++ ++ L M + Q V + M+ A
Sbjct: 582 TAEGDLRGVMVVGEWVARR---LRAMTDSARPQLTRQWVNQNVMADMAHGSGGGGGVGAR 638
Query: 536 --------DIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHEN 587
+I +FQ+ S + L ++ GD D I +
Sbjct: 639 GLGRGGVREIVSRVFQEGGGFPKTGGGSGWTCQQR----LREMVETSGDVDRIMTEVFAE 694
Query: 588 ILQLQYHDPVML-KTVKCLDCLGNSDLMHQYIMRTQQMPLYVY--QPPLAITVHRLVSQI 644
+++D + L K + L DL + + +Q+ L Y QP LA S+
Sbjct: 695 YPNREFNDDLYLSKPDSAYEWLHFHDLCSRRVFGSQEWELMAYTSQPVLACHELFATSRR 754
Query: 645 QKPNLE-------------WPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVE 691
P E P++ R A + ++ +++PP + R L + V
Sbjct: 755 HMPAGEGADGGSSTASVFSGPRADFAAREAEKQSRAALQAIQAQLPPSLLRALRSAEDVA 814
Query: 692 DSISPLLHILSPPTLRPV 709
P L L P ++PV
Sbjct: 815 VDFLPYLVRLVSPDVKPV 832
>gi|408393260|gb|EKJ72525.1| hypothetical protein FPSE_07162 [Fusarium pseudograminearum CS3096]
Length = 936
Score = 137 bits (344), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 153/608 (25%), Positives = 244/608 (40%), Gaps = 153/608 (25%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LW +KY +F +L D+ TNR VL WLK+WD VF E +S A RR T Q
Sbjct: 188 LWTEKYRARNFMDLCGDDATNRFVLRWLKKWDPVVFPGESKSQP-----AARRPGTKQQE 242
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
+++ P +K+L+L
Sbjct: 243 EEEK-----------------------------------------------PHRKILMLT 255
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS------- 370
GPPGLGKTTLAHV A+ GY V+E+NASDDRS ++N+I + SV S
Sbjct: 256 GPPGLGKTTLAHVCARQAGYEVMEINASDDRSRDVVKNRIRTSLGTESVKTVSNRTDGNG 315
Query: 371 -----RPKCLVIDEIDGALGDGKGA-----VEVILKMVSAERKSNTAKENVAKEDQPEKI 420
+P C+++DE+DG + G+ V+ ++ +V ++K+ + A +
Sbjct: 316 PQKLAKPACVIVDEVDGVVSGSGGSGEGGFVKALIDLVLLDQKNESGN---ASSNNYGNK 372
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQ--IAKVHVFIQPSVSRVVSRLKHICNNE 478
KKKG LLRP+I ICND+YAPALR LRQ +A++ +P++ VV+RLK + E
Sbjct: 373 KKKKG-DDFRLLRPLILICNDVYAPALRPLRQSNLAEIIHVGKPTMESVVARLKSVFEKE 431
Query: 479 SMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKE--ILNVMDIGSQVVGR--------- 527
+ A L E + S ++ + + E + VM +G V GR
Sbjct: 432 GIPCDKDASRKLCEVA-WGMTSGIDAKRGAESTVEGDLRGVMVVGEWVAGRFRASALNGT 490
Query: 528 -------------KDMSRSAF-----------DIWKEIFQK-----RKTKRLRNSVSSSS 558
+D++ A DI +FQ+ ++ S +
Sbjct: 491 ARLTRQWLESNVLQDLTSGAGGARGLGRGGVKDIVSRLFQEGGGFPKQAMDFSQSKTQHE 550
Query: 559 NVSNEFDF-----------LHSLISNRGDYDVIFDGIHENILQLQYHDPVML-KTVKCLD 606
E F L +I G+ I + Y+D + L K + +
Sbjct: 551 QPQAELGFGEFQKKHAMERLRQMIDTSGEISHIMTEVFAEYPNRDYNDDLYLTKPCQAYE 610
Query: 607 CLGNSDLMHQYIMRTQQMPL--YVYQPPLAITVHRLVSQIQK------------------ 646
L D + +Q+ L Y+ QP LA H L + ++
Sbjct: 611 WLHFHDTCQSRLYASQEWELAQYLSQPVLA--CHHLFASPKRYIPSTGYDRRWGGDAEDE 668
Query: 647 -PNLEW--PKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSP 703
P L + P++ + A + ++ +++PP + R + V P L +
Sbjct: 669 GPPLPFSGPRADYQAHEAERQNRAQLQAMQAQLPPTLMRSFRSAEEVSAEFLPYLARIVS 728
Query: 704 PTLRPVAL 711
P ++PV +
Sbjct: 729 PDVKPVVV 736
>gi|154281879|ref|XP_001541752.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150411931|gb|EDN07319.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 982
Score = 136 bits (343), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 173/706 (24%), Positives = 279/706 (39%), Gaps = 173/706 (24%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
+W +KY F +L+ DE+T+R VL WLK WDS VF L+ L+ S +S N
Sbjct: 240 MWTEKYRARKFKDLIGDERTHRSVLRWLKGWDSIVFPG---------LTKLK--SKVSTN 288
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKT-RSTGPPEQKVLLL 316
++ H+K TGPP
Sbjct: 289 D------------------------------------FEERAHRKVLLLTGPP------- 305
Query: 317 CGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-------- 368
GLGKTTLAHV AK GY V+E+NASD+RS ++ +I D V +V
Sbjct: 306 ----GLGKTTLAHVCAKQAGYEVLEINASDERSRDVVKGRIRDAVGTENVKGVTMDAGGK 361
Query: 369 ----DSRPKCLVIDEIDGALGDGKGA-----VEVILKMVSA-ERKSNTAKENVAKEDQPE 418
+P C+V+DE+DG + G ++ ++ +V +R S+ A E+++ ++
Sbjct: 362 RIRKPGKPVCIVVDEVDGVVSGSGGGGEGGFMKALIDLVMLDQRNSSNASESISTRNK-- 419
Query: 419 KISKKKGCKKASLLRPVICICNDLYAPALRSLR--QIAKVHVFIQPSVSRVVSRLKHICN 476
+KG +K LLRP+I ICND+Y P+LR LR IA++ Q S+ +VV R+K +
Sbjct: 420 --GSRKG-EKFRLLRPLILICNDVYHPSLRPLRASSIAEIIHVRQASLDKVVLRMKTVFE 476
Query: 477 NESMK----------TSSIALTTLAEYT------ECDIRSCLN----------------- 503
E + +S LT+ E T E DIR L
Sbjct: 477 REGIPYDGDGVRRLCEASWGLTSTRERTNSRGIGEGDIRGVLVAGEWIAHTLRAASLTAD 536
Query: 504 ---TLQFLDK------KKEILNVMDIG----SQVVGRKDMSRSAFDIWKEIFQKRKTKRL 550
T Q+++K ++ L+ +G +V R + + F Q + L
Sbjct: 537 IRLTRQWVEKHILSGAARDGLSARGLGRGGTKDIVERVFLDGAGFPTAPTSAQTSQDPLL 596
Query: 551 RNSVSSSSNVSN-----EFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVML-KTVKC 604
+ VS+ + L ++ G+YD Y D L K
Sbjct: 597 GGDTKLPTGVSDLRKRHAINSLREMVDAAGEYDRCITECFTTYPTKTYQDDTFLSKPNAA 656
Query: 605 LDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRN---- 660
+ L D++ + Q L Y H L S + + K++ +
Sbjct: 657 YEWLYFHDMVSSKVYTNQDWELNPYLSQSVAAFHHLFSSSNRQTWDGDKAHTNNEDDEND 716
Query: 661 -------AFMEKMDIFKSWHSKI--------PPYISRHLSTESLVEDSISPLLHILSPPT 705
A + K H+ I PP + STES++ D I L +L+ P
Sbjct: 717 HPFSGPKADFAAFEAQKQNHAIITEFQSTFSPPLLRTFRSTESIIIDLIPYLTRMLA-PE 775
Query: 706 LRPVAL-------HLLSAKEKNDLAQLVSA---MVSYSLTYKNTKSDPLLNNLGNEVSHD 755
++PV + + S ++ + A + SA M + ++NT+ + H+
Sbjct: 776 IKPVVVGGSGIQRGVASVRKDTERALVKSAVRVMSGIGVKFENTRVE------SETGVHN 829
Query: 756 VSTLSFDPPINEFITFKGYR-SNHYVLALAVKQVLVHEVEKQRIMQ 800
+PP++ TF + S + A++QVL E EK+ + Q
Sbjct: 830 GWVYRMEPPLDTLTTFSKLKGSGSTPVRYAIRQVLQQEYEKEILRQ 875
>gi|296084656|emb|CBI25793.3| unnamed protein product [Vitis vinifera]
Length = 122
Score = 136 bits (343), Expect = 5e-29, Method: Composition-based stats.
Identities = 67/75 (89%), Positives = 69/75 (92%)
Query: 324 KTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGA 383
KTTLAHVAAKHCGY VVE+NASD R SSTIE KILDVVQMNSVMADS+P CLVIDEID A
Sbjct: 41 KTTLAHVAAKHCGYRVVEINASDARLSSTIEAKILDVVQMNSVMADSKPNCLVIDEIDEA 100
Query: 384 LGDGKGAVEVILKMV 398
LGDGKGAVEVILKMV
Sbjct: 101 LGDGKGAVEVILKMV 115
>gi|336269319|ref|XP_003349420.1| hypothetical protein SMAC_03007 [Sordaria macrospora k-hell]
Length = 1004
Score = 136 bits (343), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 167/712 (23%), Positives = 280/712 (39%), Gaps = 162/712 (22%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LW +KY +F +L+ D+ TNR+VL WLK+WD VF +S RRH QN
Sbjct: 246 LWTEKYRARTFMDLVGDDLTNRQVLRWLKKWDPIVFPHVAKSKPS------RRHGVQGQN 299
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
++ ++ P +K+L+L
Sbjct: 300 QQPDEEK--------------------------------------------PHRKILMLT 315
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV--MADSRPKCL 375
GPPGLGKTTLAHV A+ GY V+E+NASDDRS ++ +I + SV + + +P+
Sbjct: 316 GPPGLGKTTLAHVCARQAGYEVMEINASDDRSKDVVKGRIRTSLGTESVKTVENKKPEAG 375
Query: 376 VIDEI----------------DGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEK 419
+I G V+ ++ +V ++K+++ +
Sbjct: 376 KQQKIARPVCVVVDEVDGVVSGSGGSGEGGFVKALIDLVLLDQKNSSGPGTSTAASR--- 432
Query: 420 ISKKKGCKKASLLRPVICICNDLYAPALRSLRQ--IAKVHVFIQPSVSRVVSRLKHICNN 477
KKK +RP+I ICND+Y P+LR LRQ +A++ +PSV VV+RLK +
Sbjct: 433 --KKKKGDDFRQMRPLILICNDVYHPSLRPLRQSGLAEIIHVGKPSVEAVVTRLKTVFEK 490
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKE--ILNVMDIGSQVVGRKDMSRSAF 535
E + A L E + S ++ + + E + +M +G V GR + ++
Sbjct: 491 EGIPCEKDAARKLCE-AAWGMTSGIDAKRGAEGNAEGDLRGIMVVGEWVAGRLRATITST 549
Query: 536 DI----W------------------------KEIFQKRKTKRLR----NSVSSSSNVSNE 563
+ W KEI ++ K + N S
Sbjct: 550 PVLTRQWIDQNIVHDLAHGGGGARGLGRGGVKEIAEQPKYAKHEQPQANLGFSEQRKKYA 609
Query: 564 FDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVML-KTVKCLDCLGNSDLMHQYIMRTQ 622
L +I G+ D I I +++D L K + + D + +Q
Sbjct: 610 MARLREMIDTSGEVDRIMTEIFSEYPNREFNDDSFLTKPDAAYEWMYFHDTCSTRLYSSQ 669
Query: 623 QMPL--YVYQPPLAITVHRLVSQIQK-------------------PNLEWPKSYQRYRNA 661
+ L Y+ QPPLA H L + ++ P L + +
Sbjct: 670 EWELGQYISQPPLA--CHHLFASPKRHQPLNTERRWGDAMEEDTAPPLPFSGPRANFEAH 727
Query: 662 FMEKMD--IFKSWHSKIPPYISRHL-STESLVEDSISPLLHILSPPTLRPVALH------ 712
EK++ + ++PP + R S E + +S L+ ++S P ++PV +
Sbjct: 728 EAEKVNRAALQGLQGQLPPSLHRLFRSPEDISTHFLSYLVRLIS-PDVKPVVVGGSDKSG 786
Query: 713 -LLSAKEKNDLAQL-----VSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPIN 766
+ S + + + A + V A V +L + DP LG + +P ++
Sbjct: 787 AVASVRREGEKAMVRRAAQVLAEVGIALQKGKIEQDP---TLGQQFRTQW-VYRMEPDLD 842
Query: 767 EFITFKGYRSNHYVLA------LAVKQVLVHEVEKQRIMQVTIGKSEHLADG 812
TF+ + VLA AV+QVL E++K M+ + + +G
Sbjct: 843 TLATFE--TAGALVLASQAPTRYAVRQVLDQELQKTIAMRENAARQARMNNG 892
>gi|312078235|ref|XP_003141650.1| hypothetical protein LOAG_06066 [Loa loa]
Length = 742
Score = 136 bits (342), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 165/663 (24%), Positives = 271/663 (40%), Gaps = 163/663 (24%)
Query: 174 KALNSSSEGQSDRSLPE-----KPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQW 228
K LNS + + +PE + + LWV+KYAP+++ +L+SDE NR +L WL+ W
Sbjct: 174 KVLNSGIDFEVPDIVPEGVEGESVFIQDDLWVEKYAPHTYADLISDETVNRLLLNWLRLW 233
Query: 229 DSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYE 288
D CVF R+ + VL +
Sbjct: 234 DECVFH---RAIPDFVLRS----------------------------------------- 249
Query: 289 NSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDR 348
SN + + S K R P KV+LL GP G GKTTLA + A+H GY VV +NASD+R
Sbjct: 250 TSNQQQLILSSEKPRR----PSHKVVLLAGPAGTGKTTLATLVAQHTGYRVVSLNASDER 305
Query: 349 SSSTIENKILDVVQMNSVM-ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTA 407
++ E D ++ + ADS+P CL++DEIDGA ++ + K V+A
Sbjct: 306 NTVDFEKCFEDALRTTRTLDADSKPNCLILDEIDGA---PTQSIHYLCKAVTA------- 355
Query: 408 KENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRV 467
+ SL RP
Sbjct: 356 ------------------AGRHSLRRP--------------------------------- 364
Query: 468 VSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDK-------KKEILNVMDI 520
+S+L+H +K AL+ + + D+RS +N LQF+ +K +L +
Sbjct: 365 ISKLEH------LKVEPSALSEIIDVCSRDLRSAINNLQFIASQNCATIDRKAVLKFCER 418
Query: 521 GSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVI 580
Q G K S FD W +F+ + + ++ + + L N + D
Sbjct: 419 EKQ-FGDKS---SLFDSWASVFEISRHLDANGRIQDIASRIKQITLISELHGN--ETDRF 472
Query: 581 FDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRL 640
+ G+ N L + V++ + L D + + Q L Y + +++H L
Sbjct: 473 YMGLFTNYLNCK-SAAVLMNASMAIRQLCYYDRIVTSMNSVQDYNLLKYLSAVCVSIHML 531
Query: 641 VSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHI 700
+ + +L +P Y + + ++I +S + + LST +L I P L
Sbjct: 532 LCCRGRTHLSFPTEYHSAIQRYEQSVEIVESVRAGATQK-NFSLSTFAL---EILPYLIC 587
Query: 701 LSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVS-TL 759
+ P L+P+ L S +E + L +VS M SYSLT+ + VS D S +
Sbjct: 588 IVQPDLKPMNTQLYSVRELDLLHSVVSIMRSYSLTFTS-------------VSQDGSVSF 634
Query: 760 SFDPPINEFITFKGYRSNH-----YVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYK 814
F P I++ + F + H L+ A +Q++ HE+E +++ V + LA+G
Sbjct: 635 VFKPAIDQLVMFTEDGACHNNRSSNTLSNAARQLIAHEIELEKLRNV-----DALANGTV 689
Query: 815 ENM 817
N+
Sbjct: 690 GNL 692
>gi|156088877|ref|XP_001611845.1| hypothetical protein [Babesia bovis T2Bo]
gi|154799099|gb|EDO08277.1| hypothetical protein BBOV_III007160 [Babesia bovis]
Length = 747
Score = 136 bits (342), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 167/363 (46%), Gaps = 92/363 (25%)
Query: 199 WVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNK 258
W+ KY P F++LL+DE N EVL WL+ W + S +
Sbjct: 184 WLIKYQPRYFSDLLTDEAVNVEVLEWLRSW---------------------KCSKLYSGN 222
Query: 259 KQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCG 318
K++ S++ +K+ K++ P K+LLL G
Sbjct: 223 KKSQSAYQQKD-------------------------------KESDEVDVP--KILLLGG 249
Query: 319 PPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVID 378
P G+GK+T+ +V A+HCG+ VVE+NAS+DRS + I +V NS+ + +RP +++
Sbjct: 250 PAGVGKSTVVNVLARHCGFDVVEINASEDRSKEKVLPTIKGIVTANSI-SKNRPNLCLLE 308
Query: 379 EIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICI 438
E+DG L +G V LK + ++N+ K RP++CI
Sbjct: 309 EVDG-LHAAEGRVIGALK--------DLNQKNMIK-------------------RPIVCI 340
Query: 439 CNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDI 498
CN+LY LR LRQI+KV V + RL +I E + L L + DI
Sbjct: 341 CNELYDKNLRELRQISKVIVVESCYTEALKHRLANIAELEGYQVDEQLLDDLIKLHHNDI 400
Query: 499 RSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKT----KRLRNSV 554
RSC+ L+F+ K + + ++I + KD S+ +++F +R T +R+ ++
Sbjct: 401 RSCITALEFIIKNPHLADNLEIFA-----KDRSQDIITFLRDLFNQRSTPQAMRRIADAF 455
Query: 555 SSS 557
++S
Sbjct: 456 AAS 458
>gi|67541048|ref|XP_664298.1| hypothetical protein AN6694.2 [Aspergillus nidulans FGSC A4]
gi|40739322|gb|EAA58512.1| hypothetical protein AN6694.2 [Aspergillus nidulans FGSC A4]
Length = 1301
Score = 135 bits (341), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 176/748 (23%), Positives = 280/748 (37%), Gaps = 188/748 (25%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
+W +KY +TEL+ DE+TNR +L WL+ WD V+ S R+ QN
Sbjct: 257 MWTEKYRARKYTELIGDERTNRSILRWLRGWDPIVYPSLARA---------------KQN 301
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
KK N+ R P +KVLLLC
Sbjct: 302 KKYNNDEEER-----------------------------------------PHRKVLLLC 320
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILD------VVQMNSVMADSR 371
GPPGLGKTTLAHV A+ GY V+E+NASD+RS ++ +I D V MN + + +
Sbjct: 321 GPPGLGKTTLAHVCARQAGYEVLEINASDERSRDVVKGRIRDALGTENVKGMNVELGEQK 380
Query: 372 PKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNT-----AKENVAKEDQPEKISKKKGC 426
+ + K+ T + N A+ + +K+
Sbjct: 381 VRKVGRPVCVVVDEVDGVVSGSGGSGEGGFMKALTDLVLLDQRNSARTSERASDGRKRKG 440
Query: 427 KKASLLRPVICICNDLYAPALRSLRQ--IAKVHVFIQPSVSRVVSRLKHICNNESMKTSS 484
LRP+I +CND+Y +LR LRQ +A++ Q + VVSR+K I E + + S
Sbjct: 441 DNFRFLRPLILVCNDVYHASLRPLRQSSVAEIIHVRQAPLENVVSRMKSIFTLEGIPSDS 500
Query: 485 IALTTLAEYT-----------------ECDIRSCLNTLQFLDKK---------------- 511
+ L E + E DIRS L +++ K
Sbjct: 501 DGVRRLCEASWGLAKRKQRGVRSTGAAEGDIRSVLVAAEWVAHKLRNESSAPLRLTRNWL 560
Query: 512 -KEILNVMDIGSQVVGRKDMSRSAF-DIWKEIFQKRKT--------KRLRNSVSSSSNVS 561
+ +L GS G M+R DI +F + + L++ S VS
Sbjct: 561 EQRVLADAGGGSFFKG---MNRGGVRDIVDRVFTEGAGFPDVPLGDESLQDPYDRSEAVS 617
Query: 562 ---------NEFDFLHSLISNRGDYD-VIFDGIHENILQLQYHDPVMLKTVKCLDCLGNS 611
+ L ++ GD+D + LQ D + K D L
Sbjct: 618 VDVANIKKRHAIRRLCEMVDASGDHDRCTSECFSSYPLQPYQDDTFLTKPNAAYDWLHFH 677
Query: 612 DLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYR------------ 659
D + I L Y H L + Q K+ Q+YR
Sbjct: 678 DTISSRIYSAHDWELGAYLSQATSAFHLLFATAQG------KAQQQYREIDEEEEEAHPF 731
Query: 660 ----------NAFMEKMDIFKSWHSKI-PPYISRHLSTESLVEDSISPLLHILSPPTLRP 708
A + I ++ S P + S+ ++ + I ++ +LS P ++P
Sbjct: 732 SGPRADYAAFEATKQNQAILSTFQSSFSAPLLRLFRSSNNVATELIPNVIRMLS-PDIKP 790
Query: 709 VALH------LLSAKEKNDLAQLVSA---MVSYSLTYKNTKSDPLLNNLGNEVSHDVSTL 759
V + + S +++++ A + SA M +T++ + + N G H
Sbjct: 791 VVVRGSEQKSVASVRKESERALVQSAVRVMTGLGVTFEKVR----IENEGG--GHGGWAY 844
Query: 760 SFDPPINEFITFK---GYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKEN 816
+PP++ ++F G+ S + AV+QVL E K+ I + + EN
Sbjct: 845 RMEPPLDALVSFSKVPGFSSATNPVRYAVRQVLDQEYRKESIRKNS------------EN 892
Query: 817 MDLAGEEDSKTES---AKTNNAAVSAKL 841
+ G + S T+S N A +AKL
Sbjct: 893 LSSTGSKKSTTKSDDIETPANPAEAAKL 920
>gi|124505855|ref|XP_001351041.1| replication factor c protein, putative [Plasmodium falciparum 3D7]
gi|23510684|emb|CAD49069.1| replication factor c protein, putative [Plasmodium falciparum 3D7]
Length = 1167
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 122/463 (26%), Positives = 205/463 (44%), Gaps = 87/463 (18%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS 370
++VLLL G G GKTTLA+V A H ++++E+N SDDR+ T+ I VV +NSV S
Sbjct: 385 ERVLLLGGSSGKGKTTLAYVIANHFKFNIIEINGSDDRNKETLIPFIESVVCINSVT--S 442
Query: 371 RPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKAS 430
+P +IDEIDG L ++ I+K ++ + K N K+
Sbjct: 443 KPNLCIIDEIDG-LSSTHQNIDSIMKFLNKKDKKN----------------------KSI 479
Query: 431 LLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTL 490
+ RP+ICICND+Y +L+ LR+I+KV + ++ + R+ +IC+ E++K ++ A+ L
Sbjct: 480 IKRPIICICNDIYHKSLKELRKISKVVIVENINIEMLKIRINYICDKENIKINNEAINKL 539
Query: 491 AEYTECDIRSCLNTLQFLD--KKKEILNVMDI--------------GSQVVGRKDMS--- 531
+ + DIRS LNT+ FL + I +V + G +VG +++S
Sbjct: 540 IDICKSDIRSILNTIYFLSIGSRNTITHVQNNNNTTSTFGVSKENEGKHIVGYQNISSTQ 599
Query: 532 -----RSAFDIWKEIFQKRKT----KRLRNSVSSSSNVSNEF------------------ 564
S +I+ E + +K L NS + +N +
Sbjct: 600 NNAYTTSINNIYDESSKNKKVVIINMELLNSYLFYKDANNNYIELLNMIYVKNKNKKITK 659
Query: 565 -------DFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMH-- 615
DF + ++N +Y + I++N+L + ++D K CLD L D M
Sbjct: 660 KLLQDCHDFFYINLANEYNYAQSYYYIYDNLLSIPFNDFDFCKLSYCLDFLCFCDNMEYE 719
Query: 616 --QYIMRTQQMPLYVYQPPLAITVH-RLVSQIQK--PNLEWPKSYQRYRNAFMEKMDIFK 670
+ + Q LY IT+H S IQ N +QR +N + D F
Sbjct: 720 QKNILNYSLQKTLYYVVYLFIITIHLNTNSHIQYILINNSHSNYFQRKKNQVQKIKDNFV 779
Query: 671 SWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHL 713
+ + Y +++ ++ + I+ L +HL
Sbjct: 780 NEQFGVITY--KYIYSKHFFSEIINYLFSFFYMNEFFFKNVHL 820
>gi|325093265|gb|EGC46575.1| chromosome transmission fidelity protein [Ajellomyces capsulatus
H88]
Length = 948
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 174/723 (24%), Positives = 286/723 (39%), Gaps = 173/723 (23%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
+W +KY F +L+ DE+T+R VL WLK WDS VF L+ L+ S +S N
Sbjct: 206 MWTEKYRARKFKDLIGDERTHRSVLRWLKGWDSIVFPG---------LTKLK--SKVSTN 254
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKT-RSTGPPEQKVLLL 316
++ H+K TGPP
Sbjct: 255 D------------------------------------FEERAHRKVLLLTGPP------- 271
Query: 317 CGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-------- 368
GLGKTTLAHV AK GY V+E+NASD+RS ++ +I D V +V
Sbjct: 272 ----GLGKTTLAHVCAKQAGYEVLEINASDERSRDVVKGRIRDAVGTENVKGVTMDAGGK 327
Query: 369 ----DSRPKCLVIDEIDGALGDGKGA-----VEVILKMVSA-ERKSNTAKENVAKEDQPE 418
+P C+V+DE+DG + G ++ ++ +V +R S+ A E+++ ++
Sbjct: 328 RIRKPGKPVCIVVDEVDGVVSGSGGGGEGGFMKALIDLVMLDQRNSSNASESISTSNK-- 385
Query: 419 KISKKKGCKKASLLRPVICICNDLYAPALRSLR--QIAKVHVFIQPSVSRVVSRLKHI-- 474
+KG +K LLRP+I ICND+Y P+LR LR IA++ Q S+ +VV R+K +
Sbjct: 386 --GSRKG-EKFRLLRPLILICNDVYHPSLRPLRASSIAEIIHVRQASLDKVVLRMKTVFE 442
Query: 475 -----CNNESMK---TSSIALTTLAEYT------ECDIRSCLN----------------- 503
C+ + ++ +S LT+ E T E DIR L
Sbjct: 443 REGIPCDGDGVRRLCEASWGLTSTRERTNSRGIGEGDIRGVLVAGEWIAHTLRAASLTAD 502
Query: 504 ---TLQFLDK------KKEILNVMDIG----SQVVGRKDMSRSAFDIWKEIFQKRKTKRL 550
T Q+++K ++ L+ +G +V R + + F Q + L
Sbjct: 503 IRLTRQWVEKHILSGAARDGLSARGLGRGGTKDIVERVFLDGAGFPTAPTSAQTFQDPLL 562
Query: 551 RNSVSSSSNVSN-----EFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVML-KTVKC 604
+ VS+ + L ++ G+YD Y D L K
Sbjct: 563 GGDTKPPTGVSDLRKRHAINSLREMVDAAGEYDRCITECFTTYPTKTYQDDTFLSKPNAA 622
Query: 605 LDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRN---- 660
+ L D++ + Q L Y H L S + + K++ +
Sbjct: 623 YEWLYFHDMVSSKVYTNQDWELNPYLSQSVAAFHHLFSSSNRQTWDNDKAHTNNEDDEDD 682
Query: 661 -------AFMEKMDIFKSWHSKI--------PPYISRHLSTESLVEDSISPLLHILSPPT 705
A + K H+ I PP + STES++ D I L +L+ P
Sbjct: 683 HPFSGPKADFAAFEAQKQNHAIITEFQSTFSPPLLRTFRSTESIIIDLIPYLTRMLA-PE 741
Query: 706 LRPVAL-------HLLSAKEKNDLAQLVSA---MVSYSLTYKNTKSDPLLNNLGNEVSHD 755
++PV + + S ++ + A + SA M + ++NT+ + H+
Sbjct: 742 IKPVVVGGSGIQRGVASVRKDTERALVKSAVRVMSGIGVKFENTRVE------SETGVHN 795
Query: 756 VSTLSFDPPINEFITFKGYR-SNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYK 814
+PP++ F + S + A++QVL E EK+ + Q + L +
Sbjct: 796 GWVYRMEPPLDTLTMFSKLKGSGSTPVRYAIRQVLQQEYEKEILRQRSQAGQARLNGPQR 855
Query: 815 ENM 817
+N
Sbjct: 856 DNF 858
>gi|399218566|emb|CCF75453.1| unnamed protein product [Babesia microti strain RI]
Length = 1217
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 127/432 (29%), Positives = 201/432 (46%), Gaps = 78/432 (18%)
Query: 297 DSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENK 356
+SW G P ++L+L GPPG+GK+TL HV A+H Y+VVE+NASDDR+ +
Sbjct: 601 NSWKNLEERGGEP--RILILGGPPGVGKSTLVHVIARHSNYNVVEINASDDRTKDRLMPM 658
Query: 357 ILDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQ 416
IL + NS +P +++EIDG G +VI +VS
Sbjct: 659 ILSITTTNS--TTGQPNLCLLEEIDGL---ASGEEQVISALVSL---------------- 697
Query: 417 PEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICN 476
EK +K+ G K RP+IC CNDLY L LRQIAK+ P ++ RL+ I +
Sbjct: 698 LEKRTKEGGYKVK---RPIICTCNDLYNRNLIKLRQIAKILFVYPPDELTLLQRLQSILS 754
Query: 477 NESMKTSSIALTTLAEYTECDIRSCLNTLQFL------DKKKEI-LN-VMDIGSQVVGRK 528
+ES+ + L+ L DIRSC+ L + DKK +I LN ++D R
Sbjct: 755 SESIVMDPLMLSNLINVYREDIRSCILALDYYTRDYRKDKKFKIHLNDMLDAFKDHSSRI 814
Query: 529 D-MSRSAFDIWKE-----IFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFD 582
D R F + KE I + K L ++ V+ F+ + +L+
Sbjct: 815 DEFIRLVFSLSKEDESINIINNKLIKIL-----TTGQVNPNFNTMAALLD---------- 859
Query: 583 GIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRL-- 640
+++L++ Y+DP M+ T +D L SD+++ I L + P TV+++
Sbjct: 860 ---DHLLKIPYNDPNMINTSYIMDLLAQSDVINSKININPSCSLLI--VPYLETVNKIRP 914
Query: 641 -----VSQIQKPNLEWPK-SYQRY---RNAFMEKMDIFKSWHSKIPPYISRHLSTESLVE 691
++ I P L +QR RNA K+ + P+ + H+ S +
Sbjct: 915 FQSSRLTSIVYPALSIHNIGFQRRLASRNA-------IKNLQANAIPHFANHIVNPSFLT 967
Query: 692 DSISPLLHILSP 703
D++S +L+++ P
Sbjct: 968 DTLSFILYMIRP 979
Score = 53.9 bits (128), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 143 VKKLDVRAHSNSLTSEPIDVLLQKVEQEAFNKALNSSSEGQSDRSLPEKPVVHE----QL 198
++ + A N+ S + LL K + F + + S + + VV E QL
Sbjct: 514 LRSYSIAAEDNNSNSNYLTQLLDKPIEYLFKQLIESDELIFETKKRKVEEVVTECAQDQL 573
Query: 199 WVDKYAPNSFTELLSDEQTNREVLLWLKQW 228
WVDKY P F++LLSDE+ NRE L WL W
Sbjct: 574 WVDKYKPLYFSDLLSDEKVNREALCWLNSW 603
>gi|313216951|emb|CBY38155.1| unnamed protein product [Oikopleura dioica]
Length = 387
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 99/185 (53%), Gaps = 31/185 (16%)
Query: 199 WVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNK 258
W Y +TELLSDE NR ++ W+K+WD CVF + R ++ K
Sbjct: 209 WTSTYRAKKYTELLSDEYINRTIIKWMKKWDPCVFNKKSE-----------RSKKKAEEK 257
Query: 259 KQNDSSFTRKNRGNR-WSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
KQ +KNR + WS NL E + G P+ KVL+LC
Sbjct: 258 KQMTEEEKKKNRFKKAWSE-------NLAEEVDEEDPL-----------GRPKMKVLMLC 299
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVI 377
G PGLGKTTLA VAAKHCGY+ VE+NASDDR+ + + K+ D + NS + +P CL++
Sbjct: 300 GAPGLGKTTLAFVAAKHCGYNSVEINASDDRAGTEFKRKVDDAL-TNSSATNKKPSCLIL 358
Query: 378 DEIDG 382
DEIDG
Sbjct: 359 DEIDG 363
>gi|97046721|sp|P0C1D3.1|CTF18_EMENI RecName: Full=Chromosome transmission fidelity protein 18
gi|259480278|tpe|CBF71262.1| TPA: Chromosome transmission fidelity protein 18
[Source:UniProtKB/Swiss-Prot;Acc:P0C1D3] [Aspergillus
nidulans FGSC A4]
Length = 993
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 176/748 (23%), Positives = 280/748 (37%), Gaps = 188/748 (25%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
+W +KY +TEL+ DE+TNR +L WL+ WD V+ S R+ QN
Sbjct: 257 MWTEKYRARKYTELIGDERTNRSILRWLRGWDPIVYPSLARA---------------KQN 301
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
KK N+ R P +KVLLLC
Sbjct: 302 KKYNNDEEER-----------------------------------------PHRKVLLLC 320
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILD------VVQMNSVMADSR 371
GPPGLGKTTLAHV A+ GY V+E+NASD+RS ++ +I D V MN + + +
Sbjct: 321 GPPGLGKTTLAHVCARQAGYEVLEINASDERSRDVVKGRIRDALGTENVKGMNVELGEQK 380
Query: 372 PKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNT-----AKENVAKEDQPEKISKKKGC 426
+ + K+ T + N A+ + +K+
Sbjct: 381 VRKVGRPVCVVVDEVDGVVSGSGGSGEGGFMKALTDLVLLDQRNSARTSERASDGRKRKG 440
Query: 427 KKASLLRPVICICNDLYAPALRSLRQ--IAKVHVFIQPSVSRVVSRLKHICNNESMKTSS 484
LRP+I +CND+Y +LR LRQ +A++ Q + VVSR+K I E + + S
Sbjct: 441 DNFRFLRPLILVCNDVYHASLRPLRQSSVAEIIHVRQAPLENVVSRMKSIFTLEGIPSDS 500
Query: 485 IALTTLAEYT-----------------ECDIRSCLNTLQFLDKK---------------- 511
+ L E + E DIRS L +++ K
Sbjct: 501 DGVRRLCEASWGLAKRKQRGVRSTGAAEGDIRSVLVAAEWVAHKLRNESSAPLRLTRNWL 560
Query: 512 -KEILNVMDIGSQVVGRKDMSRSAF-DIWKEIFQKRKT--------KRLRNSVSSSSNVS 561
+ +L GS G M+R DI +F + + L++ S VS
Sbjct: 561 EQRVLADAGGGSFFKG---MNRGGVRDIVDRVFTEGAGFPDVPLGDESLQDPYDRSEAVS 617
Query: 562 ---------NEFDFLHSLISNRGDYD-VIFDGIHENILQLQYHDPVMLKTVKCLDCLGNS 611
+ L ++ GD+D + LQ D + K D L
Sbjct: 618 VDVANIKKRHAIRRLCEMVDASGDHDRCTSECFSSYPLQPYQDDTFLTKPNAAYDWLHFH 677
Query: 612 DLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYR------------ 659
D + I L Y H L + Q K+ Q+YR
Sbjct: 678 DTISSRIYSAHDWELGAYLSQATSAFHLLFATAQG------KAQQQYREIDEEEEEAHPF 731
Query: 660 ----------NAFMEKMDIFKSWHSKI-PPYISRHLSTESLVEDSISPLLHILSPPTLRP 708
A + I ++ S P + S+ ++ + I ++ +LS P ++P
Sbjct: 732 SGPRADYAAFEATKQNQAILSTFQSSFSAPLLRLFRSSNNVATELIPNVIRMLS-PDIKP 790
Query: 709 VALH------LLSAKEKNDLAQLVSA---MVSYSLTYKNTKSDPLLNNLGNEVSHDVSTL 759
V + + S +++++ A + SA M +T++ + + N G H
Sbjct: 791 VVVRGSEQKSVASVRKESERALVQSAVRVMTGLGVTFEKVR----IENEGG--GHGGWAY 844
Query: 760 SFDPPINEFITFK---GYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKEN 816
+PP++ ++F G+ S + AV+QVL E K+ I + + EN
Sbjct: 845 RMEPPLDALVSFSKVPGFSSATNPVRYAVRQVLDQEYRKESIRKNS------------EN 892
Query: 817 MDLAGEEDSKTESAKTN---NAAVSAKL 841
+ G + S T+S N A +AKL
Sbjct: 893 LSSTGSKKSTTKSDDIETPANPAEAAKL 920
>gi|342886217|gb|EGU86114.1| hypothetical protein FOXB_03383 [Fusarium oxysporum Fo5176]
Length = 962
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 167/354 (47%), Gaps = 83/354 (23%)
Query: 197 QLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQ 256
+LW +KY +F +L ++ TNR VL WLK+WD VF + S+ V++ RR Q
Sbjct: 212 RLWTEKYRARNFMDLCGNDNTNRRVLGWLKKWDPVVFPGAAK--SKPVIA--RRPGAQQQ 267
Query: 257 NKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLL 316
+++ P +K+LLL
Sbjct: 268 EEEEK-----------------------------------------------PHRKILLL 280
Query: 317 CGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS------ 370
GPPGLGKTTLAHV A+ GY V+E+NASDDRS ++N+I + SV S
Sbjct: 281 TGPPGLGKTTLAHVCARQAGYEVMEINASDDRSRDVVKNRIRTSLGTESVKTVSNRKDGD 340
Query: 371 ------RPKCLVIDEIDGALGDGKGA-----VEVILKMVSAERK--SNTAKENVAKEDQP 417
+P C+V+DE+DG + G+ V+ ++ +V ++K S EN +
Sbjct: 341 GPPKLAKPACVVVDEVDGVVSGSGGSGEGGFVKALIDLVLLDQKNASGATTENYGRR--- 397
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQ--IAKVHVFIQPSVSRVVSRLKHIC 475
KKKG LLRP+I ICND+YAPALR LR +A++ +P++ VV+RLK++
Sbjct: 398 ----KKKG-DDFRLLRPLILICNDVYAPALRPLRHSNLAEIIHVGKPTMESVVTRLKNVF 452
Query: 476 NNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKE--ILNVMDIGSQVVGR 527
E + A L E + S ++ + + E + VM +G V GR
Sbjct: 453 EKEGIPCEKDAARKLCE-AAWGMTSGIDARRGAESTVEGDLRGVMVVGEWVAGR 505
>gi|380093509|emb|CCC09168.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1022
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 156/352 (44%), Gaps = 78/352 (22%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LW +KY +F +L+ D+ TNR+VL WLK+WD VF +S RRH QN
Sbjct: 246 LWTEKYRARTFMDLVGDDLTNRQVLRWLKKWDPIVFPHVAKSKPS------RRHGVQGQN 299
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
++ ++ P +K+L+L
Sbjct: 300 QQPDEEK--------------------------------------------PHRKILMLT 315
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV--MADSRPKCL 375
GPPGLGKTTLAHV A+ GY V+E+NASDDRS ++ +I + SV + + +P+
Sbjct: 316 GPPGLGKTTLAHVCARQAGYEVMEINASDDRSKDVVKGRIRTSLGTESVKTVENKKPEAG 375
Query: 376 VIDEI----------------DGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEK 419
+I G V+ ++ +V ++K+++ +
Sbjct: 376 KQQKIARPVCVVVDEVDGVVSGSGGSGEGGFVKALIDLVLLDQKNSSGPGTSTAASR--- 432
Query: 420 ISKKKGCKKASLLRPVICICNDLYAPALRSLRQ--IAKVHVFIQPSVSRVVSRLKHICNN 477
KKK +RP+I ICND+Y P+LR LRQ +A++ +PSV VV+RLK +
Sbjct: 433 --KKKKGDDFRQMRPLILICNDVYHPSLRPLRQSGLAEIIHVGKPSVEAVVTRLKTVFEK 490
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKE--ILNVMDIGSQVVGR 527
E + A L E + S ++ + + E + +M +G V GR
Sbjct: 491 EGIPCEKDAARKLCE-AAWGMTSGIDAKRGAEGNAEGDLRGIMVVGEWVAGR 541
>gi|225563313|gb|EEH11592.1| chromosome transmission fidelity protein [Ajellomyces capsulatus
G186AR]
Length = 948
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 174/723 (24%), Positives = 284/723 (39%), Gaps = 173/723 (23%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
+W +KY F +L+ DE+T+R VL WLK WDS VF L+ L+ S +S N
Sbjct: 206 MWTEKYRARKFKDLIGDERTHRSVLRWLKGWDSIVFPG---------LTKLK--SKVSTN 254
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKT-RSTGPPEQKVLLL 316
++ H+K TGPP
Sbjct: 255 D------------------------------------FEERAHRKVLLLTGPP------- 271
Query: 317 CGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-------- 368
GLGKTTLAHV AK GY V+E+NASD+RS ++ +I D V +V
Sbjct: 272 ----GLGKTTLAHVCAKQAGYEVLEINASDERSRDVVKGRIRDAVGTENVKGVTMDAGGK 327
Query: 369 ----DSRPKCLVIDEIDGALGDGKGA-----VEVILKMVSA-ERKSNTAKENVAKEDQPE 418
+P C+V+DE+DG + G ++ ++ +V +R S+ A E+++ ++
Sbjct: 328 RIRKPGKPVCIVVDEVDGVVSGSGGGGEGGFMKALIDLVMLDQRNSSNASESISTRNK-- 385
Query: 419 KISKKKGCKKASLLRPVICICNDLYAPALRSLR--QIAKVHVFIQPSVSRVVSRLKHICN 476
+KG +K LLRP+I ICND+Y P+LR LR IA++ Q S+ +VV R+K +
Sbjct: 386 --GSRKG-EKFRLLRPLILICNDVYHPSLRPLRASSIAEIIHVRQASLDKVVLRMKTVFE 442
Query: 477 NESMK----------TSSIALTTLAEYT------ECDIRSCLN----------------- 503
E + +S LT+ E T E DIR L
Sbjct: 443 KEGIPYDGDGVRRLCEASWGLTSTRERTNSRGIGEGDIRGVLVAGEWIAHTLRAASLTAD 502
Query: 504 ---TLQFLDK------KKEILNVMDIG----SQVVGRKDMSRSAFDIWKEIFQKRKTKRL 550
T Q+++K ++ L+ +G +V R + + F Q + L
Sbjct: 503 IRLTRQWVEKHILSGAARDGLSARGLGRGGTKDIVERVFLDGAGFPTAPTSAQTFQDPLL 562
Query: 551 RNSVSSSSNVSN-----EFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVML-KTVKC 604
++VS+ + L ++ G+YD Y D L K
Sbjct: 563 GGDTKLPTDVSDLRKRHAINSLREMVDAAGEYDRCITECFTTYPTKTYQDDTFLSKPNAA 622
Query: 605 LDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRN---- 660
+ L D++ + Q L Y H L S + + K++ +
Sbjct: 623 YEWLYFHDMVSSKVYTNQDWELNPYLSQSVAAFHHLFSSSNRQTWDGDKAHTNNEDDEDD 682
Query: 661 -------AFMEKMDIFKSWHSKI--------PPYISRHLSTESLVEDSISPLLHILSPPT 705
A + K H+ I PP + STES++ D I L +L+ P
Sbjct: 683 HPFSGPKADFAAFEAQKQNHAIITEFQSTFSPPLLRTFRSTESIIIDLIPYLTRMLA-PE 741
Query: 706 LRPVAL-------HLLSAKEKNDLAQLVSA---MVSYSLTYKNTKSDPLLNNLGNEVSHD 755
++PV + + S ++ + A + SA M + ++NT+ + H+
Sbjct: 742 IKPVVVGGSGIQRGVASVRKDTERALVKSAVRVMSGIGVKFENTRVE------SETGVHN 795
Query: 756 VSTLSFDPPINEFITFKGYR-SNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYK 814
+PP++ F + S + A++QVL E EK+ + Q + L +
Sbjct: 796 GWVYRMEPPLDTLTMFSKLKGSGSTPVRYAIRQVLQQEYEKEILRQRSQAGQARLNGPQR 855
Query: 815 ENM 817
+N
Sbjct: 856 DNF 858
>gi|221052234|ref|XP_002257693.1| replication factor c protein [Plasmodium knowlesi strain H]
gi|193807524|emb|CAQ38029.1| replication factor c protein, putative [Plasmodium knowlesi strain
H]
Length = 1095
Score = 134 bits (337), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 168/355 (47%), Gaps = 57/355 (16%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS 370
Q++LLL G G GKTTLA+V A H ++V+E+N SDDR+ T+ + +V NS+ S
Sbjct: 315 QRILLLGGSAGKGKTTLAYVIANHFKFNVIEINGSDDRNKETLIPLLESIVCNNSI--GS 372
Query: 371 RPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKAS 430
+P +IDEIDG + + +E ++K ++ + + N ++
Sbjct: 373 KPNMCIIDEIDG-MTSTQQNIEAVMKFLTKKDRRN----------------------RSI 409
Query: 431 LLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTL 490
+ RP+ICICND+Y +L+ LR+I+KV V + + R+ IC+ E + + ++ L
Sbjct: 410 IKRPIICICNDIYHKSLKELRKISKVVVVDSVNYETLKGRIHFICDREGISIGNDTVSKL 469
Query: 491 AEYTECDIRSCLNTLQFLD------------------------KKKEILNVMDIGSQVVG 526
E + DIR+ LNT+ FL ++++++ MD+ + +
Sbjct: 470 VEICKGDIRAILNTVCFLSIGGGSTSNGGTNGSASVIGQRTHKQRRKVVITMDLLNAYLF 529
Query: 527 RKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHE 586
KD + + ++ I+ K K K++ + + F H +SN +Y + +++
Sbjct: 530 YKDANNNYMELLNMIYVKNKNKKMIKQLLQEC-----YQFFHLNLSNEYNYLQTYYYVYD 584
Query: 587 NILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLV 641
N++ + ++D K LD L D M R +Q Y L V+ +
Sbjct: 585 NLMNIPFNDFDFCKLSYSLDFLSFCDNME---YRQKQNFNYSMHKMLFYAVYLFI 636
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 199 WVDKYAPNSFTELLSDEQTNREVLLWLKQW 228
+V+KY F+ELL+DE NREVLLW+KQW
Sbjct: 254 FVEKYRAKYFSELLTDETINREVLLWMKQW 283
>gi|449476503|ref|XP_002186835.2| PREDICTED: uncharacterized protein LOC100222769, partial
[Taeniopygia guttata]
Length = 781
Score = 134 bits (337), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/246 (36%), Positives = 115/246 (46%), Gaps = 58/246 (23%)
Query: 170 EAFNKALNSSSEGQS-DRSLPEKPVVHEQ-----LWVDKYAPNSFTELLSDEQTNREVLL 223
E N L S + +S D S+ P E+ LWVDK+ P + ELLSD+ TNR +L
Sbjct: 178 EIINSCLGSEASTESPDPSMDTAPAAQEESAPHCLWVDKFTPQRYMELLSDDYTNRCLLK 237
Query: 224 WLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSN 283
WLK WD+ VFG + + A H +S K+ N+W +
Sbjct: 238 WLKLWDTVVFGKDKAGKKPKPSPAA--HPQLSHPKEHP----------NKWKSKVQLTEE 285
Query: 284 NLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVN 343
LE E HK+ P+ KV LLCGPPGLGKTTLAHV A+H GY+ VE+N
Sbjct: 286 MLEAELDQ--------HKR------PKHKVALLCGPPGLGKTTLAHVIARHAGYNAVEMN 331
Query: 344 A-------------------------SDDRSSSTIENKILDVVQMNSVMAD-SRPKCLVI 377
A SDDRS + +I QM SV+ RP CL+I
Sbjct: 332 ARGDAVPGVVLAVSPPPRSAIPVSPRSDDRSPEVFQTRIEAATQMRSVLGSHERPNCLII 391
Query: 378 DEIDGA 383
DEIDGA
Sbjct: 392 DEIDGA 397
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/285 (33%), Positives = 135/285 (47%), Gaps = 54/285 (18%)
Query: 102 VEEKFVSRYASEIDGDCLPVTAPSGGDRVYVKI----SSSGVEERVKKLDVRAHSNSLTS 157
+E+K V R A ++ D + VT+ + G RV++ + +G+E R + L V HS
Sbjct: 497 LEKKRVLRRAPILE-DYINVTS-TMGTRVFLVLRDDPCGTGLEVR-RDLKVGGHSTCW-G 552
Query: 158 EPIDVLLQKVEQE--------------AFNKALNSSSEGQS-DRSLPEKPVVHEQ----- 197
P L ++V+QE N L S + +S D S+ P E+
Sbjct: 553 WPFSYLKEQVDQERRRQVLETSQQQTEIINSCLGSEASTKSPDPSMDTAPTAQEESAPHC 612
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LWVDK+ P + ELLSD+ TNR +L WLK WD+ VFG + + A H +S
Sbjct: 613 LWVDKFTPQRYMELLSDDYTNRCLLKWLKLWDTVVFGKDKAGKKPKPSPAA--HPQLSHP 670
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
K+ N+W + LE E HK+ P+ KV LLC
Sbjct: 671 KEHP----------NKWKSKVQLTEEMLEAELDQ--------HKR------PKHKVALLC 706
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQ 362
GPPGLGKTTLAHV A+H GY+ VE+NA + N +L ++Q
Sbjct: 707 GPPGLGKTTLAHVIARHAGYNAVEMNARGEGVLEASINVLLAIIQ 751
>gi|430813748|emb|CCJ28935.1| unnamed protein product [Pneumocystis jirovecii]
Length = 864
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 101/187 (54%), Gaps = 53/187 (28%)
Query: 197 QLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQ 256
QLW +K+AP FT+LL DE+ +REVL W+K WD CVFG S I +
Sbjct: 691 QLWTNKHAPKKFTDLLGDERIHREVLKWIKHWDFCVFGKYCL------------QSKIFE 738
Query: 257 NKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLL 316
+ + ++ F ++ P+QK+L+L
Sbjct: 739 DDHEFNNDFLKR----------------------------------------PKQKILML 758
Query: 317 CGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLV 376
GPPGLGKTTLAH+ A+ GY+++EVNASDDR+S+ ++N+I D + + S+ A+ RP ++
Sbjct: 759 IGPPGLGKTTLAHITARQAGYNIIEVNASDDRTSAVVKNQISDALDIQSIHAN-RPTLII 817
Query: 377 IDEIDGA 383
IDEIDG
Sbjct: 818 IDEIDGV 824
>gi|407920940|gb|EKG14117.1| ATPase AAA+ type core [Macrophomina phaseolina MS6]
Length = 923
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 124/411 (30%), Positives = 192/411 (46%), Gaps = 85/411 (20%)
Query: 146 LDVRAHSNSLTSEPIDVLLQKVEQEAFNKALN---SSSEGQSDRSLPEKPVVHEQLWVDK 202
+D+ + + T++ D + K +Q + +++ + EG S R +PV LW +K
Sbjct: 118 IDIHSLVDEATTQAADEEMSKQQQMDTDVSVDMPMRTIEGPSGRKGGNRPV----LWTEK 173
Query: 203 YAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQND 262
Y FT+L+ DE+T+R VL WLK WD+ VF R + R + I +
Sbjct: 174 YRAKRFTDLVGDERTHRMVLKWLKSWDAIVFPGSARPNPKTA----RAYDRIGAD----- 224
Query: 263 SSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGL 322
+D H+K +LLL GPPGL
Sbjct: 225 ---------------------------------EDYTHRK----------ILLLTGPPGL 241
Query: 323 GKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-------------D 369
GKTTLAHV A+ GY V E+NASD+RS + +I D+V +V
Sbjct: 242 GKTTLAHVCARQAGYEVQEINASDERSKDVVRGRIKDMVGTENVRGIDTKSPTGSKVRKA 301
Query: 370 SRPKCLVIDEIDGALGDGKGA-----VEVILKMVSAERKSNTAKENVAKEDQPEKISKKK 424
+P C+V+DE+DG +G G ++ ++ +V ++K+++ K E K KK+
Sbjct: 302 GKPVCVVVDEVDGVVGGSGGGGEGGFIKALIDLVHLDQKNSSPKTT---ESSAAKTGKKQ 358
Query: 425 GCKKASLLRPVICICNDLYAPALRSLRQ--IAKVHVFIQPSVSRVVSRLKHICNNESMKT 482
G + LLRP+I ICND+Y P+LR LRQ IA++ +P V+ VV RL I E +
Sbjct: 359 G-DRFRLLRPLILICNDVYHPSLRPLRQASIAEIIHVRKPPVNMVVPRLHWIFEKEGIPA 417
Query: 483 SSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRS 533
S + L E T I S + + ++ VM +G + V RK +S++
Sbjct: 418 DSDGVRRLCEAT-WGISSRKDGGGGGTGEGDVRGVMVVG-EWVARKLLSQA 466
>gi|395756246|ref|XP_002833961.2| PREDICTED: chromosome transmission fidelity protein 18 homolog
[Pongo abelii]
Length = 267
Score = 132 bits (333), Expect = 7e-28, Method: Composition-based stats.
Identities = 81/212 (38%), Positives = 119/212 (56%), Gaps = 8/212 (3%)
Query: 342 VNASDDRSSSTIENKILDVVQMNSVM-ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSA 400
+NASDDRS +I QM SV+ A +P CLVIDEIDGA A+ V+L +++
Sbjct: 1 MNASDDRSPEVFRTRIEAATQMESVLGAGGKPNCLVIDEIDGA---PVAAINVLLSILNR 57
Query: 401 ERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFI 460
+ + A P +++ + L+RP+ICICND +AP+LR L+Q A + F
Sbjct: 58 KGPQEVEPQGPA---VPSGGGRRRRAEGGLLMRPIICICNDQFAPSLRQLKQQAFLLHFP 114
Query: 461 QPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFL-DKKKEILNVMD 519
SR+V RL+ + + M L L E T+ DIR+C+NTLQFL + + L+V D
Sbjct: 115 PTLPSRLVQRLQEVSLRQGMWADPGVLAALCEKTDNDIRACINTLQFLYSRGQRELSVRD 174
Query: 520 IGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLR 551
+ + VG KD R F +W+E+FQ + +R R
Sbjct: 175 VQATRVGLKDQRRGLFSVWQEVFQLPRAQRRR 206
>gi|426254967|ref|XP_004021141.1| PREDICTED: LOW QUALITY PROTEIN: chromosome transmission fidelity
protein 18 homolog [Ovis aries]
Length = 879
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/304 (35%), Positives = 149/304 (49%), Gaps = 60/304 (19%)
Query: 125 SGGDRVYVKISS----SGVEERVKKLDVRAHSN-SLTSEPIDVLLQKVEQEAFNKALNSS 179
+GGDR ++ + + +GV+ + R L P L +KV+ E + L +
Sbjct: 171 TGGDRAFLVLRADPVGTGVQSPFRDTRWRGRGQLDLLGMPFASLKEKVDSERRQRLLEEA 230
Query: 180 S----------------EGQSDRSLPEKPVVHEQ-----LWVDKYAPNSFTELLSDEQTN 218
E Q + E+P + LWVD++AP +TELLSD+ TN
Sbjct: 231 QRLSDTLCSLRSQEMEEETQPSGAPEEEPADSQDASQHCLWVDEFAPQRYTELLSDDFTN 290
Query: 219 REVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGN 278
R +L WLK WD VFG E + + R + ++ K+ +S ++W
Sbjct: 291 RCLLKWLKLWDLVVFGRE------KPVRKPRPSAEPTRGGKEATTS-------SKW---- 333
Query: 279 FRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYH 338
S+ + +++ + +G P QKV LLCGPPGLGKTTLAHV A+H GY
Sbjct: 334 ----------KSHEQVLEEMLEAELDPSGRPRQKVALLCGPPGLGKTTLAHVIARHAGYC 383
Query: 339 VVEVNASDDRSSSTIENKILDVVQMNSVM-ADSRPKCLVIDEIDGA-----LGDGKGAVE 392
VVE+NASDDRS +I QM SV+ A RP CLVIDEIDGA LG G +
Sbjct: 384 VVEMNASDDRSPEAFRTRIEAATQMESVLGAGGRPNCLVIDEIDGAPTVGLLGRPAGGL- 442
Query: 393 VILK 396
VIL+
Sbjct: 443 VILQ 446
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 127/278 (45%), Gaps = 25/278 (8%)
Query: 465 SRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEI-LNVMDIGSQ 523
SR+ RL+ I + M+ AL L E T+ DIR+C+N LQFL ++ + L+V + S
Sbjct: 479 SRLTQRLQEISLRQGMRADPGALAALCEKTDNDIRACINALQFLHRRGQRELSVQAVQST 538
Query: 524 VVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDG 583
+G KD + F +W+E+FQ + + V +FD
Sbjct: 539 RIGLKDQRKGLFSVWQEVFQLPRAQSGGVVVVWGGT-------------------GLFD- 578
Query: 584 IHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQ 643
N L+L+ D + LD L DL+ + + Q L Y P L H L +
Sbjct: 579 ---NFLRLRLRDSSLGAVCTALDWLAFDDLLGRAALHGQSFQLMRYLPFLLPAFHLLFAS 635
Query: 644 IQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSP 703
P + +P S Q +N + ++ ++ S I P +R + + LL +
Sbjct: 636 SHVPRITFPSSQQEAQNRMNQTQNLIQTLVSGITP-ATRSRAAPQALILDTLCLLLDILA 694
Query: 704 PTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKS 741
P LRPV+ L SA+EK LA LV M++YSLTY+ ++
Sbjct: 695 PKLRPVSTQLYSAREKQQLASLVGTMLAYSLTYRQDRT 732
>gi|115399948|ref|XP_001215563.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114191229|gb|EAU32929.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 939
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 165/705 (23%), Positives = 279/705 (39%), Gaps = 175/705 (24%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
+W +KY FTEL+ DE+T+R VL WLK W+ VF + RS ++
Sbjct: 207 MWTEKYRARKFTELIGDERTHRAVLRWLKGWEPIVFPNLARSKQKKA------------- 253
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
NN E E + HKK VLLLC
Sbjct: 254 ------------------------GNNQEEE--------ERIHKK----------VLLLC 271
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILD------VVQMNSVMAD-- 369
GPPGLGKTTLAHV ++ GY V+E+NASD+RS ++ +I D V MN + D
Sbjct: 272 GPPGLGKTTLAHVCSRQAGYEVLEINASDERSKDVVKGRIRDALGTENVKGMNVEIGDRK 331
Query: 370 ----SRPKCLVIDEIDGALGDGKGA-----VEVILKMVSAERKSNTAKENVAKEDQPEKI 420
RP C+V+DE+DG + G ++ ++ +V ++K N ++ +
Sbjct: 332 VRKAGRPVCVVVDEVDGVVSGTGGGGEGGFMKALIDLVLLDQK------NSSRSAEQNPT 385
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQ--IAKVHVFIQPSVSRVVSRLKHICNNE 478
++K LRP++ +CND+Y P+LR LR +A++ Q + VVSR++ I E
Sbjct: 386 GRRKRGDNFRFLRPLVLVCNDVYHPSLRPLRTSGVAEMIHVRQAPLENVVSRMRSIFTKE 445
Query: 479 SMKTSSIALTTLAEYT-----------------ECDIRSCLNTLQFLDKKKEILNV---- 517
+ + + L E + E DIRS L +++ K + +
Sbjct: 446 GIPADNDGVRRLCEASWGLARRKQGGTRNSGTAEGDIRSVLVAAEWVAHKLKYESAESCR 505
Query: 518 -------MDIGSQVVGR----KDMSRSAF-DIWKEIFQKRKTKRLRNSVSSSSNVSNEFD 565
+ S G K ++R DI + +F + +S + + FD
Sbjct: 506 LTRRWLEQSVLSDTTGSGSFFKGLNRGGVRDIVERVFA--EGAGFSDSSIGTETFVDPFD 563
Query: 566 --------------------FLHSLISNRGDYD-VIFDGIHENILQLQYHDPVMLKTVKC 604
L ++ G++D I D LQ D + K
Sbjct: 564 NGSGKVPVGVADLRKRHAINRLREMVDASGEHDRCITDCFTSYPLQTFQDDTFLSKPNAA 623
Query: 605 LDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPN--------------LE 650
+ L D + + Q+ L Y + H L +
Sbjct: 624 YEWLHFHDSVSSKVYSNQEWELTPYLSQSVVAFHHLFASAHGKRNHNEVEDEEEEEHPFS 683
Query: 651 WPKSYQRYRNAFMEKMDIFKSWHSKI-PPYISRHLSTESLVEDSISPLLHILSPPTLRPV 709
P++ + + I + S P + ST+ LV D I ++ +LS P ++PV
Sbjct: 684 GPRAEYTANESLKQNRAILTGFQSSFSAPLLRLFRSTDCLVTDLIPNIMRMLS-PDVKPV 742
Query: 710 ALH-------LLSAKEKNDLAQLVSA---MVSYSLTYKNTKSDPLLNNLGNEVSHDVSTL 759
+ + S +++++ A +++A M +T++ + + NE +H
Sbjct: 743 VVRGAGEQRSVASVRKESERALVLAAVRVMTELGVTFERVRVE-------NEGAHGGWVY 795
Query: 760 SFDPPINEFITFKGYR------SNHYVLALAVKQVLVHEVEKQRI 798
+PP++ I+F + S+ + AV+QVL E K+++
Sbjct: 796 RMEPPLDTLISFSKMKGSTQASSSSGPVRYAVRQVLDQEFRKEKV 840
>gi|399218437|emb|CCF75324.1| unnamed protein product [Babesia microti strain RI]
Length = 874
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 133/518 (25%), Positives = 201/518 (38%), Gaps = 146/518 (28%)
Query: 177 NSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSE 236
N+++ G + ++ +K + LWVDKYAP S E +S++ ++++ WLK W +
Sbjct: 352 NTANFGNNCLTMSQK---NSSLWVDKYAPRSIEEFVSNQLQLKKLMEWLKTWKNL----- 403
Query: 237 IRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQ 296
HS S NKK++ SSF
Sbjct: 404 --------------HSGNSDNKKRDRSSF------------------------------- 418
Query: 297 DSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIE-- 354
K LL GPPG+GKTT A + CGY ++E NASD R+ IE
Sbjct: 419 ---------------KCALLSGPPGVGKTTSARLIVASCGYSILEFNASDQRNKQAIEQI 463
Query: 355 ------NKILDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAK 408
L+ N + A++ C+V+DE+DG +G + I +++
Sbjct: 464 AIMATGGITLNFDYTNKLCANT---CIVMDEVDGISSGDRGGSQAIHRLI---------- 510
Query: 409 ENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVV 468
EN + P+ICICND +RSL F PS +V
Sbjct: 511 ENS--------------------ICPIICICNDRNLQKIRSLANKCLDLKFSPPSKMLLV 550
Query: 469 SRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV---- 524
RLK IC E++ + L +L + + DIR C+N LQF K + V
Sbjct: 551 QRLKKICQCENITVNDNTLNSLCDSRQGDIRQCINALQFSSNSKTPFMAKSTSALVEELK 610
Query: 525 VGRKD--MSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFD 582
+G KD + S FDI + +F + N+ F + L DYD++
Sbjct: 611 LGEKDNNLITSPFDITQRLFSPQN--------------PNDLTFTYILDYFFIDYDMVPL 656
Query: 583 GIHENILQLQYHDPVMLKTVKCL----DCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVH 638
IHEN ++ + K L + D++H++I TQQ +V P L
Sbjct: 657 MIHENYIKFIKDSLISGKKWSALCTAAEAFVIGDVIHKHIYNTQQ---FVMLPELGYITA 713
Query: 639 RLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKI 676
L I K Y EK+D F W ++
Sbjct: 714 VLPVVILK---------SLYSGRLTEKLD-FPKWLGRV 741
>gi|367053387|ref|XP_003657072.1| hypothetical protein THITE_2122445 [Thielavia terrestris NRRL 8126]
gi|347004337|gb|AEO70736.1| hypothetical protein THITE_2122445 [Thielavia terrestris NRRL 8126]
Length = 1020
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 173/379 (45%), Gaps = 82/379 (21%)
Query: 179 SSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIR 238
S EGQ ++ P KP LW +KY +F +L+ D+ TNR+VL WLK+WD VF +
Sbjct: 207 SVEGQ--QANPRKPR-RTMLWTEKYRARTFMDLVGDDLTNRQVLRWLKRWDPIVFPHAAK 263
Query: 239 STSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDS 298
S + RRH+ ++ +K
Sbjct: 264 SKPS--VGGGRRHAHQTEEEK--------------------------------------- 282
Query: 299 WHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKIL 358
P +K+L+L GPPGLGKTTLAHV A+ GY V+E+NASD+RS ++ +I
Sbjct: 283 ----------PHRKILVLHGPPGLGKTTLAHVCARQAGYEVMEINASDERSKDVVKGRIR 332
Query: 359 DVVQMNSV--MADSRPKCLVIDEI----------------DGALGDGKGAVEVILKMVSA 400
+ +V + + RP+ ++ G V+ ++ +V
Sbjct: 333 TSLGTENVKTVENRRPEPGKQQKVARPVCVVVDEVDGVVGGSGGSGEGGFVKALIDLVML 392
Query: 401 ERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQ--IAKVHV 458
++++ ++ A + Q +KK +RP+I ICND+Y P+LR LRQ +A+V
Sbjct: 393 DQRNASS----AGDGQSSAGRRKKKGDNFRQMRPLILICNDVYHPSLRPLRQSGLAEVIH 448
Query: 459 FIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKE--ILN 516
+P+V VV+RLK I E + A+ L E + + S ++ + + E +
Sbjct: 449 VGKPTVEAVVNRLKTIFEKEGIPCEKDAVRKLCEAS-WGMTSGIDAKRGAESNAEGDLRG 507
Query: 517 VMDIGSQVVGR-KDMSRSA 534
VM +G V GR + SR A
Sbjct: 508 VMVVGEWVAGRLRSASRDA 526
>gi|429862113|gb|ELA36772.1| chromosome transmission fidelity protein 18 [Colletotrichum
gloeosporioides Nara gc5]
Length = 941
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 180/396 (45%), Gaps = 88/396 (22%)
Query: 160 IDVLLQKVEQEAFNKALNSSSEGQSDRSLPEKPVVHEQ-----LWVDKYAPNSFTELLSD 214
I+ L+ K ++EA K E E+PVV + LW +KY +F +L D
Sbjct: 150 INELIDKAKKEAAEKPKPQRKENDVPVRSVEEPVVGKLQKKTLLWTEKYRAKNFLDLCGD 209
Query: 215 EQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRW 274
+ TNR VL WLK+WD VF + + + R Q +++ +
Sbjct: 210 DGTNRMVLRWLKRWDPIVFPGIAKK------APISRRPGAKQGQQEEEKP---------- 253
Query: 275 SNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKH 334
HKK +L+L GPPGLGKTTLAHV A+
Sbjct: 254 -------------------------HKK----------ILMLTGPPGLGKTTLAHVCARQ 278
Query: 335 CGYHVVEVNASDDRSSSTIENKILDVVQMNSV--------------MADSRPKCLVIDEI 380
GY V+E+NASDDRS ++N+I + SV ++P C+V+DE+
Sbjct: 279 AGYDVMEINASDDRSKDVVKNRIRTSLGTESVKTVENVKTKDGEQQQKVAKPACVVVDEV 338
Query: 381 DGALGDGKGA-----VEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPV 435
DG +G + V+ ++ +V ++K+ + N + KKK L+RP+
Sbjct: 339 DGVVGGAGASGEGGFVKALIDLVLLDQKNGSGIVNNNR--------KKKKGDDFRLMRPL 390
Query: 436 ICICNDLYAPALRSLRQ--IAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEY 493
I ICND+YAPALR LRQ +A++ +P++ VV+RLK + + E + A + E
Sbjct: 391 ILICNDVYAPALRPLRQSGMAEIIHVGKPTIDAVVTRLKAVFDKEGVPCEKDAARKICE- 449
Query: 494 TECDIRSCLNTLQFLDKKKE--ILNVMDIGSQVVGR 527
+ S ++ + + E + VM +G V GR
Sbjct: 450 AAWGMTSGIDAKRGAESGAEGDLRGVMVVGEWVAGR 485
>gi|119482928|ref|XP_001261492.1| sister chromatid cohesion factor (Chl12), putative [Neosartorya
fischeri NRRL 181]
gi|119409647|gb|EAW19595.1| sister chromatid cohesion factor (Chl12), putative [Neosartorya
fischeri NRRL 181]
Length = 940
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 199/883 (22%), Positives = 334/883 (37%), Gaps = 228/883 (25%)
Query: 166 KVEQEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWL 225
K +++ + EGQ ++ + +W +KY FTEL+ DE+ +R VL WL
Sbjct: 181 KAPDRTIQQSVEAPLEGQRNKKMAA------AMWTEKYRARKFTELIGDERIHRSVLRWL 234
Query: 226 KQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNL 285
K W+ VF N S
Sbjct: 235 KGWEPIVF-------------------------------------------PNLAKSRTK 251
Query: 286 EYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNAS 345
+ N+N G + H+K VLLLCGPPGLGKTTLAHV AK GY V+E+NAS
Sbjct: 252 KPGNNNDDG--ERLHRK----------VLLLCGPPGLGKTTLAHVCAKQAGYEVLEINAS 299
Query: 346 DDRSSSTIENKILDVVQMNSVMA------------DSRPKCLVIDEIDGALGDGKGA--- 390
DDRS ++ +I D + +V RP C+V+DE+DG +
Sbjct: 300 DDRSRDVVKGRIRDALGTENVKGVNVEVGDRKVRKAGRPVCVVVDEVDGVVSGSGSGGEG 359
Query: 391 --VEVILKMVSAERKSNTAKENVAKE-DQPEKISKKKGCKKASLLRPVICICNDLYAPAL 447
++ ++ +V ++K N+A+ DQ K KK+ LRP+I +CND+Y P+L
Sbjct: 360 GFMKALIDLVLLDQK------NMARSADQNAKNGKKRKGDTFRFLRPLILVCNDVYHPSL 413
Query: 448 RSLR--QIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYT----------- 494
R LR +A++ Q VVSRLK+I E + + + + L E +
Sbjct: 414 RPLRASSVAEIIHVRQAPFENVVSRLKNILALEGIPSDNDGVRRLCEASWGLARKKSGGL 473
Query: 495 ------ECDIRSCLNTLQFLDKK--KEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRK 546
E DIRS L +++ K E L+ + + + ++ +S +A + + +
Sbjct: 474 KSSGTAEGDIRSVLVAAEWVAHKLRNENLSSLRLTRSWLEQRVLSGTAEASFFKGLNRGG 533
Query: 547 TKRLRNSVS----------------------SSSNV---------SNEFDFLHSLISNRG 575
+ + + V SS NV + + L ++ G
Sbjct: 534 VRDIVDRVFLEGGGFPDAPINAESFHDPFAISSGNVPLGVADLRKRHAINKLREMVDASG 593
Query: 576 DYD-VIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLA 634
D+D + + LQ D + K D L D + + +Q+ L Y
Sbjct: 594 DHDRCVSECFATYPLQSYQDDTFLSKPNAAYDWLHFHDTISSKVFTSQEWELTPYLSQSV 653
Query: 635 ITVHRLVSQIQKPNL----------EWPKSYQRYRNAFMEKMD----IFKSWHSKI-PPY 679
I H L S + + E P S R A E I + S P
Sbjct: 654 IAFHHLFSSVGGKRISKNPDDDEEDEHPFSGPRADFAAFEAQKQSRAILTGFQSSFSAPL 713
Query: 680 ISRHLSTESLVEDSISPLLHILSPPTLRPVALH-------LLSAKEKNDLAQLVSA---M 729
+ ST+ L + I L+ +LS P ++PV + + S +++++ A + +A M
Sbjct: 714 LRLFRSTDCLTTELIPNLIRMLS-PDVKPVVVRGSGEQKSVASVRKESERALVQAAVRVM 772
Query: 730 VSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITF---KGYRSNHYVLA---L 783
+ ++ + + H +PP++ F+TF KG ++ A
Sbjct: 773 AGLGVVFEKVRIEG------EGGGHGGWAYRMEPPLDSFVTFHKIKGTSADSGGSAPVRY 826
Query: 784 AVKQVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTNNAAVSAKLIE 843
AV+QVL E K+ T+ K K G+ + + NA +A I+
Sbjct: 827 AVRQVLDQEYRKE-----TMRKQSEALSSSKAGKSWNGKSGKNDDQSAKKNAIRNAPGIK 881
Query: 844 KSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDRFRKLSGK 903
+ FF R K
Sbjct: 882 R-----------------------------------------------DFFGRILKDPEP 894
Query: 904 VSQDNDNAVQKATVERDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
+ Q +D++ + + + +++GF+NAV++P+ M + +
Sbjct: 895 LPQSSDDSPVQNEASKAGRKVWITYHDGFSNAVRKPISMNELM 937
>gi|82541068|ref|XP_724804.1| replication factor C, 140 kDa subunit [Plasmodium yoelii yoelii
17XNL]
gi|23479576|gb|EAA16369.1| replication factor C, 140 kDa subunit [Plasmodium yoelii yoelii]
Length = 888
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 154/373 (41%), Gaps = 102/373 (27%)
Query: 166 KVEQEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWL 225
K EQE N S GQ ++S+ + P V QLWVDKY P +L+ + Q ++ WL
Sbjct: 307 KHEQEQ-NMPYQSVKTGQ-EQSVKKVPQVLNQLWVDKYKPTKLEDLVGNTQNVFKLKTWL 364
Query: 226 KQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNL 285
WD I+ ++V R GNF N N
Sbjct: 365 SSWDDVC----IKGLKKQVTKTFR---------------------------GNFENIN-- 391
Query: 286 EYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNAS 345
K LL GP G+GKTT A + + GY+V+E NAS
Sbjct: 392 -------------------------AKCALLSGPAGIGKTTTAKIVSMDSGYNVIEFNAS 426
Query: 346 DDRSSSTIENKILDVV----QMNSVMADSRPK-CLVIDEIDGALGDGKGAVEVILKMVSA 400
D+R+ + +E KI ++ + S+ S K C+++DE+DG KG ILK++
Sbjct: 427 DERNKAAVE-KISEMATGGYSITSLNNKSLKKTCIIMDEVDGMSSGDKGGSSAILKLI-- 483
Query: 401 ERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFI 460
+K C P+ICICND +R+L F
Sbjct: 484 ---------------------EKTKC-------PIICICNDRQNSKMRTLANKCYDLKFT 515
Query: 461 QPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDI 520
P+ + VV RL IC NE++ AL L E + DIR LN LQ L K + + +DI
Sbjct: 516 TPNKNSVVKRLLEICKNENLMMEPNALELLWESSNGDIRQILNALQLLSKTYKRIQFLDI 575
Query: 521 GSQVVGRKDMSRS 533
+KD++ S
Sbjct: 576 ------KKDINNS 582
>gi|134075822|emb|CAK39356.1| unnamed protein product [Aspergillus niger]
Length = 1080
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 150/561 (26%), Positives = 236/561 (42%), Gaps = 111/561 (19%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS 370
+KVLLLCGPPGLGKTTLAHV A+ GY V+E+NASDDRS ++ +I D + +
Sbjct: 457 RKVLLLCGPPGLGKTTLAHVCARQAGYEVLEINASDDRSKDVVKGRIRDSLGTENA---G 513
Query: 371 RPKCLVIDEIDGALGDGKGA-----VEVILKMVSAERKSNTAKENVAKEDQPEKISKKKG 425
RP C+V+DE+DG + G ++ ++ +V ++K+++ K +KK
Sbjct: 514 RPVCVVVDEVDGVVSGSGGGGEGGFMKALIDLVLLDQKNSSGSTEQTK-------GRKKK 566
Query: 426 CKKASLLRPVICICNDLYAPALRSLR--QIAKVHVFIQPSVSRVVSRLKHICNNESMKTS 483
LRP+I +CND+Y P+LR LR +A++ Q + VV+R+K I E + +
Sbjct: 567 GDNFRFLRPLIMVCNDVYHPSLRPLRAASVAEIIHVRQAPLENVVTRMKRIFTVEGIPSD 626
Query: 484 SIALTTLAEYTECDIRSCLNTLQFLDKK-----------------KEILNVMDIGSQVV- 525
+ + AE DIRS L +++ K +++L+ GS
Sbjct: 627 NDGSSGTAE---GDIRSVLVAAEWVAHKLRNECPSTLRLTRSWLEQKVLSANSSGSAFFK 683
Query: 526 -----GRKDMSRSAF-------------DIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFL 567
G +D+ F D +++ F + KRLR V +S
Sbjct: 684 GLNRGGVRDLIERVFTEGAGFTDAPVGVDSFRDPFSNSEDKRLREMVDAS---------- 733
Query: 568 HSLISNRGDYD-VIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPL 626
G++D + + LQ D + K D L D M + Q L
Sbjct: 734 -------GEHDRAVAECFASYPLQSYQDDTFLSKPNAAYDWLHFHDTMSSKVYTAQDWEL 786
Query: 627 YVYQPPLAITVHRLVSQIQ----KPNL-----EWPKSYQRYRNAFMEKMD----IFKSWH 673
Y + H L + Q P + E P S R A E I +
Sbjct: 787 SAYLSQSVVAFHHLFATAQGKAKAPEINDEEEEHPFSGPRADFAAYEAQKQNRAILTEFQ 846
Query: 674 SKIPPYISRHL-STESLVEDSISPLLHILSPPTLRPVALH----------LLSAKEKNDL 722
S +SR ST+SLV D I L+ +LSP ++PV + + E+ +
Sbjct: 847 SAFSAPLSRLFRSTDSLVIDLIPNLVRMLSP-DVKPVVVRGSGEQRSVASVRKESERTLI 905
Query: 723 AQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYR-----SN 777
V M + ++ + + N G +H +PP++ FITF + S
Sbjct: 906 QAAVRVMAGLGVRFEKVR----IENAG---AHGGWAYRMEPPLDTFITFSKTKSAPTASG 958
Query: 778 HYVLALAVKQVLVHEVEKQRI 798
+ A++QVL E K+ I
Sbjct: 959 SAPVRYAIRQVLDQEYRKENI 979
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEE 243
+W +KY FTEL+ DE+T+R VL WLK W+ VF + RS +++
Sbjct: 400 MWTEKYRARKFTELIGDERTHRSVLRWLKAWEPIVFPNIARSKAKK 445
>gi|402590260|gb|EJW84191.1| hypothetical protein WUBG_04896 [Wuchereria bancrofti]
Length = 672
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 164/686 (23%), Positives = 282/686 (41%), Gaps = 148/686 (21%)
Query: 115 DGDCLPVTAPSGGDRVYVKISSSGVEERVKKLDVRAHSNSLTSEPIDVLLQKVEQEAFNK 174
D + T P+ R Y+ + S+ E+ V D S TS +KV F+
Sbjct: 128 DASWIGFTDPTELQRFYIVLRSA--EQTVHNGD---GDKSRTSTLKFGFTEKVLNSGFDF 182
Query: 175 ALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFG 234
+ S G ++ E + + LW++KYAP+++ +L+SDE NR +L WL+ WD CVF
Sbjct: 183 EVPSIVSGDTEE---ESAFIQDNLWIEKYAPHTYADLISDETVNRLLLNWLRLWDECVFH 239
Query: 235 SEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKG 294
++ S+ VL RG SN +
Sbjct: 240 ---KAVSDIVL------------------------RGA-----------------SNQQQ 255
Query: 295 IQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIE 354
+ S K R P KV+LL GP G GKTTLA + A+H GY VV +NASD+R+++ +
Sbjct: 256 LLLSNEKPRR----PSHKVVLLAGPAGTGKTTLAALVAQHVGYRVVSLNASDERNTADFK 311
Query: 355 NKILDVVQMNSVM-ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAK 413
D ++ + ADS+P CL++DEIDGA ++ + K V+A V +
Sbjct: 312 KCFEDALRTTRTLDADSKPNCLILDEIDGA---PTQSIHYLCKAVTA----------VGR 358
Query: 414 EDQPEKISKKKGCK-KASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLK 472
ISK + K ++S L +I C+ A+ +L+ IA +
Sbjct: 359 HSLRRPISKLEHLKVESSALSEIIAACSRDLRSAINNLQFIASKN--------------- 403
Query: 473 HICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSR 532
C KT L+F +++K+ + +
Sbjct: 404 --CTKVDRKT---------------------VLKFCEREKQFGD---------------K 425
Query: 533 SAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQ 592
S FD W +F+ + + ++ + + L N + D + G+ N L+ +
Sbjct: 426 SLFDSWASVFEISRHLDANGRIQGVASRVKQITLISELHGN--ETDRFYLGLFTNYLKSK 483
Query: 593 YHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWP 652
+ V++ T + L D + Q L Y + +++H L+ + +L +P
Sbjct: 484 -NATVLMNTAMAIRQLCYYDRIVTSANSAQDYSLLKYLSAVCVSMHMLLCCRGRTHLSFP 542
Query: 653 KSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALH 712
Y + + ++I +S + ++LS ++ + I P L + P +P+ +
Sbjct: 543 TDYHSAVQRYEQSVEIVESVRAGAT---QKNLSLSTIALE-ILPYLISIVQPDFKPMNVQ 598
Query: 713 LLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFK 772
L S +E + L +VS M +Y LT+ + D + + F P I + + F
Sbjct: 599 LYSVRELDLLHSIVSIMRTYFLTFTSVLQDESV------------SFVFKPAIEQLVMFT 646
Query: 773 ---GYRSNHY--VLALAVKQVLVHEV 793
RSN L+ A +Q++ HEV
Sbjct: 647 DDDACRSNRSSNTLSDAARQLIAHEV 672
>gi|258565311|ref|XP_002583400.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237907101|gb|EEP81502.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 900
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 194/857 (22%), Positives = 330/857 (38%), Gaps = 223/857 (26%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LW +KY F +L+ D++T+R VL WLK WD VF S ++++
Sbjct: 156 LWTEKYRARRFKDLIGDDRTHRAVLRWLKGWDPIVFPS------------------LAKS 197
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
K QN ++ +LE N++ +K+LLL
Sbjct: 198 KAQNKTA-------------------DLEEPNTH-------------------RKILLLT 219
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMN-----SVMADSR- 371
GPPGLGKTTLAHV AK GY V+E+NASD+RS ++ +I D V SV+AD R
Sbjct: 220 GPPGLGKTTLAHVCAKQAGYEVLEINASDERSRDVVKGRIKDAVGTENVKSVSVIADGRQ 279
Query: 372 ----------PKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKIS 421
V + G+ G G ++ ++ +V+ ++K++ + D
Sbjct: 280 IRKPGRPVCVVVDEVDGVVGGSGGGEGGFMKALIDLVTLDQKNSKR----SPTDSTNNTK 335
Query: 422 KKKGCKKASLLRPVICICNDLYAPALRSLR--QIAKVHVFIQPSVSRVVSRLKHICNNES 479
KKKG K L+RP+I ICND+Y P+LR LR IA++ Q + +VV R+KH+ E
Sbjct: 336 KKKG-DKFRLMRPLILICNDVYHPSLRPLRTSSIAEIIHVRQVPLDQVVQRMKHVFEKEG 394
Query: 480 MKTSSIALTTLAE-----------------YTECDIRSCLNTLQFLDKKKEILNVMD--- 519
+ A+ + E +E DIR L +++ +K +
Sbjct: 395 ISCDGDAVRRICEASWGLSATRDRQVKSRGISEGDIRGVLVAGEWIARKLRYAGSLSSNM 454
Query: 520 ------IGSQVVGR--KDMSRSAF------DIWKEIF--------QKRKTKRLRNSVSSS 557
+ ++G KD S +I + +F + K ++ ++
Sbjct: 455 RLTRAWVEQHILGESSKDGSIPGLGRGGTKEIVERVFLEGAGFSYDRVGNKSFKDPYGTN 514
Query: 558 SNV-----------SNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVML-KTVKCL 605
S+ + + L ++ G+YD Y D L K
Sbjct: 515 SDTITPVGVADLRKRHAINRLTEMVDATGEYDRCVADCFLTYPTKAYQDDTFLSKPNAAY 574
Query: 606 DCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQR-------- 657
+ L DL + Q L Y I H L S + NL KS +
Sbjct: 575 EWLHFHDLATSRMYANQDWELNKYLSQTVIAFHHLFSSPNRANLAERKSEKSEEEHPFLS 634
Query: 658 ----YRNAFMEKMD--IFKSWHSKI-PPYISRHLSTESLVEDSISPLLHILSPPTLRPVA 710
Y +EK + I + S + P + LS ++ + + L+ +L+ P ++PV
Sbjct: 635 PRADYTAFEIEKQNRAILTEFKSTLSAPLLRIFLSPGTIATELVPNLMRMLA-PEIKPVI 693
Query: 711 L-------HLLSAKEKNDLAQLVSA---MVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLS 760
+ + S +++++ A + SA M +T++ T+ + +H
Sbjct: 694 VGGSGSERGIASVRKESERALVQSAVRVMNGLGVTFERTRVEV------ESGAHGGWVYR 747
Query: 761 FDPPINEFITFKGYRSNHYVLA-------LAVKQVLVHEVEKQRIMQVTIGKSEHLADGY 813
+P ++ +F + A AV+QVL E K + + +++ D Y
Sbjct: 748 MEPALDSLASFFNTKGTSMASAGSSAPVRYAVRQVLDQEYRKDLLKR----QAQSRQDRY 803
Query: 814 KENMDLAGEEDSKTESAKTNNAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTA 873
LA + + TE +K N Q + + S+ LT
Sbjct: 804 DNPRSLASKRSNNTEQSKEN-------------------QGSDAKSSRLTG--------- 835
Query: 874 SVKPKSSGDTKKSFRSSSSFFDRF----RKLSGKVSQDNDNAVQKATVERDSLPLLFKFN 929
PK FF R L + +++ N +RD + ++
Sbjct: 836 ---PK------------RDFFGRVIVNSESLPSRSTEEGKNQKLDGQKQRDEKKVWVSYH 880
Query: 930 EGFTNAVKRPVRMRDFL 946
EGF+NAV++ + M + +
Sbjct: 881 EGFSNAVRKRITMHELM 897
>gi|70986950|ref|XP_748961.1| sister chromatid cohesion factor (Chl12) [Aspergillus fumigatus
Af293]
gi|66846591|gb|EAL86923.1| sister chromatid cohesion factor (Chl12), putative [Aspergillus
fumigatus Af293]
gi|159123269|gb|EDP48389.1| sister chromatid cohesion factor (Chl12), putative [Aspergillus
fumigatus A1163]
Length = 940
Score = 130 bits (327), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 179/718 (24%), Positives = 282/718 (39%), Gaps = 176/718 (24%)
Query: 181 EGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRST 240
EGQ ++ + +W +KY FTEL+ DE+ +R VL WLK W+ VF
Sbjct: 196 EGQRNKKMAA------AMWTEKYRARKFTELIGDERIHRSVLRWLKGWEPIVF------- 242
Query: 241 SEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWH 300
N S + N+N G + H
Sbjct: 243 ------------------------------------PNLAKSRIKKPGNNNDDG--ERLH 264
Query: 301 KKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDV 360
+K VLLLCGPPGLGKTTLAHV AK GY V+E+NASDDRS ++ +I D
Sbjct: 265 RK----------VLLLCGPPGLGKTTLAHVCAKQAGYEVLEINASDDRSKDVVKGRIRDA 314
Query: 361 VQMNSVMA------------DSRPKCLVIDEIDGALGDGKGA-----VEVILKMVSAERK 403
+ +V RP C+V+DE+DG + ++ ++ +V ++K
Sbjct: 315 LGTENVKGVNVEVGDRKVRKAGRPVCVVVDEVDGVVSGSGSGGEGGFMKALIDLVLLDQK 374
Query: 404 SNTAKENVAKE-DQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLR--QIAKVHVFI 460
N+A+ DQ K KK+ LRP+I +CND+Y P+LR LR +A++
Sbjct: 375 ------NMARSADQNAKNGKKRKGDTFRFLRPLILVCNDVYHPSLRPLRTSSVAEIIHVR 428
Query: 461 QPSVSRVVSRLKHICNNESMKTSSIALTTLAEYT-----------------ECDIRSCLN 503
Q VVSRLK I E + + + + L E + E DIRS L
Sbjct: 429 QAPFENVVSRLKSILALEGIPSDNDGVRRLCEASWGLARKKSGGLKSSGTAEGDIRSVLV 488
Query: 504 TLQFLDKKKEILN--------------VMDIGSQVVGRKDMSRSAF-DIWKEIFQK---- 544
+++ K N V+ ++ K ++R DI +F +
Sbjct: 489 AAEWVAHKLRNENLSSLRLTRSWLEQRVLSGAAEASFFKGLNRGGVRDIVDRVFLEGGGF 548
Query: 545 ----RKTKRLRNSVSS-SSNV---------SNEFDFLHSLISNRGDYD-VIFDGIHENIL 589
+ + +S S NV + + L ++ GD+D + + L
Sbjct: 549 PDAPMNAESFHDPFASPSGNVPLGVADLRKRHAINKLREMVDASGDHDRCVSECFATYPL 608
Query: 590 QLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNL 649
Q D + K D L D + + +Q+ L Y I H L S + +
Sbjct: 609 QSYQDDTFLSKPNAAYDWLHFHDTISSKVFASQEWELTPYLSQTVIAFHHLFSSVGGKRI 668
Query: 650 ----------EWPKSYQRYRNAFMEKMD----IFKSWHSKI-PPYISRHLSTESLVEDSI 694
E P S R A E I + S + P + S + L + I
Sbjct: 669 SKNFDDDEEDEHPFSGPRADFAAFEAQKQSRAILTGFQSSLSAPLLRLFRSMDCLATELI 728
Query: 695 SPLLHILSPPTLRPVALH-------LLSAKEKNDLAQLVSA---MVSYSLTYKNTKSDPL 744
L+ +LS P +RPV + + S ++ ++ A + +A M + ++ +
Sbjct: 729 PNLIRMLS-PDVRPVVVRGSGEQKSVASVRKDSERALVQAAVRVMTGLGVVFEKVR---- 783
Query: 745 LNNLGNEVSHDVSTLSFDPPINEFITF---KGYRSNHYVLA---LAVKQVLVHEVEKQ 796
+ + G H +PP++ +TF KG ++ A AV+QVL E K+
Sbjct: 784 IESEGG--GHGGWAYRMEPPLDSLVTFHKTKGTSADSGGTAPVRYAVRQVLDQEYRKE 839
>gi|330929355|ref|XP_003302614.1| hypothetical protein PTT_14492 [Pyrenophora teres f. teres 0-1]
gi|311321947|gb|EFQ89315.1| hypothetical protein PTT_14492 [Pyrenophora teres f. teres 0-1]
Length = 1079
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 111/376 (29%), Positives = 171/376 (45%), Gaps = 92/376 (24%)
Query: 182 GQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTS 241
G+S+R+L +W +KY FT+L+ DE+T+R VL WLK WD VF
Sbjct: 334 GKSNRTL---------MWTEKYRAKKFTDLVGDERTHRSVLRWLKAWDPIVFPG------ 378
Query: 242 EEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHK 301
K + + NG +E K H+
Sbjct: 379 ------------------------ASKAKVKKAPNG---------FEEDEQK------HR 399
Query: 302 KT-RSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDV 360
K TGPP GLGKTTLAHV A+ GY V E+NASD+RS + ++ +I D+
Sbjct: 400 KILLLTGPP-----------GLGKTTLAHVCARQAGYEVQEINASDERSGNVVKGRIRDM 448
Query: 361 VQMNSVMA------------DSRPKCLVIDEIDGALGDGKGA-----VEVILKMVSAERK 403
V +V +P C+++DE+DG +G G+ V+ ++ +V+ + K
Sbjct: 449 VGTENVRGVNTSTVKGKIRKAGKPVCVIVDEVDGVVGGSGGSGEGGFVKALIDLVNLDEK 508
Query: 404 SNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQ--IAKVHVFIQ 461
++ + Q +KKK + LLRP+I ICND+Y P+LR LRQ +A++ +
Sbjct: 509 NS----KTLGQQQSTTTTKKKKGDRFRLLRPLILICNDVYHPSLRPLRQSSMAEIVHIRK 564
Query: 462 PSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIG 521
P++S VVSR++ I E ++ S + L E T + +I VM +
Sbjct: 565 PALSMVVSRMQDIFTKEGIQCDSDGVRRLCEATWGVSTKKEGGTGSGTGEGDIRGVMVVA 624
Query: 522 SQVVGRKDMSRSAFDI 537
+ GR RS+ D+
Sbjct: 625 EWIAGR---LRSSHDV 637
>gi|409082052|gb|EKM82410.1| hypothetical protein AGABI1DRAFT_89230 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 809
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 101/203 (49%), Gaps = 51/203 (25%)
Query: 196 EQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTIS 255
+ LWVD+Y P FT+L+ +++ RE + W+KQWD CVF
Sbjct: 162 DTLWVDRYRPTCFTDLIGNDRVARETMAWVKQWDYCVF------------------GKKK 203
Query: 256 QNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLL 315
K+Q D E EN N+ D +H+ P +K+LL
Sbjct: 204 GKKRQRD-----------------------EDENFNA---DDEYHR-------PREKMLL 230
Query: 316 LCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCL 375
L GPPGLGKTTLAH+ A+H GY VVE+NASD R + I ++I ++ S + ++P +
Sbjct: 231 LSGPPGLGKTTLAHIVARHAGYDVVEINASDARGGNVINDRIRPTLESGSSVNGTKPVLV 290
Query: 376 VIDEIDGALGDGKGAVEVILKMV 398
+IDEIDGA G G I +V
Sbjct: 291 IIDEIDGATGAGDNTSSFIHNLV 313
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 78/381 (20%), Positives = 150/381 (39%), Gaps = 54/381 (14%)
Query: 537 IWKEI--------FQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENI 588
+W+E+ + KR+++ + S + L I G I +G E+
Sbjct: 373 LWREVTFVGALIHYSPLTKKRVKDLALTEEQESRYINRLSFEIEGSGKDAAIANGCFEHY 432
Query: 589 LQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPN 648
L+ HD + + L DL+ + L Y P + + L
Sbjct: 433 ATLRQHDANFSRYESGNEWLITYDLLSSSMFADGDFALLSYLPFTLVPFYPLFQARSSQR 492
Query: 649 LEWPKSYQRYRNAFMEKMDIFKSWHSKIPPY------ISRHLSTESLVEDSISPLLH-IL 701
+E S + +I++S+ + RHL T ++ +PL++ I+
Sbjct: 493 IERNYSDWEHHQVTKSNEEIYESFARCLRSASLRCGGAYRHLVTSPTLQLEFTPLINRII 552
Query: 702 SPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSF 761
SPP LRPV ++ +E+ L +LV M + L + +++ ++S+ +
Sbjct: 553 SPP-LRPVNRQVIRPEERLLLERLVEIMAALELRFVQDRAE------DGQLSYRL----- 600
Query: 762 DPPINEFITFKGYRSNHYVLA-LAVKQVLVHEVEKQ------RIMQVTIGKSEHLADGYK 814
DPPI+ FIT+ R+N + A++ ++ EV+ + ++++ G H+
Sbjct: 601 DPPIDVFITYDAKRANDIAPSRYAIRHLVATEVDTKLAAKDFNVVELEKGGKRHV----- 655
Query: 815 ENMDLAGEEDSKTESAKTNNAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTAS 874
+ K S T S + ++ K+ P + + T + + A+
Sbjct: 656 ---------NRKITSGNTEAEVPSERATKRQKTAPLALEDRTPTD----FFGRAITVNAA 702
Query: 875 VKPKSSG--DTKKSFRSSSSF 893
KPKS+ T KS+R S F
Sbjct: 703 AKPKSAAQKQTAKSYRVSYKF 723
>gi|452845716|gb|EME47649.1| hypothetical protein DOTSEDRAFT_86095 [Dothistroma septosporum
NZE10]
Length = 851
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 150/324 (46%), Gaps = 94/324 (29%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LW +KY FT+L+ DE+T+R V+ WLK+WD VF R +
Sbjct: 127 LWTEKYRAKKFTDLVGDERTHRAVMHWLKRWDQIVFPGSYRPKPK--------------- 171
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
KQ D N+ +E + P +K+L+L
Sbjct: 172 AKQGD---------------------NVAFEET------------------PHRKILMLT 192
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM-ADSRPKCLV 376
GPPGLGKTTLAHV AK GY V E+NASD+RSS+ ++ +I D+V +V AD++
Sbjct: 193 GPPGLGKTTLAHVCAKQAGYEVQEINASDERSSTVVKGRIRDMVGTENVKGADTK----- 247
Query: 377 IDEIDGAL-GDGKGA----------------------VEVILKMVSAERKSNTAKENVAK 413
+DG GK V+ ++ +V ++K+++A +++
Sbjct: 248 --TVDGQTRKAGKPVCVVVDEVDGVVGGSGGSGEGGFVKALIDLVMLDQKNSSALSTLSQ 305
Query: 414 EDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQ--IAK-VHVFIQPSVSRVVSR 470
++K + LLRP+I +CND+Y PALR LRQ +A+ +HV P + + +R
Sbjct: 306 AP-----ARKMKGDRFRLLRPLILVCNDVYHPALRPLRQSNLAEIIHVRKAP-IQTITTR 359
Query: 471 LKHICNNESMKTSSIALTTLAEYT 494
L+ + E ++ + L E T
Sbjct: 360 LQQVLQKEGVRCEVDGVRRLCEAT 383
>gi|407400032|gb|EKF28522.1| hypothetical protein MOQ_007730 [Trypanosoma cruzi marinkellei]
Length = 1016
Score = 129 bits (324), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 131/279 (46%), Gaps = 78/279 (27%)
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVV------- 361
PE+++ +L GPPG+GKTTLAHV A HCGY VE+NAS DR+SS +E I V
Sbjct: 293 PEERLAVLVGPPGVGKTTLAHVLAAHCGYETVEINASVDRTSSAMERAIQLAVSPARGRR 352
Query: 362 -------------------QMNSVMADS---------RPKCLVIDEIDGALGDGKGAVEV 393
+ S ++ RPKCL+IDE+DG
Sbjct: 353 RALPLSSLSTSSSNVDGASKATSKTGEAGVSLVDMLLRPKCLIIDEMDG----------- 401
Query: 394 ILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQI 453
++A S ++++ C PV C+CND Y P+LRSLR+
Sbjct: 402 ----IAANVASFLLQQDIH-------------C-------PVFCLCNDFYVPSLRSLRRQ 437
Query: 454 AKVHVFIQPSV--SRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKK 511
HV+ P + R++SRL I E + S AL L + + D+R CLNTLQFL +
Sbjct: 438 CH-HVYYFPPIRPQRLLSRLSEIVELEGLSVSKPALADLVQSSNGDVRCCLNTLQFLCRH 496
Query: 512 KEI----LNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRK 546
+ + + + ++ G KD +D W+ F++++
Sbjct: 497 TSLSGEERDPLQLMREMQG-KDSKLGLWDTWRLFFERQE 534
>gi|189198279|ref|XP_001935477.1| chromosome transmission fidelity protein 18 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187981425|gb|EDU48051.1| chromosome transmission fidelity protein 18 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 1079
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 128/236 (54%), Gaps = 23/236 (9%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-- 368
+K+LLL GPPGLGKTTLAHV A+ GY V E+NASD+RS + ++ +I D+V +V
Sbjct: 399 RKILLLTGPPGLGKTTLAHVCARQAGYEVQEINASDERSGNVVKGRIRDMVGTENVRGVN 458
Query: 369 ----------DSRPKCLVIDEIDGALGDGKGA-----VEVILKMVSAERKSNTAKENVAK 413
+P C+++DE+DG +G G+ V+ ++ +V+ + K++
Sbjct: 459 TSTINGKIRKAGKPVCVIVDEVDGVVGGSGGSGEGGFVKALIDLVNLDEKNS----KTLG 514
Query: 414 EDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQ--IAKVHVFIQPSVSRVVSRL 471
+ Q SKKK + LLRP+I ICND+Y P+LR LRQ +A++ +P++S VVSR+
Sbjct: 515 QQQSTTSSKKKKGDRFRLLRPLILICNDVYHPSLRPLRQSSMAEIVHIRKPALSMVVSRM 574
Query: 472 KHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGR 527
+ I E ++ S + L E T + +I VM + + GR
Sbjct: 575 QDIFTKEGIQCDSDGVRRLCEATWGVSTKKEGGTGSGTGEGDIRGVMVVAEWIAGR 630
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 9/52 (17%)
Query: 182 GQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVF 233
G+S+R+L +W +KY FT+L+ DE+T+R VL WLK WD VF
Sbjct: 334 GKSNRTL---------MWTEKYRAKKFTDLVGDERTHRSVLRWLKAWDPIVF 376
>gi|209879435|ref|XP_002141158.1| hypothetical protein [Cryptosporidium muris RN66]
gi|209556764|gb|EEA06809.1| hypothetical protein, conserved [Cryptosporidium muris RN66]
Length = 918
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 150/320 (46%), Gaps = 69/320 (21%)
Query: 202 KYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQN 261
KY P S+ ++++DE+T R +L W+KQW+ +FG ++ R+ ++ + +
Sbjct: 247 KYKPKSYLDIINDEETVRNILKWIKQWEGYIFGKKV------------RNLKLADMEDEI 294
Query: 262 DSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPG 321
DS + + P +LL+ GP G
Sbjct: 295 DS-------------------------------------RNEEAKEAPNNPILLVGGPSG 317
Query: 322 LGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-DSRPKCLVIDEI 380
GKT+L ++ AK CGY+ EV D+RSS+ IEN I + N++ +S+P ++IDE+
Sbjct: 318 CGKTSLINILAKQCGYNTYEVRLDDERSSARIENSIKIGIGFNTIQGVNSKPNLVLIDEL 377
Query: 381 DGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKIS---KKKGCKKASL---LRP 434
D L + S K + E V K P+ IS K K +L RP
Sbjct: 378 DSILSNS-----------SPGSKCHNNDEQV-KGQSPDCISYLIKLLDQHKKTLDIIKRP 425
Query: 435 VICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSI-ALTTLAEY 493
VIC+C+D+Y +LR+LR + P + +V RL IC E+++ LT LA
Sbjct: 426 VICLCSDIYNKSLRNLRLKVPNIILKTPKIEKVTKRLSFICEKENIELEDQDILTRLAIA 485
Query: 494 TECDIRSCLNTLQFLDKKKE 513
DIRSCLN+L+ + +K++
Sbjct: 486 HNGDIRSCLNSLELMIQKEK 505
>gi|82540736|ref|XP_724663.1| ATPase, AAA family [Plasmodium yoelii yoelii 17XNL]
gi|23479384|gb|EAA16228.1| ATPase, AAA family, putative [Plasmodium yoelii yoelii]
Length = 1049
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 111/197 (56%), Gaps = 25/197 (12%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSR 371
K+LLL G G GKTTLA+V A H ++V+E+N SDDR+ T+ I +V NS+ S+
Sbjct: 316 KILLLGGSAGKGKTTLAYVIANHFKFNVIEINGSDDRNKETLIPFIESIVCNNSI--GSK 373
Query: 372 PKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASL 431
P +IDEIDG L +E I+ ++ + K N + + K
Sbjct: 374 PNICIIDEIDG-LSSTYQNIEAIMNFLNKKDKKNMS---IIK------------------ 411
Query: 432 LRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLA 491
RP+ICICND+Y L+ LR+I+KV + ++ + R+ +IC+ E++K S+ A+ L
Sbjct: 412 -RPIICICNDIYHKTLKELRKISKVVLVENVNIQMLKGRINYICDKENIKISNEAINKLI 470
Query: 492 EYTECDIRSCLNTLQFL 508
+ + D+R+ LNT+ FL
Sbjct: 471 DIYKSDVRAILNTIYFL 487
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 11/81 (13%)
Query: 163 LLQKVEQEAFNK---------ALNSSSEGQSDRS-LPEKPVVHEQL-WVDKYAPNSFTEL 211
+L +++QE +K + N+ Q+D S + + ++ E + +V+KY F+EL
Sbjct: 209 VLNEIKQENIDKENKKKYEYTSTNNLMSKQNDESNMSCQKMITENINFVEKYRGKYFSEL 268
Query: 212 LSDEQTNREVLLWLKQWDSCV 232
L+DE NREVLLW+KQW+ +
Sbjct: 269 LTDETINREVLLWIKQWNDLI 289
>gi|326485261|gb|EGE09271.1| sister chromatid cohesion factor [Trichophyton equinum CBS 127.97]
Length = 908
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 156/337 (46%), Gaps = 81/337 (24%)
Query: 179 SSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIR 238
S E Q+ S+P +LW +KY SF +L+ D++T+R VL WLK WD VF
Sbjct: 138 SVETQAQGSVPGTAKPAHRLWTEKYRARSFKDLIGDDRTHRTVLRWLKAWDPIVF----- 192
Query: 239 STSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDS 298
+++ K + D NF N DS
Sbjct: 193 -------------PGLAKPKVKKD---------------NFSN---------------DS 209
Query: 299 WHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKIL 358
+ R K+LLL GPPGLGKTTLAH+ AK GY V+E+NASD+RS + + +I
Sbjct: 210 EERAHR-------KILLLTGPPGLGKTTLAHICAKQVGYEVLEINASDERSRTVVTGRIK 262
Query: 359 DVVQMNSVMA------------DSRPKCLVIDEIDGALGDGKGA-----VEVILKMVSAE 401
D V +V +P C++IDE+DG +G G ++ ++ +V +
Sbjct: 263 DAVGTENVRGVTIVEDGKVIRKPGKPVCVIIDEVDGVVGGSGGGGEGGFMKALIDLVQLD 322
Query: 402 -RKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQ--IAK-VH 457
R S+ +K + + K LLRP+I ICND+Y P+LR LRQ IA+ +H
Sbjct: 323 LRNSSRSKTDGQGTGRKGKKKG----DNFRLLRPLILICNDVYHPSLRPLRQASIAEIIH 378
Query: 458 VFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYT 494
V P +VV R+K I E ++ + L E T
Sbjct: 379 VRRVP-FDQVVQRVKSIFEKEGIQCDADGARKLCETT 414
>gi|242810288|ref|XP_002485551.1| sister chromatid cohesion factor (Chl12), putative [Talaromyces
stipitatus ATCC 10500]
gi|218716176|gb|EED15598.1| sister chromatid cohesion factor (Chl12), putative [Talaromyces
stipitatus ATCC 10500]
Length = 1151
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 206/890 (23%), Positives = 335/890 (37%), Gaps = 256/890 (28%)
Query: 185 DRSLPEKPVVHEQ-------LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEI 237
+RS+ E PV+ + +W +KY F EL+ DE+T+R VL WLK WD VF
Sbjct: 387 ERSI-ETPVIEKSGKKNSNPMWTEKYRARRFAELIGDERTHRSVLRWLKSWDHIVFPGIA 445
Query: 238 RSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQD 297
+S +H+ KN G +
Sbjct: 446 KS----------KHA---------------KN------------------------GTEG 456
Query: 298 SW-HKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENK 356
W H+K +L+L GPPGLGKTTLAHV A+ GY V+E+NASD+RS ++ +
Sbjct: 457 EWAHRK----------ILMLTGPPGLGKTTLAHVCAQQAGYEVLEINASDERSRDVVKGR 506
Query: 357 ILDVVQMNSVMADS------------RPKCLVIDEIDGALGDGKGA-----VEVILKMVS 399
I D V +V + S RP C+V+DE+DG +G ++ ++ +V
Sbjct: 507 IRDAVGTENVKSISAGSDSSKANKSGRPVCVVVDEVDGVVGGSGSGGEGGFIKALIDLVM 566
Query: 400 AERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLR--QIAKVH 457
++K+ A+ DQ +KK LLRP+I ICND Y +LR LR IA++
Sbjct: 567 MDQKT-----AAARSDQNSFSGRKKKNDNFRLLRPIILICNDAYHASLRPLRTSNIAEII 621
Query: 458 VFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAE-----------------YTECDIRS 500
Q + V+ RLK I E ++ + + L E +E DIRS
Sbjct: 622 HVRQVPMENVIQRLKLILTKECIQFDADGVRRLCEASWGMSAKRDRTEKNRGVSEGDIRS 681
Query: 501 CLNTLQFLDKKKE-----------------ILNVMDIGSQVVGRKDMSRSAFDIWKEIFQ 543
L + +++ +K + ILN D S R DI +F
Sbjct: 682 ILVSAEWVARKLQAESTTTPRLTKAWLEDNILN--DSESGGGSRGLGRGGVRDITDRVFI 739
Query: 544 KRKTKRLRNSVSSSSNVSNEFDF--------------------LHSLISNRGDYD-VIFD 582
+ + SS++ S+ FD L +I G+YD D
Sbjct: 740 --EGAGFPTAPVSSNSFSDPFDRERTKTSVGVAELRRRHAAAKLREMIDASGEYDRCATD 797
Query: 583 GIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVS 642
E + D + K D L D++ I Q L Y + H L +
Sbjct: 798 CFIEYPTRTYQDDTFLSKPNAAYDWLHFHDMISSKIFSNQDWELNPYMSQSTLAFHHLFA 857
Query: 643 ------------QIQKPNLEWPKSYQRYRNAFMEKMDIFKS----WHSKI-PPYISRHLS 685
Q E P S R A E + KS + S P + S
Sbjct: 858 GNASSSNKRKFDDDQTEEEEHPFSGPRADYAAFEALKQNKSVLVGFQSTFSAPLLRLFRS 917
Query: 686 TESLVEDSISPLLHILSPPTLRPVALH------LLSAKEKNDLAQLVSA---MVSYSLTY 736
+S+ D + LL +LS P ++PV + + S +++++ A + +A M ++T+
Sbjct: 918 LDSIATDLVPNLLRMLS-PEVKPVIVRGSEQASVASVRKESERALVRAAVRVMSGLNVTF 976
Query: 737 KNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYR------SNHYVLALAVKQVLV 790
+ + +GN+ H +PPI+ + F + + + A++QVL
Sbjct: 977 EKVR-------VGNDGVHAGWAYRMEPPIDTLVGFSKTKGTILDAGSSGPVRYAIRQVLD 1029
Query: 791 HEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTNNAAVSAKLIEKSKSLPY 850
E K+ + K+ L G S +++K
Sbjct: 1030 QEYRKETLR--------------KQGETLLGLSGSSNKASKGKQ---------------- 1059
Query: 851 SRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDRFRKLSGKVSQDNDN 910
++ D + + +PK G + R G++ ++N+
Sbjct: 1060 ------------SSKDEDKENANGSRPKLGGPDAAGVK---------RDFFGRIIRNNET 1098
Query: 911 AVQKATVERDSLP--------------LLFKFNEGFTNAVKRPVRMRDFL 946
A T + P + F+EGF+NAV++P+ + + L
Sbjct: 1099 APASTTSNKARQPAHKRNSSGNDHDRKVWVTFHEGFSNAVRKPITIAELL 1148
>gi|261195410|ref|XP_002624109.1| sister chromatid cohesion factor [Ajellomyces dermatitidis
SLH14081]
gi|239587981|gb|EEQ70624.1| sister chromatid cohesion factor [Ajellomyces dermatitidis
SLH14081]
gi|327349041|gb|EGE77898.1| sister chromatid cohesion factor [Ajellomyces dermatitidis ATCC
18188]
Length = 957
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 154/598 (25%), Positives = 245/598 (40%), Gaps = 124/598 (20%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS 370
+KVLLL GPPGLGKTTLAHV A+ GY V+E+NASD+RS ++ +I D V +V S
Sbjct: 269 RKVLLLTGPPGLGKTTLAHVCARQAGYEVLEINASDERSRDVVKGRIRDAVGTENVKGVS 328
Query: 371 ------------RPKCLVIDEIDGALGDGKGA-----VEVILKMVSAERKSNTAKENVAK 413
+P C+V+DE+DG + G ++ ++ +V ++++++ N ++
Sbjct: 329 VDAGGKRIRKPGKPVCIVVDEVDGVVSGSGGGGEGGFMKALIDLVMLDQRNSS---NASE 385
Query: 414 EDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLR--QIAKVHVFIQPSVSRVVSRL 471
K +KG K LLRP+I ICND+Y P+LR LR IA++ Q S+ +VV R+
Sbjct: 386 STSTHKRGSRKG-DKFRLLRPLILICNDVYHPSLRPLRSSSIAEIIHVRQASLDKVVLRM 444
Query: 472 KHICNNESMKTSSIALTTLAEYT-----------------ECDIRSCLNTLQFLDKK--- 511
K + E + + L E + E DIR L +++ K
Sbjct: 445 KTVFEREGIPCDGDGVRRLCEASWGMTSSRDRRTNNRGVGEGDIRGVLVAGEWIAHKLRA 504
Query: 512 ---------------KEILN-VMDIGSQVVGRKDMSRSAF-DIWKEIF------------ 542
+ ILN GS G + R DI + +F
Sbjct: 505 TSVTGDIRLTRKWVEQHILNDATRDGSSARG---LGRGGTKDIVERVFLDGAGFPNAPIS 561
Query: 543 -QKRKTKRLRNSVSSSSNVSN-----EFDFLHSLISNRGDYDVIFDGIHENILQLQYHDP 596
Q + L + VS+ + L ++ G+YD Y D
Sbjct: 562 AQTFQDPFLGGNAKIPVGVSDLRKHHAINRLREMVDAAGEYDRCITECFAVYPTKTYQDD 621
Query: 597 VML-KTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPN------- 648
+L K + L D++ + Q L Y + H L S + N
Sbjct: 622 TILSKPNTAYEWLHFHDMISSKVYANQDWELNPYLSQSVVAFHHLFSSSNRQNWDGHKAQ 681
Query: 649 -----------LEWPKSYQRYRNAFMEKMDIFKSWHSKI-PPYISRHLSTESLVEDSISP 696
PK+ A + I + S PP + STES++ D I
Sbjct: 682 MDNEDNEGEHPFSGPKADFASYEAQKQNRAIITEFQSTFSPPLLRTFRSTESIIIDLIPN 741
Query: 697 LLHILSPPTLRPVAL-------HLLSAKEKNDLAQLVSA---MVSYSLTYKNTKSDPLLN 746
L +L+ P ++PV + + S ++ + A + SA M + ++NT+ +
Sbjct: 742 LTRMLA-PEIKPVIVGGSGSQRGVASVRKDTERALVKSAVRVMSGVGVKFENTRVE---- 796
Query: 747 NLGNEVS-HDVSTLSFDPPINEFITF---KGYRSNHYVLALAVKQVLVHEVEKQRIMQ 800
+E HD +PP++ F KG S+ V A++QVL E EK+ + Q
Sbjct: 797 ---SETGFHDGWIYRMEPPLDTLTMFSKLKGSGSSAPV-RYAIRQVLQQEYEKEILRQ 850
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVF 233
+W +KY F +L+ DE+T+R VL WLK WD VF
Sbjct: 212 MWTEKYRARRFKDLIGDERTHRSVLRWLKGWDPIVF 247
>gi|402082909|gb|EJT77927.1| chromosome transmission fidelity protein 18 [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 1034
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 159/363 (43%), Gaps = 93/363 (25%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LW +KY F +L+ D+ TNR+VL WLK+WD VF +S + A RR +
Sbjct: 245 LWTEKYRARKFMDLVGDDLTNRQVLRWLKRWDPVVFPQAAKSKA-----ASRRIGAKAPQ 299
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
++Q G +D P +K+L+L
Sbjct: 300 QQQ---------------------------------GQEDE---------KPHRKILMLT 317
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV--MADSRPKCL 375
GPPGLGKTTLAHV AK GY V+E+NASDDRS ++ +I + +V + +PK
Sbjct: 318 GPPGLGKTTLAHVCAKQAGYEVLEINASDDRSRDVVKGRIRTSLGTENVKTVEQHKPK-- 375
Query: 376 VIDEIDGALGD---------------------------GKGAVEVILKMVSAERKSNTAK 408
DG G G V+ ++ +V+ ++K N+A
Sbjct: 376 -----DGKPGQPPPKIARPVCVVVDEVDGVVSGSGGSGEGGFVKALIDLVTTDQK-NSAA 429
Query: 409 ENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQ--IAKVHVFIQPSVSR 466
+ + +KK +RP+I ICND+Y +LR LRQ +A++ +P++
Sbjct: 430 AGLTSDGS----RRKKKGDDFRQMRPLILICNDVYHVSLRPLRQSGLAEIIHVGKPTIDS 485
Query: 467 VVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKE--ILNVMDIGSQV 524
VV+RLK++ E + A L E + S +N + + E + VM +G V
Sbjct: 486 VVTRLKNVFEKEGIPCEKDAARKLCE-AAWGMTSGINARRGAESTVEGDLRGVMVVGEWV 544
Query: 525 VGR 527
GR
Sbjct: 545 AGR 547
>gi|221508727|gb|EEE34296.1| chromosome transmission fidelity factor, putative [Toxoplasma
gondii VEG]
Length = 1600
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 166/390 (42%), Gaps = 98/390 (25%)
Query: 199 WVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNK 258
W +KY +LLS NR VLLWL +W + ++ S + + K
Sbjct: 398 WTEKYRARKVVDLLSAPAANRSVLLWLHRWRQRLQKRGMKRDK----SGKKESENEEREK 453
Query: 259 KQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQ--KVLLL 316
++ TR++ R RN +G +D P E ++LLL
Sbjct: 454 RRKLLQATRESDAGRV----LRN-----------EGAED----------PDENLPRILLL 488
Query: 317 CGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVV-----------QMNS 365
GPPG+GKTTLAHV A+H G+ VVEVN SDDRS +T+ +++ V Q +
Sbjct: 489 GGPPGIGKTTLAHVCARHFGFDVVEVNGSDDRSRATLLPLVMNCVTGADSFFHRKKQEKA 548
Query: 366 VMADS------------------------RPKCLVIDEIDGALGDGK----GAVEVILKM 397
+ A + +P LVIDEIDGA G V+VI ++
Sbjct: 549 LRAAATHHGERRLAETEKEAEKRTCERSKKPILLVIDEIDGAAAAGGEGADSVVDVIARL 608
Query: 398 VSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVH 457
V +RK + K + RPVICICNDLYA LR LR++A++
Sbjct: 609 V--KRKDDKGKPFIK--------------------RPVICICNDLYARVLRPLREVAQIL 646
Query: 458 VFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNV 517
P + + RL I + S L L + + D+R+C+N L FL +K
Sbjct: 647 NLAAPPRNVLAERLAEILKENRLTASRQLLEQLIDIFDGDVRACINALDFLSRKSLTAGF 706
Query: 518 MDIGSQ-----VVGRKDMSRSAFDIWKEIF 542
++ + VG KD R D + +F
Sbjct: 707 RELREEDLELCAVG-KDRERHVQDFVRFVF 735
>gi|239610529|gb|EEQ87516.1| sister chromatid cohesion factor [Ajellomyces dermatitidis ER-3]
Length = 957
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 154/598 (25%), Positives = 245/598 (40%), Gaps = 124/598 (20%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS 370
+KVLLL GPPGLGKTTLAHV A+ GY V+E+NASD+RS ++ +I D V +V S
Sbjct: 269 RKVLLLTGPPGLGKTTLAHVCARQAGYEVLEINASDERSRDVVKGRIRDAVGTENVKGVS 328
Query: 371 ------------RPKCLVIDEIDGALGDGKGA-----VEVILKMVSAERKSNTAKENVAK 413
+P C+V+DE+DG + G ++ ++ +V ++++++ N ++
Sbjct: 329 VDAGGKRIRKPGKPVCIVVDEVDGVVSGSGGGGEGGFMKALIDLVMLDQRNSS---NASE 385
Query: 414 EDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLR--QIAKVHVFIQPSVSRVVSRL 471
K +KG K LLRP+I ICND+Y P+LR LR IA++ Q S+ +VV R+
Sbjct: 386 STSTHKRGSRKG-DKFRLLRPLILICNDVYHPSLRPLRSSSIAEIIHVRQASLDKVVLRM 444
Query: 472 KHICNNESMKTSSIALTTLAEYT-----------------ECDIRSCLNTLQFLDKK--- 511
K + E + + L E + E DIR L +++ K
Sbjct: 445 KTVFEREGIPCDGDGVRRLCEASWGMTSSRDRRTNNRGVGEGDIRGVLVAGEWIAHKLRA 504
Query: 512 ---------------KEILN-VMDIGSQVVGRKDMSRSAF-DIWKEIF------------ 542
+ ILN GS G + R DI + +F
Sbjct: 505 TSVTGDIRLTRKWVEQHILNDATRDGSSARG---LGRGGTKDIVERVFLDGAGFPNAPIS 561
Query: 543 -QKRKTKRLRNSVSSSSNVSN-----EFDFLHSLISNRGDYDVIFDGIHENILQLQYHDP 596
Q + L + VS+ + L ++ G+YD Y D
Sbjct: 562 VQTFQDPFLGGNAKIPVGVSDLRKHHAINRLREMVDAAGEYDRCITECFAVYPTKTYQDD 621
Query: 597 VML-KTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPN------- 648
+L K + L D++ + Q L Y + H L S + N
Sbjct: 622 TILSKPNTAYEWLHFHDMISSKVYANQDWELNPYLSQSVVAFHHLFSSSNRQNWDGHKAQ 681
Query: 649 -----------LEWPKSYQRYRNAFMEKMDIFKSWHSKI-PPYISRHLSTESLVEDSISP 696
PK+ A + I + S PP + STES++ D I
Sbjct: 682 MDNEDNEGEHPFSGPKADFASYEAQKQNRAIITEFQSTFSPPLLRTFRSTESIIIDLIPN 741
Query: 697 LLHILSPPTLRPVAL-------HLLSAKEKNDLAQLVSA---MVSYSLTYKNTKSDPLLN 746
L +L+ P ++PV + + S ++ + A + SA M + ++NT+ +
Sbjct: 742 LTRMLA-PEIKPVIVGGSGSQRGVASVRKDTERALVKSAVRVMSGVGVKFENTRVE---- 796
Query: 747 NLGNEVS-HDVSTLSFDPPINEFITF---KGYRSNHYVLALAVKQVLVHEVEKQRIMQ 800
+E HD +PP++ F KG S+ V A++QVL E EK+ + Q
Sbjct: 797 ---SETGFHDGWIYRMEPPLDTLTMFSKLKGSGSSAPV-RYAIRQVLQQEYEKEILRQ 850
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVF 233
+W +KY F +L+ DE+T+R VL WLK WD VF
Sbjct: 212 MWTEKYRARRFKDLIGDERTHRSVLRWLKGWDPIVF 247
>gi|147798248|emb|CAN76540.1| hypothetical protein VITISV_011241 [Vitis vinifera]
Length = 275
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 80/170 (47%), Positives = 106/170 (62%), Gaps = 10/170 (5%)
Query: 729 MVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLALAVKQV 788
MVS S+TYKN KSDPL +E + D +LSFDPPI +F+TFKG+ HY L +AVKQ+
Sbjct: 1 MVSXSITYKNMKSDPLXGTQLHEAASDGLSLSFDPPIADFVTFKGFSLGHYALGVAVKQL 60
Query: 789 LVHEVEKQRIMQVTIGKSEHLADGYK-ENMDLAGEEDSKTESAKTNNAAVSAK-LIEKSK 846
L+HE+EK +I+Q ++ K+ H DG + EN + EE S+ S ++AA A+ IE +K
Sbjct: 61 LMHEIEKXKILQGSMSKTMHSTDGKRXENWAMTTEEKSRAXSGNVSHAAGCAENNIETAK 120
Query: 847 SLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDR 896
S STS V + S S+ ASVK KSS D KK R S+FFDR
Sbjct: 121 S-------KASTSIVSSASGSCGSAEASVKLKSSRDVKKPPR-GSTFFDR 162
>gi|221488214|gb|EEE26428.1| C-Myc binding protein, putative [Toxoplasma gondii GT1]
Length = 1600
Score = 126 bits (316), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 161/392 (41%), Gaps = 102/392 (26%)
Query: 199 WVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIR----STSEEVLSALRRHSTI 254
W +KY +LLS NR VLLWL +W + ++ E + +
Sbjct: 398 WTEKYRARKVVDLLSAPAANRSVLLWLHRWRQRLQKRGMKRDKAGKKESENEEREKRRKL 457
Query: 255 SQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVL 314
Q +++D+ +N G + N ++L
Sbjct: 458 LQATRESDAGRVLRNEGAEDPDENL-------------------------------PRIL 486
Query: 315 LLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVV-----------QM 363
LL GPPG+GKTTLAHV A+H G+ VVEVN SDDRS +T+ +++ V Q
Sbjct: 487 LLGGPPGIGKTTLAHVCARHFGFDVVEVNGSDDRSRATLLPLVMNCVTGADSFFHRKKQE 546
Query: 364 NSVMADS------------------------RPKCLVIDEIDGALGDGK----GAVEVIL 395
++ A + +P LVIDEIDGA G V+VI
Sbjct: 547 KALRAAATHHGERRLAETEKEAEKRKCERSKKPILLVIDEIDGAAAAGGEGADSVVDVIA 606
Query: 396 KMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAK 455
++V +RK + K + RPVICICNDLYA LR LR++A+
Sbjct: 607 RLV--KRKDDKGKPFIK--------------------RPVICICNDLYARVLRPLREVAQ 644
Query: 456 VHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEIL 515
+ P + + RL I + S L L + + D+R+C+N L FL +K
Sbjct: 645 ILNLAAPPRNVLAERLAEILKENRLTASRQLLEQLIDIFDGDVRACINALDFLSRKSLTA 704
Query: 516 NVMDIGSQ-----VVGRKDMSRSAFDIWKEIF 542
++ + VG KD R D + +F
Sbjct: 705 GFRELREEDLELCAVG-KDRERHVQDFVRFVF 735
>gi|237832917|ref|XP_002365756.1| ATPase, AAA family domain-containing protein [Toxoplasma gondii
ME49]
gi|211963420|gb|EEA98615.1| ATPase, AAA family domain-containing protein [Toxoplasma gondii
ME49]
Length = 1600
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 161/392 (41%), Gaps = 102/392 (26%)
Query: 199 WVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIR----STSEEVLSALRRHSTI 254
W +KY +LLS NR VL+WL +W + ++ E + +
Sbjct: 398 WTEKYRARKVVDLLSAPAANRSVLMWLHRWRQRLQKRGMKRDKAGKKESENEEREKRRKL 457
Query: 255 SQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVL 314
Q +++D+ +N G + N ++L
Sbjct: 458 LQATRESDAGRVLRNEGAEDPDENL-------------------------------PRIL 486
Query: 315 LLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVV-----------QM 363
LL GPPG+GKTTLAHV A+H G+ VVEVN SDDRS +T+ +++ V Q
Sbjct: 487 LLGGPPGIGKTTLAHVCARHFGFDVVEVNGSDDRSRATLLPLVMNCVTGADSFFHSKKQE 546
Query: 364 NSVMADS------------------------RPKCLVIDEIDGALGDGK----GAVEVIL 395
++ A + +P LVIDEIDGA G V+VI
Sbjct: 547 KALRAAATHHGERRLAETEKEAEKRKCERSKKPILLVIDEIDGAAAAGGEGADSVVDVIA 606
Query: 396 KMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAK 455
++V +RK + K + RPVICICNDLYA LR LR++A+
Sbjct: 607 RLV--KRKDDKGKPFIK--------------------RPVICICNDLYARVLRPLREVAQ 644
Query: 456 VHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEIL 515
+ P + + RL I + S L L + + D+R+C+N L FL +K
Sbjct: 645 ILNLAAPPRNVLAERLAEILKENRLTASRQLLEQLIDIFDGDVRACINALDFLSRKSLTA 704
Query: 516 NVMDIGSQ-----VVGRKDMSRSAFDIWKEIF 542
++ + VG KD R D + +F
Sbjct: 705 GFRELREEDLELCAVG-KDRERHVQDFVRFVF 735
>gi|400596403|gb|EJP64177.1| ATPase protein [Beauveria bassiana ARSEF 2860]
Length = 975
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 155/611 (25%), Positives = 235/611 (38%), Gaps = 158/611 (25%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LW +KY SF +L D+ TNR VL WLK+WD VF RS + V
Sbjct: 212 LWTEKYRARSFMDLCGDDSTNRIVLRWLKRWDPIVFPGASRSKAGVV------------- 258
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
K G++ IQ K R K+LLL
Sbjct: 259 ----------KRPGSK---------------------IQAEEEKPHR-------KILLLT 280
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM-------ADS 370
GPPGLGKTTLAHV A+ GY V+EVNASDDRS ++N+I + +V AD
Sbjct: 281 GPPGLGKTTLAHVCARQAGYEVLEVNASDDRSRDVVKNRIRTSLGTETVKNVANRKDADG 340
Query: 371 RPKCL----------VIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
K G ++ ++ +V ++K++ + A D K
Sbjct: 341 NTKVAKPVCVVVDEVDGVVSGSGGSGEGGFIKALIDLVLLDQKNSVPR--AASYDNSRK- 397
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQ--IAKVHVFIQPSVSRVVSRLKHICNNE 478
KKKG L+RP++ ICND+Y P+LR LRQ +A++ +PS+ VV RLK + E
Sbjct: 398 -KKKG-DDFRLMRPLVLICNDVYHPSLRPLRQSNLAEIIHVGRPSIDAVVGRLKAVFEKE 455
Query: 479 SMK----------------TSSIALTTLAEYT-ECDIRSCLNTLQFLDKK---------- 511
+ TS I AE T E D+R + ++ +
Sbjct: 456 GIPCDKDASRKLCEAAWGITSGIDAKRGAESTVEGDLRGVMVVGEWAAARFRSTLLGSSH 515
Query: 512 -------KEILNVMDIGSQVVGRKDMSRSAF-DIWKEIFQKRKT-KRLRNSVSSSSNVSN 562
E + ++ S G + + R DI +FQ+ + +S S N +
Sbjct: 516 QRLTRHWIETHILGELSSGAAGARGIGRGNVKDIVTRLFQEGGGFPKQAMDLSMSKNTQH 575
Query: 563 E----------------FDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVML-KTVKCL 605
E D L ++ G+ I I +Y+D + L K +
Sbjct: 576 EQPKTELGFNEQVKKHAMDSLKQMVETSGEISYIMTEIMAEYPNREYNDDLYLSKPCQAY 635
Query: 606 DCLGNSDLMHQYIMRTQQMPL--YVYQPPLAITVHRLVSQIQK------PNLEW------ 651
D L D + Q+ L Y+ QP LA H L + ++ + W
Sbjct: 636 DWLFFHDTCQSRLFANQEWELAAYLSQPVLA--CHHLFASPKRHYNNTTGGVRWGGADAT 693
Query: 652 ------------PKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHL-STESLVEDSISPLL 698
P++ + R A ++ S++P + R S E + D + L
Sbjct: 694 EEDVGPPMPFSGPRADYQAREAEKHNRAALQAMQSQLPASLMRSFRSAEDMASDFLPYLA 753
Query: 699 HILSPPTLRPV 709
++S P ++PV
Sbjct: 754 RMIS-PDVKPV 763
>gi|148690491|gb|EDL22438.1| CTF18, chromosome transmission fidelity factor 18 homolog (S.
cerevisiae), isoform CRA_b [Mus musculus]
Length = 451
Score = 125 bits (315), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 129/500 (25%), Positives = 212/500 (42%), Gaps = 76/500 (15%)
Query: 474 ICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFL-DKKKEILNVMDIGSQVVGRKDMSR 532
I M++ AL L E T+ DIR+C+NTLQFL + + L+V + + VG KD +
Sbjct: 1 ISLQHGMRSDPGALVALCEKTDNDIRACINTLQFLYGRGRRELSVKAVQTTHVGLKDQRK 60
Query: 533 SAFDIWKEIFQKRKTKR---------------LRNSVSSSSNVSNE-FDFLHSLISNRGD 576
F +W+E+FQ +T+R L N S ++++ F + + ++ G+
Sbjct: 61 GLFSVWQEVFQLPRTQRRIVGQDLMLPAHALLLSNGDKGSLTLASQRFYHILRVTTSAGE 120
Query: 577 YDVIFDGIHENILQLQYHDPVMLKTVKC-LDCLGNSDLMHQYIMRTQQMPLYVYQPPLAI 635
++ + G+ +N L+L+ D L TV C LD L DL+ Q R Q L Y P +
Sbjct: 121 HEKVVQGLFDNFLRLRLRDS-SLSTVCCALDWLAFDDLLEQAAHRGQSFQLLCYLPFVPA 179
Query: 636 TVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSIS 695
H L + P + +P S Q + + + ++ S + P +R +T +
Sbjct: 180 AFHVLFASSHVPRITFPSSQQEAQTRMSQTRNHIQTLVSGMAP-TTRSRATPQALVLDTL 238
Query: 696 PLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHD 755
LL + P LRPV+ L SA EK L+ LV M++YSLTY ++ D
Sbjct: 239 CLLLDVLAPKLRPVSTQLYSAHEKQQLSCLVGTMLAYSLTYHQERTP------------D 286
Query: 756 VSTL-SFDPPINEFITFKGYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYK 814
L +P + E F + L KQ++ E+E +++ ++E LA
Sbjct: 287 GQYLYKLEPNVEEVCRFPELPARK-PLTYQAKQLIAREIEMEKMR-----RAEALA---- 336
Query: 815 ENMDLAGEEDSKTESAKTNNAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTAS 874
+ + + A++ EK P R ++T A+
Sbjct: 337 -----WARSGPQVDQGSSGPASLWTDSGEKGTRQPVPRNHEQRLEHIMT--------RAT 383
Query: 875 VKPKSSGDTKKSFRSSSSFFDR--FRKLS------GKVSQDNDNAVQKATVERDSLPLLF 926
V+ + D FF R RK++ +D D V R + F
Sbjct: 384 VQEQPERD----------FFGRVVIRKVAVPSREVEAPQKDADEWRMGVAVGRSE--VWF 431
Query: 927 KFNEGFTNAVKRPVRMRDFL 946
+FNEG +NAV+R + +RD L
Sbjct: 432 RFNEGVSNAVRRSLYIRDLL 451
>gi|401408781|ref|XP_003883839.1| putative ATPase, AAA family domain-containing protein [Neospora
caninum Liverpool]
gi|325118256|emb|CBZ53807.1| putative ATPase, AAA family domain-containing protein [Neospora
caninum Liverpool]
Length = 1609
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 157/356 (44%), Gaps = 77/356 (21%)
Query: 199 WVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNK 258
W +KY +LLS TNR VL+WL QW + + R ++V + + +
Sbjct: 397 WTEKYRARKVVDLLSPPATNRSVLVWLHQWQQRL---QRRGKDKKVGTRGEEGGENEETE 453
Query: 259 KQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCG 318
++ + +GN+ S+ + LE G +D + ++LL+ G
Sbjct: 454 RRR-----KLLKGNKESDAGRGSKRRLE-------GTEDDENLP---------RILLIGG 492
Query: 319 PPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVV-------------QMNS 365
PG+GKTTLAHV A+H G+ VVEVN SDDRS +T+ +++ V + S
Sbjct: 493 APGIGKTTLAHVCARHFGFDVVEVNGSDDRSRATLLPLVMNCVTGADSFFHAKKDKKATS 552
Query: 366 VMADS--------------------RPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSN 405
A S +P LVIDEIDGA E ++++++
Sbjct: 553 RGASSSGEKGRETNGAERAVCERSKKPILLVIDEIDGAAAASGEGAESVVEVIA------ 606
Query: 406 TAKENVAKEDQPEKISKKKGCK-KASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSV 464
++ KKK K K + RPVICIC DLYA LR LR+ A++ P
Sbjct: 607 -------------RLVKKKDAKGKPFIKRPVICICIDLYARVLRPLREAAQILNLNPPPR 653
Query: 465 SRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDI 520
+ + RL I + L L + E D+R+C+N L FL +K V ++
Sbjct: 654 NVLAERLAEILKENQLTADRHLLEQLIDIFEGDVRACINALDFLSRKSLTAGVREL 709
>gi|302508986|ref|XP_003016453.1| hypothetical protein ARB_04742 [Arthroderma benhamiae CBS 112371]
gi|291180023|gb|EFE35808.1| hypothetical protein ARB_04742 [Arthroderma benhamiae CBS 112371]
Length = 964
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 157/332 (47%), Gaps = 79/332 (23%)
Query: 183 QSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSE 242
++ S+P +LW +KY SF +L+ D++T+R VL WLK WD VF
Sbjct: 199 EAQGSVPGTAKPAHRLWTEKYRARSFKDLIGDDRTHRTVLRWLKAWDPIVF--------- 249
Query: 243 EVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKK 302
+++ K + D NF N ++ H+K
Sbjct: 250 ---------PGLAKPKLKKD---------------NFSND------------AEERAHRK 273
Query: 303 TRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQ 362
VLLL GPPGLGKTTLAH+ AK GY V+E+NASD+RS + + +I D V
Sbjct: 274 ----------VLLLTGPPGLGKTTLAHICAKQVGYEVLEINASDERSRTVVTGRIKDAVG 323
Query: 363 MNSVMA------------DSRPKCLVIDEIDGALGDGKGA-----VEVILKMVSAERKSN 405
+V +P C++IDE+DG +G G ++ ++ +V +++++
Sbjct: 324 TENVRGVTIVEDGKVIRKPGKPVCVIIDEVDGVVGGSGGGGEGGFMKALIDLVQLDQRNS 383
Query: 406 TAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQ--IAK-VHVFIQP 462
+ + + + K + LLRP+I ICND+Y P+LR LRQ IA+ +HV P
Sbjct: 384 SRSKTDGQGTGRKGKKKGDNFR---LLRPLILICNDVYHPSLRPLRQASIAEIIHVRRVP 440
Query: 463 SVSRVVSRLKHICNNESMKTSSIALTTLAEYT 494
+VV R+K+I E ++ + L E T
Sbjct: 441 -FDQVVQRVKNIFEKEGIQCDADGARKLCETT 471
>gi|225684695|gb|EEH22979.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 994
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 176/718 (24%), Positives = 279/718 (38%), Gaps = 194/718 (27%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
+W +KY F +L+ DE+T+R VL WLK WD+ VF L+ L+ +N
Sbjct: 263 MWTEKYRARKFKDLVGDERTHRSVLRWLKSWDAIVFPG---------LAKLK-----PKN 308
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
ND+ + H+K VL+L
Sbjct: 309 TTGNDAG--------------------------------ERTHRK----------VLVLT 326
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVI 377
GPPGLGKTTLAHV A+ GY V+E+NASD+RS ++ +I D V +V +
Sbjct: 327 GPPGLGKTTLAHVCARQAGYEVLEINASDERSRDIVKGRIRDAVGTENVKG-------IT 379
Query: 378 DEIDGALGDGKGA------------------------VEVILKMVSAERKSNTAKENVAK 413
E DG G ++ ++ +V +RK++ + ++
Sbjct: 380 VEADGKRIRKAGKPVCVVVDEVDGVVGGSGGSGEGGFMKALIDLVMLDRKNS---HSTSE 436
Query: 414 EDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLR--QIAKVHVFIQPSVSRVVSRL 471
K KKG K LLRP+I ICND+Y P+LR LR IA++ Q S+ +VV R+
Sbjct: 437 STSIHKRRYKKG-DKFLLLRPLILICNDVYHPSLRPLRTSSIAEILHVRQASLDKVVLRM 495
Query: 472 KHICNNESMKTSSIALTTLAEYT-----------------ECDIRSCLN----------- 503
K + E + + L E + E DIR L
Sbjct: 496 KTVFEREGIPCDGDGVRRLCEASWGLSSSRDRNTNNRGIGEGDIRRVLVAGEWIAQKLRA 555
Query: 504 ---------TLQFLDKKKEILNVMDIG-SQVVGR---KDMSRSAF---------DIWKEI 541
T +++++ I +V D G S+ +GR KD+ F I +
Sbjct: 556 TSPTSDIRLTRRWVEQHISIDSVRDGGSSRTLGRGGTKDIVERVFLDGAGFPDVPISAQT 615
Query: 542 FQKRKTKRLRNSVSSSSNVSN-----EFDFLHSLISNRGDYD-VIFDGIHENILQLQYHD 595
FQ + +V +SN L ++ G+YD I D Q D
Sbjct: 616 FQDPFSG---GNVKIPVGISNFRKRHAITRLREMVDAAGEYDRCITDCFTAYPTQAYQDD 672
Query: 596 PVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQK------PNL 649
++ K + L D++ + Q L Y + H L + + NL
Sbjct: 673 TILSKPNAAYEWLHFHDMISSKVYTNQDWELNPYLSQSVVAFHHLFASSNRRTGDGDKNL 732
Query: 650 --------EWPKSYQRYRNAFMEKMD----IFKSWHSKIPPYISRHL-STESLVEDSISP 696
E P S R A E + S+ P + R STES++ + I
Sbjct: 733 VNNEEDGEEHPLSGPRADFAAFEAQKHNHATITEFQSRFSPALLRTFRSTESIITELIPN 792
Query: 697 LLHILSPPTLRPVALH-------LLSAKEKNDLAQL---VSAMVSYSLTYKNTKSDPLLN 746
L +L+ P ++PV + + S +++++ A + V M + +++ +
Sbjct: 793 LTRMLA-PGIKPVIVGGSGGQRSVASVRKESERALVSLSVRVMSGIGVKFEHAR------ 845
Query: 747 NLGNEVS-HDVSTLSFDPPINEFITF---KGYRSNHYVLALAVKQVLVHEVEKQRIMQ 800
+ +E H+ +PP++ TF KG S+ V AV+QVL E EK + Q
Sbjct: 846 -IESETGFHNGWIYRMEPPLDTLTTFSNLKGVGSSAPV-RYAVRQVLQQEYEKDILRQ 901
>gi|121711537|ref|XP_001273384.1| sister chromatid cohesion factor (Chl12), putative [Aspergillus
clavatus NRRL 1]
gi|119401535|gb|EAW11958.1| sister chromatid cohesion factor (Chl12), putative [Aspergillus
clavatus NRRL 1]
Length = 936
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 200/862 (23%), Positives = 317/862 (36%), Gaps = 246/862 (28%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
+W +KY FTEL+ DE+ +R VL WLK W+ VF +S ++ Q
Sbjct: 205 MWTEKYRARKFTELIGDERIHRSVLRWLKGWEPIVFPGLAKSRPKK------------QG 252
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
K ++D + H+K VLLLC
Sbjct: 253 KNEDDG---------------------------------ERVHRK----------VLLLC 269
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA--------- 368
GPPGLGKTTLAHV AK GY ++E+NASDDRS ++ +I D + +V
Sbjct: 270 GPPGLGKTTLAHVCAKQAGYEILEINASDDRSRDVVKGRIRDALGTENVKGMNVEVGGRK 329
Query: 369 ---DSRPKCLVIDEIDGALGDG---------KGAVEVILKMVSAERKSNTAKENVAKEDQ 416
RP C+V+DE+DG + K V+++L + N+A+
Sbjct: 330 VRKAGRPVCVVVDEVDGVVSGSGSGGEGGFMKALVDLVL----------LDQRNMARSSD 379
Query: 417 PEKIS--KKKGCKKASLLRPVICICNDLYAPALRSLR--QIAKVHVFIQPSVSRVVSRLK 472
P S K+KG K LRP+I +CND+Y P+LR LR IA++ Q VVSRLK
Sbjct: 380 PNAKSGHKRKG-DKFRFLRPLILVCNDVYHPSLRPLRTSSIAEIIHVRQAPFENVVSRLK 438
Query: 473 HICNNESMKTSSIALTTLAEYT-----------------ECDIRSCLNTLQFLDKK---- 511
+I E + + + + L E + E DIRS L +++ K
Sbjct: 439 NILTLEGIPSDNDGVRRLCEASWGLSRKKSGGMKSSGTAEGDIRSVLVAAEWVAHKLRNE 498
Query: 512 -------------KEILNVMDIGSQVVGRKDMSRSAF-DIWKEIFQKRKTKRLRNSVSSS 557
K +L+ GS G +SR DI +F + ++ +S
Sbjct: 499 SLSSLKLTRSWFEKRVLSGPAEGSFFKG---LSRGGVRDIVDRVFL--EGGGFPDAPVNS 553
Query: 558 SNVSNEFD--------------------FLHSLISNRGDYDVIFDGIHENILQLQYHDPV 597
+ + +D L +I GD D Y D
Sbjct: 554 GSFQDPYDNSDRNVPLGVADLRKRHAINKLREMIDASGDQDRCASECFATYPLQSYQDDT 613
Query: 598 ML-KTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLE------ 650
L K D L D + + +Q+ L Y I H L S + +
Sbjct: 614 FLSKPNAAYDWLYFHDTISSKVYTSQEWELTPYLSQSVIAFHHLFSSVGGKRISKNHDED 673
Query: 651 -----WPKSYQRYRNAFMEKMD----IFKSWHSKI-PPYISRHLSTESLVEDSISPLLHI 700
P S R A E I + S P + ST+SL+ D + L+ +
Sbjct: 674 DEEEEHPFSGSRADFAAFEAQKQNRAILNGFQSSFSAPLLRLFRSTDSLITDLVPNLMRM 733
Query: 701 LSPPTLRPVALH-------LLSAKEKNDLAQLVSA---MVSYSLTYKNTKSDPLLNNLGN 750
LS P ++PV + + S +++++ A + +A M +T++ + +
Sbjct: 734 LS-PDVKPVVVRGSGEQRSVASVRKESERALVQAAVRVMAGLGVTFEKVRVEG------E 786
Query: 751 EVSHDVSTLSFDPPINEFITFKGYR------SNHYVLALAVKQVLVHEVEKQRIMQVTIG 804
H +PP++ + F + + + AV+QVL E K + T
Sbjct: 787 GGGHGGFAYRMEPPLDSLVAFSKVKGTLADTGSSMPVRYAVRQVLDQEYRK----ETTRK 842
Query: 805 KSEHLADGYKENMDLAGEEDSKTESAKTNNAAVSAKLIEKSKSLPYSRQCNPSTSTVLTT 864
SE L + + D K A NA +A L K P ++
Sbjct: 843 HSEALT---------SSKADKKNGKADGGNAGKNATL----KDAPGIKR----------- 878
Query: 865 LDSSRSSTASVKPKSSGDTKKSFRSSSSFFDRFRKLSGKVSQDNDNAVQKATVERDSLPL 924
FF R + SQ +D + + +
Sbjct: 879 ---------------------------DFFGRIIQKPEPQSQTSDGIPMQNETSKAGRKV 911
Query: 925 LFKFNEGFTNAVKRPVRMRDFL 946
+++GF+NAV++P+ + + +
Sbjct: 912 WITYHDGFSNAVRKPISLSELM 933
>gi|302661469|ref|XP_003022402.1| hypothetical protein TRV_03466 [Trichophyton verrucosum HKI 0517]
gi|291186345|gb|EFE41784.1| hypothetical protein TRV_03466 [Trichophyton verrucosum HKI 0517]
Length = 994
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/336 (30%), Positives = 156/336 (46%), Gaps = 81/336 (24%)
Query: 179 SSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIR 238
S E Q KP +LW +KY SF +L+ D++T+R VL WLK WD VF
Sbjct: 197 SVEAQGSAPGTAKPA--HRLWTEKYRARSFKDLIGDDRTHRTVLRWLKAWDPIVF----- 249
Query: 239 STSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDS 298
+++ K + D NF N ++
Sbjct: 250 -------------PGLAKPKLKKD---------------NFSND------------AEER 269
Query: 299 WHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKIL 358
H+K VLLL GPPGLGKTTLAH+ AK GY V+E+NASD+RS + + +I
Sbjct: 270 AHRK----------VLLLTGPPGLGKTTLAHICAKQVGYEVLEINASDERSRTVVTGRIK 319
Query: 359 DVVQMNSVMA------------DSRPKCLVIDEIDGALGDGKGA-----VEVILKMVSAE 401
D V +V +P C++IDE+DG +G G ++ ++ +V +
Sbjct: 320 DAVGTENVRGVTIVEDGKVIRKPGKPVCVIIDEVDGVVGGSGGGGEGGFMKALIDLVQLD 379
Query: 402 RKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQ--IAK-VHV 458
+++++ + + + K + LLRP+I ICND+Y P+LR LRQ IA+ +HV
Sbjct: 380 QRNSSRSKTDGQGTGRKGKKKGDNFR---LLRPLILICNDVYHPSLRPLRQASIAEIIHV 436
Query: 459 FIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYT 494
P +VV R+K I E ++ + L E T
Sbjct: 437 RRVP-FDQVVQRVKSIFEKEGIQCDADGARKLCETT 471
>gi|310795231|gb|EFQ30692.1| ATPase [Glomerella graminicola M1.001]
Length = 967
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 128/242 (52%), Gaps = 31/242 (12%)
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV-- 366
P +K+L+L GPPGLGKTTLAHV A+ GY V+EVNASDDRS ++N+I + SV
Sbjct: 280 PHKKILMLTGPPGLGKTTLAHVCARQAGYDVMEVNASDDRSRDVVKNRIRTSLGTESVKT 339
Query: 367 ------------MADSRPKCLVIDEIDGALGDGKGA-----VEVILKMVSAERKSNTAKE 409
++P C+++DE+DG +G + V+ ++ +V ++K++
Sbjct: 340 VENIKTKDGETQQKVAKPACVIVDEVDGVVGGSGASGEGGFVKALIDLVLLDQKNSAGAS 399
Query: 410 NVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQ--IAKVHVFIQPSVSRV 467
N + KKK L+RP+I ICND+Y P+LR LRQ +A++ +P + V
Sbjct: 400 NASGR-------KKKKGDDFRLMRPLILICNDVYHPSLRPLRQSGMAEIIHVGKPGIDAV 452
Query: 468 VSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKE--ILNVMDIGSQVV 525
V+RLK + + E + A + E + S ++ + + E + VM +G V
Sbjct: 453 VTRLKTVFDKEGIPCEKDAARKICE-AAWGMTSGIDAKRGAESGTEGDLRGVMVVGEWVA 511
Query: 526 GR 527
GR
Sbjct: 512 GR 513
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 5/49 (10%)
Query: 190 EKPVVHEQ-----LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVF 233
E+PV +Q LW +KY +F +L D+ TNR VL WLK+WD VF
Sbjct: 208 EQPVAGKQHKKTLLWTEKYRARNFLDLCGDDGTNRMVLRWLKRWDPIVF 256
>gi|391868283|gb|EIT77501.1| DNA replication checkpoint protein CHL12/CTF18 [Aspergillus oryzae
3.042]
Length = 1056
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 145/596 (24%), Positives = 246/596 (41%), Gaps = 115/596 (19%)
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA 368
P +KV+LLCGPPGLGKTTLAHV AK GY V+E+NASDDRS ++ +I D + +V
Sbjct: 377 PHRKVMLLCGPPGLGKTTLAHVCAKQAGYEVLEINASDDRSKDVVKGRIRDALGTENVKG 436
Query: 369 ------------DSRPKCLVIDEIDGALGDGKGA-----VEVILKMVSAERKSNTAKENV 411
+RP C+V+DE+DG +G ++ ++ +V ++K N
Sbjct: 437 MNVEVGEKKVRKAARPVCVVVDEVDGVVGGSGSGGEGGFMKALIDLVLLDQK------NA 490
Query: 412 AKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLR--QIAKVHVFIQPSVSRVVS 469
A+ + + +K+ LRP+I +CND+Y P+LR LR +A++ Q + VVS
Sbjct: 491 ARSSEQKTAGRKRKGDNFRFLRPLILVCNDVYHPSLRPLRASSVAEMIHVRQAPLENVVS 550
Query: 470 RLKHICNNESMKTSSIALTTLAEYT-----------------ECDIRSCLNTLQFLDKKK 512
R++ I N E + + + L E + E DIRS L +++ K
Sbjct: 551 RMRGIFNLEGIPADNDGVRRLCEASWGVARRKQANFKNSGTAEGDIRSVLVAAEWVAHKL 610
Query: 513 EILNV-----------MDIGSQVVGR----KDMSRSAF-DIWKEIFQKRK--------TK 548
+ +V ++ S+ G K ++R DI + +F + +
Sbjct: 611 KYESVESMRLTRRWLEQNVLSEAAGGNSFFKGLNRGGVRDIVERVFTEGAGFADVPINAE 670
Query: 549 RLRNSVSSSSNV---------SNEFDFLHSLISNRGDYD-VIFDGIHENILQLQYHDPVM 598
R+ ++ + L ++ GDYD + + LQ D +
Sbjct: 671 SFRDPFDDNAKTPVGVADLKKRYAINRLREMVDASGDYDRCVTECFTSYPLQTYQDDTFL 730
Query: 599 LKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQI------QKPNLE-- 650
K D L D + + Q L Y + H L + +P+ E
Sbjct: 731 SKPNNAYDWLHFHDTISSKVFSNQDWELTPYLSQSVVAFHHLFASAYGKRTRNEPDDEGE 790
Query: 651 ------WPKSYQRYRNAFMEKMDIFKSWHSKI-PPYISRHLSTESLVEDSISPLLHILSP 703
P++ A + I + S + P + +T+ LV D + L+ +LS
Sbjct: 791 EEHPFSGPRAEFAANEALKQNRAIVNGFQSSLTAPMLRLFRATDCLVTDLVPNLMRMLS- 849
Query: 704 PTLRPVALH----------LLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVS 753
P ++PV + + E+ + V M +T++ + + G +
Sbjct: 850 PDVKPVVVRGSGEQRSTASVRKESERALVQAAVRVMTGLGVTFEKVRVE------GEGGA 903
Query: 754 HDVSTLSFDPPINEFITF---KGYRSNHYVLA----LAVKQVLVHEVEKQRIMQVT 802
H +PP++ +TF KG+ S A AV+QVL E K+ + + T
Sbjct: 904 HGGWAYRMEPPLDSLVTFSKTKGHSSTGTTGAAPVRYAVRQVLDQEYRKETVRKQT 959
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRS 239
+W +KY FTEL+ DE+T+R V+ WLK W+S V+ + RS
Sbjct: 324 MWTEKYRARRFTELIGDERTHRSVMRWLKGWESIVYPNLARS 365
>gi|68074549|ref|XP_679190.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56499871|emb|CAI00274.1| hypothetical protein PB000834.03.0 [Plasmodium berghei]
Length = 493
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 108/194 (55%), Gaps = 25/194 (12%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSR 371
K+LLL G G GKTTLA+V A H ++V+E+N SDDR+ T+ I +V NS+ S+
Sbjct: 324 KILLLGGSAGKGKTTLAYVIANHFKFNVIEINGSDDRNKETLIPFIESIVCNNSI--GSK 381
Query: 372 PKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASL 431
P +IDEIDG L +E I+ ++ + K N + +
Sbjct: 382 PNICIIDEIDG-LSSTYQNIEAIMNFLNKKDKKNMS----------------------II 418
Query: 432 LRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLA 491
RP+ICICND+Y +L+ LR+I KV + ++ + R+ +IC+ E++K S+ A+ L
Sbjct: 419 KRPIICICNDIYHKSLKELRKICKVVLVENINIQMLKGRINYICDKENIKISNEAINKLI 478
Query: 492 EYTECDIRSCLNTL 505
+ + DIR+ LNT+
Sbjct: 479 DIYKSDIRAILNTI 492
Score = 48.1 bits (113), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 179 SSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCV 232
S E +K + +V+KY F+ELL+DE NRE +LW+KQW+ +
Sbjct: 244 SKENDESNIFSQKMLTENVNFVEKYRGKYFSELLTDEAINREAILWIKQWNDLI 297
>gi|317139393|ref|XP_001817482.2| chromosome transmission fidelity protein 18 [Aspergillus oryzae
RIB40]
Length = 1049
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 145/596 (24%), Positives = 245/596 (41%), Gaps = 115/596 (19%)
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA 368
P +KV+LLCGPPGLGKTTLAHV AK GY V+E+NASDDRS ++ +I D + +V
Sbjct: 370 PHRKVMLLCGPPGLGKTTLAHVCAKQAGYEVLEINASDDRSKDVVKGRIRDALGTENVKG 429
Query: 369 ------------DSRPKCLVIDEIDGALGDGKGA-----VEVILKMVSAERKSNTAKENV 411
+RP C+V+DE+DG +G ++ ++ +V ++K N
Sbjct: 430 MNVEVGEKKVRKAARPVCVVVDEVDGVVGGSGSGGEGGFMKALIDLVLLDQK------NA 483
Query: 412 AKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLR--QIAKVHVFIQPSVSRVVS 469
A+ + +K+ LRP+I +CND+Y P+LR LR +A++ Q + VVS
Sbjct: 484 ARSSEQNTAGRKRKGDNFRFLRPLILVCNDVYHPSLRPLRASSVAEMIHVRQAPLENVVS 543
Query: 470 RLKHICNNESMKTSSIALTTLAEYT-----------------ECDIRSCLNTLQFLDKKK 512
R++ I N E + + + L E + E DIRS L +++ K
Sbjct: 544 RMRGIFNLEGIPADNDGVRRLCEASWGVARRKQANFKNSGTAEGDIRSVLVAAEWVAHKL 603
Query: 513 EILNV-----------MDIGSQVVGR----KDMSRSAF-DIWKEIFQKR--------KTK 548
+ +V ++ S+ G K ++R DI + +F + +
Sbjct: 604 KYESVESMRLTRRWLEQNVLSEAAGGNSFFKGLNRGGVRDIVERVFTEGAGFADVPINAE 663
Query: 549 RLRNSVSSSSNV---------SNEFDFLHSLISNRGDYD-VIFDGIHENILQLQYHDPVM 598
R+ ++ + L ++ GDYD + + LQ D +
Sbjct: 664 SFRDPFDDNAKTPVGVADLKKRYAINRLREMVDASGDYDRCVTECFTSYPLQTYQDDTFL 723
Query: 599 LKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQI------QKPNLE-- 650
K D L D + + Q L Y + H L + +P+ E
Sbjct: 724 SKPNNAYDWLHFHDTISSKVFSNQDWELTPYLSQSVVAFHHLFASAYGKRTRNEPDDEGE 783
Query: 651 ------WPKSYQRYRNAFMEKMDIFKSWHSKI-PPYISRHLSTESLVEDSISPLLHILSP 703
P++ A + I + S + P + +T+ LV D + L+ +LS
Sbjct: 784 EEHPFSGPRAEFAANEALKQNRAIVNGFQSSLTAPMLRLFRATDCLVTDLVPNLMRMLS- 842
Query: 704 PTLRPVALH----------LLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVS 753
P ++PV + + E+ + V M +T++ + + G +
Sbjct: 843 PDVKPVVVRGSGEQRSTASVRKESERALVQAAVRVMTGLGVTFEKVRVE------GEGGA 896
Query: 754 HDVSTLSFDPPINEFITF---KGYRSNHYVLA----LAVKQVLVHEVEKQRIMQVT 802
H +PP++ +TF KG+ S A AV+QVL E K+ + + T
Sbjct: 897 HGGWAYRMEPPLDSLVTFSKTKGHSSTGTTGAAPVRYAVRQVLDQEYRKETVRKQT 952
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRS 239
+W +KY FTEL+ DE+T+R V+ WLK W+S V+ + RS
Sbjct: 317 MWTEKYRARKFTELIGDERTHRSVMRWLKGWESIVYPNLARS 358
>gi|238482649|ref|XP_002372563.1| sister chromatid cohesion factor (Chl12), putative [Aspergillus
flavus NRRL3357]
gi|220700613|gb|EED56951.1| sister chromatid cohesion factor (Chl12), putative [Aspergillus
flavus NRRL3357]
Length = 948
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 146/596 (24%), Positives = 250/596 (41%), Gaps = 115/596 (19%)
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA 368
P +KV+LLCGPPGLGKTTLAHV AK GY V+E+NASDDRS ++ +I D + +V
Sbjct: 269 PHRKVMLLCGPPGLGKTTLAHVCAKQAGYEVLEINASDDRSKDVVKGRIRDALGTENVKG 328
Query: 369 ------------DSRPKCLVIDEIDGALGDGKGA-----VEVILKMVSAERKSNTAKENV 411
+RP C+V+DE+DG +G ++ ++ +V ++K N
Sbjct: 329 MNVEVGEKKVRKAARPVCVVVDEVDGVVGGSGSGGEGGFMKALIDLVLLDQK------NA 382
Query: 412 AKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLR--QIAKVHVFIQPSVSRVVS 469
A+ + +K+ LRP+I +CND+Y P+LR LR +A++ Q + VVS
Sbjct: 383 ARSSEQNTAGRKRKGDNFRFLRPLILVCNDVYHPSLRPLRASSVAEMIHVRQAPLENVVS 442
Query: 470 RLKHICNNESMKTSSIALTTLAEYT-----------------ECDIRSCLNTLQFLDKKK 512
R++ I N E + + + L E + E DIRS L +++ K
Sbjct: 443 RMRGIFNLEGIPADNDGVRRLCEASWGVARRKQANFKNSGTAEGDIRSVLVAAEWVAHKL 502
Query: 513 EILNV-----------MDIGSQVVGR----KDMSRSAF-DIWKEIFQKRK--------TK 548
+ +V ++ S+ G K ++R DI + +F + +
Sbjct: 503 KYESVESMRLTRRWLEQNVLSEAAGGNSFFKGLNRGGVRDIVERVFTEGAGFADVPINAE 562
Query: 549 RLRNSVSSSSNV---------SNEFDFLHSLISNRGDYD-VIFDGIHENILQLQYHDPVM 598
R+ ++ + L ++ GDYD + + LQ D +
Sbjct: 563 SFRDPFDDNAKTPVGVADLKKRYAINRLREMVDASGDYDRCVTECFTSYPLQTYQDDTFL 622
Query: 599 LKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQI------QKPNLE-- 650
K D L D + + Q L Y + H L + +P+ E
Sbjct: 623 SKPNNAYDWLHFHDTISSKVFSNQDWELTPYLSQSVVAFHHLFASAYGKRTRNEPDDEGE 682
Query: 651 ------WPKSYQRYRNAFMEKMDIFKSWHSKI-PPYISRHLSTESLVEDSISPLLHILSP 703
P++ A + I + S + P + +T+ LV D + L+ +LS
Sbjct: 683 EEHPFSGPRAEFAANEALKQNRAIVNGFQSSLTAPMLRLFRATDCLVTDLVPNLMRMLS- 741
Query: 704 PTLRPVALH-------LLSAKEKNDLAQLVSA---MVSYSLTYKNTKSDPLLNNLGNEVS 753
P ++PV + S +++++ A + +A M +T++ + + G +
Sbjct: 742 PDVKPVVVRGSGEQRSTASVRKESERALVQAAVRVMTGLGVTFEKVRVE------GEGGA 795
Query: 754 HDVSTLSFDPPINEFITF---KGYRSNHYVLA----LAVKQVLVHEVEKQRIMQVT 802
H +PP++ +TF KG+ S A AV+QVL E K+ + + T
Sbjct: 796 HGGWAYRMEPPLDSLVTFSKTKGHSSTGTTGAAPVRYAVRQVLDQEYRKETVRKQT 851
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRS 239
+W +KY FTEL+ DE+T+R V+ WLK W+S V+ + RS
Sbjct: 216 MWTEKYRARRFTELIGDERTHRSVMRWLKGWESIVYPNLARS 257
>gi|83765337|dbj|BAE55480.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 896
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 146/596 (24%), Positives = 250/596 (41%), Gaps = 115/596 (19%)
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA 368
P +KV+LLCGPPGLGKTTLAHV AK GY V+E+NASDDRS ++ +I D + +V
Sbjct: 217 PHRKVMLLCGPPGLGKTTLAHVCAKQAGYEVLEINASDDRSKDVVKGRIRDALGTENVKG 276
Query: 369 ------------DSRPKCLVIDEIDGALGDGKGA-----VEVILKMVSAERKSNTAKENV 411
+RP C+V+DE+DG +G ++ ++ +V ++K N
Sbjct: 277 MNVEVGEKKVRKAARPVCVVVDEVDGVVGGSGSGGEGGFMKALIDLVLLDQK------NA 330
Query: 412 AKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLR--QIAKVHVFIQPSVSRVVS 469
A+ + +K+ LRP+I +CND+Y P+LR LR +A++ Q + VVS
Sbjct: 331 ARSSEQNTAGRKRKGDNFRFLRPLILVCNDVYHPSLRPLRASSVAEMIHVRQAPLENVVS 390
Query: 470 RLKHICNNESMKTSSIALTTLAEYT-----------------ECDIRSCLNTLQFLDKKK 512
R++ I N E + + + L E + E DIRS L +++ K
Sbjct: 391 RMRGIFNLEGIPADNDGVRRLCEASWGVARRKQANFKNSGTAEGDIRSVLVAAEWVAHKL 450
Query: 513 EILNV-----------MDIGSQVVGR----KDMSRSAF-DIWKEIFQKR--------KTK 548
+ +V ++ S+ G K ++R DI + +F + +
Sbjct: 451 KYESVESMRLTRRWLEQNVLSEAAGGNSFFKGLNRGGVRDIVERVFTEGAGFADVPINAE 510
Query: 549 RLRNSVSSSSNV---------SNEFDFLHSLISNRGDYD-VIFDGIHENILQLQYHDPVM 598
R+ ++ + L ++ GDYD + + LQ D +
Sbjct: 511 SFRDPFDDNAKTPVGVADLKKRYAINRLREMVDASGDYDRCVTECFTSYPLQTYQDDTFL 570
Query: 599 LKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQI------QKPNLE-- 650
K D L D + + Q L Y + H L + +P+ E
Sbjct: 571 SKPNNAYDWLHFHDTISSKVFSNQDWELTPYLSQSVVAFHHLFASAYGKRTRNEPDDEGE 630
Query: 651 ------WPKSYQRYRNAFMEKMDIFKSWHSKI-PPYISRHLSTESLVEDSISPLLHILSP 703
P++ A + I + S + P + +T+ LV D + L+ +LS
Sbjct: 631 EEHPFSGPRAEFAANEALKQNRAIVNGFQSSLTAPMLRLFRATDCLVTDLVPNLMRMLS- 689
Query: 704 PTLRPVALH-------LLSAKEKNDLAQLVSA---MVSYSLTYKNTKSDPLLNNLGNEVS 753
P ++PV + S +++++ A + +A M +T++ + + G +
Sbjct: 690 PDVKPVVVRGSGEQRSTASVRKESERALVQAAVRVMTGLGVTFEKVRVE------GEGGA 743
Query: 754 HDVSTLSFDPPINEFITF---KGYRSNHYVLA----LAVKQVLVHEVEKQRIMQVT 802
H +PP++ +TF KG+ S A AV+QVL E K+ + + T
Sbjct: 744 HGGWAYRMEPPLDSLVTFSKTKGHSSTGTTGAAPVRYAVRQVLDQEYRKETVRKQT 799
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRS 239
+W +KY FTEL+ DE+T+R V+ WLK W+S V+ + RS
Sbjct: 164 MWTEKYRARKFTELIGDERTHRSVMRWLKGWESIVYPNLARS 205
>gi|297741989|emb|CBI33776.3| unnamed protein product [Vitis vinifera]
Length = 92
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/81 (69%), Positives = 68/81 (83%)
Query: 631 PPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLV 690
P AI++H L++Q+QKP +EWPKS+ RYR FMEK DI +SWH+KI PYISRHLS +S V
Sbjct: 3 PLTAISLHHLIAQVQKPIIEWPKSFMRYRMTFMEKRDILRSWHNKIAPYISRHLSIKSFV 62
Query: 691 EDSISPLLHILSPPTLRPVAL 711
EDS+SPLLHILSPPTLRP +L
Sbjct: 63 EDSVSPLLHILSPPTLRPDSL 83
>gi|241957984|ref|XP_002421711.1| chromosome transmission fidelity protein, putative [Candida
dubliniensis CD36]
gi|223645056|emb|CAX39650.1| chromosome transmission fidelity protein, putative [Candida
dubliniensis CD36]
Length = 851
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 165/703 (23%), Positives = 295/703 (41%), Gaps = 148/703 (21%)
Query: 307 GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDD----------------RSS 350
G P +K+LL+ GP G+GKTT++H+ AKH GY V E+NA++ ++
Sbjct: 234 GRPYKKILLIHGPTGIGKTTISHILAKHMGYTVQELNAANSMDTLPQASGGGSSAYTNAA 293
Query: 351 STIENKILDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKEN 410
S ++ KI++ + NS+ + +P CL+IDEID +L + V+V+ +V ++ ++ K
Sbjct: 294 SALKLKIVNALTSNSIHSQGKPTCLIIDEID-SLANINDVVKVLNDLVQSDHRALNKK-- 350
Query: 411 VAKEDQPEKISKKKGCKKASLL--RPVICICNDLYA-PA-------LRSLRQIAKVHVFI 460
K E I KK KK + RP+ICI ND+Y+ P+ + LR I+++ F
Sbjct: 351 -LKRSSMEDIEAKKKSKKKDIFLNRPIICIANDIYSQPSNRFGPNPMEKLRPISEIIQFR 409
Query: 461 QPSVSRVVS--------------RLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQ 506
+P+ SR S L I E+M + + E E DIR+C+N +Q
Sbjct: 410 KPTSSRTTSGAKTGGNAIKSVKDYLMEINKQENMGLDHQEIGEIVEICEGDIRACINHMQ 469
Query: 507 FLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFD- 565
F + + + + ++ R+ S F + ++F++ +S N++ FD
Sbjct: 470 FNSRSVDTIERRIAKTPLIDRQ---LSWFAMTDQLFKRDP------QLSKEENLARLFDG 520
Query: 566 FLH----SLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRT 621
F++ +L SN G +D + G+ + +Y D V ++ + SD + T
Sbjct: 521 FMNGEGRALASNSGTFDRVLKGVFD-----KYLDIVHIQDDSLVKPCELSDWISYQSQFT 575
Query: 622 QQMPLYVYQPPLAITVHRLVSQIQ-----------KPNLEWPKSYQRYRNAFMEKMDIFK 670
+ Y P + + L S I+ NL++ S N +I +
Sbjct: 576 RSNETNEYSPLILLKASSLFSDIRVQPGSQTLIPNAKNLDFEHSQLLKSNK-----NIVR 630
Query: 671 SWHSKIPPYIS-----RHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQL 725
S +++P + H + SLV + L ILSP V LSA EK L ++
Sbjct: 631 SMENRLPVQVRVALGINHENAASLV---LPCLAKILSPHMSAKVKSD-LSAVEKRCLERI 686
Query: 726 VSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLALAV 785
+ L+ + +K ++ +S+L +P ++ + Y ++ A V
Sbjct: 687 AGLVKELDLSLEYSK----------DLETGLSSLKLNPDLDSLTIYDNYLTS-IPAASVV 735
Query: 786 KQVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTNNAAVSAKLIEKS 845
KQ ++ +Q + + + E D S K+ ++ + E
Sbjct: 736 KQT---QLRRQSLFPL-----------------ITAELDRLNVSKKSVKRSLEDNIKE-- 773
Query: 846 KSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDRFRKLSGKVS 905
S+ + KPK+ T +F F R+ +++ K +
Sbjct: 774 ---------------------SNNGDKITKKPKNLATTSLNF-----FKGRYEEINSKTN 807
Query: 906 QDN-DNAVQKATVERDSLPLLFKFNEGFTNAVKRPVRMRDFLL 947
DN D E + + K+NEGF+NAV++ + D L
Sbjct: 808 MDNIDEGSSDGEKEFKTSRIWVKYNEGFSNAVRKNIGWNDLWL 850
>gi|367033349|ref|XP_003665957.1| hypothetical protein MYCTH_2310240 [Myceliophthora thermophila ATCC
42464]
gi|347013229|gb|AEO60712.1| hypothetical protein MYCTH_2310240 [Myceliophthora thermophila ATCC
42464]
Length = 1049
Score = 123 bits (308), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 114/372 (30%), Positives = 175/372 (47%), Gaps = 81/372 (21%)
Query: 183 QSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSE 242
++ +S P++P LW +KY +F +L D+ TNR+VL WLK+WD VF +
Sbjct: 244 EAQQSNPKRPK-RTMLWTEKYRARTFMDLCGDDLTNRQVLRWLKRWDPIVFPH----AAN 298
Query: 243 EVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKK 302
+ A+RRH G Q H
Sbjct: 299 KNKPAVRRH------------------------------------------GAQHHQH-- 314
Query: 303 TRSTGPPEQ-----KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKI 357
+ PPE+ K+L+L GPPGLGKTTLAHV A+ GY V+E+NASD+RS ++ +I
Sbjct: 315 --AGQPPEEEKPHRKILVLHGPPGLGKTTLAHVCARQAGYEVMEINASDERSRDVVKGRI 372
Query: 358 LDVVQMNSV-------------MADSRPKCLVIDEIDGALGDGKGA-----VEVILKMVS 399
+ SV +RP C+V+DE+DG +G + V+ ++ +V
Sbjct: 373 RTSLATESVKTVEHKKPDPGKQQKVARPVCVVVDEVDGVVGGSGASGDGGFVKALIDLVM 432
Query: 400 AERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQ--IAKVH 457
++K+++A + A P + +KK +RP+I ICND+Y P+LR LRQ +A++
Sbjct: 433 LDQKNSSASGSAAAAPGPGR--RKKKSDDFRQMRPLILICNDVYHPSLRPLRQSGLAEIV 490
Query: 458 VFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKE--IL 515
+P+V VV RLK I E + A L E + S ++ + + E +
Sbjct: 491 HVGKPTVEAVVGRLKTIFEKEGIPCEKDAARKLCE-AAWGMTSGIDARRGAESNAEGDLR 549
Query: 516 NVMDIGSQVVGR 527
VM +G V GR
Sbjct: 550 GVMVVGEWVAGR 561
>gi|327303788|ref|XP_003236586.1| sister chromatid cohesion factor [Trichophyton rubrum CBS 118892]
gi|326461928|gb|EGD87381.1| sister chromatid cohesion factor [Trichophyton rubrum CBS 118892]
Length = 972
Score = 123 bits (308), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 99/318 (31%), Positives = 152/318 (47%), Gaps = 79/318 (24%)
Query: 197 QLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQ 256
+LW +KY SF +L+ D++T+R VL WLK WD VF +++
Sbjct: 220 RLWTEKYRARSFKDLIGDDRTHRTVLRWLKAWDPIVF------------------PGLAK 261
Query: 257 NKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLL 316
K + DS SN+ E + H+K VLLL
Sbjct: 262 PKLKKDSF-----------------SNDAE----------ERAHRK----------VLLL 284
Query: 317 CGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-------- 368
GPPGLGKTTLAH+ AK GY ++E+NASD+RS + + +I D V +V
Sbjct: 285 TGPPGLGKTTLAHICAKQVGYEILEINASDERSRTVVTGRIKDAVGTENVRGVTIVEDGK 344
Query: 369 ----DSRPKCLVIDEIDGALGDGKGA-----VEVILKMVSAERKSNTAKENVAKEDQPEK 419
+P C++IDE+DG +G G ++ ++ +V ++++++ + + +
Sbjct: 345 VIRKPGKPVCVIIDEVDGVVGGSGGGGEGGFMKALIDLVQLDQRNSSRSKTDGQGTGRKG 404
Query: 420 ISKKKGCKKASLLRPVICICNDLYAPALRSLRQ--IAK-VHVFIQPSVSRVVSRLKHICN 476
K + LLRP+I ICND+Y P+LR LRQ IA+ +HV P +VV R+K I
Sbjct: 405 KKKGDNFR---LLRPLILICNDVYHPSLRPLRQASIAEIIHVRRVP-FDQVVQRVKSIFE 460
Query: 477 NESMKTSSIALTTLAEYT 494
E ++ + L E T
Sbjct: 461 KEGIQCDADGARKLCETT 478
>gi|156094975|ref|XP_001613523.1| replication factor c [Plasmodium vivax Sal-1]
gi|148802397|gb|EDL43796.1| replication factor c, putative [Plasmodium vivax]
Length = 1095
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 153/326 (46%), Gaps = 79/326 (24%)
Query: 183 QSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSE 242
Q+ ++L K V+ +V+KY F+ELL+DE NREVLLW+KQW
Sbjct: 249 QAGKNLKPKKCVN---FVEKYRAKYFSELLTDEAINREVLLWMKQW-------------- 291
Query: 243 EVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKK 302
S+ + +S T + GN RN +NS
Sbjct: 292 ------------SERIGKGPTSLTS-------TQGNERNEEEEAKKNSEF---------- 322
Query: 303 TRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQ 362
Q++LLL G G GKTTLA+V A H ++V+E+N SDDR+ T+ + +V
Sbjct: 323 --------QRILLLGGSAGKGKTTLAYVVANHFKFNVIEINGSDDRNKETLIPLVESIVC 374
Query: 363 MNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISK 422
NS+ S+P +IDEIDG L + +E ++K ++K
Sbjct: 375 NNSI--GSKPNICIIDEIDG-LTSTQQNIEAVMKF----------------------LTK 409
Query: 423 KKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKT 482
K ++ + RP+ICICND+Y +L+ LR+I+KV V + + R+ IC E +
Sbjct: 410 KDRRNRSIIRRPIICICNDIYHKSLKELRKISKVVVVESVNHEMLKGRINFICEREGISI 469
Query: 483 SSIALTTLAEYTECDIRSCLNTLQFL 508
+ + L + + DIR+ LNT+ FL
Sbjct: 470 GNETVNKLVDICKGDIRAVLNTICFL 495
>gi|390371027|dbj|GAB64908.1| replication factor C subunit 1 [Plasmodium cynomolgi strain B]
Length = 876
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 141/353 (39%), Gaps = 103/353 (29%)
Query: 197 QLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDS-CVFGSEIRSTSEEVLSALRRHSTIS 255
QLWV+KY P + EL+ + Q ++ WL WD C+ G
Sbjct: 388 QLWVEKYRPKNLNELVGNNQNVLKLKNWLASWDDVCIKGL-------------------- 427
Query: 256 QNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLL 315
KKQ +F RG YEN N++ L
Sbjct: 428 --KKQVTKTF----RG--------------VYENVNAR-------------------CAL 448
Query: 316 LCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPK-- 373
L G G+GKTT A + A+ GY+V+E NASD+R+ + +E KI ++ +A + K
Sbjct: 449 LSGSAGIGKTTTAKIVAESSGYNVIEFNASDERNKAAVE-KISEMATGGYSIASIKSKKL 507
Query: 374 ---CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKAS 430
C+++DE+DG KG ILKM+ +K C
Sbjct: 508 TKTCIIMDEVDGMSSGDKGGSAAILKMI-----------------------EKTKC---- 540
Query: 431 LLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTL 490
P+ICICND +R+L F P+ + VV RL IC E + AL L
Sbjct: 541 ---PIICICNDRQNSKMRTLANKCYDLKFTTPNKNSVVKRLLEICKQEDIMMEPNALELL 597
Query: 491 AEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQ 543
E T D+R LN LQ L K + NV + D S S+ + W Q
Sbjct: 598 WESTNGDMRQMLNALQLLSKTENYTNVFN-------DNDKSASSINKWNAYAQ 643
>gi|428186666|gb|EKX55516.1| chromosome transmission fidelity protein 18, partial [Guillardia
theta CCMP2712]
Length = 132
Score = 122 bits (305), Expect = 1e-24, Method: Composition-based stats.
