Query 002250
Match_columns 947
No_of_seqs 897 out of 6501
Neff 9.5
Searched_HMMs 46136
Date Thu Mar 28 19:52:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002250.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002250hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 4E-111 8E-116 1063.5 64.1 882 1-924 35-955 (968)
2 PLN00113 leucine-rich repeat r 100.0 3.1E-57 6.7E-62 572.6 32.4 491 61-555 69-588 (968)
3 KOG1187 Serine/threonine prote 100.0 9E-50 1.9E-54 436.5 26.0 287 616-923 61-355 (361)
4 KOG0581 Mitogen-activated prot 100.0 3E-46 6.6E-51 382.1 17.9 254 629-916 79-335 (364)
5 KOG0192 Tyrosine kinase specif 100.0 1.7E-45 3.6E-50 399.1 23.6 259 630-922 42-305 (362)
6 KOG0197 Tyrosine kinases [Sign 100.0 1.4E-45 3.1E-50 395.6 14.0 255 630-921 207-462 (468)
7 KOG0595 Serine/threonine-prote 100.0 7.7E-44 1.7E-48 367.0 18.4 200 628-850 9-215 (429)
8 KOG0575 Polo-like serine/threo 100.0 2.2E-43 4.8E-48 381.7 21.7 251 629-916 18-269 (592)
9 KOG0615 Serine/threonine prote 100.0 7.5E-44 1.6E-48 365.9 14.5 263 625-916 168-437 (475)
10 KOG0591 NIMA (never in mitosis 100.0 3.5E-44 7.5E-49 349.9 9.5 259 628-918 18-283 (375)
11 KOG1026 Nerve growth factor re 100.0 7.4E-44 1.6E-48 400.6 13.3 262 629-924 486-766 (774)
12 KOG0598 Ribosomal protein S6 k 100.0 2E-42 4.4E-47 354.1 16.2 260 628-923 24-284 (357)
13 KOG0582 Ste20-like serine/thre 100.0 1.1E-40 2.4E-45 345.9 21.5 263 628-915 25-292 (516)
14 KOG0193 Serine/threonine prote 100.0 1.7E-41 3.8E-46 364.4 15.1 262 628-922 391-655 (678)
15 KOG0472 Leucine-rich repeat pr 100.0 3.1E-45 6.6E-50 373.2 -13.1 470 40-529 49-541 (565)
16 KOG0592 3-phosphoinositide-dep 100.0 5.4E-41 1.2E-45 356.4 17.8 254 628-916 72-338 (604)
17 KOG0196 Tyrosine kinase, EPH ( 100.0 4.3E-42 9.3E-47 377.0 8.9 276 629-940 629-912 (996)
18 KOG0593 Predicted protein kina 100.0 2.4E-41 5.3E-46 333.4 12.2 264 629-915 2-283 (396)
19 KOG0198 MEKK and related serin 100.0 7.1E-41 1.5E-45 351.0 16.2 259 629-921 17-281 (313)
20 KOG0661 MAPK related serine/th 100.0 2.1E-41 4.5E-46 354.0 12.0 266 626-916 7-291 (538)
21 KOG1094 Discoidin domain recep 100.0 3.7E-40 8.1E-45 350.5 18.6 265 629-920 538-804 (807)
22 KOG4194 Membrane glycoprotein 100.0 9.6E-42 2.1E-46 362.3 6.3 376 162-562 82-463 (873)
23 KOG4721 Serine/threonine prote 100.0 5.9E-41 1.3E-45 354.7 12.1 244 632-923 127-371 (904)
24 KOG1095 Protein tyrosine kinas 100.0 1.1E-40 2.4E-45 389.1 14.5 273 629-935 692-976 (1025)
25 KOG0600 Cdc2-related protein k 100.0 6.1E-40 1.3E-44 345.6 16.8 267 628-915 116-399 (560)
26 KOG0659 Cdk activating kinase 100.0 1.4E-39 3.1E-44 316.0 17.5 265 629-916 2-281 (318)
27 KOG0578 p21-activated serine/t 100.0 8.2E-40 1.8E-44 351.2 16.9 268 628-933 272-540 (550)
28 cd05102 PTKc_VEGFR3 Catalytic 100.0 1.2E-39 2.5E-44 362.6 18.2 260 629-921 7-335 (338)
29 KOG0472 Leucine-rich repeat pr 100.0 4.1E-44 8.8E-49 365.1 -16.8 480 55-551 39-541 (565)
30 KOG0194 Protein tyrosine kinas 100.0 4.3E-40 9.3E-45 360.0 12.4 263 629-925 157-425 (474)
31 KOG0597 Serine-threonine prote 100.0 9.1E-40 2E-44 346.3 13.6 248 629-915 2-250 (808)
32 KOG0616 cAMP-dependent protein 100.0 2.7E-39 5.9E-44 318.7 15.8 263 628-930 43-307 (355)
33 KOG0201 Serine/threonine prote 100.0 4.1E-40 9E-45 341.9 10.2 257 629-923 13-272 (467)
34 KOG4194 Membrane glycoprotein 100.0 1.4E-40 3.1E-45 353.5 5.8 388 87-502 54-448 (873)
35 KOG3653 Transforming growth fa 100.0 1.8E-38 4E-43 331.7 20.8 265 629-923 210-506 (534)
36 KOG0583 Serine/threonine prote 100.0 3.9E-38 8.3E-43 345.5 22.8 254 627-914 15-273 (370)
37 cd05096 PTKc_DDR1 Catalytic do 100.0 6.1E-38 1.3E-42 343.4 21.6 264 629-919 5-304 (304)
38 KOG0588 Serine/threonine prote 100.0 3.2E-38 6.9E-43 342.0 17.6 252 628-917 11-264 (786)
39 cd05104 PTKc_Kit Catalytic dom 100.0 5.4E-38 1.2E-42 352.7 19.0 259 628-919 34-373 (375)
40 KOG0585 Ca2+/calmodulin-depend 100.0 6.1E-38 1.3E-42 327.3 17.3 272 625-919 93-375 (576)
41 PHA02988 hypothetical protein; 100.0 1.8E-37 3.9E-42 335.1 21.8 250 635-922 26-281 (283)
42 cd05106 PTKc_CSF-1R Catalytic 100.0 4.8E-38 1E-42 352.8 17.8 260 628-920 37-372 (374)
43 cd05048 PTKc_Ror Catalytic Dom 100.0 1.5E-37 3.3E-42 336.8 19.9 258 629-920 5-283 (283)
44 cd05631 STKc_GRK4 Catalytic do 100.0 1.2E-37 2.6E-42 337.5 18.0 253 631-915 2-260 (285)
45 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.8E-37 3.9E-42 332.7 18.7 256 629-920 5-265 (266)
46 KOG4257 Focal adhesion tyrosin 100.0 8.3E-38 1.8E-42 334.2 15.6 254 631-921 391-650 (974)
47 KOG0694 Serine/threonine prote 100.0 1.6E-37 3.5E-42 339.9 18.0 245 628-910 367-613 (694)
48 KOG0663 Protein kinase PITSLRE 100.0 5.7E-37 1.2E-41 306.7 20.2 267 627-916 74-361 (419)
49 KOG4278 Protein tyrosine kinas 100.0 5.7E-38 1.2E-42 334.6 13.7 253 630-919 268-522 (1157)
50 KOG0580 Serine/threonine prote 100.0 1E-37 2.2E-42 298.8 13.8 252 628-916 21-273 (281)
51 PF07714 Pkinase_Tyr: Protein 100.0 3.4E-38 7.4E-43 336.5 11.8 251 633-917 3-259 (259)
52 cd05072 PTKc_Lyn Catalytic dom 100.0 3.4E-37 7.4E-42 329.7 19.5 255 629-920 6-261 (261)
53 KOG2052 Activin A type IB rece 100.0 6.4E-37 1.4E-41 317.8 20.7 273 622-924 204-507 (513)
54 cd05105 PTKc_PDGFR_alpha Catal 100.0 3.1E-37 6.6E-42 347.2 19.7 261 628-921 36-398 (400)
55 KOG0605 NDR and related serine 100.0 4.9E-37 1.1E-41 327.0 20.0 248 628-909 140-435 (550)
56 KOG0611 Predicted serine/threo 100.0 9.8E-38 2.1E-42 317.9 13.1 252 628-918 52-305 (668)
57 cd05114 PTKc_Tec_Rlk Catalytic 100.0 6.3E-37 1.4E-41 326.6 19.9 252 629-918 4-256 (256)
58 KOG0658 Glycogen synthase kina 100.0 7.8E-38 1.7E-42 319.6 11.9 258 629-915 24-305 (364)
59 cd05068 PTKc_Frk_like Catalyti 100.0 1.2E-36 2.6E-41 325.5 21.2 255 629-920 6-261 (261)
60 cd05612 STKc_PRKX_like Catalyt 100.0 4.7E-37 1E-41 333.7 17.8 248 629-916 1-254 (291)
61 cd05049 PTKc_Trk Catalytic dom 100.0 7.2E-37 1.6E-41 330.9 19.0 257 629-919 5-280 (280)
62 PTZ00263 protein kinase A cata 100.0 6.5E-37 1.4E-41 338.4 18.9 249 628-916 17-271 (329)
63 cd05054 PTKc_VEGFR Catalytic d 100.0 4.7E-37 1E-41 340.1 17.8 261 629-922 7-335 (337)
64 cd05108 PTKc_EGFR Catalytic do 100.0 1.5E-36 3.3E-41 334.1 21.7 262 629-926 7-274 (316)
65 cd05033 PTKc_EphR Catalytic do 100.0 1.1E-36 2.4E-41 326.8 20.1 257 629-920 4-265 (266)
66 KOG0589 Serine/threonine prote 100.0 1.7E-37 3.6E-42 332.9 13.5 254 628-916 3-258 (426)
67 cd05571 STKc_PKB Catalytic dom 100.0 8.1E-37 1.8E-41 336.9 19.3 245 635-916 1-251 (323)
68 cd05052 PTKc_Abl Catalytic dom 100.0 2.8E-36 6.1E-41 322.9 22.7 255 629-920 6-262 (263)
69 cd05062 PTKc_IGF-1R Catalytic 100.0 6.8E-37 1.5E-41 330.4 18.0 258 628-919 5-277 (277)
70 KOG2345 Serine/threonine prote 100.0 2.3E-37 5E-42 297.6 12.6 262 629-921 21-301 (302)
71 cd05090 PTKc_Ror1 Catalytic do 100.0 1E-36 2.3E-41 330.1 19.0 258 629-920 5-283 (283)
72 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.4E-36 3.1E-41 323.6 19.6 252 629-918 4-256 (256)
73 cd06649 PKc_MEK2 Catalytic dom 100.0 3.6E-36 7.9E-41 332.9 23.5 263 629-917 5-302 (331)
74 KOG0610 Putative serine/threon 100.0 9.2E-37 2E-41 314.5 17.2 262 629-921 77-393 (459)
75 cd07862 STKc_CDK6 Catalytic do 100.0 1.7E-36 3.8E-41 329.7 19.9 262 630-915 2-286 (290)
76 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.1E-36 2.3E-41 325.9 17.8 256 628-920 5-261 (261)
77 KOG0033 Ca2+/calmodulin-depend 100.0 4.3E-38 9.4E-43 301.0 6.2 253 628-915 10-266 (355)
78 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.5E-36 3.3E-41 336.6 19.4 255 630-916 2-257 (333)
79 KOG0199 ACK and related non-re 100.0 2.1E-37 4.5E-42 335.4 12.0 260 629-923 110-375 (1039)
80 cd07871 STKc_PCTAIRE3 Catalyti 100.0 3E-36 6.5E-41 327.1 20.9 263 629-916 5-285 (288)
81 cd05111 PTK_HER3 Pseudokinase 100.0 4.4E-36 9.6E-41 324.2 22.1 264 629-928 7-276 (279)
82 cd05607 STKc_GRK7 Catalytic do 100.0 2.2E-36 4.8E-41 326.1 19.6 256 637-923 1-257 (277)
83 KOG0660 Mitogen-activated prot 100.0 6E-37 1.3E-41 312.6 14.2 266 627-916 20-310 (359)
84 PTZ00267 NIMA-related protein 100.0 1.1E-36 2.5E-41 352.3 18.5 252 629-915 67-322 (478)
85 cd05585 STKc_YPK1_like Catalyt 100.0 1.9E-36 4.2E-41 332.3 19.3 242 637-915 1-246 (312)
86 KOG1989 ARK protein kinase fam 100.0 1.8E-36 3.9E-41 343.3 19.4 262 630-929 38-322 (738)
87 KOG0599 Phosphorylase kinase g 100.0 3.2E-37 7E-42 299.3 11.2 263 625-916 13-283 (411)
88 PTZ00426 cAMP-dependent protei 100.0 1.8E-36 4E-41 335.3 18.9 249 628-916 29-284 (340)
89 cd07869 STKc_PFTAIRE1 Catalyti 100.0 4.3E-36 9.3E-41 328.5 21.6 265 628-915 4-287 (303)
90 cd05093 PTKc_TrkB Catalytic do 100.0 2E-36 4.3E-41 328.7 18.8 260 629-923 5-282 (288)
91 cd05091 PTKc_Ror2 Catalytic do 100.0 1.2E-36 2.7E-41 329.6 17.1 258 629-920 5-283 (283)
92 cd05071 PTKc_Src Catalytic dom 100.0 5.2E-36 1.1E-40 320.6 21.4 254 629-920 6-260 (262)
93 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 4.8E-36 1.1E-40 320.6 21.1 254 628-919 5-259 (260)
94 cd05595 STKc_PKB_beta Catalyti 100.0 3.1E-36 6.7E-41 332.1 20.0 245 635-916 1-251 (323)
95 cd07848 STKc_CDKL5 Catalytic d 100.0 2.7E-36 5.9E-41 327.6 19.2 265 629-915 1-283 (287)
96 cd05084 PTKc_Fes Catalytic dom 100.0 3.4E-36 7.3E-41 320.2 19.4 250 635-919 1-252 (252)
97 cd05067 PTKc_Lck_Blk Catalytic 100.0 5.2E-36 1.1E-40 320.3 20.9 255 628-920 5-260 (260)
98 PTZ00283 serine/threonine prot 100.0 2.1E-36 4.5E-41 349.8 19.2 256 628-916 31-297 (496)
99 cd05094 PTKc_TrkC Catalytic do 100.0 2.6E-36 5.6E-41 328.3 18.6 259 629-922 5-284 (291)
100 KOG0594 Protein kinase PCTAIRE 100.0 2.1E-36 4.5E-41 310.5 16.7 272 628-921 10-309 (323)
101 KOG1025 Epidermal growth facto 100.0 1.8E-36 3.9E-41 333.7 16.8 262 632-929 699-966 (1177)
102 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 3.5E-36 7.5E-41 326.0 19.0 270 629-921 3-282 (283)
103 cd05059 PTKc_Tec_like Catalyti 100.0 4.9E-36 1.1E-40 319.7 19.8 252 629-918 4-256 (256)
104 cd05593 STKc_PKB_gamma Catalyt 100.0 4.7E-36 1E-40 331.2 20.2 245 635-916 1-251 (328)
105 KOG0444 Cytoskeletal regulator 100.0 5.5E-39 1.2E-43 342.8 -3.1 372 132-535 6-381 (1255)
106 PHA03212 serine/threonine kina 100.0 6.8E-36 1.5E-40 336.2 21.8 257 629-915 92-375 (391)
107 cd08228 STKc_Nek6 Catalytic do 100.0 1.1E-35 2.4E-40 319.2 22.3 262 629-921 2-266 (267)
108 cd05061 PTKc_InsR Catalytic do 100.0 4.7E-36 1E-40 325.7 19.5 259 628-920 5-278 (288)
109 cd05069 PTKc_Yes Catalytic dom 100.0 1.1E-35 2.3E-40 317.9 21.8 253 629-919 6-259 (260)
110 PLN00034 mitogen-activated pro 100.0 4.2E-36 9.1E-41 335.6 19.4 249 629-916 74-328 (353)
111 cd05107 PTKc_PDGFR_beta Cataly 100.0 9.3E-36 2E-40 334.9 22.1 260 628-920 36-399 (401)
112 cd05035 PTKc_Axl_like Catalyti 100.0 7.8E-36 1.7E-40 321.5 20.5 257 631-920 1-272 (273)
113 cd05584 STKc_p70S6K Catalytic 100.0 7.2E-36 1.6E-40 329.4 20.6 246 635-916 2-256 (323)
114 cd05592 STKc_nPKC_theta_delta 100.0 1.5E-35 3.3E-40 325.5 23.1 243 635-914 1-245 (316)
115 cd05605 STKc_GRK4_like Catalyt 100.0 3.4E-36 7.3E-41 326.1 17.5 255 630-916 1-261 (285)
116 cd05055 PTKc_PDGFR Catalytic d 100.0 1E-35 2.2E-40 325.0 21.4 260 628-920 34-301 (302)
117 cd05032 PTKc_InsR_like Catalyt 100.0 4.7E-36 1E-40 324.0 18.2 258 628-919 5-277 (277)
118 KOG0574 STE20-like serine/thre 100.0 6.1E-38 1.3E-42 307.8 3.1 255 629-923 33-292 (502)
119 cd06650 PKc_MEK1 Catalytic dom 100.0 2.2E-35 4.7E-40 326.7 23.8 199 629-851 5-204 (333)
120 cd05053 PTKc_FGFR Catalytic do 100.0 3.9E-36 8.5E-41 327.4 17.1 259 628-920 11-291 (293)
121 cd05036 PTKc_ALK_LTK Catalytic 100.0 7E-36 1.5E-40 322.5 18.7 258 628-919 5-277 (277)
122 cd05097 PTKc_DDR_like Catalyti 100.0 1.4E-35 3E-40 323.2 21.2 264 629-919 5-295 (295)
123 cd05092 PTKc_TrkA Catalytic do 100.0 6.9E-36 1.5E-40 323.0 18.6 256 629-919 5-280 (280)
124 cd05101 PTKc_FGFR2 Catalytic d 100.0 8E-36 1.7E-40 326.6 19.3 262 628-923 14-299 (304)
125 cd08529 STKc_FA2-like Catalyti 100.0 9.3E-36 2E-40 317.6 19.2 252 630-916 1-253 (256)
126 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 4.5E-35 9.6E-40 314.5 24.2 261 629-921 2-266 (267)
127 cd05051 PTKc_DDR Catalytic dom 100.0 2.6E-35 5.6E-40 321.5 22.5 264 629-919 5-296 (296)
128 cd05045 PTKc_RET Catalytic dom 100.0 1.5E-35 3.2E-40 322.2 20.5 259 630-922 1-288 (290)
129 cd05082 PTKc_Csk Catalytic dom 100.0 4E-35 8.7E-40 312.7 23.3 249 629-920 6-256 (256)
130 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.4E-35 3E-40 325.1 20.3 261 628-922 17-301 (307)
131 cd05589 STKc_PKN Catalytic dom 100.0 1.4E-35 3E-40 327.4 20.2 247 631-915 1-256 (324)
132 cd05590 STKc_nPKC_eta Catalyti 100.0 2E-35 4.3E-40 325.2 21.3 239 635-910 1-241 (320)
133 cd05575 STKc_SGK Catalytic dom 100.0 1.2E-35 2.6E-40 327.8 19.5 240 635-911 1-242 (323)
134 cd05050 PTKc_Musk Catalytic do 100.0 1.1E-35 2.3E-40 323.1 18.8 258 628-919 4-288 (288)
135 cd05034 PTKc_Src_like Catalyti 100.0 1.6E-35 3.5E-40 316.8 19.9 256 628-920 5-261 (261)
136 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.1E-35 2.5E-40 330.9 19.2 264 630-916 1-290 (338)
137 KOG0444 Cytoskeletal regulator 100.0 2E-38 4.4E-43 338.4 -2.8 385 59-523 5-393 (1255)
138 cd05628 STKc_NDR1 Catalytic do 100.0 2.9E-35 6.3E-40 330.0 22.6 204 629-851 1-238 (363)
139 cd05109 PTKc_HER2 Catalytic do 100.0 1.8E-35 3.8E-40 319.8 20.1 260 629-924 7-272 (279)
140 cd05043 PTK_Ryk Pseudokinase d 100.0 1.9E-35 4E-40 319.8 20.3 259 629-921 6-277 (280)
141 cd08229 STKc_Nek7 Catalytic do 100.0 2.1E-35 4.6E-40 317.1 20.5 261 629-920 2-265 (267)
142 cd05573 STKc_ROCK_NDR_like Cat 100.0 6.5E-36 1.4E-40 334.5 17.2 256 629-916 1-285 (350)
143 PRK13184 pknD serine/threonine 100.0 1.6E-35 3.4E-40 349.3 21.0 263 629-921 2-291 (932)
144 cd05614 STKc_MSK2_N N-terminal 100.0 1.4E-35 3.1E-40 328.8 19.5 256 630-916 1-267 (332)
145 cd05618 STKc_aPKC_iota Catalyt 100.0 1.6E-35 3.4E-40 327.2 19.7 245 635-910 1-250 (329)
146 cd05594 STKc_PKB_alpha Catalyt 100.0 8.6E-36 1.9E-40 329.2 17.6 245 635-916 1-252 (325)
147 cd05075 PTKc_Axl Catalytic dom 100.0 1.6E-35 3.5E-40 318.9 19.2 257 631-920 1-271 (272)
148 KOG0618 Serine/threonine phosp 100.0 6E-39 1.3E-43 359.5 -7.9 463 38-528 23-488 (1081)
149 cd05621 STKc_ROCK2 Catalytic d 100.0 2.7E-35 5.9E-40 329.7 21.2 256 628-916 42-304 (370)
150 cd05608 STKc_GRK1 Catalytic do 100.0 2.6E-35 5.7E-40 318.2 20.2 249 637-916 1-257 (280)
151 cd05591 STKc_nPKC_epsilon Cata 100.0 2.3E-35 5E-40 325.2 20.0 245 635-916 1-254 (321)
152 KOG4279 Serine/threonine prote 100.0 2.7E-36 5.8E-41 325.7 12.1 244 636-915 582-831 (1226)
153 cd05582 STKc_RSK_N N-terminal 100.0 6.6E-36 1.4E-40 329.2 15.7 240 635-912 2-245 (318)
154 cd05596 STKc_ROCK Catalytic do 100.0 3.3E-35 7.2E-40 329.5 21.6 256 628-916 42-304 (370)
155 cd05085 PTKc_Fer Catalytic dom 100.0 3E-35 6.4E-40 312.6 20.1 248 635-918 1-249 (250)
156 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.2E-35 2.5E-40 330.4 17.7 261 629-922 7-341 (343)
157 cd05620 STKc_nPKC_delta Cataly 100.0 2.4E-35 5.1E-40 324.0 19.9 243 635-914 1-246 (316)
158 cd05602 STKc_SGK1 Catalytic do 100.0 2.2E-35 4.7E-40 326.0 19.6 248 635-919 1-250 (325)
159 cd05588 STKc_aPKC Catalytic do 100.0 2.5E-35 5.3E-40 325.8 20.0 250 635-915 1-261 (329)
160 cd05570 STKc_PKC Catalytic dom 100.0 3.2E-35 6.9E-40 323.5 20.7 245 635-916 1-252 (318)
161 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.4E-35 3E-40 321.4 17.6 262 629-920 4-283 (284)
162 cd05626 STKc_LATS2 Catalytic d 100.0 4.8E-35 1E-39 330.3 22.6 256 630-916 2-305 (381)
163 cd08219 STKc_Nek3 Catalytic do 100.0 3.3E-35 7.2E-40 313.2 20.0 251 630-916 1-252 (255)
164 cd05095 PTKc_DDR2 Catalytic do 100.0 4.8E-35 1E-39 319.2 21.7 264 629-919 5-296 (296)
165 cd05116 PTKc_Syk Catalytic dom 100.0 2.6E-35 5.6E-40 314.3 19.2 249 636-920 2-255 (257)
166 cd05601 STKc_CRIK Catalytic do 100.0 1.6E-35 3.5E-40 328.0 18.3 256 629-916 1-263 (330)
167 KOG0032 Ca2+/calmodulin-depend 100.0 3.3E-35 7.2E-40 321.7 20.4 257 625-916 31-293 (382)
168 cd05587 STKc_cPKC Catalytic do 100.0 4.2E-35 9E-40 323.6 21.2 244 630-910 1-246 (324)
169 cd06625 STKc_MEKK3_like Cataly 100.0 6.6E-35 1.4E-39 312.4 22.2 257 629-916 2-260 (263)
170 cd05599 STKc_NDR_like Catalyti 100.0 2E-35 4.3E-40 332.1 18.9 256 629-916 1-296 (364)
171 cd05099 PTKc_FGFR4 Catalytic d 100.0 2.4E-35 5.2E-40 324.2 19.0 260 629-922 12-295 (314)
172 KOG0618 Serine/threonine phosp 100.0 5.7E-38 1.2E-42 351.7 -1.9 461 38-526 47-510 (1081)
173 cd05089 PTKc_Tie1 Catalytic do 100.0 2.1E-35 4.7E-40 322.0 18.4 259 629-924 2-279 (297)
174 cd05604 STKc_SGK3 Catalytic do 100.0 1.8E-35 3.9E-40 326.6 18.0 247 635-918 1-249 (325)
175 cd05619 STKc_nPKC_theta Cataly 100.0 9.1E-35 2E-39 319.2 23.3 243 635-914 1-246 (316)
176 cd05073 PTKc_Hck Catalytic dom 100.0 4.1E-35 8.8E-40 313.4 20.0 254 628-919 5-259 (260)
177 cd06646 STKc_MAP4K5 Catalytic 100.0 5.2E-35 1.1E-39 314.0 20.7 255 628-917 8-266 (267)
178 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 2.7E-35 5.8E-40 319.3 18.6 269 629-921 4-284 (284)
179 cd05115 PTKc_Zap-70 Catalytic 100.0 3.8E-35 8.2E-40 312.8 19.4 248 637-920 3-255 (257)
180 cd05066 PTKc_EphR_A Catalytic 100.0 3.4E-35 7.4E-40 315.3 19.2 257 629-920 4-266 (267)
181 PHA03211 serine/threonine kina 100.0 7.7E-35 1.7E-39 331.0 22.9 261 628-916 168-455 (461)
182 PTZ00036 glycogen synthase kin 100.0 2.7E-35 5.8E-40 336.8 19.2 259 629-916 66-351 (440)
183 cd05065 PTKc_EphR_B Catalytic 100.0 3E-35 6.5E-40 316.2 18.3 257 629-920 4-268 (269)
184 cd05603 STKc_SGK2 Catalytic do 100.0 4E-35 8.7E-40 323.4 19.7 240 635-911 1-242 (321)
185 cd05039 PTKc_Csk_like Catalyti 100.0 5.6E-35 1.2E-39 311.6 20.1 250 629-920 6-256 (256)
186 cd05063 PTKc_EphR_A2 Catalytic 100.0 4.8E-35 1E-39 314.5 19.7 257 629-920 5-267 (268)
187 KOG0577 Serine/threonine prote 100.0 2.8E-36 6E-41 320.7 9.9 265 629-932 26-294 (948)
188 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 7.8E-35 1.7E-39 312.9 21.3 254 635-918 1-268 (269)
189 cd05088 PTKc_Tie2 Catalytic do 100.0 2.6E-35 5.7E-40 322.0 17.8 258 629-923 7-283 (303)
190 cd05616 STKc_cPKC_beta Catalyt 100.0 5.1E-35 1.1E-39 322.7 20.3 244 630-910 1-246 (323)
191 cd05100 PTKc_FGFR3 Catalytic d 100.0 6E-35 1.3E-39 323.9 20.9 259 629-921 12-294 (334)
192 cd07863 STKc_CDK4 Catalytic do 100.0 5E-35 1.1E-39 317.9 19.7 263 630-915 1-284 (288)
193 cd05623 STKc_MRCK_alpha Cataly 100.0 6.5E-35 1.4E-39 323.1 20.8 258 629-916 1-266 (332)
194 cd05629 STKc_NDR_like_fungal C 100.0 5.2E-35 1.1E-39 329.9 19.9 256 629-916 1-305 (377)
195 cd05597 STKc_DMPK_like Catalyt 100.0 7.6E-35 1.6E-39 322.2 20.5 258 629-916 1-266 (331)
196 cd05622 STKc_ROCK1 Catalytic d 100.0 1.2E-34 2.6E-39 324.8 22.4 257 628-917 42-305 (371)
197 cd05044 PTKc_c-ros Catalytic d 100.0 4.7E-35 1E-39 314.7 18.3 251 635-919 1-269 (269)
198 cd05630 STKc_GRK6 Catalytic do 100.0 5.6E-35 1.2E-39 316.5 19.0 253 631-915 2-260 (285)
199 cd00192 PTKc Catalytic domain 100.0 8.2E-35 1.8E-39 311.3 20.1 250 635-918 1-262 (262)
200 cd06637 STKc_TNIK Catalytic do 100.0 5.1E-35 1.1E-39 315.0 18.5 252 627-915 4-268 (272)
201 cd05058 PTKc_Met_Ron Catalytic 100.0 5.5E-35 1.2E-39 312.9 18.4 252 635-921 1-260 (262)
202 KOG0596 Dual specificity; seri 100.0 1.5E-35 3.2E-40 314.8 13.6 251 629-916 361-627 (677)
203 cd05112 PTKc_Itk Catalytic dom 100.0 3.3E-34 7.1E-39 305.7 24.3 252 629-918 4-256 (256)
204 cd05040 PTKc_Ack_like Catalyti 100.0 1.6E-34 3.5E-39 308.3 21.5 251 635-919 1-257 (257)
205 PHA03207 serine/threonine kina 100.0 7.7E-35 1.7E-39 329.5 20.0 261 628-916 91-375 (392)
206 cd07876 STKc_JNK2 Catalytic do 100.0 1.1E-34 2.4E-39 325.1 20.9 265 626-916 18-315 (359)
207 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.2E-34 2.5E-39 318.1 20.7 262 629-915 6-285 (309)
208 cd05598 STKc_LATS Catalytic do 100.0 5E-35 1.1E-39 330.1 18.1 255 630-916 2-301 (376)
209 cd08223 STKc_Nek4 Catalytic do 100.0 2.1E-34 4.5E-39 307.4 21.9 252 630-916 1-254 (257)
210 cd06619 PKc_MKK5 Catalytic dom 100.0 1.9E-34 4E-39 311.6 21.6 249 630-916 2-253 (279)
211 cd05060 PTKc_Syk_like Catalyti 100.0 1.3E-34 2.7E-39 309.1 20.0 250 635-921 1-256 (257)
212 cd06654 STKc_PAK1 Catalytic do 100.0 2.1E-34 4.5E-39 313.8 22.0 251 628-916 19-270 (296)
213 cd05110 PTKc_HER4 Catalytic do 100.0 1.4E-34 2.9E-39 316.5 20.5 260 629-924 7-272 (303)
214 cd08221 STKc_Nek9 Catalytic do 100.0 2.1E-34 4.6E-39 307.2 21.5 253 630-917 1-254 (256)
215 cd05617 STKc_aPKC_zeta Catalyt 100.0 9.7E-35 2.1E-39 320.8 19.4 245 635-910 1-248 (327)
216 cd05625 STKc_LATS1 Catalytic d 100.0 8.8E-35 1.9E-39 328.7 19.4 203 630-851 2-250 (382)
217 cd05042 PTKc_Aatyk Catalytic d 100.0 1.6E-34 3.5E-39 310.5 20.5 253 636-918 2-268 (269)
218 cd07861 STKc_CDK1_euk Catalyti 100.0 1.1E-34 2.5E-39 314.6 19.5 265 630-916 1-282 (285)
219 cd05057 PTKc_EGFR_like Catalyt 100.0 2.1E-34 4.5E-39 311.4 21.5 261 629-925 7-273 (279)
220 cd05632 STKc_GRK5 Catalytic do 100.0 1.6E-34 3.5E-39 312.9 20.6 253 631-915 2-260 (285)
221 cd05047 PTKc_Tie Catalytic dom 100.0 1.3E-34 2.8E-39 311.3 19.6 249 635-920 1-268 (270)
222 cd08218 STKc_Nek1 Catalytic do 100.0 1.5E-34 3.4E-39 308.2 20.0 252 630-916 1-253 (256)
223 cd05041 PTKc_Fes_like Catalyti 100.0 1.7E-34 3.6E-39 307.0 19.9 250 635-919 1-251 (251)
224 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 3.6E-34 7.9E-39 306.1 22.5 240 635-918 1-262 (262)
225 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.4E-34 3E-39 310.7 19.2 258 630-915 1-263 (267)
226 cd05083 PTKc_Chk Catalytic dom 100.0 4E-34 8.6E-39 304.6 22.4 247 629-919 6-253 (254)
227 cd06642 STKc_STK25-YSK1 Cataly 100.0 8.4E-35 1.8E-39 314.1 17.4 249 629-916 4-253 (277)
228 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 2.2E-34 4.8E-39 312.0 20.8 261 629-923 5-273 (284)
229 KOG0667 Dual-specificity tyros 100.0 5.5E-35 1.2E-39 320.8 16.0 198 626-850 183-389 (586)
230 cd07874 STKc_JNK3 Catalytic do 100.0 1.3E-34 2.9E-39 324.1 19.6 264 626-916 14-311 (355)
231 cd05615 STKc_cPKC_alpha Cataly 100.0 1.9E-34 4.1E-39 317.9 20.3 243 631-910 2-246 (323)
232 cd08227 PK_STRAD_alpha Pseudok 100.0 2.9E-34 6.2E-39 317.5 21.5 265 633-916 2-307 (327)
233 cd07853 STKc_NLK Catalytic dom 100.0 1.4E-34 3E-39 325.9 18.9 262 630-916 1-288 (372)
234 cd05624 STKc_MRCK_beta Catalyt 100.0 1.5E-34 3.2E-39 319.8 18.8 258 629-916 1-266 (331)
235 cd06615 PKc_MEK Catalytic doma 100.0 3.7E-34 8.1E-39 313.7 21.7 261 630-916 2-287 (308)
236 KOG4717 Serine/threonine prote 100.0 1.1E-34 2.4E-39 303.9 16.5 265 625-927 14-283 (864)
237 cd05056 PTKc_FAK Catalytic dom 100.0 2E-34 4.2E-39 310.0 19.0 257 629-922 6-267 (270)
238 cd07868 STKc_CDK8 Catalytic do 100.0 3.1E-34 6.8E-39 316.1 21.1 196 634-852 6-219 (317)
239 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1.9E-34 4.2E-39 315.2 19.2 262 629-915 6-285 (301)
240 cd05086 PTKc_Aatyk2 Catalytic 100.0 5.3E-34 1.1E-38 306.1 22.2 253 636-918 2-267 (268)
241 cd06609 STKc_MST3_like Catalyt 100.0 2.1E-34 4.6E-39 310.5 19.0 249 629-916 1-251 (274)
242 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1.5E-34 3.2E-39 313.6 17.6 263 629-920 4-283 (284)
243 cd07875 STKc_JNK1 Catalytic do 100.0 2.7E-34 5.8E-39 322.6 20.2 264 626-916 21-318 (364)
244 PF00069 Pkinase: Protein kina 100.0 9E-35 1.9E-39 310.8 15.5 254 631-915 1-256 (260)
245 cd06631 STKc_YSK4 Catalytic do 100.0 4.2E-34 9E-39 306.6 20.6 257 630-915 1-261 (265)
246 cd06640 STKc_MST4 Catalytic do 100.0 4.8E-34 1E-38 308.1 21.1 249 629-916 4-253 (277)
247 PTZ00266 NIMA-related protein 100.0 2.5E-34 5.5E-39 340.3 20.2 263 625-920 9-301 (1021)
248 cd06656 STKc_PAK3 Catalytic do 100.0 3.6E-34 7.7E-39 312.1 19.8 258 627-922 17-277 (297)
249 cd06612 STKc_MST1_2 Catalytic 100.0 4.2E-34 9E-39 304.9 19.9 249 629-915 3-252 (256)
250 cd06655 STKc_PAK2 Catalytic do 100.0 5.5E-34 1.2E-38 310.3 21.0 249 629-915 19-268 (296)
251 cd05046 PTK_CCK4 Pseudokinase 100.0 7E-34 1.5E-38 306.6 21.6 257 629-919 5-275 (275)
