BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 002248
         (947 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9UPS8|ANR26_HUMAN Ankyrin repeat domain-containing protein 26 OS=Homo sapiens
           GN=ANKRD26 PE=1 SV=3
          Length = 1709

 Score = 35.8 bits (81), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 103/201 (51%), Gaps = 26/201 (12%)

Query: 494 RLEDKIKQQSEEYSESLISINELECQVKELKRELDKQAQEFEDDIDAVTHAKTEQEQRAI 553
           ++EDK+     E SE+           KE+K +L+ Q  E+E ++ ++  +  ++E+   
Sbjct: 754 KMEDKVNVLQRELSET-----------KEIKSQLEHQKVEWERELCSLRFSLNQEEE--- 799

Query: 554 RAEEELRKTRWKNTVTAERLQDEFRRLSVDMASKFDENEKLAMKAMTEANEQRMQKAHLE 613
                  K R  +T+  E+++++ RR       + +  ++L +   T   E R  K++L 
Sbjct: 800 -------KRRNADTL-YEKIREQLRRKEEQYRKEVEVKQQLELSLQTLEMELRTVKSNLN 851

Query: 614 EMLQKAND-ELSLIKDQNGVKLQE--LSDQLEQKDKQIQKMYLELDHSSSQLIDEHKSEA 670
           +++Q+ ND +  L ++QN   LQ+  L++ L  K K+I+    +++  +S   +E K  +
Sbjct: 852 QVVQERNDAQRQLSREQNARMLQDGILTNHL-SKQKEIEMAQKKMNSENSHSHEEEKDLS 910

Query: 671 QKHEALSTEIHMLRTEIEKLR 691
            K+  L  EI MLR EI+ ++
Sbjct: 911 HKNSMLQEEIAMLRLEIDTIK 931


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.308    0.125    0.329 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 319,556,146
Number of Sequences: 539616
Number of extensions: 13698462
Number of successful extensions: 112870
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 4933
Number of HSP's that attempted gapping in prelim test: 71624
Number of HSP's gapped (non-prelim): 21029
length of query: 947
length of database: 191,569,459
effective HSP length: 127
effective length of query: 820
effective length of database: 123,038,227
effective search space: 100891346140
effective search space used: 100891346140
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 66 (30.0 bits)