Identities = 62/164 (37%), Positives = 93/164 (56%), Gaps = 33/164 (20%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSR 371
++LLL GPPG GKTTLAHV AKH GY E+NASD+R++S ++ ++ + +M R
Sbjct: 1 QILLLHGPPGTGKTTLAHVLAKHAGYFPAEINASDERTASALKIRLEALAEMRGSFTGGR 60
Query: 372 PKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASL 431
P C+++DE+DG +G +G V+ K S+
Sbjct: 61 PNCIILDEVDG-IGGNEGQVD--------------------------------NQKHVSV 87
Query: 432 LRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHIC 475
RP+ICICND+YA +LR++++IA + F P R++SRL+ IC
Sbjct: 88 NRPIICICNDVYASSLRAVKKIAHIVRFAPPEEQRMISRLQTIC 131
>gi|317029323|ref|XP_001391351.2| chromosome transmission fidelity protein 18 [Aspergillus niger CBS
513.88]
Length = 1040
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 152/590 (25%), Positives = 243/590 (41%), Gaps = 119/590 (20%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILD------VVQMN 364
+KVLLLCGPPGLGKTTLAHV A+ GY V+E+NASDDRS ++ +I D V MN
Sbjct: 367 RKVLLLCGPPGLGKTTLAHVCARQAGYEVLEINASDDRSKDVVKGRIRDSLGTENVKGMN 426
Query: 365 ------SVMADSRPKCLVIDEIDGALGDGKGA-----VEVILKMVSAERKSNTAKENVAK 413
V RP C+V+DE+DG + G ++ ++ +V ++K+++ K
Sbjct: 427 VEIGEEKVRKAGRPVCVVVDEVDGVVSGSGGGGEGGFMKALIDLVLLDQKNSSGSTEQTK 486
Query: 414 EDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLR--QIAKVHVFIQPSVSRVVSRL 471
+KK LRP+I +CND+Y P+LR LR +A++ Q + VV+R+
Sbjct: 487 -------GRKKKGDNFRFLRPLIMVCNDVYHPSLRPLRAASVAEIIHVRQAPLENVVTRM 539
Query: 472 KHICNNESMKTSSIALTTLAEYT-----------------ECDIRSCLNTLQFLDKK--- 511
K I E + + + + L E + E DIRS L +++ K
Sbjct: 540 KRIFTVEGIPSDNDGVRRLCEASWGLARRKQGGVKSSGTAEGDIRSVLVAAEWVAHKLRN 599
Query: 512 --------------KEILNVMDIGSQVVGRKDMSRSAF-DIWKEIFQKRK--------TK 548
+++L+ GS K ++R D+ + +F +
Sbjct: 600 ECPSTLRLTRSWLEQKVLSANSSGSAFF--KGLNRGGVRDLIERVFTEGAGFTDAPVGVD 657
Query: 549 RLRNSVSSSSN----------VSNEFDFLHSLISNRGDYD-VIFDGIHENILQLQYHDPV 597
R+ S+S + + + L ++ G++D + + LQ D
Sbjct: 658 SFRDPFSNSEDKVPVGVADLRKRHAIERLREMVDASGEHDRAVAECFASYPLQSYQDDTF 717
Query: 598 MLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQ----KPNL---- 649
+ K D L D M + Q L Y + H L + Q P +
Sbjct: 718 LSKPNAAYDWLHFHDTMSSKVYTAQDWELSAYLSQSVVAFHHLFATAQGKAKAPEINDEE 777
Query: 650 -EWPKSYQRYRNAFMEKMD----IFKSWHSKIPPYISRHL-STESLVEDSISPLLHILSP 703
E P S R A E I + S +SR ST+SLV D I L+ +LS
Sbjct: 778 EEHPFSGPRADFAAYEAQKQNRAILTEFQSAFSAPLSRLFRSTDSLVIDLIPNLVRMLS- 836
Query: 704 PTLRPVALH----------LLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVS 753
P ++PV + + E+ + V M + ++ + + N G +
Sbjct: 837 PDVKPVVVRGSGEQRSVASVRKESERTLIQAAVRVMAGLGVRFEKVR----IENAG---A 889
Query: 754 HDVSTLSFDPPINEFITFKGYR-----SNHYVLALAVKQVLVHEVEKQRI 798
H +PP++ FITF + S + A++QVL E K+ I
Sbjct: 890 HGGWAYRMEPPLDTFITFSKTKSAPTASGSAPVRYAIRQVLDQEYRKENI 939
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEE 243
+W +KY FTEL+ DE+T+R VL WLK W+ VF + RS +++
Sbjct: 310 MWTEKYRARKFTELIGDERTHRSVLRWLKAWEPIVFPNIARSKAKK 355
>gi|390597652|gb|EIN07051.1| P-loop containing nucleoside triphosphate hydrolase protein,
partial [Punctularia strigosozonata HHB-11173 SS5]
Length = 220
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 111/200 (55%), Gaps = 34/200 (17%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LW D+Y P FT+L+ DE+ +RE L W+KQWD CVFG + I +N
Sbjct: 55 LWTDRYKPTRFTDLIGDERVHRETLAWVKQWDFCVFGPQ---------------KVIGKN 99
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
K +K + WS ++ + ++E S +D W + P++K+LLL
Sbjct: 100 K-------GKKRARDEWSPNAGSSNQDQDWEES-----KDEWKR-------PKEKLLLLS 140
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVI 377
GPPGLGKTTLAHV A+ GY V E+NASD RS S I+++I ++ + + S+P +VI
Sbjct: 141 GPPGLGKTTLAHVVAQQAGYSVFEINASDARSGSIIDDRIKPALEAGAAVGKSKPYLVVI 200
Query: 378 DEIDGALGDGKGAVEVILKM 397
DEIDGA G G A + K+
Sbjct: 201 DEIDGATGAGDNAGSFVQKL 220
>gi|156093631|ref|XP_001612854.1| replication factor C subunit 1 [Plasmodium vivax Sal-1]
gi|148801728|gb|EDL43127.1| replication factor C subunit 1, putative [Plasmodium vivax]
Length = 945
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 148/360 (41%), Gaps = 97/360 (26%)
Query: 172 FNKALNSSSEGQSDRSLP-EKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDS 230
+N+A++S + P E+ V QLWV+KY P + EL+ + Q ++ WL WD
Sbjct: 368 YNRAVHSEQKNPPSGGAPTEQREVLNQLWVEKYRPKNLNELVGNNQNVLKLKNWLASWDD 427
Query: 231 -CVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYEN 289
C+ G KKQ +F RG YEN
Sbjct: 428 VCIKGL----------------------KKQVTKTF----RG--------------VYEN 447
Query: 290 SNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRS 349
N++ LL G G+GKTT A + A+ GY V+E NASD+R+
Sbjct: 448 VNAR-------------------CALLSGSAGIGKTTTAKIVAESSGYSVIEFNASDERN 488
Query: 350 SSTIENKILDVVQMNSVMADSRPK-----CLVIDEIDGALGDGKGAVEVILKMVSAERKS 404
+ +E KI ++ +A + + C+++DE+DG KG ILK++
Sbjct: 489 KAAVE-KISEMATGGYSIASIKSRKLTKTCIIMDEVDGMSSGDKGGSAAILKLI------ 541
Query: 405 NTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSV 464
+K C P+ICICND +R+L F P+
Sbjct: 542 -----------------EKTKC-------PIICICNDRQNAKMRTLANKCYDLKFTTPNK 577
Query: 465 SRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV 524
+ VV RL IC E + AL L E T D+R LN LQ L K + + +D+ ++
Sbjct: 578 NSVVKRLLEICKQEDIMMEPNALELLWESTNGDLRQMLNALQLLSKTYKRIQFLDLKKEL 637
>gi|440634180|gb|ELR04099.1| hypothetical protein GMDG_01403 [Geomyces destructans 20631-21]
Length = 973
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 150/359 (41%), Gaps = 95/359 (26%)
Query: 191 KPVVHEQ---LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSA 247
+PV H + +W +KY F +L+ D++T+R+VL WLK
Sbjct: 206 EPVYHTRRTPMWTEKYRARRFFDLVGDDRTHRDVLRWLKG-------------------- 245
Query: 248 LRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTG 307
W F S + S G+ +K
Sbjct: 246 --------------------------WDPIVFPRSGKPKPVLSKKPGMHGEQEEK----- 274
Query: 308 PPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM 367
P +K+LLL GPPGLGKTTLAHV A GY ++E+NASDDRS++ ++ +I V SV
Sbjct: 275 -PHRKILLLTGPPGLGKTTLAHVCAMQAGYEIMEINASDDRSANVVKGRIRTSVGTESVK 333
Query: 368 -ADSRPK----------------CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKEN 410
++PK + G + ++ +V + K+ +
Sbjct: 334 NVGAKPKDGHKPKAVRPVCVVVDEVDGVVGGSGGSGEGGFIRALIDLVQLDAKNAVPRAT 393
Query: 411 VAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQ--IAKVHVFIQPSVSRVV 468
VAK + KKK LLRP+I ICND+Y P+LR LRQ A+V +P + V
Sbjct: 394 VAKPGR-----KKKEDDFFRLLRPMILICNDVYHPSLRQLRQSSFAEVIHIRKPPIDAVT 448
Query: 469 SRLKHICNNESMKTSSIALTTLAEY----------------TECDIRSCLNTLQFLDKK 511
+R+KH+ E + + + L E TE D+RS L +++ +K
Sbjct: 449 ARMKHVFEKEGVACEADGVRRLCEATWGLSPGPEAKFESSGTEGDLRSVLVVGEWVARK 507
>gi|429329515|gb|AFZ81274.1| chromosome replication factor, putative [Babesia equi]
Length = 845
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 111/201 (55%), Gaps = 25/201 (12%)
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA 368
PE+++LLL GPPG+GKTTL V A HCGY+VVE+N+SDDRS + + I V+ +SV
Sbjct: 248 PEKRILLLGGPPGVGKTTLIRVLAAHCGYNVVEINSSDDRSKNKVLPIITGVISASSVTP 307
Query: 369 DSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKK 428
+ CL+ D + +V +E A +N A K++ K
Sbjct: 308 GKQNLCLLED---------------VESLVHSETHIIAALKNFAN-----KLTAK---GN 344
Query: 429 ASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVV-SRLKHICNNESMKTSSIAL 487
++ RP+IC CND+YA L+ LR ++KV + ++P S V+ RL++I E + S L
Sbjct: 345 HAIRRPIICTCNDVYARHLKELRDVSKV-IILEPCDSVVLQQRLEYILEMEGLGIDSTFL 403
Query: 488 TTLAEYTECDIRSCLNTLQFL 508
+ DIRSCL+ L+FL
Sbjct: 404 QEIQNTYRNDIRSCLSALEFL 424
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 21/32 (65%)
Query: 199 WVDKYAPNSFTELLSDEQTNREVLLWLKQWDS 230
W DKYAP F++LL+ E N E L WL W+S
Sbjct: 206 WCDKYAPKYFSDLLTSEFVNLECLKWLSSWNS 237
>gi|68062632|ref|XP_673324.1| replication factor C subunit 1 [Plasmodium berghei strain ANKA]
gi|56491097|emb|CAH96916.1| replication factor C subunit 1, putative [Plasmodium berghei]
Length = 512
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 145/352 (41%), Gaps = 104/352 (29%)
Query: 190 EKPVVH--EQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDS-CVFGSEIRSTSEEVLS 246
E+ V H QLWVDKY P +L+ + Q ++ WL WD C+ G
Sbjct: 91 EQNVSHVLNQLWVDKYKPTKIEDLVGNTQNVFKLKTWLSSWDDVCIKGL----------- 139
Query: 247 ALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRST 306
KKQ +F RGN +EN N+K
Sbjct: 140 -----------KKQVTKTF----RGN--------------FENVNAK------------- 157
Query: 307 GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV 366
LL GP G+GKTT A + + GY+V+E NASD+R+ + +E KI D+
Sbjct: 158 ------CALLSGPAGIGKTTTAKIVSTSSGYNVIEFNASDERNKAAVE-KIGDMATGGYS 210
Query: 367 MA-----DSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKIS 421
+ + + C+++DE+DG KG ILK++
Sbjct: 211 ITSLNNKNLKKTCIIMDEVDGMSSGDKGGSSAILKLI----------------------- 247
Query: 422 KKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMK 481
+K C P+ICICND +R+L F P+ + VV RL IC E++
Sbjct: 248 EKTKC-------PIICICNDRQNSKMRTLANKCYDLKFTTPNKNSVVKRLLEICKKENIM 300
Query: 482 TSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRS 533
AL L E + DIR LN LQ L K + + +DI +KD++ S
Sbjct: 301 MEPNALELLWESSNGDIRQILNALQLLSKTYKRIQFLDI------KKDINNS 346
>gi|452986763|gb|EME86519.1| hypothetical protein MYCFIDRAFT_133189 [Pseudocercospora fijiensis
CIRAD86]
Length = 813
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 145/315 (46%), Gaps = 83/315 (26%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LW +KY FT+L+ DE+T+R V+ WLK+WD VF R +++ + + +
Sbjct: 71 LWTEKYRARKFTDLIGDERTHRHVMHWLKRWDQIVFPGSYRPK-------VKKGALVEEE 123
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRS-TGPPEQKVLLL 316
K H+K TGPP
Sbjct: 124 KP----------------------------------------HRKILMLTGPP------- 136
Query: 317 CGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQM------------N 364
GLGKTTLAHV A+ GY V E+NASD+RS++ ++ +I D+V
Sbjct: 137 ----GLGKTTLAHVCARQAGYEVQEINASDERSATVVKGRIRDMVGTENVKNVDNKTAEG 192
Query: 365 SVMADSRPKCLVIDE-----IDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEK 419
V ++P C+++DE G G V+ ++ ++ ++K+ +A Q
Sbjct: 193 KVKKAAKPVCVIVDEVDGVVGGSGGGGEGGFVKALIDLIMLDQKNTP----LASMSQAPA 248
Query: 420 ISKKKGCKKASLLRPVICICNDLYAPALRSLRQ--IAKVHVFIQPSVSRVVSRLKHICNN 477
+KKKG ++ LLRP+I +CND+Y P+LR LRQ +A+V +P V +V+RL+ +
Sbjct: 249 KNKKKG-ERFRLLRPLILVCNDVYHPSLRPLRQSSVAEVIHVRKPPVQSLVTRLQQVFEK 307
Query: 478 ESMKTSSIALTTLAE 492
E + + + L E
Sbjct: 308 EGVPCDTDGVRRLCE 322
>gi|401826523|ref|XP_003887355.1| putative DNA replication factor C complex large subunit
[Encephalitozoon hellem ATCC 50504]
gi|392998514|gb|AFM98374.1| putative DNA replication factor C complex large subunit
[Encephalitozoon hellem ATCC 50504]
Length = 569
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 147/318 (46%), Gaps = 56/318 (17%)
Query: 307 GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV 366
G + K LL G PG+GKTT+AHV K+ G+ +VE NASD RS S I +KI V SV
Sbjct: 139 GRTKYKAALLSGQPGIGKTTMAHVVCKYLGFDIVEFNASDVRSKSEIASKIRSFVNSQSV 198
Query: 367 -MADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKG 425
+ SR K L++DE+DG D G E++ N KE V
Sbjct: 199 CLGVSRKKVLIMDEVDGMSSDRGGIPELV----------NVIKETVI------------- 235
Query: 426 CKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSI 485
P+ICICND +R+L F +P +++SR+K+I + E K S
Sbjct: 236 --------PIICICNDRNNLKIRTLSNHCLDLRFRKPDPRQMISRIKYILDREGKKISDG 287
Query: 486 ALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKR 545
L + + D+R + +Q + K+ + + ++ RK++ ++ FDI E+FQ+R
Sbjct: 288 LLNEIISKSSGDMRYSIGMVQSIALKRALTPSV---AESFVRKNVMKNVFDIAGEVFQRR 344
Query: 546 KTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCL 605
+++ + D DY +I ++ENIL+ + L +C
Sbjct: 345 -------------SITEKIDLYFE------DYSLIPLFVNENILKTPFKSARDLS--ECF 383
Query: 606 DCLGNSDLMHQYIMRTQQ 623
D + D++ + + T Q
Sbjct: 384 DSISLGDIVEKLMRGTNQ 401
>gi|84997105|ref|XP_953274.1| replication factor C [Theileria annulata strain Ankara]
gi|65304270|emb|CAI76649.1| replication factor C, putative [Theileria annulata]
Length = 840
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 110/200 (55%), Gaps = 23/200 (11%)
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA 368
PE ++LL+ GPPG+GKT L +V AKHCGY+VVE+N+SDDR+ + I VV SV+
Sbjct: 255 PEHRILLIGGPPGVGKTCLVNVIAKHCGYNVVEINSSDDRTKGRVIPIINGVVSAGSVIP 314
Query: 369 DSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKK 428
+ +P +++++D G + LK +S+++ +AK D K
Sbjct: 315 N-KPNLCLLEDVDTLFGSELPIISY-LKQISSKK--------LAKGDPYIK--------- 355
Query: 429 ASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALT 488
RP+IC C D+YA L+ LR I+KV + S + SRL+ I + E + + +
Sbjct: 356 ----RPIICTCTDVYARQLKELRDISKVVIIDTCDPSVLQSRLEWILDEEGIYMADEFIK 411
Query: 489 TLAEYTECDIRSCLNTLQFL 508
+ E DIRSCL T++F+
Sbjct: 412 EIIETCRNDIRSCLTTMEFI 431
Score = 47.8 bits (112), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 58/136 (42%), Gaps = 23/136 (16%)
Query: 100 VEVEEKFVSRYASEIDGDCLPVTAPSGGDRVYVKISSSGVEERVKKLDVRAHSNSLTSEP 159
+E E F R C+ T P + YVK + EE +K SL +EP
Sbjct: 123 LEAGETFALR------SSCISTTNPPLYMKYYVKDEEN--EEELK--------TSLLTEP 166
Query: 160 IDVLLQKV-EQEAFN-KALNSSSEGQSDRSLPEKPVVHE-----QLWVDKYAPNSFTELL 212
I L +K+ E E N K N + E R ++ E + WV KY P F++LL
Sbjct: 167 IQSLFKKIFENETHNYKVTNQNPERLFRRKRKRNKLMTETGDKKENWVSKYKPEFFSDLL 226
Query: 213 SDEQTNREVLLWLKQW 228
+ E N E L WL W
Sbjct: 227 TSENVNLESLRWLSSW 242
>gi|425773541|gb|EKV11889.1| Sister chromatid cohesion factor (Chl12), putative [Penicillium
digitatum Pd1]
gi|425775759|gb|EKV14011.1| Sister chromatid cohesion factor (Chl12), putative [Penicillium
digitatum PHI26]
Length = 944
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 164/710 (23%), Positives = 263/710 (37%), Gaps = 189/710 (26%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
+W +KY FT+L+ DE+T+R VL WLK W+S VF +S R ++Q
Sbjct: 214 MWTEKYRARKFTDLIGDERTHRSVLRWLKGWESIVFPGLAKS----------RPKKLAQE 263
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKT-RSTGPPEQKVLLL 316
N EY H+K +GPP
Sbjct: 264 -------------------------NEEEY-----------IHRKVLLLSGPP------- 280
Query: 317 CGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILD------VVQMNSVMAD- 369
GLGKTTLAHV A+ G+ V+E+NASDDRS ++ +I D V MN + D
Sbjct: 281 ----GLGKTTLAHVCARQAGFEVLEINASDDRSRDVVKGRIRDALGTENVKGMNVEVGDK 336
Query: 370 -----SRPKCLVIDEIDGALGDGKGA-----VEVILKMVSAERKSNTAKENVAKEDQPEK 419
+P C+V+DE+DG G ++ ++++V ++++ AK
Sbjct: 337 KVRRAGKPVCVVVDEVDGVTGGSGSGGEGGFMKALIELVLLDQRN-------AKLSSEGN 389
Query: 420 ISKKKGCKKASLLRPVICICNDLYAPALRSLR--QIAKVHVFIQPSVSRVVSRLKHICNN 477
KK+ +RP+I +CNDLY +LR LR IA++ Q + +V R+K I +
Sbjct: 390 NGKKRKGDNFRFMRPLILVCNDLYHSSLRPLRASSIAEMISVRQAPLENIVQRVKVIFSR 449
Query: 478 ESMKTSSIALTTLAEY-----------------TECDIRSCLNTLQFLDKK--------- 511
E + S L E E DIRS L +F+ K
Sbjct: 450 EGIPCDSDGARRLCEAAWGMPSRKQRSGKTQGSAEGDIRSVLVAAEFVAHKLRNESLPSS 509
Query: 512 ---------KEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNS-VSSSSNVS 561
+LN GS K++SR +EI + T+ S +
Sbjct: 510 LRLTRNWLENRVLNASAEGSAFF--KELSRGGV---REIVNRVFTEGAGFSDAPVGMSFQ 564
Query: 562 NEFDF--------------------LHSLISNRGDYD-VIFDGIHENILQLQYHDPVMLK 600
+ FD L +I + GD+D + D +Q D K
Sbjct: 565 DRFDTPNSRIPVGVADLRKRHAINRLREMIDSSGDHDRCVSDCFASYPIQQYQDDNYFSK 624
Query: 601 TVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQI---------------- 644
D L D + + +Q+ L Y + H L +
Sbjct: 625 PNAAHDWLHFHDSISSKVHSSQEWELIPYLSQSVVAFHHLFATATGRTTDDDKNDDDEEA 684
Query: 645 QKPN-LEWPKS-YQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILS 702
++P+ PK+ + + + + S P S ES++ D + L+ +LS
Sbjct: 685 EEPHPFSGPKADFAAFEAQKQNRAAMIAFNASFSAPMARIFRSNESIITDLVPYLIRMLS 744
Query: 703 PPTLRPVALH----------LLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEV 752
P ++PV + + E+ + V M +T++ + + +E
Sbjct: 745 -PDIKPVVIRGNGEQRSTATVRKESERALVQSAVRVMTGMGVTFEKVRVE-------HEG 796
Query: 753 SHDVSTLSFDPPINEFITFKGYRSNH-------YVLALAVKQVLVHEVEK 795
SH +PPI+ + F + + + AV+QVL E K
Sbjct: 797 SHGGWAYRMEPPIDSLVVFSKIKGSSIEASGGTVPVRYAVRQVLDQEYRK 846
>gi|221052935|ref|XP_002257842.1| replication factor C subunit 1 [Plasmodium knowlesi strain H]
gi|193807674|emb|CAQ38378.1| replication factor C subunit 1, putative [Plasmodium knowlesi
strain H]
Length = 900
Score = 119 bits (298), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 149/360 (41%), Gaps = 97/360 (26%)
Query: 172 FNKALNSSSEGQSDRSLP-EKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDS 230
+N+ +S E S P ++ + QLWV+KY P S EL+ + Q ++ WL WD
Sbjct: 323 YNRGTHSEKETPPKCSAPGDQQKILNQLWVEKYRPRSLNELVGNTQNVLKLKNWLASWDD 382
Query: 231 -CVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYEN 289
C+ G KKQ +F RG YEN
Sbjct: 383 VCIKGL----------------------KKQVTKTF----RG--------------VYEN 402
Query: 290 SNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRS 349
N++ LL G G+GKTT A + A+ GY+V+E NASD+R+
Sbjct: 403 VNAR-------------------CALLSGSAGIGKTTTAKIVAESSGYNVIEFNASDERN 443
Query: 350 SSTIENKILDVVQMNSVMADSRPK-----CLVIDEIDGALGDGKGAVEVILKMVSAERKS 404
+ +E KI ++ +A + + C+++DE+DG KG ILK++
Sbjct: 444 KAAVE-KISEMATGGYSIASIKSRKLTKTCIIMDEVDGMSSGDKGGSAAILKLI------ 496
Query: 405 NTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSV 464
+K C P+ICICND +R+L F P+
Sbjct: 497 -----------------EKTKC-------PIICICNDRQNSKMRTLANKCYDLKFTSPNK 532
Query: 465 SRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV 524
+ VV+RL IC E + AL L E T D+R LN LQ L + + + +D+ ++
Sbjct: 533 NSVVNRLLEICKKEDITMEPNALELLWESTNGDMRQMLNALQLLSRTYKRIQFLDLKKEL 592
>gi|119719184|ref|YP_919679.1| replication factor C large subunit [Thermofilum pendens Hrk 5]
gi|150415669|sp|A1RWU6.1|RFCL_THEPD RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|119524304|gb|ABL77676.1| replication factor C large subunit [Thermofilum pendens Hrk 5]
Length = 413
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 177/374 (47%), Gaps = 65/374 (17%)
Query: 297 DSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENK 356
+SW K G P +K LL GPPG GKT++ H AK + ++E+NASD R+ ++ +
Sbjct: 38 NSWVK-----GKPSKKAALLYGPPGSGKTSIVHATAKEFSWELIELNASDVRTREALQQR 92
Query: 357 ILDVVQMNSVMADSRPKCLVIDEIDG-ALGDGKGAVEVILKMVSAERKSNTAKENVAKED 415
+L + SV+ S K +++DE+DG + + G ++ I++++ KSN
Sbjct: 93 LLGALNTRSVLGYS-GKIILLDEVDGISTKEDAGGLQAIVELIE---KSNW--------- 139
Query: 416 QPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHIC 475
P++ ND + P LR LR + ++ F + ++ L++IC
Sbjct: 140 ------------------PIVLTANDPWDPKLRPLRDLCELIEFKKIGKRDIMKVLENIC 181
Query: 476 NNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAF 535
+ E ++ S L+ +A+ + D+R+ +N LQ L K+ +++ D+ Q++G + + F
Sbjct: 182 SKEGVECSREVLSAIADNAKGDLRAAINDLQSLAMGKKTISLADL--QILGDRAEQETIF 239
Query: 536 DIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHD 595
DI + + + ++ + L SL DY+++ + ENI+ QY +
Sbjct: 240 DIVRSVLTAKYPEQ-----------ALAVTRLPSL-----DYEMLMQWLSENIV-YQY-E 281
Query: 596 PVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSY 655
P + D L +D+M + R QQ L Y L + + S ++P P +
Sbjct: 282 PSLQAIADAYDALSWADIMLTRMKREQQWALLSY--ALELMTAGVASARERP----PFKF 335
Query: 656 QRYRNAFMEKMDIF 669
+Y +F EK+ I
Sbjct: 336 VKY--SFPEKLRIL 347
>gi|380494780|emb|CCF32893.1| ATPase [Colletotrichum higginsianum]
Length = 968
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 127/242 (52%), Gaps = 31/242 (12%)
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV-- 366
P +K+L+L GPPGLGKTTLAHV A+ GY V+E+NASDDRS ++++I + SV
Sbjct: 281 PHKKILMLTGPPGLGKTTLAHVCARQAGYDVMEINASDDRSRDVVKSRIRTSLGTESVKT 340
Query: 367 ------------MADSRPKCLVIDEIDGALGDGKGA-----VEVILKMVSAERKSNTAKE 409
++P C+++DE+DG +G + V ++ +V ++K++
Sbjct: 341 VENVKAKDGETLQKVAKPACVIVDEVDGVVGGSGSSGEGGFVRALIDLVLLDQKNSAGAS 400
Query: 410 NVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQ--IAKVHVFIQPSVSRV 467
N A KKK L+RP+I ICND+Y P+LR LRQ +A+V +P + V
Sbjct: 401 NAANR-------KKKKGDDFRLMRPLILICNDVYHPSLRPLRQSGMAEVIHVGKPGIDAV 453
Query: 468 VSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKE--ILNVMDIGSQVV 525
V+RLK + + E + A + E I S ++ + + E + VM +G V
Sbjct: 454 VTRLKAVLDKEGIPCEKDAARKICE-AAWGITSGIDAKRGAESGTEGDLRGVMVVGEWVA 512
Query: 526 GR 527
GR
Sbjct: 513 GR 514
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 24/36 (66%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVF 233
LW +KY +F +L D+ TNR VL WLK+WD VF
Sbjct: 222 LWTEKYRAKNFLDLCGDDGTNRMVLRWLKRWDPIVF 257
>gi|19173693|ref|NP_597496.1| DNA REPLICATION FACTOR C SUBUNIT [Encephalitozoon cuniculi GB-M1]
gi|19170899|emb|CAD26673.1| DNA REPLICATION FACTOR C SUBUNIT [Encephalitozoon cuniculi GB-M1]
Length = 568
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 157/349 (44%), Gaps = 62/349 (17%)
Query: 307 GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV 366
G + K +LL G PG+GKTT AHV K G +V+E NASD RS I NK+ V S+
Sbjct: 141 GRTKYKAVLLSGQPGIGKTTTAHVVCKSLGLNVIEFNASDVRSKLEISNKVKAFVSSQSI 200
Query: 367 M--ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKK 424
+ S+ K L++DE+DG D G E+I + KE V
Sbjct: 201 LRPGSSKSKVLIMDEVDGMSSDRGGIPELI----------SIVKETVV------------ 238
Query: 425 GCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSS 484
P+ICICND P +R+L F +P +++SR+K I + E K
Sbjct: 239 ---------PIICICNDRNNPKIRTLSSYCLDLRFRKPDARQILSRVKQILDMEGKKIPD 289
Query: 485 IALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQK 544
L + DIR ++ +Q + +K LN + + +V RK++ ++ FD+ E+FQ+
Sbjct: 290 GLLNEIISRGAGDIRYTISMVQSIALRKA-LN-LKVAENLV-RKNVVKNVFDVAGEVFQR 346
Query: 545 RKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKC 604
R ++S + D DY +I + ENIL+ + L +C
Sbjct: 347 R-------------SISEKIDLYFE------DYSLIPLFVSENILKTSFRSARDLS--EC 385
Query: 605 LDCLGNSDLMHQYIMRTQQ----MPLY-VYQPPLAITVHRLVSQIQKPN 648
D + D++ + I Q PL+ VY + L+ +++ P+
Sbjct: 386 FDSISLGDVVEKLIRGVSQDWSLAPLHAVYSVVVPTKGRHLMKKLEFPS 434
>gi|449018911|dbj|BAM82313.1| replication factor C subunit 1 [Cyanidioschyzon merolae strain 10D]
Length = 900
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 160/387 (41%), Gaps = 107/387 (27%)
Query: 183 QSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSE 242
++ ++P + +LW KY P TELL++ +++ WL+ W S V+G+
Sbjct: 263 ETKENVPARMNAQAELWTVKYHPRQATELLANPGVLKQLEDWLRTW-SQVYGAA------ 315
Query: 243 EVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKK 302
+ N SS +RG R +NGN N L
Sbjct: 316 --------------DHTSNRSSSANGSRG-RITNGN----NKLP---------------- 340
Query: 303 TRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQ 362
+ LL GPPG+GKT+ AH A+ CGY +E NASD R+ S++ + ++++
Sbjct: 341 ---------RAALLAGPPGIGKTSAAHAVARQCGYEPIEFNASDTRNRSSLHETVAELLR 391
Query: 363 MNSVMA--DSRP---------------------KCLVIDEIDGALGDGKGAVEVILKMVS 399
++ A RP + L++DEIDG +G + + +++
Sbjct: 392 SRTMHAFGQGRPHLELAGTSKGLWRNKLPAPQGQVLIMDEIDGMSSGDRGGLAELSRLI- 450
Query: 400 AERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVF 459
RKS P+ICICND +P LR+L+ F
Sbjct: 451 --RKSRV---------------------------PIICICNDDSSPNLRTLKYSTLYLRF 481
Query: 460 IQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQ-FLDKKKEILNVM 518
+P S++ RL+ I E ++ AL LAE DIR + +Q + E L+ M
Sbjct: 482 RRPMWSQIRKRLQEIAQKEGLRVDDAALEKLAEACHGDIRQMITMMQLYSGSSSERLSYM 541
Query: 519 DIG--SQVVGRKDMSRSAFDIWKEIFQ 543
D+ ++ +G+ +S F ++ F
Sbjct: 542 DVKQLNEFLGKTFEDQSVFQLFGLFFH 568
>gi|255722517|ref|XP_002546193.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240136682|gb|EER36235.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 829
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 123/503 (24%), Positives = 224/503 (44%), Gaps = 98/503 (19%)
Query: 305 STGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASD------------------ 346
S G P +K+LL+ GP G+GKTT H+ A GY V E+NAS+
Sbjct: 214 SLGRPFRKILLIHGPTGIGKTTATHILANQMGYSVQELNASNSMDTLPQASGGGGGSTAY 273
Query: 347 DRSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNT 406
+S+ ++ KI++ + NS+ + +P CL+IDEID +L + ++V+ +V +++++
Sbjct: 274 SNASAALKLKIINALTSNSISSKGKPSCLIIDEID-SLANVSDVIKVLNDLVQSDQRALN 332
Query: 407 AKENVAKEDQPEKISKKKGCKKASLL-RPVICICNDLYAPA--------LRSLRQIAKVH 457
K D P+ +K K KK LL RP+ICI ND+Y+ + LR I+++
Sbjct: 333 KKLRKPSLDDPQ--AKNKSKKKDFLLNRPIICIANDIYSQQSNRYGPNPMDKLRPISEIV 390
Query: 458 VFIQPSVSRVVS--------------RLKHICNNESMKTSSIALTTLAEYTECDIRSCLN 503
F +P ++ VS L +I + E + + + E + DIR+C+N
Sbjct: 391 AFKKPVTAKAVSGAKFGGNAVKSVKDHLMNINSREKLGLDYQEIGDVVEICDSDIRACIN 450
Query: 504 TLQFLDKKKEILNVMDIGSQVVGRKDMSR--SAFDIWKEIFQK-------RKTKRLRNSV 554
LQF +K V+ + +V + M R S F + ++F++ + R+ NS
Sbjct: 451 HLQFNSRK-----VVTVDQKVNNNELMDRQLSWFAMVDQLFKRDPQLSKEQNFNRIFNSF 505
Query: 555 SSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYH-DPVMLKTVKCLDCLGNSDL 613
S ++ +N +D + G+ + L + ++ D ++K + D +G
Sbjct: 506 MSGEG--------KTITNNSSTFDKVLKGVFDRYLDVVHNQDDSLIKPSEFSDWVG---- 553
Query: 614 MHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQR-----YRNAFMEKMDI 668
Y ++ Y P L + L S++ P+ Y + +N E ++
Sbjct: 554 --VYAQFSKHNDTNEYFPLLGLKTWSLFSELN------PQRYNQSLIPNAKNLDFEHYEL 605
Query: 669 FKSWHSKIPPYISRHLSTESLVEDSISP---LLHILSPPTLRPVALHLLSAKEKNDL--- 722
K+ + I +S L + + I+P L P L + LSA+ K+DL
Sbjct: 606 LKT-NKNIIKTVSDSLPVKVQLALGINPENAATQFL--PYLAKIVCPSLSARLKSDLNDT 662
Query: 723 -----AQLVSAMVSYSLTYKNTK 740
++ S + + L+ +N+K
Sbjct: 663 EKKWVEKIASIVKDFDLSLENSK 685
Score = 40.8 bits (94), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 197 QLWVDKYAPNSFTELLS--DEQTNREVLLWLKQWDSCVFGSEI 237
++W +KY P SF +L S +++ R VL WLK+W VF +I
Sbjct: 164 KIWTEKYKPTSFIQLCSAGNDKQYRLVLHWLKKWSHTVFHEDI 206
>gi|448086455|ref|XP_004196105.1| Piso0_005549 [Millerozyma farinosa CBS 7064]
gi|359377527|emb|CCE85910.1| Piso0_005549 [Millerozyma farinosa CBS 7064]
Length = 790
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 121/240 (50%), Gaps = 42/240 (17%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRS-----------------SSTI 353
+K+LL+CGPPG+GKT AH+ AK GY V E+NA++ S+ +
Sbjct: 177 KKILLICGPPGIGKTVAAHILAKQSGYSVQEINAANSMDKLPQSDTPSGAQGFANVSAAL 236
Query: 354 ENKILDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAK 413
KI + + NS+ ++++P CLVIDEID + G ++V+ +V +RK A+
Sbjct: 237 RLKITNALTTNSLTSNNKPTCLVIDEIDSSANAGD-IMKVLYDLVQLDRKK--ARRTTKP 293
Query: 414 EDQPEKISKKKGCKKASLLRPVICICNDLY---------APALRSLRQIAKVHVFIQP-- 462
+ K S K+ K+ SL RP+ICI ND+Y + +L LRQI+++ F +P
Sbjct: 294 KTFGSKASSKEQKKEFSLNRPIICIANDIYSTSGSRFNKSASLEKLRQISEIISFRKPHL 353
Query: 463 -----------SVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKK 511
SV + L I + E + + + + E DIR+C+N +QF +K
Sbjct: 354 AKSSVNSKPGNSVRSLKEHLMVINDAEKLGMDYQEIGEVIDVCEGDIRACINYMQFNGRK 413
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 190 EKPVVHEQLWVDKYAPNSFTELLS--DEQTNREVLLWLKQWDSCVF 233
E V E+LW +KY PN F +L S +++ R VL WL++WD VF
Sbjct: 120 ETKKVGEKLWTEKYCPNRFMDLCSAGNDKQYRLVLHWLRKWDPLVF 165
>gi|449329092|gb|AGE95366.1| DNA replication factor c subunit [Encephalitozoon cuniculi]
Length = 568
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 156/349 (44%), Gaps = 62/349 (17%)
Query: 307 GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV 366
G + K +LL G PG+GKTT AHV K G +V+E NASD RS I NK+ V S+
Sbjct: 141 GRTKYKAVLLSGQPGIGKTTTAHVVCKSLGLNVIEFNASDVRSKLEISNKVKAFVSSQSI 200
Query: 367 M--ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKK 424
+ S+ K L++DE+DG D G E+I + KE V
Sbjct: 201 LRPGSSKSKVLIMDEVDGMSSDRGGIPELI----------SIVKETVV------------ 238
Query: 425 GCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSS 484
P+ICICND P +R+L F +P ++ SR+K I + E K
Sbjct: 239 ---------PIICICNDRNNPKIRTLSSYCLDLRFRKPDARQIFSRVKQILDMEGKKIPD 289
Query: 485 IALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQK 544
L + DIR ++ +Q + +K LN + + +V RK++ ++ FD+ E+FQ+
Sbjct: 290 GLLNEIISRGAGDIRYTISMVQSIALRKA-LN-LKVAENLV-RKNVVKNVFDVAGEVFQR 346
Query: 545 RKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKC 604
R ++S + D DY +I + ENIL+ + L +C
Sbjct: 347 R-------------SISEKIDLYFE------DYSLIPLFVSENILKTSFRSARDLS--EC 385
Query: 605 LDCLGNSDLMHQYIMRTQQ----MPLY-VYQPPLAITVHRLVSQIQKPN 648
D + D++ + I Q PL+ VY + L+ +++ P+
Sbjct: 386 FDSISLGDVVEKLIRGVSQDWSLAPLHAVYSVVVPTKGRHLMKKLEFPS 434
>gi|449687856|ref|XP_002167501.2| PREDICTED: chromosome transmission fidelity protein 18 homolog,
partial [Hydra magnipapillata]
Length = 283
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 108/200 (54%), Gaps = 15/200 (7%)
Query: 345 SDDRSSSTIENKILDVVQMNSVMADS-RPKCLVIDEIDGALGDGKGAVEVILKMVSAERK 403
+DDRS NKI QM +V+ + RP CLVIDEIDGA A+ +L ++ A
Sbjct: 60 NDDRSPEIFLNKIESATQMKAVLGEQKRPNCLVIDEIDGA---PVQAINTLLAIIKATDV 116
Query: 404 SNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPS 463
N ++ K+ + + L RP+ICICN+ Y PALR LR+ A F
Sbjct: 117 GNVKQKGKKKQKK-----------QLILNRPIICICNNQYVPALRELRKAALTLSFPMTV 165
Query: 464 VSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQ 523
+R+ +RL +I E + ++ L E E DIRSCLNTLQF+ +K + + DI S
Sbjct: 166 PARLANRLLNISRVEGLHIDMTSILLLCERAENDIRSCLNTLQFIRQKSKEVKPEDISSM 225
Query: 524 VVGRKDMSRSAFDIWKEIFQ 543
+G+KD+++ + I EIFQ
Sbjct: 226 TIGQKDLTKDSRRIVAEIFQ 245
>gi|50551489|ref|XP_503218.1| YALI0D24123p [Yarrowia lipolytica]
gi|49649086|emb|CAG81419.1| YALI0D24123p [Yarrowia lipolytica CLIB122]
Length = 870
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 165/331 (49%), Gaps = 50/331 (15%)
Query: 197 QLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQ 256
LWV+K P +L ++++L WL +W+S +F ++ S+ V
Sbjct: 239 HLWVEKLRPQKLLDLNGHSDRHKDILYWLSEWNSFIF----QTPSQAV------------ 282
Query: 257 NKKQNDSSFTRKNRGNRWSNGNFRNSNNLE-YENSNSKGIQDSWHKKTRSTGPPEQKVLL 315
F K R +W + S +E ++ S+G+ + + R P++++LL
Sbjct: 283 -------QFKAKQR-EKW----LKKSGRIEDAVHAGSRGVYEEREARDR----PQKRILL 326
Query: 316 LCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCL 375
+ G PG GKTT V A++ G++ +E+NASDDR S +L ++ +SV + RP C+
Sbjct: 327 VHGEPGTGKTTACGVLARNLGFNTLEMNASDDRGSEAFRRGVLGPMRTHSVTSKDRPNCV 386
Query: 376 VIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLL-RP 434
++DEIDGA ++ ++K+V + K E ++++ +K S K K +L+ RP
Sbjct: 387 ILDEIDGA---DPIFIDKLVKLVQRDEKEELWHE---RKNRHKKTSAKD--KLNTLISRP 438
Query: 435 VICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIA------LT 488
+ICI N+L+ L LR ++ + + S ++ + ++++ E MK + L
Sbjct: 439 IICIANNLHG-LLYKLRPHCRIVNYGRLSPAQSLRIVQNVFRTE-MKLQKLTSKQNRFLA 496
Query: 489 TLAEYTECDIRSCLNTLQFLDKKKEILNVMD 519
+ T+ DIR +N LQF + + N++D
Sbjct: 497 DICNSTDGDIRQAINILQFGTPEADTANLVD 527
>gi|68475979|ref|XP_717930.1| hypothetical protein CaO19.3239 [Candida albicans SC5314]
gi|68476110|ref|XP_717864.1| hypothetical protein CaO19.10749 [Candida albicans SC5314]
gi|46439598|gb|EAK98914.1| hypothetical protein CaO19.10749 [Candida albicans SC5314]
gi|46439666|gb|EAK98981.1| hypothetical protein CaO19.3239 [Candida albicans SC5314]
Length = 853
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 161/332 (48%), Gaps = 65/332 (19%)
Query: 307 GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDD----------------RSS 350
G P +K+LL+ GP G+GKTT++H+ AKH GY V E+NA++ ++
Sbjct: 235 GRPYKKILLIHGPTGIGKTTISHILAKHMGYTVQELNAANSMDTLPQASGGGSTAYTNAA 294
Query: 351 STIENKILDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKEN 410
S ++ KI++ + NS+ + +P CL+IDEID +L + V+V+ +V A+ ++ K
Sbjct: 295 SALKLKIVNALTSNSIHSQGKPSCLIIDEID-SLANINDVVKVLNDLVQADHRALNKK-- 351
Query: 411 VAKEDQPEKISKKKGCKKASLL--RPVICICNDLYAPA--------LRSLRQIAKVHVFI 460
K E+I KK KK + RP+ICI ND+Y+ + LR I+++ F
Sbjct: 352 -LKRSSTEEIEAKKKSKKKDIFLNRPIICIANDIYSQQSNRFGPNPMEKLRPISEIIQFR 410
Query: 461 QPSVSRVVS--------------RLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQ 506
+P+ S+ S L I E+M + + E E DIR+C+N +Q
Sbjct: 411 KPTTSKTSSGAKTGGNAIKSVKDYLMQINKQENMGLDHQEIGDIVEICEGDIRACINHMQ 470
Query: 507 FLDKKKEILNVMDIGSQVVGRK----DMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSN 562
F + ++D + + + D S F + ++F++ +S N++
Sbjct: 471 FNSR------IVDTIERRISKDTHLIDRQLSWFAMTDQLFKRDP------QLSKEENLAR 518
Query: 563 EFD-FLH----SLISNRGDYDVIFDGIHENIL 589
FD F++ +L SN G +D + GI + L
Sbjct: 519 LFDGFMNGEGRALASNSGTFDRVLKGIFDKYL 550
>gi|226286751|gb|EEH42264.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 928
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 140/321 (43%), Gaps = 93/321 (28%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
+W +KY F +L+ DE+T+R VL WLK WD+ VF L+ L+ +N
Sbjct: 263 MWTEKYRARKFKDLVGDERTHRSVLRWLKSWDAIVFPG---------LAKLK-----PKN 308
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
ND+ G R H+K VL+L
Sbjct: 309 TTGNDA-------GER-------------------------THRK----------VLVLT 326
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVI 377
GPPGLGKTTLAHV A+ GY V+E+NASD+RS ++ +I D V +V +
Sbjct: 327 GPPGLGKTTLAHVCARQAGYEVLEINASDERSRDIVKGRIRDAVGTENVKG-------IS 379
Query: 378 DEIDGALGDGKGA------------------------VEVILKMVSAERKSNTAKENVAK 413
E DG G ++ ++ +V +RK++ + ++
Sbjct: 380 VEADGKRIRKAGKPVCVVVDEVDGVVGGSGGSGEGGFMKALIDLVMLDRKNS---HSTSE 436
Query: 414 EDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLR--QIAKVHVFIQPSVSRVVSRL 471
K KKG K LLRP+I ICND+Y P+LR LR IA++ Q S+ +VV R+
Sbjct: 437 SASIHKRRYKKG-DKFLLLRPLILICNDVYHPSLRPLRTSSIAEILHVRQASLDKVVLRM 495
Query: 472 KHICNNESMKTSSIALTTLAE 492
K + E + + L E
Sbjct: 496 KTVFEREGIPCDGDGVRRLCE 516
>gi|238879601|gb|EEQ43239.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 853
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 161/332 (48%), Gaps = 65/332 (19%)
Query: 307 GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDD----------------RSS 350
G P +K+LL+ GP G+GKTT++H+ AKH GY V E+NA++ ++
Sbjct: 235 GRPYKKILLIHGPTGIGKTTISHILAKHMGYTVQELNAANSMDTLPQASGGGSTAYTNAA 294
Query: 351 STIENKILDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKEN 410
S ++ KI++ + NS+ + +P CL+IDEID +L + V+V+ +V A+ ++ K
Sbjct: 295 SALKLKIVNALTSNSIHSQGKPSCLIIDEID-SLANINDVVKVLNDLVQADHRALNKK-- 351
Query: 411 VAKEDQPEKISKKKGCKKASLL--RPVICICNDLYAPA--------LRSLRQIAKVHVFI 460
K E+I KK KK + RP+ICI ND+Y+ + LR I+++ F
Sbjct: 352 -LKRSSTEEIEAKKKSKKKDIFLNRPIICIANDIYSQQSNRFGPNPMEKLRPISEIIQFR 410
Query: 461 QPSVSRVVS--------------RLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQ 506
+P+ S+ S L I E+M + + E E DIR+C+N +Q
Sbjct: 411 KPTTSKTSSGAKTGGNAIKSVKDYLMQINKQENMGLDHQEIGDIVEICEGDIRACINHMQ 470
Query: 507 FLDKKKEILNVMDIGSQVVGRK----DMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSN 562
F + ++D + + + D S F + ++F++ +S N++
Sbjct: 471 FNSR------IVDTIERRISKDTHLIDRQLSWFAMTDQLFKRDP------QLSKEENLAR 518
Query: 563 EFD-FLH----SLISNRGDYDVIFDGIHENIL 589
FD F++ +L SN G +D + GI + L
Sbjct: 519 LFDGFMNGEGRALASNSGTFDRVLKGIFDKYL 550
>gi|326469781|gb|EGD93790.1| sister chromatid cohesion factor [Trichophyton tonsurans CBS
112818]
Length = 873
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 101/315 (32%), Positives = 146/315 (46%), Gaps = 81/315 (25%)
Query: 201 DKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQ 260
+KY SF +L+ D++T+R VL WLK WD VF +++ K +
Sbjct: 125 EKYRARSFKDLIGDDRTHRTVLRWLKAWDPIVF------------------PGLAKPKVK 166
Query: 261 NDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPP 320
D NF N DS + R K+LLL GPP
Sbjct: 167 KD---------------NFSN---------------DSEERAHR-------KILLLTGPP 189
Query: 321 GLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA------------ 368
GLGKTTLAH+ AK GY V+E+NASD+RS + + +I D V +V
Sbjct: 190 GLGKTTLAHICAKQVGYEVLEINASDERSRTVVTGRIKDAVGTENVRGVTIVEDGKVIRK 249
Query: 369 DSRPKCLVIDEIDGALGDGKGA-----VEVILKMVSAE-RKSNTAKENVAKEDQPEKISK 422
+P C++IDE+DG +G G ++ ++ +V + R S+ +K + + K
Sbjct: 250 PGKPVCVIIDEVDGVVGGSGGGGEGGFMKALIDLVQLDLRNSSRSKTDGQGTGRKGKKKG 309
Query: 423 KKGCKKASLLRPVICICNDLYAPALRSLRQ--IAK-VHVFIQPSVSRVVSRLKHICNNES 479
LLRP+I ICND+Y P+LR LRQ IA+ +HV P +VV R+K I E
Sbjct: 310 ----DNFRLLRPLILICNDVYHPSLRPLRQASIAEIIHVRRVP-FDQVVQRVKSIFEKEG 364
Query: 480 MKTSSIALTTLAEYT 494
++ + L E T
Sbjct: 365 IQCDADGARKLCETT 379
>gi|448081944|ref|XP_004195012.1| Piso0_005549 [Millerozyma farinosa CBS 7064]
gi|359376434|emb|CCE87016.1| Piso0_005549 [Millerozyma farinosa CBS 7064]
Length = 788
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 119/240 (49%), Gaps = 42/240 (17%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRS-----------------SSTI 353
+K+LL+CGPPG+GKT AH+ AK GY V E+NA++ S+ +
Sbjct: 175 KKILLICGPPGIGKTVAAHILAKQSGYSVQEINAANSMDKLPQSDTLSGAQGFANVSAAL 234
Query: 354 ENKILDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAK 413
KI + + NS+ ++++P CLVIDEID + G + V+ +V +RK A+
Sbjct: 235 RLKITNALTTNSLTSNNKPTCLVIDEIDSSANAGD-IMRVLYDLVQLDRKK--ARRTTKP 291
Query: 414 EDQPEKISKKKGCKKASLLRPVICICNDLY---------APALRSLRQIAKVHVFIQP-- 462
+ K S K K+ SL RP+ICI ND+Y + +L LRQI+++ F +P
Sbjct: 292 KTFGSKASSKDQKKEFSLNRPIICIANDIYSTSGSRFNKSASLEKLRQISEIISFRKPHL 351
Query: 463 -----------SVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKK 511
SV + L I + E + + + + E DIR+C+N +QF +K
Sbjct: 352 AKSSVNSKPGNSVRSLKEHLMVINDAEKLGMDYQEIGEVIDVCEGDIRACINYMQFNGRK 411
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 176 LNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLS--DEQTNREVLLWLKQWDSCVF 233
L S+ +G+ R K V E+LW +KY PN F +L S +++ R +L WL++WD VF
Sbjct: 105 LKSAIQGEKTRKRESKKV-GEKLWTEKYCPNRFVDLCSAGNDKQYRLILHWLRKWDPLVF 163
>gi|124801451|ref|XP_001349697.1| replication factor C subunit 1, putative [Plasmodium falciparum
3D7]
gi|3845304|gb|AAC71968.1| replication factor C subunit 1, putative [Plasmodium falciparum
3D7]
Length = 904
Score = 117 bits (292), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 139/337 (41%), Gaps = 96/337 (28%)
Query: 194 VHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQW-DSCVFGSEIRSTSEEVLSALRRHS 252
+ QLWV+KY P + EL+ + Q ++ WL W D C+ G I+ +++ +
Sbjct: 348 ILNQLWVEKYRPKNLNELVGNNQNVIKLQNWLASWEDVCIKG--IKKPAQKTFRGI---- 401
Query: 253 TISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQK 312
+EN N++
Sbjct: 402 ----------------------------------FENVNAR------------------- 408
Query: 313 VLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMN-SVMADSR 371
LL GP G+GKTT A + ++ GY+V+E NASD+R+ + +E KI ++ S+M+ +
Sbjct: 409 CALLSGPAGIGKTTTAKIVSEASGYNVIEFNASDERNKAAVE-KISEMATGGYSIMSLNN 467
Query: 372 PK----CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCK 427
K C+++DE+DG KG ILK++ +K C
Sbjct: 468 RKLTKTCIIMDEVDGMSSGDKGGSTAILKLI-----------------------EKTKC- 503
Query: 428 KASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIAL 487
P+ICICND +R+L F P + VV RL IC E + AL
Sbjct: 504 ------PIICICNDRQNNKMRTLANKCYDLKFSMPQKNSVVKRLLEICKKEGIMMEPNAL 557
Query: 488 TTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV 524
L E T DIR LNTLQ L K + +D+ ++
Sbjct: 558 ELLWESTCGDIRQMLNTLQLLSKTYTRIQFLDLKKEL 594
>gi|11999114|gb|AAG43050.1|AF139827_1 replication factor C subunit 1 [Plasmodium falciparum]
Length = 904
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 139/337 (41%), Gaps = 96/337 (28%)
Query: 194 VHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQW-DSCVFGSEIRSTSEEVLSALRRHS 252
+ QLWV+KY P + EL+ + Q ++ WL W D C+ G I+ +++ +
Sbjct: 348 ILNQLWVEKYRPKNLNELVGNNQNVIKLQNWLASWEDVCIKG--IKKPAQKTFRGI---- 401
Query: 253 TISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQK 312
+EN N++
Sbjct: 402 ----------------------------------FENVNAR------------------- 408
Query: 313 VLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMN-SVMADSR 371
LL GP G+GKTT A + ++ GY+V+E NASD+R+ + +E KI ++ S+M+ +
Sbjct: 409 CALLSGPAGIGKTTTAKIVSEASGYNVIEFNASDERNKAAVE-KISEMATGGYSIMSLNN 467
Query: 372 PK----CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCK 427
K C+++DE+DG KG ILK++ +K C
Sbjct: 468 RKLTKTCIIMDEVDGMSSGDKGGSTAILKLI-----------------------EKTKC- 503
Query: 428 KASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIAL 487
P+ICICND +R+L F P + VV RL IC E + AL
Sbjct: 504 ------PIICICNDRQNNKMRTLANKCYDLKFSMPQKNSVVKRLLEICKKEGIMMEPNAL 557
Query: 488 TTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV 524
L E T DIR LNTLQ L K + +D+ ++
Sbjct: 558 ELLWESTCGDIRQMLNTLQLLSKTYTRIQFLDLKKEL 594
>gi|123395219|ref|XP_001300705.1| differentiation specific element binding protein [Trichomonas
vaginalis G3]
gi|121881785|gb|EAX87775.1| differentiation specific element binding protein, putative
[Trichomonas vaginalis G3]
Length = 876
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 95/201 (47%), Gaps = 38/201 (18%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSR 371
K +LCGPPG+GK+T A + A +C YH +E+NASD RS ++ D+ ++ A S
Sbjct: 193 KCAILCGPPGIGKSTAATLVALYCDYHPIELNASDTRSKKSLNETFPDIFDNKAIDAKSG 252
Query: 372 PK--CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKA 429
CL+ DE+DG +G ++ + K V
Sbjct: 253 QDQICLIFDEVDGMSAGDRGGLQELTKFVD------------------------------ 282
Query: 430 SLLRPVICICNDLYAPALRSLRQIAKVHV---FIQPSVSRVVSRLKHICNNESMKTSSIA 486
+ PVICICND R L +AK V F P+ V SRL+ IC E MK S +
Sbjct: 283 RAINPVICICNDREN---RKLETLAKRSVDIKFATPTEQEVASRLRFICEQEGMKVSDES 339
Query: 487 LTTLAEYTECDIRSCLNTLQF 507
L +A+ + D R +NTLQF
Sbjct: 340 LLRIAQSSNGDFRHAINTLQF 360
>gi|150866055|ref|XP_001385524.2| hypothetical protein PICST_48947 [Scheffersomyces stipitis CBS
6054]
gi|149387311|gb|ABN67495.2| predicted protein, partial [Scheffersomyces stipitis CBS 6054]
Length = 725
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 156/346 (45%), Gaps = 102/346 (29%)
Query: 198 LWVDKYAPNSFTELLS--DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTIS 255
+W DKY P SF +L S +++ R +L WLK
Sbjct: 71 MWTDKYRPRSFVQLCSAGNDRQYRLILHWLK----------------------------- 101
Query: 256 QNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLL 315
+WS+ +R +++ + G+ S G P +K+LL
Sbjct: 102 -----------------KWSSVVYRE------DSTRNDGVD--------SLGRPHRKILL 130
Query: 316 LCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSS---------------STIENKILDV 360
+ GP G+GKTT H+ AK GY V E+NAS+ + + ++ KI +
Sbjct: 131 VHGPTGIGKTTAVHLLAKQLGYAVQELNASNSMDTLPQADSSEGRWGNVNAALKLKIKNA 190
Query: 361 VQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
+ N++ ++ +P CLVIDEID A+ G V+V+ +V+++++S+ +KE D EK
Sbjct: 191 LTSNAITSNGKPSCLVIDEIDSAINSGD-IVKVLNDLVASDQRSSRSKE----RDDSEKK 245
Query: 421 SKKKGCKKASLLRPVICICNDLY--------APALRSLRQIAKVHVFIQPSVSRVVSR-- 470
K K K L RP+ICI ND+Y + LR + ++ F +P +++ R
Sbjct: 246 KKNK-AKNFVLNRPIICIANDIYNTSSTRMGGSPMEKLRPLCEMVAFKKPVIAKTGRRGG 304
Query: 471 ---------LKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQF 507
L+ I E+ SS +T + E + DIR+CLN +QF
Sbjct: 305 NSLHSVKDHLQMITEKENWGYSSQDITEIVEVCDGDIRACLNHMQF 350
>gi|66363302|ref|XP_628617.1| RF-C paralog (Ctf18p) AAA+ ATpase [Cryptosporidium parvum Iowa II]
gi|46229621|gb|EAK90439.1| RF-C paralog (Ctf18p) AAA+ ATpase [Cryptosporidium parvum Iowa II]
Length = 914
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 110/210 (52%), Gaps = 20/210 (9%)
Query: 304 RSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQM 363
+ + PE +LL+ GP G GKT++ + AK CGY+V E+ SD+++ + EN I +
Sbjct: 303 KGSEAPEIPILLIGGPSGSGKTSMVKILAKQCGYNVNEIKVSDEKTIESFENSIKMGINF 362
Query: 364 NSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKK 423
++ S+P ++IDE+D G A ++S+ V K+S+
Sbjct: 363 GTIRGSSKPSLIMIDELDSLSNSG------------AVKRSDCFNFLV-------KLSET 403
Query: 424 KGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTS 483
+ ++ RP+ICICND++ +LRSLR + V P ++ RL ++C +E +K
Sbjct: 404 HSKTRETVSRPIICICNDIHERSLRSLRAKSLNIVIPSPPKEKIFKRLSYVCRSERLKLE 463
Query: 484 -SIALTTLAEYTECDIRSCLNTLQFLDKKK 512
L L + CDIRSCLN++ + +K+
Sbjct: 464 DDEILNELIKIHNCDIRSCLNSIYLMSQKE 493
Score = 41.6 bits (96), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 177 NSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSE 236
N + + R+ +PV+ KY P S +L++DE + R +L W+K WD+ VF SE
Sbjct: 245 NDFEKNEISRTYTNRPVL-----TTKYIPKSCLDLVNDEGSIRGILRWIKSWDNFVFKSE 299
>gi|209876712|ref|XP_002139798.1| replication factor C subunit protein [Cryptosporidium muris RN66]
gi|209555404|gb|EEA05449.1| replication factor C subunit protein, putative [Cryptosporidium
muris RN66]
Length = 845
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 151/362 (41%), Gaps = 102/362 (28%)
Query: 195 HEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTI 254
++LW DKY P++ E+L + + R+++ WL W S I
Sbjct: 260 EDKLWTDKYKPSNIDEILGNSEVIRKLVTWLNDW----------------------RSVI 297
Query: 255 SQNKKQN--DSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQK 312
+ KK+N ++F+ G+R+ + EN N++ +
Sbjct: 298 IEGKKKNPPKATFS---PGSRFP----------QIENINARAV----------------- 327
Query: 313 VLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIEN---------KILDVVQM 363
LL GPPG+GKTT A++ AK CGY +E+NASDDR+ S IE+ + D
Sbjct: 328 --LLSGPPGIGKTTTANLVAKECGYIAIEMNASDDRTKSVIEDLAESAIGGYTLTDFAHG 385
Query: 364 NSVMADSRPK-------CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQ 416
N +S+ L++DE+DG G +G + K++ +
Sbjct: 386 NINKFNSKYSENLNSNIVLIMDEVDGLGGSDRGGTAALGKLILKTK-------------- 431
Query: 417 PEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICN 476
P+IC+CND +R+L F +P S+++ R++ I +
Sbjct: 432 ----------------WPIICLCNDRQNEKVRNLASKCYDLRFSRPLKSQIIKRIQEISS 475
Query: 477 NESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFD 536
E + + A+ L E D+R LN LQ + K L +D+ +++ S+ D
Sbjct: 476 KEGLNIEANAIDLLCESVGNDLRQILNELQLMRLSKSTLRFIDMKNEISKPVKDSQVTLD 535
Query: 537 IW 538
I+
Sbjct: 536 IF 537
>gi|323449782|gb|EGB05667.1| hypothetical protein AURANDRAFT_30501, partial [Aureococcus
anophagefferens]
Length = 276
Score = 114 bits (286), Expect = 2e-22, Method: Composition-based stats.
Identities = 74/195 (37%), Positives = 102/195 (52%), Gaps = 18/195 (9%)
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA 368
P +++LL G PG GKTTLAHV A+ GY V E+NASD+RS+ +E + Q ++
Sbjct: 84 PLSRIILLTGEPGTGKTTLAHVLAEAAGYRVRELNASDERSADALEAAVRTAAQNRTLRT 143
Query: 369 -DSRPKCLVIDEIDGALGDGKGAVEVILKMVSA------------ERKSNTAKENVAKED 415
+P CLV+DE+DGA DGK A+ I+ M A R S +
Sbjct: 144 RRDKPTCLVLDELDGA--DGKAAINAIVAMAKAPLPAKSEPKAAKRRSSAFFGGDNGDGG 201
Query: 416 QPEKISKKKGCKKA--SLLRPVICICNDLYAPALRSLRQIAKVHVFIQ-PSVSRVVSRLK 472
K +G K L RPVIC+CND +AP +R LR++A V F + P R+ SRLK
Sbjct: 202 GGAAPRKARGGPKGPPPLTRPVICVCNDAFAPHMRPLREVALVFQFRKVPHNLRLASRLK 261
Query: 473 HICNNESMKTSSIAL 487
+ E + S A+
Sbjct: 262 AVAAGERVDVSPAAI 276
Score = 58.9 bits (141), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/37 (70%), Positives = 31/37 (83%)
Query: 197 QLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVF 233
QLWVDKYAP++F+ LLSDE++NREVL LK WD VF
Sbjct: 10 QLWVDKYAPSTFSHLLSDERSNREVLRALKDWDPYVF 46
>gi|428185974|gb|EKX54825.1| replication factor C subunit 1 [Guillardia theta CCMP2712]
Length = 821
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 110/221 (49%), Gaps = 50/221 (22%)
Query: 310 EQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMN----- 364
+Q ++L+ GPPGLGKTT+AHV A G+ +VE+NASDDRS+ I +++L + N
Sbjct: 352 QQNIILMTGPPGLGKTTIAHVLANFLGFEIVEINASDDRSADEI-DQVLGGMMGNQPITN 410
Query: 365 -------SVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
+V+ S+P L++DE+DG KG V+ ++++ +++R
Sbjct: 411 FFAPRGTAVVKKSKPLLLIMDEVDGMTSGEKGGVQKLIQLATSKRDR------------- 457
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
P+ICICND +A ALR +R F V+ RLK +C
Sbjct: 458 ---------------LPIICICNDEHAKALR-IR-------FYHLKGREVLPRLKEVCRL 494
Query: 478 ESMK-TSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNV 517
E K AL T+AE D+R+ +N LQ ++L +
Sbjct: 495 EQFKNVEDSALLTIAEIANGDLRTMINILQLARSSSDVLTL 535
>gi|71029248|ref|XP_764267.1| replication factor C [Theileria parva strain Muguga]
gi|68351221|gb|EAN31984.1| replication factor C, putative [Theileria parva]
Length = 1193
Score = 113 bits (282), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 110/201 (54%), Gaps = 25/201 (12%)
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA 368
PE K+LL+ GPPG+GKT+L +V AKHCGY+VVE+N+SDDR+ I V+ SV+
Sbjct: 614 PEHKILLIGGPPGVGKTSLVNVIAKHCGYNVVEINSSDDRTKGRAIPIINGVISAGSVVP 673
Query: 369 DSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKK 428
+ +P +++++D G L+++S + +IS KK K
Sbjct: 674 N-KPNLCLLEDVDTLFGSE-------LQIISYLK----------------QISSKKHPKG 709
Query: 429 ASLL-RPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIAL 487
+ RP+IC C D+Y+ L+ LR ++KV + S + SR++ + + E + + +
Sbjct: 710 GHFIKRPIICTCIDVYSRQLKELRDVSKVVIIDTCDPSVLQSRIEWVLDEEGIYMADELI 769
Query: 488 TTLAEYTECDIRSCLNTLQFL 508
+ E DIRSCL +++F+
Sbjct: 770 KEILETYRYDIRSCLTSMEFI 790
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 37/87 (42%), Gaps = 17/87 (19%)
Query: 154 SLTSEPIDVLLQKV---EQEAFNKALNSSSEGQSDRSLPEK---------PVVHEQLWVD 201
SL +EPI L +K+ E FN + G +R K + WV
Sbjct: 520 SLLAEPIHSLFKKIFDKETHNFN-----AKGGNQERLFRRKRKRSKSNAETTDRSENWVS 574
Query: 202 KYAPNSFTELLSDEQTNREVLLWLKQW 228
KY P F++LL+ E N E L WL W
Sbjct: 575 KYKPEYFSDLLTSENVNLECLRWLSSW 601
>gi|296083463|emb|CBI23421.3| unnamed protein product [Vitis vinifera]
Length = 91
Score = 113 bits (282), Expect = 6e-22, Method: Composition-based stats.
Identities = 48/67 (71%), Positives = 57/67 (85%)
Query: 576 DYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAI 635
DYD+I DGIHENI QL YHDP+M KTVKCL+ LG SDL+HQY+MRTQQM L VYQP AI
Sbjct: 25 DYDLILDGIHENIFQLHYHDPIMQKTVKCLNTLGISDLVHQYVMRTQQMSLNVYQPLTAI 84
Query: 636 TVHRLVS 642
++HRL++
Sbjct: 85 SLHRLIA 91
>gi|396081473|gb|AFN83090.1| DNA replication factor C subunit [Encephalitozoon romaleae SJ-2008]
Length = 567
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 146/318 (45%), Gaps = 56/318 (17%)
Query: 307 GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV 366
G + K +LL G PG+GKTT+AHV K+ G VVE NASD RS S I +KI V SV
Sbjct: 140 GHTKYKAVLLSGQPGVGKTTMAHVVCKYLGLDVVEFNASDVRSKSEISSKIRSFVNSQSV 199
Query: 367 MA-DSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKG 425
+ +S+ K L++DE+DG D G E++ NV KE
Sbjct: 200 YSRESKKKVLIMDEVDGMSSDRGGIPELV---------------NVIKE----------- 233
Query: 426 CKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSI 485
+ P+ICICND +R+L F +P +++SR+++I + E + S
Sbjct: 234 -----AMIPIICICNDRNNLKIRTLSNHCLDLRFRKPDPRQMLSRIRYIIDKEGKRISDG 288
Query: 486 ALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKR 545
L + + DIR + +Q + +K + I V RK++ ++ FDI E+FQ++
Sbjct: 289 LLNEIIAKSNGDIRYAICMVQSIALRKMVSP--SIAKSFV-RKNVMKNVFDIAGEVFQRK 345
Query: 546 KTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCL 605
++S + D DY +I + ENIL+ + L +C
Sbjct: 346 -------------SISEKIDLYFE------DYSLIPLFVSENILKTPFKSARDL--TECF 384
Query: 606 DCLGNSDLMHQYIMRTQQ 623
D + D++ + I Q
Sbjct: 385 DSISLGDVVEKLIRGADQ 402
>gi|308453587|ref|XP_003089499.1| hypothetical protein CRE_30577 [Caenorhabditis remanei]
gi|308240108|gb|EFO84060.1| hypothetical protein CRE_30577 [Caenorhabditis remanei]
Length = 405
Score = 112 bits (281), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 126/273 (46%), Gaps = 82/273 (30%)
Query: 172 FNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSC 231
F++ L SSE ++ + V LWVDKY +F++LLSD NR +L WLK WD C
Sbjct: 213 FSRMLEESSELETMTT----SHVESSLWVDKYKAKNFSDLLSDNTVNRNILAWLKMWDEC 268
Query: 232 VFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSN 291
VF ++ +++LS+L +K+ + + NG R
Sbjct: 269 VFHRKV----DDLLSSL--------GEKEREVL--------QMDNGKIRR---------- 298
Query: 292 SKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSS 351
P K+LL+ GP GLGK+TLA V A+ GY ++VNASD R+ +
Sbjct: 299 -----------------PLSKMLLISGPAGLGKSTLARVVARQAGYATIDVNASDARTVA 341
Query: 352 TIENKILD--VVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKE 409
+ NK+L+ V ++ AD RP CL++DEIDG ++ I +V + +
Sbjct: 342 DL-NKVLEGAVKTSRTLDADQRPACLILDEIDGT------PIDTIRHLVRCLQATG---- 390
Query: 410 NVAKEDQPEKISKKKGCKKASLLRPVICICNDL 442
K ++ RP+I ICN+L
Sbjct: 391 ------------------KKAVRRPIIGICNNL 405
>gi|403223788|dbj|BAM41918.1| replication factor C [Theileria orientalis strain Shintoku]
Length = 837
Score = 112 bits (281), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 132/529 (24%), Positives = 225/529 (42%), Gaps = 77/529 (14%)
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA 368
PE K+LL+ GP G+GKT L V +HCGY++VE+N+SDDR+ + I VV SV
Sbjct: 250 PENKILLIGGPSGVGKTCLVQVLGRHCGYNIVEINSSDDRTKGRVIPIINGVVSAGSV-D 308
Query: 369 DSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKK 428
RP +++++D G + +I + ++I+ KKG K
Sbjct: 309 PKRPNLCLLEDVDTLHGQ---ELSIITHL--------------------KQINSKKGPKG 345
Query: 429 ASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVV-SRLKHICNNESMKTSSIAL 487
+ RP+IC C D+YA L+ LR+I+KV V I+ + ++ SRL+ I E + L
Sbjct: 346 NFIKRPIICTCTDVYARNLKELREISKV-VMIESCDNVLLKSRLESIMEEEGVFIPEEYL 404
Query: 488 TTLAEYTECDIRSCLNTLQFLDK---KKEILNVMDIGSQV-VGRKDMSRSAFDIWKEIFQ 543
+ E + DIRSCL L+F+ K ++ D+ G + + ++ F+ +I
Sbjct: 405 KEIQETYKDDIRSCLTVLEFISNYSGKHGSFSISDLTKDTNEGVEKLLKTVFN--NDIAS 462
Query: 544 KRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVK 603
K K + L S +SS ++++ S+I G + L ++ HD + K
Sbjct: 463 KEKMETLLLSTTSSIG----YNYVASVI-----------GENATTLPMKRHDH-LWKIAI 506
Query: 604 CLDCLGNSD-LMHQYIMRTQQMPLYVYQPPLAITVHRLVSQ--IQKPNLEWPK--SYQRY 658
D + SD + + Y Q + L ++R V L +P+ S+ Y
Sbjct: 507 FEDIIAQSDAVCNTYASNQQSIQLL---KVCCSFLNRYVCNRTFISHKLTYPQKTSFFGY 563
Query: 659 RNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHIL----------SPPTLRP 708
+ + +I + P I++ + + + ++++ +L + S PTL
Sbjct: 564 NMKYNKSKNIIHTLQKSTTPIIAQGIVSRNFTQETLPFILQFMSNANRALNNQSYPTLLR 623
Query: 709 VALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLS------FD 762
V L L + Y T PL + VS+ +S ++ FD
Sbjct: 624 VIKGTLIVVVIQSLDGCWEGLFPYGSTKLPLSVYPLFHLAQIVVSYGMSIVNVNHHMVFD 683
Query: 763 PPINEFITFKGYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLAD 811
PP+ E + Y + Q+LV+ V+ R G H D
Sbjct: 684 PPVFELYLKTDDQDYFYRIQDKFSQMLVNFVDFYR-----TGNKSHFTD 727
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 155 LTSEPIDVLLQKVEQEAFNK-----ALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFT 209
L SEPID L +++ + ++ + + E ++ WV KY P F+
Sbjct: 159 LISEPIDRLFKRIYKMKHDEYEDEDVFTGRIIKKRKKKRREVSESRKENWVTKYKPEYFS 218
Query: 210 ELLSDEQTNREVLLWLKQW 228
+LL+ E N E L WL W
Sbjct: 219 DLLTRENANLECLRWLSSW 237
>gi|308481115|ref|XP_003102763.1| hypothetical protein CRE_29990 [Caenorhabditis remanei]
gi|308260849|gb|EFP04802.1| hypothetical protein CRE_29990 [Caenorhabditis remanei]
Length = 433
Score = 112 bits (280), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 129/279 (46%), Gaps = 82/279 (29%)
Query: 166 KVEQEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWL 225
K ++ F++ L SSE ++ + V LWVDKY +F++LLSD NR +L WL
Sbjct: 235 KQQELEFSRMLEESSELETMTT----SHVESSLWVDKYKAKNFSDLLSDNTVNRNILAWL 290
Query: 226 KQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNL 285
K WD CVF ++ +++LS+L +K+ + + NG R
Sbjct: 291 KMWDECVFHRKV----DDLLSSL--------GEKEREVL--------QMDNGKIRR---- 326
Query: 286 EYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNAS 345
P K+LL+ GP GLGK+TLA + A+ GY ++VNAS
Sbjct: 327 -----------------------PLSKMLLISGPAGLGKSTLARIVARQAGYATIDVNAS 363
Query: 346 DDRSSSTIENKILD--VVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERK 403
D R+ + + NK+L+ V ++ AD RP CL++DEIDG ++ I +V +
Sbjct: 364 DARTVADL-NKVLEGAVKTSRTLDADQRPACLILDEIDGT------PIDTIRHLVRCLQA 416
Query: 404 SNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDL 442
+ K ++ RP+I ICN+L
Sbjct: 417 TG----------------------KKAVRRPIIGICNNL 433
>gi|389581842|dbj|GAB64563.1| replication factor c [Plasmodium cynomolgi strain B]
Length = 1047
Score = 112 bits (280), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 171/363 (47%), Gaps = 65/363 (17%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS 370
Q++LLL G G GKTTLA+V A H ++V+E+N SDDR+ T+ + +V NS+ S
Sbjct: 267 QRILLLGGSAGKGKTTLAYVIANHFKFNVIEINGSDDRNKETLIPLVESIVCNNSI--GS 324
Query: 371 RPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKAS 430
+P +IDEIDG L + VE ++K ++KK ++
Sbjct: 325 KPNICIIDEIDG-LTSSQQNVEAVMKF----------------------LTKKDRRNRSI 361
Query: 431 LLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTL 490
+ RP+ICICND+Y +L+ LR+I+KV V + + +R+ IC+ E + + ++ L
Sbjct: 362 IRRPIICICNDIYHKSLKELRKISKVVVVDSVNYEMLKARINFICDREGISIGNETVSKL 421
Query: 491 AEYTECDIRSCLNTLQFL--------------------------------DKKKEILNVM 518
E + DIR+ LNT+ FL +K++++ M
Sbjct: 422 VEICKGDIRAILNTICFLSIGGGTSSGSTIGGASGAPVVGPPGDGLHRSHKQKRKVVITM 481
Query: 519 DIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYD 578
D+ + + KD + + ++ I+ K K K++ + + F H +SN +Y
Sbjct: 482 DLLNAYLFYKDANNNYMELLNMIYVKNKNKKIIKQLLHHCH-----QFFHLNLSNEYNYL 536
Query: 579 VIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVH 638
+ +++N++ + ++D K CLD L D + R +Q+ Y Q L V+
Sbjct: 537 QSYYYVYDNLMNVPFNDFDFCKLSYCLDFLTFCDTLE---YRQKQILSYSLQKTLFYAVY 593
Query: 639 RLV 641
+
Sbjct: 594 LFI 596
Score = 49.3 bits (116), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 199 WVDKYAPNSFTELLSDEQTNREVLLWLKQW 228
+V+KY F+ELL+DE NREVLLW+KQW
Sbjct: 206 FVEKYRAKYFSELLTDEAINREVLLWMKQW 235
>gi|449300820|gb|EMC96832.1| hypothetical protein BAUCODRAFT_24529 [Baudoinia compniacensis UAMH
10762]
Length = 1346
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 139/324 (42%), Gaps = 99/324 (30%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LW +KY FT+L+ DE+T+R V+ WLK
Sbjct: 590 LWTEKYRARKFTDLIGDERTHRAVMHWLK------------------------------- 618
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
RW F S +KG + +K P +K+LLL
Sbjct: 619 ---------------RWDQIVFPGSYR---PKQKAKGSTEQSEEK------PHRKILLLT 654
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVI 377
GPPGLGKTTLAHV AK GY V E+NASD+RS++ ++ +I D+V +V + +
Sbjct: 655 GPPGLGKTTLAHVCAKQAGYEVQEINASDERSAAVVKGRIRDMVGTENV------RGVDT 708
Query: 378 DEIDGALGDG---------------------------KGAVEVILKMVSAERKSNTAKEN 410
++DG + K +++I+ R +T ++
Sbjct: 709 KKVDGKVRKAGRPVCVVVDEVDGVVGGSGGGGEGGFVKALIDLIMLDQKNSRGLSTLQQA 768
Query: 411 VAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQI--AKVHVFIQPSVSRVV 468
AK KKKG ++ LLRP+I ICND+Y PALR LRQ A+V + + +
Sbjct: 769 PAK--------KKKG-ERFRLLRPMILICNDVYHPALRPLRQSPHAEVIHVRKAQLQTIS 819
Query: 469 SRLKHICNNESMKTSSIALTTLAE 492
+R++ I + E + + + L E
Sbjct: 820 TRMQAIFDKEGVPCAGDGVRRLCE 843
>gi|126458632|ref|YP_001054910.1| replication factor C large subunit [Pyrobaculum calidifontis JCM
11548]
gi|158513487|sp|A3MS27.1|RFCL_PYRCJ RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|126248353|gb|ABO07444.1| transcriptional regulator, Fis family [Pyrobaculum calidifontis JCM
11548]
Length = 421
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 161/353 (45%), Gaps = 58/353 (16%)
Query: 299 WHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKIL 358
W K+ R E + +LL GPPG+GKTTL H AK GY +VE+NASD R+ I +
Sbjct: 45 WAKR-RDKEIKEARAVLLWGPPGIGKTTLVHALAKEIGYELVELNASDVRTGERIRQVVG 103
Query: 359 DVVQMNSVMADSRPKCLVIDEIDGA-LGDGKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
++ S+ + K ++ DE+DG + + G +E IL ++ TAK
Sbjct: 104 RGLREASLFGYA-GKIVLFDEVDGLHVKEDLGGLEAILNLI------ETAKV-------- 148
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
P++ N+ + P LR LR I+ V + S VV LK IC +
Sbjct: 149 ----------------PIVLTANNPFDPKLRPLRDISLVVGLKRLSEDEVVEVLKRICAS 192
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
E K AL +LA+ + D+R+ +N LQ +++L V DI + G ++ S F+I
Sbjct: 193 EGAKCEEEALRSLAKSSYGDLRAAINDLQLYLAGRKVLTVDDI--KRAGERNPQLSMFEI 250
Query: 538 WKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPV 597
+++ R R +VS + + E F+ +L + + Y D
Sbjct: 251 LDRVYKARWFDEAR-AVSFNPSFDWEQYFVWAL----------------ETIPIVYKDLE 293
Query: 598 MLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQ-KPNL 649
++ + D L +D+ + RTQ+ L Y LA+ VSQ++ KP L
Sbjct: 294 VMS--EAFDRLSKADMFIGIVKRTQEWELLSYAMELALGG---VSQVKNKPRL 341
>gi|303315103|ref|XP_003067559.1| ATPase, AAA family protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240107229|gb|EER25414.1| ATPase, AAA family protein [Coccidioides posadasii C735 delta
SOWgp]
gi|320035672|gb|EFW17613.1| sister chromatid cohesion factor [Coccidioides posadasii str.
Silveira]
gi|392868704|gb|EAS34496.2| sister chromatid cohesion factor [Coccidioides immitis RS]
Length = 958
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 109/433 (25%), Positives = 177/433 (40%), Gaps = 127/433 (29%)
Query: 121 VTAPSGGDRVYVKISSSGVEERVKKLDVRAHSNSLTSEPIDVLLQKVEQEAFNKALNSSS 180
+TAP R Y I + E + + + SE + Q VE A
Sbjct: 152 ITAPGKATRSYYGIEIHQLLEEARTIG----NAGKGSESAPTIHQSVEAPA-------EC 200
Query: 181 EGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRST 240
+G+S+++ LW +KY F +L+ D++T+R VL WLK WDS VF
Sbjct: 201 QGKSEKAA-------NVLWTEKYRARKFKDLIGDDRTHRAVLRWLKGWDSIVF------- 246
Query: 241 SEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWH 300
+++++ QN +++E + I
Sbjct: 247 -----------PNLAKSRTQNKP---------------------VDFEEPTHRKI----- 269
Query: 301 KKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDV 360
TGPP GLGKTTLAHV A GY V+E+NASD+RS ++ +I D
Sbjct: 270 --LLLTGPP-----------GLGKTTLAHVCASQAGYEVLEINASDERSRDVVKGRIKDA 316
Query: 361 VQMNSVMADSRPKCLVIDEIDGALGDGKGA-----------------------VEVILKM 397
V +V + + DG G ++ ++ +
Sbjct: 317 VGTENVKG-------ICVKADGKAIRKPGRPVCVVVDEVDGVVTGSGGGEGGFMKALIDL 369
Query: 398 VSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLR--QIAK 455
V+ ++K++ A + ++ KKKG +K LLRP+I ICND+Y P+LR LR +A+
Sbjct: 370 VALDQKNSKKSPTDATSNNGKR--KKKG-EKFRLLRPLILICNDVYHPSLRPLRTSSVAE 426
Query: 456 VHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEY-----------------TECDI 498
+ Q + +VV R+KH+ E++ A+ + E +E DI
Sbjct: 427 IIHVRQVPLDKVVQRMKHVFEKENISCDGDAVRRICEVSWGLSVKNDRQVKARGISEGDI 486
Query: 499 RSCLNTLQFLDKK 511
R L +++ +K
Sbjct: 487 RGVLVAGEWIARK 499
>gi|119190425|ref|XP_001245819.1| hypothetical protein CIMG_05260 [Coccidioides immitis RS]
Length = 963
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 109/433 (25%), Positives = 177/433 (40%), Gaps = 127/433 (29%)
Query: 121 VTAPSGGDRVYVKISSSGVEERVKKLDVRAHSNSLTSEPIDVLLQKVEQEAFNKALNSSS 180
+TAP R Y I + E + + + SE + Q VE A
Sbjct: 152 ITAPGKATRSYYGIEIHQLLEEARTIG----NAGKGSESAPTIHQSVEAPA-------EC 200
Query: 181 EGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRST 240
+G+S+++ LW +KY F +L+ D++T+R VL WLK WDS VF
Sbjct: 201 QGKSEKAA-------NVLWTEKYRARKFKDLIGDDRTHRAVLRWLKGWDSIVF------- 246
Query: 241 SEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWH 300
+++++ QN +++E + I
Sbjct: 247 -----------PNLAKSRTQNKP---------------------VDFEEPTHRKI----- 269
Query: 301 KKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDV 360
TGPP GLGKTTLAHV A GY V+E+NASD+RS ++ +I D
Sbjct: 270 --LLLTGPP-----------GLGKTTLAHVCASQAGYEVLEINASDERSRDVVKGRIKDA 316
Query: 361 VQMNSVMADSRPKCLVIDEIDGALGDGKGA-----------------------VEVILKM 397
V +V + + DG G ++ ++ +
Sbjct: 317 VGTENVKG-------ICVKADGKAIRKPGRPVCVVVDEVDGVVTGSGGGEGGFMKALIDL 369
Query: 398 VSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLR--QIAK 455
V+ ++K++ A + ++ KKKG +K LLRP+I ICND+Y P+LR LR +A+
Sbjct: 370 VALDQKNSKKSPTDATSNNGKR--KKKG-EKFRLLRPLILICNDVYHPSLRPLRTSSVAE 426
Query: 456 VHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEY-----------------TECDI 498
+ Q + +VV R+KH+ E++ A+ + E +E DI
Sbjct: 427 IIHVRQVPLDKVVQRMKHVFEKENISCDGDAVRRICEVSWGLSVKNDRQVKARGISEGDI 486
Query: 499 RSCLNTLQFLDKK 511
R L +++ +K
Sbjct: 487 RGVLVAGEWIARK 499
>gi|440635814|gb|ELR05733.1| hypothetical protein GMDG_07576 [Geomyces destructans 20631-21]
Length = 1046
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 99/203 (48%), Gaps = 41/203 (20%)
Query: 314 LLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA----- 368
+++ GPPG+GKTT AH+A+K GY V+E NASD RS +E DV+ NS++
Sbjct: 499 IVIYGPPGIGKTTAAHLASKLEGYDVIESNASDTRSKKLVEFGFQDVLNNNSLLGFFAGH 558
Query: 369 ----DSRPK--CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISK 422
DS+ K L++DE+DG +G V + K+
Sbjct: 559 DEPVDSKKKKIVLIMDEVDGMSAGDRGGVGALAKI------------------------- 593
Query: 423 KKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKT 482
CKK + P+I ICN+ P + R + F +P+V +V SR+ IC+ E +K
Sbjct: 594 ---CKKTDI--PIILICNEFRIPKMNPFRHVVAEVPFRRPTVDQVRSRVATICHREGLKL 648
Query: 483 SSIALTTLAEYTECDIRSCLNTL 505
S A+ L E + DIR +N L
Sbjct: 649 SREAMDALIEGSNKDIRQVVNML 671
>gi|341881927|gb|EGT37862.1| hypothetical protein CAEBREN_19839 [Caenorhabditis brenneri]
Length = 429
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 132/292 (45%), Gaps = 85/292 (29%)
Query: 157 SEPIDVLLQ----KVEQEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELL 212
+E I VL + K ++E F++ L+ S D S + V LWV+KY +F++LL
Sbjct: 217 AEDIRVLKEETRVKRQEEEFSRMLDDDSSA-FDTSTSKH--VESALWVNKYEAKNFSDLL 273
Query: 213 SDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGN 272
SD NR +L WLK WD CVF +I +++L +L R+
Sbjct: 274 SDSTVNRNILTWLKMWDECVFRKKI----DDLLGSL----------------GDREREVL 313
Query: 273 RWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAA 332
+ NG R P K+LL+ GP GLGK+TLA + A
Sbjct: 314 QMDNGKIRR---------------------------PAFKMLLISGPAGLGKSTLARIVA 346
Query: 333 KHCGYHVVEVNASDDRSSSTIENKILD--VVQMNSVMADSRPKCLVIDEIDGALGDGKGA 390
+ GY ++VNASD R+ + + NK+L+ V ++ AD RP CL++DEIDG D
Sbjct: 347 RQAGYSTIDVNASDARTVADL-NKVLEGAVKTSRTLDADQRPACLILDEIDGTPID---T 402
Query: 391 VEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDL 442
+ +++ + A K ++ RP+I ICN+L
Sbjct: 403 IRHLIRCLQAN-------------------------GKKAVRRPIIGICNNL 429
>gi|408383245|ref|ZP_11180782.1| replication factor C large subunit [Methanobacterium formicicum DSM
3637]
gi|407814027|gb|EKF84665.1| replication factor C large subunit [Methanobacterium formicicum DSM
3637]
Length = 505
Score = 110 bits (275), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 125/249 (50%), Gaps = 35/249 (14%)
Query: 307 GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV 366
G P QK LLL GPPG GKTTLAH+ A+ H+ E+NASD RS I N I + S+
Sbjct: 35 GEP-QKCLLLVGPPGTGKTTLAHLVAREFSDHI-ELNASDKRSYDIIMNTIGEASASVSL 92
Query: 367 MADSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKG 425
K +++DE+DG G + +G + I K++ K+G
Sbjct: 93 FGQGGRKLIILDEVDGLHGNEDRGGIRAINKII------------------------KEG 128
Query: 426 CKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSI 485
P+I + NDLY+ ++SL+ ++ + + +V+ LK IC E +
Sbjct: 129 H------HPMIMMANDLYSKRIQSLKSKCQLIKIRKVHTNSIVALLKKICIKEGVDFEEH 182
Query: 486 ALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKR 545
L TLA+ + D+RS +N LQ + + K+ + D+ +V+ KD + FD + + + +
Sbjct: 183 VLRTLAKRSRGDLRSAINDLQVIAQGKDSITSDDL--KVISEKDDINNIFDSVRTVLKSK 240
Query: 546 KTKRLRNSV 554
KR+++S+
Sbjct: 241 NPKRIKDSL 249
>gi|406865654|gb|EKD18695.1| ATPase [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 1082
Score = 110 bits (275), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 147/316 (46%), Gaps = 81/316 (25%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
+W +KY SF EL+ D++T+R+VL WLK
Sbjct: 336 MWTEKYRARSFMELVGDDRTHRQVLKWLKA------------------------------ 365
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
W F + + + G QD K R K+LLL
Sbjct: 366 ----------------WDPLVFPKAGKTKAAVPSKPGFQDD-EKAHR-------KILLLT 401
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS------- 370
GPPGLGKTTLAHV A+ GY V+E+NASD+RSS+ ++N+I V SV S
Sbjct: 402 GPPGLGKTTLAHVCARQAGYEVMEINASDERSSNVVKNRIRTSVGTESVKTGSTITSKSG 461
Query: 371 ------RPKCLVIDEIDGALGDGKGA-----VEVILKMVSAERK-SNTAKENVAKEDQPE 418
P C+V+DE+DG +G G+ ++ ++ ++ ++K + T +N+ + +
Sbjct: 462 HVQKVAHPLCVVVDEVDGVVGGSGGSGEGGFIKALIDLIQLDQKNTTTVNQNLGYTKKKK 521
Query: 419 KISKKKGCKKASLLRPVICICNDLYAPALRSLRQ--IAKVHVFIQPSVSRVVSRLKHICN 476
K K L+RP+I ICND+Y P+LR +RQ A++ +P + VV+R+K + +
Sbjct: 522 KGDDFK------LMRPIILICNDVYHPSLRPIRQSSFAEIIHVRKPPLDAVVARMKSVFD 575
Query: 477 NESMKTSSIALTTLAE 492
E + + + L E
Sbjct: 576 KEGVPCDNDGVRRLCE 591
>gi|344230558|gb|EGV62443.1| P-loop containing nucleoside triphosphate hydrolase protein
[Candida tenuis ATCC 10573]
Length = 791
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 139/285 (48%), Gaps = 52/285 (18%)
Query: 305 STGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSS-------------- 350
S G P +K LL+ GP G+GKT AH+ AK GY+V E+NA++ +S
Sbjct: 167 SLGRPMRKFLLISGPSGIGKTAAAHIIAKQLGYNVEELNAANSMNSLPNSNSSGNNYTNV 226
Query: 351 -STIENKILDVVQMNSVMA-------DSRPKCLVIDEIDGALGDGKGAVEVILKMVSAER 402
++++ KI + + NS+ + +S+P CL+IDEID A G I+++++
Sbjct: 227 VNSLKLKIQNALTSNSIQSKGNKISTNSKPTCLIIDEIDTA-----GNSSDIIRVLNEIH 281
Query: 403 KSNTAKENVAKEDQPEKISKKKGCKKASLL-RPVICICNDLYAPALRS--------LRQI 453
+S+ N S K +K LL RP+ICI ND + + R+ LR +
Sbjct: 282 QSDQRAFNQLNNKNVFGNSNSKSKRKDQLLNRPIICIANDAFTTSSRTYGGFNMDKLRNM 341
Query: 454 AKVHVFIQPSVSR--------------VVSRLKHICNNESMKTSSIALTTLAEYTECDIR 499
+++ F +P++ + V +K I + E++K + + E E DIR
Sbjct: 342 SELVTFQKPTIQKTNSGMKIGGKALKSVKEYIKWISDKENLKLGFQEIGEIVEICEGDIR 401
Query: 500 SCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQK 544
+C+N LQF +K ++ M G+ KD+ S F I + IF++
Sbjct: 402 ACINHLQFNGRKVQV--PMIEGAHNKSTKDLQLSWFKIAEMIFKR 444
>gi|255078488|ref|XP_002502824.1| predicted protein [Micromonas sp. RCC299]
gi|226518090|gb|ACO64082.1| predicted protein [Micromonas sp. RCC299]
Length = 917
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 146/336 (43%), Gaps = 65/336 (19%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSST----------IENKILDVV 361
K +L+ G PG+GK++ A + AK G+ VVEVNASD R +S N I ++V
Sbjct: 387 KSVLISGAPGVGKSSAATIIAKQLGFEVVEVNASDTRGASGKDVKEGVGGKASNAIREMV 446
Query: 362 QMNSV-MADSRPK--CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPE 418
+V +PK CL++DE+DG G +G V+ ++ +
Sbjct: 447 TNRAVNFFTGKPKKMCLIMDEVDGMSGGDRGGVQELIACI-------------------- 486
Query: 419 KISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNE 478
KISK P+ICICND Y L+SL+ F++P+ +++ R+ I +E
Sbjct: 487 KISK----------IPIICICNDKYNQKLKSLQNYTMDLPFVKPTKVQILKRMLKIAQDE 536
Query: 479 SMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIW 538
+ S A+ L E DIR +N LQ K+ D+ S + +KD+ F
Sbjct: 537 GITMSEAAMEALIETCSNDIRQIINQLQMRRLTKQTFEFDDVKS--LAKKDLDMGPFTA- 593
Query: 539 KEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQ----YH 594
+L N + V+ + + D D+I + EN LQ + +
Sbjct: 594 --------MDKLTNRDAGLLTVTERLNLVFQ------DSDLIPLFVQENYLQYRPFAARN 639
Query: 595 DPVMLKTV-KCLDCLGNSDLMHQYIMRTQQMPLYVY 629
D L+ V C+ + D+M++ + Q L Y
Sbjct: 640 DAERLQIVANAATCISHGDIMNRSVRMKQNWGLMPY 675
>gi|116205063|ref|XP_001228342.1| hypothetical protein CHGG_10415 [Chaetomium globosum CBS 148.51]
gi|88176543|gb|EAQ84011.1| hypothetical protein CHGG_10415 [Chaetomium globosum CBS 148.51]
Length = 1060
Score = 109 bits (272), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 105/231 (45%), Gaps = 48/231 (20%)
Query: 293 KGIQDSW-------HKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNAS 345
+G D W +K + G + +++ GPPG+GKTT AH+AAK GY V+E NAS
Sbjct: 480 QGWLDKWAMHRKYNFQKRGADGMGGYRAIIISGPPGIGKTTAAHLAAKLAGYDVLESNAS 539
Query: 346 DDRSSSTIENKILDVVQMNSVM-----------ADSRPKCLVIDEIDGALGDGKGAVEVI 394
D RS +EN + DV+ S+M A + LV+DE+DG +G V +
Sbjct: 540 DTRSKKLVENGVSDVLNNTSLMGYFAADGKQIDAGKKKIVLVMDEVDGMSAGDRGGVGAL 599
Query: 395 LKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIA 454
K CKK + P+I ICN+ P ++ +A
Sbjct: 600 AKF----------------------------CKKTEV--PLILICNERRLPKMKPFDHVA 629
Query: 455 KVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
F +P+V ++ SR+ IC+ E +K + L E + DIR +N L
Sbjct: 630 FDVKFQRPTVDQIRSRIMTICHREGLKMPPQVINALIEGSGKDIRQIINML 680
>gi|343477664|emb|CCD11568.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 1068
Score = 109 bits (272), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 130/295 (44%), Gaps = 99/295 (33%)
Query: 308 PPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVV------ 361
PP+ ++ +L GPPG+GKTTLAHV A HCGY +E+NAS DR++S IEN I +
Sbjct: 307 PPDDRLAILIGPPGVGKTTLAHVLAMHCGYEPLEINASVDRTASKIENAIQLAIAPGGGR 366
Query: 362 --QMNSVMADSR----------------------------------PKCLVIDEIDGALG 385
+ S+ A S P+CL+IDE+DGA
Sbjct: 367 RRKQRSISATSSSRAVTGDAGAAASGGNSGKNPAAPKSSLTDMLMVPRCLIIDEVDGA-- 424
Query: 386 DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAP 445
++ + K+D + RPV+C+CN+
Sbjct: 425 ------------------TDNVAAFLLKQD---------------IHRPVLCLCNE-KNQ 450
Query: 446 ALRSLRQIAKVHVFIQP-SVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNT 504
A+R L + + ++I P R++SRL+ I E +K L L + D+R CLNT
Sbjct: 451 AVRQLLKRCGMVLYIDPIRPQRLLSRLREITELEGIKVDDAILADLVRSSNGDVRCCLNT 510
Query: 505 LQFL-------------DKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRK 546
LQF ++++E+L+ G+ V KD S D W +F++R+
Sbjct: 511 LQFAYQQILTSGAQHSHNQQQELLH----GALV---KDTKLSPRDTWLTVFERRE 558
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 26/39 (66%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSE 236
LW KY+P F +LLSD+ TN ++L W+K WD VF E
Sbjct: 256 LWSMKYSPQRFRDLLSDDATNLKLLRWMKSWDEYVFREE 294
>gi|354545044|emb|CCE41769.1| hypothetical protein CPAR2_803200 [Candida parapsilosis]
Length = 799
Score = 109 bits (272), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 197/882 (22%), Positives = 351/882 (39%), Gaps = 212/882 (24%)
Query: 128 DRVYVKISSSGV--EERVKKLDVRAHSNSLTSEPIDV--LLQKVEQEAFNKALNSSSEGQ 183
DR VK+ S ER +++ +AH+ ++ +D+ L KVE + NK ++SS+ +
Sbjct: 67 DRKEVKLFSGQFINLERRQRIGPQAHTLETSNLYMDMDSLFAKVELK--NKIKDNSSKLE 124
Query: 184 SDRSLPEKPVVHEQLWVDKYAPNSFTELL--SDEQTNREVLLWLKQWDSCVFGSEIRSTS 241
S + P P LW +KY P +F +L +E+ R ++ WL++W VFG ++ T
Sbjct: 125 SKKKHPTTPKSMS-LWTEKYKPQNFLQLCPAGNERQYRTIMRWLQKWSPMVFGERVKET- 182
Query: 242 EEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHK 301
S R NR K
Sbjct: 183 ------------------DGTDSLGRPNR------------------------------K 194
Query: 302 KTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASD--------------- 346
GPP G+GKT H+ + GY+V E+NA +
Sbjct: 195 ILLIHGPP-----------GVGKTVATHILVRQMGYNVQELNAMNSMDTLPQGSANSSTG 243
Query: 347 ----DRSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAER 402
+S+ ++ KI + + N+V + +P CL+IDE+D +L + V+++ +++A++
Sbjct: 244 SNAYSNASNALKLKIQNTLTSNAVSRNGKPFCLLIDELD-SLANTNDVVKILQDIINADQ 302
Query: 403 KSNTAKENVAKEDQPEKISKKKGCKKASLL-RPVICICNDLYAPA--------LRSLRQI 453
++ + ++ V D KK K LL RP+ICI ND+Y+ L +R I
Sbjct: 303 RAYSKQKYVDNNDA------KKSKKGDRLLNRPIICIANDIYSRQSGKFGPNPLEKMRAI 356
Query: 454 AKVHVFIQPSVSR--------------VVSRLKHICNNESMKTSSIALTTLAEYTECDIR 499
+ V F +P++++ V L + E M + + E + D+R
Sbjct: 357 SDVVTFRKPAIAQRATGAKVSGSAMKSVKDFLMSVSQREKMGLDYRDIGEICEVCDGDLR 416
Query: 500 SCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSN 559
+CLN +QF K+ + + M++ V D S F + +++F R+ +L+ + +
Sbjct: 417 ACLNQMQFSGKR--VASSMNVKKSAV---DKHMSWFTMVEDVF--RRDPQLKKEDNFNVL 469
Query: 560 VSNEFDFLHSLISNRGDY-DVIFDGIHENILQLQY-HDPVMLKTVKCLDCLGNSDLMHQY 617
+ D I+ D D +G+ L + + D + + + D L D +
Sbjct: 470 LQKYMDGHGKSITGSSDLVDKFINGVFNKYLDVVHLQDDTLTRPGEFSDWLHYHDSFNNN 529
Query: 618 IMRTQQMPLYVYQPPLAITVHRLVSQIQK--------PNLEWPKSYQRYRNAFMEKMDIF 669
Q Y +A+ L S ++ PN++ S++ + E I
Sbjct: 530 FNDANQ-----YNALIALKSWTLFSDLKTFRDINSLIPNVK-NLSFETFE-KLKENRHIV 582
Query: 670 KSWHSKIPPYISRHL---STESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLV 726
K+ S IP + L +T + + L ILSP + +L SA E L ++V
Sbjct: 583 KTLISSIPASLRLALGSTNTHHIACYFLPCLTKILSPSLSSKMKSNLTSA-EVTKLEKVV 641
Query: 727 SAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLALAVK 786
+ M ++LT + TK D + D +LS F TF RS+ A+ +K
Sbjct: 642 TLMDIFNLTLE-TKKDFETGQVDLHFGPDWDSLS------HFDTFVASRSS----AMELK 690
Query: 787 QVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTNNAAVSAKLIEKSK 846
Q+ ++++Q + + +SA+L ++
Sbjct: 691 QL---QLKRQLLFPL-----------------------------------ISAELENQAT 712
Query: 847 SLP-YSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDRFRKLSGKVS 905
S P R+ + + R ST K +G T KS ++ ++ V
Sbjct: 713 STPNLKRKSAAVAADADDDDGAGRDSTKRAKTARNGQTFKS---------QYDDVNSTVK 763
Query: 906 QDNDNAVQKATVERDSLPLLFKFNEGFTNAVKRPVRMRDFLL 947
DN+ Q V R + FNEG++NAV++ + +D L
Sbjct: 764 SDNEVIKQ---VPR----IWVNFNEGYSNAVRKEITWKDIWL 798
>gi|352683022|ref|YP_004893546.1| replication factor C, large subunit [Thermoproteus tenax Kra 1]
gi|350275821|emb|CCC82468.1| replication factor C, large subunit [Thermoproteus tenax Kra 1]
Length = 423
Score = 109 bits (272), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 156/349 (44%), Gaps = 57/349 (16%)
Query: 310 EQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMAD 369
E + +LL GPPG+GKTTL H A Y ++E+NASD R+S+ I+ + ++ S+
Sbjct: 54 EARSILLAGPPGVGKTTLVHALANEINYELIELNASDVRTSARIKEVVGRGLREGSLFGY 113
Query: 370 SRPKCLVIDEIDGA-LGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKK 428
S + ++ DE+DG + G ++ I+ M+ R
Sbjct: 114 S-GRIVLFDEVDGLNPKEDLGGLDSIVDMIETARV------------------------- 147
Query: 429 ASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALT 488
P+I N+ Y LR LR+I+ V + VV L+ IC+ E +K AL
Sbjct: 148 -----PIIMTANNPYDQRLRPLREISYVVNLKKLDEEDVVEVLRRICSTEKIKCEEDALR 202
Query: 489 TLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTK 548
LA + D+R+ +N LQ + K +L + DI + +G ++ S F++ ++F+
Sbjct: 203 ALARSSNGDLRAAINDLQLFAEGKGVLTIDDI--RRIGERNPQLSMFEVLDKVFR----- 255
Query: 549 RLRNSVSSSSNVSNEFDFLHSL-ISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDC 607
+N FD ++ S D++ F EN+ ++ Y DP + LD
Sbjct: 256 ------------ANWFDEARAISFSPSFDWEQFFAWAAENVPRV-YKDPHV--AAAALDR 300
Query: 608 LGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQ 656
L +D++ +I RT + L Y L + LV KP L YQ
Sbjct: 301 LSKADIILSHIKRTGEWELMPYMTELMLAGVALVP--GKPRLPRFFKYQ 347
>gi|169620369|ref|XP_001803596.1| hypothetical protein SNOG_13386 [Phaeosphaeria nodorum SN15]
gi|160704018|gb|EAT79270.2| hypothetical protein SNOG_13386 [Phaeosphaeria nodorum SN15]
Length = 1073
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 120/241 (49%), Gaps = 28/241 (11%)
Query: 309 PEQ--KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVV----- 361
P+Q K+LLL GPPGLGKTTLAHV A+ GY V E+NASD+RS ++ +I D+V
Sbjct: 395 PQQHRKILLLTGPPGLGKTTLAHVCARQAGYEVQEINASDERSRDVVKGRIRDMVGTENV 454
Query: 362 -QMNSVMADSRPK-----------CLVIDEIDGALGDGKGAVEVILKMVSA-ERKSNTAK 408
+N+ A+ + + + G V+ ++ +++ E+ S
Sbjct: 455 RGVNTTTANGKVRKAGKPVCVVVDEVDGVVGGAGGAGEGGFVKALIDLINLDEKNSKMVG 514
Query: 409 ENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQ--IAKVHVFIQPSVSR 466
++ + KKK + LLRP+I ICNDLY P+LR LRQ +A++ QP+++
Sbjct: 515 QSTTGTN------KKKKGDRFRLLRPLILICNDLYHPSLRPLRQSSMAEIVRIRQPALNM 568
Query: 467 VVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVG 526
VVSR++ I E ++ S + L E T + +I VM + V G
Sbjct: 569 VVSRMQDIFTKEGIQCDSDGVRRLCEATWGVSTKKEGGTGSGTGEGDIRGVMVVSEWVAG 628
Query: 527 R 527
R
Sbjct: 629 R 629
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 9/57 (15%)
Query: 182 GQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIR 238
G+S R+L +W +KY FT+L+ DE+T+R VL WLK WD VF ++
Sbjct: 335 GKSSRTL---------MWTEKYRAKKFTDLVGDERTHRSVLRWLKAWDPIVFPGSVK 382
>gi|171689552|ref|XP_001909716.1| hypothetical protein [Podospora anserina S mat+]
gi|170944738|emb|CAP70849.1| unnamed protein product [Podospora anserina S mat+]
Length = 912
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 101/205 (49%), Gaps = 41/205 (20%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM---- 367
+ +++ GPPG+GKTT AH+AAK GY V+E NASD RS +EN +++VV S++
Sbjct: 460 RAVIISGPPGIGKTTSAHLAAKLEGYDVIESNASDSRSKKLVENGVMEVVNNTSLLGYFA 519
Query: 368 -----ADSRPK--CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
AD+ K LV+DE+DG +G V + K+
Sbjct: 520 GDGKTADAAKKKIVLVMDEVDGMSAGDRGGVGALAKL----------------------- 556
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
CKK + P+I ICND P ++ +A F +P+V ++ SR+ IC+ E +
Sbjct: 557 -----CKKTEV--PMILICNDRRLPKMKPFDHVAFDIKFQRPTVDQIRSRVMTICHREGL 609
Query: 481 KTSSIALTTLAEYTECDIRSCLNTL 505
K + L E + DIR +N L
Sbjct: 610 KMPLPVVNALIEGSGKDIRQIINML 634
>gi|212537065|ref|XP_002148688.1| sister chromatid cohesion factor (Chl12), putative [Talaromyces
marneffei ATCC 18224]
gi|210068430|gb|EEA22521.1| sister chromatid cohesion factor (Chl12), putative [Talaromyces
marneffei ATCC 18224]
Length = 1133
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 180/748 (24%), Positives = 304/748 (40%), Gaps = 175/748 (23%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS 370
+K+L+L GPPGLGKTTLAHV A+ GY V+E+NASD+R+ ++ +I D V +V + S
Sbjct: 446 RKILMLTGPPGLGKTTLAHVCAQQAGYEVLEINASDERNRDIVKGRIRDAVGTENVKSIS 505
Query: 371 ------------RPKCLVIDEIDGALGDGKGA-----VEVILKMVSAERKSNTAKENVAK 413
RP C+V+DE+DG +G ++ ++ +V ++K+ A+ N
Sbjct: 506 AGTDSTKSSRSGRPVCVVVDEVDGVVGGAGSGGEGGFIKALIDLVMTDQKNAAARPN--- 562
Query: 414 EDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLR--QIAKV-HVFIQPSVSRVVSR 470
Q KK+ LLRP+I ICND Y +LR LR +A+V HV P + + R
Sbjct: 563 --QNSFSGKKRKGDNFRLLRPIILICNDAYHSSLRPLRTANVAEVIHVRHVP-MENAIQR 619
Query: 471 LKHICNNESMKTSSIALTTLAE-----------------YTECDIRSCLNTLQFLDKK-- 511
LK I E+++ + + L E +E DIRS L + +++ +K
Sbjct: 620 LKLILTKENIQFDADGVRRLCEASWGMSAKKDRTEKNRGVSEGDIRSILVSAEWVARKLR 679
Query: 512 ---------------KEILNVMDIGS---------QVVGRKDMSRSAF-------DIWKE 540
+ ILN + GS ++ R + + F + + +
Sbjct: 680 AESAATPRLTKSWLEENILNDPESGSRGLGRGGVREITDRVFIEGAGFPAAPVGANAFSD 739
Query: 541 IFQKRKTK------RLRNSVSSSSNVSNEFDFLHSLISNRGDYD-VIFDGIHENILQLQY 593
F + +TK LR +SS L +I G+YD D E +
Sbjct: 740 PFDQERTKTPVGVAELRRRHASSK--------LREMIDASGEYDRCATDCFIEYPTRTYQ 791
Query: 594 HDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVS----------- 642
D + K D L D++ I Q L Y + H L +
Sbjct: 792 DDTFLSKPNAAYDWLHFHDMISSKIYSNQDWELNPYMSQSTLAFHHLFAGNGGSSNKRKF 851
Query: 643 -QIQKPNLEWPKSYQRYRNAFMEKMDIFKS----WHSKI-PPYISRHLSTESLVEDSISP 696
+ E P S R A E M KS + S P + S +S+ D +
Sbjct: 852 DDDKNEEEEHPFSGPRADFAAFEAMKQNKSLLVGFQSTFSAPLLRLFRSVDSIAMDLVPN 911
Query: 697 LLHILSPPTLRPVALH------LLSAKEKNDLAQLVSA---MVSYSLTYKNTKSDPLLNN 747
L+ +LS P +RPV + + S +++++ A + +A M +++T++ +
Sbjct: 912 LMRMLS-PDVRPVIVRGSEQTSIASVRKESERALVRAAVRVMSGFNVTFEKIR------- 963
Query: 748 LGNEVSHDVSTLSFDPPINEFITFKGYR------SNHYVLALAVKQVLVHEVEKQRIMQV 801
+GNE +H +PPI+ + F + + + A++QVL E K+ + +
Sbjct: 964 IGNEGAHAGWAYRMEPPIDTLVGFSKTKGTILDTGSSAPVRYAIRQVLDQEYRKETMRK- 1022
Query: 802 TIGKSEHLADGYKENMDLAGEEDSKTESAKTNNAAVSAKLIEKSKSLP---YSRQCNPST 858
+ E L L+ + S K N+ + KL + + + R
Sbjct: 1023 ---QGEALLGLPGPGSQLSKNKQSNYGDDKENSNSSRPKLSPDAAGVKRDFFGR------ 1073
Query: 859 STVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDRFRKLSGKVSQDNDNAVQKATVE 918
++ +S+ ST S K + G + SS + DR
Sbjct: 1074 --IICNNESAPPSTTSNKARQPGQKRN---SSGNEHDR---------------------- 1106
Query: 919 RDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
+ F+EGF+NAV++P+ + + L
Sbjct: 1107 ----KVWVTFHEGFSNAVRKPITIAELL 1130
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 24/36 (66%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVF 233
+W +KY F EL+ DE+T+R VL WLK WD VF
Sbjct: 391 MWTEKYRARRFAELIGDERTHRSVLRWLKGWDHIVF 426
>gi|302853225|ref|XP_002958129.1| DNA replication factor C complex subunit 1 [Volvox carteri f.
nagariensis]
gi|300256597|gb|EFJ40860.1| DNA replication factor C complex subunit 1 [Volvox carteri f.
nagariensis]
Length = 963
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 128/295 (43%), Gaps = 61/295 (20%)
Query: 280 RNSNNLEYEN---SNSKGIQDSWHK-KTRSTGPP------------EQKVLLLCGPPGLG 323
RNS+ L N +N K +SW + R P +K LL GPPG+G
Sbjct: 374 RNSSELVGNNTLVANLKQWLESWEQVHLRGAAAPTAKGGGSKPKDLSKKAALLSGPPGIG 433
Query: 324 KTTLAHVAAKHCGYHVVEVNASDDRSSST-----IENKILDVVQ----------MNSVMA 368
KT+ AH+ A+ G+ VVE+NASD R+ ST I K +V++ +
Sbjct: 434 KTSAAHIIAREAGFEVVEMNASDTRNKSTKVSDGIAGKQSNVIKEMVSNTTLPGLGDAGG 493
Query: 369 DSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKK 428
R + L++DE+DG G +G ++ ++ + K+
Sbjct: 494 KHRKQLLIMDEVDGMSGGDRGGIQDLIDTI----------------------------KR 525
Query: 429 ASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALT 488
+ + P+ICICND Y LRSLR F +P+V ++ R+ IC E ++ + +
Sbjct: 526 SKI--PIICICNDKYNQKLRSLRNHCMELEFRKPTVQQISKRMSEICQKEGLQINQATMD 583
Query: 489 TLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQ 543
L D+R L LQ + + L ++ ++ KD S F+ + + +
Sbjct: 584 ALVSGAGGDLRLILGQLQMVRLRARALTYDEVRGKMGTSKDTDMSPFECARRLLE 638
>gi|320100774|ref|YP_004176366.1| replication factor C large subunit [Desulfurococcus mucosus DSM
2162]
gi|319753126|gb|ADV64884.1| replication factor C large subunit [Desulfurococcus mucosus DSM
2162]
Length = 425
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 164/371 (44%), Gaps = 83/371 (22%)
Query: 297 DSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENK 356
+SW K G P +K LL GPPG GKT+L A+ GY + E+NASD R I ++
Sbjct: 35 ESWEK-----GVPGKKAALLHGPPGCGKTSLVEAVARSKGYQLFEMNASDARRKEDI-DR 88
Query: 357 ILDVVQMNSVMADSRPKCLVIDEIDGA--LGDGKGAVEVILKMVSAERKSNTAKENVAKE 414
I+ + + + SR K +++DE+DG D G +E +++++ A TA
Sbjct: 89 IVKLASRSGALTGSR-KIILLDEVDGMDPRADA-GGIEALVEVIKA-----TAN------ 135
Query: 415 DQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHI 474
P+I N+ Y+ ALR LR++++V F + S S VV LK I
Sbjct: 136 -------------------PIIMTANNPYSQALRPLRELSEVIGFKRLSESVVVKVLKKI 176
Query: 475 CNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSR-- 532
C E + AL +A +E D+RS +N L E L + G V K++S
Sbjct: 177 CGAEKLFCEDEALREIARRSEGDLRSAINDL-------EALAGLSGGVTVNAVKELSTYR 229
Query: 533 ----SAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENI 588
+ ++ +++F R + + +S+ +EF +I+ I+E+I
Sbjct: 230 NRVYAPYEALQKLFNARYIFQAKEYATSTDLAPDEF--------------IIW--INEHI 273
Query: 589 LQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPN 648
Y DP + + D L +D+ I+RTQ L Y V ++ P
Sbjct: 274 -PTYYEDPE--EVARAYDALSRADVYMGRIVRTQNWDLLSY-----------VLEMMGPG 319
Query: 649 LEWPKSYQRYR 659
+ + + RYR
Sbjct: 320 VAFARKTYRYR 330
>gi|147781728|emb|CAN69744.1| hypothetical protein VITISV_016317 [Vitis vinifera]
Length = 186
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 101/179 (56%), Gaps = 21/179 (11%)
Query: 3 MDMDMHIPLPEELELLEAN---YQDLDPPEQDPDPPEPVPPD-----------SLPLEIN 48
MD +M+IPLPEELE LEAN +QDL+ E P + S P ++N
Sbjct: 1 MDANMYIPLPEELEWLEANSHLHQDLEDYEDQEPPEPYPEEEEEQLPEPPSPLSQP-QVN 59
Query: 49 GHKRPRSDTPKSPIDVDEPQFDEKRSRIVDNDDEDWLRYSPPPPQARD-DARVEVEEKFV 107
G KRP SD P +P + D + +EDWLRYS P D + V EE+
Sbjct: 60 GQKRPLSDGPDAPDSXKRSKADLSET----GAEEDWLRYSLPQDSDGDLEPMVVDEERIX 115
Query: 108 SRYASEIDGDCLPVTAPSGGDRVYVKISSSGVEERVKKLDVRAHSNSLTSEPIDVLLQK 166
SRYASEIDGDC+PVT P GGDRVY+KIS++G + R+KKLD+ + +S + V L +
Sbjct: 116 SRYASEIDGDCIPVTGP-GGDRVYLKISATGSDGRLKKLDLEGRTKGESSFVVAVWLPR 173
>gi|305663892|ref|YP_003860180.1| AAA ATPase [Ignisphaera aggregans DSM 17230]
gi|304378461|gb|ADM28300.1| AAA ATPase central domain protein [Ignisphaera aggregans DSM 17230]
Length = 480
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 187/432 (43%), Gaps = 68/432 (15%)
Query: 310 EQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMAD 369
++K LLL GPPG GKT+L A Y ++E+NASD R S IE + M S+
Sbjct: 43 QRKALLLYGPPGCGKTSLVEAIANEFKYELIEMNASDFRRRSDIERIAIRASSMQSIFGK 102
Query: 370 SRPKCLVIDEIDG-ALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKK 428
+R K +++DE+DG + + +G +E I ++V EK S
Sbjct: 103 TR-KIILLDEVDGISAKEDEGGIEAIKQLV-------------------EKTSV------ 136
Query: 429 ASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALT 488
PVI N+ Y P+LR LR+IA++ F + S S + L IC E+++ A+
Sbjct: 137 -----PVIMTANNPYDPSLRVLREIAEMVQFKKLSKSDMRMVLNKICRAENLRCDEEAID 191
Query: 489 TLAEYTECDIRSCLNTLQFLDKK-KEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKT 547
+ E E D+R+ +N LQ + + E+ +D ++ +D + F+ + IF
Sbjct: 192 YIIERAEGDLRAAINDLQAVGEGFGEV--TLDRAKILLRPRDKEKDPFETLRAIFSS--- 246
Query: 548 KRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDC 607
N + V+N+ D++ + + ENI +QY D + + D
Sbjct: 247 ----NYAWQARAVTNQTQL---------DHEQLKLWLEENI-PIQYTD--IEDMARAFDM 290
Query: 608 LGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQ-KPNLEWPKSYQRYRNAFMEKM 666
L +D+ I+RT L VY L L ++ K W K R M K+
Sbjct: 291 LSKADVYLGRIVRTGDWDLLVYAIDLMTAGIALSAKNNVKDKYRWNKYNFPRRIQLMSKL 350
Query: 667 DIFKSWHSKIPPYISR--HLSTESLVEDSISPLLHI--LSPPTLRPVALHL--------- 713
+ I ++ H+S+ + + D I L I +SP +AL L
Sbjct: 351 KDVRDLRDDIAKLLATTLHISSATAINDVIPFLRAIFQVSPGYGAKIALGLGLSEKMIEF 410
Query: 714 LSAKEKNDLAQL 725
L+ K+D+ Q+
Sbjct: 411 LAGASKSDVLQM 422
>gi|350289217|gb|EGZ70442.1| DNA replication factor C, large subunit [Neurospora tetrasperma
FGSC 2509]
Length = 1090
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 104/216 (48%), Gaps = 41/216 (18%)
Query: 301 KKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDV 360
+K + G + +++ GPPG+GKTT AH+AAK GY V+E NASD RS IEN + +V
Sbjct: 526 QKRGADGSGGYRAIIISGPPGIGKTTAAHLAAKMEGYDVIESNASDTRSKKLIENGVSEV 585
Query: 361 VQMNSVM---------ADSRPK--CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKE 409
+ S++ AD+R K LV+DE+DG +G V + K
Sbjct: 586 MTNTSLLGFFGGDGKHADARKKKIVLVMDEVDGMSAGDRGGVGTMAKF------------ 633
Query: 410 NVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVS 469
CKK + P+I ICN+ P ++ +A F +P+V ++ S
Sbjct: 634 ----------------CKKTEV--PLILICNERRLPKMKPFDHVAFDIKFQRPTVDQIRS 675
Query: 470 RLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
R+ IC+ E +K + L E + DIR +N +
Sbjct: 676 RIMTICHREGLKIPPPVVNALIEGSGRDIRQIINMI 711
>gi|449445013|ref|XP_004140268.1| PREDICTED: replication factor C subunit 1-like [Cucumis sativus]
Length = 981
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 125/259 (48%), Gaps = 50/259 (19%)
Query: 301 KKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIE------ 354
KK +G +K +LLCG PG+GKTT A + ++ G+ +EVNASD+R S +
Sbjct: 395 KKASDSGA--KKAVLLCGGPGIGKTTSAKLVSQMLGFEAIEVNASDNRGKSDAKIQKGIG 452
Query: 355 ----NKILDVVQMNSV-MADSRPK----CLVIDEIDG-ALGDGKGAVEVILKMVSAERKS 404
N I +++ S+ ++PK L++DE+DG + GD G ++I +
Sbjct: 453 GSNANSIKELISNESLHFKMNQPKHHKTVLIMDEVDGMSAGDRGGVADLIASI------- 505
Query: 405 NTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSV 464
K+SK P+ICICND Y+ L+SL + F +P+
Sbjct: 506 --------------KMSK----------IPIICICNDRYSQKLKSLVNYCLILSFRKPTK 541
Query: 465 SRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV 524
++ RL + N E ++ + IAL LAE D+R LN LQ+L ++ DI ++
Sbjct: 542 QQMAKRLVQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYDDIRQRL 601
Query: 525 V-GRKDMSRSAFDIWKEIF 542
+ +KD S F ++F
Sbjct: 602 LSSKKDEDISPFTAVDKLF 620
>gi|449481177|ref|XP_004156105.1| PREDICTED: replication factor C subunit 1-like [Cucumis sativus]
Length = 942
Score = 107 bits (268), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 125/259 (48%), Gaps = 50/259 (19%)
Query: 301 KKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIE------ 354
KK +G +K +LLCG PG+GKTT A + ++ G+ +EVNASD+R S +
Sbjct: 369 KKASDSGA--KKAVLLCGGPGIGKTTSAKLVSQMLGFEAIEVNASDNRGKSDAKIQKGIG 426
Query: 355 ----NKILDVVQMNSV-MADSRPK----CLVIDEIDG-ALGDGKGAVEVILKMVSAERKS 404
N I +++ S+ ++PK L++DE+DG + GD G ++I +
Sbjct: 427 GSNANSIKELISNESLHFKMNQPKHHKTVLIMDEVDGMSAGDRGGVADLIASI------- 479
Query: 405 NTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSV 464
K+SK P+ICICND Y+ L+SL + F +P+
Sbjct: 480 --------------KMSK----------IPIICICNDRYSQKLKSLVNYCLILSFRKPTK 515
Query: 465 SRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV 524
++ RL + N E ++ + IAL LAE D+R LN LQ+L ++ DI ++
Sbjct: 516 QQMAKRLVQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYDDIRQRL 575
Query: 525 V-GRKDMSRSAFDIWKEIF 542
+ +KD S F ++F
Sbjct: 576 LSSKKDEDISPFTAVDKLF 594
>gi|336468521|gb|EGO56684.1| hypothetical protein NEUTE1DRAFT_65451 [Neurospora tetrasperma FGSC
2508]
Length = 928
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 104/216 (48%), Gaps = 41/216 (18%)
Query: 301 KKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDV 360
+K + G + +++ GPPG+GKTT AH+AAK GY V+E NASD RS IEN + +V
Sbjct: 364 QKRGADGSGGYRAIIISGPPGIGKTTAAHLAAKMEGYDVIESNASDTRSKKLIENGVSEV 423
Query: 361 VQMNSVM---------ADSRPK--CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKE 409
+ S++ AD+R K LV+DE+DG +G V + K
Sbjct: 424 MTNTSLLGFFGGDGKHADARKKKIVLVMDEVDGMSAGDRGGVGTMAKF------------ 471
Query: 410 NVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVS 469
CKK + P+I ICN+ P ++ +A F +P+V ++ S
Sbjct: 472 ----------------CKKTEV--PLILICNERRLPKMKPFDHVAFDIKFQRPTVDQIRS 513
Query: 470 RLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
R+ IC+ E +K + L E + DIR +N +
Sbjct: 514 RIMTICHREGLKIPPPVVNALIEGSGRDIRQIINMI 549
>gi|403222871|dbj|BAM41002.1| uncharacterized protein TOT_030000263 [Theileria orientalis strain
Shintoku]
Length = 1053
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 151/351 (43%), Gaps = 72/351 (20%)
Query: 286 EYEN-SNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNA 344
EY++ +SKG DS+ K LL GPPG+GKTT A + + GY+V+E NA
Sbjct: 577 EYKHLGSSKGKDDSF------------KAALLSGPPGIGKTTCARLVGESFGYYVMEFNA 624
Query: 345 SDDRSSSTIEN---KILDVVQMNSV----MADSRPKCLVIDEIDGALGDGKGAVEVILKM 397
SD RS + +E + V +NS + D + LV+DEIDG +G ++ I+K+
Sbjct: 625 SDQRSKNAVEKITPLVTGTVTLNSFQNNSIRDLKRTLLVLDEIDGMSSGDRGGIQSIIKL 684
Query: 398 VSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVH 457
+ R C P+I ICND Y+ + +L
Sbjct: 685 IQIAR-----------------------C-------PIILICNDRYSQKISTLSNKCLDL 714
Query: 458 VFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNV 517
F PS+ + R+ IC E + + L L + D+R LN LQF K
Sbjct: 715 RFGSPSIELFIKRVNQICKLEKIPATENLLLDLYHKSNGDMRYTLNYLQFYATTKS---- 770
Query: 518 MDIGSQVVGRKD--MSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRG 575
D + +KD S++ FD ++F K LR+ +S NE F
Sbjct: 771 KDGPDGTINKKDESYSQNIFDNCNKVFNLSKMS-LRDKLSK----VNEIFFT-------- 817
Query: 576 DYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPL 626
DY+++ + EN ++ + V+ K C D++++ + RTQ L
Sbjct: 818 DYNIMSLMLQENYVKYNRNIGVISKIALDYVC---GDMVNKVMQRTQTYSL 865
>gi|410720679|ref|ZP_11360032.1| DNA polymerase III, gamma/tau subunit [Methanobacterium sp.
Maddingley MBC34]
gi|410600390|gb|EKQ54918.1| DNA polymerase III, gamma/tau subunit [Methanobacterium sp.