252 cd08220 STKc_Nek8 Catalytic do 100.0 3.1E-34 6.6E-39 305.9 18.5 251 630-916 1-253 (256)
253 cd06605 PKc_MAPKK Catalytic do 100.0 3.1E-34 6.8E-39 307.6 18.6 253 630-916 2-257 (265)
254 PHA03209 serine/threonine kina 100.0 4.6E-34 1E-38 319.1 20.6 191 629-850 66-257 (357)
255 smart00219 TyrKc Tyrosine kina 100.0 5.3E-34 1.2E-38 304.4 19.9 252 631-917 1-258 (258)
256 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 4.9E-34 1.1E-38 307.2 19.7 239 636-918 2-274 (274)
257 cd05627 STKc_NDR2 Catalytic do 100.0 1.8E-34 3.9E-39 323.4 16.8 204 629-851 1-238 (360)
258 cd06610 STKc_OSR1_SPAK Catalyt 100.0 8.8E-34 1.9E-38 304.4 21.5 257 629-916 1-264 (267)
259 cd08528 STKc_Nek10 Catalytic d 100.0 1.4E-33 3E-38 303.3 22.8 263 630-919 1-269 (269)
260 cd05074 PTKc_Tyro3 Catalytic d 100.0 4.2E-34 9.1E-39 308.0 18.7 257 631-920 1-272 (273)
261 cd06643 STKc_SLK Catalytic dom 100.0 8.5E-34 1.8E-38 307.1 21.1 251 630-916 6-262 (282)
262 cd06613 STKc_MAP4K3_like Catal 100.0 1.6E-33 3.5E-38 301.5 23.0 253 629-915 3-259 (262)
263 cd06645 STKc_MAP4K3 Catalytic 100.0 3.7E-34 8.1E-39 307.3 18.1 254 628-916 8-265 (267)
264 cd05586 STKc_Sck1_like Catalyt 100.0 2.5E-34 5.5E-39 318.3 17.2 243 637-915 1-252 (330)
265 cd07878 STKc_p38beta_MAPK11 Ca 100.0 5.1E-34 1.1E-38 317.9 19.6 263 626-916 12-298 (343)
266 cd06644 STKc_STK10_LOK Catalyt 100.0 1.7E-33 3.6E-38 306.4 23.0 252 629-916 12-269 (292)
267 KOG4645 MAPKKK (MAP kinase kin 100.0 1.4E-35 2.9E-40 343.0 6.8 254 629-916 1235-1494(1509)
268 cd07860 STKc_CDK2_3 Catalytic 100.0 5.5E-34 1.2E-38 309.1 19.0 265 630-916 1-281 (284)
269 cd07867 STKc_CDC2L6 Catalytic 100.0 8.2E-34 1.8E-38 312.9 20.5 195 634-851 6-218 (317)
270 cd06651 STKc_MEKK3 Catalytic d 100.0 7.1E-34 1.5E-38 304.9 19.3 254 630-915 3-260 (266)
271 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1E-33 2.2E-38 307.3 20.4 254 629-916 1-262 (286)
272 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 4.3E-34 9.4E-39 305.0 17.3 240 635-918 1-258 (258)
273 cd06624 STKc_ASK Catalytic dom 100.0 8.6E-34 1.9E-38 304.7 19.7 253 629-916 8-265 (268)
274 cd07839 STKc_CDK5 Catalytic do 100.0 6.8E-34 1.5E-38 308.3 18.9 264 630-916 1-281 (284)
275 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.1E-33 2.3E-38 307.2 20.2 265 629-916 1-283 (286)
276 cd06629 STKc_MAPKKK_Bck1_like 100.0 1.6E-33 3.5E-38 303.3 21.4 265 630-916 2-269 (272)
277 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 2.3E-33 5.1E-38 299.7 22.3 238 635-918 1-259 (259)
278 cd06632 STKc_MEKK1_plant Catal 100.0 1.9E-33 4.1E-38 300.2 21.3 252 630-915 1-254 (258)
279 cd06611 STKc_SLK_like Catalyti 100.0 1.2E-33 2.5E-38 305.8 19.8 252 629-916 5-262 (280)
280 cd06638 STKc_myosinIIIA Cataly 100.0 1.9E-33 4E-38 305.2 21.3 257 625-917 14-284 (286)
281 cd06607 STKc_TAO Catalytic dom 100.0 3E-33 6.5E-38 306.6 22.9 252 627-917 13-268 (307)
282 cd06636 STKc_MAP4K4_6 Catalyti 100.0 8E-34 1.7E-38 307.4 18.0 252 627-915 14-278 (282)
283 KOG0983 Mitogen-activated prot 100.0 1.1E-34 2.4E-39 282.0 9.7 253 629-916 92-349 (391)
284 PTZ00284 protein kinase; Provi 100.0 1.5E-33 3.3E-38 326.3 20.8 257 628-915 128-437 (467)
285 cd07844 STKc_PCTAIRE_like Cata 100.0 1.8E-33 3.9E-38 306.2 20.0 263 629-915 5-287 (291)
286 cd08225 STKc_Nek5 Catalytic do 100.0 1.4E-33 3E-38 301.1 18.5 252 630-916 1-254 (257)
287 cd06917 STKc_NAK1_like Catalyt 100.0 2.1E-33 4.6E-38 303.2 19.9 247 630-915 2-254 (277)
288 KOG0584 Serine/threonine prote 100.0 1.7E-34 3.8E-39 313.2 11.2 248 632-915 43-295 (632)
289 cd06641 STKc_MST3 Catalytic do 100.0 2.1E-33 4.6E-38 303.1 19.8 249 629-916 4-253 (277)
290 cd05574 STKc_phototropin_like 100.0 3.1E-33 6.8E-38 308.0 21.4 255 630-915 2-288 (316)
291 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 5.9E-33 1.3E-37 301.2 23.1 260 630-916 2-266 (287)
292 cd06617 PKc_MKK3_6 Catalytic d 100.0 2.4E-33 5.2E-38 303.8 19.9 251 629-915 1-260 (283)
293 cd06652 STKc_MEKK2 Catalytic d 100.0 1.9E-33 4.2E-38 301.4 18.9 256 629-916 2-261 (265)
294 cd06608 STKc_myosinIII_like Ca 100.0 3.4E-33 7.4E-38 301.3 20.8 252 628-915 5-271 (275)
295 cd08217 STKc_Nek2 Catalytic do 100.0 2E-33 4.4E-38 301.2 18.8 255 630-916 1-262 (265)
296 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.1E-33 2.4E-38 307.0 16.7 265 629-916 1-283 (286)
297 cd07832 STKc_CCRK Catalytic do 100.0 3E-33 6.6E-38 303.6 20.1 264 630-916 1-282 (286)
298 cd06658 STKc_PAK5 Catalytic do 100.0 1.6E-33 3.5E-38 306.1 17.8 250 629-916 22-272 (292)
299 cd05577 STKc_GRK Catalytic dom 100.0 1.6E-33 3.4E-38 304.1 17.5 247 637-915 1-253 (277)
300 KOG0579 Ste20-like serine/thre 100.0 6.5E-35 1.4E-39 311.8 6.5 252 629-916 32-289 (1187)
301 cd07835 STKc_CDK1_like Catalyt 100.0 2.4E-33 5.2E-38 303.9 18.9 264 631-916 1-280 (283)
302 KOG1035 eIF-2alpha kinase GCN2 100.0 3E-34 6.5E-39 330.6 12.2 255 627-915 477-870 (1351)
303 cd06639 STKc_myosinIIIB Cataly 100.0 6.1E-33 1.3E-37 301.9 21.9 254 627-916 20-287 (291)
304 cd07870 STKc_PFTAIRE2 Catalyti 100.0 4.3E-33 9.3E-38 303.1 20.6 265 628-915 4-287 (291)
305 cd05609 STKc_MAST Catalytic do 100.0 3.9E-33 8.4E-38 305.5 20.2 258 630-919 2-273 (305)
306 cd06659 STKc_PAK6 Catalytic do 100.0 3.4E-33 7.4E-38 304.3 19.2 249 630-916 22-271 (297)
307 cd05580 STKc_PKA Catalytic dom 100.0 5.5E-33 1.2E-37 302.0 20.7 246 630-915 2-253 (290)
308 KOG4250 TANK binding protein k 100.0 1.2E-33 2.7E-38 310.3 15.4 276 630-928 14-318 (732)
309 cd06630 STKc_MEKK1 Catalytic d 100.0 6.2E-33 1.4E-37 298.0 20.7 259 630-915 1-263 (268)
310 cd07841 STKc_CDK7 Catalytic do 100.0 6.7E-33 1.5E-37 302.7 21.3 266 630-916 1-282 (298)
311 cd06647 STKc_PAK_I Catalytic d 100.0 4.8E-33 1E-37 302.6 19.7 251 628-916 18-269 (293)
312 cd06616 PKc_MKK4 Catalytic dom 100.0 3.7E-33 7.9E-38 303.2 18.8 255 629-916 4-267 (288)
313 PHA03210 serine/threonine kina 100.0 2.1E-33 4.5E-38 326.1 17.9 287 625-916 144-454 (501)
314 cd07836 STKc_Pho85 Catalytic d 100.0 6.5E-33 1.4E-37 300.6 20.6 262 630-915 1-280 (284)
315 cd06623 PKc_MAPKK_plant_like C 100.0 5.2E-33 1.1E-37 297.9 19.4 252 630-916 2-256 (264)
316 cd07831 STKc_MOK Catalytic dom 100.0 1.1E-32 2.4E-37 298.5 21.7 259 631-916 1-279 (282)
317 cd06626 STKc_MEKK4 Catalytic d 100.0 5.2E-33 1.1E-37 297.9 18.9 254 630-915 1-260 (264)
318 cd07833 STKc_CDKL Catalytic do 100.0 3.8E-33 8.2E-38 303.2 18.0 264 630-915 2-284 (288)
319 cd07843 STKc_CDC2L1 Catalytic 100.0 8.8E-33 1.9E-37 301.0 20.9 265 628-916 4-290 (293)
320 cd06648 STKc_PAK_II Catalytic 100.0 1.3E-32 2.9E-37 297.9 21.9 249 630-916 20-269 (285)
321 cd06606 STKc_MAPKKK Catalytic 100.0 1.6E-32 3.5E-37 293.1 22.1 254 630-916 1-257 (260)
322 KOG0604 MAP kinase-activated p 100.0 7.2E-34 1.6E-38 280.1 10.6 259 622-916 54-322 (400)
323 cd06635 STKc_TAO1 Catalytic do 100.0 2.1E-32 4.5E-37 301.2 23.4 257 629-924 25-285 (317)
324 KOG0986 G protein-coupled rece 100.0 6.5E-34 1.4E-38 295.1 10.6 248 629-910 185-435 (591)
325 cd07838 STKc_CDK4_6_like Catal 100.0 1.7E-32 3.8E-37 297.8 22.3 262 631-915 1-283 (287)
326 cd07852 STKc_MAPK15 Catalytic 100.0 1.1E-32 2.4E-37 306.4 20.7 268 626-916 4-295 (337)
327 PLN00009 cyclin-dependent kina 100.0 8.7E-33 1.9E-37 301.2 19.1 265 629-915 2-283 (294)
328 cd07842 STKc_CDK8_like Catalyt 100.0 1.4E-32 2.9E-37 303.1 20.6 269 630-916 1-313 (316)
329 cd05572 STKc_cGK_PKG Catalytic 100.0 1.9E-32 4.2E-37 293.1 21.1 245 637-915 1-251 (262)
330 cd05633 STKc_GRK3 Catalytic do 100.0 1.9E-32 4E-37 295.7 21.1 245 636-916 1-255 (279)
331 KOG0200 Fibroblast/platelet-de 100.0 8.3E-33 1.8E-37 325.4 19.6 259 629-920 296-579 (609)
332 cd06614 STKc_PAK Catalytic dom 100.0 2.4E-32 5.1E-37 296.5 21.7 256 626-918 16-272 (286)
333 cd07837 STKc_CdkB_plant Cataly 100.0 2.1E-32 4.5E-37 298.4 21.1 266 629-916 1-291 (295)
334 PHA03390 pk1 serine/threonine- 100.0 3.4E-32 7.3E-37 291.7 22.3 244 627-915 12-261 (267)
335 cd07845 STKc_CDK10 Catalytic d 100.0 2.2E-32 4.7E-37 300.2 21.1 265 628-916 6-290 (309)
336 PHA02882 putative serine/threo 100.0 2E-32 4.3E-37 297.8 20.5 270 629-918 12-294 (294)
337 cd05578 STKc_Yank1 Catalytic d 100.0 7.7E-33 1.7E-37 295.5 17.0 250 630-914 1-253 (258)
338 cd08226 PK_STRAD_beta Pseudoki 100.0 3.3E-32 7.2E-37 301.1 22.3 262 635-915 4-307 (328)
339 cd07830 STKc_MAK_like Catalyti 100.0 1.8E-32 3.9E-37 297.0 19.6 262 631-916 1-280 (283)
340 cd07849 STKc_ERK1_2_like Catal 100.0 7E-33 1.5E-37 307.6 16.6 269 628-921 4-299 (336)
341 cd05122 PKc_STE Catalytic doma 100.0 2.1E-32 4.6E-37 290.8 19.6 249 631-916 2-251 (253)
342 cd08215 STKc_Nek Catalytic dom 100.0 1.5E-32 3.2E-37 293.2 18.2 252 630-916 1-255 (258)
343 KOG0666 Cyclin C-dependent kin 100.0 2.6E-33 5.6E-38 277.3 10.8 207 626-851 21-242 (438)
344 cd08216 PK_STRAD Pseudokinase 100.0 4.3E-32 9.3E-37 298.8 21.6 263 634-916 7-295 (314)
345 cd08530 STKc_CNK2-like Catalyt 100.0 1.2E-32 2.6E-37 293.6 16.7 250 630-916 1-253 (256)
346 cd07850 STKc_JNK Catalytic dom 100.0 2.1E-32 4.5E-37 305.9 19.3 265 626-916 13-311 (353)
347 cd07865 STKc_CDK9 Catalytic do 100.0 5.2E-32 1.1E-36 297.6 22.2 269 626-916 9-307 (310)
348 cd07864 STKc_CDK12 Catalytic d 100.0 4.1E-32 9E-37 297.2 20.8 268 626-916 4-299 (302)
349 cd06618 PKc_MKK7 Catalytic dom 100.0 2.1E-32 4.6E-37 298.3 18.4 254 628-916 14-273 (296)
350 cd05579 STKc_MAST_like Catalyt 100.0 2.8E-32 6E-37 292.3 18.6 249 637-918 1-256 (265)
351 cd06627 STKc_Cdc7_like Catalyt 100.0 3.6E-32 7.9E-37 289.5 18.5 249 630-915 1-250 (254)
352 cd06657 STKc_PAK4 Catalytic do 100.0 4.9E-32 1.1E-36 294.3 19.9 245 634-916 25-270 (292)
353 cd05118 STKc_CMGC Catalytic do 100.0 5.6E-32 1.2E-36 293.2 20.1 262 631-916 1-280 (283)
354 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.2E-31 2.6E-36 287.3 22.0 255 629-915 2-260 (264)
355 cd07840 STKc_CDK9_like Catalyt 100.0 1.1E-31 2.4E-36 291.5 21.6 263 631-916 1-284 (287)
356 cd05606 STKc_beta_ARK Catalyti 100.0 1.5E-31 3.2E-36 288.7 22.1 245 636-916 1-255 (278)
357 cd06633 STKc_TAO3 Catalytic do 100.0 1.6E-31 3.5E-36 293.4 22.7 249 629-916 21-273 (313)
358 cd07858 STKc_TEY_MAPK_plant Ca 100.0 3.5E-32 7.6E-37 302.0 17.5 268 628-920 4-297 (337)
359 cd07855 STKc_ERK5 Catalytic do 100.0 3.7E-32 7.9E-37 301.6 17.5 266 628-916 4-294 (334)
360 KOG1024 Receptor-like protein 100.0 1E-32 2.2E-37 280.8 11.8 259 629-921 284-556 (563)
361 cd06634 STKc_TAO2 Catalytic do 100.0 1.6E-31 3.4E-36 293.0 22.2 257 629-924 15-275 (308)
362 KOG0586 Serine/threonine prote 100.0 1.7E-32 3.7E-37 297.6 14.4 253 627-918 54-308 (596)
363 cd05611 STKc_Rim15_like Cataly 100.0 9.1E-32 2E-36 287.6 19.9 246 635-917 2-249 (260)
364 cd07866 STKc_BUR1 Catalytic do 100.0 4.6E-32 1E-36 298.2 17.8 266 628-915 7-307 (311)
365 cd05583 STKc_MSK_N N-terminal 100.0 9.5E-32 2.1E-36 292.1 19.5 258 631-919 2-266 (288)
366 cd05613 STKc_MSK1_N N-terminal 100.0 1.8E-31 4E-36 290.1 21.6 255 630-915 1-267 (290)
367 KOG0690 Serine/threonine prote 100.0 4.1E-33 8.9E-38 276.9 7.6 244 628-908 167-411 (516)
368 KOG1006 Mitogen-activated prot 100.0 3.7E-34 8E-39 277.6 -0.3 251 631-915 66-326 (361)
369 cd08222 STKc_Nek11 Catalytic d 100.0 8.6E-32 1.9E-36 287.8 17.9 254 630-916 1-257 (260)
370 cd05581 STKc_PDK1 Catalytic do 100.0 7.4E-32 1.6E-36 291.7 17.2 251 630-915 2-276 (280)
371 cd07834 STKc_MAPK Catalytic do 100.0 1.3E-31 2.8E-36 297.1 18.9 271 630-923 1-298 (330)
372 cd07879 STKc_p38delta_MAPK13 C 100.0 1.8E-31 4E-36 296.8 19.4 267 628-923 14-306 (342)
373 cd07829 STKc_CDK_like Catalyti 100.0 2.3E-31 5E-36 288.1 19.6 261 631-915 1-278 (282)
374 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.5E-31 3.3E-36 297.4 18.3 261 627-915 13-297 (343)
375 PTZ00024 cyclin-dependent prot 100.0 3.2E-31 7E-36 294.4 20.8 277 628-915 7-312 (335)
376 KOG0612 Rho-associated, coiled 100.0 2.1E-32 4.6E-37 312.7 10.4 255 628-915 74-337 (1317)
377 cd07877 STKc_p38alpha_MAPK14 C 100.0 3.8E-31 8.1E-36 294.5 19.4 263 626-916 14-300 (345)
378 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 4.8E-31 1E-35 291.3 19.4 262 627-916 8-288 (328)
379 KOG4236 Serine/threonine prote 100.0 4E-32 8.6E-37 285.4 10.0 245 634-914 569-817 (888)
380 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.9E-31 4.1E-36 296.7 15.8 263 628-915 4-299 (342)
381 cd07851 STKc_p38 Catalytic dom 100.0 1.5E-31 3.3E-36 297.5 15.1 262 626-916 12-298 (343)
382 KOG0607 MAP kinase-interacting 100.0 6.7E-32 1.4E-36 268.1 10.1 259 629-915 77-360 (463)
383 cd05123 STKc_AGC Catalytic dom 100.0 1.1E-30 2.3E-35 277.5 20.1 239 637-912 1-240 (250)
384 cd05610 STKc_MASTL Catalytic d 100.0 6.7E-31 1.4E-35 314.4 20.6 149 628-795 3-152 (669)
385 cd07857 STKc_MPK1 Catalytic do 100.0 8.1E-31 1.7E-35 290.6 19.7 263 630-915 1-291 (332)
386 KOG0587 Traf2- and Nck-interac 100.0 5.1E-31 1.1E-35 295.0 17.8 251 628-915 18-281 (953)
387 KOG0603 Ribosomal protein S6 k 100.0 1.8E-31 3.8E-36 291.4 12.4 240 628-916 321-563 (612)
388 KOG0662 Cyclin-dependent kinas 100.0 7.3E-31 1.6E-35 239.6 13.0 265 630-916 3-283 (292)
389 cd05576 STKc_RPK118_like Catal 100.0 1.4E-30 3E-35 273.9 16.8 220 640-911 4-224 (237)
390 KOG0671 LAMMER dual specificit 100.0 3.2E-31 7E-36 271.2 10.1 263 625-916 85-406 (415)
391 KOG0696 Serine/threonine prote 100.0 7E-31 1.5E-35 268.6 11.2 243 629-908 349-593 (683)
392 KOG1151 Tousled-like protein k 100.0 4.1E-31 8.8E-36 272.4 9.3 267 625-914 459-739 (775)
393 KOG1027 Serine/threonine prote 100.0 6.7E-31 1.5E-35 292.7 7.1 244 632-915 512-766 (903)
394 KOG0614 cGMP-dependent protein 100.0 8E-31 1.7E-35 275.1 6.8 252 629-916 420-677 (732)
395 KOG0695 Serine/threonine prote 100.0 5.1E-30 1.1E-34 255.6 12.2 249 629-908 250-502 (593)
396 KOG0984 Mitogen-activated prot 100.0 4.8E-30 1E-34 240.2 9.5 200 629-850 46-253 (282)
397 PLN03225 Serine/threonine-prot 100.0 2E-29 4.4E-34 293.7 17.0 258 628-916 131-450 (566)
398 KOG0669 Cyclin T-dependent kin 100.0 2.5E-31 5.5E-36 255.6 0.7 269 629-917 17-316 (376)
399 PLN03224 probable serine/threo 100.0 5.9E-29 1.3E-33 281.7 18.9 272 628-916 144-500 (507)
400 smart00220 S_TKc Serine/Threon 100.0 5.8E-29 1.3E-33 262.5 16.4 239 641-915 1-240 (244)
401 KOG0668 Casein kinase II, alph 100.0 2.5E-29 5.5E-34 238.6 9.4 258 628-916 37-322 (338)
402 KOG1290 Serine/threonine prote 100.0 1.2E-27 2.7E-32 251.1 17.8 262 629-916 78-550 (590)
403 KOG0608 Warts/lats-like serine 100.0 2.7E-28 5.8E-33 261.9 11.4 205 629-852 629-874 (1034)
404 KOG0664 Nemo-like MAPK-related 99.9 2.5E-29 5.4E-34 244.3 1.5 266 630-919 54-346 (449)
405 KOG1345 Serine/threonine kinas 99.9 1.6E-27 3.5E-32 232.2 10.1 260 622-918 17-286 (378)
406 KOG1152 Signal transduction se 99.9 2.4E-27 5.2E-32 253.1 9.9 201 629-850 561-770 (772)
407 cd00180 PKc Catalytic domain o 99.9 8.2E-26 1.8E-30 232.8 20.7 212 637-917 1-215 (215)
408 KOG0665 Jun-N-terminal kinase 99.9 1.7E-26 3.8E-31 231.0 11.0 258 628-916 16-310 (369)
409 KOG1167 Serine/threonine prote 99.9 2E-26 4.2E-31 239.8 10.4 265 625-916 32-381 (418)
410 KOG0576 Mitogen-activated prot 99.9 6.7E-27 1.5E-31 253.9 4.7 253 628-915 14-270 (829)
411 smart00221 STYKc Protein kinas 99.9 6.1E-25 1.3E-29 229.0 18.3 199 631-850 1-201 (225)
412 KOG0670 U4/U6-associated splic 99.9 2.9E-26 6.2E-31 241.7 6.0 201 625-851 428-637 (752)
413 PLN03210 Resistant to P. syrin 99.9 1.8E-24 4E-29 273.7 22.9 340 174-527 550-904 (1153)
414 KOG4237 Extracellular matrix p 99.9 1.4E-26 3.1E-31 237.1 -1.3 275 62-338 68-359 (498)
415 PLN03210 Resistant to P. syrin 99.9 2.6E-23 5.6E-28 263.2 22.8 336 154-504 554-904 (1153)
416 PLN00181 protein SPA1-RELATED; 99.9 9.5E-25 2.1E-29 268.5 9.1 197 698-916 28-265 (793)
417 PRK15387 E3 ubiquitin-protein 99.9 1.2E-23 2.7E-28 246.1 15.4 123 374-513 343-465 (788)
418 KOG4237 Extracellular matrix p 99.9 6.1E-26 1.3E-30 232.5 -3.5 276 159-434 68-359 (498)
419 PRK15387 E3 ubiquitin-protein 99.9 2.3E-23 4.9E-28 243.9 16.3 266 159-491 202-467 (788)
420 smart00750 KIND kinase non-cat 99.9 3.7E-23 8E-28 206.7 15.6 167 727-920 1-169 (176)
421 KOG0195 Integrin-linked kinase 99.9 1.9E-24 4.2E-29 210.3 5.2 253 630-920 191-446 (448)
422 PRK15370 E3 ubiquitin-protein 99.9 1.1E-22 2.3E-27 240.2 14.1 207 85-319 178-384 (754)
423 PRK09188 serine/threonine prot 99.9 2.4E-22 5.2E-27 218.4 13.7 172 625-824 14-195 (365)
424 KOG1164 Casein kinase (serine/ 99.9 7.2E-21 1.6E-25 208.6 20.1 261 630-922 19-299 (322)
425 KOG1165 Casein kinase (serine/ 99.9 9.1E-21 2E-25 190.5 17.0 200 629-852 28-239 (449)
426 PRK15370 E3 ubiquitin-protein 99.8 4.9E-21 1.1E-25 226.2 13.2 267 183-507 200-471 (754)
427 KOG0590 Checkpoint kinase and 99.8 1.7E-21 3.6E-26 226.2 5.7 269 632-924 321-595 (601)
428 COG0515 SPS1 Serine/threonine 99.8 2.8E-19 6E-24 198.7 23.5 262 631-916 2-275 (384)
429 KOG1163 Casein kinase (serine/ 99.8 9.4E-21 2E-25 182.1 9.8 202 627-852 13-224 (341)
430 PRK10359 lipopolysaccharide co 99.8 2.4E-20 5.2E-25 187.9 9.2 183 624-843 26-216 (232)
431 cd05147 RIO1_euk RIO kinase fa 99.8 2E-19 4.4E-24 180.0 12.3 156 634-797 2-167 (190)
432 KOG1023 Natriuretic peptide re 99.8 2.3E-19 4.9E-24 198.0 12.8 219 696-924 1-228 (484)
433 cd05145 RIO1_like RIO kinase f 99.8 9.1E-19 2E-23 176.4 14.0 157 634-799 2-169 (190)
434 PRK12274 serine/threonine prot 99.8 1.2E-18 2.6E-23 171.3 13.6 191 632-852 5-210 (218)
435 KOG4158 BRPK/PTEN-induced prot 99.8 6E-19 1.3E-23 181.3 11.4 204 700-924 274-518 (598)
436 KOG0617 Ras suppressor protein 99.8 5.5E-21 1.2E-25 174.1 -3.7 179 45-229 17-195 (264)
437 KOG1240 Protein kinase contain 99.8 2.6E-19 5.7E-24 205.4 5.6 252 630-919 24-294 (1431)
438 KOG0603 Ribosomal protein S6 k 99.8 2.8E-19 6.1E-24 196.3 4.9 235 637-919 2-242 (612)
439 KOG0617 Ras suppressor protein 99.8 4E-20 8.6E-25 168.6 -1.8 179 369-552 29-213 (264)
440 PF14531 Kinase-like: Kinase-l 99.7 3.9E-18 8.5E-23 177.1 11.3 235 630-907 13-288 (288)
441 cd00116 LRR_RI Leucine-rich re 99.7 2.6E-20 5.7E-25 205.5 -7.8 60 397-456 250-318 (319)
442 KOG1166 Mitotic checkpoint ser 99.7 3.2E-17 6.8E-22 193.4 14.5 194 629-847 698-901 (974)
443 cd00116 LRR_RI Leucine-rich re 99.7 1.1E-19 2.4E-24 200.5 -6.0 279 89-408 2-318 (319)
444 PRK10345 hypothetical protein; 99.7 5.8E-17 1.3E-21 163.5 13.6 136 632-794 5-157 (210)
445 smart00090 RIO RIO-like kinase 99.7 1.4E-16 3E-21 165.2 11.9 157 631-797 30-198 (237)
446 cd05144 RIO2_C RIO kinase fami 99.7 2.5E-16 5.5E-21 160.1 11.8 153 631-798 17-176 (198)
447 PRK14879 serine/threonine prot 99.7 4.6E-16 9.9E-21 160.3 13.4 142 635-796 2-143 (211)
448 PRK09605 bifunctional UGMP fam 99.7 8.5E-16 1.8E-20 180.2 15.5 145 628-796 332-476 (535)
449 TIGR03724 arch_bud32 Kae1-asso 99.6 6.8E-16 1.5E-20 157.4 12.2 138 636-796 1-138 (199)
450 KOG1033 eIF-2alpha kinase PEK/ 99.6 5E-17 1.1E-21 175.4 3.2 174 716-914 330-510 (516)
451 KOG0606 Microtubule-associated 99.6 6E-16 1.3E-20 178.3 7.4 208 629-908 83-304 (1205)
452 cd05119 RIO RIO kinase family, 99.6 1.7E-14 3.7E-19 145.5 12.5 153 634-798 2-165 (187)
453 cd05120 APH_ChoK_like Aminogly 99.5 8.4E-14 1.8E-18 135.1 13.3 135 633-796 2-138 (155)
454 KOG0532 Leucine-rich repeat (L 99.5 7.5E-16 1.6E-20 165.9 -3.3 189 130-328 72-260 (722)
455 PRK01723 3-deoxy-D-manno-octul 99.5 2.1E-13 4.6E-18 141.8 14.3 149 634-797 36-192 (239)
456 PLN03150 hypothetical protein; 99.5 4.7E-14 1E-18 167.0 7.5 116 447-564 420-539 (623)
457 KOG0590 Checkpoint kinase and 99.5 8.5E-15 1.8E-19 170.4 0.7 258 629-915 20-285 (601)
458 COG4886 Leucine-rich repeat (L 99.5 6.5E-14 1.4E-18 159.0 7.9 180 131-318 114-294 (394)
459 TIGR01982 UbiB 2-polyprenylphe 99.4 3.5E-13 7.5E-18 152.5 12.1 159 634-799 122-309 (437)
460 KOG0532 Leucine-rich repeat (L 99.4 1.1E-14 2.5E-19 157.0 -2.0 179 340-527 89-271 (722)
461 COG4886 Leucine-rich repeat (L 99.4 2.3E-13 5E-18 154.5 7.7 196 234-461 97-293 (394)
462 PRK04750 ubiB putative ubiquin 99.4 2.5E-12 5.3E-17 146.7 11.6 168 625-800 116-317 (537)
463 PLN03150 hypothetical protein; 99.4 1E-12 2.2E-17 155.7 8.6 126 16-144 390-526 (623)
464 KOG3207 Beta-tubulin folding c 99.3 1.5E-13 3.2E-18 144.3 -0.3 226 65-290 97-339 (505)
465 KOG1259 Nischarin, modulator o 99.3 4.9E-13 1.1E-17 133.2 1.0 207 76-290 205-412 (490)
466 KOG0531 Protein phosphatase 1, 99.2 9.2E-13 2E-17 149.6 -0.5 243 59-315 70-319 (414)
467 KOG0601 Cyclin-dependent kinas 99.2 1.5E-11 3.2E-16 136.4 8.4 251 629-915 114-378 (524)
468 KOG1909 Ran GTPase-activating 99.2 4.7E-13 1E-17 137.1 -3.2 242 56-314 25-311 (382)
469 KOG1266 Protein kinase [Signal 99.2 1.7E-11 3.8E-16 124.2 7.4 211 689-918 114-333 (458)
470 cd05151 ChoK Choline Kinase (C 99.2 6.8E-11 1.5E-15 117.1 10.9 127 634-795 3-135 (170)
471 cd05146 RIO3_euk RIO kinase fa 99.2 2E-10 4.3E-15 113.7 13.7 153 635-798 3-175 (197)
472 KOG1259 Nischarin, modulator o 99.2 3.7E-12 8.1E-17 127.0 1.4 203 55-267 208-413 (490)
473 KOG0531 Protein phosphatase 1, 99.2 2.4E-12 5.2E-17 146.2 -0.1 271 61-367 49-323 (414)
474 KOG3207 Beta-tubulin folding c 99.2 3.8E-12 8.3E-17 133.8 -1.0 212 104-315 117-340 (505)
475 PF14580 LRR_9: Leucine-rich r 99.2 1.6E-11 3.5E-16 119.0 3.2 58 84-145 18-76 (175)
476 PF14580 LRR_9: Leucine-rich r 99.1 2.3E-11 4.9E-16 117.9 3.6 83 181-266 41-126 (175)
477 KOG1243 Protein kinase [Genera 99.1 1.2E-09 2.7E-14 122.1 14.3 167 650-846 34-200 (690)
478 KOG0601 Cyclin-dependent kinas 99.1 1E-10 2.2E-15 129.8 5.6 249 628-920 264-518 (524)
479 KOG1909 Ran GTPase-activating 99.0 2.2E-11 4.8E-16 124.9 -1.3 233 36-289 30-310 (382)
480 cd05154 ACAD10_11_like Acyl-Co 99.0 3.9E-09 8.4E-14 109.6 13.0 142 635-795 4-205 (223)
481 COG3642 Mn2+-dependent serine/ 99.0 5.4E-09 1.2E-13 99.2 12.0 139 635-796 2-140 (204)
482 KOG4658 Apoptotic ATPase [Sign 98.9 4E-10 8.6E-15 136.3 4.3 87 154-241 567-653 (889)
483 KOG3087 Serine/threonine prote 98.9 1.1E-08 2.4E-13 96.4 12.4 151 633-796 11-165 (229)
484 KOG0606 Microtubule-associated 98.9 4.2E-10 9.2E-15 130.9 2.2 252 628-911 803-1084(1205)
485 PF01163 RIO1: RIO1 family; I 98.9 6.8E-09 1.5E-13 102.5 9.7 143 644-798 1-157 (188)
486 KOG4658 Apoptotic ATPase [Sign 98.9 1.6E-09 3.5E-14 131.1 5.1 129 158-288 523-653 (889)
487 PF13855 LRR_8: Leucine rich r 98.8 3.3E-09 7.2E-14 84.5 3.4 60 446-505 2-61 (61)
488 COG0661 AarF Predicted unusual 98.8 1.4E-08 3.1E-13 115.3 9.1 158 635-799 131-317 (517)
489 PRK15123 lipopolysaccharide co 98.8 1.2E-07 2.6E-12 99.7 14.4 152 635-796 28-194 (268)
490 PF13855 LRR_8: Leucine rich r 98.7 7.5E-09 1.6E-13 82.4 3.9 59 183-241 2-60 (61)
491 COG0478 RIO-like serine/threon 98.7 6.4E-08 1.4E-12 97.6 11.3 152 631-796 93-251 (304)
492 KOG1859 Leucine-rich repeat pr 98.7 2E-10 4.4E-15 127.6 -7.4 175 78-266 102-292 (1096)
493 KOG3741 Poly(A) ribonuclease s 98.7 3.8E-07 8.2E-12 99.1 15.7 169 641-848 288-475 (655)
494 KOG2982 Uncharacterized conser 98.7 7.2E-09 1.6E-13 104.0 1.7 205 60-266 44-262 (418)
495 COG4248 Uncharacterized protei 98.5 7.8E-07 1.7E-11 94.1 12.8 257 632-920 14-300 (637)
496 KOG1859 Leucine-rich repeat pr 98.5 3.3E-09 7.2E-14 118.1 -6.3 187 43-244 94-293 (1096)
497 KOG2137 Protein kinase [Signal 98.5 5.3E-08 1.2E-12 109.7 2.4 151 752-915 107-264 (700)
498 PRK09902 hypothetical protein; 98.5 2.8E-06 6.1E-11 84.3 14.2 144 637-796 26-179 (216)
499 KOG1235 Predicted unusual prot 98.4 1.8E-06 3.8E-11 97.9 11.2 158 634-799 166-357 (538)
500 PF06293 Kdo: Lipopolysacchari 98.4 5.7E-06 1.2E-10 84.3 14.1 110 684-798 53-172 (206)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=3.8e-111 Score=1063.49 Aligned_cols=882 Identities=32% Similarity=0.570 Sum_probs=646.7
Q ss_pred CCcccccccCCccccccccCCCCCcccceeeeCCCCceeEeccCCCccccccCcccccCCcccceeeccCccccCcCchh
Q 002250 1 MNLKSKIEKSDTGVFSSWTEANSVCKFNGIVCDSNGLVAEINLPEQQLLGVVPFDSICGLQALQKINLGTNFLYGTITEG 80 (947)
Q Consensus 1 ~~~k~~~~~~~~~~~~sw~~~~~~C~w~gv~c~~~~~v~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~ 80 (947)
+.||.++. ++.+.+++|+.++|||.|.||+|++.++|+.|+|+++++.|.++ .++..+++|+.|+|++|.+.+.+|..