Maddingley MBC34]
Length = 500
Score = 107 bits (267), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 126/255 (49%), Gaps = 47/255 (18%)
Query: 307 GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV 366
G P QK LLL GPPG GKTTLAH+ A H+ E+NASD RS I N + + S+
Sbjct: 35 GDP-QKCLLLVGPPGTGKTTLAHLVAGEFSDHI-ELNASDKRSYDIIMNTVGEASASVSL 92
Query: 367 MADSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKG 425
K +++DE+DG G + +G + I K++ K+G
Sbjct: 93 FGQGGRKLIILDEVDGLHGNEDRGGIRAINKII------------------------KEG 128
Query: 426 CKKASLLRPVICICNDLYAPALRSLR------QIAKVHVFIQPSVSRVVSRLKHICNNES 479
P+I + NDLY+ ++SL+ +I KVH + +V+ LK IC E
Sbjct: 129 H------HPMIMMANDLYSKRIQSLKSKCQLIKINKVH------TNSIVALLKRICAKEG 176
Query: 480 MKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWK 539
+ L TLA+ + D+RS +N LQ + + K+ + D+ +V+ +KD + FD +
Sbjct: 177 VDFEEHVLRTLAKRSRGDLRSAINDLQVIAQGKDSVTSEDL--EVISQKDDINNIFDSVR 234
Query: 540 EIFQKRKTKRLRNSV 554
+ + + + +R+++
Sbjct: 235 TVLKSKNPRHIRDAL 249
>gi|190349037|gb|EDK41611.2| hypothetical protein PGUG_05709 [Meyerozyma guilliermondii ATCC
6260]
Length = 796
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 115/447 (25%), Positives = 188/447 (42%), Gaps = 128/447 (28%)
Query: 160 IDVLLQKVE-QEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTEL--LSDEQ 216
+D L + VE + + ++ +S + +++P L +KY P SF +L L +++
Sbjct: 122 MDKLFKTVELRNSLKSSIKASKQPSQSKNVP--------LLTEKYKPASFVDLCSLGNDK 173
Query: 217 TNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSN 276
R VL WLK+W VFG I +
Sbjct: 174 QYRMVLQWLKKWSPMVFGEPIPAPES---------------------------------- 199
Query: 277 GNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCG 336
+ + N ++E+ + HKK ++L+ GPPG+GKT AHV A+
Sbjct: 200 ---KTTYNRDFEDPYGRP-----HKK----------IMLIHGPPGIGKTAAAHVFARQMK 241
Query: 337 YHVVEVNA------------SDDRSS----STIENKILDVVQMNSVMADSRPKCLVIDEI 380
Y+V E+NA SD + S ++++ KI + + NSV+ +P C++IDEI
Sbjct: 242 YNVQEINAANSMDINQSIAESDKKGSRGAYASLKLKITNALTSNSVVGKGKPTCIIIDEI 301
Query: 381 DGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLL-RPVICIC 439
D + + + V+ +V ++ +SN K KK L+ RP+ICI
Sbjct: 302 DTSPNSNE-IIRVLSDIVRSDGRSN------------------KSSKKPFLMQRPIICIA 342
Query: 440 NDLYAPA----LRSLRQIAKVHVFIQPSVSRVVSR------------LKHICNNESMKTS 483
N Y+ + LR I++ F +P++S + L HI E +
Sbjct: 343 NSNYSTRQGNNMDVLRSISESVAFKKPNISSGSKKSNGNALKNFKEHLIHIAKKEDLNLD 402
Query: 484 SIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVG--RKDMSRSAFDIWKEI 541
A+ + E E D+R+CLN +QF +K LNV + ++ G KD S F + +
Sbjct: 403 YRAIGEIVEICEGDMRACLNYIQFNSQK---LNVPIMETKPGGGPNKDSDISWFALVNLL 459
Query: 542 FQKRKTKRLRNS-VSSSSNVSNEFDFL 567
F+ RNS S N FD L
Sbjct: 460 FK-------RNSNFSKEENFQQLFDLL 479
>gi|66808577|ref|XP_638011.1| replication factor C subunit [Dictyostelium discoideum AX4]
gi|74853625|sp|Q54MH9.1|RFC1_DICDI RecName: Full=Probable replication factor C subunit 1; AltName:
Full=Activator 1 subunit 1
gi|60466460|gb|EAL64515.1| replication factor C subunit [Dictyostelium discoideum AX4]
Length = 1401
Score = 107 bits (266), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 161/362 (44%), Gaps = 84/362 (23%)
Query: 299 WHKKTRSTGP---PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIEN 355
W + ST P ++ +LL GPPG+GKT+ A + K G+ +E+NASD RS S I+
Sbjct: 876 WLDQWNSTAPRDASKKNAVLLSGPPGIGKTSAALLICKQKGFEAIELNASDARSKSEIK- 934
Query: 356 KILDVVQMNS----------------VMADSRPK-CLVIDEIDGALGDG-KGAVEVILKM 397
++L V N V A+ + K +++DEIDG+ G+ +G + I+ +
Sbjct: 935 RLLSGVSDNQNITKFFGTTNQDTGKDVQANKKIKTAIILDEIDGSSGNSDRGGIAEIIGL 994
Query: 398 VSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVH 457
+ KK+ + P IC+CND Y+ + SLR
Sbjct: 995 I----------------------------KKSKM--PFICLCNDYYSSKVTSLRNHCMDL 1024
Query: 458 VFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNV 517
+P++++V SRL I +E MK SS + + + DIR +NTLQ + + K N
Sbjct: 1025 KLRKPTLNQVSSRLLAIAKHEGMKVSSYMIEKVYTSSHSDIRQSINTLQMMSRSKRDYNN 1084
Query: 518 MDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDY 577
++ +Q + KD S F + I ++ +SN++ + D+ S D+
Sbjct: 1085 DNV-TQSLQEKDFDISPFTAAELILRE-----------DNSNINKKLDYFFS------DF 1126
Query: 578 DVIFDGIHENIL---------QLQYHDPVMLKTVKCLDCLGNSDLMHQYI---MRTQQMP 625
++ I EN L Q +Y+D ++ D L +SD + I M +P
Sbjct: 1127 SLVPLIIQENYLKTRPYGGGSQSKYNDCELISM--AADALSDSDQFGRAIGKEMAWNLLP 1184
Query: 626 LY 627
Y
Sbjct: 1185 TY 1186
>gi|91081967|ref|XP_967820.1| PREDICTED: similar to replication factor C large subunit, putative
[Tribolium castaneum]
gi|270007366|gb|EFA03814.1| hypothetical protein TcasGA2_TC013927 [Tribolium castaneum]
Length = 985
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 146/331 (44%), Gaps = 56/331 (16%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS- 370
K LL GPPG+GKTT A + AK G +VE NASD RS + ++ ++ ++ +
Sbjct: 490 KCALLSGPPGVGKTTTATLVAKELGLDIVEFNASDTRSKKLLHEEVAQLLSTKTIAGYAT 549
Query: 371 ------RPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKK 423
R + L++DE+DG G + +G ++ +++++
Sbjct: 550 GQPNVNRNRVLLMDEVDGMAGNEDRGGIQELIQLI------------------------- 584
Query: 424 KGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTS 483
K +S+ P+IC+CND +RSL F +P + ++ + IC E++ S
Sbjct: 585 ---KNSSV--PIICMCNDRNHQKIRSLVNYCFDLKFTKPKLEQIRGAMMSICCKENIDVS 639
Query: 484 SIALTTLAEYTECDIRSCLNTLQFLDKKK-EILNVMDIGSQVVGRKDMSRSAFDIWKEIF 542
+ ALT + T CD+R LN L L K EI + +KD +++ + +F
Sbjct: 640 TQALTEIIAGTGCDVRQTLNHLALLGSTKGEITVEVAEKESKASKKDTVMGPWEVCRTVF 699
Query: 543 QKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQ---YHDPVML 599
K + K + S ++ + F F +SL +F I EN L++Q +L
Sbjct: 700 TKSEHKDM-----SVADRARLFFFDYSL-------GPLF--IQENYLRVQPEGSKKEGLL 745
Query: 600 KTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQ 630
K D + D++ I RT L Q
Sbjct: 746 KAALTADSISVGDIIESKIRRTNNWALLESQ 776
>gi|118397505|ref|XP_001031085.1| BRCT domain containing protein [Tetrahymena thermophila]
gi|89285407|gb|EAR83422.1| BRCT domain containing protein [Tetrahymena thermophila SB210]
Length = 1123
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 116/461 (25%), Positives = 186/461 (40%), Gaps = 125/461 (27%)
Query: 157 SEPIDVLLQKVEQ--EAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSD 214
S+P +LQ + + EA S + Q + + KP EQ+W +KYAP+S + +
Sbjct: 457 SQPSKKILQPLNKPKEATKYDPKSKQQNQQPQMVIHKPPKQEQIWTEKYAPSSINLCIGN 516
Query: 215 EQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRW 274
++ +++ WL W V I NKKQ +SF +
Sbjct: 517 QKNYEKMMEWLHDWVEVV---------------------IKGNKKQVKNSFFNR------ 549
Query: 275 SNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKH 334
+ G NS+N+ K LL GPPG+GKTT + AK
Sbjct: 550 AQGVPDNSSNVNA------------------------KACLLSGPPGIGKTTSVRLIAKF 585
Query: 335 CGYHVVEVNASDDRSSSTIEN--------KILDVVQMNS------------VMADSRPKC 374
GY + E NASD+R+ ++ N IL++++ N+ V A + K
Sbjct: 586 MGYEIREWNASDERNKKSVNNILGDLKSNSILNLLKKNNTSDQTNNKADDEVEAKTNKKF 645
Query: 375 LVI-DEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLR 433
+++ DE+DG +G + ++ + NT NV
Sbjct: 646 IILMDEVDGMSSGDRGGNQALIDAIK-----NT---NV---------------------- 675
Query: 434 PVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSI-ALTTLAE 492
P+ CICND P +RSL FI+P+ V +K++C E K I +L ++E
Sbjct: 676 PIFCICNDRMNPKIRSLANHCYDIKFIKPAKQDVAKYMKNVCEQEGFKDVEIESLEAISE 735
Query: 493 YTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMS--RSAFDIWKEIFQKRKTKR- 549
D+R LN L+ K + L ++ G+KD + AF ++ Q K ++
Sbjct: 736 RFGNDLRQTLNFLEMHFKTSKRLQGINSKQLNSGQKDATVMLDAFQASTQLMQSFKFQKM 795
Query: 550 -LRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENIL 589
LR + E F+ DYD+I +H+N L
Sbjct: 796 TLRERI--------ELFFI--------DYDLIPLLVHQNYL 820
>gi|452001330|gb|EMD93790.1| hypothetical protein COCHEDRAFT_1171930 [Cochliobolus
heterostrophus C5]
Length = 1080
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 120/246 (48%), Gaps = 44/246 (17%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS 370
+K+LLL GPPGLGKTTLAHV A+ GY V E+NASD+RS + ++ +I D+V +V
Sbjct: 401 RKILLLTGPPGLGKTTLAHVCARQAGYEVQEINASDERSGNVVKGRIRDMVGTENVRG-- 458
Query: 371 RPKCLVIDEIDGALGDGK---------------------------GAVEVILKMVSAERK 403
I+ + DGK G ++ ++ +++ + K
Sbjct: 459 ---------INTSTADGKVRKAGKPVCVVVDEVDGVVGSGGSGEGGFIKALIDLINLDEK 509
Query: 404 SNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQ--IAKVHVFIQ 461
++ A + Q +KKK K LLRP+I ICNDLY P+LR LRQ +A++ +
Sbjct: 510 NSKA----LGQGQSNTGTKKKKGDKFRLLRPLILICNDLYHPSLRPLRQSSLAEIVHIRK 565
Query: 462 PSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIG 521
P ++ VVSR++ I E ++ S + L E T + +I +M +
Sbjct: 566 PGLNMVVSRMQDIFTKEGIQCDSDGVRRLCEATWGVSTKKEGGTGSGTGEGDIRGIMVVS 625
Query: 522 SQVVGR 527
+ GR
Sbjct: 626 EWIAGR 631
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 19/104 (18%)
Query: 131 YVKISSSGVEERVKKLDV-RAHSNSLTSEPIDVLLQKVEQEAFNKALNSSSEGQSDRSLP 189
Y ++ + + K LD +A SNS+ + +++ Q VEQ +S G+S R+L
Sbjct: 293 YYGLNIHQLMDEAKTLDQEKALSNSMKN--LELPKQSVEQP-------TSKSGKSSRTL- 342
Query: 190 EKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVF 233
+W +KY FT+L+ DE+T+R VL WLK WD VF
Sbjct: 343 --------MWTEKYRAKKFTDLVGDERTHRSVLRWLKAWDPIVF 378
>gi|260950765|ref|XP_002619679.1| hypothetical protein CLUG_00838 [Clavispora lusitaniae ATCC 42720]
gi|238847251|gb|EEQ36715.1| hypothetical protein CLUG_00838 [Clavispora lusitaniae ATCC 42720]
Length = 784
Score = 106 bits (265), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 129/272 (47%), Gaps = 52/272 (19%)
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDD-----------------RSSS 351
P +KVLL+ GP G GKT H+ A+ GY V E+NA++ +++
Sbjct: 191 PLRKVLLVHGPSGTGKTAAVHLIAQQMGYSVQELNAANSMDSMHGVESLDNAGRFANATA 250
Query: 352 TIENKILDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENV 411
++ KI + + NSV +P CLVIDEID ++ G I++++S E V
Sbjct: 251 ALKLKIKNALTTNSVTGGGKPTCLVIDEIDCSINAGD-----IIRVIS---------ELV 296
Query: 412 AKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALR-------SLRQIAKVHVFIQPSV 464
A + + E KKK K L RP+ICI ND+Y +R LR + ++ F +P
Sbjct: 297 ALDSRSEDPKKKKS--KFVLNRPIICIANDIYTQNVRLGPNPMDKLRPLCELVPFRRPVS 354
Query: 465 SRVVSR------------LKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKK 512
S R L+++ + E M + + + E E DIR+CLN +QF +K
Sbjct: 355 SNNSGRINIAAQKSVKEFLQNVNSKEKMGLDAKEIAEIFEVCEGDIRACLNHMQFSSRKL 414
Query: 513 EILNVMDIGSQVVGRKDMSRSAFDIWKEIFQK 544
+ G + + KD S S F + +IF++
Sbjct: 415 DSDLHALAGPKALAAKDSSVSWFALVDQIFRR 446
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 160 IDVLLQKVEQEAFNKALNSSSEGQSDRSLPEKPVVHE----QLWVDKYAPNSFTELLS-- 213
+D L ++V Q + L S E R+ P+ + Q+W +KY P + +L S
Sbjct: 99 MDTLYERVRQR---EVLRQSREEVRRRTQPKPSKSSQAPLPQVWSEKYRPTKYMQLCSAG 155
Query: 214 DEQTNREVLLWLKQWDSCVFG 234
+E+ R ++ WL++W S VFG
Sbjct: 156 NERQYRAIMHWLRKWGSVVFG 176
>gi|195452278|ref|XP_002073285.1| GK14054 [Drosophila willistoni]
gi|194169370|gb|EDW84271.1| GK14054 [Drosophila willistoni]
Length = 983
Score = 106 bits (264), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 137/321 (42%), Gaps = 59/321 (18%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRS--------SSTIENKILDVVQM 363
K LL GPPG+GKTT A + K G+ VE NASD RS SS + NK L
Sbjct: 469 KAALLSGPPGIGKTTTATLVVKELGFDAVEFNASDTRSKRLLKEEVSSLLGNKTLYGYCN 528
Query: 364 NSVMADSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISK 422
A S+ L++DE+DG G + +G ++ ++ ++
Sbjct: 529 GQSQAVSKKHVLIMDEVDGMAGNEDRGGMQELIALI------------------------ 564
Query: 423 KKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKT 482
K +S+ P+IC+CND P +RSL F +P + ++ R+ IC E MK
Sbjct: 565 ----KDSSV--PIICMCNDRNHPKIRSLVNYCYDLRFQRPRIEQIKGRIMSICFKEKMKI 618
Query: 483 SSIALTTLAEYTECDIRSCLNTLQFLDKKKEILN-VMDIGSQVVGRKDMSRSAFDIWKEI 541
+ + T DIR +N + L E + G V KD+ +++ +++
Sbjct: 619 PPAKVEEIIAATNNDIRQSINHIALLSASGEGASPTQKAGVDKVASKDLKLGPWEVVRKV 678
Query: 542 FQKRKTKRLRNSVSSSSNVSNEFD-FLHSLISNRGDYDVIFDGIHENILQLQ---YHDPV 597
F + + K + N++++ D F H DY + + N LQ+ + D
Sbjct: 679 FTQEEHKHM--------NLNDKCDLFFH-------DYSMGPLFVQHNYLQVTPQGHRDTY 723
Query: 598 MLKTVKCLDCLGNSDLMHQYI 618
M K D L DL+ + I
Sbjct: 724 MAKVAATADALSLGDLVEKRI 744
>gi|340975788|gb|EGS22903.1| replication factor C subunit-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 1041
Score = 105 bits (263), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 103/219 (47%), Gaps = 42/219 (19%)
Query: 299 WHKKTRST-GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKI 357
W+ + R G + +++ GPPG+GKTT AH+AAK GY V+E NASD R+ +E +
Sbjct: 484 WNFQKRGADGMGGYRAIIISGPPGIGKTTAAHLAAKLEGYDVIESNASDTRNKKLVEEGV 543
Query: 358 LDVVQMNSVM-----------ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNT 406
D++ S++ A + L++DE+DG +G V + K+
Sbjct: 544 TDILNNTSLLGYFAGDGKKVDATKKRIVLIMDEVDGMSAGDRGGVGALAKL--------- 594
Query: 407 AKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSR 466
C+K + P+I ICND P ++ +A F +P+V +
Sbjct: 595 -------------------CRKTEV--PMILICNDRRLPKMKPFDHVAFDIKFQRPTVDQ 633
Query: 467 VVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
+ SR+ IC+ E +K S L L E + DIR +N L
Sbjct: 634 IRSRMMTICHREGLKMSPPVLNALIEGSGKDIRQIINML 672
>gi|303283302|ref|XP_003060942.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457293|gb|EEH54592.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 949
Score = 105 bits (263), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 123/472 (26%), Positives = 190/472 (40%), Gaps = 108/472 (22%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA--- 368
K +L+ GPPG+GK++ A + +K G+ V EVNASD R S+ N I D V S A
Sbjct: 420 KAVLISGPPGIGKSSAASIISKQLGFEVTEVNASDTRGKSS--NDIRDGVGGKSSNAVRE 477
Query: 369 ----------DSRPK--CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQ 416
PK L++DE+DG G +G V ++ +
Sbjct: 478 MVTNKAMSFFGGPPKKTVLIMDEVDGMSGGDRGGVMELINCI------------------ 519
Query: 417 PEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICN 476
KISK P+ICICND Y L+SL+ F +P+ ++V R+ I
Sbjct: 520 --KISKI----------PIICICNDKYNQKLKSLQNYVLDMPFSRPTKGQIVKRMLLIAE 567
Query: 477 NESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFD 536
E ++ + A+ L E T DIR +N LQ K+ DI S + +KD+ F
Sbjct: 568 QEGIQMNEAAMEALIETTNNDIRLIINQLQMRRLTKQSFAYDDIKS--LAKKDIDMGPFT 625
Query: 537 IWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQ-YHD 595
+L ++ V+ + + D D+I I EN +Q + Y
Sbjct: 626 A---------VDKLCAPDANRLTVTERLNLVFQ------DSDIIPLFIQENYVQYRPYAA 670
Query: 596 PVMLKTVKCLDCLGNS----DLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEW 651
++ ++ L S D+M++ I Q L Y +VS +
Sbjct: 671 KNDVERLQLLSAAATSISEGDVMNKSIRAKQNWGLMPYA--------NIVSSVM------ 716
Query: 652 PKSYQR-YRNAFM-----EKMDIFKSWHSK----------IPPYISRHLSTESLVEDSIS 695
P S R R F + F SW K + S +++E D+ S
Sbjct: 717 PASTMRGSREVFGLHPGERNFNRFPSWLGKNSTHGKNKRLLQEVHSHAMTSEGFKADAAS 776
Query: 696 ------PLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKS 741
PLL +L T RP+ L KEK + + ++ M +Y LT ++ +S
Sbjct: 777 LREYYLPLLKLL---TTRPMKSAALGGKEKEGIPEAMATMDAYCLTRQDWES 825
>gi|146411949|ref|XP_001481946.1| hypothetical protein PGUG_05709 [Meyerozyma guilliermondii ATCC
6260]
Length = 796
Score = 105 bits (263), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 115/447 (25%), Positives = 186/447 (41%), Gaps = 128/447 (28%)
Query: 160 IDVLLQKVE-QEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTEL--LSDEQ 216
+D L + VE + + ++ +S + +++P L +KY P SF +L L +++
Sbjct: 122 MDKLFKTVELRNSLKSSIKASKQPSQSKNVP--------LLTEKYKPASFVDLCSLGNDK 173
Query: 217 TNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSN 276
R VL WLK+W VFG I +
Sbjct: 174 QYRMVLQWLKKWSPMVFGEPIPAPES---------------------------------- 199
Query: 277 GNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCG 336
+ + N ++E+ + HKK ++L+ GPPG+GKT AHV A+
Sbjct: 200 ---KTTYNRDFEDPYGRP-----HKK----------IMLIHGPPGIGKTAAAHVFARQMK 241
Query: 337 YHVVEVNA------------SDDRSS----STIENKILDVVQMNSVMADSRPKCLVIDEI 380
Y+V E+NA SD + S ++++ KI + + NSV+ +P C++IDEI
Sbjct: 242 YNVQEINAANSMDINQLIAESDKKGSRGAYASLKLKITNALTSNSVVGKGKPTCIIIDEI 301
Query: 381 DGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLL-RPVICIC 439
D + + + V+ +V + +SN K KK L+ RP+ICI
Sbjct: 302 DTSPNSNE-IIRVLSDIVRLDGRSN------------------KSSKKPFLMQRPIICIA 342
Query: 440 NDLY----APALRSLRQIAKVHVFIQPSVSRVVSR------------LKHICNNESMKTS 483
N Y + LR I++ F +P++S + L HI E +
Sbjct: 343 NSNYLTRQGNNMDVLRSISESVAFKKPNISSGSKKSNGNALKNFKEHLIHIAKKEDLNLD 402
Query: 484 SIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVG--RKDMSRSAFDIWKEI 541
A+ + E E D+R+CLN +QF +K LNV + ++ G KD S F + +
Sbjct: 403 YRAIGEIVEICEGDMRACLNYIQFNSQK---LNVPIMETKPGGGPNKDSDISWFALVNLL 459
Query: 542 FQKRKTKRLRNS-VSSSSNVSNEFDFL 567
F+ RNS S N FD L
Sbjct: 460 FK-------RNSNFSKEENFQQLFDLL 479
>gi|321469644|gb|EFX80623.1| hypothetical protein DAPPUDRAFT_318220 [Daphnia pulex]
Length = 1045
Score = 105 bits (263), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 113/250 (45%), Gaps = 41/250 (16%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILD---------VVQ 362
K LL GPPG+GKTT AH+AAK GY +VE+NASD RS + +++
Sbjct: 524 KAALLSGPPGIGKTTTAHLAAKELGYDLVEMNASDTRSKRLLHEHVMELLSSQSLSSYAH 583
Query: 363 MNSVMADSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKIS 421
++ + R + LV+DE+DG G + +G ++ ++ M+ K S
Sbjct: 584 GSAQIEGGRKRVLVMDEVDGMAGNEDRGGIQELIAMI--------------------KTS 623
Query: 422 KKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMK 481
K PV+CICND P +RSL F +P + +V + IC E +
Sbjct: 624 K----------IPVVCICNDRQHPKIRSLSNYCYDLKFTKPKIEQVRGAMMSICFKEGLS 673
Query: 482 TSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVV-GRKDMSRSAFDIWKE 540
AL + D+R L+ L L K+ L+ + +KD+ +D+ K+
Sbjct: 674 LKPEALDEIIMGANQDVRQVLHHLSMLASGKKSLSTESAKLEASKSKKDLKLGPWDVVKK 733
Query: 541 IFQKRKTKRL 550
+F + K +
Sbjct: 734 VFSAEEHKGM 743
>gi|194746572|ref|XP_001955754.1| GF18917 [Drosophila ananassae]
gi|190628791|gb|EDV44315.1| GF18917 [Drosophila ananassae]
Length = 982
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 142/319 (44%), Gaps = 59/319 (18%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRS--------SSTIENKILDVVQM 363
K LL GPPG+GKTT A + AK G+ VE NASD RS S+ + NK L
Sbjct: 491 KAALLSGPPGIGKTTTATLVAKELGFDAVEFNASDTRSKRLLKEEVSTLLGNKSLAGYFN 550
Query: 364 NSVMADSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISK 422
A SR L++DE+DG G + +G ++ ++ ++
Sbjct: 551 GQGQAVSRKHVLLMDEVDGMAGNEDRGGMQELIALI------------------------ 586
Query: 423 KKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKT 482
K +S+ P+IC+CND P +RSL F +P + ++ ++ IC E +K
Sbjct: 587 ----KDSSI--PIICMCNDRNHPKIRSLVNYCYDLRFQRPRLEQIKGKIMSICFKEKVKI 640
Query: 483 SSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIF 542
S + + T DIR +N + L K++ +V G QV KD+ +++ +++F
Sbjct: 641 SPAKVEEIIAATNNDIRQSINHISLLSAKED--SVGKAGQQVA-TKDLKLGPWEVVRKVF 697
Query: 543 QKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHD---PVML 599
+ K + S++ S++ F H DY + + +N LQ+ V+
Sbjct: 698 TAEEHKHM--SLADKSDL-----FFH-------DYSLAPLFVQQNYLQVTPQGNKKDVLA 743
Query: 600 KTVKCLDCLGNSDLMHQYI 618
K D L DL+ + I
Sbjct: 744 KVAATADALSLGDLIDKKI 762
>gi|164424568|ref|XP_963539.2| hypothetical protein NCU06767 [Neurospora crassa OR74A]
gi|157070569|gb|EAA34303.2| hypothetical protein NCU06767 [Neurospora crassa OR74A]
Length = 1086
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 104/216 (48%), Gaps = 41/216 (18%)
Query: 301 KKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDV 360
+K + G + +++ GPPG+GKTT AH+AAK GY V+E NASD RS IE+ + +V
Sbjct: 522 QKRGADGSGGYRAIIISGPPGIGKTTAAHLAAKMEGYDVIESNASDTRSKKLIESGVSEV 581
Query: 361 VQMNSVM---------ADSRPK--CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKE 409
+ S++ AD+R K LV+DE+DG +G V + K
Sbjct: 582 MTNTSLLGFFGGDGKHADARKKKIVLVMDEVDGMSAGDRGGVGTMAKF------------ 629
Query: 410 NVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVS 469
CKK + P+I ICN+ P ++ +A F +P+V ++ S
Sbjct: 630 ----------------CKKTEV--PLILICNERRLPKMKPFDHVAFDIKFQRPTVDQIRS 671
Query: 470 RLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
R+ IC+ E +K + L E + DIR +N +
Sbjct: 672 RIMTICHREGLKIPPPVVNALIEGSGRDIRQIINMI 707
>gi|116194688|ref|XP_001223156.1| hypothetical protein CHGG_03942 [Chaetomium globosum CBS 148.51]
gi|88179855|gb|EAQ87323.1| hypothetical protein CHGG_03942 [Chaetomium globosum CBS 148.51]
Length = 1042
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 188/881 (21%), Positives = 303/881 (34%), Gaps = 216/881 (24%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LW +KY +F +L D+ TNR+VL WLK+WD VF + + ++ V+ L Q
Sbjct: 243 LWTEKYRARTFMDLCGDDLTNRQVLRWLKRWDPIVFPQAV-NKNKSVIRRLHSGPQQQQG 301
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
+ + + +R K GPP
Sbjct: 302 QSGQQGQPPEEEKPHR---------------------------KILMLHGPP-------- 326
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA--------D 369
GLGKTTLAHV A+ GY V+E+NASD+RS + +I + SV
Sbjct: 327 ---GLGKTTLAHVCARQAGYEVMEINASDERSKDVVRGRIRTSLGTESVKTVEHKKPEPG 383
Query: 370 SRPKCL----------VIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEK 419
+PK G V+ ++ +V ++K++T A +
Sbjct: 384 KQPKVARPVCVVVDEVDGVVGGSGGSGEGGFVKALIDLVLLDQKNSTGGAATAGAGR--- 440
Query: 420 ISKKKGCKKASLLRPVICICNDLYAPALRSLRQ--IAKVHVFIQPSVSRVVSRLKHICNN 477
KKKG +RP++ ICND+Y P+LR LRQ +A+V +P+V VV+RLK I
Sbjct: 441 -RKKKG-DDFRQMRPLVLICNDVYHPSLRPLRQSGLAEVIHVGKPTVEAVVTRLKTIFEK 498
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKE--ILNVMDIGSQVVGR-------- 527
E + A L E + S ++ + + E + VM +G V GR
Sbjct: 499 EGIPCEKDAARKLCE-AAWGMTSGIDAKRGAEGNAEGDLRGVMVVGEWVAGRLRATYPET 557
Query: 528 -KDMSRSAFD------------------------IWKEIFQ-------KRKTKRLRNSVS 555
++R D I IFQ + + V+
Sbjct: 558 THTLTRQWLDRHIIHDLAHGGGGARGLGRGGTKEIVTRIFQEGAGFPKQSAPAQQTTKVT 617
Query: 556 SSSNVSNEFDF-----------LHSLISNRGDYDVIFDGIHENILQLQYHDPVML-KTVK 603
+ F L +I G+ D I I ++D L K
Sbjct: 618 RHEQPQAQLGFAEQQKKYAMTRLREMIETSGEVDRIMTEIFLEYPNRDFNDDSFLTKPDL 677
Query: 604 CLDCLGNSDLMHQYIMRTQQMPL--YVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNA 661
+ L D I +Q+ L Y+ QP LA H L + P P++ Y
Sbjct: 678 AYEWLHFHDTCSSRIFSSQEWELAPYISQPILA--CHHLFA---SPRRHQPQTTSGYGGK 732
Query: 662 FMEKMD-----------------------------IFKSWHSKIPPYISRHLSTESLVED 692
+ E D + + H+++PP ++R + +
Sbjct: 733 WGEAADDSEGNEPPLPFSGPRADYAAYEAEKINRAVLQGIHAQLPPTLTRAFRSPEHIAT 792
Query: 693 SISPLLHILSPPTLRPVALHLLSAK-----------EKNDLAQLVSAMVSYSLTYKNTKS 741
P L L P + PV + + K EK + + + + K
Sbjct: 793 DFLPYLIRLVSPDVNPVMVGGSNDKSGAVASVRREAEKAMVKRAAQVLAEVGIALHKGKI 852
Query: 742 DPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLA------LAVKQVLVHEVEK 795
+P + + +P ++ TF+ + Y+LA AV+QVL E+ K
Sbjct: 853 EP--DAAAGPATRTQWVYRMEPDLDALATFE--TATAYLLASHAPTRYAVRQVLDQELYK 908
Query: 796 QRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTNNAAVSAKLIEKSKSLPYSRQCN 855
+ DS+ A+ + + P R
Sbjct: 909 -----------------------TLAQRDSEARQARLKTGGG-----DPHQPPPQPRNNT 940
Query: 856 PSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDRF---RKL-------SGKVS 905
+ + LT L +R + P + + R FF R R L GK
Sbjct: 941 STANPFLTPLQQNRRPDEHLNPNKNTTAGAAVR--RDFFGRVIAERPLLATGAAEDGKAR 998
Query: 906 QDNDNAVQKATVERDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
+ + V + ++EG NAV++PV + +FL
Sbjct: 999 KRKGGGRGEEAVGGGGGMVWVTYHEGMNNAVRKPVSLEEFL 1039
>gi|294657550|ref|XP_002770467.1| DEHA2E12496p [Debaryomyces hansenii CBS767]
gi|199432777|emb|CAR65810.1| DEHA2E12496p [Debaryomyces hansenii CBS767]
Length = 834
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 160/360 (44%), Gaps = 58/360 (16%)
Query: 305 STGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNA---------SDDRSSSTIEN 355
S G P +K LL+ GP G+GKT+ AH+ A+ GY+V E+NA S + +T N
Sbjct: 212 SLGRPHRKFLLVNGPSGIGKTSAAHILARQLGYNVQELNAANSMDTLPQSTGSTGTTYSN 271
Query: 356 -------KILDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSN--T 406
KI++ + NS+ ++ +P CLVIDEID ++ + V+V+ ++ +++++N +
Sbjct: 272 ATVALKLKIMNALTTNSLTSNGKPTCLVIDEIDSSI-NSHEIVKVLNELAYSDQRANYRS 330
Query: 407 AKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPA----------LRSLRQIAKV 456
+ K K K L RP+ICI ND+Y+ + LR + +
Sbjct: 331 FRSEANKFTSSSDSKSNKKKKDFILNRPIICIANDIYSTGNSFRNAGGSPMDKLRPLCDI 390
Query: 457 HVFIQPSVSRVVSRLKH--------------ICNNESMKTSSIALTTLAEYTECDIRSCL 502
+PS ++ VS K I E++ L + E E DIR+C+
Sbjct: 391 VTMRKPSSTKTVSGFKRGGNASRSVKEHLMWINERENLGMDYQQLGEVVEVCEGDIRACI 450
Query: 503 NTLQFLDKKKEILNVMDIGSQVVGR--KDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNV 560
N LQF +K ++ N M SQ + R KD S F + +F++ +S N
Sbjct: 451 NYLQFNGRKVDLPN-MPSASQDISRYNKDSQISWFVMVDLLFKRDP------QLSKDENF 503
Query: 561 SNEFDFL-----HSLISNRGDYDVIFDGIHENILQLQY-HDPVMLKTVKCLDCLGNSDLM 614
D + S SN G D + G L + + D + K + D L DLM
Sbjct: 504 MALMDIVMNGEGKSTSSNHGSLDKVIRGCFNRYLDIVHVQDDTLNKPSELSDWLSFYDLM 563
Score = 43.9 bits (102), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 160 IDVLLQKVEQEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLS--DEQT 217
+D L +K+ K+L + E S + Q+W +KY P++F +L S +++
Sbjct: 128 MDELFKKIN---IKKSLKHNHEKSKSTSNKRRQSQQCQVWTEKYRPSNFVQLCSAGNDKQ 184
Query: 218 NREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRH 251
R +L WLK+W VFG E S ++ V S R H
Sbjct: 185 YRLILHWLKKWSHVVFG-EAASMNDNVDSLGRPH 217
>gi|328873528|gb|EGG21895.1| replication factor C subunit [Dictyostelium fasciculatum]
Length = 1578
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 115/235 (48%), Gaps = 41/235 (17%)
Query: 313 VLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV------ 366
+L+ GPPG+GKTT A + K GY V+E+NASD RS + I++ + V S+
Sbjct: 1064 AVLIAGPPGIGKTTCASMILKEMGYDVIEMNASDTRSKNDIDHLLGGVSDNTSITQFFSV 1123
Query: 367 --MADSRPKCLVIDEIDGALGDG-KGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKK 423
++ K +++DE+DG+ G+ +G ++ I+ M+ K SK
Sbjct: 1124 NKQVKTKKKAIIMDEVDGSSGNNDRGGIKEIIGMI--------------------KTSK- 1162
Query: 424 KGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTS 483
P ICICND Y+ ++SL+ F +P+ +V RL I NE M+ +
Sbjct: 1163 ---------VPFICICNDYYSTKIKSLKSYCLEMRFNRPTPKQVSDRLLQIAKNEGMQLN 1213
Query: 484 SIALTTLAEYTECDIRSCLNTLQFLDK-KKEILNVMDIGSQV-VGRKDMSRSAFD 536
L T+ DIR ++ +Q L++ E +N ++I ++ + KD S F+
Sbjct: 1214 QYMAEKLFLSTKNDIRQTIHLMQMLNRGNNEKINPLNIDKKIEMAVKDFETSPFE 1268
>gi|18376023|emb|CAB91757.2| related to replication factor C protein [Neurospora crassa]
Length = 1092
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 104/216 (48%), Gaps = 41/216 (18%)
Query: 301 KKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDV 360
+K + G + +++ GPPG+GKTT AH+AAK GY V+E NASD RS IE+ + +V
Sbjct: 528 QKRGADGSGGYRAIIISGPPGIGKTTAAHLAAKMEGYDVIESNASDTRSKKLIESGVSEV 587
Query: 361 VQMNSVM---------ADSRPK--CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKE 409
+ S++ AD+R K LV+DE+DG +G V + K
Sbjct: 588 MTNTSLLGFFGGDGKHADARKKKIVLVMDEVDGMSAGDRGGVGTMAKF------------ 635
Query: 410 NVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVS 469
CKK + P+I ICN+ P ++ +A F +P+V ++ S
Sbjct: 636 ----------------CKKTEV--PLILICNERRLPKMKPFDHVAFDIKFQRPTVDQIRS 677
Query: 470 RLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
R+ IC+ E +K + L E + DIR +N +
Sbjct: 678 RIMTICHREGLKIPPPVVNALIEGSGRDIRQIINMI 713
>gi|385806401|ref|YP_005842799.1| replication factor C large subunit [Fervidicoccus fontis Kam940]
gi|383796264|gb|AFH43347.1| replication factor C large subunit [Fervidicoccus fontis Kam940]
Length = 458
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 157/373 (42%), Gaps = 63/373 (16%)
Query: 286 EYENSNSK-GIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNA 344
EY N + I SW K P +K +LL GPPG+GKT+L A GY +VE NA
Sbjct: 20 EYVNQETAVAIITSWIKDWEKRAPT-KKAVLLYGPPGVGKTSLIEALANDYGYEIVETNA 78
Query: 345 SDDRSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALGDG-KGAVEVILKMVSAERK 403
SD R I K+ + ++ R K +++DE+DG G KG +E I+++++ +
Sbjct: 79 SDYRRRDDIYRKVYNSAIQGTLTG--RKKLILLDEVDGLSSTGDKGGIEAIVQLITQTKN 136
Query: 404 SNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPS 463
P+I N+ + P L+ +R +A + +
Sbjct: 137 ------------------------------PIILTANNAFHPDLKPIRDLAVMIELKNLN 166
Query: 464 VSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQ 523
V++ LK IC E ++ L + E D+R+C+N LQ + + +N ++ ++
Sbjct: 167 QKHVLTVLKIICEREGVECEDAGLKVIYEKNRGDLRACINDLQSIAEVYGKVN-EELATE 225
Query: 524 VVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDG 583
+ +D + FD + IF + + RN++S HS + D D + +
Sbjct: 226 LTYYRDRELNPFDTLRNIFTSKYVWQSRNAIS------------HSEV----DTDTLIEW 269
Query: 584 IHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPL---AITVHRL 640
+ ENI +Q DP L +D+ I +T Y + AI+ R
Sbjct: 270 LSENI-PVQLTDPE--DAYLAFQALSRADVYRGIIKKTGNYDFLAYITEMIGPAISFSR- 325
Query: 641 VSQIQKPNLEWPK 653
+K +W K
Sbjct: 326 ----KKTKFKWLK 334
>gi|307596341|ref|YP_003902658.1| AAA ATPase [Vulcanisaeta distributa DSM 14429]
gi|307551542|gb|ADN51607.1| AAA ATPase central domain protein [Vulcanisaeta distributa DSM
14429]
Length = 435
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 156/358 (43%), Gaps = 68/358 (18%)
Query: 297 DSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENK 356
+ W K G P +K ++L GPPG GKTTLA+ A GY V+E+NASD R+ I
Sbjct: 34 NDWEK-----GKPSKKAVMLVGPPGTGKTTLAYALANERGYEVLELNASDVRTGERIRQV 88
Query: 357 ILDVVQMNSVMADSRPKCLVIDEIDGA-LGDGKGAVEVILKMVSAERKSNTAKENVAKED 415
+ ++M S+ + + ++ DE+DG + + +G + I++++ R+S
Sbjct: 89 MGGSMKMGSLFG-FKGRIILFDEVDGLNVREDRGGLAAIVELI---RESTW--------- 135
Query: 416 QPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHIC 475
P+I N+ + P R LR A+V +++ L+ IC
Sbjct: 136 ------------------PIIMTANNPWDPKFRELRDEAEVIQLKPLDEDDILTILRRIC 177
Query: 476 NNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAF 535
N E +K AL +AE + D+R+ +N LQ + K++L D+ V + F
Sbjct: 178 NAEGIKCEEDALKLIAESSGGDVRAAINDLQAAAEGKKVLTKDDV---TVTERAHQFDMF 234
Query: 536 DIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHD 595
I ++F R+ + R+ FL S D++ + +NI
Sbjct: 235 KILDKVFHARRFEEARS-----------VTFLPSF-----DWESYYPWALDNI------P 272
Query: 596 PVMLKTV----KCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNL 649
V K+V + LD L SD++ IM+TQ+ L Y L LV KP L
Sbjct: 273 SVYAKSVEAVSEALDNLSLSDVVRGRIMKTQEWELMPYMLELMTAGVALVR--NKPAL 328
>gi|156063576|ref|XP_001597710.1| hypothetical protein SS1G_01906 [Sclerotinia sclerotiorum 1980]
gi|154697240|gb|EDN96978.1| hypothetical protein SS1G_01906 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1006
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 173/757 (22%), Positives = 294/757 (38%), Gaps = 173/757 (22%)
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA 368
P +K+L+L GPPGLGKTTLAHV A+ GY V+E+NASD+RS ++ +I V +V
Sbjct: 301 PHRKILMLTGPPGLGKTTLAHVCARQAGYEVMEINASDERSRDVVKGRIRTSVGTENVKT 360
Query: 369 DS-------------RPKCLVIDEIDGALGDGKGA-----VEVILKMVSAERK-SNTAKE 409
S P C+V+DE+DG +G G+ ++ ++ ++ ++K S+T
Sbjct: 361 GSTVTSKSGHVSKNAHPLCVVVDEVDGVVGGAGGSGEGGFIKALIDLILLDQKNSSTVGT 420
Query: 410 NVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQ--IAKVHVFIQPSVSRV 467
N + SKKK LLRP+I ICND+Y P+LR LR A+V +P + V
Sbjct: 421 NTS-------YSKKKKGDDFRLLRPLILICNDVYHPSLRPLRNSSFAEVIHIRKPPLDAV 473
Query: 468 VSRLKHICNNESMKTSSIALTTLAEYT----------------ECDIRSCLNTLQFLDKK 511
V R++ + E + S A+ L E T E D+RS + ++ K
Sbjct: 474 VQRMQTVFEKEGVSCDSDAIRQLCEATWGISRMDSKKGAEGTGEGDLRSIMVVGEWAAGK 533
Query: 512 KEI---------------------LNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRL 550
+ L+ GS+ VGR + ++ E +
Sbjct: 534 LKTESKGQRPRLTRKWVEQNMTSDLSHGGGGSRAVGRGGIKEVVNRVFLEGAGFPRPTSF 593
Query: 551 RNSVSSSSNVSN--------------EFDFLHSLISNRGDYDVIFDGIHENILQLQYHDP 596
+N + S + L S+I GD D I I ++D
Sbjct: 594 KNIIPDDEFNSEPKTQLGVAELARKAGMERLGSMIETSGDTDRIMTDIFGEYPNQPFNDD 653
Query: 597 VML-KTVKCLDCLGNSDLMHQYIMRTQQMPL--YVYQPPLAITVHRLVSQIQK------- 646
+L K + L D + Q+ L Y+ QP LA H L + +
Sbjct: 654 SILSKPDAAYEWLHFHDSCSSRVFSGQEWELAGYLTQPILAW--HHLFASPARHYFRSDN 711
Query: 647 -PNLEW------------PKSYQRYRNAF----MEKMD--IFKSWHSKIPPYISRHL-ST 686
P +W P + R F MEK++ + +++ + R S
Sbjct: 712 QPTKKWNKNDEDAEPETEPLPFTGPRADFSAYEMEKLNRSTIQGLQAQLNAKLLRSFRSC 771
Query: 687 ESLVEDSISPLLHILSPPTLRPVALH----------LLSAKEKNDLAQLVSAMVSYSLTY 736
E + D + ++ ++S P ++P+ + + EK + + V M + Y
Sbjct: 772 EDIAMDLLPYVVRMIS-PDVKPIIVGGSGETKGVASVRKDTEKKMVKRAVDIMSEIGVVY 830
Query: 737 KNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITF--KGYRSNHYVLALAVKQVLVHEVE 794
+ + + G + + +PP++ +TF +S+ + AV+QVL E +
Sbjct: 831 ERGRLEGNALTTGRWGASEW-VYRMEPPLDTLVTFLTSPSKSDATNVRYAVRQVLDQEYQ 889
Query: 795 KQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTNNAAVSAKLIEKSKSLPYSRQC 854
K I++ + G N+D EE S EKSK
Sbjct: 890 KNIIVRENAARQARFKAG---NLDGGDEEYS----------------FEKSK-------- 922
Query: 855 NPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDRFRKLSGKVSQDNDNAVQK 914
+S + + + +K FF R + G +D + V
Sbjct: 923 ----------FGKGKSEKKVLGVGTGNEIRK------DFFGRVLEDRGVGGRDGNAGVGD 966
Query: 915 ATVE-----RDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
T ++ + F+EGF+NAV++P+ + + +
Sbjct: 967 NTESTRGKGKEEKKVWVTFHEGFSNAVRKPITIAELM 1003
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVF 233
+W +KY F EL D++T+R+VL WLK WD VF
Sbjct: 244 MWTEKYRARHFMELCGDDRTHRQVLRWLKAWDPIVF 279
>gi|295674171|ref|XP_002797631.1| chromosome transmission fidelity protein [Paracoccidioides sp.
'lutzii' Pb01]
gi|226280281|gb|EEH35847.1| chromosome transmission fidelity protein [Paracoccidioides sp.
'lutzii' Pb01]
Length = 983
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 134/321 (41%), Gaps = 93/321 (28%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LW +KY F +L+ DE+T+R VL WLK WD+ VF +++
Sbjct: 268 LWTEKYRARKFKDLVGDERTHRSVLRWLKSWDAIVF------------------PGLAKP 309
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
K +N + R +R K TGPP
Sbjct: 310 KPKNTTGNDAGERTHR---------------------------KVLVLTGPP-------- 334
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVI 377
GLGKTTLAHV A+ GY V+E+NASD+RS ++ +I D V +V +
Sbjct: 335 ---GLGKTTLAHVCARQAGYEVLEINASDERSRDIVKGRIRDAVGTENVKG-------IT 384
Query: 378 DEIDGALGDGKGA------------------------VEVILKMVSAERKSNTAKENVAK 413
E DG G ++ ++ +V ++K++ + ++
Sbjct: 385 AEADGKRIRKAGKPVCVVVDEVDGVVGGSGGSGEGGFMKALIDLVMLDQKNS---HSTSE 441
Query: 414 EDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLR--QIAKVHVFIQPSVSRVVSRL 471
K KKG K LLRP+I ICND+Y P+LR LR IA++ Q S+ ++V R+
Sbjct: 442 STSIHKRRYKKG-DKFLLLRPLILICNDVYHPSLRPLRTSSIAEILHVRQASLDKMVLRM 500
Query: 472 KHICNNESMKTSSIALTTLAE 492
K + E + + L E
Sbjct: 501 KTVFEREGIPCDGDGVRRLCE 521
>gi|380484477|emb|CCF39974.1| replication factor RFC1 C terminal domain-containing protein
[Colletotrichum higginsianum]
Length = 1039
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 48/227 (21%)
Query: 297 DSWHKKTR-------STGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRS 349
++WHK + + G + +++ GPPG+GKTT AH+AAK G+ V+E NASD RS
Sbjct: 481 ENWHKAKKYDFQRRGADGMGATRSIIISGPPGIGKTTSAHLAAKLAGFDVIESNASDTRS 540
Query: 350 SSTIENKILDVVQMNSVMA---------DSRPK--CLVIDEIDGALGDGKGAVEVILKMV 398
+EN + DV+ S++ D K L++DE+DG +G V + K
Sbjct: 541 KKLVENGVSDVMNNTSLLGFFAGDGKKVDGGKKNIVLIMDEVDGMSAGDRGGVGALAKF- 599
Query: 399 SAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHV 458
CKK + P+I ICN+ P ++ +A
Sbjct: 600 ---------------------------CKKTEI--PLILICNERKLPKMKPFDFVAMDVP 630
Query: 459 FIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
F +P+V +V SR+ IC+ E +K + L E + DIR +N +
Sbjct: 631 FRRPTVEQVRSRIMTICHREGLKLPVQVIDALIEGSNKDIRQIINMI 677
>gi|281202783|gb|EFA76985.1| replication factor C subunit [Polysphondylium pallidum PN500]
Length = 1512
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 135/297 (45%), Gaps = 62/297 (20%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMAD-- 369
+ LL GPPG+GKT+ A + K G+ VE NASD RS S IE K+L V N + +
Sbjct: 1031 RAALLSGPPGIGKTSAAVMICKEMGFEPVEYNASDTRSKSQIE-KLLSGVSDNHFITEFV 1089
Query: 370 ----SRPK--CLVIDEIDGALGDG-KGAVEVILKMVSAERKSNTAKENVAKEDQPEKISK 422
+PK +++DEIDG+ G+ +G V V+L+M+ + R
Sbjct: 1090 QNKKVQPKKVAIIMDEIDGSSGNADRGGVSVVLQMIKSTR-------------------- 1129
Query: 423 KKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKT 482
P+ICICND Y L +L+ F +P+ + V RL I +E+M
Sbjct: 1130 ----------IPIICICNDYYDKKLSTLKNYCLDLKFKKPTPAEVSDRLLQIAKHENMVM 1179
Query: 483 SSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGR--KDMSRSAFDIWKE 540
+ + + + + CDIR + ++Q L + K +I Q + + KD+ F ++
Sbjct: 1180 NRYMVEQVFQGSNCDIRQAITSMQMLSRAKVKATHNNI-QQTISKSLKDIDLGPFTSAQK 1238
Query: 541 IFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPV 597
+ Q SS ++ + D+ S D+ ++ + EN L ++DP
Sbjct: 1239 LLQ----------CDSSQSIDTKLDYYFS------DFSLVPLLVQENYL---FNDPT 1276
>gi|218884001|ref|YP_002428383.1| replication factor C large subunit [Desulfurococcus kamchatkensis
1221n]
gi|218765617|gb|ACL11016.1| replication factor C large subunit [Desulfurococcus kamchatkensis
1221n]
Length = 426
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 154/333 (46%), Gaps = 58/333 (17%)
Query: 298 SWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKI 357
SW K G P +K LL GPPG GKT+L A+ GY ++E+NASD R IE +I
Sbjct: 36 SWEK-----GKPSKKAALLHGPPGCGKTSLVEALARSKGYQLLEMNASDARRKEDIE-RI 89
Query: 358 LDVVQMNSVMADSRPKCLVIDEIDGA-LGDGKGAVEVILKMVSAERKSNTAKENVAKEDQ 416
+ + + + SR K +++DE+DG + G VE +++++
Sbjct: 90 VKLASRSGALTGSR-KIILLDEVDGMDVRADAGGVEALVEVI------------------ 130
Query: 417 PEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICN 476
K+S P+I N+ Y+ LR LR+++++ F + + VV+ LK IC+
Sbjct: 131 --KVSAN----------PIIMTANNPYSQMLRPLRELSEMIAFKRLTPRDVVTVLKRICS 178
Query: 477 NESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFD 536
E + AL +A+ +E D+RS +N L+ + E + + + S R D + + ++
Sbjct: 179 AEKLVCEDQALDEIAKRSEGDLRSAINDLEAMAGASERITLGLVKSFSTYR-DRTYAPYE 237
Query: 537 IWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDP 596
+++F R + R + +S+ +EF I+E+I Y D
Sbjct: 238 ALQKLFNSRYIFQAREAPTSTDLTPDEF----------------MVWINEHI-PTYYED- 279
Query: 597 VMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVY 629
+ + V+ D L +D+ I++T L Y
Sbjct: 280 -LEEIVRAYDALSKADVYMGRIIKTNNWDLLTY 311
>gi|347838459|emb|CCD53031.1| similar to chromosome transmission fidelity protein 18 [Botryotinia
fuckeliana]
Length = 1003
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 173/752 (23%), Positives = 297/752 (39%), Gaps = 166/752 (22%)
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA 368
P +K+LLL GPPGLGKTTLAHV A+ GY V+E+NASD+RS ++ +I V +V
Sbjct: 301 PHRKILLLTGPPGLGKTTLAHVCARQAGYEVMEINASDERSRDVVKGRIRTSVGTENVKT 360
Query: 369 DS-------------RPKCLVIDEIDGALGDGKGA-----VEVILKMVSAERKSNTAKEN 410
S P C+V+DE+DG +G G+ ++ ++ +V ++K+++A
Sbjct: 361 GSTVTSKSGHVSKNAHPLCVVVDEVDGVVGGSGGSGEGGFIKALIDLVLLDQKNSSAVGT 420
Query: 411 VAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQ--IAKVHVFIQPSVSRVV 468
SKKK LLRP+I +CND+Y P+LR LR A++ +P + VV
Sbjct: 421 NT------NYSKKKKGDDFRLLRPLILVCNDVYHPSLRPLRNSSFAEIIHIRKPPLDAVV 474
Query: 469 SRLKHICNNESMKTSSIALTTLAEYT----------------ECDIRSCLNTLQFLDKKK 512
R++ + E + S A+ L E T E D+RS L ++ K
Sbjct: 475 QRMQTVFEKEGVSCDSDAIRRLCEATWGISPMDTKKGAEGTGEGDLRSILVVGEWAAGKL 534
Query: 513 EI---------------------LNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLR 551
L+ GS+ VGR + ++ E + +
Sbjct: 535 RTEAKGERPRLTRKWVEQNMTGDLSHGGGGSRAVGRGGIKEVVNRVFLEGAGFPRPTSFK 594
Query: 552 NSVSSSSNVSN--------------EFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPV 597
N V + + + L S+I GD D I I ++D
Sbjct: 595 NIVPDDAFNTEPKTQLGVAELARKAGMERLGSMIETSGDTDRIMTDIFGEYPNQPFNDDS 654
Query: 598 ML-KTVKCLDCLGNSDLMHQYIMRTQQMPL--YVYQPPLAITVHRLVSQIQK-------- 646
+L K + L D + Q+ L Y+ QP LA H L + +
Sbjct: 655 ILSKPDAAYEWLHFHDSCSSRVFSGQEWELAGYLTQPVLAW--HHLFASPARHYFRSDNQ 712
Query: 647 PNLEW------------PKSYQRYRNAF----MEKMD--IFKSWHSKIPPYISRHL-STE 687
PN +W P + R F MEK++ + +++ + R S E
Sbjct: 713 PNKKWSKNDEDAEPEAEPLPFTGPRADFSAFEMEKLNRSTIQELQAQLDAKLLRSFRSCE 772
Query: 688 SLVEDSISPLLHILSPPTLRPVAL-------HLLSAK---EKNDLAQLVSAMVSYSLTYK 737
+ D + ++ ++S P ++P+ + + S + EK + + V M + ++
Sbjct: 773 DIAMDLLPYVVRMIS-PEVKPIIVGGSGETKGIASVRKDSEKRMVKRAVDVMSEIGVMFE 831
Query: 738 NTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITF--KGYRSNHYVLALAVKQVLVHEVEK 795
+ + ++ G + +PP++ +TF +++ + AV+QVL E +K
Sbjct: 832 RGRLEG--SDAGAKWGASEWVYRMEPPLDTLVTFLTSPIKNDATNVRYAVRQVLDQEYQK 889
Query: 796 QRIMQVTIGKSEHLADGYKENMDLAGEEDSKTESAKTNNAAVSAKLIEKSKSLPYSRQCN 855
I++ + G N+D EE S EK K
Sbjct: 890 NIIVRENKARQARYKLG---NVDGGDEEYS----------------FEKGK--------- 921
Query: 856 PSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDRFRKLSGKV-SQDNDNAVQK 914
+S + + + KK F DR +G V + +N +K
Sbjct: 922 ---------FGKGKSEKNVLGVGTGNEIKKDF-FGRVLEDRVLGKNGNVGAGENRGGGEK 971
Query: 915 ATVERDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
E+ + F+EGF+NAV++P+ + + +
Sbjct: 972 KMPEKK---VWVTFHEGFSNAVRKPITIGELM 1000
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVF 233
+W +KY F EL D++T+R+VL WLK WD VF
Sbjct: 244 MWTEKYRARHFMELCGDDRTHRQVLRWLKAWDPIVF 279
>gi|428185128|gb|EKX53981.1| replication factor C subunit 1 [Guillardia theta CCMP2712]
Length = 1046
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 146/352 (41%), Gaps = 81/352 (23%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-- 368
++ +L+ GPPG+GKT+ A + Y VVE+NASD R+ + I+ K+ + +S+
Sbjct: 508 KRAVLITGPPGIGKTSTARLVITSLKYDVVEMNASDVRNKAGIDEKVSSLTSNHSLSGYF 567
Query: 369 --------DSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
+R CL++DE+DG G +G V+ ++ ++ R
Sbjct: 568 SKSEQSKIGNRRTCLIMDEVDGMSGGDRGGVQELINLIKNTR------------------ 609
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
P++CI ND Y + SL+ F +P + VV RL+ I E
Sbjct: 610 ------------VPIVCIANDYYDKKISSLKNWCLDLRFQKPGKNLVVKRLEQIAREEGF 657
Query: 481 KTSSI-----ALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMS---R 532
+ AL L E DIR +N+LQ + LN D+ G K+ S
Sbjct: 658 QIKDRNVFQNALEKLVEGANGDIRHVINSLQTWRMRSNELNFADVAEMQKGGKEQSVVQA 717
Query: 533 SAFDIWKEIF---QKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENIL 589
S FD+ E F QKR L + + + F F D D+I + EN L
Sbjct: 718 SIFDVSTEWFLDSQKRNNATLGDRL-------DMFFF---------DADLIPLLVQENYL 761
Query: 590 QLQYHDP-----------VMLKTVKCLDCLGNSDLMHQYIMRTQQ---MPLY 627
+ + P +M + + + + +SDL++ I + Q +P Y
Sbjct: 762 KTRTSLPPDEVKKNPEFHLMERMSRAAESISDSDLINSDIRKNQHWSLLPCY 813
>gi|41615216|ref|NP_963714.1| replication factor C large subunit [Nanoarchaeum equitans Kin4-M]
gi|42559421|sp|P60373.1|RFCL_NANEQ RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|40068940|gb|AAR39275.1| NEQ430 [Nanoarchaeum equitans Kin4-M]
Length = 430
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 143/323 (44%), Gaps = 63/323 (19%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSR 371
K LLL GPPG GKT+ + A GY V+EVNASD+R + I + + + + + R
Sbjct: 69 KALLLYGPPGTGKTSSVYALANELGYEVLEVNASDERDAIHIHHIVGEASKGKPLFHKGR 128
Query: 372 PKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKAS 430
+++DE+DG G + +G V ++ ++ K++S
Sbjct: 129 --IILVDEVDGLSGKEDRGGVGALVNII----------------------------KQSS 158
Query: 431 LLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTL 490
P+IC ND + L+ LR+I+ + F + S V + LK I NE +K S L +
Sbjct: 159 W--PIICTANDPWDQKLKKLREISIMVEFKRLSPKHVYNVLKKIVTNEKIKISDKILWDI 216
Query: 491 AEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRL 550
A + D+R+ +N L+ I+ I V DI+K + KT+ L
Sbjct: 217 AYKSGGDLRAAINDLE------TIIKSGIIDENFVKALGNREQEIDIFKALGIMFKTENL 270
Query: 551 RNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTV----KCLD 606
+VS+ +NV EF D IF + ENI PV K + +
Sbjct: 271 ATAVSAFNNVDLEF-------------DEIFPWLEENI-------PVEYKRLDDIYRAYY 310
Query: 607 CLGNSDLMHQYIMRTQQMPLYVY 629
LG +D+ + I++TQ L VY
Sbjct: 311 WLGKADIFRKRIIKTQHWRLLVY 333
>gi|336260371|ref|XP_003344981.1| hypothetical protein SMAC_06758 [Sordaria macrospora k-hell]
gi|380095054|emb|CCC07556.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1075
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 101/216 (46%), Gaps = 41/216 (18%)
Query: 301 KKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDV 360
+K + G + +++ GPPG+GKTT AH+AAK GY V+E NASD RS +EN + DV
Sbjct: 518 QKRGADGSGGSRAIIISGPPGIGKTTAAHLAAKLEGYDVIESNASDTRSKKLVENGVSDV 577
Query: 361 VQMNSVM-----------ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKE 409
+ S++ A + L++DE+DG +G V + K
Sbjct: 578 MTNTSLLGFFAGDGKQVDAGKKKIVLIMDEVDGMSAGDRGGVGALAKF------------ 625
Query: 410 NVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVS 469
C+K + P+I ICN+ P ++ +A F +P+V ++ S
Sbjct: 626 ----------------CRKTEV--PLILICNERRLPKMKPFDHVAFDIKFQRPTVDQIRS 667
Query: 470 RLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
R+ IC+ E +K + L E + DIR +N +
Sbjct: 668 RIMTICHREGLKIPPPVVNALIEGSGKDIRQIINMI 703
>gi|379005451|ref|YP_005261123.1| ATPase related to the helicase subunit of the Holliday junction
resolvase [Pyrobaculum oguniense TE7]
gi|375160904|gb|AFA40516.1| ATPase related to the helicase subunit of the Holliday junction
resolvase [Pyrobaculum oguniense TE7]
Length = 422
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 162/359 (45%), Gaps = 69/359 (19%)
Query: 299 WHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKIL 358
W KK + + + +LL GPPG+GKTTL H A+ GY ++E+NASD R++ ++ +
Sbjct: 45 WAKK-KDKEILDARAVLLAGPPGVGKTTLVHALAREIGYELIELNASDVRTAERLKEVVG 103
Query: 359 DVVQMNSVMADSRPKCLVIDEIDGA-LGDGKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
++ S+ K ++ DE+DG + + G +E I++++ +
Sbjct: 104 RGLREGSLFGYG-GKIVLFDEVDGLHVKEDAGGLEAIIEIIENSKV-------------- 148
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
P++ N+ Y P R LR I+ V + S VV L+ IC +
Sbjct: 149 ----------------PIVMTANNPYDPRFRPLRDISLVVNLKRLSEEEVVEVLRRICTS 192
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQ-FLDKKKEILNVMDIGSQVVGRKDMSRSAFD 536
E K AL ++A+ + D+R+ +N LQ +L ++ L V DI + VG ++ S F+
Sbjct: 193 EGAKCEEEALRSIAKSSLGDLRAAINDLQMYLSGGRKTLTVDDI--KRVGERNPQLSMFE 250
Query: 537 IWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISN-RGDYDVIFDGIHENILQLQYHD 595
I +++ R FD ++ N D++ F E I
Sbjct: 251 ILDRVYRAR-----------------WFDEARAISFNPSFDWEQYFIWATETI------- 286
Query: 596 PVMLKTVKCL----DCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQ-KPNL 649
PV+ K V+ + D L +D+ I RTQ+ L Y LA+ VSQI+ KP L
Sbjct: 287 PVVYKEVETMSVAYDRLSKADMFIGRIKRTQEWELLPYALELALGG---VSQIKNKPRL 342
>gi|358056932|dbj|GAA97282.1| hypothetical protein E5Q_03960 [Mixia osmundae IAM 14324]
Length = 932
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 104/234 (44%), Gaps = 47/234 (20%)
Query: 285 LEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNA 344
LE ++N K S KK G + +++ GPPG+GKTT AHV A CGY+VVE+NA
Sbjct: 380 LETFDTNRK----SGFKKPGKDGMGVSRAVMISGPPGIGKTTAAHVVANACGYNVVELNA 435
Query: 345 SDDRS--------SSTIENKILDVVQMNSVM-----ADSRPKCLVIDEIDGALGDGKGAV 391
SD RS STI N LD + A + CLV+DE+DG G +G V
Sbjct: 436 SDTRSKKLLQTAFKSTITNTSLDGYFGEGRLNLNGDAITDKTCLVLDEVDGMSGGDRGGV 495
Query: 392 EVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLR 451
+ + KK + P+ICI ND + +R +
Sbjct: 496 GALNDFI----------------------------KKTKI--PIICIANDAKSQKMRPFQ 525
Query: 452 QIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
F +P+ + SR+ IC E +K S+ + LA + DIR +N L
Sbjct: 526 ATCHSLPFRRPTAVELRSRMMSICYKEKLKVSAEVVEQLASGAQSDIRQIINML 579
>gi|336471480|gb|EGO59641.1| hypothetical protein NEUTE1DRAFT_61242 [Neurospora tetrasperma FGSC
2508]
gi|350292581|gb|EGZ73776.1| P-loop containing nucleoside triphosphate hydrolase protein
[Neurospora tetrasperma FGSC 2509]
Length = 764
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 120/241 (49%), Gaps = 28/241 (11%)
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV-- 366
P +K+L+L GPPGLGKTTLAHV A+ GY V+E+NASD+RS ++ +I + SV
Sbjct: 51 PHRKILMLTGPPGLGKTTLAHVCARQAGYEVMEINASDERSKDVVKGRIRTSLGTESVKT 110
Query: 367 MADSRPKCLVIDEI----------------DGALGDGKGAVEVILKMVSAERKSNTAKEN 410
+ + +P+ +I G V+ ++ +V ++K+++
Sbjct: 111 VENKKPETGKQQKIARPVCVVVDEVDGVVSGSGGSGEGGFVKALIDLVLLDQKNSSGAGA 170
Query: 411 VAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQ--IAKVHVFIQPSVSRVV 468
+ + KKK +RP+I ICND+Y P+LR LRQ +A++ +PSV VV
Sbjct: 171 TSAAGR-----KKKKGDDFRQMRPLILICNDVYHPSLRPLRQSGLAEIIHVGKPSVEAVV 225
Query: 469 SRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKE--ILNVMDIGSQVVG 526
+RLK + E + A L E + S ++ + + E + +M +G V G
Sbjct: 226 TRLKTVFEKEGIPCEKDAARKLCE-AAWGMTSGIDAKRGAEGNAEGDLRGIMVVGEWVAG 284
Query: 527 R 527
R
Sbjct: 285 R 285
>gi|346326610|gb|EGX96206.1| DNA replication factor C subunit Rfc1, putative [Cordyceps
militaris CM01]
Length = 1028
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 103/216 (47%), Gaps = 41/216 (18%)
Query: 301 KKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDV 360
+K + G ++ +++ GPPG+GKTT AH+AAK GY V+E NASD RS +E + DV
Sbjct: 491 QKRGADGLGGERAIIISGPPGIGKTTAAHLAAKLEGYDVLESNASDARSKKLVETGVSDV 550
Query: 361 VQMNSVMA---------DSRPK--CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKE 409
+ S++ D+ K L++DE+DG G +G V + K
Sbjct: 551 MNNTSLLGFFAGDGKNVDTTKKKIVLIMDEVDGMSGGDRGGVGAMAKF------------ 598
Query: 410 NVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVS 469
CKK + P+I ICN+ P ++ +A F +P+V +V S
Sbjct: 599 ----------------CKKTEV--PLILICNERRLPKMKPFDHVAFDVRFNRPTVEQVRS 640
Query: 470 RLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
R+ IC+ E +K + L E + DIR +N +
Sbjct: 641 RIMTICHREGLKLPPPVVDALIEGSNKDIRQIINMI 676
>gi|119872171|ref|YP_930178.1| replication factor C large subunit [Pyrobaculum islandicum DSM
4184]
gi|150415668|sp|A1RSA3.1|RFCL_PYRIL RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|119673579|gb|ABL87835.1| replication factor C large subunit [Pyrobaculum islandicum DSM
4184]
Length = 423
Score = 103 bits (258), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 161/354 (45%), Gaps = 59/354 (16%)
Query: 299 WHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKIL 358
W KK + E K +LL GPPG+GKTT+ H A+ Y ++E+NASD R+ I+ +
Sbjct: 45 WAKK-KDKEIVEAKAVLLAGPPGIGKTTIVHALAREIKYELIELNASDVRTGERIKQVVG 103
Query: 359 DVVQMNSVMADSRPKCLVIDEIDGA-LGDGKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
++ S+ K ++ DE+DG + + G +E I++++ +AK
Sbjct: 104 RGLREASLFG-YEGKLVLFDEVDGLHVKEDLGGLETIVEII-----------EIAKV--- 148
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
PVI N+ Y P R LR IA V + S VV L+ IC N
Sbjct: 149 ----------------PVIMTANNPYDPKFRPLRDIALVINLKRLSEDDVVEVLRRICAN 192
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQ-FLDKKKEILNVMDIGSQVVGRKDMSRSAFD 536
E K AL ++A+ + D+R+ +N LQ +L K+IL V DI + VG ++ S F+
Sbjct: 193 EGAKCEEEALRSIAKSSLGDLRAAINDLQMYLSSGKKILTVDDI--KRVGERNPQLSMFE 250
Query: 537 IWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDP 596
I +++ R R ++S + + E FL +L + Y D
Sbjct: 251 ILDRVYRARWFDEAR-AISFNPSFDWEQYFLWAL----------------ETIPTVYKDL 293
Query: 597 VMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQ-KPNL 649
++ D L +D+ I +TQ+ L Y L++ +SQ++ KP L
Sbjct: 294 ELMAI--AYDRLSKADMFLGRIKKTQEWELLPYALELSLGG---ISQVKNKPRL 342
>gi|342879796|gb|EGU81031.1| hypothetical protein FOXB_08440 [Fusarium oxysporum Fo5176]
Length = 1058
Score = 103 bits (258), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 98/206 (47%), Gaps = 41/206 (19%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM--- 367
++ +++ GPPG+GKTT AH+AAK GY V+E NASD RS +EN + DV+ S++
Sbjct: 496 ERAIIISGPPGIGKTTAAHLAAKLEGYDVLESNASDTRSKKLVENGVSDVMNNTSLLGYF 555
Query: 368 --------ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEK 419
A + L++DE+DG +G V + K
Sbjct: 556 AGDGKDVDATKKKIVLIMDEVDGMSAGDRGGVGALAKF---------------------- 593
Query: 420 ISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNES 479
CKK + P+I ICN+ P ++ +A F +P+V +V SR+ IC+ E
Sbjct: 594 ------CKKTQV--PLILICNERRLPKMKPFDHVAFDIRFNRPTVDQVRSRVMTICHREG 645
Query: 480 MKTSSIALTTLAEYTECDIRSCLNTL 505
+K + L E + DIR +N +
Sbjct: 646 LKLPPSVVDALIEGSNKDIRQIINMI 671
>gi|164424374|ref|XP_962471.2| hypothetical protein NCU07313 [Neurospora crassa OR74A]
gi|157070486|gb|EAA33235.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 849
Score = 103 bits (258), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 120/241 (49%), Gaps = 28/241 (11%)
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV-- 366
P +K+L+L GPPGLGKTTLAHV A+ GY V+E+NASDDRS ++ +I + SV
Sbjct: 135 PHRKILMLTGPPGLGKTTLAHVCARQAGYEVLEINASDDRSKDVVKGRIRTSLGTESVKT 194
Query: 367 MADSRPKCLVIDEI----------------DGALGDGKGAVEVILKMVSAERKSNTAKEN 410
+ + +P+ +I G V+ ++ +V ++K+++
Sbjct: 195 VENKKPETGKQQKIARPVCVVVDEVDGVVSGSGGSGEGGFVKALIDLVLLDQKNSSGAGA 254
Query: 411 VAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQ--IAKVHVFIQPSVSRVV 468
+ + KKK +RP+I ICND+Y P+LR LRQ +A++ +PSV VV
Sbjct: 255 SSAAGR-----KKKKGDDFRQMRPLILICNDVYHPSLRPLRQSGLAEIIHVGKPSVEAVV 309
Query: 469 SRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKE--ILNVMDIGSQVVG 526
+RLK + E + A L E + S ++ + + E + +M +G V G
Sbjct: 310 TRLKTVFEKEGIPCEKDAARKLCE-AAWGMTSGIDAKRGAEGNAEGDLRGIMVVGEWVAG 368
Query: 527 R 527
R
Sbjct: 369 R 369
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRS 239
LW +KY +F +L+ D+ TNR+VL WLK+WD VF ++S
Sbjct: 73 LWTEKYRARTFMDLVGDDLTNRQVLRWLKRWDPIVFPHSVKS 114
>gi|403337686|gb|EJY68066.1| BRCT domain containing protein [Oxytricha trifallax]
Length = 1292
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 137/337 (40%), Gaps = 108/337 (32%)
Query: 193 VVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHS 252
+V +++W D YAP S +L+ ++ ++ WLK WD
Sbjct: 628 MVGKEMWTDLYAPQSVRDLVGNQGVIDQLYEWLKDWDDV--------------------- 666
Query: 253 TISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQK 312
+ NKKQ RG W + L N+ +
Sbjct: 667 HVRGNKKQ-----VHPRRGQSWQD--------LPKVNATA-------------------- 693
Query: 313 VLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVV----------- 361
+LL GPPG+GKT+ A + K G+ V+E NASD R+ ++I N +L V+
Sbjct: 694 -VLLSGPPGIGKTSSARIVCKQLGFEVLETNASDTRNKNSINN-MLQVLSSNKSIDYFSV 751
Query: 362 ------QMNSVMADS-----RPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKEN 410
Q N V +DS + +++DE+DG +G ++ +++++
Sbjct: 752 AGIKKQQANPVSSDSAGQQTKKSVIIMDEVDGVGAGDRGGLQALIQVI------------ 799
Query: 411 VAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSR 470
K++K P+ICICND L+SL F +PS + + R
Sbjct: 800 --------KLTKT----------PIICICNDRQNRKLQSLLNYCYDLKFNRPSQNEIAKR 841
Query: 471 LKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQF 507
++ IC +E ++ + + + E + DIR +N LQ
Sbjct: 842 VQLICQSEGLQIDNNTINKIIESSGSDIRQIVNILQM 878
>gi|148643237|ref|YP_001273750.1| replication factor C large subunit [Methanobrevibacter smithii ATCC
35061]
gi|158513781|sp|A5UMF4.1|RFCL_METS3 RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|148552254|gb|ABQ87382.1| replication factor C, large subunit, RfcL [Methanobrevibacter
smithii ATCC 35061]
Length = 492
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 115/236 (48%), Gaps = 41/236 (17%)
Query: 289 NSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDR 348
N+ K + W ++ P QK LLL GPPG+GKTTLA A+ + +E+NASD R
Sbjct: 18 NNKEKALIQKWVDNWKAGNP--QKPLLLVGPPGIGKTTLAQAIAREFSEY-IELNASDKR 74
Query: 349 SSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTA 407
S I++ I + S+ D K L++DE+DG G + +G V I ++
Sbjct: 75 SQDVIKSTIGESSSSKSLFGDDY-KLLILDEVDGIHGTNDRGGVRAIGDII--------- 124
Query: 408 KENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLR---QIAKVHVFIQPSV 464
KKA P+I I ND Y+ + SL+ + K+ PS+
Sbjct: 125 -------------------KKAK--HPMILIANDFYSKRIASLKTKCDVLKMSKVRSPSI 163
Query: 465 SRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDI 520
+++ LK I NE +K + AL LA+ + D+RS +NT Q L + E+L + DI
Sbjct: 164 NKL---LKQIAINEGIKANPAALKELAKKSNGDMRSAINTFQALANQNEVLELSDI 216
>gi|322705232|gb|EFY96819.1| putative replication factor C protein [Metarhizium anisopliae ARSEF
23]
Length = 1030
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 98/206 (47%), Gaps = 41/206 (19%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM--- 367
++ +++ GPPG+GKTT AH+AAK GY V+E NASD RS +EN + DV+ S++
Sbjct: 502 ERAIIISGPPGIGKTTAAHLAAKLEGYDVLESNASDVRSKKLVENGVSDVMNNTSLLGYF 561
Query: 368 --------ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEK 419
A + LV+DE+DG +G V + K
Sbjct: 562 AGDGKSVDAAKKKIVLVMDEVDGMSAGDRGGVGALAKF---------------------- 599
Query: 420 ISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNES 479
CKK + P+I ICN+ P ++ +A F +P+V +V SR+ IC+ E
Sbjct: 600 ------CKKTEV--PLILICNERRLPKMKPFDHVAFDIRFNRPTVDQVRSRIMTICHREG 651
Query: 480 MKTSSIALTTLAEYTECDIRSCLNTL 505
+K + L E + DIR +N +
Sbjct: 652 LKLPPPVVDALIEGSNKDIRQIINMI 677
>gi|391342732|ref|XP_003745669.1| PREDICTED: replication factor C subunit 1 [Metaseiulus
occidentalis]
Length = 906
Score = 103 bits (257), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 132/285 (46%), Gaps = 55/285 (19%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQ---MNSVMA 368
+ LL GPPG+GKTT AH+ K G+ ++E+NASD RS +++ ++ ++ +NS A
Sbjct: 453 RAALLSGPPGVGKTTSAHLVCKELGFEIIEMNASDTRSKRSLKEEVATLLSNRTLNSTNA 512
Query: 369 DSRPKCLVIDEIDGALGD-GKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCK 427
R L++DE+DG G+ +G ++ +++++
Sbjct: 513 -KRKHVLIMDEVDGMSGNQDRGGMQELIQLI----------------------------- 542
Query: 428 KASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIAL 487
K+S++ P+ICICND P +RSL F +P V ++ + L +C E +K +
Sbjct: 543 KSSMV-PIICICNDRTHPKMRSLVNYCFDLRFYKPQVKQIQAALMSLCFKEGVKVPPKTI 601
Query: 488 TTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKT 547
+ + DIR C+++L + D S+ KD+ FD+ K+
Sbjct: 602 EEIIVASNQDIRQCVHSLNLF------CAINDSSSKQQVTKDVKIGPFDVVKKFL----- 650
Query: 548 KRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQ 592
VSS N + SL N DY+ + + EN +++Q
Sbjct: 651 ------VSSEGGSLN-LNERQSLFFN--DYNAVPLFVQENYIKVQ 686
>gi|400600327|gb|EJP68001.1| replication factor RFC1 C terminal domain-containing protein
[Beauveria bassiana ARSEF 2860]
Length = 1026
Score = 103 bits (257), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 101/216 (46%), Gaps = 41/216 (18%)
Query: 301 KKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDV 360
+K + G ++ +++ GPPG+GKTT AH+AAK GY V+E NASD RS +E + DV
Sbjct: 489 QKRGADGMGGERAIIISGPPGIGKTTAAHLAAKLEGYDVLESNASDARSKRLVEAGVTDV 548
Query: 361 VQMNSVMA-----------DSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKE 409
+ S++ + L++DE+DG G +G V + K
Sbjct: 549 MNNTSLLGFFAGDGKSVDITKKKIVLIMDEVDGMSGGDRGGVGAMAKF------------ 596
Query: 410 NVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVS 469
CKK + P+I ICN+ P ++ +A F +P+V +V S
Sbjct: 597 ----------------CKKTEI--PLILICNERRLPKMKPFDHVAFDVRFNRPTVDQVRS 638
Query: 470 RLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
R+ IC+ E +K + L E + DIR +N +
Sbjct: 639 RIMTICHREGLKLPPPVVDALIEGSNKDIRQIINMI 674
>gi|18312141|ref|NP_558808.1| replication factor C large subunit [Pyrobaculum aerophilum str.
IM2]
gi|42559512|sp|Q8ZYK3.1|RFCL_PYRAE RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|18159574|gb|AAL62990.1| replication factor C large subunit [Pyrobaculum aerophilum str.
IM2]
Length = 422
Score = 103 bits (257), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 158/354 (44%), Gaps = 59/354 (16%)
Query: 299 WHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKIL 358
W KK R E K +LL GPPG+GKTTL H A+ Y ++E+NASD R++ + I
Sbjct: 45 WAKK-RDKEVAEAKAILLAGPPGVGKTTLVHALAREIRYELIELNASDVRTADRLRQVIG 103
Query: 359 DVVQMNSVMADSRPKCLVIDEIDGA-LGDGKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
++ +S+ K ++ DE+DG + + KG + TAK
Sbjct: 104 RGLRESSLFG-FEGKMVLFDEVDGLHVKEDKGG------LEEIIEIIETAKI-------- 148
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
P+I N+ Y P R LR I+ V + S VV L+ IC +
Sbjct: 149 ----------------PIIMTANNPYDPKFRPLRDISLVVNLKRLSEEEVVEVLRRICTS 192
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQ-FLDKKKEILNVMDIGSQVVGRKDMSRSAFD 536
E K AL ++A+ + D+R+ +N LQ +L + IL + DI + VG ++ S F+
Sbjct: 193 EGAKCEEEALRSIAKSSMGDLRAAINDLQMYLSGGRRILTLDDI--KRVGERNPQLSMFE 250
Query: 537 IWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDP 596
I +++ R R +VS + + E F+ +L S + + Y D
Sbjct: 251 ILDRVYKARWFDEAR-AVSFNPSFDWEQYFIWALES----------------IPVVYKDL 293
Query: 597 VMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQ-KPNL 649
+ T D L +D+ I RTQ+ L Y LA+ VSQI+ KP L
Sbjct: 294 EIAST--AYDRLSKADVFMGRIKRTQEWELLPYALELALGG---VSQIKGKPRL 342
>gi|330792427|ref|XP_003284290.1| hypothetical protein DICPUDRAFT_96642 [Dictyostelium purpureum]
gi|325085743|gb|EGC39144.1| hypothetical protein DICPUDRAFT_96642 [Dictyostelium purpureum]
Length = 1334
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 146/303 (48%), Gaps = 60/303 (19%)
Query: 299 WHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKIL 358
W++K + P ++ +LL GPPG+GKT+ A + K G+ +E+NASD RS S IE ++L
Sbjct: 816 WNQK-QPKDPNKRNAVLLSGPPGIGKTSAAILLCKLKGFEPIELNASDTRSKSEIE-RVL 873
Query: 359 DVVQMNSVMAD---SRP------KCLVIDEIDGALGDG-KGAVEVILKMVSAERKSNTAK 408
N +++ ++P +++DEIDG+ G+ +G + I++++
Sbjct: 874 KGASDNQNISNFFSAQPTEKKKINAIILDEIDGSSGNSDRGGIAEIIQLI---------- 923
Query: 409 ENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVV 468
KK+ + P ICICND Y+ ++SL+ +P+ ++V
Sbjct: 924 ------------------KKSKV--PFICICNDYYSNKIKSLKNYCMDLRLKRPTAAQVT 963
Query: 469 SRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRK 528
+R+ I +E MK ++ + + T DIR +NTLQ L + K+ + I + + K
Sbjct: 964 TRILQIAKHEDMKVTNYMVEKIFVSTHSDIRQTINTLQMLARSKKSYDNFTI-EKAIESK 1022
Query: 529 DMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENI 588
D + F + +F+ +S+ +++ + ++ S D+ ++ + EN
Sbjct: 1023 DFDITPFSAVELLFK-----------TSNGDINTQLEYFFS------DFSLVPLLVQENY 1065
Query: 589 LQL 591
L +
Sbjct: 1066 LSI 1068
>gi|261349970|ref|ZP_05975387.1| replication factor C large subunit [Methanobrevibacter smithii DSM
2374]
gi|288860753|gb|EFC93051.1| replication factor C large subunit [Methanobrevibacter smithii DSM
2374]
Length = 492
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 115/236 (48%), Gaps = 41/236 (17%)
Query: 289 NSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDR 348
N+ K + W ++ P QK LLL GPPG+GKTTLA A+ + +E+NASD R
Sbjct: 18 NNKEKALIQKWVDNWKAGNP--QKPLLLVGPPGIGKTTLAQAIAREFSEY-IELNASDKR 74
Query: 349 SSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTA 407
S I++ I + S+ D K L++DE+DG G + +G V I ++
Sbjct: 75 SQDVIKSTIGESSSSKSLFGDDY-KLLILDEVDGIHGTNDRGGVRAIGDII--------- 124
Query: 408 KENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLR---QIAKVHVFIQPSV 464
KKA P+I I ND Y+ + SL+ + K+ PS+
Sbjct: 125 -------------------KKAK--HPMILIANDFYSKRIASLKTKCDVLKMSKVRSPSI 163
Query: 465 SRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDI 520
+++ LK I NE +K + AL LA+ + D+RS +NT Q L + E+L + DI
Sbjct: 164 NKL---LKQIAINEGIKANPAALKELAKKSNGDMRSAINTFQALANQNEVLELNDI 216
>gi|320170447|gb|EFW47346.1| replication factor C subunit 1 [Capsaspora owczarzaki ATCC 30864]
Length = 1056
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 115/460 (25%), Positives = 188/460 (40%), Gaps = 85/460 (18%)
Query: 310 EQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMAD 369
E K LL GPPG+GKTT AH+ A+ CG+ +E NASD RS + + + + + +S MA+
Sbjct: 528 EFKAALLSGPPGIGKTTAAHIVARECGFEPIEFNASDVRSKKALRSVVSESMGSHS-MAE 586
Query: 370 ---SRPK---------------CLVIDEIDG-ALGDGKGAVEVILKMVSAERKSNTAKEN 410
RPK L++DE+DG + GD G E+ L + SA
Sbjct: 587 YFGGRPKSSQASANGGERQVKHVLIMDEVDGMSSGDLGGVGELNLLIRSA---------- 636
Query: 411 VAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSR 470
+ PVICICND + LR+L + F +P+ ++ R
Sbjct: 637 ---------------------MVPVICICNDRFNRKLRTLGENCYDLKFDRPTPLQITGR 675
Query: 471 LKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVV----- 525
L + E ++ A + LA+ T DIR CLN L + NV G+ +
Sbjct: 676 LLSVAAREGIQLDPAAASHLAQATNSDIRQCLNLLSLWRRNG---NVKISGASAMEEMKN 732
Query: 526 GRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIH 585
KDM+ + FD +++ + + + + F H L+ +F +
Sbjct: 733 ATKDMTVNTFDAARQLLSAPPAAAPSANGAKLDPLYDLFFVDHELMP-------LF--VQ 783
Query: 586 ENIL----QLQYHDPV--MLKTVKCLDCLGNSDLMHQYIMRTQQMPLY-VYQPPLAITVH 638
N L Q DPV + + D + SDL+ I + Q L + ++
Sbjct: 784 SNYLGITPQKSRGDPVRELDLMAEAADSISQSDLVGTAIRKKQLWALLQAFGTFSSVVPA 843
Query: 639 RLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLL 698
RLV P ++ ++ Y ++ S I H+ S D + +L
Sbjct: 844 RLVQGGIPPFGQF--TFPTYLGKTSRINGQLRALSS-----IQAHMRL-SASGDRTATVL 895
Query: 699 HILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKN 738
H P L L+ +E++ + +++S M +Y L+ N
Sbjct: 896 HYA--PVLLDSLTSPLAVREQDAIPEVISRMETYCLSRDN 933
>gi|333987925|ref|YP_004520532.1| replication factor C large subunit [Methanobacterium sp. SWAN-1]
gi|333826069|gb|AEG18731.1| Replication factor C large subunit [Methanobacterium sp. SWAN-1]
Length = 508
Score = 103 bits (256), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 123/248 (49%), Gaps = 34/248 (13%)
Query: 307 GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV 366
G P QK LLL GPPG GKTT+AH+AAK VE+NASD RS I+N I + S+
Sbjct: 35 GNP-QKCLLLVGPPGTGKTTMAHLAAKEFS-EFVELNASDKRSYDIIKNTIGESALSRSL 92
Query: 367 MADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGC 426
+ K +++DE+DG G + +R A N+ K+ +
Sbjct: 93 FGEG-LKLIILDEVDGIHG-------------TEDRGGTRAIGNIIKDGK---------- 128
Query: 427 KKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIA 486
P+I + ND Y+ L SL+ V + + +V+ LK IC E ++
Sbjct: 129 ------HPLIMMANDPYSKRLTSLKTKCNVIKLRKVHTNSIVALLKKICVKEKIEFEEHV 182
Query: 487 LTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRK 546
L TLA+ ++ D+RS +N L+ + K+ + D+ +++G+KD + FD + + + R
Sbjct: 183 LRTLAKQSKGDLRSAINDLEAIAAGKKKVTSEDL--ELIGKKDEIVNIFDSVRTVLKSRN 240
Query: 547 TKRLRNSV 554
+++++
Sbjct: 241 IHHIKDAM 248
>gi|310794495|gb|EFQ29956.1| replication factor RFC1 C terminal domain-containing protein
[Glomerella graminicola M1.001]
Length = 1026
Score = 103 bits (256), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 41/205 (20%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA--- 368
+ +++ GPPG+GKTT AH+AAK G+ V+E NASD RS +EN + DV+ S++
Sbjct: 500 RAIIISGPPGIGKTTAAHLAAKLAGFDVIESNASDTRSKKLVENGVSDVMNNTSLLGFFA 559
Query: 369 ------DSRPK--CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
D K L++DE+DG +G V + K
Sbjct: 560 GDGKKVDGEKKNIVLIMDEVDGMSAGDRGGVGALAKF----------------------- 596
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
CKK + P+I +CN+ P ++ +A F +P+V +V SR+ IC+ E +
Sbjct: 597 -----CKKTEI--PLILVCNERKLPKMKPFDFVAMDVPFRRPTVEQVRSRIMTICHREGL 649
Query: 481 KTSSIALTTLAEYTECDIRSCLNTL 505
K + L E + DIR +N +
Sbjct: 650 KLPVPVVDALIEGSNKDIRQIINMI 674
>gi|325188879|emb|CCA23408.1| replication factor C subunit putative [Albugo laibachii Nc14]
Length = 774
Score = 103 bits (256), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 152/348 (43%), Gaps = 75/348 (21%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVV--------QM 363
K +LL GPPG+GKTT+A + +KHCG+ +E NASD RS ++ + D++
Sbjct: 265 KCILLSGPPGIGKTTIATLVSKHCGFECIEFNASDTRSKKILKATLGDILGSQALNMHSS 324
Query: 364 NSVMADSRP------KCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
N+ +SR + +++DE+DG G +G +++++ +KS T
Sbjct: 325 NTRKINSRSAIQLSRRVVIMDEVDGMSGGDRGGTAELIQLI---KKSKT----------- 370
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
PVICICND + +RSL + +P+ +++V RL I
Sbjct: 371 ----------------PVICICNDRQSTKVRSLANHSYDLRMRRPTKTQIVKRLLEIGTE 414
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMD----IGSQVVGRKDMSR- 532
E ++ A+ E DIR L +Q K K + N + +G Q + D+ R
Sbjct: 415 EGLQIEKNAMEEAVERCGNDIRQSLMQMQ---KWKMVTNKVTYADLVGQQPHEKDDVLRL 471
Query: 533 SAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQ-- 590
+ F ++IFQ+ + R NE F+ DYD++ I EN +Q
Sbjct: 472 NPFSATQQIFQQNLSFAKR----------NEAYFV--------DYDLLPLMIEENYVQSI 513
Query: 591 ---LQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAI 635
+ D + +K + D++ +Y+ Q+ L Q L +
Sbjct: 514 MSTRKTSDEKLEAIMKAASFIAEGDIVSKYVRMQQRWDLLTKQAALNV 561
>gi|322695637|gb|EFY87442.1| putative replication factor C protein [Metarhizium acridum CQMa
102]
Length = 1062
Score = 103 bits (256), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 98/206 (47%), Gaps = 41/206 (19%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM--- 367
++ +++ GPPG+GKTT AH+AAK GY V+E NASD RS +EN + DV+ S++
Sbjct: 536 ERAIIISGPPGIGKTTAAHLAAKLEGYDVLESNASDVRSKKLVENGVSDVMNNTSLLGYF 595
Query: 368 --------ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEK 419
A + LV+DE+DG +G V + K
Sbjct: 596 AGDGKTVDAAKKKIVLVMDEVDGMSAGDRGGVGALAKF---------------------- 633
Query: 420 ISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNES 479
CKK + P+I ICN+ P ++ +A F +P+V +V SR+ IC+ E
Sbjct: 634 ------CKKTEV--PLILICNERRLPKMKPFDHVAFDIRFNRPTVDQVRSRIMTICHREG 685
Query: 480 MKTSSIALTTLAEYTECDIRSCLNTL 505
+K + L E + DIR +N +
Sbjct: 686 LKLPPAVVDALIEGSNKDIRQIINMI 711
>gi|325968176|ref|YP_004244368.1| ATPase AAA [Vulcanisaeta moutnovskia 768-28]
gi|323707379|gb|ADY00866.1| AAA ATPase central domain protein [Vulcanisaeta moutnovskia 768-28]
Length = 435
Score = 103 bits (256), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 153/350 (43%), Gaps = 66/350 (18%)
Query: 297 DSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENK 356
+SW K G P +K ++L G PG GKTTLA+ A GY V+E+NASD R+ I
Sbjct: 34 NSWEK-----GKPSRKAVMLVGSPGTGKTTLAYALANEKGYEVLELNASDVRTGERIRQI 88
Query: 357 ILDVVQMNSVMADSRPKCLVIDEIDGA-LGDGKGAVEVILKMVSAERKSNTAKENVAKED 415
I ++M S+ R + ++ DE+DG + + +G + I++++ R+S
Sbjct: 89 IGGSMKMGSLFG-FRGRIILFDEVDGLNVREDRGGLAAIVELI---RESTW--------- 135
Query: 416 QPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHIC 475
P+I N+ + P R LR A+V + +++ L+ IC
Sbjct: 136 ------------------PIIMTANNPWDPKFRELRDEAEVIQLKPLRENDILTILRRIC 177
Query: 476 NNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAF 535
NNE +K AL +AE + D+R+ +N LQ + K++L D+ V + F
Sbjct: 178 NNEGIKCEEDALKLIAEASGGDVRAAINDLQAAAEGKKVLTKDDV---TVTERAHQFDMF 234
Query: 536 DIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHD 595
+ ++F R+ R+ FL S D++ + +NI
Sbjct: 235 KVLDKVFHARRFDEARS-----------VTFLPSF-----DWENYYPWALDNI------P 272
Query: 596 PVMLKTVKCL----DCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLV 641
V K+++ + D L SD++ I +TQ+ L Y L LV
Sbjct: 273 SVYAKSIEAVSDAFDNLSLSDVVKGRITKTQEWELMPYMLELMTAGVALV 322
>gi|145590270|ref|YP_001152272.1| replication factor C large subunit [Pyrobaculum arsenaticum DSM
13514]
gi|158514159|sp|A4WGV3.1|RFCL_PYRAR RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|145282038|gb|ABP49620.1| AAA ATPase, central domain protein [Pyrobaculum arsenaticum DSM
13514]
Length = 422
Score = 103 bits (256), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 162/359 (45%), Gaps = 69/359 (19%)
Query: 299 WHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKIL 358
W KK + + + +LL GPPG+GKTTL H A+ GY ++E+NASD R++ ++ +
Sbjct: 45 WAKK-KDKEILDARAVLLAGPPGVGKTTLIHALAREIGYELIELNASDVRTAERLKEVVG 103
Query: 359 DVVQMNSVMADSRPKCLVIDEIDGA-LGDGKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
++ S+ K ++ DE+DG + + G +E I++++ +
Sbjct: 104 RGLREGSLFGYG-GKIVLFDEVDGLHVKEDAGGLEAIIEIIENSKV-------------- 148
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
P++ N+ Y P R LR I+ V + S VV L+ IC +
Sbjct: 149 ----------------PIVMTANNPYDPRFRPLRDISLVVNLKRLSEEEVVEVLRRICTS 192
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQ-FLDKKKEILNVMDIGSQVVGRKDMSRSAFD 536
E K AL ++A+ + D+R+ +N LQ +L ++ L V DI + VG ++ S F+
Sbjct: 193 EGAKCEEEALRSIAKSSLGDLRAAINDLQMYLSGGRKTLTVDDI--KRVGERNPQLSMFE 250
Query: 537 IWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISN-RGDYDVIFDGIHENILQLQYHD 595
I +++ R FD ++ N D++ F E I
Sbjct: 251 ILDRVYRAR-----------------WFDEARAISFNPSFDWEQYFIWATETI------- 286
Query: 596 PVMLKTVKCL----DCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQ-KPNL 649
PV+ K ++ + D L +D+ I RTQ+ L Y LA+ VSQI+ KP L
Sbjct: 287 PVVYKEIETMSVAYDRLSKADMFIGRIKRTQEWELLPYALELALGG---VSQIKSKPRL 342
>gi|66356684|ref|XP_625520.1| DNA replication repC1, AAA+ ATpase with a BRCT domain at the
N-terminus [Cryptosporidium parvum Iowa II]
gi|46226521|gb|EAK87515.1| DNA replication repC1, AAA+ ATpase with a BRCT domain at the
N-terminus [Cryptosporidium parvum Iowa II]
Length = 874
Score = 102 bits (255), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 142/359 (39%), Gaps = 102/359 (28%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LW D++ P S ++L + + +++ WL W S + +
Sbjct: 273 LWTDRHKPESLDQVLGNGEVIKKLQTWLSDW----------------------KSVVIEG 310
Query: 258 KKQN--DSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLL 315
KK+ +SF+ G+R+ + EN N++ L
Sbjct: 311 KKKAPPKASFSP---GSRFP----------QVENINARAA-------------------L 338
Query: 316 LCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPK-- 373
L GPPG+GK+T+A + AK CGY +E+NASDDR+ IEN V S+ +R
Sbjct: 339 LSGPPGIGKSTVATLIAKKCGYIPIEMNASDDRTKEVIENLSESAVGGFSLSTFARKSSS 398
Query: 374 --------------CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEK 419
L++DE+DG G +G + +++ R
Sbjct: 399 SSQFGEEGGLNTNMLLIMDEMDGLGGSDRGGAAALGRLIQKTR----------------- 441
Query: 420 ISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNES 479
P+ICICND + +R+L F +PS +++ R++ I N E
Sbjct: 442 -------------WPIICICNDRMSEKVRNLAPKCYDLRFSRPSKVQIIKRMQEIANKEG 488
Query: 480 MKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIW 538
MK A+ L E D+R LN LQ L + D+ +++ G + D++
Sbjct: 489 MKIEPNAIELLCESVGNDLRQILNELQLLSLSNINVRFSDVKTEISGHLKDVQVTLDVF 547
>gi|124027779|ref|YP_001013099.1| replication factor C large subunit [Hyperthermus butylicus DSM
5456]
gi|150415659|sp|A2BL93.1|RFCL_HYPBU RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|123978473|gb|ABM80754.1| Replication factor C large subunit [Hyperthermus butylicus DSM
5456]
Length = 484
Score = 102 bits (255), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 96/410 (23%), Positives = 175/410 (42%), Gaps = 65/410 (15%)
Query: 299 WHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKIL 358
W + PE+K L GP G+GKT+L AA G ++E+NASD R S IE +I
Sbjct: 32 WLRSWLQGRIPERKAALFYGPAGVGKTSLVEAAANEYGLELIEMNASDFRRKSDIE-RIA 90
Query: 359 DVVQMNSVMADSRPKCLVIDEIDGALGDG-KGAVEVILKMVSAERKSNTAKENVAKEDQP 417
+ + + K +++DE+DG G +G ++ IL+++ N+ K
Sbjct: 91 KIAATQFSLFGRKRKIILLDEVDGISGTADRGGLDAILELI-----------NITKH--- 136
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
P++ ND + L+ LR + + F + S VV LK IC
Sbjct: 137 ----------------PIVMTANDPWDQKLKPLRDASLMVPFYRLSERYVVQVLKRICAA 180
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
E+++ AL +A+ E D+RS +N LQ + + ++ V D+ ++ +D S +++
Sbjct: 181 ENIECEDEALKLIAQRAEGDLRSAINDLQAIAEGYGVVRV-DLVRALLATRDRQYSPWEM 239
Query: 538 WKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPV 597
+ +F + + + +V+ + DYD + I+ENI +QY P
Sbjct: 240 LRNLFMSKYIWQAKRAVTHTDL----------------DYDTLLQWINENI-AVQYTHPE 282
Query: 598 MLKTVKCLDCLGNSDLMHQYIMRTQQMPL--YVYQ---PPLAITVHRLVSQIQKPNLEWP 652
+ + L +D+ I R+ L YV+ P +A+ +K +W
Sbjct: 283 --DIWRAHEALARADIFLGRIKRSLSWDLLPYVFDLVGPGVALAR-------KKSKFKWA 333
Query: 653 KSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLST-ESLVEDSISPLLHIL 701
K + + K + + ++ L T ++ V+ + P L I+
Sbjct: 334 KYQFPQKILMLAKTKEVREIREAVAEVFAKRLHTSKATVKREVLPFLFII 383
>gi|171186450|ref|YP_001795369.1| replication factor C large subunit [Pyrobaculum neutrophilum
V24Sta]
gi|226739140|sp|B1YC69.1|RFCL_THENV RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|170935662|gb|ACB40923.1| AAA ATPase central domain protein [Pyrobaculum neutrophilum V24Sta]
Length = 422
Score = 102 bits (255), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 163/358 (45%), Gaps = 67/358 (18%)
Query: 299 WHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKIL 358
W KK R E K +LL GPPG+GKTT+ H A+ Y ++E+NASD R+ I+ +
Sbjct: 45 WAKK-REKEVAEAKAVLLAGPPGIGKTTVVHALAREIRYELIELNASDIRTGERIKLVVG 103
Query: 359 DVVQMNSVMADSRPKCLVIDEIDGA-LGDGKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
++ +S+ K ++ DE+DG + + +G +E I+++V TAK
Sbjct: 104 RGLKESSLFG-YEGKLVLFDEVDGLHVKEDEGGLEAIVEIV------ETAKV-------- 148
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
P++ N+ Y P R LR I+ V + S VV L+ IC
Sbjct: 149 ----------------PIVMTANNPYDPKFRPLRDISLVVNLKRLSEEEVVEVLRRICTA 192
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQ-FLDKKKEILNVMDIGSQVVGRKDMSRSAFD 536
E K AL ++A+ + D+R+ +N LQ +L ++ L V DI + VG ++ S F+
Sbjct: 193 EGAKCEEEALRSIAKSSLGDLRAAINDLQMYLSGGRKTLTVDDI--KRVGERNPQLSMFE 250
Query: 537 IWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDP 596
+ +++ R R +VS + + E FL +L E + P
Sbjct: 251 VLDRVYRARWFDEAR-AVSFNPSFDWEQYFLWAL---------------ETV-------P 287
Query: 597 VMLKTVK----CLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQ-KPNL 649
V+ K V+ D L +D+ I R Q+ L Y LA+ VSQ++ KP L
Sbjct: 288 VVYKDVETAAAAYDRLSKADMFLGRIKRMQEWELLPYALELALGG---VSQVKNKPRL 342
>gi|402076630|gb|EJT72053.1| replication factor C subunit 1 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 1081
Score = 102 bits (255), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 105/228 (46%), Gaps = 42/228 (18%)
Query: 301 KKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDV 360
KK + G ++ +++ GPPG+GKTT AH+AA+ GY V+E NASD RS +EN + DV
Sbjct: 517 KKRGADGMGGERAIIISGPPGIGKTTAAHMAARLAGYDVIESNASDTRSKKLVENGVSDV 576
Query: 361 VQMNSVMA---------DSRPK--CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKE 409
+ S++ D K L++DE+DG +G V + K
Sbjct: 577 INNTSLLGFFSGEGKKVDETKKNIVLIMDEVDGMSAGDRGGVGALAKF------------ 624
Query: 410 NVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVS 469
CKK+ + P+I ICN+ P ++ A F +P+V ++ S
Sbjct: 625 ----------------CKKSEV--PLILICNERRLPKMKPFDHAAFDIRFNRPTVEQIRS 666
Query: 470 RLKHICNNESM-KTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILN 516
R+ IC+ E + K + + L E DIR +N L + LN
Sbjct: 667 RIMTICHREGLGKMPAQVIDALIEGCNKDIRQIINMLHSIKLDGAALN 714
>gi|67611464|ref|XP_667157.1| replication factor C subunit 1 [Cryptosporidium hominis TU502]
gi|54658259|gb|EAL36923.1| replication factor C subunit 1 [Cryptosporidium hominis]
Length = 854
Score = 102 bits (255), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 138/347 (39%), Gaps = 102/347 (29%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LW D++ P S ++L + + +++ WL W S + +
Sbjct: 253 LWTDRHKPESLDQVLGNGEVIKKLQTWLSDW----------------------KSVVIEG 290
Query: 258 KKQN--DSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLL 315
KK+ +SF+ G+R+ + EN N++ L
Sbjct: 291 KKKAPPKASFSP---GSRFP----------QVENINARAA-------------------L 318
Query: 316 LCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPK-- 373
L GPPG+GK+T+A + AK CGY +E+NASDDR+ IEN V S+ +R
Sbjct: 319 LSGPPGIGKSTVATLIAKKCGYIPIEMNASDDRTKEVIENLSESAVGGFSLSTFARKSSS 378
Query: 374 --------------CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEK 419
L++DE+DG G +G + +++ R
Sbjct: 379 SSQFGEEGGLNTNMLLIMDEMDGLGGSDRGGAAALGRLIQRTR----------------- 421
Query: 420 ISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNES 479
P+ICICND + +R+L F +PS +++ R++ I N E
Sbjct: 422 -------------WPIICICNDRMSEKVRNLAPKCYDLRFSRPSKVQIIKRMQEIANKEG 468
Query: 480 MKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVG 526
MK A+ L E D+R LN LQ L + D+ +++ G
Sbjct: 469 MKIEPNAIELLCESVGNDLRQILNELQLLSLSNINVRFSDVKTEISG 515
>gi|357151909|ref|XP_003575946.1| PREDICTED: replication factor C subunit 1-like [Brachypodium
distachyon]
Length = 1048
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 158/384 (41%), Gaps = 112/384 (29%)
Query: 157 SEPIDVLLQKVEQ-EAFNKALNSSSEGQSDRSLPEKPVVHEQ---LWVDKYAPNSFTELL 212
S P+ V + V+Q NK++ S S +S + +K + ++ W +KY P +++
Sbjct: 391 SSPVKVERRAVDQVSTINKSIASKSNKESASTDYQKAKIVDRGALQWTEKYRPKVPNDIV 450
Query: 213 SDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGN 272
++ +++ WLK W+ HS +K +G
Sbjct: 451 GNQSMVKQLHDWLKSWEGQFL-----------------HSA-------------QKGKGK 480
Query: 273 RWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAA 332
+ +G + K +LL GPPG+GKTT A V +
Sbjct: 481 KQIDGGAK-------------------------------KAVLLSGPPGIGKTTTAKVVS 509
Query: 333 KHCGYHVVEVNASDDR--SSSTIENKI-------LDVVQMNSVM--ADSRPK----CLVI 377
+ G +EVNASD R + S IE + + V+ N+ + +D+R K LV+
Sbjct: 510 QMLGLQAIEVNASDSRGKADSKIEKGVGGSTSNSIKVLISNATLNYSDNRTKPPKAVLVM 569
Query: 378 DEIDG-ALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVI 436
DE+DG + GD G ++I + KISK P++
Sbjct: 570 DEVDGMSAGDRGGVADLIASI---------------------KISKI----------PIV 598
Query: 437 CICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTEC 496
CICND Y+ L+SL + F +P+ ++ RL I E ++ A+ LAE
Sbjct: 599 CICNDRYSQKLKSLVNYCLLLNFRKPTKQQMGKRLMDIARKEGIQAQENAMEELAERVHG 658
Query: 497 DIRSCLNTLQFLDKKKEILNVMDI 520
DIR LN LQ++ + ++ DI
Sbjct: 659 DIRMALNHLQYMSLSQSVVKYDDI 682
>gi|62472391|ref|NP_001014605.1| germ line transcription factor 1, isoform B [Drosophila
melanogaster]
gi|21483228|gb|AAM52589.1| AT18625p [Drosophila melanogaster]
gi|61679311|gb|AAX52937.1| germ line transcription factor 1, isoform B [Drosophila
melanogaster]
Length = 1008
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 137/319 (42%), Gaps = 59/319 (18%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRS--------SSTIENKILDVVQM 363
K LL GPPG+GKTT A + K G+ VE NASD RS S+ + NK L
Sbjct: 503 KAALLSGPPGIGKTTTATLVVKELGFDAVEFNASDTRSKRLLKDEVSTLLSNKSLSGYFT 562
Query: 364 NSVMADSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISK 422
A SR L++DE+DG G + +G ++ ++ ++
Sbjct: 563 GQGQAVSRKHVLIMDEVDGMAGNEDRGGMQELIALI------------------------ 598
Query: 423 KKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKT 482
K +S+ P+IC+CND P +RSL F +P + ++ ++ IC E +K
Sbjct: 599 ----KDSSI--PIICMCNDRNHPKIRSLVNYCYDLRFQRPRLEQIKGKIMSICFKEKVKI 652
Query: 483 SSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIF 542
S + + T DIR +N + L K+ + Q V KD+ +++ +++F
Sbjct: 653 SPAKVEEIIAATNNDIRQSINHIALLSAKE---DASQKSGQQVATKDLKLGPWEVVRKVF 709
Query: 543 QKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQL---QYHDPVML 599
+ K + S + S++ F H DY + + +N LQ+ V+
Sbjct: 710 TADEHKHM--SFADKSDL-----FFH-------DYSLAPLFVQQNYLQVLPQGNKKDVLA 755
Query: 600 KTVKCLDCLGNSDLMHQYI 618
K D L DL+ + I
Sbjct: 756 KVAATADALSLGDLVEKRI 774
>gi|390938547|ref|YP_006402285.1| AAA ATPase [Desulfurococcus fermentans DSM 16532]
gi|390191654|gb|AFL66710.1| AAA ATPase central domain protein [Desulfurococcus fermentans DSM
16532]
Length = 426
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 180/406 (44%), Gaps = 61/406 (15%)
Query: 298 SWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKI 357
SW K G P +K LL GPPG GKT+L A+ GY ++E+NASD R IE +I
Sbjct: 36 SWEK-----GKPSKKAALLHGPPGCGKTSLVEALARSKGYQLLEMNASDARRKEDIE-RI 89
Query: 358 LDVVQMNSVMADSRPKCLVIDEIDGA-LGDGKGAVEVILKMVSAERKSNTAKENVAKEDQ 416
+ + + + SR K +++DE+DG + G VE +++++
Sbjct: 90 VKLASRSGALTGSR-KIILLDEVDGMDVRADTGGVEALVEVI------------------ 130
Query: 417 PEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICN 476
K+S P+I N+ Y+ LR LR+++++ F + + V++ LK IC+
Sbjct: 131 --KVSAN----------PIIMTANNPYSQMLRPLRELSEMIAFKRLTPRDVITVLKRICS 178
Query: 477 NESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFD 536
E + AL +A+ +E D+RS +N L+ + E + + + S R D + + ++
Sbjct: 179 AEKLVCEDQALDEIAKRSEGDLRSAINDLEAMAGASERITLGLVKSFSTYR-DRTYAPYE 237
Query: 537 IWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDP 596
+++F R + R + +S+ +EF I+E+I Y D
Sbjct: 238 ALQKLFNSRYIFQAREAPTSTDLTPDEF----------------MVWINEHI-PTYYED- 279
Query: 597 VMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQ 656
+ + + D L +D+ I++T L Y L + + + W Q
Sbjct: 280 -LEEIARAYDALSRADVYMGRIIKTNSWDLLTYA--LDMMGPGVAFARKTYRYRWKPFKQ 336
Query: 657 RYRNAFMEKMDIFKSWHSKIPPYISRH-LSTESLVEDSISPLLHIL 701
R M + + + ++ H L+++S+V+ + P L ++
Sbjct: 337 PERIKLMSETKKSREIREALAEQLASHILASKSVVKSDVIPFLRVI 382
>gi|332796205|ref|YP_004457705.1| AAA ATPase [Acidianus hospitalis W1]
gi|332693940|gb|AEE93407.1| AAA ATPase central domain protein [Acidianus hospitalis W1]
Length = 450
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 158/360 (43%), Gaps = 64/360 (17%)
Query: 306 TGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNS 365
+G PE K LLL GPPG GKTTLA A G ++E+NASD R+ I+N I ++
Sbjct: 36 SGKPENKALLLYGPPGTGKTTLAQALAHDYGLELLEMNASDSRNLEAIKN-IAQRAAVSG 94
Query: 366 VMADSRPKCLVIDEIDG--ALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKK 423
+ ++ K + +DE+DG A D GA+ I ++V R
Sbjct: 95 SLFGTKGKLIFLDEVDGINARQD-MGAIPAIAELVQKTR--------------------- 132
Query: 424 KGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTS 483
PV+ ND + P+LR LR +AK+ + + L IC +E ++
Sbjct: 133 ---------YPVLLAANDPWDPSLRELRNLAKLVEVKKLGKYALRKILGKICTSEKLQCD 183
Query: 484 SIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQ 543
AL + E ++ D R +N L+ + + + V + + RK+ F+ + +F
Sbjct: 184 DDALDEIIEISDGDARYAINLLEATAEGFKKVTVESV-KEFARRKESELDPFETVRGVFW 242
Query: 544 KRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVK 603
+ + +N+V+SS + DYD++ ENI +QY + M +
Sbjct: 243 AKYAWQAKNAVTSS----------------QVDYDLLMKWFSENI-PVQYDN--MEDVYR 283
Query: 604 CLDCLGNSDL-MHQYIMRTQQMPLYVYQ---PPLAITVHRLVSQIQKPNLEWPKSYQRYR 659
D L + + + + + M Y + P +A+ ++I+K N W +++Y+
Sbjct: 284 AYDALAKASIFLSRAKTSSWDMLSYTFDMMGPGVAM------AEIEKQNPGWKPKWRKYQ 337
>gi|222445468|ref|ZP_03607983.1| hypothetical protein METSMIALI_01107 [Methanobrevibacter smithii
DSM 2375]
gi|222435033|gb|EEE42198.1| replication factor C large subunit [Methanobrevibacter smithii DSM
2375]
Length = 492
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 114/236 (48%), Gaps = 41/236 (17%)
Query: 289 NSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDR 348
N+ K + W + P QK LLL GPPG+GKTTLA A+ + +E+NASD R
Sbjct: 18 NNKEKALIQKWVDNWNAGNP--QKPLLLVGPPGIGKTTLAQAIAREFSEY-IELNASDKR 74
Query: 349 SSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTA 407
S I++ I + S+ D K L++DE+DG G + +G V I ++
Sbjct: 75 SQDVIKSTIGESSSSKSLFGDDY-KLLILDEVDGIHGTNDRGGVRAIGDII--------- 124
Query: 408 KENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLR---QIAKVHVFIQPSV 464
KKA P+I I ND Y+ + SL+ + K+ PS+
Sbjct: 125 -------------------KKAK--HPMILIANDFYSKRIASLKTKCDVLKMSKVRSPSI 163
Query: 465 SRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDI 520
+++ LK I NE +K + AL LA+ + D+RS +NT Q L + E+L + DI
Sbjct: 164 NKL---LKQIAINEGIKANPAALKELAKKSNGDMRSAINTFQALANQNEVLELSDI 216
>gi|367035834|ref|XP_003667199.1| hypothetical protein MYCTH_2312776 [Myceliophthora thermophila ATCC
42464]
gi|347014472|gb|AEO61954.1| hypothetical protein MYCTH_2312776 [Myceliophthora thermophila ATCC
42464]
Length = 945
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 94/205 (45%), Gaps = 41/205 (20%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA--- 368
+ +++ GPPG+GKTT AH+ AK GY V+E NASD RS +E + DV+ S+M
Sbjct: 515 RAIIISGPPGIGKTTAAHLVAKLEGYDVLESNASDTRSKKLVEGGVSDVLNNTSLMGYFA 574
Query: 369 --------DSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
+ LV+DE+DG +G V + K
Sbjct: 575 GDGKKVDVSKKKIVLVMDEVDGMSAGDRGGVGALAKF----------------------- 611
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
CKK + P+I ICN+ P ++ +A F +P+V ++ SR+ IC+ E +
Sbjct: 612 -----CKKTEV--PLILICNERRLPKMKPFDHVAFDIKFQRPTVDQIRSRIMTICHREGL 664
Query: 481 KTSSIALTTLAEYTECDIRSCLNTL 505
K + L E + DIR +N L
Sbjct: 665 KIPPQVINALIEGSGKDIRQIINML 689
>gi|449687719|ref|XP_004211521.1| PREDICTED: chromosome transmission fidelity protein 18 homolog
[Hydra magnipapillata]
Length = 370
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 108/436 (24%), Positives = 182/436 (41%), Gaps = 80/436 (18%)
Query: 524 VVGRKDMSRSAFDIWKEIFQ-----KRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYD 578
+G+KD+++ + I EIFQ K+K K SS++N S+ F + L+S + D
Sbjct: 2 TIGQKDLTKDSRRIVAEIFQLPHFNKKKLK------SSNTNSSSRFQNILQLVSGESELD 55
Query: 579 VIFDGIHENILQLQYHDPVMLKTVKC-LDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITV 637
I G+ ++ L + DP L+++ C D L +D + I Q+ Y L +
Sbjct: 56 KITQGLFDHYLNTKTKDPY-LESINCGCDWLEFTDFLENKISSQQEYVFLRYMTFLPVAF 114
Query: 638 HRLVSQIQKPNLEW-PKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISP 696
H ++ P + + +Y+ Y ++ + +P + + S + + D I P
Sbjct: 115 HMYYARSLSPKITYSATAYENYLKT-THNQQTYQMMVNGMPLQMRKDCSLNTGILDLI-P 172
Query: 697 LLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDV 756
L L+ P LRPV L S EK L L++ M+SY+LTY ++ V
Sbjct: 173 FLFCLTVPNLRPVNTQLYSESEKEMLQNLINIMISYNLTYHQERN-----------FEGV 221
Query: 757 STLSFDPPINEFITFKGYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKEN 816
T +P I E TF G H L A KQ++ E+E +++ +
Sbjct: 222 YTYQLEPNIEELTTFSGL-PQHRHLPYATKQLIAREIEMEKMRR---------------- 264
Query: 817 MDLAGEEDSKTESAKTNNAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVK 876
A+ + K + Q N T L +L ++S V
Sbjct: 265 ----------------------AECLTKPQGSINQIQAN---CTNLKSLSDVKASKIKVV 299
Query: 877 PKSSGDTKKSFRSSSSFFDRFRKLSGKVSQDNDNAVQKATVERDSLPLL------FKFNE 930
+ + +T R+ FF R ++ + NDN + +E+ L ++FNE
Sbjct: 300 KQQTSNT----RTQLDFFGR-TFVANSNLESNDNKEETLNIEQKQKTCLLNNTVFYRFNE 354
Query: 931 GFTNAVKRPVRMRDFL 946
GFTNAV+R V+ +FL
Sbjct: 355 GFTNAVRRTVKTHEFL 370
>gi|17737765|ref|NP_524229.1| germ line transcription factor 1, isoform A [Drosophila
melanogaster]
gi|12644230|sp|P35600.2|RFC1_DROME RecName: Full=Replication factor C subunit 1; AltName:
Full=Activator 1 140 kDa subunit; AltName:
Full=Activator 1 subunit 1; AltName: Full=Germline
transcription factor 1; AltName: Full=Replication factor
C large subunit
gi|2121267|gb|AAB58311.1| replication factor C large subunit [Drosophila melanogaster]
gi|7296805|gb|AAF52082.1| germ line transcription factor 1, isoform A [Drosophila
melanogaster]
gi|28317228|gb|AAO39621.1| GH06471p [Drosophila melanogaster]
Length = 986
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 137/319 (42%), Gaps = 59/319 (18%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRS--------SSTIENKILDVVQM 363
K LL GPPG+GKTT A + K G+ VE NASD RS S+ + NK L
Sbjct: 481 KAALLSGPPGIGKTTTATLVVKELGFDAVEFNASDTRSKRLLKDEVSTLLSNKSLSGYFT 540
Query: 364 NSVMADSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISK 422
A SR L++DE+DG G + +G ++ ++ ++
Sbjct: 541 GQGQAVSRKHVLIMDEVDGMAGNEDRGGMQELIALI------------------------ 576
Query: 423 KKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKT 482
K +S+ P+IC+CND P +RSL F +P + ++ ++ IC E +K
Sbjct: 577 ----KDSSI--PIICMCNDRNHPKIRSLVNYCYDLRFQRPRLEQIKGKIMSICFKEKVKI 630
Query: 483 SSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIF 542
S + + T DIR +N + L K+ + Q V KD+ +++ +++F
Sbjct: 631 SPAKVEEIIAATNNDIRQSINHIALLSAKE---DASQKSGQQVATKDLKLGPWEVVRKVF 687
Query: 543 QKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQL---QYHDPVML 599
+ K + S + S++ F H DY + + +N LQ+ V+
Sbjct: 688 TADEHKHM--SFADKSDL-----FFH-------DYSLAPLFVQQNYLQVLPQGNKKDVLA 733
Query: 600 KTVKCLDCLGNSDLMHQYI 618
K D L DL+ + I
Sbjct: 734 KVAATADALSLGDLVEKRI 752
>gi|367055380|ref|XP_003658068.1| hypothetical protein THITE_2124524 [Thielavia terrestris NRRL 8126]
gi|347005334|gb|AEO71732.1| hypothetical protein THITE_2124524 [Thielavia terrestris NRRL 8126]
Length = 1058
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 41/205 (20%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM---- 367
+ +++ GPPG+GKTT AH+AA+ GY V+E NASD RS +E+ + +V+ S++
Sbjct: 518 RAIIISGPPGIGKTTAAHLAARLEGYDVLESNASDTRSKKLVESGVGEVLNNTSLLGFFA 577
Query: 368 -------ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
A + LV+DE+DG +G V + K
Sbjct: 578 GDGKKVDASKKKIVLVMDEVDGMSAGDRGGVGALAKF----------------------- 614
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
CKK + P+I ICND P ++ +A F +P+V ++ SR+ IC+ E +
Sbjct: 615 -----CKKTDV--PLILICNDRRLPKMKPFDHVAFDIRFQRPTVDQIRSRIMTICHREGL 667
Query: 481 KTSSIALTTLAEYTECDIRSCLNTL 505
K + L E + DIR +N L
Sbjct: 668 KLPVPVVNALIEGSGRDIRQIINML 692
>gi|195054401|ref|XP_001994113.1| GH23049 [Drosophila grimshawi]
gi|193895983|gb|EDV94849.1| GH23049 [Drosophila grimshawi]
Length = 1008
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 137/320 (42%), Gaps = 60/320 (18%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRS--------SSTIENKILDVVQM 363
K LL GPPG+GKTT A + + G+ VE NASD RS +S + NK L
Sbjct: 505 KAALLSGPPGIGKTTTASLVTQELGFDAVEFNASDTRSKRLLKEEVASLLGNKSLYGYAN 564
Query: 364 NSVMADSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISK 422
A S+ L++DE+DG G + +G ++ ++ ++
Sbjct: 565 GQSQAVSKKHVLIMDEVDGMAGNEDRGGMQELIALI------------------------ 600
Query: 423 KKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKT 482
K +S+ P+IC+CND P +RSL F +P + ++ R+ IC E +K
Sbjct: 601 ----KDSSI--PIICMCNDRNHPKIRSLVNYCYDLRFQRPRLEQIKGRIMSICYKEKLKM 654
Query: 483 SSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIF 542
+ L + T DIR +N L L ++ Q V KD+ +D+ +++F
Sbjct: 655 PAAKLEGIIAATNNDIRQTINHLALLSAGDQLPESGQ--QQTVAAKDLKLGPWDVVRKVF 712
Query: 543 QKRKTKRLRNSVSSSSNVSNEFD-FLHSLISNRGDYDVIFDGIHENILQL---QYHDPVM 598
K++ ++ ++ D F H DY + + +N LQ+ + ++
Sbjct: 713 TADDHKQM--------SIYDKCDLFFH-------DYSMAPLFVQQNYLQVLPQGNRNEIL 757
Query: 599 LKTVKCLDCLGNSDLMHQYI 618
K D L DL+ + I
Sbjct: 758 AKVAATADALSLGDLVDKRI 777
>gi|408392832|gb|EKJ72146.1| hypothetical protein FPSE_07684 [Fusarium pseudograminearum CS3096]
Length = 1050
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 41/206 (19%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM--- 367
++ +++ GPPG+GKTT AH+AA GY V+E NASD RS +EN + DV+ S++
Sbjct: 513 ERAIIVSGPPGIGKTTAAHLAATLEGYDVLESNASDSRSKKLVENGVSDVMNNTSLLGYF 572
Query: 368 --------ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEK 419
A + L++DE+DG +G V + K
Sbjct: 573 AGDGKNVDATKKKIVLIMDEVDGMSAGDRGGVGALAKF---------------------- 610
Query: 420 ISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNES 479
CKK + P+I ICN+ P ++ A F +P+V +V SR+ IC+ E
Sbjct: 611 ------CKKTEI--PLILICNERKLPKMKPFDHAAFDIRFNRPTVDQVRSRIMTICHREG 662
Query: 480 MKTSSIALTTLAEYTECDIRSCLNTL 505
+K + L E + DIR +N +
Sbjct: 663 LKLPPTVVDALIEGSNKDIRQIINMI 688
>gi|84489226|ref|YP_447458.1| replication factor C large subunit [Methanosphaera stadtmanae DSM
3091]
gi|110287810|sp|Q2NH88.1|RFCL_METST RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|84372545|gb|ABC56815.1| RfcL [Methanosphaera stadtmanae DSM 3091]
Length = 534
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 120/252 (47%), Gaps = 42/252 (16%)
Query: 289 NSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDR 348
N+ +K + W K S G P QK LLL GPPG+GKTT+AH+ K +EVNASD R
Sbjct: 18 NAKAKAQIEVWANKW-SKGVP-QKPLLLMGPPGIGKTTIAHLVGKEYFSETIEVNASDKR 75
Query: 349 SSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTA 407
S I++ I + Q S+ S K L++DE+DG G D G + + + +
Sbjct: 76 SYDIIKSSIGEAAQTRSLF-HSGYKLLIMDEVDGISGRDDSGGARAVNETIKNSK----- 129
Query: 408 KENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRV 467
+P+I + ND Y+ L S++ + F + + +
Sbjct: 130 -------------------------QPIILMANDAYSKRLTSIKPKCQGIKFTKVHTNSI 164
Query: 468 VSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFL---DKKKEILNVMDIGSQV 524
++LK IC E ++ S AL TL++ + D+RS + +L+ + DKK + V
Sbjct: 165 NAQLKRICAREDIEYDSEALYTLSKESNGDLRSAITSLEAIVDNDKK-----ITKDSLSV 219
Query: 525 VGRKDMSRSAFD 536
+ +KD ++ FD
Sbjct: 220 IAKKDGEQNIFD 231
>gi|410049745|ref|XP_003952800.1| PREDICTED: LOW QUALITY PROTEIN: chromosome transmission fidelity
protein 18 homolog [Pan troglodytes]
Length = 719
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 93/179 (51%), Gaps = 28/179 (15%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LWVD++AP +TELLSD+ TNR +L WLK WD VFG + A + ++
Sbjct: 266 LWVDEFAPRYYTELLSDDFTNRCLLKWLKLWDLVVFGHQ--------RPARKPRPSVEPA 317
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
+ +++ K W S+ E G+ S P QKV LLC
Sbjct: 318 RVSKEATAPGK-----W------KSHEQVLEEMLEAGLDPSQR--------PRQKVALLC 358
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM-ADSRPKCL 375
GPPGLGKTTLAHV A+H GY VVE+NASDDRS +I QM SV+ AD P L
Sbjct: 359 GPPGLGKTTLAHVIARHAGYSVVEMNASDDRSPELFRTRIEAATQMESVLGADGNPPFL 417
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 79/178 (44%), Gaps = 18/178 (10%)
Query: 510 KKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLR-----------------N 552
+ ++ L+V ++ + VG KD R F +W+E+FQ + +R R +
Sbjct: 420 RAQQKLSVRNVQATRVGLKDQRRGLFXVWQEVFQLPRAQRRRVGQDPALPADTLLLGDGD 479
Query: 553 SVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSD 612
+ S +S + LH+ S G+++ + G+ +N L+L+ D + LD L D
Sbjct: 480 AGSLTSTSQRFYRVLHAAASA-GEHEKVVQGLFDNFLRLRLRDSSLGAVCVALDWLAFDD 538
Query: 613 LMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFK 670
L+ +Q L Y P L + H L + P + +P S Q + ++++ K
Sbjct: 539 LLAGAAHHSQSFQLLRYPPFLPVAFHVLFASSHTPRITFPSSQQETKQLIAREIEVEK 596
>gi|345564995|gb|EGX47951.1| hypothetical protein AOL_s00081g278 [Arthrobotrys oligospora ATCC
24927]
Length = 1029
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 41/205 (20%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM---- 367
+ +++ GPPG+GKTT AH+ AK GY V+E NASD RS ++ + V+ S+M
Sbjct: 481 RAVMIHGPPGVGKTTAAHLVAKLEGYDVLESNASDTRSKKLLDTSLKGVLDNRSLMGYFN 540
Query: 368 -------ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
A + L++DE+DG G +G V + +
Sbjct: 541 AGDKKVDAAKQKIVLIMDEVDGMSGGDRGGVGQMAAI----------------------- 577
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
C+K + PVICICND P ++ + F +P+ + + +R+ IC E +
Sbjct: 578 -----CRKTQI--PVICICNDRRLPKMKPFDHVTYDLQFRRPTATEIRTRMMTICYREGL 630
Query: 481 KTSSIALTTLAEYTECDIRSCLNTL 505
K S A+ +L E + DIR +N L
Sbjct: 631 KLSPQAIDSLTEGSHSDIRQIINML 655
>gi|389644148|ref|XP_003719706.1| chromosome transmission fidelity protein 18 [Magnaporthe oryzae
70-15]
gi|351639475|gb|EHA47339.1| chromosome transmission fidelity protein 18 [Magnaporthe oryzae
70-15]
gi|440472913|gb|ELQ41743.1| chromosome transmission fidelity protein 18 [Magnaporthe oryzae
Y34]
gi|440484454|gb|ELQ64521.1| chromosome transmission fidelity protein 18 [Magnaporthe oryzae
P131]
Length = 1028
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 119/241 (49%), Gaps = 28/241 (11%)
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA 368
P +K+L+L GPPGLGKTTLAHV AK GY V+E+NASDDRS + +I + +V
Sbjct: 304 PHRKILMLTGPPGLGKTTLAHVCAKQAGYEVLEINASDDRSRDVVRGRIRTSLGTENVKT 363
Query: 369 -------DSRPKCLV-----------IDEIDGALGDGKGAVEVILKMVSAERKSNTAKEN 410
D +P + G V+ ++ +V ++K++ + +
Sbjct: 364 VEQHKSVDGKPPKVARPVCVVVDEVDGVVSGSGGSGEGGFVKALIDLVMTDQKNSASGAS 423
Query: 411 VAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQ--IAKVHVFIQPSVSRVV 468
+ K +++K +RP+I ICND+Y +LR LRQ +A++ +P++ VV
Sbjct: 424 GSS-----KSNRRKKGDDFRQMRPLILICNDVYHVSLRPLRQSGLAEIVHVGKPTIEAVV 478
Query: 469 SRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKE--ILNVMDIGSQVVG 526
+RLK I + E + A L EY + S ++ + + E + VM +G V G
Sbjct: 479 TRLKSIFDKEGIPCEKDAARKLCEYA-WGMNSGIDARRGAESTVEGDLRGVMVVGEWVAG 537
Query: 527 R 527
R
Sbjct: 538 R 538
>gi|46105398|ref|XP_380503.1| hypothetical protein FG00327.1 [Gibberella zeae PH-1]
Length = 1049
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 41/206 (19%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM--- 367
++ +++ GPPG+GKTT AH+AA GY V+E NASD RS +EN + DV+ S++
Sbjct: 512 ERAIIVSGPPGIGKTTAAHLAATLEGYDVLESNASDSRSKKLVENGVSDVMNNTSLLGYF 571
Query: 368 --------ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEK 419
A + L++DE+DG +G V + K
Sbjct: 572 AGDGKNVDATKKKIVLIMDEVDGMSAGDRGGVGALAKF---------------------- 609
Query: 420 ISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNES 479
CKK + P+I ICN+ P ++ A F +P+V +V SR+ IC+ E
Sbjct: 610 ------CKKTEI--PLILICNERKLPKMKPFDHAAFDIRFNRPTVDQVRSRIMTICHREG 661
Query: 480 MKTSSIALTTLAEYTECDIRSCLNTL 505
+K + L E + DIR +N +
Sbjct: 662 LKLPPTVVDALIEGSNKDIRQIINMI 687
>gi|340960716|gb|EGS21897.1| putative chromosome transmission fidelity protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 1033
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 129/239 (53%), Gaps = 26/239 (10%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV---- 366
+K+L+L GPPGLGKTTLAHV A+ GY V+E+NASD+RS ++ +I + +V
Sbjct: 306 RKILMLHGPPGLGKTTLAHVCARQAGYEVLEINASDERSKDVVKGRIRTALGTETVKTVE 365
Query: 367 ---------MADSRPKCLVIDEIDGALGDGKGA-----VEVILKMVSAERKSNTAKENVA 412
+RP C+V+DE+DG +G G+ V+ ++ ++ ++K+++ +
Sbjct: 366 NRKAEPGKKQKIARPVCVVVDEVDGVVGGSGGSGEGGFVKALIDLILLDQKNSSGAGSTT 425
Query: 413 KEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQ--IAKVHVFIQPSVSRVVSR 470
K K ++ +RP+I ICND+Y P+LR LRQ +A++ +PSV VV+R
Sbjct: 426 SGQGKRKNKKADDFRQ---MRPLILICNDVYHPSLRPLRQSGLAEIIHVGKPSVEAVVNR 482
Query: 471 LKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKE--ILNVMDIGSQVVGR 527
LK I E ++ A L E T I + ++ + + E + VM +G V GR
Sbjct: 483 LKSIFEKEGIRCDKDAARKLCEAT-WGITNAIDAKRGSESNAEGDLRGVMVVGEWVAGR 540
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 9/106 (8%)
Query: 136 SSGVEERVKKLDVRAHSNSLTSEPIDVLLQKVEQE---AFNKALNSSSEGQSDRSLPE-- 190
S+ V R + + RAH S PI L+ +E A ++ ++S Q RS+ +
Sbjct: 165 SAMVAARSRHKEGRAH-KSYYGIPIHELIDNANKELARACKESTTATSCDQPVRSVEDGH 223
Query: 191 ---KPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVF 233
K LW +KY +F +L+ D+ TNR+VL WLK+WD VF
Sbjct: 224 TSLKKPKRAMLWTEKYRARTFMDLVGDDLTNRQVLRWLKRWDPIVF 269
>gi|303389467|ref|XP_003072966.1| DNA replication factor C subunit [Encephalitozoon intestinalis ATCC
50506]
gi|303302109|gb|ADM11606.1| DNA replication factor C subunit [Encephalitozoon intestinalis ATCC
50506]
Length = 566
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 142/318 (44%), Gaps = 56/318 (17%)
Query: 307 GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV 366
G + K LL G PG+GKTT+AH+ + G+ VVE NASD R+ S I +K+ S+
Sbjct: 140 GCTKYKAALLSGHPGIGKTTMAHIVCRSLGFDVVEFNASDIRNKSEISSKVRSFTNSQSI 199
Query: 367 MAD-SRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKG 425
+ S+ K L++DE+DG D G I ++VS +K+
Sbjct: 200 CSGTSKKKALIMDEVDGMSSDRGG----IPELVSVIKKTTI------------------- 236
Query: 426 CKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSI 485
P+ICICND +R+L F +P V+ R+KHI E +
Sbjct: 237 --------PIICICNDRNNLKIRTLSNHCLDLRFRKPDSRPVLLRIKHILEKEGKRIPDG 288
Query: 486 ALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKR 545
L+ + + DIR ++ +Q + ++ + + I + V +K + +S FD+ E+FQ++
Sbjct: 289 VLSEIIAKSNGDIRYAISMVQGISLRRTLNS--SISTNFV-KKSVMKSLFDVAGEVFQRK 345
Query: 546 KTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCL 605
+VS + D DY ++ + EN+L+ + L +C
Sbjct: 346 -------------SVSEKIDLYFE------DYSLVPLFVSENVLKTSFKSLGDLS--ECF 384
Query: 606 DCLGNSDLMHQYIMRTQQ 623
D + D++ + I Q
Sbjct: 385 DSISLGDVVERLIRGAGQ 402
>gi|195111811|ref|XP_002000470.1| GI10247 [Drosophila mojavensis]
gi|193917064|gb|EDW15931.1| GI10247 [Drosophila mojavensis]
Length = 1026
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 138/320 (43%), Gaps = 59/320 (18%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRS--------SSTIENKILDVVQM 363
K LL GPPG+GKTT A + K G+ VE NASD RS SS + NK L
Sbjct: 525 KAALLSGPPGIGKTTTATLVTKELGFDAVEFNASDTRSKRLLKEEVSSLLGNKSLAGYAN 584
Query: 364 NSVMADSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISK 422
A S+ L++DE+DG G + +G ++ ++ ++
Sbjct: 585 GKTQAVSKKHVLIMDEVDGMAGNEDRGGMQELIALI------------------------ 620
Query: 423 KKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKT 482
K +S+ P+IC+CND P +RSL F +P + ++ R+ IC E +K
Sbjct: 621 ----KDSSV--PIICMCNDRNHPKIRSLVNYCYDLRFQRPRIEQIKGRIMSICFKEKIKM 674
Query: 483 SSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIF 542
S L + T DIR +N + L +++ QV KD+ +++ +++F
Sbjct: 675 SPGKLEEIIGATNNDIRQTINHIALLSAGEQLPGNPSATPQVAA-KDLKLGPWEVVRKVF 733
Query: 543 QKRKTKRLRNSVSSSSNVSNEFD-FLHSLISNRGDYDVIFDGIHENILQLQ---YHDPVM 598
+ K + ++ ++ D F H DY + + +N LQ+ + ++
Sbjct: 734 AAEEHKHM--------SIFDKCDLFFH-------DYSMAPLFVQQNYLQVTPQGNRNEIL 778
Query: 599 LKTVKCLDCLGNSDLMHQYI 618
K D L D++ + I
Sbjct: 779 SKVAATADALSLGDMVDKRI 798
>gi|195343531|ref|XP_002038351.1| GM10782 [Drosophila sechellia]
gi|194133372|gb|EDW54888.1| GM10782 [Drosophila sechellia]
Length = 980
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 137/319 (42%), Gaps = 59/319 (18%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRS--------SSTIENKILDVVQM 363
K LL GPPG+GKTT A + K G+ VE NASD RS S+ + NK L
Sbjct: 475 KAALLSGPPGIGKTTTATLVVKELGFDAVEFNASDTRSKRLLKDEVSTLLSNKSLSGYFT 534
Query: 364 NSVMADSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISK 422
A SR L++DE+DG G + +G ++ ++ ++
Sbjct: 535 GQGQAVSRKHVLIMDEVDGMAGNEDRGGMQELIALI------------------------ 570
Query: 423 KKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKT 482
K +S+ P+IC+CND P +RSL F +P + ++ ++ IC E +K
Sbjct: 571 ----KDSSI--PIICMCNDRNHPKIRSLVNYCYDLRFQRPRLEQIKGKIMSICFKEKVKI 624
Query: 483 SSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIF 542
S + + T DIR +N + L K+ + Q + KD+ +++ +++F
Sbjct: 625 SPAKVEEIIAATNNDIRQSINHIALLSAKE---DASKKSGQQIATKDLKLGPWEVVRKVF 681
Query: 543 QKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQL---QYHDPVML 599
+ K + S + S++ F H DY + + +N LQ+ V+
Sbjct: 682 TADEHKHM--SFADKSDL-----FFH-------DYSLAPLFVQQNYLQVLPQGNKKDVLA 727
Query: 600 KTVKCLDCLGNSDLMHQYI 618
K D L DL+ + I
Sbjct: 728 KVAATADALSLGDLVEKRI 746
>gi|425765331|gb|EKV04031.1| DNA replication factor C subunit Rfc1, putative [Penicillium
digitatum Pd1]
gi|425766812|gb|EKV05409.1| DNA replication factor C subunit Rfc1, putative [Penicillium
digitatum PHI26]
Length = 1055
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 156/365 (42%), Gaps = 77/365 (21%)
Query: 299 WH-------KKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSS 351
WH KK G + +++ GPPG+GKTT AH+ AK G+ VVE NASD RS
Sbjct: 505 WHASAQADFKKGGKDGSGTYRAVIIHGPPGIGKTTAAHLVAKLEGFDVVETNASDTRSKK 564
Query: 352 TIENKILDVV-----------QMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSA 400
+E+ L V+ Q V ++ + L++DE+DG +G V + +V
Sbjct: 565 LVESSTLGVLDTTSLQGYFAGQGKQVESEKKKLVLIMDEVDGMSAGDRGGVGAVAAIV-- 622
Query: 401 ERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFI 460
KK + P+I ICN+ ++ I F
Sbjct: 623 --------------------------KKTKI--PIILICNERKLQKMKPFDFITYDVPFR 654
Query: 461 QPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDI 520
+P+ ++ +RL IC E +K L L E T DIR +N L ++ LN D
Sbjct: 655 RPTAEQIRARLSTICFREGLKIPPPVLDGLIEGTHADIRQVINMLSTARLDQKGLN-YDE 713
Query: 521 GSQVVG--RKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYD 578
G Q+ K++ +DI +I + S SS+S ++++ + + D++
Sbjct: 714 GKQMSKSWEKNIILKPWDIVGKILSAQMF-----SPSSTSTLNDKVELYFN------DHE 762
Query: 579 VIFDGIHENILQL------QYHDPVM-LKTVKCLD----CLGNSDLMHQYIMRTQQ---- 623
+ + EN L+ +YH LK+++ LD + + DL+ + I TQQ
Sbjct: 763 FSYLMLQENYLKTKPALAGKYHGQEQRLKSLELLDNAASSISDGDLVDRMIHGTQQQWSL 822
Query: 624 MPLYV 628
MP +
Sbjct: 823 MPTHA 827
>gi|340505325|gb|EGR31667.1| mitochondrial processing peptidase beta, putative [Ichthyophthirius
multifiliis]
Length = 778
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 116/265 (43%), Gaps = 50/265 (18%)
Query: 277 GNFRNSNNLEYENSN---------SKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTL 327
GNF+ +E N +KG +W + T + K L+ GPPG+GKT+
Sbjct: 110 GNFQQIKKIELWLQNWHSVVIKKETKGQSKNWKENTSA------KACLISGPPGIGKTST 163
Query: 328 AHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSR---PKCLVIDEIDGAL 384
+ AK Y ++E NASD RS + +E +++ + N V+ S +++DEIDG
Sbjct: 164 VRLLAKKYEYQIIEWNASDVRSKNQLE-QLVKPLSSNCVLGQSNRNNKAIILMDEIDGMS 222
Query: 385 GDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYA 444
G + +LK++ KE Q P+ C+CND Y
Sbjct: 223 SGDIGGSQQLLKII--------------KETQI----------------PIFCVCNDRYN 252
Query: 445 PALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNT 504
L+S+ F +P +V + L IC E +K ++ L LAE CDIR +N
Sbjct: 253 QKLKSIANYCYDIRFFKPQKQQVAALLSKICVQEKIKADNLGLELLAENANCDIRQAINY 312
Query: 505 LQFLDKKKEILNVMDIGSQVVGRKD 529
LQ + K N+ I S + KD
Sbjct: 313 LQMESQNKNN-NIFSIKSLKLASKD 336
>gi|324502655|gb|ADY41166.1| Replication factor C subunit 1 [Ascaris suum]
Length = 1002
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 176/446 (39%), Gaps = 96/446 (21%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV----- 366
K +LL GPPG+GKTT A +A K G VE+NASD R+ +E+K+ +++ + +
Sbjct: 492 KAILLSGPPGIGKTTCALMACKELGLQFVEMNASDARNKKFLESKVAELIGCHQIDEYFG 551
Query: 367 -------MADSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPE 418
AD L++DE+DG G + + + +++M+ R
Sbjct: 552 GKSRKVAKADELGHVLIMDEVDGMSGNEDRAGLSELIQMIRETRI--------------- 596
Query: 419 KISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNE 478
P+ICICND +P +RSL F +P V ++ SR++ I E
Sbjct: 597 ---------------PIICICNDRQSPKMRSLVNYCFDVRFQRPRVEQIRSRMQTIAFQE 641
Query: 479 SMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIW 538
+K S + + E + D+R + LQ L M S + +KD + + F+
Sbjct: 642 KLKLSKEQIDEVIEASNHDVRQTIYNLQLLS--------MGGKSGEIQQKDCAVNTFEAA 693
Query: 539 KEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHEN---ILQLQYHD 595
+ I S +S E F DY +I I EN I + +D
Sbjct: 694 RRIL----------SADTSMVEKQEMFFT--------DYTIIPLFIQENYPSIHSNKMND 735
Query: 596 PVMLKTV-KCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKS 654
L + K D + D++ + I T L Q L S I P++
Sbjct: 736 SQKLNALRKAADSISQGDIVERTIRTTGSWGLLNEQA--------LFSSIL-PSM----- 781
Query: 655 YQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDS---ISPLLHILSP---PTLRP 708
Y N +++ M F SW K R L + IS H L P LR
Sbjct: 782 ---YMNGYLKSMINFPSWLGKNSMTNKRQRLMRQLASHTHLKISADCHSLVTDYVPVLRD 838
Query: 709 VALHLLSAKEKNDLAQLVSAMVSYSL 734
L KE + ++++++ Y L
Sbjct: 839 RLCRPLVEKEGDGVSEVIATYNQYDL 864
>gi|145483437|ref|XP_001427741.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124394824|emb|CAK60343.1| unnamed protein product [Paramecium tetraurelia]
Length = 807
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 94/196 (47%), Gaps = 33/196 (16%)
Query: 315 LLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPK- 373
L+ GPPG+GKT++ + A+ G ++ NASD R+ ++ + + D++ + +M RP
Sbjct: 295 LISGPPGIGKTSMVRLVAEALGLKLIVNNASDKRNKGSLRSVLNDLIDNSVLMNLFRPNK 354
Query: 374 --CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASL 431
+V+DE+DG G +G + +++ + + R
Sbjct: 355 DFLIVMDEVDGMTGSDRGGISALIECIKSTR----------------------------- 385
Query: 432 LRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLA 491
P++CICND+ P L+SL F +P V RLK+IC E++ S L LA
Sbjct: 386 -VPIVCICNDIDNPKLKSLLSHCYSIKFQKPEAKSVAKRLKYICEQENINMSFEDLEKLA 444
Query: 492 EYTECDIRSCLNTLQF 507
+CDIR +N L+
Sbjct: 445 ICFDCDIRQSINMLEL 460
>gi|452208866|ref|YP_007488980.1| Replication factor C large subunit [Methanosarcina mazei Tuc01]
gi|452098768|gb|AGF95708.1| Replication factor C large subunit [Methanosarcina mazei Tuc01]
Length = 605
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 119/267 (44%), Gaps = 38/267 (14%)
Query: 290 SNSKGIQD--SWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDD 347
N K +QD W ++ +S G PE++ ++L GP G+GKT+ AH A + V+E+NASD
Sbjct: 21 GNRKAVQDLRKWAEEWQS-GIPEKRAVILYGPAGIGKTSSAHALAGDMEWEVIELNASDQ 79
Query: 348 RSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTA 407
R++ IE MN+ R +++DE D G +A+R A
Sbjct: 80 RTAGVIEKIAGSAASMNTFFGGKR--LIILDEADNLHG-------------TADRGGMRA 124
Query: 408 KENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRV 467
+ K S L+P+I I ND+Y ++R I F +
Sbjct: 125 ISGIIK----------------STLQPIILIANDIYG-LTPTVRNICLEIKFGSVQSRSM 167
Query: 468 VSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGR 527
V LK +C +E + S A+ +AE D RS +N LQ K+ L DI + GR
Sbjct: 168 VPALKKVCESEGVSCSQEAVLQIAENAGGDFRSAINDLQAAANGKKALEAEDIST--AGR 225
Query: 528 KDMSRSAFDIWKEIFQKRKTKRLRNSV 554
D+ + F ++IF+ KR S
Sbjct: 226 -DVKENIFKAMQKIFKSTDCKRALESA 251
>gi|21226355|ref|NP_632277.1| replication factor C large subunit [Methanosarcina mazei Go1]
gi|42559489|sp|Q8Q084.1|RFCL_METMA RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|20904606|gb|AAM29949.1| replication factor C subunit [Methanosarcina mazei Go1]
Length = 610
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 119/267 (44%), Gaps = 38/267 (14%)
Query: 290 SNSKGIQD--SWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDD 347
N K +QD W ++ +S G PE++ ++L GP G+GKT+ AH A + V+E+NASD
Sbjct: 26 GNRKAVQDLRKWAEEWQS-GIPEKRAVILYGPAGIGKTSSAHALAGDMEWEVIELNASDQ 84
Query: 348 RSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTA 407
R++ IE MN+ R +++DE D G +A+R A
Sbjct: 85 RTAGVIEKIAGSAASMNTFFGGKR--LIILDEADNLHG-------------TADRGGMRA 129
Query: 408 KENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRV 467
+ K S L+P+I I ND+Y ++R I F +
Sbjct: 130 ISGIIK----------------STLQPIILIANDIYG-LTPTVRNICLEIKFGSVQSRSM 172
Query: 468 VSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGR 527
V LK +C +E + S A+ +AE D RS +N LQ K+ L DI + GR
Sbjct: 173 VPALKKVCESEGVSCSQEAVLQIAENAGGDFRSAINDLQAAANGKKALEAEDIST--AGR 230
Query: 528 KDMSRSAFDIWKEIFQKRKTKRLRNSV 554
D+ + F ++IF+ KR S
Sbjct: 231 -DVKENIFKAMQKIFKSTDCKRALESA 256
>gi|146322944|ref|XP_755554.2| DNA replication factor C subunit Rfc1 [Aspergillus fumigatus Af293]
gi|129558538|gb|EAL93516.2| DNA replication factor C subunit Rfc1, putative [Aspergillus
fumigatus Af293]
gi|159129617|gb|EDP54731.1| DNA replication factor C subunit Rfc1, putative [Aspergillus
fumigatus A1163]
Length = 1085
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 110/245 (44%), Gaps = 49/245 (20%)
Query: 298 SWHKKTR-------STGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSS 350
+WHK + G + +++ GPPG+GKTT AH+ AK GY VVE NASD RS
Sbjct: 508 NWHKNAKFNFSRPGKDGSGVYRAVMIHGPPGIGKTTAAHLVAKLEGYDVVETNASDTRSK 567
Query: 351 STIENKILDVVQMNSVMA---------DSRPK--CLVIDEIDGALGDGKGAVEVILKMVS 399
+E+ +LD++ S+ +S K L++DE+DG +G V ++ +
Sbjct: 568 KLVESNLLDILDTTSLQGYFSGEGKKIESTKKNLVLIMDEVDGMSAGDRGGVGALVSL-- 625
Query: 400 AERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVF 459
KK + P+I ICN+ P ++ + F
Sbjct: 626 --------------------------AKKTHI--PLILICNERRLPKMKPFDHVTYELPF 657
Query: 460 IQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMD 519
+P+ ++ +RL IC E +K L +L E T DIR +N L + ++ L+ D
Sbjct: 658 RRPTAEQIRARLSTICFREGLKIPPPVLDSLIEGTNADIRQVINMLSTVKLDQQQLD-FD 716
Query: 520 IGSQV 524
G ++
Sbjct: 717 TGKEM 721
>gi|171683465|ref|XP_001906675.1| hypothetical protein [Podospora anserina S mat+]
gi|170941692|emb|CAP67346.1| unnamed protein product [Podospora anserina S mat+]
Length = 984
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 147/629 (23%), Positives = 243/629 (38%), Gaps = 141/629 (22%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-- 368
+K+L+L GPPGLGKTTLAHV A+ GY V+E+NASDDRS ++ +I + +V
Sbjct: 294 RKILVLHGPPGLGKTTLAHVCARQAGYDVLEINASDDRSKDVVKGRIRTTLGTETVRTLE 353
Query: 369 ------------DSRPKCLVIDEIDGALGDGKGA-----VEVILKMVSAERKSNTAKENV 411
+RP C+V+DE+DG + V ++ +V+ ++K+++ +
Sbjct: 354 NKKAGETGKGDKIARPICVVVDEVDGVVSGSGAGGEGGFVRALIDLVTTDQKNSSGQGGG 413
Query: 412 AKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQ--IAKVHVFIQPSVSRVVS 469
K+ + +RP+I ICND+Y P+LR LRQ +A+V +P+V VV+
Sbjct: 414 KKKGDDFR-----------QMRPLILICNDVYHPSLRPLRQSGVAEVIHVGKPTVEAVVT 462
Query: 470 RLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKE------ILNVMDIGSQ 523
RLK + E + A L C+ + + Q + K E + VM +G
Sbjct: 463 RLKAVFEKEGIPCDRDAARKL-----CEAAWGMTSGQDVRKGAESTAEGDLRGVMVVGEW 517
Query: 524 VVGR-KDMSRSA--------------------------------FDIWKEIFQK------ 544
V GR K S+ A +I IFQ+
Sbjct: 518 VAGRLKATSKQATPSLTRQWIDQNVIQDLAHGGGGARGIGRGGVREIVNRIFQEGAGFPK 577
Query: 545 ------RKTKRLRNSVSSSSNVSNE-----FDFLHSLISNRGDYDVIFDGIHENILQLQY 593
K L + +S + L +I G+ D I I +
Sbjct: 578 QSLPAAAKKNALHEQPQAQLGISEQTKKYAMSRLREMIDTSGEVDRIMTEIFLEYPNRDF 637
Query: 594 HDPVML-KTVKCLDCLGNSDLMHQYIMRTQQMPL--YVYQPPLAITVHRLVSQIQK---- 646
+D L K + + D I Q+ L Y+ QP LA H L + ++
Sbjct: 638 NDDSFLTKPDIAYEWMHFHDTCSSRIFSAQEWELAQYISQPVLA--CHHLFASARRHQPA 695
Query: 647 ----------PNLEWPKSYQRYRNAF----MEKMD--IFKSWHSKIPPYISRHLSTESLV 690
PN P + R + EK++ I + +PP +SR + +
Sbjct: 696 AHERKWGEDDPNEAPPLPFSGPRADYEAREAEKLNRAILQGIQDSLPPSLSRSFRSPEDI 755
Query: 691 EDSISPLLHILSPPTLRPVAL-------HLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDP 743
P L L P ++PV + + S + + + A + A +
Sbjct: 756 ATDFLPYLVRLVSPDVKPVVIGGSDKTGSIASVRREGEKAMVRRAANVLAEVGIQLHKGK 815
Query: 744 LLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLA------LAVKQVLVHEVEK-- 795
+ ++ G V +P ++ TF+ ++ ++ + AV+QVL E+ K
Sbjct: 816 IEDSSGGLVGRTTWVYRMEPDLDTLATFETASASQFLFSQAPPTRYAVRQVLDQELAKTI 875
Query: 796 --------QRIMQVTIGKSEHLADGYKEN 816
Q ++ G H D KEN
Sbjct: 876 AAKETASRQARLRAGGGIIPHFDDNNKEN 904
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 26/36 (72%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVF 233
LW +KY +F +L+ D+ TNR+VL WLK+WD VF
Sbjct: 232 LWTEKYRARNFMDLVGDDLTNRQVLRWLKKWDPIVF 267
>gi|195568307|ref|XP_002102159.1| GD19753 [Drosophila simulans]
gi|194198086|gb|EDX11662.1| GD19753 [Drosophila simulans]
Length = 980
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 137/319 (42%), Gaps = 59/319 (18%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRS--------SSTIENKILDVVQM 363
K LL GPPG+GKTT A + K G+ VE NASD RS S+ + NK L
Sbjct: 475 KAALLSGPPGIGKTTTATLVVKELGFDAVEFNASDTRSKRLLKDEVSTLLSNKSLSGYFT 534
Query: 364 NSVMADSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISK 422
A SR L++DE+DG G + +G ++ ++ ++
Sbjct: 535 GQGQAVSRKHVLIMDEVDGMAGNEDRGGMQELIALI------------------------ 570
Query: 423 KKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKT 482
K +S+ P+IC+CND P +RSL F +P + ++ + IC E +K
Sbjct: 571 ----KDSSI--PIICMCNDRNHPKIRSLVNYCYDLRFQRPRLEQIKGKGMSICFKEKVKI 624
Query: 483 SSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIF 542
S+ + + T DIR +N + L K+ + Q + KD+ +++ +++F
Sbjct: 625 STAKVEEIIAATNNDIRQSINHIALLSAKE---DASQKSGQQIATKDLKLGPWEVVRKVF 681
Query: 543 QKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQL---QYHDPVML 599
+ K + S + S++ F H DY + + +N LQ+ V+
Sbjct: 682 TADEHKHM--SFADKSDL-----FFH-------DYSLAPLFVQQNYLQVLPQGNKKDVLA 727
Query: 600 KTVKCLDCLGNSDLMHQYI 618
K D L DL+ + I
Sbjct: 728 KVAATADALSLGDLVEKRI 746
>gi|350402706|ref|XP_003486574.1| PREDICTED: replication factor C subunit 1-like [Bombus impatiens]
Length = 987
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 181/424 (42%), Gaps = 89/424 (20%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM---- 367
K LL GPPG+GKTT V G+ ++E NASD RS ++ ++ +++ ++
Sbjct: 481 KAALLSGPPGIGKTTTVQVVCNELGFDLIEFNASDTRSKKLLQEEVSELLSNTTIKNYFK 540
Query: 368 -ADSRPK---CLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISK 422
S+P L++DE+DG G + +G ++ ++ ++
Sbjct: 541 DVKSKPSSKHVLLMDEVDGMAGNEDRGGLQELITLIK----------------------- 577
Query: 423 KKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKT 482
S P++CICND P +R+L F +P + ++ +K +C E+++
Sbjct: 578 -------STDIPIVCICNDRNNPKMRTLSNYTFDLRFPKPRLEQIRGAMKSMCFKENIQI 630
Query: 483 SSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGR-----KDMSRSAFDI 537
S+ L L E T DIR +N L V GSQ KD+ +D+
Sbjct: 631 SNEDLDRLIESTNQDIRQVINHLALF--------VGQTGSQEKNEKKHINKDLRLGPWDV 682
Query: 538 WKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDP- 596
K++F + K + S+S SN+ F H DY++ + EN L + P
Sbjct: 683 VKKVFSVEEHKHM--SISDKSNL-----FFH-------DYNIAPLFVQENYLMVIPQVPK 728
Query: 597 --VMLKTVKCLDCLGNSDLMHQYIMRTQQ---MPLYVYQ----PPLAITVHRLVSQIQKP 647
++ + + + + D++ + I +P+ Y P A++ H + QI P
Sbjct: 729 NELLGRVAESAESIALGDVVEKSIRSNNAWSLLPIQAYYSSVIPGTAMSGH-IGGQINFP 787
Query: 648 NLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLR 707
S N M+++ + H+++ S+ E++ D I PL + + LR
Sbjct: 788 AWLGRNSKTGKLNRLMQEI----TLHARLATGASK----EAINLDYIRPLRNTI----LR 835
Query: 708 PVAL 711
P+A+
Sbjct: 836 PLAV 839
>gi|448509517|ref|XP_003866155.1| Ctf18 protein [Candida orthopsilosis Co 90-125]
gi|380350493|emb|CCG20715.1| Ctf18 protein [Candida orthopsilosis Co 90-125]
Length = 791
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 108/493 (21%), Positives = 216/493 (43%), Gaps = 70/493 (14%)
Query: 303 TRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASD---------------- 346
T S G P +K+LL+ GPPG+GKT H+ + GY++ E+NA +
Sbjct: 181 TDSLGRPNRKILLIHGPPGVGKTVATHILVRQMGYNIQELNAMNSMDTLPQGSFNNSAGS 240
Query: 347 ---DRSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERK 403
+S+ ++ KI + + N+V + +P CL+IDE+D +L + V+++ +V+A+++
Sbjct: 241 NAYSNASNALKLKIQNTLTSNAVSKNGKPFCLLIDELD-SLANTNDVVKILQDVVNADQR 299
Query: 404 SNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPA--------LRSLRQIAK 455
+ + + + + +K + L RP+ICI ND+Y+ L +R I+
Sbjct: 300 AYAKQRYLNGNNDNNQKRPRKADR--ILNRPIICIANDIYSRQQGKFGPNPLEKMRSISD 357
Query: 456 VHVFIQPSVSR--------------VVSRLKHICNNESMKTSSIALTTLAEYTECDIRSC 501
V F +P++++ V L + E M ++ + E + D+R+C
Sbjct: 358 VVTFRKPAIAQRATGARVSGSAMKSVKDFLMSVSERERMGLDYKDISEICEVCDGDLRAC 417
Query: 502 LNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVS 561
LN +QF ++ ++ + + KD S F + +++F ++ +L+ + + +
Sbjct: 418 LNQMQFSGRRSS----SNMNIKKMSTKDKHVSWFTMVEDVF--KRDPQLKKEENFNLLLQ 471
Query: 562 NEFDFLHSLISNRGD-YDVIFDGIHENILQLQY-HDPVMLKTVKCLDCLGNSDLMHQYIM 619
D I+ D +D +G+ L + + D +L+ + D D +
Sbjct: 472 KYMDGNGKSITGSIDSFDKFINGVFNKYLDIVHLQDDTLLRPSELSDWFHYQDCFNNSFN 531
Query: 620 RTQQMPLYVYQPPLAITVHRLVSQIQK--------PNLEWPKSYQRYRNAFMEKMDIFKS 671
Q Y + + L+S ++ PN + S++ + E I K+
Sbjct: 532 DANQ-----YSSLITLKSWTLLSDLKNYGEIKSLIPNAK-NLSFETFE-KLKENRHIVKT 584
Query: 672 WHSKIPPYISRHLST--ESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAM 729
S IP + + + + V + P L + P+L + LS+ E L ++VS +
Sbjct: 585 LTSNIPAAMRSAIGSMNDENVANYFLPCLTKILTPSLSSKSKGNLSSAEVEKLQKIVSLI 644
Query: 730 VSYSLTYKNTKSD 742
++ T + TK D
Sbjct: 645 ETFKFTLE-TKRD 656
>gi|168050549|ref|XP_001777721.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670941|gb|EDQ57501.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 850
Score = 101 bits (251), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 120/268 (44%), Gaps = 56/268 (20%)
Query: 283 NNLEYENSNSKGIQD---SWHK--------KTRSTGPPEQKVLLLCGPPGLGKTTLAHVA 331
N++ S K +QD W K K S+ ++K +LL GPPG+GKTT A +
Sbjct: 299 NDIIGNQSIVKQVQDWLVQWEKHHGNAVKGKKGSSSTSQKKAVLLSGPPGIGKTTTARLV 358
Query: 332 AKHCGYHVVEVNASDDRSSS----------TIENKILDVVQMNSVMADS---RPKCLVID 378
GY +EVNASD R S N I +++ S+ S R L++D
Sbjct: 359 CDLLGYEALEVNASDTRGKSDSNVKNGIGGKTSNTIKEMISNRSLGFGSKSERKAVLIMD 418
Query: 379 EIDGALGDGKGAV-EVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVIC 437
E+DG G +G V ++IL + S+ P+IC
Sbjct: 419 EVDGMSGGDRGGVADLILSIKSSH-------------------------------IPIIC 447
Query: 438 ICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECD 497
ICND Y+ L+SL F +P+ ++ RL+ I +E ++ +AL L+E D
Sbjct: 448 ICNDKYSQKLKSLINYCLPLPFRKPTKQQMAKRLQQIAKSEGLEVDDLALEELSERVNGD 507
Query: 498 IRSCLNTLQFLDKKKEILNVMDIGSQVV 525
+R LN LQ++ + L D+ ++++
Sbjct: 508 MRMALNQLQYMSLRSRSLKYSDVRTRLM 535
>gi|20090661|ref|NP_616736.1| replication factor C large subunit [Methanosarcina acetivorans C2A]
gi|42559496|sp|Q8TPU4.1|RFCL_METAC RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|19915708|gb|AAM05216.1| replication factor C, large subunit [Methanosarcina acetivorans
C2A]
Length = 607
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 121/264 (45%), Gaps = 42/264 (15%)
Query: 290 SNSKGIQD--SWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDD 347
N K ++D +W ++ +S PE + ++L GP G+GKT+ AH A+ + V+E+NASD
Sbjct: 26 GNKKAVRDFRAWAEEWQSR-IPETRAVILYGPAGIGKTSSAHALARDMDWDVIELNASDQ 84
Query: 348 RSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTA 407
R++ IE MN++ R +++DE D G +A+R A
Sbjct: 85 RTAGVIEKIAGSAASMNTLFGSKR--LIILDEADNIHG-------------TADRGGMRA 129
Query: 408 KENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYA--PALRSLRQIAKVHVFIQPSVS 465
+ K L+P++ I ND+Y P +R+L K F
Sbjct: 130 ISGIIK----------------GTLQPIVLIANDIYGLTPTIRNLCLEIK---FGSVQSR 170
Query: 466 RVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVV 525
+V LK +C E + S AL +AE D RS +N LQ KE L V DIG+
Sbjct: 171 SMVPALKKVCGAEGVYCSQEALLQIAENAGGDFRSAINDLQAAASGKEKLEVEDIGT--A 228
Query: 526 GRKDMSRSAFDIWKEIFQKRKTKR 549
GR D+ + F ++IF+ K+
Sbjct: 229 GR-DVKENIFKAMQKIFKSTDCKK 251
>gi|302923420|ref|XP_003053672.1| hypothetical protein NECHADRAFT_30719 [Nectria haematococca mpVI
77-13-4]
gi|256734613|gb|EEU47959.1| hypothetical protein NECHADRAFT_30719 [Nectria haematococca mpVI
77-13-4]
Length = 1042
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 99/206 (48%), Gaps = 41/206 (19%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-- 368
++ +++ GPPG+GKTT AH+AAK GY V+E NASD RS +E+ + DV+ S++
Sbjct: 508 ERAIIISGPPGIGKTTAAHLAAKLEGYDVLESNASDTRSKKLVESGVSDVMNNTSLLGYF 567
Query: 369 -------DSRPK--CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEK 419
D+ K L++DE+DG +G V + K
Sbjct: 568 AGDGKDVDTTKKKIVLIMDEVDGMSAGDRGGVGALAKY---------------------- 605
Query: 420 ISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNES 479
C+K + P+I ICN+ P ++ +A F +P+V +V SR+ IC+ E
Sbjct: 606 ------CRKTEI--PLILICNERKLPKMKPFDHVAFDIRFNRPTVDQVRSRIMTICHREG 657
Query: 480 MKTSSIALTTLAEYTECDIRSCLNTL 505
+K + L E + DIR +N +
Sbjct: 658 LKLPPAVVDALIEGSNKDIRQIINMI 683
>gi|194898632|ref|XP_001978873.1| GG12593 [Drosophila erecta]
gi|190650576|gb|EDV47831.1| GG12593 [Drosophila erecta]
Length = 981
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 140/323 (43%), Gaps = 67/323 (20%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRS--------SSTIENKILDVVQM 363
K LL GPPG+GKTT A + K G+ VE NASD RS S+ + NK L
Sbjct: 480 KAALLSGPPGIGKTTTATLVVKELGFDAVEFNASDTRSKRLLKDEVSTLLSNKSLSGYFT 539
Query: 364 NSVMADSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISK 422
A SR L++DE+DG G + +G ++ ++ ++
Sbjct: 540 GQGQAVSRKHVLIMDEVDGMAGNEDRGGMQELIALI------------------------ 575
Query: 423 KKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKT 482
K +S+ P+IC+CND P +RSL F +P + ++ ++ IC E +K
Sbjct: 576 ----KDSSI--PIICMCNDRNHPKIRSLVNYCYDLRFQRPRLEQIKGKIMSICFKEKVKI 629
Query: 483 SSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGR----KDMSRSAFDIW 538
S + + T DIR +N + L K++ GSQ G+ KD+ +++
Sbjct: 630 SPAKVEEIIAATNNDIRQSINHIALLSAKED-------GSQKSGQQVATKDLKLGPWEVV 682
Query: 539 KEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQL---QYHD 595
+++F + K + ++ S++ F H DY + + +N LQ+
Sbjct: 683 RKVFTADEHKHM--TLGDKSDL-----FFH-------DYSLAPLFVQQNYLQVLPQGNKS 728
Query: 596 PVMLKTVKCLDCLGNSDLMHQYI 618
V+ K D L DL+ + I
Sbjct: 729 DVLAKVAATADALSLGDLVDKRI 751
>gi|254566547|ref|XP_002490384.1| Replication factor C subunit [Komagataella pastoris GS115]
gi|238030180|emb|CAY68103.1| Replication factor C subunit [Komagataella pastoris GS115]
gi|328350779|emb|CCA37179.1| Replication factor C subunit 1 [Komagataella pastoris CBS 7435]
Length = 908
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 115/263 (43%), Gaps = 48/263 (18%)
Query: 298 SWHKKTRST----GPPEQKVLLLC---GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSS 350
+W + RS GP V C GPPG+GKTT AH+ AK G+ ++E NASD RS
Sbjct: 376 NWFENKRSGFKHPGPDGTGVFRACLISGPPGIGKTTAAHLVAKSLGFDIIEKNASDVRSK 435
Query: 351 STIENKILDVVQMNSVMA----------DSRPKCLVIDEIDGALGDGKGAVEVILKMVSA 400
S + + + V+ S++ + R CL++DE+DG G V + +
Sbjct: 436 SLLMSDVKTVLDNTSLVGFFHSQDNAESNQRKFCLIMDEVDGMSSGDHGGVGALAQF--- 492
Query: 401 ERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFI 460
C+ S P+I ICND P +R ++ F
Sbjct: 493 -------------------------CRITS--TPIILICNDKSLPKMRPFDRVTLDLPFR 525
Query: 461 QPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDI 520
+PS S + SR+ I + E ++ + L E T+ DIR +N L + K ++I+ +
Sbjct: 526 RPSASELKSRIMTIAHREKLQLDPNVIDQLVEATKNDIRQIINLLSTVSKTQKIIGFENA 585
Query: 521 GS-QVVGRKDMSRSAFDIWKEIF 542
+ +K+++ FDI I
Sbjct: 586 AEIKQAWKKEVALKPFDITSRIL 608
>gi|346972444|gb|EGY15896.1| replication factor C subunit 1 [Verticillium dahliae VdLs.17]
Length = 1040
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 41/216 (18%)
Query: 301 KKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDV 360
+K + G ++ +++ GPPG+GKTT AH+AAK G+ V+E NASD RS +E + +V
Sbjct: 495 QKRGADGMGAERAIIISGPPGIGKTTAAHLAAKLEGFDVIESNASDTRSKRLVEEGVSEV 554
Query: 361 VQMNSVM-----------ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKE 409
+ S++ A + L++DE+DG +G V + K
Sbjct: 555 MNNTSLLGFFSGDGKKLDAGKKNIVLIMDEVDGMSAGDRGGVGALAKY------------ 602
Query: 410 NVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVS 469
CKK + P+I ICN+ P ++ +A F +P+V +V S
Sbjct: 603 ----------------CKKTEV--PLILICNERRLPKMKPFDHVAMDIQFRRPTVDQVRS 644
Query: 470 RLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
R+ IC+ E +K + L E + DIR +N +
Sbjct: 645 RIMTICHREGLKLPPPVVDALIEGSNKDIRQIINMI 680
>gi|115383954|ref|XP_001208524.1| hypothetical protein ATEG_01159 [Aspergillus terreus NIH2624]
gi|114196216|gb|EAU37916.1| hypothetical protein ATEG_01159 [Aspergillus terreus NIH2624]
Length = 1053
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 97/225 (43%), Gaps = 48/225 (21%)
Query: 299 WHKKT----RSTGPPEQKV---LLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSS 351
WHK + GP + ++L GPPG+GKTT AH+ A GY VVE NASD RS
Sbjct: 502 WHKSAHWNFKKAGPDGMGLYRSVMLHGPPGIGKTTAAHLVANLEGYDVVETNASDTRSKK 561
Query: 352 TIENKILDVVQMNS-----------VMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSA 400
+E +L V+ S V + L++DE+DG +G V M +
Sbjct: 562 LVETGLLGVLDTTSLQGYFSGEGKKVQGTKKNLVLIMDEVDGMSAGDRGGVGA---MAAV 618
Query: 401 ERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFI 460
+K++ P+I ICN+ P ++ + F
Sbjct: 619 AKKTHI---------------------------PLIMICNERKLPKMKPFDGVVYDLPFR 651
Query: 461 QPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
+P+V ++ +RL IC E MK L +L E T DIR +N L
Sbjct: 652 RPTVEQIRARLSTICFREGMKIPPPVLDSLIEGTHADIRQVINML 696
>gi|361124088|gb|EHK96209.1| putative Replication factor C subunit 1 [Glarea lozoyensis 74030]
Length = 1061
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 41/205 (20%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV----M 367
+ +++ GPPG+GKTT AH+AAK GY V+E NASD RS +E + +V+ NS+
Sbjct: 519 RAIMIHGPPGIGKTTAAHLAAKLAGYDVLENNASDTRSKKMVETGLNEVLSNNSLRGYYA 578
Query: 368 ADSRPK-------CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
D +P L++DE+DG +G V + K+
Sbjct: 579 GDGKPVDATKKNIVLIMDEVDGMSAGDRGGVGAMAKI----------------------- 615
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
CKK + P+I ICN+ ++ + F +P+V V SR+ IC+ E M
Sbjct: 616 -----CKKTDI--PMILICNEFNQQKMKPFEHVTFPIPFKRPTVDMVRSRIATICHREGM 668
Query: 481 KTSSIALTTLAEYTECDIRSCLNTL 505
K + L E + DIR +N +
Sbjct: 669 KLPMNVIDALIEGSNKDIRQIINMI 693
>gi|389638292|ref|XP_003716779.1| replication factor C subunit 1 [Magnaporthe oryzae 70-15]
gi|351642598|gb|EHA50460.1| replication factor C subunit 1 [Magnaporthe oryzae 70-15]
gi|440465129|gb|ELQ34469.1| replication factor C subunit 1 [Magnaporthe oryzae Y34]
gi|440488577|gb|ELQ68294.1| replication factor C subunit 1 [Magnaporthe oryzae P131]
Length = 1084
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 101/218 (46%), Gaps = 42/218 (19%)
Query: 301 KKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDV 360
KK + G ++ +++ GPPG+GKTT AH+AAK GY V+E NASD RS +EN + DV
Sbjct: 525 KKRGADGLGGERAIIISGPPGIGKTTAAHMAAKLAGYDVLESNASDTRSKKLVENGVSDV 584
Query: 361 VQMNSVMA---------DSRPK--CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKE 409
+ S++ D K L++DE+DG +G V + K
Sbjct: 585 INNTSLLGYFSGDGKKVDQARKNIVLIMDEVDGMSAGDRGGVGALAKF------------ 632
Query: 410 NVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVS 469
CKK + P+I ICN+ P ++ +A F +P+V ++ S
Sbjct: 633 ----------------CKKTEV--PLILICNERRLPKMKPFDHVAFDIRFNRPTVDQIRS 674
Query: 470 RLKHICNNESM-KTSSIALTTLAEYTECDIRSCLNTLQ 506
R+ IC+ E + K + L E DIR +N +
Sbjct: 675 RIMTICHREGLGKMPPQVIDALIEGCNKDIRQIINMVH 712
>gi|218185964|gb|EEC68391.1| hypothetical protein OsI_36544 [Oryza sativa Indica Group]
Length = 1014
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 51/242 (21%)
Query: 296 QDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDR--SSSTI 353
Q KK +G +K +LL GPPG+GKTT A V ++ G +EVNASD R + S I
Sbjct: 439 QKGKGKKQADSGA--KKAVLLSGPPGIGKTTTAKVVSQMLGLQAIEVNASDSRGKADSKI 496
Query: 354 E--------NKILDVVQMNSVMADS-----RPKC-LVIDEIDG-ALGDGKGAVEVILKMV 398
E N I +++ N+ + S RPK LV+DE+DG + GD G ++I +
Sbjct: 497 EKGVGGSTSNSIKELIS-NATLNYSNNRLKRPKAVLVMDEVDGMSAGDRGGVADLIASI- 554
Query: 399 SAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHV 458
K+SK P+ICICND Y+ L+SL +
Sbjct: 555 --------------------KMSK----------IPIICICNDRYSQKLKSLVNYCLLLN 584
Query: 459 FIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVM 518
F +P+ ++ RL I E ++ A+ LAE DIR LN LQ++ + ++
Sbjct: 585 FRKPTKQQMGKRLMEIAKKEGLQAQENAMEELAERVHGDIRMALNHLQYMSLSQSVVKYD 644
Query: 519 DI 520
DI
Sbjct: 645 DI 646
>gi|328722322|ref|XP_001945573.2| PREDICTED: replication factor C subunit 1-like [Acyrthosiphon
pisum]
Length = 745
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 168/412 (40%), Gaps = 118/412 (28%)
Query: 194 VHEQLWVDKYAPNSFTELL--SDEQTNREVLL-WLKQWDSCVFGSEIRSTSEEVLSALRR 250
+ +LWV+KY P + +++ + E++N L WLK W S
Sbjct: 192 IESKLWVEKYKPLTLKQIIGQTGEKSNVNKLANWLKSWYS-------------------- 231
Query: 251 HSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPE 310
+ + NKK TR + + NG F
Sbjct: 232 NHGVGVNKK-----LTRPSPWAKDDNGAFF------------------------------ 256
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM--- 367
K LL G PG+GKTT AH+ K G+ +VE NASD RS ++N + +++ S+
Sbjct: 257 -KAALLSGSPGVGKTTTAHLVCKELGFDIVEFNASDTRSKKQLQNNVSELLSSTSLSPFL 315
Query: 368 ---ADSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKK 423
+ ++ L++DE+DG G + +G V+ ++ ++ K
Sbjct: 316 GGKSVTKKHALLMDEVDGMAGNEDRGGVQELIILI-----------------------KN 352
Query: 424 KGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTS 483
C PVIC+CND P +R+L F +P + ++ + + IC E +K S
Sbjct: 353 AKC-------PVICMCNDRNHPKIRTLSNYCFDLRFHKPKLEQIKAAMMSICYKEKLKIS 405
Query: 484 SIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQ 543
L+++ T+ DIR LN L + K+ LN + +K + +D+ +++F
Sbjct: 406 PETLSSIIASTDNDIRLTLNHLSVVAAGKDNLN--------INKKYIKMGPWDVVRKVFS 457
Query: 544 KRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHD 595
+ K S N++++ D DY++ + EN L HD
Sbjct: 458 AEEHK--------SMNITDKCDLFFY------DYNISPLFVQENYLAAVPHD 495
>gi|30314655|dbj|BAC76085.1| replication factor C 110 kDa subunit [Oryza sativa Japonica Group]
Length = 1021
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 51/242 (21%)
Query: 296 QDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDR--SSSTI 353
Q KK +G +K +LL GPPG+GKTT A V ++ G +EVNASD R + S I
Sbjct: 446 QKGKGKKQADSGA--KKAVLLSGPPGIGKTTTAKVVSQMLGLQAIEVNASDSRGKADSKI 503
Query: 354 E--------NKILDVVQMNSVMADS-----RPKC-LVIDEIDG-ALGDGKGAVEVILKMV 398
E N I +++ N+ + S RPK LV+DE+DG + GD G ++I +
Sbjct: 504 EKGVGGSTSNSIKELIS-NATLNYSNNRLKRPKAVLVMDEVDGMSAGDRGGVADLIASI- 561
Query: 399 SAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHV 458
K+SK P+ICICND Y+ L+SL +
Sbjct: 562 --------------------KMSK----------IPIICICNDRYSQKLKSLVNYCLLLN 591
Query: 459 FIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVM 518
F +P+ ++ RL I E ++ A+ LAE DIR LN LQ++ + ++
Sbjct: 592 FRKPTKQQMGKRLMEIAKKEGLQAQENAMEELAERVHGDIRMALNHLQYMSLSQSVVKYD 651
Query: 519 DI 520
DI
Sbjct: 652 DI 653
>gi|115485959|ref|NP_001068123.1| Os11g0572100 [Oryza sativa Japonica Group]
gi|108864532|gb|ABA94349.2| BRCA1 C Terminus domain containing protein, expressed [Oryza sativa
Japonica Group]
gi|113645345|dbj|BAF28486.1| Os11g0572100 [Oryza sativa Japonica Group]
gi|215697840|dbj|BAG92033.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1021
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 51/242 (21%)
Query: 296 QDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDR--SSSTI 353
Q KK +G +K +LL GPPG+GKTT A V ++ G +EVNASD R + S I
Sbjct: 446 QKGKGKKQADSGA--KKAVLLSGPPGIGKTTTAKVVSQMLGLQAIEVNASDSRGKADSKI 503
Query: 354 E--------NKILDVVQMNSVMADS-----RPKC-LVIDEIDG-ALGDGKGAVEVILKMV 398
E N I +++ N+ + S RPK LV+DE+DG + GD G ++I +
Sbjct: 504 EKGVGGSTSNSIKELIS-NATLNYSNNRLKRPKAVLVMDEVDGMSAGDRGGVADLIASI- 561
Query: 399 SAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHV 458
K+SK P+ICICND Y+ L+SL +
Sbjct: 562 --------------------KMSK----------IPIICICNDRYSQKLKSLVNYCLLLN 591
Query: 459 FIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVM 518
F +P+ ++ RL I E ++ A+ LAE DIR LN LQ++ + ++
Sbjct: 592 FRKPTKQQMGKRLMEIAKKEGLQAQENAMEELAERVHGDIRMALNHLQYMSLSQSVVKYD 651
Query: 519 DI 520
DI
Sbjct: 652 DI 653
>gi|358365643|dbj|GAA82265.1| chromosome transmission fidelity factor [Aspergillus kawachii IFO
4308]
Length = 1058
Score = 100 bits (248), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 99/225 (44%), Gaps = 48/225 (21%)
Query: 299 WHKKTRST-------GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSS 351
WHK ++ G + +++ GPPG+GKTT AH+ AK GY VVE NASD RS
Sbjct: 501 WHKNAKAGFNKPGKDGSGMYRSVMIHGPPGIGKTTAAHLVAKLEGYDVVETNASDTRSKK 560
Query: 352 TIENKILDVVQMNSVMA---------DSRPK--CLVIDEIDGALGDGKGAVEVILKMVSA 400
+EN +L V+ S+ +S K L++DE+DG +G V + +
Sbjct: 561 LVENGLLGVLDTTSLQGYFSGVGKKVESAKKNLVLIMDEVDGMSAGDRGGVGALASI--- 617
Query: 401 ERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFI 460
KK + P+I ICN+ P ++ + F
Sbjct: 618 -------------------------AKKTHI--PLILICNERRLPKMKPFDHVTYELPFR 650
Query: 461 QPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
+P+ ++ +RL IC E ++ L +L E T DIR +N L
Sbjct: 651 RPTAEQIRARLSTICFREGLRIPPQVLDSLIEGTNADIRQVINML 695
>gi|361131271|gb|EHL02969.1| putative Chromosome transmission fidelity protein 18 [Glarea
lozoyensis 74030]
Length = 511
Score = 100 bits (248), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 112/204 (54%), Gaps = 25/204 (12%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS 370
+K+LLL GPPGLGKTTLAHV A+ GY ++E+NASD+RS ++ +I V SV S
Sbjct: 9 RKILLLTGPPGLGKTTLAHVCARQAGYEIMEINASDERSKDVVKGRIRTSVGTESVKTGS 68
Query: 371 -------------RPKCLVIDEIDGALGDGKGA-----VEVILKMVSAERKSNTAKENVA 412
P C+V+DE+DG +G G+ V+ ++ ++ ++K++ +
Sbjct: 69 TVTSKSGHVQKNAHPLCVVVDEVDGVVGGSGGSGEGGFVKALIDLIQLDQKNSAGVTS-- 126
Query: 413 KEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQ--IAKVHVFIQPSVSRVVSR 470
P KKK L+RP+I ICND+Y P+LR LR +A++ +P + V++R
Sbjct: 127 ---NPGYAKKKKKGDDFRLMRPLILICNDVYHPSLRPLRHSNLAEIIHVRKPPIDAVIAR 183
Query: 471 LKHICNNESMKTSSIALTTLAEYT 494
+K + E + + A+ L E T
Sbjct: 184 MKAVFEKEGVSCDNDAVRRLCEAT 207
>gi|327311518|ref|YP_004338415.1| replication factor C large subunit [Thermoproteus uzoniensis
768-20]
gi|326947997|gb|AEA13103.1| replication factor C large subunit [Thermoproteus uzoniensis
768-20]
Length = 422
Score = 100 bits (248), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 151/348 (43%), Gaps = 55/348 (15%)
Query: 310 EQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMAD 369
E K +LL GPPG+GKTTL H A Y +VE+NASD R++ I + ++ S+
Sbjct: 54 EAKAVLLAGPPGIGKTTLVHALANEINYELVELNASDVRTAERIREVVGRGLREGSLFGY 113
Query: 370 SRPKCLVIDEIDGA-LGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKK 428
+ + ++ DE+DG + G + I+ ++ R
Sbjct: 114 A-GRLILFDEVDGLNPKEDLGGLNSIIDLIETARV------------------------- 147
Query: 429 ASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALT 488
P++ N+ + LR LR ++ V + + VV L+ IC++E +K AL
Sbjct: 148 -----PIVMTANNPWDQRLRPLRDVSLVVSLRRLAEDDVVEVLRRICDSEKIKCEEDALR 202
Query: 489 TLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTK 548
LA ++ D+R+ +N LQ K+ L V DI + VG ++ S F++ +F+
Sbjct: 203 ALARSSDGDLRAAINDLQLFAGGKKTLTVDDI--KRVGERNPQLSMFEVLDRVFRA---- 256
Query: 549 RLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCL 608
N + +S F+ S D++ F EN+ ++ Y DP +D L
Sbjct: 257 ---NWFDDARAIS----FMPSF-----DWEQFFAWASENVPRV-YKDPS--AAAAAMDRL 301
Query: 609 GNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQ 656
+D++ I +T + L Y + + LV KP L YQ
Sbjct: 302 SKADIILARIRKTGEWELMPYMTEIMLAGIALVP--GKPRLPRFFKYQ 347
>gi|290991775|ref|XP_002678510.1| replication factor C large subunit [Naegleria gruberi]
gi|284092123|gb|EFC45766.1| replication factor C large subunit [Naegleria gruberi]
Length = 994
Score = 100 bits (248), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 149/368 (40%), Gaps = 102/368 (27%)
Query: 196 EQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTIS 255
+QLWV+KY P++ ++++ + +L WLK+W + + EI++ S +
Sbjct: 400 DQLWVEKYKPSTSSQIIGHNKECGLLLNWLKEWHANL-DKEIQAASTQTKG--------- 449
Query: 256 QNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLL 315
RK W F
Sbjct: 450 -----------RKKAATEWKRAAF------------------------------------ 462
Query: 316 LCGPPGLGKTTLAHVAAKHCGY-HVVEVNASDDRSSSTIENKILDVVQMNSV------MA 368
L GPPG+GK+T A + AK G+ ++VE+NASD RS ++ +I++ N++
Sbjct: 463 LSGPPGIGKSTSAALIAKEAGFTNIVELNASDSRSKKAMKEQIVESCLSNNISNYFQKKG 522
Query: 369 DSRPK------CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISK 422
+PK +++DE+DG +G V +++++ R
Sbjct: 523 QPKPKDDKQRTIVIMDEVDGMSSGDRGGVVELVQIIKQTR-------------------- 562
Query: 423 KKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKT 482
PVICI ND +L++L F +PS + + +L +C E++
Sbjct: 563 ----------VPVICIANDRSKISLKTLITHCLDLKFSRPSKATITKKLLEVCKKENLSI 612
Query: 483 SSIALTTLAEYTECDIRSCLNTLQFLDK--KKEILNVMDIGSQVVGRKDMSRSAFDIWKE 540
+ AL + E DIRS LN LQ +++ K+ + +D S + + + FD+ K+
Sbjct: 613 DNNALEYMVESLNNDIRSVLNNLQLINRYSAKDHIGYLDAKSSDLTKTSSTDGIFDVVKD 672
Query: 541 IFQKRKTK 548
+ + K
Sbjct: 673 VLGQNSKK 680
>gi|118384400|ref|XP_001025348.1| ATPase, AAA family protein [Tetrahymena thermophila]
gi|89307115|gb|EAS05103.1| ATPase, AAA family protein [Tetrahymena thermophila SB210]
Length = 1242
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 140/311 (45%), Gaps = 62/311 (19%)
Query: 295 IQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIE 354
+Q +W + P + L+ GPPG+GKT+ + A+ +++E NASD R+ + IE
Sbjct: 681 VQGNWKEN------PGSRACLISGPPGIGKTSTVRLLAQKYNMNIIEWNASDVRNKNAIE 734
Query: 355 NKILDVVQMNSVM-----ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKE 409
I++ ++ N+V+ S+ +++DE+DG G + ++K++ +
Sbjct: 735 T-IINPLKDNTVLNFKHEVSSQRSIILMDEVDGMSSGDIGGNQALMKIIKETK------- 786
Query: 410 NVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVS 469
P+ C+CND Y+ LRSL I F +P+ ++
Sbjct: 787 -----------------------NPIFCVCNDRYSQKLRSLASICFDVRFYKPNKGQIAK 823
Query: 470 RLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDI--GSQVVGR 527
RL +C E +K+ L LAE DIR LN LQ KK + ++ + G +
Sbjct: 824 RLLEVCRKEGLKSELNHLEFLAESVNNDIRQALNLLQMQSKKSKDISFKSLVQGLSSFKK 883
Query: 528 KD-MSRSAFDIWKEIFQKRKTKRLRNSVSSSSNV---SNEFDFLHSLISNRG-----DYD 578
D +S SAF++ K L ++ +++ + EFD IS + DY+
Sbjct: 884 DDQVSMSAFEV--------KYSNLEQNIRNAAKILMTKVEFD-RKKQISQKVDLFFLDYE 934
Query: 579 VIFDGIHENIL 589
++ IHEN L
Sbjct: 935 LVPMLIHENYL 945
>gi|159905016|ref|YP_001548678.1| replication factor C large subunit [Methanococcus maripaludis C6]
gi|226739139|sp|A9A6N2.1|RFCL_METM6 RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|159886509|gb|ABX01446.1| AAA ATPase central domain protein [Methanococcus maripaludis C6]
Length = 484
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 138/333 (41%), Gaps = 71/333 (21%)
Query: 310 EQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMAD 369
+QK +LL GPPG GKTTLA+ AK Y V+E+NASD R+ I + S+
Sbjct: 38 KQKPILLAGPPGSGKTTLAYAIAKDYAYDVIELNASDKRNKDVISQVVGTAATSKSITG- 96
Query: 370 SRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKK 428
R +V+DE+DG G D +G V I+K++ EN
Sbjct: 97 -RRTLIVLDEVDGLSGNDDRGGVAEIIKVLK-------TAEN------------------ 130
Query: 429 ASLLRPVICICNDLYAPALRSLR------QIAKVHVFIQPSVSRVVSRLKHICNNESMKT 482
PVI ND+Y PAL +LR + VH P V L+ I E +
Sbjct: 131 -----PVILTANDVYKPALMTLRNNVNLINVGSVHTNSIPPV------LRKIALKEGFEI 179
Query: 483 SSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIF 542
+ T+A + D+R+ +N LQ L L V D ++ + +D +S FD + I
Sbjct: 180 DEKVIKTIASHAGGDLRAAINDLQSLATGGS-LEVED--AKELPDRDSEKSIFDAMRIIM 236
Query: 543 QKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQ--LQYHDPVMLK 600
KT + S++ +V E + IS EN+ + L+Y D
Sbjct: 237 ---KTTHYDIATSATRDVKEELGTIEEWIS-------------ENLPKEYLKYKD----- 275
Query: 601 TVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPL 633
D L SD+ + R Q L+ Y L
Sbjct: 276 LANGYDYLSKSDVFLGRVFRRQYFGLWRYASAL 308
>gi|145232225|ref|XP_001399565.1| replication factor C subunit 1 [Aspergillus niger CBS 513.88]
gi|134056478|emb|CAK37567.1| unnamed protein product [Aspergillus niger]
Length = 1058
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 99/225 (44%), Gaps = 48/225 (21%)
Query: 299 WHKKTRST-------GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSS 351
WHK ++ G + +++ GPPG+GKTT AH+ AK GY VVE NASD RS
Sbjct: 501 WHKNAKAGFNKPGKDGSGMYRSVMIHGPPGIGKTTAAHLVAKLEGYDVVETNASDTRSKK 560
Query: 352 TIENKILDVVQMNSVMA---------DSRPK--CLVIDEIDGALGDGKGAVEVILKMVSA 400
+EN +L V+ S+ +S K L++DE+DG +G V + +
Sbjct: 561 LVENGLLGVLDTTSLQGYFSGVGKKVESAKKNLVLIMDEVDGMSAGDRGGVGALASI--- 617
Query: 401 ERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFI 460
KK + P+I ICN+ P ++ + F
Sbjct: 618 -------------------------AKKTHI--PLILICNERRLPKMKPFDHVTYELPFR 650
Query: 461 QPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
+P+ ++ +RL IC E ++ L +L E T DIR +N L
Sbjct: 651 RPTAEQIRARLSTICFREGLRIPPQVLDSLIEGTNADIRQVINML 695
>gi|149246339|ref|XP_001527639.1| hypothetical protein LELG_00159 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146447593|gb|EDK41981.1| hypothetical protein LELG_00159 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 892
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 120/242 (49%), Gaps = 44/242 (18%)
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASD---------DRSSSTIEN---- 355
P +K+LL+ GPPG+GKT AH+ A+ G++V E+NA++ S ST+ N
Sbjct: 222 PHRKILLIHGPPGVGKTISAHILARQMGFNVQELNAANSMDTLPQASSSSLSTVGNAHAN 281
Query: 356 -------KILDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAK 408
KIL+ + NSV ++P CL+IDE+D +L + V+ +V ++ ++ +K
Sbjct: 282 ASTALKLKILNSLTSNSVSDSTKPSCLLIDELD-SLANVNEVSRVLADLVHSDERATWSK 340
Query: 409 ENVAKEDQPEKISKKKGCKKASLL-RPVICICNDLYAPA--------LRSLRQIAKVHVF 459
+ + KK +K +L RP+ICI ND+YA L +R I++V F
Sbjct: 341 RSYNNDASGRNGDKKSRKRKDKILNRPIICIANDIYARQSGRVGPNPLEKIRAISEVVAF 400
Query: 460 IQPSVSRVVSRLK--------------HICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
+PS+++ + +K + E++ + + E E D R+CLN +
Sbjct: 401 KRPSLAQKATGVKVSGNAMKSVKDFLMSVNEKENLGLDYREIGDICESCEGDFRACLNQM 460
Query: 506 QF 507
QF
Sbjct: 461 QF 462
>gi|304728|gb|AAA28573.1| transcription factor [Drosophila melanogaster]
Length = 986
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 136/319 (42%), Gaps = 59/319 (18%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRS--------SSTIENKILDVVQM 363
K LL GPPG+GKTT A + K G+ VE NASD RS S+ + NK L
Sbjct: 481 KAALLSGPPGIGKTTTATLVVKELGFDAVEFNASDTRSKRLLKDEVSTLLSNKSLSGYFT 540
Query: 364 NSVMADSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISK 422
A SR L++DE+D G + +G ++ ++ ++
Sbjct: 541 GQGQAVSRKHVLIMDEVDAMAGNEDRGGMQELIALI------------------------ 576
Query: 423 KKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKT 482
K +S+ P+IC+CND P +RSL F +P + ++ ++ IC E +K
Sbjct: 577 ----KDSSI--PIICMCNDRNHPKIRSLVNYCYDLRFQRPRLEQIKGKIMSICFKEKVKI 630
Query: 483 SSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIF 542
S + + T DIR +N + L K+ + Q V KD+ +++ +++F
Sbjct: 631 SPAKVEEIIAATNNDIRQSINHIALLSAKE---DASQKSGQQVATKDLKLGPWEVVRKVF 687
Query: 543 QKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQL---QYHDPVML 599
+ K + S + S++ F H DY + + +N LQ+ V+
Sbjct: 688 TADEHKHM--SFADKSDL-----FFH-------DYSLAPLFVQQNYLQVLPQGNKKDVLA 733
Query: 600 KTVKCLDCLGNSDLMHQYI 618
K D L DL+ + I
Sbjct: 734 KVAATADALSLGDLVEKRI 752
>gi|340522013|gb|EGR52246.1| replication factor C, subunit 1-like protein [Trichoderma reesei
QM6a]
Length = 1028
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 41/216 (18%)
Query: 301 KKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDV 360
+K + G ++ +++ GPPG+GKTT AH+AAK GY V+E NASD RS +E + DV
Sbjct: 509 QKRGADGMGGERAIIISGPPGIGKTTAAHLAAKLEGYDVLESNASDTRSKKLVEAGLSDV 568
Query: 361 VQMNSVMA-----------DSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKE 409
+ S++ + + L++DE+DG +G V + K
Sbjct: 569 MNNTSLLGFFAGDGKSVHSEKKKIVLIMDEVDGMSAGDRGGVGALAKF------------ 616
Query: 410 NVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVS 469
C+K + P+I ICN+ P ++ +A F +P+V +V S
Sbjct: 617 ----------------CRKTEV--PLILICNERRLPKMKPFDHVAFDIRFNRPTVDQVRS 658
Query: 470 RLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
R+ IC+ E +K + L E + DIR +N +
Sbjct: 659 RIMTICHREGLKMPPPVVDALIEGSNKDIRQIINMI 694
>gi|350634492|gb|EHA22854.1| hypothetical protein ASPNIDRAFT_52205 [Aspergillus niger ATCC 1015]
Length = 1035
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 99/225 (44%), Gaps = 48/225 (21%)
Query: 299 WHKKTRST-------GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSS 351
WHK ++ G + +++ GPPG+GKTT AH+ AK GY VVE NASD RS
Sbjct: 478 WHKNAKAGFNKPGKDGSGMYRSVMIHGPPGIGKTTAAHLVAKLEGYDVVETNASDTRSKK 537
Query: 352 TIENKILDVVQMNSVMA---------DSRPK--CLVIDEIDGALGDGKGAVEVILKMVSA 400
+EN +L V+ S+ +S K L++DE+DG +G V + +
Sbjct: 538 LVENGLLGVLDTTSLQGYFSGVGKKVESAKKNLVLIMDEVDGMSAGDRGGVGALASI--- 594
Query: 401 ERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFI 460
KK + P+I ICN+ P ++ + F
Sbjct: 595 -------------------------AKKTHI--PLILICNERRLPKMKPFDHVTYELPFR 627
Query: 461 QPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
+P+ ++ +RL IC E ++ L +L E T DIR +N L
Sbjct: 628 RPTAEQIRARLSTICFREGLRIPPQVLDSLIEGTNADIRQVINML 672
>gi|119481305|ref|XP_001260681.1| chromosome transmission fidelity factor [Neosartorya fischeri NRRL
181]
gi|119408835|gb|EAW18784.1| chromosome transmission fidelity factor [Neosartorya fischeri NRRL
181]
Length = 1064
Score = 99.8 bits (247), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 117/273 (42%), Gaps = 66/273 (24%)
Query: 298 SWHKKTR-------STGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSS 350
+WHK + G + +++ GPPG+GKTT AH+ A GY VVE NASD RS
Sbjct: 505 NWHKNAKFNFSRPGKDGSGVYRAVMIHGPPGIGKTTAAHLVANLEGYDVVETNASDTRSK 564
Query: 351 STIENKILDVVQMNSVMA---------DSRPK--CLVIDEIDGALGDGKGAVEVILKMVS 399
+E+ +LD++ S+ +S K L++DE+DG +G V ++ +
Sbjct: 565 KLVESNLLDILDTTSLQGYFSGEGKKIESTKKNLVLIMDEVDGMSAGDRGGVGALVSL-- 622
Query: 400 AERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVF 459
KK + P+I ICN+ P ++ + F
Sbjct: 623 --------------------------AKKTHI--PLILICNERRLPKMKPFDHVTYELPF 654
Query: 460 IQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFL---------DK 510
+P+ ++ +RL IC E +K L +L E T DIR +N L + DK
Sbjct: 655 RRPTAEQIRARLSTICFREGLKIPPPVLDSLIEGTNADIRQVINMLSTVKLDQQHLDFDK 714
Query: 511 KKE---------ILNVMDIGSQVVGRKDMSRSA 534
KE IL DI S+++ + S S+
Sbjct: 715 GKEMSKAWQKHVILKPWDIVSKILNAQTFSPSS 747
>gi|213972533|ref|NP_001135428.1| germ line transcription factor 1 [Nasonia vitripennis]
Length = 1100
Score = 99.8 bits (247), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 147/357 (41%), Gaps = 69/357 (19%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQ---MNSVMA 368
K LL GPPG+GKTT A+V GY V+E NASD RS ++ +I ++ + S +
Sbjct: 600 KAALLSGPPGIGKTTTAYVVCAQLGYEVLEFNASDTRSKKLLQEEIAGILSNKTVKSFLT 659
Query: 369 DSRPK-------CLVIDEIDGALG--DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEK 419
+ + K L++DE+DG G D G E+I + S E
Sbjct: 660 NGQEKKKNPPKHVLLMDEVDGMAGNEDRGGMQELIAFIKSTEV----------------- 702
Query: 420 ISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNES 479
P+ICICND + +++L F +P + ++ + + +C E
Sbjct: 703 --------------PIICICNDRMSQKIKTLANYTFDLRFQKPRLEQIRAAMMSMCYKEG 748
Query: 480 MKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWK 539
+ ++ LT + + T DIR +N + L K + + K++ +D+ +
Sbjct: 749 ITVTAPELTAIIQSTNQDIRQVINHVAMLSAKSQ---TEKESHEKTKYKNLKLGPWDVVR 805
Query: 540 EIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDP--- 596
++F + K + S+ S++ F H DY++ + EN L + P
Sbjct: 806 KVFSADEHKNM--SIHDKSDL-----FFH-------DYNIAGLFVEENYLSVTPSGPRNE 851
Query: 597 VMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQP------PLAITVHRLVSQIQKP 647
+ K KC D L D + I Q L Q P ++ + SQI P
Sbjct: 852 LFDKLAKCSDSLAIGDTIENAIRGKQAWGLLPVQACFSSVIPGSVMSGFINSQINFP 908
>gi|83769742|dbj|BAE59877.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1054
Score = 99.8 bits (247), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 96/225 (42%), Gaps = 48/225 (21%)
Query: 299 WHKKTRST-------GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSS 351
WHK + G + +++ GPPG+GKTT AH+ AK GY +VE NASD RS
Sbjct: 497 WHKNAKGNFSKPGKDGTGIYRAVMIHGPPGIGKTTAAHLVAKLEGYDIVETNASDTRSKK 556
Query: 352 TIENKILDVVQMNSVMA-----------DSRPKCLVIDEIDGALGDGKGAVEVILKMVSA 400
+E +L V+ S+ + + L++DE+DG +G V + +
Sbjct: 557 LVETGLLGVLDTTSLQGYFAADGQKVHREKKNMVLIMDEVDGMSAGDRGGVGALAAI--- 613
Query: 401 ERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFI 460
KK + P+I ICN+ P ++ + F
Sbjct: 614 -------------------------AKKTHI--PLILICNERRLPKMKPFDHVTYELPFR 646
Query: 461 QPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
+P+ ++ +RL IC E +K L +L E T DIR +N L
Sbjct: 647 RPTAEQIRARLSTICFREGLKIPPPVLDSLIEGTHADIRQIINML 691
>gi|159477641|ref|XP_001696917.1| DNA replication factor C complex subunit 1 [Chlamydomonas
reinhardtii]
gi|158274829|gb|EDP00609.1| DNA replication factor C complex subunit 1 [Chlamydomonas
reinhardtii]
Length = 1182
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 116/257 (45%), Gaps = 54/257 (21%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV--MA 368
+K LL GPPG+GKT+ AH+ A+ G+ VVE+NASD R+ + ++ + Q N + M
Sbjct: 596 KKAALLSGPPGIGKTSAAHIMAREAGFEVVEMNASDTRNKAGKTSEGIAGKQSNIIKEMV 655
Query: 369 DS---------------------RPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTA 407
S R + L++DE+DG G +G V+ ++ +
Sbjct: 656 TSTTLPPGLFGGGCGGGLGSTAPRRQLLIMDEVDGMSGGDRGGVQDLIDTI--------- 706
Query: 408 KENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRV 467
K++ + P+ICICND Y L+SLR F +P+V ++
Sbjct: 707 -------------------KRSKI--PIICICNDKYNQKLKSLRNHCLELEFRKPTVLQI 745
Query: 468 VSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVG- 526
R+ I E + + + L D+R L LQ + + ++ D+ S +G
Sbjct: 746 SKRMSEIAAKEGLAINQATMDALVTGAGGDLRLILGQLQMVRLRSVAVSFDDVRSGRLGS 805
Query: 527 RKDMSRSAFDIWKEIFQ 543
KDM RS F+ +++ +
Sbjct: 806 SKDMDRSPFECSRQLLE 822
>gi|374327675|ref|YP_005085875.1| replication factor C large subunit [Pyrobaculum sp. 1860]
gi|356642944|gb|AET33623.1| replication factor C large subunit [Pyrobaculum sp. 1860]
Length = 422
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 162/354 (45%), Gaps = 59/354 (16%)
Query: 299 WHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKIL 358
W KK + E + +LL GPPG+GKTT+ H A+ Y ++E+NASD R++ + +
Sbjct: 45 WAKK-KDREITEARAVLLAGPPGVGKTTIVHALAREIRYELIELNASDVRTAERLRQVVG 103
Query: 359 DVVQMNSVMADSRPKCLVIDEIDGA-LGDGKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
++ +S+ K ++ DE+DG + + KG +E I+ +V TAK
Sbjct: 104 SGLRESSLFG-YEGKIVLFDEVDGLHVKEDKGGLEAIIDIV------ETAKV-------- 148
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
P++ N+ Y P R LR ++ V + S VV L+ IC N
Sbjct: 149 ----------------PIVMTANNPYDPKFRPLRDLSLVVNLRRLSEDEVVEVLRRICVN 192
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQ-FLDKKKEILNVMDIGSQVVGRKDMSRSAFD 536
E K AL ++A+ + D+R+ +N LQ +L +++L + DI + G ++ S F+
Sbjct: 193 EGAKCEDEALRSIAKSSMGDLRAAINDLQMYLTGGRKMLVLDDI--KRAGERNPQLSMFE 250
Query: 537 IWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDP 596
I +++ R R +VS + + E F+ +L S + + Y D
Sbjct: 251 ILDRVYKARWFDEAR-AVSFNPSFDWEQYFVWALES----------------IPVVYKDL 293
Query: 597 VMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQ-KPNL 649
+ T D L +D+ I R Q+ L Y LA+ VSQI+ KP L
Sbjct: 294 EAMST--AYDRLSKADVFIGRIKRMQEWELLPYAMELALGG---VSQIKDKPRL 342
>gi|317147094|ref|XP_001821879.2| replication factor C subunit 1 [Aspergillus oryzae RIB40]
Length = 1056
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 96/225 (42%), Gaps = 48/225 (21%)
Query: 299 WHKKTRST-------GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSS 351
WHK + G + +++ GPPG+GKTT AH+ AK GY +VE NASD RS
Sbjct: 499 WHKNAKGNFSKPGKDGTGIYRAVMIHGPPGIGKTTAAHLVAKLEGYDIVETNASDTRSKK 558
Query: 352 TIENKILDVVQMNSVMA-----------DSRPKCLVIDEIDGALGDGKGAVEVILKMVSA 400
+E +L V+ S+ + + L++DE+DG +G V + +
Sbjct: 559 LVETGLLGVLDTTSLQGYFAADGQKVHREKKNMVLIMDEVDGMSAGDRGGVGALAAI--- 615
Query: 401 ERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFI 460
KK + P+I ICN+ P ++ + F
Sbjct: 616 -------------------------AKKTHI--PLILICNERRLPKMKPFDHVTYELPFR 648
Query: 461 QPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
+P+ ++ +RL IC E +K L +L E T DIR +N L
Sbjct: 649 RPTAEQIRARLSTICFREGLKIPPPVLDSLIEGTHADIRQIINML 693
>gi|391868818|gb|EIT78027.1| replication factor C, subunit RFC1 [Aspergillus oryzae 3.042]
Length = 1078
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 96/225 (42%), Gaps = 48/225 (21%)
Query: 299 WHKKTRST-------GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSS 351
WHK + G + +++ GPPG+GKTT AH+ AK GY +VE NASD RS
Sbjct: 517 WHKNAKGNFSKPGKDGTGIYRAVMIHGPPGIGKTTAAHLVAKLEGYDIVETNASDTRSKK 576
Query: 352 TIENKILDVVQMNSVMA-----------DSRPKCLVIDEIDGALGDGKGAVEVILKMVSA 400
+E +L V+ S+ + + L++DE+DG +G V + +
Sbjct: 577 LVETGLLGVLDTTSLQGYFAADGQKVHREKKNMVLIMDEVDGMSAGDRGGVGALAAI--- 633
Query: 401 ERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFI 460
KK + P+I ICN+ P ++ + F
Sbjct: 634 -------------------------AKKTHI--PLILICNERRLPKMKPFDHVTYELPFR 666
Query: 461 QPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
+P+ ++ +RL IC E +K L +L E T DIR +N L
Sbjct: 667 RPTAEQIRARLSTICFREGLKIPPPVLDSLIEGTHADIRQIINML 711
>gi|195497183|ref|XP_002095995.1| GE25440 [Drosophila yakuba]
gi|194182096|gb|EDW95707.1| GE25440 [Drosophila yakuba]
Length = 986
Score = 99.4 bits (246), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 139/319 (43%), Gaps = 59/319 (18%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRS--------SSTIENKILDVVQM 363
K LL GPPG+GKTT A + K G+ VE NASD RS S+ + NK L
Sbjct: 491 KAALLSGPPGIGKTTTATLVVKELGFDAVEFNASDTRSKRLLKDEVSTLLSNKSLSGYFT 550
Query: 364 NSVMADSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISK 422
+ A SR L++DE+DG G + +G ++ ++ ++
Sbjct: 551 GNGQAVSRKHVLIMDEVDGMAGNEDRGGMQELIALI------------------------ 586
Query: 423 KKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKT 482
K +S+ P+IC+CND P +RSL F +P + ++ ++ IC E +K
Sbjct: 587 ----KDSSI--PIICMCNDRNHPKIRSLVNYCFDLRFQRPRLEQIKGKIMSICFKEKVKI 640
Query: 483 SSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIF 542
S + + T DIR +N + L K+ + Q V KD+ +++ +++F
Sbjct: 641 SPAKVEEIIAATNNDIRQSINHIALLSAKE---DASQKSGQQVATKDLKLGPWEVVRKVF 697
Query: 543 QKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQL---QYHDPVML 599
+ K + +++ S++ F H DY + + +N LQ+ ++
Sbjct: 698 TADEHKHM--TLADKSDL-----FFH-------DYSLAPLFVQQNFLQVLPQGNKKDLLA 743
Query: 600 KTVKCLDCLGNSDLMHQYI 618
K D L DL+ + I
Sbjct: 744 KVATTADALSLGDLVDKRI 762
>gi|449705511|gb|EMD45540.1| replication factor C large subunit, putative [Entamoeba histolytica
KU27]
Length = 718
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 117/244 (47%), Gaps = 42/244 (17%)
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA 368
P+++ +LL G PG+GKTT++ + K G++ +E NASD R+ S+IE I + +
Sbjct: 280 PDRRAVLLAGAPGVGKTTVSKIVGKTLGFNPIEFNASDTRNKSSIELAIKRIFLNGQISI 339
Query: 369 DS---RPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKG 425
D + +++DE+DG +G + ++K + KE +
Sbjct: 340 DGSKNKKPLIIMDEVDGMSSGDRGGITELVKYI--------------KETE--------- 376
Query: 426 CKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSI 485
+P++CICND+ ++ L + + F + SVS + RLK+IC+ E + S
Sbjct: 377 -------QPIVCICNDIMDKKMQPLINVCETINFSKISVSELTERLKYICDKEGVHVSDE 429
Query: 486 ALTTLAEYTECDIRSCLNTLQ-------FLDKKKEILNVMDIGSQVVGRKDMSRSAFDIW 538
L +A D+R +N LQ L +K E ++ ++I ++ R S ++F
Sbjct: 430 NLNQIASKAHGDVRYGINMLQSFVKCGVTLGEKNEDVDYVEIVPTLITR--YSSTSFIEK 487
Query: 539 KEIF 542
EIF
Sbjct: 488 NEIF 491
>gi|403177362|ref|XP_003888779.1| replication factor C subunit 1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375172838|gb|EHS64742.1| replication factor C subunit 1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 776
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 96/201 (47%), Gaps = 37/201 (18%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA--- 368
+ ++L GPPG+GKT+ AH+ AK GY V+E+NASD RS +E D++ +S+
Sbjct: 232 RCVVLSGPPGVGKTSAAHLVAKAEGYEVIELNASDTRSKKLLETGFKDIIGNSSIAGFLE 291
Query: 369 ----DSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKK 424
S L++DE+DG +G V + ++
Sbjct: 292 TSTKRSEKLVLIMDEVDGMSAGDRGGVGALNALI-------------------------- 325
Query: 425 GCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSS 484
KK+ + P+I I ND+ P ++ L+ A VF +P+V+ + SR+ I E MK
Sbjct: 326 --KKSQI--PIIAIANDMSIPKMKPLKATALSLVFRRPNVNMIRSRMMSIAFKEGMKIPP 381
Query: 485 IALTTLAEYTECDIRSCLNTL 505
A+ L ++ DIR +N L
Sbjct: 382 NAIDQLVAGSQSDIRQIINML 402
>gi|320586272|gb|EFW98951.1| DNA replication factor c subunit [Grosmannia clavigera kw1407]
Length = 1507
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 93/205 (45%), Gaps = 41/205 (20%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSR 371
+ +++ GPPG+GKTT AH+AA + V+E NASD RS +E+ I D + S++
Sbjct: 969 RAIIISGPPGIGKTTAAHLAANLADHDVIETNASDTRSKKLVESGIGDTMDNTSLLGFFA 1028
Query: 372 PK-----------CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
P L++DE+DG +G + + K
Sbjct: 1029 PDGKKVDTTKKNVVLIMDEVDGMSAGDRGGIGALAKF----------------------- 1065
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
CKK + P+I ICN+ P +R +A F +P+V ++ SR+ IC+ E +
Sbjct: 1066 -----CKKTEV--PLILICNERRLPKMRPFDHVAFDLRFNRPTVDQIRSRVMTICHREGL 1118
Query: 481 KTSSIALTTLAEYTECDIRSCLNTL 505
K + L E T DIR +N L
Sbjct: 1119 KLPPTVVDALIEGTNKDIRQIINML 1143
>gi|67467166|ref|XP_649703.1| Activator 1 140 kDa subunit [Entamoeba histolytica HM-1:IMSS]
gi|56466194|gb|EAL44317.1| Activator 1 140 kDa subunit, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 718
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 117/244 (47%), Gaps = 42/244 (17%)
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA 368
P+++ +LL G PG+GKTT++ + K G++ +E NASD R+ S+IE I + +
Sbjct: 280 PDRRAVLLAGAPGVGKTTVSKIVGKTLGFNPIEFNASDTRNKSSIELAIKRIFLNGQISI 339
Query: 369 DS---RPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKG 425
D + +++DE+DG +G + ++K + KE +
Sbjct: 340 DGSKNKKPLIIMDEVDGMSSGDRGGITELVKYI--------------KETE--------- 376
Query: 426 CKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSI 485
+P++CICND+ ++ L + + F + SVS + RLK+IC+ E + S
Sbjct: 377 -------QPIVCICNDIMDKKMQPLINVCETINFSKISVSELTERLKYICDKEGVHVSDE 429
Query: 486 ALTTLAEYTECDIRSCLNTLQ-------FLDKKKEILNVMDIGSQVVGRKDMSRSAFDIW 538
L +A D+R +N LQ L +K E ++ ++I ++ R S ++F
Sbjct: 430 NLNQIASKAHGDVRYGINMLQSFVKCGVTLGEKNEDVDYVEIVPTLITR--YSSTSFIEK 487
Query: 539 KEIF 542
EIF
Sbjct: 488 NEIF 491
>gi|347828480|emb|CCD44177.1| hypothetical protein [Botryotinia fuckeliana]
Length = 1069
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 107/244 (43%), Gaps = 59/244 (24%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA--- 368
+ +++ GPPG+GKTT AH+AAK GY ++E NASD RS +E + +V+ SV+
Sbjct: 528 RAIIIHGPPGIGKTTAAHLAAKLAGYDILERNASDVRSKKLVETGLSEVLNNTSVLGYFA 587
Query: 369 ------DSRPK--CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
D K L++DE+DG +G V + K+
Sbjct: 588 GDGKDVDKTKKKLVLIMDEVDGMSSGDRGGVGALAKI----------------------- 624
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
CK + P+I ICND P ++ + F +P+V V SR+ IC+ E M
Sbjct: 625 -----CKTTDI--PMILICNDRKLPKMKPFDFVTFDMPFRRPTVDMVRSRIATICHREGM 677
Query: 481 KTSSIALTTLAEYTECDIRSCLN---------TLQFLDKKKE---------ILNVMDIGS 522
K + L E + DIR +N T D+ KE +L DI S
Sbjct: 678 KLPVQVIDALIEGSNKDIRQIINMISTVKLDQTAMNFDQGKEMSKAWEKHVVLKPWDITS 737
Query: 523 QVVG 526
Q++G
Sbjct: 738 QLLG 741
>gi|255946327|ref|XP_002563931.1| Pc20g14550 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588666|emb|CAP86784.1| Pc20g14550 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1053
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 156/368 (42%), Gaps = 83/368 (22%)
Query: 299 WH-------KKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSS 351
WH KK G + +++ GPPG+GKTT AH+ AK G+ VVE NASD RS
Sbjct: 503 WHASAQADFKKGGKDGSGIYRAVIIHGPPGIGKTTAAHLVAKLEGFDVVETNASDTRSKK 562
Query: 352 TIENKILDVVQMNS-----------VMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSA 400
+E+ L V+ S V ++ R L++DE+DG +G V + +V
Sbjct: 563 LVESSTLGVLDTTSLQGYFAGHGKQVESEKRKLVLIMDEVDGMSAGDRGGVGAVAAIV-- 620
Query: 401 ERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFI 460
KK + PVI ICN+ ++ I F
Sbjct: 621 --------------------------KKTKI--PVILICNERKIQKMKPFDFITYDVPFR 652
Query: 461 QPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDI 520
+P+ ++ +RL IC E +K L L E T DIR +N L ++ LN D
Sbjct: 653 RPTAEQIRARLSTICFREGLKIPPPVLDGLIEGTHADIRQVINMLSTARLDQKGLN-YDE 711
Query: 521 GSQVVG--RKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYD 578
G Q+ K++ +DI +I + S SS+S ++++ + + D++
Sbjct: 712 GKQMSKSWEKNIILKPWDIVSKILSAQMF-----SPSSTSTLNDKVELYFN------DHE 760
Query: 579 VIFDGIHENILQLQYHDPVM----------LKTVKCLD----CLGNSDLMHQYIMRTQQ- 623
+ + EN L+ + P + LK+++ +D + + DL+ + I TQQ
Sbjct: 761 FSYLMLQENYLKTK---PALAGKYQGKEQRLKSLELMDNAASSISDGDLVDRMIHGTQQQ 817
Query: 624 ---MPLYV 628
MP +
Sbjct: 818 WSLMPTHA 825
>gi|7493936|pir||T18306 replication factor C protein - Emericella nidulans
gi|2258283|gb|AAB63574.1| replication factor C like protein [Emericella nidulans]
gi|27735373|gb|AAB63523.2| replication factor C like protein [Emericella nidulans]
Length = 1092
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 94/203 (46%), Gaps = 41/203 (20%)
Query: 314 LLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNS-------- 365
+++ GPPG+GKTT AH+ AK GY VVE NASD RS +E+ +L V+ S
Sbjct: 522 VMIHGPPGIGKTTAAHLVAKLEGYDVVESNASDTRSKKLVESGLLGVLDTTSLQGYFSTS 581
Query: 366 ---VMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISK 422
V + + L++DE+DG M + +R A +AK+ Q
Sbjct: 582 NKKVESGKKNLVLIMDEVDG--------------MSAGDRGGVGAMAAIAKKTQI----- 622
Query: 423 KKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKT 482
P+I ICN+ P ++ + F +P+V +V +RL IC E MK
Sbjct: 623 -----------PLILICNERRLPKMKPFDHVTFEIPFRRPTVEQVRARLLTICFREKMKI 671
Query: 483 SSIALTTLAEYTECDIRSCLNTL 505
L +L E T DIR +N L
Sbjct: 672 PPQVLDSLIEGTHADIRQVINML 694
>gi|67540266|ref|XP_663907.1| hypothetical protein AN6303.2 [Aspergillus nidulans FGSC A4]
gi|40739497|gb|EAA58687.1| hypothetical protein AN6303.2 [Aspergillus nidulans FGSC A4]
gi|259479483|tpe|CBF69746.1| TPA: Replication factor C like protein
[Source:UniProtKB/TrEMBL;Acc:P78622] [Aspergillus
nidulans FGSC A4]
Length = 1092
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 94/203 (46%), Gaps = 41/203 (20%)
Query: 314 LLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNS-------- 365
+++ GPPG+GKTT AH+ AK GY VVE NASD RS +E+ +L V+ S
Sbjct: 522 VMIHGPPGIGKTTAAHLVAKLEGYDVVESNASDTRSKKLVESGLLGVLDTTSLQGYFSTS 581
Query: 366 ---VMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISK 422
V + + L++DE+DG M + +R A +AK+ Q
Sbjct: 582 NKKVESGKKNLVLIMDEVDG--------------MSAGDRGGVGAMAAIAKKTQI----- 622
Query: 423 KKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKT 482
P+I ICN+ P ++ + F +P+V +V +RL IC E MK
Sbjct: 623 -----------PLILICNERRLPKMKPFDHVTFEIPFRRPTVEQVRARLLTICFREKMKI 671
Query: 483 SSIALTTLAEYTECDIRSCLNTL 505
L +L E T DIR +N L
Sbjct: 672 PPQVLDSLIEGTHADIRQVINML 694
>gi|70606692|ref|YP_255562.1| replication factor C large subunit [Sulfolobus acidocaldarius DSM
639]
gi|449066915|ref|YP_007433997.1| replication factor C large subunit [Sulfolobus acidocaldarius N8]
gi|449069187|ref|YP_007436268.1| replication factor C large subunit [Sulfolobus acidocaldarius
Ron12/I]
gi|73914010|sp|Q4JAB1.1|RFCL_SULAC RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|68567340|gb|AAY80269.1| replication factor C [Sulfolobus acidocaldarius DSM 639]
gi|449035423|gb|AGE70849.1| replication factor C large subunit [Sulfolobus acidocaldarius N8]
gi|449037695|gb|AGE73120.1| replication factor C large subunit [Sulfolobus acidocaldarius
Ron12/I]
Length = 437
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 130/288 (45%), Gaps = 50/288 (17%)
Query: 307 GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV 366
G P K +LL GPPG+GKTTLA A+ ++E+NASD R+ I++ + + ++
Sbjct: 37 GEPTAKAVLLYGPPGVGKTTLAEALARDYKLELLEMNASDSRNLRDIKD-VAERASISGS 95
Query: 367 MADSRPKCLVIDEIDGALGDG-KGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKG 425
+ + K +++DEIDG GA+ IL+++ +
Sbjct: 96 LFGIKGKIILLDEIDGIYSRADAGAIPAILELIEKTK----------------------- 132
Query: 426 CKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSI 485
PVI ND + P+LRSLR K+ + + LK IC E +
Sbjct: 133 -------YPVILTANDPWDPSLRSLRNAVKMIELKRLGKYPLKRLLKRICEKEKIVCIDE 185
Query: 486 ALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKR 545
AL + E +E D R C+N LQ + + + +D ++V RKD F+ +++F +
Sbjct: 186 ALDHIIEQSEGDARYCINMLQGIAEGYGKVT-LDNVKELVRRKDRELDPFETLRDVFWAK 244
Query: 546 KTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQY 593
+ +N+V++S + DY+++ ENI LQY
Sbjct: 245 YYWQAKNAVTNS----------------QVDYELLMRWFDENI-PLQY 275
>gi|358386822|gb|EHK24417.1| hypothetical protein TRIVIDRAFT_168290 [Trichoderma virens Gv29-8]
Length = 1045
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 96/206 (46%), Gaps = 41/206 (19%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM--- 367
++ +++ GPPG+GKTT AH+AAK GY V+E NASD RS +E + DV+ S++
Sbjct: 509 ERAIIISGPPGIGKTTAAHLAAKLEGYDVLESNASDTRSKKLVEAGVSDVMNNTSLLGFF 568
Query: 368 --------ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEK 419
A + L++DE+DG +G V + K
Sbjct: 569 AGDGKSVDATKKKIVLIMDEVDGMSAGDRGGVGALAKF---------------------- 606
Query: 420 ISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNES 479
C+K + P+I ICN+ P ++ A F +P+V +V SR+ IC+ E
Sbjct: 607 ------CRKTEV--PLILICNERKLPKMKPFDHAAFDIRFNRPTVDQVRSRIMTICHREG 658
Query: 480 MKTSSIALTTLAEYTECDIRSCLNTL 505
+K + L E + DIR +N +
Sbjct: 659 LKLPPPVVDALIEGSNKDIRQIINMI 684
>gi|154301785|ref|XP_001551304.1| hypothetical protein BC1G_10044 [Botryotinia fuckeliana B05.10]
Length = 1054
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 107/244 (43%), Gaps = 59/244 (24%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA--- 368
+ +++ GPPG+GKTT AH+AAK GY ++E NASD RS +E + +V+ SV+
Sbjct: 513 RAIIIHGPPGIGKTTAAHLAAKLAGYDILERNASDVRSKKLVETGLSEVLNNTSVLGYFA 572
Query: 369 ------DSRPK--CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
D K L++DE+DG +G V + K+
Sbjct: 573 GDGKDVDKTKKKLVLIMDEVDGMSSGDRGGVGALAKI----------------------- 609
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
CK + P+I ICND P ++ + F +P+V V SR+ IC+ E M
Sbjct: 610 -----CKTTDI--PMILICNDRKLPKMKPFDFVTFDMPFRRPTVDMVRSRIATICHREGM 662
Query: 481 KTSSIALTTLAEYTECDIRSCLN---------TLQFLDKKKE---------ILNVMDIGS 522
K + L E + DIR +N T D+ KE +L DI S
Sbjct: 663 KLPVQVIDALIEGSNKDIRQIINMISTVKLDQTAMNFDQGKEMSKAWEKHVVLKPWDITS 722
Query: 523 QVVG 526
Q++G
Sbjct: 723 QLLG 726
>gi|331246527|ref|XP_003335896.1| replication factor C subunit 1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1470
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 96/201 (47%), Gaps = 37/201 (18%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA--- 368
+ ++L GPPG+GKT+ AH+ AK GY V+E+NASD RS +E D++ +S+
Sbjct: 231 RCVVLSGPPGVGKTSAAHLVAKAEGYEVIELNASDTRSKKLLETGFKDIIGNSSIAGFLE 290
Query: 369 ----DSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKK 424
S L++DE+DG +G V + ++
Sbjct: 291 TSTKRSEKLVLIMDEVDGMSAGDRGGVGALNALI-------------------------- 324
Query: 425 GCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSS 484
KK+ + P+I I ND+ P ++ L+ A VF +P+V+ + SR+ I E MK
Sbjct: 325 --KKSQI--PIIAIANDMSIPKMKPLKATALSLVFRRPNVNMIRSRMMSIAFKEGMKIPP 380
Query: 485 IALTTLAEYTECDIRSCLNTL 505
A+ L ++ DIR +N L
Sbjct: 381 NAIDQLVAGSQSDIRQIINML 401
>gi|302564339|ref|NP_001082960.2| replication factor C subunit 1 [Danio rerio]
Length = 1147
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 124/568 (21%), Positives = 204/568 (35%), Gaps = 153/568 (26%)
Query: 198 LWVDKYAPNSFTELLS---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTI 254
LWVDKY P S L+ D+ ++L WL+ W + HS
Sbjct: 577 LWVDKYRPRSLKNLIGQQGDQSCANKLLRWLQSWH-------------------KHHSGN 617
Query: 255 SQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVL 314
++ F K+ G+ + K
Sbjct: 618 AKAPAPKFGKFGSKDDGSGF-------------------------------------KAA 640
Query: 315 LLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV-------- 366
LL GPPG+GKTT A + + GY VE+NAS RS ++++ I + + S+
Sbjct: 641 LLSGPPGVGKTTTAALVCEELGYSYVEMNASCTRSKNSLKEVIAESLNNTSIKNFYTGAS 700
Query: 367 MADSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKG 425
S L++DE+DG G + +G ++ ++ ++ + KI
Sbjct: 701 QTVSSKHVLIMDEVDGMAGNEDRGGIQEMIGLI-----------------KQSKI----- 738
Query: 426 CKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSI 485
P+IC+CND +RSL F +P V ++ + I E +K
Sbjct: 739 --------PIICMCNDRNHQKIRSLANYCYDLRFQRPRVEQIKGAMMSIAFKEGLKIPPP 790
Query: 486 ALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV-VGRKDMSRSAFDIWKEIFQK 544
AL + + DIR L+ L K +++ + +KDM FD+ +++F
Sbjct: 791 ALNEVILASNQDIRQVLHNLSMWSAKDKVMTYDQAKADANNAKKDMKLGPFDVCRKVFA- 849
Query: 545 RKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQ---------LQYHD 595
L + S + F H DY + + EN L L+ H
Sbjct: 850 -----LGEETAHMSLIDKSDLFFH-------DYSLAPLFVQENYLHVRPAAAGGNLKSHL 897
Query: 596 PVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSY 655
++ KT D + + DL+ + I Q L P AI L ++ +
Sbjct: 898 VLLSKTA---DSICDGDLVDRQIRSKQTWSLL---PTQAIYASVLPGELMR--------- 942
Query: 656 QRYRNAFMEKMDIFKSW---------HSKIPPYISRHLSTESLVEDSISPLLHILSPPTL 706
+M + F SW HS+I ++ H+S ++L L ++ P L
Sbjct: 943 -----GYMSQFPNFPSWLGKFSSSGKHSRIIQELASHMSLKTLSSKEAVNLDYL---PYL 994
Query: 707 RPVALHLLSAKEKNDLAQLVSAMVSYSL 734
R L L + Q V M Y +
Sbjct: 995 RSAVLKPLQSLGSEGANQSVKLMDDYDI 1022
>gi|19113399|ref|NP_596607.1| DNA replication factor C complex subunit Rfc1 [Schizosaccharomyces
pombe 972h-]
gi|30913227|sp|O60182.1|RFC1_SCHPO RecName: Full=Replication factor C subunit 1; Short=Replication
factor C1
gi|3116125|emb|CAA18875.1| DNA replication factor C complex subunit Rfc1 [Schizosaccharomyces
pombe]
Length = 934
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 108/232 (46%), Gaps = 51/232 (21%)
Query: 293 KGIQDSWHKKTRST----GPPE---QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNAS 345
K +QD +HK +S GP K +LL GPPG+GKTT AH+ AK GY V+E+NAS
Sbjct: 385 KWLQD-YHKNRKSNFNKPGPDGLGLYKAVLLSGPPGIGKTTAAHLVAKLEGYDVLELNAS 443
Query: 346 DDRSSSTIENKILDVVQMNSV------------MADSRPKCLVIDEIDGALGDGKGAVEV 393
D RS ++ ++ V S+ MA SR L++DEIDG +G V
Sbjct: 444 DTRSKRLLDEQLFGVTDSQSLAGYFGTKANPVDMAKSR-LVLIMDEIDGMSSGDRGGVGQ 502
Query: 394 ILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQI 453
+ ++ K S++ P+ICICND P LR L +
Sbjct: 503 LNMII-----------------------------KKSMI-PIICICNDRAHPKLRPLDRT 532
Query: 454 AKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
F +P + + SR+ I E +K S A+ L + T+ D+R +N L
Sbjct: 533 TFDLRFRRPDANSMRSRIMSIAYREGLKLSPQAVDQLVQGTQSDMRQIINLL 584
>gi|301093002|ref|XP_002997350.1| replication factor C subunit, putative [Phytophthora infestans
T30-4]
gi|262110748|gb|EEY68800.1| replication factor C subunit, putative [Phytophthora infestans
T30-4]
Length = 893
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 148/343 (43%), Gaps = 67/343 (19%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVV-----QMNSV 366
K +LL GPPG+GKTT+A++ A+ CG+ E+NASD RS ++ + DV+ Q +
Sbjct: 389 KTVLLSGPPGIGKTTIANLVARECGFACTELNASDTRSKKMLQTGLKDVLGTQALQFGAA 448
Query: 367 MADSRPK------CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
+ + K +++DE+DG G +G +++++ +KS T
Sbjct: 449 SGEFKEKMHLARRVIIMDEVDGMSGGDRGGTAELIQLL---KKSKT-------------- 491
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
P+ICICND + +RSL + +P+ ++ RL I NE +
Sbjct: 492 -------------PIICICNDRQSQKVRSLANHSFDLRMRRPTKVQIGKRLMEIGLNEGL 538
Query: 481 KTSSIALTTLAEYTECDIRSCLNTLQ---FLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
A+ A+ DIR L +Q K ++++ SQ + + + F
Sbjct: 539 HMEKNAVEEAADRCGNDIRQLLTQMQRWRLTTTKITYADMVNPSSQHNKDESLRLNPFSA 598
Query: 538 WKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQ-----LQ 592
++IFQ+ S + NE F+ DYD++ + EN +Q +
Sbjct: 599 TQQIFQRE----------LSFDARNEAYFV--------DYDLMPLMVQENYIQSIMNNRR 640
Query: 593 YHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAI 635
D + + + + SDL++ Y+ Q+ L Q + +
Sbjct: 641 SSDENLEAAMHASEFISESDLLNTYVRVEQRWDLLTKQAAMNV 683
>gi|294495084|ref|YP_003541577.1| replication factor C large subunit [Methanohalophilus mahii DSM
5219]
gi|292666083|gb|ADE35932.1| replication factor C large subunit [Methanohalophilus mahii DSM
5219]
Length = 489
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 110/241 (45%), Gaps = 36/241 (14%)
Query: 307 GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV 366
G PE+K +L GP G+GKT+ AH G+ ++E+NASD R++ IE K+ S
Sbjct: 39 GVPEKKAAILSGPAGVGKTSAAHALGNEMGWEIIEMNASDQRTAGIIE-KVAGSASRMST 97
Query: 367 MADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGC 426
+ + + +++DE D G SA+R A NV K+
Sbjct: 98 LTGIQKRLIILDEADNMHG-------------SADRGGTRAITNVIKKSN---------- 134
Query: 427 KKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSR-VVSRLKHICNNESMKTSSI 485
+P+I I NDLY AL S + V++ P R ++ LK IC E + +
Sbjct: 135 ------QPIILIANDLY--ALSSTLRSHCVNIKFNPIPQRSILPALKKICKMEGIMCGTG 186
Query: 486 ALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKR 545
L +AE T D+RS + LQ K+ + V D+ +D S F + ++F+ R
Sbjct: 187 VLEKIAENTGGDLRSAIKDLQATATDKKEIEVADV---TTAERDTKESIFKVLTKVFKGR 243
Query: 546 K 546
+
Sbjct: 244 E 244
>gi|378726930|gb|EHY53389.1| replication factor C subunit 1 [Exophiala dermatitidis NIH/UT8656]
Length = 1098
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 121/578 (20%), Positives = 209/578 (36%), Gaps = 154/578 (26%)
Query: 189 PEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSAL 248
P+KP ++LWVDKYAP+S + + N+ + L++W L
Sbjct: 479 PQKPKSDDRLWVDKYAPDSISSVCG----NKSAVEGLQRW-------------------L 515
Query: 249 RRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGP 308
R W N +N + + KGI
Sbjct: 516 RN-----------------------WPNSA---KSNFKRAGPDGKGIF------------ 537
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA 368
+ LL GPPG+GKTT AH+ AK GY +VE NASD R+ +E ++ V+ S++
Sbjct: 538 ---RAALLHGPPGVGKTTAAHLVAKLEGYDIVESNASDTRNKKLLEQSLVGVLDTTSLLG 594
Query: 369 -----------DSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
R L++DE+DG +G V + + +K+N
Sbjct: 595 YFAGDGKKVDPSKRKLVLIMDEVDGMSAGDRGGVGA---LAAVAKKTNI----------- 640
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
P+I ICN+ P +R Q+ F +P+ + R+ I
Sbjct: 641 ----------------PMILICNERNLPKMRPFYQVTAEFQFRRPTTDMIRGRVATILFR 684
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
E M+ + L E DIR +N + + + L+ D ++ + +
Sbjct: 685 EGMRLPPPIMNALIEGCNGDIRQIINMISTIKLDNKELDFND--TKALSKAWEKHVILKP 742
Query: 538 WKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQ----- 592
W + + + + S ++ N E F D++ + + EN L+ Q
Sbjct: 743 WDIVGKILRPQMFAASSKATLNDKTELYF--------NDHEFSYLMLQENYLKTQPSLAS 794
Query: 593 -YHDPVMLKTVKCLDCLGNS-------DLMHQYIMRTQQ----MP---LYVYQPPLAITV 637
YH + VK L+ N+ DL+ + I +QQ MP ++ + P +
Sbjct: 795 SYHG--KERDVKLLELFDNAASSISDGDLVDRMIHGSQQQWSLMPVHAIFSFVRPASYVY 852
Query: 638 HRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPL 697
+Q+ S Q + F++++ H ++ RH + +
Sbjct: 853 GNFTAQVGFAGWLGQNSKQGKLSRFLKEI----QGHMRLRANADRHEVRQQYL------- 901
Query: 698 LHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLT 735
P L + L + K + ++ M SY LT
Sbjct: 902 ------PALWDKTIGTLQGEGKEAVQDVIDFMDSYYLT 933
>gi|258562918|ref|XP_002582209.1| predicted protein [Uncinocarpus reesii 1704]
gi|237903712|gb|EEP78113.1| predicted protein [Uncinocarpus reesii 1704]
Length = 328
Score = 98.6 bits (244), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 82/169 (48%), Gaps = 56/169 (33%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LW +KY F +L+ D++T+R VL WLK WD VF S ++++
Sbjct: 215 LWTEKYRARRFKDLIGDDRTHRAVLRWLKGWDPIVFPS------------------LAKS 256
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
K QN ++ +LE N++ +K+LLL
Sbjct: 257 KAQNKTA-------------------DLEEPNTH-------------------RKILLLT 278
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV 366
GPPGLGKTTLAHV AK GY V+E+NASD+RS ++ +I D V +V
Sbjct: 279 GPPGLGKTTLAHVCAKQAGYEVLEINASDERSRDVVKGRIKDAVGTENV 327
>gi|358399726|gb|EHK49063.1| hypothetical protein TRIATDRAFT_289887 [Trichoderma atroviride IMI
206040]
Length = 1033
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 97/206 (47%), Gaps = 41/206 (19%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-- 368
++ +++ GPPG+GKTT AH+AAK GY V+E NASD RS +E + DV+ S++
Sbjct: 498 ERAIIISGPPGIGKTTAAHLAAKLEGYDVLESNASDTRSKKLVETGVSDVMNNTSLLGFF 557
Query: 369 -------DSRPK--CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEK 419
D+ K L++DE+DG +G V + K
Sbjct: 558 AGDGKSVDNAKKKIVLIMDEVDGMSAGDRGGVGALAKF---------------------- 595
Query: 420 ISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNES 479
C+K + P+I ICN+ P ++ A F +P+V +V SR+ IC+ E
Sbjct: 596 ------CRKTEV--PLILICNERRLPKMKPFDHAAFDIRFNRPTVDQVRSRIMTICHREG 647
Query: 480 MKTSSIALTTLAEYTECDIRSCLNTL 505
+K + L E + DIR +N +
Sbjct: 648 LKLPPPVVDALIEGSNKDIRQIINMI 673
>gi|340711861|ref|XP_003394486.1| PREDICTED: LOW QUALITY PROTEIN: replication factor C subunit 1-like
[Bombus terrestris]
Length = 1007
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/424 (23%), Positives = 181/424 (42%), Gaps = 89/424 (20%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM---- 367
K LL GPPG+GKTT V G+ ++E NASD RS ++ ++ +++ ++
Sbjct: 501 KAALLSGPPGIGKTTTVQVVCNELGFDLIEFNASDTRSKKLLQEEVSELLSNTTIKNYFK 560
Query: 368 -ADSRPK---CLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISK 422
S+P L++DE+DG G + +G ++ ++ ++
Sbjct: 561 DVKSKPSSKHVLLMDEVDGMAGNEDRGGLQELINLIK----------------------- 597
Query: 423 KKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKT 482
S P++CICND P +R+L F +P + ++ +K +C E+++
Sbjct: 598 -------STDIPIVCICNDRNNPKMRTLSNYTFDLRFPKPRLEQIRGAMKSMCFKENIQI 650
Query: 483 SSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVG-----RKDMSRSAFDI 537
S+ L L E T DIR +N L V GSQ KD+ +D+
Sbjct: 651 SNEDLDRLIESTNQDIRQVINHLALF--------VGQTGSQEKMXKKHINKDLRLGPWDV 702
Query: 538 WKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDP- 596
K++F + K + S+S S++ F H DY++ + EN L + P
Sbjct: 703 VKKVFSIEEHKHM--SISDKSSL-----FFH-------DYNIAPLFVQENYLMVIPQVPK 748
Query: 597 --VMLKTVKCLDCLGNSDLMHQYIMRTQQ---MPLYVYQ----PPLAITVHRLVSQIQKP 647
++ + + + + D++ + I +P+ Y P A++ H + QI P
Sbjct: 749 NELLGRVAESAESIALGDVVEKSIRSNNAWSLLPIQAYYSSVIPGTAMSGH-IGGQINFP 807
Query: 648 NLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLR 707
S N M+++ + H+++ S+ E++ D I PL + + LR
Sbjct: 808 AWLGRNSKTGKLNRLMQEI----TLHTRLATGASK----EAINLDYIKPLRNTI----LR 855
Query: 708 PVAL 711
P+A+
Sbjct: 856 PLAV 859
>gi|239610551|gb|EEQ87538.1| chromosome transmission fidelity factor [Ajellomyces dermatitidis
ER-3]
Length = 1068
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 152/395 (38%), Gaps = 109/395 (27%)
Query: 144 KKLDVRAHSNSLTSEPIDVLLQKVEQEAFNKA---LNSSSEGQSDRSLPEKPVVHEQLWV 200
K + A L + I + ++++E +A + S+S+ + S P V +LW
Sbjct: 416 KAAEQHAAKKKLEEQRIKDMAAEIDREEKKRAAASMASTSKTTNGASKPAPAAVDSRLWT 475
Query: 201 DKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQ 260
+YAP S + + ++ ++ WL+
Sbjct: 476 SRYAPTSLSMICGNKGAVEKLQSWLR---------------------------------- 501
Query: 261 NDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPP 320
N+RNS +++ KG +D G + +++ GPP
Sbjct: 502 -----------------NWRNSAMADFK----KGGKD---------GTGLYRAVMIHGPP 531
Query: 321 GLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNS-----------VMAD 369
G+GKTT AH+ AK Y VVE NASD RS S +E + V+ S V +
Sbjct: 532 GIGKTTAAHLVAKLENYDVVESNASDTRSKSLVETGLQGVLDTTSLQGYFSGEGKRVESG 591
Query: 370 SRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKA 429
+ L++DE+DG +G V + + KK
Sbjct: 592 KKNLVLIMDEVDGMSAGDRGGVGALAAV----------------------------AKKT 623
Query: 430 SLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTT 489
+ P+I ICN+ P +R + F +P+V ++ +RL IC E +K + L
Sbjct: 624 RI--PMILICNERRLPKMRPFDSVTFDLQFRRPTVEQIRARLSTICYREGLKITPQVLDN 681
Query: 490 LAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV 524
L + T DIR +N L ++ L+ D G Q+
Sbjct: 682 LIQGTHADIRQVINMLSTAKLDQQALD-YDQGKQM 715
>gi|451996322|gb|EMD88789.1| hypothetical protein COCHEDRAFT_1196708 [Cochliobolus
heterostrophus C5]
Length = 1070
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 98/216 (45%), Gaps = 41/216 (18%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNS------ 365
+ +++ GPPG+GKTT AH+ AK GY +VE NASD RS IE+ + V+ NS
Sbjct: 527 RAVMIHGPPGIGKTTAAHLVAKLEGYDIVERNASDTRSKKLIEDGLRGVLSTNSLHGYFA 586
Query: 366 -----VMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
V + L++DE+DG +G V + +
Sbjct: 587 GDGKKVEGSKKKLVLIMDEVDGMSAGDRGGVGALAAV----------------------- 623
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
CKK + P+I ICND P ++ + F +P+V +V SR+ I E +
Sbjct: 624 -----CKKTEV--PMILICNDRRQPKMKPFDYVTFDLPFRRPTVDQVRSRIMTIAFREGL 676
Query: 481 KTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILN 516
K S+ + L E + DIR +N + +E+++
Sbjct: 677 KMSTPVINALIEGSHSDIRQVVNMISTAKIDQEVMD 712
>gi|440804114|gb|ELR24992.1| replication factor rfc1 c terminal domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 977
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 103/232 (44%), Gaps = 39/232 (16%)
Query: 295 IQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTI- 353
+Q + + + G ++ LL GPPG+GKTT AH+ A CGY+ +E NASD RS I
Sbjct: 435 VQRAKRGEAPARGATQKNAALLSGPPGIGKTTTAHLVAAECGYYALEFNASDTRSKKMIK 494
Query: 354 -------ENKILDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNT 406
EN+ L D + L++DE+DG +G + I+ ++
Sbjct: 495 EHLAQSTENRGLAEFFTGRGGEDGK-TVLIMDEVDGMSSGDRGGMAEIIALI-------- 545
Query: 407 AKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSR 466
KK + P+IC+CND + +RSL +P+ +
Sbjct: 546 --------------------KKTHI--PIICLCNDRASAKVRSLANYCLDIQLQKPTTQQ 583
Query: 467 VVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVM 518
++ R+ I E++ + LT + + + D+R LN LQ L K + L +
Sbjct: 584 ILGRVTQILQRENIAIDNATLTRIVDASNGDVRQLLNMLQMLTVKSKDLGTL 635
>gi|238496567|ref|XP_002379519.1| DNA replication factor C subunit Rfc1, putative [Aspergillus flavus
NRRL3357]
gi|220694399|gb|EED50743.1| DNA replication factor C subunit Rfc1, putative [Aspergillus flavus
NRRL3357]
Length = 852
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 96/225 (42%), Gaps = 48/225 (21%)
Query: 299 WHKKTRST-------GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSS 351
WHK + G + +++ GPPG+GKTT AH+ AK GY +VE NASD RS
Sbjct: 295 WHKNAKGNFSKPGKDGTGIYRAVMIHGPPGIGKTTAAHLVAKLEGYDIVETNASDTRSKK 354
Query: 352 TIENKILDVVQMNSVMA-----------DSRPKCLVIDEIDGALGDGKGAVEVILKMVSA 400
+E +L V+ S+ + + L++DE+DG +G V + +
Sbjct: 355 LVETGLLGVLDTTSLQGYFAADGQKVHREKKNMVLIMDEVDGMSAGDRGGVGALAAI--- 411
Query: 401 ERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFI 460
KK + P+I ICN+ P ++ + F
Sbjct: 412 -------------------------AKKTHI--PLILICNERRLPKMKPFDHVTYELPFR 444
Query: 461 QPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
+P+ ++ +RL IC E +K L +L E T DIR +N L
Sbjct: 445 RPTAEQIRARLSTICFREGLKIPPPVLDSLIEGTHADIRQIINML 489
>gi|145483719|ref|XP_001427882.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124394965|emb|CAK60484.1| unnamed protein product [Paramecium tetraurelia]
Length = 929
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 94/203 (46%), Gaps = 38/203 (18%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV----- 366
K LLL GPPG+GKTT+ + AK Y ++E NASD RS IEN + +Q N+V
Sbjct: 432 KALLLSGPPGIGKTTIIRLIAKQKSYQLIEWNASDVRSKLQIENYVKH-LQDNTVLRFKD 490
Query: 367 --MADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKK 424
+ +++DE+DG G +G + ++ M+ +
Sbjct: 491 ANLISEGKTIILMDEVDGMTGSDRGGNKCLIDMIRLTK---------------------- 528
Query: 425 GCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSS 484
P++CICND ++RSL F +P+ + +L++IC +E++
Sbjct: 529 --------VPIVCICNDRNKQSMRSLANYCLDLQFKKPNQVEIFKKLEYICKSENISYDP 580
Query: 485 IALTTLAEYTECDIRSCLNTLQF 507
L E ++CDIR LN LQ
Sbjct: 581 AELKQQIEVSQCDIRQLLNLLQM 603
>gi|384245951|gb|EIE19443.1| RFC1-domain-containing protein, partial [Coccomyxa subellipsoidea
C-169]
Length = 480
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 118/247 (47%), Gaps = 48/247 (19%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRS----------SSTIENKILDV 360
+K ++L GPPG+GKT+ A + A+ G+ VEVNASD R+ + + N I ++
Sbjct: 50 KKAIILSGPPGIGKTSSALIIARELGFIPVEVNASDTRNKADKSAKGGMAGKLANNIKEL 109
Query: 361 VQMNSVMADSRPK----CLVIDEIDG-ALGDGKGAVEVILKMVSAERKSNTAKENVAKED 415
++ + ++ + CL++DE+DG + GD G ++IL + +A+
Sbjct: 110 ANNRALTSGAQGEEKKLCLIMDEVDGMSAGDRGGVPDLILTIKAAKL------------- 156
Query: 416 QPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHIC 475
P+ICICND Y L+SLR F +P+ ++ RL IC
Sbjct: 157 ------------------PIICICNDKYNQKLKSLRNHCLELDFRKPTSQQISKRLIQIC 198
Query: 476 NNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAF 535
E ++ + L L E + DIR L LQ + +K L+ + +++ G KD S F
Sbjct: 199 QKEGLQVNESTLAALVESSNADIRLMLGQLQMIRLRKRSLSYDE--AKMGGGKDADMSPF 256
Query: 536 DIWKEIF 542
+ +++
Sbjct: 257 EAGRKLL 263
>gi|406607392|emb|CCH41183.1| Replication factor C subunit 1 [Wickerhamomyces ciferrii]
Length = 905
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 108/245 (44%), Gaps = 46/245 (18%)
Query: 307 GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV 366
G E + +L+ GPPG+GKTT AH+ AK GY V+E NASD RS + + + +++ SV
Sbjct: 429 GESELRAVLIHGPPGIGKTTAAHLVAKSLGYDVLEKNASDVRSKGLLNSGVGNILNNTSV 488
Query: 367 MADSRPK-----------CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKED 415
M P+ CL++DE+DG G +G V +
Sbjct: 489 MGYFNPEAHATAENGAKFCLIMDEVDGMSGGDRGGVGQLASY------------------ 530
Query: 416 QPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHIC 475
C+ + P+I ICND P +R ++ F +PS + SRL I
Sbjct: 531 ----------CRTTQV--PMILICNDKSLPKMRPFDRVTIDLPFRRPSAREMKSRLMTIA 578
Query: 476 NNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEIL---NVMDIGSQVVGRKDMSR 532
E +K + L + T DIR +N L + ++ + N DI +K+++
Sbjct: 579 LREKIKLDPNIIDQLVQATSNDIRQIINLLSTVSSTQKTINSENSKDISE--AWKKNIAL 636
Query: 533 SAFDI 537
FDI
Sbjct: 637 KPFDI 641
>gi|255713750|ref|XP_002553157.1| KLTH0D10296p [Lachancea thermotolerans]
gi|238934537|emb|CAR22719.1| KLTH0D10296p [Lachancea thermotolerans CBS 6340]
Length = 864
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 153/369 (41%), Gaps = 65/369 (17%)
Query: 277 GNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCG 336
GN + N L+ SN + Q K G + ++ GPPG+GKTT AH+AAK G
Sbjct: 316 GNKTSVNKLKTWLSNWRTYQKQGFKNAGRDGFGVFRAAMVYGPPGIGKTTAAHLAAKELG 375
Query: 337 YHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPK----------CLVIDEIDGALGD 386
Y ++E NASD RS S + + + + SV+ + K +++DE+DG G
Sbjct: 376 YDILERNASDVRSKSLLNAGVKNALDNTSVVGFFKSKHDGDVNQKNFVIIMDEVDGMSGG 435
Query: 387 GKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPA 446
+G V + + C+K+S+ P+I ICN+ +P
Sbjct: 436 DRGGVGQMAQF----------------------------CRKSSM--PMILICNERNSPK 465
Query: 447 LRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLN--- 503
+R ++ F +P + + +RL + E + + L E T DIR +N
Sbjct: 466 MRPFDRVCLDIQFRRPDPTSIKARLMTVAVREKFQLDPNIIDKLVEATRGDIRQLINLLS 525
Query: 504 TLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNE 563
T+ KK N +I K+++ FDI ++F R+ + V S S
Sbjct: 526 TISTTTKKIGHENAQEIAK--AWEKNIALKPFDIAHKLFD----GRIYSDVGSKS----- 574
Query: 564 FDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLK--------TVKCLDCLGNSDLMH 615
F + D+D I EN LQ + P +LK + + DL+
Sbjct: 575 FPLYKKIELYFDDFDFAPLMIQENYLQTR---PSVLKPGQSHLAAVADAAESISQGDLVE 631
Query: 616 QYIMRTQQM 624
+ I ++Q+
Sbjct: 632 RKIRSSEQL 640
>gi|451851018|gb|EMD64319.1| hypothetical protein COCSADRAFT_26479 [Cochliobolus sativus ND90Pr]
Length = 1089
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 41/216 (18%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV----- 366
+ +++ GPPG+GKTT AH+ AK GY +VE NASD RS IE+ + V+ NS+
Sbjct: 545 RAVMIHGPPGIGKTTAAHLVAKLEGYDIVERNASDTRSKKLIEDGLRGVLSTNSLHGYFA 604
Query: 367 -----MADSRPK-CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
+ DS+ K L++DE+DG +G V + +
Sbjct: 605 GDGKKVEDSKKKLVLIMDEVDGMSAGDRGGVGALAAV----------------------- 641
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
CKK + P+I ICND P ++ + F +P++ +V SR+ I E +
Sbjct: 642 -----CKKTEV--PMILICNDRRQPKMKPFDYVTFDLPFRRPTIDQVRSRIMTIAFREGL 694
Query: 481 KTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILN 516
K + + L E + DIR +N + +E+++
Sbjct: 695 KMPTPVINALIEGSHSDIRQVVNMISTAKIDQEVMD 730
>gi|145552994|ref|XP_001462172.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124430010|emb|CAK94799.1| unnamed protein product [Paramecium tetraurelia]
Length = 972
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 33/205 (16%)
Query: 306 TGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNS 365
G K ++ GPPG+GKT++ + A+ G ++ NASD R+ ++ + + D+V +
Sbjct: 456 VGNITSKACIISGPPGIGKTSMVRLVAEALGLKLIVNNASDKRNKGSLRSVLNDLVDNSV 515
Query: 366 VMADSRPK---CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISK 422
+M RP +V+DE+DG G +G + +++ + + R
Sbjct: 516 LMNLFRPNKDFIIVMDEVDGMTGSDRGGISALIECIKSTR-------------------- 555
Query: 423 KKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKT 482
P++CICND+ L+SL F +P V RLK+IC E++
Sbjct: 556 ----------VPIVCICNDIDNQKLKSLLAHCYSIKFQKPDAKSVAKRLKYICEQENINM 605
Query: 483 SSIALTTLAEYTECDIRSCLNTLQF 507
+ L LA +CDIR +N L+
Sbjct: 606 NLEDLEKLAICFDCDIRQSINMLEL 630
>gi|167390687|ref|XP_001739454.1| replication factor C large subunit [Entamoeba dispar SAW760]
gi|165896833|gb|EDR24155.1| replication factor C large subunit, putative [Entamoeba dispar
SAW760]
Length = 576
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 118/244 (48%), Gaps = 42/244 (17%)
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA 368
P+++ +LL G PG+GKTT++ + K G++ +E NASD R+ S+IE I + +
Sbjct: 309 PDRRAVLLAGAPGVGKTTVSKIVGKTLGFNPIEFNASDTRNKSSIELAIKRIFLNGQISI 368
Query: 369 DS---RPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKG 425
D + +++DE+DG +G + ++K + KE +
Sbjct: 369 DGSKNKKPLIIMDEVDGMSSGDRGGITELVKYI--------------KETE--------- 405
Query: 426 CKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSI 485
+P++CICND+ ++ L + + F + SV + RLK+IC+ E ++ S
Sbjct: 406 -------QPIVCICNDVMDKKMQPLINVCETINFSKISVLELTERLKYICDKEGVQVSDE 458
Query: 486 ALTTLAEYTECDIRSCLNTLQ-------FLDKKKEILNVMDIGSQVVGRKDMSRSAFDIW 538
L+ +A D+R +N LQ L +K E ++ +++ ++ R S ++F
Sbjct: 459 NLSQIASKAHGDVRYGINMLQSFVKCGVTLGEKNEDIDYVEVVPTLITR--YSSTSFTEK 516
Query: 539 KEIF 542
EIF
Sbjct: 517 NEIF 520
>gi|327349015|gb|EGE77872.1| chromosome transmission fidelity factor [Ajellomyces dermatitidis
ATCC 18188]
Length = 1065
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 152/395 (38%), Gaps = 109/395 (27%)
Query: 144 KKLDVRAHSNSLTSEPIDVLLQKVEQEAFNKA---LNSSSEGQSDRSLPEKPVVHEQLWV 200
K + A L + I + ++++E +A + S+S+ + S P V +LW
Sbjct: 413 KAAEQHAAKKKLEEQRIKDMAAEIDREEKKRAAASMASTSKTTNGASKPAPAAVDSRLWT 472
Query: 201 DKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQ 260
+YAP S + + ++ ++ WL+
Sbjct: 473 SRYAPTSLSMICGNKGAVEKLQSWLR---------------------------------- 498
Query: 261 NDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPP 320
N+RNS +++ KG +D G + +++ GPP
Sbjct: 499 -----------------NWRNSAMADFK----KGGKD---------GTGLYRAVMIHGPP 528
Query: 321 GLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNS-----------VMAD 369
G+GKTT AH+ AK Y VVE NASD RS S +E + V+ S V +
Sbjct: 529 GIGKTTAAHLVAKLENYDVVESNASDTRSKSLVETGLQGVLDTTSLQGYFSGEGKRVESG 588
Query: 370 SRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKA 429
+ L++DE+DG +G V + + KK
Sbjct: 589 KKNLVLIMDEVDGMSAGDRGGVGALAAV----------------------------AKKT 620
Query: 430 SLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTT 489
+ P+I ICN+ P +R + F +P+V ++ +RL IC E +K + L
Sbjct: 621 RI--PMILICNERRLPKMRPFDSVTFDLQFRRPTVEQIRARLSTICYREGLKITPQVLDN 678
Query: 490 LAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV 524
L + T DIR +N L ++ L+ D G Q+
Sbjct: 679 LIQGTHADIRQVINMLSTAKLDQQALD-YDQGKQM 712
>gi|261195366|ref|XP_002624087.1| chromosome transmission fidelity factor [Ajellomyces dermatitidis
SLH14081]
gi|239587959|gb|EEQ70602.1| chromosome transmission fidelity factor [Ajellomyces dermatitidis
SLH14081]
Length = 1065
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 152/395 (38%), Gaps = 109/395 (27%)
Query: 144 KKLDVRAHSNSLTSEPIDVLLQKVEQEAFNKA---LNSSSEGQSDRSLPEKPVVHEQLWV 200
K + A L + I + ++++E +A + S+S+ + S P V +LW
Sbjct: 413 KAAEQHAAKKKLEEQRIKDMAAEIDREEKKRAAASMASTSKTTNGASKPAPAAVDSRLWT 472
Query: 201 DKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQ 260
+YAP S + + ++ ++ WL+
Sbjct: 473 SRYAPTSLSMICGNKGAVEKLQSWLR---------------------------------- 498
Query: 261 NDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPP 320
N+RNS +++ KG +D G + +++ GPP
Sbjct: 499 -----------------NWRNSAMADFK----KGGKD---------GTGLYRAVMIHGPP 528
Query: 321 GLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNS-----------VMAD 369
G+GKTT AH+ AK Y VVE NASD RS S +E + V+ S V +
Sbjct: 529 GIGKTTAAHLVAKLENYDVVESNASDTRSKSLVETGLQGVLDTTSLQGYFSGEGKRVESG 588
Query: 370 SRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKA 429
+ L++DE+DG +G V + + KK
Sbjct: 589 KKNLVLIMDEVDGMSAGDRGGVGALAAV----------------------------AKKT 620
Query: 430 SLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTT 489
+ P+I ICN+ P +R + F +P+V ++ +RL IC E +K + L
Sbjct: 621 RI--PMILICNERRLPKMRPFDSVTFDLQFRRPTVEQIRARLSTICYREGLKITPQVLDN 678
Query: 490 LAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV 524
L + T DIR +N L ++ L+ D G Q+
Sbjct: 679 LIQGTHADIRQVINMLSTAKLDQQALD-YDQGKQM 712
>gi|296422835|ref|XP_002840964.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637191|emb|CAZ85155.1| unnamed protein product [Tuber melanosporum]
Length = 1025
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 92/205 (44%), Gaps = 41/205 (20%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA--- 368
+ +++ GPPG+GKTT AH+ AK GY +VE NASD RS +E K+ V+ S++
Sbjct: 491 RAVMIHGPPGIGKTTAAHLVAKLEGYDIVESNASDTRSKKLMEEKLRGVLDNRSLLGYFA 550
Query: 369 --------DSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
+ L++DE+DG +G V + +
Sbjct: 551 GDKEKVKHSKQKMVLIMDEVDGMSAGDRGGVGQLAAV----------------------- 587
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
CKK+++ P+ICICN+ P +R + F +P + V SR+ I E +
Sbjct: 588 -----CKKSNI--PIICICNERKLPKMRPFDMVTYDLPFRRPDAAAVRSRIMSIAYREGI 640
Query: 481 KTSSIALTTLAEYTECDIRSCLNTL 505
K + L E T DIR +N L
Sbjct: 641 KLPPNVIDQLVEGTHADIRQIINML 665
>gi|301111033|ref|XP_002904596.1| replication factor C subunit 1 [Phytophthora infestans T30-4]
gi|262095913|gb|EEY53965.1| replication factor C subunit 1 [Phytophthora infestans T30-4]
Length = 770
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 148/343 (43%), Gaps = 67/343 (19%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVV-----QMNSV 366
K +LL GPPG+GKTT+A++ A+ CG+ E+NASD RS ++ + DV+ Q +
Sbjct: 266 KTVLLSGPPGIGKTTIANLVARECGFACTELNASDTRSKKMLQTGLKDVLGTQALQFGAA 325
Query: 367 MADSRPK------CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
+ + K +++DE+DG G +G +++++ +KS T
Sbjct: 326 SGEFKEKMHLARRVIIMDEVDGMSGGDRGGTAELIQLL---KKSKT-------------- 368
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
P+ICICND + +RSL + +P+ ++ RL I NE +
Sbjct: 369 -------------PIICICNDRQSQKVRSLANHSFDLRMRRPTKVQIGKRLMEIGLNEGL 415
Query: 481 KTSSIALTTLAEYTECDIRSCLNTLQ---FLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
A+ A+ DIR L +Q K ++++ SQ + + + F
Sbjct: 416 HMEKNAIEEAADRCGNDIRQLLTQMQRWRLTTTKITYADMVNPSSQHNKDESLRLNPFSA 475
Query: 538 WKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQ-----LQ 592
++IFQ+ S + NE F+ DYD++ + EN +Q +
Sbjct: 476 TQQIFQR----------ELSFDARNEAYFV--------DYDLMPLMVQENYIQSIMNNRR 517
Query: 593 YHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAI 635
D + + + + SDL++ Y+ Q+ L Q + +
Sbjct: 518 SSDENLEAAMHASEFISESDLLNTYVRVEQRWDLLTKQAAMNV 560
>gi|226286728|gb|EEH42241.1| replication factor C subunit 1 [Paracoccidioides brasiliensis Pb18]
Length = 1066
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 127/328 (38%), Gaps = 105/328 (32%)
Query: 189 PEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSAL 248
PE + ++LW KYAP S + ++ ++ WL+
Sbjct: 459 PEPAAIDDRLWTSKYAPTSLNMICGNKTAVEKLQSWLR---------------------- 496
Query: 249 RRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGP 308
N+RNS +++ KG +D G
Sbjct: 497 -----------------------------NWRNSAKADFK----KGGKD---------GT 514
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA 368
+ +++ GPPG+GKTT AH+ AK Y VVE NASD RS +E + V+ S+
Sbjct: 515 GIYRAVMIHGPPGIGKTTAAHLVAKLENYDVVETNASDTRSKGLLETGLRGVLDTTSLQG 574
Query: 369 ---------DSRPK--CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
DS K L++DE+DG M + +R A +VAK+ +
Sbjct: 575 YFSGEGKKVDSGKKNLVLIMDEVDG--------------MSAGDRGGVGALASVAKKTRI 620
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
P+I ICN+ P +R + F +P+V ++ +RL IC
Sbjct: 621 ----------------PMILICNERRLPKMRPFDSVTFDLPFRRPTVDQIRARLSTICYR 664
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTL 505
E ++ L +L + T DIR +N L
Sbjct: 665 EGLRIPPQVLDSLIQGTHADIRQVINML 692
>gi|429857953|gb|ELA32790.1| chromosome transmission fidelity factor [Colletotrichum
gloeosporioides Nara gc5]
Length = 1038
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 123/320 (38%), Gaps = 105/320 (32%)
Query: 197 QLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQ 256
QLW KYAP+ + ++ ++ WL+
Sbjct: 452 QLWTSKYAPSQLNHICGNKSQVEKIQAWLR------------------------------ 481
Query: 257 NKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLL 316
N++ S +++ + G+ + + +++
Sbjct: 482 ---------------------NWQKSRKYDFQKRGADGMGGT-------------RAIII 507
Query: 317 CGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-------- 368
GPPG+GKTT AH+AAK G+ V+E NASD RS +EN + +++ S++
Sbjct: 508 SGPPGIGKTTAAHLAAKLEGFDVIESNASDTRSKKLVENGVSEIMNNTSLLGYFAGDGKK 567
Query: 369 -DSRPK--CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKG 425
D K L++DE+DG +G V + K
Sbjct: 568 VDGVKKNIVLIMDEVDGMSAGDRGGVGALAKF---------------------------- 599
Query: 426 CKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSI 485
CKK + P+I ICN+ P ++ + F +P+V +V SR+ IC+ E +K
Sbjct: 600 CKKTEV--PLILICNERKLPKMKPFDFVTTDVPFRRPTVEQVRSRIMTICHREGLKLPVP 657
Query: 486 ALTTLAEYTECDIRSCLNTL 505
+ L E + DIR +N +
Sbjct: 658 VVDALIEGSNKDIRQIINMI 677
>gi|348529444|ref|XP_003452223.1| PREDICTED: replication factor C subunit 1-like [Oreochromis
niloticus]
Length = 1174
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 102/431 (23%), Positives = 173/431 (40%), Gaps = 93/431 (21%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV----- 366
K LL GPPG+GKTT A + + G+ VE+NAS RS ++++ + + + S+
Sbjct: 671 KAALLSGPPGVGKTTTAALVCEELGFSYVEMNASCTRSKNSLKEVVAESLNNTSIENFYK 730
Query: 367 ---MADSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISK 422
S L++DE+DG G + +G ++ ++ ++ + KI
Sbjct: 731 GTSQTVSSKHVLIMDEVDGMAGNEDRGGIQEMIGLI-----------------KNSKI-- 771
Query: 423 KKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKT 482
P+IC+CND +RSL F +P V ++ + I E ++
Sbjct: 772 -----------PIICMCNDRNHQKIRSLANYCFDLRFQRPRVEQIKGAMMSIAFKEGIRI 820
Query: 483 SSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVV-GRKDMSRSAFDIWKEI 541
AL + + D+R ++ L K +++ S RKDM FD+ +++
Sbjct: 821 PPPALNEIILASNQDVRQVIHNLSMWSAKDKVMTYDQCKSDAASARKDMKLGPFDVCRKV 880
Query: 542 FQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQ---------LQ 592
F + + R S+ S++ F H DY + + EN L L+
Sbjct: 881 FASGE-ETARMSLIDKSDL-----FFH-------DYSLAPLFVQENYLHVRPAAAGGNLK 927
Query: 593 YHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWP 652
H ++ KT D + + DL+ + I Q L P AI L ++ +
Sbjct: 928 SHLVLLSKTA---DSICDGDLVDRRIRSRQNWSLL---PTQAIYASVLPGELMR------ 975
Query: 653 KSYQRYRNAFMEKMDIFKSW---------HSKIPPYISRHLSTESLVEDSISPL--LHIL 701
+M + IF SW HS+I +S H+S ++L L LH L
Sbjct: 976 --------GYMNQFPIFPSWLGKNSSTNKHSRIMQELSSHMSLKTLSSKQAVNLDYLHYL 1027
Query: 702 SPPTLRPVALH 712
L P+ H
Sbjct: 1028 RQAILNPLQKH 1038
>gi|225684712|gb|EEH22996.1| replication factor C subunit 1 [Paracoccidioides brasiliensis Pb03]
Length = 1066
Score = 97.4 bits (241), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 127/328 (38%), Gaps = 105/328 (32%)
Query: 189 PEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSAL 248
PE + ++LW KYAP S + ++ ++ WL+
Sbjct: 459 PEPAAIDDRLWTSKYAPTSLNMICGNKTAVEKLQSWLR---------------------- 496
Query: 249 RRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGP 308
N+RNS +++ KG +D G
Sbjct: 497 -----------------------------NWRNSAKADFK----KGGKD---------GT 514
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA 368
+ +++ GPPG+GKTT AH+ AK Y VVE NASD RS +E + V+ S+
Sbjct: 515 GIYRAVMIHGPPGIGKTTAAHLVAKLENYDVVETNASDTRSKGLLETGLRGVLDTTSLQG 574
Query: 369 ---------DSRPK--CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
DS K L++DE+DG M + +R A +VAK+ +
Sbjct: 575 YFSGEGKKVDSGKKNLVLIMDEVDG--------------MSAGDRGGVGALASVAKKTRI 620
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
P+I ICN+ P +R + F +P+V ++ +RL IC
Sbjct: 621 ----------------PMILICNERRLPKMRPFDSVTFDLPFRRPTVDQIRARLSTICYR 664
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTL 505
E ++ L +L + T DIR +N L
Sbjct: 665 EGLRIPPQVLDSLIQGTHADIRQVINML 692
>gi|295674213|ref|XP_002797652.1| replication factor C subunit 1 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226280302|gb|EEH35868.1| replication factor C subunit 1 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1066
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 127/328 (38%), Gaps = 105/328 (32%)
Query: 189 PEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSAL 248
PE + ++LW KYAP S + ++ ++ WL+
Sbjct: 459 PEPAAIDDRLWTSKYAPTSLNMICGNKTAVEKLQSWLR---------------------- 496
Query: 249 RRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGP 308
N+RNS +++ KG +D G
Sbjct: 497 -----------------------------NWRNSAKADFK----KGGKD---------GT 514
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA 368
+ +++ GPPG+GKTT AH+ AK Y VVE NASD RS +E + V+ S+
Sbjct: 515 GIYRAVMIHGPPGIGKTTAAHLVAKLENYDVVETNASDTRSKGLLETGLRGVLDTTSLQG 574
Query: 369 ---------DSRPK--CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
DS K L++DE+DG M + +R A +VAK+ +
Sbjct: 575 YFSGEGKKVDSGKKNLVLIMDEVDG--------------MSAGDRGGVGALASVAKKTRI 620
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
P+I ICN+ P +R + F +P+V ++ +RL IC
Sbjct: 621 ----------------PMILICNERRLPKMRPFDSVTFDLPFRRPTVDQIRARLSTICYR 664
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTL 505
E ++ L +L + T DIR +N L
Sbjct: 665 EGLRIPPQVLDSLIQGTHADIRQVINML 692
>gi|195396041|ref|XP_002056641.1| GJ11052 [Drosophila virilis]
gi|194143350|gb|EDW59753.1| GJ11052 [Drosophila virilis]
Length = 964
Score = 97.1 bits (240), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 140/373 (37%), Gaps = 108/373 (28%)
Query: 185 DRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREV---LLWLKQWDSCVFGSEIRSTS 241
D + E+ + WVDKY P+S E++ V + WL +W
Sbjct: 391 DAAKTEEDISSNMAWVDKYKPSSIKEIVGSAGPGSNVNKLMNWLSKW------------- 437
Query: 242 EEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWS---NGNFRNSNNLEYENSNSKGIQDS 298
N T+ R N W+ +G+F
Sbjct: 438 -----------------YVNHDGKTKPQRPNPWAKNDDGSFF------------------ 462
Query: 299 WHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRS--------S 350
K LL GPPG+GKTT A + + G+ VE NASD RS S
Sbjct: 463 -------------KAALLSGPPGIGKTTTATLVCQELGFDAVEFNASDTRSKRLLKEEVS 509
Query: 351 STIENKILDVVQMNSVMADSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKE 409
S + NK L A S+ L++DE+DG G + +G ++ ++ ++
Sbjct: 510 SLLGNKSLAGYVHGQSQAVSKKHVLIMDEVDGMAGNEDRGGMQELIALI----------- 558
Query: 410 NVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVS 469
K +S+ P+IC+CND P +RSL F +P ++
Sbjct: 559 -----------------KDSSV--PIICMCNDRNHPKIRSLVNYCYDLRFQRPRAEQIKG 599
Query: 470 RLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKD 529
R+ IC E +K L + T DIR +N + L +++ +Q V KD
Sbjct: 600 RIMSICFKEKLKIPPAKLEEIIAATNNDIRQTINHIALLSAGEQLPQATT--NQQVAAKD 657
Query: 530 MSRSAFDIWKEIF 542
+ +++ +++F
Sbjct: 658 LKLGPWEVVRKVF 670
>gi|302348724|ref|YP_003816362.1| Replication factor C large subunit [Acidilobus saccharovorans
345-15]
gi|302329136|gb|ADL19331.1| Replication factor C large subunit [Acidilobus saccharovorans
345-15]
Length = 484
Score = 97.1 bits (240), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 181/424 (42%), Gaps = 92/424 (21%)
Query: 298 SWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKI 357
+W + PPE++ LL GPPG+GKT+L AA V+E+NASD R + I +
Sbjct: 33 TWLEAWLKGRPPEKRAALLYGPPGVGKTSLVEAAAHDYKLEVLELNASDYRRAEDIRRTV 92
Query: 358 LDVVQMNSVMADSRP-----KCLVIDEIDG--ALGDGKGAVEVILKMVSAERKSNTAKEN 410
V A RP +++DE+DG A GD G E++ + +A+
Sbjct: 93 -------GVAAFRRPLTGRLMIILMDEVDGISAKGDAGGLDELLRIIPNAQ--------- 136
Query: 411 VAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSR 470
P++ ND + LR LR++ + F S VVS
Sbjct: 137 ----------------------NPIVLTANDPWKDQLRPLREVTLMIEFKNLSTGNVVSL 174
Query: 471 LKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDM 530
L++IC+ E ++ AL +A+ D+R+C+N L+ + + + M++ +V +D
Sbjct: 175 LQNICDREHIECDREALRYIADKNAGDVRACVNDLEAVAEGYGKVT-MELARALVRGRDK 233
Query: 531 SRSAFDIWK---EIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHEN 587
S D+W+ ++F + + +V++S DY+ I +++N
Sbjct: 234 S---IDLWRTLNDVFYAKAGWMAKKAVTNSEE----------------DYETIMAWLNDN 274
Query: 588 ILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPL----YVYQ---PPLAITVHRL 640
I Q +Y DP + D L + L ++ R + YV+ P +A +
Sbjct: 275 I-QNKYGDPE--DAFRAWDALSRASL---FLSRAKAGNWDFLSYVFDLMGPGVA-----M 323
Query: 641 VSQIQKPNLEWPKSYQR-YRNAFMEKMDIFKSWHSKIPPYISR--HLSTESLVEDSISPL 697
Q+++ L YQ R M K+ +S I ++ H+ST + ED + P
Sbjct: 324 ARQVEQSPLR--NRYQYPSRITLMAKLKDIRSVRDSIAERLASRLHISTSTFKED-VLPY 380
Query: 698 LHIL 701
L I+
Sbjct: 381 LFII 384
>gi|448512259|ref|XP_003866703.1| Rfc1 protein [Candida orthopsilosis Co 90-125]
gi|380351041|emb|CCG21264.1| Rfc1 protein [Candida orthopsilosis Co 90-125]
Length = 854
Score = 97.1 bits (240), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 111/248 (44%), Gaps = 53/248 (21%)
Query: 308 PPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM 367
P + L+ GPPG+GKTT AH+ A G+ V+E NASD RS S + I V+ SV+
Sbjct: 349 PGSYRAALISGPPGIGKTTAAHMVANSLGFDVLEKNASDVRSKSLLNANIKSVLSNTSVI 408
Query: 368 A------------DSRPKCLVIDEIDG-ALGD--GKGAVEVILKMVSAERKSNTAKENVA 412
+S+ CL++DE+DG + GD G GA+ ++ +
Sbjct: 409 GFFKHRDDEHQSSNSKKLCLIMDEVDGMSSGDHGGAGALSQFCRITNM------------ 456
Query: 413 KEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLK 472
P+I ICND P +R+ ++ F +P+ + V SRL
Sbjct: 457 ---------------------PMILICNDKSLPKMRTFDRVTYDLPFRRPTENEVKSRLM 495
Query: 473 HICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEIL---NVMDIGSQVVGRKD 529
I E +K + L + T DIR +N L + K ++++ NV DI Q +K
Sbjct: 496 TIALREGIKLDPNIIGQLVQATSNDIRQMINLLSTVSKTQKLIGTNNVKDI--QASWKKQ 553
Query: 530 MSRSAFDI 537
+ FDI
Sbjct: 554 IILKPFDI 561
>gi|396463781|ref|XP_003836501.1| similar to chromosome transmission fidelity factor [Leptosphaeria
maculans JN3]
gi|312213054|emb|CBX93136.1| similar to chromosome transmission fidelity factor [Leptosphaeria
maculans JN3]
Length = 1098
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 41/205 (20%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV----- 366
+ ++L GPPG+GKTT AH+ AK GY +VE NASD RS IE+ + V+ NS+
Sbjct: 558 RAIMLHGPPGIGKTTAAHLVAKLEGYDIVERNASDTRSKKLIEDGLRGVLNTNSLHGYFA 617
Query: 367 -----MADSRPK-CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
+ +S+ K L++DE+DG +G V + +
Sbjct: 618 GDGKNVEESKKKLVLIMDEVDGMSAGDRGGVGALAAV----------------------- 654
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
CKK + P+I ICND P ++ + F +P+V +V SR+ I E +
Sbjct: 655 -----CKKTEI--PMILICNDRRLPKMKPFDFVTYDLPFRRPTVDQVRSRIMTIAFREGL 707
Query: 481 KTSSIALTTLAEYTECDIRSCLNTL 505
K + L E + DIR +N +
Sbjct: 708 KIPGPVVNALIEGSHADIRQVVNMI 732
>gi|374633941|ref|ZP_09706306.1| AAA ATPase [Metallosphaera yellowstonensis MK1]
gi|373523729|gb|EHP68649.1| AAA ATPase [Metallosphaera yellowstonensis MK1]
Length = 438
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 130/282 (46%), Gaps = 51/282 (18%)
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA 368
PE K LLL GPPG GKTTLA+ A+ G ++E NASD R+ +++ N I++ M +
Sbjct: 40 PETKGLLLYGPPGTGKTTLAYALARTYGLEIIETNASDSRNMTSLRN-IVERASMAGSLF 98
Query: 369 DSRPKCLVIDEIDGAL-GDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCK 427
+ R K + +DE+DG GA+ IL+++ NT
Sbjct: 99 NERGKLIFLDEVDGIQPRQDFGAISAILEIL-----RNTKY------------------- 134
Query: 428 KASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIAL 487
P++ ND + P LR LR+ K+ + + LK IC E +K A+
Sbjct: 135 ------PILMAANDPWDPNLRDLREAVKMIEVKRLGKVPLRRLLKRICTEERIKCEDGAI 188
Query: 488 TTLAEYTECDIRSCLNTLQFL-DKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRK 546
++ + ++ D R +N L+ + + +E+ D+ ++V+ RK+ + F+ + F +
Sbjct: 189 DSIIDASDGDARYAINFLESIAEGYREVKE--DLVNEVLRRKERELNPFETLRNTFWAKY 246
Query: 547 TKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENI 588
+ R +VS+S + DYD++ ENI
Sbjct: 247 GWQARQAVSNS----------------QIDYDLLMRWFSENI 272
>gi|354546576|emb|CCE43308.1| hypothetical protein CPAR2_209530 [Candida parapsilosis]
Length = 850
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 113/249 (45%), Gaps = 49/249 (19%)
Query: 305 STGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMN 364
S P + L+ GPPG+GKTT AH+ A G+ V+E NASD RS S + I V+
Sbjct: 344 SDNPSSYRAALISGPPGIGKTTAAHLVANSLGFDVLEKNASDVRSKSLLNANIKSVLNNT 403
Query: 365 SVMA------------DSRPKCLVIDEIDG-ALGDGKGAVEVILKMVSAERKSNTAKENV 411
SV+ +SR CL++DE+DG + GD GA +
Sbjct: 404 SVIGFFKHRDDEQQSSNSRKICLIMDEVDGMSSGDHGGAGAL------------------ 445
Query: 412 AKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRL 471
+ C+ ++ P+I ICND P +R+ ++ F +P+ + V SRL
Sbjct: 446 -----------SQFCRITNM--PMILICNDKSLPKMRTFDRVTYDLPFRRPTENEVKSRL 492
Query: 472 KHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEIL---NVMDIGSQVVGRK 528
I E +K + L + T DIR +N L + K ++++ NV +I Q +K
Sbjct: 493 MTIALREGIKLDPNIIGQLVQATSNDIRQMINLLSTVSKTQKLIGTNNVKEI--QASWKK 550
Query: 529 DMSRSAFDI 537
+ FDI
Sbjct: 551 QIILKPFDI 559
>gi|189200012|ref|XP_001936343.1| replication factor C subunit 1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187983442|gb|EDU48930.1| replication factor C subunit 1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1096
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 91/205 (44%), Gaps = 41/205 (20%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNS------ 365
+ ++L GPPG+GKTT AH+ AK GY +VE NASD RS IE+ + V+ NS
Sbjct: 555 RAVILHGPPGIGKTTAAHLVAKLEGYDIVERNASDTRSKKLIEDGLRGVLSTNSLHGYFA 614
Query: 366 -----VMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
V + L++DE+DG +G V + +
Sbjct: 615 GDGKKVEGSKKKLVLIMDEVDGMSAGDRGGVGALAAV----------------------- 651
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
CKK + P+I ICND P ++ + F +P+V ++ SR+ I E +
Sbjct: 652 -----CKKTEV--PMILICNDRRLPKMKPFDYVTYDLPFRRPTVDQIRSRIMTITFREGL 704
Query: 481 KTSSIALTTLAEYTECDIRSCLNTL 505
K + L E + DIR +N +
Sbjct: 705 KMPPAVINALIEGSHADIRQVVNMI 729
>gi|392921918|ref|NP_001256606.1| Protein RFC-1, isoform a [Caenorhabditis elegans]
gi|3875243|emb|CAA99812.1| Protein RFC-1, isoform a [Caenorhabditis elegans]
Length = 839
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 112/455 (24%), Positives = 180/455 (39%), Gaps = 101/455 (22%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV-MADS 370
K LL G PG+GKTT A++A + G +VE+NASD RS +E KI ++ + +
Sbjct: 341 KAALLSGSPGVGKTTCAYMACQQLGLQLVEMNASDVRSKKHLEAKIGELSGSHQIEQFFG 400
Query: 371 RPKC-----------LVIDEIDGALG--DGKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
KC L++DE+DG G D G E+I + KE
Sbjct: 401 AKKCAPQDNQKVHHILIMDEVDGMSGNEDRAGISELI---------------QIIKE--- 442
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
KI P+ICICND P +R+L F +P V + SR+ IC+
Sbjct: 443 SKI-------------PIICICNDRQHPKIRTLANYCYDLRFPKPRVETIRSRMMTICSQ 489
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
E MK L + E + D+R + LQ K +G++ + +KDM+ AF
Sbjct: 490 EKMKIGKEELDEIIELSGHDVRQTIYNLQMRSK--------GVGAK-INQKDMAVDAFSA 540
Query: 538 WKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQL--QYHD 595
+ + R T + E F DY ++ + +N L + + H
Sbjct: 541 ARRLLDSRTTLMEK----------QEMFFT--------DYGIMPLFVQDNYLNMKNEKHS 582
Query: 596 PV--MLKTVKCLDCLGNSDLMHQYI-------MRTQQMPLYVYQPPLAITVHRLVSQIQK 646
P+ + K D + DL+ + I + +Q + P +A H L + IQ
Sbjct: 583 PIQAIRGIRKAADFISLGDLIDRQIRGGGSWKLLNEQSMISAALPAIATGGH-LKAMIQF 641
Query: 647 PNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTL 706
P+ S R ++++ + H K+ T S D L ++ P L
Sbjct: 642 PSWLGKNSTAGKRKRLLQQL--VQHTHLKV------SAGTHSFATDYAPMLRQKITKPLL 693
Query: 707 RPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKS 741
E + + ++S M Y L +T++
Sbjct: 694 E---------HEADGIPDVISTMTEYDLIKDDTEA 719
>gi|145508475|ref|XP_001440187.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407393|emb|CAK72790.1| unnamed protein product [Paramecium tetraurelia]
Length = 933
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 97/203 (47%), Gaps = 38/203 (18%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV----- 366
K LLL GPPG+GKTT+ + AK Y ++E NASD RS IEN + +Q N+V
Sbjct: 438 KALLLSGPPGIGKTTIIRLIAKQKSYQLIEWNASDVRSKLQIENYVKH-LQDNTVLRFKD 496
Query: 367 --MADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKK 424
+ +++DE+DG G +G + ++ M+ K++K
Sbjct: 497 ANLISEGKTIILMDEVDGMTGSDRGGNKCLIDMI--------------------KLTK-- 534
Query: 425 GCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSS 484
P++CICN+ ++R+L F +P+ + +L+ IC +E++
Sbjct: 535 --------VPIVCICNERNKQSMRTLANYCLDLQFKKPNQVEIQKKLEFICKSENINYDP 586
Query: 485 IALTTLAEYTECDIRSCLNTLQF 507
L E+++CDIR LN LQ
Sbjct: 587 AELKQQIEFSQCDIRQLLNLLQM 609
>gi|330834114|ref|YP_004408842.1| replication factor C large subunit [Metallosphaera cuprina Ar-4]
gi|329566253|gb|AEB94358.1| replication factor C large subunit [Metallosphaera cuprina Ar-4]
Length = 437
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 160/369 (43%), Gaps = 69/369 (18%)
Query: 297 DSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENK 356
DSW K G P K +LL GPPG+GKTT+A AK G ++E+NASD R+ +++
Sbjct: 32 DSWIK-----GKPNYKSVLLYGPPGIGKTTMALALAKSYGLEIIEMNASDTRNVTSLRG- 85
Query: 357 ILDVVQMNSVMADSRPKCLVIDEIDGALGDGK-GAVEVILKMVSAERKSNTAKENVAKED 415
I + + + R K + +DEIDG GA+ +L+++ SNT
Sbjct: 86 IAEKASVTGSLFSDRGKLIFLDEIDGIQSKQDFGAISTVLELI-----SNTK-------- 132
Query: 416 QPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHIC 475
P+I N+ + P LR LR K+ + + LK IC
Sbjct: 133 -----------------YPIIMAANNPWDPNLRELRNATKMIEIKKLGKIPMRRLLKKIC 175
Query: 476 NNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAF 535
NE +K A+ + E ++ D R +N LQ + + + + ++V RK+ F
Sbjct: 176 ANEKVKCEDAAIDVIIEASDGDARYAINMLQSVAEGYGQVT-QSVVEELVRRKERELDPF 234
Query: 536 DIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHD 595
+ + +F + + + +VS S DY+++ I EN+ +QY
Sbjct: 235 ETLRSLFWAQYGWQAKQAVSRSQT----------------DYELLIRWISENV-PIQYE- 276
Query: 596 PVMLKTV-KCLDCLGNSDL-MHQYIMRTQQMPLYVYQ---PPLAITVHRLVSQIQKPNLE 650
ML + + D L + + + + M + + Y + P +A+ +++ K +
Sbjct: 277 --MLNDIWRAYDALSRASIFLSRSKMSSWDLLSYTFDMMGPGVAL------AEVGKKSPN 328
Query: 651 WPKSYQRYR 659
W +++Y+
Sbjct: 329 WKAKWKKYQ 337
>gi|407033664|gb|EKE36933.1| activator 1 140 kda subunit, putative [Entamoeba nuttalli P19]
Length = 718
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 116/244 (47%), Gaps = 42/244 (17%)
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA 368
P+++ +LL G PG+GKTT++ + K G++ +E NASD R+ S+IE I + +
Sbjct: 280 PDRRAVLLAGAPGVGKTTVSKIVGKTLGFNPIEFNASDTRNKSSIELAIKRIFLNGQISI 339
Query: 369 DS---RPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKG 425
D + +++DE+DG +G + ++K + KE +
Sbjct: 340 DGSKNKKPLIIMDEVDGMSSGDRGGITELVKYI--------------KETE--------- 376
Query: 426 CKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSI 485
+P++CICND+ ++ L + + F + SV + RLK+IC+ E + S
Sbjct: 377 -------QPIVCICNDIMDKKMQPLINVCETINFSKISVIELTERLKYICDKEGVHVSDE 429
Query: 486 ALTTLAEYTECDIRSCLNTLQ-------FLDKKKEILNVMDIGSQVVGRKDMSRSAFDIW 538
L +A D+R +N LQ L +K E ++ ++I ++ R S ++F
Sbjct: 430 NLNQIASKAHGDVRYGINMLQSFVKCGVTLGEKNEDVDYVEIVPTLITR--YSSTSFIEK 487
Query: 539 KEIF 542
EIF
Sbjct: 488 NEIF 491
>gi|322778907|gb|EFZ09323.1| hypothetical protein SINV_15414 [Solenopsis invicta]
Length = 1027
Score = 96.3 bits (238), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 148/350 (42%), Gaps = 73/350 (20%)
Query: 299 WHKKTR----STGPPEQ------KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDR 348
WHK + G +Q K LL GPPG+GKTT V K GY ++E NASD R
Sbjct: 505 WHKNRQDPKVKNGTAKQTHGQSFKAALLSGPPGVGKTTTVQVVCKELGYDLLEFNASDTR 564
Query: 349 SSSTIENKILDVVQMNSVMAD---------SRPKCLVIDEIDGALG-DGKGAVEVILKMV 398
+ + ++ I ++ N+ M D + L++DE+DG G + +G ++ ++ ++
Sbjct: 565 NKTLLKEAISGLLS-NTTMKDYVTGTKQKITSKHVLLMDEVDGMAGNEDRGGLQELVGLI 623
Query: 399 SAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHV 458
P+ICICND + ++++ +
Sbjct: 624 KHTE------------------------------VPIICICNDRFNTKVKTISTHSYDLK 653
Query: 459 FIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVM 518
+ + V ++ S +K +C E++K S+ L L E T DIR +N L+FL + +
Sbjct: 654 YSKLRVEQIRSSMKSLCFKENIKISTEDLDRLIESTNHDIRQVINHLEFLSSQTSHVETT 713
Query: 519 DIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYD 578
D + KD FD+ K+ F + K + N++++ + DY+
Sbjct: 714 D---KKNSNKDFKLGPFDVTKKAFNAEEQKNM--------NLNDKIGLYFN------DYN 756
Query: 579 VIFDGIHENILQLQYHD----PVMLKTVKCLDCLGNSDLMHQYIMRTQQM 624
+ I EN L ++ + + D + DL+ + +MR+ M
Sbjct: 757 IAPLFIQENYLGVRLFQMSPRQRLERIANAADSISQGDLIEK-LMRSNMM 805
>gi|297527206|ref|YP_003669230.1| AAA ATPase central domain-containing protein [Staphylothermus
hellenicus DSM 12710]
gi|297256122|gb|ADI32331.1| AAA ATPase central domain protein [Staphylothermus hellenicus DSM
12710]
Length = 423
Score = 96.3 bits (238), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 153/366 (41%), Gaps = 73/366 (19%)
Query: 297 DSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENK 356
+SW K G P +K LL GP G GKT+L AA G +VE+NASD R IE
Sbjct: 34 ESWLK-----GKPSKKAALLYGPAGCGKTSLVEAAANEYGLEIVEMNASDFRRRQDIERI 88
Query: 357 ILDVVQMNSVMADSRPKCLVIDEIDGALGDG-KGAVEVILKMVSAERKSNTAKENVAKED 415
M S+ A R K +++DE+DG G KGA+ IL ++ R
Sbjct: 89 AKTAASMRSLFA--RGKIILLDEVDGISGTADKGAIYAILHLLEITRY------------ 134
Query: 416 QPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHIC 475
PV+ N+ + LR LR + + F + + VV LK IC
Sbjct: 135 ------------------PVVMTANNPWDQKLRPLRDASLMISFKRLTERNVVIVLKRIC 176
Query: 476 NNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDK--KKEILNVMDIGSQVVGRKDMSRS 533
E ++ AL +A +E D+RS +N LQ + + + LN + ++ + +
Sbjct: 177 QFEKLECEDAALKEIARRSEGDLRSAINDLQAIAEGFGRVTLNWV---RELSAYRTREYA 233
Query: 534 AFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQY 593
F+ K++F + + ++++ S +N+ DY+ + I+E+I Y
Sbjct: 234 PFEALKKMFNAKYIFQAKSAI-SQANI---------------DYETMMIWINEHI-PTYY 276
Query: 594 HDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPK 653
DP + + + L +D+ I +T L Y V + P + + +
Sbjct: 277 DDPE--EIWRAYEALSRADVYMGRIRKTGSWDLLSY-----------VFDMMGPGVAFAR 323
Query: 654 SYQRYR 659
RYR
Sbjct: 324 KIYRYR 329
>gi|348669616|gb|EGZ09438.1| hypothetical protein PHYSODRAFT_304972 [Phytophthora sojae]
Length = 887
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 147/343 (42%), Gaps = 67/343 (19%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM---- 367
K +LL GPPG+GKTT+A++ A+ CG+ E+NASD RS ++ + DV+ ++
Sbjct: 362 KTVLLSGPPGIGKTTIANLVARECGFECTELNASDTRSKKMLQTGLKDVLGTQALQFGVP 421
Query: 368 -ADSRPK------CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
S+ K +++DE+DG G +G +++++ +KS T
Sbjct: 422 SGKSKEKMHLARRVIIMDEVDGMSGGDRGGTAELIQLI---KKSKT-------------- 464
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
P+ICICND + +RSL + +P+ ++ RL I E +
Sbjct: 465 -------------PIICICNDRQSQKVRSLANHSFDLRMRRPTKIQIGKRLMEIGLKEGL 511
Query: 481 KTSSIALTTLAEYTECDIRSCLNTLQ---FLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
A+ A+ DIR L +Q K ++++ SQ + + + F
Sbjct: 512 HIEKNAIEEAADRCGNDIRQLLTQMQRWRLTTTKITYADMVNPSSQHNKDESLRLNPFSA 571
Query: 538 WKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYH--- 594
++IFQ+ + R NE F+ DYD++ I EN +Q +
Sbjct: 572 TQQIFQRELSFEAR----------NEAYFV--------DYDLMPLMIQENYIQSIMNNRT 613
Query: 595 --DPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAI 635
D + + + + SDL++ Y+ Q+ L Q + +
Sbjct: 614 SSDENLEAAMHASEFISESDLLNTYVRMEQRWDLLTKQAAMNV 656
>gi|121715788|ref|XP_001275503.1| chromosome transmission fidelity factor [Aspergillus clavatus NRRL
1]
gi|119403660|gb|EAW14077.1| chromosome transmission fidelity factor [Aspergillus clavatus NRRL
1]
Length = 1068
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 97/225 (43%), Gaps = 48/225 (21%)
Query: 299 WHKKTR-------STGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSS 351
WHK + G + +++ GPPG+GKTT AH+ AK G+ VVE NASD RS
Sbjct: 511 WHKNAKVNFSRPGKDGSGIYRAVMIHGPPGIGKTTSAHLVAKIEGFDVVETNASDTRSKK 570
Query: 352 TIENKILDVVQMNSVMA---------DSRPK--CLVIDEIDGALGDGKGAVEVILKMVSA 400
+E+ + D++ S+ DS K L++DE+DG +G V + +
Sbjct: 571 LVESGLGDILDTTSLQGYFSSEGKKVDSAKKNLVLIMDEVDGMSAGDRGGVGALAAI--- 627
Query: 401 ERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFI 460
KK + P+I ICN+ P ++ + F
Sbjct: 628 -------------------------AKKTHI--PLILICNERRLPKMKPFDHVTYELPFR 660
Query: 461 QPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
+P+ ++ +RL IC E +K L L E T DIR +N L
Sbjct: 661 RPTAEQIRARLSTICFREGLKIPPPVLDGLIEGTNSDIRQVINML 705
>gi|395645578|ref|ZP_10433438.1| Replication factor C large subunit [Methanofollis liminatans DSM
4140]
gi|395442318|gb|EJG07075.1| Replication factor C large subunit [Methanofollis liminatans DSM
4140]
Length = 452
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 113/245 (46%), Gaps = 40/245 (16%)
Query: 299 WHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKIL 358
W + R PP L+ G PG+GKT+ AH A+ G+ +VE+NASD R+ + IE ++
Sbjct: 29 WARSWRRGTPP----LIFYGKPGIGKTSAAHALARDMGWEIVELNASDQRTKAIIE-RVA 83
Query: 359 DVVQMNSVMADSRPKCLVIDEIDGALGDG-KGAVEVILKMVSAERKSNTAKENVAKEDQP 417
+ ++ + K +++DE D G +G I++++ R+
Sbjct: 84 GTSSTTTSLSGAERKLIILDEADNLHGTADRGGARAIMEIIKNARQ-------------- 129
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
P++ I ND+Y A + ++ + + +F +V RL+ IC +
Sbjct: 130 ----------------PIVLIANDIYGLA-KEIKALGEPVLFRAIQARSMVPRLREICRD 172
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
E + S ALT +AE D+RS +N L +E + D+ + +KD+ + FD+
Sbjct: 173 EGLACSPEALTGIAESAGGDMRSAVNMLYAAAIGREDVGEADVHTN---QKDLRATIFDL 229
Query: 538 WKEIF 542
IF
Sbjct: 230 IAAIF 234
>gi|406863946|gb|EKD16992.1| hypothetical protein MBM_04569 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1072
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 96/205 (46%), Gaps = 41/205 (20%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIEN---KILDVVQMNSVMA 368
+ +++ GPPG+GKTT AH+AAK GY V+E NASD RS +E+ ++L+ +N A
Sbjct: 520 RAIIIHGPPGIGKTTAAHMAAKLSGYDVIESNASDTRSKKLVESGLSEVLNNTSLNGFFA 579
Query: 369 D--------SRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
+ L++DE+DG +G V + K+
Sbjct: 580 GDGKDVNLQKKKIVLIMDEVDGMSAGDRGGVGALAKV----------------------- 616
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
CKK + P+I ICN+ P ++ + F +P++ +V SR+ IC+ E +
Sbjct: 617 -----CKKTDI--PMILICNERKLPKMKPFDFVTFDIPFRRPTLEQVRSRIATICHREGL 669
Query: 481 KTSSIALTTLAEYTECDIRSCLNTL 505
K + L E + DIR +N +
Sbjct: 670 KLPGNVIDALIEGSNRDIRQIINMI 694
>gi|150403244|ref|YP_001330538.1| replication factor C large subunit [Methanococcus maripaludis C7]
gi|166977385|sp|A6VIW1.1|RFCL_METM7 RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|150034274|gb|ABR66387.1| AAA ATPase central domain protein [Methanococcus maripaludis C7]
Length = 482
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 141/333 (42%), Gaps = 71/333 (21%)
Query: 310 EQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMAD 369
+QK +LL GPPG GKTTLA+ AK + V+E+NASD R+ I ++++ + +
Sbjct: 38 KQKPILLAGPPGSGKTTLAYAIAKDYAFDVIELNASDKRNKDVI-SQVVGTAATSKSLTG 96
Query: 370 SRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKK 428
R +V+DE+DG G D +G V I+K++ EN
Sbjct: 97 KRT-LIVLDEVDGLSGNDDRGGVAEIIKVLK-------TAEN------------------ 130
Query: 429 ASLLRPVICICNDLYAPALRSLR------QIAKVHVFIQPSVSRVVSRLKHICNNESMKT 482
PVI ND+Y PAL +LR + VH P V L+ I E +
Sbjct: 131 -----PVILTANDVYKPALMTLRNSVNLINVGSVHTNSIPPV------LRKIALKEGFEI 179
Query: 483 SSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIF 542
+ T+A + D+R+ +N LQ L I V D ++ + +D +S FD + I
Sbjct: 180 DEKVIKTIASHAGGDLRAAINDLQSLATGGSI-EVED--AKELPDRDSEKSIFDAMRIIM 236
Query: 543 QKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQ--LQYHDPVMLK 600
KT + S++ +V E + IS EN+ + L+Y D
Sbjct: 237 ---KTTHYDIATSATRDVKEELGTIEEWIS-------------ENLPKEYLKYKD----- 275
Query: 601 TVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPL 633
D L SD+ + R Q L+ Y L
Sbjct: 276 LANGYDYLSKSDVFLGRVFRRQYFGLWRYASAL 308
>gi|154281839|ref|XP_001541732.1| hypothetical protein HCAG_03830 [Ajellomyces capsulatus NAm1]
gi|150411911|gb|EDN07299.1| hypothetical protein HCAG_03830 [Ajellomyces capsulatus NAm1]
Length = 1066
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 123/328 (37%), Gaps = 105/328 (32%)
Query: 189 PEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSAL 248
P V ++LW KYAP S + + ++ ++ WL+
Sbjct: 460 PAPAQVDDRLWTSKYAPTSLSMICGNKGAVEKLQTWLR---------------------- 497
Query: 249 RRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGP 308
N+RNS+ +++ KG +D G
Sbjct: 498 -----------------------------NWRNSSMADFK----KGGKD---------GT 515
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENK---ILDVVQMNS 365
+ +++ GPPG+GKTT AH+ AK Y VVE NASD RS S +E +LD +
Sbjct: 516 GIYRAVMIHGPPGIGKTTAAHLVAKLENYDVVESNASDTRSKSLVETGLRGVLDTTSLQG 575
Query: 366 VMADSRPKC--------LVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
+ K L++DE+DG +G V + +
Sbjct: 576 YFSGEGKKVESGKKNLVLIMDEVDGMSAGDRGGVGALAAV-------------------- 615
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
KK + P+I ICN+ P +R + F +P+V ++ +RL IC
Sbjct: 616 --------AKKTRI--PMILICNERRLPKMRPFDSVTFDLPFRRPTVEQIRARLSTICYR 665
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTL 505
E +K L L + T DIR +N L
Sbjct: 666 EGLKIPPQVLDNLIQGTHADIRQVINML 693
>gi|149248210|ref|XP_001528492.1| activator 1 95 kDa subunit [Lodderomyces elongisporus NRRL YB-4239]
gi|146448446|gb|EDK42834.1| activator 1 95 kDa subunit [Lodderomyces elongisporus NRRL YB-4239]
Length = 709
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 143/375 (38%), Gaps = 125/375 (33%)
Query: 188 LPEKP----VVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEE 243
+P +P ++LW DK+AP F++L ++ +++ WL+ W
Sbjct: 135 MPPEPKQEVAAKDKLWTDKHAPKDFSQLCGNKGQVKKLKDWLENW--------------- 179
Query: 244 VLSALRRHSTISQNKKQNDSSFTRKNRG---NRWSNGNFRNSNNLEYENSNSKGIQDSWH 300
F K RG + S GNFR +
Sbjct: 180 ---------------------FEYKARGFNMGKDSPGNFRAA------------------ 200
Query: 301 KKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDV 360
L+ GPPG+GKTT AH+ A G+ V+E NASD RS S + + I +
Sbjct: 201 --------------LISGPPGIGKTTAAHMVANSLGFDVLEKNASDVRSKSLLNSTIKSI 246
Query: 361 VQMNSVMA---------------DSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSN 405
+ SV+ ++R CL++DE+DG G + + R +N
Sbjct: 247 LGNTSVVGFFKHRGEEVKQENSENNRKICLIMDEVDGMSSGDHGGAGALSQFC---RITN 303
Query: 406 TAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVS 465
T P+I ICND P +R+ ++ F +P+ +
Sbjct: 304 T---------------------------PLILICNDKSLPKMRTFDKVTYDLPFRRPTEN 336
Query: 466 RVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKE---ILNVMDIGS 522
V SRL I E +K + L + T DIR +N L + K ++ LNV +I
Sbjct: 337 EVRSRLMTIALREGVKLDPSIIGQLVQATSNDIRQMINLLSTVSKTQKHIGALNVQEI-- 394
Query: 523 QVVGRKDMSRSAFDI 537
Q +K + FDI
Sbjct: 395 QQSWKKQVILKPFDI 409
>gi|344304256|gb|EGW34505.1| hypothetical protein SPAPADRAFT_65637 [Spathaspora passalidarum
NRRL Y-27907]
Length = 793
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 122/490 (24%), Positives = 205/490 (41%), Gaps = 123/490 (25%)
Query: 172 FNKALNSSSEGQSDRSLPE----KPVVH--EQLWVDKYAPNSFTELLS--DEQTNREVLL 223
F+KA ++ +++R L E PV Q+W +KY P F +L S +++ R VL
Sbjct: 113 FSKANLHNTIKENNRKLAEMEEHTPVASTSSQIWTEKYRPTKFLQLCSAGNDKQYRLVLH 172
Query: 224 WLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSN 283
WLK +WS+ F
Sbjct: 173 WLK----------------------------------------------KWSSVVF---- 182
Query: 284 NLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVN 343
+ + DS H + G P +K+LL+ GPPG+GKT + H+ AK GY + E+N
Sbjct: 183 --------GEQVHDSDH--SDGLGRPHRKILLIHGPPGIGKTAVVHILAKQMGYAIQELN 232
Query: 344 ASDD----------------RSSSTIENKILDV-VQMNSVMADSRPKCLVIDEIDGALGD 386
A++ ++S ++ KIL+ + S+P CLVIDEID +L +
Sbjct: 233 AANSMDILPQSAANGSNPYANAASALKLKILNALTSNSLTSTTSKPSCLVIDEID-SLAN 291
Query: 387 GKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPA 446
V+V+ +V++++K+ K A E+ SKK K L RP+ICI N++Y+
Sbjct: 292 ANDVVKVLNDLVASDQKALNKKLKKAST---EETSKKSKKKDVLLSRPIICIANEIYSNQ 348
Query: 447 --------LRSLRQIAKVHVFIQP--------------SVSRVVSRLKHICNNESMKTSS 484
+ LR IA++ F +P ++ V L I E + S
Sbjct: 349 NGKFGPNPMDKLRPIAEIVPFRKPQSGKTTTGQKFGGNAMKSVKDHLMWINEREKLGLDS 408
Query: 485 IALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQK 544
A+ + + + DIR+C+N +QF KK N + Q+ S + + E+F++
Sbjct: 409 RAIGDIVDTCDGDIRACINYIQFNAKKTGTANDSSMDKQI--------SWYSMVDELFRR 460
Query: 545 R-KTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYD-VIFDGIHENILQLQYHDPVMLKTV 602
+ K+ N + N S++SN +D VI + + + D +++
Sbjct: 461 EPQLKKDENFMFLLDKFMNGTG--KSVVSNSSSFDRVIMGSFNRYLDTVHLQDDSLIRPS 518
Query: 603 KCLDCLGNSD 612
+ D LG D
Sbjct: 519 EFSDWLGFYD 528
>gi|344228229|gb|EGV60115.1| DNA replication factor C, large subunit [Candida tenuis ATCC 10573]
Length = 774
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 102/219 (46%), Gaps = 44/219 (20%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA--- 368
+ L+ GPPG+GKTT AH+ A+ G+ V+E NASD RS S + + I V+ SVM
Sbjct: 275 RACLISGPPGIGKTTAAHLIAEDLGFDVLEKNASDVRSKSLLNSDIKSVLNNTSVMGFFQ 334
Query: 369 ---------DSRPKCLVIDEIDG-ALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPE 418
+ R CL++DE+DG + GD GA + Q
Sbjct: 335 NRHADVHQENERRFCLIMDEVDGMSSGDHGGAGAL---------------------SQFC 373
Query: 419 KISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNE 478
+I+K P+I ICND P +R+ ++ F +PS + V +R+ IC+ E
Sbjct: 374 RITK----------MPMILICNDKSLPKMRTFDRVTYDLAFRRPSENEVKARIMTICHRE 423
Query: 479 SMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNV 517
+K + L + T DIR +N L + K ++ +
Sbjct: 424 KIKIDPSIIGQLVQTTNNDIRQMINLLSTVSKTQKTIGA 462
>gi|296241870|ref|YP_003649357.1| replication factor C large subunit [Thermosphaera aggregans DSM
11486]
gi|296094454|gb|ADG90405.1| replication factor C large subunit [Thermosphaera aggregans DSM
11486]
Length = 430
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 145/324 (44%), Gaps = 55/324 (16%)
Query: 308 PPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM 367
P ++K +LL GP G GKT+L A+ GY + E+NASD R S IE+ I + S +
Sbjct: 39 PGQKKAVLLHGPAGCGKTSLVEAVARSKGYQLFEMNASDFRRKSDIES-IAKIAAQTSGL 97
Query: 368 ADSRPKCLVIDEIDG--ALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKG 425
R K +++DE+DG A D +G +E I++++ NV+K
Sbjct: 98 TGKR-KIILLDEVDGINARAD-EGGIEAIIELI-----------NVSKN----------- 133
Query: 426 CKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSI 485
P++ N+ Y+ L LRQ + S + VV+ LK IC E ++ S
Sbjct: 134 --------PIVMTANNPYSKNLLPLRQNVLEIPMKRLSETHVVTALKKICGAEKIECSDE 185
Query: 486 ALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKR 545
AL +A+ +E D+RS +N LQ + + + +++ + +D + ++ + +F
Sbjct: 186 ALREIAKRSEGDLRSAINDLQAIAETYGKVT-LELVKSLATYRDRQYAPYEALQRLF--- 241
Query: 546 KTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCL 605
N F +L S DYD +F ++E+I Y DP + +
Sbjct: 242 -------------NAKYVFQAKDALTSTDLDYDELFLWLNEHI-PTYYEDPE--EVARAY 285
Query: 606 DCLGNSDLMHQYIMRTQQMPLYVY 629
+ L +D+ + I Q L Y
Sbjct: 286 EALSRADVYYGRIKSRGQWDLLSY 309
>gi|344255969|gb|EGW12073.1| Replication factor C subunit 1 [Cricetulus griseus]
Length = 1065
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 156/389 (40%), Gaps = 105/389 (26%)
Query: 167 VEQEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLS---DEQTNREVLL 223
EQ K N+ ++G + S K V LWVDKY P S ++ D+ ++L
Sbjct: 477 TEQVVKEKPGNNRAQGPAKNSSGNK--VESLLWVDKYKPTSLKNIIGQQGDQSCANKLLR 534
Query: 224 WLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQND-SSFTRKNRGNRWSNGNFRNS 282
WL+ W +S+ EE ++H+ S++ ++D SSF
Sbjct: 535 WLRNWH--------KSSPEE-----KKHARFSKHSSKDDGSSF----------------- 564
Query: 283 NNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEV 342
K LL GPPG+GKTT A + + GY VE+
Sbjct: 565 -----------------------------KAALLSGPPGVGKTTTASLVCQELGYSYVEL 595
Query: 343 NASDDRSSSTIENKILDVVQMNSV------MADSRPKCLVIDEIDGALG-DGKGAVEVIL 395
NASD RS ++++ + + + S+ A L++DE+DG G + +G ++ ++
Sbjct: 596 NASDTRSKNSLKTIVAESLDNTSIKGFYTRRATPSKHALIMDEVDGMAGNEDRGGIQELI 655
Query: 396 KMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAK 455
++ + KI P+IC+CND P +RSL
Sbjct: 656 GLI-----------------KHTKI-------------PIICMCNDRNHPKIRSLVHYCF 685
Query: 456 VHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEIL 515
F +P V ++ S + I E +K A+ + D+R L+ + + + L
Sbjct: 686 DLRFQRPRVEQIKSAMLSIAFKEGLKIPPPAMNEIILGANQDVRQVLHNMSMWCAQSKAL 745
Query: 516 NV--MDIGSQVVGRKDMSRSAFDIWKEIF 542
SQ +KD+ FD+ +++F
Sbjct: 746 TYDQAKADSQRA-KKDIRLGPFDVARKVF 773
>gi|347965669|ref|XP_321857.5| AGAP001290-PA [Anopheles gambiae str. PEST]
gi|333470404|gb|EAA01207.6| AGAP001290-PA [Anopheles gambiae str. PEST]
Length = 1053
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 137/324 (42%), Gaps = 62/324 (19%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMAD-- 369
K LL GPPG+GKTT A + K G+ VE NASD RS ++ ++ +++ S+
Sbjct: 538 KAALLSGPPGVGKTTTATLVCKELGFDTVEFNASDTRSKRLLKEEVSELLNSKSLAGYFG 597
Query: 370 ------SRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISK 422
S L++DE+DG G + +G ++ ++ ++
Sbjct: 598 GRSEKVSSKHVLLMDEVDGMAGNEDRGGMQELIALI------------------------ 633
Query: 423 KKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKT 482
K S + PVIC+CND P +RSL F +P V ++ + +C E +K
Sbjct: 634 -----KESHI-PVICMCNDRNHPKIRSLVNYCFDLRFNRPRVEQIKGAMMSVCFKEQLKL 687
Query: 483 SSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV----VGRKDMSRSAFDIW 538
S L + T D+R LN L K + + + S +KD+ +D+
Sbjct: 688 SPGVLEEIIAGTGGDVRQTLNHLALYSAGKSMAASLSVDSAKKHADSAKKDIKIGPWDVI 747
Query: 539 KEIFQKRKTKRLRNSVSSSSNVSNEFD-FLHSLISNRGDYDVIFDGIHENILQLQYHDPV 597
+++F K + ++++ D F H DY++ + EN L++Q P
Sbjct: 748 RKVFSAEDHKHM--------TLNDKADLFFH-------DYNIAPLFVQENYLKVQPKAPR 792
Query: 598 ---MLKTVKCLDCLGNSDLMHQYI 618
+ + D L D++ + I
Sbjct: 793 TEWLDRIALTADSLSRGDMVERRI 816
>gi|118431492|ref|NP_147998.2| replication factor C large subunit [Aeropyrum pernix K1]
gi|42559546|sp|Q9YBS5.2|RFCL_AERPE RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|116062817|dbj|BAA80523.2| replication factor C large subunit [Aeropyrum pernix K1]
Length = 479
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/420 (23%), Positives = 176/420 (41%), Gaps = 69/420 (16%)
Query: 291 NSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSS 350
+K I W K P+++ LL GPPG+GKT+L A ++E+NASD R
Sbjct: 29 QAKKILVPWFKAWLEGRKPDKRAALLYGPPGVGKTSLVEAIASEFNLEMIELNASDYRRR 88
Query: 351 STIENKILDVVQMNSVMADSRPKCLVIDEIDGA-LGDGKGAVEVILKMVSAERKSNTAKE 409
S IE + + S+ R +++DE+DG + G +E +L ++ E
Sbjct: 89 SDIERIVGAASRKRSMF--KRGVVILLDEVDGINPREDAGGIEALLSVIK-------TTE 139
Query: 410 NVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVS 469
N P++ ND + LR LR+++ + F +++ +V+
Sbjct: 140 N-----------------------PIVMTANDPWKDFLRPLREVSLMVEFRPLTLTHIVA 176
Query: 470 RLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKD 529
L+ IC E ++ AL +AE +E D+RS +N LQ + + + + V GR+
Sbjct: 177 VLQRICEAERIECEREALRYIAERSEGDLRSAINDLQAVAEGYGRVTLTLAREIVRGRE- 235
Query: 530 MSRSAFDIWK---EIFQK-RKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIH 585
+ DIW+ ++F K R+ R +VS S DY+ + I+
Sbjct: 236 ---KSIDIWRTLNQVFYKPRQAWMARKAVSQSEK----------------DYEELIAWIN 276
Query: 586 ENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPL---AITVHRLVS 642
+NI + +Y +P L + D L + + L Y L + R+
Sbjct: 277 DNIPR-KYGEPSDL--FRAFDALARATVFLGRAKFGGNWELLSYVFDLMGPGVAYARMEG 333
Query: 643 QIQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYIS-RHLSTESLVEDSISPLLHIL 701
++ K +P+ + M ++ + K+ ++ R L + V+ + P+LH +
Sbjct: 334 EVLKTRYSYPEKIR-----MMAQLRGVRETREKLAEVLAKRLLMSRRAVKTEVLPILHYI 388
>gi|134046379|ref|YP_001097864.1| replication factor C large subunit [Methanococcus maripaludis C5]
gi|166977384|sp|A4FZL6.1|RFCL_METM5 RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|132664004|gb|ABO35650.1| replication factor C large subunit [Methanococcus maripaludis C5]
Length = 484
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 139/333 (41%), Gaps = 71/333 (21%)
Query: 310 EQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMAD 369
+QK +LL GPPG GKTTLAH AK + V+E+NASD R+ I + S+
Sbjct: 38 KQKPILLAGPPGSGKTTLAHAIAKDYAFDVIELNASDKRNKDVIAQVVGTAATSKSLTG- 96
Query: 370 SRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKK 428
+ +V+DE+DG G D +G V I+K++ EN
Sbjct: 97 -KRTLIVLDEVDGLSGNDDRGGVAEIIKVLKTA-------EN------------------ 130
Query: 429 ASLLRPVICICNDLYAPALRSLR------QIAKVHVFIQPSVSRVVSRLKHICNNESMKT 482
PVI ND+Y PAL +LR + VH P V L+ I E +
Sbjct: 131 -----PVILTANDVYKPALMTLRNNVNLINVGSVHTNSIPPV------LRKIALKEGFEI 179
Query: 483 SSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIF 542
+ T+A ++ D+R+ +N LQ L L V D ++ + +D +S FD + I
Sbjct: 180 DEKVIKTIASHSGGDLRAAINDLQSLATGGS-LEVED--AKELPDRDSEKSIFDAMRIIM 236
Query: 543 QKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQ--LQYHDPVMLK 600
KT + S++ +V + + IS EN+ + L+Y D
Sbjct: 237 ---KTTHYDIATSATRDVKEDLGTIQEWIS-------------ENLPKEYLRYKD----- 275
Query: 601 TVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPL 633
D L SD+ + + Q L+ Y L
Sbjct: 276 LAGGYDYLSKSDVFLGRVFKRQYFGLWRYASAL 308
>gi|156938087|ref|YP_001435883.1| replication factor C large subunit [Ignicoccus hospitalis KIN4/I]
gi|166977383|sp|A8AC24.1|RFCL_IGNH4 RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|156567071|gb|ABU82476.1| replication factor C large subunit [Ignicoccus hospitalis KIN4/I]
Length = 476
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 148/343 (43%), Gaps = 51/343 (14%)
Query: 288 ENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDD 347
+ +K + W KK S PPE++ LL GPPG+GKT+L +E+NASD
Sbjct: 20 DQEKAKEVLIPWIKKWLSGTPPEKRAALLWGPPGVGKTSLVEAICNEFNLEKIEMNASDF 79
Query: 348 RSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALGDG-KGAVEVILKMVSAERKSNT 406
R IE ++ + + + +++DE+DG G +GAV IL+++ +
Sbjct: 80 RRKGDIE-RVAIAAATKKPLPPWKGRLILLDEVDGLSPRGDEGAVAAILELIKKTKN--- 135
Query: 407 AKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSR 466
P++ ND + LR +R+ + + F + ++
Sbjct: 136 ---------------------------PIVMTANDPWGTHLRPIREESLLVEFKRIPKTK 168
Query: 467 VVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVG 526
L IC E + A+ + E + D+R+ +N LQ + + + +D+ S ++
Sbjct: 169 AREFLLKICEKEGVYCEKEAVDYIIEKNKGDLRASINDLQSIAEAYGKVT-LDLASALLV 227
Query: 527 RKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHE 586
+D + +++ + +F + + + R +V+S+ DYD +F I E
Sbjct: 228 ERDRVLTPWEMLQSLFYSKYSWQARKAVTSTDL----------------DYDTLFLWIAE 271
Query: 587 NILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVY 629
N+ + DP L + ++ + +D+++ I RT L Y
Sbjct: 272 NVPKQYGDDPYDL--WRGMEAVSRADVIYGRIRRTMNWSLLPY 312
>gi|15678268|ref|NP_275383.1| replication factor C large subunit [Methanothermobacter
thermautotrophicus str. Delta H]
gi|42559321|sp|O26342.1|RFCL_METTH RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit;
AltName: Full=MthRFC large subunit
gi|2621289|gb|AAB84746.1| replication factor C, large subunit [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 479
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 146/338 (43%), Gaps = 62/338 (18%)
Query: 299 WHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKIL 358
W K ++ P QK LLL GPPG GKTTLAH+ K +E+NASD RS +
Sbjct: 28 WIKAWKAGKP--QKPLLLVGPPGTGKTTLAHIIGKEFS-DTLELNASDRRSQDALMRSAG 84
Query: 359 DVVQMNSVMADSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
+ S+ + K +++DE+DG G + +G V+ I +++ R
Sbjct: 85 EASATRSLF-NHDLKLIILDEVDGIHGNEDRGGVQAINRIIKESR--------------- 128
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
P++ ND Y+ L+S++ +V + S + + L+ IC
Sbjct: 129 ---------------HPMVLTANDPYSKRLQSIKPRCRVLNLRKVHTSSIAAALRRICRA 173
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVV--GRKDMSRSAF 535
E ++ L LA+ + D+RS +N L+ + + +E IG +++ G KD + + F
Sbjct: 174 EGIECPDDVLRELAKRSRGDLRSAINDLEAMAEGEE-----RIGEELLKMGEKDATSNLF 228
Query: 536 DIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHD 595
D + + + R ++R ++ D ++ + I EN+ + +Y
Sbjct: 229 DAVRAVLKSRDVSKVREAMRVDD-----------------DPTLVLEFIAENVPR-EYEK 270
Query: 596 PVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPL 633
P + + D L +D+ +RT+ + Y L
Sbjct: 271 PNEIS--RAYDMLSRADIFFGRAVRTRNYTYWRYASEL 306
>gi|307197038|gb|EFN78410.1| Replication factor C subunit 1 [Harpegnathos saltator]
Length = 1045
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 152/356 (42%), Gaps = 76/356 (21%)
Query: 299 WHKK-------TRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSS 351
WHK ++ K LL G PG+GKTT A + K GY ++E NASD RS +
Sbjct: 532 WHKNRQDPKSSSKQNNGQSFKAALLSGSPGVGKTTTAQIVCKELGYDLLEFNASDTRSKT 591
Query: 352 TIENKILDVVQMNSVMAD---------SRPKCLVIDEIDGALG-DGKGAVEVILKMVSAE 401
++ ++ ++ N+ M D + L++DE+DG G + +G ++ ++ ++
Sbjct: 592 LLKEQVSGLLS-NTTMKDYCTGNKQKITSKHALLMDEVDGMAGNEDRGGLQELVNLI--- 647
Query: 402 RKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQ 461
K + PVICICND + +R+L F +
Sbjct: 648 -------------------------KHTDV--PVICICNDRFNTKMRTLSCHTYDLKFPK 680
Query: 462 PSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIG 521
V ++ S +K +C E+++ S+ L L E T DIR +N L+FL K + D
Sbjct: 681 LRVEQIRSSMKSLCFKENIQISTEDLDRLIESTNYDIRQVINHLEFLSGKTAHVEAAD-- 738
Query: 522 SQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFD-FLHSLISNRGDYDVI 580
+ K+ FD+ K +F + + S N++++ + H DY++
Sbjct: 739 -KKHSNKNFKLGPFDVAKLVFNAAEQR--------SMNLNDKIGLYFH-------DYNIA 782
Query: 581 FDGIHENILQLQYHDPVML----KTVKCLDCLGNSDLMHQYIMRTQQM----PLYV 628
+ EN ++ L K + D + DL+ + +MR+ M PL+
Sbjct: 783 PLFVQENYPAVKLSQVSSLQRLEKIARAADSISQGDLIEK-VMRSSMMWSLLPLHA 837
>gi|296908|emb|CAA80355.1| PO-GA [Homo sapiens]
gi|2827257|gb|AAB99788.1| DNA binding protein [Homo sapiens]
Length = 1147
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 143/364 (39%), Gaps = 104/364 (28%)
Query: 194 VHEQLWVDKYAPNSFTELLS---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRR 250
V LWVDKY P S ++ D+ ++LLWL+ W +S+SE+ ++
Sbjct: 581 VENLLWVDKYKPTSLKTIIGQQGDQSCANKLLLWLRNWQ--------KSSSED-----KK 627
Query: 251 HSTISQ-NKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPP 309
HS + + K ++SSF
Sbjct: 628 HSKFGKFSGKDDNSSF-------------------------------------------- 643
Query: 310 EQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA- 368
K LL GPPG+GKTT A + + GY VE+N SD RS S+++ + + + S+
Sbjct: 644 --KAALLSGPPGVGKTTTASLVCQELGYSYVELNRSDTRSKSSLKAIVAESLNNTSIKGF 701
Query: 369 --------DSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEK 419
S L++DE+DG G + +G ++ ++ ++ + K
Sbjct: 702 YSNGAASSVSTKHALIMDEVDGMAGNEDRGGIQELIGLI-----------------KHTK 744
Query: 420 ISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNES 479
I P+IC+CND P +RSL F +P V ++ + I E
Sbjct: 745 I-------------PIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAMMSIAFKEG 791
Query: 480 MKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV-VGRKDMSRSAFDIW 538
+K A+ + DIR L+ L + + L + +KD+ FD+
Sbjct: 792 LKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRAKKDIKMGPFDVA 851
Query: 539 KEIF 542
+++F
Sbjct: 852 RKVF 855
>gi|319411789|emb|CBQ73832.1| related to replication factor C protein [Sporisorium reilianum
SRZ2]
Length = 954
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 99/234 (42%), Gaps = 51/234 (21%)
Query: 293 KGIQDSWHKKTRSTGPPEQKV---LLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRS 349
K DS+ + GP V +L+ GPPG+GKTT AH+ AK GY +E NASD RS
Sbjct: 418 KAWPDSYRSNFKKPGPTGMNVFRAVLISGPPGIGKTTSAHLVAKMEGYSPLEFNASDTRS 477
Query: 350 SS--------TIENKILDVVQMNSVMADSR-----PK-----CLVIDEIDGALGDGKGAV 391
TI NK LD N+V S P+ L++DE+DG G +G V
Sbjct: 478 KKLIEGMLQDTINNKSLDSWYSNTVKQASSSSSDLPRIHERTVLIMDEVDGMSGGDRGGV 537
Query: 392 EVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLR 451
I ++ KK + P+ICICND +R
Sbjct: 538 GAINALI----------------------------KKTKV--PIICICNDRRNQKMRPFE 567
Query: 452 QIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
F +P ++V SR+ I E +K + L E + DIRS +N L
Sbjct: 568 HTTYNLSFRKPDANQVKSRMLSIAFKEKLKIPGEVMAQLIEAAQSDIRSVINML 621
>gi|431897157|gb|ELK06419.1| Replication factor C subunit 1 [Pteropus alecto]
Length = 1252
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 124/565 (21%), Positives = 204/565 (36%), Gaps = 158/565 (27%)
Query: 168 EQEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLS---DEQTNREVLLW 224
EQEA + NS + +D S K V LWVDKY P S ++ D+ ++L W
Sbjct: 640 EQEAEDTGGNSWARNWADDSSENK--VENLLWVDKYKPTSLKTIIGQQGDQSCANKLLRW 697
Query: 225 LKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQND-SSFTRKNRGNRWSNGNFRNSN 283
L+ W H S++KK F K+ G+ +
Sbjct: 698 LQNW----------------------HKRPSEDKKHAKFGKFAGKDDGSSF--------- 726
Query: 284 NLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVN 343
K LL GPPG+GKTT A + + GY VE+N
Sbjct: 727 ----------------------------KAALLSGPPGVGKTTTASLVCQELGYSYVELN 758
Query: 344 ASDDRSSSTIENKILDVVQMNSVMA---------DSRPKCLVIDEIDGALG-DGKGAVEV 393
ASD RS ++++ + + + S+ S L++DE+DG G + +G ++
Sbjct: 759 ASDTRSKNSLKEIVAESLNNTSIRGFYSSGAAHSVSTKHALIMDEVDGMAGTEDRGGIQE 818
Query: 394 ILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQI 453
++ ++ + KI P+IC+CND P +RSL
Sbjct: 819 LIGLI-----------------KHTKI-------------PIICMCNDRNHPKIRSLVHY 848
Query: 454 AKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKE 513
F +P V ++ + I E +K A+ + DIR L+ L + +
Sbjct: 849 CFDLRFQRPRVEQIKGAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSK 908
Query: 514 ILNVMDIGSQV-VGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLIS 572
L + +KD+ FD+ +++F + S V F H
Sbjct: 909 ALTYDQAKADSHRAKKDIKLGPFDVARKVFA------TGEETAHMSLVDKSDLFFH---- 958
Query: 573 NRGDYDVIFDGIHENILQLQYHDPV---------MLKTVKCLDCLGNSDLMHQYIMRTQQ 623
DY + + EN L ++ PV ++ + D + + DL+ + I Q
Sbjct: 959 ---DYSIAPLFVQENYLHVK---PVAAGGDMKKHLMLLSRAADSICDGDLVDRQIRSRQN 1012
Query: 624 MPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSW---------HS 674
L P AI L ++ + +M + F SW H
Sbjct: 1013 WSLL---PTQAIYASVLPGELMR--------------GYMTQFPSFPSWLGKHSSTGKHD 1055
Query: 675 KIPPYISRHLSTESLVEDS-ISPLL 698
+I ++ H+S V+ I P L
Sbjct: 1056 RIIQDLALHMSLSKDVQTGFIGPAL 1080
>gi|449665358|ref|XP_002169845.2| PREDICTED: replication factor C subunit 1-like [Hydra
magnipapillata]
gi|205364119|gb|ACI04517.1| replication factor C large subunit [Hydra magnipapillata]
Length = 1116
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 104/238 (43%), Gaps = 37/238 (15%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA--- 368
K LL GPPG+GKTT A++ + G+ +E+NASD R +E I D + +V
Sbjct: 598 KAALLSGPPGVGKTTTANLVCQELGFSFIEMNASDTRGKKALETIIKDALSNKTVAGVMQ 657
Query: 369 --DSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKG 425
L++DE+DG G + +G ++ +++++
Sbjct: 658 GNTGDKHALIMDEVDGMAGTEDRGGMQELIQLI--------------------------- 690
Query: 426 CKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSI 485
KK + P+IC+CND P +RSL F +P V ++ + E K
Sbjct: 691 -KKTKI--PIICMCNDRNHPKVRSLSNYCFDLRFYKPRVEQIKGFAMSVAAREGFKIQPQ 747
Query: 486 ALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVV-GRKDMSRSAFDIWKEIF 542
A+ + DIR L+ LQ + K +LN + S K++ FDI K+++
Sbjct: 748 AMEQIVVGANQDIRQVLHNLQMWNSTKSVLNYDEAKSNANDASKNIKLGPFDIVKQLY 805
>gi|330921995|ref|XP_003299650.1| hypothetical protein PTT_10692 [Pyrenophora teres f. teres 0-1]
gi|311326573|gb|EFQ92247.1| hypothetical protein PTT_10692 [Pyrenophora teres f. teres 0-1]
Length = 1085
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 91/205 (44%), Gaps = 41/205 (20%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNS------ 365
+ ++L GPPG+GKTT AH+ AK GY +VE NASD RS IE+ + V+ NS
Sbjct: 554 RAIILHGPPGIGKTTAAHLVAKLEGYDIVERNASDTRSKKLIEDGLRGVLSTNSLHGYFA 613
Query: 366 -----VMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
V + L++DE+DG +G V + +
Sbjct: 614 GDGKKVEGSKKKLVLIMDEVDGMSAGDRGGVGALATV----------------------- 650
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
CKK + P+I ICND P ++ + F +P+V ++ SR+ I E +
Sbjct: 651 -----CKKTEV--PMILICNDRRLPKMKPFDYVTYDLPFRRPTVDQIRSRIMTITFREGL 703
Query: 481 KTSSIALTTLAEYTECDIRSCLNTL 505
+ + L E + DIR +N +
Sbjct: 704 RMPPPVINALIEGSHADIRQVVNMI 728
>gi|407917716|gb|EKG11020.1| BRCT domain-containing protein [Macrophomina phaseolina MS6]
Length = 1072
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 41/205 (20%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA--- 368
+ +++ GPPG+GKTT AH+ AK GY +VE NASD RS ++ + V++ S++
Sbjct: 541 RAVMIHGPPGIGKTTAAHLVAKLEGYDIVESNASDTRSKKLVQEGLQGVLETTSLLGYFA 600
Query: 369 -------DSRPK-CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
+SR K L++DE+DG +G V + +
Sbjct: 601 GDGKKVEESRKKLVLIMDEVDGMSAGDRGGVGALAAV----------------------- 637
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
CKK+ + P+I ICND P ++ + F +P+ ++ SR+ I E +
Sbjct: 638 -----CKKSQI--PMILICNDRRLPKMKPFDYVTYDLPFRRPTTDQIRSRIMTIAYREGL 690
Query: 481 KTSSIALTTLAEYTECDIRSCLNTL 505
K + L E T DIR +N +
Sbjct: 691 KMPKNVVDALIEGTNADIRQVVNMV 715
>gi|432328446|ref|YP_007246590.1| AAA ATPase [Aciduliprofundum sp. MAR08-339]
gi|432135155|gb|AGB04424.1| AAA ATPase [Aciduliprofundum sp. MAR08-339]
Length = 434
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 150/331 (45%), Gaps = 51/331 (15%)
Query: 307 GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV 366
G P K L+L G PG GKTT+A V A+ G+ V+E+NASD R+ E KI ++ +V
Sbjct: 37 GKPRYKALVLVGKPGCGKTTVAKVLAEEMGWGVIELNASDIRN----EQKIKEIALRGAV 92
Query: 367 MADSRPKCLVIDEIDGA-LGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKG 425
DG + KG ++I+ +++ E V D+ K + +
Sbjct: 93 YETFTD--------DGEFISSKKGGRKLII-----FDEADNLYEGVKDGDRGGKKAIAET 139
Query: 426 CKKASLLRPVICICNDLY-------APALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNE 478
K +P+I I ND Y AL+SL + + + + +V LK IC E
Sbjct: 140 IKNTR--QPIILIGNDYYSLFSGTWGKALKSLAYVIRFKALTRAQIMKV---LKRICMAE 194
Query: 479 SMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIW 538
+K AL +A + D+R+ +N LQ L + K+IL D+G+ G +D+ +I+
Sbjct: 195 GIKCQDTALAYIAGRSGGDLRAAINDLQALAQGKKILTEDDLGA--TGYRDVKN---EIY 249
Query: 539 KEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVM 598
K T+ + ++ +N+ D+ V+F I EN + L+Y P
Sbjct: 250 KSTLVVLHTEHFWEAKNALTNLDETPDY------------VLF-WIEEN-MPLEYTKPED 295
Query: 599 LKTVKCLDCLGNSDLMHQYIMRTQQMPLYVY 629
L V+ + L +D+ + R QQ L+ Y
Sbjct: 296 L--VRAYEYLSRADVYLGRVKRRQQYALWAY 324
>gi|73669571|ref|YP_305586.1| replication factor C large subunit [Methanosarcina barkeri str.