T Consensus 35 ~~~~~~~~-~~~~~~~~w~~~~~~c~w~gv~c~~~~~v~~L~L~~~~i~~~~~-~~~~~l~~L~~L~Ls~n~~~~~ip~~ 112 (968)
T PLN00113 35 LSFKSSIN-DPLKYLSNWNSSADVCLWQGITCNNSSRVVSIDLSGKNISGKIS-SAIFRLPYIQTINLSNNQLSGPIPDD 112 (968)
T ss_pred HHHHHhCC-CCcccCCCCCCCCCCCcCcceecCCCCcEEEEEecCCCccccCC-hHHhCCCCCCEEECCCCccCCcCChH
Confidence 35888884 67788999998899999999999988999999999999999886 68999999999999999999888876
Q ss_pred hh-cCCCccEEeCcCccCcCCCCCcccccccceeecCCCCccCccCcccccccCCCceeeCCCCCCCCCCCChhhccccc
Q 002250 81 LK-SCTRLQVLDLGNNSFSGEVPDLSMLHELSFLNLNSSGISGKFPWKSLENLTNLEFLSLGDNPFDPSPFPMEVLKLEK 159 (947)
Q Consensus 81 l~-~l~~L~~L~Ls~n~i~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~~l~~ 159 (947)
+. .+++|++|+|++|.+++.+|. +.+++|++|+|++|.+.+.+| ..+.++++|++|+|++|.+.. .+|..+.++++
T Consensus 113 ~~~~l~~L~~L~Ls~n~l~~~~p~-~~l~~L~~L~Ls~n~~~~~~p-~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~ 189 (968)
T PLN00113 113 IFTTSSSLRYLNLSNNNFTGSIPR-GSIPNLETLDLSNNMLSGEIP-NDIGSFSSLKVLDLGGNVLVG-KIPNSLTNLTS 189 (968)
T ss_pred HhccCCCCCEEECcCCccccccCc-cccCCCCEEECcCCcccccCC-hHHhcCCCCCEEECccCcccc-cCChhhhhCcC
Confidence 65 888999999988888765553 446666666666666665555 456666666666666666543 23555556666
Q ss_pred CcEEEccCccccccCCccCCCCCCCCEEECcCcccccccCccccCCCCCcEEEeecccccccCCccCCCCCCccEEeccC
Q 002250 160 LYWLYLTNCSVTGQIPEGIGNLTQLQNLELSDNELFGEIPAGIVKLNKLWQLELYNNSLSGRLPVGFSNLTNLMNFDVSQ 239 (947)
Q Consensus 160 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 239 (947)
|++|+|++|.+++.+|..++++++|++|+|++|++++.+|..+.++++|++|+|++|.+++.+|..|+++++|++|+|++
T Consensus 190 L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~ 269 (968)
T PLN00113 190 LEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQ 269 (968)
T ss_pred CCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcC
Confidence 66666666666555555555555666666665555555555555555555555555555555555555555555555555
Q ss_pred CCCCCC-Cccc------------------------cccCCCCEEEccCccCcccCCCCccCCCcCcEEEccCccccccCC
Q 002250 240 NRLEGD-LSEL------------------------RFLNQLSSLHLFENQFSGEIPEEFGEFKHLTELSLYTNRLTGTLP 294 (947)
Q Consensus 240 N~l~~~-~~~l------------------------~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 294 (947)
|++.+. +..+ ..+++|+.|++++|.+.+..|..+..+++|+.|++++|.+++.+|
T Consensus 270 n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p 349 (968)
T PLN00113 270 NKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIP 349 (968)
T ss_pred CeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCC
Confidence 555432 2234 444455555555555555555555555555555555555555555
Q ss_pred cCccCcccccccccccccccCCCCCCcccCCccceeeecccccCCcCCccccCCCCccEEEcccccccccCCCCCCCCCC
Q 002250 295 QKLGSWADFNYVDVSENLLTGPIPPDMCKTGAMTDLLVLQNNFNGTVPETYANCKSLIRFRVNNNSLSGTIPPGIWSLPN 374 (947)
Q Consensus 295 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~ 374 (947)
..++.+++|+.|++++|.+++.+|..++.+..++.|.+.+|++.+.+|..+..+++|+.|++++|.+++..|..+..+++
T Consensus 350 ~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~ 429 (968)
T PLN00113 350 KNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPL 429 (968)
T ss_pred hHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCC
Confidence 55555666666666666666666666666666666666666666777777777788888888888888888888888888
Q ss_pred cceeccccCCcCCCCCCcccccccccEEEccCccccccCCCCCCCCCcceEEEcccCcccCCCCcccccccccchhhccc
Q 002250 375 LSIIDLSTNQFEGPVTDDIGNAKSLALLLLANNRFSGELPSKISEASSLVSIQLSLNQFSGQIPLDIGKLKKLSSLYLHD 454 (947)
Q Consensus 375 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 454 (947)
|+.|++++|++.+.++..+..+++|+.|++++|++.+.+|..+ ..++|+.|++++|++++.+|..+.++++|+.|+|++
T Consensus 430 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 508 (968)
T PLN00113 430 VYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSE 508 (968)
T ss_pred CCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcC
Confidence 8888888888888888778888888888888888887777765 457899999999999999999999999999999999
Q ss_pred cccCCCCCcccccccccceeeccCceeeeecCCCCCccCcCcEEECCCCccCCccCCccc-ccccceeeCCCCcCCCCCC
Q 002250 455 NMFSGPLPYSIGSCVSLTDINFAQNSLSGKIPDSLGSLPSLNSLNLSNNKFSGEIPISLT-YPKLSLLDLSNNQLAGPIP 533 (947)
Q Consensus 455 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~~~L~~L~ls~N~l~~~~p 533 (947)
|++.+.+|..++.+++|+.|+|++|++++.+|..+.++++|+.|+|++|+++|.+|..+. +++|+.|++++|+++|.+|
T Consensus 509 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p 588 (968)
T PLN00113 509 NKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLP 588 (968)
T ss_pred CcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCC
Confidence 999999999999999999999999999999999999999999999999999999998775 5899999999999999999
Q ss_pred Cccc-ccccccccccCCCCCCCCcc-ccCccCCCCCCCcccchhhhHHHHHHHHHHHHHHHHHhhhhhhhccc-ccc--c
Q 002250 534 EPLN-IKAFIDSFTGNPGLCSKTDE-YFKSCSSGSGRSHHVSTFVWCLIAITMVLLVLLASYFVVKLKQNNLK-HSL--K 608 (947)
Q Consensus 534 ~~~~-~~~~~~~~~gN~~~c~~~~~-~~~~~~s~~~~~~~~~~~i~~~i~~~~~~~vl~~~~~~~~~~~~~~~-~~~--~ 608 (947)
+... ..+...++.|||.+|+.... ..+.|..... .....+++++++++++++++++++++++++++..+ ++. .
T Consensus 589 ~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (968)
T PLN00113 589 STGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVRK--TPSWWFYITCTLGAFLVLALVAFGFVFIRGRNNLELKRVENE 666 (968)
T ss_pred CcchhcccChhhhcCCccccCCccccCCCCCccccc--cceeeeehhHHHHHHHHHHHHHHHHHHHHhhhcccccccccc
Confidence 7655 33455689999999986532 2345533211 11111222222222222222222222222222111 111 1
Q ss_pred cCcccccccc---cccccHHHHhhccCCcccccccCceeEEEEEe-CCCcEEEEEEecCCCCCCCCCccchhhhhhcccC
Q 002250 609 QNSWDMKSFR---VLSFSEKEIIDAVKPENLIGKGGSGNVYKVVL-NSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSS 684 (947)
Q Consensus 609 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (947)
...|...... ...+..+++...++..+.||+|+||.||+|+. .+++.||||++...
T Consensus 667 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~-------------------- 726 (968)
T PLN00113 667 DGTWELQFFDSKVSKSITINDILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDV-------------------- 726 (968)
T ss_pred cccccccccccccchhhhHHHHHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCC--------------------
Confidence 1112211110 11123355667788889999999999999996 47899999987311
Q ss_pred ChhhHHHHHHHHhhccccccceEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCC
Q 002250 685 RSSEYDAEVATLSAVRHVNVVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGF 764 (947)
Q Consensus 685 ~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~ 764 (947)
.....+|++++++++|||||+++|+|.+++..|+||||+++|+|.++++. ++|..+.+++.|+|+||+|||+.+
T Consensus 727 -~~~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~-----l~~~~~~~i~~~ia~~L~yLH~~~ 800 (968)
T PLN00113 727 -NSIPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN-----LSWERRRKIAIGIAKALRFLHCRC 800 (968)
T ss_pred -ccccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc-----CCHHHHHHHHHHHHHHHHHhccCC
Confidence 01123568899999999999999999999999999999999999999974 799999999999999999999766
Q ss_pred CCCeEeccCCCCCeEecCCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh
Q 002250 765 DRPVIHRDVKSSNILLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT 844 (947)
Q Consensus 765 ~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt 844 (947)
+++|+||||||+||+++.++.+++. ||.+...... ....+|+.|+|||++.+..++.++|||||||++|||+|
T Consensus 801 ~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~t 873 (968)
T PLN00113 801 SPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD------TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLT 873 (968)
T ss_pred CCCeecCCCCHHhEEECCCCceEEE-eccccccccC------CCccccccccCcccccCCCCCcccchhhHHHHHHHHHh
Confidence 7899999999999999999888875 6655433211 12357899999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcccHHHHHHhhccccccccccccCCC---CccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccC
Q 002250 845 GKRPIVPEFGDSKDIVNWVYSKMDSRDSMLTVVDPNI---SEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAE 921 (947)
Q Consensus 845 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~ 921 (947)
|+.||.........+.+|......... ....+|+.+ .....++..++.+++.+||+.||++||||.||+++|+++.
T Consensus 874 g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~ 952 (968)
T PLN00113 874 GKSPADAEFGVHGSIVEWARYCYSDCH-LDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESAS 952 (968)
T ss_pred CCCCCCcccCCCCcHHHHHHHhcCccc-hhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhh
Confidence 999997766667778887765433222 233445544 2334566778999999999999999999999999999876
Q ss_pred CCC
Q 002250 922 PCS 924 (947)
Q Consensus 922 ~~~ 924 (947)
...
T Consensus 953 ~~~ 955 (968)
T PLN00113 953 RSS 955 (968)
T ss_pred ccc
Confidence 644
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=3.1e-57 Score=572.57 Aligned_cols=491 Identities=33% Similarity=0.514 Sum_probs=420.3
Q ss_pred cccceeeccCccccCcCchhhhcCCCccEEeCcCccCcCCCCC--cccccccceeecCCCCccCccCcccccccCCCcee
Q 002250 61 QALQKINLGTNFLYGTITEGLKSCTRLQVLDLGNNSFSGEVPD--LSMLHELSFLNLNSSGISGKFPWKSLENLTNLEFL 138 (947)
Q Consensus 61 ~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~--l~~l~~L~~L~L~~n~i~~~~~~~~l~~l~~L~~L 138 (947)
.+++.|+|++|.+.+.++..+..+++|+.|+|++|++++..|. +..+++|++|+|++|++++.+| ...+++|++|
T Consensus 69 ~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p---~~~l~~L~~L 145 (968)
T PLN00113 69 SRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIP---RGSIPNLETL 145 (968)
T ss_pred CcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccC---ccccCCCCEE
Confidence 4789999999999999999999999999999999999986664 4599999999999999998877 3568999999
Q ss_pred eCCCCCCCCCCCChhhcccccCcEEEccCccccccCCccCCCCCCCCEEECcCcccccccCccccCCCCCcEEEeecccc
Q 002250 139 SLGDNPFDPSPFPMEVLKLEKLYWLYLTNCSVTGQIPEGIGNLTQLQNLELSDNELFGEIPAGIVKLNKLWQLELYNNSL 218 (947)
Q Consensus 139 ~Ls~n~i~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~l 218 (947)
+|++|.+.. .+|..+..+++|++|+|++|.+.+.+|..++++++|++|+|++|.+.+.+|..+.++++|++|+|++|.+
T Consensus 146 ~Ls~n~~~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l 224 (968)
T PLN00113 146 DLSNNMLSG-EIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNL 224 (968)
T ss_pred ECcCCcccc-cCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCcc
Confidence 999999974 4688899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCccCCCCCCccEEeccCCCCCC-CCccccccCCCCEEEccCccCcccCCCCccCCCcCcEEEccCccccccCCcCc
Q 002250 219 SGRLPVGFSNLTNLMNFDVSQNRLEG-DLSELRFLNQLSSLHLFENQFSGEIPEEFGEFKHLTELSLYTNRLTGTLPQKL 297 (947)
Q Consensus 219 ~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l 297 (947)
++.+|..|.++++|++|+|++|++++ .+..+..+++|+.|+|++|++.+.+|..+..+++|++|+|++|.+++.+|..+
T Consensus 225 ~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~ 304 (968)
T PLN00113 225 SGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELV 304 (968)
T ss_pred CCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhH
Confidence 99999999999999999999999986 45578999999999999999999999999999999999999999999999999
Q ss_pred cCcccccccccccccccCCCCCCcccCCccceeeecccccCCcCCccccCCCCccEEEcccccccccCCCCCCCCCCcce
Q 002250 298 GSWADFNYVDVSENLLTGPIPPDMCKTGAMTDLLVLQNNFNGTVPETYANCKSLIRFRVNNNSLSGTIPPGIWSLPNLSI 377 (947)
Q Consensus 298 ~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 377 (947)
..+++|+.|++++|.+++.+|..+..+++|+.|.+.+|++.+.+|..++.+++|+.|++++|.+++.+|..++.+++|+.
T Consensus 305 ~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~ 384 (968)
T PLN00113 305 IQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFK 384 (968)
T ss_pred cCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCE
Confidence 99999999999999999999999999999999999999999999988888899999999998888877777776666666
Q ss_pred eccccCCcCCCCCCcccccccccEEEccCccccccCCCCCCCCCcceEEEcccCcccCCCCcccc---------------
Q 002250 378 IDLSTNQFEGPVTDDIGNAKSLALLLLANNRFSGELPSKISEASSLVSIQLSLNQFSGQIPLDIG--------------- 442 (947)
Q Consensus 378 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--------------- 442 (947)
|++++|++.+..|..+..+++|+.|++++|++++.+|..+..++.|+.|++++|++++.+|..+.
T Consensus 385 L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~ 464 (968)
T PLN00113 385 LILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKF 464 (968)
T ss_pred EECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCcee
Confidence 66666666666666666666666666666666555555555555555555555555544443322
Q ss_pred --------cccccchhhccccccCCCCCcccccccccceeeccCceeeeecCCCCCccCcCcEEECCCCccCCccCCccc
Q 002250 443 --------KLKKLSSLYLHDNMFSGPLPYSIGSCVSLTDINFAQNSLSGKIPDSLGSLPSLNSLNLSNNKFSGEIPISLT 514 (947)
Q Consensus 443 --------~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 514 (947)
..++|+.|+|++|++++.+|..|..+++|+.|+|++|++++.+|..+.++++|+.|+|++|+++|.+|..+.
T Consensus 465 ~~~~p~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 544 (968)
T PLN00113 465 FGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFS 544 (968)
T ss_pred eeecCcccccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHh
Confidence 245677788888888888888999999999999999999999999999999999999999999999998876
Q ss_pred -ccccceeeCCCCcCCCCCCCcccc--cccccccccCCCCCCCC
Q 002250 515 -YPKLSLLDLSNNQLAGPIPEPLNI--KAFIDSFTGNPGLCSKT 555 (947)
Q Consensus 515 -~~~L~~L~ls~N~l~~~~p~~~~~--~~~~~~~~gN~~~c~~~ 555 (947)
+++|+.|||++|+++|.+|..+.. ......+.+|+..+..+
T Consensus 545 ~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p 588 (968)
T PLN00113 545 EMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLP 588 (968)
T ss_pred CcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCC
Confidence 599999999999999999976642 23344677888766443
No 3
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9e-50 Score=436.52 Aligned_cols=287 Identities=43% Similarity=0.709 Sum_probs=245.1
Q ss_pred ccccccccH-HHHhhccCCcccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCC-hhhHHHHH
Q 002250 616 SFRVLSFSE-KEIIDAVKPENLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSR-SSEYDAEV 693 (947)
Q Consensus 616 ~~~~~~~~~-~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~E~ 693 (947)
....+++.+ +.++++|...+.||+|+||.||+|.+++|+.||||++.... .. ..+|.+|+
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~------------------~~~~~eF~~Ei 122 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNS------------------GQGEREFLNEV 122 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCC------------------CcchhHHHHHH
Confidence 345566666 78889999999999999999999999999999999873211 11 45699999
Q ss_pred HHHhhccccccceEEEEEecCCc-cEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecc
Q 002250 694 ATLSAVRHVNVVKLYCSITSEDS-NLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRD 772 (947)
Q Consensus 694 ~~l~~l~h~niv~l~~~~~~~~~-~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~D 772 (947)
.++.+++|||+|+++|||.+.+. .++|||||++|+|.++++.....+++|..|++||.++|+||+|||+.+.++|||||
T Consensus 123 ~~ls~l~H~Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrD 202 (361)
T KOG1187|consen 123 EILSRLRHPNLVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRD 202 (361)
T ss_pred HHHhcCCCcCcccEEEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCC
Confidence 99999999999999999999995 99999999999999999975433789999999999999999999988888999999
Q ss_pred CCCCCeEecCCCCeEEeccccceecccCCCCcceecc-cccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCC
Q 002250 773 VKSSNILLDLEWKPRIADFGLAKIVQTGEAGDLTHVI-AGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVP 851 (947)
Q Consensus 773 lkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~ 851 (947)
|||+|||+|+++++||+|||+|+..+..... .... .||.+|+|||++..+..+.|+|||||||++.|++||++|.+.
T Consensus 203 iKssNILLD~~~~aKlsDFGLa~~~~~~~~~--~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~ 280 (361)
T KOG1187|consen 203 IKSSNILLDEDFNAKLSDFGLAKLGPEGDTS--VSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQ 280 (361)
T ss_pred CCHHHeeECCCCCEEccCccCcccCCccccc--eeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCC
Confidence 9999999999999999999999765441111 1112 799999999999999999999999999999999999998875
Q ss_pred CC-CCcccHHHHHHhhccccccccccccCCCC--ccCH-HHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCCC
Q 002250 852 EF-GDSKDIVNWVYSKMDSRDSMLTVVDPNIS--EILK-EDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAEPC 923 (947)
Q Consensus 852 ~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~-~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 923 (947)
.. .....+.+|........ .+.+++|+.+. +... +....+..++.+|++.+|.+||+|.||+++|+.+...
T Consensus 281 ~~~~~~~~l~~w~~~~~~~~-~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~ 355 (361)
T KOG1187|consen 281 SRPRGELSLVEWAKPLLEEG-KLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL 355 (361)
T ss_pred CCCcccccHHHHHHHHHHCc-chhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence 54 34455899987777666 56899999984 4443 6888899999999999999999999999999665543
No 4
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=3e-46 Score=382.14 Aligned_cols=254 Identities=28% Similarity=0.424 Sum_probs=215.0
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
.+.+....||+|..|+|||++++ +++.+|+|+++.. ......+++.+|++++++.+||+||++
T Consensus 79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~----------------~~~~~~~Qi~rEl~il~~~~spyIV~~ 142 (364)
T KOG0581|consen 79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLN----------------IDPALQKQILRELEILRSCQSPYIVGF 142 (364)
T ss_pred HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeeccc----------------CCHHHHHHHHHHHHHHhhCCCCCeeeE
Confidence 34556788999999999999976 7889999998321 122345678899999999999999999
Q ss_pred EEEEecCCc-cEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCe
Q 002250 708 YCSITSEDS-NLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKP 786 (947)
Q Consensus 708 ~~~~~~~~~-~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 786 (947)
||.|..++. ..|+||||++|+|.+.++.. ..+++...-+++.+|++||.|||+ +++||||||||+|||++..|++
T Consensus 143 ygaF~~~~~~isI~mEYMDgGSLd~~~k~~--g~i~E~~L~~ia~~VL~GL~YLh~--~~~IIHRDIKPsNlLvNskGeV 218 (364)
T KOG0581|consen 143 YGAFYSNGEEISICMEYMDGGSLDDILKRV--GRIPEPVLGKIARAVLRGLSYLHE--ERKIIHRDIKPSNLLVNSKGEV 218 (364)
T ss_pred eEEEEeCCceEEeehhhcCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhh--ccCeeeccCCHHHeeeccCCCE
Confidence 999999995 99999999999999999975 448888999999999999999995 5899999999999999999999
Q ss_pred EEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 002250 787 RIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSK 866 (947)
Q Consensus 787 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 866 (947)
||||||.++..-.. .....+||..|||||.+.+..|+.++||||||++++|+++|+.||.+......+..+.+...
T Consensus 219 KicDFGVS~~lvnS----~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~I 294 (364)
T KOG0581|consen 219 KICDFGVSGILVNS----IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAI 294 (364)
T ss_pred EeccccccHHhhhh----hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHH
Confidence 99999999876554 23456899999999999999999999999999999999999999977644455555554433
Q ss_pred ccccccccccccCCCCccCHH-HHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 867 MDSRDSMLTVVDPNISEILKE-DALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 867 ~~~~~~~~~~~d~~~~~~~~~-~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
. +...+..+.+ ..+++..++-.|+++||.+||++.|++++
T Consensus 295 v----------~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 295 V----------DEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred h----------cCCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 3 3333444443 67789999999999999999999999864
No 5
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-45 Score=399.07 Aligned_cols=259 Identities=36% Similarity=0.472 Sum_probs=212.3
Q ss_pred ccCCcccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYC 709 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 709 (947)
.....+.+|+|+||+||+|.++....||||++.....+ .....+|.+|+.++++++|||||+++|
T Consensus 42 ~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~---------------~~~~~~f~~E~~il~~l~HpNIV~f~G 106 (362)
T KOG0192|consen 42 ELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFD---------------DESRKAFRREASLLSRLRHPNIVQFYG 106 (362)
T ss_pred HhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcC---------------hHHHHHHHHHHHHHHhCCCCCeeeEEE
Confidence 34455669999999999999994444999998432211 011568999999999999999999999
Q ss_pred EEecCC-ccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCC-eEeccCCCCCeEecCCC-Ce
Q 002250 710 SITSED-SNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRP-VIHRDVKSSNILLDLEW-KP 786 (947)
Q Consensus 710 ~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~-ivH~Dlkp~NIll~~~~-~~ 786 (947)
+|.++. ..++||||+++|+|.++++......+++..++++|.|||+||+||| +.+ ||||||||+|||++.++ ++
T Consensus 107 ~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH---~~~~iIHrDLK~~NiLv~~~~~~~ 183 (362)
T KOG0192|consen 107 ACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLH---SEGPIIHRDLKSDNILVDLKGKTL 183 (362)
T ss_pred EEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh---cCCCeeecccChhhEEEcCCCCEE
Confidence 999987 7899999999999999998865678999999999999999999999 777 99999999999999998 99
Q ss_pred EEeccccceecccCCCCcceecccccccccCccccc--cCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 002250 787 RIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAY--TCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVY 864 (947)
Q Consensus 787 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~ 864 (947)
||+|||+++...... ...+...||+.|||||++. ...|+.|+||||||+++|||+||+.||..... ...+.
T Consensus 184 KI~DFGlsr~~~~~~--~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~-----~~~~~ 256 (362)
T KOG0192|consen 184 KIADFGLSREKVISK--TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP-----VQVAS 256 (362)
T ss_pred EECCCccceeecccc--ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH-----HHHHH
Confidence 999999998765432 2233468999999999999 56899999999999999999999999954321 22222
Q ss_pred hhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCC
Q 002250 865 SKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAEP 922 (947)
Q Consensus 865 ~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 922 (947)
.... ....++++.+++..+..++.+||+.||++||++.+++..|+.+..
T Consensus 257 ~v~~---------~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~ 305 (362)
T KOG0192|consen 257 AVVV---------GGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMS 305 (362)
T ss_pred HHHh---------cCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHH
Confidence 2211 122234445577889999999999999999999999999997543
No 6
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-45 Score=395.57 Aligned_cols=255 Identities=29% Similarity=0.397 Sum_probs=214.4
Q ss_pred ccCCcccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYC 709 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 709 (947)
.++..+.||+|.||+||.|.++....||||.+.+. ....+.|.+|+++|++|+|++||+++|
T Consensus 207 ~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~------------------~m~~~~f~~Ea~iMk~L~H~~lV~l~g 268 (468)
T KOG0197|consen 207 ELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG------------------SMSPEAFLREAQIMKKLRHEKLVKLYG 268 (468)
T ss_pred HHHHHHHhcCCccceEEEEEEcCCCcccceEEecc------------------ccChhHHHHHHHHHHhCcccCeEEEEE
Confidence 45567889999999999999997779999998432 244578889999999999999999999
Q ss_pred EEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEe
Q 002250 710 SITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIA 789 (947)
Q Consensus 710 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 789 (947)
+|..++..|||||||+.|+|.++++..++..+...+.+.++.|||+||+||+ ++++|||||.++||||+++..+||+
T Consensus 269 V~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLe---s~~~IHRDLAARNiLV~~~~~vKIs 345 (468)
T KOG0197|consen 269 VCTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLE---SKNYIHRDLAARNILVDEDLVVKIS 345 (468)
T ss_pred EEecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHH---hCCccchhhhhhheeeccCceEEEc
Confidence 9999999999999999999999999877778999999999999999999999 9999999999999999999999999
Q ss_pred ccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhcc
Q 002250 790 DFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNWVYSKMD 868 (947)
Q Consensus 790 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 868 (947)
|||+|+...++.+.... ...-...|.|||.+..++++.|||||||||++|||+| |+.||... ...+..+.+ +
T Consensus 346 DFGLAr~~~d~~Y~~~~-~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~m--sn~ev~~~l----e 418 (468)
T KOG0197|consen 346 DFGLARLIGDDEYTASE-GGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGM--SNEEVLELL----E 418 (468)
T ss_pred ccccccccCCCceeecC-CCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCC--CHHHHHHHH----h
Confidence 99999955444432222 2234678999999999999999999999999999999 88887422 122222221 1
Q ss_pred ccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccC
Q 002250 869 SRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAE 921 (947)
Q Consensus 869 ~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~ 921 (947)
.+..-+.+..++..+.++|..||+.+|++|||+..+...++++.
T Consensus 419 ---------~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~ 462 (468)
T KOG0197|consen 419 ---------RGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFF 462 (468)
T ss_pred ---------ccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhh
Confidence 12223456678889999999999999999999999998888754
No 7
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-44 Score=366.98 Aligned_cols=200 Identities=31% Similarity=0.462 Sum_probs=177.3
Q ss_pred hhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccce
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVK 706 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 706 (947)
.++|...+.||+|+||+||+|+++ ++..||||.+.... ......+-+..|+++++.++|||||+
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~---------------l~~k~~e~L~~Ei~iLkel~H~nIV~ 73 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKK---------------LNKKLVELLLSEIKILKELKHPNIVR 73 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhc---------------cCHHHHHHHHHHHHHHHhcCCcceee
Confidence 467888888999999999999966 68999999983111 12233456789999999999999999
Q ss_pred EEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCC---
Q 002250 707 LYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLE--- 783 (947)
Q Consensus 707 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~--- 783 (947)
+++++..++..|+|||||+||+|.+++++.+ .+++.....++.|+|.||++|| +++||||||||+|||++..
T Consensus 74 l~d~~~~~~~i~lVMEyC~gGDLs~yi~~~~--~l~e~t~r~Fm~QLA~alq~L~---~~~IiHRDLKPQNiLLs~~~~~ 148 (429)
T KOG0595|consen 74 LLDCIEDDDFIYLVMEYCNGGDLSDYIRRRG--RLPEATARHFMQQLASALQFLH---ENNIIHRDLKPQNILLSTTARN 148 (429)
T ss_pred EEEEEecCCeEEEEEEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCcceEEeccCCCC
Confidence 9999999999999999999999999999854 5899999999999999999999 8999999999999999865
Q ss_pred ---CCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCC
Q 002250 784 ---WKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIV 850 (947)
Q Consensus 784 ---~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~ 850 (947)
..+||+|||+|+...+... ....+|++.|||||+++.++|+.|+|+||+|+++|||++|+.||.
T Consensus 149 ~~~~~LKIADFGfAR~L~~~~~---a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~ 215 (429)
T KOG0595|consen 149 DTSPVLKIADFGFARFLQPGSM---AETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFD 215 (429)
T ss_pred CCCceEEecccchhhhCCchhH---HHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcc
Confidence 5689999999998875543 335689999999999999999999999999999999999999995
No 8
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.2e-43 Score=381.72 Aligned_cols=251 Identities=25% Similarity=0.366 Sum_probs=212.0
Q ss_pred hccCCcccccccCceeEEEEEe-CCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVL-NSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
.+|+..+.||+|+|+.||+++. .+|+.||+|++... ........+...+||+|.+.|+|||||++
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~--------------~l~k~~~reKv~~EIeIHr~L~HpnIV~f 83 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKK--------------LLKKPKQREKVLNEIEIHRSLKHPNIVQF 83 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehH--------------HhcCcchHHHHHHHHHHHHhcCCCcEEee
Confidence 5799999999999999999996 78999999999422 12233455778899999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
+++|++.+.+|||.|+|+.++|..+++. +.++++..+..+..||+.||.||| +.+|+|||||..|++++++.++|
T Consensus 84 ~~~FEDs~nVYivLELC~~~sL~el~Kr--rk~ltEpEary~l~QIv~GlkYLH---~~~IiHRDLKLGNlfL~~~~~VK 158 (592)
T KOG0575|consen 84 YHFFEDSNNVYIVLELCHRGSLMELLKR--RKPLTEPEARYFLRQIVEGLKYLH---SLGIIHRDLKLGNLFLNENMNVK 158 (592)
T ss_pred eeEeecCCceEEEEEecCCccHHHHHHh--cCCCCcHHHHHHHHHHHHHHHHHH---hcCceecccchhheeecCcCcEE
Confidence 9999999999999999999999999984 567899999999999999999999 89999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKM 867 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 867 (947)
|+|||+|..+...+. .....+|||.|+|||++....++..+||||+|||+|-|+.|++||+ ..++-+......
T Consensus 159 IgDFGLAt~le~~~E--rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFe-----tk~vkety~~Ik 231 (592)
T KOG0575|consen 159 IGDFGLATQLEYDGE--RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFE-----TKTVKETYNKIK 231 (592)
T ss_pred ecccceeeeecCccc--ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcc-----cchHHHHHHHHH
Confidence 999999998865432 2235689999999999998889999999999999999999999994 333444333332
Q ss_pred cccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 868 DSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 868 ~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
..... ++.....+..+++.++++.+|.+|||+.+|+..
T Consensus 232 ~~~Y~-----------~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 232 LNEYS-----------MPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred hcCcc-----------cccccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 22222 223444567788889999999999999999953
No 9
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.5e-44 Score=365.94 Aligned_cols=263 Identities=25% Similarity=0.354 Sum_probs=207.6
Q ss_pred HHHhhccCCcccccccCceeEEEEE-eCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccc
Q 002250 625 KEIIDAVKPENLIGKGGSGNVYKVV-LNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVN 703 (947)
Q Consensus 625 ~~~~~~~~~~~~iG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n 703 (947)
+.+.+.|.+.+.+|+|+||.|-+|. .++|+.||||+++........ .........++|+++|++++|||
T Consensus 168 ks~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s----------~~~~~~~~v~~EieILkkL~HP~ 237 (475)
T KOG0615|consen 168 KSFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCS----------RAIAKTRDVQNEIEILKKLSHPN 237 (475)
T ss_pred chhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhccccc----------ccccchhhhHHHHHHHHhcCCCC
Confidence 3456778889999999999999999 458999999999644322110 00112234679999999999999
Q ss_pred cceEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCC
Q 002250 704 VVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLE 783 (947)
Q Consensus 704 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~ 783 (947)
||+++++|..++..||||||++||.|.+++-..+. +.+..-..++.|++.|+.||| ++||+||||||+|||+..+
T Consensus 238 IV~~~d~f~~~ds~YmVlE~v~GGeLfd~vv~nk~--l~ed~~K~~f~Qll~avkYLH---~~GI~HRDiKPeNILl~~~ 312 (475)
T KOG0615|consen 238 IVRIKDFFEVPDSSYMVLEYVEGGELFDKVVANKY--LREDLGKLLFKQLLTAVKYLH---SQGIIHRDIKPENILLSND 312 (475)
T ss_pred EEEEeeeeecCCceEEEEEEecCccHHHHHHhccc--cccchhHHHHHHHHHHHHHHH---HcCcccccCCcceEEeccC
Confidence 99999999999999999999999999999987544 555556779999999999999 9999999999999999866
Q ss_pred ---CCeEEeccccceecccCCCCcceecccccccccCccccccCC---CCCccchHHHHHHHHHHHhCCCCCCCCCCCcc
Q 002250 784 ---WKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCK---INEKSDVYSFGVVLMELVTGKRPIVPEFGDSK 857 (947)
Q Consensus 784 ---~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~ 857 (947)
..+||+|||+|+..+.. ..+...+||+.|.|||++.+.. +..++|+||+||++|-+++|.+||-....+..