Fusaro]
gi|110287808|sp|Q46AT6.1|RFCL_METBF RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|72396733|gb|AAZ71006.1| replication factor C large subunit [Methanosarcina barkeri str.
Fusaro]
Length = 642
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 121/264 (45%), Gaps = 42/264 (15%)
Query: 290 SNSKGIQ--DSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDD 347
N K +Q +W +K S G P+++ ++L GP G+GKT+ AH A+ + V+E+NASD
Sbjct: 21 GNKKAVQYLRTWAEKWLS-GIPDRRAVVLHGPAGVGKTSTAHALARDLDWEVIELNASDQ 79
Query: 348 RSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTA 407
R++ IE MN+ R +++DE D G +A+R A
Sbjct: 80 RTAGVIERVAGSAASMNTFFGGKR--LIILDEADNIHG-------------TADRGGMRA 124
Query: 408 KENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYA--PALRSLRQIAKVHVFIQPSVS 465
+ K + L+P++ I ND+Y P +R+L K F
Sbjct: 125 IAGIIK----------------NTLQPIVLIANDIYGLTPTIRNLCLEIK---FGSVQSR 165
Query: 466 RVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVV 525
+V LK +C +E + S A+ +AE D+RS +N LQ ++ L V D+ +
Sbjct: 166 SMVPALKKVCESEDILCSPDAIQQIAEGAGGDLRSAINDLQAAATGRKTLEVEDLSTS-- 223
Query: 526 GRKDMSRSAFDIWKEIFQKRKTKR 549
GR D+ + F + IF+ K+
Sbjct: 224 GR-DVKENIFKAMQRIFKSTDCKK 246
>gi|156065801|ref|XP_001598822.1| hypothetical protein SS1G_00911 [Sclerotinia sclerotiorum 1980]
gi|154691770|gb|EDN91508.1| hypothetical protein SS1G_00911 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1047
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 41/205 (20%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA--- 368
+ +++ GPPG+GKTT AH+AAK GY ++E NASD RS +E + +V+ SV+
Sbjct: 508 RAIIIHGPPGIGKTTAAHLAAKLAGYDILERNASDVRSKKLVETGLSEVLNNTSVLGYFA 567
Query: 369 ------DSRPK--CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
D K L++DE+DG +G V + K+
Sbjct: 568 GDGKNIDKTKKKIVLIMDEVDGMSSGDRGGVGALAKI----------------------- 604
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
CK P+I ICND P ++ + F +P+V V SR+ IC+ E +
Sbjct: 605 -----CKTTDT--PMILICNDRRLPKMKPFDFVTFDMPFKRPTVDMVRSRIATICHREGI 657
Query: 481 KTSSIALTTLAEYTECDIRSCLNTL 505
K + L E + DIR +N +
Sbjct: 658 KLPVQVIDALIEGSNNDIRQIINMI 682
>gi|341883312|gb|EGT39247.1| CBN-RFC-1 protein [Caenorhabditis brenneri]
Length = 842
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 150/362 (41%), Gaps = 84/362 (23%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV----- 366
K LL G PG+GKTT A++A + G +VE+NASD R+ +E KI ++ + +
Sbjct: 339 KAALLSGSPGVGKTTCAYMACQQLGLKLVEMNASDVRNKKHLEAKIGELTGSHQIEEFFG 398
Query: 367 MADSRPK-------CLVIDEIDGALG--DGKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
+ S P+ L++DE+DG G D G E+I + KE
Sbjct: 399 VKKSVPQDDSKVHHVLIMDEVDGMSGNQDRAGISELI---------------QIIKE--- 440
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
KI P+ICICND P +RSL F +P V + SR+ IC+
Sbjct: 441 SKI-------------PIICICNDRMHPKIRSLANYCYDLRFSKPRVETIRSRMMTICSQ 487
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
E +K S L L E + D+R + LQ K G++V +KD + FD
Sbjct: 488 EKVKISKEELDELIELSGHDVRQTIYNLQMRSKSS--------GAKVA-KKDQAWGPFDA 538
Query: 538 WKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQ--YHD 595
+ + R T + E F+ DY ++ + EN L ++ H
Sbjct: 539 ARRLLDSRTTLLEK----------QEMFFV--------DYGIMPLFVQENYLNMKNDKHT 580
Query: 596 P--VMLKTVKCLDCLGNSDLMHQYI-------MRTQQMPLYVYQPPLAITVHRLVSQIQK 646
P + K D + DL+ + I + +Q L P +A H L + IQ
Sbjct: 581 PQEAIRGMRKAADLISLGDLVDRQIRGGGSWKLLNEQSMLSAALPAMATGGH-LKAMIQF 639
Query: 647 PN 648
P+
Sbjct: 640 PS 641
>gi|303315067|ref|XP_003067541.1| BRCA1 C Terminus domain containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240107211|gb|EER25396.1| BRCA1 C Terminus domain containing protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 1068
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 101/239 (42%), Gaps = 54/239 (22%)
Query: 278 NFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGY 337
N+RN+ +++ KK G + +++ GPPG+GKTT AH+ AK Y
Sbjct: 498 NWRNNAKVDF-------------KKPGKDGSGTYRAVMIHGPPGIGKTTAAHLVAKLENY 544
Query: 338 HVVEVNASDDRSSSTIENKILDVVQMNS-----------VMADSRPKCLVIDEIDGALGD 386
VVE NASD RS +E+ + V+ S V ++ + L++DE+DG
Sbjct: 545 DVVETNASDTRSKRLLEDGLRGVLDTTSLQGYFSGEGKKVQSEKKNLVLIMDEVDGMSAG 604
Query: 387 GKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPA 446
+G V + + KK + P+I ICN+ P
Sbjct: 605 DRGGVGALAAV----------------------------AKKTRI--PMILICNERRLPK 634
Query: 447 LRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
+R + F +P+ ++ SRL IC E +K L L E T DIR +N L
Sbjct: 635 MRPFDHVTYELPFRRPTADQIRSRLATICFREGLKIPPQVLDGLIEGTHSDIRQIVNML 693
>gi|432846347|ref|XP_004065892.1| PREDICTED: replication factor C subunit 1-like [Oryzias latipes]
Length = 1152
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 164/408 (40%), Gaps = 95/408 (23%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIE---------NKILDVVQ 362
K LL GPPG+GKTT A + + G+ VE+NAS RS ++++ I D +
Sbjct: 650 KAALLSGPPGVGKTTTAALVCEELGFSYVEMNASCTRSKNSLKEVVSESLNNTSIEDFYK 709
Query: 363 MNSVMADSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKIS 421
S SR L++DE+DG G + +G ++ ++ ++ + KI
Sbjct: 710 GTSQTVSSR-HVLIMDEVDGMAGNEDRGGMQELIGLI-----------------RTSKI- 750
Query: 422 KKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMK 481
P+IC+CND P +RSL F +P V ++ + I E +K
Sbjct: 751 ------------PIICMCNDRNHPKIRSLSNYCFDLRFQRPRVEQIKGAMMSIAYKEGVK 798
Query: 482 TSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVV-GRKDMSRSAFDIWKE 540
AL + + D+R ++ L K +++ S RKDM FD+ ++
Sbjct: 799 IPPPALNEIILASNQDVRQVIHNLSMWSAKDKVMTYDQCKSDAARARKDMKLGPFDVCRK 858
Query: 541 IFQKRKTKRLRNSVSSSSNVSNEFD-FLHSLISNRGDYDVIFDGIHENILQ--------- 590
+F R + ++ ++ D F H DY + + EN +
Sbjct: 859 VF-------TRGEETDHMSLIDKSDLFFH-------DYSLAPLFVQENYVNVRPAAAGGD 904
Query: 591 LQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLE 650
++ H ++ KT D + + DL+ + I Q L P AI L ++ +
Sbjct: 905 MKSHLVLLSKTA---DSISDGDLVDRKIRSGQNWSLL---PTQAIYASVLPGELMR---- 954
Query: 651 WPKSYQRYRNAFMEKMDIFKSW---------HSKIPPYISRHLSTESL 689
+M +F SW HS+I +S H+S +++
Sbjct: 955 ----------GYMTHFPVFPSWLGKNSSTSKHSRIMQELSSHMSLKTM 992
>gi|32528306|ref|NP_002904.3| replication factor C subunit 1 isoform 1 [Homo sapiens]
gi|30354564|gb|AAH51751.1| Replication factor C (activator 1) 1, 145kDa [Homo sapiens]
gi|46430941|gb|AAS94325.1| replication factor C (activator 1) 1, 145kDa [Homo sapiens]
gi|119613330|gb|EAW92924.1| replication factor C (activator 1) 1, 145kDa, isoform CRA_c [Homo
sapiens]
gi|168275744|dbj|BAG10592.1| replication factor C subunit 1 [synthetic construct]
Length = 1147
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 143/363 (39%), Gaps = 102/363 (28%)
Query: 194 VHEQLWVDKYAPNSFTELLS---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRR 250
V LWVDKY P S ++ D+ ++L WL+ W +S+SE+ ++
Sbjct: 581 VENLLWVDKYKPTSLKTIIGQQGDQSCANKLLRWLRNWQ--------KSSSED-----KK 627
Query: 251 HSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPE 310
H+ + F+ K+ G+ +
Sbjct: 628 HAKFGK--------FSGKDDGSSF------------------------------------ 643
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-- 368
K LL GPPG+GKTT A + + GY VE+NASD RS S+++ + + + S+
Sbjct: 644 -KAALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKSSLKAIVAESLNNTSIKGFY 702
Query: 369 -------DSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
S L++DE+DG G + +G ++ ++ ++ + KI
Sbjct: 703 SNGAASSVSTKHALIMDEVDGMAGNEDRGGIQELIGLI-----------------KHTKI 745
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
P+IC+CND P +RSL F +P V ++ + I E +
Sbjct: 746 -------------PIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAMMSIAFKEGL 792
Query: 481 KTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV-VGRKDMSRSAFDIWK 539
K A+ + DIR L+ L + + L + +KD+ FD+ +
Sbjct: 793 KIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRAKKDIKMGPFDVAR 852
Query: 540 EIF 542
++F
Sbjct: 853 KVF 855
>gi|119190369|ref|XP_001245791.1| hypothetical protein CIMG_05232 [Coccidioides immitis RS]
gi|392868674|gb|EAS34462.2| chromosome transmission fidelity factor [Coccidioides immitis RS]
Length = 1068
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 101/239 (42%), Gaps = 54/239 (22%)
Query: 278 NFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGY 337
N+RN+ +++ KK G + +++ GPPG+GKTT AH+ AK Y
Sbjct: 498 NWRNNAKVDF-------------KKPGKDGSGTYRAVMIHGPPGIGKTTAAHLVAKLENY 544
Query: 338 HVVEVNASDDRSSSTIENKILDVVQMNS-----------VMADSRPKCLVIDEIDGALGD 386
VVE NASD RS +E+ + V+ S V ++ + L++DE+DG
Sbjct: 545 DVVETNASDTRSKRLLEDGLRGVLDTTSLQGYFSGEGKKVQSEKKNLVLIMDEVDGMSAG 604
Query: 387 GKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPA 446
+G V + + KK + P+I ICN+ P
Sbjct: 605 DRGGVGALAAV----------------------------AKKTRI--PMILICNERRLPK 634
Query: 447 LRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
+R + F +P+ ++ SRL IC E +K L L E T DIR +N L
Sbjct: 635 MRPFDHVTYELPFRRPTADQIRSRLATICFREGLKIPPQVLDGLIEGTHSDIRQIVNML 693
>gi|410254314|gb|JAA15124.1| replication factor C (activator 1) 1, 145kDa [Pan troglodytes]
gi|410297908|gb|JAA27554.1| replication factor C (activator 1) 1, 145kDa [Pan troglodytes]
gi|410338041|gb|JAA37967.1| replication factor C (activator 1) 1, 145kDa [Pan troglodytes]
Length = 1147
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 143/363 (39%), Gaps = 102/363 (28%)
Query: 194 VHEQLWVDKYAPNSFTELLS---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRR 250
V LWVDKY P S ++ D+ ++L WL+ W +S+SE+ ++
Sbjct: 581 VENLLWVDKYKPTSLKTIIGQQGDQSCANKLLRWLRNWQ--------KSSSED-----KK 627
Query: 251 HSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPE 310
H+ + F+ K+ G+ +
Sbjct: 628 HAKFGK--------FSGKDDGSSF------------------------------------ 643
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-- 368
K LL GPPG+GKTT A + + GY VE+NASD RS S+++ + + + S+
Sbjct: 644 -KAALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKSSLKAIVAESLNNTSIKGFY 702
Query: 369 -------DSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
S L++DE+DG G + +G ++ ++ ++ + KI
Sbjct: 703 SNGAASSVSTKHALIMDEVDGMAGNEDRGGIQELIGLI-----------------KHTKI 745
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
P+IC+CND P +RSL F +P V ++ + I E +
Sbjct: 746 -------------PIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAMMSIAFKEGL 792
Query: 481 KTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV-VGRKDMSRSAFDIWK 539
K A+ + DIR L+ L + + L + +KD+ FD+ +
Sbjct: 793 KIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRAKKDIKMGPFDVAR 852
Query: 540 EIF 542
++F
Sbjct: 853 KVF 855
>gi|354504965|ref|XP_003514543.1| PREDICTED: replication factor C subunit 1-like [Cricetulus griseus]
Length = 1276
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 154/390 (39%), Gaps = 106/390 (27%)
Query: 167 VEQEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLS---DEQTNREVLL 223
EQ K N+ ++G + S K V LWVDKY P S ++ D+ ++L
Sbjct: 687 TEQVVKEKPGNNRAQGPAKNSSGNK--VESLLWVDKYKPTSLKNIIGQQGDQSCANKLLR 744
Query: 224 WLKQWDSCVFGSEIRSTSEEVLSALR--RHSTISQNKKQNDSSFTRKNRGNRWSNGNFRN 281
WL+ W +S+ EE A R +HS+ K + SSF
Sbjct: 745 WLRNWH--------KSSPEEKKHAARFSKHSS-----KDDGSSF---------------- 775
Query: 282 SNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVE 341
K LL GPPG+GKTT A + + GY VE
Sbjct: 776 ------------------------------KAALLSGPPGVGKTTTASLVCQELGYSYVE 805
Query: 342 VNASDDRSSSTIENKILDVVQMNSV------MADSRPKCLVIDEIDGALG-DGKGAVEVI 394
+NASD RS ++++ + + + S+ A L++DE+DG G + +G ++ +
Sbjct: 806 LNASDTRSKNSLKTIVAESLDNTSIKGFYTRRATPSKHALIMDEVDGMAGNEDRGGIQEL 865
Query: 395 LKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIA 454
+ ++ + KI P+IC+CND P +RSL
Sbjct: 866 IGLI-----------------KHTKI-------------PIICMCNDRNHPKIRSLVHYC 895
Query: 455 KVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEI 514
F +P V ++ S + I E +K A+ + D+R L+ + + +
Sbjct: 896 FDLRFQRPRVEQIKSAMLSIAFKEGLKIPPPAMNEIILGANQDVRQVLHNMSMWCAQSKA 955
Query: 515 LNV--MDIGSQVVGRKDMSRSAFDIWKEIF 542
L SQ +KD+ FD+ +++F
Sbjct: 956 LTYDQAKADSQRA-KKDIRLGPFDVARKVF 984
>gi|50292909|ref|XP_448887.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528200|emb|CAG61857.1| unnamed protein product [Candida glabrata]
Length = 854
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 99/418 (23%), Positives = 163/418 (38%), Gaps = 77/418 (18%)
Query: 242 EEVLSALRRHSTISQNKKQNDSSFTRKNRGNR-----WS-----------NGNFRNSNNL 285
EE + R +++ KKQN +S T R W+ GN + N L
Sbjct: 261 EEKQKKMAREREMAKLKKQNPNSITTTREPVREQDKLWTVKYAPTSLQQVCGNKTSVNKL 320
Query: 286 EYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNAS 345
+ SN + + + K G + +L GPPG+GKTT AH+ AK GY V+E NAS
Sbjct: 321 KTWLSNWEANKSNGFKTPGRDGTGIYRAAMLYGPPGIGKTTAAHLVAKELGYDVLEQNAS 380
Query: 346 DDRSSSTIENKILDVVQMNSVMA----------DSRPKCLVIDEIDGALGDGKGAVEVIL 395
D RS S + + + + S++ + +V+DE+DG G +G V +
Sbjct: 381 DVRSKSLLNGGVKNALDNFSIVGLLQNDKTANSNGTKFVIVMDEVDGMSGGDRGGVGQLA 440
Query: 396 KMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAK 455
+ C+K S P+I ICN+ P +R ++
Sbjct: 441 QF----------------------------CRKTST--PLILICNERTLPKMRPFDRVCL 470
Query: 456 VHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEIL 515
F +P + + +RL I E K + L + T DIR +N L + K + +
Sbjct: 471 DIQFRRPDANSIKARLMTIAVREKFKLDPNVIDKLVQATRGDIRQIINLLSTVSKTSKTI 530
Query: 516 NVMDIGS-QVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNR 574
N +I K+++ FDI RL + + S F ++
Sbjct: 531 NHENISEISAAWEKNIALKPFDI---------AHRLLDGSIYTELGSQRFSLNDKIMLYF 581
Query: 575 GDYDVIFDGIHENILQLQYHDPVMLK--------TVKCLDCLGNSDLMHQYIMRTQQM 624
D+D I EN + + P +LK + + DL+ + I ++Q+
Sbjct: 582 DDFDFAPLMIQENYIHTR---PSVLKPGQSHLQAVADAAESISQGDLVERKIRSSEQL 636
>gi|320035705|gb|EFW17646.1| chromosome transmission fidelity factor [Coccidioides posadasii
str. Silveira]
Length = 1045
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 101/239 (42%), Gaps = 54/239 (22%)
Query: 278 NFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGY 337
N+RN+ +++ KK G + +++ GPPG+GKTT AH+ AK Y
Sbjct: 475 NWRNNAKVDF-------------KKPGKDGSGTYRAVMIHGPPGIGKTTAAHLVAKLENY 521
Query: 338 HVVEVNASDDRSSSTIENKILDVVQMNS-----------VMADSRPKCLVIDEIDGALGD 386
VVE NASD RS +E+ + V+ S V ++ + L++DE+DG
Sbjct: 522 DVVETNASDTRSKRLLEDGLRGVLDTTSLQGYFSGEGKKVQSEKKNLVLIMDEVDGMSAG 581
Query: 387 GKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPA 446
+G V + + KK + P+I ICN+ P
Sbjct: 582 DRGGVGALAAV----------------------------AKKTRI--PMILICNERRLPK 611
Query: 447 LRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
+R + F +P+ ++ SRL IC E +K L L E T DIR +N L
Sbjct: 612 MRPFDHVTYELPFRRPTADQIRSRLATICFREGLKIPPQVLDGLIEGTHSDIRQIVNML 670
>gi|255724588|ref|XP_002547223.1| activator 1 95 kDa subunit [Candida tropicalis MYA-3404]
gi|240135114|gb|EER34668.1| activator 1 95 kDa subunit [Candida tropicalis MYA-3404]
Length = 695
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 109/246 (44%), Gaps = 54/246 (21%)
Query: 283 NNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEV 342
N Y+ KG DS P + +L+ GPPG+GKT+ AH+ AK GY V+E
Sbjct: 176 NWFTYQARGFKGPSDS---------PSAFRAMLISGPPGIGKTSAAHLVAKSLGYDVLER 226
Query: 343 NASDDRSSSTIENKILDVVQMNSVMA------------DSRPKCLVIDEIDG-ALGDGKG 389
NASD RS S + + ++ SV+ S+ C+++DE+DG + GD G
Sbjct: 227 NASDVRSKSLLNANVKSILNNTSVVGFFKNRDDKEQQNTSKKFCIIMDEVDGMSSGDHGG 286
Query: 390 AVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRS 449
A + Q KI+K P+I ICND P +R+
Sbjct: 287 AGAL---------------------SQFCKITK----------MPMILICNDKSLPKMRT 315
Query: 450 LRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLD 509
++ F +PS + V SRL I E +K + L + T DIR +N L +
Sbjct: 316 FDRVTYDLPFRRPSENEVKSRLMTIAFREKIKLDPNVIGQLVQATSNDIRQMINLLSTVS 375
Query: 510 K-KKEI 514
K +KEI
Sbjct: 376 KTQKEI 381
>gi|225563290|gb|EEH11569.1| chromosome transmission fidelity factor [Ajellomyces capsulatus
G186AR]
Length = 1071
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 93/216 (43%), Gaps = 41/216 (18%)
Query: 301 KKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENK---I 357
KK G + +++ GPPG+GKTT AH+ AK Y VVE NASD RS S +E +
Sbjct: 513 KKGGKDGTGIYRAVMIHGPPGIGKTTAAHLVAKLENYDVVESNASDTRSKSLVETGLRGV 572
Query: 358 LDVVQMNSVMADSRPKC--------LVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKE 409
LD + + K L++DE+DG +G V + +
Sbjct: 573 LDTTSLQGYFSGEGKKVESGKKNLVLIMDEVDGMSAGDRGGVGALAAV------------ 620
Query: 410 NVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVS 469
KK + P+I ICN+ P +R + F +P+V ++ +
Sbjct: 621 ----------------AKKTRI--PMILICNERRLPKMRPFDSVTFDLPFRRPTVEQIRA 662
Query: 470 RLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
RL IC E +K L +L + T DIR +N L
Sbjct: 663 RLSTICYREGLKIPPQVLDSLIQGTHADIRQVINML 698
>gi|71027899|ref|XP_763593.1| replication factor C large subunit [Theileria parva strain Muguga]
gi|68350546|gb|EAN31310.1| replication factor C large subunit, putative [Theileria parva]
Length = 1084
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 113/266 (42%), Gaps = 63/266 (23%)
Query: 307 GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIEN---KILDVVQM 363
G E K LL GPPG+GKTT A + + YHV+E+NASD RS ++IEN + + +
Sbjct: 536 GKDEFKAALLSGPPGIGKTTCAKLVGQFFNYHVIELNASDQRSKNSIENIFPLVTGTLTL 595
Query: 364 NSVMADSR---------------------PKCLVIDEIDGALGDGKGAVEVILKMVSAER 402
N++ + S L++DE+DG KG ++ I +++ +
Sbjct: 596 NTIYSASSITNNTSFKNKNNNSNVNGLNAKTLLILDEVDGMSSGDKGGIQAISELIDITK 655
Query: 403 KSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQP 462
C P+I ICND ++ + +L F P
Sbjct: 656 -----------------------C-------PIILICNDRFSQKMSTLSNKCLDLRFNPP 685
Query: 463 SVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGS 522
+ ++R+ IC E++K + L L + D+R LN LQF + I +
Sbjct: 686 PIDLYINRINKICKLENIKVTENLLLELYHKSSGDLRYTLNYLQFYNSNTNI-------T 738
Query: 523 QVVGRKDMS--RSAFDIWKEIFQKRK 546
+ +KD S ++ FD ++F K
Sbjct: 739 PCINKKDESHFQNLFDNCNKVFHLSK 764
>gi|390366385|ref|XP_797949.2| PREDICTED: replication factor C subunit 1-like [Strongylocentrotus
purpuratus]
Length = 671
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 143/351 (40%), Gaps = 79/351 (22%)
Query: 259 KQNDSSFTRK--NRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLL 316
+Q D S +K N RW++ N+ NN E N R G + LL
Sbjct: 149 QQGDKSNAKKLLNWLRRWNDNNY--GNNKEKAKFN------------RDAGFAF-RAALL 193
Query: 317 CGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPK--- 373
GPPG+GKTT A + + G+ +E NASD R +++ I + + N +AD K
Sbjct: 194 SGPPGVGKTTTATLVCQELGFSFIEQNASDSRGKKSLQGGIAESLD-NQSIADMFKKGCG 252
Query: 374 ----------CLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISK 422
CL++DE+DG G + +G ++ +++M+ R
Sbjct: 253 KKTSEEGHKHCLIMDEVDGVAGNEDRGGIQELIQMIKTTRT------------------- 293
Query: 423 KKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKT 482
P+ICICND P +RSL F +P V ++ S + I E +
Sbjct: 294 -----------PIICICNDRSHPKIRSLVNYCFDLRFQRPRVPQIKSAMMSIAYKEGLTV 342
Query: 483 SSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVV-GRKDMSRSAFDIWKEI 541
AL + D+R L+ L ++ +N + + +KD+ +D+ +++
Sbjct: 343 PPAALDGMIMAANQDVRQVLHNLSMWSAGQKKMNAEQMNTDARNAKKDLKLGPWDVARQV 402
Query: 542 FQKRKTKRLRNSVSSSSNVSNEFD-FLHSLISNRGDYDVIFDGIHENILQL 591
F + K + + +++ D F H DY + + EN L +
Sbjct: 403 FSSKDLKTM--------SFNDKMDLFFH-------DYSIAGLFVQENYLHV 438
>gi|328863808|gb|EGG12907.1| hypothetical protein MELLADRAFT_46497 [Melampsora larici-populina
98AG31]
Length = 937
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 95/201 (47%), Gaps = 37/201 (18%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDV---VQMNSVMA 368
+ ++L GPPG+GKTT AH+ +K GY V+E+NAS+ RS +E D+ V + +
Sbjct: 399 RCIVLSGPPGVGKTTTAHLVSKLEGYDVIEMNASNTRSKKLLEVGCKDITGNVGIGGFLE 458
Query: 369 DSRPK----CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKK 424
S PK L++DE+DG +G V + ++ RK+
Sbjct: 459 SSEPKNEKLVLIMDEVDGMSAGDRGGVGALNSLI---RKTQI------------------ 497
Query: 425 GCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSS 484
P+I I ND+ P ++ L+ VF +P + + SR+ I E +K +
Sbjct: 498 ---------PIIAIANDMSIPKMKPLKSTTHSLVFRRPDANAIRSRIMCIAFREKLKVPA 548
Query: 485 IALTTLAEYTECDIRSCLNTL 505
IA+ L ++ DIR +N L
Sbjct: 549 IAIDQLVMGSQSDIRQIINML 569
>gi|71018701|ref|XP_759581.1| hypothetical protein UM03434.1 [Ustilago maydis 521]
gi|46099339|gb|EAK84572.1| hypothetical protein UM03434.1 [Ustilago maydis 521]
Length = 950
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 98/233 (42%), Gaps = 50/233 (21%)
Query: 293 KGIQDSWHKKTRSTGPPEQKV---LLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRS 349
K DS+ + GP V +L+ GPPG+GKTT AH+ AK GY +E NASD RS
Sbjct: 412 KAWPDSYRSNFKKPGPTGMNVYRAVLISGPPGIGKTTSAHLVAKMEGYSPLEFNASDARS 471
Query: 350 SS--------TIENKILD----VVQMNSVMADSRPK-----CLVIDEIDGALGDGKGAVE 392
TI NK LD V S + P+ L++DE+DG G +G V
Sbjct: 472 KKLVEGMLQDTINNKSLDSWYSSVAKPSSWSAGLPRIHDRTVLIMDEVDGMSGGDRGGVG 531
Query: 393 VILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQ 452
I ++ KK + P+ICICND +R
Sbjct: 532 AINALI----------------------------KKTKV--PIICICNDRRNQKMRPFEH 561
Query: 453 IAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
F +P ++V SR+ I E +K + L E + DIRS +N L
Sbjct: 562 TTFNLTFRKPDANQVKSRMLSIAFKEKLKIPGEVMAQLIEAAQSDIRSVINML 614
>gi|388582052|gb|EIM22358.1| DNA replication factor C, large subunit [Wallemia sebi CBS 633.66]
Length = 753
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 41/206 (19%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKI-LDVVQMNSVMAD 369
+K LL+ G PG+GKTT AH+AAK GY +E+NASD RS IE+ +D +++ +
Sbjct: 222 KKALLVHGAPGIGKTTAAHLAAKSAGYSPLELNASDVRSKKLIESTTNIDNTSIDTFFGN 281
Query: 370 ----------SRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEK 419
+ CL+ DE DG +G + + ++ R
Sbjct: 282 NNNDAINTNVTHSTCLIFDECDGMSAGDRGGIGAMNALIKKTR----------------- 324
Query: 420 ISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNES 479
P+ICICND P +R + +F +P S++ SR+ I + E
Sbjct: 325 -------------IPIICICNDKSNPKMRPFQNTCGDILFRRPEASQIRSRIMSILHKEK 371
Query: 480 MKTSSIALTTLAEYTECDIRSCLNTL 505
MK S + L ++ DIR +N +
Sbjct: 372 MKLDSNVVDQLISGSQSDIRQVINMI 397
>gi|429216859|ref|YP_007174849.1| AAA ATPase [Caldisphaera lagunensis DSM 15908]
gi|429133388|gb|AFZ70400.1| AAA ATPase [Caldisphaera lagunensis DSM 15908]
Length = 473
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 106/428 (24%), Positives = 190/428 (44%), Gaps = 84/428 (19%)
Query: 298 SWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKI 357
SW + R PE+K LLL GPPG+GKT+L A ++E+NASD R + I+ +
Sbjct: 39 SWLEGKR----PEKKALLLYGPPGVGKTSLVEAIANEYDLELLELNASDYRRTQDIKKTV 94
Query: 358 LDVVQMNSVMADSRPKCLVIDEIDGALGDGK-GAVEVILKMVSAERKSNTAKENVAKEDQ 416
+ Q + + +++DEIDG G G V+ ++K++ NT
Sbjct: 95 ANASQKRPLF--KKMILILMDEIDGLSPRGDIGGVDELIKII-----PNT---------- 137
Query: 417 PEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICN 476
+ P+I ND + LR +R+ + F ++++V+S L+ ICN
Sbjct: 138 ---------------MNPIILTANDPWKDNLRPIREYVSMVEFKPLTLNQVISVLQGICN 182
Query: 477 NESMKTSSIALTTLAEYTECDIRSCLNTLQFLDK--KKEILNVMDIGSQVVGRKDMSRSA 534
E+++ AL +AE + D+R +N L+ + + K N++ + +V +D S
Sbjct: 183 KENLECEREALKFIAEKSMGDLRGAINDLEAVAEGYGKVTFNLVSV---IVKGRDKS--- 236
Query: 535 FDIWKE---IFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQL 591
D+W+ +F ++ + R SV +S DY+ + ++N+ L
Sbjct: 237 VDLWRTLNGVFYAKEAWQSRRSVMNSEE----------------DYETLIAWFNDNV-PL 279
Query: 592 QYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQ----MPLYVYQ--PPLAITVHRLVSQIQ 645
+Y D L + +D L + L ++ R + M YV+ P IT R +I
Sbjct: 280 KYGDYEDL--FRAMDSLSRASL---FLKRAKSGDWDMLSYVFDLIGP-GITYARKNGEIL 333
Query: 646 KPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYIS-RHLSTESLVE-DSISPLLHILSP 703
K +P+ + M +M + +I +S R LS++ +++ D I L+ I
Sbjct: 334 KNRFSYPQKIK-----IMGQMKSLRETRDRIAKILSERTLSSQRVIKSDVIQYLITIFRN 388
Query: 704 PTLRPVAL 711
+ VA+
Sbjct: 389 GNIERVAM 396
>gi|387018040|gb|AFJ51138.1| Replication factor C subunit 1-like [Crotalus adamanteus]
Length = 1132
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 117/567 (20%), Positives = 205/567 (36%), Gaps = 154/567 (27%)
Query: 198 LWVDKYAPNSFTELL---SDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTI 254
LWVDKY P S ++ S++ +++L WLK W
Sbjct: 576 LWVDKYKPTSIKAIIGQQSEQSCAQKLLRWLKNW----------------------QKNS 613
Query: 255 SQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVL 314
S++++ F RK+ G + K
Sbjct: 614 SEDQQVKSGKFGRKDDG-------------------------------------AQSKAA 636
Query: 315 LLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA------ 368
LL G PG+GKTT A + + G VE+NASD RS ++++ + + + S+
Sbjct: 637 LLSGAPGVGKTTTASLVCEELGLSYVELNASDTRSKNSLKEVVAESLNNTSIKGFCSGTS 696
Query: 369 --DSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKG 425
S L++DE+DG G + +G ++ ++ ++ +
Sbjct: 697 RSVSAKHVLIMDEVDGMAGNEDRGGIQELIDLIKHTK----------------------- 733
Query: 426 CKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSI 485
P+IC+CND P +RSL F +P V ++ + I E +K
Sbjct: 734 -------VPIICMCNDRNHPKIRSLAHYCFDLRFPRPRVEQIKGAMMSIAFKEGLKIPPP 786
Query: 486 ALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVV-GRKDMSRSAFDIWKEIFQK 544
A++ L DIR L+ L + + L + +KD+ FD+ +++F K
Sbjct: 787 AMSELILAANQDIRQVLHNLSLWCARDKTLTYDGVKEDAGKAKKDIKLGPFDVVRKVFAK 846
Query: 545 RKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQ--------YHDP 596
+ S S + F H DY + + EN + ++ +
Sbjct: 847 AE------EASHMSLIDKADLFFH-------DYSLGPLFVQENYVHVKPAAAGNNVAKEL 893
Query: 597 VMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQ 656
++L K D + + DL+ + I Q L P AI L ++ +
Sbjct: 894 ILLS--KTADSICDGDLVDRQIRTRQNWSLL---PTQAIYSSVLPGELMR---------- 938
Query: 657 RYRNAFMEKMDIFKSW---------HSKIPPYISRHLSTESLVEDSISPLLHILSPPTLR 707
+M++ F SW H +I +SRH+S + L ++ LR
Sbjct: 939 ----GYMQEFPSFPSWLGKFSSTGKHDRIVQELSRHMSLRTHASKRAINLDYL---SYLR 991
Query: 708 PVALHLLSAKEKNDLAQLVSAMVSYSL 734
+ L+ + + V+ M SY L
Sbjct: 992 DAVVRPLTCQGTEGVRDAVAFMDSYCL 1018
>gi|326919292|ref|XP_003205915.1| PREDICTED: replication factor C subunit 1-like [Meleagris gallopavo]
Length = 1212
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 126/563 (22%), Positives = 216/563 (38%), Gaps = 128/563 (22%)
Query: 202 KYAPNSFTELLSDEQTNR-EVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQ 260
K AP S L+S+ N+ E LLW+ ++ + I E+ +
Sbjct: 626 KEAPKSKGTLVSESSENKTETLLWVDKYKPASLKAIIGQQGEQSCA-------------- 671
Query: 261 NDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPP 320
N+ RW +RN++ +N G +D K LL GPP
Sbjct: 672 --------NKLLRWLRSWYRNTSEDGQAKTNKSGGKDDGS---------SFKAALLSGPP 714
Query: 321 GLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA--------DSRP 372
G+GKTT A + K GY VE+NASD RS ++++ + + + S+ S
Sbjct: 715 GVGKTTTASLVCKELGYSYVELNASDTRSKNSLKEVVAESLNNTSIKGFCSGTSSSVSGK 774
Query: 373 KCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASL 431
L++DE+DG G + +G ++ ++ ++ + KI
Sbjct: 775 HVLIMDEVDGMAGNEDRGGIQELIGLI-----------------KHTKI----------- 806
Query: 432 LRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLA 491
P+IC+CND P +RSL F +P + ++ + I E +K A+ +
Sbjct: 807 --PIICMCNDRNHPKIRSLVHYCFDLRFQRPRLEQIKGAMMSIAFKEGLKIPPPAMNEII 864
Query: 492 EYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGR--KDMSRSAFDIWKEIFQKRKTKR 549
DIR L+ L K + L D GR KD+ FD+ +++F +
Sbjct: 865 LAANQDIRQVLHNLNMWCAKDKSL-TYDEAKTDAGRAKKDIKLGPFDVVRKVFAAGEEAS 923
Query: 550 LRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQ---------LQYHDPVMLK 600
R S+ S++ F H DY + + EN + L+ H +ML
Sbjct: 924 -RMSLIDKSDL-----FFH-------DYSLAPLFVQENYVHVKPAAAGGDLKKH--LMLL 968
Query: 601 TVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRN 660
+ + D + + DL+ + I Q L P AI L ++ +
Sbjct: 969 S-RAADSICDGDLVDKQIRTKQNWNLL---PTQAIYSSVLPGELMR-------------- 1010
Query: 661 AFMEKMDIFKSW---------HSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVAL 711
+M + +F SW H +I ++ H+ SL + +++ LR +
Sbjct: 1011 GYMSQFPVFPSWLGKFSSTGKHERIIQELAMHM---SLRTQACKRTVNMEYLSHLRDALI 1067
Query: 712 HLLSAKEKNDLAQLVSAMVSYSL 734
L A + + ++ M SY L
Sbjct: 1068 QPLKAFGADGVQDAIAFMDSYCL 1090
>gi|336122357|ref|YP_004577132.1| Replication factor C large subunit [Methanothermococcus okinawensis
IH1]
gi|334856878|gb|AEH07354.1| Replication factor C large subunit [Methanothermococcus okinawensis
IH1]
Length = 514
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 150/328 (45%), Gaps = 56/328 (17%)
Query: 307 GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV 366
G P + VLL+ GPPG GKTTLA+ A G+ ++E+NASD R+ I+ +++ ++
Sbjct: 35 GKPVKPVLLV-GPPGCGKTTLANALANDYGFEIIELNASDKRNKDVIK-QVVGSASVSKS 92
Query: 367 MADSRPKCLVIDEIDGALGDG-KGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKG 425
++ R +++DE+DG G+ +G V ILK++ TAK
Sbjct: 93 LSGKRA-LIILDEVDGISGNSDRGGVSEILKIIK------TAK----------------- 128
Query: 426 CKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSI 485
P+I ND+Y P+L SLR K+ + +V L+ I E
Sbjct: 129 -------NPIILTANDIYKPSLMSLRNACKIVKIGSVHTNSIVPVLRRIALKEGFNVDDS 181
Query: 486 ALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKR 545
L +A++ D+R+ +N L+ L + LN+ ++ + + +D+ ++ FD + IF
Sbjct: 182 VLKIIAKHAGGDVRAAINDLESLALGND-LNLEEV--KELPDRDVEKNIFDAIRIIF--- 235
Query: 546 KTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCL 605
KT +VSS +V + D + + I ENI + +Y + V+
Sbjct: 236 KTTHYDIAVSSVYDV-------------KEDIGTVEEWIAENIPR-EYKKKEDI--VRAY 279
Query: 606 DCLGNSDLMHQYIMRTQQMPLYVYQPPL 633
D L +D+ + + Q L+ Y L
Sbjct: 280 DYLSKADIFLGRVYKRQYYGLWRYASAL 307
>gi|383410567|gb|AFH28497.1| replication factor C subunit 1 isoform 1 [Macaca mulatta]
Length = 1147
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 143/363 (39%), Gaps = 102/363 (28%)
Query: 194 VHEQLWVDKYAPNSFTELLS---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRR 250
V LWVDKY P S ++ D+ ++L WL+ W +S+SE+ ++
Sbjct: 581 VENLLWVDKYKPTSLKTIIGQQGDQSCANKLLRWLRNWH--------KSSSED-----KK 627
Query: 251 HSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPE 310
H+ + F+ K+ G+ +
Sbjct: 628 HAKFGK--------FSGKDDGSSF------------------------------------ 643
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-- 368
K LL GPPG+GKTT A + + GY VE+NASD RS S+++ + + + S+
Sbjct: 644 -KAALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKSSLKAIVAESLSNTSIKGFY 702
Query: 369 -------DSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
S L++DE+DG G + +G ++ ++ ++ + KI
Sbjct: 703 SNGAASSVSTKHALIMDEVDGMAGNEDRGGIQELIGLI-----------------KHTKI 745
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
P+IC+CND P +RSL F +P V ++ + I E +
Sbjct: 746 -------------PIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAMMSIAFKEGL 792
Query: 481 KTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV-VGRKDMSRSAFDIWK 539
K A+ + DIR L+ L + + L + +KD+ FD+ +
Sbjct: 793 KIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRAKKDIKMGPFDVAR 852
Query: 540 EIF 542
++F
Sbjct: 853 KVF 855
>gi|323456558|gb|EGB12425.1| hypothetical protein AURANDRAFT_20224 [Aureococcus anophagefferens]
Length = 690
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 123/322 (38%), Gaps = 102/322 (31%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LW D++ P S ++L + +++ LWL W+ G E
Sbjct: 122 LWADRHKPKSQKDILGNGDVCKKLGLWLDDWEKVHLGDE--------------------- 160
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
KK+ +F ++N P K LL
Sbjct: 161 KKRKKPAFAKEN---------------------------------------PGAKAALLS 181
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILD-----VVQMNSVMADSRP 372
GPPG+GK+++A + G+ VVE+NASD RS+ T+E + D VV + + P
Sbjct: 182 GPPGIGKSSMAALLCAARGFDVVELNASDTRSARTVEETLGDALGCQVVSSSFAKKGAAP 241
Query: 373 -------KCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKG 425
+ +++DEIDG G +G + ++K++ + S+T
Sbjct: 242 PSKKRLRRVVIMDEIDGLSGSDRGGSQALVKLI---KSSST------------------- 279
Query: 426 CKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSI 485
P+ICICND + +++L F +P + R+ I E +
Sbjct: 280 --------PIICICNDRQSAKVKTLANHCFDLRFKRPMKVTIAKRVMAIAMKEGLTIEQN 331
Query: 486 ALTTLAEYTECDIRSCLNTLQF 507
A L E DIR CLN LQ
Sbjct: 332 AAELLVESCGNDIRQCLNALQM 353
>gi|195152678|ref|XP_002017263.1| GL21622 [Drosophila persimilis]
gi|194112320|gb|EDW34363.1| GL21622 [Drosophila persimilis]
Length = 979
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 141/321 (43%), Gaps = 59/321 (18%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV----- 366
K LL GPPG+GKTT A + K G+ VE NASD RS +++++ ++ S+
Sbjct: 490 KAALLSGPPGIGKTTTATLVVKELGFDAVEFNASDTRSKRLLKDEVSTLLGNKSLYGYVN 549
Query: 367 ---MADSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISK 422
A S+ L++DE+DG G + +G ++ ++ ++
Sbjct: 550 GQSQAVSKKHVLIMDEVDGMAGNEDRGGMQELIALI------------------------ 585
Query: 423 KKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKT 482
K +S+ P+IC+CND P +RSL F +P + ++ ++ IC E +K
Sbjct: 586 ----KDSSV--PIICMCNDRNHPKIRSLVNYCFDLRFQRPRLEQIKGKIMSICFKEKVKI 639
Query: 483 SSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV-VGRKDMSRSAFDIWKEI 541
S + + T DIR +N + + ++I ++ KD+ +++ +++
Sbjct: 640 SPAKVEEIIAATNNDIRQSINHISLMSAGEDIPTQSQAKVELKTASKDLKLGPWEVVRKV 699
Query: 542 FQKRKTKRLRNSVSSSSNVSNEFD-FLHSLISNRGDYDVIFDGIHENILQLQYHD---PV 597
F + KR+ + +++ D F H DY + + +N LQ+ +
Sbjct: 700 FTAEEHKRM--------SFADKCDLFFH-------DYSLAPLFVQQNYLQVTPQGNKKDI 744
Query: 598 MLKTVKCLDCLGNSDLMHQYI 618
+ K D L D++ + I
Sbjct: 745 LGKVAATADALSIGDMIDKRI 765
>gi|229582087|ref|YP_002840486.1| replication factor C large subunit [Sulfolobus islandicus
Y.N.15.51]
gi|259585461|sp|C3NHF4.1|RFCL_SULIN RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|228012803|gb|ACP48564.1| AAA ATPase central domain protein [Sulfolobus islandicus Y.N.15.51]
Length = 405
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 124/283 (43%), Gaps = 49/283 (17%)
Query: 307 GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV 366
G P K +LL GPPG+GKTTLA A ++E+NASD R I+ + + +
Sbjct: 36 GKPNAKAVLLHGPPGVGKTTLAEAVAHDYNLELLEMNASDSRKLQDIKG-VAEKASVYGS 94
Query: 367 MADSRPKCLVIDEIDGA-LGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKG 425
+ +R K +++DE+DG + + GA++ IL+++ +
Sbjct: 95 IFGTRGKLILLDEVDGINVREDTGAIQGILELIEKTK----------------------- 131
Query: 426 CKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSI 485
P+I ND + PALR LR K+ + + LK IC E +
Sbjct: 132 -------YPIIMTANDPWNPALRELRNKTKMVGLNKLGKYPLRRLLKKICQAEKIICDDE 184
Query: 486 ALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKR 545
AL + + +E D R +N LQ + + + +D+ + RK+ F+ ++IF R
Sbjct: 185 ALNYIIDTSEGDTRYAINMLQGIGEGYGKV-TLDLVEAMARRKERELDPFETLRDIFWAR 243
Query: 546 KTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENI 588
+ +N+ +S+ + DYD++ I ENI
Sbjct: 244 YAWQAKNAATSA----------------QIDYDMLIRWISENI 270
>gi|380815320|gb|AFE79534.1| replication factor C subunit 1 isoform 1 [Macaca mulatta]
Length = 1147
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 143/363 (39%), Gaps = 102/363 (28%)
Query: 194 VHEQLWVDKYAPNSFTELLS---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRR 250
V LWVDKY P S ++ D+ ++L WL+ W +S+SE+ ++
Sbjct: 581 VENLLWVDKYKPTSLKTIIGQQGDQSCANKLLRWLRNWH--------KSSSED-----KK 627
Query: 251 HSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPE 310
H+ + F+ K+ G+ +
Sbjct: 628 HAKFGK--------FSGKDDGSSF------------------------------------ 643
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-- 368
K LL GPPG+GKTT A + + GY VE+NASD RS S+++ + + + S+
Sbjct: 644 -KAALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKSSLKAIVAESLSNTSIKGFY 702
Query: 369 -------DSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
S L++DE+DG G + +G ++ ++ ++ + KI
Sbjct: 703 SNGAASSVSTKHALIMDEVDGMAGNEDRGGIQELIGLI-----------------KHTKI 745
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
P+IC+CND P +RSL F +P V ++ + I E +
Sbjct: 746 -------------PIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAMMSIAFKEGL 792
Query: 481 KTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV-VGRKDMSRSAFDIWK 539
K A+ + DIR L+ L + + L + +KD+ FD+ +
Sbjct: 793 KIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRAKKDIKMGPFDVAR 852
Query: 540 EIF 542
++F
Sbjct: 853 KVF 855
>gi|198453986|ref|XP_001359419.2| GA10826 [Drosophila pseudoobscura pseudoobscura]
gi|198132600|gb|EAL28565.2| GA10826 [Drosophila pseudoobscura pseudoobscura]
Length = 988
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 141/321 (43%), Gaps = 59/321 (18%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV----- 366
K LL GPPG+GKTT A + K G+ VE NASD RS +++++ ++ S+
Sbjct: 475 KAALLSGPPGIGKTTTATLVVKELGFDAVEFNASDTRSKRLLKDEVSTLLGNKSLYGYVN 534
Query: 367 ---MADSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISK 422
A S+ L++DE+DG G + +G ++ ++ ++
Sbjct: 535 GQSQAVSKKHVLIMDEVDGMAGNEDRGGMQELIALI------------------------ 570
Query: 423 KKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKT 482
K +S+ P+IC+CND P +RSL F +P + ++ ++ IC E +K
Sbjct: 571 ----KDSSV--PIICMCNDRNHPKIRSLVNYCFDLRFQRPRLEQIKGKIMSICFKEKVKI 624
Query: 483 SSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV-VGRKDMSRSAFDIWKEI 541
S + + T DIR +N + + ++I ++ KD+ +++ +++
Sbjct: 625 SPAKVEEIIAATNNDIRQSINHISLMSAGEDIPTQSQAKVELKTASKDLKLGPWEVVRKV 684
Query: 542 FQKRKTKRLRNSVSSSSNVSNEFD-FLHSLISNRGDYDVIFDGIHENILQLQYHD---PV 597
F + KR+ + +++ D F H DY + + +N LQ+ +
Sbjct: 685 FTAEEHKRM--------SFADKCDLFFH-------DYSLAPLFVQQNYLQVTPQGNKKDI 729
Query: 598 MLKTVKCLDCLGNSDLMHQYI 618
+ K D L D++ + I
Sbjct: 730 LGKVAATADALSIGDMIDKRI 750
>gi|384948610|gb|AFI37910.1| replication factor C subunit 1 isoform 1 [Macaca mulatta]
Length = 1141
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 143/363 (39%), Gaps = 102/363 (28%)
Query: 194 VHEQLWVDKYAPNSFTELLS---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRR 250
V LWVDKY P S ++ D+ ++L WL+ W +S+SE+ ++
Sbjct: 575 VENLLWVDKYKPTSLKTIIGQQGDQSCANKLLRWLRNWH--------KSSSED-----KK 621
Query: 251 HSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPE 310
H+ + F+ K+ G+ +
Sbjct: 622 HAKFGK--------FSGKDDGSSF------------------------------------ 637
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-- 368
K LL GPPG+GKTT A + + GY VE+NASD RS S+++ + + + S+
Sbjct: 638 -KAALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKSSLKAIVAESLSNTSIKGFY 696
Query: 369 -------DSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
S L++DE+DG G + +G ++ ++ ++ + KI
Sbjct: 697 SNGAASSVSTKHALIMDEVDGMAGNEDRGGIQELIGLI-----------------KHTKI 739
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
P+IC+CND P +RSL F +P V ++ + I E +
Sbjct: 740 -------------PIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAMMSIAFKEGL 786
Query: 481 KTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV-VGRKDMSRSAFDIWK 539
K A+ + DIR L+ L + + L + +KD+ FD+ +
Sbjct: 787 KIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRAKKDIKMGPFDVAR 846
Query: 540 EIF 542
++F
Sbjct: 847 KVF 849
>gi|398411793|ref|XP_003857232.1| hypothetical protein MYCGRDRAFT_32502 [Zymoseptoria tritici IPO323]
gi|339477117|gb|EGP92208.1| hypothetical protein MYCGRDRAFT_32502 [Zymoseptoria tritici IPO323]
Length = 1078
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 41/210 (19%)
Query: 307 GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV 366
G + +++ GPPG+GKTT AH+ AK GY +VE NASD RS +E + V+ S+
Sbjct: 534 GSGTHRAIMIHGPPGIGKTTAAHLVAKLEGYDIVESNASDTRSKKLVETGLKGVLSTTSL 593
Query: 367 M-----------ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKED 415
M A + L++DE+DG +G V + +
Sbjct: 594 MGYFSRGVDDVEASKKKLVLIMDEVDGMSAGDRGGVGALAAV------------------ 635
Query: 416 QPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHIC 475
CKK + P+I ICND P ++ + F +P+ + SR+ I
Sbjct: 636 ----------CKKTQV--PMILICNDRKLPKMKPFDFVTYDVPFRRPTTDMIRSRITTIA 683
Query: 476 NNESMKTSSIALTTLAEYTECDIRSCLNTL 505
E +K + + L E + DIR +N +
Sbjct: 684 YREGLKMPANVINALIEGSGADIRQVVNMI 713
>gi|410917482|ref|XP_003972215.1| PREDICTED: replication factor C subunit 1-like [Takifugu rubripes]
Length = 1157
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 101/431 (23%), Positives = 175/431 (40%), Gaps = 93/431 (21%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV----- 366
K LL GPPG+GKTT A + + G+ VE+NAS RS + +++ + + V S+
Sbjct: 657 KAALLSGPPGVGKTTTASLVCEELGFSYVEMNASCTRSKNNLKDVVAESVNNTSIENFYK 716
Query: 367 ---MADSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISK 422
S L++DE+DG G + +G ++ ++ ++
Sbjct: 717 GTSQTVSNKHVLIMDEVDGMAGNEDRGGIQELIGLI------------------------ 752
Query: 423 KKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKT 482
K+S + P+IC+CND +RSL F +P V ++ + + I E +
Sbjct: 753 -----KSSKI-PIICMCNDRNHMKIRSLSNYCFDLRFQRPRVEQIKAAMMSIAFKEGINI 806
Query: 483 SSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVV-GRKDMSRSAFDIWKEI 541
AL + + D+R ++ L ++++ S RKDM FD+ +++
Sbjct: 807 RPPALNEIILASNQDVRQVMHNLSMWSATDKVMSYDQCKSDAAKARKDMKMGPFDVCRKV 866
Query: 542 FQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENIL---------QLQ 592
F + + R S+ S++ F H DY + + EN L L+
Sbjct: 867 FAAGE-ETARMSLIDKSDL-----FFH-------DYSLAPLFVQENYLNVRPAAAGGNLK 913
Query: 593 YHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWP 652
H +ML + K D + + DL+ + I Q L P AI L ++ +
Sbjct: 914 SH--LMLLS-KAADSISDGDLVDKRIRSGQNWSLL---PTQAIYASVLPGELMR------ 961
Query: 653 KSYQRYRNAFMEKMDIFKSW---------HSKIPPYISRHLSTESLVEDSISPL--LHIL 701
+M + F SW HS+I ++ H+S +++ S L LH L
Sbjct: 962 --------GYMSQFPSFPSWLGKNSSAGKHSRIVQELASHMSLKTMSSRSAVNLDYLHYL 1013
Query: 702 SPPTLRPVALH 712
L P+ H
Sbjct: 1014 RHALLSPLQRH 1024
>gi|384948608|gb|AFI37909.1| replication factor C subunit 1 isoform 1 [Macaca mulatta]
Length = 1147
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 143/363 (39%), Gaps = 102/363 (28%)
Query: 194 VHEQLWVDKYAPNSFTELLS---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRR 250
V LWVDKY P S ++ D+ ++L WL+ W +S+SE+ ++
Sbjct: 581 VENLLWVDKYKPTSLKTIIGQQGDQSCANKLLRWLRNWH--------KSSSED-----KK 627
Query: 251 HSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPE 310
H+ + F+ K+ G+ +
Sbjct: 628 HAKFGK--------FSGKDDGSSF------------------------------------ 643
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-- 368
K LL GPPG+GKTT A + + GY VE+NASD RS S+++ + + + S+
Sbjct: 644 -KAALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKSSLKAIVAESLSNTSIKGFY 702
Query: 369 -------DSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
S L++DE+DG G + +G ++ ++ ++ + KI
Sbjct: 703 SNGAASSVSTKHALIMDEVDGMAGNEDRGGIQELIGLI-----------------KHTKI 745
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
P+IC+CND P +RSL F +P V ++ + I E +
Sbjct: 746 -------------PIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAMMSIAFKEGL 792
Query: 481 KTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV-VGRKDMSRSAFDIWK 539
K A+ + DIR L+ L + + L + +KD+ FD+ +
Sbjct: 793 KIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRAKKDIKMGPFDVAR 852
Query: 540 EIF 542
++F
Sbjct: 853 KVF 855
>gi|417413535|gb|JAA53090.1| Putative replication factor c subunit rfc1 large subunit, partial
[Desmodus rotundus]
Length = 1140
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 160/404 (39%), Gaps = 110/404 (27%)
Query: 161 DVLLQKVEQE--AFNKALN------SSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELL 212
DV ++ V++E AF + L+ + G S + V + LWVDKY P S ++
Sbjct: 534 DVSVKSVKKETSAFQRGLDFKEQMAEETSGDSRARQSAENTVADLLWVDKYKPASLKAII 593
Query: 213 S---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKN 269
D+ ++L WL+ W +S SE+ +RH+ + F K+
Sbjct: 594 GQQGDQSCANKLLRWLQNWH--------KSPSED-----QRHAKFGK--------FAGKD 632
Query: 270 RGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAH 329
G+ + K LL GPPG+GKTT A
Sbjct: 633 DGSSF-------------------------------------KAALLSGPPGVGKTTTAS 655
Query: 330 VAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA---------DSRPKCLVIDEI 380
+ + GY VE+NASD RS ++++ + + + S+ S L++DE+
Sbjct: 656 LVCQELGYSYVELNASDTRSKNSLKEIVAESLSNTSIKGFYSSGAAPSGSTRHALIMDEV 715
Query: 381 DGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICIC 439
DG G + +G ++ ++ ++ + KI P+IC+C
Sbjct: 716 DGMAGSEDRGGIQELIGLI-----------------KHTKI-------------PIICMC 745
Query: 440 NDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIR 499
ND P +RSL F +P V ++ + + + E +K A+ + DIR
Sbjct: 746 NDRNHPKIRSLVHHCFDLRFQRPRVEQIKAAMLSVAFKEGLKIPPPAMNEIILGANQDIR 805
Query: 500 SCLNTLQFLDKKKEILNVMDIGSQV-VGRKDMSRSAFDIWKEIF 542
L+ L + + L + +KD+ FD+ +++F
Sbjct: 806 QVLHNLSMWSAQSKALTYDQAKADSHRAKKDVKLGPFDVARKVF 849
>gi|157117839|ref|XP_001653061.1| replication factor C large subunit, putative [Aedes aegypti]
gi|108883325|gb|EAT47550.1| AAEL001324-PA [Aedes aegypti]
Length = 1047
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 139/334 (41%), Gaps = 63/334 (18%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMAD-- 369
K LL GPPG+GKTT A + K G+ VE NASD RS ++ ++ +++ S+
Sbjct: 538 KAALLSGPPGVGKTTTATLVCKELGFDAVEFNASDTRSKKLLKEEVSELLNNKSLFGYFT 597
Query: 370 --------SRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
S+ L++DE+DG G + +G ++ ++ ++ + S+
Sbjct: 598 EGGKGDKVSKKHVLIMDEVDGMAGNEDRGGIQELIGLI---KDSHV-------------- 640
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
P+IC+CND +RSL F +P V ++ + +C E +
Sbjct: 641 -------------PIICMCNDRNHQKMRSLVNYCFDLRFNKPRVEQIKGAMMSVCFKEGL 687
Query: 481 KTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV-VGRKDMSRSAFDIWK 539
K + AL + T D+R LN L NV + RKD+ +D+ +
Sbjct: 688 KLAPGALEEIISGTGGDVRQTLNHLALYSAG----NVDQAKKEAETARKDVKMGPWDVVR 743
Query: 540 EIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDP--- 596
++F + K + S+ S++ F H DY + + EN L++ P
Sbjct: 744 KVFSAEEHKTM--SIHDKSDL-----FFH-------DYSLAPLFVQENYLKVAPRVPKSQ 789
Query: 597 VMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQ 630
+M + D L D++ + I + L Q
Sbjct: 790 LMDQVALAADSLSRGDMVDRRIRSSMAWSLLPLQ 823
>gi|240275879|gb|EER39392.1| chromosome transmission fidelity factor [Ajellomyces capsulatus
H143]
Length = 1071
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 92/216 (42%), Gaps = 41/216 (18%)
Query: 301 KKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENK---I 357
KK G + +++ GPPG+GKTT AH+ AK Y VVE NASD RS S +E +
Sbjct: 513 KKGGKDGTGIYRAVMIHGPPGIGKTTAAHLVAKLENYDVVESNASDTRSKSLVETGLRGV 572
Query: 358 LDVVQMNSVMADSRPKC--------LVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKE 409
LD + + K L++DE+DG +G V + +
Sbjct: 573 LDTTSLQGYFSGEGKKVESGKKNLVLIMDEVDGMSAGDRGGVGALAAV------------ 620
Query: 410 NVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVS 469
KK + P+I ICN+ P +R + F +P+V ++ +
Sbjct: 621 ----------------AKKTRI--PMILICNERRLPKMRPFDSVTFDLPFRRPTVEQIRA 662
Query: 470 RLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
RL IC E +K L L + T DIR +N L
Sbjct: 663 RLSTICYREGLKIPPQVLDNLIQGTHADIRQVINML 698
>gi|367009250|ref|XP_003679126.1| hypothetical protein TDEL_0A05830 [Torulaspora delbrueckii]
gi|359746783|emb|CCE89915.1| hypothetical protein TDEL_0A05830 [Torulaspora delbrueckii]
Length = 856
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 133/327 (40%), Gaps = 56/327 (17%)
Query: 315 LLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA------ 368
+L GPPG+GKTT AH+ AK GY ++E NASD RS S + N I + + SV
Sbjct: 345 MLYGPPGIGKTTAAHLVAKELGYDILEQNASDVRSKSLLNNGIKNSLDNMSVFGYFKGRT 404
Query: 369 -----DSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKK 423
+ + +++DE+DG G +G V +
Sbjct: 405 DPSGSNGKKFVIIMDEVDGMSGGDRGGVGQLASF-------------------------- 438
Query: 424 KGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTS 483
C+K S P+I ICN+ P +R ++ F +P + + +RL I E K
Sbjct: 439 --CRKTST--PMILICNERNLPKMRPFDRVCLDVQFRRPDANSIKARLMTIAVREKFKLD 494
Query: 484 SIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGS-QVVGRKDMSRSAFDIWKEIF 542
+ L + T DIR +N L + K + +N +I K+++ FDI ++
Sbjct: 495 PNVIDKLVQATRGDIRQIVNLLSTITKTSKQINHENITEISAAWEKNIALKPFDIAHKLL 554
Query: 543 QKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENIL-----QLQYHDPV 597
R + N + F+ + D+D I EN L L+
Sbjct: 555 DGR---------IYTENGAQHFNLNEKIALYFDDFDFAPLMIQENYLSTRPSNLKKGQSH 605
Query: 598 MLKTVKCLDCLGNSDLMHQYIMRTQQM 624
+ + + + S+L+ + I ++Q+
Sbjct: 606 LSAVAEAAESISQSNLVEKRIRSSEQL 632
>gi|325093242|gb|EGC46552.1| chromosome transmission fidelity protein [Ajellomyces capsulatus
H88]
Length = 1071
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 92/216 (42%), Gaps = 41/216 (18%)
Query: 301 KKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENK---I 357
KK G + +++ GPPG+GKTT AH+ AK Y VVE NASD RS S +E +
Sbjct: 513 KKGGKDGTGIYRAVMIHGPPGIGKTTAAHLVAKLENYDVVESNASDTRSKSLVETGLRGV 572
Query: 358 LDVVQMNSVMADSRPKC--------LVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKE 409
LD + + K L++DE+DG +G V + +
Sbjct: 573 LDTTSLQGYFSGEGKKVESGKKNLVLIMDEVDGMSAGDRGGVGALAAV------------ 620
Query: 410 NVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVS 469
KK + P+I ICN+ P +R + F +P+V ++ +
Sbjct: 621 ----------------AKKTRI--PMILICNERRLPKMRPFDSVTFDLPFRRPTVEQIRA 662
Query: 470 RLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
RL IC E +K L L + T DIR +N L
Sbjct: 663 RLSTICYREGLKIPPQVLDNLIQGTHADIRQVINML 698
>gi|294932355|ref|XP_002780231.1| replication factor C subunit, putative [Perkinsus marinus ATCC
50983]
gi|239890153|gb|EER12026.1| replication factor C subunit, putative [Perkinsus marinus ATCC
50983]
Length = 829
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 122/258 (47%), Gaps = 43/258 (16%)
Query: 304 RSTGPPEQ---KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDV 360
R G PE K +L+ GPPG+GKTT + A+ GY +E NASD R+ +T++N +
Sbjct: 335 RGRGVPENVNAKAVLVSGPPGIGKTTACRLVARELGYMPMEFNASDQRNKATVDN-LASG 393
Query: 361 VQMNSVMADS----RPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQ 416
+ N+V+ + + CLV+DE+DG G +G +++++
Sbjct: 394 LATNAVIGQNYSLKQKPCLVMDEVDGMSGGDRGGGAALIQLI------------------ 435
Query: 417 PEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICN 476
KK+ + PV+CICND + +RSL F +P+ ++ R+ I
Sbjct: 436 ----------KKSKM--PVMCICNDRMSTKVRSLANSCYDIRFTKPTGAQCSQRVAAIAK 483
Query: 477 NESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEI--LNVMDIGSQVVGRKDMSR-- 532
+E + + A+ LAE D+R +N L+ L E + +G++ G KD+
Sbjct: 484 SEGVHVDTDAMAMLAEQLGGDMRQIINNLEMLSLAAESGKAATVSVGTR-GGGKDVQNML 542
Query: 533 SAFDIWKEIFQKRKTKRL 550
S FD+ K + +RL
Sbjct: 543 SPFDVCKTLLTSTMARRL 560
>gi|385773315|ref|YP_005645881.1| AAA ATPase [Sulfolobus islandicus HVE10/4]
gi|385775947|ref|YP_005648515.1| AAA ATPase [Sulfolobus islandicus REY15A]
gi|323474695|gb|ADX85301.1| AAA ATPase central domain protein [Sulfolobus islandicus REY15A]
gi|323477429|gb|ADX82667.1| AAA ATPase central domain protein [Sulfolobus islandicus HVE10/4]
Length = 405
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 125/283 (44%), Gaps = 49/283 (17%)
Query: 307 GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV 366
G P K +LL GPPG+GKTTLA A ++E+NASD R I++ + + +
Sbjct: 36 GKPNAKAVLLHGPPGVGKTTLAEALAHDYNLELLEMNASDSRKLQDIKS-VAEKASVYGS 94
Query: 367 MADSRPKCLVIDEIDGA-LGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKG 425
+ +R K +++DE+DG + + GA++ IL+++ +
Sbjct: 95 IFGTRGKLILLDEVDGINVREDTGAIQGILELIEKTK----------------------- 131
Query: 426 CKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSI 485
P+I ND + PALR LR K+ + + LK IC E +
Sbjct: 132 -------YPIIMTANDPWNPALRELRNKTKMVGLNKLGKYPLRRLLKKICQAEKIICDDE 184
Query: 486 ALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKR 545
AL + + +E D R +N LQ + + + +D+ + RK+ F+ ++IF R
Sbjct: 185 ALNYIIDTSEGDARYAINMLQGIGEGYGKV-TLDLVEAMARRKERELDPFETLRDIFWAR 243
Query: 546 KTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENI 588
+ +N+ +S+ + DYD++ I ENI
Sbjct: 244 YAWQAKNAATSA----------------QIDYDMLIRWISENI 270
>gi|315050906|ref|XP_003174827.1| hypothetical protein MGYG_02357 [Arthroderma gypseum CBS 118893]
gi|311340142|gb|EFQ99344.1| hypothetical protein MGYG_02357 [Arthroderma gypseum CBS 118893]
Length = 1055
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 94/226 (41%), Gaps = 48/226 (21%)
Query: 298 SWHKKTRST-------GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSS 350
+WH R+ G + +++ GPPG+GKTT AH+ AK + +VE NASD RS
Sbjct: 487 NWHANARANFKKPGKDGSGTYRTVMIHGPPGIGKTTAAHLVAKLENFDIVETNASDTRSK 546
Query: 351 STIEN---KILDVVQMNSVMADSRPKC--------LVIDEIDGALGDGKGAVEVILKMVS 399
+E +LD + + K L++DE+DG +G V + +
Sbjct: 547 KLLETTLRGVLDTTSLQGYFSGEGKKVEPGKKNLVLIMDEVDGMSAGDRGGVGAVAAI-- 604
Query: 400 AERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVF 459
KK + P+I ICN+ P ++ + F
Sbjct: 605 --------------------------AKKTRI--PIILICNERRLPKMKPFDHVTFELPF 636
Query: 460 IQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
+P+ ++ +RL IC E +K S L L E T DIR +N L
Sbjct: 637 RRPTAEQIRARLFTICYREGIKISPQVLDGLIEGTHADIRQVINML 682
>gi|227830341|ref|YP_002832121.1| replication factor C large subunit [Sulfolobus islandicus L.S.2.15]
gi|229579158|ref|YP_002837556.1| replication factor C large subunit [Sulfolobus islandicus
Y.G.57.14]
gi|284997766|ref|YP_003419533.1| ATPase AAA, central domain protein [Sulfolobus islandicus L.D.8.5]
gi|259585236|sp|C3MQ13.1|RFCL_SULIL RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|259585591|sp|C3NE95.1|RFCL_SULIY RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|227456789|gb|ACP35476.1| AAA ATPase central domain protein [Sulfolobus islandicus L.S.2.15]
gi|228009872|gb|ACP45634.1| AAA ATPase central domain protein [Sulfolobus islandicus Y.G.57.14]
gi|284445661|gb|ADB87163.1| AAA ATPase, central domain protein [Sulfolobus islandicus L.D.8.5]
Length = 405
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 124/283 (43%), Gaps = 49/283 (17%)
Query: 307 GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV 366
G P K +LL GPPG+GKTTLA A ++E+NASD R I+ + + +
Sbjct: 36 GKPNAKAVLLHGPPGVGKTTLAEALAHDYNLELLEMNASDSRKLQDIKG-VAEKASVYGS 94
Query: 367 MADSRPKCLVIDEIDGA-LGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKG 425
+ +R K +++DE+DG + + GA++ IL+++ +
Sbjct: 95 IFGTRGKLILLDEVDGINVREDTGAIQGILELIEKTK----------------------- 131
Query: 426 CKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSI 485
P+I ND + PALR LR K+ + + LK IC E +
Sbjct: 132 -------YPIIMTANDPWNPALRELRNKTKMVGLNKLGKYPLRRLLKKICQAEKIICDDE 184
Query: 486 ALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKR 545
AL + + +E D R +N LQ + + + +D+ + RK+ F+ ++IF R
Sbjct: 185 ALNYIIDTSEGDARYAINMLQGIGEGYGKV-TLDLVEAMARRKERELDPFETLRDIFWAR 243
Query: 546 KTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENI 588
+ +N+ +S+ + DYD++ I ENI
Sbjct: 244 YAWQAKNAATSA----------------QIDYDMLIRWISENI 270
>gi|238619813|ref|YP_002914639.1| replication factor C large subunit [Sulfolobus islandicus M.16.4]
gi|259585253|sp|C4KHA7.1|RFCL_SULIK RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|238380883|gb|ACR41971.1| AAA ATPase central domain protein [Sulfolobus islandicus M.16.4]
Length = 405
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 125/283 (44%), Gaps = 49/283 (17%)
Query: 307 GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV 366
G P K +LL GPPG+GKTTLA A ++E+NASD R I++ + + +
Sbjct: 36 GKPNAKAVLLHGPPGVGKTTLAEALAHDYNLELLEMNASDSRKLQDIKS-VAEKASVYGS 94
Query: 367 MADSRPKCLVIDEIDGA-LGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKG 425
+ +R K +++DE+DG + + GA++ IL+++ +
Sbjct: 95 IFGTRGKLILLDEVDGINVREDTGAIQGILELIEKTK----------------------- 131
Query: 426 CKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSI 485
P+I ND + PALR LR K+ + + LK IC E +
Sbjct: 132 -------YPIIMTANDPWNPALRELRNKTKMVGLNKLGKYPLRRLLKKICQAEKIICDDE 184
Query: 486 ALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKR 545
AL + + +E D R +N LQ + + + +D+ + RK+ F+ ++IF R
Sbjct: 185 ALNYIIDTSEGDARYAINMLQGIGEGYGKV-TLDLVEAMARRKERELDPFETLRDIFWAR 243
Query: 546 KTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENI 588
+ +N+ +S+ + DYD++ I ENI
Sbjct: 244 YAWQAKNAATSA----------------QIDYDMLIRWISENI 270
>gi|357608191|gb|EHJ65870.1| putative replication factor C large subunit [Danaus plexippus]
Length = 989
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 151/355 (42%), Gaps = 78/355 (21%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMAD-- 369
+ LL GPPG+GKTT + K G+ VE+NASD RS + ++ ++ +++ N++ A
Sbjct: 497 RAALLSGPPGVGKTTTVSLVCKELGFDTVELNASDTRSKTLLKEQLGELLSTNTLQAYAT 556
Query: 370 --------SRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
S+ LV+DE+DG G + +G ++ ++ ++
Sbjct: 557 GCAGKGAVSKKHVLVMDEVDGMAGNEDRGGLQELISLI---------------------- 594
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
K S+ PVIC+CND + +RSL F +P + ++ S + IC E +
Sbjct: 595 ------KTTSV--PVICMCNDRNSEKMRSLVNYCYDLKFARPRLEQIKSAMMSICFKEGI 646
Query: 481 KTSSIALTTLAEYTECDIRSCLNTLQFL------DKKKEILNVMDIGSQVVGRKDMSRSA 534
K S AL+ L + DIR ++ L D+ K + RKD+
Sbjct: 647 KISPEALSQLIVSSGQDIRQTVHLLSVCASGLTSDEAKAV------------RKDIKMGP 694
Query: 535 FDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYH 594
++ +++F + K + ++ ++ D DY ++ + EN L + H
Sbjct: 695 WEAIRKVFSAEEHKTM--------SIIDKSDLFFC------DYSIMPLFVQENFLNVTPH 740
Query: 595 DP---VMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLA--ITVHRLVSQI 644
P ++ + K D L DL+ I +Q L Q + I H+L +
Sbjct: 741 CPKNEILDRFSKAADSLSLGDLVEARIRGSQAWNLLPTQAMFSSVIPGHQLSGHV 795
>gi|58260802|ref|XP_567811.1| purine nucleotide binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|134117247|ref|XP_772850.1| hypothetical protein CNBK2210 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255468|gb|EAL18203.1| hypothetical protein CNBK2210 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229892|gb|AAW46294.1| purine nucleotide binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 1001
Score = 93.2 bits (230), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 151/359 (42%), Gaps = 75/359 (20%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIEN------KILD------ 359
+ +L+ GPPG+GKTT AH+ AK GY +E+NASD RS IEN K LD
Sbjct: 470 RAVLISGPPGIGKTTSAHLMAKEAGYTPLELNASDTRSKKLIENETNVDNKSLDGFFKGQ 529
Query: 360 -VVQMNS--VMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQ 416
V +N+ + DSR CL++DE+DG +G V + ++
Sbjct: 530 GVGDINAAGLKIDSR-TCLIMDEVDGMSAGDRGGVGALNTLI------------------ 570
Query: 417 PEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICN 476
KK + P+I ICND ++ L+ F +P + + SR+ I +
Sbjct: 571 ----------KKTKI--PMILICNDRTLQKMKPLQSTTFNMTFRRPQPNEIRSRIMSILH 618
Query: 477 NESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV--VGRKDMSRSA 534
E +K + L + DIR LN L K +N D G Q+ V K+ +
Sbjct: 619 KEKLKIPPNVVDELVKGVNSDIRQVLNMLSTFKLGKSEMN-FDEGKQLVKVNEKNTIMTP 677
Query: 535 FDIWKEI-----FQKRKTKRLRNSVSSSSNVSNEFDFL------HSLISNRGDYDVIFDG 583
F I + F K + L + + ++F F+ H L +N + + DG
Sbjct: 678 FTIIDRLTGPYAFSKNSKETLGDRIEL---YFHDFSFVPLFMQEHYLKTNPTVLNNL-DG 733
Query: 584 IHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQ----MPLYVYQPPLAITVH 638
+N+ L+ K D + + DL+ + I ++Q +PL+ + +H
Sbjct: 734 PEKNLKHLEL-------VSKAADSISDGDLIDRMIHGSEQHWSLLPLHAVASTVKPAMH 785
>gi|347524284|ref|YP_004781854.1| AAA ATPase central domain containing protein [Pyrolobus fumarii 1A]
gi|343461166|gb|AEM39602.1| AAA ATPase central domain protein [Pyrolobus fumarii 1A]
Length = 504
Score = 93.2 bits (230), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 132/310 (42%), Gaps = 51/310 (16%)
Query: 288 ENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDD 347
+ +K + W K+ S PPE+K +L GP G GKT+L AA +VE+NASD
Sbjct: 33 DQEQAKRLFVPWLKQWLSGKPPEKKAVLFYGPAGCGKTSLVEAAAHEYNLELVEMNASDF 92
Query: 348 RSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALGDG-KGAVEVILKMVSAERKSNT 406
R IE + V + R K +++DE+DG G KG ++ +L ++
Sbjct: 93 RRKEDIER--VARVAATQMSLFGRKKIILLDEVDGISGTADKGGLDAVLHLI-------- 142
Query: 407 AKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSR 466
VAK P++ ND + L+ LR + + F +
Sbjct: 143 ---EVAKH-------------------PIVMTANDPWDQKLKPLRDASLMVPFYRLQDRY 180
Query: 467 VVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVG 526
VV L IC E + AL LA+ E D+RS +N LQ + + + V + +
Sbjct: 181 VVEVLSRICKLEGIHCEPEALELLAKRAEGDLRSAINDLQGIAEGYGEVTVQLVQALATS 240
Query: 527 RKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHE 586
R D + +++ +F+ + + + +V+ ++ DY+ I I+E
Sbjct: 241 R-DREYNPYEMLDHLFKSKYAWQAKRAVTHANL----------------DYETILQWINE 283
Query: 587 NILQLQYHDP 596
NI + Y DP
Sbjct: 284 NI-PVAYDDP 292
>gi|156087871|ref|XP_001611342.1| hypothetical protein [Babesia bovis T2Bo]
gi|154798596|gb|EDO07774.1| conserved hypothetical protein [Babesia bovis]
Length = 944
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 164/389 (42%), Gaps = 69/389 (17%)
Query: 315 LLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVV--QMNSVMADSRP 372
LL GPPG+GKTT A + A CGY VE NASD R+ S +E + V Q S + + R
Sbjct: 472 LLSGPPGVGKTTTAKIVAAECGYECVEFNASDLRNKSAVEKISMLVTGGQSFSFLGECRM 531
Query: 373 K--CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKAS 430
K +++DEIDG +G ++ ++ ++ R C
Sbjct: 532 KKSLVLLDEIDGMGAGDRGGLQAVVALLPKAR-----------------------C---- 564
Query: 431 LLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTL 490
P+ICICND + + +L + F P++ + +R+ +C E + + L
Sbjct: 565 ---PIICICNDRHNQKMTTLGGKSLDVRFSSPTLMQFRARIASVCAAEGITVPQDTVAQL 621
Query: 491 AEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIW--KEIFQKRKTK 548
E D R LN ++F ++ D GS+ G A DI K +F+ T
Sbjct: 622 YEQGGGDFRHALNAIEF-------NSLGDSGSK--GHALSGSDAKDIGHTKNLFE--ATG 670
Query: 549 RLRNSVSSSSNVS-NEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDC 607
RL ++ S S+ E + + + DY+++ EN ++ PV + + L
Sbjct: 671 RLFSARSGSTEKRYRELEQIFFI-----DYNMMPLMAQENYIKFI---PVNNRALSILQA 722
Query: 608 LGNS----DLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFM 663
L S D + +++ RTQ L P LAI L + + + R R F
Sbjct: 723 LSQSFVEADRVEEFLKRTQSFSLL---PDLAILSSILPAMV----ISTAGGSCRERLMFP 775
Query: 664 EKMDIFK--SWHSKIPPYISRHLSTESLV 690
+ + F S + + I +H+ SL+
Sbjct: 776 QYLGRFSTTSKNKRFLSDIGKHMGHRSLI 804
>gi|402869167|ref|XP_003898638.1| PREDICTED: LOW QUALITY PROTEIN: replication factor C subunit 1 [Papio
anubis]
Length = 1147
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 119/575 (20%), Positives = 212/575 (36%), Gaps = 159/575 (27%)
Query: 194 VHEQLWVDKYAPNSFTELLS---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRR 250
V LWVDKY P S ++ D+ ++L WL+ W
Sbjct: 580 VENLLWVDKYKPTSLKTIIGQQGDQSCANKLLRWLRNW---------------------- 617
Query: 251 HSTISQNKKQND--SSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGP 308
H + S++KK F+ K+ G+ +
Sbjct: 618 HKSSSEDKKHAAKFGKFSGKDDGSSF---------------------------------- 643
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA 368
K LL GPPG+GKTT A + + GY VE+NASD RS S+++ + + + S+
Sbjct: 644 ---KAALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKSSLKAIVAESLSNTSIKG 700
Query: 369 ---------DSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPE 418
S L++DE+DG G + +G ++ ++ ++ +
Sbjct: 701 FYSNGAASSVSTKHALIMDEVDGMAGNEDRGGIQELIGLI-----------------KHT 743
Query: 419 KISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNE 478
KI P+IC+CND P +RSL F +P V ++ + I E
Sbjct: 744 KI-------------PIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAMMSIAFKE 790
Query: 479 SMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV-VGRKDMSRSAFDI 537
+K A+ + DIR L+ L + + L + +KD+ FD+
Sbjct: 791 GLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRAKKDIKMGPFDV 850
Query: 538 WKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPV 597
+++F + + S+ S++ F H DY + + EN + ++ PV
Sbjct: 851 ARKVFAAGE-ETAHMSLMDKSDL-----FFH-------DYSIAPLFVQENYIHVK---PV 894
Query: 598 ---------MLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPN 648
++ + D + + DL+ I Q L P AI L ++ +
Sbjct: 895 AAGGDMKKHLMLLSRAADSICDGDLVDSQIRSKQNWSLL---PTQAIYASVLPGELMR-- 949
Query: 649 LEWPKSYQRYRNAFMEKMDIFKSW---------HSKIPPYISRHLSTESLVEDSISPLLH 699
FM + F SW H +I ++ H+S + + +
Sbjct: 950 ------------GFMTQFPTFPSWLGKHSSTGKHDRIVQDLALHMSLRTYSSKRTVNMDY 997
Query: 700 ILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSL 734
+ LR + L+++ + + +V+ M +Y L
Sbjct: 998 L---SHLRDALVQPLTSQGVDGVQDVVALMDTYYL 1029
>gi|30353858|gb|AAH51786.1| RFC1 protein [Homo sapiens]
gi|167774195|gb|ABZ92532.1| replication factor C (activator 1) 1, 145kDa [synthetic construct]
Length = 1148
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 142/363 (39%), Gaps = 101/363 (27%)
Query: 194 VHEQLWVDKYAPNSFTELLS---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRR 250
V LWVDKY P S ++ D+ ++L WL+ W +S+SE+ ++
Sbjct: 581 VENLLWVDKYKPTSLKTIIGQQGDQSCANKLLRWLRNWQ--------KSSSED-----KK 627
Query: 251 HSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPE 310
H+ F+ K+ G+ +
Sbjct: 628 HAA-------KFGKFSGKDDGSSF------------------------------------ 644
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-- 368
K LL GPPG+GKTT A + + GY VE+NASD RS S+++ + + + S+
Sbjct: 645 -KAALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKSSLKAIVAESLNNTSIKGFY 703
Query: 369 -------DSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
S L++DE+DG G + +G ++ ++ ++ + KI
Sbjct: 704 SNGAASSVSTKHALIMDEVDGMAGNEDRGGIQELIGLI-----------------KHTKI 746
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
P+IC+CND P +RSL F +P V ++ + I E +
Sbjct: 747 -------------PIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAMMSIAFKEGL 793
Query: 481 KTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV-VGRKDMSRSAFDIWK 539
K A+ + DIR L+ L + + L + +KD+ FD+ +
Sbjct: 794 KIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRAKKDIKMGPFDVAR 853
Query: 540 EIF 542
++F
Sbjct: 854 KVF 856
>gi|88602207|ref|YP_502385.1| replication factor C large subunit [Methanospirillum hungatei JF-1]
gi|110287809|sp|Q2FQR4.1|RFCL_METHJ RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|88187669|gb|ABD40666.1| replication factor C large subunit [Methanospirillum hungatei JF-1]
Length = 483
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 133/334 (39%), Gaps = 64/334 (19%)
Query: 299 WHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKIL 358
W + PP L+L G PG+GKT+ A A + VVE+NASD R+ + IE
Sbjct: 28 WATRWTVESPP----LILYGKPGIGKTSSAWALAHDMNWEVVELNASDQRTKAVIEKVAG 83
Query: 359 DVVQMNSVMADSRPKCLVIDEIDGALGDG-KGAVEVILKMVSAERKSNTAKENVAKEDQP 417
S+ +R K +++DE D G+ +G I +++ R+
Sbjct: 84 GSASTGSLTGAAR-KLIILDEADNLQGNADRGGARAIAEVIRQARQ-------------- 128
Query: 418 EKISKKKGCKKASLLRPVICICNDLYA--PALRSLRQIAKVHVFIQPSVSRVVSRLKHIC 475
P+I I NDLY +R+L KV P+ S +V RL+ IC
Sbjct: 129 ----------------PLILIANDLYGLDGTIRNL--CTKVQFKALPAKS-LVPRLREIC 169
Query: 476 NNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAF 535
+ E + S+ ALT +AE + DIRS + +L IG VG D+S SA
Sbjct: 170 SREQLTCSAQALTDIAEQSGGDIRSAVT----------MLYASAIGKDTVGEDDVSISAK 219
Query: 536 DIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHD 595
D IF V S ++S D D I I N+ L
Sbjct: 220 DSRASIFDLVAATLGYRQVPSLLDMSMSVDETP---------DTILQWIEGNLGVL---- 266
Query: 596 PVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVY 629
P KT + L +D+ Y TQ L+ Y
Sbjct: 267 PDRKKTAQAYAALSRADMYLGYTFLTQYYTLWRY 300
>gi|426344090|ref|XP_004038609.1| PREDICTED: replication factor C subunit 1 [Gorilla gorilla gorilla]
Length = 1148
Score = 92.8 bits (229), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 142/363 (39%), Gaps = 101/363 (27%)
Query: 194 VHEQLWVDKYAPNSFTELLS---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRR 250
V LWVDKY P S ++ D+ ++L WL+ W +S+SE+ ++
Sbjct: 581 VENLLWVDKYKPTSLKTIIGQQGDQSCANKLLRWLRNWQ--------KSSSED-----KK 627
Query: 251 HSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPE 310
H+ F+ K+ G+ +
Sbjct: 628 HAA-------KFGKFSGKDDGSSF------------------------------------ 644
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-- 368
K LL GPPG+GKTT A + + GY VE+NASD RS S+++ + + + S+
Sbjct: 645 -KAALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKSSLKAIVAESLNNTSIKGFY 703
Query: 369 -------DSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
S L++DE+DG G + +G ++ ++ ++ + KI
Sbjct: 704 SNGAASSVSTKHALIMDEVDGMAGNEDRGGIQELIGLI-----------------KHTKI 746
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
P+IC+CND P +RSL F +P V ++ + I E +
Sbjct: 747 -------------PIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAMMSIAFKEGL 793
Query: 481 KTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV-VGRKDMSRSAFDIWK 539
K A+ + DIR L+ L + + L + +KD+ FD+ +
Sbjct: 794 KIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRAKKDIKMGPFDVAR 853
Query: 540 EIF 542
++F
Sbjct: 854 KVF 856
>gi|410218|gb|AAA16121.1| replication factor C large subunit [Homo sapiens]
Length = 1148
Score = 92.8 bits (229), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 142/363 (39%), Gaps = 101/363 (27%)
Query: 194 VHEQLWVDKYAPNSFTELLS---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRR 250
V LWVDKY P S ++ D+ ++L WL+ W +S+SE+ ++
Sbjct: 581 VENLLWVDKYKPTSLKTIIGQQGDQSCANKLLRWLRNWQ--------KSSSED-----KK 627
Query: 251 HSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPE 310
H+ F+ K+ G+ +
Sbjct: 628 HAA-------KFGKFSGKDDGSSF------------------------------------ 644
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-- 368
K LL GPPG+GKTT A + + GY VE+NASD RS S+++ + + + S+
Sbjct: 645 -KAALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKSSLKAIVAESLNNTSIKGFY 703
Query: 369 -------DSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
S L++DE+DG G + +G ++ ++ ++ + KI
Sbjct: 704 SNGAASSVSTKHALIMDEVDGMAGNEDRGGIQELIGLI-----------------KHTKI 746
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
P+IC+CND P +RSL F +P V ++ + I E +
Sbjct: 747 -------------PIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAMMSIAFKEGL 793
Query: 481 KTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV-VGRKDMSRSAFDIWK 539
K A+ + DIR L+ L + + L + +KD+ FD+ +
Sbjct: 794 KIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRAKKDIKMGPFDVAR 853
Query: 540 EIF 542
++F
Sbjct: 854 KVF 856
>gi|15669074|ref|NP_247879.1| replication factor C large subunit [Methanocaldococcus jannaschii
DSM 2661]
gi|42559434|sp|Q58294.1|RFCL_METJA RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|1591562|gb|AAB98888.1| activator 1 (replication factor C), 53 KD subunit
[Methanocaldococcus jannaschii DSM 2661]
Length = 516
Score = 92.8 bits (229), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 147/346 (42%), Gaps = 58/346 (16%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSR 371
K +LL GPPG GKTTLA+ A G+ V+E+NASD R+SS I+ + +S+ +
Sbjct: 40 KPILLVGPPGCGKTTLAYALANDYGFEVIELNASDKRNSSAIKKVVGHAATSSSIFG--K 97
Query: 372 PKCLVIDEIDGALG--DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKA 429
+V+DE+DG G D G E+I K KKA
Sbjct: 98 KFLIVLDEVDGISGKEDAGGVSELI-----------------------------KVIKKA 128
Query: 430 SLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTT 489
P+I ND YAP++RSL +V + V LK I E + L
Sbjct: 129 K--NPIILTANDAYAPSIRSLLPYVEVIQLNPVHTNSVYKVLKKIAEKEGLDVDDKTLKM 186
Query: 490 LAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKR 549
+A+++ D+RS +N L+ L ++ + ++ RK + + FD + I KT
Sbjct: 187 IAQHSAGDLRSAINDLEALALSGDL--SYEAAQKLPDRKREA-NIFDALRVIL---KTTH 240
Query: 550 LRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLG 609
+ ++ NV DV+ + I EN+ + +Y P + + + L
Sbjct: 241 YGIATTALMNVDE-------------TPDVVIEWIAENVPK-EYEKPE--EVARAFEYLS 284
Query: 610 NSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSY 655
+D +MR Q + Y L +T +S+ +K P SY
Sbjct: 285 KADRYLGRVMRRQNYSFWKYATTL-MTAGVALSKDEKYRKWTPYSY 329
>gi|325296984|ref|NP_001191676.1| replication factor C subunit 1 isoform 2 [Homo sapiens]
gi|56757608|sp|P35251.4|RFC1_HUMAN RecName: Full=Replication factor C subunit 1; AltName:
Full=Activator 1 140 kDa subunit; Short=A1 140 kDa
subunit; AltName: Full=Activator 1 large subunit;
AltName: Full=Activator 1 subunit 1; AltName:
Full=DNA-binding protein PO-GA; AltName:
Full=Replication factor C 140 kDa subunit; Short=RF-C
140 kDa subunit; Short=RFC140; AltName: Full=Replication
factor C large subunit
gi|52632416|gb|AAH35297.1| Replication factor C (activator 1) 1, 145kDa [Homo sapiens]
gi|119613329|gb|EAW92923.1| replication factor C (activator 1) 1, 145kDa, isoform CRA_b [Homo
sapiens]
gi|158256656|dbj|BAF84301.1| unnamed protein product [Homo sapiens]
Length = 1148
Score = 92.8 bits (229), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 142/363 (39%), Gaps = 101/363 (27%)
Query: 194 VHEQLWVDKYAPNSFTELLS---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRR 250
V LWVDKY P S ++ D+ ++L WL+ W +S+SE+ ++
Sbjct: 581 VENLLWVDKYKPTSLKTIIGQQGDQSCANKLLRWLRNWQ--------KSSSED-----KK 627
Query: 251 HSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPE 310
H+ F+ K+ G+ +
Sbjct: 628 HAA-------KFGKFSGKDDGSSF------------------------------------ 644
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-- 368
K LL GPPG+GKTT A + + GY VE+NASD RS S+++ + + + S+
Sbjct: 645 -KAALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKSSLKAIVAESLNNTSIKGFY 703
Query: 369 -------DSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
S L++DE+DG G + +G ++ ++ ++ + KI
Sbjct: 704 SNGAASSVSTKHALIMDEVDGMAGNEDRGGIQELIGLI-----------------KHTKI 746
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
P+IC+CND P +RSL F +P V ++ + I E +
Sbjct: 747 -------------PIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAMMSIAFKEGL 793
Query: 481 KTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV-VGRKDMSRSAFDIWK 539
K A+ + DIR L+ L + + L + +KD+ FD+ +
Sbjct: 794 KIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRAKKDIKMGPFDVAR 853
Query: 540 EIF 542
++F
Sbjct: 854 KVF 856
>gi|227827645|ref|YP_002829425.1| replication factor C large subunit [Sulfolobus islandicus M.14.25]
gi|229584849|ref|YP_002843351.1| replication factor C large subunit [Sulfolobus islandicus M.16.27]
gi|259585252|sp|C3N5N1.1|RFCL_SULIA RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|259585254|sp|C3MVD2.1|RFCL_SULIM RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|227459441|gb|ACP38127.1| AAA ATPase central domain protein [Sulfolobus islandicus M.14.25]
gi|228019899|gb|ACP55306.1| AAA ATPase central domain protein [Sulfolobus islandicus M.16.27]
Length = 405
Score = 92.8 bits (229), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 125/283 (44%), Gaps = 49/283 (17%)
Query: 307 GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV 366
G P K +LL GPPG+GKTTLA A ++E+NASD R I++ + + +
Sbjct: 36 GKPNAKAVLLHGPPGVGKTTLAEALAHDYNLELLEMNASDSRKLQDIKS-VAEKASVYGS 94
Query: 367 MADSRPKCLVIDEIDGA-LGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKG 425
+ +R K +++DE+DG + + GA++ IL+++ +
Sbjct: 95 IFGTRGKLILLDEVDGINVREDTGAIQGILELIEKTK----------------------- 131
Query: 426 CKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSI 485
P+I ND + PALR LR K+ + + LK IC E +
Sbjct: 132 -------YPLIMTANDPWNPALRELRNKTKMVGLNKLGKYPLRRLLKKICQAEKIICDDE 184
Query: 486 ALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKR 545
AL + + +E D R +N LQ + + + +D+ + RK+ F+ ++IF R
Sbjct: 185 ALNYIIDTSEGDARYAINMLQGIGEGYGKV-TLDLVEAMARRKERELDPFETLRDIFWAR 243
Query: 546 KTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENI 588
+ +N+ +S+ + DYD++ I ENI
Sbjct: 244 YAWQAKNAATSA----------------QIDYDMLIRWISENI 270
>gi|393234881|gb|EJD42440.1| DNA replication factor C, large subunit [Auricularia delicata
TFB-10046 SS5]
Length = 814
Score = 92.8 bits (229), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 92/210 (43%), Gaps = 49/210 (23%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKI-LDVVQMNSVMADS 370
+ +L+ GPPG+GKTT AH+ AK GY +E+NASD RS IEN +D ++ MA
Sbjct: 331 RAVLISGPPGVGKTTTAHLVAKMEGYTPLELNASDARSKKLIENGANIDNRSLDGWMAGE 390
Query: 371 RPK------------CLVIDEIDG-ALGD--GKGAVEVILKMVSAERKSNTAKENVAKED 415
K CL++DE+DG + GD G GA+ ++K
Sbjct: 391 EGKTNAVGVAITERTCLIMDEVDGMSAGDRGGVGALNALIKRTKV--------------- 435
Query: 416 QPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHIC 475
P+ICI ND + L+ L+ F +P V ++ SR+ I
Sbjct: 436 ------------------PIICIANDGRSQKLQPLKATTYNMTFSKPQVQQIRSRIMTIV 477
Query: 476 NNESMKTSSIALTTLAEYTECDIRSCLNTL 505
E MK + L + DIR LN L
Sbjct: 478 MREGMKVPPNVIDQLISGAQSDIRQVLNML 507
Score = 40.4 bits (93), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 164 LQKVEQEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLL 223
L++ E++A A + EG + + + EQLW KYAP E+ ++ T ++ L
Sbjct: 250 LEERERKATRAAKKALKEGTGGKKVYDP---SEQLWTTKYAPTKLQEICGNKATVEKLRL 306
Query: 224 WLKQWDSCV 232
WL W + +
Sbjct: 307 WLSAWQASM 315
>gi|114593608|ref|XP_001140765.1| PREDICTED: replication factor C subunit 1 isoform 4 [Pan
troglodytes]
Length = 1148
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 142/363 (39%), Gaps = 101/363 (27%)
Query: 194 VHEQLWVDKYAPNSFTELLS---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRR 250
V LWVDKY P S ++ D+ ++L WL+ W +S+SE+ ++
Sbjct: 581 VENLLWVDKYKPTSLKTIIGQQGDQSCANKLLRWLRNWQ--------KSSSED-----KK 627
Query: 251 HSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPE 310
H+ F+ K+ G+ +
Sbjct: 628 HAA-------KFGKFSGKDDGSSF------------------------------------ 644
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-- 368
K LL GPPG+GKTT A + + GY VE+NASD RS S+++ + + + S+
Sbjct: 645 -KAALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKSSLKAIVAESLNNTSIKGFY 703
Query: 369 -------DSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
S L++DE+DG G + +G ++ ++ ++ + KI
Sbjct: 704 SNGAASSVSTKHALIMDEVDGMAGNEDRGGIQELIGLI-----------------KHTKI 746
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
P+IC+CND P +RSL F +P V ++ + I E +
Sbjct: 747 -------------PIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAMMSIAFKEGL 793
Query: 481 KTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV-VGRKDMSRSAFDIWK 539
K A+ + DIR L+ L + + L + +KD+ FD+ +
Sbjct: 794 KIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRAKKDIKMGPFDVAR 853
Query: 540 EIF 542
++F
Sbjct: 854 KVF 856
>gi|312371248|gb|EFR19483.1| hypothetical protein AND_22348 [Anopheles darlingi]
Length = 1111
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 138/324 (42%), Gaps = 62/324 (19%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMAD-- 369
K LL GPPG+GKTT A + + G+ VE NASD RS ++ ++ +++ S+
Sbjct: 532 KAALLSGPPGVGKTTTATLVCQELGFDTVEFNASDTRSKRLLKEEVSELLNSKSLAGYFG 591
Query: 370 ------SRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISK 422
S L++DE+DG G + +G ++ ++ ++
Sbjct: 592 GKSNKVSAKHVLLMDEVDGMAGNEDRGGMQELIALI------------------------ 627
Query: 423 KKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKT 482
K S + P+IC+CND P +RSL F +P V ++ + IC E +K
Sbjct: 628 -----KESHI-PIICMCNDRNHPKIRSLVNHCFDLRFNRPRVEQIKGAMMSICFKEGLKL 681
Query: 483 SSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV----VGRKDMSRSAFDIW 538
+ L + T D+R LN L K + M + + +KD+ +D+
Sbjct: 682 APGVLEEIITGTGGDVRQTLNHLALYSAGKSMAASMSVDAAKKQADSSKKDIKIGPWDVI 741
Query: 539 KEIFQKRKTKRLRNSVSSSSNVSNEFD-FLHSLISNRGDYDVIFDGIHENILQLQYHDP- 596
+++F K S ++++ D F H DY++ + EN L++Q P
Sbjct: 742 RKVFSAEDHK--------SMTLNDKADLFFH-------DYNIAPLFVQENYLKVQPKAPR 786
Query: 597 --VMLKTVKCLDCLGNSDLMHQYI 618
++ + D L D++ + I
Sbjct: 787 SELLERIALTADSLSRGDMVDRRI 810
>gi|307166495|gb|EFN60580.1| Replication factor C subunit 1 [Camponotus floridanus]
Length = 935
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 101/401 (25%), Positives = 169/401 (42%), Gaps = 71/401 (17%)
Query: 161 DVLLQKVEQEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNRE 220
DV + K + A K LN S E +S S EK + NS+ LS++
Sbjct: 315 DVFITKAKSNA-KKILNKSEEDKSPLSKEEKSA----------STNSYD--LSEKINICA 361
Query: 221 VLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN-KKQNDSSFTRKNRGNRWSNGNF 279
++ + D+ + E S + L R T+ Q +Q D S R + W +
Sbjct: 362 PVIPKQTLDAINYSQETTSIGSQPLVEKYRPKTMKQIIGQQGDKSCAR--NLHVWLRDWY 419
Query: 280 RNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHV 339
+N N + +N +SK T K LL GPPG+GKTT V K GY +
Sbjct: 420 KNRQNSKLKNGSSK-----------QTHGESFKAALLSGPPGVGKTTTVQVVCKELGYDL 468
Query: 340 VEVNASDDRSSSTIENKILDVVQMNSVMAD---------SRPKCLVIDEIDGALG-DGKG 389
VE NASD R+ + ++ ++ ++ N+ M D + L++DE+DG G + +G
Sbjct: 469 VEFNASDTRNKTLLKEEVSGLLS-NTTMKDYVTGTKQKTTSKHVLLMDEVDGMAGNEDRG 527
Query: 390 AVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRS 449
++ +L ++ NT P+ICICND + +++
Sbjct: 528 GLQELLTLIK-----NTE-------------------------VPIICICNDRFNTRVKT 557
Query: 450 LRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLD 509
+ + F + V ++ S + +C E++K + L L E T DIR +N L+FL
Sbjct: 558 ISMHSYDLRFHKLRVEQIRSAMLSLCYKENIKMPTEDLNRLIESTNYDIRQVINHLEFLG 617
Query: 510 KKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRL 550
+ + +D + K+ FD+ K F + K +
Sbjct: 618 GRTPHVEAID---KKHSNKNFKLGPFDVIKMAFNAEEQKNM 655
>gi|397524499|ref|XP_003832228.1| PREDICTED: replication factor C subunit 1 [Pan paniscus]
Length = 1148
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 142/363 (39%), Gaps = 101/363 (27%)
Query: 194 VHEQLWVDKYAPNSFTELLS---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRR 250
V LWVDKY P S ++ D+ ++L WL+ W +S+SE+ ++
Sbjct: 581 VENLLWVDKYKPTSLKTIIGQQGDQSCANKLLRWLRNWQ--------KSSSED-----KK 627
Query: 251 HSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPE 310
H+ F+ K+ G+ +
Sbjct: 628 HAA-------KFGKFSGKDDGSSF------------------------------------ 644
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-- 368
K LL GPPG+GKTT A + + GY VE+NASD RS S+++ + + + S+
Sbjct: 645 -KAALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKSSLKAIVAESLNNTSIKGFY 703
Query: 369 -------DSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
S L++DE+DG G + +G ++ ++ ++ + KI
Sbjct: 704 SNGAASSVSTKHALIMDEVDGMAGNEDRGGIQELIGLI-----------------KHTKI 746
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
P+IC+CND P +RSL F +P V ++ + I E +
Sbjct: 747 -------------PIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAMMSIAFKEGL 793
Query: 481 KTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV-VGRKDMSRSAFDIWK 539
K A+ + DIR L+ L + + L + +KD+ FD+ +
Sbjct: 794 KIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRAKKDIKMGPFDVAR 853
Query: 540 EIF 542
++F
Sbjct: 854 KVF 856
>gi|254583820|ref|XP_002497478.1| ZYRO0F06446p [Zygosaccharomyces rouxii]
gi|238940371|emb|CAR28545.1| ZYRO0F06446p [Zygosaccharomyces rouxii]
Length = 841
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 119/507 (23%), Positives = 208/507 (41%), Gaps = 83/507 (16%)
Query: 301 KKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDV 360
KK+ G + +L GPPG+GKTT AH+ A GY V+E NASD RS S + + +
Sbjct: 315 KKSGRDGSGVFRAAMLYGPPGIGKTTAAHLVANELGYDVLEKNASDVRSKSLLNVGVKNA 374
Query: 361 VQMNSVMA-----------DSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKE 409
+ SVM +S+ +V+DE+DG G +G V + +
Sbjct: 375 LDNMSVMGFFENKHNAQDDNSKKFVIVMDEVDGMSGGDRGGVGQLAQF------------ 422
Query: 410 NVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVS 469
C+K L P+I ICN+ P +R + F +P + + +
Sbjct: 423 ----------------CRKT--LTPMILICNERNIPKMRPFDRTCLDIQFRRPDANSIKA 464
Query: 470 RLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIG--SQVVGR 527
RL I E K + L + T DIR +N L + K + +N +I SQ
Sbjct: 465 RLMTIAVRERFKLDPNIVDKLVQATRGDIRQIINLLSTVSKTTKTINHENITEISQAW-E 523
Query: 528 KDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHEN 587
K+++ FDI ++ R ++ S + N++++ D+D + EN
Sbjct: 524 KEIALKPFDIAHKLLDGR---IYTDAGSQTFNLNDKIALYFD------DFDFAPLMVQEN 574
Query: 588 ILQ-----LQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVS 642
+ LQ + + K D + S+L+ I ++Q L+ P +H ++S
Sbjct: 575 YVNTRPSLLQSGETHLEAIAKAADSISMSNLVETKIRSSEQ--LWSLLP-----LHAVLS 627
Query: 643 QIQKPNLEWPKSYQRYRNAFMEKMDIFKSW---HSKIPPY--ISRHLSTESLVEDSISPL 697
+ +P S + +++ F SW +SK Y + + L + + S + +
Sbjct: 628 SV------YPAS--KIAGQMAGRIN-FTSWLGQNSKTNKYYRLLQELQYHTRLSTSTNKV 678
Query: 698 -LHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDV 756
L + P L+ L +S + + ++ M Y LT ++ D ++ L S D
Sbjct: 679 GLRLEYLPALKKRLLDPISKEGSEGIDAVIKVMDDYYLTKEDW--DTIMEFLIGPASTDA 736
Query: 757 STLSFDPPINEFITFKGYRSNHYVLAL 783
+ P+ T K Y S + +A+
Sbjct: 737 ALKKIPTPVKTAFTRK-YNSTTHPVAI 762
>gi|109074009|ref|XP_001091287.1| PREDICTED: replication factor C subunit 1 isoform 3 [Macaca
mulatta]
Length = 1148
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 139/365 (38%), Gaps = 105/365 (28%)
Query: 194 VHEQLWVDKYAPNSFTELLS---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRR 250
V LWVDKY P S ++ D+ ++L WL+ W
Sbjct: 581 VENLLWVDKYKPTSLKTIIGQQGDQSCANKLLRWLRNW---------------------- 618
Query: 251 HSTISQNKKQND--SSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGP 308
H + S++KK F+ K+ G+ +
Sbjct: 619 HKSSSEDKKHAAKFGKFSGKDDGSSF---------------------------------- 644
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA 368
K LL GPPG+GKTT A + + GY VE+NASD RS S+++ + + + S+
Sbjct: 645 ---KAALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKSSLKAIVAESLSNTSIKG 701
Query: 369 ---------DSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPE 418
S L++DE+DG G + +G ++ ++ ++ +
Sbjct: 702 FYSNGAASSVSTKHALIMDEVDGMAGNEDRGGIQELIGLI-----------------KHT 744
Query: 419 KISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNE 478
KI P+IC+CND P +RSL F +P V ++ + I E
Sbjct: 745 KI-------------PIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAMMSIAFKE 791
Query: 479 SMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV-VGRKDMSRSAFDI 537
+K A+ + DIR L+ L + + L + +KD+ FD+
Sbjct: 792 GLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRAKKDIKMGPFDV 851
Query: 538 WKEIF 542
+++F
Sbjct: 852 ARKVF 856
>gi|126466117|ref|YP_001041226.1| replication factor C large subunit [Staphylothermus marinus F1]
gi|158513389|sp|A3DNV8.1|RFCL_STAMF RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|126014940|gb|ABN70318.1| replication factor C large subunit [Staphylothermus marinus F1]
Length = 423
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 95/211 (45%), Gaps = 38/211 (18%)
Query: 297 DSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENK 356
+SW K G P +K LL GP G GKT+L AA G +VE+NASD R IE
Sbjct: 34 ESWLK-----GKPSKKAALLYGPAGCGKTSLVEAAANEYGLEIVEMNASDFRRRQDIERI 88
Query: 357 ILDVVQMNSVMADSRPKCLVIDEIDGALGDG-KGAVEVILKMVSAERKSNTAKENVAKED 415
M S+ A R K +++DE+DG G +GA++ IL ++ R
Sbjct: 89 AKTAAFMRSLFA--RGKIILLDEVDGISGTADRGAIDAILHLLEITRY------------ 134
Query: 416 QPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHIC 475
PV+ N+ + L+ LR + + F + S V+ LK IC
Sbjct: 135 ------------------PVVMTANNPWDQKLKPLRDASLMIAFKRLSERDVIIVLKRIC 176
Query: 476 NNESMKTSSIALTTLAEYTECDIRSCLNTLQ 506
E ++ AL +A +E D+RS +N LQ
Sbjct: 177 QLEKLECEDAALREIARRSEGDLRSAINDLQ 207
>gi|452847848|gb|EME49780.1| hypothetical protein DOTSEDRAFT_40924, partial [Dothistroma
septosporum NZE10]
Length = 611
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 41/210 (19%)
Query: 307 GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV 366
G + +++ GPPG+GKTT AH+ AK G+ VVE NASD RS +E + V+ S+
Sbjct: 68 GSGVHRAVMIHGPPGIGKTTAAHLVAKMEGFDVVESNASDTRSKKLVETGLKGVLSTTSL 127
Query: 367 M-----------ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKED 415
M A + CL++DE+DG +G V + +
Sbjct: 128 MGYFSHGADDVEASKKKLCLIMDEVDGMSAGDRGGVGALAAV------------------ 169
Query: 416 QPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHIC 475
CKK + P+I ICND P ++ + F +P+ ++ +R+ I
Sbjct: 170 ----------CKKTQI--PMILICNDRKLPKMKPFDFVTYDLPFRRPTTEQIRARIMTIN 217
Query: 476 NNESMKTSSIALTTLAEYTECDIRSCLNTL 505
E +K + L E + DIR +N +
Sbjct: 218 YREGLKMPVNVINALIEGSGADIRQVVNMV 247
>gi|289192746|ref|YP_003458687.1| AAA ATPase central domain protein [Methanocaldococcus sp. FS406-22]
gi|288939196|gb|ADC69951.1| AAA ATPase central domain protein [Methanocaldococcus sp. FS406-22]
Length = 515
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 147/346 (42%), Gaps = 58/346 (16%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSR 371
K +LL GPPG GKTTLA+ A G+ V+E+NASD RS+S I+ + +S+ +
Sbjct: 40 KPILLVGPPGCGKTTLAYALANDYGFEVIELNASDKRSASVIKKVVGHAATSSSIFG--K 97
Query: 372 PKCLVIDEIDGALG--DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKA 429
+++DE+DG G D G E+I K KKA
Sbjct: 98 KFLIILDEVDGISGKEDAGGVSELI-----------------------------KVIKKA 128
Query: 430 SLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTT 489
P+I ND YAPA+R+L +V + V LK I E + L
Sbjct: 129 K--NPIILTANDAYAPAIRNLLPYVEVIQLNPVHTNSVYKVLKKIAQKEGLDVDDKTLKM 186
Query: 490 LAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKR 549
+A+++ D+RS +N L+ L ++ + ++ RK + + FD + I KT
Sbjct: 187 IAQHSAGDLRSAINDLEALALSGDL--SYEAAQKLPDRKREA-NIFDALRVIL---KTTH 240
Query: 550 LRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLG 609
+ ++ NV DV+ + I EN+ + +Y P + + + L
Sbjct: 241 YGIATTALMNVDE-------------TPDVVIEWIAENVPK-EYEKPE--EVARAFEYLS 284
Query: 610 NSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSY 655
+D +MR Q + Y L +T +S+ +K P SY
Sbjct: 285 KADRYLGRVMRRQNYSFWKYATTL-MTAGVALSKHEKYRKWTPYSY 329
>gi|449299008|gb|EMC95022.1| hypothetical protein BAUCODRAFT_35017 [Baudoinia compniacensis UAMH
10762]
Length = 782
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 141/356 (39%), Gaps = 78/356 (21%)
Query: 307 GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV 366
G + +++ GPPG+GKTT AH+ AK GY +VE NASD RS ++ + V+ S+
Sbjct: 327 GSGTHRAVMIHGPPGIGKTTAAHLVAKLEGYDIVESNASDTRSKKLVDTGLKGVLSTTSL 386
Query: 367 M-----------ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKED 415
M A + L++DE+DG +G V + +
Sbjct: 387 MGYFASGTDSVEASKKKLVLIMDEVDGMSAGDRGGVGALAAV------------------ 428
Query: 416 QPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHIC 475
CKK + P+I ICND P ++ + F +P+ ++ SR+ I
Sbjct: 429 ----------CKKTQI--PMILICNDRKLPKMKPFDFVTYDLAFRRPTTDQIRSRISTIA 476
Query: 476 NNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRS-- 533
E +K + + L E + DIR +N + + L + KDMS++
Sbjct: 477 FREGLKMPANVINALIEGSGADIRQVVNMISTAKLDSQTLTYEE-------GKDMSKAWE 529
Query: 534 ---AFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQ 590
W + + + S+ N E F D++ + EN L
Sbjct: 530 KHIVLRPWDMVAKILGGGLFNPAAKSTLNDKQELYF--------NDHEFAPLMLQENYLG 581
Query: 591 L------QYHDPVMLKTV-------KCLDCLGNSDLMHQYIMRTQQ----MPLYVY 629
QY+D ++++ K D + + DL+ + I +QQ MP + +
Sbjct: 582 TSPQRANQYNDNPKIRSLAVLDLVSKAADSISDGDLVDRMIHGSQQQWALMPTHAF 637
>gi|355687229|gb|EHH25813.1| Activator 1 subunit 1, partial [Macaca mulatta]
Length = 1147
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 139/365 (38%), Gaps = 105/365 (28%)
Query: 194 VHEQLWVDKYAPNSFTELLS---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRR 250
V LWVDKY P S ++ D+ ++L WL+ W
Sbjct: 580 VENLLWVDKYKPTSLKTIIGQQGDQSCANKLLRWLRNW---------------------- 617
Query: 251 HSTISQNKKQND--SSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGP 308
H + S++KK F+ K+ G+ +
Sbjct: 618 HKSSSEDKKHAAKFGKFSGKDDGSSF---------------------------------- 643
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA 368
K LL GPPG+GKTT A + + GY VE+NASD RS S+++ + + + S+
Sbjct: 644 ---KAALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKSSLKAIVAESLSNTSIKG 700
Query: 369 ---------DSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPE 418
S L++DE+DG G + +G ++ ++ ++ +
Sbjct: 701 FYSNGAASSVSTKHALIMDEVDGMAGNEDRGGIQELIGLI-----------------KHT 743
Query: 419 KISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNE 478
KI P+IC+CND P +RSL F +P V ++ + I E
Sbjct: 744 KI-------------PIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAMMSIAFKE 790
Query: 479 SMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV-VGRKDMSRSAFDI 537
+K A+ + DIR L+ L + + L + +KD+ FD+
Sbjct: 791 GLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRAKKDIKMGPFDV 850
Query: 538 WKEIF 542
+++F
Sbjct: 851 ARKVF 855
>gi|294656132|ref|XP_458382.2| DEHA2C15994p [Debaryomyces hansenii CBS767]
gi|199430883|emb|CAG86464.2| DEHA2C15994p [Debaryomyces hansenii CBS767]
Length = 915
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 95/209 (45%), Gaps = 48/209 (22%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM---- 367
+ L+ GPPG+GKT+ AH+ A + G+ V+E NASD RS S + + I V+ SV+
Sbjct: 411 RACLISGPPGIGKTSAAHLVANNLGFDVLEKNASDVRSKSLLNSNIKSVLNNTSVVGFFK 470
Query: 368 --------ADSRPKCLVIDEIDG-ALGD--GKGAVEVILKMVSAERKSNTAKENVAKEDQ 416
A+ + CL++DE+DG + GD G GA+ ++
Sbjct: 471 HRNDVEQHANDKKFCLIMDEVDGMSSGDHGGAGALSAFCRITKM---------------- 514
Query: 417 PEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICN 476
P+I ICND P +R+ ++ F +P+ + V +RL I +
Sbjct: 515 -----------------PMILICNDKSLPKMRTFDRVTYDLAFRRPTETEVKARLMTIAH 557
Query: 477 NESMKTSSIALTTLAEYTECDIRSCLNTL 505
E +K + L + T DIR +N L
Sbjct: 558 REKIKLDPTIIGQLVQVTNHDIRQMINLL 586
>gi|119613328|gb|EAW92922.1| replication factor C (activator 1) 1, 145kDa, isoform CRA_a [Homo
sapiens]
Length = 1032
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 142/363 (39%), Gaps = 101/363 (27%)
Query: 194 VHEQLWVDKYAPNSFTELLS---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRR 250
V LWVDKY P S ++ D+ ++L WL+ W +S+SE+ ++
Sbjct: 465 VENLLWVDKYKPTSLKTIIGQQGDQSCANKLLRWLRNWQ--------KSSSED-----KK 511
Query: 251 HSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPE 310
H+ F+ K+ G+ +
Sbjct: 512 HAA-------KFGKFSGKDDGSSF------------------------------------ 528
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-- 368
K LL GPPG+GKTT A + + GY VE+NASD RS S+++ + + + S+
Sbjct: 529 -KAALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKSSLKAIVAESLNNTSIKGFY 587
Query: 369 -------DSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
S L++DE+DG G + +G ++ ++ ++ + KI
Sbjct: 588 SNGAASSVSTKHALIMDEVDGMAGNEDRGGIQELIGLI-----------------KHTKI 630
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
P+IC+CND P +RSL F +P V ++ + I E +
Sbjct: 631 -------------PIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAMMSIAFKEGL 677
Query: 481 KTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV-VGRKDMSRSAFDIWK 539
K A+ + DIR L+ L + + L + +KD+ FD+ +
Sbjct: 678 KIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRAKKDIKMGPFDVAR 737
Query: 540 EIF 542
++F
Sbjct: 738 KVF 740
>gi|402466617|gb|EJW02070.1| hypothetical protein EDEG_03494 [Edhazardia aedis USNM 41457]
Length = 453
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 115/242 (47%), Gaps = 35/242 (14%)
Query: 306 TGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNS 365
TG ++ LL G PG+GKTT A V + G+ VVE NASD R+ I +I D + + +
Sbjct: 157 TGKVNKQAALLSGNPGIGKTTSALVVCRDLGFEVVEFNASDVRNKGEISRQIKDRLNVYA 216
Query: 366 VMADS-RPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKK 424
+ + S + + L++DEIDG D G E+ SN
Sbjct: 217 LSSSSIKKRVLIMDEIDGMTSDRGGLAEL----------SNII----------------- 249
Query: 425 GCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSS 484
KK S+ P+ICICND +R+L F + ++V R+K I E
Sbjct: 250 --KKTSV--PIICICNDRSNQKIRTLANYCVDLRFRKLDARQMVPRIKWILEKEGKNIRE 305
Query: 485 IALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQK 544
+ + + + D+R CLNTLQ + +E L+ I ++ RK+ +++ F++ +E+F
Sbjct: 306 NMINEIVKNSNGDLRYCLNTLQNM-CIRETLSHEQI--SLLTRKNTTKNVFEVVRELFTS 362
Query: 545 RK 546
K
Sbjct: 363 GK 364
>gi|325958393|ref|YP_004289859.1| replication factor C large subunit [Methanobacterium sp. AL-21]
gi|325329825|gb|ADZ08887.1| Replication factor C large subunit [Methanobacterium sp. AL-21]
Length = 491
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 125/259 (48%), Gaps = 37/259 (14%)
Query: 314 LLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPK 373
+LL GPPG GKTT+AH+AA ++ E+NASD RS ++N I + S+ D K
Sbjct: 41 ILLIGPPGTGKTTMAHLAANEFSEYI-ELNASDKRSYDILKNTIGESSLSKSLYGDG-LK 98
Query: 374 CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLR 433
+++DE+DG G+ +R A + K+ +
Sbjct: 99 LIILDEVDGIHGN-------------EDRGGTRAINQIVKDGK----------------H 129
Query: 434 PVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEY 493
P+I + ND Y+ L+SL+ + + + +VS LK IC E ++ + LA+
Sbjct: 130 PIIMMANDPYSKRLQSLKPKCNTLIMRKVHTNSIVSLLKKICVKEGVEFEEHVIRNLAKR 189
Query: 494 TECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNS 553
+ D+R+ +N L+ + + +E + D+ +++ KD + FD + + + + KR+R
Sbjct: 190 SNGDLRTAINDLEVIARGQERITSEDL--ELLSSKDDIVNIFDTVRTVLKSKDPKRVR-- 245
Query: 554 VSSSSNVSNEFDFLHSLIS 572
++ V +E F+ +I+
Sbjct: 246 --AAMRVDSEPSFILEIIT 262
>gi|42559517|sp|Q975D4.2|RFCL_SULTO RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|342306207|dbj|BAK54296.1| replication factor C large subunit [Sulfolobus tokodaii str. 7]
Length = 440
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 133/299 (44%), Gaps = 57/299 (19%)
Query: 297 DSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENK 356
+SW K G P K +LL GPPG+GKTTLA A+ + E+NASD R+ + I
Sbjct: 32 ESWLK-----GKPNYKAVLLYGPPGVGKTTLAEALARDYKLELFEMNASDSRNLNDIRT- 85
Query: 357 ILDVVQMNSVMADSRPKCLVIDEIDG--ALGDGKGAVEVILKMVSAERKSNTAKENVAKE 414
+ + + + + K +++DE+DG A D GA++ IL++++ +
Sbjct: 86 MAERASITGTIFGIKGKLILLDEVDGLNARADA-GAIDAILELINKTK------------ 132
Query: 415 DQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHI 474
P+I ND + P+LR LR K+ + + + LK I
Sbjct: 133 ------------------YPIILTANDPWDPSLRPLRNAVKMIELKRLTKYPLKRILKKI 174
Query: 475 CNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSA 534
C E + AL + E +E D R +N LQ + + + +D+ +V RKD
Sbjct: 175 CEAEKITCEDEALDFIIEQSEGDARYAINMLQGVAEGYGRVT-LDMAKNLVRRKDRELDP 233
Query: 535 FDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQY 593
F+ + +F + + +++V+ + + DY+++ + ENI LQY
Sbjct: 234 FEALRGVFWAKYYWQAKSAVTDT----------------QIDYELLMRWLDENI-PLQY 275
>gi|45357885|ref|NP_987442.1| replication factor C large subunit [Methanococcus maripaludis S2]
gi|50400880|sp|Q6M0E9.1|RFCL_METMP RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|45047445|emb|CAF29878.1| replication factor C, large subunit [Methanococcus maripaludis S2]
Length = 486
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 139/336 (41%), Gaps = 71/336 (21%)
Query: 307 GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV 366
G QK +LL GPPG GKTTLA+ A + V+E+NASD R+ I + S+
Sbjct: 35 GGQNQKPILLAGPPGSGKTTLAYAIANDYAFDVIELNASDKRNKDVISQVVGTAATSKSL 94
Query: 367 MADSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKG 425
R +V+DE+DG G D +G V I+K++ EN
Sbjct: 95 TG--RRTLIVLDEVDGLSGNDDRGGVAEIIKVLK-------TAEN--------------- 130
Query: 426 CKKASLLRPVICICNDLYAPALRSLR------QIAKVHVFIQPSVSRVVSRLKHICNNES 479
PVI ND+Y PAL +LR + VH P V L+ I E
Sbjct: 131 --------PVILTANDVYKPALMTLRNSVNLINVGSVHTNSIPPV------LRRIALKEG 176
Query: 480 MKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWK 539
+ + +A ++ D+R+ +N LQ L I + D ++ + +D +S FD +
Sbjct: 177 FEIDEKIIKMIASHSGGDLRAAINDLQSLATGGSI-EIED--AKELPDRDSEKSIFDAMR 233
Query: 540 EIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQ--LQYHDPV 597
I KT + S++ +V + D I + I EN+ + L+Y D
Sbjct: 234 IIM---KTTHYDIATSATRDV-------------KEDIGTIEEWISENLPKEYLKYKD-- 275
Query: 598 MLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPL 633
+ D L SD+ + R Q L+ Y L
Sbjct: 276 ---LAEGYDYLSKSDVFLGRVYRRQYFGLWRYASAL 308
>gi|345328868|ref|XP_001512744.2| PREDICTED: replication factor C subunit 1 [Ornithorhynchus
anatinus]
Length = 1316
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 108/242 (44%), Gaps = 41/242 (16%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV----- 366
K +LL GPPG+GKTT A + + GY VE+NASD RS ++++ + + + S+
Sbjct: 701 KAVLLSGPPGVGKTTTASLVCEELGYSFVELNASDTRSKNSLKEIVAESLNNTSIKGFCS 760
Query: 367 ----MADSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKIS 421
A L++DE+DG G + +G ++ ++ ++ + KI
Sbjct: 761 NGEITAGGGKHALIMDEVDGMAGNEDRGGIQELIGLI-----------------RQTKI- 802
Query: 422 KKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMK 481
P+IC+CND P +RSL F +P V ++ + I E +K
Sbjct: 803 ------------PIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAMMSIAFKEGLK 850
Query: 482 TSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV-VGRKDMSRSAFDIWKE 540
A+ + DIR L+ L K + LN + RKD+ S FD+ ++
Sbjct: 851 IPPPAMNEIILGANQDIRQVLHNLSMWCAKSKALNYDQAKADSNRARKDIKLSPFDVARK 910
Query: 541 IF 542
+F
Sbjct: 911 VF 912
>gi|340623509|ref|YP_004741962.1| replication factor C large subunit [Methanococcus maripaludis X1]
gi|339903777|gb|AEK19219.1| replication factor C large subunit [Methanococcus maripaludis X1]
Length = 486
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 139/336 (41%), Gaps = 71/336 (21%)
Query: 307 GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV 366
G QK +LL GPPG GKTTLA+ A + V+E+NASD R+ I + S+
Sbjct: 35 GGQNQKPILLAGPPGSGKTTLAYAIANDYAFDVIELNASDKRNKDVISQVVGTAATSKSL 94
Query: 367 MADSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKG 425
R +V+DE+DG G D +G V I+K++ EN
Sbjct: 95 TG--RRTLIVLDEVDGLSGNDDRGGVAEIIKVLK-------TAEN--------------- 130
Query: 426 CKKASLLRPVICICNDLYAPALRSLR------QIAKVHVFIQPSVSRVVSRLKHICNNES 479
PVI ND+Y PAL +LR + VH P V L+ I E
Sbjct: 131 --------PVILTANDVYKPALMTLRNSVNLINVGSVHTNSIPPV------LRRIALKEG 176
Query: 480 MKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWK 539
+ + +A ++ D+R+ +N LQ L I + D ++ + +D +S FD +
Sbjct: 177 FEIDEKIIKMIASHSGGDLRAAINDLQSLATGGSI-EIED--AKELPDRDSEKSIFDAMR 233
Query: 540 EIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQ--LQYHDPV 597
I KT + S++ +V + D I + I EN+ + L+Y D
Sbjct: 234 IIM---KTTHYDIATSATRDV-------------KEDIGTIEEWISENLPKEYLKYKD-- 275
Query: 598 MLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPL 633
+ D L SD+ + R Q L+ Y L
Sbjct: 276 ---LAEGYDYLSKSDVFLGRVYRRQYFGLWRYASAL 308
>gi|389860408|ref|YP_006362647.1| replication factor C large subunit [Thermogladius cellulolyticus
1633]
gi|388525311|gb|AFK50509.1| replication factor C large subunit [Thermogladius cellulolyticus
1633]
Length = 427
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 155/353 (43%), Gaps = 55/353 (15%)
Query: 279 FRNSNNLEY-ENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGY 337
+R N E+ + +K + SW++ + G ++K LL GPPG GK++ A G
Sbjct: 11 YRPKNLDEFVDQEEAKKVFISWYEDWKK-GEVKKKAALLYGPPGTGKSSFVQAFAATYGL 69
Query: 338 HVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGA-LGDGKGAVEVILK 396
+ E+NASD R I +++L V + ++ R K + +DE+DG G +E IL+
Sbjct: 70 ELYEMNASDYRRKGDI-DRLLRVTASSGSLS-GRGKLIFLDEVDGLNPKSDAGGLEAILQ 127
Query: 397 MVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKV 456
++ + PV+ ND Y P +R LR ++ +
Sbjct: 128 LIENSK------------------------------HPVVMAANDAYNPNIRPLRDVSLL 157
Query: 457 HVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILN 516
F + VV L IC E ++ AL +A+ +E D+RS +N L+ + + +
Sbjct: 158 IEFKRLREGAVVQLLSRICEKERVRCDKDALDVIAKRSEGDLRSAINDLEAIAEAYGRVT 217
Query: 517 VMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGD 576
++ V +D + F++ + +F + + +++V SS+N+ D
Sbjct: 218 -KELAMSVSTYRDREYAPFEVLRRVFNAKYIFQAKDAV-SSANI---------------D 260
Query: 577 YDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVY 629
YD + I+E+I Y DP + + + L +D+ I+++ L Y
Sbjct: 261 YDTLKVWINEHI-PTYYEDPE--EVSRAFEALSRADVYMGRIIKSGSWDLLSY 310
>gi|363756402|ref|XP_003648417.1| hypothetical protein Ecym_8322 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891617|gb|AET41600.1| Hypothetical protein Ecym_8322 [Eremothecium cymbalariae
DBVPG#7215]
Length = 806
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 121/282 (42%), Gaps = 44/282 (15%)
Query: 277 GNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCG 336
GN N L+ +N Q + K G + +L GPPG+GKTT AH+ A+ G
Sbjct: 230 GNKGAVNKLKNWLTNWAINQQNGFKTPGKDGTGIYRAAMLYGPPGIGKTTAAHLVAQELG 289
Query: 337 YHVVEVNASDDRSSSTIENKILDVVQMNSVMA----------DSRPKCLVI-DEIDGALG 385
Y ++E NASD RS + + + + + + SV+ D+R K ++I DE+DG G
Sbjct: 290 YDILEQNASDVRSKTLLNSGVKNALDNTSVVGFFKNQDANVKDNRNKFVIIMDEVDGMSG 349
Query: 386 DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAP 445
+G V + + C+K S P+I ICN+ P
Sbjct: 350 GDRGGVGQMAQF----------------------------CRKTS--SPLILICNERSLP 379
Query: 446 ALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
+R ++ F +P + +RL I E K + L T DIR +N L
Sbjct: 380 KMRPFDRVVCDIQFRRPDAQSMKARLMTIAVREGFKLDPTVIDQLVAATRGDIRQIINLL 439
Query: 506 QFLDKKKEILNVMDIGSQVVG--RKDMSRSAFDIWKEIFQKR 545
+ K +N D Q+ K+++ +DI +++F+ R
Sbjct: 440 STVSKTTRSIN-HDNSKQISAAWEKNIALKPYDITQKLFEGR 480
>gi|355749220|gb|EHH53619.1| Activator 1 subunit 1 [Macaca fascicularis]
Length = 1166
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 112/526 (21%), Positives = 191/526 (36%), Gaps = 156/526 (29%)
Query: 194 VHEQLWVDKYAPNSFTELLS---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRR 250
V LWVDKY P S ++ D+ ++L WL+ W
Sbjct: 599 VENLLWVDKYKPTSLKTIIGQQGDQSCANKLLRWLRNW---------------------- 636
Query: 251 HSTISQNKKQND--SSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGP 308
H + S++KK F+ K+ G+ +
Sbjct: 637 HKSSSEDKKHAAKFGKFSGKDDGSSF---------------------------------- 662
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA 368
K LL GPPG+GKTT A + + GY VE+NASD RS S+++ + + + S+
Sbjct: 663 ---KAALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKSSLKAIVAESLSNTSIKG 719
Query: 369 ---------DSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPE 418
S L++DE+DG G + +G ++ ++ ++ +
Sbjct: 720 FYSNGAASSVSTKHALIMDEVDGMAGNEDRGGIQELIGLI-----------------KHT 762
Query: 419 KISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNE 478
KI P+IC+CND P +RSL F +P V ++ + I E
Sbjct: 763 KI-------------PIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAMMSIAFKE 809
Query: 479 SMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV-VGRKDMSRSAFDI 537
+K A+ + DIR L+ L + + L + +KD+ FD+
Sbjct: 810 GLKIPPPAMNEIILGANQDIRQVLHNLSMWCAQSKALTYDQAKADSHRAKKDIKMGPFDV 869
Query: 538 WKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPV 597
+++F + + S+ S++ F H DY + + EN + ++ PV
Sbjct: 870 ARKVFAAGE-ETAHMSLMDKSDL-----FFH-------DYSIAPLFVQENYIHVK---PV 913
Query: 598 ---------MLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPN 648
++ K D + + DL+ I Q L P AI L ++ +
Sbjct: 914 AAGGDMKKHLMLLSKAADSICDGDLVDSQIRSKQNWSLL---PTQAIYASVLPGELMR-- 968
Query: 649 LEWPKSYQRYRNAFMEKMDIFKSW---------HSKIPPYISRHLS 685
FM + F W H +I ++ H+S
Sbjct: 969 ------------GFMTQFPTFPGWLGKHSSTGKHGRIVQDLALHMS 1002
>gi|242209061|ref|XP_002470379.1| predicted protein [Postia placenta Mad-698-R]
gi|220730549|gb|EED84404.1| predicted protein [Postia placenta Mad-698-R]
Length = 697
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 90/199 (45%), Gaps = 35/199 (17%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKIL----DVVQMNSVM 367
+ +L+ GPPG+GKTT AH+ AK G+ +E+NASD RS +E D N+V
Sbjct: 195 RAVLITGPPGIGKTTSAHLCAKLQGFTPIELNASDARSKKLVEVGSFTCSSDERTSNAVG 254
Query: 368 ADSRPK-CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGC 426
K CL++DE+DG +G V + ++ RK+
Sbjct: 255 VTITDKTCLIMDEVDGMSAGDRGGVGALAALI---RKTKI-------------------- 291
Query: 427 KKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIA 486
P+ICI ND AP ++ L A F +P + + SR+ I E MK +
Sbjct: 292 -------PIICIANDRGAPKMKPLSNAAYNLTFRRPEATTIRSRILSIAFKEKMKIPANV 344
Query: 487 LTTLAEYTECDIRSCLNTL 505
+ L E + DIR LN L
Sbjct: 345 IDQLIEGAQSDIRQVLNML 363
>gi|432109336|gb|ELK33597.1| Replication factor C subunit 1 [Myotis davidii]
Length = 1193
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 111/521 (21%), Positives = 195/521 (37%), Gaps = 154/521 (29%)
Query: 198 LWVDKYAPNSFTELLS---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTI 254
LWVDKY P S ++ D+ ++L WL+ W +S SE+ R+H+
Sbjct: 629 LWVDKYKPTSLKTIIGQQGDQSCANKLLRWLQNWH--------KSPSED-----RKHAKF 675
Query: 255 SQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVL 314
+ F K+ G+ + K
Sbjct: 676 GK--------FAGKDDGSSF-------------------------------------KAA 690
Query: 315 LLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA------ 368
LL GPPG+GKTT A + + G+ VE+NASD RS +++++ + + + S+
Sbjct: 691 LLSGPPGVGKTTTASLVCQELGFSYVELNASDTRSKNSLKDVVAESLNNTSIKGFYSSGA 750
Query: 369 ---DSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKK 424
S L++DE+DG G + +G ++ ++ ++ + KI
Sbjct: 751 APSVSMKHALIMDEVDGMAGNEDRGGIQELIGLI-----------------KHTKI---- 789
Query: 425 GCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSS 484
P+IC+CND P +RSL F +P V ++ + I E +K
Sbjct: 790 ---------PIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAMMSIAFKEGLKIPP 840
Query: 485 IALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVV-GRKDMSRSAFDIWKEIFQ 543
A+ + + DIR L+ L + + L + +KD+ FD+ +++F
Sbjct: 841 PAMNEIILGSNQDIRQVLHNLSMWCARSKALTYDQAKADSQRAKKDIKLGPFDVARKVFA 900
Query: 544 KRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPV------ 597
+ + S V F H DY + + EN + ++ PV
Sbjct: 901 AGE------ETAHMSLVDKSDLFFH-------DYSIAPLFVQENYIHVK---PVAAGGDI 944
Query: 598 ---MLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKS 654
++ + D + + DL+ + I Q L P AI L ++ +
Sbjct: 945 KKHLMLLSRAADSICDGDLVDRQIRSKQNWSLL---PTQAIYASVLPGELMR-------- 993
Query: 655 YQRYRNAFMEKMDIFKSWHSKIPPYISRHLST---ESLVED 692
+M + F SW + +H ST + LV+D
Sbjct: 994 ------GYMTQFPTFPSW-------LGKHSSTGRHDRLVQD 1021
>gi|395856640|ref|XP_003800730.1| PREDICTED: replication factor C subunit 1 [Otolemur garnettii]
Length = 1143
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 140/363 (38%), Gaps = 101/363 (27%)
Query: 194 VHEQLWVDKYAPNSFTELLS---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRR 250
V LWVDKY P S ++ D+ ++L WL+ W S+SE+ ++
Sbjct: 577 VENLLWVDKYKPTSLKTIIGQQGDQSCANKLLRWLRNWH--------ESSSED-----KK 623
Query: 251 HSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPE 310
H+T F K+ G+ +
Sbjct: 624 HAT-------KFGKFAGKDDGSGF------------------------------------ 640
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-- 368
K LL GPPG+GKTT A + + GY VE+NASD RS +T++ + + + S+
Sbjct: 641 -KAALLSGPPGVGKTTTASLVCQELGYTYVELNASDTRSKNTLKAVVAESLDNTSIKGFY 699
Query: 369 -------DSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
S L++DE+DG G + +G ++ ++ ++ + KI
Sbjct: 700 SGGAASSGSMKHALLMDEVDGMAGSEDRGGIQELIGLI-----------------KHTKI 742
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
P+IC+CND P +RSL F +P V ++ + I E +
Sbjct: 743 -------------PIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAMMSIAFKEGL 789
Query: 481 KTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV-VGRKDMSRSAFDIWK 539
K A+ + DIR L+ L + L + +KD+ FD+ +
Sbjct: 790 KIPPPAMNEIILGANQDIRQVLHNLSMWCAGNKALTYDQAKADSHRAKKDIKLGPFDVAR 849
Query: 540 EIF 542
++F
Sbjct: 850 KVF 852
>gi|315425404|dbj|BAJ47069.1| replication factor C large subunit [Candidatus Caldiarchaeum
subterraneum]
gi|343484217|dbj|BAJ49871.1| replication factor C large subunit [Candidatus Caldiarchaeum
subterraneum]
Length = 409
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 133/338 (39%), Gaps = 66/338 (19%)
Query: 298 SWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKI 357
W K G P +K LL GP G+GKT+L H A GY V+E NASD R+ IE +
Sbjct: 33 GWEK-----GKPSKKAALLYGPAGVGKTSLVHAYASEKGYEVIETNASDFRTRENIERIV 87
Query: 358 LDVVQMNSVMADSRPKCLVIDEIDG--ALGDGKGAVEVILKMVSAERKSNTAKENVAKED 415
M S+ R K +++DE+DG A D GAV + ++S K +V
Sbjct: 88 GAASGMASLTMGQR-KIILVDEVDGIDARADA-GAVTSLADIIS--------KTHV---- 133
Query: 416 QPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHIC 475
PV+ + ND + P L LR + F + V + LK I
Sbjct: 134 ------------------PVVLVANDPWDPRLAPLRDACLMIQFRRIPKPSVAAHLKKIA 175
Query: 476 NNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAF 535
E+++ L + E +E D+RS +N LQ E+ V G +D F
Sbjct: 176 AAENVRVPEDVLRRIVENSEGDLRSAINDLQMASAALEM-------GLVTGSRDRKDEIF 228
Query: 536 DIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHD 595
IF + S +++ + D D+ + I EN Q
Sbjct: 229 TALATIFNAK-------SFNTAQEAARNIDI---------DHSELMQWILEN--APQQLS 270
Query: 596 PVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPL 633
P L + L+ L +DL Q I Q L Y P+
Sbjct: 271 PTDL--AEALENLAKADLYLQRINTRQNWQLLRYAVPM 306
>gi|50547051|ref|XP_500995.1| YALI0B16918p [Yarrowia lipolytica]
gi|49646861|emb|CAG83248.1| YALI0B16918p [Yarrowia lipolytica CLIB122]
Length = 952
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 158/380 (41%), Gaps = 74/380 (19%)
Query: 283 NNLEYENSNSKGIQ------DSWH-------KKTRSTGPPEQKVLLLCGPPGLGKTTLAH 329
NNL + N + ++WH K+ G + +LL GPPG+GKTT AH
Sbjct: 402 NNLNHVCGNKGAVTKLQNWLNNWHDNAKHGFKQPGKDGFGIYRAVLLSGPPGIGKTTAAH 461
Query: 330 VAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA--------DSRPKCLVIDEID 381
+ A GY V+E NASD RS + + + S+M + C+++DE+D
Sbjct: 462 LVANLAGYDVIENNASDVRSKKLLAQDVSSALTNTSIMGFMSSAKSSKEKKICMIMDEVD 521
Query: 382 GALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICND 441
G +G V + + C+ + P+I ICND
Sbjct: 522 GMSAGDRGGVGQMAAL----------------------------CRTTEV--PIILICND 551
Query: 442 LYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSC 501
P +R ++ F + +++R+ IC+ E +K S+ L + DIR
Sbjct: 552 KGLPKMRPFDRVTLDIPFRRMDPKAILARMMTICHQEKIKISAPVLEQVIAGCNSDIRQI 611
Query: 502 LNTLQFLDKKKEILNV-MDIGSQVVG--RKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSS 558
+N L + + + ++ G ++ K++ S FDI ++ + SS +
Sbjct: 612 INLLSTYARNQNEGGLDIESGKKMTQSWEKNVVLSPFDITGKLLSGGLW-----APSSKA 666
Query: 559 NVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQY-----HDPVMLKTVKCLDCLGNSDL 613
++++ + + D+D + I EN L +Q + + KT+ + + + DL
Sbjct: 667 TLNDKIELYFN------DHDFVPLMIQENYLNVQPSGGGDNKERLRKTLAAAESISDGDL 720
Query: 614 MHQYIMRTQQ----MPLYVY 629
+ + I +QQ MPL+ +
Sbjct: 721 VDKMIHGSQQHWSLMPLHGF 740
>gi|405119275|gb|AFR94048.1| purine nucleotide binding protein [Cryptococcus neoformans var.