T Consensus 313 ~e~~llKItDFGlAK~~g~~---sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~s 389 (475)
T KOG0615|consen 313 AEDCLLKITDFGLAKVSGEG---SFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPS 389 (475)
T ss_pred CcceEEEecccchhhccccc---eehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCcc
Confidence 77999999999987643 3455679999999999997654 33478999999999999999999965443321
Q ss_pred cHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 858 DIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
- .+ ....++.. ..+....+..++..+++.+|+..||++|||+.|++++
T Consensus 390 l-~e---QI~~G~y~-------f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 390 L-KE---QILKGRYA-------FGPLQWDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred H-HH---HHhcCccc-------ccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 1 11 11111111 1134455667788899999999999999999999853
No 10
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.5e-44 Score=349.91 Aligned_cols=259 Identities=24% Similarity=0.356 Sum_probs=210.3
Q ss_pred hhccCCcccccccCceeEEEEE-eCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccce
Q 002250 628 IDAVKPENLIGKGGSGNVYKVV-LNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVK 706 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 706 (947)
...|++.++||+|+||+|||+. ..+|..||.|.++-+. ....+.+....|+.++++|+|||||+
T Consensus 18 l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~---------------md~k~rq~~v~Ei~lLkQL~HpNIVq 82 (375)
T KOG0591|consen 18 LADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGM---------------MDAKARQDCVKEISLLKQLNHPNIVQ 82 (375)
T ss_pred HHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhh---------------ccHHHHHHHHHHHHHHHhcCCchHHH
Confidence 3568889999999999999999 6689999999884222 12244567889999999999999999
Q ss_pred EEE-EEecCCc-cEEEEeccCCCChHHHhhhc--CCccCCHHHHHHHHHHHHHHHHHHhcCCC-CCeEeccCCCCCeEec
Q 002250 707 LYC-SITSEDS-NLLVYEYLPNGSLWDRLHTC--HKIEMDWVVRYAIAVGAAKGLEYLHHGFD-RPVIHRDVKSSNILLD 781 (947)
Q Consensus 707 l~~-~~~~~~~-~~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~~ia~~l~yLH~~~~-~~ivH~Dlkp~NIll~ 781 (947)
+++ .+.++.. .+|||||++.|+|..+++.. ....+++..++++..|++.||.++|..+. .-|+||||||.||+++
T Consensus 83 Yy~~~f~~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~ 162 (375)
T KOG0591|consen 83 YYAHSFIEDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLT 162 (375)
T ss_pred HHHHhhhccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEc
Confidence 998 4555555 78999999999999999754 45679999999999999999999994222 2399999999999999
Q ss_pred CCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHH
Q 002250 782 LEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVN 861 (947)
Q Consensus 782 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~ 861 (947)
.+|.+||+|||++++...... .....+|||.||+||.+.+..|+.||||||+||++|||+.=++||.+. .+.+
T Consensus 163 ~~gvvKLGDfGL~r~l~s~~t--fA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-----n~~~ 235 (375)
T KOG0591|consen 163 ANGVVKLGDFGLGRFLSSKTT--FAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-----NLLS 235 (375)
T ss_pred CCCceeeccchhHhHhcchhH--HHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-----cHHH
Confidence 999999999999998866543 334678999999999999999999999999999999999999999543 4444
Q ss_pred HHHhhccccccccccccCCCCccC-HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 002250 862 WVYSKMDSRDSMLTVVDPNISEIL-KEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLE 918 (947)
Q Consensus 862 ~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~ 918 (947)
......+ ...++.+ ......+..++..|+..||+.||+...+++.++
T Consensus 236 L~~KI~q----------gd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~ 283 (375)
T KOG0591|consen 236 LCKKIEQ----------GDYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQ 283 (375)
T ss_pred HHHHHHc----------CCCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHH
Confidence 3322222 2334455 456678899999999999999998555554444
No 11
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=7.4e-44 Score=400.59 Aligned_cols=262 Identities=24% Similarity=0.378 Sum_probs=221.2
Q ss_pred hccCCcccccccCceeEEEEEeC------CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcccc
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN------SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHV 702 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 702 (947)
.+.+..+.||+|.||+||+|+.. +.+-||||.++.. ...+..++|++|++.++.++||
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~----------------a~~~~~~dF~REaeLla~l~H~ 549 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDK----------------AENQARQDFRREAELLAELQHP 549 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhccc----------------ccHHHHHHHHHHHHHHHhccCC
Confidence 34556788999999999999843 3567999988422 1223568999999999999999
Q ss_pred ccceEEEEEecCCccEEEEeccCCCChHHHhhhcC--------Cc----cCCHHHHHHHHHHHHHHHHHHhcCCCCCeEe
Q 002250 703 NVVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCH--------KI----EMDWVVRYAIAVGAAKGLEYLHHGFDRPVIH 770 (947)
Q Consensus 703 niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~--------~~----~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH 770 (947)
|||+++|+|.+++..++|+|||..|+|.++|.... .. +++..+.+.||.|||.||+||. ++.+||
T Consensus 550 nIVrLlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs---~~~FVH 626 (774)
T KOG1026|consen 550 NIVRLLGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLS---SHHFVH 626 (774)
T ss_pred CeEEEEEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCcccc
Confidence 99999999999999999999999999999997541 12 3888999999999999999999 899999
Q ss_pred ccCCCCCeEecCCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCC
Q 002250 771 RDVKSSNILLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPI 849 (947)
Q Consensus 771 ~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~ 849 (947)
|||..+|+||.++..|||+|||+++.....+++.......-..+|||||.++.++|+.+||||||||++||+++ |+.||
T Consensus 627 RDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy 706 (774)
T KOG1026|consen 627 RDLATRNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPY 706 (774)
T ss_pred cchhhhhceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcc
Confidence 99999999999999999999999998877777655434445789999999999999999999999999999999 99998
Q ss_pred CCCCCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCCCC
Q 002250 850 VPEFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAEPCS 924 (947)
Q Consensus 850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 924 (947)
++. ..++..+. +-++.+-+.++.++.++++||+.||+..|++||+++||-..|+.+....
T Consensus 707 ~gl--Sn~EVIe~-------------i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s 766 (774)
T KOG1026|consen 707 YGL--SNQEVIEC-------------IRAGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQAS 766 (774)
T ss_pred ccc--chHHHHHH-------------HHcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcC
Confidence 543 22222222 2233445678889999999999999999999999999999999876554
No 12
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=2e-42 Score=354.12 Aligned_cols=260 Identities=25% Similarity=0.316 Sum_probs=207.0
Q ss_pred hhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccce
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVK 706 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 706 (947)
.+.|++.+.||+|+||+||+++.+ +++.+|+|++..... ....+.....+|..++.+++||+||+
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~i--------------v~~~e~~~~~~Er~IL~~v~hPFiv~ 89 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKI--------------VEKKEVRHTKAERNILSKIKHPFIVK 89 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHh--------------hhhhhHHHHHHHHHHHHhCCCCcEee
Confidence 478999999999999999999955 689999999943221 11245567889999999999999999
Q ss_pred EEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCe
Q 002250 707 LYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKP 786 (947)
Q Consensus 707 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 786 (947)
++-.|++++..|+|+||+.||.|..++.+.+ .+++....-.+..|+.||.||| +.+||||||||+|||+|.+|.+
T Consensus 90 l~ysFQt~~kLylVld~~~GGeLf~hL~~eg--~F~E~~arfYlaEi~lAL~~LH---~~gIiyRDlKPENILLd~~GHi 164 (357)
T KOG0598|consen 90 LIYSFQTEEKLYLVLDYLNGGELFYHLQREG--RFSEDRARFYLAEIVLALGYLH---SKGIIYRDLKPENILLDEQGHI 164 (357)
T ss_pred eEEecccCCeEEEEEeccCCccHHHHHHhcC--CcchhHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHeeecCCCcE
Confidence 9999999999999999999999999999754 4777777778889999999999 9999999999999999999999
Q ss_pred EEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 002250 787 RIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSK 866 (947)
Q Consensus 787 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 866 (947)
+|+|||+++....... .+..++||+.|||||++.+..|+..+|.||+|+++|||++|.+||. ..+...+....
T Consensus 165 ~LtDFgL~k~~~~~~~--~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~-----~~~~~~~~~~I 237 (357)
T KOG0598|consen 165 KLTDFGLCKEDLKDGD--ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFY-----AEDVKKMYDKI 237 (357)
T ss_pred EEeccccchhcccCCC--ccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCc-----CccHHHHHHHH
Confidence 9999999985443322 2345799999999999999999999999999999999999999995 33444444333
Q ss_pred ccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCCC
Q 002250 867 MDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAEPC 923 (947)
Q Consensus 867 ~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 923 (947)
.... +...+.-...+..+++.+.+..||++|.....=.+.+++..-.
T Consensus 238 ~~~k----------~~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF 284 (357)
T KOG0598|consen 238 LKGK----------LPLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFF 284 (357)
T ss_pred hcCc----------CCCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCccc
Confidence 3332 1111222334567778899999999997432223334444333
No 13
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-40 Score=345.86 Aligned_cols=263 Identities=25% Similarity=0.362 Sum_probs=213.9
Q ss_pred hhccCCcccccccCceeEEEEE-eCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccce
Q 002250 628 IDAVKPENLIGKGGSGNVYKVV-LNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVK 706 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 706 (947)
.+.|+..+.||.|..++||+|+ .+.+..||||++. ..+.......+.+|+..++.++||||++
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~in----------------LEkc~~~ld~l~kE~~~msl~~HPNIv~ 88 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIIN----------------LEKCNNDLDALRKEVQTMSLIDHPNIVT 88 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEee----------------hhhhhhhHHHHHHHHHHhhhcCCCCcce
Confidence 3679999999999999999999 5678999999993 3334455788999999999999999999
Q ss_pred EEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCe
Q 002250 707 LYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKP 786 (947)
Q Consensus 707 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 786 (947)
++..|..+...|+||.||.+|++.+.++......+++..+..|..++++||.||| .+|.||||||+.|||++.+|.|
T Consensus 89 ~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH---~~G~IHRdvKAgnILi~~dG~V 165 (516)
T KOG0582|consen 89 YHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLH---QNGHIHRDVKAGNILIDSDGTV 165 (516)
T ss_pred EEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHH---hcCceecccccccEEEcCCCcE
Confidence 9999999999999999999999999999887778999999999999999999999 8999999999999999999999
Q ss_pred EEeccccceecccCCCCc-ce-ecccccccccCcccccc--CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHH
Q 002250 787 RIADFGLAKIVQTGEAGD-LT-HVIAGTHGYIAPEYAYT--CKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNW 862 (947)
Q Consensus 787 kl~DfG~a~~~~~~~~~~-~~-~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~ 862 (947)
||+|||.+..+....... .. ...+||+.|||||+++. ..|+.|+||||||++..|+.+|..||. ...-...
T Consensus 166 kLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~-----k~pPmkv 240 (516)
T KOG0582|consen 166 KLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFS-----KYPPMKV 240 (516)
T ss_pred EEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcc-----cCChHHH
Confidence 999999887655443211 11 34589999999999643 349999999999999999999999983 2233334
Q ss_pred HHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 863 VYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 863 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
+...+++...... ....-.+........+.+++..|+.+||.+|||+.++++
T Consensus 241 Ll~tLqn~pp~~~-t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 241 LLLTLQNDPPTLL-TSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred HHHHhcCCCCCcc-cccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 4444444332111 000112222334457889999999999999999999985
No 14
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-41 Score=364.41 Aligned_cols=262 Identities=28% Similarity=0.406 Sum_probs=211.7
Q ss_pred hhccCCcccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
.+.+.+.+.||+|+||+||+|++. ..||||++..+. ......+.|+.|+.++++-+|.||+=|
T Consensus 391 ~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~---------------pt~~qlqaFKnEVa~lkkTRH~NIlLF 453 (678)
T KOG0193|consen 391 PEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDD---------------PTPEQLQAFKNEVAVLKKTRHENILLF 453 (678)
T ss_pred HHHhhccceeccccccceeecccc--cceEEEEEecCC---------------CCHHHHHHHHHHHHHHhhcchhhheee
Confidence 356678899999999999999998 469999994322 122356889999999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
.|||..+.. .||+.|++|-+|+.+++..+ ..++..+...||.|||+||.||| .++|||||||..||++.+++.||
T Consensus 454 MG~~~~p~~-AIiTqwCeGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLH---AK~IIHrDLKSnNIFl~~~~kVk 528 (678)
T KOG0193|consen 454 MGACMNPPL-AIITQWCEGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLH---AKNIIHRDLKSNNIFLHEDLKVK 528 (678)
T ss_pred ehhhcCCce-eeeehhccCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhh---hhhhhhhhccccceEEccCCcEE
Confidence 999999877 99999999999999999743 56899999999999999999999 99999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccccC---CCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTC---KINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVY 864 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~ 864 (947)
|+|||++................|...|||||+++.. .|++.+||||||+|+|||+||..||.....+. .++
T Consensus 529 IgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dq-----Iif 603 (678)
T KOG0193|consen 529 IGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQ-----IIF 603 (678)
T ss_pred EecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhh-----eEE
Confidence 9999999755433222222233577899999999754 48899999999999999999999984211110 000
Q ss_pred hhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCC
Q 002250 865 SKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAEP 922 (947)
Q Consensus 865 ~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 922 (947)
...++ -..+.......+++.++.+|+..||.+++++||.+.+++..|+++.+
T Consensus 604 mVGrG------~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 604 MVGRG------YLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred Eeccc------ccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 00000 01123345566778889999999999999999999999999988776
No 15
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=3.1e-45 Score=373.25 Aligned_cols=470 Identities=25% Similarity=0.367 Sum_probs=330.6
Q ss_pred EeccCCCccccccCcccccCCcccceeeccCccccCcCchhhhcCCCccEEeCcCccCcCCCCCcccccccceeecCCCC
Q 002250 40 EINLPEQQLLGVVPFDSICGLQALQKINLGTNFLYGTITEGLKSCTRLQVLDLGNNSFSGEVPDLSMLHELSFLNLNSSG 119 (947)
Q Consensus 40 ~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~l~~l~~L~~L~L~~n~ 119 (947)
.+.++++.+...- +.+..+..|+.|++++|++ ...|.+++++..++.|+.++|+++..++.++.+.+|..|+.++|.
T Consensus 49 ~lils~N~l~~l~--~dl~nL~~l~vl~~~~n~l-~~lp~aig~l~~l~~l~vs~n~ls~lp~~i~s~~~l~~l~~s~n~ 125 (565)
T KOG0472|consen 49 KLILSHNDLEVLR--EDLKNLACLTVLNVHDNKL-SQLPAAIGELEALKSLNVSHNKLSELPEQIGSLISLVKLDCSSNE 125 (565)
T ss_pred hhhhccCchhhcc--HhhhcccceeEEEeccchh-hhCCHHHHHHHHHHHhhcccchHhhccHHHhhhhhhhhhhccccc
Confidence 4556666554333 3577888888888888888 566778888888888888888888777788888888888888888
Q ss_pred ccCccCcccccccCCCceeeCCCCCCCCCCCChhhcccccCcEEEccCccccccCCccCCCCCCCCEEECcCcccccccC
Q 002250 120 ISGKFPWKSLENLTNLEFLSLGDNPFDPSPFPMEVLKLEKLYWLYLTNCSVTGQIPEGIGNLTQLQNLELSDNELFGEIP 199 (947)
Q Consensus 120 i~~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~ 199 (947)
+.... ..++.+..|+.|+..+|++.. .|..+..+.+|..|++.+|+++...|+.+. ++.|++||...|.++ .+|
T Consensus 126 ~~el~--~~i~~~~~l~dl~~~~N~i~s--lp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-tlP 199 (565)
T KOG0472|consen 126 LKELP--DSIGRLLDLEDLDATNNQISS--LPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-TLP 199 (565)
T ss_pred eeecC--chHHHHhhhhhhhcccccccc--CchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-cCC
Confidence 87443 478888888888888888865 677788888888888888888855444444 888888888888885 788
Q ss_pred ccccCCCCCcEEEeecccccccCCccCCCCCCccEEeccCCCCCCCCcc-ccccCCCCEEEccCccCcccCCCCccCCCc
Q 002250 200 AGIVKLNKLWQLELYNNSLSGRLPVGFSNLTNLMNFDVSQNRLEGDLSE-LRFLNQLSSLHLFENQFSGEIPEEFGEFKH 278 (947)
Q Consensus 200 ~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~ 278 (947)
..++.+.+|.-|+|.+|+|. .+| .|.++..|.+|+++.|.|+..+.+ .+.+++|..|||+.|+++ ..|+.++-+.+
T Consensus 200 ~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrs 276 (565)
T KOG0472|consen 200 PELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRS 276 (565)
T ss_pred hhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccc-cCchHHHHhhh
Confidence 88888888888888888888 566 788888888888888888877765 457888888888888888 78888888888
Q ss_pred CcEEEccCccccccCCcCccCcccccccccccccccCCCCCCcccCCc---cceeee------ccccc-----CCcCC-c
Q 002250 279 LTELSLYTNRLTGTLPQKLGSWADFNYVDVSENLLTGPIPPDMCKTGA---MTDLLV------LQNNF-----NGTVP-E 343 (947)
Q Consensus 279 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~---l~~L~l------~~n~~-----~~~~p-~ 343 (947)
|+.||+++|.|+ .+|..++++ .|+.|-+.+|++.. +..++...+. +.+|.- .++.- ....| .
T Consensus 277 L~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrT-iRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~ 353 (565)
T KOG0472|consen 277 LERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRT-IRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSE 353 (565)
T ss_pred hhhhcccCCccc-cCCcccccc-eeeehhhcCCchHH-HHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCC
Confidence 888888888888 778888888 88888888888762 2222111111 000000 00000 00111 1
Q ss_pred c---ccCCCCccEEEcccccccccCCCCCCCCCC---cceeccccCCcCCCCCCcccccccccE-EEccCccccccCCCC
Q 002250 344 T---YANCKSLIRFRVNNNSLSGTIPPGIWSLPN---LSIIDLSTNQFEGPVTDDIGNAKSLAL-LLLANNRFSGELPSK 416 (947)
Q Consensus 344 ~---~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~---L~~L~Ls~N~l~~~~~~~~~~l~~L~~-L~L~~N~l~~~~p~~ 416 (947)
. ...+.+.+.|++++-+++ .+|+..+...+ ....+++.|++.. .|..+..+..+.. +.+++|.+. .+|..
T Consensus 354 ~~~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~e-lPk~L~~lkelvT~l~lsnn~is-fv~~~ 430 (565)
T KOG0472|consen 354 SFPDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLCE-LPKRLVELKELVTDLVLSNNKIS-FVPLE 430 (565)
T ss_pred cccchhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHhh-hhhhhHHHHHHHHHHHhhcCccc-cchHH
Confidence 1 223456677777777777 56665554444 6667777777763 5555555555443 344444443 67777
Q ss_pred CCCCCcceEEEcccCcccCCCCcccccccccchhhccccccCCCCCcccccccccceeeccCceeeeecCCCCCccCcCc
Q 002250 417 ISEASSLVSIQLSLNQFSGQIPLDIGKLKKLSSLYLHDNMFSGPLPYSIGSCVSLTDINFAQNSLSGKIPDSLGSLPSLN 496 (947)
Q Consensus 417 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 496 (947)
++.+++|..|+|++|-+. .+|.+++.+..|+.|++|.|++. .+|..+..+..|+.+-.++|++....|+.+.+|.+|.
T Consensus 431 l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~ 508 (565)
T KOG0472|consen 431 LSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLT 508 (565)
T ss_pred HHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcc
Confidence 777777777777777776 67777777777777777777776 5666666666666665566777655555577777777
Q ss_pred EEECCCCccCCccCCcccccccceeeCCCCcCC
Q 002250 497 SLNLSNNKFSGEIPISLTYPKLSLLDLSNNQLA 529 (947)
Q Consensus 497 ~L~Ls~N~l~~~~p~~~~~~~L~~L~ls~N~l~ 529 (947)
+|||.+|.+...+|..-.+.+|++|++++|++.
T Consensus 509 tLDL~nNdlq~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 509 TLDLQNNDLQQIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred eeccCCCchhhCChhhccccceeEEEecCCccC
Confidence 777777777755555445677777777777776
No 16
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-41 Score=356.43 Aligned_cols=254 Identities=25% Similarity=0.340 Sum_probs=205.9
Q ss_pred hhccCCcccccccCceeEEEEEe-CCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-cccccc
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVL-NSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-RHVNVV 705 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv 705 (947)
..+|.+++.||+|+|++|++|+. ..++.+|||++.. ....++....-..+|-.+|.+| .||.|+
T Consensus 72 ~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K--------------~~Iike~KvkYV~~Ek~~l~~L~~hPgiv 137 (604)
T KOG0592|consen 72 PNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDK--------------RYIIKEKKVKYVTREKEALTQLSGHPGIV 137 (604)
T ss_pred hhhcchhheeccccceeEEEeeecCCCceeeHhhhhH--------------HHHHhhcccchhhHHHHHHHHhhCCCCeE
Confidence 36789999999999999999994 4799999999821 1122334455677899999999 899999
Q ss_pred eEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCC
Q 002250 706 KLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWK 785 (947)
Q Consensus 706 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~ 785 (947)
+++..|+++...|+|+||+++|+|.+++++.+ .+++...+-++.+|+.|++||| +.|||||||||+|||+|+|+.
T Consensus 138 kLy~TFQD~~sLYFvLe~A~nGdll~~i~K~G--sfde~caR~YAAeIldAleylH---~~GIIHRDlKPENILLd~dmh 212 (604)
T KOG0592|consen 138 KLYFTFQDEESLYFVLEYAPNGDLLDLIKKYG--SFDETCARFYAAEILDALEYLH---SNGIIHRDLKPENILLDKDGH 212 (604)
T ss_pred EEEEEeecccceEEEEEecCCCcHHHHHHHhC--cchHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeEcCCCc
Confidence 99999999999999999999999999999865 4777777789999999999999 999999999999999999999
Q ss_pred eEEeccccceecccCCCC-----------cceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCC
Q 002250 786 PRIADFGLAKIVQTGEAG-----------DLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFG 854 (947)
Q Consensus 786 ~kl~DfG~a~~~~~~~~~-----------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~ 854 (947)
++|+|||.|+.+.+.... .....++||..|.+||++..+..++.+|+|||||++|+|+.|++||.+..
T Consensus 213 ikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~N- 291 (604)
T KOG0592|consen 213 IKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAAN- 291 (604)
T ss_pred EEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCcccc-
Confidence 999999999877643221 11135789999999999999999999999999999999999999995432
Q ss_pred CcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 855 DSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
-.-...+.+.-.. . +++.-++.+.+|+.+.+..||.+|+|..||.++
T Consensus 292 ----eyliFqkI~~l~y--------~---fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 292 ----EYLIFQKIQALDY--------E---FPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred ----HHHHHHHHHHhcc--------c---CCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence 1112222222111 1 122223556778889999999999999888765
No 17
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-42 Score=376.99 Aligned_cols=276 Identities=22% Similarity=0.369 Sum_probs=224.2
Q ss_pred hccCCcccccccCceeEEEEEeCC----CcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcccccc
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLNS----GKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNV 704 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 704 (947)
...++.+.||.|.||+||+|+++- ...||||.++.. ..+.+..+|..|+.||.+++||||
T Consensus 629 s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~G----------------ytekqrrdFL~EAsIMGQFdHPNI 692 (996)
T KOG0196|consen 629 SCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAG----------------YTEKQRRDFLSEASIMGQFDHPNI 692 (996)
T ss_pred hheEEEEEEecccccceecccccCCCCcceeEEEeeeccC----------------ccHHHHhhhhhhhhhcccCCCCcE
Confidence 345678899999999999999762 457999998421 123455789999999999999999
Q ss_pred ceEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCC
Q 002250 705 VKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEW 784 (947)
Q Consensus 705 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~ 784 (947)
+++.|+......++||.|||++|+|..+|+...+ ++.+.+...|..+||.||.||. +.++|||||.++|||++.+.
T Consensus 693 IrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DG-qftviQLVgMLrGIAsGMkYLs---dm~YVHRDLAARNILVNsnL 768 (996)
T KOG0196|consen 693 IRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDG-QFTVIQLVGMLRGIASGMKYLS---DMNYVHRDLAARNILVNSNL 768 (996)
T ss_pred EEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCC-ceEeehHHHHHHHHHHHhHHHh---hcCchhhhhhhhheeeccce
Confidence 9999999999999999999999999999998654 5999999999999999999999 89999999999999999999
Q ss_pred CeEEeccccceecccCCCCcceecccc--cccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHH
Q 002250 785 KPRIADFGLAKIVQTGEAGDLTHVIAG--THGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVN 861 (947)
Q Consensus 785 ~~kl~DfG~a~~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~ 861 (947)
.+|++|||+++...++. ....+...| ..+|.|||.+...+++.+|||||||+++||.++ |.+||...
T Consensus 769 vCKVsDFGLSRvledd~-~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdm--------- 838 (996)
T KOG0196|consen 769 VCKVSDFGLSRVLEDDP-EAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM--------- 838 (996)
T ss_pred EEEeccccceeecccCC-CccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCccccc---------
Confidence 99999999999775543 222212222 478999999999999999999999999999998 99998432
Q ss_pred HHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCCCC-cceeeecccccCCCCc
Q 002250 862 WVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAEPCS-VTNIVVKKVGESSPSF 940 (947)
Q Consensus 862 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~-~~~~~~~~~~~~~~~~ 940 (947)
...+.+..+.+...-+-+.+++..+.+||+.||++|-.+||.+.|++.+|.++--.| +.+.+..-.++.|.++
T Consensus 839 ------SNQdVIkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~SLk~~~~~~~r~s~~l 912 (996)
T KOG0196|consen 839 ------SNQDVIKAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPNSLKTIAPESPRPSQPL 912 (996)
T ss_pred ------chHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCchhhcccCCCCCCCcccc
Confidence 222333333344334556688999999999999999999999999999999866555 3444444444444443
No 18
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=2.4e-41 Score=333.41 Aligned_cols=264 Identities=22% Similarity=0.258 Sum_probs=198.7
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
+.|+...++|+|+||+|||++.+ +|+.||||++..+. ....-.+-..||++++++++|||+|.+
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Ese---------------dd~~VkKIAlREIrmLKqLkH~NLVnL 66 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESE---------------DDPVVKKIALREIRMLKQLKHENLVNL 66 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCC---------------ccHHHHHHHHHHHHHHHhcccchHHHH
Confidence 46777889999999999999977 69999999993211 111223446799999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
+++|......++|+||++. ++.+.+... ....+.....++..|++.|+.|+| ++++|||||||+|||++.++.+|
T Consensus 67 iEVFrrkrklhLVFE~~dh-TvL~eLe~~-p~G~~~~~vk~~l~Q~l~ai~~cH---k~n~IHRDIKPENILit~~gvvK 141 (396)
T KOG0593|consen 67 IEVFRRKRKLHLVFEYCDH-TVLHELERY-PNGVPSELVKKYLYQLLKAIHFCH---KNNCIHRDIKPENILITQNGVVK 141 (396)
T ss_pred HHHHHhcceeEEEeeecch-HHHHHHHhc-cCCCCHHHHHHHHHHHHHHhhhhh---hcCeecccCChhheEEecCCcEE
Confidence 9999999999999999965 555555543 345788889999999999999999 89999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH--
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYT-CKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVY-- 864 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~-- 864 (947)
|||||+|+...... ...+..+.|.+|.|||.+.+ .+|+..+||||+||++.||++|.+-|.+.. +-+.+.....
T Consensus 142 LCDFGFAR~L~~pg--d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~S-DiDQLy~I~ktL 218 (396)
T KOG0593|consen 142 LCDFGFARTLSAPG--DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRS-DIDQLYLIRKTL 218 (396)
T ss_pred eccchhhHhhcCCc--chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcc-hHHHHHHHHHHH
Confidence 99999999887322 22334578999999999987 679999999999999999999997764321 1111111111
Q ss_pred --------hhccccccccccccCCC--C----ccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 865 --------SKMDSRDSMLTVVDPNI--S----EILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 865 --------~~~~~~~~~~~~~d~~~--~----~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
........+.-+.-|.. . .-......-+++++..|++.||++|++-+|++.
T Consensus 219 G~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 219 GNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred cccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 11111111111111111 1 111223346889999999999999999998874
No 19
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-41 Score=351.00 Aligned_cols=259 Identities=27% Similarity=0.408 Sum_probs=206.3
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
.+|...+.||+|+||+||++... +|...|||.+... .....+.+++|+.++++++|||||++
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~-----------------~~~~~~~l~~Ei~iL~~l~~p~IV~~ 79 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELE-----------------DSPTSESLEREIRILSRLNHPNIVQY 79 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecc-----------------cchhHHHHHHHHHHHHhCCCCCEEee
Confidence 45777889999999999999965 5899999987211 01115668999999999999999999
Q ss_pred EEEEecCC--ccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecC-CC
Q 002250 708 YCSITSED--SNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDL-EW 784 (947)
Q Consensus 708 ~~~~~~~~--~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~-~~ 784 (947)
+|.....+ .+++.|||+++|+|.+++.+.+. .+++..+...+.||++||+||| +++||||||||+|||++. ++
T Consensus 80 ~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylH---s~g~vH~DiK~~NiLl~~~~~ 155 (313)
T KOG0198|consen 80 YGSSSSRENDEYNIFMEYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLH---SKGIVHCDIKPANILLDPSNG 155 (313)
T ss_pred CCccccccCeeeEeeeeccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHH---hCCEeccCcccceEEEeCCCC
Confidence 99865555 58899999999999999999776 7999999999999999999999 999999999999999999 79
Q ss_pred CeEEeccccceeccc-CCCCcceecccccccccCccccccCC-CCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHH
Q 002250 785 KPRIADFGLAKIVQT-GEAGDLTHVIAGTHGYIAPEYAYTCK-INEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNW 862 (947)
Q Consensus 785 ~~kl~DfG~a~~~~~-~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~ 862 (947)
.+||+|||+++.... ...........||+.|||||++..+. ...++||||+||++.||+||++||... ....++
T Consensus 156 ~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~----~~~~~~ 231 (313)
T KOG0198|consen 156 DVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF----FEEAEA 231 (313)
T ss_pred eEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh----cchHHH
Confidence 999999999986653 11122233568999999999999643 345999999999999999999998432 122222
Q ss_pred HHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccC
Q 002250 863 VYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAE 921 (947)
Q Consensus 863 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~ 921 (947)
........ ..+.++...+....+++.+|+..+|++||||.+++++-.-..
T Consensus 232 ~~~ig~~~---------~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~ 281 (313)
T KOG0198|consen 232 LLLIGRED---------SLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQ 281 (313)
T ss_pred HHHHhccC---------CCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhc
Confidence 22221111 223445556667788888999999999999999998765443
No 20
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-41 Score=354.01 Aligned_cols=266 Identities=21% Similarity=0.243 Sum_probs=208.7
Q ss_pred HHhhccCCcccccccCceeEEEEE-eCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcc-ccc
Q 002250 626 EIIDAVKPENLIGKGGSGNVYKVV-LNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVR-HVN 703 (947)
Q Consensus 626 ~~~~~~~~~~~iG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~n 703 (947)
.+.++|...++||.|+||.||+|+ ..+|..||||+++.. ....+.---.||++.+++++ |||
T Consensus 7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~K----------------f~s~ee~~nLREvksL~kln~hpn 70 (538)
T KOG0661|consen 7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKK----------------FYSWEECMNLREVKSLRKLNPHPN 70 (538)
T ss_pred hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhh----------------hccHHHHHHHHHHHHHHhcCCCCc
Confidence 456889999999999999999999 447999999998421 11122223458999999998 999
Q ss_pred cceEEEEEecCC-ccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecC
Q 002250 704 VVKLYCSITSED-SNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDL 782 (947)
Q Consensus 704 iv~l~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~ 782 (947)
||++.+++.+.+ ..|+||||| ..+|.+.++.. +..+++..+..|+.||.+||+|+| .+|+.|||+||+|||+..
T Consensus 71 iikL~Evi~d~~~~L~fVfE~M-d~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiH---k~GfFHRDlKPENiLi~~ 145 (538)
T KOG0661|consen 71 IIKLKEVIRDNDRILYFVFEFM-DCNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIH---KHGFFHRDLKPENILISG 145 (538)
T ss_pred chhhHHHhhccCceEeeeHHhh-hhhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHH---hcCcccccCChhheEecc
Confidence 999999999988 889999999 56999999985 778999999999999999999999 899999999999999999
Q ss_pred CCCeEEeccccceecccCCCCcceecccccccccCccccc-cCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHH
Q 002250 783 EWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAY-TCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVN 861 (947)
Q Consensus 783 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~ 861 (947)
...+||+|||+||........ +..+.|.+|.|||++. .+.|+.++||||+|||++|+.+=++-|.+.. +-+.+..
T Consensus 146 ~~~iKiaDFGLARev~SkpPY---TeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~s-E~Dqi~K 221 (538)
T KOG0661|consen 146 NDVIKIADFGLAREVRSKPPY---TEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGAS-EIDQIYK 221 (538)
T ss_pred cceeEecccccccccccCCCc---chhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCc-HHHHHHH
Confidence 999999999999987665443 3457899999999884 5679999999999999999999887764321 1112221
Q ss_pred HHHhhcc---------------ccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 862 WVYSKMD---------------SRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 862 ~~~~~~~---------------~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
....... ....+..+.-..+.........+..+++.+|+.+||++|||+.|.+++
T Consensus 222 Ic~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 222 ICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred HHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 1111100 001111111122233444577789999999999999999999999975
No 21
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-40 Score=350.46 Aligned_cols=265 Identities=23% Similarity=0.332 Sum_probs=218.5
Q ss_pred hccCCcccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
+...+.++||+|-||+|..+....+..||||.+++++.. ....+|.+|+++|.+++|||||+++
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~----------------~~r~~F~kEIkiLsqLkhPNIveLv 601 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATK----------------NARNDFLKEIKILSRLKHPNIVELL 601 (807)
T ss_pred hheehhhhhcCcccceeEEEEecCceEEEEeecCcccch----------------hHHHHHHHHHHHHhccCCCCeeEEE
Confidence 345677899999999999999988899999999765421 2347899999999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRI 788 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 788 (947)
|+|..++.+++|+|||++|+|.+++.+.......-..-.+|+.|||.||+||. +..+||||+.++|+|++.++++||
T Consensus 602 GVC~~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLe---s~nfVHrd~a~rNcLv~~e~~iKi 678 (807)
T KOG1094|consen 602 GVCVQDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLE---SLNFVHRDLATRNCLVDGEFTIKI 678 (807)
T ss_pred eeeecCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHH---hhchhhccccccceeecCcccEEe
Confidence 99999999999999999999999999864444455666779999999999999 899999999999999999999999
Q ss_pred eccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh--CCCCCCCCCCCcccHHHHHHhh
Q 002250 789 ADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT--GKRPIVPEFGDSKDIVNWVYSK 866 (947)
Q Consensus 789 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt--g~~p~~~~~~~~~~~~~~~~~~ 866 (947)
+|||+++....++++......+-..+|||||.+..++++.++|||+||+++||+++ ...||... .+++.++-....
T Consensus 679 adfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~l--t~e~vven~~~~ 756 (807)
T KOG1094|consen 679 ADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQL--TDEQVVENAGEF 756 (807)
T ss_pred cCcccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhh--hHHHHHHhhhhh
Confidence 99999998888887777666777899999999999999999999999999999886 67787432 222222222111
Q ss_pred ccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 002250 867 MDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEA 920 (947)
Q Consensus 867 ~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 920 (947)
.+.... .-....+.-++..++++|.+||+.|.++||+++++...|++.
T Consensus 757 ~~~~~~------~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 757 FRDQGR------QVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred cCCCCc------ceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 111110 111334556677899999999999999999999999998864
No 22
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=9.6e-42 Score=362.35 Aligned_cols=376 Identities=22% Similarity=0.223 Sum_probs=252.9
Q ss_pred EEEccCccccccCCccCCCCCCCCEEECcCcccccccCccccCCCCCcEEEeecccccccCCccCCCCCCccEEeccCCC
Q 002250 162 WLYLTNCSVTGQIPEGIGNLTQLQNLELSDNELFGEIPAGIVKLNKLWQLELYNNSLSGRLPVGFSNLTNLMNFDVSQNR 241 (947)
Q Consensus 162 ~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 241 (947)
.|++++|.+....+..|.++++|+.++|..|.++ .+|.......+|+.|+|.+|.|+..-...+..++.|+.||||.|.
T Consensus 82 ~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~ 160 (873)
T KOG4194|consen 82 TLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNL 160 (873)
T ss_pred eeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhch
Confidence 3555555555555555555555555555555554 445444444445555555555555444555555666666666666
Q ss_pred CCCCCc-cccccCCCCEEEccCccCcccCCCCccCCCcCcEEEccCccccccCCcCccCcccccccccccccccCCCCCC
Q 002250 242 LEGDLS-ELRFLNQLSSLHLFENQFSGEIPEEFGEFKHLTELSLYTNRLTGTLPQKLGSWADFNYVDVSENLLTGPIPPD 320 (947)
Q Consensus 242 l~~~~~-~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~ 320 (947)
|+.++. .+..-.++++|+|++|.|+....+.|..+.+|..|.|+.|+++...+..|.+++.|+.|||..|+|.-.-
T Consensus 161 is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive--- 237 (873)
T KOG4194|consen 161 ISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVE--- 237 (873)
T ss_pred hhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeeh---
Confidence 555442 3444556666666777776666667777777777777777777444455666777777777777765110
Q ss_pred cccCCccceeeecccccCCcCCccccCCCCccEEEcccccccccCCCCCCCCCCcceeccccCCcCCCCCCccccccccc
Q 002250 321 MCKTGAMTDLLVLQNNFNGTVPETYANCKSLIRFRVNNNSLSGTIPPGIWSLPNLSIIDLSTNQFEGPVTDDIGNAKSLA 400 (947)
Q Consensus 321 ~~~~~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 400 (947)
--+|.++.+|+.|.|..|.+.......|+.+.+++.|+|+.|++..+-..++-+++.|+
T Consensus 238 ---------------------~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~ 296 (873)
T KOG4194|consen 238 ---------------------GLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLE 296 (873)
T ss_pred ---------------------hhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhh
Confidence 12466667777777777777766666677777777777777777777777777777777
Q ss_pred EEEccCccccccCCCCCCCCCcceEEEcccCcccCCCCcccccccccchhhccccccCCCCCcccccccccceeeccCce
Q 002250 401 LLLLANNRFSGELPSKISEASSLVSIQLSLNQFSGQIPLDIGKLKKLSSLYLHDNMFSGPLPYSIGSCVSLTDINFAQNS 480 (947)
Q Consensus 401 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 480 (947)
.|+||+|.|...-++.+...++|++|+|++|+|+...+..|..|..|+.|+|++|.+...--..|..+.+|+.|||++|.
T Consensus 297 ~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ 376 (873)
T KOG4194|consen 297 QLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNE 376 (873)
T ss_pred hhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCe
Confidence 77777777777777777778888888888888887777778888888888888888887777778888888888888888
Q ss_pred eeeecCC---CCCccCcCcEEECCCCccCCccCCcc-cccccceeeCCCCcCCCCCCCccc-ccccccccccCCCCCCCC
Q 002250 481 LSGKIPD---SLGSLPSLNSLNLSNNKFSGEIPISL-TYPKLSLLDLSNNQLAGPIPEPLN-IKAFIDSFTGNPGLCSKT 555 (947)
Q Consensus 481 l~~~~p~---~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~~~L~~L~ls~N~l~~~~p~~~~-~~~~~~~~~gN~~~c~~~ 555 (947)
|++.|-+ .|.+|++|+.|+|.+|+|....-..+ .++.|+.|||.+|.|...-|..+. ......-+.--..+|+|.
T Consensus 377 ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m~Lk~Lv~nSssflCDCq 456 (873)
T KOG4194|consen 377 LSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPMELKELVMNSSSFLCDCQ 456 (873)
T ss_pred EEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccchhhhhhhcccceEEecc
Confidence 8876654 46678888888888888884444444 368888888888888776666553 222223344445799999
Q ss_pred ccccCcc
Q 002250 556 DEYFKSC 562 (947)
Q Consensus 556 ~~~~~~~ 562 (947)
+.|+..+
T Consensus 457 l~Wl~qW 463 (873)
T KOG4194|consen 457 LKWLAQW 463 (873)
T ss_pred HHHHHHH
Confidence 9885433
No 23
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-41 Score=354.72 Aligned_cols=244 Identities=28% Similarity=0.421 Sum_probs=207.6
Q ss_pred CCcccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEEEE
Q 002250 632 KPENLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYCSI 711 (947)
Q Consensus 632 ~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 711 (947)
...+-+|.|+-|.||.|+++ ++.||||+++ +.-+.+|+.|++|+||||++|.|+|
T Consensus 127 sELeWlGSGaQGAVF~Grl~-netVAVKKV~------------------------elkETdIKHLRkLkH~NII~FkGVC 181 (904)
T KOG4721|consen 127 SELEWLGSGAQGAVFLGRLH-NETVAVKKVR------------------------ELKETDIKHLRKLKHPNIITFKGVC 181 (904)
T ss_pred hhhhhhccCcccceeeeecc-CceehhHHHh------------------------hhhhhhHHHHHhccCcceeeEeeee
Confidence 34567999999999999998 7899999872 1224689999999999999999999
Q ss_pred ecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEecc
Q 002250 712 TSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADF 791 (947)
Q Consensus 712 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 791 (947)
.....++|||||++.|.|...++. +.++.......+..+||.||.||| .+.|||||||.-||||..+..+||+||
T Consensus 182 tqsPcyCIiMEfCa~GqL~~VLka--~~~itp~llv~Wsk~IA~GM~YLH---~hKIIHRDLKSPNiLIs~~d~VKIsDF 256 (904)
T KOG4721|consen 182 TQSPCYCIIMEFCAQGQLYEVLKA--GRPITPSLLVDWSKGIAGGMNYLH---LHKIIHRDLKSPNILISYDDVVKISDF 256 (904)
T ss_pred cCCceeEEeeeccccccHHHHHhc--cCccCHHHHHHHHHHhhhhhHHHH---HhhHhhhccCCCceEeeccceEEeccc
Confidence 999999999999999999999997 456777788889999999999999 899999999999999999999999999
Q ss_pred ccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhccccc
Q 002250 792 GLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDSRD 871 (947)
Q Consensus 792 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 871 (947)
|.++...... ..-.++||..|||||+++....++|+||||||||+|||+||..||... +...
T Consensus 257 GTS~e~~~~S---TkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdV---------------dssA 318 (904)
T KOG4721|consen 257 GTSKELSDKS---TKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDV---------------DSSA 318 (904)
T ss_pred cchHhhhhhh---hhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCcccc---------------chhe
Confidence 9998665442 233678999999999999999999999999999999999999998432 1122
Q ss_pred cccccccCCC-CccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCCC
Q 002250 872 SMLTVVDPNI-SEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAEPC 923 (947)
Q Consensus 872 ~~~~~~d~~~-~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 923 (947)
.+.-+-...+ -..+..++..+.-++..||+..|..||++.+++.+|+-+.|-
T Consensus 319 IIwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~pe 371 (904)
T KOG4721|consen 319 IIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASPE 371 (904)
T ss_pred eEEeccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCHH
Confidence 2222222222 446778888999999999999999999999999999977653
No 24
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-40 Score=389.06 Aligned_cols=273 Identities=25% Similarity=0.363 Sum_probs=220.6
Q ss_pred hccCCcccccccCceeEEEEEeCC--Cc----EEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcccc
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLNS--GK----ELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHV 702 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~~--~~----~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 702 (947)
+..+..+.||+|.||.||.|...+ |. .||||.+.+. ...++..+|.+|+.+|++++||
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~----------------~~~~~~~~Fl~Ea~~m~~f~Hp 755 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRL----------------SSEQEVSDFLKEALLMSKFDHP 755 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEecccc----------------CCHHHHHHHHHHHHHHhcCCCc
Confidence 345567889999999999999653 33 4899988422 2235678899999999999999
Q ss_pred ccceEEEEEecCCccEEEEeccCCCChHHHhhhcC-----CccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCC
Q 002250 703 NVVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCH-----KIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSN 777 (947)
Q Consensus 703 niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-----~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~N 777 (947)
|||+++|.+-+.+..+|++|||++|+|..++++.+ ...+.....+.++.|||+|++||+ ++++|||||.++|
T Consensus 756 Niv~liGv~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe---~~~fvHRDLAaRN 832 (1025)
T KOG1095|consen 756 NIVSLIGVCLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLE---SKHFVHRDLAARN 832 (1025)
T ss_pred ceeeEEEeecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHH---hCCCcCcchhhhh
Confidence 99999999999999999999999999999999752 346788899999999999999999 8999999999999
Q ss_pred eEecCCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCc
Q 002250 778 ILLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDS 856 (947)
Q Consensus 778 Ill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~ 856 (947)
+|++....|||+|||+|+.....++........-..+|||||.++++.++.|+|||||||++||++| |..||... ..
T Consensus 833 CLL~~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~--~n 910 (1025)
T KOG1095|consen 833 CLLDERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSR--SN 910 (1025)
T ss_pred eeecccCcEEEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCc--ch
Confidence 9999999999999999996655554433322233578999999999999999999999999999999 88998432 11
Q ss_pred ccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCCCCcceeeeccccc
Q 002250 857 KDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAEPCSVTNIVVKKVGE 935 (947)
Q Consensus 857 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~~~~~~~~~~ 935 (947)
.++.. .+.....-+.+..++..++++|..||+.+|++||++..+++.+.++.+.....+.+..++.
T Consensus 911 ~~v~~-------------~~~~ggRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~~~~~~~~~a~ 976 (1025)
T KOG1095|consen 911 FEVLL-------------DVLEGGRLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAALGTIYGPLPAD 976 (1025)
T ss_pred HHHHH-------------HHHhCCccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhccCcccccccc
Confidence 11211 1112222345667788899999999999999999999999999987766555555554443
No 25
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.1e-40 Score=345.64 Aligned_cols=267 Identities=28% Similarity=0.344 Sum_probs=204.5
Q ss_pred hhccCCcccccccCceeEEEEE-eCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccce
Q 002250 628 IDAVKPENLIGKGGSGNVYKVV-LNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVK 706 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 706 (947)
.+.|+..++||+|.||.||||+ ..+|+.||+|++.-+. .......-..+||.||++|+||||++
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~---------------~~~~~~~t~~REI~ILr~l~HpNIik 180 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDN---------------EKEGFPITAIREIKILRRLDHPNIIK 180 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeeccc---------------CCCcchHHHHHHHHHHHhcCCCcccc
Confidence 3667788899999999999999 5689999999994322 12233445679999999999999999
Q ss_pred EEEEEecC--CccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCC
Q 002250 707 LYCSITSE--DSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEW 784 (947)
Q Consensus 707 l~~~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~ 784 (947)
+.+...+. ...|||+|||+. +|.-++.. ....++..++..++.|++.||+|+| +++|+|||||.+|||+|.+|
T Consensus 181 L~eivt~~~~~siYlVFeYMdh-DL~GLl~~-p~vkft~~qIKc~mkQLl~Gl~~cH---~~gvlHRDIK~SNiLidn~G 255 (560)
T KOG0600|consen 181 LEEIVTSKLSGSIYLVFEYMDH-DLSGLLSS-PGVKFTEPQIKCYMKQLLEGLEYCH---SRGVLHRDIKGSNILIDNNG 255 (560)
T ss_pred eeeEEEecCCceEEEEEecccc-hhhhhhcC-CCcccChHHHHHHHHHHHHHHHHHh---hcCeeeccccccceEEcCCC
Confidence 99998876 789999999965 78777765 4567999999999999999999999 99999999999999999999
Q ss_pred CeEEeccccceecccCCCCcceecccccccccCccccccC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCC--------
Q 002250 785 KPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTC-KINEKSDVYSFGVVLMELVTGKRPIVPEFGD-------- 855 (947)
Q Consensus 785 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~-------- 855 (947)
.+||+|||+|+++........+ ..+-|.+|.|||.+.+. .|+.++|+||.|||+.||++|++.|.+..+-
T Consensus 256 ~LKiaDFGLAr~y~~~~~~~~T-~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfk 334 (560)
T KOG0600|consen 256 VLKIADFGLARFYTPSGSAPYT-SRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFK 334 (560)
T ss_pred CEEeccccceeeccCCCCcccc-cceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHH
Confidence 9999999999988766544433 45679999999999875 5999999999999999999999887543210
Q ss_pred ---cccHHHHHHhhcccccccc--ccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 856 ---SKDIVNWVYSKMDSRDSML--TVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 856 ---~~~~~~~~~~~~~~~~~~~--~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
......|....+.....+. ......+.+.....+...++++..++..||++|.|+.++++
T Consensus 335 lcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 335 LCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred HhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 0011112211111111100 00011112222233456788899999999999999999985
No 26
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1.4e-39 Score=316.02 Aligned_cols=265 Identities=22% Similarity=0.336 Sum_probs=205.9
Q ss_pred hccCCcccccccCceeEEEEE-eCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVV-LNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
++|...+++|+|.||.||+|+ ..+|+.||||++.... ....-.....|||+.++.++|+||+.+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~---------------~kdGi~~talREIK~Lqel~h~nIi~L 66 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGN---------------AKDGINRTALREIKLLQELKHPNIIEL 66 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccc---------------cccCccHHHHHHHHHHHHccCcchhhh
Confidence 467788999999999999999 5589999999995331 111223456789999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
+++|...+..-+|+|||+ .+|+..++. ....+...++..++.++.+|++|+| ++.|+|||+||.|+|++.+|.+|
T Consensus 67 iD~F~~~~~l~lVfEfm~-tdLe~vIkd-~~i~l~pa~iK~y~~m~LkGl~y~H---~~~IlHRDlKPnNLLis~~g~lK 141 (318)
T KOG0659|consen 67 IDVFPHKSNLSLVFEFMP-TDLEVVIKD-KNIILSPADIKSYMLMTLKGLAYCH---SKWILHRDLKPNNLLISSDGQLK 141 (318)
T ss_pred hhhccCCCceEEEEEecc-ccHHHHhcc-cccccCHHHHHHHHHHHHHHHHHHH---hhhhhcccCCccceEEcCCCcEE
Confidence 999999999999999995 489998887 4567899999999999999999999 89999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccccCC-CCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCK-INEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSK 866 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 866 (947)
|+|||+|+.+........ ..+-|.+|.|||.+++.+ |+..+||||.||++.||+-|. ||.+...+-+.+.......
T Consensus 142 iADFGLAr~f~~p~~~~~--~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~-P~fpG~sDidQL~~If~~L 218 (318)
T KOG0659|consen 142 IADFGLARFFGSPNRIQT--HQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRV-PFFPGDSDIDQLSKIFRAL 218 (318)
T ss_pred eecccchhccCCCCcccc--cceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccC-CCCCCCchHHHHHHHHHHc
Confidence 999999998876554332 336799999999998865 999999999999999999886 4544333333333222222
Q ss_pred cccc-ccccccc------------cCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 867 MDSR-DSMLTVV------------DPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 867 ~~~~-~~~~~~~------------d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
.... +.+.++. .+........+....++++..++.+||.+|+|++|++++
T Consensus 219 GTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 219 GTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred CCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 1111 1111100 011112334455667999999999999999999999964
No 27
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-40 Score=351.25 Aligned_cols=268 Identities=23% Similarity=0.335 Sum_probs=217.0
Q ss_pred hhccCCcccccccCceeEEEEE-eCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccce
Q 002250 628 IDAVKPENLIGKGGSGNVYKVV-LNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVK 706 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 706 (947)
...|...+.||+|+.|.||.|. ..+++.||||++.. ..+...+-+..|+.+|+..+|+|||+
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l-----------------~~Q~~keLilnEi~Vm~~~~H~NiVn 334 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDL-----------------RKQPKKELLLNEILVMRDLHHPNIVN 334 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCCceEEEEEEEe-----------------ccCCchhhhHHHHHHHHhccchHHHH
Confidence 3567778899999999999999 55789999999832 22344566789999999999999999
Q ss_pred EEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCe
Q 002250 707 LYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKP 786 (947)
Q Consensus 707 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 786 (947)
+++.|...+..|+|||||+||+|.|.+... .+++.++..|+.++++||+||| .++|+|||||.+|||++.+|.+
T Consensus 335 fl~Sylv~deLWVVMEym~ggsLTDvVt~~---~~~E~qIA~Icre~l~aL~fLH---~~gIiHrDIKSDnILL~~~g~v 408 (550)
T KOG0578|consen 335 FLDSYLVGDELWVVMEYMEGGSLTDVVTKT---RMTEGQIAAICREILQGLKFLH---ARGIIHRDIKSDNILLTMDGSV 408 (550)
T ss_pred HHHHhcccceeEEEEeecCCCchhhhhhcc---cccHHHHHHHHHHHHHHHHHHH---hcceeeeccccceeEeccCCcE
Confidence 999999999999999999999999999873 4899999999999999999999 9999999999999999999999
Q ss_pred EEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 002250 787 RIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSK 866 (947)
Q Consensus 787 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 866 (947)
||+|||++........ .....+||+.|||||+.....|++|+||||||++++||+.|.+||..+ +-.+-++-.
T Consensus 409 KltDFGFcaqi~~~~~--KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE-----~PlrAlyLI 481 (550)
T KOG0578|consen 409 KLTDFGFCAQISEEQS--KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNE-----NPLRALYLI 481 (550)
T ss_pred EEeeeeeeeccccccC--ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCC-----ChHHHHHHH
Confidence 9999999987766554 233568999999999999999999999999999999999999999532 111111111
Q ss_pred ccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCCCCcceeeeccc
Q 002250 867 MDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAEPCSVTNIVVKKV 933 (947)
Q Consensus 867 ~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~~~~~~~~ 933 (947)
..... +. -..++.....+.++..+|+..||++||++.|++++=--..+++...+.+-+.
T Consensus 482 a~ng~-------P~-lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a~p~ssL~pLi~ 540 (550)
T KOG0578|consen 482 ATNGT-------PK-LKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKMAKPESSLNPLIL 540 (550)
T ss_pred hhcCC-------CC-cCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhhcCCHHHhHHHHH
Confidence 11111 11 1234455677888999999999999999999997633344555545544433
No 28
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=1.2e-39 Score=362.62 Aligned_cols=260 Identities=25% Similarity=0.364 Sum_probs=202.2
Q ss_pred hccCCcccccccCceeEEEEEe------CCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-cc
Q 002250 629 DAVKPENLIGKGGSGNVYKVVL------NSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-RH 701 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h 701 (947)
++|++.+.||+|+||.||+|.. .+++.||||++.... .......+.+|+.+++++ +|
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~----------------~~~~~~~~~~E~~~l~~l~~h 70 (338)
T cd05102 7 DRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA----------------TASEHKALMSELKILIHIGNH 70 (338)
T ss_pred hHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc----------------chHHHHHHHHHHHHHHHhccC
Confidence 6789999999999999999974 235689999883110 112345688999999999 89
Q ss_pred cccceEEEEEecCC-ccEEEEeccCCCChHHHhhhcC-------------------------------------------
Q 002250 702 VNVVKLYCSITSED-SNLLVYEYLPNGSLWDRLHTCH------------------------------------------- 737 (947)
Q Consensus 702 ~niv~l~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~------------------------------------------- 737 (947)
|||+++++++...+ ..++||||+++|+|.+++....
T Consensus 71 ~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (338)
T cd05102 71 LNVVNLLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQ 150 (338)
T ss_pred cceeeEEeEecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccc
Confidence 99999999887654 5789999999999999987532
Q ss_pred -----------------CccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEeccccceecccC
Q 002250 738 -----------------KIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFGLAKIVQTG 800 (947)
Q Consensus 738 -----------------~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 800 (947)
..++++.....++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~ 227 (338)
T cd05102 151 PSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKD 227 (338)
T ss_pred cccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCccceEEEcCCCcEEEeecccccccccC
Confidence 124778888999999999999999 899999999999999999999999999999865433
Q ss_pred CCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhccccccccccccC
Q 002250 801 EAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNWVYSKMDSRDSMLTVVDP 879 (947)
Q Consensus 801 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 879 (947)
..........++..|+|||++.+..++.++|||||||++|||++ |..||..... ...+.. ......
T Consensus 228 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~-~~~~~~----~~~~~~-------- 294 (338)
T cd05102 228 PDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQI-NEEFCQ----RLKDGT-------- 294 (338)
T ss_pred cchhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCc-cHHHHH----HHhcCC--------
Confidence 22222223346788999999999899999999999999999997 9999854221 111111 111111
Q ss_pred CCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccC
Q 002250 880 NISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAE 921 (947)
Q Consensus 880 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~ 921 (947)
....+...+..+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 295 -~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~ 335 (338)
T cd05102 295 -RMRAPENATPEIYRIMLACWQGDPKERPTFSALVEILGDLL 335 (338)
T ss_pred -CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 11112233456889999999999999999999999999754
No 29
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=4.1e-44 Score=365.07 Aligned_cols=480 Identities=27% Similarity=0.364 Sum_probs=384.6
Q ss_pred ccccCCcccceeeccCccccCcCchhhhcCCCccEEeCcCccCcCCCCCcccccccceeecCCCCccCccCcccccccCC
Q 002250 55 DSICGLQALQKINLGTNFLYGTITEGLKSCTRLQVLDLGNNSFSGEVPDLSMLHELSFLNLNSSGISGKFPWKSLENLTN 134 (947)
Q Consensus 55 ~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~l~~l~~ 134 (947)
+....-..|++|.+++|.+ ..+.+.+.++..|++|++++|.++..++.++.+.+++.|+.++|+++ .+| ..+..+.+
T Consensus 39 e~wW~qv~l~~lils~N~l-~~l~~dl~nL~~l~vl~~~~n~l~~lp~aig~l~~l~~l~vs~n~ls-~lp-~~i~s~~~ 115 (565)
T KOG0472|consen 39 ENWWEQVDLQKLILSHNDL-EVLREDLKNLACLTVLNVHDNKLSQLPAAIGELEALKSLNVSHNKLS-ELP-EQIGSLIS 115 (565)
T ss_pred hhhhhhcchhhhhhccCch-hhccHhhhcccceeEEEeccchhhhCCHHHHHHHHHHHhhcccchHh-hcc-HHHhhhhh
Confidence 3455666788999999998 45566788899999999999999988999999999999999999997 555 57888999
Q ss_pred CceeeCCCCCCCCCCCChhhcccccCcEEEccCccccccCCccCCCCCCCCEEECcCcccccccCccccCCCCCcEEEee
Q 002250 135 LEFLSLGDNPFDPSPFPMEVLKLEKLYWLYLTNCSVTGQIPEGIGNLTQLQNLELSDNELFGEIPAGIVKLNKLWQLELY 214 (947)
Q Consensus 135 L~~L~Ls~n~i~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~ 214 (947)
|+.|+.++|.+.. .+..++.+-.|+.|+..+|+++ ..|+.+.++.+|..|++.+|++... |+..-.++.|++||+.
T Consensus 116 l~~l~~s~n~~~e--l~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l-~~~~i~m~~L~~ld~~ 191 (565)
T KOG0472|consen 116 LVKLDCSSNELKE--LPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKAL-PENHIAMKRLKHLDCN 191 (565)
T ss_pred hhhhhccccceee--cCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhC-CHHHHHHHHHHhcccc
Confidence 9999999998865 6778889999999999999998 6788888999999999999999744 4444448999999999
Q ss_pred cccccccCCccCCCCCCccEEeccCCCCCCCCccccccCCCCEEEccCccCcccCCCCcc-CCCcCcEEEccCccccccC
Q 002250 215 NNSLSGRLPVGFSNLTNLMNFDVSQNRLEGDLSELRFLNQLSSLHLFENQFSGEIPEEFG-EFKHLTELSLYTNRLTGTL 293 (947)
Q Consensus 215 ~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~-~l~~L~~L~L~~N~l~~~~ 293 (947)
+|.++ .+|..++.+.+|.-|+|.+|++...| +|..+..|++|+++.|+|. .+|.+.. ++++|..|||.+|+++ +.
T Consensus 192 ~N~L~-tlP~~lg~l~~L~~LyL~~Nki~~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~ 267 (565)
T KOG0472|consen 192 SNLLE-TLPPELGGLESLELLYLRRNKIRFLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EV 267 (565)
T ss_pred hhhhh-cCChhhcchhhhHHHHhhhcccccCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cC
Confidence 99998 78888999999999999999998766 8888999999999999998 6666655 8899999999999998 88
Q ss_pred CcCccCcccccccccccccccCCCCCCcccCCccceeeecccccCCcCCcccc-----CCCCccEE----Eccccc----
Q 002250 294 PQKLGSWADFNYVDVSENLLTGPIPPDMCKTGAMTDLLVLQNNFNGTVPETYA-----NCKSLIRF----RVNNNS---- 360 (947)
Q Consensus 294 p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~L~l~~n~~~~~~p~~~~-----~l~~L~~L----~L~~n~---- 360 (947)
|+.+.-+.+|.+||+|+|.|+ .+|.+++++ .+..|.+.+|.+.+.--+.+. -++.|+.- .++...
T Consensus 268 Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e 345 (565)
T KOG0472|consen 268 PDEICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTE 345 (565)
T ss_pred chHHHHhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCccccc
Confidence 999999999999999999998 678888887 788888888876432111111 11112110 011110
Q ss_pred ccccCCC----CCCCCCCcceeccccCCcCCCCCCcccccc--cccEEEccCccccccCCCCCCCCCcceE-EEcccCcc
Q 002250 361 LSGTIPP----GIWSLPNLSIIDLSTNQFEGPVTDDIGNAK--SLALLLLANNRFSGELPSKISEASSLVS-IQLSLNQF 433 (947)
Q Consensus 361 l~~~~p~----~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~--~L~~L~L~~N~l~~~~p~~~~~l~~L~~-L~Ls~N~l 433 (947)
=.+..|. ....+.+.+.|+++.-+++.++.+.|.... -....+++.|++. ++|..+..+..+.+ +.+++|.+
T Consensus 346 ~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~i 424 (565)
T KOG0472|consen 346 TAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKI 424 (565)
T ss_pred ccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCcc
Confidence 0001111 122356789999999999976555554432 3788999999998 89998888877655 45566666
Q ss_pred cCCCCcccccccccchhhccccccCCCCCcccccccccceeeccCceeeeecCCCCCccCcCcEEECCCCccCCccCCcc
Q 002250 434 SGQIPLDIGKLKKLSSLYLHDNMFSGPLPYSIGSCVSLTDINFAQNSLSGKIPDSLGSLPSLNSLNLSNNKFSGEIPISL 513 (947)
Q Consensus 434 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 513 (947)
. -+|..+..+++|..|+|++|.+. .+|..++.+..|+.||+|+|+|. .+|..+..+..|+.+-.++|++....|..+
T Consensus 425 s-fv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l 501 (565)
T KOG0472|consen 425 S-FVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGL 501 (565)
T ss_pred c-cchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHh
Confidence 5 89999999999999999999997 79999999999999999999999 899999989999999999999998887755
Q ss_pred c-ccccceeeCCCCcCCCCCCCccc-ccccccccccCCCC
Q 002250 514 T-YPKLSLLDLSNNQLAGPIPEPLN-IKAFIDSFTGNPGL 551 (947)
Q Consensus 514 ~-~~~L~~L~ls~N~l~~~~p~~~~-~~~~~~~~~gN~~~ 551 (947)
. +.+|.+|||.+|.+...+|.-.+ .........|||+.
T Consensus 502 ~nm~nL~tLDL~nNdlq~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 502 KNMRNLTTLDLQNNDLQQIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred hhhhhcceeccCCCchhhCChhhccccceeEEEecCCccC
Confidence 4 69999999999999987776555 34456678999977
No 30
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-40 Score=360.04 Aligned_cols=263 Identities=27% Similarity=0.373 Sum_probs=210.0
Q ss_pred hccCCcccccccCceeEEEEEeCC--C---cEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccc
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLNS--G---KELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVN 703 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~~--~---~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n 703 (947)
++....+.||+|+||.||+|+++. + ..||||....+. ........+|.+|++++++++|||
T Consensus 157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~--------------~~~~~~~~e~m~EArvMr~l~H~N 222 (474)
T KOG0194|consen 157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSS--------------ELTKEQIKEFMKEARVMRQLNHPN 222 (474)
T ss_pred cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccc--------------cccHHHHHHHHHHHHHHHhCCCCC
Confidence 445556899999999999999653 2 238999874211 112345678999999999999999
Q ss_pred cceEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCC
Q 002250 704 VVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLE 783 (947)
Q Consensus 704 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~ 783 (947)
||++||++..+...|+|||+++||+|.+++++.+. .++...+..++.++|.||+||| +++++||||.++|+|++.+
T Consensus 223 VVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh---~k~~IHRDIAARNcL~~~~ 298 (474)
T KOG0194|consen 223 VVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLH---SKNCIHRDIAARNCLYSKK 298 (474)
T ss_pred EEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHH---HCCCcchhHhHHHheecCC
Confidence 99999999999999999999999999999998544 6899999999999999999999 9999999999999999999
Q ss_pred CCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHH
Q 002250 784 WKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNW 862 (947)
Q Consensus 784 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~ 862 (947)
+.+||+|||+++....-.... ....-..+|+|||.+..+.|++++|||||||++||+++ |..||.+.. ..+...+
T Consensus 299 ~~vKISDFGLs~~~~~~~~~~--~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~--~~~v~~k 374 (474)
T KOG0194|consen 299 GVVKISDFGLSRAGSQYVMKK--FLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMK--NYEVKAK 374 (474)
T ss_pred CeEEeCccccccCCcceeecc--ccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCC--HHHHHHH
Confidence 999999999987543111111 11234679999999999999999999999999999999 888985431 1111111
Q ss_pred HHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCCCCc
Q 002250 863 VYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAEPCSV 925 (947)
Q Consensus 863 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~ 925 (947)
+ ... ......+...+..+..++.+||..+|++||+|.++.+.++.+..+..
T Consensus 375 I---~~~---------~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~ 425 (474)
T KOG0194|consen 375 I---VKN---------GYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE 425 (474)
T ss_pred H---Hhc---------CccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence 1 011 11122333566778888889999999999999999999999887754
No 31
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=9.1e-40 Score=346.31 Aligned_cols=248 Identities=27% Similarity=0.356 Sum_probs=208.2
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
++|.+.+.||+|+||.||||+-+ +.+.||+|.+.+. .+...+...+.+|++++++++|||||.+
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~---------------gr~~k~l~~l~~ev~i~r~lkHpniv~m 66 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKS---------------GRNEKELKNLRQEVRILRSLKHPNIVEM 66 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhc---------------CCchHHHHHHHHHHHHHHhcCCcchhhH
Confidence 56888899999999999999965 6889999998321 2223455678999999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
+++|+...+.++|.||+.| +|..++... ..+++..++.++.+++.||.||| +.+|.|||+||+||+++..+.+|
T Consensus 67 ~esfEt~~~~~vVte~a~g-~L~~il~~d--~~lpEe~v~~~a~~LVsaL~yLh---s~rilhrd~kPqniLl~~~~~~K 140 (808)
T KOG0597|consen 67 LESFETSAHLWVVTEYAVG-DLFTILEQD--GKLPEEQVRAIAYDLVSALYYLH---SNRILHRDMKPQNILLEKGGTLK 140 (808)
T ss_pred HHhhcccceEEEEehhhhh-hHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHH---hcCcccccCCcceeeecCCCcee
Confidence 9999999999999999976 999999874 45889999999999999999999 99999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKM 867 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 867 (947)
+||||+|+.+..... ..+.+.|||-|||||...++.|+..+|+||+||++||+++|++||. ...+...+....
T Consensus 141 lcdFg~Ar~m~~~t~--vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~-----a~si~~Lv~~I~ 213 (808)
T KOG0597|consen 141 LCDFGLARAMSTNTS--VLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFY-----ARSITQLVKSIL 213 (808)
T ss_pred echhhhhhhcccCce--eeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCch-----HHHHHHHHHHHh
Confidence 999999997765432 2345689999999999999999999999999999999999999994 334444433332
Q ss_pred cccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 868 DSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 868 ~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
.+... .+......+..++...+.+||.+|.|-.+++.
T Consensus 214 ~d~v~-----------~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 214 KDPVK-----------PPSTASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred cCCCC-----------CcccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 22211 22355667888999999999999999888764
No 32
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-39 Score=318.70 Aligned_cols=263 Identities=24% Similarity=0.294 Sum_probs=206.9
Q ss_pred hhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccce
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVK 706 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 706 (947)
.++|+..+.+|.|+||.|..++.+ +|..+|+|++... ...+....+....|..+++.+.||++++
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~--------------~vVklKQveH~~nEk~vL~~v~~PFlv~ 108 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQ--------------KVVKLKQVEHTHNEKRVLKAVSHPFLVK 108 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHH--------------HHHHHHHHHHHhhHHHHHhhccCceeEE
Confidence 467888999999999999999966 6889999998311 1112234566778999999999999999
Q ss_pred EEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCe
Q 002250 707 LYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKP 786 (947)
Q Consensus 707 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 786 (947)
+++.|.+.+..||||||++||.|..++++.++ +++...+-+|.+|+.|++||| +..|++||+||+|||+|.+|.+
T Consensus 109 l~~t~~d~~~lymvmeyv~GGElFS~Lrk~~r--F~e~~arFYAAeivlAleylH---~~~iiYRDLKPENiLlD~~G~i 183 (355)
T KOG0616|consen 109 LYGTFKDNSNLYMVMEYVPGGELFSYLRKSGR--FSEPHARFYAAEIVLALEYLH---SLDIIYRDLKPENLLLDQNGHI 183 (355)
T ss_pred EEEeeccCCeEEEEEeccCCccHHHHHHhcCC--CCchhHHHHHHHHHHHHHHHH---hcCeeeccCChHHeeeccCCcE
Confidence 99999999999999999999999999998655 777788889999999999999 8999999999999999999999
Q ss_pred EEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 002250 787 RIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSK 866 (947)
Q Consensus 787 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 866 (947)
||+|||.|+.+... +-..+|||.|+|||++....|..++|.|||||++|||+.|.+||..... .......
T Consensus 184 KitDFGFAK~v~~r-----T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~-----~~iY~KI 253 (355)
T KOG0616|consen 184 KITDFGFAKRVSGR-----TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP-----IQIYEKI 253 (355)
T ss_pred EEEeccceEEecCc-----EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh-----HHHHHHH
Confidence 99999999876543 3356899999999999999999999999999999999999999964322 2332333
Q ss_pred ccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCC-CCHHHHHHHhhccCCCCcceeee
Q 002250 867 MDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFR-PSMRVVVQMLEEAEPCSVTNIVV 930 (947)
Q Consensus 867 ~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~R-Pt~~ev~~~L~~~~~~~~~~~~~ 930 (947)
....-. ++.--...+.+++...++.|-.+| =++..=.+-++......++++..