grubii H99]
Length = 1003
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 152/359 (42%), Gaps = 75/359 (20%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIEN------KILD------ 359
+ +L+ GPPG+GKTT AH+ AK GY +E+NASD RS IEN K LD
Sbjct: 472 RAVLISGPPGIGKTTSAHLMAKEAGYIPLELNASDTRSKKLIENETNVDNKSLDGFFKGQ 531
Query: 360 -VVQMNS--VMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQ 416
V ++N+ + DSR CL++DE+DG +G V + ++
Sbjct: 532 GVGEINAAGLKIDSR-TCLIMDEVDGMSAGDRGGVGALNTLI------------------ 572
Query: 417 PEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICN 476
KK + P+I ICND ++ L+ F +P + + SR+ I +
Sbjct: 573 ----------KKTKI--PMILICNDRTLQKMKPLQSTTFNMTFRRPQPNEIRSRIMSILH 620
Query: 477 NESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV--VGRKDMSRSA 534
E +K + L + DIR LN L K +N D G + V K+ +
Sbjct: 621 KEKLKIPPNVVDELVKGVNSDIRQVLNMLSTFKLGKSEMN-FDEGKHLVKVNEKNTIMTP 679
Query: 535 FDIWKEI-----FQKRKTKRLRNSVSSSSNVSNEFDFL------HSLISNRGDYDVIFDG 583
F I ++ F K + L + + ++F F+ H L +N + + DG
Sbjct: 680 FTIIDKLTGPYAFSKNSKETLGDRMEL---YFHDFSFVPLFMQEHYLKTNPTALNNL-DG 735
Query: 584 IHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQ----MPLYVYQPPLAITVH 638
+N+ L+ K D + + DL+ + I ++Q +PL+ + +H
Sbjct: 736 PEKNLKHLEL-------VSKAADSISDGDLIDRMIHGSEQHWSLLPLHAVASTVKPAMH 787
>gi|403418247|emb|CCM04947.1| predicted protein [Fibroporia radiculosa]
Length = 972
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 92/206 (44%), Gaps = 42/206 (20%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRS------SSTIENKILDVVQMNS 365
+ +L+ GPPG+GKTT AH+ AK G+ +E+NASD RS S+ I N LD
Sbjct: 449 RAVLITGPPGIGKTTSAHMCAKLEGFTPIELNASDARSKKLVENSTNIANTSLDGWMTGG 508
Query: 366 VMADSR------PKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEK 419
++ CL++DE+DG +G V + ++ RK+
Sbjct: 509 TATNAAGVTITDKTCLIMDEVDGMSAGDRGGVGALSALI---RKTKI------------- 552
Query: 420 ISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNES 479
P+ICI ND A L+ L +A + +P V+ + SR+ I E
Sbjct: 553 --------------PIICIANDRGALKLKPLANVAFNLTYRKPEVNAIRSRILSIAFKEK 598
Query: 480 MKTSSIALTTLAEYTECDIRSCLNTL 505
MK + + L E + DIR LN L
Sbjct: 599 MKVPANVIDQLIEGAQSDIRQVLNML 624
>gi|327273243|ref|XP_003221390.1| PREDICTED: replication factor C subunit 1-like [Anolis carolinensis]
Length = 1124
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 122/589 (20%), Positives = 212/589 (35%), Gaps = 158/589 (26%)
Query: 198 LWVDKYAPNSFTELLS---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTI 254
LWVDKY P + ++ D+ ++L WL+ W H
Sbjct: 565 LWVDKYRPTTLKTVIGQQGDQSCANKLLRWLRNW----------------------HKNT 602
Query: 255 SQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVL 314
S NK S F K+ G + K
Sbjct: 603 SGNKHVKSSKFGSKDDGASF-------------------------------------KAA 625
Query: 315 LLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA------ 368
LL GPPG+GKTT A + + VE+NASD R+ ++++ + + + S+
Sbjct: 626 LLSGPPGVGKTTTASLVCEELNLSYVELNASDTRNKNSLKEVVAESLNNTSIKGFCSGAS 685
Query: 369 --DSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKG 425
S L++DE+DG G + +G ++ ++ ++ +
Sbjct: 686 STVSTKHVLIMDEVDGMAGNEDRGGIQELIDLIKHTK----------------------- 722
Query: 426 CKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSI 485
P+IC+CND P +RSL F +P V ++ + I E +K
Sbjct: 723 -------VPIICMCNDRNHPKIRSLVHYCFDLRFYRPRVEQIKGAMMSIAYKEGLKIPPP 775
Query: 486 ALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVV-GRKDMSRSAFDIWKEIFQK 544
A+ + DIR L+ L + + L + +KD+ FD+ +++F
Sbjct: 776 AMNEIILAANQDIRQVLHNLSMWSARNKTLTYDGVKEDASKAKKDIKLGPFDVVRKVFAT 835
Query: 545 -RKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQ-------YHDP 596
+T R+ S + F H DY + + EN + +Q
Sbjct: 836 GEETSRM-------SLIDKADLFFH-------DYSLSPLFVQENYIHVQPAASGNDMKKH 881
Query: 597 VMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQ 656
+ML + K D + + DL+ + I Q L P AI L ++ +
Sbjct: 882 LMLLS-KTADSICDGDLVDRQIRSQQNWSLL---PTQAIYSSVLPGELMR---------- 927
Query: 657 RYRNAFMEKMDIFKSW---------HSKIPPYISRHLSTESLVEDSISPL--LHILSPPT 705
+M + F SW H ++ +S H+S + L L L
Sbjct: 928 ----GYMSQFPSFPSWLGKFSSTGKHDRLIQELSMHMSLRTHASKRAVNLEYLSYLRDAI 983
Query: 706 LRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSH 754
+RP++ HL + + ++ M SYSL ++ +S + + G + S
Sbjct: 984 VRPLS-HLGT----EGVHDAIAVMDSYSLLKEDVESIMEMTSWGGKPSE 1027
>gi|4103934|gb|AAD01890.1| replication factor C [Rattus norvegicus]
Length = 1104
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 145/361 (40%), Gaps = 106/361 (29%)
Query: 198 LWVDKYAPNSFTELLS---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTI 254
LWVDKY P S ++ D+ ++L WL+ W +S+ EE ++H+
Sbjct: 569 LWVDKYKPTSLKNIIGQQGDQSCANKLLRWLRNWH--------KSSPEE-----KKHAKF 615
Query: 255 SQNKKQND-SSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKV 313
+ ++D SSF K
Sbjct: 616 GKVASKDDGSSF----------------------------------------------KA 629
Query: 314 LLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV----MAD 369
LL GPPG+GKTT A + + GY VE+NASD RS ++++ + + + S+ +
Sbjct: 630 ALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKNSLKAIVAESLNNTSIKGFYTSG 689
Query: 370 SRPK-----CLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKK 423
+ P L++DE+DG G + +G ++ ++ ++ + KI
Sbjct: 690 ASPSVSARHALIMDEVDGMAGNEDRGGIQELIGLI-----------------KHTKI--- 729
Query: 424 KGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTS 483
P+IC+CND P +RSL F +P V ++ S + I E +K
Sbjct: 730 ----------PIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKSAMLSIAFKEGLKIP 779
Query: 484 SIALTTLAEYTECDIRSCLNTLQFLDKKKEILNV--MDIGSQVVGRKDMSRSAFDIWKEI 541
A+ + D+R L+ L + ++L SQ +KD+ FD+ +++
Sbjct: 780 PPAMNEIILGANQDVRQVLHNLSMWCAQSKVLTYDQAKADSQRA-KKDIRLGPFDVTRKV 838
Query: 542 F 542
F
Sbjct: 839 F 839
>gi|238882346|gb|EEQ45984.1| activator 1 95 kDa subunit [Candida albicans WO-1]
Length = 890
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 125/280 (44%), Gaps = 46/280 (16%)
Query: 302 KTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVV 361
K ++ P + +L+ GPPG+GKT+ AH+ AK G+ ++E NASD RS S + + ++
Sbjct: 377 KGNASDPDSFRAVLISGPPGIGKTSAAHLVAKSLGFDIIERNASDVRSKSLLNANVKSIL 436
Query: 362 QMNSVMA------------DSRPKCLVIDEIDG-ALGDGKGAVEVILKMVSAERKSNTAK 408
SV+ +++ C+++DE+DG + GD GA +
Sbjct: 437 NNTSVVGYFKHRGDTEKNSNNKRFCIIMDEVDGMSSGDHGGAGAL--------------- 481
Query: 409 ENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVV 468
+ CK S+ P+I ICND P +R+ + F +PS + V
Sbjct: 482 --------------SQFCKITSM--PMILICNDKSLPKMRTFDRTTYDLPFRRPSENEVK 525
Query: 469 SRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGS-QVVGR 527
SRL I E +K + L + T DIR +N L + K ++ + + + +
Sbjct: 526 SRLMTIAFREKVKLDPSVIGQLVQATSNDIRQMINLLSTVSKTQKQIGANSMKEVKESWQ 585
Query: 528 KDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVS-NEFDF 566
K + FDI + R+S++ N+ N+FDF
Sbjct: 586 KQVVLKPFDIAGRLLNSGIWSDPRSSLNDKLNLYFNDFDF 625
>gi|315427366|dbj|BAJ48976.1| replication factor C large subunit [Candidatus Caldiarchaeum
subterraneum]
Length = 409
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 133/338 (39%), Gaps = 66/338 (19%)
Query: 298 SWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKI 357
W K G P +K LL GP G+GKT+L H A GY V+E NASD R+ IE +
Sbjct: 33 GWEK-----GKPSKKAALLYGPAGVGKTSLVHAYAYEKGYEVIETNASDFRTRENIERIV 87
Query: 358 LDVVQMNSVMADSRPKCLVIDEIDG--ALGDGKGAVEVILKMVSAERKSNTAKENVAKED 415
M S+ R K +++DE+DG A D GAV + ++S K +V
Sbjct: 88 GAASGMASLTMGQR-KIILVDEVDGIDARADA-GAVTSLADIIS--------KTHV---- 133
Query: 416 QPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHIC 475
PV+ + ND + P L LR + F + V + LK I
Sbjct: 134 ------------------PVVLVANDPWDPRLAPLRDACLMIQFRRIPKPSVAAHLKKIA 175
Query: 476 NNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAF 535
E+++ L + E +E D+RS +N LQ E+ V G +D F
Sbjct: 176 AAENVRVPEDVLRRIVENSEGDLRSAINDLQMASAALEM-------GLVTGSRDRKDEIF 228
Query: 536 DIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHD 595
IF + S +++ + D HS + I EN Q
Sbjct: 229 TALATIFNAK-------SFNTAQEAARNIDIDHS---------ELMQWILEN--APQQLS 270
Query: 596 PVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPL 633
P L + L+ L +DL Q I Q L Y P+
Sbjct: 271 PTDL--AEALENLAKADLYLQRINTRQNWQLLRYAVPM 306
>gi|15920689|ref|NP_376358.1| replication factor C large subunit [Sulfolobus tokodaii str. 7]
Length = 413
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 133/299 (44%), Gaps = 57/299 (19%)
Query: 297 DSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENK 356
+SW K G P K +LL GPPG+GKTTLA A+ + E+NASD R+ + I
Sbjct: 5 ESWLK-----GKPNYKAVLLYGPPGVGKTTLAEALARDYKLELFEMNASDSRNLNDIRT- 58
Query: 357 ILDVVQMNSVMADSRPKCLVIDEIDG--ALGDGKGAVEVILKMVSAERKSNTAKENVAKE 414
+ + + + + K +++DE+DG A D GA++ IL++++ +
Sbjct: 59 MAERASITGTIFGIKGKLILLDEVDGLNARADA-GAIDAILELINKTK------------ 105
Query: 415 DQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHI 474
P+I ND + P+LR LR K+ + + + LK I
Sbjct: 106 ------------------YPIILTANDPWDPSLRPLRNAVKMIELKRLTKYPLKRILKKI 147
Query: 475 CNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSA 534
C E + AL + E +E D R +N LQ + + + +D+ +V RKD
Sbjct: 148 CEAEKITCEDEALDFIIEQSEGDARYAINMLQGVAEGYGRVT-LDMAKNLVRRKDRELDP 206
Query: 535 FDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQY 593
F+ + +F + + +++V+ + + DY+++ + ENI LQY
Sbjct: 207 FEALRGVFWAKYYWQAKSAVTDT----------------QIDYELLMRWLDENI-PLQY 248
>gi|11498795|ref|NP_070024.1| replication factor C large subunit [Archaeoglobus fulgidus DSM
4304]
gi|42559326|sp|O29072.1|RFCL_ARCFU RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit;
AltName: Full=afRFC large subunit; Short=afRFCla
gi|2649392|gb|AAB90051.1| activator 1, replication factor C, 53 KD subunit [Archaeoglobus
fulgidus DSM 4304]
Length = 479
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 158/372 (42%), Gaps = 77/372 (20%)
Query: 299 WHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKIL 358
W K + P LLL GPPG+GKT+LA A G+ VE+NASD RS IE +I+
Sbjct: 28 WAKSWKRGSKP----LLLAGPPGVGKTSLALALANTMGWEAVELNASDQRSWRVIE-RIV 82
Query: 359 DVVQMNSVMAD---------SRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKE 409
N ++D + K +++DE+D KE
Sbjct: 83 GEGAFNETISDEGEFLSSRIGKLKLIILDEVDNI----------------------HKKE 120
Query: 410 NVAKEDQPEKISKKKGCKKASLLRPVICICNDLY--APALRSLRQIAKVHVFIQPSVSRV 467
+V E ++ K+K + P+I I ND Y +P LR+L ++ + V+RV
Sbjct: 121 DVGGEAALIRLIKRKPAQ------PLILIANDPYKLSPELRNLCEMINFKRLTKQQVARV 174
Query: 468 VSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGR 527
+ R I E +K L +AE D+R+ +N Q L + KE L D+ + +
Sbjct: 175 LER---IALKEGIKVDKSVLLKIAENAGGDLRAAINDFQALAEGKEELKPEDV---FLTK 228
Query: 528 KDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHEN 587
+ + F + + IF KTK + V NE +++ + DVI + EN
Sbjct: 229 RTQEKDIFRVMQMIF---KTK--------NPAVYNE-----AMLLDESPEDVI-HWVDEN 271
Query: 588 ILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKP 647
L L+Y ++ V + L +D+ + R Q L+ Y L + +Q+
Sbjct: 272 -LPLEYSG---VELVNAYEALSRADIFLGRVRRRQFYRLWKYASYL------MTVGVQQM 321
Query: 648 NLEWPKSYQRYR 659
E K + RYR
Sbjct: 322 KEEPKKGFTRYR 333
>gi|68486652|ref|XP_712820.1| hypothetical protein CaO19.6891 [Candida albicans SC5314]
gi|46434235|gb|EAK93651.1| hypothetical protein CaO19.6891 [Candida albicans SC5314]
Length = 688
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 125/280 (44%), Gaps = 46/280 (16%)
Query: 302 KTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVV 361
K ++ P + +L+ GPPG+GKT+ AH+ AK G+ ++E NASD RS S + + ++
Sbjct: 175 KGNASDPDSFRAVLISGPPGIGKTSAAHLVAKSLGFDIIERNASDVRSKSLLNANVKSIL 234
Query: 362 QMNSVMA------------DSRPKCLVIDEIDG-ALGDGKGAVEVILKMVSAERKSNTAK 408
SV+ +++ C+++DE+DG + GD GA +
Sbjct: 235 NNTSVVGYFKHRGDTEKNSNNKRFCIIMDEVDGMSSGDHGGAGAL--------------- 279
Query: 409 ENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVV 468
+ CK S+ P+I ICND P +R+ + F +PS + V
Sbjct: 280 --------------SQFCKITSM--PMILICNDKSLPKMRTFDRTTYDLPFRRPSENEVK 323
Query: 469 SRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGS-QVVGR 527
SRL I E +K + L + T DIR +N L + K ++ + + + +
Sbjct: 324 SRLMTIAFREKVKLDPSVIGQLVQATSNDIRQMINLLSTVSKTQKQIGANSMKEVKESWQ 383
Query: 528 KDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVS-NEFDF 566
K + FDI + R+S++ N+ N+FDF
Sbjct: 384 KQVVLKPFDIAGRLLNSGIWSDPRSSLNDKLNLYFNDFDF 423
>gi|299472502|emb|CBN77287.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 978
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 100/240 (41%), Gaps = 46/240 (19%)
Query: 297 DSWHKKTRS--TGP--PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRS--- 349
+ WH K TG P + LL G PG+GK++ A + A+ GYHV+E+NASD RS
Sbjct: 476 EGWHLKGAKAPTGKDNPGARAALLSGVPGVGKSSTATLVAREMGYHVMELNASDTRSKRS 535
Query: 350 -----SSTIENKILDVVQMNSVMADS----RPKCLVIDEIDGALGDGKGAVEVILKMVSA 400
+S I NK+L + R + +V+DE+DG G +G ++ ++ ++
Sbjct: 536 LSEELASVIGNKVLSFTANGGGGGTTTGGFRKQLVVMDEVDGMGGSDRGGIQELILLIKK 595
Query: 401 ERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFI 460
R P+I ICND +RSL F
Sbjct: 596 SRV------------------------------PIIAICNDRQHQKIRSLVNHCYDLRFA 625
Query: 461 QPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDI 520
+P + R+K + E M A L E DIR L+ LQ +K + M++
Sbjct: 626 RPQKVTIAKRVKAVAKMEGMDVDDNAAEMLVEANGNDIRQVLHALQMWSRKSSKMTYMNL 685
>gi|68486597|ref|XP_712849.1| hypothetical protein CaO19.14180 [Candida albicans SC5314]
gi|46434265|gb|EAK93680.1| hypothetical protein CaO19.14180 [Candida albicans SC5314]
Length = 688
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 125/280 (44%), Gaps = 46/280 (16%)
Query: 302 KTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVV 361
K ++ P + +L+ GPPG+GKT+ AH+ AK G+ ++E NASD RS S + + ++
Sbjct: 175 KGNASDPDSFRAVLISGPPGIGKTSAAHLVAKSLGFDIIERNASDVRSKSLLNANVKSIL 234
Query: 362 QMNSVMA------------DSRPKCLVIDEIDG-ALGDGKGAVEVILKMVSAERKSNTAK 408
SV+ +++ C+++DE+DG + GD GA +
Sbjct: 235 NNTSVVGYFKHRGDTEKNSNNKRFCIIMDEVDGMSSGDHGGAGAL--------------- 279
Query: 409 ENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVV 468
+ CK S+ P+I ICND P +R+ + F +PS + V
Sbjct: 280 --------------SQFCKITSM--PMILICNDKSLPKMRTFDRTTYDLPFRRPSENEVK 323
Query: 469 SRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGS-QVVGR 527
SRL I E +K + L + T DIR +N L + K ++ + + + +
Sbjct: 324 SRLMTIAFREKVKLDPSVIGQLVQATSNDIRQMINLLSTVSKTQKQIGANSMKEVKESWQ 383
Query: 528 KDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVS-NEFDF 566
K + FDI + R+S++ N+ N+FDF
Sbjct: 384 KQVVLKPFDIAGRLLNSGIWSDPRSSLNDKLNLYFNDFDF 423
>gi|344303101|gb|EGW33375.1| hypothetical protein SPAPADRAFT_71228 [Spathaspora passalidarum
NRRL Y-27907]
Length = 878
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 149/374 (39%), Gaps = 75/374 (20%)
Query: 271 GNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHV 330
GN+ RN + +EN Q K G + +L+ GPPG+GKTT AH+
Sbjct: 343 GNKGQIAKLRNWLDNWFEN------QKHGFTKAGKDGSGVYRAVLISGPPGIGKTTAAHL 396
Query: 331 AAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA------------DSRPKCLVID 378
A GY V+E NASD RS S + + ++ SV+ +S+ CL++D
Sbjct: 397 VANELGYDVLEKNASDVRSKSLLNATVKSILDNTSVVGFFKQREDKQLGDNSKKICLIMD 456
Query: 379 EIDG-ALGD--GKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPV 435
E+DG + GD G GA+ ++ P+
Sbjct: 457 EVDGMSSGDHGGAGALSQFCRITHM---------------------------------PM 483
Query: 436 ICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTE 495
I ICND P +R+ ++ F +PS V SRL I E +K + L + T
Sbjct: 484 ILICNDKSLPKMRTFDRVCFDLPFRRPSEQEVKSRLMTIALREGVKLDPNIIGQLVQATS 543
Query: 496 CDIRSCLNTLQFLDKKKEILNVMDIGSQVVG-RKDMSRSAFDIWKEIFQKRKTKRLRNS- 553
DIR +N + + K ++ + + G +K + FDI RL +S
Sbjct: 544 NDIRQMINLMSQVSKTQKAIGNATLEEINQGWKKQVILKPFDI---------AGRLLSSG 594
Query: 554 --VSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPV--MLKTVKCLDCLG 609
S N++ + D + D D I EN L + P + + D +
Sbjct: 595 IWTSPRQNLNEKLDLYFN------DIDFAPLMIQENYLLTRPRLPGKHLDHIARAADDIS 648
Query: 610 NSDLMHQYIMRTQQ 623
SDL++ I ++Q
Sbjct: 649 QSDLINSLIRSSEQ 662
>gi|452988005|gb|EME87760.1| hypothetical protein MYCFIDRAFT_114532, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 1082
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 89/205 (43%), Gaps = 41/205 (20%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM---- 367
+ +++ GPPG+GKTT AH+ AK GY +VE NASD RS +E + V+ S+M
Sbjct: 548 RAVMIHGPPGIGKTTAAHLVAKLEGYDIVESNASDTRSKKLVEQGLKGVLSTTSLMGYFG 607
Query: 368 -------ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
A + L++DE+DG +G V + +
Sbjct: 608 RGADDVDASKKKLVLIMDEVDGMSAGDRGGVGALAAV----------------------- 644
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
CKK + P+I ICND P ++ + F +P+ + SR+ I E +
Sbjct: 645 -----CKKTMI--PMILICNDRKLPKMKPFDFVTYDLPFRRPTTDMIRSRIMTIAYREGL 697
Query: 481 KTSSIALTTLAEYTECDIRSCLNTL 505
K + L E + DIR +N +
Sbjct: 698 KMPPPVINALIEGSGADIRQVVNMI 722
>gi|326469755|gb|EGD93764.1| replication factor C protein [Trichophyton tonsurans CBS 112818]
gi|326485097|gb|EGE09107.1| replication factor C subunit 1 [Trichophyton equinum CBS 127.97]
Length = 1060
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 91/226 (40%), Gaps = 48/226 (21%)
Query: 298 SWHKKTRST-------GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSS 350
+WH R+ G + +++ GPPG+GKTT AH+ AK + +VE NASD RS
Sbjct: 492 NWHANARANFKKPGKDGSGTYRTVMIHGPPGIGKTTAAHLVAKLENFDIVETNASDTRSK 551
Query: 351 STIEN---KILDVVQMNSVMADSRPKC--------LVIDEIDGALGDGKGAVEVILKMVS 399
+E +LD + + K L++DE+DG +G V + +
Sbjct: 552 KLLETTLRGVLDTTSLQGYFSGEGKKVEPGKKNLVLIMDEVDGMSAGDRGGVGAVAAIAK 611
Query: 400 AERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVF 459
R P+I ICN+ P ++ + F
Sbjct: 612 KTR------------------------------IPIILICNERRLPKMKPFDHVTFELPF 641
Query: 460 IQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
+P+ ++ +RL IC E +K L L E T DIR +N L
Sbjct: 642 RRPTAEQIRARLFTICYREGIKIPPQVLDGLIEGTHADIRQVINML 687
Score = 40.4 bits (93), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 160 IDVLLQKVEQEAFNKALNSSSEGQSDRSLPEK-PVVHEQLWVDKYAPNSFTELLSDEQTN 218
ID +K E+ A SS G D+S +K V ++LW KYAP S + + ++ T
Sbjct: 424 IDREEKKRAAESKTSAPPSSGTGTKDKSASDKREPVDDRLWTTKYAPTSLSMICGNKGTV 483
Query: 219 REVLLWLKQW 228
++ WL+ W
Sbjct: 484 EKLQTWLRNW 493
>gi|327303742|ref|XP_003236563.1| chromosome transmission fidelity factor [Trichophyton rubrum CBS
118892]
gi|326461905|gb|EGD87358.1| chromosome transmission fidelity factor [Trichophyton rubrum CBS
118892]
Length = 1058
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 91/226 (40%), Gaps = 48/226 (21%)
Query: 298 SWHKKTRST-------GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSS 350
+WH R+ G + +++ GPPG+GKTT AH+ AK + +VE NASD RS
Sbjct: 490 NWHANARANFKKPGKDGSGTYRTVMIHGPPGIGKTTAAHLVAKLENFDIVETNASDTRSK 549
Query: 351 STIEN---KILDVVQMNSVMADSRPKC--------LVIDEIDGALGDGKGAVEVILKMVS 399
+E +LD + + K L++DE+DG +G V + +
Sbjct: 550 KLLETTLRGVLDTTSLQGYFSGEGKKVEPGKKNLVLIMDEVDGMSAGDRGGVGAVAAIAK 609
Query: 400 AERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVF 459
R P+I ICN+ P ++ + F
Sbjct: 610 KTR------------------------------IPIILICNERRLPKMKPFDHVTFELPF 639
Query: 460 IQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
+P+ ++ +RL IC E +K L L E T DIR +N L
Sbjct: 640 RRPTAEQIRARLFTICYREGIKIPPQVLDGLIEGTHADIRQVINML 685
>gi|367003008|ref|XP_003686238.1| hypothetical protein TPHA_0F03230 [Tetrapisispora phaffii CBS 4417]
gi|357524538|emb|CCE63804.1| hypothetical protein TPHA_0F03230 [Tetrapisispora phaffii CBS 4417]
Length = 845
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 143/335 (42%), Gaps = 66/335 (19%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA--- 368
+ +L GPPG+GKTT AH+ AK GY ++E NASD RS S + + + + SV+
Sbjct: 335 RAAMLYGPPGIGKTTAAHLIAKDLGYDILEQNASDVRSKSLLNAGVKNALDNMSVVGYFK 394
Query: 369 --------DSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
+ + +V+DE+DG G +G V ++ +
Sbjct: 395 NKDDVNDVNGKKFVIVMDEVDGMSGGDRGGVGILAQF----------------------- 431
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
C+K S P+I ICN+ P +R ++ F +P + + +RL I E
Sbjct: 432 -----CRKTST--PLILICNERNQPKMRPFDRVCLDVQFRRPDANSLKARLMTIAVREKF 484
Query: 481 KTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVG--RKDMSRSAFDIW 538
K + L + T DIR +N L + K + ++ +I S++ K+++ FDI
Sbjct: 485 KLDPNVIDKLVQATRGDIRQIINLLSTISKTSKNIDHTNI-SEISKSWEKNIALKPFDIV 543
Query: 539 KEIFQKRKTKRL-RNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPV 597
++ R L N+ + + ++ FD D+D + EN L + P
Sbjct: 544 HQMLSGRIYSDLGANTFTLNDKIALYFD----------DFDFTPLMVQENYLSTR---PS 590
Query: 598 MLK--------TVKCLDCLGNSDLMHQYIMRTQQM 624
+LK + D + DL+ + I ++Q+
Sbjct: 591 VLKPNESHLEAVAQAADAISLGDLVERNIRSSEQL 625
>gi|302509032|ref|XP_003016476.1| hypothetical protein ARB_04765 [Arthroderma benhamiae CBS 112371]
gi|291180046|gb|EFE35831.1| hypothetical protein ARB_04765 [Arthroderma benhamiae CBS 112371]
Length = 1073
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 91/226 (40%), Gaps = 48/226 (21%)
Query: 298 SWHKKTRST-------GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSS 350
+WH R+ G + +++ GPPG+GKTT AH+ AK + +VE NASD RS
Sbjct: 501 NWHANARANFKKPGKDGSGTYRTVMIHGPPGIGKTTAAHLVAKLENFDIVETNASDTRSK 560
Query: 351 STIEN---KILDVVQMNSVMADSRPKC--------LVIDEIDGALGDGKGAVEVILKMVS 399
+E +LD + + K L++DE+DG +G V + +
Sbjct: 561 KLLETTLRGVLDTTSLQGYFSGEGKKVEPGKKNLVLIMDEVDGMSAGDRGGVGAVAAIAK 620
Query: 400 AERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVF 459
R P+I ICN+ P ++ + F
Sbjct: 621 KTR------------------------------IPIILICNERRLPKMKPFDHVTFELPF 650
Query: 460 IQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
+P+ ++ +RL IC E +K L L E T DIR +N L
Sbjct: 651 RRPTAEQIRARLFTICYREGIKIPPQVLDGLIEGTHADIRQVINML 696
>gi|440302268|gb|ELP94590.1| replication factor C large subunit, putative [Entamoeba invadens
IP1]
Length = 762
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 104/201 (51%), Gaps = 34/201 (16%)
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA 368
P+++ +LL G PG+GKTT A + A+ GY+ VE NASD R+ ++ ++ V+ +N ++
Sbjct: 319 PDRQAVLLAGSPGVGKTTTAKILARVMGYNAVEFNASDVRNKKSVSAELKKVL-LNGQIS 377
Query: 369 DS---RPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKG 425
+P +++DE+DG +G + +++ +
Sbjct: 378 RGETYKPALVIMDEVDGMSSGDRGGIAELVQFI--------------------------- 410
Query: 426 CKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSI 485
KK + P++CICND+ ++SL + + F++ + + + +RL I NE+++ +S
Sbjct: 411 -KKTT--SPIVCICNDVMDKKMQSLVNVCETINFVKITPNDLETRLSVILKNENIEVASE 467
Query: 486 ALTTLAEYTECDIRSCLNTLQ 506
+ +A+ + D+R +N LQ
Sbjct: 468 KIEEIAKKSHGDVRYAINVLQ 488
>gi|403271300|ref|XP_003927570.1| PREDICTED: replication factor C subunit 1 [Saimiri boliviensis
boliviensis]
Length = 1148
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 138/361 (38%), Gaps = 105/361 (29%)
Query: 198 LWVDKYAPNSFTELLS---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTI 254
LWVDKY P S ++ D+ ++L WL+ W H +
Sbjct: 585 LWVDKYKPTSLKTIIGQQGDQSCANKLLRWLRNW----------------------HKSS 622
Query: 255 SQNKKQND--SSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQK 312
S++KK F K+ G+ + K
Sbjct: 623 SEDKKHAPKFGKFAGKDDGSSF-------------------------------------K 645
Query: 313 VLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA---- 368
+LL GPPG+GKTT A + + GY VE+NASD RS ++++ + + + S+
Sbjct: 646 AVLLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKNSLKAIVAESLNNTSIKGFYSN 705
Query: 369 -----DSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISK 422
S L++DE+DG G + +G ++ ++ ++ + KI
Sbjct: 706 GVASSVSTKHALIMDEVDGMAGNEDRGGIQELIGLI-----------------KHTKI-- 746
Query: 423 KKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKT 482
P+IC+CND P +RSL F +P V ++ + I E +K
Sbjct: 747 -----------PIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAMMSIAFKEGLKI 795
Query: 483 SSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV-VGRKDMSRSAFDIWKEI 541
A+ + DIR L+ L + + L + +KD+ FD+ +++
Sbjct: 796 PPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRAKKDIKMGPFDVARKV 855
Query: 542 F 542
F
Sbjct: 856 F 856
>gi|189339249|ref|NP_445999.1| replication factor C (activator 1) 1 [Rattus norvegicus]
Length = 1131
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 142/360 (39%), Gaps = 103/360 (28%)
Query: 198 LWVDKYAPNSFTELLS---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTI 254
LWVDKY P S ++ D+ ++L WL+ W +S+ EE A +
Sbjct: 567 LWVDKYKPTSLKNIIGQQGDQSCANKLLRWLRNWH--------KSSPEEKKHAAKFGKVA 618
Query: 255 SQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVL 314
S K + SSF K
Sbjct: 619 S---KDDGSSF----------------------------------------------KAA 629
Query: 315 LLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV----MADS 370
LL GPPG+GKTT A + + GY VE+NASD RS ++++ + + + S+ + +
Sbjct: 630 LLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKNSLKAIVAESLNNTSIKGFYTSGA 689
Query: 371 RPK-----CLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKK 424
P L++DE+DG G + +G ++ ++ ++ + KI
Sbjct: 690 SPSVSARHALIMDEVDGMAGNEDRGGIQELIGLI-----------------KHTKI---- 728
Query: 425 GCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSS 484
P+IC+CND P +RSL F +P V ++ S + I E +K
Sbjct: 729 ---------PIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKSAMLSIAFKEGLKIPP 779
Query: 485 IALTTLAEYTECDIRSCLNTLQFLDKKKEILNV--MDIGSQVVGRKDMSRSAFDIWKEIF 542
A+ + D+R L+ L + ++L SQ +KD+ FD+ +++F
Sbjct: 780 PAMNEIILGANQDVRQVLHNLSMWCAQSKVLTYDQAKADSQRA-KKDIRLGPFDVTRKVF 838
>gi|242809846|ref|XP_002485458.1| DNA replication factor C subunit Rfc1, putative [Talaromyces
stipitatus ATCC 10500]
gi|218716083|gb|EED15505.1| DNA replication factor C subunit Rfc1, putative [Talaromyces
stipitatus ATCC 10500]
Length = 1028
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 129/294 (43%), Gaps = 55/294 (18%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA--- 368
+ +++ GPPG+GKTT AH+ AK GY VVE NASD RS +E +L V+ S+
Sbjct: 496 RAVMIYGPPGIGKTTAAHLVAKLEGYDVVETNASDTRSKKLVEGGLLGVLDTTSLQGYFS 555
Query: 369 ------DSRPK--CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
+S+ K L++DE+DG ++ D+
Sbjct: 556 GEGKKVESQKKNLVLIMDEVDG----------------------------MSAGDRGGVG 587
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
+ KK ++ P+I ICN+ P ++ + F +P+ + +RL IC E +
Sbjct: 588 ALAAAAKKTNI--PLILICNERSLPKMKPFDHVTYELQFRRPTADMIRARLMTICFREGL 645
Query: 481 KTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV--VGRKDMSRSAFDIW 538
K L +L T DIR +N L + ++ L+ D G Q+ K + +DI
Sbjct: 646 KIPPPVLDSLIAGTNADIRQLINMLSTVKLDQKTLD-YDQGQQLSKAWEKHIILKPWDIA 704
Query: 539 KEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQ 592
+I + S SS S ++++ + + D++ + + EN L+ Q
Sbjct: 705 SKILNAQTF-----SQSSKSTLNDKIELYFN------DHEFSYLMLQENYLKTQ 747
>gi|296812349|ref|XP_002846512.1| replication factor C subunit 1 [Arthroderma otae CBS 113480]
gi|238841768|gb|EEQ31430.1| replication factor C subunit 1 [Arthroderma otae CBS 113480]
Length = 1056
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 91/226 (40%), Gaps = 48/226 (21%)
Query: 298 SWHKKTRST-------GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSS 350
+WH R+ G + +++ GPPG+GKTT AH+ AK + +VE NASD RS
Sbjct: 489 NWHANARAGFKKPGKDGSGTYRTVMIHGPPGIGKTTAAHLVAKLENFDIVETNASDTRSK 548
Query: 351 STIEN---KILDVVQMNSVMADSRPKC--------LVIDEIDGALGDGKGAVEVILKMVS 399
+E +LD + + K L++DE+DG +G V + +
Sbjct: 549 KLLETTLRGVLDTTSLQGYFSGEGKKVEPGKKNLVLIMDEVDGMSAGDRGGVGAVAAIAK 608
Query: 400 AERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVF 459
R P+I ICN+ P ++ + F
Sbjct: 609 KTR------------------------------IPIILICNERRLPKMKPFDHVTFELPF 638
Query: 460 IQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
+P+ ++ +RL IC E +K L L E T DIR +N L
Sbjct: 639 RRPTAEQIRARLFTICYREGIKIPPQVLDGLIEGTHADIRQVINML 684
>gi|302657732|ref|XP_003020581.1| hypothetical protein TRV_05323 [Trichophyton verrucosum HKI 0517]
gi|291184429|gb|EFE39963.1| hypothetical protein TRV_05323 [Trichophyton verrucosum HKI 0517]
Length = 1069
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 91/226 (40%), Gaps = 48/226 (21%)
Query: 298 SWHKKTRST-------GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSS 350
+WH R+ G + +++ GPPG+GKTT AH+ AK + +VE NASD RS
Sbjct: 500 NWHANARANFKKPGKDGSGTYRTVMIHGPPGIGKTTAAHLVAKLENFDIVETNASDTRSK 559
Query: 351 STIEN---KILDVVQMNSVMADSRPKC--------LVIDEIDGALGDGKGAVEVILKMVS 399
+E +LD + + K L++DE+DG +G V + +
Sbjct: 560 KLLETTLRGVLDTTSLQGYFSGEGKKVEPGKKNLVLIVDEVDGMSAGDRGGVGAVAAIAK 619
Query: 400 AERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVF 459
R P+I ICN+ P ++ + F
Sbjct: 620 KTR------------------------------IPIILICNERRLPKMKPFDHVTFELPF 649
Query: 460 IQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
+P+ ++ +RL IC E +K L L E T DIR +N L
Sbjct: 650 RRPTAEQIRARLFTICYREGIKIPPQVLDGLIEGTHADIRQVINML 695
Score = 39.7 bits (91), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 160 IDVLLQKVEQEAFNKALNSSSEGQSDRSLPEK-PVVHEQLWVDKYAPNSFTELLSDEQTN 218
ID +K E+ A SS G D++ +K V ++LW KYAP S + + ++ T
Sbjct: 432 IDREEKKRAAESKASAPPSSGTGTKDKNASDKREAVDDRLWTTKYAPTSLSMICGNKGTV 491
Query: 219 REVLLWLKQW 228
++ WL+ W
Sbjct: 492 EKLQTWLRNW 501
>gi|332218978|ref|XP_003258636.1| PREDICTED: LOW QUALITY PROTEIN: replication factor C subunit 1
[Nomascus leucogenys]
Length = 1148
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 138/365 (37%), Gaps = 105/365 (28%)
Query: 194 VHEQLWVDKYAPNSFTELLS---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRR 250
V LWVDKY P S ++ D+ ++L WL+ W
Sbjct: 581 VENLLWVDKYKPTSLKTIIGQQGDQSCANKLLRWLRNW---------------------- 618
Query: 251 HSTISQNKKQND--SSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGP 308
H + S++KK F+ K+ G +
Sbjct: 619 HKSSSEDKKHAAKFGKFSGKDDGCSF---------------------------------- 644
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA 368
K LL GPPG+GKTT A + + GY VE+NASD RS S+++ + + + S+
Sbjct: 645 ---KAALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKSSLKAIVAESLNNTSIKG 701
Query: 369 ---------DSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPE 418
S L++DE+DG G + +G ++ ++ ++ +
Sbjct: 702 FYSNGAASSVSTKHALIMDEVDGMAGNEDRGGIQELIGLI-----------------KHT 744
Query: 419 KISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNE 478
KI P+IC+CND P +RSL F +P V ++ + I E
Sbjct: 745 KI-------------PIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAMMSIAFKE 791
Query: 479 SMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV-VGRKDMSRSAFDI 537
+K A+ + DIR L+ L + + L + +KD+ FD+
Sbjct: 792 GLKIPPPAMNEIILGANQDIRQVLHNLSMWCAQSKALTYDQAKADSHRAKKDIKMGPFDV 851
Query: 538 WKEIF 542
+++F
Sbjct: 852 ARKVF 856
>gi|149035369|gb|EDL90073.1| replication factor C 1 [Rattus norvegicus]
Length = 1131
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 142/360 (39%), Gaps = 103/360 (28%)
Query: 198 LWVDKYAPNSFTELLS---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTI 254
LWVDKY P S ++ D+ ++L WL+ W +S+ EE A +
Sbjct: 568 LWVDKYKPTSLKNIIGQQGDQSCANKLLRWLRNWH--------KSSPEEKKHAAKFGKVA 619
Query: 255 SQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVL 314
S K + SSF K
Sbjct: 620 S---KDDGSSF----------------------------------------------KAA 630
Query: 315 LLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV----MADS 370
LL GPPG+GKTT A + + GY VE+NASD RS ++++ + + + S+ + +
Sbjct: 631 LLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKNSLKAIVAESLNNTSIKGFYTSGA 690
Query: 371 RPK-----CLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKK 424
P L++DE+DG G + +G ++ ++ ++ + KI
Sbjct: 691 SPSVSARHALIMDEVDGMAGNEDRGGIQELIGLI-----------------KHTKI---- 729
Query: 425 GCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSS 484
P+IC+CND P +RSL F +P V ++ S + I E +K
Sbjct: 730 ---------PIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKSAMLSIAFKEGLKIPP 780
Query: 485 IALTTLAEYTECDIRSCLNTLQFLDKKKEILNV--MDIGSQVVGRKDMSRSAFDIWKEIF 542
A+ + D+R L+ L + ++L SQ +KD+ FD+ +++F
Sbjct: 781 PAMNEIILGANQDVRQVLHNLSMWCAQSKVLTYDQAKADSQRA-KKDIRLGPFDVTRKVF 839
>gi|91774163|ref|YP_566855.1| replication factor C large subunit [Methanococcoides burtonii DSM
6242]
gi|121686603|sp|Q12TX1.1|RFCL_METBU RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|91713178|gb|ABE53105.1| Replication factor C large subunit [Methanococcoides burtonii DSM
6242]
Length = 497
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 111/241 (46%), Gaps = 39/241 (16%)
Query: 306 TGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNS 365
+G PE++ ++L GP G+GKT+ AH A+ + +E+NASD R++ IE +M+S
Sbjct: 38 SGTPEKRAIILHGPAGVGKTSAAHALARDLDWETIELNASDQRTAGVIERVAGSASKMSS 97
Query: 366 VMADSRPKCLVIDEIDGALGDG-KGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKK 424
+ + + +++DE D G+ +G I ++ NT DQ
Sbjct: 98 LTGTTAKRLIILDEADNIHGNADRGGARAIGGII-----KNT--------DQ-------- 136
Query: 425 GCKKASLLRPVICICNDLYA--PALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKT 482
P++ I NDLY P++RSL K F ++ +K IC E +
Sbjct: 137 ---------PIVLIANDLYGLTPSVRSLCIELK---FNSVQGRSMIPAMKRICVEEKIMC 184
Query: 483 SSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIF 542
L LAE D+RS + LQ + ++ +++ DI + +D S F + +IF
Sbjct: 185 GVGVLEKLAESAGGDLRSAIKDLQAVATGRDEIHIEDIATS---ERDTKESIFKVLGKIF 241
Query: 543 Q 543
+
Sbjct: 242 K 242
>gi|430814061|emb|CCJ28654.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 390
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 156/365 (42%), Gaps = 64/365 (17%)
Query: 474 ICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRS 533
IC E + ++ LTTL E E D RSCLN LQF K EI D++ +
Sbjct: 4 ICKIEGLSINTQILTTLCEIFENDFRSCLNALQFY-KTNEI--------------DLTMN 48
Query: 534 AFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQY 593
+ DI KTK ++S + N+ E ++ I N GDY+ + + L Y
Sbjct: 49 SLDI-------VKTKLKKDSSKKNYNIFME---IYETIQNYGDYEKLINNCFMQYLFQDY 98
Query: 594 HDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQ-------- 645
D K + D L D+++ I Q + L Y + H L ++
Sbjct: 99 KDDRFSKPILIGDWLFFFDILNSSIYERQNIELLSYLAFPLLIFHMLFISVKYDYKHNYQ 158
Query: 646 ---KPNLEWP-KSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHIL 701
K N +W + QR N +I+ S + P + + +SL+ D + L++IL
Sbjct: 159 QNLKQNSDWELYNLQRINN------EIYASLYYGSVPCLQQIFCLKSLLIDVVPYLVYIL 212
Query: 702 SPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSF 761
P LRP+ L L+ EK L ++++ M+ +++ Y TK+D F
Sbjct: 213 LPK-LRPINLQLIKNTEKQALNRVINNMIYFNINYSQTKTD-----------DGTFIYKF 260
Query: 762 DPPINEFITFKGYRSNHYVL-ALAVKQVLVHEVE-------KQRIMQVTIGKSEHLADGY 813
+PPI ITF + + + ++ Q++ E+E KQR + + KS ++ GY
Sbjct: 261 EPPIETLITFAFLKKHEPIFPKYSICQIINMELENEKLRIQKQRYNKDS-NKSLNVTSGY 319
Query: 814 KENMD 818
K D
Sbjct: 320 KRKSD 324
>gi|169865629|ref|XP_001839413.1| purine nucleotide binding protein [Coprinopsis cinerea
okayama7#130]
gi|116499532|gb|EAU82427.1| purine nucleotide binding protein [Coprinopsis cinerea
okayama7#130]
Length = 920
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 106/244 (43%), Gaps = 59/244 (24%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKI----------LDVV 361
+ +L+ G PG+GKTT AH+ AK GY +E+NASD RS +EN + +
Sbjct: 404 RAVLITGSPGIGKTTSAHLCAKLAGYTPIELNASDARSKKLVENGMNINNTSLDGFIKGA 463
Query: 362 QMNSVMADSRPK-CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
NSV D + CL++DE+DG +G V + ++
Sbjct: 464 SKNSVGVDITDRTCLIMDEVDGMSAGDRGGVGALNALI---------------------- 501
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
KK + P+ICI ND A L+ L+ F +P V+ + SR+ I E +
Sbjct: 502 ------KKTKV--PIICIANDRNAQKLKPLQGTTFSLPFHKPQVNMIRSRILTIAFKEKL 553
Query: 481 KTSSIALTTLAEYTECDIRSCL----------NTLQF--------LDKKKEILNVMDIGS 522
K + L + DIR L NT+ F ++K +IL+ DI S
Sbjct: 554 KIPPNVIDQLIAGAQSDIRQVLNMLSTWKLSSNTMDFDEGKELVKQNEKYQILSPFDITS 613
Query: 523 QVVG 526
+V+G
Sbjct: 614 KVLG 617
>gi|340372603|ref|XP_003384833.1| PREDICTED: replication factor C subunit 1-like [Amphimedon
queenslandica]
Length = 994
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 135/326 (41%), Gaps = 62/326 (19%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV----- 366
K LL GPPG+GKTT A + K Y E+NAS RS +++ + D + +S+
Sbjct: 535 KAALLSGPPGIGKTTTAVLVCKELDYTFTELNASATRSRKSLQQFVTDSLSSHSMDSYIT 594
Query: 367 MADSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKG 425
R L++DE+DG G + +G V +++++ R
Sbjct: 595 GGSQRHHVLIMDEVDGMAGNEDRGGVMELIQLIKTSR----------------------- 631
Query: 426 CKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSI 485
P+ICICND +RSL F +P + ++ + + E +K
Sbjct: 632 -------VPIICICNDRSQAKMRSLANYCFDLRFYKPKLEQIKGPMMSVAFKEGIKIKPE 684
Query: 486 ALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKR 545
AL + DIR L++L L + +G G+ + +S FD+ +++FQ
Sbjct: 685 ALNEIIISCNYDIRQVLHSLSMLAAGTTSITKESLGGG-EGKTSIRKSPFDVVRKVFQPF 743
Query: 546 KTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPV-------- 597
+R ++ + D + DY ++ + EN LQ++ PV
Sbjct: 744 DGQR-------ELSLREKSDLFFT------DYSLMPLFVQENYLQVK---PVNNTGTIQL 787
Query: 598 MLKTVKCLDCLGNSDLMHQYIMRTQQ 623
+ K D + DL+ + I+R+ Q
Sbjct: 788 LEKVSSAADSIAQGDLVSR-IVRSDQ 812
>gi|321264327|ref|XP_003196881.1| DNA replication activator 1 subunit1 (Replication factor C subunit
1) [Cryptococcus gattii WM276]
gi|317463358|gb|ADV25094.1| DNA replication activator 1 subunit1 (Replication factor C subunit
1), putative [Cryptococcus gattii WM276]
Length = 991
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 144/348 (41%), Gaps = 74/348 (21%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIEN------KILDV----- 360
+ +L+ GPPG+GKTT AH+ AK GY +E+NASD RS IEN K LD
Sbjct: 461 RAVLISGPPGIGKTTSAHLMAKEAGYTPLELNASDTRSKKLIENETNVDNKSLDGFFKGQ 520
Query: 361 ---VQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
+ SR CL++DE+DG +G V + ++ RK+
Sbjct: 521 GIGTNAAGLKIGSR-TCLIMDEVDGMSAGDRGGVGALNTLI---RKTKI----------- 565
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
P+I ICND ++ L+ F +P + + SR+ I +
Sbjct: 566 ----------------PMILICNDRTLQKMKPLQSTTFNMTFRRPQPNEIRSRIMSILHK 609
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV--VGRKDMSRSAF 535
E +K + L + DIR LN L K +N D G Q+ V K+ + F
Sbjct: 610 EKLKIPPNVVDELIKGVNSDIRQVLNMLSTFKLGKSEMN-FDEGKQLVKVNEKNTIMTPF 668
Query: 536 DIWKEI-----FQKRKTKRLRNSVSSSSNVSNEFDFL------HSLISNRGDYDVIFDGI 584
I ++ F K + L + + ++F F+ H L +N + + DG
Sbjct: 669 TIIDKLTGPYAFSKNSKETLNDRIEL---YFHDFSFVPLFMQEHYLKTNPTALNNL-DGP 724
Query: 585 HENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQ----MPLYV 628
+N+ L+ K D + + DL+ + I ++Q +PL+
Sbjct: 725 EKNLKHLEL-------VSKAADSISDGDLIDRMIHGSEQHWSLLPLHA 765
>gi|350587456|ref|XP_003128976.3| PREDICTED: replication factor C subunit 1 [Sus scrofa]
Length = 1207
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 139/365 (38%), Gaps = 105/365 (28%)
Query: 194 VHEQLWVDKYAPNSFTELLS---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRR 250
V LWVDKY P S ++ D+ ++L WL+ W
Sbjct: 643 VENLLWVDKYKPASLKTIIGQQGDQSCANKLLRWLQNW---------------------- 680
Query: 251 HSTISQNKKQND--SSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGP 308
H + S++KK+ F K+ G+ +
Sbjct: 681 HKSPSEDKKRAAKFGKFAGKDDGSSF---------------------------------- 706
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA 368
K LL GPPG+GKTT A + + GY VE+NASD RS ++++ I + + S+
Sbjct: 707 ---KAALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKNSLKEIIAESLNNTSIKG 763
Query: 369 ---------DSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPE 418
S L++DE+DG G + +G ++ ++ ++ +
Sbjct: 764 FYSSGAAHSVSTKHALIMDEVDGMAGNEDRGGIQELIGLI-----------------KHT 806
Query: 419 KISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNE 478
KI P+IC+CND P +RSL F +P V ++ + I E
Sbjct: 807 KI-------------PIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAMMSIAFKE 853
Query: 479 SMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV-VGRKDMSRSAFDI 537
+K A+ + DIR L+ L + + L + +KD+ FD+
Sbjct: 854 GLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRAKKDIKLGPFDV 913
Query: 538 WKEIF 542
+++F
Sbjct: 914 ARKVF 918
>gi|443730009|gb|ELU15704.1| hypothetical protein CAPTEDRAFT_175237 [Capitella teleta]
Length = 730
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 144/359 (40%), Gaps = 105/359 (29%)
Query: 198 LWVDKYAPNSFTELLS---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTI 254
+WVDKY P + +++ D+ R+++ WL+ W H I
Sbjct: 172 MWVDKYKPQTLKQIIGQTGDKSNARKLMNWLQNW----------------------HRNI 209
Query: 255 SQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVL 314
S KK +F NR+S+ + G K
Sbjct: 210 SSGKK---PAF------NRFSD--------------DGSGF----------------KAA 230
Query: 315 LLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM------- 367
LL GPPG+GKTT A + K G+ VE+NASD RS +++++ + + ++++
Sbjct: 231 LLSGPPGVGKTTTATLVCKEAGFSFVELNASDTRSKRKLKDEVSESLNNHTLVDFFGGQV 290
Query: 368 --ADSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKK 424
++ + CLV+DE+DG G + +G V +++++ + KI
Sbjct: 291 TPSEGQRHCLVMDEVDGMAGNEDRGGVAELIQLI-----------------KNSKI---- 329
Query: 425 GCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSS 484
PVIC+CND +RSL F +P V ++ + + + E +K S
Sbjct: 330 ---------PVICMCNDRNHQKIRSLANHCFDLRFQRPRVEQIKAAMMSVAFKEGLKISP 380
Query: 485 IALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV-VGRKDMSRSAFDIWKEIF 542
AL + D+R ++ L L+ S +KD FD+ +++F
Sbjct: 381 PALQEVIVAANQDVRQIMHNLSMWTSTDRNLSYDQAKSDANKAKKDAHLGPFDVCRQVF 439
>gi|443895827|dbj|GAC73172.1| vacuolar H+-ATPase V1 sector, subunit F [Pseudozyma antarctica
T-34]
Length = 953
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 90/212 (42%), Gaps = 48/212 (22%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV----- 366
+ +L+ GPPG+GKTT AH+ AK GY +E NASD RS IE+ + D + S+
Sbjct: 442 RAVLISGPPGIGKTTSAHLVAKMEGYSPLEFNASDARSKKLIESMLQDTINNKSLDSWYS 501
Query: 367 --------MADSRPK-----CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAK 413
+ P+ L++DE+DG G +G V I ++
Sbjct: 502 GGSGGAKASSSDVPRIHERTVLIMDEVDGMSGGDRGGVGAINALI--------------- 546
Query: 414 EDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKH 473
KK + P+ICICND +R F +P + V SR+
Sbjct: 547 -------------KKTKV--PIICICNDRRNQKMRPFEHTTYNLGFRKPDAAAVKSRMLS 591
Query: 474 ICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
I E +K + L E + DIRS +N L
Sbjct: 592 IAFKEKLKIPGEVMAQLIEAAQSDIRSVINML 623
>gi|336476698|ref|YP_004615839.1| AAA ATPase [Methanosalsum zhilinae DSM 4017]
gi|335930079|gb|AEH60620.1| AAA ATPase [Methanosalsum zhilinae DSM 4017]
Length = 507
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 119/257 (46%), Gaps = 38/257 (14%)
Query: 290 SNSKGIQD--SWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDD 347
N K +++ W +K T PE++ ++L G G+GKT+ AH A G+ ++E+NASD
Sbjct: 21 GNKKAVENLQEWAQKWTYT-IPEKRAVILAGRAGIGKTSAAHALANDFGWEIIELNASDK 79
Query: 348 RSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTA 407
R++ +E +M+S+ + + +++DE D G S++R A
Sbjct: 80 RTADAVERVAGSASKMHSLDGSTSRRLIILDEADNLHG-------------SSDRGGTRA 126
Query: 408 KENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSR- 466
N+ K + +P++ I NDLY + S + + + SR
Sbjct: 127 IGNIIKRTK----------------QPIVLIANDLY--GISSTVRSNSLEIKFNSIQSRS 168
Query: 467 VVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVG 526
+V LK IC E + L +AE + D+RS +N LQ + ++ + + DI +
Sbjct: 169 MVPALKKICREEGIMCGVGVLEKIAENADGDLRSAVNDLQAVSMGRDEIYIEDIATS--- 225
Query: 527 RKDMSRSAFDIWKEIFQ 543
++D S F + +IF+
Sbjct: 226 QRDTQGSIFKVLPKIFK 242
>gi|374106711|gb|AEY95620.1| FACR102Wp [Ashbya gossypii FDAG1]
Length = 840
Score = 90.1 bits (222), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 104/244 (42%), Gaps = 41/244 (16%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA--- 368
+ +L GPPG+GKTT AH+ A GY V+E NASD RS + I + + SV+
Sbjct: 331 RAAMLYGPPGIGKTTAAHLVANELGYDVLEQNASDVRSKKLLNEGIKNALDNTSVIGYFN 390
Query: 369 -----DSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKK 423
+SR +++DE+DG G +G V + +
Sbjct: 391 KKEHRNSRKFVIIMDEVDGMSGGDRGGVGQMAQF-------------------------- 424
Query: 424 KGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTS 483
C+K S P+I ICN+ P +R ++ F +P + +RL I E K
Sbjct: 425 --CRKTS--SPLILICNERTLPKMRPFDRVVCDIQFRRPDAQSMKARLMTIAVREGFKLD 480
Query: 484 SIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVG--RKDMSRSAFDIWKEI 541
+ L T DIR +N L + + + D Q+ K+++ +DI ++
Sbjct: 481 PTVVDQLVAATRGDIRQIINLLSTISTTTKSIG-HDNARQISAAWEKNIALKPYDITHKL 539
Query: 542 FQKR 545
F+ R
Sbjct: 540 FEGR 543
>gi|302307023|ref|NP_983504.2| ACR102Wp [Ashbya gossypii ATCC 10895]
gi|299788800|gb|AAS51328.2| ACR102Wp [Ashbya gossypii ATCC 10895]
Length = 840
Score = 90.1 bits (222), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 104/244 (42%), Gaps = 41/244 (16%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA--- 368
+ +L GPPG+GKTT AH+ A GY V+E NASD RS + I + + SV+
Sbjct: 331 RAAMLYGPPGIGKTTAAHLVANELGYDVLEQNASDVRSKKLLNEGIKNALDNTSVIGYFN 390
Query: 369 -----DSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKK 423
+SR +++DE+DG G +G V + +
Sbjct: 391 KKEHRNSRKFVIIMDEVDGMSGGDRGGVGQMAQF-------------------------- 424
Query: 424 KGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTS 483
C+K S P+I ICN+ P +R ++ F +P + +RL I E K
Sbjct: 425 --CRKTS--SPLILICNERTLPKMRPFDRVVCDIQFRRPDAQSMKARLMTIAVREGFKLD 480
Query: 484 SIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVG--RKDMSRSAFDIWKEI 541
+ L T DIR +N L + + + D Q+ K+++ +DI ++
Sbjct: 481 PTVVDQLVAATRGDIRQIINLLSTISTTTKSIG-HDNARQISAAWEKNIALKPYDITHKL 539
Query: 542 FQKR 545
F+ R
Sbjct: 540 FEGR 543
>gi|212537239|ref|XP_002148775.1| DNA replication factor C subunit Rfc1, putative [Talaromyces
marneffei ATCC 18224]
gi|210068517|gb|EEA22608.1| DNA replication factor C subunit Rfc1, putative [Talaromyces
marneffei ATCC 18224]
Length = 1031
Score = 90.1 bits (222), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 100/222 (45%), Gaps = 42/222 (18%)
Query: 314 LLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA----- 368
+++ GPPG+GKTT AH+ AK GY VVE NASD RS +E +L V+ S+
Sbjct: 498 VMIHGPPGIGKTTAAHLVAKLEGYDVVETNASDTRSKKLVEGSLLGVLDTTSLQGYFSSE 557
Query: 369 ----DSRPK--CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISK 422
+S+ K L++DE+DG ++ D+ +
Sbjct: 558 GKNVESQKKNLVLIMDEVDG----------------------------MSAGDRGGVGAL 589
Query: 423 KKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKT 482
KK ++ P+I ICN+ P ++ + F +P+ + +RL IC E +K
Sbjct: 590 AAAAKKTNI--PLILICNERSLPKMKPFDHVTYELPFRRPTAEMIRARLMTICFREGLKI 647
Query: 483 SSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV 524
L +L T DIR +N L + ++ L+ D G Q+
Sbjct: 648 PPPVLDSLIAGTNADIRQLINMLSTVKLDQKTLD-FDQGKQL 688
>gi|159041491|ref|YP_001540743.1| replication factor C large subunit [Caldivirga maquilingensis
IC-167]
gi|157920326|gb|ABW01753.1| AAA ATPase central domain protein [Caldivirga maquilingensis
IC-167]
Length = 418
Score = 90.1 bits (222), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 95/200 (47%), Gaps = 36/200 (18%)
Query: 310 EQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMAD 369
E++ +LL GPPG GKTT+ H A G + E+NASD R++S I I + S+
Sbjct: 42 EKRAILLSGPPGTGKTTMVHALAYDYGLELYEMNASDVRTASRIRETIGKALTQGSLFG- 100
Query: 370 SRPKCLVIDEIDG--ALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCK 427
R K ++ DE+DG D G E++ ++ KE +
Sbjct: 101 FRGKLVLFDEVDGINVRADQGGIYEIV---------------DIVKEAKV---------- 135
Query: 428 KASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSR-VVSRLKHICNNESMKTSSIA 486
P+ ND + P LR LR I V V ++P +R ++ L+ ICN E +K A
Sbjct: 136 ------PIAMTANDPWDPKLRPLRDICVV-VQVKPLKNRDIIEMLRRICNAEKVKCEEDA 188
Query: 487 LTTLAEYTECDIRSCLNTLQ 506
L +AE + D+RS +N LQ
Sbjct: 189 LRLIAESSMGDMRSAINDLQ 208
>gi|410672033|ref|YP_006924404.1| replication factor C large subunit [Methanolobus psychrophilus R15]
gi|409171161|gb|AFV25036.1| replication factor C large subunit [Methanolobus psychrophilus R15]
Length = 497
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 112/253 (44%), Gaps = 40/253 (15%)
Query: 297 DSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENK 356
DSW + G P+ K ++L G G+GKT+ AH A + V+E+NASD R++S IE
Sbjct: 34 DSW-----AHGAPDVKAVILHGQAGIGKTSSAHAMAADYDWEVIELNASDQRTASVIEKV 88
Query: 357 ILDVVQMNSVMADSRPKCLVIDEIDGALGDG-KGAVEVILKMVSAERKSNTAKENVAKED 415
QM ++ S + +++DE D G +G I+ ++ NT++
Sbjct: 89 AGSASQMRTLTGMSGKRLIILDEADNLHGTSDRGGARAIIDVI-----KNTSQ------- 136
Query: 416 QPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHIC 475
P+I I ND+Y + S+R + F ++ LK I
Sbjct: 137 ------------------PIILIANDIYGIS-SSVRALCLEIKFPAIQARSMIPALKEIA 177
Query: 476 NNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAF 535
NE + AL +AE + D RS +N LQ + +++ DI + +D S F
Sbjct: 178 RNEGLMCGIGALEKIAENADGDFRSAVNDLQAAAIGRTEVHLEDIST---AERDNKESVF 234
Query: 536 DIWKEIFQKRKTK 548
+ +IF+ + K
Sbjct: 235 KVVGKIFKGKSVK 247
>gi|440904765|gb|ELR55230.1| Replication factor C subunit 1, partial [Bos grunniens mutus]
Length = 1152
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 106/508 (20%), Positives = 187/508 (36%), Gaps = 149/508 (29%)
Query: 194 VHEQLWVDKYAPNSFTELLS---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRR 250
V LWVDKY P S ++ D+ ++L WL+ W
Sbjct: 585 VESLLWVDKYKPTSLKTIIGQQGDQSCANKLLRWLQNW---------------------- 622
Query: 251 HSTISQNKKQND--SSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGP 308
H + S++KK F K+ G+ +
Sbjct: 623 HKSPSEDKKHAAKFGKFAGKDDGSSF---------------------------------- 648
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNS--- 365
K LL GPPG+GKTT A + + GY VE+NASD RS ++++ + + + S
Sbjct: 649 ---KAALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKNSLKEIVAESLNNTSIKG 705
Query: 366 ------VMADSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPE 418
V + L++DE+DG G + +G ++ ++ ++ +
Sbjct: 706 FYSSGTVHSVGTRHALIMDEVDGMAGNEDRGGIQELIGLI-----------------KHT 748
Query: 419 KISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNE 478
KI P+IC+CND P +RSL F +P V ++ + I E
Sbjct: 749 KI-------------PIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAMMSIAFKE 795
Query: 479 SMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV-VGRKDMSRSAFDI 537
+K A+ + DIR L+ L + + L + +KD+ FD+
Sbjct: 796 GLKIPPPAMNEIILGANQDIRQVLHNLNMWCARNKALTYDQAKADSHRAKKDIKLGPFDV 855
Query: 538 WKEIFQKRKTKRLRNSVSSSSNVSNEFD-FLHSLISNRGDYDVIFDGIHENILQLQYHDP 596
+++F + ++ ++ ++ D F H DY + + EN + ++ P
Sbjct: 856 ARKVF-------VSGEETAHMSLMDKSDLFFH-------DYSIAPLFVQENYIHVK---P 898
Query: 597 V---------MLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKP 647
V ++ + D + + DL+ ++I Q L P AI L ++ +
Sbjct: 899 VAAGGDMKKHLMLLSRAADSICDGDLVDRHIRNKQNWSLL---PTQAIYASVLPGELMR- 954
Query: 648 NLEWPKSYQRYRNAFMEKMDIFKSWHSK 675
+M + F SW K
Sbjct: 955 -------------GYMTQFPTFPSWLGK 969
>gi|448440147|ref|ZP_21588395.1| replication factor C large subunit [Halorubrum saccharovorum DSM
1137]
gi|445690664|gb|ELZ42874.1| replication factor C large subunit [Halorubrum saccharovorum DSM
1137]
Length = 503
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 140/332 (42%), Gaps = 68/332 (20%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-- 368
++ ++L G PG+GKT+ AH A G+ VE+NASD R++ IE + N+ +
Sbjct: 37 REAVVLHGSPGVGKTSAAHALANDMGWETVELNASDQRTADVIE-RFAGRAARNATLGGS 95
Query: 369 ---------DSRPKCLVI-DEIDGALGD-GKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
D+ + LVI DE D G+ +G I K+V
Sbjct: 96 AAGGGAAGGDTASRQLVILDEADNIHGNYDRGGASAITKLV------------------- 136
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
K+ G +P++ I ND Y A R LR + F S +V L+ +C
Sbjct: 137 ----KESG-------QPIVLIANDYYDMA-RGLRDATQEIEFRDVSARSIVPVLRDVCRK 184
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
ES++ S AL +AE D+R +N LQ + ++ + V D+ V G +D + F
Sbjct: 185 ESIEFESDALERIAERNRGDLRGAINDLQAATEGRDSIAVEDV---VTGDRDKALGLFPF 241
Query: 538 WKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPV 597
+ ++ + ++ S+ V D L I N N+L + ++P
Sbjct: 242 LDAVLKEESAE---EALQSAYAVDETPDDLTKWIEN-------------NVLDV--YEP- 282
Query: 598 MLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVY 629
++ V+ D L N+D+ + TQ + Y
Sbjct: 283 -MEAVRAYDFLANADVWLGRVRATQNYTYWRY 313
>gi|395327638|gb|EJF60036.1| DNA replication factor C, large subunit [Dichomitus squalens
LYAD-421 SS1]
Length = 718
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 94/207 (45%), Gaps = 44/207 (21%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIEN--KILDVVQMNSVMAD 369
+ +++ GPPG+GKTT AH+ AK G+ VE+NASD RS +EN I++ ++ M+
Sbjct: 197 RAVMITGPPGIGKTTSAHLCAKLAGFTPVELNASDARSKKLVENSTNIMN-TSLDGWMSG 255
Query: 370 SR-----------PKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPE 418
+ CL++DE+DG +G V ++ ++
Sbjct: 256 GQKTNAAGVTITDKSCLIMDEVDGMSAGDRGGVGALVALI-------------------- 295
Query: 419 KISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNE 478
K+ + P+ICI ND A L+ L F +P V+ V SR+ I E
Sbjct: 296 --------KRTKI--PIICIANDRGAQKLKPLVSATYNLTFRRPEVNMVRSRIMSILFKE 345
Query: 479 SMKTSSIALTTLAEYTECDIRSCLNTL 505
MK + + L + + DIR LN L
Sbjct: 346 GMKIPANVVDQLVQGAQADIRQVLNML 372
>gi|241951560|ref|XP_002418502.1| replication factor C subunit, putative [Candida dubliniensis CD36]
gi|223641841|emb|CAX43803.1| replication factor C subunit, putative [Candida dubliniensis CD36]
Length = 886
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 125/285 (43%), Gaps = 56/285 (19%)
Query: 302 KTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVV 361
K ++ P + +L+ GPPG+GKT+ AH+ AK G+ ++E NASD RS + + + ++
Sbjct: 373 KGNASDPGSFRAVLISGPPGIGKTSAAHLVAKSLGFDIIERNASDVRSKALLNANVKSIL 432
Query: 362 QMNSVMA------------DSRPKCLVIDEIDG-ALGDGKGAVEVILKMVSAERKSNTAK 408
SV+ +++ C+++DE+DG + GD GA +
Sbjct: 433 NNTSVVGYFKHRDDAEKSSNNKKFCIIMDEVDGMSSGDHGGAGAL--------------- 477
Query: 409 ENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVV 468
+ CK S+ P+I ICND P +R+ + F +PS V
Sbjct: 478 --------------SQFCKITSM--PMILICNDKSLPKMRTFDRTTYDLPFRRPSEIEVR 521
Query: 469 SRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVG-- 526
SRL I E +K + + + T DIR +N L + K ++ IG+ +
Sbjct: 522 SRLMTIAFREKVKLDPSVIGQMVQATSNDIRQMINLLSTVSKTQK-----QIGADTMKEV 576
Query: 527 ----RKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVS-NEFDF 566
+K + FDI + R+S++ N+ N+FDF
Sbjct: 577 KDSWQKQVVLKPFDIAARLLNSGIWSDPRSSLNDKLNLYFNDFDF 621
>gi|213402719|ref|XP_002172132.1| replication factor C subunit 1 [Schizosaccharomyces japonicus
yFS275]
gi|212000179|gb|EEB05839.1| replication factor C subunit 1 [Schizosaccharomyces japonicus
yFS275]
Length = 930
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 89/206 (43%), Gaps = 42/206 (20%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA--- 368
+ +L+ GPPG+GKTT AH+ A Y V+E NASD RS ++ +L V S+
Sbjct: 398 RAVLISGPPGIGKTTAAHLVAHLEDYDVLEFNASDTRSKRMLDEHLLGVTDSRSLAGYLQ 457
Query: 369 ---DSRPKC------LVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEK 419
RP L++DE+DG +G V + ++ R
Sbjct: 458 GPGGKRPDANKQRLVLIMDEVDGMSAGDRGGVGQLNTIIKKTRI---------------- 501
Query: 420 ISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNES 479
P+ICICND +P LR L + F +P + + SR+ I E
Sbjct: 502 --------------PIICICNDRASPKLRPLDRTTFDMRFRRPDANSLRSRIMSIAYREQ 547
Query: 480 MKTSSIALTTLAEYTECDIRSCLNTL 505
+K + A+ L + T DIR +N L
Sbjct: 548 LKLAPAAVDQLVQGTHSDIRQIINIL 573
>gi|348571613|ref|XP_003471590.1| PREDICTED: replication factor C subunit 1-like [Cavia porcellus]
Length = 1216
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 143/365 (39%), Gaps = 108/365 (29%)
Query: 198 LWVDKYAPNSFTELLS---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTI 254
LWVDKY P S ++ D+ ++L WL+ W +S+ +E ++H+
Sbjct: 588 LWVDKYKPTSLKTIIGQQGDQSCANKLLRWLRNWH--------KSSPDE-----KKHAKF 634
Query: 255 SQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVL 314
+ FT K+ G+ + K
Sbjct: 635 GK--------FTSKDDGSSY-------------------------------------KAA 649
Query: 315 LLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV-------- 366
LL GPPG+GKTT A + + GY VE+NASD RS ++++ + + + S+
Sbjct: 650 LLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKNSLKAVVAESLNNTSIKGFYSTSP 709
Query: 367 --MADSRPK-----CLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPE 418
+ + P L++DE+DG G + +G ++ ++ ++ +
Sbjct: 710 TELGGAVPSVSAKHALIMDEVDGMAGTEDRGGIQELIGLI-----------------KHT 752
Query: 419 KISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNE 478
KI P+IC+CND P +RSL F +P V ++ + I E
Sbjct: 753 KI-------------PIICMCNDRNHPKIRSLVHHCFDLRFQRPRVEQIKGAMMSIAFKE 799
Query: 479 SMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV-VGRKDMSRSAFDI 537
+K A+ + DIR L+ L + + L + +KD+ FD+
Sbjct: 800 GLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRAKKDIKLGPFDV 859
Query: 538 WKEIF 542
+++F
Sbjct: 860 ARKVF 864
>gi|374630528|ref|ZP_09702913.1| replication factor C large subunit [Methanoplanus limicola DSM
2279]
gi|373908641|gb|EHQ36745.1| replication factor C large subunit [Methanoplanus limicola DSM
2279]
Length = 497
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 120/280 (42%), Gaps = 43/280 (15%)
Query: 299 WHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKIL 358
W +K S P LLL G PG+GKT+ A+ A + ++E+NASD R+ S IE K+
Sbjct: 29 WARKWESGKEP----LLLYGKPGIGKTSAAYALANDMEWEMLELNASDQRTKSIIE-KVA 83
Query: 359 DVVQMNSVMADSRPKCLVIDEIDGALGDG-KGAVEVILKMVSAERKSNTAKENVAKEDQP 417
++ + K L+ DE D G KG IL ++
Sbjct: 84 GSCATTMSLSGAERKLLLFDEADNLHGSADKGGARAILDII------------------- 124
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
KISK+ P+I I ND Y A + L+ + + F + + L+ IC+
Sbjct: 125 -KISKQ----------PIILIANDSYGIA-KELKSVCEQVQFRALTAKTISDHLRDICSL 172
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
E +K S L +AE + D+RS LN L ++ L + + KD S FD+
Sbjct: 173 EDLKCSESTLAEIAEGSGGDMRSALNKLYAASLGEDTLREAAVST---ASKDERASIFDL 229
Query: 538 WKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDY 577
+ + R+ +RL + S+ +S D + I Y
Sbjct: 230 VGSVLKSREDQRL---MQLSAEISETPDVMSQWIEEGASY 266
>gi|333911577|ref|YP_004485310.1| replication factor C large subunit [Methanotorris igneus Kol 5]
gi|333752166|gb|AEF97245.1| Replication factor C large subunit [Methanotorris igneus Kol 5]
Length = 502
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 108/233 (46%), Gaps = 36/233 (15%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSR 371
K ++L G PG GKTTLAH A G+ V+E+NASD R+ + I + + S+ +
Sbjct: 40 KPIILVGNPGCGKTTLAHALANDYGFDVIELNASDKRNRAAIRHIVGTAASSKSLTG--K 97
Query: 372 PKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKAS 430
+++DE+DG G + G V ILK++ +
Sbjct: 98 NILIILDEVDGISGTEDSGGVSEILKVIKEAK---------------------------- 129
Query: 431 LLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTL 490
P+I ND+Y P L+ LR + +V + +++ LK I E + L +
Sbjct: 130 --NPIILTANDIYKPTLKPLRDVCEVINVPNVHTNTILAVLKRIAEKEGLDVDEKTLKII 187
Query: 491 AEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQ 543
A+++ D+R+ +N L+ L EI +I S++ R D R+ FD + IF+
Sbjct: 188 AKHSGGDLRAAINDLEALALGGEI--SPEIASKLPDR-DTERTIFDAMRIIFK 237
>gi|156841650|ref|XP_001644197.1| hypothetical protein Kpol_1059p29 [Vanderwaltozyma polyspora DSM
70294]
gi|156114834|gb|EDO16339.1| hypothetical protein Kpol_1059p29 [Vanderwaltozyma polyspora DSM
70294]
Length = 858
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 145/368 (39%), Gaps = 62/368 (16%)
Query: 277 GNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCG 336
GN N L+ SN + + K G + +L GPPG+GKTT AH+ AK G
Sbjct: 302 GNKGTINKLKTWLSNWDHAKSNGFKSPGRDGSGIYRAAMLYGPPGIGKTTAAHLIAKELG 361
Query: 337 YHVVEVNASDDRSSSTIENKILDVVQMNSVM-----------ADSRPKCLVIDEIDGALG 385
Y ++E NASD RS S + + + + S++ A + +++DE+DG G
Sbjct: 362 YDILEQNASDVRSKSLLNLGVKNALDNMSIVGYFKHKEEPSEAHGKKFVIIMDEVDGMSG 421
Query: 386 DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAP 445
+G V + + C+K S P+I ICN+ P
Sbjct: 422 GDRGGVGQLAQF----------------------------CRKTST--PMILICNERNQP 451
Query: 446 ALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
+R ++ F +P + + SRL I E K + L + T D+R +N L
Sbjct: 452 KMRPFDRVCLDVQFRRPDANSIKSRLMTIAIREKFKLDPNIIDKLVQSTRGDMRQIINLL 511
Query: 506 QFLDKKKEILNVMDIGS-QVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEF 564
+ K + +N +I K+++ FDI T RL + S SN F
Sbjct: 512 STISKTTKHINHENINEISQAWEKNVALKPFDI---------TLRLLSGQIYSDLGSNNF 562
Query: 565 DFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLK--------TVKCLDCLGNSDLMHQ 616
+ D+D I EN + + P LK D + DL+ +
Sbjct: 563 TLNDKIALYFDDFDFTPLMIQENYI---HSRPATLKNDETHLDAVAAAADSISLGDLVER 619
Query: 617 YIMRTQQM 624
I ++Q+
Sbjct: 620 KIRSSEQL 627
>gi|308480266|ref|XP_003102340.1| CRE-RFC-1 protein [Caenorhabditis remanei]
gi|308262006|gb|EFP05959.1| CRE-RFC-1 protein [Caenorhabditis remanei]
Length = 835
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 146/362 (40%), Gaps = 84/362 (23%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV-MADS 370
K LL G PG+GKTT A++A + GY +VE+NASD R+ +E KI ++ + +
Sbjct: 334 KAALLSGTPGVGKTTCAYMACQQLGYQLVEMNASDVRNKKHLEAKIGELSGSHQIEQFFG 393
Query: 371 RPKC-----------LVIDEIDGALG--DGKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
KC L++DE+DG G D G E+I + K+
Sbjct: 394 VKKCVPQDNLKVHHVLIMDEVDGMSGNEDRAGISELI---------------QIIKDS-- 436
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
KI P+ICICND P +RSL F +P V + SR+ IC+
Sbjct: 437 -KI-------------PIICICNDRQHPKIRSLANHCFDLRFSKPRVESIRSRMMTICSQ 482
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
E +K L L E + D+R + LQ K + V +KD + F+
Sbjct: 483 EKLKIKVEELDELIELSGHDVRQTIYNLQMRSKSAD---------SKVSKKDQAWGPFEA 533
Query: 538 WKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPV 597
+ + R T + E F+ DY ++ + EN L ++
Sbjct: 534 ARRLLDSRTTLMEK----------QEMFFV--------DYGIMPLFVQENYLNMKNDKHS 575
Query: 598 MLKTV----KCLDCLGNSDLMHQYI-------MRTQQMPLYVYQPPLAITVHRLVSQIQK 646
L+ + K D + DL+ + I + +Q L P +A H L S +Q
Sbjct: 576 QLQAIRGIRKAADFISLGDLVDKQIRGGGSWKLLNEQSMLSAALPAMATGGH-LKSMLQF 634
Query: 647 PN 648
P+
Sbjct: 635 PS 636
>gi|393215252|gb|EJD00743.1| DNA replication factor C, large subunit [Fomitiporia mediterranea
MF3/22]
Length = 967
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 92/210 (43%), Gaps = 46/210 (21%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKI-LDVVQMNSVMADS 370
+ +L+ GPPG+GKTT AH+ AK G+ +E+NASD RS +EN + ++ M+
Sbjct: 449 RAVLITGPPGIGKTTSAHLCAKLAGFTPIELNASDARSKKLVENSTNIANTSLDGWMSGK 508
Query: 371 R--PK-------------CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKED 415
R PK CL++DE+DG +G V + ++
Sbjct: 509 RTTPKTVNATGIEISDKSCLIMDEVDGMSAGDRGGVGALNSLI----------------- 551
Query: 416 QPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHIC 475
KK + P+ICI ND A L+ L F +P + V SR+ I
Sbjct: 552 -----------KKTKI--PIICIANDRNAQKLKPLLNTTFNLSFRKPDAAAVRSRIMTIA 598
Query: 476 NNESMKTSSIALTTLAEYTECDIRSCLNTL 505
E MK + + L + + DIR LN L
Sbjct: 599 FKEKMKIPANVVDQLVQGAQSDIRQVLNML 628
>gi|327400517|ref|YP_004341356.1| replication factor C large subunit [Archaeoglobus veneficus SNP6]
gi|327316025|gb|AEA46641.1| Replication factor C large subunit [Archaeoglobus veneficus SNP6]
Length = 502
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 159/365 (43%), Gaps = 69/365 (18%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMAD- 369
QK LL GPPG GKT+LA A G+ VVE+NASD R+ I + I+ + ++D
Sbjct: 38 QKPLLFAGPPGTGKTSLALAIANTFGWEVVELNASDQRNWRIIYH-IVGEGAFSETISDE 96
Query: 370 --------SRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKIS 421
R K +++DE+D KE+ E ++
Sbjct: 97 GEFLSIRQGRLKLIILDEVDNI----------------------HKKEDAGGEGALIRLL 134
Query: 422 KKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMK 481
KKK + P+I N+ Y + LR + ++ F + V RVV+ L+ IC E ++
Sbjct: 135 KKKPRQ------PIILTANEPYNLSA-ELRNLCEMITFRRLDVRRVVAVLERICAQEGIR 187
Query: 482 TSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEI 541
AL ++A D+R+ +N LQ + + K + V D+ V ++ F + ++I
Sbjct: 188 ADRRALESIARNAGGDLRAAINDLQAIAEGKTEIRVEDV---VTAKRTQETDVFKVMQKI 244
Query: 542 FQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKT 601
F+ ++SS V +E +++ + D I + I EN L L+Y +LK
Sbjct: 245 FK-----------TTSSAVYSE-----AMLLDESPDDFI-NWIDEN-LPLEYSGEDLLKG 286
Query: 602 VKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNA 661
L +D+ + R Q L+ Y L + + +Q+ E + + RYR
Sbjct: 287 YL---VLSRADIFLGRVRRRQFYRLWKYATYL------MTAGVQQVKKEARRGFTRYRRP 337
Query: 662 FMEKM 666
+ +M
Sbjct: 338 AIWQM 342
>gi|260827655|ref|XP_002608780.1| hypothetical protein BRAFLDRAFT_183645 [Branchiostoma floridae]
gi|229294132|gb|EEN64790.1| hypothetical protein BRAFLDRAFT_183645 [Branchiostoma floridae]
Length = 756
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 111/556 (19%), Positives = 211/556 (37%), Gaps = 134/556 (24%)
Query: 198 LWVDKYAPNSFTELLS---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTI 254
LWVDKY P + ++ D +++L WL+ W
Sbjct: 226 LWVDKYKPQTTKAIIGQQGDRSNVKKLLKWLQTWP------------------------- 260
Query: 255 SQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVL 314
K +DS FT R + FR +
Sbjct: 261 ---KHHSDSPFT--GRQVKEDGSGFRAA-------------------------------- 283
Query: 315 LLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM------- 367
LL GPPG+GKTT A + + G+ +E+NASD RS +++ ++ + + S++
Sbjct: 284 LLSGPPGVGKTTAATLCCQELGFTYIELNASDTRSKRSLQEEVSEALTTRSIVGFQKQGG 343
Query: 368 --ADSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKK 424
A + + +++DE+DG G + +G + ++ ++ +
Sbjct: 344 KDAGTMRQAVIMDEVDGMAGNEDRGGIAELINLIKHTKV--------------------- 382
Query: 425 GCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSS 484
P++C+CND +RSL F +P V ++ + + + E +K
Sbjct: 383 ---------PIVCMCNDRSHQKMRSLVNYCFDLRFQRPRVEQIRAAMMSMAFKEGLKIPP 433
Query: 485 IALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVV--GRKDMSRSAFDIWKEIF 542
AL + E T D+R ++ L + + L D + +KD+ + F++ +++F
Sbjct: 434 PALNQIIEATNHDVRQVIHQLYMWSVQDKAL-TFDQAKEASKQAQKDIKQGPFEVTRKVF 492
Query: 543 QKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTV 602
K + S N++ + + +Y + N ++ Q ++ +T
Sbjct: 493 SSGKDTARLTIMDKSDLFFNDYSMMPLFVQE--NYPNVLPNAARNNMKKQLS--LLSQTA 548
Query: 603 KCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAF 662
D + + DL+ + I Q L P AI L + + +L S+ + F
Sbjct: 549 ---DSICDGDLVDKLIRSRQSWGLL---PTQAIYASVLPGEYMRGHLSGMISFPGWLGQF 602
Query: 663 MEKMDIFKSWHSKIPPYISRHLST----ESLVEDSISPLLHILSPPTLRPVALHLLSAKE 718
K + + ++ ++ HL T +SL ED + P LR L+LL +E
Sbjct: 603 -SKQNRLRRLLQEL--HMHMHLRTSCTKKSLQEDYLDP---------LRRRILNLLVTQE 650
Query: 719 KNDLAQLVSAMVSYSL 734
+ + V + +Y L
Sbjct: 651 TEGVPEAVELLSAYDL 666
>gi|300706363|ref|XP_002995454.1| hypothetical protein NCER_101643 [Nosema ceranae BRL01]
gi|239604566|gb|EEQ81783.1| hypothetical protein NCER_101643 [Nosema ceranae BRL01]
Length = 598
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 105/447 (23%), Positives = 189/447 (42%), Gaps = 75/447 (16%)
Query: 307 GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV 366
G + + LL G PG+GKTT HV K G +VE NASD R+ S + K+ ++ +
Sbjct: 170 GKTKNRGALLSGSPGIGKTTSVHVLCKELGLDLVEFNASDVRNKSLLVKKVKGIINSQGI 229
Query: 367 MAD--SRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKK 424
+ K +++DE+DG D G VE+ +N KE++
Sbjct: 230 SKGLKLKKKIVLMDEVDGMTSDRGGLVEL----------NNLIKESII------------ 267
Query: 425 GCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSS 484
P++CICND +R+L F +P ++V R+K I +E+
Sbjct: 268 ---------PIVCICNDRNNIKIRTLANNCLDLKFRKPDSRQIVPRIKVILKHENKVLGD 318
Query: 485 IALTTLAEYTECDIRSCLNTLQFLDKKKEI-LNVMDIGSQVVGRKDMSRSAFDIWKEIFQ 543
+ + + DIR LN +Q + +I +N+M + +K + +S F+I E F
Sbjct: 319 NIINEVISLSHGDIRYILNNIQRICVNDKININLM----SSLTKKTILKSVFEIASECFH 374
Query: 544 KRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVK 603
+ S++ +++ E DY +I I EN ++L++ + ++ K
Sbjct: 375 GK-------SINEKTDLYFE------------DYSLIPLFIAENYMKLKFAN--LIDFYK 413
Query: 604 CLDCLGNSDLMHQYIMRTQQ----MPLYVYQPPLAITVHR-LVSQIQKPNLEWPKSYQRY 658
+ + + D++ + I + Q +PL+ + + T + L I P+ W RY
Sbjct: 414 SSESISSGDVVEKLIRGSTQEWSLLPLHGFFTVVLPTKDKALFKGIDFPS--WLGQNSRY 471
Query: 659 RNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPL--LHILSPPTLRPVALHLLSA 716
++ I K + Y++ L L + I L L+ L ++ A+ LL
Sbjct: 472 ----LKHQRIIKEVKRHVSKYVNSGLENFRLYDSYIIFLEILNFLKENNVKS-AIDLLKE 526
Query: 717 KE--KNDLAQLVSAMVSYSLTYKNTKS 741
+ K+D L ++ YK K+
Sbjct: 527 YDLIKDDFVNLSELLLDGQALYKEVKT 553
>gi|358332020|dbj|GAA29341.2| replication factor C subunit 1 [Clonorchis sinensis]
Length = 949
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 111/243 (45%), Gaps = 42/243 (17%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV--MA- 368
+ LL GPPG+GKT+ A +A G+ E+NASD RS +++ + + M ++ MA
Sbjct: 418 RAALLSGPPGIGKTSSATIACAELGFSTCELNASDCRSKTSLSEVVSQSLGMQNLAQMAY 477
Query: 369 ------DSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKIS 421
++ L++DE+DG G + +G ++ ++ M+ + R
Sbjct: 478 GEASQLSTKQHVLLMDEVDGMAGNEDRGGMQELINMIKSTRI------------------ 519
Query: 422 KKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMK 481
P+IC+CND +P +RSL F +P V ++ + + I E++
Sbjct: 520 ------------PIICMCNDRQSPKIRSLANYCYDLRFSRPRVEQIKAAVLSIACKENVT 567
Query: 482 TSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVG-RKDMSRSAFDIWKE 540
L + E + DIR +N Q + + + S G +KD+ AFD+ ++
Sbjct: 568 IQPSVLGDIIEASGHDIRQVINNTQMWSISG-LADQAQLTSDASGAQKDIRLGAFDVIRK 626
Query: 541 IFQ 543
+FQ
Sbjct: 627 VFQ 629
>gi|366989649|ref|XP_003674592.1| hypothetical protein NCAS_0B01320 [Naumovozyma castellii CBS 4309]
gi|342300456|emb|CCC68216.1| hypothetical protein NCAS_0B01320 [Naumovozyma castellii CBS 4309]
Length = 871
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 104/240 (43%), Gaps = 46/240 (19%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV----- 366
+ +L GPPG+GKTT AH+ AK GY ++E NASD RS S + + + + SV
Sbjct: 357 RTAMLYGPPGIGKTTAAHLVAKELGYDILEQNASDVRSKSLLNAGVKNALDNMSVVGFFK 416
Query: 367 ----MADSRPKCLVI--DEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
+AD K VI DE+DG G +G V + +
Sbjct: 417 HKDDLADENGKRFVIIMDEVDGMSGGDRGGVGQLAQF----------------------- 453
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
C+K S P+I ICN+ P +R ++ F +P + V SRL I E
Sbjct: 454 -----CRKTST--PMILICNERNLPKMRPFDRVCLDLQFRRPDANSVKSRLMTIAIREGF 506
Query: 481 KTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEIL---NVMDIGSQVVGRKDMSRSAFDI 537
K + L + T DIR +N L + K + + N+ I S K+++ FDI
Sbjct: 507 KLDPNVIDKLIQTTRGDIRQIINLLSTISKTTKSIGHDNIKAISS--AWEKNIALKPFDI 564
>gi|338723476|ref|XP_001495351.3| PREDICTED: replication factor C subunit 1 [Equus caballus]
Length = 1177
Score = 89.4 bits (220), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 140/363 (38%), Gaps = 101/363 (27%)
Query: 194 VHEQLWVDKYAPNSFTELLS---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRR 250
V LWVDKY P S ++ D+ ++L WL+ W +S SEE ++
Sbjct: 610 VENLLWVDKYKPLSLKTIIGQQGDQSCANKLLRWLQNWH--------KSPSEE-----KK 656
Query: 251 HSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPE 310
H+ F K+ G+ +
Sbjct: 657 HAA-------KFGKFAGKDDGSSF------------------------------------ 673
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-- 368
K LL GPPG+GKTT A + + GY VE+NASD RS ++++ + + + S+
Sbjct: 674 -KAALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKNSLKEIVAESLNNTSIKGFY 732
Query: 369 -------DSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
S L++DE+DG G + +G ++ ++ ++ + KI
Sbjct: 733 SSGLAHSGSMKHALLMDEVDGMAGNEDRGGIQELIGLI-----------------KHTKI 775
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
P+IC+CND P +RSL F +P V ++ + I E +
Sbjct: 776 -------------PIICMCNDRNHPKIRSLIHYCFDLRFQRPRVEQIKGAMMSIAFKEGL 822
Query: 481 KTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV-VGRKDMSRSAFDIWK 539
K A+ + DIR L+ L + + L + +KD+ FD+ +
Sbjct: 823 KIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRAKKDIKLGPFDVAR 882
Query: 540 EIF 542
++F
Sbjct: 883 KVF 885
>gi|452824090|gb|EME31095.1| replication factor C subunit 1 [Galdieria sulphuraria]
Length = 758
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 113/247 (45%), Gaps = 37/247 (14%)
Query: 303 TRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQ 362
+++ G K +LL GPPG+GKTT A + +K GY +E NASD R+ + + + + V+
Sbjct: 253 SKNKGKSSPKAVLLSGPPGIGKTTAALLVSKELGYFPMEFNASDTRNRAIVSSTVGSVIN 312
Query: 363 MNSVMADSRPK----CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPE 418
++ + K +++DE+DG +G ++ +++++
Sbjct: 313 NQTLNQFGKDKTTSSVIIMDEVDGMSAGDRGGIQELIQLI-------------------- 352
Query: 419 KISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNE 478
KK S+ P++CICND + +RSL + +P S++ SRL IC E
Sbjct: 353 --------KKTSV--PIVCICNDDSSVKVRSLANYCLKLKWRRPLASQLRSRLLEICKKE 402
Query: 479 SMK-TSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVV--GRKDMSRSAF 535
+ + L + E D+R LN LQ L D+ ++ G+ S F
Sbjct: 403 GFENVDTQTLEKIVESCHGDMRQILNLLQSWRSHSRNLTYSDVLERMKQDGKTYEEMSIF 462
Query: 536 DIWKEIF 542
++ K +F
Sbjct: 463 ELVKSLF 469
>gi|148705785|gb|EDL37732.1| replication factor C 1, isoform CRA_a [Mus musculus]
Length = 1160
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 144/361 (39%), Gaps = 106/361 (29%)
Query: 198 LWVDKYAPNSFTELLS---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTI 254
LWVDKY P S ++ D+ ++L WL+ W +S+ EE ++H+
Sbjct: 599 LWVDKYKPASLKNIIGQQGDQSCANKLLRWLRNWH--------KSSPEE-----KKHAKF 645
Query: 255 SQNKKQND-SSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKV 313
+ ++D SSF K
Sbjct: 646 GKLASKDDGSSF----------------------------------------------KA 659
Query: 314 LLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV----MAD 369
LL GPPG+GKTT A + + GY VE+NASD RS ++++ + + + S+ +
Sbjct: 660 ALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKNSLKAVVAESLNNTSIKGFYTSG 719
Query: 370 SRPK-----CLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKK 423
+ P L++DE+DG G + +G ++ ++ ++ + KI
Sbjct: 720 AAPSVSARHALIMDEVDGMAGNEDRGGIQELIGLI-----------------KHTKI--- 759
Query: 424 KGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTS 483
P+IC+CND P +RSL F +P V ++ S + I E +K
Sbjct: 760 ----------PIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKSAMLSIAFKEGLKIP 809
Query: 484 SIALTTLAEYTECDIRSCLNTLQFLDKKKEILNV--MDIGSQVVGRKDMSRSAFDIWKEI 541
A+ + D+R L+ L + + L SQ +KD+ FD+ +++
Sbjct: 810 PPAMNEIILGANQDVRQVLHNLSMWCAQSKALTYDQAKADSQRA-KKDIRLGPFDVTRKV 868
Query: 542 F 542
F
Sbjct: 869 F 869
>gi|254168911|ref|ZP_04875751.1| ATPase, AAA family protein [Aciduliprofundum boonei T469]
gi|197622175|gb|EDY34750.1| ATPase, AAA family protein [Aciduliprofundum boonei T469]
Length = 437
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 145/347 (41%), Gaps = 67/347 (19%)
Query: 307 GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV 366
G P K L+L G PG GKTT A A G+ V+E+NASD R+ I+ L +
Sbjct: 37 GKPSYKALILVGKPGCGKTTTARALANEMGWGVIELNASDVRNEEKIKQIALRGAIYETF 96
Query: 367 MADSR--------PKCLVIDEIDG---ALGDG-KGAVEVILKMVSAERKSNTAKENVAKE 414
D + K ++ DE D + DG +G + I++ + A ++
Sbjct: 97 TDDGKFISTRKGGRKLIIFDEADNLYEGVKDGDRGGKKAIVETIKASKQ----------- 145
Query: 415 DQPEKISKKKGCKKASLLRPVICICNDLY----APALRSLRQIAKVHVFIQPSVSRVVSR 470
P+I I ND Y + L+ +AKV F + +++V
Sbjct: 146 -------------------PIILIGNDYYSITSGTWGKVLKSVAKVVKFRAVNRAQIVKV 186
Query: 471 LKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDM 530
L+ IC E +K L +A + D+R+ +N LQ + + K+++ D+ + +G +D+
Sbjct: 187 LRRICAAEGIKCQDEVLKYIAGKSGGDLRAAINDLQAIAEGKKVVTEDDVAA--LGYRDV 244
Query: 531 SRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQ 590
+I+K T+ + S +N+ DF+ I EN +
Sbjct: 245 KN---EIYKTTLVILHTEHFWEAKSMLNNLDETPDFVMLWID-------------EN-MP 287
Query: 591 LQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITV 637
L+Y P L V+ + L +D++ +MR Q L+ Y + V
Sbjct: 288 LEYTKPGDL--VRAYEYLSKADVLLGRVMRRQHYALWSYAMDMIAAV 332
>gi|256071069|ref|XP_002571864.1| chromosome transmission fidelity factor [Schistosoma mansoni]
Length = 1015
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 140/330 (42%), Gaps = 76/330 (23%)
Query: 298 SWHK--------KTRSTGPPE----------QKVLLLCGPPGLGKTTLAHVAAKHCGYHV 339
SWH K S+ PP + LL GPPG+GKT+ A + K GY
Sbjct: 445 SWHSDFSAGLKAKAYSSAPPWGPSSSDDGKWARAALLSGPPGIGKTSTAILVCKQLGYTY 504
Query: 340 VEVNASDDRSSSTIENKILDVVQMNSV--MA-------DSRPKCLVIDEIDGALG-DGKG 389
E NASD RS + +I + + ++ MA +S L++DE+DG G + +G
Sbjct: 505 CEFNASDCRSKRCLSEEIGQSLGLRNLSHMAFGQASTLNSGHHVLIMDEVDGMAGNEDRG 564
Query: 390 AVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRS 449
++ ++ M+ KI++ P+IC+CND A +RS
Sbjct: 565 GMQELINMI--------------------KITQ----------LPIICMCNDRQAIKIRS 594
Query: 450 LRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLD 509
L F +P V ++ S + I E++ LT + + + DIR +N +Q
Sbjct: 595 LANYCLDLRFHRPRVEQIKSAVLSIACKENVNLPPDVLTNIIDSSNHDIRQVINNVQMWC 654
Query: 510 KK----KEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFD 565
E L + +G+ RKD+ +AFD+ +++F + S S + + D
Sbjct: 655 SSGLIDSEGLKMDALGA----RKDLHLNAFDVIRKVF----APDISGSQGSVATFNESLD 706
Query: 566 FLHSLISNRGDYDVIFDGIHENILQLQYHD 595
DY++I + EN L ++ H+
Sbjct: 707 LFFQ------DYNLIPLFVEENYLNVRVHN 730
>gi|426232162|ref|XP_004010103.1| PREDICTED: replication factor C subunit 1 [Ovis aries]
Length = 1390
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 106/508 (20%), Positives = 186/508 (36%), Gaps = 149/508 (29%)
Query: 194 VHEQLWVDKYAPNSFTELLS---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRR 250
V LWVDKY P S ++ D+ ++L WL+ W
Sbjct: 823 VESLLWVDKYKPTSLKTIIGQQGDQSCANKLLRWLQNW---------------------- 860
Query: 251 HSTISQNKKQND--SSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGP 308
H + S++KK F K+ G+ +
Sbjct: 861 HKSPSEDKKHAAKFGKFAGKDDGSSF---------------------------------- 886
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNS--- 365
K LL GPPG+GKTT A + + GY VE+NASD RS ++++ + + + S
Sbjct: 887 ---KAALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKNSLKEIVAESLNNTSIKG 943
Query: 366 ------VMADSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPE 418
V + L++DE+DG G + +G ++ ++ ++ +
Sbjct: 944 FYSSGTVHSVGTRHALIMDEVDGMAGNEDRGGIQELIGLI-----------------KHT 986
Query: 419 KISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNE 478
KI P+IC+CND P +RSL F +P V ++ + I E
Sbjct: 987 KI-------------PIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAMMSIAFKE 1033
Query: 479 SMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV-VGRKDMSRSAFDI 537
+K A+ + DIR L+ L + + L + +KD+ FD+
Sbjct: 1034 GLKIPPPAMNEIILGANQDIRQVLHNLNMWCARNKALTYDQAKADSHRAKKDVKLGPFDV 1093
Query: 538 WKEIFQKRKTKRLRNSVSSSSNVSNEFD-FLHSLISNRGDYDVIFDGIHENILQLQYHDP 596
+++F + ++ ++ ++ D F H DY + + EN + ++ P
Sbjct: 1094 ARKVF-------VTGEETAHMSLMDKSDLFFH-------DYSIAPLFVQENYIHVK---P 1136
Query: 597 V---------MLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKP 647
V ++ + D + + DL+ + I Q L P AI L ++ +
Sbjct: 1137 VAAGGDMKKHLMLLSRAADSICDGDLVDRQIRNKQNWSLL---PTQAIYASVLPGELMR- 1192
Query: 648 NLEWPKSYQRYRNAFMEKMDIFKSWHSK 675
+M + F SW K
Sbjct: 1193 -------------GYMTQFPTFPSWLGK 1207
>gi|57530056|ref|NP_001006456.1| replication factor C subunit 1 [Gallus gallus]
gi|53130644|emb|CAG31651.1| hypothetical protein RCJMB04_9c6 [Gallus gallus]
Length = 1147
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 112/267 (41%), Gaps = 52/267 (19%)
Query: 298 SWHKKTRSTGPPEQ------------KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNAS 345
SWHK T G + K LL GPPG+GKTT A + K GY VE+NAS
Sbjct: 615 SWHKNTSEDGQAKTNKSGGKDDGASFKAALLSGPPGVGKTTTASLVCKELGYSYVELNAS 674
Query: 346 DDRSSSTIENKILDVVQMNSVM--------ADSRPKCLVIDEIDGALG-DGKGAVEVILK 396
D RS ++++ + + + S+ + S L++DE+DG G + +G ++ ++
Sbjct: 675 DTRSKNSLKEVVAESLNNTSIKDFCSGTSSSVSGKHVLIMDEVDGMAGNEDRGGIQELIG 734
Query: 397 MVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKV 456
++ + P+IC+CND P +RSL
Sbjct: 735 LIRHTK------------------------------VPIICMCNDRNHPKIRSLVHYCFD 764
Query: 457 HVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILN 516
F +P + ++ + I E +K A+ + DIR L+ L K + L
Sbjct: 765 LRFQRPRLEQIKGAMMSIAFKEGLKIPPPAMNEIILAANQDIRQVLHNLNMWCAKDKSLT 824
Query: 517 VMDIGSQVV-GRKDMSRSAFDIWKEIF 542
+ + +KD+ FD+ +++F
Sbjct: 825 YDEAKTDASRAKKDIKLGPFDVVRKVF 851
>gi|449550173|gb|EMD41138.1| hypothetical protein CERSUDRAFT_131701, partial [Ceriporiopsis
subvermispora B]
Length = 920
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 97/220 (44%), Gaps = 42/220 (19%)
Query: 298 SWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDR------SSS 351
S KK +G + +L+ GPPG+GKTT AH+ AK G+ +E+NASD R SS+
Sbjct: 380 SGFKKPGKSGMNVFRAVLITGPPGIGKTTSAHLCAKLEGFTPIELNASDARSKKLVESST 439
Query: 352 TIENKILDVVQMNSV------MADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSN 405
I N LD + +A + CL++DE+DG +G V + ++
Sbjct: 440 NIMNASLDGWMVGGAATNAAGVAITDKSCLIMDEVDGMSAGDRGGVGALTALI------- 492
Query: 406 TAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVS 465
KK + P+ICI ND A L+ L + F +P +
Sbjct: 493 ---------------------KKTKI--PIICIANDRGAMKLKPLANVTYNLTFRKPEAN 529
Query: 466 RVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
+ SR+ I E+MK + + L + DIR LN L
Sbjct: 530 VIRSRILSIAFKENMKIPANVIDQLITGAQSDIRQVLNML 569
>gi|1022776|gb|AAA79698.1| differentiation specific element binding protein [Mus musculus]
Length = 1130
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 144/361 (39%), Gaps = 106/361 (29%)
Query: 198 LWVDKYAPNSFTELLS---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTI 254
LWVDKY P S ++ D+ ++L WL+ W +S+ EE ++H+
Sbjct: 569 LWVDKYKPASLKNIIGQQGDQSCANKLLRWLRNWH--------KSSPEE-----KKHAKF 615
Query: 255 SQNKKQND-SSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKV 313
+ ++D SSF K
Sbjct: 616 GKLASKDDGSSF----------------------------------------------KA 629
Query: 314 LLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV----MAD 369
LL GPPG+GKTT A + + GY VE+NASD RS ++++ + + + S+ +
Sbjct: 630 ALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKNSLKAVVAESLNNTSIKGFYTSG 689
Query: 370 SRPK-----CLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKK 423
+ P L++DE+DG G + +G ++ ++ ++ + KI
Sbjct: 690 AAPSVSARHALIMDEVDGMAGNEDRGGIQELIGLI-----------------KHTKI--- 729
Query: 424 KGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTS 483
P+IC+CND P +RSL F +P V ++ S + I E +K
Sbjct: 730 ----------PIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKSAMLSIAFKEGLKIP 779
Query: 484 SIALTTLAEYTECDIRSCLNTLQFLDKKKEILNV--MDIGSQVVGRKDMSRSAFDIWKEI 541
A+ + D+R L+ L + + L SQ +KD+ FD+ +++
Sbjct: 780 PPAMNEIILGANQDVRQVLHNLSMWCAQSKALTYDQAKADSQRA-KKDIRLGPFDVTRKV 838
Query: 542 F 542
F
Sbjct: 839 F 839
>gi|410957802|ref|XP_003985513.1| PREDICTED: replication factor C subunit 1 [Felis catus]
Length = 1474
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 139/364 (38%), Gaps = 104/364 (28%)
Query: 194 VHEQLWVDKYAPNSFTELLS---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRR 250
V LWVDKY P S ++ D+ ++L WL+ W
Sbjct: 908 VENLLWVDKYKPTSLKTIIGQQGDQSCANKLLRWLQNW---------------------- 945
Query: 251 HSTISQNKKQND-SSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPP 309
H + S++KK+ F K+ G+ +
Sbjct: 946 HKSPSEDKKRAKFGKFAGKDDGSSF----------------------------------- 970
Query: 310 EQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA- 368
K LL GPPG+GKTT A + + GY VE+NASD RS ++++ I + + S+
Sbjct: 971 --KAALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKNSLKEIIAESLNNTSITGF 1028
Query: 369 --------DSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEK 419
S +++DE+DG G + +G ++ ++ ++ + K
Sbjct: 1029 YSSGGAHSVSMKHAVIMDEVDGMAGNEDRGGIQELIGLI-----------------KHTK 1071
Query: 420 ISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNES 479
I P+IC+CND P +RSL F +P V ++ + I E
Sbjct: 1072 I-------------PIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAMMSIAFKEG 1118
Query: 480 MKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV-VGRKDMSRSAFDIW 538
+K A+ + DIR L+ L + + L + +KD+ FD+
Sbjct: 1119 LKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRAKKDIKLGPFDVA 1178
Query: 539 KEIF 542
+++F
Sbjct: 1179 RKVF 1182
>gi|430813749|emb|CCJ28936.1| unnamed protein product [Pneumocystis jirovecii]
Length = 390
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 158/365 (43%), Gaps = 64/365 (17%)
Query: 474 ICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRS 533
IC E + ++ LTTL ++++ + RSCLN LQF K EI D++ +
Sbjct: 4 ICKIEGLSINTQILTTLVKFSKMNFRSCLNALQFY-KTNEI--------------DLTMN 48
Query: 534 AFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQY 593
+ DI KTK ++S + N+ E ++ I N GDY+ + + L Y
Sbjct: 49 SLDI-------VKTKLKKDSSKKNYNIFME---IYETIQNYGDYEKLINNCFMQYLFQDY 98
Query: 594 HDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQ-------- 645
D K + D L D+++ I Q + L Y + H L ++
Sbjct: 99 KDDRFSKPILIGDWLFFFDILNSSIYERQNIELLSYLAFPLLIFHMLFISVKYDYKHNYQ 158
Query: 646 ---KPNLEWP-KSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHIL 701
K N +W + QR N +I+ S + P + + +SL+ D + L++IL
Sbjct: 159 QNLKQNSDWELYNLQRINN------EIYASLYYGSVPCLQQIFCLKSLLIDVVPYLVYIL 212
Query: 702 SPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSF 761
P LRP+ L L+ EK L ++++ M+ +++ Y TK+D F
Sbjct: 213 LPK-LRPINLQLIKNTEKQALNRVINNMIYFNINYSQTKTD-----------DGTFIYKF 260
Query: 762 DPPINEFITFKGYRSNHYVL-ALAVKQVLVHEVE-------KQRIMQVTIGKSEHLADGY 813
+PPI ITF + + + ++ Q++ E+E KQR + + KS ++ GY
Sbjct: 261 EPPIETLITFAFLKKHEPIFPKYSICQIINMELENEKLRIQKQRYNKDS-NKSLNVTSGY 319
Query: 814 KENMD 818
K D
Sbjct: 320 KRKSD 324
>gi|254166710|ref|ZP_04873564.1| ATPase, AAA family protein [Aciduliprofundum boonei T469]
gi|289596184|ref|YP_003482880.1| ATPase AAA [Aciduliprofundum boonei T469]
gi|197624320|gb|EDY36881.1| ATPase, AAA family protein [Aciduliprofundum boonei T469]
gi|289533971|gb|ADD08318.1| AAA ATPase central domain protein [Aciduliprofundum boonei T469]
Length = 437
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 145/348 (41%), Gaps = 67/348 (19%)
Query: 306 TGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNS 365
G P K L+L G PG GKTT A A G+ V+E+NASD R+ I+ L +
Sbjct: 36 AGKPSYKALILVGKPGCGKTTTARALANEMGWGVIELNASDVRNEEKIKQIALRGAIYET 95
Query: 366 VMADSR--------PKCLVIDEIDG---ALGDG-KGAVEVILKMVSAERKSNTAKENVAK 413
D + K ++ DE D + DG +G + I++ + A ++
Sbjct: 96 FTDDGKFISTRKGGRKLIIFDEADNLYEGVKDGDRGGKKAIVETIKASKQ---------- 145
Query: 414 EDQPEKISKKKGCKKASLLRPVICICNDLY----APALRSLRQIAKVHVFIQPSVSRVVS 469
P+I I ND Y + L+ +AKV F + +++V
Sbjct: 146 --------------------PIILIGNDYYSITGGTWGKVLKSVAKVVKFRAVNRAQIVK 185
Query: 470 RLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKD 529
L+ IC E +K L +A + D+R+ +N LQ + + K+++ D+ + +G +D
Sbjct: 186 VLRRICAAEGIKCQDEVLKYIAGKSGGDLRAAINDLQAIAEGKKVVTEDDVAA--LGYRD 243
Query: 530 MSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENIL 589
+ +I+K T+ + S +N+ DF+ I EN +
Sbjct: 244 VKN---EIYKTTLVILHTEHFWEAKSMLNNLDETPDFVMLWID-------------EN-M 286
Query: 590 QLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITV 637
L+Y P L V+ + L +D++ +MR Q L+ Y + V
Sbjct: 287 PLEYTKPGDL--VRAYEYLSKADVLLGRVMRRQHYALWSYAMDMIAAV 332
>gi|359066411|ref|XP_003586244.1| PREDICTED: replication factor C subunit 1-like [Bos taurus]
Length = 1127
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 138/365 (37%), Gaps = 105/365 (28%)
Query: 194 VHEQLWVDKYAPNSFTELLS---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRR 250
V LWVDKY P S ++ D+ ++L WL+ W
Sbjct: 560 VESLLWVDKYKPTSLKTIIGQQGDQSCANKLLRWLQNW---------------------- 597
Query: 251 HSTISQNKKQND--SSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGP 308
H + S++KK F K+ G+ +
Sbjct: 598 HKSPSEDKKHAAKFGKFAGKDDGSSF---------------------------------- 623
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNS--- 365
K LL GPPG+GKTT A + + GY VE+NASD RS ++++ + + + S
Sbjct: 624 ---KAALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKNSLKEIVAESLNNTSIKG 680
Query: 366 ------VMADSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPE 418
V + L++DE+DG G + +G ++ ++ ++ +
Sbjct: 681 FYSSGTVHSVGTRHALIMDEVDGMAGNEDRGGIQELIGLI-----------------KHT 723
Query: 419 KISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNE 478
KI P+IC+CND P +RSL F +P V ++ + I E
Sbjct: 724 KI-------------PIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAMMSIAFKE 770
Query: 479 SMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV-VGRKDMSRSAFDI 537
+K A+ + DIR L+ L + + L + +KD+ FD+
Sbjct: 771 GLKIPPPAMNEIILGANQDIRQVLHNLNMWCARNKALTYDQAKADSHRAKKDIKLGPFDV 830
Query: 538 WKEIF 542
+++F
Sbjct: 831 ARKVF 835
>gi|148705786|gb|EDL37733.1| replication factor C 1, isoform CRA_b [Mus musculus]
Length = 1157
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 144/361 (39%), Gaps = 106/361 (29%)
Query: 198 LWVDKYAPNSFTELLS---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTI 254
LWVDKY P S ++ D+ ++L WL+ W +S+ EE ++H+
Sbjct: 595 LWVDKYKPASLKNIIGQQGDQSCANKLLRWLRNWH--------KSSPEE-----KKHAKF 641
Query: 255 SQNKKQND-SSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKV 313
+ ++D SSF K
Sbjct: 642 GKLASKDDGSSF----------------------------------------------KA 655
Query: 314 LLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV----MAD 369
LL GPPG+GKTT A + + GY VE+NASD RS ++++ + + + S+ +
Sbjct: 656 ALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKNSLKAVVAESLNNTSIKGFYTSG 715
Query: 370 SRPK-----CLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKK 423
+ P L++DE+DG G + +G ++ ++ ++ + KI
Sbjct: 716 AAPSVSARHALIMDEVDGMAGNEDRGGIQELIGLI-----------------KHTKI--- 755
Query: 424 KGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTS 483
P+IC+CND P +RSL F +P V ++ S + I E +K
Sbjct: 756 ----------PIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKSAMLSIAFKEGLKIP 805
Query: 484 SIALTTLAEYTECDIRSCLNTLQFLDKKKEILNV--MDIGSQVVGRKDMSRSAFDIWKEI 541
A+ + D+R L+ L + + L SQ +KD+ FD+ +++
Sbjct: 806 PPAMNEIILGANQDVRQVLHNLSMWCAQSKALTYDQAKADSQRA-KKDIRLGPFDVTRKV 864
Query: 542 F 542
F
Sbjct: 865 F 865
>gi|224007511|ref|XP_002292715.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971577|gb|EED89911.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 1233
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 105/241 (43%), Gaps = 50/241 (20%)
Query: 284 NLEYENSNSKGIQDSWHKKTRSTGPPEQ--KVLLLCGPPGLGKTTLAHVAAKHCGYHVVE 341
N E++ +N K +K +S P K LL GPPG+GKTT A + A+ G ++E
Sbjct: 663 NWEHQFNNPK-------RKVKSVSGPNGPWKAALLSGPPGIGKTTTATLVARESGRDLLE 715
Query: 342 VNASDDRSSSTIENKILDVVQ---MNSVMADSRPK------CLVIDEIDG-ALGDGKGAV 391
+NASD RS ++ + DV +N D + K C+++DE+DG GD G
Sbjct: 716 LNASDARSKKSLSQALGDVTGSQVLNFRTGDGKVKHVAQKRCIIMDEVDGMGAGDRSGMS 775
Query: 392 EVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLR 451
E+I +M+ + P+ICICND + ++SL
Sbjct: 776 ELI-QMIKNSK------------------------------VPIICICNDRSSQKMKSLV 804
Query: 452 QIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKK 511
Q F +P+ + R I E M+ A ++E DIR LN +Q K
Sbjct: 805 QYCMDLRFQRPNKKTIGRRAVEIGRVEGMEVEENAAEAMSESCGNDIRQVLNCMQMWSCK 864
Query: 512 K 512
K
Sbjct: 865 K 865
>gi|358412675|ref|XP_003582372.1| PREDICTED: replication factor C subunit 1-like, partial [Bos
taurus]
Length = 1126
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 138/365 (37%), Gaps = 105/365 (28%)
Query: 194 VHEQLWVDKYAPNSFTELLS---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRR 250
V LWVDKY P S ++ D+ ++L WL+ W
Sbjct: 559 VESLLWVDKYKPTSLKTIIGQQGDQSCANKLLRWLQNW---------------------- 596
Query: 251 HSTISQNKKQND--SSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGP 308
H + S++KK F K+ G+ +
Sbjct: 597 HKSPSEDKKHAAKFGKFAGKDDGSSF---------------------------------- 622
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNS--- 365
K LL GPPG+GKTT A + + GY VE+NASD RS ++++ + + + S
Sbjct: 623 ---KAALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKNSLKEIVAESLNNTSIKG 679
Query: 366 ------VMADSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPE 418
V + L++DE+DG G + +G ++ ++ ++ +
Sbjct: 680 FYSSGTVHSVGTRHALIMDEVDGMAGNEDRGGIQELIGLI-----------------KHT 722
Query: 419 KISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNE 478
KI P+IC+CND P +RSL F +P V ++ + I E
Sbjct: 723 KI-------------PIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAMMSIAFKE 769
Query: 479 SMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV-VGRKDMSRSAFDI 537
+K A+ + DIR L+ L + + L + +KD+ FD+
Sbjct: 770 GLKIPPPAMNEIILGANQDIRQVLHNLNMWCARNKALTYDQAKADSHRAKKDIKLGPFDV 829
Query: 538 WKEIF 542
+++F
Sbjct: 830 ARKVF 834
>gi|460932|gb|AAC52140.1| ISRE-binding protein [Mus musculus]
Length = 1145
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 143/360 (39%), Gaps = 104/360 (28%)
Query: 198 LWVDKYAPNSFTELLS---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTI 254
LWVDKY P S ++ D+ ++L WL+ W +S+ EE ++H+
Sbjct: 583 LWVDKYKPASLKNIIGQQGDQSCANKLLRWLRNWH--------KSSPEE-----KKHAKF 629
Query: 255 SQNKKQND-SSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKV 313
+ ++D SSF K
Sbjct: 630 GKLASKDDGSSF----------------------------------------------KA 643
Query: 314 LLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV----MAD 369
LL GPPG+GKTT A + + GY VE+NASD RS ++++ + + + S+ +
Sbjct: 644 ALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKNSLKAVVAESLNNTSIKGFYTSG 703
Query: 370 SRPK-----CLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKK 423
+ P L++DE+DG G + +G ++ ++ ++ + KI
Sbjct: 704 AAPSVSARHALIMDEVDGMAGNEDRGGIQELIGLI-----------------KHTKI--- 743
Query: 424 KGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTS 483
P+IC+CND P +RSL F +P V ++ S + I E +K
Sbjct: 744 ----------PIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKSAMLSIAFKEGLKIP 793
Query: 484 SIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVV-GRKDMSRSAFDIWKEIF 542
A+ + D+R L+ L + + L + +KD+ FD+ +++F
Sbjct: 794 PPAMNEIILGANQDVRQVLHNLSMWCAQSKALTYDQAKADSQRAKKDIRLGPFDVTRKVF 853
>gi|15897671|ref|NP_342276.1| replication factor C large subunit [Sulfolobus solfataricus P2]
gi|284174996|ref|ZP_06388965.1| replication factor C large subunit [Sulfolobus solfataricus 98/2]
gi|384434285|ref|YP_005643643.1| AAA ATPase [Sulfolobus solfataricus 98/2]
gi|42559540|sp|Q9UXF6.1|RFCL_SULSO RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit;
AltName: Full=SsoRFC large subunit
gi|6015707|emb|CAB57534.1| replication factor C, large subunit [Sulfolobus solfataricus P2]
gi|13813942|gb|AAK41066.1| Activator 1, replication factor C (RFC) large subunit (rfcL)
[Sulfolobus solfataricus P2]
gi|261602439|gb|ACX92042.1| AAA ATPase central domain protein [Sulfolobus solfataricus 98/2]
Length = 405
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 126/285 (44%), Gaps = 53/285 (18%)
Query: 307 GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV 366
G K +LL GPPG+GKT LA A + ++E+NASD R I++ I + +
Sbjct: 36 GNSNVKAVLLHGPPGVGKTVLAEALAHDYNFELLEMNASDSRKLQDIKS-IAEKAAVYGS 94
Query: 367 MADSRPKCLVIDEIDGA-LGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKG 425
+ ++ K +++DE+DG + + GA++ IL+++ +
Sbjct: 95 IFGTKGKLILLDEVDGINVREDTGAIQGILELIEKTK----------------------- 131
Query: 426 CKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSI 485
P+I ND + P LR LR AK+ + + LK IC E +
Sbjct: 132 -------YPIIMTANDPWNPGLRELRNKAKMIELSKLGKYPLRRILKKICQAEKIICDDE 184
Query: 486 ALTTLAEYTECDIRSCLNTLQFLDK--KKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQ 543
AL + + +E D R +N LQ + + K LN+++ + RK+ F+ ++IF
Sbjct: 185 ALNYIIDSSEGDARYAINILQGIGEGYGKVTLNLVE---SLAKRKERELDPFETLRDIFW 241
Query: 544 KRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENI 588
R + +N+ +S+ + DYD++ I ENI
Sbjct: 242 ARYAWQAKNAATSA----------------QIDYDMLIRWISENI 270
>gi|353228574|emb|CCD74745.1| putative chromosome transmission fidelity factor [Schistosoma
mansoni]
Length = 1386
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 140/330 (42%), Gaps = 76/330 (23%)
Query: 298 SWHK--------KTRSTGPPE----------QKVLLLCGPPGLGKTTLAHVAAKHCGYHV 339
SWH K S+ PP + LL GPPG+GKT+ A + K GY
Sbjct: 445 SWHSDFSAGLKAKAYSSAPPWGPSSSDDGKWARAALLSGPPGIGKTSTAILVCKQLGYTY 504
Query: 340 VEVNASDDRSSSTIENKILDVVQMNSV--MA-------DSRPKCLVIDEIDGALG-DGKG 389
E NASD RS + +I + + ++ MA +S L++DE+DG G + +G
Sbjct: 505 CEFNASDCRSKRCLSEEIGQSLGLRNLSHMAFGQASTLNSGHHVLIMDEVDGMAGNEDRG 564
Query: 390 AVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRS 449
++ ++ M+ KI++ P+IC+CND A +RS
Sbjct: 565 GMQELINMI--------------------KITQ----------LPIICMCNDRQAIKIRS 594
Query: 450 LRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLD 509
L F +P V ++ S + I E++ LT + + + DIR +N +Q
Sbjct: 595 LANYCLDLRFHRPRVEQIKSAVLSIACKENVNLPPDVLTNIIDSSNHDIRQVINNVQMWC 654
Query: 510 KK----KEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFD 565
E L + +G+ RKD+ +AFD+ +++F + S S + + D
Sbjct: 655 SSGLIDSEGLKMDALGA----RKDLHLNAFDVIRKVF----APDISGSQGSVATFNESLD 706
Query: 566 FLHSLISNRGDYDVIFDGIHENILQLQYHD 595
DY++I + EN L ++ H+
Sbjct: 707 LFFQ------DYNLIPLFVEENYLNVRVHN 730
>gi|150864993|ref|XP_001384033.2| hypothetical protein PICST_35815 [Scheffersomyces stipitis CBS
6054]
gi|149386249|gb|ABN66004.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 764
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 95/215 (44%), Gaps = 49/215 (22%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA--- 368
+ L+ GPPG+GKT+ AH+ AK G+ ++E NASD RS S + + + V+ SV+
Sbjct: 257 RACLISGPPGIGKTSAAHLVAKSLGFDILEKNASDVRSKSLLNSNLKSVLTNTSVVGFFK 316
Query: 369 ----------DSRPKCLVIDEIDG-ALGD--GKGAVEVILKMVSAERKSNTAKENVAKED 415
+ R CL++DE+DG + GD G GA+ K+
Sbjct: 317 HRDENIQHTQNDRRFCLIMDEVDGMSSGDHGGAGALSAFCKITHM--------------- 361
Query: 416 QPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHIC 475
P+I ICND P +R+ ++ F +PS + + SRL I
Sbjct: 362 ------------------PMILICNDKSLPKMRTFDRVTLDLPFRRPSEAEMKSRLMSIA 403
Query: 476 NNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDK 510
E +K + L + T DIR +N L + K
Sbjct: 404 LREKIKLDPTVIGQLVQATGNDIRQIINLLSTVSK 438
>gi|388855019|emb|CCF51346.1| related to replication factor C protein [Ustilago hordei]
Length = 980
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 96/233 (41%), Gaps = 44/233 (18%)
Query: 298 SWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKI 357
S KK G + +L+ G PG+GKTT AH+ AK GY +E NASD RS IE +
Sbjct: 444 SGFKKPGKDGMGIYRAVLISGSPGIGKTTSAHLVAKREGYSPLEFNASDARSKKLIEAML 503
Query: 358 LDVVQMNSVMADSRPK--------------CLVIDEIDGALGDGKGAVEVILKMVSAERK 403
D + S+ + P+ L++DE+DG G +G + I ++
Sbjct: 504 EDTINNKSLDSWYNPRGGTGSHVARMHERTVLIMDEVDGMSGGDRGGIGAINALI----- 558
Query: 404 SNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPS 463
KK + P+ICICND +R F +P
Sbjct: 559 -----------------------KKTKV--PIICICNDRRDQKMRPFEHTTFNLSFRKPD 593
Query: 464 VSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILN 516
++V SR+ I E +K + L E DIRS +N L K+ ++
Sbjct: 594 AAQVKSRMLSIAFREKLKIRGEVMAQLIEAARSDIRSLINMLSAWKLSKDTMD 646
>gi|355716180|gb|AES05528.1| replication factor C 1, 145kDa [Mustela putorius furo]
Length = 1154
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 139/373 (37%), Gaps = 107/373 (28%)
Query: 190 EKPVVHEQLWVDKYAPNSFTELLS---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLS 246
EK V LWVDKY P S ++ D+ ++L WL+ W RS SE+
Sbjct: 578 EKNKVEHLLWVDKYKPTSLKTIIGQQGDQSCANKLLRWLQNWH--------RSPSEDTKR 629
Query: 247 ALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRST 306
A + F K+ G+ +
Sbjct: 630 AAKF------------GKFAGKDDGSSF-------------------------------- 645
Query: 307 GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV 366
K LL GPPG+GKT A + + GY VE+NASD RS ++++ + + + S+
Sbjct: 646 -----KAALLSGPPGVGKTATAALVCQELGYSYVELNASDTRSKNSLKEIVAESLNNTSI 700
Query: 367 MA---------------DSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKEN 410
S L++DE+DG G + +G ++ ++ ++
Sbjct: 701 TGFYSTSQHGSGGPTHSISTKHALIMDEVDGMAGSEDRGGIQELIGLI------------ 748
Query: 411 VAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSR 470
+ KI P+IC+CND P +RSL F +P V ++
Sbjct: 749 -----KHTKI-------------PIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGA 790
Query: 471 LKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV-VGRKD 529
+ I E +K A+ + DIR L+ L + + L + +KD
Sbjct: 791 MMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRAKKD 850
Query: 530 MSRSAFDIWKEIF 542
+ FD+ +++F
Sbjct: 851 IRLGPFDVARKVF 863
>gi|448330039|ref|ZP_21519331.1| replication factor C large subunit [Natrinema versiforme JCM 10478]
gi|445612820|gb|ELY66538.1| replication factor C large subunit [Natrinema versiforme JCM 10478]
Length = 504
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 111/237 (46%), Gaps = 36/237 (15%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS 370
+K +++ G PG+GKT+ AH A G+ V+E+NASD R + IE + + ++
Sbjct: 37 RKSVIVHGSPGIGKTSAAHALAADMGWPVMELNASDSRGADVIEKVAGEAAKSGTLTGGE 96
Query: 371 RPKCLVI-DEIDGALGDGK-GAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKK 428
+ LVI DE D G+ G + ++V + +N
Sbjct: 97 AGRRLVILDEADNFHGNADYGGSREVTRVV---KDAN----------------------- 130
Query: 429 ASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALT 488
+P++ + N+ Y + +SLR + F S +V L+ IC E ++ AL
Sbjct: 131 ----QPIVLVANEFYDMS-KSLRNSCETIEFRDVSKRSIVPVLRDICRREGVEFEEDALE 185
Query: 489 TLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKR 545
+AE T D+RS +N LQ + ++ E L V D+ V G++D + FD E+ +++
Sbjct: 186 KIAESTSGDLRSAVNDLQAVAEETERLTVDDV---VTGQRDTTEGIFDFLDELIKEK 239
>gi|448322580|ref|ZP_21512050.1| replication factor C large subunit [Natronococcus amylolyticus DSM
10524]
gi|445601338|gb|ELY55327.1| replication factor C large subunit [Natronococcus amylolyticus DSM
10524]
Length = 497
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 106/229 (46%), Gaps = 36/229 (15%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS 370
+K +++ G PG+GKT+ AH A G+ V+E+NASD R + IE + + ++ A
Sbjct: 37 RKAVIVHGSPGVGKTSAAHALANDMGWPVMELNASDSRGADVIERVAGEAAKSGTLTAGG 96
Query: 371 RPKCLVI-DEIDGALGDGK-GAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKK 428
+ LVI DE D G+ G + ++V K
Sbjct: 97 SGRRLVILDEADNFHGNADYGGSREVTRVV----------------------------KD 128
Query: 429 ASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALT 488
AS +P++ I N+ Y + +SLR + F S +V L+ IC E ++ AL
Sbjct: 129 AS--QPMVLIANEFYDMS-QSLRNACETVEFRDVSKRSIVPVLRDICRREGVEFEEEALE 185
Query: 489 TLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
+A+ T D+RS +N LQ + ++ E L V D+ V G +D + FD
Sbjct: 186 QIADSTSGDLRSAVNDLQAIAEEAERLTVEDV---VTGERDTTEGIFDF 231
>gi|124485323|ref|YP_001029939.1| replication factor C large subunit [Methanocorpusculum labreanum Z]
gi|150415663|sp|A2SQR6.1|RFCL_METLZ RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|124362864|gb|ABN06672.1| replication factor C large subunit [Methanocorpusculum labreanum Z]
Length = 476
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 141/331 (42%), Gaps = 58/331 (17%)
Query: 299 WHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKIL 358
W K T P+ + LL G PG+GKT+ A A+ + V+E+NASD R+ + IE
Sbjct: 28 WAK----TWTPDSRPLLFTGKPGIGKTSAALALARDMDWEVLELNASDARTKTIIERVAG 83
Query: 359 DVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPE 418
+ S+ R K ++IDE+D G+ A+R A ++ KE +
Sbjct: 84 NSSTTTSLFGAGR-KLIIIDEVDNLEGN-------------ADRGGARAIADILKEAK-- 127
Query: 419 KISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNE 478
+P++ I ND Y + S+R++ F VS + R+K IC E
Sbjct: 128 --------------QPIVLIANDAYGVS-DSIRRLCDPVPFRAIGVSTLQKRMKEICRFE 172
Query: 479 SMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIW 538
+ AL+ +AE + D+R+ +N L K ++V DI + +KD + FD+
Sbjct: 173 DIACGEDALSAIAESSAGDMRTAVNMLFGSSTGKTSISVGDINT---AQKDERATIFDLV 229
Query: 539 KEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVM 598
+F + L+ +S E D D + I E+I + HDP
Sbjct: 230 GGVFAGAPDRELQ-------KLSFECD---------EKPDSVMQWIEESIPLM--HDPK- 270
Query: 599 LKTVKCLDCLGNSDLMHQYIMRTQQMPLYVY 629
+ ++ + +D+ MR Q L+ Y
Sbjct: 271 -RRIRAYGRISRADVYLGRTMRRQYFTLWRY 300
>gi|304314451|ref|YP_003849598.1| replication factor C, large subunit [Methanothermobacter
marburgensis str. Marburg]
gi|302587910|gb|ADL58285.1| replication factor C, large subunit [Methanothermobacter
marburgensis str. Marburg]
Length = 470
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 141/331 (42%), Gaps = 61/331 (18%)
Query: 306 TGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNS 365
G P Q LLL GPPG GKTT+AH+ + +E+NASD RS I + S
Sbjct: 34 AGEP-QPPLLLVGPPGTGKTTMAHIIGREFS-DTLELNASDKRSQDAIMRTAGEASATRS 91
Query: 366 VMADSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKK 424
+ + K +++DE+DG G + +G V+ I +++ R
Sbjct: 92 LF-NHDLKLIILDEVDGIHGNEDRGGVQAINRILRESR---------------------- 128
Query: 425 GCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSS 484
P++ ND Y+ L+S++ KV + S + + LK IC E +
Sbjct: 129 --------HPIVLTANDPYSKRLQSIKPKCKVINIRKVHTSSIAAALKRICRAEGIDCPD 180
Query: 485 IALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVV--GRKDMSRSAFDIWKEIF 542
L LA+ + D+RS +N L+ + +E +G +++ G KD + + FD + +
Sbjct: 181 DVLKELAKRSHGDLRSAINDLEAVASGEE-----RVGEELLSMGEKDSTSNLFDAVRAVL 235
Query: 543 QKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTV 602
+ R ++R ++ D ++ + I EN+ + +Y P +
Sbjct: 236 KSRDFSKIREAMRVDD-----------------DPTLVLEFIAENVPR-EYEKPHEIS-- 275
Query: 603 KCLDCLGNSDLMHQYIMRTQQMPLYVYQPPL 633
+ D L ++D+ +R++ + Y L
Sbjct: 276 RAYDMLSHADIFFGRAVRSRNYTYWRYASDL 306
>gi|54887426|gb|AAH85173.1| Rfc1 protein [Mus musculus]
Length = 1132
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 141/360 (39%), Gaps = 103/360 (28%)
Query: 198 LWVDKYAPNSFTELLS---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTI 254
LWVDKY P S ++ D+ ++L WL+ W +S+ EE A +
Sbjct: 569 LWVDKYKPASLKNIIGQQGDQSCANKLLRWLRNWH--------KSSPEEKKHAAKFGKLA 620
Query: 255 SQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVL 314
S K + SSF K
Sbjct: 621 S---KDDGSSF----------------------------------------------KAA 631
Query: 315 LLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV----MADS 370
LL GPPG+GKTT A + + GY VE+NASD RS ++++ + + + S+ + +
Sbjct: 632 LLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKNSLKAVVAESLNNTSIKGFYTSGA 691
Query: 371 RPK-----CLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKK 424
P L++DE+DG G + +G ++ ++ ++ + KI
Sbjct: 692 APSVSARHALIMDEVDGMAGNEDRGGIQELIGLI-----------------KHTKI---- 730
Query: 425 GCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSS 484
P+IC+CND P +RSL F +P V ++ S + I E +K
Sbjct: 731 ---------PIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKSAMLSIAFKEGLKIPP 781
Query: 485 IALTTLAEYTECDIRSCLNTLQFLDKKKEILNV--MDIGSQVVGRKDMSRSAFDIWKEIF 542
A+ + D+R L+ L + + L SQ +KD+ FD+ +++F
Sbjct: 782 PAMNEIILGANQDVRQVLHNLSMWCAQSKALTYDQAKADSQRA-KKDIRLGPFDVTRKVF 840
>gi|260951239|ref|XP_002619916.1| hypothetical protein CLUG_01075 [Clavispora lusitaniae ATCC 42720]
gi|238847488|gb|EEQ36952.1| hypothetical protein CLUG_01075 [Clavispora lusitaniae ATCC 42720]
Length = 876
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 98/217 (45%), Gaps = 42/217 (19%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA--- 368
+ L+ GPPG+GKT+ AH+ A+ G+ ++E NASD RS S + + I V+ SV+
Sbjct: 345 RAALISGPPGIGKTSAAHLVAQELGFDILEKNASDVRSKSLLNSNIKSVLNNTSVVGFFK 404
Query: 369 ---------DSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEK 419
+ R CL++DE+DG M S + S A
Sbjct: 405 HQGEKEHQTNERRFCLIMDEVDG--------------MSSGDHGSAGALSAF-------- 442
Query: 420 ISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNES 479
C+ ++ P+I ICND P +R+ ++ F +PS + SRL I E
Sbjct: 443 ------CRITNM--PMILICNDKSLPKMRTFDRVTLDLPFRRPSEMEMKSRLLTIAFREK 494
Query: 480 MKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILN 516
+K + L + T DIR +N + + K ++ +N
Sbjct: 495 LKLDPTVIGQLVQATGNDIRQIINLMSTVSKTQKNIN 531
>gi|1703056|sp|P35601.2|RFC1_MOUSE RecName: Full=Replication factor C subunit 1; AltName:
Full=A1-P145; AltName: Full=Activator 1 140 kDa subunit;
Short=A1 140 kDa subunit; AltName: Full=Activator 1
large subunit; AltName: Full=Activator 1 subunit 1;
AltName: Full=Differentiation-specific element-binding
protein; AltName: Full=ISRE-binding protein; AltName:
Full=Replication factor C 140 kDa subunit; Short=RF-C
140 kDa subunit; Short=RFC140; AltName: Full=Replication
factor C large subunit
gi|457742|emb|CAA51260.1| replication factor C [Mus musculus]
Length = 1131
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 141/360 (39%), Gaps = 103/360 (28%)
Query: 198 LWVDKYAPNSFTELLS---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTI 254
LWVDKY P S ++ D+ ++L WL+ W +S+ EE A +
Sbjct: 569 LWVDKYKPASLKNIIGQQGDQSCANKLLRWLRNWH--------KSSPEEKKHAAKFGKLA 620
Query: 255 SQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVL 314
S K + SSF K
Sbjct: 621 S---KDDGSSF----------------------------------------------KAA 631
Query: 315 LLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV----MADS 370
LL GPPG+GKTT A + + GY VE+NASD RS ++++ + + + S+ + +
Sbjct: 632 LLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKNSLKAVVAESLNNTSIKGFYTSGA 691
Query: 371 RPK-----CLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKK 424
P L++DE+DG G + +G ++ ++ ++ + KI
Sbjct: 692 APSVSARHALIMDEVDGMAGNEDRGGIQELIGLI-----------------KHTKI---- 730
Query: 425 GCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSS 484
P+IC+CND P +RSL F +P V ++ S + I E +K
Sbjct: 731 ---------PIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKSAMLSIAFKEGLKIPP 781
Query: 485 IALTTLAEYTECDIRSCLNTLQFLDKKKEILNV--MDIGSQVVGRKDMSRSAFDIWKEIF 542
A+ + D+R L+ L + + L SQ +KD+ FD+ +++F
Sbjct: 782 PAMNEIILGANQDVRQVLHNLSMWCAQSKALTYDQAKADSQRA-KKDIRLGPFDVTRKVF 840
>gi|188219597|ref|NP_035388.2| replication factor C subunit 1 [Mus musculus]
gi|148705787|gb|EDL37734.1| replication factor C 1, isoform CRA_c [Mus musculus]
Length = 1131
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 141/360 (39%), Gaps = 103/360 (28%)
Query: 198 LWVDKYAPNSFTELLS---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTI 254
LWVDKY P S ++ D+ ++L WL+ W +S+ EE A +
Sbjct: 569 LWVDKYKPASLKNIIGQQGDQSCANKLLRWLRNWH--------KSSPEEKKHAAKFGKLA 620
Query: 255 SQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVL 314
S K + SSF K
Sbjct: 621 S---KDDGSSF----------------------------------------------KAA 631
Query: 315 LLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV----MADS 370
LL GPPG+GKTT A + + GY VE+NASD RS ++++ + + + S+ + +
Sbjct: 632 LLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKNSLKAVVAESLNNTSIKGFYTSGA 691
Query: 371 RPK-----CLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKK 424
P L++DE+DG G + +G ++ ++ ++ + KI
Sbjct: 692 APSVSARHALIMDEVDGMAGNEDRGGIQELIGLI-----------------KHTKI---- 730
Query: 425 GCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSS 484
P+IC+CND P +RSL F +P V ++ S + I E +K
Sbjct: 731 ---------PIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKSAMLSIAFKEGLKIPP 781
Query: 485 IALTTLAEYTECDIRSCLNTLQFLDKKKEILNV--MDIGSQVVGRKDMSRSAFDIWKEIF 542
A+ + D+R L+ L + + L SQ +KD+ FD+ +++F
Sbjct: 782 PAMNEIILGANQDVRQVLHNLSMWCAQSKALTYDQAKADSQRA-KKDIRLGPFDVTRKVF 840
>gi|405112|gb|AAA21643.1| activator 1 large subunit [Mus musculus]
Length = 1131
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 141/360 (39%), Gaps = 103/360 (28%)
Query: 198 LWVDKYAPNSFTELLS---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTI 254
LWVDKY P S ++ D+ ++L WL+ W +S+ EE A +
Sbjct: 569 LWVDKYKPASLKNIIGQQGDQSCANKLLRWLRNWH--------KSSPEEKKHAAKFGKLA 620
Query: 255 SQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVL 314
S K + SSF K
Sbjct: 621 S---KDDGSSF----------------------------------------------KAA 631
Query: 315 LLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV----MADS 370
LL GPPG+GKTT A + + GY VE+NASD RS ++++ + + + S+ + +
Sbjct: 632 LLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKNSLKAVVAESLNNTSIKGFYTSGA 691
Query: 371 RPK-----CLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKK 424
P L++DE+DG G + +G ++ ++ ++ + KI
Sbjct: 692 APSVSARHALIMDEVDGMAGNEDRGGIQELIGLI-----------------KHTKI---- 730
Query: 425 GCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSS 484
P+IC+CND P +RSL F +P V ++ S + I E +K
Sbjct: 731 ---------PIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKSAMLSIAFKEGLKIPP 781
Query: 485 IALTTLAEYTECDIRSCLNTLQFLDKKKEILNV--MDIGSQVVGRKDMSRSAFDIWKEIF 542
A+ + D+R L+ L + + L SQ +KD+ FD+ +++F
Sbjct: 782 PAMNEIILGANQDVRQVLHNLSMWCAQSKALTYDQAKADSQRA-KKDIRLGPFDVTRKVF 840
>gi|242219445|ref|XP_002475502.1| predicted protein [Postia placenta Mad-698-R]
gi|220725317|gb|EED79310.1| predicted protein [Postia placenta Mad-698-R]
Length = 1849
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 80/157 (50%), Gaps = 14/157 (8%)
Query: 335 CGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVI 394
CG + D+ I+ ++ ++ S + +RP VIDEIDGA G + I
Sbjct: 1689 CGSPACRIQCLRDQRE-VIDERLRPALETGSAIGSARPILAVIDEIDGATGGTDSSAGFI 1747
Query: 395 LKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKAS-LLRPVICICNDLYAPALRSLRQI 453
K++ D+P+K +K K + LLRP+ICICNDLYA +L LR
Sbjct: 1748 QKLIQL------------TYDRPKKKGRKADPKASRPLLRPIICICNDLYAGSLAKLRAH 1795
Query: 454 AKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTL 490
A++ F +P+ +V RL+ IC ES++ S ALT L
Sbjct: 1796 ARIVRFSRPNDVLLVRRLRDICERESLRADSRALTAL 1832
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 14/101 (13%)
Query: 135 SSSGVEERVKKLDVRAHSNSLTSEPIDVLLQKVEQEAFNKALNSSSEGQSDRSLPEKPV- 193
SSSG + K LDV P+ LL ++ + + S ++ + P +PV
Sbjct: 1554 SSSGGSQYSKLLDV----------PMHRLLDQLSTDTARQL--SRADAEHATPGPSRPVP 1601
Query: 194 -VHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVF 233
LWVD+Y P FT+LL D++ +REV+ W+K+WD CVF
Sbjct: 1602 SGDASLWVDRYRPRRFTDLLGDDRVHREVMAWVKEWDYCVF 1642
>gi|313760612|ref|NP_001186496.1| replication factor C (activator 1) 1, 145kDa [Xenopus (Silurana)
tropicalis]
Length = 1144
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/358 (21%), Positives = 137/358 (38%), Gaps = 99/358 (27%)
Query: 198 LWVDKYAPNSFTELLS---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTI 254
LWVDKY P S +++ ++ +++ WL +W + HS+
Sbjct: 571 LWVDKYKPTSIKQIIGQQGEQSCANKLMKWLNRWH-------------------QNHSSD 611
Query: 255 SQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVL 314
+ + F K+ G+ + K
Sbjct: 612 EKKPAAKLNKFGGKDDGSSF-------------------------------------KAA 634
Query: 315 LLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKC 374
LL GPPG+GKTT A + + GY VE+NASD RS ++++ + + + S+ C
Sbjct: 635 LLSGPPGVGKTTTAVLVCEELGYSYVELNASDTRSKNSMKEVVAESLNNTSIKGFYSGTC 694
Query: 375 --------LVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKG 425
L++DE+DG G + +G ++ ++ ++ + KI
Sbjct: 695 KSVSSKHALIMDEVDGMAGNEDRGGMQELITLI-----------------KQSKI----- 732
Query: 426 CKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSI 485
P+IC+CND +RSL F +P V ++ + + E +K
Sbjct: 733 --------PIICMCNDRNHSKIRSLANYCFDLRFQRPRVEQIKGAMMSVAFKEGLKIPPP 784
Query: 486 ALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVV-GRKDMSRSAFDIWKEIF 542
A+ + DIR L+ L + + L + S +KD+ FD+ +++F
Sbjct: 785 AMNEIILGANQDIRQVLHNLSMWCARSKALTYDEAKSSATNAKKDIKMGPFDVVRKVF 842
>gi|261403496|ref|YP_003247720.1| replication factor C large subunit [Methanocaldococcus vulcanius
M7]
gi|261370489|gb|ACX73238.1| AAA ATPase central domain protein [Methanocaldococcus vulcanius M7]
Length = 509
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 91/199 (45%), Gaps = 35/199 (17%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSR 371
K +LL GPPG GKTTLA+ A G+ V+E+NASD R+SS I+ + +S+ +
Sbjct: 40 KPILLVGPPGCGKTTLAYALANDYGFEVIELNASDKRNSSAIKKVVGHAATSSSIFG--K 97
Query: 372 PKCLVIDEIDGALG--DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKA 429
+V+DE+DG G D G E+I K KKA
Sbjct: 98 KFLIVLDEVDGISGKEDAGGVSELI-----------------------------KIIKKA 128
Query: 430 SLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTT 489
P+I ND YA ++RSL ++ + + LK I E + L
Sbjct: 129 K--NPIILTANDAYATSIRSLLPYVEIIQLNPVHTNSIYKVLKKIAQKEGLDVDDKTLKM 186
Query: 490 LAEYTECDIRSCLNTLQFL 508
+A+++ D+RS +N L+ L
Sbjct: 187 IAQHSAGDLRSAINDLEAL 205
>gi|1399917|gb|AAC60361.1| replication factor C large subunit [Anas platyrhynchos]
Length = 1145
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 98/427 (22%), Positives = 169/427 (39%), Gaps = 103/427 (24%)
Query: 299 WHKKTRSTGPPE------------QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASD 346
WHK T G + K LL GPPG+GKTT A + K GY VE+NASD
Sbjct: 614 WHKNTSEDGQAKASKLGGKDDGISSKAALLSGPPGVGKTTTAALVCKELGYSYVELNASD 673
Query: 347 DRSSSTIENKILDVVQMNSVM--------ADSRPKCLVIDEIDGALG-DGKGAVEVILKM 397
RS ++++ + + + S+ + S L++DE+DG G + +G ++ ++ +
Sbjct: 674 TRSKNSLKEVVAESLNNTSIKDFCSGTSSSVSGKHVLIMDEVDGMAGNEDRGGIQELISL 733
Query: 398 VSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVH 457
+ + KI P+IC+CND P +RSL
Sbjct: 734 I-----------------KHTKI-------------PIICMCNDRNHPKIRSLVHYCFDL 763
Query: 458 VFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNV 517
F +P + ++ + I E +K A+ + DIR L+ L K + L
Sbjct: 764 RFQRPRLEQIKGAMMSIAFKEGLKIPPPAMHEIILAANQDIRQVLHNLNMWCAKDKSLTY 823
Query: 518 MDIGSQVV-GRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGD 576
+ + +KD+ FD+ +++F + R S+ S++ F H D
Sbjct: 824 DEAKTDASRAKKDIKLGPFDVVRKVFAAGEEAS-RMSLIDKSDL-----FFH-------D 870
Query: 577 YDVIFDGIHENILQ---------LQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLY 627
Y + + EN + L+ H +ML + + D + + DL+ + I Q L
Sbjct: 871 YSLAPLFVQENYVHVKTAAAGGDLKKH--LMLLS-RAADSICDGDLVDRQIRSKQNWNLL 927
Query: 628 VYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSW---------HSKIPP 678
P AI L ++ + +M + +F SW H +I
Sbjct: 928 ---PTQAIYSSVLPGELMR--------------GYMSQFPVFPSWLGKFSSTGKHERIVQ 970
Query: 679 YISRHLS 685
++ H+S
Sbjct: 971 ELAMHMS 977
>gi|328790808|ref|XP_397246.4| PREDICTED: replication factor C subunit 1 [Apis mellifera]
Length = 1009
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 113/253 (44%), Gaps = 52/253 (20%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDV---VQMNSVMA 368
K LL GPPG+GKTT V G+ ++E NASD RS +E ++ ++ + +
Sbjct: 511 KAALLSGPPGIGKTTTVQVICNELGFDLIEFNASDTRSKKLLEEEVSELLSNTTLKNYFQ 570
Query: 369 DSRPK-----CLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISK 422
D++ K L++DE+DG G + +G ++ ++K++
Sbjct: 571 DNKSKPSSKHVLLMDEVDGMAGNEDRGGLQELIKLIK----------------------- 607
Query: 423 KKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKT 482
S P++CICND +R+L F +P + ++ + +K IC E++
Sbjct: 608 -------STDIPIVCICNDRNHSKMRTLANYTFDLRFSKPRLEQIRAAMKSICFKENINI 660
Query: 483 SSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVG-----RKDMSRSAFDI 537
++ L L E T DIR +N L V IGSQ KD+ ++D+
Sbjct: 661 TNEDLDLLIESTNQDIRQIINHLALF--------VGQIGSQEKSGKKHINKDLKLGSWDV 712
Query: 538 WKEIFQKRKTKRL 550
K++F + K +
Sbjct: 713 VKQVFSAEEQKHM 725
>gi|392569013|gb|EIW62187.1| DNA replication factor C large subunit [Trametes versicolor
FP-101664 SS1]
Length = 1006
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 42/206 (20%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIEN--KILDVV-------- 361
+ +++ GPPG+GKTT AH+ AK G+ +E+NASD RS +EN I++
Sbjct: 481 RAVMVTGPPGIGKTTSAHLCAKLAGFTPIELNASDARSKKLVENSTNIMNASLDGWMHGG 540
Query: 362 -QMNSV-MADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEK 419
N+V M + CL++DE+DG +G V + ++
Sbjct: 541 HATNAVGMTITDKSCLIMDEVDGMSAGDRGGVGALCALI--------------------- 579
Query: 420 ISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNES 479
KK + P+ICI ND A L+ L + + +P + + SR+ I E
Sbjct: 580 -------KKTKI--PIICIANDRGAQKLKPLTNVTFNLSYRRPEATAIRSRILSIAFKEK 630
Query: 480 MKTSSIALTTLAEYTECDIRSCLNTL 505
+K + + L + + DIR LN L
Sbjct: 631 LKIPANVIDQLVQGAQSDIRQVLNML 656
>gi|448534442|ref|ZP_21621737.1| replication factor C large subunit [Halorubrum hochstenium ATCC
700873]
gi|445704627|gb|ELZ56538.1| replication factor C large subunit [Halorubrum hochstenium ATCC
700873]
Length = 504
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 138/332 (41%), Gaps = 68/332 (20%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-- 368
+ ++L G PG+GKT+ AH A G+ VE+NASD R++ IE + N+ +
Sbjct: 37 HEAVVLHGSPGVGKTSAAHALANDMGWETVELNASDQRTADVIE-RFAGRAARNATLGGS 95
Query: 369 ---------DSRPKCLVI-DEIDGALGD-GKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
D+ + LVI DE D G+ +G I K+V
Sbjct: 96 AAGGGAAGGDTASRQLVILDEADNIHGNYDRGGASAITKLV------------------- 136
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
K+ G +P++ I ND Y + R LR + F S +V L+ IC
Sbjct: 137 ----KESG-------QPIVLIANDYYDMS-RGLRNATQEIEFRDVSARSIVPVLRDICRK 184
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
E ++ S AL +AE D+R +N LQ + ++ + V D+ V G +D + F
Sbjct: 185 EGIEFESDALQQIAEGNRGDLRGAVNDLQAATQGRDSITVADV---VTGDRDKALGLFPF 241
Query: 538 WKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPV 597
+ ++ + ++ S+ V D L + I N N+L + ++P
Sbjct: 242 LDAVLKEESAE---EALQSAYAVDETPDDLAAWIEN-------------NVLDV--YEPT 283
Query: 598 MLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVY 629
+ V+ D L N+D+ + TQ + Y
Sbjct: 284 --EAVRAYDFLANADVWLGRVRATQNYSYWRY 313
>gi|401838223|gb|EJT41950.1| CTF18-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 297
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 81/125 (64%), Gaps = 7/125 (5%)
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA 368
P++++LLL GPPG+GKT++ HV AK G+ V E+NASD+R+ ++ KI +++ ++
Sbjct: 174 PQKRILLLHGPPGIGKTSVTHVIAKQSGFSVSEINASDERAGPMVKEKIHNLLFNHTF-- 231
Query: 369 DSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKK 428
D+ P CLV DE+DG++ G + V++ ++ + K+ T K + D+ KI K++G
Sbjct: 232 DTNPVCLVADEVDGSVES--GFIRVLVDIIQGDMKA-TNKLLFGQLDK--KIKKRRGKSS 286
Query: 429 ASLLR 433
A L+R
Sbjct: 287 ALLIR 291
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 12/81 (14%)
Query: 160 IDVLLQKVEQEAFNKALNSSSEGQSD---RSLPEKPVVHEQLWVDKYAPNSFTELLSDEQ 216
I+ LL K+E +SSE + + S + V +E LWV+K+ P F +L+ +E+
Sbjct: 83 INYLLDKIE---------ASSEDRHNVHKTSTAARKVSNETLWVEKWRPRKFLDLVGNEK 133
Query: 217 TNREVLLWLKQWDSCVFGSEI 237
TNR +L WL+QW VF ++
Sbjct: 134 TNRRMLSWLRQWTPAVFKEQL 154
>gi|146304797|ref|YP_001192113.1| replication factor C large subunit [Metallosphaera sedula DSM 5348]
gi|145703047|gb|ABP96189.1| replication factor C large subunit [Metallosphaera sedula DSM 5348]
Length = 443
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 104/441 (23%), Positives = 193/441 (43%), Gaps = 78/441 (17%)
Query: 297 DSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENK 356
DSW K G P ++L GPPG GKT+LA A +VE NASD R+ +++
Sbjct: 32 DSWLK-----GSPSSTAVMLYGPPGTGKTSLAIALANTYKLELVETNASDTRNLTSL-RA 85
Query: 357 ILDVVQMNSVMADSRPKCLVIDEIDGAL-GDGKGAVEVILKMVSAERKSNTAKENVAKED 415
I++ ++ + R K + +DE+DG GAV IL+++ NT
Sbjct: 86 IVERASISGSLFGIRGKLIFLDEVDGIQPKQDYGAVSAILEII-----KNTK-------- 132
Query: 416 QPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHIC 475
P++ ND + P LR LR K+ + + LK IC
Sbjct: 133 -----------------YPILMAANDPWNPNLRDLRNAVKMIEVKKLGKIAMRRLLKKIC 175
Query: 476 NNESMKTSSIALTTLAEYTECDIRSCLNTLQFL-DKKKEILNVMDIGSQVVGRKDMSRSA 534
+ E +K AL + E ++ D R +N LQ + + E+ + S++V RK+
Sbjct: 176 SGEKIKCEDNALDQIIEASDGDSRYAINFLQSIAEGYGEVTE--KLVSELVRRKERELDP 233
Query: 535 FDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYH 594
F+ + +F R + + +VS+S + +YD++ + ENI +QY
Sbjct: 234 FETVRSVFWARYGWQAKQAVSNS----------------QVEYDLLMRWLSENI-PIQYE 276
Query: 595 DPVMLKTV-KCLDCLGNSDL-MHQYIMRTQQMPLYVYQ---PPLAITVHRLVSQIQKPNL 649
ML + + D L + + + + + + M Y + P +A+ ++++K +
Sbjct: 277 ---MLNDIWRGYDALARASIFLTRAKLSSWDMLSYTFDLMGPGVAM------AEVEKKSP 327
Query: 650 EWPKSYQRYRNAFMEKMDIFKSWHSK-----IPPYISRHL-STESLVEDSISPLLHILSP 703
W +++Y+ + + ++KS ++ I I HL S+ + + + + P I++
Sbjct: 328 SWKAKWKKYQFPTLVQ-QLYKSKRTRDTRDQIIKKIGFHLHSSSTKIYNDVFPFFLIMTS 386
Query: 704 PTLRPVALHLLSAKEKNDLAQ 724
L +A +L + E+ + Q
Sbjct: 387 KDLDELAKNLDLSPEEIEFIQ 407
>gi|389744152|gb|EIM85335.1| DNA replication factor C large subunit [Stereum hirsutum FP-91666
SS1]
Length = 804
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 88/204 (43%), Gaps = 42/204 (20%)
Query: 314 LLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRS------SSTIENKILDVVQMNSVM 367
++L GPPG+GKTT AH+ AK G+ +E+NASD RS S+ I N LD M
Sbjct: 280 VMLSGPPGIGKTTSAHLVAKLAGFTPIELNASDTRSKKLVENSTNITNTSLDGWMGGGEM 339
Query: 368 ADSRP------KCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKIS 421
++ CL++DE+DG +G V + ++
Sbjct: 340 MNAAGIPITDKSCLIMDEVDGMSAGDRGGVGALAALI----------------------- 376
Query: 422 KKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMK 481
KK + P+ICI ND A ++ L + F +P + + SR+ I E MK
Sbjct: 377 -----KKTKI--PIICIANDRSAQKMKPLTNVTFDLKFRKPDAAAIRSRMLTIAFKEKMK 429
Query: 482 TSSIALTTLAEYTECDIRSCLNTL 505
+ + L DIR LN L
Sbjct: 430 IPANVIDQLVTGVNSDIRQVLNML 453
>gi|353236695|emb|CCA68684.1| related to replication factor C protein [Piriformospora indica DSM
11827]
Length = 937
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 94/210 (44%), Gaps = 46/210 (21%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIE-----------NKILDV 360
+ LL+ GPPG+GKTT AH+ AK G+ +E+NASD RS IE N LD
Sbjct: 413 RALLIYGPPGIGKTTTAHLCAKLEGFTPIELNASDARSKKLIEACRHPNATNINNTSLDG 472
Query: 361 ----VQMNSVMADSRPK-CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKED 415
Q+NS + + L++DE+DG +G V V LK +
Sbjct: 473 WMSHGQVNSAGIEITDRTVLIMDEVDGMSAGDRGGV-VALKAL----------------- 514
Query: 416 QPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHIC 475
KK + P+ICI ND A L+ L IA F +P+ +++ SR+ IC
Sbjct: 515 ----------IKKTQV--PIICIANDGQAQKLKPLMGIAASIHFTKPTAAQIKSRIASIC 562
Query: 476 NNESMKTSSIALTTLAEYTECDIRSCLNTL 505
E + + L + DIR LN L
Sbjct: 563 YKEKLNIPPNVIEQLIAGAQSDIRQVLNML 592
>gi|284161883|ref|YP_003400506.1| ATPase AAA [Archaeoglobus profundus DSM 5631]
gi|284011880|gb|ADB57833.1| AAA ATPase central domain protein [Archaeoglobus profundus DSM
5631]
Length = 499
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 118/255 (46%), Gaps = 42/255 (16%)
Query: 298 SWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKI 357
+W K+ + P QK LLL GPPG+GKT+LA A G+ VVE+NASD RS I +
Sbjct: 27 AWAKRWQEGIP--QKPLLLGGPPGVGKTSLALALANTFGWEVVELNASDQRSWQIIRRIV 84
Query: 358 LDVVQMNSVMAD--------SRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKE 409
+ ++ ++ R K +++DE+D + KE
Sbjct: 85 GEAAFSETISSEGEFLSSESGRLKLILLDEVDNI----------------------SKKE 122
Query: 410 NVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVS 469
+ E K+ K+K + P+I ND Y + + LR + + F + ++V
Sbjct: 123 DFGGESALIKLLKRKPRQ------PIILTANDPYKLS-KELRDLCEFVQFKRLRTDQIVK 175
Query: 470 RLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKD 529
L+ IC +E +K AL +A+ D+R+ +N LQ + + + + D+ VV ++
Sbjct: 176 VLERICASEGIKADRNALRLIAQNAGGDLRAAINDLQAIAEGRREIRAEDV---VVSKRM 232
Query: 530 MSRSAFDIWKEIFQK 544
F + ++IF++
Sbjct: 233 QETDVFKVMQKIFKR 247
>gi|432331675|ref|YP_007249818.1| DNA polymerase III, gamma/tau subunit [Methanoregula formicicum
SMSP]
gi|432138384|gb|AGB03311.1| DNA polymerase III, gamma/tau subunit [Methanoregula formicicum
SMSP]
Length = 471
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 117/256 (45%), Gaps = 48/256 (18%)
Query: 298 SWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKI 357
+W +K+R LLL G PG+GKT+ A+ A + VVE+NASD R+++ IE +I
Sbjct: 31 TWTRKSRP--------LLLYGKPGIGKTSAAYALANDMNWEVVELNASDQRTAAVIE-RI 81
Query: 358 LDVVQMNSVMADSRPKCLVIDEIDGALGDG-KGAVEVILKMVSAERKSNTAKENVAKEDQ 416
+ + + + K +V+DE D G+ +G + IL+ + ++
Sbjct: 82 AGAGSVTASLTGATRKLIVLDEADNLQGNADRGGAKAILECIRQAQQ------------- 128
Query: 417 PEKISKKKGCKKASLLRPVICICNDLYA--PALRSLRQIAKVHVFIQPSVSRVVSRLKHI 474
P+I I NDLY P +R+ + V P+ S +V RL+++
Sbjct: 129 -----------------PMILIANDLYGISPEIRA--RCEPVQFKAVPARS-IVPRLRYL 168
Query: 475 CNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSA 534
C+ E + S AL ++AE DIRS +N L ++ L D G +KD S
Sbjct: 169 CSAEKISCSDAALQSIAESAGGDIRSAVNMLYASALGRDSL---DDGQVHTSQKDERVSI 225
Query: 535 FDIWKEIFQKRKTKRL 550
F + +F K + L
Sbjct: 226 FSLITALFGKTRDDEL 241
>gi|238567070|ref|XP_002386166.1| hypothetical protein MPER_15704 [Moniliophthora perniciosa FA553]
gi|215437317|gb|EEB87096.1| hypothetical protein MPER_15704 [Moniliophthora perniciosa FA553]
Length = 101
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 60/100 (60%)
Query: 320 PGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVIDE 379
PGLGKTTLAHV AK GY V+E+NASD RS ++++I ++ + S+P LVIDE
Sbjct: 2 PGLGKTTLAHVVAKQAGYEVMEINASDSRSGQIVDDRIRPALESGHAVRSSKPLLLVIDE 61
Query: 380 IDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEK 419
IDGA G G A + VS+ T +EN + PE+
Sbjct: 62 IDGATGAGDNASRKLRSQVSSADSRQTKEENSVWKKGPER 101
>gi|169236316|ref|YP_001689516.1| replication factor C large subunit [Halobacterium salinarum R1]
gi|42559531|sp|Q9HPI4.2|RFCL_HALSA RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|226739138|sp|B0R601.1|RFCL_HALS3 RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|167727382|emb|CAP14170.1| replication factor C large subunit [Halobacterium salinarum R1]
Length = 471
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 122/270 (45%), Gaps = 39/270 (14%)
Query: 306 TGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNS 365
T P ++ +++ G PG+GKT+ AH A G+ VVE+NASD R++ +E + + +
Sbjct: 32 TWPDHREAVVVHGSPGIGKTSAAHALANDAGWDVVELNASDQRTADVVERVAGEAARSGT 91
Query: 366 VMADSRPKCLV-IDEIDGALGD-GKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKK 423
+ S + LV +DE D G+ +G I ++V +D P+
Sbjct: 92 LTGGSGGRKLVLLDEADNLHGNIDRGGSAAITRLV---------------DDAPQ----- 131
Query: 424 KGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTS 483
P++ + N+ Y + SLR + F S +V L+ +C E +
Sbjct: 132 ----------PIVLVANEYYEMS-SSLRSACREIEFRDVSKRSIVPVLRDVCRREDVTYE 180
Query: 484 SIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQ 543
AL +AE D+RS +N LQ L ++ L D+ V+G +D + FD ++
Sbjct: 181 EDALAAIAEQNAGDLRSAVNDLQALAEQDRTLTADDV---VMGERDRTEGVFDYLDDVI- 236
Query: 544 KRKTKRLRNSVSSSSNVSNEFDFLHSLISN 573
T R ++ ++ +V D L S +++
Sbjct: 237 --ATHSAREALQAAYDVDETPDDLLSWVAD 264
>gi|156359338|ref|XP_001624727.1| predicted protein [Nematostella vectensis]
gi|156211524|gb|EDO32627.1| predicted protein [Nematostella vectensis]
Length = 793
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 112/474 (23%), Positives = 192/474 (40%), Gaps = 87/474 (18%)
Query: 299 WHKKTRSTGPPEQ-----------KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDD 347
WHK T P K LL GPPG+GKTT A + + GY VE+NASD
Sbjct: 257 WHKNRTKTLPKSSFFNKDTDGASLKAALLSGPPGVGKTTTATLVCQELGYSYVEMNASDA 316
Query: 348 RSSSTIE--------NKILDVVQMNSVMADSRPK-CLVIDEIDGALG-DGKGAVEVILKM 397
RS T+E NK +D +++ A S K L++DE+DG G + +G ++ ++ +
Sbjct: 317 RSKKTLEQVVSESLSNKSMDAFVGSNLAAKSGLKHVLLMDEVDGMAGSEDRGGMQELISL 376
Query: 398 VSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVH 457
+ K SK P+IC+CND + +RSL
Sbjct: 377 I--------------------KTSK----------IPIICMCNDRNSQKIRSLANYCFDL 406
Query: 458 VFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNV 517
F +P V ++ + I E +K A+ + + DIR L+ + + L
Sbjct: 407 RFSRPRVEQIKGAMMSIAYKEGIKIPPPAMDQIIQGANQDIRQVLHNMSMWTATNKTL-T 465
Query: 518 MDIGSQVV--GRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRG 575
D Q +KD+ FD +++ L S SS ++ ++ D
Sbjct: 466 YDQAKQEASNAQKDIKLGPFDAIRKL--------LSGSDSSKLSLKDKSDLFFC------ 511
Query: 576 DYDVIFDGIHENILQLQYHDPV--MLKTV----KCLDCLGNSDLMHQYIMRTQQMPLYVY 629
DY ++ + EN L + + KT+ + D + + DL+ + I L
Sbjct: 512 DYSLMPLFVQENYLMVSPSQASGDLKKTLDLVSRTADSICDGDLVSRQIRSNSSWSLLPM 571
Query: 630 QPPL-AITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTES 688
Q L A+ +S +++P+ +N+ ++D +I + H+ +
Sbjct: 572 QAMLSAVIPSYFISGGMGQRIDFPQWLG--KNSKQGRLD-------RILQELQAHMRIST 622
Query: 689 LVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSD 742
+ S L +I P LR L+ ++ DL + V++++S Y T+ D
Sbjct: 623 SADKSSINLEYI---PHLRQALTTPLTDQDPPDLKERVASVISLLDAYNLTRED 673
>gi|449500927|ref|XP_002189560.2| PREDICTED: replication factor C subunit 1 [Taeniopygia guttata]
Length = 1132
Score = 87.0 bits (214), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 102/476 (21%), Positives = 184/476 (38%), Gaps = 106/476 (22%)
Query: 299 WHKKTRSTGPPEQ------------KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASD 346
WHK T G + K LL GPPG+GKTT A + K GY VE+NASD
Sbjct: 599 WHKNTLEDGQAKPSKTGSKDDGTGFKAALLSGPPGVGKTTTAALVCKELGYSYVELNASD 658
Query: 347 DRSSSTIENKILDVVQMNSVM--------ADSRPKCLVIDEIDGALG-DGKGAVEVILKM 397
RS ++++ + + + S+ + S L++DE+DG G + +G ++ ++ +
Sbjct: 659 TRSKNSLKEVVAESLNNTSIKDFYSGASSSVSGKHVLIMDEVDGMAGNEDRGGIQELIGL 718
Query: 398 VSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVH 457
+ + P+IC+CND P +RSL
Sbjct: 719 IRHTK------------------------------VPIICMCNDRNHPKMRSLVHYCLDL 748
Query: 458 VFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNV 517
F +P + ++ + I E +K A+ + DIR L+ L K + L
Sbjct: 749 RFQRPRLEQIKGAMMSIAFKEGLKIPPPAMQEIILAANQDIRQVLHNLNMWCAKDKSLTY 808
Query: 518 MDIGSQVV-GRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGD 576
+ + +KD+ FD+ +++F + + R S+ S++ F H D
Sbjct: 809 DEAKTDASRAKKDIKLGPFDVVRKVFATGE-EAARMSLIDKSDL-----FFH-------D 855
Query: 577 YDVIFDGIHENILQ---------LQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLY 627
Y + + EN + L+ H ++ + D + + D++ + I Q L
Sbjct: 856 YSLAPLFVQENYVHVKPAAAGGNLKKH---LVLLSRAADSICDGDIVDRQIRSKQNWNLL 912
Query: 628 VYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSW---------HSKIPP 678
P AI L ++ + +M + +F SW H +I
Sbjct: 913 ---PTQAIYASVLPGELMR--------------GYMSQFPVFPSWLGKFSSTGKHDRIIQ 955
Query: 679 YISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSL 734
++ H+ SL + +++ LR + L + + Q ++ M SY L
Sbjct: 956 ELAMHM---SLRTQTCKRTVNMEYLSYLRDALVQPLKDFGADGVQQAITFMDSYCL 1008
>gi|146423370|ref|XP_001487614.1| hypothetical protein PGUG_00991 [Meyerozyma guilliermondii ATCC
6260]
Length = 708
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 102/233 (43%), Gaps = 47/233 (20%)
Query: 298 SWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKI 357
S K S G + L+ GPPG+GKT+ AH+ A + GY V+E NASD RS S + + +
Sbjct: 190 SGFKNPGSDGSGVFRACLISGPPGIGKTSAAHLVAHNLGYDVLEKNASDVRSKSLLNSNL 249
Query: 358 LDVVQMNSVMA-----------DSRPKCLVIDEIDG-ALGD--GKGAVEVILKMVSAERK 403
V+ SV+ + R C+++DE+DG + GD G GA+ ++ S
Sbjct: 250 KSVLSNTSVVGFFKHQHDQASVNDRRFCIIMDEVDGMSSGDHGGAGALSAFCRITSM--- 306
Query: 404 SNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPS 463
P+I ICND P +R+ ++ F +P+
Sbjct: 307 ------------------------------PLILICNDKLLPKMRTFDRVTLDLPFRRPT 336
Query: 464 VSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILN 516
+ V SRL I E +K + L + T DIR + L + + ++ +
Sbjct: 337 ENEVRSRLMTIALREKIKLDPTVIGQLVQATGNDIRQMITMLATVSRTQKTIG 389
>gi|350635478|gb|EHA23839.1| hypothetical protein ASPNIDRAFT_40100 [Aspergillus niger ATCC 1015]
Length = 926
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 137/578 (23%), Positives = 230/578 (39%), Gaps = 116/578 (20%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS 370
+KVLLLCGPPGLGKTTLAH VV+ D + ++ +++ + V
Sbjct: 274 RKVLLLCGPPGLGKTTLAH--------DVVKGRIRDSLGTENVKGMNVEIGE-ERVRKAG 324
Query: 371 RPKCLVIDEIDGALGDGKGA-----VEVILKMVSAERKSNTAKENVAKEDQPEKISKKKG 425
RP C+V+DE+DG + G ++ ++ +V ++K+++ K +KK
Sbjct: 325 RPVCVVVDEVDGVVSGSGGGGEGGFMKALIDLVLLDQKNSSGATEQTK-------GRKKK 377
Query: 426 CKKASLLRPVICICNDLYAPALRSLR--QIAKVHVFIQPSVSRVVSRLKHICNNESMKTS 483
LRP+I +CND+Y P+LR LR +A++ Q + VV+R+K I E + +
Sbjct: 378 GDNFRFLRPLIMVCNDVYHPSLRPLRAASVAEIIHVRQAPLENVVTRMKRIFTVEGIPSD 437
Query: 484 SIALTTLAEYT-----------------ECDIRSCLNTLQFLDKK--------------- 511
+ + L E + E DIRS L +++ K
Sbjct: 438 NDGVRRLCEASWGLARRKQGGVKSSGTAEGDIRSVLVAAEWVAHKLRNECPSTLRLTRSW 497
Query: 512 --KEILNVMDIGSQVVGRKDMSRSAF-DIWKEIFQKRK--------TKRLRNSVSSSSN- 559
+++L+ GS K ++R D+ + +F + R+ S+S +
Sbjct: 498 LEQKVLSANSSGSAFF--KGLNRGGVRDLIERVFTEGAGFTDAPVGVDSFRDPFSNSEDK 555
Query: 560 ---------VSNEFDFLHSLISNRGDYD-VIFDGIHENILQLQYHDPVMLKTVKCLDCLG 609
+ + L ++ G++D + + LQ D + K D L
Sbjct: 556 VPVGVADLRKRHAIERLREMVDASGEHDRAVAECFASYPLQSYQDDTFLSKPNAAYDWLH 615
Query: 610 NSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQ----KPNL-----EWPKSYQRYRN 660
D M + Q L Y + H L + Q P + E P S R
Sbjct: 616 FHDTMSSKVYTAQDWELSAYLSQSVVAFHHLFATAQGKAKAPEVNDEEEEHPFSGPRADF 675
Query: 661 AFMEKMD----IFKSWHSKIPPYISRHL-STESLVEDSISPLLHILSPPTLRPVALH--- 712
A E I + S +SR ST+SLV D I L+ +LS P ++PV +
Sbjct: 676 AAYEAQKQNRAILTEFQSAFSAPLSRLFRSTDSLVIDLIPNLVRMLS-PDVKPVVVRGSG 734
Query: 713 -------LLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPI 765
+ E+ + V M + ++ + + N G +H +PP+
Sbjct: 735 EQRSVASVRKESERTLIQAAVRVMAGLGVRFEKVR----IENAG---AHGGWAYRMEPPL 787
Query: 766 NEFITFKGYR-----SNHYVLALAVKQVLVHEVEKQRI 798
+ FITF + S + A++QVL E K+ I
Sbjct: 788 DTFITFSKTKSAPTASGSAPVRYAIRQVLDQEYRKENI 825
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEE 243
+W +KY FTEL+ DE+T+R VL WLK W+ VF + RS +++
Sbjct: 217 MWTEKYRARKFTELIGDERTHRSVLRWLKAWEPIVFPNIARSKAKK 262
>gi|256811408|ref|YP_003128777.1| replication factor C large subunit [Methanocaldococcus fervens
AG86]
gi|256794608|gb|ACV25277.1| AAA ATPase central domain protein [Methanocaldococcus fervens AG86]
Length = 488
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 146/349 (41%), Gaps = 64/349 (18%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSR 371
K +LL GPPG GKTTLA+ A G+ V+E+NASD R++S+I+ + +SV +
Sbjct: 40 KPILLVGPPGCGKTTLAYALANDYGFEVIELNASDKRNASSIKKVVGHAATSSSVFG--K 97
Query: 372 PKCLVIDEIDGALG--DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKA 429
+V+DE+DG G D G E+I K KKA
Sbjct: 98 KFLIVLDEVDGISGKEDAGGVSELI-----------------------------KVIKKA 128
Query: 430 SLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTT 489
P+I ND YA ++R+L +V + V LK I E + L
Sbjct: 129 K--NPIILTANDAYATSIRNLLPYVEVIQLNPVHTNSVYKVLKKIAEKEGLNVDDKILKM 186
Query: 490 LAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGR-KDMSRSA--FDIWKEIFQKRK 546
+A+++ D+RS +N L+ L D+ + V + D R A FD + I K
Sbjct: 187 IAQHSAGDLRSAINDLEALALSG------DLSYEAVQKLPDRKREANIFDALRIIL---K 237
Query: 547 TKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLD 606
T + ++ NV DV+ + I EN+ + +Y P + + +
Sbjct: 238 TTHYGIATTALMNVDE-------------TPDVVIEWIAENVPR-EYEKPE--EVARAFE 281
Query: 607 CLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSY 655
L +D +M+ Q + Y L +T +S+ +K P SY
Sbjct: 282 YLSKADRYLGRVMKRQNFGFWKYATTL-MTAGVALSKDEKYRKWTPYSY 329
>gi|409049495|gb|EKM58972.1| hypothetical protein PHACADRAFT_157248 [Phanerochaete carnosa
HHB-10118-sp]
Length = 677
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 90/206 (43%), Gaps = 42/206 (20%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKI-LDVVQMNSVMADS 370
+ +L+ GPPG+GKTT AH+ AK G+ +E+NASD RS +EN + ++ M +
Sbjct: 205 RAVLITGPPGIGKTTAAHLCAKLAGFTPIELNASDARSKRLVENSTNVSNTSLDGWMHGT 264
Query: 371 RP-----------KCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEK 419
CL++DE+DG +G V ++ ++ RK+
Sbjct: 265 EATNAAGVKITDKSCLIMDEVDGMSAGDRGGVVALVALI---RKTKI------------- 308
Query: 420 ISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNES 479
P+ICI ND A L+ L A F +P + + SRL I E
Sbjct: 309 --------------PIICIANDRGAQKLKPLIANAFNLPFRRPEAAAIRSRLLTIAFKEK 354
Query: 480 MKTSSIALTTLAEYTECDIRSCLNTL 505
MK + + L + DIR LN L
Sbjct: 355 MKVPANVIDQLVMGAQSDIRQVLNML 380
>gi|448324332|ref|ZP_21513763.1| replication factor C large subunit [Natronobacterium gregoryi SP2]
gi|445619015|gb|ELY72562.1| replication factor C large subunit [Natronobacterium gregoryi SP2]
Length = 493
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 101/227 (44%), Gaps = 38/227 (16%)
Query: 313 VLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRP 372
+++ G PG+GKT+ AH A G+ V+E+NASD R + IE + + ++
Sbjct: 39 AVIVHGSPGIGKTSAAHALANDMGWPVMELNASDSRGADVIERVAGEAAKSGTLTGGGAG 98
Query: 373 KCLVI-DEIDGALG--DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKA 429
+ LVI DE D G D G+ EV + A+
Sbjct: 99 RRLVILDEADNFHGNADYGGSREVTRVVKEAD---------------------------- 130
Query: 430 SLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTT 489
+PV+ + N+ Y + +SLR + F S +V L+ IC E ++ AL
Sbjct: 131 ---QPVVLVANEFYEMS-QSLRNACEAIEFRDVSKRSIVPVLRDICRREGIEFEEEALKQ 186
Query: 490 LAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFD 536
+AE T D+RS +N LQ + ++ E L V D V G +D + FD
Sbjct: 187 IAEETSGDLRSAVNDLQAVAEEAERLTVADA---VTGERDTTEGIFD 230
>gi|15790579|ref|NP_280403.1| replication factor C large subunit [Halobacterium sp. NRC-1]
gi|10581095|gb|AAG19883.1| replication factor C large subunit [Halobacterium sp. NRC-1]
Length = 501
Score = 86.7 bits (213), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 122/270 (45%), Gaps = 39/270 (14%)
Query: 306 TGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNS 365
T P ++ +++ G PG+GKT+ AH A G+ VVE+NASD R++ +E + + +
Sbjct: 62 TWPDHREAVVVHGSPGIGKTSAAHALANDAGWDVVELNASDQRTADVVERVAGEAARSGT 121
Query: 366 VMADSRPKCLV-IDEIDGALGD-GKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKK 423
+ S + LV +DE D G+ +G I ++V +D P+
Sbjct: 122 LTGGSGGRKLVLLDEADNLHGNIDRGGSAAITRLV---------------DDAPQ----- 161
Query: 424 KGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTS 483
P++ + N+ Y + SLR + F S +V L+ +C E +
Sbjct: 162 ----------PIVLVANEYYEMS-SSLRSACREIEFRDVSKRSIVPVLRDVCRREDVTYE 210
Query: 484 SIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQ 543
AL +AE D+RS +N LQ L ++ L D+ V+G +D + FD ++
Sbjct: 211 EDALAAIAEQNAGDLRSAVNDLQALAEQDRTLTADDV---VMGERDRTEGVFDYLDDVI- 266
Query: 544 KRKTKRLRNSVSSSSNVSNEFDFLHSLISN 573
T R ++ ++ +V D L S +++
Sbjct: 267 --ATHSAREALQAAYDVDETPDDLLSWVAD 294
>gi|430810977|emb|CCJ31500.1| unnamed protein product [Pneumocystis jirovecii]
Length = 659
Score = 86.7 bits (213), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 98/228 (42%), Gaps = 41/228 (17%)
Query: 303 TRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIE---NKILD 359
+ S G + +L+ GPPG+GKTT AH+ A GY V+E NASD RS +E NK+ +
Sbjct: 143 SESDGLGFYRAVLISGPPGIGKTTSAHLVASLEGYDVLEFNASDTRSRKLLEESLNKVYN 202
Query: 360 VVQMNSVM------ADSRPKCLVI--DEIDGALGDGKGAVEVILKMVSAERKSNTAKENV 411
+N A+ + VI DE+DG +G + E S K +
Sbjct: 203 NTSLNGFFLLDEQTAEKKKNKFVIIMDEVDGVSSGDQGGI--------GELNSFIKKTQI 254
Query: 412 AKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRL 471
P+ICICND + L L + F +P V+ + SR+
Sbjct: 255 ----------------------PIICICNDRASRKLLPLDRTTFDLKFRRPDVNSLRSRI 292
Query: 472 KHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMD 519
I E +K A+ LAE T DIR +N L + +N+ D
Sbjct: 293 MSIAYREGLKLEPQAIDQLAESTHGDIRQIINILSSWKLSQNSMNIDD 340
>gi|448431212|ref|ZP_21584983.1| replication factor C large subunit [Halorubrum tebenquichense DSM
14210]
gi|445688148|gb|ELZ40415.1| replication factor C large subunit [Halorubrum tebenquichense DSM
14210]
Length = 504
Score = 86.7 bits (213), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 138/332 (41%), Gaps = 68/332 (20%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-- 368
+ ++L G PG+GKT+ AH A G+ VE+NASD R++ IE + N+ +
Sbjct: 37 HEAVVLHGSPGVGKTSAAHALANDMGWETVELNASDQRTADVIE-RFAGRAARNATLGGS 95
Query: 369 ---------DSRPKCLVI-DEIDGALGD-GKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
D+ + LV+ DE D G+ +G I K+V
Sbjct: 96 AAGGGAAGGDTASRQLVVLDEADNIHGNYDRGGASAITKLV------------------- 136
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
K+ G +P++ I ND Y + R LR + F S +V L+ IC
Sbjct: 137 ----KESG-------QPIVLIANDYYDMS-RGLRNATQEIEFRDVSARSIVPVLRDICRK 184
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
E ++ S AL +AE D+R +N LQ + ++ + V D+ V G +D + F
Sbjct: 185 EGIEFESDALQQIAEGNRGDLRGAVNDLQAATQGRDSITVADV---VTGDRDKALGLFPF 241
Query: 538 WKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPV 597
+ ++ + ++ S+ V D L + I N N+L + ++P
Sbjct: 242 LDAVLKEESGE---EALQSAYAVDETPDDLAAWIEN-------------NVLDV--YEPT 283
Query: 598 MLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVY 629
+ V+ D L N+D+ + TQ + Y
Sbjct: 284 --EAVRAYDFLANADVWLGRVRATQNYSYWRY 313
>gi|190345075|gb|EDK36893.2| hypothetical protein PGUG_00991 [Meyerozyma guilliermondii ATCC
6260]
Length = 708
Score = 86.7 bits (213), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 102/233 (43%), Gaps = 47/233 (20%)
Query: 298 SWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKI 357
S K S G + L+ GPPG+GKT+ AH+ A + GY V+E NASD RS S + + +
Sbjct: 190 SGFKNPGSDGSGVFRACLISGPPGIGKTSAAHLVAHNLGYDVLEKNASDVRSKSLLNSNL 249
Query: 358 LDVVQMNSVMA-----------DSRPKCLVIDEIDG-ALGD--GKGAVEVILKMVSAERK 403
V+ SV+ + R C+++DE+DG + GD G GA+ ++ S
Sbjct: 250 KSVLSNTSVVGFFKHQHDQASVNDRRFCIIMDEVDGMSSGDHGGAGALSAFCRITSM--- 306
Query: 404 SNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPS 463
P+I ICND P +R+ ++ F +P+
Sbjct: 307 ------------------------------PLILICNDKSLPKMRTFDRVTLDLPFRRPT 336
Query: 464 VSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILN 516
+ V SRL I E +K + L + T DIR + L + + ++ +
Sbjct: 337 ENEVRSRLMTIALREKIKLDPTVIGQLVQATGNDIRQMITMLATVSRTQKTIG 389
>gi|289580410|ref|YP_003478876.1| ATPase AAA [Natrialba magadii ATCC 43099]
gi|448284079|ref|ZP_21475344.1| replication factor C large subunit [Natrialba magadii ATCC 43099]
gi|289529963|gb|ADD04314.1| AAA ATPase central domain protein [Natrialba magadii ATCC 43099]
gi|445572174|gb|ELY26716.1| replication factor C large subunit [Natrialba magadii ATCC 43099]
Length = 514
Score = 86.7 bits (213), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 106/240 (44%), Gaps = 38/240 (15%)
Query: 301 KKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDV 360
K+ T Q +++ G PG+GKT+ AH A G+ V+E+NASD R + IE +
Sbjct: 27 KEWAETWDDHQDAVIVHGSPGVGKTSAAHALANDLGWPVMELNASDSRGADVIERIAGEA 86
Query: 361 VQMNSVMADSRPKCLVI-DEIDGALG--DGKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
+ ++ + LVI DE D G D G+ EV + SA +
Sbjct: 87 AKSGTLTGGESGRRLVILDEADNFHGNADYGGSREVTRVVKSANQ--------------- 131
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
P++ + N+ Y + +SLR + F S +V L+ IC
Sbjct: 132 ----------------PIVLVANEFYDMS-QSLRNACETIEFRDVSKRSIVPVLRDICRR 174
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
E ++ AL +AE T D+RS +N LQ + ++ E L V D+ V G +D + FD
Sbjct: 175 EDIEFEDDALQKIAEDTSGDLRSAVNDLQAVAEEAERLTVDDV---VTGDRDTTEGIFDF 231
>gi|167520484|ref|XP_001744581.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776912|gb|EDQ90530.1| predicted protein [Monosiga brevicollis MX1]
Length = 554
Score = 86.7 bits (213), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 112/256 (43%), Gaps = 55/256 (21%)
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM- 367
P + +L+ GPPG+GKTT A V + CGY +E+NASD R+ + KI + N M
Sbjct: 157 PWFQAVLMVGPPGVGKTTTATVVCRECGYEPIELNASDVRNRGLLHEKI-GALTGNKTMT 215
Query: 368 --------ADSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPE 418
A + L+ DE+DG G + +G V I+K++ NT K
Sbjct: 216 QFYQQGQQAVVKKTALIFDEVDGMAGNEDRGGVGEIIKLI------NTTK---------- 259
Query: 419 KISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNE 478
P+ICI ND+ L +L+ F +P +VV + + + E
Sbjct: 260 --------------MPIICIANDI-PRKLMTLKGKCYNLRFSRPRAQQVVGAMMTVAHRE 304
Query: 479 SMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV--------VGRKDM 530
+K + I + + E + D+R LN + + D+ +Q K++
Sbjct: 305 GLKVNPIIVQQMVEAADGDMRQVLNNMYLFSRDDP-----DLVAQADKVKANAKAAHKNI 359
Query: 531 SRSAFDIWKEIFQKRK 546
+++ FD+ + F+ R+
Sbjct: 360 AQNTFDVIHKFFKGRE 375
>gi|430811893|emb|CCJ30648.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1026
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 98/228 (42%), Gaps = 41/228 (17%)
Query: 303 TRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIE---NKILD 359
+ S G + +L+ GPPG+GKTT AH+ A GY V+E NASD RS +E NK+ +
Sbjct: 313 SESDGLGFYRAVLISGPPGIGKTTSAHLVASLEGYDVLEFNASDTRSRKLLEESLNKVYN 372
Query: 360 VVQMNSVM------ADSRPKCLVI--DEIDGALGDGKGAVEVILKMVSAERKSNTAKENV 411
+N A+ + VI DE+DG +G + E S K +
Sbjct: 373 NTSLNGFFLLDEQTAEKKKNKFVIIMDEVDGVSSGDQGGI--------GELNSFIKKTQI 424
Query: 412 AKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRL 471
P+ICICND + L L + F +P V+ + SR+
Sbjct: 425 ----------------------PIICICNDRASRKLLPLDRTTFDLKFRRPDVNSLRSRI 462
Query: 472 KHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMD 519
I E +K A+ LAE T DIR +N L + +N+ D
Sbjct: 463 MSIAYREGLKLEPQAIDQLAESTHGDIRQIINILSSWKLSQNSMNIDD 510
>gi|281200951|gb|EFA75165.1| AAA ATPase domain-containing protein [Polysphondylium pallidum
PN500]
Length = 335
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 103/417 (24%), Positives = 171/417 (41%), Gaps = 82/417 (19%)
Query: 530 MSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENIL 589
M + F++WK IFQ + S + S + L S I + D + +G++EN
Sbjct: 1 MEKGLFELWKNIFQGQA------SSAKDKESSGNYSTLESEIVSCSQQDKLLEGVYENFN 54
Query: 590 QLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNL 649
+D KTV+CL+ SDL+H R+ +PL ++ +++ Q N
Sbjct: 55 LNMTNDYSFEKTVECLEWFTYSDLVHDERYRS-LIPLAIHSKCNSMSPKVSHPQSGYANF 113
Query: 650 EWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPV 709
K Q ++F++ +PP + L+ V D ISP L IL+ P +R V
Sbjct: 114 IKLKHSQSVIDSFLQS--------ELVPPMVYASLTKTIFVRDFISPFLDILAMP-IRSV 164
Query: 710 ALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFI 769
HL S KEK L LV M Y++ Y L N +SH + + +PPI+ I
Sbjct: 165 NPHLYSQKEKQSLNNLVEIMKHYNINY----------TLENNISHSLQYV-LNPPIDNLI 213
Query: 770 TFKGYRSNHYVLALAVKQVLVHEVEKQRIMQVTIGKSEHLADGYKENMDLAGEEDSKTES 829
F M T K HL++ K+ + +A +
Sbjct: 214 QF-------------------------NFMDKTPSKHLHLSNTQKQIISIAVIQK----- 243
Query: 830 AKTNNAAVSAKLIEKSKSLPYSRQCNPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRS 889
V+ K +++ +S P + T + + T PK +
Sbjct: 244 -------VNKKEVQEKESKPKEKA---------ETAPAFKVPTPPSTPKPQNIVE---HV 284
Query: 890 SSSFFDRFRKLSGKVSQDNDNAVQKATVERDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
FF R +LS + + N ++++TV + + +++ EGFTNAVK+ ++DFL
Sbjct: 285 PKDFFGRPIQLSPEST--NKKNIKESTVSK----IKYRYQEGFTNAVKKSAYIKDFL 335
>gi|448499266|ref|ZP_21611280.1| replication factor C large subunit [Halorubrum coriense DSM 10284]
gi|445697603|gb|ELZ49665.1| replication factor C large subunit [Halorubrum coriense DSM 10284]
Length = 500
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 139/332 (41%), Gaps = 68/332 (20%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-- 368
++ ++L G PG+GKT+ AH A G+ VE+NASD R++ IE + N+ +
Sbjct: 37 REAVVLHGSPGVGKTSAAHALANDMGWETVELNASDQRTADVIE-RFAGRAARNATLGGS 95
Query: 369 ---------DSRPKCLVI-DEIDGALGD-GKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
D+ + LV+ DE D G+ +G I K+V
Sbjct: 96 AAGGGAAGGDTASRQLVVLDEADNIHGNYDRGGASAITKLV------------------- 136
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
K+ G +P++ I ND Y + R LR + F S +V L+ +C
Sbjct: 137 ----KESG-------QPIVLIANDYYDMS-RGLRNATQEIEFRDVSARSIVPVLRDVCRK 184
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
E ++ S AL +AE D+R +N LQ + ++ + V D+ V G +D + F
Sbjct: 185 EGIEFESDALQRIAEGNRGDLRGAVNDLQAATQGRDSITVADV---VTGDRDKALGLFPF 241
Query: 538 WKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPV 597
+ ++ + ++ S+ V D L + I N N+L + ++P
Sbjct: 242 LDAVLKEESAE---EALQSAYAVDETPDDLTAWIEN-------------NVLDV--YEPA 283
Query: 598 MLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVY 629
+ V+ D L N+D+ + TQ + Y
Sbjct: 284 --EAVRAYDFLANADVWLGRVRATQNYSYWRY 313
>gi|448485438|ref|ZP_21606663.1| replication factor C large subunit [Halorubrum arcis JCM 13916]
gi|445818092|gb|EMA67959.1| replication factor C large subunit [Halorubrum arcis JCM 13916]
Length = 503
Score = 86.3 bits (212), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 138/332 (41%), Gaps = 68/332 (20%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-- 368
++ ++L G PG+GKT+ AH A G+ VE+NASD R++ IE + N+ +
Sbjct: 37 REAVVLHGSPGVGKTSAAHALANDMGWETVELNASDQRTADVIE-RFAGRAARNATLGGS 95
Query: 369 ---------DSRPKCLVI-DEIDGALGD-GKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
D+ + LVI DE D G+ +G I K+V
Sbjct: 96 AAGGGAAGGDTASRQLVILDEADNIHGNYDRGGASAITKLV------------------- 136
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
K+ G +P++ I ND Y + R LR + F S +V L+ +C
Sbjct: 137 ----KESG-------QPIVLIANDFYDMS-RGLRNATQEIEFRDVSARSIVPVLRDVCRK 184
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
E ++ S AL +AE D+R +N LQ + ++ + V D+ V G +D + F
Sbjct: 185 EGIEFESDALQRIAEGNRGDLRGAINDLQAATQGRDSITVEDV---VTGDRDKALGLFPF 241
Query: 538 WKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPV 597
+ ++ + ++ S+ V D L I N N+L + ++P
Sbjct: 242 LDAVLKEESAE---EALQSAYAVDETPDDLARWIEN-------------NLLDV--YEPA 283
Query: 598 MLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVY 629
+ V+ D L N+D+ + TQ + Y
Sbjct: 284 --EAVRAYDFLANADVWLGRVRATQNYSYWRY 313
>gi|410081562|ref|XP_003958360.1| hypothetical protein KAFR_0G01910 [Kazachstania africana CBS 2517]
gi|372464948|emb|CCF59225.1| hypothetical protein KAFR_0G01910 [Kazachstania africana CBS 2517]
Length = 861
Score = 86.3 bits (212), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 102/448 (22%), Positives = 167/448 (37%), Gaps = 122/448 (27%)
Query: 195 HEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTI 254
++LW KYAP + ++ ++ + ++ WL W+
Sbjct: 295 EDKLWTVKYAPTNLNQMCGNKSSILKLKNWLLNWN------------------------- 329
Query: 255 SQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVL 314
NKK S F KN G R +G FR++
Sbjct: 330 -MNKK---SGF--KNPG-RDGSGVFRSA-------------------------------- 350
Query: 315 LLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPK- 373
+L GPPG+GKTT AH+ AK GY ++E NASD RS S + + + + SV+ + K
Sbjct: 351 MLYGPPGIGKTTAAHLIAKELGYDILEQNASDVRSKSLLNAGVKNALDNMSVIGYFKHKD 410
Query: 374 ----------CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKK 423
+++DE+DG G +G V + +
Sbjct: 411 EIEESNGKNFVVIMDEVDGMSGGDRGGVGQLAQF-------------------------- 444
Query: 424 KGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTS 483
C+K S P+I ICN+ P +R + F +P + + SRL I E K
Sbjct: 445 --CRKTST--PMILICNERNLPKMRPFDRTCLDLQFRRPDANSIKSRLMTIAIREGFKLD 500
Query: 484 SIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVG--RKDMSRSAFDIWKEI 541
+ L + T DIR +N L + + +N +I Q+ +K+++ FDI ++
Sbjct: 501 PNVIDRLVQATRGDIRQIINLLSTISTTTKSINHENI-KQISDSWQKNIALKPFDITHKL 559
Query: 542 FQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENIL-----QLQYHDP 596
+ N V SN F + D D I EN + L +
Sbjct: 560 LD----GHIYNEVG-----SNTFTLNDKIALYFDDLDFTPLMIQENYINSKPGNLSPGET 610
Query: 597 VMLKTVKCLDCLGNSDLMHQYIMRTQQM 624
+ + D + DL+ + I +Q+
Sbjct: 611 HLQAVAEAADSISQGDLVERKIRSAEQL 638
>gi|344279142|ref|XP_003411350.1| PREDICTED: replication factor C subunit 1 [Loxodonta africana]
Length = 1149
Score = 86.3 bits (212), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 150/390 (38%), Gaps = 105/390 (26%)
Query: 168 EQEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELL---SDEQTNREVLLW 224
EQ A +NS + +D S K V LWVDKY P S ++ D+ ++L W
Sbjct: 558 EQVAEETNVNSGARNLADDSSGHK--VESLLWVDKYKPTSLKAIIGQQGDQSCANKLLRW 615
Query: 225 LKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNN 284
L+ W H + S++KK + F +
Sbjct: 616 LRNW----------------------HKSPSEDKKHA-AKFGK----------------- 635
Query: 285 LEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNA 344
S G D G + LL GPPG+GKTT A + + GY VE+NA
Sbjct: 636 -------SAGKDD---------GSSFKAALL-SGPPGVGKTTTASLVCQELGYSYVELNA 678
Query: 345 SDDRSSSTIE---------NKILDVVQMNSVMADSRPKCLVIDEIDGALG-DGKGAVEVI 394
SD RS ++++ I +V + S L++DE+DG G + +G ++ +
Sbjct: 679 SDTRSKNSLKEIVSESLNNTSIKGFYSSGAVHSPSAKHALIMDEVDGMAGNEDRGGIQEL 738
Query: 395 LKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIA 454
+ ++ + KI P+IC+CND P +RSL
Sbjct: 739 IGLI-----------------KHTKI-------------PIICMCNDRSHPKVRSLVHYC 768
Query: 455 KVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEI 514
F +P V ++ + + E +K A+ + DIR L+ L + +
Sbjct: 769 FDLRFQRPRVEQIKGAMMSVAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCAQSKA 828
Query: 515 LNV--MDIGSQVVGRKDMSRSAFDIWKEIF 542
L + S +KD+ FD+ +++F
Sbjct: 829 LTYDQAKVDSNRA-KKDIKLGPFDVARKVF 857
>gi|85001193|ref|XP_955315.1| replication factor c-related protein [Theileria annulata strain
Ankara]
gi|65303461|emb|CAI75839.1| replication factor c-related protein, putative [Theileria annulata]
Length = 961
Score = 86.3 bits (212), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 108/267 (40%), Gaps = 56/267 (20%)
Query: 299 WHKK-TRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIEN-- 355
W K ++ E K LL GPPG+GKTT A + + YHV+E NASD R+ ++IE
Sbjct: 501 WLKHFSKDKAKDEFKAALLSGPPGIGKTTCAKLVGQFYNYHVIEFNASDQRTKNSIERIS 560
Query: 356 -KILDVVQMNSVMADSRP-------------KCLVIDEIDGALGDGKGAVEVILKMVSAE 401
+ + +N+ S L++DE+DG KG ++ I ++
Sbjct: 561 PLVTGTLTLNTFGTPSSTDSNSVNHVDLNVKTLLILDEVDGMSTGDKGGLQAISDLIDIT 620
Query: 402 RKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQ 461
+ C P+I ICND + + +L F
Sbjct: 621 K-----------------------C-------PIILICNDRLSQKMSALSNKCLDLRFTS 650
Query: 462 PSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIG 521
P + + R+ IC E ++ + L L + D+R LN LQF + I N
Sbjct: 651 PPIDLYMKRMNEICKLEKIQVTENLLLELYHKSNGDLRYALNYLQFYNLNTNIAN----- 705
Query: 522 SQVVGRKDMS--RSAFDIWKEIFQKRK 546
+ +KD S ++ FD +IF K
Sbjct: 706 --SINKKDESHFQNLFDNCNKIFHLAK 730
>gi|448427732|ref|ZP_21584007.1| replication factor C large subunit [Halorubrum terrestre JCM 10247]
gi|445677626|gb|ELZ30125.1| replication factor C large subunit [Halorubrum terrestre JCM 10247]
Length = 506
Score = 86.3 bits (212), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 138/332 (41%), Gaps = 68/332 (20%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-- 368
++ ++L G PG+GKT+ AH A G+ VE+NASD R++ IE + N+ +
Sbjct: 37 REAVVLHGSPGVGKTSAAHALANDMGWETVELNASDQRTADVIE-RFAGRAARNATLGGS 95
Query: 369 ---------DSRPKCLVI-DEIDGALGD-GKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
D+ + LVI DE D G+ +G I K+V
Sbjct: 96 AAGGGAAGGDTASRQLVILDEADNIHGNYDRGGASAITKLV------------------- 136
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
K+ G +P++ I ND Y + R LR + F S +V L+ +C
Sbjct: 137 ----KESG-------QPIVLIANDFYDMS-RGLRNATQEIEFRDVSARSIVPVLRDVCRK 184
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
E ++ S AL +AE D+R +N LQ + ++ + V D+ V G +D + F
Sbjct: 185 EGIEFESDALQRIAEGNRGDLRGAINDLQAATQGRDSITVEDV---VTGDRDKALGLFPF 241
Query: 538 WKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPV 597
+ ++ + ++ S+ V D L I N N+L + ++P
Sbjct: 242 LDAVLKEESAE---EALQSAYAVDETPDDLARWIEN-------------NLLDV--YEPA 283
Query: 598 MLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVY 629
+ V+ D L N+D+ + TQ + Y
Sbjct: 284 --EAVRAYDFLANADVWLGRVRATQNYSYWRY 313
>gi|399576914|ref|ZP_10770669.1| replication factor C large subunit [Halogranum salarium B-1]
gi|399238358|gb|EJN59287.1| replication factor C large subunit [Halogranum salarium B-1]
Length = 492
Score = 86.3 bits (212), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 139/348 (39%), Gaps = 70/348 (20%)
Query: 296 QDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIEN 355
+D++ K R T +K ++L G PG+GKT+ AH A G+ VE+NASD R+ IE
Sbjct: 22 RDAFAKWGR-TWDDHRKAVILHGSPGIGKTSAAHALANDMGWETVELNASDKRTGDVIE- 79
Query: 356 KILDVVQMNSVMADSRPKC-------------LVIDEIDGALGD-GKGAVEVILKMVSAE 401
+ MN+ +A + K +V+DE D G+ +G I K+V
Sbjct: 80 RFAGRAAMNATLAGAAEKTGDEATDRQQNRQLVVLDEADNIHGNYDRGGASAITKLVK-- 137
Query: 402 RKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQ 461
Q E+ P++ I N+ Y + R LR+ + F
Sbjct: 138 --------------QSEQ--------------PIVLIANEFYDMS-RGLRKACQDIEFRD 168
Query: 462 PSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIG 521
S +V L+ IC E ++ S AL +AE D+R +N LQ + E + V +
Sbjct: 169 VSARSIVPVLRDICRREGVEYDSDALQRIAEENGGDLRGAVNDLQAAAEGNERVTVESV- 227
Query: 522 SQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIF 581
V G +D S F + K + R ++ SS V D L I G+ ++
Sbjct: 228 --VTGSRDQSMGIFAFLDAVL---KEQEPREALQSSYAVDETPDDLTKWI--EGNITKVY 280
Query: 582 DGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVY 629
+G + + + L N+D + TQ + Y
Sbjct: 281 EG---------------EELARAYEFLANADRWLGRVRATQNYSYWRY 313
>gi|307354393|ref|YP_003895444.1| AAA ATPase central domain-containing protein [Methanoplanus
petrolearius DSM 11571]
gi|307157626|gb|ADN37006.1| AAA ATPase central domain protein [Methanoplanus petrolearius DSM
11571]
Length = 477
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 106/244 (43%), Gaps = 49/244 (20%)
Query: 314 LLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPK 373
+L+ G PG+GKT+ + A + VVE+NASDDR+ S I+ S+ SR K
Sbjct: 50 VLIYGKPGIGKTSAVYALAADMNWEVVELNASDDRTKSVIDKIAGSTATTMSLTGASR-K 108
Query: 374 CLVIDEIDGALGDG-KGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLL 432
+V DE D G+ +G IL + K C+
Sbjct: 109 LIVFDEADNLHGNADRGGARAILDTI------------------------KNSCQ----- 139
Query: 433 RPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAE 492
P++ I ND+Y A + L+ + F +V RLK+IC++E +K AL +A+
Sbjct: 140 -PIVLIANDIYGVA-KELKSVCIQVQFRSLQARSIVPRLKYICSSEGIKCEENALLDIAD 197
Query: 493 YTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGR------KDMSRSAFDIWKEIFQKRK 546
+ D+RS +N +L+ G+ V R KD + FD+ F+ +
Sbjct: 198 ESSGDLRSAIN----------MLHAASAGADVSEREVATSSKDERSTIFDLVGAAFKGKD 247
Query: 547 TKRL 550
KRL
Sbjct: 248 DKRL 251
>gi|448504659|ref|ZP_21614000.1| replication factor C large subunit [Halorubrum distributum JCM
9100]
gi|448519106|ref|ZP_21617882.1| replication factor C large subunit [Halorubrum distributum JCM
10118]
gi|445701869|gb|ELZ53841.1| replication factor C large subunit [Halorubrum distributum JCM
9100]
gi|445704122|gb|ELZ56040.1| replication factor C large subunit [Halorubrum distributum JCM
10118]
Length = 503
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 138/332 (41%), Gaps = 68/332 (20%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-- 368
++ ++L G PG+GKT+ AH A G+ VE+NASD R++ IE + N+ +
Sbjct: 37 REAVVLHGSPGVGKTSAAHALANDMGWETVELNASDQRTADVIE-RFAGRAARNATLGGS 95
Query: 369 ---------DSRPKCLVI-DEIDGALGD-GKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
D+ + LVI DE D G+ +G I K+V
Sbjct: 96 AAGGGAAGGDTASRQLVILDEADNIHGNYDRGGASAITKLV------------------- 136
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
K+ G +P++ I ND Y + R LR + F S +V L+ +C
Sbjct: 137 ----KESG-------QPIVLIANDFYDMS-RGLRNATQEIEFRDVSARSIVPVLRDVCRK 184
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
E ++ S AL +AE D+R +N LQ + ++ + V D+ V G +D + F
Sbjct: 185 EGIEFESDALQRIAEGNRGDLRGAINDLQAATQGRDSITVEDV---VTGDRDKALGLFPF 241
Query: 538 WKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPV 597
+ ++ + ++ S+ V D L I N N+L + ++P
Sbjct: 242 LDAVLKEESAE---EALQSAYAVDETPDDLTRWIEN-------------NLLDV--YEPA 283
Query: 598 MLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVY 629
+ V+ D L N+D+ + TQ + Y
Sbjct: 284 --EAVRAYDFLANADVWLGRVRATQNYSYWRY 313
>gi|365986743|ref|XP_003670203.1| hypothetical protein NDAI_0E01440 [Naumovozyma dairenensis CBS 421]
gi|343768973|emb|CCD24960.1| hypothetical protein NDAI_0E01440 [Naumovozyma dairenensis CBS 421]
Length = 892
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 103/240 (42%), Gaps = 49/240 (20%)
Query: 315 LLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM------- 367
+L GPPG+GKTT AH+ AK GY V+E NASD RS S + + + + SV+
Sbjct: 376 MLYGPPGIGKTTAAHLVAKELGYDVLEQNASDVRSKSLLNAGVKNALGNMSVIGYFKNQP 435
Query: 368 -------ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
+ + +++DE+DG G +G V + +
Sbjct: 436 GMNVDINGNGKKFVIIMDEVDGMSGGDRGGVGQLAQF----------------------- 472
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
C+K + P+I ICN+ P +R +I F +P + + SRL I E
Sbjct: 473 -----CRKTTT--PMILICNERNLPKMRPFDRICLDLQFRRPDANSIKSRLMTIAIREKF 525
Query: 481 KTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEIL---NVMDIGSQVVGRKDMSRSAFDI 537
K + L + T DIR +N L + K + + N+ +I K+++ FDI
Sbjct: 526 KLDPNIIDKLVQTTRGDIRQIINLLSTISKTTKNIGHENIQEISK--AWEKNIALKPFDI 583
>gi|222480222|ref|YP_002566459.1| replication factor C large subunit [Halorubrum lacusprofundi ATCC
49239]
gi|254797629|sp|B9LPV1.1|RFCL_HALLT RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|222453124|gb|ACM57389.1| AAA ATPase central domain protein [Halorubrum lacusprofundi ATCC
49239]
Length = 500
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 137/332 (41%), Gaps = 68/332 (20%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-- 368
+ ++L G PG+GKT+ AH A G+ VE+NASD R++ IE + N+ +
Sbjct: 37 HEAVVLHGSPGVGKTSAAHALANDMGWETVELNASDQRTADVIE-RFAGRAARNATLGGS 95
Query: 369 ---------DSRPKCLVI-DEIDGALGD-GKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
D+ + LVI DE D G+ +G I ++V
Sbjct: 96 AAGGGAAGGDTASRQLVILDEADNIHGNYDRGGASAITELV------------------- 136
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
K+ G +P++ I ND Y A R LR + F S +V L+ IC
Sbjct: 137 ----KESG-------QPIVLIANDYYDMA-RGLRNATQEIEFRDVSARSIVPVLRDICRK 184
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
E ++ S AL +AE D+R +N LQ + ++ + V D+ V G +D + F
Sbjct: 185 EGIEFESDALERIAERNRGDLRGAINDLQAATEGRDSIAVEDV---VTGDRDKALGLFPY 241
Query: 538 WKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPV 597
+ ++ + ++ S+ V D L I N N+L + +DP
Sbjct: 242 LDAVLKEESAE---EALQSAYAVDETPDDLTKWIEN-------------NVLDV--YDPS 283
Query: 598 MLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVY 629
+ V+ D L N+D+ + TQ + Y
Sbjct: 284 --EVVRAYDFLANADVWLGRVRATQNYSYWRY 313
>gi|298675294|ref|YP_003727044.1| AAA ATPase [Methanohalobium evestigatum Z-7303]
gi|298288282|gb|ADI74248.1| AAA ATPase central domain protein [Methanohalobium evestigatum
Z-7303]
Length = 499
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 104/236 (44%), Gaps = 36/236 (15%)
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA 368
PE++ ++L G G+GKT+ A+ A G+ V+E+NASD R++ I + S+
Sbjct: 41 PEKRAVILHGRAGIGKTSTAYALANDFGWEVIELNASDQRTAEVINKIAGSASKTGSLFG 100
Query: 369 DSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCK 427
+ +V+DE D G + +G I E + K DQ
Sbjct: 101 SGGKRLIVLDEADNLHGTNDRGGARAI-------------SETIKKTDQ----------- 136
Query: 428 KASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIAL 487
PV+ I ND+Y A Q ++ F + + LK IC E + ++
Sbjct: 137 ------PVVLIANDVYGVASSIRNQCLEIK-FNNVQTRSIAASLKKICKKEDINCDDESI 189
Query: 488 TTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQ 543
LA+ ++ D+RS +N LQ E L++ DI + ++D S F + +IF+
Sbjct: 190 EKLAQDSDGDVRSAINDLQAAVSGNE-LHIEDIATS---QRDTEESIFKVLTKIFK 241
>gi|241111852|ref|XP_002399407.1| replication factor C large subunit, putative [Ixodes scapularis]
gi|215492969|gb|EEC02610.1| replication factor C large subunit, putative [Ixodes scapularis]
Length = 706
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 110/242 (45%), Gaps = 41/242 (16%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSR 371
K LL G PG+GKTT A++ A+ G+ V+E+NASD RS +++ ++ +++ ++ +
Sbjct: 248 KAALLSGAPGVGKTTTANLVAREAGFSVLELNASDTRSKKSLKQEVAELLGNQTLTGATT 307
Query: 372 PKC---------LVIDEIDGALGD-GKGAVEVILKMVSAERKSNTAKENVAKEDQPEKIS 421
+ L++DE+DG G+ +G V+ ++ ++ + R
Sbjct: 308 ARAREGLSSKHMLIMDEVDGMAGNQDRGGVQELIALIKSTRI------------------ 349
Query: 422 KKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMK 481
P++CICND P +RSL F +P V ++ + + I E +
Sbjct: 350 ------------PIVCICNDRSHPKMRSLVNYCFDLRFYRPQVKQIQAAMMSIACKEGLS 397
Query: 482 TSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVV-GRKDMSRSAFDIWKE 540
+ + + + D+R L+ L + + ++ + + G KD+ FD+ ++
Sbjct: 398 VTPAVVQEIIMASNQDVRQVLHNLSLWTARTKGISSEQVKADTGKGTKDIRLGPFDVVRK 457
Query: 541 IF 542
I
Sbjct: 458 IL 459
>gi|403213501|emb|CCK68003.1| hypothetical protein KNAG_0A03150 [Kazachstania naganishii CBS
8797]
Length = 855
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 135/333 (40%), Gaps = 62/333 (18%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSR 371
+ +L GPPG+GKTT AH+ + GY ++E NASD RS S + + + + SV+ +
Sbjct: 342 RTAMLSGPPGIGKTTAAHLLCEELGYDILEKNASDVRSKSLLNAGVKNALGNMSVVGYFK 401
Query: 372 PK-----------CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
K +++DE+DG G +G V + + RK++T
Sbjct: 402 QKDNYEDINGKKFVVIMDEVDGMSGGDRGGVGQLAQYC---RKTDT-------------- 444
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
P+I ICN+ P +R + F +P + + +RL I E
Sbjct: 445 -------------PMILICNERNLPKMRPFDRTCLDIQFRRPDANSIRARLMTIAVREGF 491
Query: 481 KTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVG-RKDMSRSAFDIWK 539
+ + L + T DIR +N L + K + + +I K+++ FDI
Sbjct: 492 QLDPTIIDKLVQSTRGDIRQIINLLSTISKTTKKIGHGNINEITKSWEKNVALKPFDITH 551
Query: 540 EIFQKRKTKRLRNSVSSSSNVSN--------EFDFLHSLISNRGDYDVIFDGIHENILQL 591
++ R+ + SSS N +FDF +I +Y IH N L
Sbjct: 552 KMLD----GRIYTELGSSSFTLNDKIALYFDDFDFTPLMIQE--NY------IHCNPGNL 599
Query: 592 QYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQM 624
++ D + DL+ + I T+Q+
Sbjct: 600 PPGVTPLMAVANAADSISQGDLVERKIRSTEQL 632
>gi|435848165|ref|YP_007310415.1| AAA ATPase [Natronococcus occultus SP4]
gi|433674433|gb|AGB38625.1| AAA ATPase [Natronococcus occultus SP4]
Length = 495
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 105/229 (45%), Gaps = 36/229 (15%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS 370
+K +++ G PG+GKT+ AH A G+ V+E+NASD R + IE + + ++ A
Sbjct: 37 RKAVIVHGSPGVGKTSAAHALANDMGWPVMELNASDSRGADVIERVAGEASKSGTLTAGG 96
Query: 371 RPKCLVI-DEIDGALGDGK-GAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKK 428
+ LVI DE D G+ G + ++V K
Sbjct: 97 SGRRLVILDEADNFHGNADYGGSREVTRVV----------------------------KD 128
Query: 429 ASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALT 488
AS +P++ I N+ Y + +SLR + F S +V L+ IC E ++ AL
Sbjct: 129 AS--QPMVLIANEFYEMS-QSLRDACETIEFRDVSKRSIVPVLRDICRREDVEFEEEALE 185
Query: 489 TLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
+AE T D+RS +N LQ + ++ E L V D+ V +D + FD
Sbjct: 186 KIAESTSGDLRSAVNDLQAVAEEAERLTVEDV---VTSERDTTEGIFDF 231
>gi|302694127|ref|XP_003036742.1| hypothetical protein SCHCODRAFT_46550 [Schizophyllum commune H4-8]
gi|300110439|gb|EFJ01840.1| hypothetical protein SCHCODRAFT_46550 [Schizophyllum commune H4-8]
Length = 862
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 91/207 (43%), Gaps = 44/207 (21%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKI------LD------ 359
+ +L+ G PG+GKTT AH+ AK G+ VE+NASD RS +EN + +D
Sbjct: 385 RAVLITGSPGIGKTTSAHLCAKLAGFTPVELNASDARSKKLVENGMNINNTTIDKWYQGK 444
Query: 360 -VVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPE 418
V + V R CL++DE+DG +G V + ++
Sbjct: 445 GAVNTDGVTITDR-SCLIMDEVDGMSAGDRGGVGALNALI-------------------- 483
Query: 419 KISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNE 478
KK + P+ICI ND A L L+ F +P V V SR+ I E
Sbjct: 484 --------KKTKI--PIICIANDRNAQKLTPLKGTCFNLPFQKPQVQAVRSRVLTIAFKE 533
Query: 479 SMKTSSIALTTLAEYTECDIRSCLNTL 505
MK + + L + ++ DIR LN +
Sbjct: 534 KMKIPANVVDQLIQGSQSDIRQVLNMM 560
>gi|297673340|ref|XP_002814727.1| PREDICTED: replication factor C subunit 1 [Pongo abelii]
Length = 667
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 138/351 (39%), Gaps = 102/351 (29%)
Query: 168 EQEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLS---DEQTNREVLLW 224
EQ A + +S + +D S K V LWVDKY P S ++ D+ ++L W
Sbjct: 110 EQVAEETSGDSKARNLADDSSENK--VENLLWVDKYKPTSLKTIIGQQGDQSCANKLLRW 167
Query: 225 LKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNRGNRWSNGNFRNSNN 284
L+ W +S+SE+ ++H+ F+ K+ G+ +
Sbjct: 168 LRNWQ--------KSSSED-----KKHAA-------KFGKFSGKDDGSSF---------- 197
Query: 285 LEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNA 344
K LL GPPG+GKTT A + + GY VE+NA
Sbjct: 198 ---------------------------KAALLSGPPGVGKTTTASLVCQELGYSYVELNA 230
Query: 345 SDDRSSSTIENKILDVVQMNSVMA---------DSRPKCLVIDEIDGALG-DGKGAVEVI 394
SD RS S+++ + + + S+ S L++DE+DG G + +G ++ +
Sbjct: 231 SDTRSKSSLKAIVAESLNNTSIKGFYSNGAASSVSTKHALIMDEVDGMAGNEDRGGIQEL 290
Query: 395 LKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIA 454
+ ++ + KI P+IC+CND P +RSL
Sbjct: 291 IGLI-----------------KHTKI-------------PIICMCNDRNHPKVRSLVHYC 320
Query: 455 KVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
F +P V ++ + I E +K A+ + DIR L+ L
Sbjct: 321 FDLRFQRPRVEQIKGAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNL 371
>gi|334331382|ref|XP_001374096.2| PREDICTED: replication factor C subunit 1-like [Monodelphis
domestica]
Length = 1279
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/403 (22%), Positives = 158/403 (39%), Gaps = 87/403 (21%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM---- 367
K LL GPPG+GKTT A + + GY VE+NASD RS S+++ + + + S+
Sbjct: 775 KAALLSGPPGVGKTTTASLVCEELGYSYVELNASDTRSKSSLKEIVAESLNNTSIKDFCS 834
Query: 368 ----ADSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISK 422
+ L++DE+DG G + +G ++ ++ ++ + KI
Sbjct: 835 SAAHSGGTKHVLIMDEVDGMAGTEDRGGIQELIGLI-----------------KHTKI-- 875
Query: 423 KKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKT 482
P+IC+CND P +RSL F +P + ++ + + E +K
Sbjct: 876 -----------PIICMCNDRNHPKMRSLVHYCFDLRFQRPRIEQIKGAMMSVAFKEGLKI 924
Query: 483 SSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVV-GRKDMSRSAFDIWKEI 541
A+ + DIR L+ L + + L + +KD+ FD+ +++
Sbjct: 925 PPPAMNEIILAANHDIRQVLHNLSMWCAENKALTYDQAKTDSSRAKKDIKLGPFDVARKV 984
Query: 542 FQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQ-------YH 594
F + + S V F H DY + + EN L ++
Sbjct: 985 FTAGE------ETAHMSLVDKSDLFFH-------DYSIAPLFVQENYLHVKPAAAGGDMK 1031
Query: 595 DPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKS 654
+ML + + D + + DL+ + I Q L P AI L ++ +
Sbjct: 1032 KHLMLLS-RAADSICDGDLVDRQIRSRQNWSLL---PTQAIYSSVLPGELMR-------- 1079
Query: 655 YQRYRNAFMEKMDIFKSW---------HSKIPPYISRHLSTES 688
+M + F SW H +I ++ H+S E+
Sbjct: 1080 ------GYMTQFPSFPSWLGKFSSTGKHDRIVQELALHMSLET 1116
>gi|151945307|gb|EDN63550.1| replication factor C subunit 1 [Saccharomyces cerevisiae YJM789]
Length = 861
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 142/358 (39%), Gaps = 67/358 (18%)
Query: 287 YENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASD 346
+ENS G K G + +L GPPG+GKTT AH+ A+ GY ++E NASD
Sbjct: 327 WENSKKNGF-----KHAGKDGSGVFRAAMLYGPPGIGKTTAAHLVAQELGYDILEQNASD 381
Query: 347 DRSSSTIENKILDVVQMNSVMA-----------DSRPKCLVIDEIDGALGDGKGAVEVIL 395
RS + + + + + SV+ + + +++DE+DG G +G V +
Sbjct: 382 VRSKTLLNAGVKNALDNMSVVGYFKHNEEAQNLNGKHFVIIMDEVDGMSGGDRGGVGQLA 441
Query: 396 KMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAK 455
+ C+K S P+I ICN+ P +R ++
Sbjct: 442 QF----------------------------CRKTST--PLILICNERNLPKMRPFDRVCL 471
Query: 456 VHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEIL 515
F +P + + SRL I E+ K + L + T DIR +N L + + +
Sbjct: 472 DIQFRRPDANSIKSRLMTIAIRENFKLDPNVIDRLIQTTRGDIRQVINLLSTISTTTKTI 531
Query: 516 NVMDIGS-QVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNR 574
N +I K+++ FDI R+ + S S F +
Sbjct: 532 NHENINEISKAWEKNIALKPFDI---------AHRMLDGQIYSDIGSRNFTLNDKIALYF 582
Query: 575 GDYDVIFDGIHENILQLQYHDPVMLK--------TVKCLDCLGNSDLMHQYIMRTQQM 624
D+D I EN L + P +LK + +C+ D++ + I ++Q+
Sbjct: 583 DDFDFTPLMIQENYLSTR---PSVLKPGQSHLEAVAEAANCISLGDIVEKKIRSSEQL 637
>gi|448705304|ref|ZP_21700804.1| replication factor C large subunit [Halobiforma nitratireducens JCM
10879]
gi|445795705|gb|EMA46228.1| replication factor C large subunit [Halobiforma nitratireducens JCM
10879]
Length = 517
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 106/227 (46%), Gaps = 36/227 (15%)
Query: 313 VLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRP 372
+++ G PG+GKT+ AH A G+ ++E+NASD+R + IE + + ++ A
Sbjct: 39 AVIVHGSPGVGKTSAAHALANDMGWPMMELNASDNRQADVIERIAGEASKTGTLTAGGSG 98
Query: 373 KCLVI-DEIDGALGDGK-GAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKAS 430
+ LVI DE D G+ G + ++V K A+
Sbjct: 99 RRLVILDEADNFHGNADYGGSREVTRVV----------------------------KNAT 130
Query: 431 LLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTL 490
+PV+ + N+ Y + +SLR + F S +V L+ IC E ++ AL +
Sbjct: 131 --QPVVLVANEFYDMS-QSLRNACETIEFRDVSKRSIVPVLRDICRKEGVEFEDDALEKI 187
Query: 491 AEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
AE T D+RS +N LQ + ++ E L V D+ V G++D + FD
Sbjct: 188 AEDTSGDLRSAVNDLQAVAEEAERLTVEDV---VTGQRDTTEGIFDF 231
>gi|150400075|ref|YP_001323842.1| replication factor C large subunit [Methanococcus vannielii SB]
gi|166977386|sp|A6URV8.1|RFCL_METVS RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|150012778|gb|ABR55230.1| AAA ATPase central domain protein [Methanococcus vannielii SB]
Length = 492
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 136/333 (40%), Gaps = 71/333 (21%)
Query: 310 EQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMAD 369
+QK +LL GPPG GKTT+AH A + V+E+NASD R+ I + S+
Sbjct: 38 KQKPVLLFGPPGSGKTTMAHAIANDYNFDVIELNASDKRNKDVISQVVGTAATSKSLTG- 96
Query: 370 SRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKK 428
+ +V+DE+DG G D +G V I+K++ EN
Sbjct: 97 -KRTLIVLDEVDGLSGNDDRGGVSEIIKVLKNA-------EN------------------ 130
Query: 429 ASLLRPVICICNDLYAPALRSLRQ------IAKVHVFIQPSVSRVVSRLKHICNNESMKT 482
PVI ND+Y PAL SLR VH P V L+ I E +
Sbjct: 131 -----PVILTANDVYKPALSSLRNSVTMVDAGSVHTNSIPPV------LRKIALKEGFEI 179
Query: 483 SSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIF 542
+ ++ + D+R+ +N LQ L I + D ++ + +D +S FD + I
Sbjct: 180 DEKVIKLISSHAGGDLRAAINDLQALLTGGSI-EIED--AKNLPDRDSEKSIFDAIRIIM 236
Query: 543 QKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQ--LQYHDPVMLK 600
KT + S++ ++ E + IS EN+ + L+Y D
Sbjct: 237 ---KTTHYDIATSATVDLKEELGTVSEWIS-------------ENLPKEYLKYGD----- 275
Query: 601 TVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPL 633
K D L SD+ + R Q L+ Y L
Sbjct: 276 LAKGYDYLSKSDVFLGRVYRRQYFGLWRYASAL 308
>gi|50306785|ref|XP_453368.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642502|emb|CAH00464.1| KLLA0D06897p [Kluyveromyces lactis]
Length = 835
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 96/230 (41%), Gaps = 44/230 (19%)
Query: 290 SNSKGIQD--SWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDD 347
N IQ +W + S P + ++L GPPG+GKTT AH+ AK GY V+E NASD
Sbjct: 306 GNKGAIQKLKTWLESWSSGKKPSMRAVMLSGPPGIGKTTAAHLVAKSLGYDVLEKNASDV 365
Query: 348 RSSSTIENKI---LD---VVQMNSVMAD------SRPKCLVIDEIDGALGDGKGAVEVIL 395
RS + + LD V+ M ++D + +++DE+DG G +G V +
Sbjct: 366 RSKGLLNASVKFALDHKSVIGMFKSISDDHYSKNGKRFVIIMDEVDGMSGGDRGGVGQLA 425
Query: 396 KMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAK 455
+ RK+NT P+I ICN+ P +R
Sbjct: 426 QYC---RKTNT---------------------------PMILICNERNLPKMRPFDHSVL 455
Query: 456 VHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
F +P V +RL I E K + L T D+R +N L
Sbjct: 456 DIPFRRPDAQAVKARLMTIAMREKFKLDPNVIDRLVSVTRGDMRQIINLL 505
>gi|374636438|ref|ZP_09708008.1| AAA ATPase central domain protein [Methanotorris formicicus
Mc-S-70]
gi|373558999|gb|EHP85314.1| AAA ATPase central domain protein [Methanotorris formicicus
Mc-S-70]
Length = 482
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 107/233 (45%), Gaps = 36/233 (15%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSR 371
K ++L G PG GKTTLAH A+ G+ V+E+NASD R+ + I + S+ +
Sbjct: 40 KPIILVGNPGCGKTTLAHALARDYGFDVIELNASDKRNRAAIRQIVGTASTSKSLTG--K 97
Query: 372 PKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKAS 430
+++DE+DG G + G V ILK++ +
Sbjct: 98 NILIILDEVDGISGTEDSGGVSEILKVIKEAK---------------------------- 129
Query: 431 LLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTL 490
P+I ND+Y P L+ LR + +V + +++ LK I E++ L +
Sbjct: 130 --NPIILTANDIYKPTLKPLRDVCEVINVPNVHTNTILAVLKRIAKKENLDVDEKTLKII 187
Query: 491 AEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQ 543
A+++ D+R+ +N L+ L +I +I S + R D R+ FD + I +
Sbjct: 188 AKHSGGDLRAAINDLEALALGGKI--NQEIASHLPDR-DTERTIFDAMRIILK 237
>gi|428672451|gb|EKX73365.1| replication factor RFC1 C terminal domain containing protein
[Babesia equi]
Length = 962
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 86/197 (43%), Gaps = 31/197 (15%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSR 371
K LL G PG+GKTT A + A+H Y VE NASD RS + IE L ++ +
Sbjct: 528 KCALLSGSPGIGKTTCAKLVAEHFKYTCVEFNASDFRSKAAIEKIALMATGGQTLGSTGV 587
Query: 372 PKCLV-IDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKAS 430
L+ +DE+DG +G + +L ++ + + C
Sbjct: 588 SNTLILLDEVDGISSGDRGGIPAVLSLIDSTK-----------------------C---- 620
Query: 431 LLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTL 490
P+IC+CND + L F P+ + +R++ IC E ++ L+ L
Sbjct: 621 ---PIICVCNDKSFQKMSGLVNKCYDIKFSSPTEDQFAARVRRICTIEKIEIPEKRLSEL 677
Query: 491 AEYTECDIRSCLNTLQF 507
E + D+R LN +QF
Sbjct: 678 YEQSNGDLRYTLNYIQF 694
>gi|452824845|gb|EME31845.1| chromosome transmission fidelity protein 18 [Galdieria sulphuraria]
Length = 585
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 143/358 (39%), Gaps = 82/358 (22%)
Query: 195 HEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTI 254
H +LWVDK+ PN TELL D R++L W V +S+S + S
Sbjct: 4 HNKLWVDKHHPNRITELLGDATVQRQLLHTFIGWKQSV-----QSSSSLIDS-------- 50
Query: 255 SQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVL 314
D S + RW GN + L
Sbjct: 51 -------DQSVSSWKGSQRW-EGN--------------------------------KNTL 70
Query: 315 LLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKC 374
++ GPPG+GKT + +H G+ V ++A ++ +++ +K+ + + + A P C
Sbjct: 71 IVWGPPGIGKTVAIPMLLQHVGFQVHYISAIEENGWNSLLSKVEALRNKSCLFASQLPPC 130
Query: 375 LVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRP 434
+V+D++ A G V+ +K++ S+ AK V G K S+
Sbjct: 131 IVLDDVVFAAGQVTN-VDKCIKIL-----SDNAKGGV----------NSTGALKNSVW-- 172
Query: 435 VICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSI--------A 486
V+ IC D Y+ L +LR AK+ F Q ++ R + NE + +
Sbjct: 173 VVIICEDAYSRGLATLRPFAKIVHFGQSDTKSLLFRSMRVLTNERNEANGHDISQQERDF 232
Query: 487 LTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRS-AFDIWKEIFQ 543
L L E DIR LN LQF+ + L V Q KD+SRS DI IF+
Sbjct: 233 LKYLCEAAAGDIRWVLNQLQFVQNHFQYLPVS--FQQFDDFKDLSRSNMIDIMNSIFE 288
>gi|242011918|ref|XP_002426690.1| Replication factor C subunit, putative [Pediculus humanus corporis]
gi|212510861|gb|EEB13952.1| Replication factor C subunit, putative [Pediculus humanus corporis]
Length = 842
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 146/357 (40%), Gaps = 98/357 (27%)
Query: 198 LWVDKYAPNSFTELLSD--EQTN-REVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTI 254
LWV+KY P S ++ E++N +++ WL+ W HST
Sbjct: 277 LWVEKYKPKSTKAIIGQGGEKSNVKKLTYWLQNWH-------------------LNHST- 316
Query: 255 SQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVL 314
+ND T+ N +G++ K
Sbjct: 317 -----KNDKKLTKPAPWNTNDDGSYF-------------------------------KAA 340
Query: 315 LLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA------ 368
LL GPPG+GKTT A++ + G+ +VE NASD RS ++ ++ D++ S+
Sbjct: 341 LLSGPPGVGKTTSAYLICQELGFDIVEFNASDTRSKRLLQEEVSDLLTSKSLQGYFDGNR 400
Query: 369 -DSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGC 426
+ + L++DE+DG G + +G V+ +++++ +
Sbjct: 401 STFKKQVLLMDEVDGMSGNEDRGGVQELIQLIKQTK------------------------ 436
Query: 427 KKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIA 486
P+I ICND P +RSL F +P + ++ + + IC E + S +
Sbjct: 437 ------IPIIGICNDRNHPKMRSLVNYCFDIRFQRPPIKQIKAAMLSICFKEKINISGDS 490
Query: 487 LTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVV-GRKDMSRSAFDIWKEIF 542
L L + D+R L+ L L ++ L+ D G+K ++ + +D+ +++F
Sbjct: 491 LEELIVSSNHDLRQVLHRLSLLTFVEKSLSEEDARKNSSDGKKPLNLNPWDVVRKVF 547
>gi|435850859|ref|YP_007312445.1| DNA polymerase III, gamma/tau subunit [Methanomethylovorans
hollandica DSM 15978]
gi|433661489|gb|AGB48915.1| DNA polymerase III, gamma/tau subunit [Methanomethylovorans
hollandica DSM 15978]
Length = 500
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 110/245 (44%), Gaps = 39/245 (15%)
Query: 307 GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV 366
G PEQK +LL GP G+GKT+ AH A+ + V+E+NASD R++ IE +M+++
Sbjct: 39 GTPEQKAVLLHGPAGVGKTSTAHALAQDMEWEVIELNASDQRTADVIERIAGSASRMSTL 98
Query: 367 MADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGC 426
S + +V+DE D G +++R A N+
Sbjct: 99 GGMSSKRLIVLDEADNMHG-------------TSDRGGPKAIGNII-------------- 131
Query: 427 KKASLLRPVICICNDLYA--PALRS-LRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTS 483
+ +P++ I ND Y ++RS L +I F ++ LK + E +
Sbjct: 132 --LATGQPIVLIANDAYGIPSSVRSNLLEIK----FNALQTRSMIPALKQVAQKEGLMCG 185
Query: 484 SIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQ 543
+ +AE + D+RS +N LQ + + +N+ DI + +D S F + + IF+
Sbjct: 186 VGIIEKIAENADGDMRSAINDLQAVAVGRNEINIEDIAT---AERDNKESIFKVMERIFK 242
Query: 544 KRKTK 548
K
Sbjct: 243 GTDAK 247
>gi|268559586|ref|XP_002637784.1| C. briggsae CBR-RFC-1 protein [Caenorhabditis briggsae]
Length = 825
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 106/250 (42%), Gaps = 54/250 (21%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMAD-S 370
K LL G PG+GKTT A++A + G +VE+NASD R+ +E KI ++ + +
Sbjct: 334 KAALLSGSPGVGKTTCAYMACQQLGLKLVEMNASDVRNKKHLEAKIGELSGSHQIEEFFG 393
Query: 371 RPKC-----------LVIDEIDGALG--DGKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
KC L++DE+DG G D G E+I + KE +
Sbjct: 394 VKKCVPQDNSKVHHVLIMDEVDGMSGNEDRAGISELI---------------QIIKESK- 437
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
P+ICICND +RSL F +P V + SR+ IC+
Sbjct: 438 ---------------IPIICICNDRMHTKIRSLANYCYDLRFPKPRVEMIRSRMMTICSQ 482
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
E +K + L + E + D+R + LQ K + V +KD+S F+
Sbjct: 483 EKLKITKEDLDEIIELSGHDVRQTIYNLQMRSKS---------SNAKVNKKDLSWGPFEA 533
Query: 538 WKEIFQKRKT 547
+ + R T
Sbjct: 534 ARRLLDSRTT 543
>gi|429193387|ref|YP_007179065.1| AAA ATPase [Natronobacterium gregoryi SP2]
gi|429137605|gb|AFZ74616.1| AAA ATPase [Natronobacterium gregoryi SP2]
Length = 535
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 102/229 (44%), Gaps = 38/229 (16%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS 370
+ +++ G PG+GKT+ AH A G+ V+E+NASD R + IE + + ++
Sbjct: 79 RDAVIVHGSPGIGKTSAAHALANDMGWPVMELNASDSRGADVIERVAGEAAKSGTLTGGG 138
Query: 371 RPKCLVI-DEIDGALG--DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCK 427
+ LVI DE D G D G+ EV + A+
Sbjct: 139 AGRRLVILDEADNFHGNADYGGSREVTRVVKEAD-------------------------- 172
Query: 428 KASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIAL 487
+PV+ + N+ Y + +SLR + F S +V L+ IC E ++ AL
Sbjct: 173 -----QPVVLVANEFYEMS-QSLRNACEAIEFRDVSKRSIVPVLRDICRREGIEFEEEAL 226
Query: 488 TTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFD 536
+AE T D+RS +N LQ + ++ E L V D V G +D + FD
Sbjct: 227 KQIAEETSGDLRSAVNDLQAVAEEAERLTVADA---VTGERDTTEGIFD 272
>gi|402222111|gb|EJU02178.1| DNA replication factor C large subunit [Dacryopinax sp. DJM-731
SS1]
Length = 955
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 87/207 (42%), Gaps = 43/207 (20%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRS------SSTIENKILDVVQMNS 365
+ +L+ GPPG+GKTT AH+ A+ GY +EVNASD RS S+ I N+ LD
Sbjct: 433 RAVLISGPPGIGKTTSAHLVAQVQGYTPIEVNASDARSKKLIMNSTNISNQSLDGWMHGG 492
Query: 366 V-------MADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPE 418
+ S L++DE+DG G +G + + +++ R
Sbjct: 493 TDTTTAAGIDISGRSVLIMDEVDGMSGSDRGGIGALNQLIKKTRI--------------- 537
Query: 419 KISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNE 478
P+ICI ND ++ L+ F +P + SR+ I E
Sbjct: 538 ---------------PIICIANDRTLQKMKPLQGTTYNLPFRKPDAKAIRSRIMSILFKE 582
Query: 479 SMKTSSIALTTLAEYTECDIRSCLNTL 505
MK + L +CDIR LN L
Sbjct: 583 KMKIPPNVVDQLVTGVQCDIRQVLNML 609
>gi|448340220|ref|ZP_21529193.1| replication factor C large subunit [Natrinema gari JCM 14663]
gi|445630526|gb|ELY83787.1| replication factor C large subunit [Natrinema gari JCM 14663]
Length = 500
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 111/237 (46%), Gaps = 36/237 (15%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-D 369
+K +++ G PG+GKT+ AH A G+ V+E+NASD R + IE + + ++ +
Sbjct: 37 RKSVIVHGSPGVGKTSAAHALAGDMGWPVMELNASDSRGADVIEKIAGEAAKSGTLTGGE 96
Query: 370 SRPKCLVIDEIDGALGDGK-GAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKK 428
+ + +V+DE D G+ G + ++V K
Sbjct: 97 AGRRLVVLDEADNFHGNADYGGSREVTRVV----------------------------KD 128
Query: 429 ASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALT 488
AS +P++ + N+ Y + +SLR + F S +V L+ IC E ++ AL
Sbjct: 129 AS--QPIVLVANEFYEMS-KSLRNACETIEFRDVSKRSIVPVLRDICRREGVEFEEEALE 185
Query: 489 TLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKR 545
+AE T D+RS +N LQ + ++ E L V D+ V +D + FD E+ +++
Sbjct: 186 KIAESTSGDLRSAVNDLQAVAEEAERLTVDDV---VTSERDTTEGIFDFLDELIKEK 239
>gi|161527778|ref|YP_001581604.1| ATPase central domain-containing protein [Nitrosopumilus maritimus
SCM1]
gi|160339079|gb|ABX12166.1| AAA ATPase central domain protein [Nitrosopumilus maritimus SCM1]
Length = 385
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 157/370 (42%), Gaps = 74/370 (20%)
Query: 289 NSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDR 348
N S+ W K + P LLL GPPG+GKTT+A + AK GY ++ +NASD R
Sbjct: 17 NEESRAAIMEWFAKWKKGTKP----LLLAGPPGIGKTTMAFLVAKQFGYDMIGLNASDVR 72
Query: 349 SSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALGDGK-GAVEVILKMVSAERKSNTA 407
S S I N+IL V + +V P V DE+DG G G G V ++
Sbjct: 73 SKSRI-NEILTPV-LGNVSVLGTPMIFV-DEVDGIHGRGDYGGVAALV------------ 117
Query: 408 KENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVF--IQPSVS 465
++ KE P+I ND + +++++++ K F I P +
Sbjct: 118 --DILKEPTV----------------PIILAANDDTSDKMKNIKKVVKTISFKKIPPRLL 159
Query: 466 RVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVV 525
RV L++I ES K S +L + + + DIRS +N Q S V
Sbjct: 160 RV--YLENILKKESAKLSPGSLIKVIDKSRGDIRSMINLTQ---------------SMVT 202
Query: 526 GRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSL-ISNRGDYDVIFDGI 584
G + + F+ + N+ S +V L+S+ I R + + I
Sbjct: 203 GFNPQTETT-------FENIDVEDGVNAFFKSKSVDEARGVLYSMQIDPREKINAFYSSI 255
Query: 585 HENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQI 644
+ L DP L K L+ + +D+++ I+RTQ L Y + I ++ ++
Sbjct: 256 VMSSL-----DPETL--AKYLEIISEADMLYGKIVRTQNWRLLRYLNDILIKLYHDDDRV 308
Query: 645 Q--KPNLEWP 652
+ + NL WP
Sbjct: 309 RYAQYNLSWP 318
>gi|397772592|ref|YP_006540138.1| AAA ATPase central domain protein [Natrinema sp. J7-2]
gi|397681685|gb|AFO56062.1| AAA ATPase central domain protein [Natrinema sp. J7-2]
Length = 500
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 111/237 (46%), Gaps = 36/237 (15%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-D 369
+K +++ G PG+GKT+ AH A G+ V+E+NASD R + IE + + ++ +
Sbjct: 37 RKSVIVHGSPGVGKTSAAHALAGDMGWPVMELNASDSRGADVIEKIAGEAAKSGTLTGGE 96
Query: 370 SRPKCLVIDEIDGALGDGK-GAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKK 428
+ + +V+DE D G+ G + ++V K
Sbjct: 97 AGRRLVVLDEADNFHGNADYGGSREVTRVV----------------------------KD 128
Query: 429 ASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALT 488
AS +P++ + N+ Y + +SLR + F S +V L+ IC E ++ AL
Sbjct: 129 AS--QPIVLVANEFYEMS-KSLRNACETIEFRDVSKRSIVPVLRDICRREGVEFEEEALE 185
Query: 489 TLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKR 545
+AE T D+RS +N LQ + ++ E L V D+ V +D + FD E+ +++
Sbjct: 186 KIAESTSGDLRSAVNDLQAVAEEAERLTVDDV---VTSERDTTEGIFDFLDELIKEK 239
>gi|390594938|gb|EIN04346.1| DNA replication factor C large subunit [Punctularia strigosozonata
HHB-11173 SS5]
Length = 869
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 90/206 (43%), Gaps = 42/206 (20%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRS------SSTIENKILDVVQMNS 365
+ +L+ GPPG+GKTT AH+ AK GY +E+NASD RS S+ I N+ LD
Sbjct: 386 RAILITGPPGIGKTTSAHLVAKLEGYTPIELNASDARSKKLVESSTNIMNQSLDGWMGGG 445
Query: 366 VMAD------SRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEK 419
+ + CL++DE+DG +G + + ++ RK+
Sbjct: 446 DATNAAGIKITEKSCLIMDEVDGMSAGDRGGIGALNALI---RKTRI------------- 489
Query: 420 ISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNES 479
P+ICI ND A ++ L+ F +P + + SR+ I E
Sbjct: 490 --------------PIICIANDRTAQKMKPLQGSTFSLTFKRPEAATIRSRIMSIAFREK 535
Query: 480 MKTSSIALTTLAEYTECDIRSCLNTL 505
+K + + L + DIR LN L
Sbjct: 536 LKVPANVVDQLINSAQSDIRQVLNML 561
>gi|170106533|ref|XP_001884478.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164640824|gb|EDR05088.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 950
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 90/204 (44%), Gaps = 42/204 (20%)
Query: 314 LLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIE------NKILD-----VVQ 362
+L+ G PG+GKTT AH+ AK G+ +E+NASD RS +E NK LD
Sbjct: 466 VLITGSPGIGKTTSAHLCAKLEGFTPIELNASDARSKKLVENGMNINNKSLDGYINGAHD 525
Query: 363 MNSVMADSRPK-CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKIS 421
NS+ K CL++DE+DG +G V + ++
Sbjct: 526 TNSLGVQITDKTCLIMDEVDGMSAGDRGGVGALNALI----------------------- 562
Query: 422 KKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMK 481
KK + P+ICI ND A L+ L F +P V+ + SR+ I E MK
Sbjct: 563 -----KKTKI--PIICIANDRQAQKLKPLVATTFNLTFQKPQVNSIRSRILTIAFKEKMK 615
Query: 482 TSSIALTTLAEYTECDIRSCLNTL 505
+ + L T+ DIR LN L
Sbjct: 616 IPANVIDQLITGTQSDIRQVLNML 639
>gi|392574887|gb|EIW68022.1| hypothetical protein TREMEDRAFT_32699, partial [Tremella
mesenterica DSM 1558]
Length = 720
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 43/207 (20%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKI-LDVVQMNSVMADS 370
+ +L+ GPPG+GKTT AH+ AK GY+ +E+NASD RS IE+ +D ++ +
Sbjct: 206 RAVLISGPPGIGKTTSAHLMAKEAGYNPIELNASDARSKKLIEHHTNIDNASLDGFFQGA 265
Query: 371 RPK------------CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPE 418
K CL++DE+DG +G V + ++ R
Sbjct: 266 GAKTTVVDMKVDSKTCLIMDEVDGMSAGDRGGVGALNALIKKTR---------------- 309
Query: 419 KISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNE 478
P+I ICND ++ L F +P + V SR+ I E
Sbjct: 310 --------------IPMILICNDKSLQKMKPLINTTYGMPFKRPGPNEVRSRIMSILYKE 355
Query: 479 SMKTSSIALTTLAEYTECDIRSCLNTL 505
+K + + L + DIR LN L
Sbjct: 356 KLKIPTNVVDQLVQGANSDIRQVLNML 382
>gi|301779603|ref|XP_002925218.1| PREDICTED: LOW QUALITY PROTEIN: replication factor C subunit 1-like
[Ailuropoda melanoleuca]
Length = 1146
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 105/241 (43%), Gaps = 40/241 (16%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA--- 368
K LL GPPG+GKTT A + + GY VE+NASD RS ++++ + + + S+
Sbjct: 644 KAALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKNSLKEIVAESLNNTSITGFYS 703
Query: 369 -----DSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISK 422
S L++DE+DG G + +G ++ ++ ++ + KI
Sbjct: 704 NGAAHVSTKHALIMDEVDGMAGNEDRGGIQELIGLI-----------------KHTKI-- 744
Query: 423 KKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKT 482
P+IC+CND P +RSL F +P V ++ + I E +K
Sbjct: 745 -----------PIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAMMSIAFKEGLKI 793
Query: 483 SSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV-VGRKDMSRSAFDIWKEI 541
A+ + DIR L+ L + + L + +KD+ FD+ +++
Sbjct: 794 PPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRAKKDIKLGPFDVARKV 853
Query: 542 F 542
F
Sbjct: 854 F 854
>gi|73951876|ref|XP_536259.2| PREDICTED: replication factor C subunit 1 [Canis lupus familiaris]
Length = 1145
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 95/435 (21%), Positives = 162/435 (37%), Gaps = 115/435 (26%)
Query: 298 SWHKKTRSTGPPEQK------------------VLLLCGPPGLGKTTLAHVAAKHCGYHV 339
+WH+ GPPE K LL GPPG+GKTT A + + GY
Sbjct: 615 NWHR-----GPPEDKKRAKFGKFAGKDDGSSFKAALLSGPPGVGKTTTASLVCQELGYSY 669
Query: 340 VEVNASDDRSSSTIENKILDVVQMNSVMA---------DSRPKCLVIDEIDGALG-DGKG 389
VE+NASD RS ++++ + + + S+ L++DE+DG G + +G
Sbjct: 670 VELNASDTRSKNSLKEVVAESLNNTSITGFYSNGAAHSVGSKHALIMDEVDGMAGNEDRG 729
Query: 390 AVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRS 449
++ ++ ++ + KI P+IC+CND P +RS
Sbjct: 730 GIQELIGLI-----------------KHTKI-------------PIICMCNDRNHPKIRS 759
Query: 450 LRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLD 509
L F +P V ++ + I E +K A+ + DIR L+ L
Sbjct: 760 LVHYCFDLRFQRPRVEQIKGAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWC 819
Query: 510 KKKEILNVMDIGSQV-VGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLH 568
+ + L + +KD+ FD+ +++F + S V F H
Sbjct: 820 ARSKALTYDQAKADSHRAKKDIRLGPFDVARKVFA------AGEETAHMSLVDKSDLFFH 873
Query: 569 SLISNRGDYDVIFDGIHENILQLQYHDPV---------MLKTVKCLDCLGNSDLMHQYIM 619
DY + + EN L ++ PV ++ + D + + DL+ + I
Sbjct: 874 -------DYSIAPLFVQENYLHVK---PVAAGGDMKKHLMLLSRAADSICDGDLVDRQIR 923
Query: 620 RTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSW------- 672
Q L P AI L ++ + +M + F SW
Sbjct: 924 SKQNWSLL---PTQAIYASVLPGELMR--------------GYMTQFPTFPSWLGKHSST 966
Query: 673 --HSKIPPYISRHLS 685
H +I ++ H+S
Sbjct: 967 GKHDRIVQDLALHMS 981
>gi|281342306|gb|EFB17890.1| hypothetical protein PANDA_014667 [Ailuropoda melanoleuca]
Length = 1119
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 105/241 (43%), Gaps = 40/241 (16%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA--- 368
K LL GPPG+GKTT A + + GY VE+NASD RS ++++ + + + S+
Sbjct: 644 KAALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKNSLKEIVAESLNNTSITGFYS 703
Query: 369 -----DSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISK 422
S L++DE+DG G + +G ++ ++ ++ + KI
Sbjct: 704 NGAAHVSTKHALIMDEVDGMAGNEDRGGIQELIGLI-----------------KHTKI-- 744
Query: 423 KKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKT 482
P+IC+CND P +RSL F +P V ++ + I E +K
Sbjct: 745 -----------PIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAMMSIAFKEGLKI 793
Query: 483 SSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV-VGRKDMSRSAFDIWKEI 541
A+ + DIR L+ L + + L + +KD+ FD+ +++
Sbjct: 794 PPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRAKKDIKLGPFDVARKV 853
Query: 542 F 542
F
Sbjct: 854 F 854
>gi|170290624|ref|YP_001737440.1| DNA replication ATPase HolB large subunit [Candidatus Korarchaeum
cryptofilum OPF8]
gi|170174704|gb|ACB07757.1| ATPase involved in DNA replication HolB, large subunit [Candidatus
Korarchaeum cryptofilum OPF8]
Length = 382
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 164/390 (42%), Gaps = 63/390 (16%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSR 371
K LL+ GPPG GKT+ AH A Y +EVNASD R + ++ I++ S+++ R
Sbjct: 8 KPLLIVGPPGTGKTSAAHAIANELNYDAIEVNASDLRDRTHLQY-IVESSGAVSLLSGKR 66
Query: 372 PKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASL 431
+ +++DEID G+G ++ +++S KG
Sbjct: 67 -RLIILDEIDALPGEGHAIASLVKELIS------------------------KGI----- 96
Query: 432 LRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLA 491
P++ ND Y L +R ++ + F + VVS LK IC E + L +A
Sbjct: 97 --PIVMTANDPYERHLYEIRNLSMMVKFSRVRWQSVVSVLKDICRKEGLSVPEEVLNKIA 154
Query: 492 EYTECDIRSCLNTLQFLDK-KKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRL 550
+ + D+R+ +N L+ L K E+L IG + G++D+ F + IF
Sbjct: 155 KSCQGDLRAAINDLEGLVKGSAELLKY--IGEK-YGKRDIETDVFKVLSSIFYG------ 205
Query: 551 RNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGN 610
N + S ++ D D++F + EN+ + + K + L
Sbjct: 206 ----------ENCYPAYLSSLNLDMDPDMLFRWVEENVAHVYSGRSL----AKAYEMLSL 251
Query: 611 SDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLE--WPKSYQRYRNAFMEKMDI 668
+D+M I+RT Y +T ++ +P E P S + +A E
Sbjct: 252 ADIMRGRIIRTNNWRFLAYYTQF-MTFGVCAAKEGRPEGEKLRPPSLIKQLSATKELRSK 310
Query: 669 FKSWHSKIPPYISRHLSTESLVEDSISPLL 698
K + KI I H+ST ++V + PLL
Sbjct: 311 TKEFLEKIAKRI--HVST-AVVRMELIPLL 337
>gi|453089734|gb|EMF17774.1| DNA replication factor C, large subunit [Mycosphaerella populorum
SO2202]
Length = 1100
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 88/205 (42%), Gaps = 41/205 (20%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA--- 368
+ +++ GPPG+GKTT AH+ AK GY +VE NASD RS +E + + S++
Sbjct: 559 RAVMIHGPPGIGKTTAAHLVAKLEGYDIVESNASDTRSKKLVETGLKGTLAATSLLGYFA 618
Query: 369 -------DSRPK-CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
DS K L++DE+DG +G V + +
Sbjct: 619 QGEEEVKDSNKKLVLIMDEVDGMSAGDRGGVGALAAV----------------------- 655
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
CKK + P+I ICND P ++ F +P+ ++ R+ I E +
Sbjct: 656 -----CKKTQV--PMILICNDRKLPKMKPFDFCTFDLPFRRPTTEQIRGRIMTITFREKL 708
Query: 481 KTSSIALTTLAEYTECDIRSCLNTL 505
K + L E + DIR +N +
Sbjct: 709 KLPPNVVNALIEGSGADIRQVINMV 733
>gi|444323840|ref|XP_004182560.1| hypothetical protein TBLA_0J00410 [Tetrapisispora blattae CBS 6284]
gi|387515608|emb|CCH63041.1| hypothetical protein TBLA_0J00410 [Tetrapisispora blattae CBS 6284]
Length = 904
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 94/219 (42%), Gaps = 44/219 (20%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM---- 367
+ +L GPPG+GKTT AH+ AK GY ++E NASD RS S + + + + SV+
Sbjct: 391 RAAMLHGPPGIGKTTAAHLVAKDLGYDILEQNASDVRSKSLLNAGVKNALDNMSVVGFFK 450
Query: 368 ----------ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
+++ +++DE+DG G +G V + +
Sbjct: 451 THENKDHDITGNAKKFLIIMDEVDGMSGGDRGGVGQLAQF-------------------- 490
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
C+K P+I ICN+ P +R ++ F +P + + SRL I
Sbjct: 491 --------CRKTET--PMILICNERNLPKMRPFDRVCLDLPFRRPDANSIKSRLMTIAVR 540
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILN 516
E K + L + T DIR +N L + K + +N
Sbjct: 541 EGFKLDPNIIDRLVQATRADIRQIINLLSTVSKTTKSIN 579
>gi|6324791|ref|NP_014860.1| replication factor C subunit 1 [Saccharomyces cerevisiae S288c]
gi|584899|sp|P38630.1|RFC1_YEAST RecName: Full=Replication factor C subunit 1; Short=Replication
factor C1; AltName: Full=Activator 1 95 kDa subunit;
AltName: Full=Cell division control protein 44
gi|437274|gb|AAC48916.1| Cdc44p [Saccharomyces cerevisiae]
gi|841462|gb|AAC49060.1| Rfc1p [Saccharomyces cerevisiae]
gi|1050769|emb|CAA63180.1| CDC44 [Saccharomyces cerevisiae]
gi|1420505|emb|CAA99434.1| RFC1 [Saccharomyces cerevisiae]
gi|256269587|gb|EEU04869.1| Rfc1p [Saccharomyces cerevisiae JAY291]
gi|259149697|emb|CAY86501.1| Rfc1p [Saccharomyces cerevisiae EC1118]
gi|285815096|tpg|DAA10989.1| TPA: replication factor C subunit 1 [Saccharomyces cerevisiae
S288c]
gi|392296545|gb|EIW07647.1| Rfc1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 861
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 140/366 (38%), Gaps = 111/366 (30%)
Query: 153 NSLTSEPIDVLLQKVEQEAFNKALNSSSEGQSDRSLPEKPVVHEQ--LWVDKYAPNSFTE 210
+++ ++ ++L++K E+ + A S G +R VV E+ LW KYAP + +
Sbjct: 254 HNIATKEAELLVKKEEERSKKLAATRVSGGHLERD----NVVREEDKLWTVKYAPTNLQQ 309
Query: 211 LLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNR 270
+ ++ + ++ WL W +N K+N K+
Sbjct: 310 VCGNKGSVMKLKNWLANW---------------------------ENSKKNSFKHAGKD- 341
Query: 271 GNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHV 330
+G FR + +L GPPG+GKTT AH+
Sbjct: 342 ----GSGVFRAA--------------------------------MLYGPPGIGKTTAAHL 365
Query: 331 AAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-----------DSRPKCLVIDE 379
A+ GY ++E NASD RS + + + + + SV+ + + +++DE
Sbjct: 366 VAQELGYDILEQNASDVRSKTLLNAGVKNALDNMSVVGYFKHNEEAQNLNGKHFVIIMDE 425
Query: 380 IDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICIC 439
+DG G +G V + + C+K S P+I IC
Sbjct: 426 VDGMSGGDRGGVGQLAQF----------------------------CRKTST--PLILIC 455
Query: 440 NDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIR 499
N+ P +R ++ F +P + + SRL I E K + L + T DIR
Sbjct: 456 NERNLPKMRPFDRVCLDIQFRRPDANSIKSRLMTIAIREKFKLDPNVIDRLIQTTRGDIR 515
Query: 500 SCLNTL 505
+N L
Sbjct: 516 QVINLL 521
>gi|448346404|ref|ZP_21535289.1| replication factor C large subunit [Natrinema altunense JCM 12890]
gi|445632607|gb|ELY85818.1| replication factor C large subunit [Natrinema altunense JCM 12890]
Length = 499
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 111/237 (46%), Gaps = 36/237 (15%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-D 369
+K +++ G PG+GKT+ AH A G+ V+E+NASD R + IE + + ++ +
Sbjct: 37 RKSVIVHGSPGVGKTSAAHALAADMGWPVMELNASDSRGADVIEKIAGEAAKSGTLTGGE 96
Query: 370 SRPKCLVIDEIDGALGDGK-GAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKK 428
+ + +V+DE D G+ G + ++V K
Sbjct: 97 AGRRLVVLDEADNFHGNADYGGSREVTRVV----------------------------KD 128
Query: 429 ASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALT 488
A+ +P++ + N+ Y + +SLR + F S +V L+ IC E ++ AL
Sbjct: 129 AN--QPIVLVANEFYEMS-KSLRNACETIEFRDVSKRSIVPVLRDICRREGVEFEEGALE 185
Query: 489 TLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKR 545
+AE T D+RS +N LQ + ++ E L V D+ V +D + FD E+ +++
Sbjct: 186 KIAESTSGDLRSAVNDLQAVAEETERLTVDDV---VTSERDTTEGIFDFLDELIKEK 239
>gi|448353083|ref|ZP_21541861.1| replication factor C large subunit [Natrialba hulunbeirensis JCM
10989]
gi|445641150|gb|ELY94233.1| replication factor C large subunit [Natrialba hulunbeirensis JCM
10989]
Length = 514
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 102/228 (44%), Gaps = 38/228 (16%)
Query: 313 VLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRP 372
+++ G PG+GKT+ AH A G+ V+E+NASD R + IE + + ++
Sbjct: 39 AVIVHGSPGVGKTSAAHALANDLGWPVMELNASDSRGADVIERVAGEAAKSGTLTGGESG 98
Query: 373 KCLVI-DEIDGALG--DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKA 429
+ LVI DE D G D G+ EV + SA +
Sbjct: 99 RRLVILDEADNFHGNADYGGSREVTRVVKSANQ--------------------------- 131
Query: 430 SLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTT 489
P++ + N+ Y + +SLR + F S +V L+ IC E ++ AL
Sbjct: 132 ----PMVLVANEFYDMS-QSLRSACETIEFRDVSKRSIVPVLRDICRREDIEFEDEALQK 186
Query: 490 LAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
+AE T D+RS +N LQ + ++ E L V D+ V G +D + FD
Sbjct: 187 IAEDTSGDLRSAVNDLQAVAEEAERLTVDDV---VTGDRDTTEGIFDF 231
>gi|448453326|ref|ZP_21593769.1| replication factor C large subunit [Halorubrum litoreum JCM 13561]
gi|445807646|gb|EMA57729.1| replication factor C large subunit [Halorubrum litoreum JCM 13561]
Length = 503
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 138/332 (41%), Gaps = 68/332 (20%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-- 368
++ ++L G PG+GKT+ AH A G+ VE+NASD R++ IE + N+ +
Sbjct: 37 REAVVLHGSPGVGKTSAAHALANDMGWETVELNASDQRTADVIE-RFAGRAARNATLGGS 95
Query: 369 ---------DSRPKCLVI-DEIDGALGD-GKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
D+ + LVI DE D G+ +G I K+V
Sbjct: 96 AAGGGAAGGDTASRQLVILDEADNIHGNYDRGGASAITKLV------------------- 136
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
K+ G +P++ I ND Y + R LR + F S +V L+ +C
Sbjct: 137 ----KESG-------QPIVLIANDFYDMS-RGLRNATQEIEFRDVSARSIVPVLRDVCRK 184
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
E ++ S AL +AE D+R +N LQ + ++ + V D+ V G +D + F
Sbjct: 185 EGIEFESDALQRIAEGNRGDLRGAINDLQAATQGRDSITVEDV---VTGDRDKALGLFPF 241
Query: 538 WKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPV 597
+ ++ + ++ S+ V + L I N N+L + ++P
Sbjct: 242 LDAVLKEESAE---EALQSAYAVDETPEDLARWIEN-------------NLLDV--YEPA 283
Query: 598 MLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVY 629
+ V+ D L N+D+ + TQ + Y
Sbjct: 284 --EAVRAYDFLANADVWLGRVRATQNYSYWRY 313
>gi|123479162|ref|XP_001322740.1| differentiation specific element binding protein [Trichomonas
vaginalis G3]
gi|121905592|gb|EAY10517.1| differentiation specific element binding protein, putative
[Trichomonas vaginalis G3]
Length = 694
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 42/207 (20%)
Query: 310 EQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIEN---------KILDV 360
++K +L+ GPPG+GKT+ A + AK GYHVVE NASD R+ + IE+ +
Sbjct: 255 DKKAVLISGPPGIGKTSTALLLAKSRGYHVVEYNASDVRNKAAIEDIAKTLFNGKTLYSF 314
Query: 361 VQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
Q N+ +++ ++ DEIDG +G V+ + + +
Sbjct: 315 TQQNT---NNKQHAIIFDEIDGMSTGDRGGVQALAQFI---------------------- 349
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
+K++ P+ CICND + L+ + + F P ++ R+ I E +
Sbjct: 350 ------EKSTF--PIFCICNDRQSEKLKPILKYVLDIQFSAPDKKEMIQRVFEISKQEGI 401
Query: 481 KTSSIALTTLAEYTECDIRSCLNTLQF 507
K L + + D+RS LN LQ
Sbjct: 402 KIDRKNLFAAIDKSGGDMRSALNALQL 428
>gi|448317665|ref|ZP_21507213.1| replication factor C large subunit [Natronococcus jeotgali DSM
18795]
gi|445602591|gb|ELY56565.1| replication factor C large subunit [Natronococcus jeotgali DSM
18795]
Length = 486
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 104/230 (45%), Gaps = 38/230 (16%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS 370
+K +++ G PG+GKT+ AH A + V+E+NASD R + IE + + ++ A
Sbjct: 37 RKAVIVHGSPGVGKTSAAHALANDMDWPVMELNASDSRGADVIERVAGEASKSGTLTAGG 96
Query: 371 RPKCLVI-DEIDGALG--DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCK 427
+ LVI DE D G D G+ EV + SA +
Sbjct: 97 SGRRLVILDEADNFHGNADYGGSREVTRVVKSANQ------------------------- 131
Query: 428 KASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIAL 487
P++ + N+ Y + +SLR + F S +V L+ IC E ++ AL
Sbjct: 132 ------PIVLVANEFYDMS-QSLRDACETIEFRDVSKRSIVPVLRDICRREGVEFEEEAL 184
Query: 488 TTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
+AE T D+RS +N LQ + ++ E L V D+ V G +D + FD
Sbjct: 185 EKIAEDTSGDLRSAVNDLQAVAEEAERLTVEDV---VTGERDTTEGIFDF 231
>gi|448491336|ref|ZP_21608277.1| replication factor C large subunit [Halorubrum californiensis DSM
19288]
gi|445693107|gb|ELZ45269.1| replication factor C large subunit [Halorubrum californiensis DSM
19288]
Length = 506
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 138/332 (41%), Gaps = 68/332 (20%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-- 368
++ ++L G PG+GKT+ AH A G+ VE+NASD R++ IE + N+ +
Sbjct: 37 REAVVLHGSPGVGKTSAAHALANDMGWETVELNASDQRTADVIE-RFAGRAARNATLGGS 95
Query: 369 ---------DSRPKCLVI-DEIDGALGD-GKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
D+ + LVI DE D G+ +G I ++V
Sbjct: 96 AAGGGAAGGDTASRQLVILDEADNIHGNYDRGGASAITELV------------------- 136
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
K+ G +P++ I ND Y + R LR + F S +V L+ +C
Sbjct: 137 ----KESG-------QPIVLIANDYYDMS-RGLRNATQEIEFRDVSARSIVPVLRDVCRK 184
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
E ++ S AL +AE D+R +N LQ + ++ + V D+ V G +D + F
Sbjct: 185 EGIEFESDALQRIAEGNRGDLRGAINDLQAATQGRDSITVGDV---VTGDRDKALGLFPF 241
Query: 538 WKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPV 597
+ ++ + ++ S+ V D L + N N+L + ++P
Sbjct: 242 LDAVLKEESAE---EALQSAYAVDETPDDLMRWLEN-------------NVLDV--YEPA 283
Query: 598 MLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVY 629
+ V+ D L N+D+ + TQ + Y
Sbjct: 284 --EAVRAYDFLANADVWLGRVRATQNYSYWRY 313
>gi|190407527|gb|EDV10794.1| replication factor C subunit 1 [Saccharomyces cerevisiae RM11-1a]
Length = 861
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 140/366 (38%), Gaps = 111/366 (30%)
Query: 153 NSLTSEPIDVLLQKVEQEAFNKALNSSSEGQSDRSLPEKPVVHEQ--LWVDKYAPNSFTE 210
+++ ++ ++L++K E+ + A S G +R VV E+ LW KYAP + +
Sbjct: 254 HNIATKEAELLVKKEEERSKKLAATRVSGGHLERD----NVVREEDKLWTVKYAPTNLQQ 309
Query: 211 LLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNKKQNDSSFTRKNR 270
+ ++ + ++ WL W +N K+N K+
Sbjct: 310 VCGNKGSVMKLKNWLANW---------------------------ENSKKNSFKHAGKD- 341
Query: 271 GNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHV 330
+G FR + +L GPPG+GKTT AH+
Sbjct: 342 ----GSGVFRAA--------------------------------MLYGPPGIGKTTAAHL 365
Query: 331 AAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-----------DSRPKCLVIDE 379
A+ GY ++E NASD RS + + + + + SV+ + + +++DE
Sbjct: 366 VAQELGYDILEQNASDVRSKTLLNAGVKNALDNMSVVGYFKHNEEAQNLNGKHFVIIMDE 425
Query: 380 IDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICIC 439
+DG G +G V + + C+K S P+I IC
Sbjct: 426 VDGMSGGDRGGVGQLAQF----------------------------CRKTST--PLILIC 455
Query: 440 NDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIR 499
N+ P +R ++ F +P + + SRL I E K + L + T DIR
Sbjct: 456 NERNLPKMRPFDRVCLDIQFRRPDANSIKSRLMTIAIREKFKLDPNVIDRLIQTTRGDIR 515
Query: 500 SCLNTL 505
+N L
Sbjct: 516 QVINLL 521
>gi|326437790|gb|EGD83360.1| hypothetical protein PTSG_03969 [Salpingoeca sp. ATCC 50818]
Length = 1046
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 107/237 (45%), Gaps = 53/237 (22%)
Query: 290 SNSKGIQ---DSWH--------KKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYH 338
SN+K ++ +SWH K T++ +++ LL GPPG+GKTT A + + CGY
Sbjct: 498 SNAKKLKAWLESWHQHLPRKNNKPTKNDTGFDKRCALLVGPPGIGKTTTAKLVCEACGYE 557
Query: 339 VVEVNASDDRSSSTIENKILDVVQMNSVMAD-----SRPK----CLVIDEIDGALG-DGK 388
+E+NASD RS +E +I + + N M ++P+ ++ DE+DG G + +
Sbjct: 558 PIELNASDARSKKLLEAQIGPLTR-NCTMTQFYGTATKPRATKVAVIFDEVDGMAGNEDR 616
Query: 389 GAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALR 448
G V I+K++ + P+ICI ND+ LR
Sbjct: 617 GGVGEIMKLIKTTK------------------------------MPIICIANDV-PQKLR 645
Query: 449 SLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
LR ++ F + ++ S + + E + + I L + E DIR LN +
Sbjct: 646 RLRDVSFHLPFRKLQTKQIRSAMMSVAFKEGLSLNPIVLDRIIEGANGDIRQILNNM 702
>gi|349581374|dbj|GAA26532.1| K7_Rfc1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 860
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 96/230 (41%), Gaps = 46/230 (20%)
Query: 287 YENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASD 346
+ENS G K G + +L GPPG+GKTT AH+ A+ GY ++E NASD
Sbjct: 327 WENSKKNGF-----KHAGKDGSGVFRAAMLYGPPGIGKTTAAHLVAQELGYDILEQNASD 381
Query: 347 DRSSSTIENKILDVVQMNSVMA-----------DSRPKCLVIDEIDGALGDGKGAVEVIL 395
RS + + + + + SV+ + + +++DE+DG G +G V +
Sbjct: 382 VRSKTLLNAGVKNALDNMSVVGYFKHNEEAQNLNGKHFVIIMDEVDGMSGGDRGGVGQLA 441
Query: 396 KMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAK 455
+ C+K S P+I ICN+ P +R ++
Sbjct: 442 QF----------------------------CRKTST--PLILICNERNLPKMRPFDRVCL 471
Query: 456 VHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
F +P + + SRL I E K + L + T DIR +N L
Sbjct: 472 DIQFRRPDANSIKSRLMTIAIREKFKLDPNVIDRLIQTTRGDIRQVINLL 521
>gi|401623557|gb|EJS41653.1| rfc1p [Saccharomyces arboricola H-6]
Length = 861
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 96/230 (41%), Gaps = 46/230 (20%)
Query: 287 YENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASD 346
+EN+ G K+ G + +L GPPG+GKTT AH+ AK GY ++E NASD
Sbjct: 327 WENAKRDGF-----KRAGKDGSGVFRAAMLYGPPGIGKTTTAHLVAKELGYDILEQNASD 381
Query: 347 DRSSSTIENKILDVVQMNSVMA-----------DSRPKCLVIDEIDGALGDGKGAVEVIL 395
RS + + + + + SV+ + + +++DE+DG G +G V +
Sbjct: 382 VRSKTLLNAGVKNALNNMSVVGYFKHSEEPQNLNGKHFVIIMDEVDGMSGGDRGGVGQLA 441
Query: 396 KMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAK 455
+ C+K S P+I ICN+ P +R +
Sbjct: 442 QF----------------------------CRKTST--PLILICNERNLPKMRPFDRTCL 471
Query: 456 VHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
F +P + + SRL I E K + L + T DIR +N L
Sbjct: 472 DIQFRRPDANSIKSRLMTIAIREKFKLDPNVIDRLIQTTRGDIRQVINLL 521
>gi|154150617|ref|YP_001404235.1| replication factor C large subunit [Methanoregula boonei 6A8]
gi|166225153|sp|A7I781.1|RFCL_METB6 RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|153999169|gb|ABS55592.1| AAA ATPase, central domain protein [Methanoregula boonei 6A8]
Length = 481
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 107/234 (45%), Gaps = 36/234 (15%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSR 371
K LLL G PG+GKT+ + A+ + V+E+NASD R+++ IE +I + + S
Sbjct: 37 KPLLLYGKPGIGKTSSVYALARDMNWDVIELNASDQRTAAVIE-RIAGAGSTTASLTGSA 95
Query: 372 PKCLVIDEIDGALGDG-KGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKAS 430
K +++DE D G +G + IL+ + R+
Sbjct: 96 RKLIIMDEADNLQGTADRGGAKAILECIKNARQ--------------------------- 128
Query: 431 LLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTL 490
P++ I NDLY A + V P+ S + RLK+IC++E + S A+ +
Sbjct: 129 ---PIVLIANDLYGLAAELRLRCEPVQFRALPARS-IAPRLKYICSSEKIACSESAVHEI 184
Query: 491 AEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQK 544
AE E D+RS +N L ++ L+ ++ + +KD S F + +F K
Sbjct: 185 AESAEGDMRSAVNMLYASAIGRQSLDGKNVHTS---QKDERVSIFSLVTAVFGK 235
>gi|448565679|ref|ZP_21636546.1| replication factor C large subunit [Haloferax prahovense DSM 18310]
gi|445715423|gb|ELZ67179.1| replication factor C large subunit [Haloferax prahovense DSM 18310]
Length = 487
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 119/266 (44%), Gaps = 45/266 (16%)
Query: 289 NSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDR 348
N+ ++ W K T ++ +++ G PG+GKT+ AH A G+ VE+NASD R
Sbjct: 19 NNKARDALAEWAK----TWDDHREAVVVHGSPGIGKTSAAHALAADMGWETVELNASDQR 74
Query: 349 SSSTIENKILDVVQMNSVMADSRP-----KCLVIDEIDGALGD-GKGAVEVILKMVSAER 402
+ IE + N+ +A S + +++DE D G+ +G + ++V
Sbjct: 75 TGDVIE-RFAGRAAKNATLAGSSAGTSTRQLVILDEADNIHGNYDRGGASAVTRLV---- 129
Query: 403 KSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQP 462
KS++ +P++ I N+ Y + R LR + F
Sbjct: 130 KSSS--------------------------QPIVLIANEFYDMS-RGLRNACQEIEFRDV 162
Query: 463 SVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGS 522
S +V L+ IC E ++ S AL +AE D+RS +N LQ + + +E + D+
Sbjct: 163 SARSIVPVLRDICRKEGLEFESDALDRIAEMNSGDLRSAVNDLQAIAEGREKITEEDV-- 220
Query: 523 QVVGRKDMSRSAFDIWKEIFQKRKTK 548
V+G +D S F+ + +++ +
Sbjct: 221 -VMGDRDRSVGLFEFLDAVLKEKSAQ 245
>gi|328770979|gb|EGF81020.1| hypothetical protein BATDEDRAFT_653 [Batrachochytrium dendrobatidis
JAM81]
Length = 696
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 95/213 (44%), Gaps = 50/213 (23%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVV---------- 361
+ LL G PGLGKTT AH+ A+ + VVE NASD RS ++ V
Sbjct: 181 RACLLSGSPGLGKTTSAHLVARLEDFDVVEFNASDVRSKKALDESTGTVSIASLFGTASS 240
Query: 362 QMNSVMADS--------RPKCLVIDEIDG-ALGDGKGAVEVILKMVSAERKSNTAKENVA 412
++ V+ S R + L++DE+DG + GD G+ E+I ++
Sbjct: 241 SLSKVLGKSAAPVNHKKRGRVLIMDEVDGMSAGDRGGSAELI---------------SII 285
Query: 413 KEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLK 472
K+ KI P+ICICND +P +RSL F +P + +R++
Sbjct: 286 KQ---TKI-------------PIICICNDRSSPKIRSLANHCFDLRFRRPDARMISARVE 329
Query: 473 HICNNESMKTSSIALTTLAEYTECDIRSCLNTL 505
IC E + S + L + T DIR LN L
Sbjct: 330 MICKKEGLDISPNVIAELVDSTSADIRQILNIL 362
Score = 42.7 bits (99), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 69/156 (44%), Gaps = 41/156 (26%)
Query: 91 PPQARDDARVEVEEKFVSRYASEIDGDCLPVTAPSGGDRVYVKISSSGVEERVKKLDVRA 150
P +R+DA V RY + V APS YV + E ++KK VR
Sbjct: 33 PSFSREDA-----TDLVKRYGGRV------VGAPSS-KTSYVVVGEDPGESKLKK--VR- 77
Query: 151 HSNSLTSEPIDVLLQKVEQEAFNKALNSSSEGQSDRSL----PEKPVVHEQ--------- 197
D+ L+ +++++F ++S+ G S ++ P PV Q
Sbjct: 78 ----------DLKLKVLDEDSFVNLISSTFNGASASTVTLASPLLPVHSAQCTTPVLTSS 127
Query: 198 ---LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDS 230
LWVDKY P S++E++ ++ ++ WLK W+S
Sbjct: 128 MTPLWVDKYKPISYSEVIGNKGLIEKLSKWLKNWES 163
>gi|123412383|ref|XP_001304051.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121885476|gb|EAX91121.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 423
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 95/182 (52%), Gaps = 17/182 (9%)
Query: 433 RPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAE 492
RPV+ I ND YA +L+++R IA P+ ++ R+++IC NE + S+ A+ +AE
Sbjct: 46 RPVVIIVNDGYAQSLKNIRSIATFIKLPPPNSTQFKERIRYICKNEEIDISTQAINEVAE 105
Query: 493 YTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRN 552
++ DIR+ LNT+ FL ++ I + + VG K+ S + FD+W +F K
Sbjct: 106 ISKYDIRTALNTISFLRARQPI-SADTVHLLPVGLKNSSLTPFDVWTTLFTASK------ 158
Query: 553 SVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSD 612
S + +NE + G+ +I GI EN+ ++ DP + V+ D L +D
Sbjct: 159 ---SFKDCANEVEIF-------GNTRLISTGILENLENIRNADPTRKRLVEMFDNLCYAD 208
Query: 613 LM 614
++
Sbjct: 209 VL 210
>gi|288932435|ref|YP_003436495.1| ATPase AAA [Ferroglobus placidus DSM 10642]
gi|288894683|gb|ADC66220.1| AAA ATPase central domain protein [Ferroglobus placidus DSM 10642]
Length = 506
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 116/237 (48%), Gaps = 30/237 (12%)
Query: 310 EQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMAD 369
+QK LL GPPG+GKT+LA A G+ VVE+NASD R+ S I +I+ N ++D
Sbjct: 37 KQKPLLFAGPPGVGKTSLALALANTYGWEVVELNASDQRNWSVI-YRIVGEGAFNETLSD 95
Query: 370 SRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTA-KENVAKEDQPEKISKKKGCKK 428
GD + E LK++ + N + KE+ E KI K+ +
Sbjct: 96 E--------------GDFLSSREGKLKLIVLDEVDNISKKEDFGGESALIKILKRNPPQ- 140
Query: 429 ASLLRPVICICNDLY--APALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIA 486
P+I I N+ Y +P LR+L + F + + +VV L+ I E ++ A
Sbjct: 141 -----PMILIANEPYNLSPELRNLVTMVN---FRRLTRDQVVKVLERIAKLEGIEIDKKA 192
Query: 487 LTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQ 543
L +A+ D+R+ +N LQ + + ++++ D+ +V ++ F + ++IF+
Sbjct: 193 LYAIADNAGGDLRAAINDLQAVAEGRKVVKAEDV---IVAKRTQETDVFKVMQKIFK 246
>gi|433590863|ref|YP_007280359.1| AAA ATPase [Natrinema pellirubrum DSM 15624]
gi|448331730|ref|ZP_21520981.1| replication factor C large subunit [Natrinema pellirubrum DSM
15624]
gi|433305643|gb|AGB31455.1| AAA ATPase [Natrinema pellirubrum DSM 15624]
gi|445628689|gb|ELY81992.1| replication factor C large subunit [Natrinema pellirubrum DSM
15624]
Length = 498
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 108/234 (46%), Gaps = 36/234 (15%)
Query: 314 LLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPK 373
+++ G PG+GKT+ AH A G+ V+E+NASD R + IE + + ++ A +
Sbjct: 40 VIVHGSPGVGKTSAAHALANDMGWPVMELNASDSRGADVIEKIAGEASKSGTLTAGESGR 99
Query: 374 CLVI-DEIDGALGDGK-GAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASL 431
LVI DE D G+ G + ++V K A+
Sbjct: 100 RLVILDEADNFHGNADYGGSREVTRVV----------------------------KDAN- 130
Query: 432 LRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLA 491
+P++ + N+ Y + +SLR + F S +V L+ +C E ++ AL +A
Sbjct: 131 -QPIVLVANEFYEMS-QSLRNACETIEFRDVSKRSIVPVLRDVCRREGIEFEEEALEKIA 188
Query: 492 EYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKR 545
E T D+RS +N LQ + ++ E L V D+ V +D + FD E+ +++
Sbjct: 189 ESTSGDLRSAVNDLQAVAEEAERLTVDDV---VTSERDTTEGIFDFLDELIKEK 239
>gi|448474345|ref|ZP_21602204.1| replication factor C large subunit [Halorubrum aidingense JCM
13560]
gi|445817652|gb|EMA67521.1| replication factor C large subunit [Halorubrum aidingense JCM
13560]
Length = 491
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 138/332 (41%), Gaps = 68/332 (20%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-- 368
++ ++L G PG+GKT+ AH A G+ VE+NASD R++ IE + N+ +
Sbjct: 37 REAVVLHGSPGVGKTSAAHALANDMGWETVELNASDQRTADVIE-RFAGRAARNATLGGS 95
Query: 369 ---------DSRPKCLVI-DEIDGALGD-GKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
D+ + LVI DE D G+ +G I ++V
Sbjct: 96 AAGGGAAGGDTASRQLVILDEADNIHGNYDRGGASAITELV------------------- 136
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
K+ G +P++ I N+ Y + R LR + F S +V L+ +C
Sbjct: 137 ----KESG-------QPIVLIANEFYDMS-RGLRNATQEIEFRDVSARSIVPVLRDVCRK 184
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
E ++ AL +AE D+R +N LQ + ++ + V D+ V G +D + F
Sbjct: 185 EGIEFEPDALQRIAERNRGDLRGAINDLQAATEGRDSIAVEDV---VTGDRDKALGLFPF 241
Query: 538 WKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPV 597
+ ++ + ++ S+ V D L + N N+L + +DP
Sbjct: 242 LDAVLKEESAE---EALQSAYAVDETPDDLTKWVEN-------------NVLDV--YDP- 282
Query: 598 MLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVY 629
++ V+ D L N+D+ + TQ + Y
Sbjct: 283 -MEAVRAYDFLANADVWLGRVRATQNYSYWRY 313
>gi|448385340|ref|ZP_21563846.1| replication factor C large subunit [Haloterrigena thermotolerans
DSM 11522]
gi|445656835|gb|ELZ09667.1| replication factor C large subunit [Haloterrigena thermotolerans
DSM 11522]
Length = 496
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 109/237 (45%), Gaps = 36/237 (15%)
Query: 314 LLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPK 373
+++ G PG+GKT+ AH A G+ V+E+NASD R + IE + + ++ A +
Sbjct: 40 VIVHGSPGVGKTSAAHALANDMGWPVMELNASDSRGADVIEKIAGEASKSGTLTAGESGR 99
Query: 374 CLVI-DEIDGALGDGK-GAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASL 431
LVI DE D G+ G + ++V K A+
Sbjct: 100 RLVILDEADNFHGNADYGGSREVTRVV----------------------------KDAN- 130
Query: 432 LRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLA 491
+P++ I N+ Y + +SLR + F S +V L+ +C E ++ AL +A
Sbjct: 131 -QPIVLIANEFYDMS-QSLRNACETIEFRDVSKRSIVPVLRDVCRREGIEFEEEALEKIA 188
Query: 492 EYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTK 548
E T D+RS +N LQ + ++ E L V D+ V +D + FD E+ +++ +
Sbjct: 189 ESTSGDLRSAVNDLQAVAEEAERLTVDDV---VTSERDTTEGIFDFLDELIKEKDAE 242
>gi|448339295|ref|ZP_21528323.1| replication factor C large subunit [Natrinema pallidum DSM 3751]
gi|445620524|gb|ELY74020.1| replication factor C large subunit [Natrinema pallidum DSM 3751]
Length = 500
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 111/237 (46%), Gaps = 36/237 (15%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-D 369
+K +++ G PG+GKT+ AH A G+ V+E+NASD R + IE + + ++ +
Sbjct: 37 RKSVIVHGSPGVGKTSAAHALATDMGWPVMELNASDSRGADVIEKIAGEAAKSGTLTGGE 96
Query: 370 SRPKCLVIDEIDGALGDGK-GAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKK 428
+ + +V+DE D G+ G + ++V K
Sbjct: 97 AGRRLVVLDEADNFHGNADYGGSREVTRVV----------------------------KD 128
Query: 429 ASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALT 488
A+ +P++ + N+ Y + +SLR + F S +V L+ IC E ++ AL
Sbjct: 129 AN--QPIVLVANEFYDMS-KSLRNACETIEFRDVSKRSIVPVLRDICRREGVEFEEGALE 185
Query: 489 TLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKR 545
+AE T D+RS +N LQ + ++ E L V D+ V +D + FD E+ +++
Sbjct: 186 KIAESTSGDLRSAVNDLQAVAEEAERLTVDDV---VTSERDTTEGIFDFLDELIKEK 239
>gi|392592440|gb|EIW81766.1| DNA replication factor C, large subunit [Coniophora puteana
RWD-64-598 SS2]
Length = 999
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 87/207 (42%), Gaps = 44/207 (21%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIE------NKILD------ 359
+ +L+ GPPG+GKTT AH+ A+ G+ +E+NASD RS +E N LD
Sbjct: 456 RAVLITGPPGIGKTTSAHMCARLEGFTPIEMNASDVRSKRMVESGLNINNTSLDGWMGGP 515
Query: 360 -VVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPE 418
+ V R CL++DE+DG +G V + ++ R
Sbjct: 516 EATNASGVAITDR-SCLIMDEVDGMSAGDRGGVGALNALIKKSR---------------- 558
Query: 419 KISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNE 478
P+ICI ND A L+ L F +P + + SR+ I E
Sbjct: 559 --------------IPIICIANDRGAQKLKPLIATTFNLPFRKPDATAIRSRMMSIAYKE 604
Query: 479 SMKTSSIALTTLAEYTECDIRSCLNTL 505
M+ + L + ++ DIR LN L
Sbjct: 605 KMQIPPNVVDALVQGSQSDIRQVLNML 631
>gi|340509271|gb|EGR34821.1| hypothetical protein IMG5_000480 [Ichthyophthirius multifiliis]
Length = 330
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 105/260 (40%), Gaps = 91/260 (35%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
LW +KYAP S +++ ++++ ++ WLK W+ V L + T +Q
Sbjct: 30 LWTEKYAPESVEQIIGNQKSILSIMEWLKNWEDTV---------------LHKKPTQNQT 74
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPP---EQKVL 314
KK Y+ N +S+ PP +
Sbjct: 75 KK--------------------------PYQMYN------------KSSVPPPNPSARAC 96
Query: 315 LLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMN----SVMADS 370
LL GPPG+GKTT + GY ++E NASD R+ +E ++ D ++ N S
Sbjct: 97 LLSGPPGVGKTTSIRLITAFMGYELLEWNASDVRNKKKVE-QLFDELKSNTQVLSFSGKM 155
Query: 371 RPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKAS 430
+ +++DEIDG G +G ++ I+K++ E KS
Sbjct: 156 KKVAVLMDEIDGMSGGDRGGIQAIIKLIK-ESKS-------------------------- 188
Query: 431 LLRPVICICNDLYAPALRSL 450
P+ CICND P +RSL
Sbjct: 189 ---PIFCICNDRMHPKIRSL 205
>gi|288560385|ref|YP_003423871.1| replication factor C large subunit RfcL [Methanobrevibacter
ruminantium M1]
gi|288543095|gb|ADC46979.1| replication factor C large subunit RfcL [Methanobrevibacter
ruminantium M1]
Length = 530
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 138/311 (44%), Gaps = 59/311 (18%)
Query: 289 NSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDR 348
N+ K + + W + + P QK LLL GP G GKTT+AH+ A ++ E+NASD R
Sbjct: 18 NNKQKKVIEDWLQSWQDGNP--QKPLLLIGPAGTGKTTIAHIIANEFSEYI-ELNASDKR 74
Query: 349 SSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTA 407
S + + I + S+ +++ K +++DE+DG G + +G + K++ +
Sbjct: 75 SQDVLMSTIGESATTKSLFGENK-KLIIMDEVDGIHGTNDRGGTSALNKIIKNSK----- 128
Query: 408 KENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLR---QIAKVHVFIQPSV 464
+P++ + ND Y+ L +++ Q+ K+ P++
Sbjct: 129 -------------------------QPIVMMANDFYSNKLTTIKKNAQVIKMDKIRAPTI 163
Query: 465 SRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV 524
++ + + + NE ++ L L++ + D+RS +NTLQ L V
Sbjct: 164 NKFLRDV--VLKNEGIEVDPDVLMKLSKRSSGDLRSAINTLQAL---------------V 206
Query: 525 VGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGI 584
+++ D QK T + ++V+ +N + SL N D ++ + I
Sbjct: 207 ENGGELTEETLDT---TGQKDNTATVIDTVTRVLKSTNAINVKRSLRENNEDPTLVMEYI 263
Query: 585 HENILQLQYHD 595
ENI + +Y D
Sbjct: 264 AENIPR-EYED 273
>gi|448583744|ref|ZP_21646967.1| replication factor C large subunit [Haloferax gibbonsii ATCC 33959]
gi|445729097|gb|ELZ80696.1| replication factor C large subunit [Haloferax gibbonsii ATCC 33959]
Length = 487
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 118/266 (44%), Gaps = 45/266 (16%)
Query: 289 NSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDR 348
N+ ++ W K T ++ +++ G PG+GKT+ AH A G+ VE+NASD R
Sbjct: 19 NNKARDALAEWAK----TWDDHREAVVVHGSPGIGKTSAAHALAADMGWETVELNASDQR 74
Query: 349 SSSTIENKILDVVQMNSVMADSRP-----KCLVIDEIDGALGD-GKGAVEVILKMVSAER 402
+ IE + N+ +A S + +++DE D G+ +G + ++V
Sbjct: 75 TGDVIE-RFAGRAAKNATLAGSSAGTSTRQLVILDEADNIHGNYDRGGASAVTRLV---- 129
Query: 403 KSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQP 462
KS++ +P++ I N+ Y + R LR + F
Sbjct: 130 KSSS--------------------------QPIVLIANEFYDMS-RGLRNACQEIEFRDV 162
Query: 463 SVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGS 522
S +V L+ IC E + S AL +AE D+RS +N LQ + + +E + D+
Sbjct: 163 SARSIVPVLRDICRKEGLAFESDALDRIAEMNSGDLRSAVNDLQAIAEGREEITEEDV-- 220
Query: 523 QVVGRKDMSRSAFDIWKEIFQKRKTK 548
V+G +D S F+ + +++ +
Sbjct: 221 -VMGDRDRSVGLFEFLDAVLKEKSAQ 245
>gi|448465622|ref|ZP_21598888.1| replication factor C large subunit [Halorubrum kocurii JCM 14978]
gi|445814954|gb|EMA64902.1| replication factor C large subunit [Halorubrum kocurii JCM 14978]
Length = 498
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 137/332 (41%), Gaps = 68/332 (20%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS 370
+ ++L G PG+GKT+ AH A G+ VE+NASD R++ IE + N+ + S
Sbjct: 37 HEAVVLHGSPGVGKTSAAHALANDMGWETVELNASDQRTADVIE-RFAGRAARNATLGGS 95
Query: 371 RP------------KCLVIDEIDGALGD-GKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
+ +++DE D G+ +G I K+V
Sbjct: 96 AAGGGATGGDTASRQLVILDEADNIHGNYDRGGASAITKLV------------------- 136
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
K+ G +P++ I ND Y A R LR + F S +V L+ +C
Sbjct: 137 ----KESG-------QPIVLIANDYYDMA-RGLRNATQEIEFRDVSARSIVPVLRDVCRK 184
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
E ++ S AL +AE D+R +N LQ + ++ + V D+ V G +D + F
Sbjct: 185 EGIEFESDALERIAERNRGDLRGAINDLQAATEGRDSVAVEDV---VTGDRDKALGLFPF 241
Query: 538 WKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPV 597
+ ++ + ++ S+ V D L I N N+L + ++P
Sbjct: 242 LDAVLKEESAE---EALQSAYAVDETPDDLTKWIEN-------------NVLDV--YEP- 282
Query: 598 MLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVY 629
++ V+ D L N+D+ + TQ + Y
Sbjct: 283 -MEAVRAYDFLANADVWLGRVRATQNYSYWRY 313
>gi|448298272|ref|ZP_21488302.1| replication factor C large subunit [Natronorubrum tibetense GA33]
gi|445591813|gb|ELY46010.1| replication factor C large subunit [Natronorubrum tibetense GA33]
Length = 503
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 110/236 (46%), Gaps = 36/236 (15%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS 370
+K +++ G PG+GKT+ AH A G+ V+E+NASD R + IE + + ++ A
Sbjct: 37 RKAVIVHGSPGIGKTSAAHALANDMGWPVMELNASDSRGADVIERVAGEASKSGTLTAGG 96
Query: 371 RPKCLVI-DEIDGALGDGK-GAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKK 428
+ LVI DE D G+ G + ++V K+
Sbjct: 97 AGRRLVIMDEADNFHGNADYGGSREVTRVV----------------------------KE 128
Query: 429 ASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALT 488
A+ +PVI + N+ Y + +SLR + F S +V L+ IC E ++ AL
Sbjct: 129 AN--QPVILVANEFYDMS-KSLRNSCETIEFRDVSKRSIVPVLRDICRREGVEFEEEALE 185
Query: 489 TLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQK 544
++E T D+RS +N LQ + ++ + L V D+ V ++D + FD + ++
Sbjct: 186 KISESTSGDLRSAVNDLQAVAEEADRLTVDDV---VTSQRDRTEGIFDFLDTVIKE 238
>gi|403351956|gb|EJY75481.1| Replication factor C subunit protein, putative [Oxytricha
trifallax]
Length = 1043
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 37/203 (18%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV----- 366
K ++ GPPG+GK++ V AK GY ++E N+SD+R TIEN + D +S+
Sbjct: 564 KACIISGPPGIGKSSTVRVVAKELGYLLIENNSSDNRQKKTIENLLKDSTTSSSINRFQT 623
Query: 367 --MADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKK 424
+ +++DEIDG +G + ++K++S
Sbjct: 624 DQTGHLKRTIILMDEIDGMCFKDRGGMNALIKVIS------------------------- 658
Query: 425 GCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSS 484
+ + P++CI ND A L +L F +PS ++ R++ + +E
Sbjct: 659 -----TTMIPIVCIANDGRARKLSNLLNSCYELRFNKPSSEDIMKRIRVLSQHEKFSIDP 713
Query: 485 IALTTLAEYTECDIRSCLNTLQF 507
AL+ + + DIR LN LQ
Sbjct: 714 NALSRFFDQSGFDIRHILNMLQM 736
>gi|57642154|ref|YP_184632.1| replication factor C large subunit [Thermococcus kodakarensis KOD1]
gi|62287361|sp|Q5JHP1.1|RFCL_PYRKO RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|57160478|dbj|BAD86408.1| replication factor C, large subunit [Thermococcus kodakarensis
KOD1]
Length = 499
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 139/352 (39%), Gaps = 61/352 (17%)
Query: 298 SWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKI 357
+W + PP++K LLL GPPG+GKTT + A G+ V+E+NASD+R+ IE +
Sbjct: 30 AWVEAWLHGNPPKKKALLLAGPPGVGKTTTVYALANEYGFEVIELNASDERTYEKIERYV 89
Query: 358 LDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
M+ + R K + +DE D + GA E I K++ R
Sbjct: 90 QAAYTMD--ILGKRRKLIFLDEADNI--EPSGARE-IAKLIDKARN-------------- 130
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
P+I N Y R +R A++ + + + ++ L I
Sbjct: 131 ----------------PIIMSANH-YWEVPREIRNKAQIVEYKRLTQRDIIKALVRILKR 173
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
E ++ L +A+ D+R+ +N LQ + + ++ +V+ +D +S F
Sbjct: 174 EGLEVPKEVLYEIAKRANGDLRAAVNDLQTV-----VTGGVEDAVEVLAYRDTEKSVFQA 228
Query: 538 WKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPV 597
++F KR + +V + NE + I EN+ + Y
Sbjct: 229 LAQLFATDNAKRAKLAVLGVDMMPNE----------------LLQWIDENVPYVYYRPE- 271
Query: 598 MLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNL 649
+ + L +D+ RT L+ Y + +T V+ I+K
Sbjct: 272 --DIARAYEALSRADIYLGRAQRTGNYGLWKYATDM-MTAGVAVAGIKKKGF 320
>gi|340505502|gb|EGR31822.1| hypothetical protein IMG5_101260 [Ichthyophthirius multifiliis]
Length = 183
Score = 83.2 bits (204), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 64/99 (64%), Gaps = 8/99 (8%)
Query: 313 VLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV------ 366
V+LL GPPG GKTTLA AKHCGY +E+NAS+DR++S + +I + Q ++
Sbjct: 81 VILLAGPPGSGKTTLARNIAKHCGYKTIEINASEDRTASKLIERIQIMTQNETLKFSNQE 140
Query: 367 -MADSRPKCLVIDEIDGAL-GDGKGAVEVILKMVSAERK 403
+ +S+P +++DE+DGAL + GAV+ + K E++
Sbjct: 141 NIENSKPSLIILDEVDGALESESHGAVDYLQKECFLEKE 179
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 167 VEQEAFNKALNSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLK 226
++QE NK ++ + + +K ++QLWVDKY P F ELLS+++ NRE L WLK
Sbjct: 1 MKQEYLNKIVDEIDQNDLEEDQSKK---NQQLWVDKYMPKRFDELLSNDKINREALCWLK 57
Query: 227 QWDSCVF 233
WD +F
Sbjct: 58 SWDPILF 64
>gi|448569391|ref|ZP_21638651.1| replication factor C large subunit [Haloferax lucentense DSM 14919]
gi|448600161|ref|ZP_21655874.1| replication factor C large subunit [Haloferax alexandrinus JCM
10717]
gi|445724524|gb|ELZ76156.1| replication factor C large subunit [Haloferax lucentense DSM 14919]
gi|445735571|gb|ELZ87120.1| replication factor C large subunit [Haloferax alexandrinus JCM
10717]
Length = 486
Score = 83.2 bits (204), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 117/262 (44%), Gaps = 45/262 (17%)
Query: 289 NSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDR 348
N+ ++ W K T ++ +++ G PG+GKT+ AH A G+ VE+NASD R
Sbjct: 19 NNKARDALAEWAK----TWDDHREAVVVHGSPGIGKTSAAHALAADMGWETVELNASDQR 74
Query: 349 SSSTIENKILDVVQMNSVMADSRP-----KCLVIDEIDGALGD-GKGAVEVILKMVSAER 402
+ IE + N+ +A S + +++DE D G+ +G + ++V
Sbjct: 75 TGDVIE-RFAGRAAKNATLAGSSAGTSTRQLVILDEADNIHGNYDRGGASAVTRLV---- 129
Query: 403 KSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQP 462
KS++ +P++ I N+ Y + R LR + F
Sbjct: 130 KSSS--------------------------QPIVLIANEFYDMS-RGLRNACQEIEFRDV 162
Query: 463 SVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGS 522
S +V L+ IC E ++ S AL +AE D+RS +N LQ + + +E + D+
Sbjct: 163 SARSIVPVLRDICRKEGLEFESDALDRIAEMNSGDLRSAVNDLQAIAEGREKITEEDV-- 220
Query: 523 QVVGRKDMSRSAFDIWKEIFQK 544
V+G +D S F+ + ++
Sbjct: 221 -VMGDRDRSVGLFEFLDAVLKE 241
>gi|355571069|ref|ZP_09042339.1| Replication factor C large subunit [Methanolinea tarda NOBI-1]
gi|354826351|gb|EHF10567.1| Replication factor C large subunit [Methanolinea tarda NOBI-1]
Length = 468
Score = 83.2 bits (204), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 106/236 (44%), Gaps = 40/236 (16%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS 370
+K L+L G PG GKTT AH A G+ +E+NASD R+ + IE K+ + +
Sbjct: 36 KKPLILYGKPGTGKTTSAHALASDMGWEAIELNASDQRTRAVIE-KVAGSGSTTASFSGK 94
Query: 371 RPKCLVIDEIDGALGDG-KGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKA 429
R + ++IDE D G +G IL+++ R+
Sbjct: 95 R-RLVIIDEADNLHGTADRGGARAILELLRVARQ-------------------------- 127
Query: 430 SLLRPVICICNDLYA-PALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALT 488
PVI I NDLYA P +R + F +V RL+ IC+ E + S AL
Sbjct: 128 ----PVILIANDLYAVPG--EIRNRCEALQFRAIQARSIVPRLRFICSAEKIACSENALK 181
Query: 489 TLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQK 544
+AE + D+R+ ++ LQ ++ L+ DI + KD + FD+ ++ +
Sbjct: 182 KIAESSGGDMRAAIHMLQAAAAGRDRLD-EDIS---ISAKDTRSTIFDVIGALYGR 233
>gi|448091665|ref|XP_004197386.1| Piso0_004638 [Millerozyma farinosa CBS 7064]
gi|448096237|ref|XP_004198417.1| Piso0_004638 [Millerozyma farinosa CBS 7064]
gi|359378808|emb|CCE85067.1| Piso0_004638 [Millerozyma farinosa CBS 7064]
gi|359379839|emb|CCE84036.1| Piso0_004638 [Millerozyma farinosa CBS 7064]
Length = 812
Score = 83.2 bits (204), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 117/323 (36%), Gaps = 108/323 (33%)
Query: 196 EQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTIS 255
E+LW KYAP +L ++ ++ LWL+
Sbjct: 256 EKLWTVKYAPKDMNQLCGNKGQVNKLKLWLE----------------------------- 286
Query: 256 QNKKQNDSSFTRKNRGNRWSNGNFRNS-NNLEYENSNSKGIQDSWHKKTRSTGPPEQKVL 314
RW F N+ +N + S+ GI +
Sbjct: 287 -----------------RW----FDNAKHNFKNPGSDGSGIY---------------RAC 310
Query: 315 LLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA------ 368
L+ GPPG+GKT+ AH+ A+ G V+E NASD RS S + + + + SV+
Sbjct: 311 LISGPPGIGKTSAAHLVARSLGLDVLEKNASDVRSKSLLNSTLKSALDNTSVVGFFKHQH 370
Query: 369 ------DSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISK 422
+ + CL++DE+DG G +
Sbjct: 371 DASHSENDKRFCLIMDEVDGMSSGDHGGTGTLSSY------------------------- 405
Query: 423 KKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKT 482
CK + P+I ICND P +R+ ++ F +PS V +RL I + E +K
Sbjct: 406 ---CKITKM--PLILICNDKSLPKMRTFDRVTYDLPFRRPSEVEVKARLMTIAHREKIKL 460
Query: 483 SSIALTTLAEYTECDIRSCLNTL 505
+ L + T DIR +N L
Sbjct: 461 DPTVIGQLVQATSNDIRQMINLL 483
>gi|320582361|gb|EFW96578.1| Replication factor C subunit [Ogataea parapolymorpha DL-1]
Length = 804
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 97/216 (44%), Gaps = 42/216 (19%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA--- 368
+ +++ GPPG+GKTT AH+ AK G+ V+E NASD RS + ++ + +SV+
Sbjct: 304 RAVMISGPPGIGKTTAAHIVAKSLGFDVIEKNASDVRSKKLLNEQLRSSLSNSSVVGYFN 363
Query: 369 -------DSRPKCLVIDEIDG-ALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
++R +++DE+DG + GD G ++
Sbjct: 364 QLKTHDPNNRRIVMIMDEVDGMSSGDHGGGAQL--------------------------- 396
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
+ C+ P+I ICND P +R+ + + +P+ + SRL I + E +
Sbjct: 397 --SQFCRTTET--PLILICNDKSLPKMRTFDKTCYDLTWRRPTGKEMKSRLMTIAHREGL 452
Query: 481 KTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILN 516
K + L T DIR +N + + + ++ LN
Sbjct: 453 KLDPNIIDQLVAATNNDIRQIINIMSTVARTQKTLN 488
>gi|292656553|ref|YP_003536450.1| replication factor C large subunit [Haloferax volcanii DS2]
gi|448290554|ref|ZP_21481702.1| replication factor C large subunit [Haloferax volcanii DS2]
gi|291372005|gb|ADE04232.1| replication factor C large subunit [Haloferax volcanii DS2]
gi|445578464|gb|ELY32869.1| replication factor C large subunit [Haloferax volcanii DS2]
Length = 488
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 117/262 (44%), Gaps = 45/262 (17%)
Query: 289 NSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDR 348
N+ ++ W K T ++ +++ G PG+GKT+ AH A G+ VE+NASD R
Sbjct: 19 NNKARDALAEWAK----TWDDHREAVVVHGSPGIGKTSAAHALAADMGWETVELNASDQR 74
Query: 349 SSSTIENKILDVVQMNSVMADSRP-----KCLVIDEIDGALGD-GKGAVEVILKMVSAER 402
+ IE + N+ +A S + +++DE D G+ +G + ++V
Sbjct: 75 TGDVIE-RFAGRAAKNATLAGSSAGTSTRQLVILDEADNIHGNYDRGGASAVTRLV---- 129
Query: 403 KSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQP 462
KS++ +P++ I N+ Y + R LR + F
Sbjct: 130 KSSS--------------------------QPIVLIANEFYDMS-RGLRNACQEIEFRDV 162
Query: 463 SVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGS 522
S +V L+ IC E ++ S AL +AE D+RS +N LQ + + +E + D+
Sbjct: 163 SARSIVPVLRDICRKEGLEFESDALDRIAEMNSGDLRSAVNDLQAIAEGREKITEEDV-- 220
Query: 523 QVVGRKDMSRSAFDIWKEIFQK 544
V+G +D S F+ + ++
Sbjct: 221 -VMGDRDRSVGLFEFLDAVLKE 241
>gi|345006821|ref|YP_004809674.1| replication factor C large subunit [halophilic archaeon DL31]
gi|344322447|gb|AEN07301.1| Replication factor C large subunit [halophilic archaeon DL31]
Length = 494
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 137/326 (42%), Gaps = 63/326 (19%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSR 371
+ ++L G PG+GKT+ AH A G+ VE+NASD R++ IE + N+ + S
Sbjct: 38 EAVILYGSPGVGKTSAAHALAADMGWETVELNASDQRTADAIE-RFAGRAARNATLGGSA 96
Query: 372 P-------KCLVIDEIDGALGD-GKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKK 423
+ +++DE D G+ +G + + +V +++N
Sbjct: 97 SGEVGGGRQLVIVDEADNIHGNYDRGGAQAVTNLV---KEAN------------------ 135
Query: 424 KGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTS 483
+P++ I N+ Y + R LR + F S +V L+ IC E ++
Sbjct: 136 ---------QPIVLIANEFYEMS-RGLRNACQDIEFRDVSARSIVPVLRDICRKEGIEFE 185
Query: 484 SIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQ 543
S AL +A+ D+R + LQ + K L V D+ V G +D + F + I
Sbjct: 186 SDALERIADANSGDLRGAVKDLQATAEGKTHLTVDDV---VTGDRDTTVGIFTVLDAIL- 241
Query: 544 KRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVK 603
K K + ++ ++ + D L + + ++ ++ +DP +TV+
Sbjct: 242 --KEKSPQEALHTAYDADETPDDLTAWVEDK---------------VMKVYDP--EETVR 282
Query: 604 CLDCLGNSDLMHQYIMRTQQMPLYVY 629
+ L N+D +M TQ + Y
Sbjct: 283 AYEYLANADRWLGRVMATQNYSYWRY 308
>gi|429962047|gb|ELA41591.1| hypothetical protein VICG_01339 [Vittaforma corneae ATCC 50505]
Length = 552
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 104/238 (43%), Gaps = 35/238 (14%)
Query: 310 EQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMAD 369
E K LL GPPG+GKTT + G +E NASD RS + I + S+ D
Sbjct: 140 EYKAALLSGPPGVGKTTAVLAVCREQGITPIEFNASDLRSKKMLAETISNCTSNLSISKD 199
Query: 370 --SRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCK 427
+V+DE+DG D KG + PE +S K K
Sbjct: 200 WSVSKSVIVMDEVDGMTSD-KGGI-------------------------PELVSIIKKTK 233
Query: 428 KASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIAL 487
PVICICND +R+L F + ++ R+K + E A+
Sbjct: 234 V-----PVICICNDKTHQKMRTLSSYCLDIRFRKLDPRTIMPRIKIVLEKEGKTLPEGAI 288
Query: 488 TTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKR 545
+ + DIR LNT+Q L K +LN +D ++ + +K++ + F+I E+FQKR
Sbjct: 289 NEIIMNSNGDIRYILNTIQSL-VMKPVLN-LDFINKTLVKKNILKGTFEIAAELFQKR 344
>gi|448392808|ref|ZP_21567438.1| replication factor C large subunit [Haloterrigena salina JCM 13891]
gi|445664127|gb|ELZ16847.1| replication factor C large subunit [Haloterrigena salina JCM 13891]
Length = 498
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 103/230 (44%), Gaps = 38/230 (16%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS 370
+ +++ G PG+GKT+ AH A G+ V+E+NASD R + IE + + ++
Sbjct: 37 RDAVIVHGSPGVGKTSAAHALAGDMGWPVMELNASDSRGADVIERVAGEASKSGTLTGGE 96
Query: 371 RPKCLVI-DEIDGALG--DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCK 427
+ LVI DE D G D G+ EV + A +
Sbjct: 97 AGRRLVILDEADNFHGNADYGGSAEVTRVVKDANQ------------------------- 131
Query: 428 KASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIAL 487
P++ + N+ Y + +SLR + F S +V L+ IC E ++ AL
Sbjct: 132 ------PIVLVANEFYDMS-QSLRNSCETIEFRDVSKRSIVPVLRDICRREDIEFEEEAL 184
Query: 488 TTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
+AE T D+RS +N LQ + ++ E L V D+ V G++D + FD
Sbjct: 185 EKIAEDTSGDLRSAVNDLQAVAEEAERLTVEDV---VTGQRDTTEGIFDF 231
>gi|221507917|gb|EEE33504.1| replication factor C subunit, putative [Toxoplasma gondii VEG]
Length = 1260
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 96/217 (44%), Gaps = 52/217 (23%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIEN------------KILD 359
+ LL GPPG+GKTT A +AA+ GY V+E NASD R+ + IE+ LD
Sbjct: 671 RAALLSGPPGIGKTTAARLAAEAAGYDVLEYNASDARNKAHIEDIGNMTSGGLTLHSFLD 730
Query: 360 VVQMNSVMADS------RP--KCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENV 411
Q N S RP C+++DE+DG G +G + I+K++ +
Sbjct: 731 --QKNEASRGSPGRNAKRPMGACVLMDEVDGLSGGDRGGAQAIVKLIETSK--------- 779
Query: 412 AKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRL 471
C P+ICICND P +R++ F P ++ + SR+
Sbjct: 780 --------------C-------PIICICNDRMHPKVRTIASKCLDLRFHPPHMTALRSRV 818
Query: 472 KHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFL 508
+ I E + A+ L E D+R L +LQ +
Sbjct: 819 EKIAAAEDLSLDPQAVDYLCESAGGDLRQILTSLQMI 855
>gi|221483441|gb|EEE21760.1| replication factor C subunit, putative [Toxoplasma gondii GT1]
Length = 1260
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 129/308 (41%), Gaps = 75/308 (24%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIEN------------KILD 359
+ LL GPPG+GKTT A +AA+ GY V+E NASD R+ + IE+ LD
Sbjct: 671 RAALLSGPPGIGKTTAARLAAEAAGYDVLEYNASDARNKAHIEDIGNMTSGGLTLHSFLD 730
Query: 360 VVQMNSVMADS------RP--KCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENV 411
Q N S RP C+++DE+DG G +G + I+K++ +
Sbjct: 731 --QKNEASRGSPGRNAKRPMGACVLMDEVDGLSGGDRGGAQAIVKLIETSK--------- 779
Query: 412 AKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRL 471
C P+ICICND P +R++ F P ++ + SR+
Sbjct: 780 --------------C-------PIICICNDRMHPKVRTIASKCLDLRFHPPHMAALRSRV 818
Query: 472 KHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFL-------DKKKEILNVMDIGSQV 524
+ I E + A+ L E D+R L +LQ + K+K+ + +
Sbjct: 819 EKIAAAEDLSLDPQAVDYLCESAGGDLRQILTSLQMIAYETREKAKEKDWKSREEKADFS 878
Query: 525 VGRKD--MSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFD 582
G KD + F+ K++ ++ +L + + D S DYD+I
Sbjct: 879 TGLKDEQVMHGPFECCKQLLDAHQSSKL--------SRRQKLDKFFS------DYDLIPL 924
Query: 583 GIHENILQ 590
I EN L+
Sbjct: 925 LIQENYLE 932
>gi|329765851|ref|ZP_08257417.1| ATPase central domain-containing protein [Candidatus
Nitrosoarchaeum limnia SFB1]
gi|329137694|gb|EGG41964.1| ATPase central domain-containing protein [Candidatus
Nitrosoarchaeum limnia SFB1]
Length = 364
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 157/359 (43%), Gaps = 72/359 (20%)
Query: 299 WHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKIL 358
W K + P LLL GPPG+GKTT+A++ AK GY VV +NASD RS S I N+IL
Sbjct: 27 WFTKWKKGTKP----LLLVGPPGIGKTTIAYITAKQFGYDVVGLNASDVRSKSRI-NEIL 81
Query: 359 DVVQMNSVMADSRPKCLVIDEIDGALGDG-KGAVEVILKMVSAERKSNTAKENVAKEDQP 417
V + +V P + IDE+DG G G G E ++ ++ KE
Sbjct: 82 TPV-LGNVSLLGIP-MIFIDEVDGIHGRGDYGGAEALI--------------DILKEPTV 125
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVF--IQPSVSRVVSRLKHIC 475
P++ N + ++S++++ K F I P + +V L++I
Sbjct: 126 ----------------PIVLAANSDESDKMKSIKKVVKTISFKPIPPRLLKVY--LENIL 167
Query: 476 NNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAF 535
+ E+ K S +L + E + DIRS +N Q S V G + +
Sbjct: 168 SKENAKLSPGSLIKVIERSRGDIRSMINLTQ---------------SLVTGFNPQTEKS- 211
Query: 536 DIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHD 595
F+ + N+ ++++ L+S+ + D + D + +I+ +
Sbjct: 212 ------FENINVEDGINAFFKANSIDEARSVLYSM---QIDPKLKIDAFYSSIITSNLDN 262
Query: 596 PVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQ--KPNLEWP 652
+ K L + +D+++ IMRTQ L Y + I +++ +I+ + NL WP
Sbjct: 263 QTL---AKLLTIISEADMLYGKIMRTQNWRLLRYLNEILIGLYQNNERIRYAQYNLSWP 318
>gi|284165192|ref|YP_003403471.1| ATPase AAA [Haloterrigena turkmenica DSM 5511]
gi|284014847|gb|ADB60798.1| AAA ATPase central domain protein [Haloterrigena turkmenica DSM
5511]
Length = 497
Score = 82.8 bits (203), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 103/230 (44%), Gaps = 38/230 (16%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS 370
+ +++ G PG+GKT+ AH A G+ V+E+NASD R + IE + + ++
Sbjct: 36 RDAVIVHGSPGVGKTSAAHALAGDMGWPVMELNASDSRGADVIERIAGEASKSGTLTGGE 95
Query: 371 RPKCLVI-DEIDGALG--DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCK 427
+ LVI DE D G D G+ EV + A +
Sbjct: 96 AGRRLVILDEADNFHGNADYGGSAEVTRVVKDANQ------------------------- 130
Query: 428 KASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIAL 487
P++ + N+ Y + +SLR + F S +V L+ IC E ++ AL
Sbjct: 131 ------PIVLVANEFYDMS-QSLRNSCETIEFRDVSKRSIVPVLRDICRREDVEFEEEAL 183
Query: 488 TTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
+AE T D+RS +N LQ + ++ E L V D+ V G++D + FD
Sbjct: 184 EKIAEDTSGDLRSAVNDLQAVAEEAERLTVEDV---VTGQRDTTEGIFDF 230
>gi|428186667|gb|EKX55517.1| hypothetical protein GUITHDRAFT_99293 [Guillardia theta CCMP2712]
Length = 345
Score = 82.8 bits (203), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 110/276 (39%), Gaps = 68/276 (24%)
Query: 497 DIRSCLNTLQFLDKKKEILNVMDIGS--QVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSV 554
DIRSCLN LQ L + ++V + + V +MS FD+W F+ + + V
Sbjct: 9 DIRSCLNALQMLSRDGGHVDVAKLRTVGDCVRDCNMSSGLFDVWNATFKLAAKQDQKQGV 68
Query: 555 SSSSNVSNEFDFLHSLIS-NRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDL 613
LH L++ + I G N +++Y DP MLKT CL+ LG++D+
Sbjct: 69 KHMD--------LHKLLNFHSSSMTTILLGCQHNFPKVKYTDPRMLKTSACLESLGDADV 120
Query: 614 MHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWH 673
MH YI + Q L Y + H L + Q P++E+P++
Sbjct: 121 MHSYINQHQSYSLSPYLKIPCLKFHHLCAAPQWPSIEYPRA------------------- 161
Query: 674 SKIPPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYS 733
S P ++ +HL+SA+ + + VS M+++
Sbjct: 162 ---------------------------ASEPDIKVTNMHLMSAEHRQRIQDHVSIMLTFG 194
Query: 734 LTYKNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFI 769
L Y+ D + + L+ PPI + +
Sbjct: 195 LRYRPQTQD-----------NGKAELAMQPPIEDLV 219
>gi|424814735|ref|ZP_18239913.1| replication factor C large subunit [Candidatus Nanosalina sp.
J07AB43]
gi|339758351|gb|EGQ43608.1| replication factor C large subunit [Candidatus Nanosalina sp.