T Consensus 254 ~~~~v~-----------fP~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~W~~ 307 (355)
T KOG0616|consen 254 LEGKVK-----------FPSYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVDWEA 307 (355)
T ss_pred HhCccc-----------CCcccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccccHHH
Confidence 333322 222233446667778888888888 33332333344444444444433
No 33
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-40 Score=341.92 Aligned_cols=257 Identities=26% Similarity=0.402 Sum_probs=210.8
Q ss_pred hccCCcccccccCceeEEEEEe-CCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVL-NSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
..|+..+.||+|+||.||||.. ..++.||+|++. ........+++++|+.++..++++||.++
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~----------------Le~~~deIediqqei~~Ls~~~~~~it~y 76 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIID----------------LEEAEDEIEDIQQEISVLSQCDSPNITEY 76 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEec----------------hhhcchhhHHHHHHHHHHHhcCcchHHhh
Confidence 3566778999999999999995 478999999983 22334556789999999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
||.+..+...+++|||+.||++.+.++... .+++.....+..++..|+.|+| ..+.+|||||+.||++..+|.+|
T Consensus 77 ygsyl~g~~LwiiMey~~gGsv~~lL~~~~--~~~E~~i~~ilre~l~~l~ylH---~~~kiHrDIKaanil~s~~g~vk 151 (467)
T KOG0201|consen 77 YGSYLKGTKLWIIMEYCGGGSVLDLLKSGN--ILDEFEIAVILREVLKGLDYLH---SEKKIHRDIKAANILLSESGDVK 151 (467)
T ss_pred hhheeecccHHHHHHHhcCcchhhhhccCC--CCccceeeeehHHHHHHhhhhh---hcceecccccccceeEeccCcEE
Confidence 999999999999999999999999998742 3366666778889999999999 89999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKM 867 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 867 (947)
++|||.+..+....... ..++||+.|||||+++...|+.|+||||+|++.+||++|.+|+.. .
T Consensus 152 l~DfgVa~ql~~~~~rr--~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~---------------~ 214 (467)
T KOG0201|consen 152 LADFGVAGQLTNTVKRR--KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSK---------------L 214 (467)
T ss_pred EEecceeeeeechhhcc--ccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcc---------------c
Confidence 99999998776554332 467899999999999988999999999999999999999999732 2
Q ss_pred cccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH--hhccCCC
Q 002250 868 DSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM--LEEAEPC 923 (947)
Q Consensus 868 ~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~--L~~~~~~ 923 (947)
+....+.-+-....+.......+.+.+++..|+++||+.||++.+++++ ++...++
T Consensus 215 hPmrvlflIpk~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~a~k~ 272 (467)
T KOG0201|consen 215 HPMRVLFLIPKSAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKRAKKT 272 (467)
T ss_pred CcceEEEeccCCCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHhcCCc
Confidence 2222222222223333444556678899999999999999999999853 4554433
No 34
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-40 Score=353.45 Aligned_cols=388 Identities=19% Similarity=0.189 Sum_probs=230.6
Q ss_pred ccEEeCcCccCcCCCCC-ccc-c-cccceeecCCCCccCccCcccccccCCCceeeCCCCCCCCCCCChhhcccccCcEE
Q 002250 87 LQVLDLGNNSFSGEVPD-LSM-L-HELSFLNLNSSGISGKFPWKSLENLTNLEFLSLGDNPFDPSPFPMEVLKLEKLYWL 163 (947)
Q Consensus 87 L~~L~Ls~n~i~~~~~~-l~~-l-~~L~~L~L~~n~i~~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~~l~~L~~L 163 (947)
-+.||.+.+.+...... +.. | ..-+.||+++|+++..-+ ..|.++++|++++|.+|.++. +|........|+.|
T Consensus 54 ~~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~-~~f~nl~nLq~v~l~~N~Lt~--IP~f~~~sghl~~L 130 (873)
T KOG4194|consen 54 TRLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDF-EFFYNLPNLQEVNLNKNELTR--IPRFGHESGHLEKL 130 (873)
T ss_pred ceeeecCccccccccccccCCcCccceeeeeccccccccCcH-HHHhcCCcceeeeeccchhhh--cccccccccceeEE
Confidence 34577777777643111 111 1 233456667666664322 456666666666666666654 34444444456666
Q ss_pred EccCccccccCCccCCCCCCCCEEECcCcccccccCccccCCCCCcEEEeecccccccCCccCCCCCCccEEeccCCCCC
Q 002250 164 YLTNCSVTGQIPEGIGNLTQLQNLELSDNELFGEIPAGIVKLNKLWQLELYNNSLSGRLPVGFSNLTNLMNFDVSQNRLE 243 (947)
Q Consensus 164 ~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 243 (947)
+|.+|.|+.+-.+.++.++.|+.||||.|.|+.+.-..|..-.++++|+|++|+|+......|..+.+|..|.|+.|+++
T Consensus 131 ~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrit 210 (873)
T KOG4194|consen 131 DLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRIT 210 (873)
T ss_pred eeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCccc
Confidence 66666666555566666666666666666665444445555555666666666666555566666666666666666666
Q ss_pred CCCc-cccccCCCCEEEccCccCcccCCCCccCCCcCcEEEccCccccccCCcCccCcccccccccccccccCCCCCCcc
Q 002250 244 GDLS-ELRFLNQLSSLHLFENQFSGEIPEEFGEFKHLTELSLYTNRLTGTLPQKLGSWADFNYVDVSENLLTGPIPPDMC 322 (947)
Q Consensus 244 ~~~~-~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~ 322 (947)
.++. .|+.+++|+.|+|..|+|.-.---.|.++++|+.|.|..|.+...-...|..+.++++|+|+.|+++.
T Consensus 211 tLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~------- 283 (873)
T KOG4194|consen 211 TLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQA------- 283 (873)
T ss_pred ccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhh-------
Confidence 5554 34556666666666666652224455666666666666666654444455555555555555555553
Q ss_pred cCCccceeeecccccCCcCCccccCCCCccEEEcccccccccCCCCCCCCCCcceeccccCCcCCCCCCcccccccccEE
Q 002250 323 KTGAMTDLLVLQNNFNGTVPETYANCKSLIRFRVNNNSLSGTIPPGIWSLPNLSIIDLSTNQFEGPVTDDIGNAKSLALL 402 (947)
Q Consensus 323 ~~~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 402 (947)
.-..++-++++|+.|+|++|.|..+.++.+.-.++|++||||+|+|+...+..|..+..|+.|
T Consensus 284 -----------------vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~L 346 (873)
T KOG4194|consen 284 -----------------VNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEEL 346 (873)
T ss_pred -----------------hhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhh
Confidence 233445556666666666666666656655556666666666666666666666666666666
Q ss_pred EccCccccccCCCCCCCCCcceEEEcccCcccCCCCc---ccccccccchhhccccccCCCCCcccccccccceeeccCc
Q 002250 403 LLANNRFSGELPSKISEASSLVSIQLSLNQFSGQIPL---DIGKLKKLSSLYLHDNMFSGPLPYSIGSCVSLTDINFAQN 479 (947)
Q Consensus 403 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~---~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 479 (947)
+|++|++...-...|..+++|+.|||++|.|...+.+ .|.+|++|+.|.|.+|+|..+...+|.++.+|++|||.+|
T Consensus 347 nLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~N 426 (873)
T KOG4194|consen 347 NLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDN 426 (873)
T ss_pred cccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCC
Confidence 6666666655555566666666666666666654432 3555666666666666666555566666666666666666
Q ss_pred eeeeecCCCCCccCcCcEEECCC
Q 002250 480 SLSGKIPDSLGSLPSLNSLNLSN 502 (947)
Q Consensus 480 ~l~~~~p~~~~~l~~L~~L~Ls~ 502 (947)
.|..+-|++|..+ .|+.|.++.
T Consensus 427 aiaSIq~nAFe~m-~Lk~Lv~nS 448 (873)
T KOG4194|consen 427 AIASIQPNAFEPM-ELKELVMNS 448 (873)
T ss_pred cceeecccccccc-hhhhhhhcc
Confidence 6666666666666 666665443
No 35
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-38 Score=331.70 Aligned_cols=265 Identities=28% Similarity=0.391 Sum_probs=204.0
Q ss_pred hccCCcccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHh--hccccccce
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLS--AVRHVNVVK 706 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~--~l~h~niv~ 706 (947)
+.....+.||+|.||.||||++. ++.||||++. ..+.+.|+.|-.|.+ .++|+||++
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp--------------------~~~kqs~~~Ek~Iy~lp~m~h~nIl~ 268 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFP--------------------EQEKQSFQNEKNIYSLPGMKHENILQ 268 (534)
T ss_pred CchhhHHHhhcCccceeehhhcc-CceeEEEecC--------------------HHHHHHHHhHHHHHhccCccchhHHH
Confidence 45566788999999999999998 5999999983 234556666666655 668999999
Q ss_pred EEEEEecCC----ccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcC------CCCCeEeccCCCC
Q 002250 707 LYCSITSED----SNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHG------FDRPVIHRDVKSS 776 (947)
Q Consensus 707 l~~~~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~------~~~~ivH~Dlkp~ 776 (947)
|+++-.... .+++|+||.+.|+|.+|++. ...+|....+|+..+++||+|||+. +.++|+|||||++
T Consensus 269 Fi~~ekr~t~~~~eywLVt~fh~kGsL~dyL~~---ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSk 345 (534)
T KOG3653|consen 269 FIGAEKRGTADRMEYWLVTEFHPKGSLCDYLKA---NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSK 345 (534)
T ss_pred hhchhccCCccccceeEEeeeccCCcHHHHHHh---ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCcccccccccc
Confidence 999877766 78999999999999999997 5789999999999999999999953 4678999999999
Q ss_pred CeEecCCCCeEEeccccceecccCCCCcceecccccccccCccccccCCC------CCccchHHHHHHHHHHHhCCCCCC
Q 002250 777 NILLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKI------NEKSDVYSFGVVLMELVTGKRPIV 850 (947)
Q Consensus 777 NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~------~~~~Dv~slGv~l~elltg~~p~~ 850 (947)
|||+..|+++.|+|||+|..+..+.........+||.+|||||++.+..- -.+.||||+|.|+|||++....++
T Consensus 346 NVLvK~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~ 425 (534)
T KOG3653|consen 346 NVLVKNDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDAD 425 (534)
T ss_pred ceEEccCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 99999999999999999998887766555556899999999999976432 236899999999999999766543
Q ss_pred C--------CC----CCcccHHHHHHhhccccccccccccCCCCccCH--HHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 851 P--------EF----GDSKDIVNWVYSKMDSRDSMLTVVDPNISEILK--EDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 851 ~--------~~----~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~--~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
+ .| +....+.++-.-.++ +...|.+++... ..+..+.+.+..||+.||+.|.|+.=|-+.
T Consensus 426 ~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~------kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR 499 (534)
T KOG3653|consen 426 PGPVPEYQLPFEAEVGNHPTLEEMQELVVR------KKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEER 499 (534)
T ss_pred CCCCCcccCchhHHhcCCCCHHHHHHHHHh------hccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHH
Confidence 2 11 111122111111111 111122322211 345568889999999999999999988888
Q ss_pred hhccCCC
Q 002250 917 LEEAEPC 923 (947)
Q Consensus 917 L~~~~~~ 923 (947)
+.++.-.
T Consensus 500 ~~~l~~~ 506 (534)
T KOG3653|consen 500 MAELMML 506 (534)
T ss_pred HHHHhcc
Confidence 8776533
No 36
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-38 Score=345.53 Aligned_cols=254 Identities=23% Similarity=0.316 Sum_probs=205.9
Q ss_pred HhhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcc-cccc
Q 002250 627 IIDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVR-HVNV 704 (947)
Q Consensus 627 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~ni 704 (947)
..+.|.+.+.||+|+||+|+.|... +++.||||++...... ... ....+.+.+|+.++++++ ||||
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~-----------~~~-~~~~~~i~rEi~~~~~~~~HpnI 82 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVS-----------SKS-QKLDELIKREISILRRLRSHPNI 82 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhccc-----------ccc-cccchhhHHHHHHHHHhccCCCE
Confidence 3578999999999999999999854 7899999976322100 001 123455668999999999 9999
Q ss_pred ceEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCC-
Q 002250 705 VKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLE- 783 (947)
Q Consensus 705 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~- 783 (947)
+++++++......|+||||+.||+|.+++... .++.+.....++.|++.|++|+| +++|+||||||+||+++.+
T Consensus 83 ~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~~--g~l~E~~ar~~F~Qlisav~y~H---~~gi~HRDLK~ENilld~~~ 157 (370)
T KOG0583|consen 83 IRLLEVFATPTKIYIVMEYCSGGDLFDYIVNK--GRLKEDEARKYFRQLISAVAYCH---SRGIVHRDLKPENILLDGNE 157 (370)
T ss_pred eEEEEEEecCCeEEEEEEecCCccHHHHHHHc--CCCChHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEecCCC
Confidence 99999999999999999999999999999983 45777888999999999999999 9999999999999999999
Q ss_pred CCeEEeccccceecccCCCCcceecccccccccCccccccCC-CC-CccchHHHHHHHHHHHhCCCCCCCCCCCcccHHH
Q 002250 784 WKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCK-IN-EKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVN 861 (947)
Q Consensus 784 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~ 861 (947)
+++||+|||++.... .........+||+.|+|||++.+.. |+ .++||||+||++|.|++|+.||.. .+...
T Consensus 158 ~~~Kl~DFG~s~~~~--~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d-----~~~~~ 230 (370)
T KOG0583|consen 158 GNLKLSDFGLSAISP--GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDD-----SNVPN 230 (370)
T ss_pred CCEEEeccccccccC--CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCC-----ccHHH
Confidence 999999999998774 1222344678999999999999877 76 789999999999999999999953 34444
Q ss_pred HHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 002250 862 WVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVV 914 (947)
Q Consensus 862 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~ 914 (947)
........... ++.... ..++..++.+|+..+|.+|+|+.+++
T Consensus 231 l~~ki~~~~~~--------~p~~~~--S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 231 LYRKIRKGEFK--------IPSYLL--SPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred HHHHHhcCCcc--------CCCCcC--CHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 33332222222 122221 56788899999999999999999999
No 37
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=6.1e-38 Score=343.41 Aligned_cols=264 Identities=22% Similarity=0.311 Sum_probs=201.6
Q ss_pred hccCCcccccccCceeEEEEEeCC-----------------CcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHH
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLNS-----------------GKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDA 691 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (947)
++|++.+.||+|+||.||+|..++ +..||||++.+.. .......+.+
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~----------------~~~~~~~~~~ 68 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA----------------NKNARNDFLK 68 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC----------------CHHHHHHHHH
Confidence 578889999999999999998542 3369999874211 1122356889
Q ss_pred HHHHHhhccccccceEEEEEecCCccEEEEeccCCCChHHHhhhcC-----------------CccCCHHHHHHHHHHHH
Q 002250 692 EVATLSAVRHVNVVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCH-----------------KIEMDWVVRYAIAVGAA 754 (947)
Q Consensus 692 E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-----------------~~~~~~~~~~~i~~~ia 754 (947)
|++++++++||||+++++++...+..++||||+++|+|.+++.... ...+++....+++.|++
T Consensus 69 E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~ 148 (304)
T cd05096 69 EVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIA 148 (304)
T ss_pred HHHHHhhcCCCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999986531 12467888999999999
Q ss_pred HHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHH
Q 002250 755 KGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYS 834 (947)
Q Consensus 755 ~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s 834 (947)
.||+||| +.+|+||||||+||+++.++.+||+|||+++...............++..|+|||++..+.++.++||||
T Consensus 149 ~al~~lH---~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s 225 (304)
T cd05096 149 SGMKYLS---SLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWA 225 (304)
T ss_pred HHHHHHH---HCCccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHH
Confidence 9999999 8999999999999999999999999999998654433222222334578999999998889999999999
Q ss_pred HHHHHHHHHh--CCCCCCCCCCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHH
Q 002250 835 FGVVLMELVT--GKRPIVPEFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRV 912 (947)
Q Consensus 835 lGv~l~ellt--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~e 912 (947)
||+++|||++ +..||... .................. ... ...+..++..+.+++.+||+.||++|||+.|
T Consensus 226 lG~~l~el~~~~~~~p~~~~--~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~ 297 (304)
T cd05096 226 FGVTLWEILMLCKEQPYGEL--TDEQVIENAGEFFRDQGR--QVY----LFRPPPCPQGLYELMLQCWSRDCRERPSFSD 297 (304)
T ss_pred HHHHHHHHHHccCCCCCCcC--CHHHHHHHHHHHhhhccc--ccc----ccCCCCCCHHHHHHHHHHccCCchhCcCHHH
Confidence 9999999997 45566322 122222222111111110 000 0111233457899999999999999999999
Q ss_pred HHHHhhc
Q 002250 913 VVQMLEE 919 (947)
Q Consensus 913 v~~~L~~ 919 (947)
|.+.|++
T Consensus 298 i~~~l~~ 304 (304)
T cd05096 298 IHAFLTE 304 (304)
T ss_pred HHHHHhC
Confidence 9998864
No 38
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.2e-38 Score=341.99 Aligned_cols=252 Identities=26% Similarity=0.350 Sum_probs=213.8
Q ss_pred hhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccce
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVK 706 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 706 (947)
.+.|+.++.||.|+.|.|-.|++. +|+.+|||++.... .........+++|+-+|+.+.||||++
T Consensus 11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~--------------~~s~s~~~~IerEIviMkLi~HpnVl~ 76 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRS--------------ELSSSQPAGIEREIVIMKLIEHPNVLR 76 (786)
T ss_pred ccceeccccccCCCCceehhhhcccccceeEEEeecccc--------------ccccccccchhhhhHHHHHhcCCCeee
Confidence 467899999999999999999954 89999999994321 112234567889999999999999999
Q ss_pred EEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCe
Q 002250 707 LYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKP 786 (947)
Q Consensus 707 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 786 (947)
+|+++++..++|+|.||+++|.|++++-..+ ++++....+++.||+.|+.|+| ..+|+|||+||+|+|+|..+++
T Consensus 77 LydVwe~~~~lylvlEyv~gGELFdylv~kG--~l~e~eaa~ff~QIi~gv~yCH---~~~icHRDLKpENlLLd~~~nI 151 (786)
T KOG0588|consen 77 LYDVWENKQHLYLVLEYVPGGELFDYLVRKG--PLPEREAAHFFRQILDGVSYCH---AFNICHRDLKPENLLLDVKNNI 151 (786)
T ss_pred eeeeeccCceEEEEEEecCCchhHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHh---hhcceeccCCchhhhhhcccCE
Confidence 9999999999999999999999999998754 4777778889999999999999 8999999999999999999999
Q ss_pred EEeccccceecccCCCCcceecccccccccCccccccCCCC-CccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHh
Q 002250 787 RIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKIN-EKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYS 865 (947)
Q Consensus 787 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~ 865 (947)
||+|||+|..-.++.-. ...+|.+.|.|||++.+..|+ .++||||.|||+|-++||+.||+ ++++...+.+
T Consensus 152 KIADFGMAsLe~~gklL---eTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFd-----DdNir~LLlK 223 (786)
T KOG0588|consen 152 KIADFGMASLEVPGKLL---ETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFD-----DDNIRVLLLK 223 (786)
T ss_pred eeeccceeecccCCccc---cccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCC-----CccHHHHHHH
Confidence 99999999876555432 245899999999999999886 78999999999999999999994 5566655555
Q ss_pred hccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 002250 866 KMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQML 917 (947)
Q Consensus 866 ~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L 917 (947)
..++... ++...+.+..+++.+|+..||++|.|++||.++-
T Consensus 224 V~~G~f~-----------MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP 264 (786)
T KOG0588|consen 224 VQRGVFE-----------MPSNISSEAQDLLRRMLDVDPSTRITTEEILKHP 264 (786)
T ss_pred HHcCccc-----------CCCcCCHHHHHHHHHHhccCccccccHHHHhhCc
Confidence 4444443 3345556788899999999999999999999863
No 39
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=5.4e-38 Score=352.75 Aligned_cols=259 Identities=24% Similarity=0.368 Sum_probs=202.7
Q ss_pred hhccCCcccccccCceeEEEEEe------CCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-c
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVL------NSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-R 700 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~ 700 (947)
.++|++.+.||+|+||.||+|.. .++..||||++.+.. .....+.+.+|+++++.+ +
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~----------------~~~~~~~~~~Ei~il~~l~~ 97 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSA----------------HLTEREALMSELKVLSYLGN 97 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCc----------------CcHHHHHHHHHHHHHHHhcC
Confidence 35789999999999999999973 235689999884221 112345688999999999 8
Q ss_pred ccccceEEEEEecCCccEEEEeccCCCChHHHhhhcC-------------------------------------------
Q 002250 701 HVNVVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCH------------------------------------------- 737 (947)
Q Consensus 701 h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~------------------------------------------- 737 (947)
||||+++++++..++..++||||+++|+|.++++...
T Consensus 98 HpnIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 177 (375)
T cd05104 98 HINIVNLLGACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSY 177 (375)
T ss_pred CcceeeeeeeeccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccc
Confidence 9999999999999999999999999999999986432
Q ss_pred ------------------------------CccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 738 ------------------------------KIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 738 ------------------------------~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
...+++..+.+++.||+.||+||| +.+|+||||||+||+++.++.+|
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nill~~~~~~k 254 (375)
T cd05104 178 VVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLA---SKNCIHRDLAARNILLTHGRITK 254 (375)
T ss_pred ccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCchhhEEEECCCcEE
Confidence 124788899999999999999999 89999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHhh
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNWVYSK 866 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~ 866 (947)
|+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||..... ...+......
T Consensus 255 l~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~-~~~~~~~~~~- 332 (375)
T cd05104 255 ICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPV-DSKFYKMIKE- 332 (375)
T ss_pred EecCccceeccCcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCc-hHHHHHHHHh-
Confidence 999999986644322211222335678999999999999999999999999999998 8888743211 1122222111
Q ss_pred ccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhc
Q 002250 867 MDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEE 919 (947)
Q Consensus 867 ~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~ 919 (947)
... ...+...+.++.+++.+||+.||++||+|.|++++|++
T Consensus 333 ---~~~---------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 333 ---GYR---------MLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred ---Ccc---------CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 100 00111224568899999999999999999999999986
No 40
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-38 Score=327.34 Aligned_cols=272 Identities=23% Similarity=0.247 Sum_probs=205.7
Q ss_pred HHHhhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccc
Q 002250 625 KEIIDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVN 703 (947)
Q Consensus 625 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n 703 (947)
....+.|++.+.||+|.||.|-+|+.. +++.||||++............ ...+......+...+||.+|+++.|||
T Consensus 93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~---~~~a~~~~~~ekv~~EIailKkl~H~n 169 (576)
T KOG0585|consen 93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFP---RQPAMKLMPIEKVRREIAILKKLHHPN 169 (576)
T ss_pred ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccc---cccccccCcHHHHHHHHHHHHhcCCcC
Confidence 445688999999999999999999954 7999999999643321111110 011222334568899999999999999
Q ss_pred cceEEEEEecC--CccEEEEeccCCCChHHHhhhcCCcc-CCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEe
Q 002250 704 VVKLYCSITSE--DSNLLVYEYLPNGSLWDRLHTCHKIE-MDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILL 780 (947)
Q Consensus 704 iv~l~~~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~-~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll 780 (947)
||+++++..++ +..|||+||+..|.+...=. ..+ ++..+.+++..+++.||+||| .++||||||||+|+|+
T Consensus 170 VV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~---d~~els~~~Ar~ylrDvv~GLEYLH---~QgiiHRDIKPsNLLl 243 (576)
T KOG0585|consen 170 VVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPP---DKPELSEQQARKYLRDVVLGLEYLH---YQGIIHRDIKPSNLLL 243 (576)
T ss_pred eeEEEEeecCcccCceEEEEEeccCCccccCCC---CcccccHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheEE
Confidence 99999999874 56799999999887643222 233 888999999999999999999 8999999999999999
Q ss_pred cCCCCeEEeccccceecccCC---CCcceecccccccccCccccccCC----CCCccchHHHHHHHHHHHhCCCCCCCCC
Q 002250 781 DLEWKPRIADFGLAKIVQTGE---AGDLTHVIAGTHGYIAPEYAYTCK----INEKSDVYSFGVVLMELVTGKRPIVPEF 853 (947)
Q Consensus 781 ~~~~~~kl~DfG~a~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~Dv~slGv~l~elltg~~p~~~~~ 853 (947)
+++|.+||+|||.+.....+. .+......+|||.|+|||...++. .+.+.||||+||++|.|+.|+.||.+++
T Consensus 244 ~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~ 323 (576)
T KOG0585|consen 244 SSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDF 323 (576)
T ss_pred cCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccch
Confidence 999999999999997663331 122233468999999999987743 3467899999999999999999996432
Q ss_pred CCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhc
Q 002250 854 GDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEE 919 (947)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~ 919 (947)
..+...+.....-. .+..++..+.+.+++.+++.+||+.|.+..+|..+..-
T Consensus 324 -----~~~l~~KIvn~pL~---------fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwv 375 (576)
T KOG0585|consen 324 -----ELELFDKIVNDPLE---------FPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWV 375 (576)
T ss_pred -----HHHHHHHHhcCccc---------CCCcccccHHHHHHHHHHhhcChhheeehhhheeccee
Confidence 22222222211111 11222456678899999999999999999999877653
No 41
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=1.8e-37 Score=335.07 Aligned_cols=250 Identities=22% Similarity=0.286 Sum_probs=197.7
Q ss_pred ccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEEEEec-
Q 002250 635 NLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYCSITS- 713 (947)
Q Consensus 635 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 713 (947)
..||+|++|.||+|... |+.||||++..... ......+.+.+|+.++++++||||++++|++.+
T Consensus 26 ~~i~~g~~~~v~~~~~~-~~~vavK~~~~~~~--------------~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~ 90 (283)
T PHA02988 26 VLIKENDQNSIYKGIFN-NKEVIIRTFKKFHK--------------GHKVLIDITENEIKNLRRIDSNNILKIYGFIIDI 90 (283)
T ss_pred eEEeeCCceEEEEEEEC-CEEEEEEecccccc--------------ccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEec
Confidence 57899999999999985 89999999842110 001113668899999999999999999999876
Q ss_pred ---CCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEec
Q 002250 714 ---EDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIAD 790 (947)
Q Consensus 714 ---~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 790 (947)
....++||||+++|+|.+++... ..+++.....++.+++.|++|||. ..+++||||||+||++++++.+||+|
T Consensus 91 ~~~~~~~~lv~Ey~~~g~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lH~--~~~~~Hrdlkp~nill~~~~~~kl~d 166 (283)
T PHA02988 91 VDDLPRLSLILEYCTRGYLREVLDKE--KDLSFKTKLDMAIDCCKGLYNLYK--YTNKPYKNLTSVSFLVTENYKLKIIC 166 (283)
T ss_pred ccCCCceEEEEEeCCCCcHHHHHhhC--CCCChhHHHHHHHHHHHHHHHHHh--cCCCCCCcCChhhEEECCCCcEEEcc
Confidence 34678999999999999999864 458899999999999999999993 24888999999999999999999999
Q ss_pred cccceecccCCCCcceecccccccccCcccccc--CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcc
Q 002250 791 FGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYT--CKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMD 868 (947)
Q Consensus 791 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 868 (947)
||+++...... ....|+..|+|||++.+ ..++.++|||||||++|||++|+.||... ...+.......
T Consensus 167 fg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~-----~~~~~~~~i~~ 236 (283)
T PHA02988 167 HGLEKILSSPP-----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENL-----TTKEIYDLIIN 236 (283)
T ss_pred cchHhhhcccc-----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCC-----CHHHHHHHHHh
Confidence 99997654322 13457899999999976 67999999999999999999999999532 11122111111
Q ss_pred ccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCC
Q 002250 869 SRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAEP 922 (947)
Q Consensus 869 ~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 922 (947)
.... ...+...+..+.+++.+||+.||++|||+.|+++.|+.+..
T Consensus 237 ~~~~---------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 237 KNNS---------LKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred cCCC---------CCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 1111 11122345678899999999999999999999999988654
No 42
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=4.8e-38 Score=352.78 Aligned_cols=260 Identities=24% Similarity=0.346 Sum_probs=202.6
Q ss_pred hhccCCcccccccCceeEEEEEeC------CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-c
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLN------SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-R 700 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~ 700 (947)
.++|++.+.||+|+||.||+|+.. ++..||||++.... .......+.+|+++++++ +
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~----------------~~~~~~~~~~E~~il~~l~~ 100 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASA----------------HTDEREALMSELKILSHLGQ 100 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCC----------------CHHHHHHHHHHHHHHHhhcc
Confidence 367899999999999999998842 24579999984211 112245688999999999 8
Q ss_pred ccccceEEEEEecCCccEEEEeccCCCChHHHhhhcC-------------------------------------------
Q 002250 701 HVNVVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCH------------------------------------------- 737 (947)
Q Consensus 701 h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~------------------------------------------- 737 (947)
|+||+++++++...+..++||||+++|+|.+++....
T Consensus 101 h~nIv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (374)
T cd05106 101 HKNIVNLLGACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDT 180 (374)
T ss_pred CCceeeEeeEecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhccccccccccccccccc
Confidence 9999999999999999999999999999999986421
Q ss_pred -------------------------CccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEeccc
Q 002250 738 -------------------------KIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFG 792 (947)
Q Consensus 738 -------------------------~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 792 (947)
..++++....+++.|++.||+||| +++|+||||||+||++++++.+||+|||
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~giiHrDLkp~Nil~~~~~~~kL~DfG 257 (374)
T cd05106 181 YVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLA---SKNCIHRDVAARNVLLTDGRVAKICDFG 257 (374)
T ss_pred ccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCEEeccCchheEEEeCCCeEEEeece
Confidence 124788889999999999999999 8999999999999999999999999999
Q ss_pred cceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhccccc
Q 002250 793 LAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNWVYSKMDSRD 871 (947)
Q Consensus 793 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 871 (947)
+++...............++..|+|||++....++.++|||||||++|||++ |+.||...... ...... .....
T Consensus 258 la~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~-~~~~~~----~~~~~ 332 (374)
T cd05106 258 LARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVN-SKFYKM----VKRGY 332 (374)
T ss_pred eeeeccCCcceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCcccccc-HHHHHH----HHccc
Confidence 9976543322211222335678999999998899999999999999999997 99998543211 111111 11110
Q ss_pred cccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 002250 872 SMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEA 920 (947)
Q Consensus 872 ~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 920 (947)
....+ ...+..+.+++.+||+.||++|||+.+++++|+++
T Consensus 333 ------~~~~~---~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~ 372 (374)
T cd05106 333 ------QMSRP---DFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQ 372 (374)
T ss_pred ------CccCC---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 00111 11245688999999999999999999999999875
No 43
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.5e-37 Score=336.80 Aligned_cols=258 Identities=26% Similarity=0.416 Sum_probs=207.7
Q ss_pred hccCCcccccccCceeEEEEEeCC------CcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcccc
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLNS------GKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHV 702 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 702 (947)
++|++.+.||+|+||.||+|.... ...||+|.+.... .......+.+|+.++++++||
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~----------------~~~~~~~~~~ei~~l~~l~h~ 68 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA----------------EPKVQQEFRQEAELMSDLQHP 68 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC----------------CHHHHHHHHHHHHHHHhcCCc
Confidence 578899999999999999998542 2579999873211 112235688999999999999
Q ss_pred ccceEEEEEecCCccEEEEeccCCCChHHHhhhcCC--------------ccCCHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 002250 703 NVVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHK--------------IEMDWVVRYAIAVGAAKGLEYLHHGFDRPV 768 (947)
Q Consensus 703 niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--------------~~~~~~~~~~i~~~ia~~l~yLH~~~~~~i 768 (947)
||+++++++...+..+++|||+++++|.+++..... ..+++.....++.|++.||+||| +.++
T Consensus 69 ~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH---~~~i 145 (283)
T cd05048 69 NIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLS---SHHF 145 (283)
T ss_pred ccceEEEEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCe
Confidence 999999999999999999999999999999976422 45788899999999999999999 8999
Q ss_pred EeccCCCCCeEecCCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCC
Q 002250 769 IHRDVKSSNILLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKR 847 (947)
Q Consensus 769 vH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~ 847 (947)
+||||||+||++++++.++|+|||+++...............+++.|+|||++.++.++.++|||||||++|||++ |..
T Consensus 146 ~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~ 225 (283)
T cd05048 146 VHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQ 225 (283)
T ss_pred eccccccceEEEcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCC
Confidence 9999999999999999999999999986644433222334456889999999998899999999999999999998 999
Q ss_pred CCCCCCCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 002250 848 PIVPEFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEA 920 (947)
Q Consensus 848 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 920 (947)
||.... ..++...+. . ......+...+..+.+++.+||+.||++||++.||+++|+++
T Consensus 226 p~~~~~--~~~~~~~i~----~---------~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 226 PYYGFS--NQEVIEMIR----S---------RQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred CCCCCC--HHHHHHHHH----c---------CCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 985321 122222111 1 111223445567899999999999999999999999999864
No 44
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1.2e-37 Score=337.49 Aligned_cols=253 Identities=26% Similarity=0.273 Sum_probs=200.3
Q ss_pred cCCcccccccCceeEEEEEe-CCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEE
Q 002250 631 VKPENLIGKGGSGNVYKVVL-NSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYC 709 (947)
Q Consensus 631 ~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 709 (947)
|+..+.||+|+||+||+|.. .+++.||||.+.... .........+.+|+.++++++|+||+++++
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~--------------~~~~~~~~~~~~E~~il~~l~~~~iv~~~~ 67 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKR--------------IKKRKGEAMALNEKRILEKVNSRFVVSLAY 67 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhh--------------hhhhhhHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 66778999999999999995 479999999883211 011122345778999999999999999999
Q ss_pred EEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEe
Q 002250 710 SITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIA 789 (947)
Q Consensus 710 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 789 (947)
++.+++..++||||+++|+|.+++.......+++..+..++.|++.|++||| +.+|+||||||+||++++++.++|+
T Consensus 68 ~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nill~~~~~~kl~ 144 (285)
T cd05631 68 AYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQ---RERIVYRDLKPENILLDDRGHIRIS 144 (285)
T ss_pred EEccCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEe
Confidence 9999999999999999999999887655556899999999999999999999 8999999999999999999999999
Q ss_pred ccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhccc
Q 002250 790 DFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDS 869 (947)
Q Consensus 790 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 869 (947)
|||++........ .....||..|+|||++.+..++.++|||||||++|||++|+.||...... ...+........
T Consensus 145 Dfg~~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~--~~~~~~~~~~~~ 219 (285)
T cd05631 145 DLGLAVQIPEGET---VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKER--VKREEVDRRVKE 219 (285)
T ss_pred eCCCcEEcCCCCe---ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcc--hhHHHHHHHhhc
Confidence 9999986543321 22346899999999999999999999999999999999999999643211 011111111100
Q ss_pred cccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHH
Q 002250 870 RDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPS-----MRVVVQ 915 (947)
Q Consensus 870 ~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~ev~~ 915 (947)
.......+....+.+++.+|++.||++||+ ++++++
T Consensus 220 ----------~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 220 ----------DQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred ----------ccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 001122233456788999999999999997 777775
No 45
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1.8e-37 Score=332.68 Aligned_cols=256 Identities=21% Similarity=0.309 Sum_probs=202.3
Q ss_pred hccCCcccccccCceeEEEEEeC----CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcccccc
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN----SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNV 704 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 704 (947)
++|++.+.||+|+||.||+|.++ .+..||+|++.... .......+.+|+.++++++||||
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~----------------~~~~~~~~~~e~~~l~~l~h~~i 68 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC----------------SDKQRRGFLAEALTLGQFDHSNI 68 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC----------------CHHHHHHHHHHHHHHhcCCCCCc
Confidence 56888999999999999999853 35689999884211 11223568899999999999999
Q ss_pred ceEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCC
Q 002250 705 VKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEW 784 (947)
Q Consensus 705 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~ 784 (947)
+++++++..++..++||||+++|+|.+++... ...+++..++.++.|++.|++||| +.+++||||||+||+++.++
T Consensus 69 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~i~~al~~lH---~~~iiH~dikp~nili~~~~ 144 (266)
T cd05064 69 VRLEGVITRGNTMMIVTEYMSNGALDSFLRKH-EGQLVAGQLMGMLPGLASGMKYLS---EMGYVHKGLAAHKVLVNSDL 144 (266)
T ss_pred CeEEEEEecCCCcEEEEEeCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHH---HCCEeeccccHhhEEEcCCC
Confidence 99999999999999999999999999999864 246889999999999999999999 89999999999999999999
Q ss_pred CeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHH
Q 002250 785 KPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNWV 863 (947)
Q Consensus 785 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~ 863 (947)
.++++|||.+......... ......++..|+|||++.+..++.++|||||||++||+++ |+.||.... ..+....
T Consensus 145 ~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~--~~~~~~~- 220 (266)
T cd05064 145 VCKISGFRRLQEDKSEAIY-TTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMS--GQDVIKA- 220 (266)
T ss_pred cEEECCCcccccccccchh-cccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCC--HHHHHHH-
Confidence 9999999987653222111 1112235678999999999999999999999999999875 999985321 1111111
Q ss_pred HhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 002250 864 YSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEA 920 (947)
Q Consensus 864 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 920 (947)
. ... ...+.+...+..+.+++.+||+.+|++||++.++.+.|++.
T Consensus 221 --~-~~~---------~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 221 --V-EDG---------FRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred --H-HCC---------CCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 1 111 11112334556788999999999999999999999998764
No 46
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=8.3e-38 Score=334.22 Aligned_cols=254 Identities=22% Similarity=0.334 Sum_probs=217.5
Q ss_pred cCCcccccccCceeEEEEEeCC---Cc--EEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccc
Q 002250 631 VKPENLIGKGGSGNVYKVVLNS---GK--ELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVV 705 (947)
Q Consensus 631 ~~~~~~iG~G~~g~Vy~~~~~~---~~--~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 705 (947)
....++||+|.||.||+|...+ |+ .||||.-+.+ ......+.|..|+.+|++++|||||
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d----------------~t~d~tekflqEa~iMrnfdHphIi 454 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTD----------------CTPDDTEKFLQEASIMRNFDHPHII 454 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccC----------------CChhhHHHHHHHHHHHHhCCCcchh
Confidence 4456889999999999999543 33 4888876321 1234467899999999999999999
Q ss_pred eEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCC
Q 002250 706 KLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWK 785 (947)
Q Consensus 706 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~ 785 (947)
+++|.|.+ ...+||||.++-|.|..+++.. ...++......++.|+..||+||| +.++|||||.++|||+.....
T Consensus 455 kLIGv~~e-~P~WivmEL~~~GELr~yLq~n-k~sL~l~tL~ly~~Qi~talaYLe---SkrfVHRDIAaRNiLVsSp~C 529 (974)
T KOG4257|consen 455 KLIGVCVE-QPMWIVMELAPLGELREYLQQN-KDSLPLRTLTLYCYQICTALAYLE---SKRFVHRDIAARNILVSSPQC 529 (974)
T ss_pred heeeeeec-cceeEEEecccchhHHHHHHhc-cccchHHHHHHHHHHHHHHHHHHH---hhchhhhhhhhhheeecCcce
Confidence 99999987 4679999999999999999974 456888899999999999999999 999999999999999999999
Q ss_pred eEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHH
Q 002250 786 PRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNWVY 864 (947)
Q Consensus 786 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~ 864 (947)
+|++|||+++.+....+...+ ...-...|||||.+.-.+++.++|||.|||.+||++. |..||.+
T Consensus 530 VKLaDFGLSR~~ed~~yYkaS-~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqg------------- 595 (974)
T KOG4257|consen 530 VKLADFGLSRYLEDDAYYKAS-RGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQG------------- 595 (974)
T ss_pred eeecccchhhhccccchhhcc-ccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccc-------------
Confidence 999999999998877765554 3345678999999999999999999999999999998 9999853
Q ss_pred hhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccC
Q 002250 865 SKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAE 921 (947)
Q Consensus 865 ~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~ 921 (947)
+...+.+..+..+...+.++.|++.++.+|.+||.++|.+||++.|+...|.++.
T Consensus 596 --vkNsDVI~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~ 650 (974)
T KOG4257|consen 596 --VKNSDVIGHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVL 650 (974)
T ss_pred --ccccceEEEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHH
Confidence 3444555666667778889999999999999999999999999999998887643
No 47
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-37 Score=339.94 Aligned_cols=245 Identities=24% Similarity=0.358 Sum_probs=199.3
Q ss_pred hhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-cccccc
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-RHVNVV 705 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv 705 (947)
.++|.....||+|+||+|++|..+ +++.+|||+++.+..-. ..+.+..+.|.+|+... +||.++
T Consensus 367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~--------------~d~Ve~~~~EkrI~~la~~HPFL~ 432 (694)
T KOG0694|consen 367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQ--------------RDEVESLMCEKRIFELANRHPFLV 432 (694)
T ss_pred ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceec--------------cccHHHHHHHHHHHHHhccCCeEe
Confidence 467889999999999999999976 68899999996554322 24556677888888777 599999
Q ss_pred eEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCC
Q 002250 706 KLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWK 785 (947)
Q Consensus 706 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~ 785 (947)
.+++.|+.+++.|.||||+.||++..+.+ ...+++....-+|..|+.||.||| +++||+||||.+|||+|.+|.
T Consensus 433 ~L~~~fQT~~~l~fvmey~~Ggdm~~~~~---~~~F~e~rarfyaAev~l~L~fLH---~~~IIYRDlKLdNiLLD~eGh 506 (694)
T KOG0694|consen 433 NLFSCFQTKEHLFFVMEYVAGGDLMHHIH---TDVFSEPRARFYAAEVVLGLQFLH---ENGIIYRDLKLDNLLLDTEGH 506 (694)
T ss_pred ecccccccCCeEEEEEEecCCCcEEEEEe---cccccHHHHHHHHHHHHHHHHHHH---hcCceeeecchhheEEcccCc
Confidence 99999999999999999999999544444 356899999999999999999999 899999999999999999999
Q ss_pred eEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHh
Q 002250 786 PRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYS 865 (947)
Q Consensus 786 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~ 865 (947)
+||+|||+++..-.. ...+...+||+.|||||++.+..|+..+|.|||||++|||+.|+.||.++. .+++.+ +
T Consensus 507 ~kiADFGlcKe~m~~--g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gdd--Eee~Fd---s 579 (694)
T KOG0694|consen 507 VKIADFGLCKEGMGQ--GDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDD--EEEVFD---S 579 (694)
T ss_pred EEecccccccccCCC--CCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCC--HHHHHH---H
Confidence 999999999854322 234567899999999999999999999999999999999999999995431 222221 1
Q ss_pred hccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCH
Q 002250 866 KMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSM 910 (947)
Q Consensus 866 ~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~ 910 (947)
.+.. |+.+ +.-...+.+.++.+.+.++|++|.-+
T Consensus 580 I~~d--------~~~y---P~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 580 IVND--------EVRY---PRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred HhcC--------CCCC---CCcccHHHHHHHHHHhccCcccccCC
Confidence 1111 1222 33344567788889999999999866
No 48
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=5.7e-37 Score=306.74 Aligned_cols=267 Identities=21% Similarity=0.203 Sum_probs=199.8
Q ss_pred HhhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccc
Q 002250 627 IIDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVV 705 (947)
Q Consensus 627 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 705 (947)
-++.|+..+.|++|+||.||+|+.+ +++.||+|+++.+. ....-.-...|||.++.+++|||||
T Consensus 74 sv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmek---------------ek~GFPItsLREIniLl~~~H~NIV 138 (419)
T KOG0663|consen 74 SVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEK---------------EKEGFPITSLREINILLKARHPNIV 138 (419)
T ss_pred cHHHHHHHhhcccCcceeEEEeccCCcceeEEeeeccccc---------------ccCCCcchhHHHHHHHHhcCCCCee
Confidence 3577888999999999999999955 78999999995332 1112223456899999999999999
Q ss_pred eEEEEEec--CCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCC
Q 002250 706 KLYCSITS--EDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLE 783 (947)
Q Consensus 706 ~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~ 783 (947)
.+-.+... -+..|+||||++. +|...+.... +++....+..+..|+++|++||| ...|+|||||++|+|+.+.
T Consensus 139 ~vkEVVvG~~~d~iy~VMe~~Eh-DLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH---~~wilHRDLK~SNLLm~~~ 213 (419)
T KOG0663|consen 139 EVKEVVVGSNMDKIYIVMEYVEH-DLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLH---DNWILHRDLKTSNLLLSHK 213 (419)
T ss_pred eeEEEEeccccceeeeeHHHHHh-hHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHh---hceeEecccchhheeeccC
Confidence 99887654 4568999999965 8888888744 67888999999999999999999 8899999999999999999
Q ss_pred CCeEEeccccceecccCCCCcceecccccccccCccccccCC-CCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHH
Q 002250 784 WKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCK-INEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNW 862 (947)
Q Consensus 784 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~ 862 (947)
|.+||+|||+|+.+..... ..+..+-|.+|.|||.+.+.+ |++++|+||+|||+.||+++++-|.+... .+.+...
T Consensus 214 G~lKiaDFGLAR~ygsp~k--~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE-~dQl~~I 290 (419)
T KOG0663|consen 214 GILKIADFGLAREYGSPLK--PYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSE-IDQLDKI 290 (419)
T ss_pred CcEEecccchhhhhcCCcc--cCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCch-HHHHHHH
Confidence 9999999999998876532 233456799999999998765 89999999999999999999987744321 1111111
Q ss_pred HHhhcccccccccccc-------CCCC---------ccCHH-HHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 863 VYSKMDSRDSMLTVVD-------PNIS---------EILKE-DALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 863 ~~~~~~~~~~~~~~~d-------~~~~---------~~~~~-~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
........+....-++ -.++ .+... ....-++++...+.+||.+|.|+.|.+++
T Consensus 291 f~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 291 FKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred HHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence 1111111111000000 0000 11111 22456788889999999999999999864
No 49
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-38 Score=334.55 Aligned_cols=253 Identities=28% Similarity=0.394 Sum_probs=214.9
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
+..+.++||-|.||.||.|.|+ -.-.||||.++ ......++|..|+.+|+.++|||+|+++
T Consensus 268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLK------------------EDtMeveEFLkEAAvMKeikHpNLVqLL 329 (1157)
T KOG4278|consen 268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK------------------EDTMEVEEFLKEAAVMKEIKHPNLVQLL 329 (1157)
T ss_pred heeeeeccCCCcccceeeeeeeccceeeehhhhh------------------hcchhHHHHHHHHHHHHhhcCccHHHHh
Confidence 3456789999999999999987 35679999874 2335678999999999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRI 788 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 788 (947)
|+|..+...|||+|||..|+|.+|++.+.+...+....+.||.||+.||+||. .+.+|||||.++|+|+.++..+|+
T Consensus 330 GVCT~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLE---kknFIHRDLAARNCLVgEnhiVKv 406 (1157)
T KOG4278|consen 330 GVCTHEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHIVKV 406 (1157)
T ss_pred hhhccCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHH---HhhhhhhhhhhhhccccccceEEe
Confidence 99999999999999999999999999998888999999999999999999999 899999999999999999999999
Q ss_pred eccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhc
Q 002250 789 ADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNWVYSKM 867 (947)
Q Consensus 789 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 867 (947)
+|||+++.+..+.+.. .....-...|.|||-+....++.|+|||+|||++||+.| |-.||.+ .++. .++...
T Consensus 407 ADFGLsRlMtgDTYTA-HAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPG-----idlS-qVY~LL 479 (1157)
T KOG4278|consen 407 ADFGLSRLMTGDTYTA-HAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPG-----IDLS-QVYGLL 479 (1157)
T ss_pred eccchhhhhcCCceec-ccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCC-----ccHH-HHHHHH
Confidence 9999999886553321 112223578999999999999999999999999999999 8888742 2222 233333
Q ss_pred cccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhc
Q 002250 868 DSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEE 919 (947)
Q Consensus 868 ~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~ 919 (947)
+.... .+.++.|++.++++|++||+.+|.+||+++|+-+.++.
T Consensus 480 EkgyR---------M~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEt 522 (1157)
T KOG4278|consen 480 EKGYR---------MDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFET 522 (1157)
T ss_pred hcccc---------ccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHH
Confidence 33322 34567788999999999999999999999999988875
No 50
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1e-37 Score=298.84 Aligned_cols=252 Identities=25% Similarity=0.345 Sum_probs=209.2
Q ss_pred hhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccce
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVK 706 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 706 (947)
.++|++++.||+|-||.||.|+.+ ++-.||+|++... ++ ....-...+.+|++|-+.|+||||++
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKs------------qi--~~~~v~~qlrREiEIqs~L~hpnilr 86 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKS------------QI--LKTQVEHQLRREIEIQSHLRHPNILR 86 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHH------------HH--HHhcchhhhhheeEeecccCCccHHh
Confidence 478999999999999999999955 6788999998421 11 12234567899999999999999999
Q ss_pred EEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCe
Q 002250 707 LYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKP 786 (947)
Q Consensus 707 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 786 (947)
+|++|.+....|+++||.++|++...+.......++......+..|+|.|+.|+| .++|+||||||+|+|++.++..
T Consensus 87 lY~~fhd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h---~k~VIhRdiKpenlLlg~~~~l 163 (281)
T KOG0580|consen 87 LYGYFHDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCH---LKRVIHRDIKPENLLLGSAGEL 163 (281)
T ss_pred hhhheeccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhc---cCCcccCCCCHHHhccCCCCCe
Confidence 9999999999999999999999999999766777888888999999999999999 9999999999999999999999
Q ss_pred EEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 002250 787 RIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSK 866 (947)
Q Consensus 787 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 866 (947)
|++|||-+...+.. .....+||.-|.|||+..+..++..+|+|++|++.||++.|.+||.... .. -.++.
T Consensus 164 kiAdfGwsV~~p~~----kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~--~~----etYkr 233 (281)
T KOG0580|consen 164 KIADFGWSVHAPSN----KRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS--HS----ETYKR 233 (281)
T ss_pred eccCCCceeecCCC----CceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh--hH----HHHHH
Confidence 99999998755422 2335689999999999999999999999999999999999999995432 11 11222
Q ss_pred ccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 867 MDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 867 ~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
+...+ -. ++........+++.+|+.++|.+|.+..|++.+
T Consensus 234 I~k~~-------~~---~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 234 IRKVD-------LK---FPSTISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred HHHcc-------cc---CCcccChhHHHHHHHHhccCccccccHHHHhhh
Confidence 21111 11 223444567788889999999999999999875
No 51
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=3.4e-38 Score=336.45 Aligned_cols=251 Identities=32% Similarity=0.475 Sum_probs=194.4
Q ss_pred CcccccccCceeEEEEEeC-----CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 633 PENLIGKGGSGNVYKVVLN-----SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 633 ~~~~iG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
..+.||+|.||.||+|.+. .+..|+||++... ......+.|.+|++.+++++||||+++
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~----------------~~~~~~~~~~~e~~~l~~l~h~ni~~~ 66 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS----------------SSEEEEEEFLNEIQILRKLRHPNIVKL 66 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT----------------SSHHHHHHHHHHHHHHHTHSBTTBE-E
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc----------------cccccceeeeecccccccccccccccc
Confidence 4568999999999999976 3568999998321 111235788999999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
+|++...+..++||||+++|+|.+++.......+++..+..++.|+|+||+||| +.+++|+||+++||+++.++.+|
T Consensus 67 ~g~~~~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh---~~~iiH~~l~~~nill~~~~~~K 143 (259)
T PF07714_consen 67 YGFCIENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLH---SNNIIHGNLSPSNILLDSNGQVK 143 (259)
T ss_dssp EEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHH---HTTEEEST-SGGGEEEETTTEEE
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccc
Confidence 999998888999999999999999999865667999999999999999999999 78999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHhh
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNWVYSK 866 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~ 866 (947)
|+|||++................+...|+|||.+....++.++||||||+++|||++ |+.||... ...++...+
T Consensus 144 l~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~--~~~~~~~~~--- 218 (259)
T PF07714_consen 144 LSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY--DNEEIIEKL--- 218 (259)
T ss_dssp EESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS--CHHHHHHHH---
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--ccccccccc---
Confidence 999999987633222222223346788999999999889999999999999999999 67887432 222222221
Q ss_pred ccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 002250 867 MDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQML 917 (947)
Q Consensus 867 ~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L 917 (947)
.+.. ..+.+...+..+.+++.+||+.+|++|||+.++++.|
T Consensus 219 ~~~~----------~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 219 KQGQ----------RLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp HTTE----------ETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred cccc----------cceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 1111 1122233456688999999999999999999999876
No 52
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=3.4e-37 Score=329.73 Aligned_cols=255 Identities=25% Similarity=0.394 Sum_probs=206.9
Q ss_pred hccCCcccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
++|++.+.||+|+||.||+|...+++.||+|.+.+. ....+.+.+|+.++++++|+||++++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~------------------~~~~~~~~~e~~~l~~l~h~~i~~~~ 67 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPG------------------TMSVQAFLEEANLMKTLQHDKLVRLY 67 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCC------------------chhHHHHHHHHHHHHhCCCCCeeeEE
Confidence 678899999999999999999888889999987321 12346788999999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRI 788 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 788 (947)
+++..++..++||||+++++|.++++......+++..+..++.|++.|++||| +.+++||||||+||+++.++.++|
T Consensus 68 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l 144 (261)
T cd05072 68 AVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKI 144 (261)
T ss_pred EEEcCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEecCCCcEEE
Confidence 99999999999999999999999998765667899999999999999999999 899999999999999999999999
Q ss_pred eccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhc
Q 002250 789 ADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNWVYSKM 867 (947)
Q Consensus 789 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 867 (947)
+|||.++........ ......++..|+|||+...+.++.++|||||||++|||+| |+.||... ..........
T Consensus 145 ~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~--~~~~~~~~~~--- 218 (261)
T cd05072 145 ADFGLARVIEDNEYT-AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGM--SNSDVMSALQ--- 218 (261)
T ss_pred CCCccceecCCCcee-ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCC--CHHHHHHHHH---
Confidence 999999865433211 1112345678999999988889999999999999999999 89998432 1111222111
Q ss_pred cccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 002250 868 DSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEA 920 (947)
Q Consensus 868 ~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 920 (947)
.... .+.....+..+.+++.+|++.+|++||++.++.++|+++
T Consensus 219 -~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 219 -RGYR---------MPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred -cCCC---------CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 1110 011112345688899999999999999999999999864
No 53
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-37 Score=317.76 Aligned_cols=273 Identities=24% Similarity=0.321 Sum_probs=207.8
Q ss_pred ccHHHHhhccCCcccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHh--hc
Q 002250 622 FSEKEIIDAVKPENLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLS--AV 699 (947)
Q Consensus 622 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~--~l 699 (947)
+-..++.++..+.+.||+|.||+||+|.++ |+.||||+|. . .+.....+|.+|++ -|
T Consensus 204 LVQRTiarqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~------------------s--rdE~SWfrEtEIYqTvmL 262 (513)
T KOG2052|consen 204 LVQRTIARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFS------------------S--RDERSWFRETEIYQTVML 262 (513)
T ss_pred HhHHhhhheeEEEEEecCccccceeecccc-CCceEEEEec------------------c--cchhhhhhHHHHHHHHHh
Confidence 344677788899999999999999999999 8999999982 1 22334445555555 56
Q ss_pred cccccceEEEEEecCC----ccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhc-----CCCCCeEe
Q 002250 700 RHVNVVKLYCSITSED----SNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHH-----GFDRPVIH 770 (947)
Q Consensus 700 ~h~niv~l~~~~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~-----~~~~~ivH 770 (947)
+|+||+.|++.-..+. ..++|.+|.+.|||.||+.. .+++....++++..+|.||+|||. .-.+.|.|
T Consensus 263 RHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r---~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAH 339 (513)
T KOG2052|consen 263 RHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNR---NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAH 339 (513)
T ss_pred ccchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhh---ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhc
Confidence 9999999998765543 35899999999999999987 568999999999999999999993 23678999
Q ss_pred ccCCCCCeEecCCCCeEEeccccceecccCC--CCcceecccccccccCccccccCC----C--CCccchHHHHHHHHHH
Q 002250 771 RDVKSSNILLDLEWKPRIADFGLAKIVQTGE--AGDLTHVIAGTHGYIAPEYAYTCK----I--NEKSDVYSFGVVLMEL 842 (947)
Q Consensus 771 ~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~----~--~~~~Dv~slGv~l~el 842 (947)
||||+.|||+..++.+.|+|+|+|..+.... ........+||.+|||||++...- + -..+||||||.|+||+
T Consensus 340 RDlKSKNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEi 419 (513)
T KOG2052|consen 340 RDLKSKNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEI 419 (513)
T ss_pred cccccccEEEccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHH
Confidence 9999999999999999999999998766542 123345678999999999985432 1 1368999999999999
Q ss_pred HhC----------CCCCCCCCCCcccHHHHHHhhccccccccccccCCCCc--cCHHHHHHHHHHHHhccCCCCCCCCCH
Q 002250 843 VTG----------KRPIVPEFGDSKDIVNWVYSKMDSRDSMLTVVDPNISE--ILKEDALKVLRIAIHCTNKLPAFRPSM 910 (947)
Q Consensus 843 ltg----------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~~l~~l~~~cl~~dP~~RPt~ 910 (947)
+-. +.||.+.-..+..+.++.... -.+-+.|.++. ...+....+.++|..||..+|..|-|+
T Consensus 420 arRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVV------Cv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltA 493 (513)
T KOG2052|consen 420 ARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVV------CVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTA 493 (513)
T ss_pred HHHhhcCCEehhhcCCcccCCCCCCCHHHHhcce------eecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHH
Confidence 842 456654333333333321110 01112222322 234567789999999999999999999
Q ss_pred HHHHHHhhccCCCC
Q 002250 911 RVVVQMLEEAEPCS 924 (947)
Q Consensus 911 ~ev~~~L~~~~~~~ 924 (947)
-.+.+.|.++...+
T Consensus 494 LriKKtl~~l~~~~ 507 (513)
T KOG2052|consen 494 LRIKKTLAKLSNSD 507 (513)
T ss_pred HHHHHHHHHHhcCh
Confidence 99999999887644
No 54
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=3.1e-37 Score=347.16 Aligned_cols=261 Identities=25% Similarity=0.347 Sum_probs=204.9
Q ss_pred hhccCCcccccccCceeEEEEEeC------CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcc-
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLN------SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVR- 700 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~- 700 (947)
.++|.+.+.||+|+||.||+|... .+..||||++.+.. .....+.+.+|+++++++.
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~----------------~~~~~~~~~~Ei~~l~~l~~ 99 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA----------------RSSEKQALMSELKIMTHLGP 99 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC----------------ChHHHHHHHHHHHHHHhcCC
Confidence 367888999999999999999853 13469999984321 1123457889999999996
Q ss_pred ccccceEEEEEecCCccEEEEeccCCCChHHHhhhcC-------------------------------------------
Q 002250 701 HVNVVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCH------------------------------------------- 737 (947)
Q Consensus 701 h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~------------------------------------------- 737 (947)
||||+++++++.+.+..|+||||+++|+|.+++....
T Consensus 100 HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (400)
T cd05105 100 HLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMD 179 (400)
T ss_pred CCCeeeEEEEEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccc
Confidence 9999999999999999999999999999999986531
Q ss_pred ---------------------------------------------------CccCCHHHHHHHHHHHHHHHHHHhcCCCC
Q 002250 738 ---------------------------------------------------KIEMDWVVRYAIAVGAAKGLEYLHHGFDR 766 (947)
Q Consensus 738 ---------------------------------------------------~~~~~~~~~~~i~~~ia~~l~yLH~~~~~ 766 (947)
...+++..+..++.|++.|++||| +.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~ 256 (400)
T cd05105 180 MKQADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLA---SK 256 (400)
T ss_pred cccccccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---hC
Confidence 123678888999999999999999 89
Q ss_pred CeEeccCCCCCeEecCCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-C
Q 002250 767 PVIHRDVKSSNILLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-G 845 (947)
Q Consensus 767 ~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g 845 (947)
+|+||||||+||++++++.+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |
T Consensus 257 ~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g 336 (400)
T cd05105 257 NCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLG 336 (400)
T ss_pred CeeCCCCChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCC
Confidence 999999999999999999999999999986544332222223456788999999998889999999999999999997 8
Q ss_pred CCCCCCCCCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccC
Q 002250 846 KRPIVPEFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAE 921 (947)
Q Consensus 846 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~ 921 (947)
..||.....+ ..+. ........ ...+...+..+.+++.+||+.+|++|||+.++.++|+++-
T Consensus 337 ~~P~~~~~~~-~~~~----~~~~~~~~---------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 337 GTPYPGMIVD-STFY----NKIKSGYR---------MAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred CCCCcccchh-HHHH----HHHhcCCC---------CCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 8998532111 1111 11111110 1122334567889999999999999999999999999754
No 55
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=4.9e-37 Score=327.02 Aligned_cols=248 Identities=25% Similarity=0.332 Sum_probs=194.9
Q ss_pred hhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccce
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVK 706 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 706 (947)
.++|+....||+|+||.||.|+-+ +|..+|+|+++...+- ...+......|-.+|....+|.||+
T Consensus 140 ~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~--------------~~~Qv~hV~aERdiL~~~ds~~vVK 205 (550)
T KOG0605|consen 140 LDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEML--------------KKNQVEHVRAERDILAEVDSPWVVK 205 (550)
T ss_pred cccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHH--------------hhhhHHHHHHHHHHhhhcCCCcEEE
Confidence 477999999999999999999955 6999999999644322 2244567888999999999999999
Q ss_pred EEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCe
Q 002250 707 LYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKP 786 (947)
Q Consensus 707 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 786 (947)
+|-.|++.+..|+||||+|||++..+|.+.+. +++......+.+++.|++-+| ..|+|||||||+|+|||..|++
T Consensus 206 LyYsFQD~~~LYLiMEylPGGD~mTLL~~~~~--L~e~~arfYiaE~vlAI~~iH---~~gyIHRDIKPdNlLiD~~GHi 280 (550)
T KOG0605|consen 206 LYYSFQDKEYLYLIMEYLPGGDMMTLLMRKDT--LTEDWARFYIAETVLAIESIH---QLGYIHRDIKPDNLLIDAKGHI 280 (550)
T ss_pred EEEEecCCCeeEEEEEecCCccHHHHHHhcCc--CchHHHHHHHHHHHHHHHHHH---HcCcccccCChhheeecCCCCE
Confidence 99999999999999999999999999987544 555556667888899999999 8999999999999999999999
Q ss_pred EEeccccceeccc----------------------CCCC-----cc------------------eecccccccccCcccc
Q 002250 787 RIADFGLAKIVQT----------------------GEAG-----DL------------------THVIAGTHGYIAPEYA 821 (947)
Q Consensus 787 kl~DfG~a~~~~~----------------------~~~~-----~~------------------~~~~~gt~~y~aPE~~ 821 (947)
||+|||++.-... .+.. .. ....+|||-|||||++
T Consensus 281 KLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVl 360 (550)
T KOG0605|consen 281 KLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVL 360 (550)
T ss_pred eeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHH
Confidence 9999999842211 0000 00 0135699999999999
Q ss_pred ccCCCCCccchHHHHHHHHHHHhCCCCCCCCC--CCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhc
Q 002250 822 YTCKINEKSDVYSFGVVLMELVTGKRPIVPEF--GDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHC 899 (947)
Q Consensus 822 ~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~c 899 (947)
.+..|+..+|.||+|||+|||+.|.+||..+. .....+..|........ +. ....+..++|.+|
T Consensus 361 l~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~-------~~-------~~s~eA~DLI~rl 426 (550)
T KOG0605|consen 361 LGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPE-------EV-------DLSDEAKDLITRL 426 (550)
T ss_pred hcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCC-------cC-------cccHHHHHHHHHH
Confidence 99999999999999999999999999996442 22223333322111111 11 1125677888899
Q ss_pred cCCCCCCCCC
Q 002250 900 TNKLPAFRPS 909 (947)
Q Consensus 900 l~~dP~~RPt 909 (947)
+. ||++|.-
T Consensus 427 l~-d~~~RLG 435 (550)
T KOG0605|consen 427 LC-DPENRLG 435 (550)
T ss_pred hc-CHHHhcC
Confidence 98 9999976
No 56
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9.8e-38 Score=317.94 Aligned_cols=252 Identities=23% Similarity=0.325 Sum_probs=209.7
Q ss_pred hhccCCcccccccCceeEEEEE-eCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccce
Q 002250 628 IDAVKPENLIGKGGSGNVYKVV-LNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVK 706 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 706 (947)
.-+|++.+.+|+|.||.|-+|. ...|+.||||.++.+. .+..++...+.+||+||+.|+||||+.
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdk--------------IkdeqDlvhIRREIeIMSsLNHPhII~ 117 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDK--------------IKDEQDLVHIRREIEIMSSLNHPHIIQ 117 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhh--------------cccHHHHHHHHHHHHHHhhcCCCceee
Confidence 4578889999999999999999 4789999999985332 233455677899999999999999999
Q ss_pred EEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCe
Q 002250 707 LYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKP 786 (947)
Q Consensus 707 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 786 (947)
+|++|+..+...|||||..+|.|.||+..+ ..+++.....++.||..|+.|+| .+++||||||.+|||+|.++++
T Consensus 118 IyEVFENkdKIvivMEYaS~GeLYDYiSer--~~LsErEaRhfFRQIvSAVhYCH---knrVvHRDLKLENILLD~N~Ni 192 (668)
T KOG0611|consen 118 IYEVFENKDKIVIVMEYASGGELYDYISER--GSLSEREARHFFRQIVSAVHYCH---KNRVVHRDLKLENILLDQNNNI 192 (668)
T ss_pred hhhhhcCCceEEEEEEecCCccHHHHHHHh--ccccHHHHHHHHHHHHHHHHHHh---hccceecccchhheeecCCCCe
Confidence 999999999999999999999999999975 45888889999999999999999 8999999999999999999999
Q ss_pred EEeccccceecccCCCCcceecccccccccCccccccCCCC-CccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHh
Q 002250 787 RIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKIN-EKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYS 865 (947)
Q Consensus 787 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~ 865 (947)
||+|||++..+..... ...++|++-|.+||++.+..|. +.+|.||+||++|.++.|..||++ .+.-..+..
T Consensus 193 KIADFGLSNly~~~kf---LqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG-----~Dhk~lvrQ 264 (668)
T KOG0611|consen 193 KIADFGLSNLYADKKF---LQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDG-----RDHKRLVRQ 264 (668)
T ss_pred eeeccchhhhhccccH---HHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCC-----chHHHHHHH
Confidence 9999999987765543 3457999999999999988874 789999999999999999999953 334344333
Q ss_pred hccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 002250 866 KMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLE 918 (947)
Q Consensus 866 ~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~ 918 (947)
.-.+... + ++. +....-++++|+..+|++|.|..+|..+..
T Consensus 265 Is~GaYr-----E---P~~----PSdA~gLIRwmLmVNP~RRATieDiAsHWW 305 (668)
T KOG0611|consen 265 ISRGAYR-----E---PET----PSDASGLIRWMLMVNPERRATIEDIASHWW 305 (668)
T ss_pred hhccccc-----C---CCC----CchHHHHHHHHHhcCcccchhHHHHhhhhe
Confidence 3222211 0 112 223445778999999999999999998764
No 57
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=6.3e-37 Score=326.63 Aligned_cols=252 Identities=23% Similarity=0.312 Sum_probs=201.8
Q ss_pred hccCCcccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
+.|++.+.||+|+||.||+|..+++..+|+|.+... ......+.+|+.++++++||||++++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~------------------~~~~~~~~~e~~~l~~l~h~~i~~~~ 65 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEG------------------AMSEEDFIEEAKVMMKLSHPKLVQLY 65 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccC------------------CccHHHHHHHHHHHHHCCCCCceeEE
Confidence 467888999999999999999988889999987311 12345788999999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRI 788 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 788 (947)
+++..++..++||||+++|+|.++++... ..+++..+..++.|++.||+||| +.+|+||||||+||++++++.+++
T Consensus 66 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl 141 (256)
T cd05114 66 GVCTQQKPLYIVTEFMENGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLE---RNSFIHRDLAARNCLVSSTGVVKV 141 (256)
T ss_pred EEEccCCCEEEEEEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcceEEEcCCCeEEE
Confidence 99999999999999999999999997632 35889999999999999999999 899999999999999999999999
Q ss_pred eccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhc
Q 002250 789 ADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNWVYSKM 867 (947)
Q Consensus 789 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 867 (947)
+|||.++........ ......++..|+|||++....++.++||||||+++|||++ |+.||... +..+......
T Consensus 142 ~d~g~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~-----~~~~~~~~i~ 215 (256)
T cd05114 142 SDFGMTRYVLDDEYT-SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKK-----SNYEVVEMIS 215 (256)
T ss_pred CCCCCccccCCCcee-ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHHH
Confidence 999999765432221 1112235668999999988889999999999999999999 88898432 1122222111
Q ss_pred cccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 002250 868 DSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLE 918 (947)
Q Consensus 868 ~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~ 918 (947)
..... ..+...+..+.+++.+||+.+|++||++.++++.|.
T Consensus 216 ~~~~~----------~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 216 RGFRL----------YRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred CCCCC----------CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 11110 011122356889999999999999999999999873
No 58
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.8e-38 Score=319.60 Aligned_cols=258 Identities=24% Similarity=0.368 Sum_probs=197.3
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
-.|...+.+|.|+||.||+|... +++.||||+++++.. .-.+|+++|++++|||||++
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r---------------------~knrEl~im~~l~HpNIV~L 82 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR---------------------YKNRELQIMRKLDHPNIVRL 82 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC---------------------cCcHHHHHHHhcCCcCeeeE
Confidence 45777899999999999999955 579999999975431 12369999999999999999
Q ss_pred EEEEecCCc-----cEEEEeccCCCChHHHhhhc--CCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEe
Q 002250 708 YCSITSEDS-----NLLVYEYLPNGSLWDRLHTC--HKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILL 780 (947)
Q Consensus 708 ~~~~~~~~~-----~~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll 780 (947)
.-+|....+ ..+||||||. +|.+.++.. .+..++...+..+..|+.+||+||| +.+|+||||||.|+|+
T Consensus 83 ~~~f~~~~~~d~~~lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh---~~~IcHRDIKPqNlLv 158 (364)
T KOG0658|consen 83 LYFFSSSTESDEVYLNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLH---SHGICHRDIKPQNLLV 158 (364)
T ss_pred EEEEEecCCCchhHHHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHH---hcCcccCCCChheEEE
Confidence 888755322 2489999965 899998853 3456777788889999999999999 8999999999999999
Q ss_pred cCC-CCeEEeccccceecccCCCCcceecccccccccCccccccCC-CCCccchHHHHHHHHHHHhCCCCCCCCCCCccc
Q 002250 781 DLE-WKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCK-INEKSDVYSFGVVLMELVTGKRPIVPEFGDSKD 858 (947)
Q Consensus 781 ~~~-~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~ 858 (947)
|.+ |.+||||||.|+....++... ....|..|.|||.+.+.. |+.+.||||.|||+.||+-|++-|.+.. ....