J07AB43]
Length = 395
Score = 82.8 bits (203), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 133/326 (40%), Gaps = 64/326 (19%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSR 371
K +LL G G GKT+L A GY +VE NASD R+ S ++ ++ + + S
Sbjct: 36 KPVLLHGQAGTGKTSLVEALANDLGYELVETNASDVRTKSKLKEELKEATRQASFYGG-- 93
Query: 372 PKCLVIDEIDGALGDG-KGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKAS 430
K +++DE+DG G+ +G V I +V R
Sbjct: 94 QKLILVDEVDGMSGNSDRGGVSEISDIVDETR---------------------------- 125
Query: 431 LLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTL 490
PV+ ND Y +R+LR +K + + + L+ I NE ++ A +
Sbjct: 126 --FPVVMTANDAYDSKIRTLRNKSKTIKLDSVHTNSIAAHLRDILENEGIEYEDGAPKRI 183
Query: 491 AEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRL 550
A +RS +N LQ + +E L + D+ +V+G ++ ++ F+ K +F
Sbjct: 184 ARSAGGQMRSAINDLQAVAMGQEELLIDDL--EVIGGRNGNQDIFEALKIVFNT------ 235
Query: 551 RNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLK----TVKCLD 606
+ S++ + +N+ + D D I EN P K K +
Sbjct: 236 -TTASTAEDATNDLE---------EDADTFLQWIRENT-------PREYKKQGDVAKAYN 278
Query: 607 CLGNSDLMHQYIMRTQQMPL--YVYQ 630
+ +DL + I R Q L Y+Y+
Sbjct: 279 YISKADLFNGRIRRRQNWKLLKYLYK 304
>gi|20093445|ref|NP_613292.1| replication factor C large subunit [Methanopyrus kandleri AV19]
gi|42559499|sp|Q8TZC5.1|RFCL_METKA RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|19886264|gb|AAM01222.1| Replication factor C (ATPase involved in DNA replication)
[Methanopyrus kandleri AV19]
Length = 510
Score = 82.8 bits (203), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 149/339 (43%), Gaps = 43/339 (12%)
Query: 298 SWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKI 357
+W + PE + +LL GPPG GKT+ A+ A G+ V+E+NASD R+ + IE +
Sbjct: 28 AWANEWARGSIPEPRAVLLHGPPGTGKTSAAYALAHDFGWDVIELNASDKRTRNVIEKIV 87
Query: 358 LDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
S++ +R E G +G + +L +V + +ED+
Sbjct: 88 GGASTSRSLLRMTR-------EAGGDYEHVEGHSDRVLVLVDEVDGIDP------REDRG 134
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
+ + ++A P++ + ND + +SLR ++ F + V+ +V L+ IC
Sbjct: 135 GVTALTRAVRQAR--NPMVLVANDPWVLP-KSLRDAVRMIEFRRLRVNDIVEALRRICER 191
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
E ++ +AL +A+ D+R+ +N L+ L + + D+ + +G +D + F+
Sbjct: 192 EGIEYEEVALRRIAKRARGDLRAAINDLEALARPTGRVTSDDV--EALGWRDKEITIFEA 249
Query: 538 WKEIFQK--RKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHD 595
IF K R+ +R + N+ + D DVI I +NI + Y D
Sbjct: 250 LGRIFNKPPRQARR------ALWNLDEDPD------------DVIL-WIAQNIPR-AYRD 289
Query: 596 PVMLKTVKCLDCLGNSDLMHQYIMRTQQMPL-YVYQPPL 633
P + + D L +D+ + T YVY L
Sbjct: 290 PE--EIARAYDYLSKADVFSSRAIETGDWRFKYVYATDL 326
>gi|116753783|ref|YP_842901.1| replication factor C large subunit [Methanosaeta thermophila PT]
gi|121693813|sp|A0B6D7.1|RFCL_METTP RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|116665234|gb|ABK14261.1| replication factor C large subunit [Methanosaeta thermophila PT]
Length = 467
Score = 82.8 bits (203), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 165/389 (42%), Gaps = 79/389 (20%)
Query: 284 NLEYENSNSKGIQD------SWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGY 337
NL+ N+K + + +W K G PE K L+L GPPG+GKT+ A A +
Sbjct: 12 NLDGILGNAKAVSELRAWAMAWEK-----GRPEVKCLILYGPPGVGKTSAALALASEMDW 66
Query: 338 HVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALGD-GKGAVEVILK 396
+E+NASD R++ I++ Q+++ R + +++DE D G +G IL+
Sbjct: 67 DYIELNASDQRTAEIIKSIAGPASQVSTF--SGRRRLVILDEADNLHGTYDRGGAAAILR 124
Query: 397 MVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKV 456
++ K A+ +PVI I N+ Y + LR +
Sbjct: 125 VI----------------------------KNAT--QPVILIANEYYNIE-KPLRDACRG 153
Query: 457 HVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILN 516
F + S L+ IC +E ++ A+ +A + D+RS +N L+ + + L
Sbjct: 154 VQFRSIRAQTIASLLREICRSEGIECEPEAVMHIAAMSGGDLRSAINDLEAAARGLKHLR 213
Query: 517 VMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNE-FDFLHSLISNRG 575
+ D+ + +D+ S F + IF+ + R+++ ++ + D +H
Sbjct: 214 LEDVATS---ERDVKASIFRVLDSIFKGEDS---RSALEATYQLDESPEDLIH------- 260
Query: 576 DYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPL-- 633
I EN L + Y D + K +CL +D+ + R Q L+ Y L
Sbjct: 261 -------WIDEN-LPIVYKDREL---AKGFECLSRADIFLGRVRRRQNYTLWRYAAFLMT 309
Query: 634 ----AIT--VHRLVSQIQKPNLEWPKSYQ 656
A++ V R +Q + P+L W + Q
Sbjct: 310 GGVRAVSSKVRRGYTQFRPPSL-WKRLGQ 337
>gi|433425430|ref|ZP_20406706.1| replication factor C large subunit [Haloferax sp. BAB2207]
gi|432197824|gb|ELK54179.1| replication factor C large subunit [Haloferax sp. BAB2207]
Length = 488
Score = 82.8 bits (203), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 110/240 (45%), Gaps = 41/240 (17%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS 370
++ +++ G PG+GKT+ AH A G+ VE+NASD R+ IE + N+ +A S
Sbjct: 37 REAVVVHGSPGIGKTSAAHALAADMGWETVELNASDQRTGDVIE-RFAGRAAKNATLAGS 95
Query: 371 RP-----KCLVIDEIDGALGD-GKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKK 424
+ +++DE D G+ +G + ++V KS++
Sbjct: 96 SAGTSTRQLVILDEADNIHGNYDRGGASAVTRLV----KSSS------------------ 133
Query: 425 GCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSS 484
+P++ I N+ Y + R LR + F S +V L+ IC E ++ S
Sbjct: 134 --------QPIVLIANEFYDMS-RGLRNACQEIEFRDVSARSIVPVLRDICRKEGLEFES 184
Query: 485 IALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQK 544
AL +AE D+RS +N LQ + + +E + D+ V+G +D S F+ + ++
Sbjct: 185 DALDRIAEMNSGDLRSAVNDLQAIAEGREKITEEDV---VMGDRDRSVGLFEFLDAVLKE 241
>gi|448604825|ref|ZP_21657870.1| replication factor C large subunit [Haloferax sulfurifontis ATCC
BAA-897]
gi|445743146|gb|ELZ94629.1| replication factor C large subunit [Haloferax sulfurifontis ATCC
BAA-897]
Length = 486
Score = 82.8 bits (203), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 111/244 (45%), Gaps = 41/244 (16%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS 370
++ +++ G PG+GKT+ AH A G+ VE+NASD R+ IE + N+ +A S
Sbjct: 37 REAVVVHGSPGIGKTSAAHALAADMGWETVELNASDQRTGDVIE-RFAGRAAKNATLAGS 95
Query: 371 RP-----KCLVIDEIDGALGD-GKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKK 424
+ +++DE D G+ +G + ++V KS++
Sbjct: 96 STGTSTRQLVILDEADNIHGNYDRGGASAVTRLV----KSSS------------------ 133
Query: 425 GCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSS 484
+P++ I N+ Y + R LR + F S +V L+ IC E ++ S
Sbjct: 134 --------QPIVLIANEFYDMS-RGLRNACQEIEFRDVSARSIVPVLRDICRKEGLEFES 184
Query: 485 IALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQK 544
AL +AE D+RS +N LQ + + +E + D+ V+G +D S F+ + ++
Sbjct: 185 DALDRIAEMNSGDLRSAVNDLQAIAEGREKITEEDV---VMGDRDRSVGLFEFLDAVLKE 241
Query: 545 RKTK 548
+
Sbjct: 242 ESAQ 245
>gi|237839249|ref|XP_002368922.1| replication factor C subunit, putative [Toxoplasma gondii ME49]
gi|211966586|gb|EEB01782.1| replication factor C subunit, putative [Toxoplasma gondii ME49]
Length = 1260
Score = 82.8 bits (203), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 129/308 (41%), Gaps = 75/308 (24%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIEN------------KILD 359
+ LL GPPG+GKTT A +AA+ GY V+E NASD R+ + IE+ LD
Sbjct: 671 RAALLSGPPGIGKTTAARLAAEAAGYDVLEYNASDARNKAHIEDIGNMTSGGLTLHSFLD 730
Query: 360 VVQMNSVMADS------RP--KCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENV 411
Q N S RP C+++DE+DG G +G + I+K++ +
Sbjct: 731 --QKNEASRGSPGRNAKRPMGACVLMDEVDGLSGGDRGGAQAIVKLIETSK--------- 779
Query: 412 AKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRL 471
C P+ICICND P +R++ F P ++ + SR+
Sbjct: 780 --------------C-------PIICICNDRMHPKVRTIASKCLDLRFHPPHMAALRSRV 818
Query: 472 KHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFL-------DKKKEILNVMDIGSQV 524
+ I E + A+ L E D+R L +LQ + K+K+ + +
Sbjct: 819 EKIAAAEDLSLDPQAVDYLCESAGGDLRQILTSLQMIAYETREKAKEKDWKSREEKADFS 878
Query: 525 VGRKD--MSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFD 582
G KD + F+ K++ ++ +L + + D S DYD+I
Sbjct: 879 TGLKDEQVMHGPFECCKQLLDAHQSSKL--------SRRQKLDKFFS------DYDLIPL 924
Query: 583 GIHENILQ 590
I EN L+
Sbjct: 925 LIQENYLE 932
>gi|393796559|ref|ZP_10379923.1| ATPase central domain-containing protein [Candidatus
Nitrosoarchaeum limnia BG20]
Length = 368
Score = 82.8 bits (203), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 157/359 (43%), Gaps = 72/359 (20%)
Query: 299 WHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKIL 358
W K + P LLL GPPG+GKTT+A++ AK GY +V +NASD RS S I N+IL
Sbjct: 31 WFTKWKKGTKP----LLLVGPPGIGKTTIAYITAKQFGYDMVGLNASDVRSKSRI-NEIL 85
Query: 359 DVVQMNSVMADSRPKCLVIDEIDGALGDG-KGAVEVILKMVSAERKSNTAKENVAKEDQP 417
V + +V P + IDE+DG G G G E ++ ++ KE
Sbjct: 86 TPV-LGNVSLLGIP-MIFIDEVDGIHGRGDYGGAEALI--------------DILKEPTV 129
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVF--IQPSVSRVVSRLKHIC 475
P++ N + ++S++++ K F I P + +V L++I
Sbjct: 130 ----------------PIVLAANSDESDKMKSIKKVVKTISFKPIPPRLLKV--YLENIL 171
Query: 476 NNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAF 535
+ E+ K S +L + E + DIRS +N Q S V G + +
Sbjct: 172 SKENAKLSPGSLIKVIERSRGDIRSMINLTQ---------------SLVTGFNPQTEKS- 215
Query: 536 DIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHD 595
F+ + N+ ++++ L+S+ + D + D + +I+ +
Sbjct: 216 ------FENINVEDGINAFFKANSIDEARSVLYSM---QIDPKLKIDAFYSSIITSNLDN 266
Query: 596 PVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQ--KPNLEWP 652
+ K L + +D+++ IMRTQ L Y + I +++ +I+ + NL WP
Sbjct: 267 QTL---AKLLTIISEADMLYGKIMRTQNWRLLRYLNEILIGLYQNNERIRYSQYNLSWP 322
>gi|448373527|ref|ZP_21557613.1| replication factor C large subunit [Halovivax asiaticus JCM 14624]
gi|445661479|gb|ELZ14262.1| replication factor C large subunit [Halovivax asiaticus JCM 14624]
Length = 511
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 107/236 (45%), Gaps = 34/236 (14%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS 370
+K +++ G PG+GKT+ AH A + V+E+NASD R I+ + + ++ +
Sbjct: 37 RKAVIVHGSPGVGKTSAAHALAADMNWPVMELNASDHRGKDIIDRVAGEASKSGTLTGGT 96
Query: 371 RPKCLVI-DEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKA 429
+ LVI DE D G +A+ + A +V K
Sbjct: 97 SGRRLVILDEADNFHG-------------NADYGGSRAVTDVVK---------------- 127
Query: 430 SLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTT 489
S +P++ + N+ Y + SLR K F S +V L+ IC E ++ + AL
Sbjct: 128 SASQPIVLVANEFYDMS-NSLRNACKTIEFRDVSTRSIVPVLRDICRKEDIEFEADALRA 186
Query: 490 LAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKR 545
+AE T D+RS +N LQ + + E L D+ V G +D + FD E+ +++
Sbjct: 187 IAENTSGDLRSAVNDLQAIAESTERLTEDDV---VTGSRDTTEGIFDYLDELIKEK 239
>gi|448307509|ref|ZP_21497404.1| replication factor C large subunit [Natronorubrum bangense JCM
10635]
gi|445595681|gb|ELY49785.1| replication factor C large subunit [Natronorubrum bangense JCM
10635]
Length = 495
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 108/240 (45%), Gaps = 38/240 (15%)
Query: 301 KKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDV 360
K+ T ++ +++ G PG+GKT+ AH A G+ V+E+NASD+R + IE +
Sbjct: 27 KEWAQTWDDHREAVIVHGSPGVGKTSAAHALANDLGWPVMELNASDNRKADVIERIAGEA 86
Query: 361 VQMNSVMADSRPKCLVI-DEIDGALG--DGKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
+ ++ A + LV+ DE D G D G+ EV + +A
Sbjct: 87 AKSGTLTAGGAGRRLVVLDEADNFHGNADYGGSREVTRVVKNAN---------------- 130
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
+P++ + N+ Y + +SLR + F S +V L+ IC
Sbjct: 131 ---------------QPIVLVANEFYDMS-QSLRNACETVEFRDVSKRSIVPVLRDICRR 174
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
E ++ AL +A+ T D+RS +N LQ + + E L V D+ V G +D + FD
Sbjct: 175 EGIEFEEDALKKIADATSGDLRSAVNDLQAVAETAERLTVDDV---VTGDRDTTEGIFDF 231
>gi|403362369|gb|EJY80911.1| BRCT domain containing protein [Oxytricha trifallax]
Length = 993
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 100/207 (48%), Gaps = 41/207 (19%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIEN--------KILDVVQM 363
+ L+ GPPG+GKT+ + AK GY+++E NASD+RS +IEN K +D Q
Sbjct: 415 RACLISGPPGIGKTSSVRIIAKELGYNLMEFNASDNRSKKSIENLLQNMTTCKSIDKYQQ 474
Query: 364 NSVMADSRPK--CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKIS 421
++M+ ++ + +++DE+DG + +G + ++ ++
Sbjct: 475 YNLMSKNKKEKTLILMDEVDGVSANDRGGLGALILII----------------------- 511
Query: 422 KKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMK 481
K +L+ P++C+ ND L SL F +PS ++ R+K I E++K
Sbjct: 512 ------KKTLI-PIVCVANDSKHRKLVSLLNHCYDLKFAKPSNEDMLKRIKFIAEKENLK 564
Query: 482 TSSIAL-TTLAEYTECDIRSCLNTLQF 507
+ + T + + + DIR +N +Q
Sbjct: 565 IDRLDIYTQIFDMSGQDIRQVINMIQM 591
>gi|397780048|ref|YP_006544521.1| Replication factor C large subunit [Methanoculleus bourgensis MS2]
gi|396938550|emb|CCJ35805.1| Replication factor C large subunit Short=RFC large subunit
[Methanoculleus bourgensis MS2]
Length = 449
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 105/238 (44%), Gaps = 36/238 (15%)
Query: 310 EQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMAD 369
E+K L+L G PG+GKT+ AH A + VVE+NASD R+ +E ++ ++
Sbjct: 35 EKKPLILYGKPGIGKTSCAHALANDMNWEVVELNASDQRTKQALE-RVAGSSSTTGSLSG 93
Query: 370 SRPKCLVIDEIDGALGDG-KGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKK 428
+ K +++DE D G +G I+++++A ++
Sbjct: 94 ASHKLILLDEADNLHGQADRGGARAIVEIIAASQQ------------------------- 128
Query: 429 ASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALT 488
P+I I ND YA + + L+ + F +V RL+HIC E + AL
Sbjct: 129 -----PIILIANDYYALS-KDLKAATEPVQFRALQARSIVPRLRHICAAEGVTCDPAALD 182
Query: 489 TLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRK 546
+A D+R+ +N L KE L V D+ + KD + F++ + R+
Sbjct: 183 EIAGRAGGDMRAAVNMLYAAAIGKERLEVDDVQTST---KDQRSTIFELVGGVLAGRR 237
>gi|448460408|ref|ZP_21597233.1| replication factor C large subunit [Halorubrum lipolyticum DSM
21995]
gi|445807149|gb|EMA57235.1| replication factor C large subunit [Halorubrum lipolyticum DSM
21995]
Length = 497
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 135/332 (40%), Gaps = 68/332 (20%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIEN------------KIL 358
++ ++L G PG+GKT+ AH A G+ VE+NASD R++ IE
Sbjct: 37 REAVVLHGSPGVGKTSAAHALANDMGWETVELNASDQRTADVIERFAGRAARNATLGGSA 96
Query: 359 DVVQMNSVMADSRPKCLVIDEIDGALGD-GKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
SR + +++DE D G+ +G I ++V
Sbjct: 97 AGGGATGGDTASR-QLVILDEADNIHGNYDRGGASAITELV------------------- 136
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
K+ G +P++ I ND Y A R LR + F S +V L+ +C
Sbjct: 137 ----KESG-------QPIVLIANDYYDMA-RGLRNATEEIEFRDVSARSIVPVLRDVCRK 184
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
E ++ S AL +AE D+R +N LQ + ++ + V D+ V G +D + F
Sbjct: 185 EGIEFESDALERIAERNRGDLRGAINDLQAATEGRDSIAVEDV---VTGDRDKALGLFPF 241
Query: 538 WKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPV 597
+ ++ + ++ S+ V D L I N N+L + ++P
Sbjct: 242 LDAVLKEESAE---EALQSAYAVDETPDDLTKWIEN-------------NVLDV--YEP- 282
Query: 598 MLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVY 629
++ V+ D L N+D+ + TQ + Y
Sbjct: 283 -MEAVRAYDFLANADVWLGRVRATQNYTYWRY 313
>gi|330507531|ref|YP_004383959.1| replication factor C large subunit [Methanosaeta concilii GP6]
gi|328928339|gb|AEB68141.1| replication factor C large subunit [Methanosaeta concilii GP6]
Length = 534
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 141/347 (40%), Gaps = 68/347 (19%)
Query: 290 SNSKGIQD------SWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVN 343
N K I D SW + TG ++L GP G GKT+ A A + +E+N
Sbjct: 21 GNGKAIDDLREWALSWERSEPITG-----AVILYGPAGTGKTSAALALAHDFDWDYIEMN 75
Query: 344 ASDDRSSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALGDG-KGAVEVILKMVSAER 402
ASD R++ IE + V S +P+ +++DE D G +G +L++V
Sbjct: 76 ASDARTAGMIEK--IAVPASRSQTFSGKPRLVILDEADNLHGTADRGGAAAMLRLV---- 129
Query: 403 KSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQP 462
NT L+PVI I N+ Y +SLR + F
Sbjct: 130 -RNT-------------------------LQPVILIANEYYEID-KSLRDATRGIQFRSV 162
Query: 463 SVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGS 522
+ + L+ IC E + + L T+AE D+RS +N LQ + +E L D+ +
Sbjct: 163 RSTTIAQALRAICQAEGIDCNPDLLVTIAERAGGDMRSGINDLQAAAEGQETLREEDLAT 222
Query: 523 QVVGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFD 582
++D+ S F + + I++ K ++ +S N+ + L +
Sbjct: 223 ---AQRDVKSSIFRVLEVIYKGNNAK---EALEASYNLDESPEDL-------------IN 263
Query: 583 GIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVY 629
+ EN L L Y +L + + L SD+ + R Q L+ Y
Sbjct: 264 WVDEN-LPLAYSGQDLL---RGFETLARSDIFLGRVRRRQNYGLWRY 306
>gi|150401783|ref|YP_001325549.1| replication factor C large subunit [Methanococcus aeolicus
Nankai-3]
gi|166225152|sp|A6UWR5.1|RFCL_META3 RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|150014486|gb|ABR56937.1| AAA ATPase central domain protein [Methanococcus aeolicus Nankai-3]
Length = 474
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 88/198 (44%), Gaps = 33/198 (16%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSR 371
K +LL GPPG GKTTL + A G+ ++E+NASD R+ I + S+ +
Sbjct: 39 KPVLLVGPPGCGKTTLTNALANDYGFELIELNASDKRNKDIIRQIVGGASSSKSITG--K 96
Query: 372 PKCLVIDEIDGALGDG-KGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKAS 430
+V+DE+DG G+ +G V I+K++ +
Sbjct: 97 RVLIVLDEVDGLSGNSDRGGVSEIIKIIKNAK---------------------------- 128
Query: 431 LLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTL 490
P+I ND+Y P+L SLR + + + +V L+ I E + L +
Sbjct: 129 --NPIILTANDIYKPSLMSLRTVCNIVKIGSVHTNSIVPVLRRISLKEGFEVDDKILKII 186
Query: 491 AEYTECDIRSCLNTLQFL 508
A++ D+RS +N L+ L
Sbjct: 187 AKHAGGDVRSAINDLESL 204
>gi|384485534|gb|EIE77714.1| hypothetical protein RO3G_02418 [Rhizopus delemar RA 99-880]
Length = 841
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 89/197 (45%), Gaps = 57/197 (28%)
Query: 314 LLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPK 373
+L+ GPPG+GKTT AHV A+ GY +E NASD A+ +PK
Sbjct: 361 VLISGPPGIGKTTAAHVVARANGYEPLEFNASD---------------------AEPKPK 399
Query: 374 ----CLVIDEIDG-ALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKK 428
L++DE+DG + GD GAVE+ ++ KK
Sbjct: 400 GKKVVLIMDEVDGMSAGDRGGAVELASQI-----------------------------KK 430
Query: 429 ASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALT 488
+ + PVICICND+ +P + L ++ F + +++ SR+ I E + A+
Sbjct: 431 SKI--PVICICNDVRSPKVAPLLRVCFDARFKRTPAAQIRSRIMSIAFKEKLDIKPNAID 488
Query: 489 TLAEYTECDIRSCLNTL 505
L T+ DIR +N L
Sbjct: 489 ELVASTQNDIRQIINIL 505
>gi|170065938|ref|XP_001868075.1| replication factor C large subunit [Culex quinquefasciatus]
gi|167862647|gb|EDS26030.1| replication factor C large subunit [Culex quinquefasciatus]
Length = 1042
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 101/460 (21%), Positives = 172/460 (37%), Gaps = 135/460 (29%)
Query: 199 WVDKYAPNSFTELLSDE--QTNREVLL-WLKQWDSCVFGSEIRSTSEEVLSALRRHSTIS 255
WVDKY P S +++ +N + LL WL +W S G ++ L+R S +
Sbjct: 457 WVDKYKPTSIKQIIGQAGPASNVQKLLNWLSKWHSNHDGKKV----------LQRPSPWA 506
Query: 256 QNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLL 315
+N +D ++ K L
Sbjct: 507 KN---DDGAYF---------------------------------------------KAAL 518
Query: 316 LCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMAD------ 369
L GPPG+GKTT A + K G+ VE NASD RS ++ ++ +++ S+
Sbjct: 519 LSGPPGVGKTTTATLVCKELGFDAVEFNASDTRSKKLLKEQVSELLTNKSLFGYFTGNGK 578
Query: 370 ----SRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKK 424
+ LV+DE+DG G + +G ++ ++ ++ + S+
Sbjct: 579 GDKVTHKHVLVMDEVDGMAGNEDRGGIQELIGLI---KDSHV------------------ 617
Query: 425 GCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICN--NESMKT 482
P+IC+CND +RSL F +P V ++ R +H +K
Sbjct: 618 ---------PIICMCNDRNHQKMRSLVNYCFDLRFNKPRVEQIKVR-RHDVGLLQGGLKL 667
Query: 483 SSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV-----VGRKDMSRSAFDI 537
+ AL + T D+R LN L K + +Q RKD+ +D+
Sbjct: 668 APGALEEIIAGTGGDVRQTLNHLALHSTGKTLGGTSLSAAQAKQEAQTARKDVKMGPWDV 727
Query: 538 WKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQL------ 591
+++F + + S+ S++ F H DY + + EN L++
Sbjct: 728 IRKVFSAEDHRTM--SIHDKSDL-----FFH-------DYSLAPLFVQENYLKVTPKVPK 773
Query: 592 -QYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQ 630
Q+ D + L D L DL+ + I + L Q
Sbjct: 774 AQHLDQIAL----AADSLSRGDLIDRRIRSSMAWSLLPMQ 809
>gi|403358750|gb|EJY79030.1| BRCT domain containing protein [Oxytricha trifallax]
Length = 993
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 100/207 (48%), Gaps = 41/207 (19%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIEN--------KILDVVQM 363
+ L+ GPPG+GKT+ + AK GY+++E NASD+RS +IEN K +D Q
Sbjct: 415 RACLISGPPGIGKTSSVRIIAKELGYNLMEFNASDNRSKKSIENLLQNMTTCKSIDKYQQ 474
Query: 364 NSVMADSRPK--CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKIS 421
++M+ ++ + +++DE+DG + +G + ++ ++
Sbjct: 475 YNLMSKNKKEKTLILMDEVDGVSANDRGGLGALILII----------------------- 511
Query: 422 KKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMK 481
K +L+ P++C+ ND L SL F +PS ++ R+K I E++K
Sbjct: 512 ------KKTLI-PIVCVANDSKHRKLVSLLNHCYDLKFAKPSNEDMLKRIKFIAEKENLK 564
Query: 482 TSSIAL-TTLAEYTECDIRSCLNTLQF 507
+ + T + + + DIR +N +Q
Sbjct: 565 IDRLDIYTQIFDMSGQDIRQVINMIQM 591
>gi|282163105|ref|YP_003355490.1| replication factor C large subunit [Methanocella paludicola SANAE]
gi|282155419|dbj|BAI60507.1| replication factor C large subunit [Methanocella paludicola SANAE]
Length = 506
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 128/319 (40%), Gaps = 54/319 (16%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS 370
+K +L G PG+GKT+ A A G+ +E+NASD R+ I + + +
Sbjct: 42 KKAAILYGGPGIGKTSAALALAHDMGWDYIEMNASDQRTKDAINKVAGSASKTGTFGGTN 101
Query: 371 RPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKAS 430
+ L++DE D G+ +R A NV K
Sbjct: 102 ERRLLILDEADNLHGN-------------YDRGGEAAIINVIKNTN-------------- 134
Query: 431 LLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTL 490
+P+I I ND YA + + LR A+ F + +V LK IC E++K AL +
Sbjct: 135 --QPIILIANDFYALS-KPLRDAAEPIQFRALLSTSIVKALKKICAAENIKCQPEALMKI 191
Query: 491 AEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRL 550
AE T D+RS +N LQ +E + + D+ + G +D+ S F + IF+ +
Sbjct: 192 AERTN-DMRSAINDLQAAAMGREEVTLADVST---GERDVPESIFKVMGLIFRGDDPGKA 247
Query: 551 RNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGN 610
R +V + + + EN L +YHD + + D L
Sbjct: 248 RRAVMDLDESPED----------------LIGWVDEN-LPREYHDGDL---ERGFDALSK 287
Query: 611 SDLMHQYIMRTQQMPLYVY 629
+DL + R ++ Y
Sbjct: 288 ADLFLARVRRRMDYGMWRY 306
>gi|401410256|ref|XP_003884576.1| putative replication factor c subunit [Neospora caninum Liverpool]
gi|325118994|emb|CBZ54546.1| putative replication factor c subunit [Neospora caninum Liverpool]
Length = 1128
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 97/228 (42%), Gaps = 61/228 (26%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIE---NKILDVVQMNSVM- 367
+ LL GPPG+GKTT A +AA+ GY V+E NASD R+ + IE N + ++S +
Sbjct: 650 RAALLSGPPGIGKTTAARLAAEAAGYDVLEYNASDARNKAHIEDIGNMTSGGLTLHSFLD 709
Query: 368 -------------------------ADSRP--KCLVIDEIDGALGDGKGAVEVILKMVSA 400
RP C+++DE+DG G +G + I+K++
Sbjct: 710 QKNEASHGTPEEIQTAAFAFLFPGRNSKRPMGACVLMDEVDGLSGGDRGGAQAIVKLIET 769
Query: 401 ERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFI 460
+ C P+ICICND P +R++ F
Sbjct: 770 SK-----------------------C-------PIICICNDRMHPKVRTIASKCLDLRFH 799
Query: 461 QPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFL 508
P ++ + SR++ I E + A+ L E D+R LN+LQ L
Sbjct: 800 PPHMAALRSRVEDIATAEDLALEPQAIGYLCESAGGDLRQILNSLQML 847
>gi|448623358|ref|ZP_21669901.1| replication factor C large subunit [Haloferax denitrificans ATCC
35960]
gi|445752760|gb|EMA04182.1| replication factor C large subunit [Haloferax denitrificans ATCC
35960]
Length = 489
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 110/240 (45%), Gaps = 41/240 (17%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS 370
++ +++ G PG+GKT+ AH A G+ VE+NASD R+ IE + N+ +A S
Sbjct: 37 REAVVVHGSPGIGKTSAAHALAADMGWETVELNASDQRTGDVIE-RFAGRAAKNATLAGS 95
Query: 371 RP-----KCLVIDEIDGALGD-GKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKK 424
+ +++DE D G+ +G + ++V KS++
Sbjct: 96 STGTSTRQLVILDEADNIHGNYDRGGASAVTRLV----KSSS------------------ 133
Query: 425 GCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSS 484
+P++ I N+ Y + R LR + F S +V L+ IC E ++ S
Sbjct: 134 --------QPIVLIANEFYDMS-RGLRNACQEIEFRDVSARSIVPVLRDICRKEGLEFES 184
Query: 485 IALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQK 544
AL +AE D+RS +N LQ + + +E + D+ V+G +D S F+ + ++
Sbjct: 185 DALDRIAEMNSGDLRSAVNDLQAVAEGREKITEEDV---VMGDRDRSVGLFEFLDAVLKE 241
>gi|359479291|ref|XP_002265891.2| PREDICTED: replication factor C subunit 1-like [Vitis vinifera]
Length = 933
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 132/345 (38%), Gaps = 109/345 (31%)
Query: 193 VVHEQL-WVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRH 251
+ H L W +KY P +++ ++ +++ WL W+ E+ L
Sbjct: 309 IGHASLTWTEKYKPKVPNDIIGNQSLVKQLHEWLAHWN------------EQFLHT---- 352
Query: 252 STISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQ 311
T + KKQNDS +
Sbjct: 353 GTKGKGKKQNDSG---------------------------------------------AK 367
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIE----------NKILDVV 361
K +LL G PG+GKTT A + ++ G+ +EVNASD+R + + N I ++V
Sbjct: 368 KAVLLSGTPGIGKTTSAKLVSQMLGFQAIEVNASDNRGKANAKIDKGIGGSNANSIKELV 427
Query: 362 QMNSVMA----DSRPK-CLVIDEIDG-ALGDGKGAVEVILKMVSAERKSNTAKENVAKED 415
++ A PK L++DE+DG + GD G ++I + ++
Sbjct: 428 SNEALGAHMDRSKHPKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICI-------- 479
Query: 416 QPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHIC 475
CND Y+ L+SL + F +P+ ++ RL +
Sbjct: 480 -----------------------CNDRYSQKLKSLVNYCLLLSFRKPTKQQMAKRLLQVA 516
Query: 476 NNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDI 520
N E ++ + IAL LAE D+R LN LQ++ ++ D+
Sbjct: 517 NAEGLQVNEIALEELAERVNGDMRMALNQLQYMSLSMSVIKYDDV 561
>gi|300175670|emb|CBK20981.2| unnamed protein product [Blastocystis hominis]
Length = 344
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 50/211 (23%)
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM- 367
P+ K +LL GPPG+GKTT AH+ AK CGY +VE+NASD R+ +++ D++ +V
Sbjct: 153 PDAKAVLLSGPPGIGKTTSAHIIAKECGYEIVELNASDTRNRKSVQRFFNDMIVTKNVHQ 212
Query: 368 -----------ADSRPKC--------LVIDEIDGALGDGKGAVEVILKMVSAERKSNTAK 408
+ S+PK +V+DE+DG G +G + +++++ A
Sbjct: 213 FFSDHSSAKTDSQSKPKVGNANAKILVVMDEVDGMGGGDRGGIGELIQVIEAS------- 265
Query: 409 ENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVV 468
+ P+ICICND ++SL + F + ++
Sbjct: 266 -----------------------MIPIICICNDRDNKKIQSLARKCYDCSFGKLPQDAMI 302
Query: 469 SRLKHICNNESMKTSSIALTTLAEYTECDIR 499
+RL+ IC E + S L L E + D+R
Sbjct: 303 TRLQFICKKEEIAMSKADLAELVESSGGDMR 333
>gi|448545771|ref|ZP_21626182.1| replication factor C large subunit [Haloferax sp. ATCC BAA-646]
gi|448547884|ref|ZP_21627270.1| replication factor C large subunit [Haloferax sp. ATCC BAA-645]
gi|448556790|ref|ZP_21632384.1| replication factor C large subunit [Haloferax sp. ATCC BAA-644]
gi|445703581|gb|ELZ55507.1| replication factor C large subunit [Haloferax sp. ATCC BAA-646]
gi|445715695|gb|ELZ67450.1| replication factor C large subunit [Haloferax sp. ATCC BAA-645]
gi|445716139|gb|ELZ67890.1| replication factor C large subunit [Haloferax sp. ATCC BAA-644]
Length = 487
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 109/240 (45%), Gaps = 41/240 (17%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS 370
++ +++ G PG+GKT+ AH A G+ VE+NASD R+ IE + N+ +A S
Sbjct: 37 REAVVVHGSPGIGKTSAAHALAADMGWETVELNASDQRTGDVIE-RFAGRAAKNATLAGS 95
Query: 371 RP-----KCLVIDEIDGALGD-GKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKK 424
+ +++DE D G+ +G + ++V KS++
Sbjct: 96 STGTSTRQLVILDEADNIHGNYDRGGASAVTRLV----KSSS------------------ 133
Query: 425 GCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSS 484
+P++ I N+ Y + R LR + F S +V L+ IC E + S
Sbjct: 134 --------QPIVLIANEFYDMS-RGLRNACQEIEFRDVSARSIVPVLRDICRKEGLAFES 184
Query: 485 IALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQK 544
AL +AE D+RS +N LQ + + +E + D+ V+G +D S F+ + ++
Sbjct: 185 DALDRIAEMNSGDLRSAVNDLQAIAEGREEITEEDV---VMGDRDRSVGLFEFLDAVLKE 241
>gi|383621832|ref|ZP_09948238.1| replication factor C large subunit [Halobiforma lacisalsi AJ5]
gi|448702682|ref|ZP_21700115.1| replication factor C large subunit [Halobiforma lacisalsi AJ5]
gi|445777243|gb|EMA28213.1| replication factor C large subunit [Halobiforma lacisalsi AJ5]
Length = 506
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 103/227 (45%), Gaps = 36/227 (15%)
Query: 313 VLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRP 372
+++ G PG+GKT+ AH A G+ V+E+NASD+R + IE + + ++
Sbjct: 39 AVIVHGSPGVGKTSAAHALANDMGWPVMELNASDNRQADVIERIAGEASKSGTLTGGGAG 98
Query: 373 KCLVI-DEIDGALGDGK-GAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKAS 430
+ LV+ DE D G+ G + ++V K A+
Sbjct: 99 RRLVVLDEADNFHGNADYGGSREVTRVV----------------------------KNAN 130
Query: 431 LLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTL 490
+P++ + N+ Y + +SLR + F S +V L+ IC E ++ AL +
Sbjct: 131 --QPIVLVANEFYDMS-QSLRNACETIEFRDVSKRSIVPVLRDICRREGVEFEEEALEKI 187
Query: 491 AEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
AE T D+RS +N LQ + ++ E L V D+ V +D + FD
Sbjct: 188 AESTSGDLRSAVNDLQAVAEEAERLTVEDV---VTSERDTTEGIFDF 231
>gi|448399879|ref|ZP_21571112.1| replication factor C large subunit [Haloterrigena limicola JCM
13563]
gi|445668332|gb|ELZ20962.1| replication factor C large subunit [Haloterrigena limicola JCM
13563]
Length = 493
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 108/238 (45%), Gaps = 38/238 (15%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS 370
++ +++ G PG+GKT+ AH A G+ V+E+NASD R + IE + + ++
Sbjct: 37 RQSVIVHGSPGVGKTSAAHALAADMGWPVMELNASDSRGADVIERIAGEAAKSGTLTGGE 96
Query: 371 RPKCLVI-DEIDGALG--DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCK 427
+ LVI DE D G D G+ EV + +A +
Sbjct: 97 AGRRLVILDEADNFHGNADYGGSREVTRVVKNANQ------------------------- 131
Query: 428 KASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIAL 487
P++ + N+ Y + +SLR + F S +V L+ IC E ++ AL
Sbjct: 132 ------PIVLVANEFYDMS-QSLRNACETIEFRDVSKRSIVPVLRDICRREDIEFEEEAL 184
Query: 488 TTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKR 545
+AE T D+RS +N LQ + ++ E L V D+ V +D + FD ++ +++
Sbjct: 185 AKIAESTSGDLRSAVNDLQAVAEETERLTVEDV---VTSERDTTEGIFDFLDDLIKEK 239
>gi|296083902|emb|CBI24290.3| unnamed protein product [Vitis vinifera]
Length = 941
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 132/345 (38%), Gaps = 109/345 (31%)
Query: 193 VVHEQL-WVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRH 251
+ H L W +KY P +++ ++ +++ WL W+ E+ L
Sbjct: 317 IGHASLTWTEKYKPKVPNDIIGNQSLVKQLHEWLAHWN------------EQFLHT---- 360
Query: 252 STISQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQ 311
T + KKQNDS +
Sbjct: 361 GTKGKGKKQNDSG---------------------------------------------AK 375
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIE----------NKILDVV 361
K +LL G PG+GKTT A + ++ G+ +EVNASD+R + + N I ++V
Sbjct: 376 KAVLLSGTPGIGKTTSAKLVSQMLGFQAIEVNASDNRGKANAKIDKGIGGSNANSIKELV 435
Query: 362 QMNSVMA----DSRPK-CLVIDEIDG-ALGDGKGAVEVILKMVSAERKSNTAKENVAKED 415
++ A PK L++DE+DG + GD G ++I + ++
Sbjct: 436 SNEALGAHMDRSKHPKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICI-------- 487
Query: 416 QPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHIC 475
CND Y+ L+SL + F +P+ ++ RL +
Sbjct: 488 -----------------------CNDRYSQKLKSLVNYCLLLSFRKPTKQQMAKRLLQVA 524
Query: 476 NNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDI 520
N E ++ + IAL LAE D+R LN LQ++ ++ D+
Sbjct: 525 NAEGLQVNEIALEELAERVNGDMRMALNQLQYMSLSMSVIKYDDV 569
>gi|383319999|ref|YP_005380840.1| replication factor C large subunit [Methanocella conradii HZ254]
gi|379321369|gb|AFD00322.1| replication factor C large subunit [Methanocella conradii HZ254]
Length = 533
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 156/398 (39%), Gaps = 69/398 (17%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS 370
++ ++L G PG+GKT+ A A G+ +E+NASD R+ I NK+ +
Sbjct: 63 KRAVILYGGPGVGKTSAALALAHDMGWDYIEMNASDQRTKDAI-NKVAGSASRTGTFGGA 121
Query: 371 RPK-CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKA 429
R + L++DE D G + +R +A +V K
Sbjct: 122 RERRLLILDEADNLHG-------------TYDRGGESAMISVIK---------------- 152
Query: 430 SLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTT 489
S +P++ I ND YA + + LR IA+ F S +V LK IC E ++ AL
Sbjct: 153 SSGQPIVLIANDYYALS-KQLRDIAEPIQFRPILSSSIVKVLKRICTEERIRCEPEALMK 211
Query: 490 LAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKR 549
+AE T D+RS +N LQ ++ + + D+ G +D+ S F + IF+ K+
Sbjct: 212 IAERTH-DLRSAINDLQAAAIGRDEVTLADV---TTGERDVPESIFKVIGLIFRGDDPKK 267
Query: 550 LRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLG 609
+V + + + EN+ + D + + + L
Sbjct: 268 ALRAVQDLDESPED----------------LVGWVDENLPRAYRDDDLE----RGFEALS 307
Query: 610 NSDLMHQYIMRTQQMPLYVYQPPLAITV------HRLVSQIQKPNLEWPKSYQRYRNAFM 663
+DL +MR Q ++ Y + + HR P P +Q+ A
Sbjct: 308 RADLFLGRVMRRQAYGMWRYASFMMVAGVNRARRHRYGGY---PGYSAPTYWQKLGRART 364
Query: 664 EKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHIL 701
+ + S SKI Y H S PLLH L
Sbjct: 365 ARA-VRDSLASKIGKYC--HTSKRE-ARAVYFPLLHAL 398
>gi|147919922|ref|YP_686325.1| replication factor C, large subunit [Methanocella arvoryzae MRE50]
gi|121687915|sp|Q0W3P4.1|RFCL_UNCMA RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|110621721|emb|CAJ36999.1| replication factor C, large subunit [Methanocella arvoryzae MRE50]
Length = 553
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 117/258 (45%), Gaps = 47/258 (18%)
Query: 302 KTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVV 361
+T TG +K ++L G PG+GKT+ A A G+ +E+NASD R+ I N+I
Sbjct: 37 ETFGTG---KKAVILYGGPGVGKTSAALALAHDMGWDYIELNASDVRTKDAI-NRIAGPA 92
Query: 362 QMNSVMADSRPKCLVI-DEIDGALGD-GKGAVEVILKMVSAERKSNTAKENVAKEDQPEK 419
M + + LVI DE D G+ +G I+ ++
Sbjct: 93 AMAGTFEGTGGRRLVILDEADNLHGNYDRGGEAAIINVI--------------------- 131
Query: 420 ISKKKGCKKASLLRPVICICNDLYA---PALRSLRQIAKVHVFIQPSVSRVVSRLKHICN 476
+ AS +PVI I ND+YA P S QI + + SV++V L+ +C
Sbjct: 132 -------RNAS--QPVILIANDMYAMSKPLRESALQI-QFRAILSTSVAKV---LRKVCA 178
Query: 477 NESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFD 536
NE +K AL +AE T D+RS +N LQ + + V D+ + G +D+ + F
Sbjct: 179 NEGLKCDPEALMKIAERTN-DLRSAINDLQAAAQGSGQVTVADVST---GDRDVPETIFK 234
Query: 537 IWKEIFQKRKTKRLRNSV 554
+ IF+ + + N+
Sbjct: 235 VMGMIFRGKNMREALNAT 252
>gi|356544778|ref|XP_003540824.1| PREDICTED: replication factor C subunit 1-like [Glycine max]
Length = 1112
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 125/339 (36%), Gaps = 108/339 (31%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
+W +KY P +++ ++ ++ WLK W+ E L + Q
Sbjct: 497 MWTEKYRPKDPKDIIGNQSLVLQLRNWLKAWN------------EHFLDTGNKK----QG 540
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
KKQNDS +K +LL
Sbjct: 541 KKQNDSGL---------------------------------------------KKAVLLS 555
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDR--SSSTIENKIL-------------DVVQ 362
G PG+GKTT A + + G+ +EVNASD R + S IE I + +
Sbjct: 556 GTPGIGKTTSATLVCQELGFQAIEVNASDSRGKADSKIEKGISGSKTNSVKELVTNEAIG 615
Query: 363 MNSVMADSRPKCLVIDEIDG-ALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKIS 421
+N + L++DE+DG + GD G ++I + ++
Sbjct: 616 INMGRSKHYKSVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICI-------------- 661
Query: 422 KKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMK 481
CND Y+ L+SL + F +P+ ++ RL + E ++
Sbjct: 662 -----------------CNDRYSQKLKSLVNYCLLLSFRKPTKQQMAKRLMDVAKAERLQ 704
Query: 482 TSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDI 520
+ IAL LAE D+R LN LQ++ I+N DI
Sbjct: 705 VNEIALEELAERVNGDMRMALNQLQYMSLSMSIINYDDI 743
>gi|351713292|gb|EHB16211.1| Replication factor C subunit 1 [Heterocephalus glaber]
Length = 1454
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 106/245 (43%), Gaps = 44/245 (17%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV----- 366
K LL GPPG+GKTT A + + GY VE+NASD RS ++++ + + + S+
Sbjct: 948 KAALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKNSLKAIVAESLNNTSIKGFYS 1007
Query: 367 -------MADSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPE 418
+ S L++DE+DG G + +G ++ ++ ++ +
Sbjct: 1008 SGAGGAEASVSAKHALIMDEVDGMAGTEDRGGIQELIGLI-----------------KHT 1050
Query: 419 KISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNE 478
KI P+IC+CND P +RSL F +P V ++ + I E
Sbjct: 1051 KI-------------PIICMCNDRNHPRIRSLVHYCFDLRFPRPRVEQIKGAMMSIAFKE 1097
Query: 479 SMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV-VGRKDMSRSAFDI 537
+K A+ + DIR L+ L + + L + +KD+ FD+
Sbjct: 1098 GLKIPPPAMNEIILGANQDIRQVLHNLSLWCARSKALTYDQAKADSHRAKKDIKLGPFDV 1157
Query: 538 WKEIF 542
+++F
Sbjct: 1158 ARKVF 1162
>gi|336363951|gb|EGN92318.1| hypothetical protein SERLA73DRAFT_79676 [Serpula lacrymans var.
lacrymans S7.3]
gi|336385927|gb|EGO27073.1| hypothetical protein SERLADRAFT_434847 [Serpula lacrymans var.
lacrymans S7.9]
Length = 978
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 92/206 (44%), Gaps = 42/206 (20%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIE------NKILDV----- 360
+ +++ G PG+GKTT AH+ AK G+ +E+NASD RS +E N LD
Sbjct: 462 RAVMVTGSPGIGKTTSAHLCAKLEGFTPIELNASDARSKKLVESGMNINNTSLDGWMGGN 521
Query: 361 VQMNSV-MADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEK 419
+N+V +A + CL++DE+DG +G V + ++
Sbjct: 522 SSINAVGVAITDKTCLIMDEVDGMSAGDRGGVGALNALI--------------------- 560
Query: 420 ISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNES 479
KK+ + P+ICI ND A L+ L F +P + V SR+ I E
Sbjct: 561 -------KKSKI--PIICIANDRNAQKLKPLLATTFNLPFRKPEATAVRSRMLTIAFKEK 611
Query: 480 MKTSSIALTTLAEYTECDIRSCLNTL 505
MK + + L + DIR LN L
Sbjct: 612 MKLPANVIDQLITGAQSDIRQVLNML 637
>gi|126178781|ref|YP_001046746.1| replication factor C large subunit [Methanoculleus marisnigri JR1]
gi|150415664|sp|A3CTR4.1|RFCL_METMJ RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|125861575|gb|ABN56764.1| replication factor C large subunit [Methanoculleus marisnigri JR1]
Length = 454
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 133/321 (41%), Gaps = 61/321 (19%)
Query: 310 EQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMAD 369
++K L+L G PG GKT+ A+ A + VVE+NASD R+ + +E ++ + ++
Sbjct: 35 QKKPLILYGKPGTGKTSSAYALANDMNWEVVELNASDQRTKAALE-RVAGAGSTTASLSG 93
Query: 370 SRPKCLVIDEIDGALGDG-KGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKK 428
+ K +++DE D G +G + I+++++A ++
Sbjct: 94 ASRKLILLDEADNLHGQADRGGAKAIVEIIAAAQQ------------------------- 128
Query: 429 ASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALT 488
P+I I ND Y+ R L+ + + F +V RL+ IC E + AL
Sbjct: 129 -----PIILIANDYYS-LTRELKAVTEPVQFRALQARSIVPRLRQICAAEGVACDPAALD 182
Query: 489 TLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQ-KRKT 547
+A D+R+ +N L KE L D+ + KD + F++ F+ KR
Sbjct: 183 DIANRAGGDMRAAVNMLYAAAIGKEHLAAGDVHTSA---KDERSTIFELVGATFKGKRDA 239
Query: 548 KRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDC 607
LR +V V + D + + G+ D H P + + C
Sbjct: 240 DLLRMAV----EVEDTPDAIEQWLE--GNLD---------------HMPDLASRAEGYAC 278
Query: 608 LGNSDLMHQYIMRTQQMPLYV 628
L +D +YI RT + Y
Sbjct: 279 LARAD---EYIGRTYRRQYYT 296
>gi|433638675|ref|YP_007284435.1| DNA polymerase III, gamma/tau subunit [Halovivax ruber XH-70]
gi|433290479|gb|AGB16302.1| DNA polymerase III, gamma/tau subunit [Halovivax ruber XH-70]
Length = 507
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 107/239 (44%), Gaps = 34/239 (14%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS 370
+K ++ G PG+GKT+ AH A + V+E+NASD R I+ + + ++ +
Sbjct: 37 RKAAIVHGSPGVGKTSAAHALAADMNWPVMELNASDHRGKDIIDRVAGEASKSGTLTGGT 96
Query: 371 RPKCLVI-DEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKA 429
+ LVI DE D G+ A+ + A +V K
Sbjct: 97 SGRRLVILDEADNFHGN-------------ADYGGSRAVTDVVK---------------- 127
Query: 430 SLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTT 489
S +P++ + N+ Y + SLR + F S +V L+ IC E ++ + AL
Sbjct: 128 SASQPIVLVANEFYDMS-NSLRNACETIEFRDVSTRSIVPVLRDICRKEGIEFEADALRA 186
Query: 490 LAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTK 548
+AE T D+RS +N LQ + + E L D+ V G +D + FD E+ +++ +
Sbjct: 187 IAENTSGDLRSAVNDLQAIAESTERLTEEDV---VTGSRDTTEGIFDYLDELIKEKDAE 242
>gi|312282245|dbj|BAJ33988.1| unnamed protein product [Thellungiella halophila]
Length = 933
Score = 81.3 bits (199), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 109/249 (43%), Gaps = 48/249 (19%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRS----------SSTIENKILDV 360
+K +L+ G PG+GKTT A + ++ G+ VEVNASD R + N + ++
Sbjct: 370 KKAVLMSGTPGIGKTTSAKLVSQMLGFQAVEVNASDSRGKANSNIAKGIGGSNANTVKEL 429
Query: 361 VQMNSVMAD----SRPK-CLVIDEIDG-ALGDGKGAVEVILKMVSAERKSNTAKENVAKE 414
V ++ A+ PK L++DE+DG + GD G ++I + ++
Sbjct: 430 VNNEAIAANIDRSKHPKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICI------- 482
Query: 415 DQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHI 474
CND Y+ L+SL F +P+ ++ RL HI
Sbjct: 483 ------------------------CNDRYSQKLKSLVNYCLPLNFRKPTKQQMAKRLTHI 518
Query: 475 CNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGR-KDMSRS 533
E ++ + IAL LAE DIR LN LQ++ ++ DI +++ KD S
Sbjct: 519 AKAEGLEVNEIALEELAERVNGDIRLALNQLQYMSLSMSVIKYDDIRQRLLSSAKDEDIS 578
Query: 534 AFDIWKEIF 542
F ++F
Sbjct: 579 PFTAVDKLF 587
>gi|448592930|ref|ZP_21651977.1| replication factor C large subunit [Haloferax elongans ATCC
BAA-1513]
gi|445730956|gb|ELZ82543.1| replication factor C large subunit [Haloferax elongans ATCC
BAA-1513]
Length = 487
Score = 81.3 bits (199), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 112/244 (45%), Gaps = 41/244 (16%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS 370
++ ++ G PG+GKT+ AH A G+ VE+NASD R++ IE + N+ +A S
Sbjct: 37 REAAIVHGSPGIGKTSAAHALAADMGWETVELNASDQRTADVIE-RFAGRAAKNATLAGS 95
Query: 371 RP-----KCLVIDEIDGALGD-GKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKK 424
+ +++DE D G+ +G I K+V KS++
Sbjct: 96 SAGTSTRQLVILDEADNIHGNYDRGGASAITKLV----KSSS------------------ 133
Query: 425 GCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSS 484
+P++ I N+ Y + R LR + F S +V L+ IC E ++ S
Sbjct: 134 --------QPIVLIANEFYDMS-RGLRNACREIEFRDVSARSIVPVLRDICRKEGVEFDS 184
Query: 485 IALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQK 544
AL +A+ D+RS +N LQ + + ++ + ++ V+G +D S F+ + ++
Sbjct: 185 AALERIADMNSGDLRSAVNDLQAIAEGRDQITEENV---VMGDRDRSVGLFEFLDAVLKE 241
Query: 545 RKTK 548
+ +
Sbjct: 242 KSAQ 245
>gi|145343745|ref|XP_001416472.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576697|gb|ABO94765.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 498
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 107/252 (42%), Gaps = 47/252 (18%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRS---------SSTIENKILDVV 361
+K +L+ G PG+GKTT A + + G+ + VNASD R + T+ + + + V
Sbjct: 58 RKAILISGAPGIGKTTSAILICRELGFQTMNVNASDSRGKTGAVSDGIAGTLASTVREFV 117
Query: 362 QMNSVMAD---SRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPE 418
++ D S L++DE+DG G +G + +++++ R
Sbjct: 118 TNRNIGIDGLRSTKTALIMDEVDGMAGGDRGGISELIEVIKHTRI--------------- 162
Query: 419 KISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNE 478
P+ICICND Y+ L++L F +P+ ++ L I ++
Sbjct: 163 ---------------PIICICNDRYSQKLKTLANYCVDLPFQRPNKLQLRKYLNQIVASQ 207
Query: 479 SMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIW 538
+ S A+ L E D+RS +N LQ + G + +KD++ S F
Sbjct: 208 RLDVDSDAVDALIEANNNDLRSSINQLQLWGMSSK-----HHGRNEISKKDVATSVFQAI 262
Query: 539 KEIFQKRKTKRL 550
+F+ K L
Sbjct: 263 DVLFRPSPLKTL 274
>gi|308800020|ref|XP_003074791.1| replication factor C 110 kDa subunit (ISS) [Ostreococcus tauri]
gi|116061331|emb|CAL52049.1| replication factor C 110 kDa subunit (ISS) [Ostreococcus tauri]
Length = 553
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 137/330 (41%), Gaps = 67/330 (20%)
Query: 310 EQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSS---------TIENKILDV 360
++K +L+ GPPG+GKTT A + K G + +NASD R S T+ + + +
Sbjct: 108 DRKCILISGPPGVGKTTTAVLLCKELGLQTLNINASDSRGKSGKVVDGIAGTLASAVREF 167
Query: 361 VQMNSVMADSRP---KCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
V + +DS L++DE+DG G +G + ++ ++ R
Sbjct: 168 VTNKCIGSDSEQTVRSALIMDEVDGMAGGDRGGLSELIDIIKQTRI-------------- 213
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
P+ICICND Y+ L++L F +P+ ++ + + N+
Sbjct: 214 ----------------PIICICNDRYSQKLKTLANYCVDLPFQRPNKLQIRKYVVQLANS 257
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
+ ++ ++ +L E D+RS +N LQ + +G+ ++ K+ SR D+
Sbjct: 258 KRLQIDQDSVDSLIEANNNDLRSIINQLQ----------LWSMGA-ILESKETSRVKKDV 306
Query: 538 WKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPV 597
+FQ R SV + + F H GD +F +HEN ++ D V
Sbjct: 307 SLGVFQAIDVM-FRPSVHGTLDARLSLSFTH------GDLLSLF--VHENYPCMRPKDSV 357
Query: 598 -----MLKTVKCLDCLGNSDLMHQYIMRTQ 622
++ + D+ I RTQ
Sbjct: 358 SDLQRLVHMAAAASRVSEGDVFASTISRTQ 387
>gi|448578044|ref|ZP_21643479.1| replication factor C large subunit [Haloferax larsenii JCM 13917]
gi|445726585|gb|ELZ78201.1| replication factor C large subunit [Haloferax larsenii JCM 13917]
Length = 487
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 111/241 (46%), Gaps = 41/241 (17%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS 370
++ ++ G PG+GKT+ AH A G+ VE+NASD R++ IE + N+ +A S
Sbjct: 37 REAAIVHGSPGIGKTSAAHALAADLGWETVELNASDQRTADVIE-RFAGRAAKNATLAGS 95
Query: 371 RP-----KCLVIDEIDGALGD-GKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKK 424
+ +++DE D G+ +G I K+V KS++
Sbjct: 96 SSGTSTRQLVILDEADNIHGNYDRGGASAITKLV----KSSS------------------ 133
Query: 425 GCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSS 484
+P++ I N+ Y + R LR + F S +V L+ IC E ++ S
Sbjct: 134 --------QPIVLIANEFYDMS-RGLRNACREIEFRDVSARSIVPVLRDICRKEGVEFES 184
Query: 485 IALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQK 544
AL +A+ D+RS +N LQ + + ++ + ++ V+G +D S F+ + ++
Sbjct: 185 AALERIADMNSGDLRSAVNDLQAIAEGRDQITEENV---VMGDRDRSVGLFEFLDAVLKE 241
Query: 545 R 545
+
Sbjct: 242 K 242
>gi|341582781|ref|YP_004763273.1| replication factor C large subunit [Thermococcus sp. 4557]
gi|340810439|gb|AEK73596.1| replication factor C large subunit [Thermococcus sp. 4557]
Length = 498
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 111/258 (43%), Gaps = 45/258 (17%)
Query: 298 SWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKI 357
+W PP++K L+L GPPG GKTT + A+ G+ V+E+NASD+R+ IE +
Sbjct: 31 AWIGAWLEGKPPKKKALILAGPPGTGKTTTVYALAREYGFEVIELNASDERTYEKIERYV 90
Query: 358 LDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
M+ + R K + +DE D + GA E I K++ R
Sbjct: 91 QAAYTMD--ILGKRRKLIFLDEADNI--EPTGARE-IAKLIDRARN-------------- 131
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAP--ALRSLRQIAKVHVFIQPSVSRVVSRLKHIC 475
P+I N + +RS QI + Q + + ++R+ H
Sbjct: 132 ----------------PIIMSANHYWEVPREIRSRSQIVEYKRLTQRDIIKALARILH-- 173
Query: 476 NNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAF 535
+E + L +A++ D+R+ +N LQ + + ++ +QV+ +D +S F
Sbjct: 174 -HEGKRVPKELLYDIAKHAGGDLRAAVNDLQTV-----VTGGVEDAAQVLAYRDTEKSVF 227
Query: 536 DIWKEIFQKRKTKRLRNS 553
+IF K+ R +
Sbjct: 228 QALAQIFATDNAKKARMA 245
>gi|448362195|ref|ZP_21550807.1| replication factor C large subunit [Natrialba asiatica DSM 12278]
gi|445649065|gb|ELZ02009.1| replication factor C large subunit [Natrialba asiatica DSM 12278]
Length = 511
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 103/236 (43%), Gaps = 38/236 (16%)
Query: 305 STGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMN 364
+T + +++ G PG+GKT+ AH A G+ V+E+NASD R + IE + +
Sbjct: 30 TTWDDHRDTVIVHGSPGVGKTSAAHALATDMGWPVMELNASDSRGADVIERIAGEAAKSG 89
Query: 365 SVMADSRPKCLVI-DEIDGALG--DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKIS 421
++ + LVI DE D G D G+ EV + SA
Sbjct: 90 TLTGGESGRRLVILDEADNFHGNADYGGSREVTRVVKSAN-------------------- 129
Query: 422 KKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMK 481
+P++ + N+ Y + +SLR + F S +V L+ IC E ++
Sbjct: 130 -----------QPIVLVANEFYDMS-QSLRNACETIEFRDVSKRSIVPVLRDICRREDIE 177
Query: 482 TSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
AL +AE T D+RS +N LQ + + + L V D+ V +D + FD
Sbjct: 178 FDEDALKKIAEATSGDLRSAVNDLQAVAEDADRLTVDDV---VTSERDTTEGIFDF 230
>gi|402466376|gb|EJW01882.1| hypothetical protein EDEG_03656 [Edhazardia aedis USNM 41457]
Length = 452
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 122/263 (46%), Gaps = 50/263 (19%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQM-NSVMADS 370
K LLLCG PG+GKT++ + + YH+VE NAS++R+ ++ +V + NS ++
Sbjct: 42 KFLLLCGSPGIGKTSIVYCISNMLNYHIVEYNASENRTIDLLK----QIVNLSNSNTLEN 97
Query: 371 RPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKAS 430
+ K ++IDEID D E+IL K+N+ K C
Sbjct: 98 KKKLILIDEIDNISKDYLFIKEIIL------------KQNIIK------------C---- 129
Query: 431 LLRPVICICNDLYAPALRSLR-QIAKVHVFIQP-SVSRVVSRLKHICNNESMKTSSIALT 488
PV+ CND Y LR + + V++F+ ++ ++ + + E ++ + A+
Sbjct: 130 ---PVVFCCNDFYNTPLRKYKSNLEIVNLFLNDLNIKNILGK---VIEKEHLEINEKAIN 183
Query: 489 TLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQ----- 543
L +++ D+R +N L L + +N ++ K + ++ F + +E+F+
Sbjct: 184 LLIQHSNKDLRHIINNLHVLSLRSRKIN----EKMILETKILHKNVFKLGEEVFKTNIKY 239
Query: 544 KRKTKRLRNSVSSSSNVSNEFDF 566
+ K N++SS + E F
Sbjct: 240 NNRAKHCFNTLSSIYSSGKELLF 262
>gi|242049958|ref|XP_002462723.1| hypothetical protein SORBIDRAFT_02g030910 [Sorghum bicolor]
gi|241926100|gb|EER99244.1| hypothetical protein SORBIDRAFT_02g030910 [Sorghum bicolor]
Length = 1025
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 128/338 (37%), Gaps = 108/338 (31%)
Query: 199 WVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNK 258
W +KY P +++ ++ +++ WLK WD+ S + + K
Sbjct: 411 WTEKYRPKVPNDIVGNQSMVKQLHDWLKSWDALFLHSGQKG----------------KGK 454
Query: 259 KQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCG 318
KQ DS+ +K +LL G
Sbjct: 455 KQADSA---------------------------------------------AKKAVLLSG 469
Query: 319 PPGLGKTTLAHVAAKHCGYHVVEVNASDDR--SSSTIE--------NKILDVVQMNSV-M 367
PPG+GKTT A V ++ G +EVNASD R + S IE N I +++ ++
Sbjct: 470 PPGIGKTTTAKVVSQMLGLQAIEVNASDSRGKADSKIEKGVGGSTSNSIKELISNATLNY 529
Query: 368 ADSRPK----CLVIDEIDG-ALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISK 422
D+R K L++DE+DG + GD G ++I + ++
Sbjct: 530 GDNRSKHPKAVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICIC-------------- 575
Query: 423 KKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKT 482
ND Y+ L+SL + F +P+ ++ RL I E ++
Sbjct: 576 -----------------NDRYSQKLKSLVNYCLMLNFRKPTKQQMGKRLMEIAKKEGIQA 618
Query: 483 SSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDI 520
A+ LAE DIR LN LQ++ + ++ DI
Sbjct: 619 QENAMEELAERVHGDIRMALNHLQYMSLSQSVVKYDDI 656
>gi|356517673|ref|XP_003527511.1| PREDICTED: replication factor C subunit 1-like [Glycine max]
Length = 947
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 125/339 (36%), Gaps = 108/339 (31%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQN 257
+W +KY P +++ ++ ++ WLK W+ E L + Q
Sbjct: 329 MWTEKYRPKDPKDIIGNQSLVLQLRNWLKAWN------------EHFLDTGNKK----QG 372
Query: 258 KKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLC 317
KKQNDS +K +LL
Sbjct: 373 KKQNDSGL---------------------------------------------KKAVLLS 387
Query: 318 GPPGLGKTTLAHVAAKHCGYHVVEVNASDDR--SSSTIENKIL-------------DVVQ 362
G PG+GKTT A + + G+ +EVNASD R + S IE I + +
Sbjct: 388 GTPGIGKTTSAKLVCQELGFQAIEVNASDSRGKADSKIEKGISGSKTNSVKELVTNEAIG 447
Query: 363 MNSVMADSRPKCLVIDEIDG-ALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKIS 421
+N + L++DE+DG + GD G ++I + ++
Sbjct: 448 VNMERSKHYKSVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICI-------------- 493
Query: 422 KKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMK 481
CND Y+ L+SL + F +P+ ++ RL + E ++
Sbjct: 494 -----------------CNDRYSQKLKSLVNYCLLLSFRKPTKQQMAKRLMDVSKAERLQ 536
Query: 482 TSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDI 520
+ IAL LAE D+R LN LQ++ ++N DI
Sbjct: 537 VNEIALEELAERVNGDMRMALNQLQYMSLSMSVINYDDI 575
>gi|448728046|ref|ZP_21710386.1| replication factor C large subunit [Halococcus morrhuae DSM 1307]
gi|445788712|gb|EMA39418.1| replication factor C large subunit [Halococcus morrhuae DSM 1307]
Length = 490
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 153/381 (40%), Gaps = 64/381 (16%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS 370
++ ++L G PG+GKT+ AH A + +E+NAS+ R+ S +E + + ++ S
Sbjct: 36 REAIVLHGAPGVGKTSAAHALAADMDWPTIELNASNQRTKSVVERVAGEAAKSGTLTGGS 95
Query: 371 RPKCLVI-DEIDGALGD-GKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKK 428
+ LVI DE D G+ +G I +V K+
Sbjct: 96 AGRRLVIMDEADNLHGNVDRGGSRAITGLV----------------------------KE 127
Query: 429 ASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALT 488
AS +P++ I N+ Y + +SLR + F S ++ L+ IC E + AL
Sbjct: 128 AS--QPMVLIANEFYDMS-KSLRNACETIEFRDVSARSILPVLRDICRREDVAYDDDALD 184
Query: 489 TLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTK 548
+AE D+R +N LQ L + E L V D+ V +D + FD + ++ +
Sbjct: 185 AIAERNSGDLRGAVNDLQALAESAETLTVDDV---VTSDRDKTTGIFDFLDALIKEEDAE 241
Query: 549 RLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCL 608
++ SS +V D L + I +N+ + D + D L
Sbjct: 242 ---GALRSSYDVDETPDDL-------------INWIEDNVPK----DYAGAELADAFDNL 281
Query: 609 GNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYR-NAFMEKMD 667
N+D + TQ + Y + + + E + RY ++ K+
Sbjct: 282 ANADRWLGRVRATQNYSYWRYAGDA------MTAGVAASRRESKGGWTRYGPPSYWSKLG 335
Query: 668 IFKSWHSKIPPYISRHLSTES 688
++ K YI+R ++T S
Sbjct: 336 RSRATRDK-RDYIARKIATTS 355
>gi|414591589|tpg|DAA42160.1| TPA: hypothetical protein ZEAMMB73_255627 [Zea mays]
Length = 985
Score = 80.5 bits (197), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 131/338 (38%), Gaps = 108/338 (31%)
Query: 199 WVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTISQNK 258
W +KY P +++ ++ +++ WLK WD+ S + + K
Sbjct: 370 WTEKYRPKVPNDIVGNQSMVKQLHDWLKSWDALFLHSGQKG----------------KGK 413
Query: 259 KQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCG 318
KQ DS+ +K +LL G
Sbjct: 414 KQTDSA---------------------------------------------AKKAVLLSG 428
Query: 319 PPGLGKTTLAHVAAKHCGYHVVEVNASDDR--SSSTIE--------NKILDVVQMNSV-M 367
PPG+GKTT A V ++ G +EVNASD R + S IE N I +++ ++
Sbjct: 429 PPGIGKTTTAKVVSQMLGLQAIEVNASDSRGKADSKIEKGVGGSTSNSIKELINNATLNY 488
Query: 368 ADSR---PKC-LVIDEIDG-ALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISK 422
+D+R PK LV+DE+DG + GD G ++I + ++
Sbjct: 489 SDNRLKHPKAVLVMDEVDGMSAGDRGGVADLIASIKISKIPIICI--------------- 533
Query: 423 KKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKT 482
CND Y+ L++L + F +P+ ++ RL I E ++
Sbjct: 534 ----------------CNDRYSQKLKNLVNYCLMLNFRKPTKQQMGKRLMEIAKKEGIQA 577
Query: 483 SSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDI 520
A+ LAE DIR LN LQ++ + ++ DI
Sbjct: 578 QENAMEELAERVHGDIRMALNHLQYMSLSQSVVKYDDI 615
>gi|61680955|pdb|1SXJ|A Chain A, Crystal Structure Of The Eukaryotic Clamp Loader
(Replication Factor C, Rfc) Bound To The Dna Sliding
Clamp (Proliferating Cell Nuclear Antigen, Pcna)
Length = 516
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 89/205 (43%), Gaps = 41/205 (20%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA--- 368
+ +L GPPG+GKTT AH+ A+ GY ++E NASD RS + + + + + SV+
Sbjct: 78 RAAMLYGPPGIGKTTAAHLVAQELGYDILEQNASDVRSKTLLNAGVKNALDNMSVVGYFK 137
Query: 369 --------DSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKI 420
+ + +++DE+DG G +G V + +
Sbjct: 138 HNEEAQNLNGKHFVIIMDEVDGMSGGDRGGVGQLAQF----------------------- 174
Query: 421 SKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESM 480
C+K S P+I ICN+ P +R ++ F +P + + SRL I E
Sbjct: 175 -----CRKTS--TPLILICNERNLPKMRPFDRVCLDIQFRRPDANSIKSRLMTIAIREKF 227
Query: 481 KTSSIALTTLAEYTECDIRSCLNTL 505
K + L + T DIR +N L
Sbjct: 228 KLDPNVIDRLIQTTRGDIRQVINLL 252
>gi|164658055|ref|XP_001730153.1| hypothetical protein MGL_2535 [Malassezia globosa CBS 7966]
gi|159104048|gb|EDP42939.1| hypothetical protein MGL_2535 [Malassezia globosa CBS 7966]
Length = 850
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 46/210 (21%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV----- 366
+ +L+ G PG+GKTT H+ GY +E+NASD RS +E+++ D + S+
Sbjct: 320 RAMLISGAPGIGKTTAVHLVCALEGYETLELNASDTRSKKLLESELSDTIHNRSIAGWTH 379
Query: 367 -----MADSRPK------CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKED 415
++ S P +++DE+DG G +G + I ++ RK+
Sbjct: 380 KQQPNVSTSGPDTKHDRLAIILDEVDGMSGGDRGGIGAINALI---RKTQV--------- 427
Query: 416 QPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHIC 475
P+ICICND P ++ L F +P+V + SR+ I
Sbjct: 428 ------------------PIICICNDRRHPKMQPLLATTFNMTFSKPTVQAIRSRMLSIA 469
Query: 476 NNESMKTSSIALTTLAEYTECDIRSCLNTL 505
E ++ + + L + D+R N L
Sbjct: 470 FREGLQIPAEVMDQLIIAAQSDLRLVTNML 499
>gi|429964312|gb|ELA46310.1| hypothetical protein VCUG_02198 [Vavraia culicis 'floridensis']
Length = 636
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 98/233 (42%), Gaps = 50/233 (21%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSR 371
K LL+ GPPG+GK+ +A K Y + E NASD R+ S++ ++ V + R
Sbjct: 208 KALLISGPPGVGKSLSVKLACKSTNYEMTEFNASDVRNKSSLTERVRQFVNCGCI--SGR 265
Query: 372 PKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASL 431
+ LV+DE DG GD +G + +++++ R
Sbjct: 266 RRVLVMDECDGMTGD-RGGIAELVQIIRDAR----------------------------- 295
Query: 432 LRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLA 491
PVICICND Y A+R L + + F + +++ R++ I E + +
Sbjct: 296 -MPVICICNDKY--AVRPLVNVCEEVTFRKLETRQILGRVRDIVREEGKDVKDKEIVEVC 352
Query: 492 EYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQK 544
D+R LN LQ V+ +K +SR+ FD +F +
Sbjct: 353 GMANNDMRYILNCLQ---------------GSVMYKKVVSRNLFDEVLALFGR 390
>gi|385303484|gb|EIF47556.1| subunit of a complex with ctf8p that shares some subunits with
replication factor c [Dekkera bruxellensis AWRI1499]
Length = 287
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA 368
P K++L+ GPPG GKT++AHV A GY V E+NASD+R+ + + ++ + +Q S+
Sbjct: 200 PYHKIMLIYGPPGTGKTSIAHVIANQLGYEVSEINASDERAGAEVRARVRNGLQNRSL-- 257
Query: 369 DSRPKCLVIDEIDGALGDG 387
+P CL+ DEIDGA G
Sbjct: 258 SGKPTCLIADEIDGASEQG 276
>gi|448369733|ref|ZP_21556285.1| replication factor C large subunit [Natrialba aegyptia DSM 13077]
gi|445650908|gb|ELZ03824.1| replication factor C large subunit [Natrialba aegyptia DSM 13077]
Length = 512
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 101/230 (43%), Gaps = 38/230 (16%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS 370
+ +++ G PG+GKT+ AH A G+ V+E+NASD R + IE + + ++
Sbjct: 37 RDAVIVHGSPGVGKTSAAHALASDMGWPVMELNASDSRGADVIERIAGEAAKSGTLTGGE 96
Query: 371 RPKCLVI-DEIDGALG--DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCK 427
+ LVI DE D G D G+ EV + SA
Sbjct: 97 SGRRLVILDEADNFHGNADYGGSREVTRVVKSAN-------------------------- 130
Query: 428 KASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIAL 487
+P++ + N+ Y + +SLR + F S +V L+ IC E ++ AL
Sbjct: 131 -----QPIVLVANEFYDMS-QSLRNACETIEFRDVSKRSIVPVLRDICRREDIEFEEEAL 184
Query: 488 TTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
+AE T D+RS +N LQ + + + L V D+ V +D + FD
Sbjct: 185 EKIAETTSGDLRSAVNDLQAVAEDTDRLTVDDV---VTSERDTTEGIFDF 231
>gi|300123536|emb|CBK24808.2| unnamed protein product [Blastocystis hominis]
Length = 463
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 107/234 (45%), Gaps = 37/234 (15%)
Query: 278 NFRNSNN-LEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCG 336
N RN N L ++N S K++R + + +L+ GPPG+GKTT V + G
Sbjct: 143 NIRNLYNWLLQWDTNHSSTSTSDTKRSRDSS----RAVLISGPPGIGKTTCVEVCCRQAG 198
Query: 337 YHVVEVNASDDRSSSTIENKILDVVQMNSVMADSR--PKCLVIDEIDGALGDGKGAVEVI 394
Y ++++NASD R+ S + + + D + + + + K +++DE+DG +G ++ +
Sbjct: 199 YELIQLNASDKRNMSFVRDTLKDSTSIIPLSFEKKRIRKAILMDEVDGMSSGDRGGIQEL 258
Query: 395 LKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIA 454
++++ + CICND + +RSL
Sbjct: 259 IRIIKITQIPII------------------------------CICNDDASAKVRSLSSYC 288
Query: 455 KVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFL 508
F +P +++ R++ IC+NE ++ S ++ +L D R LN LQ +
Sbjct: 289 YSLRFEKPLPMQMLPRVRFICHNERIQISDDSILSLVTSIGGDFRQILNHLQLV 342
>gi|341885495|gb|EGT41430.1| hypothetical protein CAEBREN_31074 [Caenorhabditis brenneri]
Length = 511
Score = 79.7 bits (195), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 105/250 (42%), Gaps = 54/250 (21%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV----- 366
K LL G G+GKTT A + +VE+NASD R+ +E KI ++ + +
Sbjct: 8 KAALLSGNSGVGKTTCATWLVNNSALKLVEMNASDVRNKKHLEAKIGELTGSHQIEEFFG 67
Query: 367 MADSRPK-------CLVIDEIDGALG--DGKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
+ S P+ L++DE+DG G D G E+I + KE +
Sbjct: 68 VKKSVPQDDSKVHHVLIMDEVDGMSGNQDRAGISELI---------------QIIKESKI 112
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
P+ICICND P +RSL F +P V + SR+ IC+
Sbjct: 113 ----------------PIICICNDRMHPKIRSLANYCYDLRFSKPRVETIRSRMMTICSQ 156
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
E +K S L L E + D+R + LQ K G++V +KD + FD
Sbjct: 157 EKVKISKEELDELIELSGHDVRQTIYNLQMRSKSS--------GAKVA-KKDQAWGPFDA 207
Query: 538 WKEIFQKRKT 547
+ + R T
Sbjct: 208 ARRLLDSRTT 217
>gi|312074341|ref|XP_003139927.1| ATPase [Loa loa]
gi|307764906|gb|EFO24140.1| ATPase [Loa loa]
Length = 885
Score = 79.7 bits (195), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 44/211 (20%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV----- 366
K ++L GPPG+GKTT A +A K VE NASD R+ +E + +V+ +
Sbjct: 373 KAVMLSGPPGVGKTTCAVMACKELKLRYVEKNASDVRNKKALEAQTSEVIGCEQIDDYFN 432
Query: 367 --------MADSRPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
++ L++DE+DG G D + + +++M+
Sbjct: 433 GSVAHKINTSNEITHVLIMDEVDGMSGNDDRAGIAELIQMI------------------- 473
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
K +L+ P+ICICND + +RSL F +P V ++ +RL I
Sbjct: 474 ----------KQTLI-PIICICNDRQSQKMRSLVNYCFDVRFQRPRVEQIRARLLTIACQ 522
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQFL 508
E +K + + E + D+R + LQ L
Sbjct: 523 EHLKVDKEEMDEIIEAAQHDVRQSIYNLQLL 553
>gi|448728943|ref|ZP_21711263.1| replication factor C large subunit [Halococcus saccharolyticus DSM
5350]
gi|445795991|gb|EMA46508.1| replication factor C large subunit [Halococcus saccharolyticus DSM
5350]
Length = 488
Score = 79.7 bits (195), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 101/229 (44%), Gaps = 36/229 (15%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS 370
++ ++L G PG+GKT+ AH A + +E+NASD R+ + +E + + ++ S
Sbjct: 37 REAVILHGAPGVGKTSAAHALAADMDWPTIELNASDQRTKAVVERVAGEAAKSGTLTGGS 96
Query: 371 RPKCLVI-DEIDGALGD-GKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKK 428
+ LV+ DE D G+ +G I +V K+ G
Sbjct: 97 AGRRLVVLDEADNLHGNVDRGGSRAITSLV-----------------------KEAG--- 130
Query: 429 ASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALT 488
+P++ I N+ Y + SLR + F S ++ L+ IC E ++ S AL
Sbjct: 131 ----QPMVLIANEFYDMS-NSLRNACETIEFRDVSARSILPVLRDICRREEVEYESEALE 185
Query: 489 TLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
+AE D+R +N LQ L + E L D+ V G +D + FD
Sbjct: 186 AIAESNSGDLRGAVNDLQALAEVNEQLTAEDV---VTGDRDRTTGIFDF 231
>gi|322368972|ref|ZP_08043539.1| replication factor C large subunit [Haladaptatus paucihalophilus
DX253]
gi|320551703|gb|EFW93350.1| replication factor C large subunit [Haladaptatus paucihalophilus
DX253]
Length = 488
Score = 79.7 bits (195), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 34/234 (14%)
Query: 313 VLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRP 372
++L G PG+GKT+ AH A G+ +E+NASD R+ ++ + + ++ +
Sbjct: 39 AVILHGSPGVGKTSAAHALANDMGWPTIELNASDQRTGDVVKRVAGEAAKSGTLTGGTAG 98
Query: 373 KCLVI-DEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASL 431
+ +VI DE D +A+R + A +V K S
Sbjct: 99 RRVVIMDEADNL-------------THNADRGGSRAITDVVK----------------SA 129
Query: 432 LRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLA 491
+P+I I N+ Y + SLR + F S +V L+ IC E+++ S AL +A
Sbjct: 130 NQPLILIANEFYDMS-NSLRNACETIEFRNVSARSIVPALRDICRQENIEYESEALEAIA 188
Query: 492 EYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKR 545
E D+RS +N LQ + L D+ V G +D + FD ++ +K+
Sbjct: 189 ENDSGDLRSAVNDLQAVATTNGKLTRDDV---VTGERDTTSGIFDFLDDLIKKQ 239
>gi|219113609|ref|XP_002186388.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209583238|gb|ACI65858.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 942
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 87/208 (41%), Gaps = 47/208 (22%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVV---------- 361
K LL GPPG+G T + AK G V+E NASD RS I++ + D+
Sbjct: 417 KAALLSGPPGIGTT----IVAKESGRDVIEFNASDVRSKKAIKDDMGDITGSYTLEFGKP 472
Query: 362 QMNSVMADSRPK-CLVIDEIDG-ALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEK 419
+N SR K C+++DE+DG GD G E+I +M+ R
Sbjct: 473 AINEKRQSSRIKRCIIMDEVDGMGAGDRSGMSELI-QMIKKSRV---------------- 515
Query: 420 ISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNES 479
P+ICICND + ++SL + +P+ S + +R I E
Sbjct: 516 --------------PIICICNDRQSQKMKSLLPYCMDLRYRRPTKSVIANRAVRIAAQEG 561
Query: 480 MKTSSIALTTLAEYTECDIRSCLNTLQF 507
A +AE D+R LN +Q
Sbjct: 562 FTVEQNAAEAIAESCGNDVRQVLNCMQM 589
>gi|389847870|ref|YP_006350109.1| replication factor C large subunit [Haloferax mediterranei ATCC
33500]
gi|448617850|ref|ZP_21666310.1| replication factor C large subunit [Haloferax mediterranei ATCC
33500]
gi|388245176|gb|AFK20122.1| replication factor C large subunit [Haloferax mediterranei ATCC
33500]
gi|445748218|gb|ELZ99668.1| replication factor C large subunit [Haloferax mediterranei ATCC
33500]
Length = 485
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 110/240 (45%), Gaps = 41/240 (17%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS 370
++ +++ G PG+GKT+ AH A G+ VE+NASD R+ IE + N+ ++ S
Sbjct: 37 REAVVVYGSPGIGKTSAAHALASDMGWETVELNASDQRTGDVIE-RFAGRAAKNATLSGS 95
Query: 371 RP-----KCLVIDEIDGALGD-GKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKK 424
+ +++DE D G+ +G + K+V KS++
Sbjct: 96 STGTSTRQLVILDEADNIHGNYDRGGSSAVTKLV----KSSS------------------ 133
Query: 425 GCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSS 484
+P++ I N+ Y + R LR + F S +V L+ IC E ++ S
Sbjct: 134 --------QPIVLIANEFYDMS-RGLRNACQEIEFRDVSARSIVPVLRDICRKEGLEFES 184
Query: 485 IALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQK 544
AL +A+ D+RS +N LQ + + ++ + D+ ++G +D S F+ + ++
Sbjct: 185 DALQAIADMNSGDLRSAVNDLQAIAEGRDKITEEDV---IMGDRDRSVGLFEFLDAVLKE 241
>gi|336252282|ref|YP_004595389.1| Replication factor C large subunit [Halopiger xanaduensis SH-6]
gi|335336271|gb|AEH35510.1| Replication factor C large subunit [Halopiger xanaduensis SH-6]
Length = 511
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 100/230 (43%), Gaps = 38/230 (16%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS 370
+ +++ G PG+GKT+ AH A G+ V+E+NASD R + IE + + ++
Sbjct: 37 RDAVIVHGSPGVGKTSAAHALAADMGWPVMELNASDSRGADVIERVAGEASKSGTLTGGE 96
Query: 371 RPKCLVI-DEIDGALG--DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCK 427
+ LVI DE D G D G+ EV + +A +
Sbjct: 97 SGRRLVILDEADNFHGNADYGGSREVTRVVKNANQ------------------------- 131
Query: 428 KASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIAL 487
P++ + N+ Y + SLR + F S +V L+ IC E ++ AL
Sbjct: 132 ------PIVLVANEFYDMS-NSLRNACETIEFRDVSKRSIVPVLRDICRREGVEFEEEAL 184
Query: 488 TTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
+AE T D+RS +N LQ + + E L V D+ V +D + FD
Sbjct: 185 EKIAESTSGDLRSAVNDLQAVAEDTERLTVDDV---VTSERDTTEGIFDF 231
>gi|374724606|gb|EHR76686.1| replication factor C large subunit [uncultured marine group II
euryarchaeote]
Length = 511
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 115/251 (45%), Gaps = 32/251 (12%)
Query: 307 GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV 366
G P++K +LL GPPG+GKT++A A+ G++V+E+NASD R+++ I S+
Sbjct: 39 GTPKKKAILLAGPPGVGKTSVARAIAQDLGWNVIELNASDARNAAAIRKAATQGSTHRSL 98
Query: 367 MADSRPK----CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISK 422
D K +++DE+D G L+ VS +R + A + + + K+
Sbjct: 99 FHDPSAKKQRTLILLDEVDHISGG--------LRAVSQDR-IDKAMQGADESGREVKLHG 149
Query: 423 KKGCKKASLL-------RPVICICNDLY-----APALRSLRQIAKVHVFI---QPSVSRV 467
G KA LL +PVI CN++ R+ R K H+ I + + +
Sbjct: 150 DSGG-KAELLHLLANTKQPVILACNEIMGLWGKGSTWRNTRDRFKPHLEIITFERASNEA 208
Query: 468 VSRL-KHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKE--ILNVMDIGSQV 524
+ R+ K + E++ A++ L D+R+ + LQ L + I M +
Sbjct: 209 LRRIAKRVLREENLDFDDAAVSALVTSNPGDLRALVRDLQVLASTAQGSITKAMVVAQAE 268
Query: 525 VGRKDMSRSAF 535
GR+D + F
Sbjct: 269 SGRRDTTLEVF 279
>gi|386001561|ref|YP_005919860.1| replication factor C large subunit [Methanosaeta harundinacea 6Ac]
gi|357209617|gb|AET64237.1| Replication factor C large subunit [Methanosaeta harundinacea 6Ac]
Length = 509
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 104/240 (43%), Gaps = 44/240 (18%)
Query: 298 SWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKI 357
SW + G PE++ ++L GP G+GKT+ A A+ G+ +E+NASD R+++ I
Sbjct: 34 SWER-----GIPEKRAVVLYGPAGVGKTSAALALAEEMGWDQIEMNASDSRTAAAISKVA 88
Query: 358 LDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKE-DQ 416
+M + R +++DE D G SA+R + A + KE DQ
Sbjct: 89 GAAARMMTFSGKKR--LVILDEADNLYG-------------SADRGGSAAMLRLVKEADQ 133
Query: 417 PEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICN 476
PV+ I ND Y + + LR+ F + + S V+S L+ IC
Sbjct: 134 -----------------PVVLIANDYYGLS-KPLREGTLGIQFRRITKSTVLSALREICR 175
Query: 477 NESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFD 536
E + + +A+ D+RS +N LQ + ++G +D S FD
Sbjct: 176 AEGAACTPELVEEIADMANGDLRSGINDLQ-----AALEGAREVGEVATAVRDAKASIFD 230
>gi|407464122|ref|YP_006775004.1| ATPase central domain-containing protein [Candidatus Nitrosopumilus
sp. AR2]
gi|407047310|gb|AFS82062.1| ATPase central domain-containing protein [Candidatus Nitrosopumilus
sp. AR2]
Length = 389
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 161/370 (43%), Gaps = 74/370 (20%)
Query: 289 NSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDR 348
N ++ W K + P LLL GPPG+GKTT+A++ AK GY ++ +NASD R
Sbjct: 21 NEEARAAITEWFVKWKKGTKP----LLLVGPPGIGKTTIAYLVAKQFGYDMIGLNASDVR 76
Query: 349 SSSTIENKILDVVQMN-SVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTA 407
S S I N+IL V N SVM + +DE+DG G G + +A
Sbjct: 77 SKSRI-NEILTPVLANVSVMGTP---MIFVDEVDGIHGRG-------------DYGGASA 119
Query: 408 KENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVF--IQPSVS 465
++ KE P++ N+ + ++S++++ K F I P +
Sbjct: 120 LVDILKEPTV----------------PIVLAANNDTSDKMKSIKKVVKTIQFKKIPPRLL 163
Query: 466 RVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVV 525
RV L++I +S K S ++ + + ++ DIRS +N Q S V
Sbjct: 164 RV--YLENILKKQSAKLSPGSIIKVIDKSKGDIRSMINLTQ---------------SLVT 206
Query: 526 GRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSL-ISNRGDYDVIFDGI 584
G + + F+ + N+ ++++ L+S+ I R +
Sbjct: 207 GFNPQTETT-------FENINVEDGVNAFFKANSIEEARIVLYSMQIDPREK----INAF 255
Query: 585 HENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQI 644
+ +I+ + + ++ K L+ + +D++ IM+TQ L Y + I +++ ++
Sbjct: 256 YSSIITSELDNSIL---AKYLEIISEADMLFGKIMKTQNWRLLRYLNDILIKLYQNDDRV 312
Query: 645 Q--KPNLEWP 652
+ + NL WP
Sbjct: 313 RYSQYNLSWP 322
>gi|448350301|ref|ZP_21539120.1| replication factor C large subunit [Natrialba taiwanensis DSM
12281]
gi|445637808|gb|ELY90956.1| replication factor C large subunit [Natrialba taiwanensis DSM
12281]
Length = 512
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 100/230 (43%), Gaps = 38/230 (16%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS 370
+ +++ G PG+GKT+ AH A G+ V+E+NASD R + IE + + ++
Sbjct: 37 RDAVIVHGSPGVGKTSAAHALANDMGWPVMELNASDSRGADVIERIAGEAAKSGTLTGGE 96
Query: 371 RPKCLVI-DEIDGALG--DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCK 427
+ LVI DE D G D G+ EV + SA
Sbjct: 97 SGRRLVILDEADNFHGNADYGGSREVTRVVKSAN-------------------------- 130
Query: 428 KASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIAL 487
+P++ + N+ Y + +SLR + F S +V L+ IC E ++ AL
Sbjct: 131 -----QPIVLVANEFYDMS-QSLRNACETIEFRDVSKRSIVPVLRDICRREDIEYEEEAL 184
Query: 488 TTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
+AE T D+RS +N LQ + + L V D+ V +D + FD
Sbjct: 185 EKIAETTSGDLRSAVNDLQAVAEDTGRLTVDDV---VTSERDTTEGIFDF 231
>gi|448739048|ref|ZP_21721068.1| replication factor C large subunit [Halococcus thailandensis JCM
13552]
gi|445800862|gb|EMA51210.1| replication factor C large subunit [Halococcus thailandensis JCM
13552]
Length = 491
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 153/381 (40%), Gaps = 64/381 (16%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS 370
++ ++L G PG+GKT+ AH A + +E+NAS+ R+ S +E + + ++ S
Sbjct: 36 REAVVLHGAPGVGKTSAAHALAADMDWPTIELNASNQRTKSVVERVAGEAAKSGTLTGGS 95
Query: 371 RPKCLVI-DEIDGALGD-GKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKK 428
+ LVI DE D G+ +G I +V K+
Sbjct: 96 AGRRLVIMDEADNLHGNVDRGGSRAITGLV----------------------------KE 127
Query: 429 ASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALT 488
AS +P++ I N+ Y + +SLR + F S ++ L+ IC E ++ AL
Sbjct: 128 AS--QPMVLIANEFYDMS-KSLRNACETIEFRDVSARSILPVLRDICRREEVEYDDEALD 184
Query: 489 TLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTK 548
+AE D+R +N LQ L + E L D+ V +D + FD + ++ +
Sbjct: 185 AIAERNSGDLRGAVNDLQALAESTERLTADDV---VTSDRDKTTGIFDFLDALIKEEDAE 241
Query: 549 RLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCL 608
++ SS +V D L + I +N+ + D + D L
Sbjct: 242 ---GALRSSYDVDETPDDL-------------INWIEDNVPK----DYAGAELADAFDNL 281
Query: 609 GNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYR-NAFMEKMD 667
N+D + TQ + Y + + + E + RY ++ K+
Sbjct: 282 ANADRWLGRVRATQNYSYWRYAGDA------MTAGVAASRRESKGGWTRYGPPSYWSKLG 335
Query: 668 IFKSWHSKIPPYISRHLSTES 688
++ K YI+R ++T S
Sbjct: 336 RSRATRDK-RDYIARQIATAS 355
>gi|170574641|ref|XP_001892902.1| ATPase, AAA family protein [Brugia malayi]
gi|158601324|gb|EDP38263.1| ATPase, AAA family protein [Brugia malayi]
Length = 970
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 44/211 (20%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQ-------MN 364
K ++L GPPG+GKTT A +A K VE NASD R+ +E + +++ +N
Sbjct: 456 KAVMLSGPPGVGKTTCAVMACKELKLRYVEKNASDVRNKKALEAQTSEIIGCEQIYDYVN 515
Query: 365 SVMADSR------PKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
+ R L++DE+DG G D + + +++M+
Sbjct: 516 GSVTRKRNTSSEITHVLIMDEVDGMSGNDDRAGIAELIQMI------------------- 556
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
K +L+ P+ICICND + +RSL F +P V ++ +RL I
Sbjct: 557 ----------KETLI-PIICICNDRQSQKMRSLVNYCFDIRFQRPRVEQIRARLLTIACQ 605
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQFL 508
E +K + + E + D+R + LQ L
Sbjct: 606 EHLKVDKEEMDEIIEAAQHDVRQSIYNLQLL 636
>gi|448305471|ref|ZP_21495401.1| replication factor C large subunit [Natronorubrum sulfidifaciens
JCM 14089]
gi|445588241|gb|ELY42485.1| replication factor C large subunit [Natronorubrum sulfidifaciens
JCM 14089]
Length = 494
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 105/230 (45%), Gaps = 38/230 (16%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS 370
++ +++ G PG+GKT+ AH A G+ +E+NASD+R + IE + + ++ A
Sbjct: 37 REAVIVHGSPGVGKTSAAHALANDLGWPAMELNASDNRQADVIERIAGEAAKSGTLTAGG 96
Query: 371 RPKCLVI-DEIDGALG--DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCK 427
+ LVI DE D G D G+ EV + +A
Sbjct: 97 AGRRLVILDEADNFHGNADYGGSREVTRVVKNAN-------------------------- 130
Query: 428 KASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIAL 487
+P++ + N+ Y + +SLR + F S +V L+ IC E ++ + AL
Sbjct: 131 -----QPIVLVANEFYDMS-QSLRNACETVEFRDVSKRSIVPVLRDICRREGIEFEAEAL 184
Query: 488 TTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
+A+ T D+RS +N LQ + ++ L V D+ V +D ++ FD
Sbjct: 185 KKIADATSGDLRSAVNDLQAVAEETSRLTVDDV---VTSERDTTQGIFDF 231
>gi|448652146|ref|ZP_21681159.1| replication factor C large subunit [Haloarcula californiae ATCC
33799]
gi|445769549|gb|EMA20623.1| replication factor C large subunit [Haloarcula californiae ATCC
33799]
Length = 508
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 102/238 (42%), Gaps = 36/238 (15%)
Query: 301 KKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDV 360
KK T ++ ++L G PG+GKT+ AH A G+ +E+NASD R+ I +
Sbjct: 26 KKWAETWDDHREAVILYGSPGIGKTSAAHALANDMGWPTIELNASDSRTKDVINRVAGEA 85
Query: 361 VQMNSVMADSRPKCLVI-DEIDGALGDG-KGAVEVILKMVSAERKSNTAKENVAKEDQPE 418
+ ++ A + LVI DE D G+ +G I +V
Sbjct: 86 AKSGTLTAGGGGRRLVIMDEADNIHGNADRGGARAITALV-------------------- 125
Query: 419 KISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNE 478
K+AS +P+I I N+ Y + LR + F S +V L+ +C E
Sbjct: 126 --------KEAS--QPMILIANEYYEMS-NGLRNNCQDIEFRDVSPRSIVPVLRDLCRQE 174
Query: 479 SMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFD 536
++ S AL LAE D+R + LQ + + E L D+ V G +D + F+
Sbjct: 175 GVEYESDALQELAEQNSGDLRGAVKDLQAIAETTERLTADDV---VTGERDTTEGIFE 229
>gi|222616174|gb|EEE52306.1| hypothetical protein OsJ_34316 [Oryza sativa Japonica Group]
Length = 929
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 105/237 (44%), Gaps = 64/237 (27%)
Query: 296 QDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDR--SSSTI 353
Q KK +G +K +LL GPPG+GKTT A V ++ G +EVNASD R + S I
Sbjct: 437 QKGKGKKQADSG--AKKAVLLSGPPGIGKTTTAKVVSQMLGLQAIEVNASDSRGKADSKI 494
Query: 354 E--------NKILDVVQMNSVMADS-----RPKC-LVIDEIDG-ALGDGKGAVEVILKMV 398
E N I +++ N+ + S RPK LV+DE+DG + GD G ++I +
Sbjct: 495 EKGVGGSTSNSIKELIS-NATLNYSNNRLKRPKAVLVMDEVDGMSAGDRGGVADLIASI- 552
Query: 399 SAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHV 458
K+SK P+ICICND Y+ L+SL +
Sbjct: 553 --------------------KMSK----------IPIICICNDRYSQKLKSLVNYCLLLN 582
Query: 459 FIQPSVSRVVSRLKHICNNESMK-------------TSSIALTTLAEYTECDIRSCL 502
F +P+ ++ RL I E ++ + SI L ++ C+ R L
Sbjct: 583 FRKPTKQQMGKRLMEIAKKEGLQAQECIRSAIEPAVSGSIICGFLDDFIICNARVGL 639
>gi|345317729|ref|XP_003429922.1| PREDICTED: chromosome transmission fidelity protein 18 homolog,
partial [Ornithorhynchus anatinus]
Length = 521
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Query: 450 LRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFL- 508
LRQ + F Q SR+V RL+ I + MK AL TL E TE DIRSC+NTLQFL
Sbjct: 1 LRQQCFLLNFPQTQPSRLVHRLQEISALQGMKADVGALMTLCEKTENDIRSCINTLQFLH 60
Query: 509 DKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKRLR 551
+ K L+V + + VG KD + F +W+EIFQ + +R R
Sbjct: 61 GRGKRELSVRMLQTMKVGLKDQKKGLFSLWQEIFQLPRVQRQR 103
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 156/392 (39%), Gaps = 57/392 (14%)
Query: 557 SSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQ 616
S S+ F + L ++ G+++ I G++EN L ++ D + LD L D + +
Sbjct: 185 SHGTSHRFHHILHLTTSTGEHEKISQGLYENFLNMKLKDSSLGTVCLALDWLQFEDTLDR 244
Query: 617 YIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKI 676
+ Q L Y P L + H L + P + +P S + + ++ S S +
Sbjct: 245 TVRHGQHFQLMRYLPFLPVAFHLLFAATSVPRIAYPSSQFEALSRKNQMQNLILSMVSGV 304
Query: 677 PPYISRHLSTESLVEDSISPLLHILSPPTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTY 736
+ LV +++ LL I+S P LRP+ L S+KEK LA L+S M+S++LTY
Sbjct: 305 TAVARSRAGPQVLVLEALCLLLDIIS-PKLRPINTQLYSSKEKQQLAGLISTMLSFNLTY 363
Query: 737 KNTKSDPLLNNLGNEVSHDVSTLSFDPPINEFITFKGYRSNHYVLALAVKQVLVHEVEKQ 796
L + + DP + F + L KQ++ E+E +
Sbjct: 364 -----------LQERTADGQYVYTLDPNVEAVCRFPDLPARKQ-LTYQAKQLIAREIELE 411
Query: 797 RIMQVTIGKSEHLADGYKENMDLAGEE--DSKTESAKTNNAAVSAKLIEKSKSLPYSRQC 854
++ ++E + AGE+ + + + A + EK ++ + R+
Sbjct: 412 KMR-----RTEAALQARNPSQPAAGEKAGSGRNHEQRLKHIIQRAVVDEKPETDFFGRKI 466
Query: 855 NPSTSTVLTTLDSSRSSTASVKPKSSGDTKKSFRSSSSFFDRFRKLSGKVSQDNDNAVQK 914
A+ P+S ++ D K GK +D
Sbjct: 467 V--------------RKAATPGPESRAAAEQ---------DPGAKRIGKAVGHSD----- 498
Query: 915 ATVERDSLPLLFKFNEGFTNAVKRPVRMRDFL 946
+ F+FNEG +NAV+R V +RD +
Sbjct: 499 ---------VWFRFNEGVSNAVRRSVYVRDLM 521
>gi|354610609|ref|ZP_09028565.1| Replication factor C large subunit [Halobacterium sp. DL1]
gi|353195429|gb|EHB60931.1| Replication factor C large subunit [Halobacterium sp. DL1]
Length = 495
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 138/326 (42%), Gaps = 56/326 (17%)
Query: 306 TGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNS 365
T + +L G PG+GKT+ AH A G+ VVE+NASD R++ +E + + +
Sbjct: 32 TWADHGEAAILHGSPGIGKTSAAHALAADEGWDVVELNASDQRTADVVERVAGEAAKSGT 91
Query: 366 VMADSRPKCLVI-DEIDGALGD-GKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKK 423
+ S + LV+ DE D G+ +G I ++V
Sbjct: 92 LTGGSGGRKLVVMDEADNLHGNVDRGGSAAITRLV------------------------- 126
Query: 424 KGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTS 483
K+A+ +P++ I N+ Y + +R + F S +V L+ IC E +
Sbjct: 127 ---KEAT--QPIVLIANEYYDMS-NGVRNACRDIEFRDVSKRSIVPVLRDICRREDVAYD 180
Query: 484 SIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQ 543
AL +AE D+RS +N LQ L + L V D+ V+G +D S FD +
Sbjct: 181 DEALEAIAEQNSGDLRSAVNDLQALAETSRKLTVDDV---VMGERDRSEGVFDFLDALI- 236
Query: 544 KRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVK 603
KT ++++ ++ +V D L + + +N+ + Y + + +
Sbjct: 237 --KTHGAQDALEAAYDVDETPDDL-------------INWVEDNVPKDYYGEELAV---- 277
Query: 604 CLDCLGNSDLMHQYIMRTQQMPLYVY 629
+ L N+D+ + TQ+ + Y
Sbjct: 278 AYEFLSNADVWLGRVRATQEYSYWRY 303
>gi|22326948|ref|NP_680188.1| replication factor C1 [Arabidopsis thaliana]
gi|13374860|emb|CAC34494.1| replication factor C large subunit-like protein [Arabidopsis
thaliana]
gi|48958527|gb|AAT47816.1| At5g22010 [Arabidopsis thaliana]
gi|332005585|gb|AED92968.1| replication factor C1 [Arabidopsis thaliana]
Length = 956
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 109/249 (43%), Gaps = 48/249 (19%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRS----------SSTIENKILDV 360
+K +LL G PG+GKTT A + ++ G+ VEVNASD R + N + ++
Sbjct: 393 KKAVLLSGTPGIGKTTSAKLVSQMLGFQAVEVNASDSRGKANSNIAKGIGGSNANSVKEL 452
Query: 361 VQMNSVMAD----SRPK-CLVIDEIDG-ALGDGKGAVEVILKMVSAERKSNTAKENVAKE 414
V ++ A+ PK L++DE+DG + GD G ++I + ++
Sbjct: 453 VNNEAMAANFDRSKHPKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICI------- 505
Query: 415 DQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHI 474
CND Y+ L+SL + +P+ ++ RL HI
Sbjct: 506 ------------------------CNDRYSQKLKSLVNYCLPLNYRKPTKQQMAKRLMHI 541
Query: 475 CNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGR-KDMSRS 533
E ++ + IAL LAE DIR +N LQ++ ++ DI +++ KD S
Sbjct: 542 AKAEGLEINEIALEELAERVNGDIRLAVNQLQYMSLSMSVIKYDDIRQRLLSSAKDEDIS 601
Query: 534 AFDIWKEIF 542
F ++F
Sbjct: 602 PFTAVDKLF 610
>gi|297620228|ref|YP_003708333.1| AAA ATPase central domain-containing protein [Methanococcus voltae
A3]
gi|297379205|gb|ADI37360.1| AAA ATPase central domain protein [Methanococcus voltae A3]
Length = 510
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 137/331 (41%), Gaps = 67/331 (20%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS 370
K LLL GPPG GKTTLA+ A + V+E+NASD R+ + I+ + S+
Sbjct: 39 HKPLLLAGPPGCGKTTLAYALANDYNFEVIELNASDKRNKNVIQQVVGTAAVSKSL--SG 96
Query: 371 RPKCLVIDEIDGALG-DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKA 429
R +++DE+DG G D +G V I+K+ + TAK
Sbjct: 97 RRSLIILDEVDGLSGNDDRGGVSEIIKV------AKTAK--------------------- 129
Query: 430 SLLRPVICICNDLYAPALRSLR------QIAKVHVFIQPSVSRVVSRLKHICNNESMKTS 483
P+I ND Y L +LR ++ VH P V L+ I E +
Sbjct: 130 ---NPIILTANDPYKLNLSTLRNSVHLVNVSSVHTNSIPPV------LRKIALQEGYEVD 180
Query: 484 SIALTTLAEYTECDIRSCLNTLQ-FLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIF 542
A+ +A + D+R+ +N L+ L + + D+ + + +D + FD +
Sbjct: 181 PKAIKMIASHASGDLRAAINDLESLLIGRTSPMETEDVRN--LADRDSKGNIFDAVRIAL 238
Query: 543 QKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTV 602
KT +VS++ ++ NE D I + + ENI + +Y P +
Sbjct: 239 ---KTTHYDIAVSTTRDL-NE------------DIGTIQEWLAENIPR-EYQKP--HEIA 279
Query: 603 KCLDCLGNSDLMHQYIMRTQQMPLYVYQPPL 633
K D + SD+ + R Q + Y L
Sbjct: 280 KAYDYISKSDIYLGRVYRRQHFGFWKYASAL 310
>gi|297812313|ref|XP_002874040.1| AAA-type ATPase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297319877|gb|EFH50299.1| AAA-type ATPase family protein [Arabidopsis lyrata subsp. lyrata]
Length = 960
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 108/249 (43%), Gaps = 48/249 (19%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRS----------SSTIENKILDV 360
+K +LL G PG+GKTT A + ++ G+ VEVNASD R + N + ++
Sbjct: 397 KKAVLLSGTPGIGKTTSAKLVSQMLGFQAVEVNASDSRGKANSNIAKGIGGSNANTVKEL 456
Query: 361 VQMNSVMAD----SRPK-CLVIDEIDG-ALGDGKGAVEVILKMVSAERKSNTAKENVAKE 414
V ++ A+ PK L++DE+DG + GD G ++I + ++
Sbjct: 457 VNNEAMAANLDRSKHPKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICI------- 509
Query: 415 DQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHI 474
CND Y+ L+SL + +P+ ++ RL HI
Sbjct: 510 ------------------------CNDRYSQKLKSLVNYCLPLNYRKPTKQQMAKRLMHI 545
Query: 475 CNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGR-KDMSRS 533
E ++ + IAL LAE DIR LN LQ++ + DI +++ KD S
Sbjct: 546 AKAEGLEINEIALEELAERVNGDIRLALNQLQYMSLSMSAIKYDDIRQRLLSSAKDEDIS 605
Query: 534 AFDIWKEIF 542
F ++F
Sbjct: 606 PFTAVDKLF 614
>gi|258565361|ref|XP_002583425.1| hypothetical protein UREG_06392 [Uncinocarpus reesii 1704]
gi|237907126|gb|EEP81527.1| hypothetical protein UREG_06392 [Uncinocarpus reesii 1704]
Length = 729
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 85/203 (41%), Gaps = 41/203 (20%)
Query: 301 KKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENK---I 357
KK G + +++ GPPG+GKTT AH+ AK Y VVE NASD RS ++ I
Sbjct: 211 KKPGKDGSGIYRAVMIHGPPGIGKTTAAHLVAKLENYDVVETNASDTRSKKLLDEGLRGI 270
Query: 358 LDVVQMNSVMADSRPKC--------LVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKE 409
LD + + K L++DE+DG M + +R A
Sbjct: 271 LDTTSLQGYFSGEGKKVDGGKKNLVLIMDEVDG--------------MSAGDRGGVGALA 316
Query: 410 NVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVS 469
VAK+ + P+I ICN+ P +R + F +P+ ++ S
Sbjct: 317 AVAKKTRI----------------PIIMICNERRLPKMRPFDHVTYELPFRRPTADQMRS 360
Query: 470 RLKHICNNESMKTSSIALTTLAE 492
RL IC E +K L L E
Sbjct: 361 RLSTICFREGLKIPPQVLDGLIE 383
>gi|296108938|ref|YP_003615887.1| ATPase AAA [methanocaldococcus infernus ME]
gi|295433752|gb|ADG12923.1| AAA ATPase central domain protein [Methanocaldococcus infernus ME]
Length = 483
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 92/201 (45%), Gaps = 35/201 (17%)
Query: 310 EQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMAD 369
++K +LL GPPG+GKTTLA+ A G+ V+E+NASD RS I I S++ +
Sbjct: 38 KEKPILLYGPPGVGKTTLAYALANDYGFDVIELNASDRRSREEIRRIIGQSAVSKSILGN 97
Query: 370 SRPKCLVIDEIDGALG--DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCK 427
+V+DE+DG G D G E+I +AKE +
Sbjct: 98 RF--IIVLDEVDGISGKEDAGGVGELI---------------KIAKESK----------- 129
Query: 428 KASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIAL 487
P+I ND Y+P L++L ++ V+ + LK I E + L
Sbjct: 130 -----NPIIMTANDAYSPNLKNLLPHVELIELKPLKVNEIYKILKAIAEKEGLDVDDKVL 184
Query: 488 TTLAEYTECDIRSCLNTLQFL 508
+A ++ D+RS +N LQ L
Sbjct: 185 KVIASHSAGDLRSAINDLQAL 205
>gi|448311841|ref|ZP_21501594.1| replication factor C large subunit [Natronolimnobius
innermongolicus JCM 12255]
gi|445603462|gb|ELY57424.1| replication factor C large subunit [Natronolimnobius
innermongolicus JCM 12255]
Length = 507
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 113/271 (41%), Gaps = 53/271 (19%)
Query: 277 GNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCG 336
GN + +NLE W K T + +++ G PG+GKT+ AH A G
Sbjct: 18 GNNKARDNLE-----------QWAK----TWDDHRDAVIVHGSPGVGKTSAAHALASDMG 62
Query: 337 YHVVEVNASDDRSSSTIENKILDVVQMNSVMADSRPKCLVI-DEIDGALG--DGKGAVEV 393
+ V+E+NASD R + IE + + ++ + LVI DE D G D G+ EV
Sbjct: 63 WPVMELNASDSRGADVIERVAGEAAKSGTLTGGEAGRRLVILDEADNFHGNADYGGSAEV 122
Query: 394 ILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQI 453
+ A +P++ + N+ Y + +SLR
Sbjct: 123 TRVVKDAN-------------------------------QPIVLVANEFYDMS-QSLRNA 150
Query: 454 AKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKE 513
+ F S +V L+ IC E ++ AL +A T D+RS +N LQ + + +
Sbjct: 151 CETIEFRDVSKRSIVPVLRDICRREGIEFEEDALEKIAADTSGDLRSAVNDLQAVAEDTD 210
Query: 514 ILNVMDIGSQVVGRKDMSRSAFDIWKEIFQK 544
L V D+ V ++D + FD + ++
Sbjct: 211 RLTVDDV---VTSQRDTTEGIFDFLDTVIKE 238
>gi|407461774|ref|YP_006773091.1| ATPase central domain-containing protein [Candidatus Nitrosopumilus
koreensis AR1]
gi|407045396|gb|AFS80149.1| ATPase central domain-containing protein [Candidatus Nitrosopumilus
koreensis AR1]
Length = 385
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 102/221 (46%), Gaps = 42/221 (19%)
Query: 289 NSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDR 348
N ++ + W K + P LLL GPPG+GKTT+A + AK GY ++ +NASD R
Sbjct: 17 NEETRSVIMEWFAKWKKGTKP----LLLVGPPGIGKTTIAFLVAKQFGYDMIGLNASDVR 72
Query: 349 SSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALGDGK-GAVEVILKMVSAERKSNTA 407
S S I N+IL V + +V P V DE+DG G G G V ++
Sbjct: 73 SKSRI-NEILTPV-LGNVSVLGTPMIFV-DEVDGIHGRGDYGGVAALV------------ 117
Query: 408 KENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVF--IQPSVS 465
++ KE P+I ND A ++++++ K+ F I P +
Sbjct: 118 --DILKEPTV----------------PIILAANDDSADKMKNIKKAVKIISFKKIPPRLL 159
Query: 466 RVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQ 506
RV L++I E+ S +L + + + DIRS +N Q
Sbjct: 160 RV--YLENILKKENANLSPGSLIKVIDKSRGDIRSMINLTQ 198
>gi|409096242|ref|ZP_11216266.1| replication factor C large subunit [Thermococcus zilligii AN1]
Length = 498
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 134/332 (40%), Gaps = 67/332 (20%)
Query: 298 SWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKI 357
+W + PP++K L+L GPPG GKTT + A G+ V+E+NASD+R+ IE +
Sbjct: 31 AWVEAWLHGNPPKKKALVLAGPPGCGKTTTVYALANEYGFEVIELNASDERTYEKIERYV 90
Query: 358 LDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
M+ ++ SR K + +DE D G + V++ ++ N
Sbjct: 91 QAAYTMD-ILGKSR-KLIFLDEADNIEPSGAKEIAVLI-----DKARN------------ 131
Query: 418 EKISKKKGCKKASLLRPVICICNDLY-AP-ALRSLRQIAKVHVFIQPSVSRVVSRLKHIC 475
P+I N + P +R+ QI + Q + + ++R+ H+
Sbjct: 132 ----------------PIIMAANHYWEVPWEIRAKAQIVEYKRLTQGDIVKALARILHM- 174
Query: 476 NNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAF 535
E + L +A++ D+R+ +N LQ + + ++ V+ +D +S F
Sbjct: 175 --EKITVPKEVLYDIAKHANGDLRAAINDLQTV-----VTGGVEDAQDVLAYRDTEKSVF 227
Query: 536 DIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHD 595
++F ++ R ++ +E + I EN+ Y
Sbjct: 228 QALAQVFATDNARKARLAILGVDMFPDE----------------LLQWISENV---PYAY 268
Query: 596 PVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLY 627
P + + L +D+ Y+ R Q+ +Y
Sbjct: 269 PRPEDIARAYEALSRADI---YLGRAQRTGVY 297
>gi|118576833|ref|YP_876576.1| replication factor C/ATPase involved in DNA replication
[Cenarchaeum symbiosum A]
gi|118195354|gb|ABK78272.1| replication factor C/ATPase involved in DNA replication
[Cenarchaeum symbiosum A]
Length = 386
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 101/223 (45%), Gaps = 42/223 (18%)
Query: 289 NSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDR 348
N ++ W K + P +LL GPPG GKTT+A++AAK GY V+ +NASD R
Sbjct: 18 NEEARAALSGWFSKWKKGTKP----VLLVGPPGTGKTTVANLAAKAHGYDVISLNASDAR 73
Query: 349 SSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALGDGK-GAVEVILKMVSAERKSNTA 407
S S I N++L V N + S + IDE+DG G G E ++K++
Sbjct: 74 SKSRI-NEVLSPVLGNVSVLGS--PMIFIDEVDGIHGRSDFGGAEALIKIL--------- 121
Query: 408 KENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVF--IQPSVS 465
KE P++ N +P ++S+++ +K+ F + P +
Sbjct: 122 KEPAV---------------------PIVLAANSDASPKMKSIKKTSKLIPFRPLPPRLM 160
Query: 466 RVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFL 508
RV L+ + + E S A + + DIRS LN Q L
Sbjct: 161 RVY--LRKVLSEEGASLSPGAEIKVISESRGDIRSMLNLAQSL 201
>gi|448734127|ref|ZP_21716354.1| replication factor C large subunit [Halococcus salifodinae DSM
8989]
gi|445800636|gb|EMA50985.1| replication factor C large subunit [Halococcus salifodinae DSM
8989]
Length = 493
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 141/350 (40%), Gaps = 62/350 (17%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSR 371
+ ++L G PG+GKT+ AH A + +E+NASD R+ + +E + + ++
Sbjct: 38 EAVILHGAPGVGKTSAAHALAADMDWPTIELNASDQRTKAVVERIAGEAAKSGTLTEGGA 97
Query: 372 PKCLVI-DEIDGALGD-GKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKA 429
+ LV+ DE D G+ +G I +V K+ G
Sbjct: 98 GRRLVVMDEADNLHGNVDRGGSRAITSLV-----------------------KEAG---- 130
Query: 430 SLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTT 489
+P+I I N+ Y + SLR + F ++ L+ IC E ++ S AL
Sbjct: 131 ---QPMILIANEFYDMS-NSLRNACETIEFRDVGARSILPVLRDICRREDVEYESDALEA 186
Query: 490 LAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKRKTKR 549
+AE D+R +N LQ L + E L + V G +D + FD + ++ +
Sbjct: 187 IAEANSGDLRGAVNDLQALAEVNEKLTAEAV---VTGDRDRTTGIFDFLDALIKEEDAE- 242
Query: 550 LRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPVMLKTVKCLDCLG 609
+++ SS +V D L + I E+ + +H P + D L
Sbjct: 243 --SALRSSYDVDETPDDLINWI--------------EDNVPKDFHGPEL---ADAYDNLA 283
Query: 610 NSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNLEW----PKSY 655
N+D + TQ + Y A+T + + ++P W P SY
Sbjct: 284 NADRWLGRVRATQDYSYWRYAGD-AMTAG-VAAARREPKGGWTRYGPPSY 331
>gi|313125638|ref|YP_004035908.1| replication factor c large subunit [Halogeometricum borinquense DSM
11551]
gi|448285477|ref|ZP_21476720.1| replication factor C large subunit [Halogeometricum borinquense DSM
11551]
gi|312292003|gb|ADQ66463.1| replication factor C large subunit [Halogeometricum borinquense DSM
11551]
gi|445576733|gb|ELY31183.1| replication factor C large subunit [Halogeometricum borinquense DSM
11551]
Length = 487
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 140/345 (40%), Gaps = 76/345 (22%)
Query: 299 WHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKIL 358
W K T ++ ++L G PG+GKT+ AH A G+ VE+NASD R++ IE +
Sbjct: 29 WGK----TWDDHREAVVLHGAPGVGKTSAAHALANDMGWETVELNASDQRTADVIE-RFA 83
Query: 359 DVVQMNSVMADSRP----------KCLVIDEIDGALGD-GKGAVEVILKMVSAERKSNTA 407
MN+ +A + + +++DE D G+ +G I ++V +KSN
Sbjct: 84 GRAAMNTTLAGASAGDANGEREGRQLVIMDEADNIHGNYDRGGAGAITRLV---KKSN-- 138
Query: 408 KENVAKEDQPEKISKKKGCKKASLLRPVICICNDLY--APALRSL-RQIAKVHVFIQPSV 464
+P++ I N+ Y + LRS R+I F S
Sbjct: 139 -------------------------QPIVLIANEYYDMSSGLRSATREIE----FRDVSA 169
Query: 465 SRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV 524
+V L+ I E ++ S AL +AE D+RS + LQ + L V D+ V
Sbjct: 170 RSIVPVLRDILRKEGIEFDSDALDRIAETNSGDLRSAVKDLQAAADGADRLTVEDV---V 226
Query: 525 VGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGI 584
G +D + F+ + K ++++ S+ V D I
Sbjct: 227 TGSRDKAIGLFEYIDSVL---KEDTAQDAIQSAYAVDETPDDQVKWI------------- 270
Query: 585 HENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVY 629
E+ + + Y D + + + L N+D+ +M TQ + Y
Sbjct: 271 -EDKVSMVYDDDEL---ARAYEFLANADVWLGRVMATQDYSYWRY 311
>gi|448358570|ref|ZP_21547250.1| replication factor C large subunit [Natrialba chahannaoensis JCM
10990]
gi|445645719|gb|ELY98718.1| replication factor C large subunit [Natrialba chahannaoensis JCM
10990]
Length = 510
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 38/230 (16%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS 370
Q +++ G PG+GKT+ AH A G+ V+E+NASD R + IE + + ++
Sbjct: 37 QDAVIVHGSPGVGKTSAAHALANDLGWPVMELNASDSRGADVIERIAGEAAKSGTLTGGE 96
Query: 371 RPKCLVI-DEIDGALG--DGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCK 427
+ LVI DE D G D G+ EV + SA +
Sbjct: 97 SGRRLVILDEADNFHGNADYGGSREVTRVVKSANQ------------------------- 131
Query: 428 KASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIAL 487
P++ + N+ Y + +SLR + F S +V L+ IC E ++ AL
Sbjct: 132 ------PMVLVANEFYDMS-QSLRNACETIEFRDVSKRSIVPVLRDICRREDIEYEEEAL 184
Query: 488 TTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
+AE T D+RS +N LQ + ++ E L V D+ V G +D + FD
Sbjct: 185 EEIAEGTSGDLRSAVNDLQAVAEEAERLTVDDV---VTGDRDTTEGIFDF 231
>gi|412990353|emb|CCO19671.1| predicted protein [Bathycoccus prasinos]
Length = 528
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 44/210 (20%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRS----------SSTIENKILDVV 361
K +L+ GPPG+GKT+ A + G+ V+EVNASD R+ S + N++ ++V
Sbjct: 66 KAVLISGPPGIGKTSSAIIVCTQLGFSVMEVNASDSRNKASKDVQTGLSGSTSNQVKELV 125
Query: 362 QMNSV----MADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
+ + + L++DE+DG +G + ++ +
Sbjct: 126 TNRGLNFLKTTIHKNQVLIMDEVDGMSAGDRGGISDLIDTI------------------- 166
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
K++ + P+ICICND Y+ L++L+ F +P+ ++ RL I
Sbjct: 167 ---------KRSKI--PIICICNDRYSQKLKALQNHCFELNFQRPTKQQIHGRLSLIMKE 215
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQF 507
E+ S L T+ E DIR LN LQ
Sbjct: 216 ENFHMQSNELDTVIESCNGDIRLILNQLQL 245
>gi|344212534|ref|YP_004796854.1| replication factor C large subunit [Haloarcula hispanica ATCC
33960]
gi|343783889|gb|AEM57866.1| replication factor C large subunit [Haloarcula hispanica ATCC
33960]
Length = 508
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 102/238 (42%), Gaps = 36/238 (15%)
Query: 301 KKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDV 360
KK T ++ +++ G PG+GKT+ AH A G+ +E+NASD R+ I +
Sbjct: 26 KKWADTWDDHREAVIIHGSPGIGKTSAAHALANDMGWPTIELNASDSRTKDVINRVAGEA 85
Query: 361 VQMNSVMADSRPKCLVI-DEIDGALGDG-KGAVEVILKMVSAERKSNTAKENVAKEDQPE 418
+ ++ A + LVI DE D G+ +G I +V
Sbjct: 86 AKSGTLTAGGGGRRLVIMDEADNIHGNADRGGARAITALV-------------------- 125
Query: 419 KISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNE 478
K+AS +P+I I N+ Y + LR + F S +V L+ +C E
Sbjct: 126 --------KEAS--QPMILIANEYYEMS-NGLRNNCQDIEFRDVSPRSIVPVLRDLCRQE 174
Query: 479 SMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFD 536
++ S AL LAE D+R + LQ + + E L D+ V G +D + F+
Sbjct: 175 GVEYESDALQELAEQNSGDLRGAVKDLQAIAETTERLTADDV---VTGERDTTEGIFE 229
>gi|300710704|ref|YP_003736518.1| replication factor C large subunit [Halalkalicoccus jeotgali B3]
gi|448295034|ref|ZP_21485107.1| replication factor C large subunit [Halalkalicoccus jeotgali B3]
gi|299124387|gb|ADJ14726.1| replication factor C large subunit [Halalkalicoccus jeotgali B3]
gi|445585004|gb|ELY39308.1| replication factor C large subunit [Halalkalicoccus jeotgali B3]
Length = 482
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 112/243 (46%), Gaps = 42/243 (17%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS 370
QK ++L G PG+GKT+ AH A G+ +E+NASD R + ++ + + ++ +
Sbjct: 37 QKAVILHGSPGVGKTSAAHALANDLGWPTIELNASDQRKADIVKRIAGEAAKSGTLTGGT 96
Query: 371 RPKCLVI-DEIDGALGD----GKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKG 425
+ LVI DE D G+ G AV ++K
Sbjct: 97 AGRRLVILDEADNFHGNVDYGGSRAVTDVIK----------------------------- 127
Query: 426 CKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSI 485
S +PV+ I N+ Y + ++LR + F S +V L+ IC E ++ +
Sbjct: 128 ----SANQPVVLIANEFYDMS-QNLRNSCETVEFRDVSKRSIVPVLRDICRQEGIEFEAE 182
Query: 486 ALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQKR 545
AL +AE T+ D+RS +N LQ L ++++ L + V G +D ++ FD E+ +++
Sbjct: 183 ALEAIAENTDGDLRSAVNDLQALAEREDRLTAEAV---VTGERDRTKGIFDFLDEVIKEK 239
Query: 546 KTK 548
+
Sbjct: 240 GAQ 242
>gi|116789971|gb|ABK25455.1| unknown [Picea sitchensis]
Length = 550
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 107/269 (39%), Gaps = 58/269 (21%)
Query: 281 NSNNLEYENSNSKGIQDSWHKKTRSTGP----PEQKVLLLCGPPGLGKTTLAHVAAKHCG 336
+ +L E SKG K R G +K +LL G PG+GKTT A + ++ G
Sbjct: 32 DEQHLHTEGKESKG-------KKRGGGSVSSNASKKAVLLSGTPGIGKTTSARLISQMLG 84
Query: 337 YHVVEVNASDDRS----------SSTIENKILDVVQMNSVMADS------RPK-CLVIDE 379
+ +EVNASD R + + N I ++V S+ S R K L++DE
Sbjct: 85 FETIEVNASDSRGKADSKIERGMAGSTANSIKEMVSNESLSRGSFMDGSKRGKSVLIMDE 144
Query: 380 IDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICIC 439
+DG G +G V ++ + + C
Sbjct: 145 VDGMSGGDRGGVSDLIASIKISKIPIICI------------------------------C 174
Query: 440 NDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIR 499
ND Y L+SL F +P+ ++ RL + E +K AL L E D+R
Sbjct: 175 NDRYNQKLKSLVNYCLPLNFRKPTKQQMAKRLCQVAELEGLKVDEAALLELGERVNGDMR 234
Query: 500 SCLNTLQFLDKKKEILNVMDIGSQVVGRK 528
LN LQ++ IL DI +++ G K
Sbjct: 235 MALNQLQYMSLSSSILKYADIKARLQGSK 263
>gi|448671289|ref|ZP_21687228.1| replication factor C large subunit [Haloarcula amylolytica JCM
13557]
gi|445765892|gb|EMA17029.1| replication factor C large subunit [Haloarcula amylolytica JCM
13557]
Length = 508
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 102/238 (42%), Gaps = 36/238 (15%)
Query: 301 KKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDV 360
KK T ++ +++ G PG+GKT+ AH A G+ +E+NASD R+ I +
Sbjct: 26 KKWADTWDDHREAVIIHGSPGIGKTSAAHALANDMGWPTIELNASDSRTKDVINRVAGEA 85
Query: 361 VQMNSVMADSRPKCLVI-DEIDGALGDG-KGAVEVILKMVSAERKSNTAKENVAKEDQPE 418
+ ++ A + LVI DE D G+ +G I +V
Sbjct: 86 AKSGTLTAGGGGRRLVIMDEADNIHGNADRGGARAITALV-------------------- 125
Query: 419 KISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNE 478
K+AS +P+I I N+ Y + LR + F S +V L+ +C E
Sbjct: 126 --------KEAS--QPMILIANEYYEMS-NGLRNNCQDIEFRDVSPRSIVPVLRDLCRQE 174
Query: 479 SMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFD 536
++ S AL LAE D+R + LQ + + E L D+ V G +D + F+
Sbjct: 175 GVEYESEALQELAEQNSGDLRGAVKDLQAIAETTERLTADDV---VTGERDTTEGIFE 229
>gi|448685123|ref|ZP_21693133.1| replication factor C large subunit [Haloarcula japonica DSM 6131]
gi|445782326|gb|EMA33173.1| replication factor C large subunit [Haloarcula japonica DSM 6131]
Length = 508
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 102/238 (42%), Gaps = 36/238 (15%)
Query: 301 KKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDV 360
KK T ++ ++L G PG+GKT+ AH A G+ +E+NASD R+ I +
Sbjct: 26 KKWAETWDDHREAVILYGSPGIGKTSAAHALANDMGWPTIELNASDSRTKDVINRVAGEA 85
Query: 361 VQMNSVMADSRPKCLVI-DEIDGALGDG-KGAVEVILKMVSAERKSNTAKENVAKEDQPE 418
+ ++ A + LVI DE D G+ +G I +V
Sbjct: 86 AKSGTLTAGGGGRRLVIMDEADNIHGNADRGGARAITALV-------------------- 125
Query: 419 KISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNE 478
K+AS +P+I I N+ Y + LR + F S +V L+ +C E
Sbjct: 126 --------KEAS--QPMILIANEYYEMS-NGLRNNCQDIEFRDVSPRSIVPVLRDLCRQE 174
Query: 479 SMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFD 536
++ S AL LAE D+R + LQ + + E L D+ V G +D + F+
Sbjct: 175 GVEYESDALQELAEQNSGDLRGAVKDLQAIAETTERLTDDDV---VTGERDTTEGIFE 229
>gi|448681247|ref|ZP_21691380.1| replication factor C large subunit [Haloarcula argentinensis DSM
12282]
gi|445767780|gb|EMA18873.1| replication factor C large subunit [Haloarcula argentinensis DSM
12282]
Length = 508
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 99/228 (43%), Gaps = 36/228 (15%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS 370
++ ++L G PG+GKT+ AH A G+ +E+NASD R+ I + + ++ A
Sbjct: 36 REAVILYGSPGIGKTSAAHALANDMGWPTIELNASDSRTKDVINRVAGEAAKSGTLTAGG 95
Query: 371 RPKCLVI-DEIDGALGDG-KGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKK 428
+ LVI DE D G+ +G I +V K+
Sbjct: 96 GGRRLVIMDEADNIHGNADRGGARAITALV----------------------------KE 127
Query: 429 ASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALT 488
AS +P+I I N+ Y + LR + F S +V L+ +C E ++ S AL
Sbjct: 128 AS--QPMILIANEYYEMS-NGLRNNCQDIEFRDVSPRSIVPVLRDLCRQEGVEYESDALQ 184
Query: 489 TLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFD 536
LAE D+R + LQ + + E L D+ V G +D + F+
Sbjct: 185 ELAEQNSGDLRGAVKDLQAIAETTERLTADDV---VTGERDTTEGIFE 229
>gi|212224564|ref|YP_002307800.1| replication factor C large subunit [Thermococcus onnurineus NA1]
gi|212009521|gb|ACJ16903.1| replication factor C, large subunit [Thermococcus onnurineus NA1]
Length = 500
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 138/352 (39%), Gaps = 61/352 (17%)
Query: 298 SWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKI 357
+W + PP++K LLL G PG GKTT + A+ G+ V+E+NASD+R+ IE +
Sbjct: 34 AWIEAWLHGNPPKKKALLLAGSPGTGKTTTIYALAREYGFEVIELNASDERTYEKIERYV 93
Query: 358 LDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
M+ + R K + +DE D + GA E I K++ R
Sbjct: 94 QAAYTMD--ILGKRRKLIFLDESDNI--EPSGARE-IAKLIDKARN-------------- 134
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
P+I N Y R +R A++ + + S ++ L I
Sbjct: 135 ----------------PIIMSANH-YWEVPREIRNKAQIVEYKRLSQRDIMKALIRILKA 177
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
E + L +A+ D+R+ +N LQ + + ++ +V+ +D+ +S F
Sbjct: 178 EGVTVPKEILQEIAKRANGDLRAAINDLQTV-----VSGGIEDAREVLAYRDVEKSVFQA 232
Query: 538 WKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPV 597
++F KR + +V NE + I EN L Y+ P
Sbjct: 233 LAQLFATDNAKRAKLAVLGVDMFPNE----------------LLQWIDEN-LPYVYYKPE 275
Query: 598 MLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNL 649
+ + L +D+ RT L+ Y + +T V+ ++K
Sbjct: 276 --DIARAYEALSRADIYLGRAQRTGNYGLWKYATDM-MTAGVAVAGVKKKGF 324
>gi|154338281|ref|XP_001565365.1| putative replication factor C, subunit 1 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062414|emb|CAM42275.1| putative replication factor C, subunit 1 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 664
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 87/204 (42%), Gaps = 37/204 (18%)
Query: 308 PPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM 367
P + +LL G PG+GKTT +V A+ G VVE NASD RS ++ + D++ +
Sbjct: 61 PKKPHGVLLSGSPGVGKTTTVYVVARELGRTVVEYNASDFRSRKSLRENVSDLINNRAFS 120
Query: 368 ADSRPK---CLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKK 424
A + L++DE+DG G G V +LK
Sbjct: 121 ARATSYTTVVLLMDEVDGCDIGGVGEVIEMLK---------------------------- 152
Query: 425 GCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRL-KHICNNESMKTS 483
S P++C CND + P LRSL + F P + V + L + E + S
Sbjct: 153 -----STRIPILCTCNDRWHPKLRSLLNYVEDMRFSHPPCNVVANYLCDRVLAREGISLS 207
Query: 484 SIALTTLAEYTECDIRSCLNTLQF 507
L + + + DIRS LN LQ
Sbjct: 208 KPLLQDIIKTSGSDIRSMLNNLQL 231
>gi|167044405|gb|ABZ09082.1| putative ATPase family associated with various cellular activities
(AAA) [uncultured marine crenarchaeote HF4000_APKG6D3]
Length = 386
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 151/363 (41%), Gaps = 82/363 (22%)
Query: 298 SWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKI 357
+W K TR +LL GPPG+GKTTLA++AAK GY ++ +NASD R+ I +
Sbjct: 31 NWKKGTRP--------ILLVGPPGIGKTTLANLAAKQFGYDLISLNASDVRNKQNIHEIL 82
Query: 358 LDVVQMNSVMADSRPKCLVIDEIDGALGDGK-GAVEVILKMVSAERKSNTAKENVAKEDQ 416
V+ +V+ + IDE+DG G G E I+K++ KE
Sbjct: 83 SPVLGNQTVLGTP---MIFIDEVDGVHGRADYGGTEAIIKIL---------KEPTV---- 126
Query: 417 PEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVF--IQPSVSRVVSRLKHI 474
P++ N + ++S++++ K + P + R+ L I
Sbjct: 127 -----------------PIVLAANTDSSDKMKSIKKVVKTIEMKPLSPKLLRLC--LNRI 167
Query: 475 CNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGR---KDMS 531
E +K S +L L + DIRS +N Q ++ G + S
Sbjct: 168 LQLEGVKIDSDSLAKLVTKSRGDIRSMINFTQ---------------ARATGFDPPTEKS 212
Query: 532 RSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQL 591
+ DI + I N+ +++ L+SL R D + + +I+
Sbjct: 213 FESLDIEEGI----------NAFYKANSTVEARSILYSL---RIDPREKINAFYSSIITS 259
Query: 592 QYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHR--LVSQIQKPNL 649
+ M K L + +D+++ IM+TQQ L Y + + +++ ++ + K NL
Sbjct: 260 KISADDM---QKFLQVISEADMLYGKIMKTQQWRLLRYLDAILLGLYKKDILIRYSKYNL 316
Query: 650 EWP 652
WP
Sbjct: 317 SWP 319
>gi|240104120|ref|YP_002960429.1| replication factor C large subunit [Thermococcus gammatolerans EJ3]
gi|239911674|gb|ACS34565.1| Replication factor C, large subunit (rfcL) [Thermococcus
gammatolerans EJ3]
Length = 507
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 109/257 (42%), Gaps = 41/257 (15%)
Query: 298 SWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKI 357
+W + PP++K L+L GPPG+GKTT + A G+ V+E+NASD+R+ IE +
Sbjct: 33 AWVEAWLHGNPPKKKALILAGPPGVGKTTTVYALANEYGFEVIELNASDERTYEKIERYV 92
Query: 358 LDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
M+ + R K + +DE D + GA E I K++ R
Sbjct: 93 QAAYTMD--ILGKRRKLIFLDEADNI--EPSGARE-IAKLIDRARN-------------- 133
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
P+I N Y + +R A++ + + + ++ L I
Sbjct: 134 ----------------PIIMSANH-YWEVPKEIRNRAQIVEYKRLTQRDIIKALVRILKR 176
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
E L +A+ D+R+ +N LQ + + ++ +V+ +D+ +S F
Sbjct: 177 EGKTVPKEILYEIAKRANGDLRAAINDLQTV-----VTGGVEDAKEVLAYRDVEKSVFQA 231
Query: 538 WKEIFQKRKTKRLRNSV 554
++F KR + +V
Sbjct: 232 LAQVFATDNAKRAKIAV 248
>gi|401422850|ref|XP_003875912.1| putative replication factor C, subunit 1 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492152|emb|CBZ27426.1| putative replication factor C, subunit 1 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 659
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 87/204 (42%), Gaps = 37/204 (18%)
Query: 308 PPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM 367
P + +LL G PG+GKTT +V A G VVE NASD RS +++ + D+V +
Sbjct: 60 PKKPHGVLLSGSPGVGKTTTVYVVAHELGCTVVEYNASDFRSRKSLKENVSDLVNNRAFS 119
Query: 368 ADSRPKC---LVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKK 424
A + L++DE+DG G G V +LK S
Sbjct: 120 ARATSYTNVILLMDEVDGCDIGGVGEVIEMLKSTSI------------------------ 155
Query: 425 GCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRL-KHICNNESMKTS 483
P++C CND + P LRSL + F P + V + L + E + S
Sbjct: 156 ---------PILCTCNDRWHPKLRSLLNYVEDMRFSHPPCNIVANYLCDRVLAREGISLS 206
Query: 484 SIALTTLAEYTECDIRSCLNTLQF 507
L + + + DIRS LN LQ
Sbjct: 207 KPLLQDIIKKSGSDIRSMLNNLQL 230
>gi|390369475|ref|XP_791049.3| PREDICTED: chromosome transmission fidelity protein 18 homolog,
partial [Strongylocentrotus purpuratus]
Length = 355
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 109/234 (46%), Gaps = 17/234 (7%)
Query: 584 IHENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQ 643
+ EN L++++ DP M D L SD++ I RTQ + P + +T H L +
Sbjct: 1 VFENYLEVKFKDPHMDAINMASDWLVFSDIVQSKIARTQNYIFGRFLPFVPLTFHMLFAC 60
Query: 644 IQKPNLEWPKSYQRYRNAFMEKMDIFKSWHSKIPPYISRHLSTESLVEDSISPLLHILSP 703
+ + +P + + ++ ++ S+I P I + ++ + V + + PLL I++
Sbjct: 61 VAYTKIRYPNTGFEIKTKTELIKNLVETMRSEIDPSIRQGINLKLAVTELLPPLL-IITQ 119
Query: 704 PTLRPVALHLLSAKEKNDLAQLVSAMVSYSLTYKNTKSDPLLNNLGNEVSHDVST-LSFD 762
P RP+ L SA EK L +LV M++Y+LTY+ +S N + + D+ S
Sbjct: 120 PAFRPINTQLFSAAEKKQLRELVDTMIAYNLTYRQERSMEGTYNYNLDPNLDIVVRFSDS 179
Query: 763 PPINEFITFKGYRSNHYVLALAVKQVLVHEV--EKQRIMQVTIGKSEHLADGYK 814
PP+ + IT+ A KQ++ E+ EK R + + K A K
Sbjct: 180 PPVRQ-ITY------------AAKQLIAREIALEKMRRSEAVLAKRSAKASASK 220
>gi|269860225|ref|XP_002649835.1| replication factor C subunit [Enterocytozoon bieneusi H348]
gi|220066776|gb|EED44248.1| replication factor C subunit [Enterocytozoon bieneusi H348]
Length = 570
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 100/238 (42%), Gaps = 39/238 (16%)
Query: 307 GPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSV 366
G + LL+ G PGLGKTT HV K ++E NASD R+ +E I + +S+
Sbjct: 160 GKSVKNGLLITGTPGLGKTTAVHVLCKKHDILMIEFNASDVRNKKNLEQYIKLKINSHSI 219
Query: 367 MADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGC 426
+ R +++DE+DG D G E+I +
Sbjct: 220 FRNKR--IILMDEVDGMFSDHGGINELIQIIKMNIIPII--------------------- 256
Query: 427 KKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIA 486
CI ND P ++SL F +P ++ ++ RLK I E+
Sbjct: 257 ----------CITNDRAHPKIKSLANYCIEVKFKKPVINSLIPRLKSILKAENKSIPDNI 306
Query: 487 LTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQK 544
L + D+R +NTLQ K K I N+ ++ + K +S++ F+I E+F K
Sbjct: 307 LFEICRLCNQDLRYIINTLQ---KNKSITNIKELN---IFTKIISKNIFEITSELFSK 358
>gi|358382655|gb|EHK20326.1| hypothetical protein TRIVIDRAFT_181187 [Trichoderma virens Gv29-8]
Length = 942
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 112/230 (48%), Gaps = 37/230 (16%)
Query: 320 PGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS--------- 370
PG K A GY V+EVNASDDRS ++N+I + SV S
Sbjct: 272 PGTAK------AKPKAGYEVIEVNASDDRSRDVVKNRIRTSLGTESVKNVSNQKALNGSQ 325
Query: 371 ---RPKCLVIDEI------DGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKIS 421
+P C+V+DE+ GA G+G G ++ ++ +V ++K+++ V K
Sbjct: 326 KVAKPACVVVDEVDGVVTGSGASGEG-GFIKALIDLVLIDQKNSSG---VTKSYD----G 377
Query: 422 KKKGCKKASLLRPVICICNDLYAPALRSLRQ--IAKVHVFIQPSVSRVVSRLKHICNNES 479
KKK L+RP+I ICND+Y P+LR LRQ +A++ +P++ VV RLK + E
Sbjct: 378 KKKKGDDFRLMRPLILICNDVYHPSLRPLRQSNLAEIIHVGRPTLDTVVGRLKTVFEKEG 437
Query: 480 MKTSSIALTTLAEYTECDIRSCLNTLQFLDK--KKEILNVMDIGSQVVGR 527
+ A L E T + S ++ + + + ++ VM +G V R
Sbjct: 438 IPCDKDAARKLCE-TAWGMASGIDAKRGQESTVQGDLRGVMVVGEWVAAR 486
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%)
Query: 177 NSSSEGQSDRSLPEKPVVHEQLWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVF 233
NS+ S+ +K LW +KY +F +L D+ TNR VL WLK+WD VF
Sbjct: 215 NSAVRSMEATSISDKKPKKTMLWTEKYRARNFMDLCGDDSTNRLVLRWLKKWDPLVF 271
>gi|448630971|ref|ZP_21673426.1| replication factor C large subunit [Haloarcula vallismortis ATCC
29715]
gi|445755345|gb|EMA06735.1| replication factor C large subunit [Haloarcula vallismortis ATCC
29715]
Length = 503
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 99/228 (43%), Gaps = 36/228 (15%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS 370
++ +++ G PG+GKT+ AH A G+ +E+NASD R+ I + + ++ A
Sbjct: 36 REAVIIHGSPGIGKTSAAHALANDMGWPTIELNASDSRTKDVINRVAGEAAKSGTLTAGG 95
Query: 371 RPKCLVI-DEIDGALGDG-KGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKK 428
+ LVI DE D G+ +G I +V K+
Sbjct: 96 GGRRLVIMDEADNIHGNADRGGARAITALV----------------------------KE 127
Query: 429 ASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALT 488
AS +P+I I N+ Y + LR + F S +V L+ +C E ++ S AL
Sbjct: 128 AS--QPMILIANEYYEMS-NGLRNNCQDIEFRDVSPRSIVPVLRDLCRQEGVEYESDALQ 184
Query: 489 TLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFD 536
LAE D+R + LQ + + E L D+ V G +D + F+
Sbjct: 185 ELAEQNSGDLRGAVKDLQAIAETTERLTADDV---VTGERDTTEGIFE 229
>gi|440493242|gb|ELQ75739.1| Replication factor C, subunit RFC1 (large subunit)
[Trachipleistophora hominis]
Length = 476
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 93/225 (41%), Gaps = 50/225 (22%)
Query: 312 KVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADSR 371
K LL+ GPPG+GK+ +A Y + E NASD R+ ++ ++ V N +
Sbjct: 65 KALLIAGPPGVGKSLCVKLACASTVYEMTEFNASDVRNKGSLSERVRQFV--NCACISGK 122
Query: 372 PKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASL 431
+ LV+DE DG GD G E++ + +A
Sbjct: 123 RRALVMDECDGMTGDRGGMPELVQIIKNAR------------------------------ 152
Query: 432 LRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLA 491
PVICICND Y A+R L + + F + +++ R++ I +E + + +
Sbjct: 153 -MPVICICNDKY--AVRPLASVCEEVTFRKLETRQILGRIRDILKSEHRAVTDKEIVEVC 209
Query: 492 EYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFD 536
D+R LN LQ +V+ K +SR+ FD
Sbjct: 210 AMANNDMRYILNCLQ---------------GRVMYTKVVSRTLFD 239
>gi|386876490|ref|ZP_10118601.1| ATPase, AAA family [Candidatus Nitrosopumilus salaria BD31]
gi|386805697|gb|EIJ65205.1| ATPase, AAA family [Candidatus Nitrosopumilus salaria BD31]
Length = 389
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 154/370 (41%), Gaps = 74/370 (20%)
Query: 289 NSNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDR 348
N S+ W K + P LLL GPPG+GKTT+A++ A+ GY ++ +NASD R
Sbjct: 21 NEESRAAIMEWFVKWKKGTKP----LLLVGPPGIGKTTIAYLVAEQFGYDMIGLNASDVR 76
Query: 349 SSSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALG--DGKGAVEVILKMVSAERKSNT 406
S S I ++ V+ SVM + +DE+DG G D GA +I
Sbjct: 77 SKSRINEILMPVLANVSVMG---IPMIFVDEVDGIHGRSDFGGASALI------------ 121
Query: 407 AKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVF--IQPSV 464
++ KE P+I N + ++ +++ K F I P +
Sbjct: 122 ---DILKEPTV----------------PIILAANSDTSDKMKGIKKAVKTIYFKKIPPRL 162
Query: 465 SRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQV 524
R+ L++I ES K S +L + + DIRS +N Q S V
Sbjct: 163 LRI--YLENILKKESAKLSPGSLIKVIGKSRGDIRSMINLTQ---------------SFV 205
Query: 525 VGRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGI 584
G + + F+ + N+ ++++ L+S+ + D +
Sbjct: 206 TGFNPQTETT-------FENINIEDGINAFFKANSIEEARLILYSM---QIDPREKINAF 255
Query: 585 HENILQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQI 644
+ +I+ + + K L+ + N+D++ IM+TQ L Y + I +++ +I
Sbjct: 256 YSSIITSNIDNSTL---AKYLEIMSNADMLFGKIMKTQNWRLLRYLNDILIKLYQNDDRI 312
Query: 645 Q--KPNLEWP 652
+ + NL WP
Sbjct: 313 RYSQYNLSWP 322
>gi|47210904|emb|CAF94208.1| unnamed protein product [Tetraodon nigroviridis]
Length = 775
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 117/581 (20%), Positives = 202/581 (34%), Gaps = 188/581 (32%)
Query: 198 LWVDKYAPNSFTELLS---DEQTNREVLLWLKQWDSCVFGSEIRSTSEEVLSALRRHSTI 254
LWVDKY P S ++ ++ ++L WL+ W R H
Sbjct: 205 LWVDKYRPRSLKAVIGQQGEQSCANKLLRWLQNWH-------------------RHHGGG 245
Query: 255 SQNKKQNDSSFTRKNRGNRWSNGNFRNSNNLEYENSNSKGIQDSWHKKTRSTGPPEQKVL 314
+ F K+ G+ + K
Sbjct: 246 TLKAPAKTGKFGGKDDGSGY-------------------------------------KAA 268
Query: 315 LLCGPPGLGKTTLAHVAAK---------------------------HCGYH--------- 338
LL GPPG+GKTT A + + H G+H
Sbjct: 269 LLSGPPGVGKTTTASLVCEVSPCLSSGGKRVFGVDGFLSLSLSVSSHAGFHGHLQELGFS 328
Query: 339 VVEVNASDDRSSSTIENKILDVVQMNSV--------MADSRPKCLVIDEIDGALG-DGKG 389
VE+NAS RS ++++ + + V S+ S L++DE+DG G + +G
Sbjct: 329 YVEMNASCTRSKNSLKEVVAESVNNTSIENFYRGTSQTVSSKHVLIMDEVDGMAGNEDRG 388
Query: 390 AVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRS 449
++ ++ ++ KG K P+IC+CND +RS
Sbjct: 389 GIQELIALI-------------------------KGSKI-----PIICMCNDRNHMKIRS 418
Query: 450 LRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLD 509
L F +P V ++ + + I E +K + AL + + D+R L+ L
Sbjct: 419 LANYCFDLRFQRPRVEQIKAAMMSIAFKEGIKNLAPALNEIILASNQDVRQVLHNLSMWT 478
Query: 510 KKKEILNVMDIGSQVV-GRKDMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLH 568
++++ + RKDM F++ +++F + + S+ S++ F H
Sbjct: 479 ATDKVMSYDRCKADAAKARKDMKIGPFEVCRKVFSAGE-EAAHMSLMDKSDL-----FFH 532
Query: 569 SLISNRGDYDVIFDGIHENIL---------QLQYHDPVMLKTVKCLDCLGNSDLMHQYIM 619
DY + + EN L L+ H ++ KT D + + DL+ + I
Sbjct: 533 -------DYSLAPLFVQENYLNVRPAAAGGNLKSHLMLLSKTA---DSISDGDLVDRRIR 582
Query: 620 RTQQMPLYVYQPPLAITVHRLVSQIQKPNLEWPKSYQRYRNAFMEKMDIFKSW------- 672
Q L P AI L ++ + +M + F SW
Sbjct: 583 SGQNWSLL---PTQAIYASVLPGELMR--------------GYMSQFPSFPSWLGKNSSA 625
Query: 673 --HSKIPPYISRHLSTESLVEDSISPL--LHILSPPTLRPV 709
HS+I ++ H+ +++ L LH L LRP+
Sbjct: 626 GKHSRIVQELTAHMGLKTMSSRQAVNLDYLHYLRQALLRPL 666
>gi|448609953|ref|ZP_21660803.1| replication factor C large subunit [Haloferax mucosum ATCC
BAA-1512]
gi|445745312|gb|ELZ96779.1| replication factor C large subunit [Haloferax mucosum ATCC
BAA-1512]
Length = 484
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 110/244 (45%), Gaps = 41/244 (16%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMADS 370
++ +++ G PG+GKT+ AH A G+ VE+NASD R+ IE + N+ ++ S
Sbjct: 37 REAVVVHGSPGIGKTSAAHALASDMGWETVELNASDQRTGDVIE-RFAGRAAKNATLSGS 95
Query: 371 RP-----KCLVIDEIDGALGD-GKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKK 424
+ +++DE D G+ +G + ++V KS++
Sbjct: 96 STGTSTRQLVILDEADNIHGNYDRGGSSAVTRLV----KSSS------------------ 133
Query: 425 GCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSS 484
+P++ I N+ Y + R LR + F S +V L+ IC E ++
Sbjct: 134 --------QPIVLIANEFYDMS-RGLRNACQEIEFRDVSARSIVPVLRDICRKEGLEFEP 184
Query: 485 IALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDIWKEIFQK 544
AL +A+ D+RS +N LQ + + ++ + D+ ++G +D S F+ + ++
Sbjct: 185 DALERIADMNSGDLRSAVNDLQAIAEGRDEITEEDV---IMGDRDRSVGLFEFLDAVLKE 241
Query: 545 RKTK 548
+
Sbjct: 242 ESAQ 245
>gi|359415520|ref|ZP_09207967.1| replication factor C large subunit [Candidatus Haloredivivus sp.
G17]
gi|358034123|gb|EHK02581.1| replication factor C large subunit [Candidatus Haloredivivus sp.
G17]
Length = 394
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 134/343 (39%), Gaps = 59/343 (17%)
Query: 290 SNSKGIQDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRS 349
SN K W +K G + +LL G G GKT+L A + +VE NASD R+
Sbjct: 18 SNQKKELKDWAEKWEQGG----QAVLLHGQAGTGKTSLVEALANDLDFELVETNASDVRT 73
Query: 350 SSTIENKILDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKE 409
S ++ ++ + S + K +++DE+DG +G + + +++S R
Sbjct: 74 KSALKEELKGATRQASFFGGN--KLILVDEVDGMGRSDRGGIAEMKEIISESR------- 124
Query: 410 NVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVS 469
PV+ ND Y +R LR I+K + + +
Sbjct: 125 -----------------------FPVVMTANDAYDQKIRPLRNISKQVKLDSVHTNSINA 161
Query: 470 RLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKD 529
LK I E + A+ +A +RS +N L+ + +E L I + + ++D
Sbjct: 162 HLKWILEQEGIGYDEGAVKRVARRAGGQMRSAINDLEAVALGREKLEKEHI--EDLDQRD 219
Query: 530 MSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENIL 589
+ FD K IF KT N+ +S N+ D + + ENI
Sbjct: 220 SRQEIFDALKIIF---KTTDAENARRASDNLDE-------------DAETFMQWVRENIP 263
Query: 590 QLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPL--YVYQ 630
+ +Y P K + +DL + I R L Y+Y+
Sbjct: 264 R-EYERPE--DNEKAYYWISKADLFNGRIRRRMSWSLMKYIYE 303
>gi|390961473|ref|YP_006425307.1| replication factor C large subunit [Thermococcus sp. CL1]
gi|390519781|gb|AFL95513.1| replication factor C large subunit [Thermococcus sp. CL1]
Length = 498
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 136/352 (38%), Gaps = 61/352 (17%)
Query: 298 SWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKI 357
+W + PP++K L+L GPPG+GKTT + A G+ V+E+NASD+R+ IE +
Sbjct: 30 AWVEAWLHGNPPKKKALILAGPPGVGKTTTVYALANEYGFEVIELNASDERTFEKIERYV 89
Query: 358 LDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
++ + R K + +DE D + GA E I K++ R
Sbjct: 90 QAAYTLD--ILGKRRKLIFLDEADNI--EPSGARE-IAKLIDRARN-------------- 130
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
P+I N Y R +R A++ + + + ++ L I
Sbjct: 131 ----------------PIIMSANH-YWEVPREIRNKAQIVEYKRLTQRDIIKALIRILKR 173
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
E L +A+ D+R+ +N LQ + + + +V+ +D+ +S F
Sbjct: 174 EGKTVPKEILYEIAKRASGDLRAAINDLQTV-----VTGGTEDAKEVLAYRDVEKSVFQA 228
Query: 538 WKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENILQLQYHDPV 597
+IF K+ + + F H L+ I EN+ + Y
Sbjct: 229 LAQIFATDNAKKAKMATLGVDM------FPHELLQ----------WIDENVPYVYYRPE- 271
Query: 598 MLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQKPNL 649
+ + L +D+ RT L+ Y + +T V+ ++K
Sbjct: 272 --DIARAYEALSRADIYLGRAQRTGNYSLWKYATDM-MTAGVAVAGVKKKGF 320
>gi|154416257|ref|XP_001581151.1| transcription factor [Trichomonas vaginalis G3]
gi|121915376|gb|EAY20165.1| transcription factor, putative [Trichomonas vaginalis G3]
Length = 687
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 96/224 (42%), Gaps = 48/224 (21%)
Query: 310 EQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMAD 369
+ K+ L+ G G GKTTLAH+ A G+H E+NASD R+ I+N LDV +
Sbjct: 215 KNKIALISGDQGCGKTTLAHLMASSLGFHCNELNASDVRTKGEIQN-FLDVTTSGCIETS 273
Query: 370 SR----PKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKG 425
+ +CL+ DEIDG +G + I + +
Sbjct: 274 KKKGLGKECLIFDEIDGMGAGDRGGISAIASLAKTTK----------------------- 310
Query: 426 CKKASLLRPVICICNDLYAPALRSLRQIAK-VHVFIQPSVSR--VVSRLKHICNNESMKT 482
P+ICI L +I + +++ P + R + ++L + +E +
Sbjct: 311 -------IPIICITTGKSDKKFDPLLKICESINI---PKIERGLMCNKLITVAKSEGINI 360
Query: 483 SSIALTTLAEYTECDIRSCLNTLQF-------LDKKKEILNVMD 519
S ++ ++AE D+R LN+L+F +K K + N +D
Sbjct: 361 SQKSIQSIAERANGDLRYALNSLEFWSASDNGFEKAKSVDNAVD 404
>gi|335436421|ref|ZP_08559216.1| replication factor C large subunit [Halorhabdus tiamatea SARL4B]
gi|334897733|gb|EGM35862.1| replication factor C large subunit [Halorhabdus tiamatea SARL4B]
Length = 498
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 93/217 (42%), Gaps = 33/217 (15%)
Query: 306 TGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNS 365
T P ++ ++L G PG+GKT+ AH A + +E+NASD R+ IE + + +
Sbjct: 32 TWPDHREAVILYGSPGVGKTSAAHALANDMDWPTIELNASDSRTKDVIERVAGEAAKSGT 91
Query: 366 VMADSRPKCLVI-DEIDGALGD-GKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKK 423
+ + LVI DE D G+ +G I +V KE Q
Sbjct: 92 LTQGGSGRRLVILDEADNLHGNVDRGGTRAITSLV--------------KEAQ------- 130
Query: 424 KGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTS 483
+P++ I N+ Y + LR + F S +V L+ IC E +
Sbjct: 131 ---------QPMVLIANEFYEMS-NGLRNACRDIEFRDVSARSIVPVLRDICRQEDVGFE 180
Query: 484 SIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDI 520
AL +AE + D+R +N LQ + + +E + D+
Sbjct: 181 EDALRKIAEMNDGDLRGAINDLQAIAEGRETVTEDDV 217
>gi|340344135|ref|ZP_08667267.1| AAA ATPase central domain protein [Candidatus Nitrosoarchaeum
koreensis MY1]
gi|339519276|gb|EGP92999.1| AAA ATPase central domain protein [Candidatus Nitrosoarchaeum
koreensis MY1]
Length = 385
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 159/360 (44%), Gaps = 74/360 (20%)
Query: 299 WHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKIL 358
W K + P LLL GPPG+GKTT+A++ AK Y +V +NASD RS S I N+IL
Sbjct: 27 WFTKWKKGTKP----LLLVGPPGIGKTTIAYLTAKQFQYDMVGLNASDVRSKSRI-NEIL 81
Query: 359 DVVQMNSVMADSRPKCLVIDEIDGALGDGK-GAVEVILKMVSAERKSNTAKENVAKEDQP 417
V + +V P + IDE+DG G G G E +++++
Sbjct: 82 SPV-LGNVSILGLP-MIFIDEVDGIHGRGDYGGAEALIEIL------------------- 120
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVF--IQPSVSRVVSRLKHIC 475
K+ ++ P+I N + ++S++++ K F I P + ++ L++I
Sbjct: 121 ---------KEPTI--PIILAANSDTSDKMKSIKKVVKTISFKPIPPRLLKIY--LENIL 167
Query: 476 NNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAF 535
E++ S ++ + + + D+RS +N Q S V G + +F
Sbjct: 168 KKENVTLSPGSIIKVIDRSRGDVRSMINLTQ---------------SLVTGFNPQTEKSF 212
Query: 536 DIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHS-LISNRGDYDVIFDGIHENILQLQYH 594
+ + + + +++ +N FD L S + D + D + +I+
Sbjct: 213 E----------SINVEDGINAFFK-ANSFDEARGVLYSMQIDPRLKIDAFYSSIVTSNLD 261
Query: 595 DPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVYQPPLAITVHRLVSQIQ--KPNLEWP 652
+ + K L+ + +D+++ IM+TQ L Y + I ++ +I+ + NL WP
Sbjct: 262 NQTL---AKLLEIISEADILYGKIMKTQNWRLLRYLNEILIRLYLNDERIRYSQYNLSWP 318
>gi|448413827|ref|ZP_21577134.1| replication factor C large subunit [Halosarcina pallida JCM 14848]
gi|445682883|gb|ELZ35294.1| replication factor C large subunit [Halosarcina pallida JCM 14848]
Length = 500
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 135/341 (39%), Gaps = 68/341 (19%)
Query: 299 WHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIE---- 354
W K T ++ ++L G PG+GKT+ AH A G+ VE+NASD R++ IE
Sbjct: 29 WGK----TWGDHREAVVLHGAPGVGKTSAAHALAADMGWETVELNASDQRTADVIERFAG 84
Query: 355 ----NKILDVVQMNSVMADSRPKCLVI-DEIDGALGD-GKGAVEVILKMVSAERKSNTAK 408
N L + + LVI DE D G+ +G + ++V ++SN
Sbjct: 85 RAAKNATLAGAAAGDANGEREGRQLVILDEADNIHGNYDRGGAGAVTRLV---KESN--- 138
Query: 409 ENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVV 468
+P++ I N+ Y + LR A+ F S +V
Sbjct: 139 ------------------------QPIVLIANEYYDMS-NGLRNAAREIEFRDVSARSIV 173
Query: 469 SRLKHICNNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRK 528
L+ I E ++ AL +AE D+RS +N LQ + E L V D+ V +
Sbjct: 174 PVLRDILRKEGIEFDDDALDRIAEVNSGDLRSAVNDLQAAAEGTERLAVEDV---VTAAR 230
Query: 529 DMSRSAFDIWKEIFQKRKTKRLRNSVSSSSNVSNEFDFLHSLISNRGDYDVIFDGIHENI 588
D SA +++ I K R ++ SS V D I E+
Sbjct: 231 D---SAIGLFEYIDSVLKEDSAREALQSSYAVDETPDNQVKWI--------------EDK 273
Query: 589 LQLQYHDPVMLKTVKCLDCLGNSDLMHQYIMRTQQMPLYVY 629
+ L Y D + + + L N+D+ +M TQ + Y
Sbjct: 274 VSLVYDDEEL---ARAYEFLANADVWLGRVMATQDYSYWRY 311
>gi|448637179|ref|ZP_21675555.1| replication factor C large subunit [Haloarcula sinaiiensis ATCC
33800]
gi|445764726|gb|EMA15870.1| replication factor C large subunit [Haloarcula sinaiiensis ATCC
33800]
Length = 508
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 101/238 (42%), Gaps = 36/238 (15%)
Query: 301 KKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDV 360
KK T ++ ++L G PG+GKT+ AH A + +E+NASD R+ I +
Sbjct: 26 KKWAETWDDHREAVILYGSPGIGKTSAAHALANDMEWPTIELNASDSRTKDVINRVAGEA 85
Query: 361 VQMNSVMADSRPKCLVI-DEIDGALGDG-KGAVEVILKMVSAERKSNTAKENVAKEDQPE 418
+ ++ A + LVI DE D G+ +G I +V
Sbjct: 86 AKSGTLTAGGGGRRLVIMDEADNIHGNADRGGARAITALV-------------------- 125
Query: 419 KISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNE 478
K+AS +P+I I N+ Y + LR + F S +V L+ +C E
Sbjct: 126 --------KEAS--QPMILIANEYYEMS-NGLRNNCQDIEFRDVSPRSIVPVLRDLCRQE 174
Query: 479 SMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFD 536
++ S AL LAE D+R + LQ + + E L D+ V G +D + F+
Sbjct: 175 GVEYESDALQELAEQNSGDLRGAVKDLQAIAETTERLTADDV---VTGERDTTEGIFE 229
>gi|218884000|ref|YP_002428382.1| replication factor C small subunit [Desulfurococcus kamchatkensis
1221n]
gi|218765616|gb|ACL11015.1| replication factor C small subunit [Desulfurococcus kamchatkensis
1221n]
Length = 326
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 44/201 (21%)
Query: 314 LLLCGPPGLGKTTLAHVAAKHCGY------HVVEVNASDDRSSSTIENKILDVVQMNSVM 367
+L GPPG GKTT+AH A H Y +++E+NASD+R I K+ + + V+
Sbjct: 43 MLFAGPPGTGKTTIAHCLA-HDLYGDDYRKYMLELNASDERKIEVIRGKVKEFAR-TRVV 100
Query: 368 ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCK 427
D K +++DE D D + A+ ++++ SA + + + P KI
Sbjct: 101 GDVPFKIVLLDEADNMTADAQQALRRLMELYSATTRF------ILTANYPSKI------- 147
Query: 428 KASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSR--VVSRLKHICNNESMKTSSI 485
+ P+ ++ +F +SR VV RLK+ICN E ++ +
Sbjct: 148 ----IEPI-----------------QSRTAIFRFSPLSREDVVGRLKYICNAEKIECAEK 186
Query: 486 ALTTLAEYTECDIRSCLNTLQ 506
AL T+ E +E D+R +N LQ
Sbjct: 187 ALETIYELSEGDMRRAINILQ 207
>gi|257054072|ref|YP_003131905.1| replication factor C large subunit [Halorhabdus utahensis DSM
12940]
gi|256692835|gb|ACV13172.1| AAA ATPase central domain protein [Halorhabdus utahensis DSM 12940]
Length = 507
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 93/215 (43%), Gaps = 33/215 (15%)
Query: 308 PPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM 367
P ++ ++L G PG+GKT+ AH A + +E+NASD R+ IE + + ++
Sbjct: 34 PDHREAVVLYGSPGIGKTSAAHALANDMDWPTIELNASDSRTKDVIEQVAGEAAKSGTLA 93
Query: 368 ADSRPKCLVI-DEIDGALGD-GKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKG 425
+ LVI DE D G+ +G I +V KE Q
Sbjct: 94 QGGSGRRLVILDEADNLHGNVDRGGTRAITSLV--------------KEAQ--------- 130
Query: 426 CKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSI 485
+P++ I N+ Y + + LR + F S +V L+ IC E +
Sbjct: 131 -------QPIVLIANEFYEMS-KGLRNACRDIEFRDVSTRSIVPVLRDICRQEDVGFEKE 182
Query: 486 ALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDI 520
AL +AE + D+R +N LQ + + ++ + D+
Sbjct: 183 ALRKIAEMNDGDLRGAINDLQAIAEGRDTVTEDDV 217
>gi|157870127|ref|XP_001683614.1| putative replication factor C, subunit 1 [Leishmania major strain
Friedlin]
gi|68126680|emb|CAJ04631.1| putative replication factor C, subunit 1 [Leishmania major strain
Friedlin]
Length = 661
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 88/204 (43%), Gaps = 37/204 (18%)
Query: 308 PPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM 367
P + +LL G PG+GKTT +V A G VVE NASD RS +++ + D++ ++
Sbjct: 60 PKKPHGVLLSGSPGVGKTTTVYVVAHELGRTVVEYNASDFRSRKSLKENVSDLINNHAFS 119
Query: 368 ADSRPKC---LVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKK 424
A + L++DE+DG G G V +LK
Sbjct: 120 ARATSYTNVILLMDEVDGCDIGGVGEVIEMLK---------------------------- 151
Query: 425 GCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRL-KHICNNESMKTS 483
S P++C CND + P LRSL + F P + V + L + E + S
Sbjct: 152 -----STRIPILCTCNDRWHPKLRSLLNYVEDMRFSHPPCTIVANYLCDRVLAREGISLS 206
Query: 484 SIALTTLAEYTECDIRSCLNTLQF 507
L + + + DIR+ LN LQ
Sbjct: 207 KPLLQDIIKNSGSDIRNMLNNLQL 230
>gi|448411517|ref|ZP_21575918.1| replication factor C large subunit [Halosimplex carlsbadense 2-9-1]
gi|445670089|gb|ELZ22693.1| replication factor C large subunit [Halosimplex carlsbadense 2-9-1]
Length = 492
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 102/228 (44%), Gaps = 36/228 (15%)
Query: 311 QKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA-D 369
++ ++L G PG+GKT+ AH A G+ +E+NASD R+ IE + + ++ A +
Sbjct: 36 REAVVLHGSPGIGKTSAAHALASDEGWATIELNASDSRTKDVIERVAGEAAKSGTLTAGE 95
Query: 370 SRPKCLVIDEIDGALGD-GKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCKK 428
+ + +++DE D G+ +G I +V K+
Sbjct: 96 AGRRVVILDEADNLHGNVDRGGSAAITSLV----------------------------KE 127
Query: 429 ASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNNESMKTSSIALT 488
AS +P+I I N+ Y + LR + F S +V L+ +C E ++ AL
Sbjct: 128 AS--QPMILIANEFYDMS-NGLRNACQDIEFRDVSKRSIVPVLRDLCRKEGVEYDDAALD 184
Query: 489 TLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFD 536
+AE D+R + LQ + + ++ + D+ V G +D + F+
Sbjct: 185 QIAEMNSGDLRGAIKDLQAMAEGRDRIGADDV---VTGERDKTEGVFN 229
>gi|223477728|ref|YP_002582170.1| replication factor C large subunit [Thermococcus sp. AM4]
gi|214032954|gb|EEB73782.1| Replication factor C large subunit [Thermococcus sp. AM4]
Length = 498
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 104/245 (42%), Gaps = 41/245 (16%)
Query: 298 SWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKI 357
+W + PP++K L+L GPPG+GKTT + A G+ V+E+NASD+R+ IE +
Sbjct: 29 AWIEAWLHGNPPKKKALILAGPPGVGKTTTVYALANEYGFEVIELNASDERTYEKIERYV 88
Query: 358 LDVVQMNSVMADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQP 417
M+ + R K + +DE D + GA E I K++ +R N
Sbjct: 89 QAAYTMD--ILGKRRKLIFLDEADNI--EPSGARE-IAKLI--DRAKN------------ 129
Query: 418 EKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHICNN 477
P+I N Y R +R A + + + + ++ L I
Sbjct: 130 ----------------PIIMSANH-YWEVPREIRNRALIVQYKRLTQRDIIKALVRILKR 172
Query: 478 ESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAFDI 537
E L +A D+R+ +N LQ + + ++ +V+ +D+ +S F
Sbjct: 173 EGKTVPKEILYEIARRANGDLRAAINDLQTV-----VTGGVEDAREVLAYRDVEKSVFQA 227
Query: 538 WKEIF 542
++F
Sbjct: 228 LAQVF 232
>gi|154296999|ref|XP_001548928.1| hypothetical protein BC1G_12588 [Botryotinia fuckeliana B05.10]
Length = 483
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 43/62 (69%)
Query: 309 PEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVMA 368
P +K+LLL GPPGLGKTTLAHV A+ GY V+E+NASD+RS ++ +I V +V
Sbjct: 402 PHRKILLLTGPPGLGKTTLAHVCARQAGYEVMEINASDERSRDVVKGRIRTSVGTENVKT 461
Query: 369 DS 370
S
Sbjct: 462 GS 463
Score = 48.9 bits (115), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 198 LWVDKYAPNSFTELLSDEQTNREVLLWLKQWDSCVF 233
+W +KY F EL D++T+R+VL WLK WD VF
Sbjct: 345 MWTEKYRARHFMELCGDDRTHRQVLRWLKAWDPIVF 380
>gi|390938548|ref|YP_006402286.1| replication factor C [Desulfurococcus fermentans DSM 16532]
gi|390191655|gb|AFL66711.1| Replication factor C [Desulfurococcus fermentans DSM 16532]
Length = 326
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 44/201 (21%)
Query: 314 LLLCGPPGLGKTTLAHVAAKHCGY------HVVEVNASDDRSSSTIENKILDVVQMNSVM 367
+L GPPG GKTT+AH A H Y +++E+NASD+R I K+ + + V+
Sbjct: 43 MLFAGPPGTGKTTIAHCLA-HDLYGDDYRKYMLELNASDERKIEVIRGKVKEFARAR-VV 100
Query: 368 ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKKGCK 427
D K +++DE D D + A+ ++++ SA + + + P KI
Sbjct: 101 GDVPFKIVLLDEADNMTADAQQALRRLMELYSATTRF------ILTANYPSKI------- 147
Query: 428 KASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSR--VVSRLKHICNNESMKTSSI 485
+ P+ ++ +F +SR VV RLK+ICN E ++ +
Sbjct: 148 ----IEPI-----------------QSRTAIFRFSPLSREDVVGRLKYICNAEKIECAEK 186
Query: 486 ALTTLAEYTECDIRSCLNTLQ 506
AL T+ E +E D+R +N LQ
Sbjct: 187 ALETIYELSEGDMRRAINILQ 207
>gi|339898374|ref|XP_001465928.2| putative replication factor C, subunit 1 [Leishmania infantum
JPCM5]
gi|321399537|emb|CAM68360.2| putative replication factor C, subunit 1 [Leishmania infantum
JPCM5]
Length = 660
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 89/204 (43%), Gaps = 37/204 (18%)
Query: 308 PPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVV--QMNS 365
P + +LL G PG+GKTT +V A G VVE NASD RS +++ + D++ + S
Sbjct: 60 PKKPHGVLLSGSPGVGKTTTVYVVAHELGRTVVEYNASDFRSRKSLKENVSDLISNRAFS 119
Query: 366 VMADSRPKC-LVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKK 424
V A S L++DE+DG G G V +LK
Sbjct: 120 VSATSYTNVILLMDEVDGCDIGGVGEVIEMLK---------------------------- 151
Query: 425 GCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRL-KHICNNESMKTS 483
S P++C CND + P LRSL + F P + V + L + E + S
Sbjct: 152 -----STRIPILCTCNDRWHPKLRSLLNYVEDMRFSHPPCNIVANYLCDRVLAREGISLS 206
Query: 484 SIALTTLAEYTECDIRSCLNTLQF 507
L + + + DIR+ LN LQ
Sbjct: 207 KPLLQDIIKNSGSDIRNMLNNLQL 230
>gi|398016007|ref|XP_003861192.1| replication factor C, subunit 1, putative [Leishmania donovani]
gi|322499417|emb|CBZ34490.1| replication factor C, subunit 1, putative [Leishmania donovani]
Length = 660
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 87/204 (42%), Gaps = 37/204 (18%)
Query: 308 PPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKILDVVQMNSVM 367
P + +LL G PG+GKTT +V A G VVE NASD RS +++ + D++ +
Sbjct: 60 PKKPHGVLLSGSPGVGKTTTVYVVAHELGRTVVEYNASDFRSRKSLKENVSDLISNRAFS 119
Query: 368 ADSRPKC---LVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKEDQPEKISKKK 424
A + L++DE+DG G G V +LK
Sbjct: 120 ASATSYTNVILLMDEVDGCDIGGVGEVIEMLK---------------------------- 151
Query: 425 GCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRL-KHICNNESMKTS 483
S P++C CND + P LRSL + F P + V + L + E + S
Sbjct: 152 -----STRIPILCTCNDRWHPKLRSLLNYVEDMRFSHPPCNIVANYLCDRVLAREGISLS 206
Query: 484 SIALTTLAEYTECDIRSCLNTLQF 507
L + + + DIR+ LN LQ
Sbjct: 207 KPLLQDIIKNSGSDIRNMLNNLQL 230
>gi|358346970|ref|XP_003637536.1| NBS-containing resistance-like protein, partial [Medicago
truncatula]
gi|355503471|gb|AES84674.1| NBS-containing resistance-like protein, partial [Medicago
truncatula]
Length = 74
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/59 (64%), Positives = 47/59 (79%), Gaps = 1/59 (1%)
Query: 398 VSAERKSNTAKENVAKEDQPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKV 456
+SAE+K + K+++ K Q E+ S KKG K ASL RPVICICNDLYAPALRSLRQ+AK+
Sbjct: 11 ISAEKKPDAGKQSLDK-GQMERKSSKKGRKTASLSRPVICICNDLYAPALRSLRQVAKL 68
>gi|260792464|ref|XP_002591235.1| hypothetical protein BRAFLDRAFT_106463 [Branchiostoma floridae]
gi|229276438|gb|EEN47246.1| hypothetical protein BRAFLDRAFT_106463 [Branchiostoma floridae]
Length = 345
Score = 73.6 bits (179), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 39/50 (78%), Gaps = 7/50 (14%)
Query: 296 QDSWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNAS 345
+DSW + P++KV LLCGPPGLGKTTLAHV A+H GY+VVE+NAS
Sbjct: 301 EDSWKR-------PQKKVALLCGPPGLGKTTLAHVIARHAGYNVVEMNAS 343
>gi|14590059|ref|NP_142123.1| replication factor C large subunit [Pyrococcus horikoshii OT3]
gi|42559336|sp|O57853.1|RFCL_PYRHO RecName: Full=Replication factor C large subunit; Short=RFC large
subunit; AltName: Full=Clamp loader large subunit
gi|3256499|dbj|BAA29182.1| 468aa long hypothetical replication factor C subunit [Pyrococcus
horikoshii OT3]
Length = 468
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 112/269 (41%), Gaps = 45/269 (16%)
Query: 298 SWHKKTRSTGPPEQKVLLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSSSTIENKI 357
+W + PP++K LLL GPPG GKTT + A + V+E+NASD+R+ NKI
Sbjct: 30 AWIESWLHGNPPKKKALLLAGPPGSGKTTTVYALAHEYNFEVIELNASDERTY----NKI 85
Query: 358 LDVVQMNSVM--ADSRPKCLVIDEIDGALGDGKGAVEVILKMVSAERKSNTAKENVAKED 415
VQ M R K + +DE D + GA E I K++ R
Sbjct: 86 ARYVQAAYTMDIMGKRRKIIFLDEADNI--EPSGAPE-IAKLIDKARN------------ 130
Query: 416 QPEKISKKKGCKKASLLRPVICICNDLYAPALRSLRQIAKVHVFIQPSVSRVVSRLKHIC 475
P+I N Y + +R A++ + + + V+S L I
Sbjct: 131 ------------------PIIMAANH-YWEVPKEIRDRAELVEYKRLNQRDVISALVRIL 171
Query: 476 NNESMKTSSIALTTLAEYTECDIRSCLNTLQFLDKKKEILNVMDIGSQVVGRKDMSRSAF 535
E + LT +A+ + D+R+ +N LQ + + + V+ +D+ ++ F
Sbjct: 172 KREGITVPKEILTEIAKRSSGDLRAAINDLQTI-----VAGGYEDAKYVLAYRDVEKTVF 226
Query: 536 DIWKEIFQKRKTKRLRNSVSSSSNVSNEF 564
+F KR + ++ + +EF
Sbjct: 227 QSLGMVFSSDNAKRAKLALMNLDMSPDEF 255
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.130 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,751,432,374
Number of Sequences: 23463169
Number of extensions: 638729555
Number of successful extensions: 2330047
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1427
Number of HSP's successfully gapped in prelim test: 4259
Number of HSP's that attempted gapping in prelim test: 2318792
Number of HSP's gapped (non-prelim): 11968
length of query: 948
length of database: 8,064,228,071
effective HSP length: 152
effective length of query: 796
effective length of database: 8,792,793,679
effective search space: 6999063768484
effective search space used: 6999063768484
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 82 (36.2 bits)