T Consensus 159 D~~tg~LKicDFGSAK~L~~~epni---SYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s-~~dQ 234 (364)
T KOG0658|consen 159 DPDTGVLKICDFGSAKVLVKGEPNI---SYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDS-SVDQ 234 (364)
T ss_pred cCCCCeEEeccCCcceeeccCCCce---eEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCC-HHHH
Confidence 976 999999999999887766543 235688999999998865 9999999999999999999998875432 2222
Q ss_pred HHHHHHhhcccccccccccc--------CCC-----Cc-cCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 859 IVNWVYSKMDSRDSMLTVVD--------PNI-----SE-ILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 859 ~~~~~~~~~~~~~~~~~~~d--------~~~-----~~-~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
+...+.........-..... +.+ .+ +.....++..+++.+++.++|.+|.++.|++.
T Consensus 235 L~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 235 LVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred HHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 33332222111110001111 111 11 33456678999999999999999999999884
No 59
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=1.2e-36 Score=325.48 Aligned_cols=255 Identities=25% Similarity=0.389 Sum_probs=206.0
Q ss_pred hccCCcccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
+.|++.+.||+|++|.||+|...+++.||||.+... ....+.+.+|+.++++++||||++++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~------------------~~~~~~~~~e~~~l~~l~h~~i~~~~ 67 (261)
T cd05068 6 TSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPG------------------TMDPKDFLAEAQIMKKLRHPKLIQLY 67 (261)
T ss_pred hheeeEEEecccCCccEEEEEecCCeEEEEEeeCCC------------------cccHHHHHHHHHHHHHCCCCCcccee
Confidence 568889999999999999999887889999988421 12345688999999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRI 788 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 788 (947)
+++...+..++||||+++++|.+++.......+++..+..++.|++.|+.||| +.+|+||||||+||++++++.++|
T Consensus 68 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l 144 (261)
T cd05068 68 AVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLE---AQNYIHRDLAARNVLVGENNICKV 144 (261)
T ss_pred EEEecCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCcceEEEcCCCCEEE
Confidence 99999999999999999999999998755557899999999999999999999 889999999999999999999999
Q ss_pred eccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhc
Q 002250 789 ADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNWVYSKM 867 (947)
Q Consensus 789 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 867 (947)
+|||+++......... ......+..|+|||+..+..++.++||||||+++|||++ |+.||.... ...... .+
T Consensus 145 ~dfg~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--~~~~~~----~~ 217 (261)
T cd05068 145 ADFGLARVIKEDIYEA-REGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMT--NAEVLQ----QV 217 (261)
T ss_pred CCcceEEEccCCcccc-cCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCC--HHHHHH----HH
Confidence 9999998765332111 111223457999999998889999999999999999999 888884321 111111 11
Q ss_pred cccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 002250 868 DSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEA 920 (947)
Q Consensus 868 ~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 920 (947)
..... .......+..+.+++.+|++.+|++||++.++.+.|+++
T Consensus 218 ~~~~~---------~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 218 DQGYR---------MPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred HcCCC---------CCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 11110 011223346788999999999999999999999999864
No 60
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=4.7e-37 Score=333.73 Aligned_cols=248 Identities=23% Similarity=0.306 Sum_probs=199.5
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
++|++.+.||+|+||.||+|... +++.||||++.... .........+.+|+.++++++||||+++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~--------------~~~~~~~~~~~~E~~~l~~l~hp~iv~~ 66 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPE--------------VIRLKQEQHVHNEKRVLKEVSHPFIIRL 66 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHH--------------HhhhHHHHHHHHHHHHHHhCCCCcHhhh
Confidence 36888999999999999999965 68999999983110 0011234568899999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
++++.++...++||||+++|+|.+++... ..+++.....++.|++.||+||| +++|+||||||+||+++.++.+|
T Consensus 67 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~NIli~~~~~~k 141 (291)
T cd05612 67 FWTEHDQRFLYMLMEYVPGGELFSYLRNS--GRFSNSTGLFYASEIVCALEYLH---SKEIVYRDLKPENILLDKEGHIK 141 (291)
T ss_pred HhhhccCCeEEEEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEE
Confidence 99999999999999999999999999864 35788888999999999999999 89999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKM 867 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 867 (947)
|+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||... ..........
T Consensus 142 l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~-----~~~~~~~~i~ 211 (291)
T cd05612 142 LTDFGFAKKLRDRT-----WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDD-----NPFGIYEKIL 211 (291)
T ss_pred EEecCcchhccCCc-----ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHH
Confidence 99999997654321 2346899999999999888999999999999999999999998532 1111111111
Q ss_pred cccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHHH
Q 002250 868 DSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPS-----MRVVVQM 916 (947)
Q Consensus 868 ~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~ev~~~ 916 (947)
.... +++......+.+++.+|++.||.+||+ +.|++++
T Consensus 212 ~~~~-----------~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 212 AGKL-----------EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred hCCc-----------CCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 1111 112222456788999999999999995 7777755
No 61
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=7.2e-37 Score=330.94 Aligned_cols=257 Identities=25% Similarity=0.394 Sum_probs=205.0
Q ss_pred hccCCcccccccCceeEEEEEeCC------CcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcccc
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLNS------GKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHV 702 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 702 (947)
+.|.+.+.||+|+||.||+|...+ ++.||||.+.... .....+.+.+|++++++++||
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~----------------~~~~~~~~~~e~~~l~~l~~~ 68 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA----------------SNDARKDFEREAELLTNFQHE 68 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC----------------CHHHHHHHHHHHHHHHhcCCC
Confidence 567888999999999999998643 4789999873211 112346789999999999999
Q ss_pred ccceEEEEEecCCccEEEEeccCCCChHHHhhhcC------------CccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEe
Q 002250 703 NVVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCH------------KIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIH 770 (947)
Q Consensus 703 niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~------------~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH 770 (947)
||+++++++......++||||+++++|.+++...+ ...+++.....++.|++.|++||| +.+++|
T Consensus 69 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~h 145 (280)
T cd05049 69 NIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLA---SQHFVH 145 (280)
T ss_pred CchheeeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeec
Confidence 99999999999999999999999999999997542 245788899999999999999999 899999
Q ss_pred ccCCCCCeEecCCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCC
Q 002250 771 RDVKSSNILLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPI 849 (947)
Q Consensus 771 ~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~ 849 (947)
|||||+||+++.++.++|+|||.++...............+++.|+|||++.++.++.++|||||||++|||++ |..||
T Consensus 146 ~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~ 225 (280)
T cd05049 146 RDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPW 225 (280)
T ss_pred cccccceEEEcCCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCC
Confidence 99999999999999999999999976543332222223346788999999999999999999999999999999 99998
Q ss_pred CCCCCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhc
Q 002250 850 VPEFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEE 919 (947)
Q Consensus 850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~ 919 (947)
.... .....+... . ......+...+..+.+++.+||+.||++||++.||++.|++
T Consensus 226 ~~~~--~~~~~~~~~---~----------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 226 YGLS--NEEVIECIT---Q----------GRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred CCCC--HHHHHHHHH---c----------CCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 5321 112222111 1 11111222345678899999999999999999999999864
No 62
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=6.5e-37 Score=338.41 Aligned_cols=249 Identities=21% Similarity=0.295 Sum_probs=200.0
Q ss_pred hhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccce
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVK 706 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 706 (947)
.++|++.+.||+|+||.||+|+.. +++.||||++.... .........+.+|+.++++++||||++
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~--------------~~~~~~~~~~~~E~~~l~~l~hp~iv~ 82 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKRE--------------ILKMKQVQHVAQEKSILMELSHPFIVN 82 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHH--------------HhhhhhHHHHHHHHHHHHhCCCCCCCc
Confidence 367888999999999999999966 68999999984210 111233467889999999999999999
Q ss_pred EEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCe
Q 002250 707 LYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKP 786 (947)
Q Consensus 707 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 786 (947)
+++++..++..|+||||+++|+|.+++... ..+++.....++.|++.||+||| +.+|+||||||+||+++.++.+
T Consensus 83 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~ 157 (329)
T PTZ00263 83 MMCSFQDENRVYFLLEFVVGGELFTHLRKA--GRFPNDVAKFYHAELVLAFEYLH---SKDIIYRDLKPENLLLDNKGHV 157 (329)
T ss_pred EEEEEEcCCEEEEEEcCCCCChHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEECCCCCE
Confidence 999999999999999999999999999864 34778888889999999999999 8999999999999999999999
Q ss_pred EEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 002250 787 RIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSK 866 (947)
Q Consensus 787 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 866 (947)
||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||... ...+.....
T Consensus 158 kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~-----~~~~~~~~i 227 (329)
T PTZ00263 158 KVTDFGFAKKVPDRT-----FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDD-----TPFRIYEKI 227 (329)
T ss_pred EEeeccCceEcCCCc-----ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCC-----CHHHHHHHH
Confidence 999999998654322 1346899999999999988999999999999999999999998532 111111111
Q ss_pred ccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHHH
Q 002250 867 MDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPS-----MRVVVQM 916 (947)
Q Consensus 867 ~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~ev~~~ 916 (947)
...... ++......+.+++.+|++.||.+||+ +.+++++
T Consensus 228 ~~~~~~-----------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 228 LAGRLK-----------FPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred hcCCcC-----------CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 111111 11112345778999999999999996 5777644
No 63
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=4.7e-37 Score=340.12 Aligned_cols=261 Identities=25% Similarity=0.343 Sum_probs=203.0
Q ss_pred hccCCcccccccCceeEEEEEeC------CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-cc
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN------SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-RH 701 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h 701 (947)
++|++.+.||+|+||.||+|... +++.||+|++.... .......+.+|+.+++++ +|
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~----------------~~~~~~~~~~E~~~~~~l~~h 70 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA----------------TASEYKALMTELKILIHIGHH 70 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC----------------CHHHHHHHHHHHHHHHhhccC
Confidence 57999999999999999999732 25789999883111 112234677899999999 89
Q ss_pred cccceEEEEEecC-CccEEEEeccCCCChHHHhhhcC-------------------------------------------
Q 002250 702 VNVVKLYCSITSE-DSNLLVYEYLPNGSLWDRLHTCH------------------------------------------- 737 (947)
Q Consensus 702 ~niv~l~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~------------------------------------------- 737 (947)
+||+++++++... ...++||||+++++|.+++....
T Consensus 71 ~niv~~~~~~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (337)
T cd05054 71 LNVVNLLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIED 150 (337)
T ss_pred cchhheeeeEecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccC
Confidence 9999999988654 55789999999999999986432
Q ss_pred ----------------CccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEeccccceecccCC
Q 002250 738 ----------------KIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFGLAKIVQTGE 801 (947)
Q Consensus 738 ----------------~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~ 801 (947)
..+++|..+.+++.||+.||+||| +.+|+||||||+||++++++.++|+|||+++......
T Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~ 227 (337)
T cd05054 151 KSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDP 227 (337)
T ss_pred cchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEeCCCcEEEeccccchhcccCc
Confidence 126789999999999999999999 8999999999999999999999999999998664433
Q ss_pred CCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhccccccccccccCC
Q 002250 802 AGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNWVYSKMDSRDSMLTVVDPN 880 (947)
Q Consensus 802 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 880 (947)
.........++..|+|||++.+..++.++|||||||++|||++ |..||..... ...+.... .....
T Consensus 228 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~-~~~~~~~~----~~~~~-------- 294 (337)
T cd05054 228 DYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQI-DEEFCRRL----KEGTR-------- 294 (337)
T ss_pred chhhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCc-cHHHHHHH----hccCC--------
Confidence 2222233456778999999999999999999999999999998 9999854221 11111111 11110
Q ss_pred CCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCC
Q 002250 881 ISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAEP 922 (947)
Q Consensus 881 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 922 (947)
...+......+.+++.+||+.+|++||++.|++++|+++-.
T Consensus 295 -~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 295 -MRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred -CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 01122334568899999999999999999999999997644
No 64
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1.5e-36 Score=334.09 Aligned_cols=262 Identities=23% Similarity=0.330 Sum_probs=203.9
Q ss_pred hccCCcccccccCceeEEEEEeC-CCc----EEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccc
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGK----ELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVN 703 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n 703 (947)
.+|+..+.||+|+||.||+|++. +++ .||||++.... .....+++.+|+.+++.++|||
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~----------------~~~~~~~~~~e~~~l~~l~h~n 70 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT----------------SPKANKEILDEAYVMASVDNPH 70 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccC----------------CHHHHHHHHHHHHHHHhCCCCC
Confidence 46888999999999999999854 343 48999873211 1123457889999999999999
Q ss_pred cceEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCC
Q 002250 704 VVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLE 783 (947)
Q Consensus 704 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~ 783 (947)
|++++|++..+ ..++|+||+++|+|.+++... ...+++...+.++.||+.||+||| +.+|+||||||+||+++.+
T Consensus 71 iv~~~g~~~~~-~~~~v~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~LH---~~~iiH~dlkp~Nill~~~ 145 (316)
T cd05108 71 VCRLLGICLTS-TVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLE---ERRLVHRDLAARNVLVKTP 145 (316)
T ss_pred CCeEEEEEcCC-CceeeeecCCCCCHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheEecCC
Confidence 99999999864 578999999999999999864 335788999999999999999999 8999999999999999999
Q ss_pred CCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHH
Q 002250 784 WKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNW 862 (947)
Q Consensus 784 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~ 862 (947)
+.+||+|||+++...............++..|+|||++....++.++|||||||++|||++ |+.||... ....+...
T Consensus 146 ~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~--~~~~~~~~ 223 (316)
T cd05108 146 QHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI--PASEISSI 223 (316)
T ss_pred CcEEEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCC--CHHHHHHH
Confidence 9999999999987654332222222234678999999999899999999999999999998 99998432 11112111
Q ss_pred HHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCCCCcc
Q 002250 863 VYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAEPCSVT 926 (947)
Q Consensus 863 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~ 926 (947)
. ..... ...+..+...+.+++.+||..+|++||++.+++..+.++...+..
T Consensus 224 ~----~~~~~---------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~~~ 274 (316)
T cd05108 224 L----EKGER---------LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR 274 (316)
T ss_pred H----hCCCC---------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCCch
Confidence 1 11111 011122345688999999999999999999999999987765543
No 65
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1.1e-36 Score=326.76 Aligned_cols=257 Identities=25% Similarity=0.368 Sum_probs=204.6
Q ss_pred hccCCcccccccCceeEEEEEeCC----CcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcccccc
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLNS----GKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNV 704 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 704 (947)
++|++.+.||+|+||+||+|.++. ...||||.+.... .......|.+|+.++++++||||
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~----------------~~~~~~~~~~e~~~l~~l~h~~i 67 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS----------------SDKQRLDFLTEASIMGQFDHPNI 67 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC----------------ChHHHHHHHHHHHHHHhCCCCCc
Confidence 578899999999999999999752 4579999874211 11234568899999999999999
Q ss_pred ceEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCC
Q 002250 705 VKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEW 784 (947)
Q Consensus 705 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~ 784 (947)
+++++++...+..++||||+++++|.+++.... ..+++..+..++.|++.|++||| +.+|+||||||+||++++++
T Consensus 68 ~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~di~p~nili~~~~ 143 (266)
T cd05033 68 IRLEGVVTKSRPVMIITEYMENGSLDKFLREND-GKFTVGQLVGMLRGIASGMKYLS---EMNYVHRDLAARNILVNSNL 143 (266)
T ss_pred ceEeEEEecCCceEEEEEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCC
Confidence 999999999999999999999999999997643 36899999999999999999999 89999999999999999999
Q ss_pred CeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHH
Q 002250 785 KPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNWV 863 (947)
Q Consensus 785 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~ 863 (947)
.++|+|||+++...............++..|+|||.+....++.++||||||+++|||++ |..||... ....+....
T Consensus 144 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~--~~~~~~~~~ 221 (266)
T cd05033 144 VCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDM--SNQDVIKAV 221 (266)
T ss_pred CEEECccchhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCC--CHHHHHHHH
Confidence 999999999987652222111112235678999999998889999999999999999998 99998432 111111111
Q ss_pred HhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 002250 864 YSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEA 920 (947)
Q Consensus 864 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 920 (947)
.... ..+.+...+..+.+++.+|++.+|++||++.|++++|+++
T Consensus 222 ----~~~~---------~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 222 ----EDGY---------RLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred ----HcCC---------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 1110 0111223456788999999999999999999999999875
No 66
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.7e-37 Score=332.88 Aligned_cols=254 Identities=25% Similarity=0.323 Sum_probs=216.0
Q ss_pred hhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccce
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVK 706 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 706 (947)
.+.|...+.+|+|+||.++.++.+ +++.+++|.+...... .........|+.+++++.|||||.
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t---------------~~~r~~A~~E~~lis~~~hP~iv~ 67 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLT---------------EPERRSAIQEMDLLSKLLHPNIVE 67 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccC---------------chhhHHHHHHHHHHHhccCCCeee
Confidence 367888999999999999999966 6889999998533221 122236778999999999999999
Q ss_pred EEEEEecCCc-cEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCC
Q 002250 707 LYCSITSEDS-NLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWK 785 (947)
Q Consensus 707 l~~~~~~~~~-~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~ 785 (947)
+++.|.+++. .+|||+|++||++.+.+.+..+..+++....+++.|++.|++||| +..|+|||||+.||+++.++.
T Consensus 68 y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH---~~~iLHRDlK~~Nifltk~~~ 144 (426)
T KOG0589|consen 68 YKDSFEEDGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLH---ENRVLHRDLKCANIFLTKDKK 144 (426)
T ss_pred eccchhcCCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH---hhhhhcccchhhhhhccccCc
Confidence 9999999998 899999999999999999887788999999999999999999999 899999999999999999999
Q ss_pred eEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHh
Q 002250 786 PRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYS 865 (947)
Q Consensus 786 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~ 865 (947)
|+|+|||+|+....... ....++||+-||.||.+.+..|..|+||||+||++|||++-+++|... +....+.+
T Consensus 145 VkLgDfGlaK~l~~~~~--~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~-----~m~~Li~k 217 (426)
T KOG0589|consen 145 VKLGDFGLAKILNPEDS--LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKAS-----NMSELILK 217 (426)
T ss_pred eeecchhhhhhcCCchh--hhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCcc-----chHHHHHH
Confidence 99999999998876652 234578999999999999999999999999999999999999999532 33333322
Q ss_pred hccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 866 KMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 866 ~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
..+. ...+.+.....++..++..|++.+|+.||++.+++.+
T Consensus 218 i~~~----------~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 218 INRG----------LYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred Hhhc----------cCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 2222 2344556667788999999999999999999999976
No 67
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=8.1e-37 Score=336.92 Aligned_cols=245 Identities=24% Similarity=0.275 Sum_probs=195.4
Q ss_pred ccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEEEEec
Q 002250 635 NLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYCSITS 713 (947)
Q Consensus 635 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 713 (947)
+.||+|+||.||+|+.+ +|+.||||++.... .........+.+|+.++++++||||+++++++..
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~--------------~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~ 66 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEV--------------IIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQT 66 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHH--------------hhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEc
Confidence 46899999999999965 78999999984211 0111234567789999999999999999999999
Q ss_pred CCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEecccc
Q 002250 714 EDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFGL 793 (947)
Q Consensus 714 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 793 (947)
++..++||||+++|+|.+++... ..+++.....++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+
T Consensus 67 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DfG~ 141 (323)
T cd05571 67 HDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALGYLH---SCDVVYRDLKLENLMLDKDGHIKITDFGL 141 (323)
T ss_pred CCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEeeCCC
Confidence 99999999999999999999863 45788999999999999999999 89999999999999999999999999999
Q ss_pred ceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhccccccc
Q 002250 794 AKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDSRDSM 873 (947)
Q Consensus 794 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 873 (947)
++...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||... +............
T Consensus 142 a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~-----~~~~~~~~~~~~~--- 211 (323)
T cd05571 142 CKEGISDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ-----DHEKLFELILMEE--- 211 (323)
T ss_pred CcccccCC--CcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCC-----CHHHHHHHHHcCC---
Confidence 87532221 1123456999999999999989999999999999999999999998532 1111111111111
Q ss_pred cccccCCCCccCHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 002250 874 LTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRP-----SMRVVVQM 916 (947)
Q Consensus 874 ~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~ev~~~ 916 (947)
..++......+.+++.+|++.||++|| ++.+++++
T Consensus 212 --------~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 212 --------IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred --------CCCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence 111223345678899999999999999 78888753
No 68
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=2.8e-36 Score=322.94 Aligned_cols=255 Identities=27% Similarity=0.378 Sum_probs=205.2
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
..|.+.+.||+|+||.||+|... .++.||+|.+... ......+.+|++++++++||||+++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~------------------~~~~~~~~~e~~~l~~l~h~~i~~~ 67 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED------------------TMEVEEFLKEAAVMKEIKHPNLVQL 67 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC------------------chHHHHHHHHHHHHHhCCCCChhhe
Confidence 45778889999999999999965 5889999987311 1234568899999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
++++..++..++||||+++++|.+++.......+++..++.++.|++.||+||| +.+++||||||+||++++++.+|
T Consensus 68 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~k 144 (263)
T cd05052 68 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVK 144 (263)
T ss_pred EEEEcCCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCcEE
Confidence 999999999999999999999999998766667899999999999999999999 89999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHhh
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNWVYSK 866 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~ 866 (947)
|+|||.+......... ......++..|+|||.+.+..++.++|||||||++|||++ |..||... +..+....
T Consensus 145 l~df~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~-----~~~~~~~~- 217 (263)
T cd05052 145 VADFGLSRLMTGDTYT-AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI-----DLSQVYEL- 217 (263)
T ss_pred eCCCccccccccceee-ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHH-
Confidence 9999999765443211 1112234568999999988889999999999999999998 88887432 11111111
Q ss_pred ccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 002250 867 MDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEA 920 (947)
Q Consensus 867 ~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 920 (947)
...... .+.+...+..+.+++.+|++.+|++|||+.++.++|+.+
T Consensus 218 ~~~~~~---------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 218 LEKGYR---------MERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred HHCCCC---------CCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 111100 112223456788999999999999999999999999864
No 69
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=6.8e-37 Score=330.43 Aligned_cols=258 Identities=20% Similarity=0.326 Sum_probs=201.9
Q ss_pred hhccCCcccccccCceeEEEEEeC------CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccc
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLN------SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRH 701 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 701 (947)
.++|++.+.||+|+||.||+|... .+..||||++.... ......++.+|+.+++.++|
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~----------------~~~~~~~~~~e~~~l~~l~~ 68 (277)
T cd05062 5 REKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA----------------SMRERIEFLNEASVMKEFNC 68 (277)
T ss_pred HHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC----------------CHHHHHHHHHHHHHHHhCCC
Confidence 477999999999999999998753 25679999873110 01123568899999999999
Q ss_pred cccceEEEEEecCCccEEEEeccCCCChHHHhhhcC--------CccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccC
Q 002250 702 VNVVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCH--------KIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDV 773 (947)
Q Consensus 702 ~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~--------~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dl 773 (947)
|||+++++++..+...++||||+++++|.+++.... ....++..+..++.|++.|++||| +.+++||||
T Consensus 69 ~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~vH~dl 145 (277)
T cd05062 69 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLN---ANKFVHRDL 145 (277)
T ss_pred CCeeeEEEEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCc
Confidence 999999999999999999999999999999997532 124678889999999999999999 889999999
Q ss_pred CCCCeEecCCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 002250 774 KSSNILLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPE 852 (947)
Q Consensus 774 kp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~ 852 (947)
||+||++++++.++|+|||+++...............++..|+|||++..+.++.++|||||||++|||++ |..||...
T Consensus 146 kp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~ 225 (277)
T cd05062 146 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGM 225 (277)
T ss_pred chheEEEcCCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCC
Confidence 99999999999999999999875543322111112345788999999998889999999999999999999 67887432
Q ss_pred CCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhc
Q 002250 853 FGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEE 919 (947)
Q Consensus 853 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~ 919 (947)
. ....... .... .....+...+..+.+++.+|++.+|++|||+.|++++|++
T Consensus 226 ~--~~~~~~~---~~~~----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 226 S--NEQVLRF---VMEG----------GLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred C--HHHHHHH---HHcC----------CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 1 1111111 1111 1111222345578899999999999999999999999874
No 70
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-37 Score=297.63 Aligned_cols=262 Identities=25% Similarity=0.322 Sum_probs=205.3
Q ss_pred hccCCcccccccCceeEEEEE-eCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVV-LNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
++|++.+.+|+|||+-||.++ ..+++.+|+|++. . ...++.+...+|++..++++|||++++
T Consensus 21 ~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~----------------c-~~~~~~e~~~rEid~~rkf~s~~vl~l 83 (302)
T KOG2345|consen 21 KRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKIL----------------C-HSQEDIEEALREIDNHRKFNSPNVLRL 83 (302)
T ss_pred ceEEEeeeecCCCceeeeeecccCcccchhhheee----------------c-cchHHHHHHHHHHHHHHhhCCcchHHH
Confidence 689999999999999999999 6789999999982 1 113456778899999999999999999
Q ss_pred EEEEecCC-----ccEEEEeccCCCChHHHhhhc--CCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEe
Q 002250 708 YCSITSED-----SNLLVYEYLPNGSLWDRLHTC--HKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILL 780 (947)
Q Consensus 708 ~~~~~~~~-----~~~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll 780 (947)
+++...+. ..|++++|...|+|.+.+... ++..+++.+.++++.+|++||++||.. ..+++||||||.||++
T Consensus 84 ~dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILl 162 (302)
T KOG2345|consen 84 VDHQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILL 162 (302)
T ss_pred HHHHHHhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEe
Confidence 98875543 379999999999999999765 445789999999999999999999932 3459999999999999
Q ss_pred cCCCCeEEeccccceecccCCCCcc-------eecccccccccCccccc---cCCCCCccchHHHHHHHHHHHhCCCCCC
Q 002250 781 DLEWKPRIADFGLAKIVQTGEAGDL-------THVIAGTHGYIAPEYAY---TCKINEKSDVYSFGVVLMELVTGKRPIV 850 (947)
Q Consensus 781 ~~~~~~kl~DfG~a~~~~~~~~~~~-------~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slGv~l~elltg~~p~~ 850 (947)
++++.+++.|||.++..+-...... ......|.-|.|||.+. +...++++|||||||++|+|+.|..||.
T Consensus 163 s~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe 242 (302)
T KOG2345|consen 163 SDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFE 242 (302)
T ss_pred cCCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcch
Confidence 9999999999999875432111100 11123688899999874 4557899999999999999999999996
Q ss_pred CCCCCcccHHHHHHhhccccccccccccCCC-CccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccC
Q 002250 851 PEFGDSKDIVNWVYSKMDSRDSMLTVVDPNI-SEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAE 921 (947)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~ 921 (947)
..++.++ ..-..+..+.+ .+.....++.+.+++.+|++.||.+||++.+++..++.+-
T Consensus 243 ~~~~~Gg-------------SlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 243 RIYQQGG-------------SLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred HHhhcCC-------------eEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 4433222 11122333222 1111125667889999999999999999999999987653
No 71
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1e-36 Score=330.11 Aligned_cols=258 Identities=24% Similarity=0.382 Sum_probs=203.6
Q ss_pred hccCCcccccccCceeEEEEEe-----CCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccc
Q 002250 629 DAVKPENLIGKGGSGNVYKVVL-----NSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVN 703 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n 703 (947)
+.|++.+.||+|+||.||+|.. .+++.||+|.+.... .......+.+|+.++++++|||
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~----------------~~~~~~~~~~E~~~l~~l~h~n 68 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN----------------NPQQWGEFQQEASLMAELHHPN 68 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC----------------CHHHHHHHHHHHHHHhhCCCCC
Confidence 5678889999999999999984 246789999883111 1122356889999999999999
Q ss_pred cceEEEEEecCCccEEEEeccCCCChHHHhhhcC---------------CccCCHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 002250 704 VVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCH---------------KIEMDWVVRYAIAVGAAKGLEYLHHGFDRPV 768 (947)
Q Consensus 704 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~i 768 (947)
|+++++++..+...++||||+++++|.+++.... ...+++.....++.|++.||+||| +.++
T Consensus 69 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i 145 (283)
T cd05090 69 IVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLS---SHFF 145 (283)
T ss_pred eeeEEEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hcCe
Confidence 9999999999999999999999999999986321 234788899999999999999999 8899
Q ss_pred EeccCCCCCeEecCCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCC
Q 002250 769 IHRDVKSSNILLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKR 847 (947)
Q Consensus 769 vH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~ 847 (947)
+||||||+||++++++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |..
T Consensus 146 ~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~ 225 (283)
T cd05090 146 VHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQ 225 (283)
T ss_pred ehhccccceEEEcCCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCC
Confidence 9999999999999999999999999986544332222223446778999999988889999999999999999999 888
Q ss_pred CCCCCCCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 002250 848 PIVPEFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEA 920 (947)
Q Consensus 848 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 920 (947)
||.... ...+.+.+. .... ...+...+..+.+++.+|++.||++||++.++.++|+++
T Consensus 226 p~~~~~--~~~~~~~~~----~~~~---------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05090 226 PYYGFS--NQEVIEMVR----KRQL---------LPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRSW 283 (283)
T ss_pred CCCCCC--HHHHHHHHH----cCCc---------CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhcC
Confidence 884321 112222211 1111 112223445688899999999999999999999998763
No 72
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.4e-36 Score=323.63 Aligned_cols=252 Identities=24% Similarity=0.319 Sum_probs=201.7
Q ss_pred hccCCcccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
++|++.+.||+|+||+||+|...++..+|||.+... ......+.+|+.++++++||||++++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~------------------~~~~~~~~~e~~~l~~l~h~~i~~~~ 65 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG------------------SMSEDEFIEEAKVMMKLSHEKLVQLY 65 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCC------------------cccHHHHHHHHHHHhcCCCCCeeeEE
Confidence 467888999999999999999887778999987311 12245688999999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRI 788 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 788 (947)
+++...+..++||||+++|+|.+++..... .+++..++.++.|++.|++||| +.+++|+||||+||++++++.+||
T Consensus 66 ~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl 141 (256)
T cd05113 66 GVCTKQRPIYIVTEYMSNGCLLNYLREHGK-RFQPSQLLEMCKDVCEGMAYLE---SKQFIHRDLAARNCLVDDQGCVKV 141 (256)
T ss_pred EEEccCCCcEEEEEcCCCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCCEEE
Confidence 999999999999999999999999976433 6899999999999999999999 899999999999999999999999
Q ss_pred eccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhc
Q 002250 789 ADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNWVYSKM 867 (947)
Q Consensus 789 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 867 (947)
+|||.++........ ......++..|+|||+.....++.++||||||+++|||++ |+.||.... ...... ...
T Consensus 142 ~d~g~~~~~~~~~~~-~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~--~~~~~~---~~~ 215 (256)
T cd05113 142 SDFGLSRYVLDDEYT-SSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFN--NSETVE---KVS 215 (256)
T ss_pred CCCccceecCCCcee-ecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCC--HHHHHH---HHh
Confidence 999998765433211 1112235678999999988889999999999999999999 999984221 111111 111
Q ss_pred cccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 002250 868 DSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLE 918 (947)
Q Consensus 868 ~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~ 918 (947)
..... ..+......+.+++.+||+.+|++||++.++++.|+
T Consensus 216 ~~~~~----------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 216 QGLRL----------YRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred cCCCC----------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 11110 011122467889999999999999999999998874
No 73
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=3.6e-36 Score=332.94 Aligned_cols=263 Identities=24% Similarity=0.344 Sum_probs=201.7
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
++|++.+.||+|+||.||+|+.. ++..||+|++.... .......+.+|++++++++||||+++
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~----------------~~~~~~~~~~E~~~l~~l~h~~iv~~ 68 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI----------------KPAIRNQIIRELQVLHECNSPYIVGF 68 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc----------------CHHHHHHHHHHHHHHHHCCCCCCCeE
Confidence 67889999999999999999966 68899999883210 11223568899999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
++++..++..++||||+++|+|.+++... ..+++.....++.|++.||+|||+ ..+|+||||||+||+++.++.+|
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~--~~~ivH~dlkp~Nil~~~~~~~k 144 (331)
T cd06649 69 YGAFYSDGEISICMEHMDGGSLDQVLKEA--KRIPEEILGKVSIAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIK 144 (331)
T ss_pred EEEEEECCEEEEEeecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhh--cCCEEcCCCChhhEEEcCCCcEE
Confidence 99999999999999999999999999864 357888999999999999999993 24699999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKM 867 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 867 (947)
|+|||++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..++........
T Consensus 145 l~Dfg~~~~~~~~~----~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~--~~~~~~~~~~~~ 218 (331)
T cd06649 145 LCDFGVSGQLIDSM----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPD--AKELEAIFGRPV 218 (331)
T ss_pred EccCcccccccccc----cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHhcccc
Confidence 99999987553322 223468999999999998889999999999999999999999995321 111111110000
Q ss_pred -ccccccc--------------------------------ccccCCCCcc-CHHHHHHHHHHHHhccCCCCCCCCCHHHH
Q 002250 868 -DSRDSML--------------------------------TVVDPNISEI-LKEDALKVLRIAIHCTNKLPAFRPSMRVV 913 (947)
Q Consensus 868 -~~~~~~~--------------------------------~~~d~~~~~~-~~~~~~~l~~l~~~cl~~dP~~RPt~~ev 913 (947)
....... .+.....+.. .......+.+++.+||+.||++|||+.|+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~el 298 (331)
T cd06649 219 VDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKML 298 (331)
T ss_pred cccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHH
Confidence 0000000 0000000010 11234568999999999999999999999
Q ss_pred HHHh
Q 002250 914 VQML 917 (947)
Q Consensus 914 ~~~L 917 (947)
+++-
T Consensus 299 l~h~ 302 (331)
T cd06649 299 MNHT 302 (331)
T ss_pred hcCh
Confidence 8753
No 74
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9.2e-37 Score=314.52 Aligned_cols=262 Identities=23% Similarity=0.265 Sum_probs=207.2
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
+.|+..+.||+|.-|+||.+++. ++..+|+|++..... .......+.+.|-+||+.++||.++.+
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l--------------~~rkKl~Ra~tE~eIL~~lDHPFlPTL 142 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESL--------------ASRKKLKRAQTEREILSLLDHPFLPTL 142 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHH--------------hhhhHHHHHHHHHHHHHhcCCCccchh
Confidence 56777889999999999999977 468999999942221 112445678889999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
|+.|+.+...|+|||||+||+|....+++....++.....-++..|+-||+||| ..|||+|||||+|||+.++|.+.
T Consensus 143 Ya~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLH---mlGivYRDLKPENILvredGHIM 219 (459)
T KOG0610|consen 143 YASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLH---MLGIVYRDLKPENILVREDGHIM 219 (459)
T ss_pred hheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHH---hhceeeccCCcceeEEecCCcEE
Confidence 999999999999999999999999999998888999999999999999999999 89999999999999999999999
Q ss_pred Eeccccceeccc---------------------------------C-CC--------------------Ccceecccccc
Q 002250 788 IADFGLAKIVQT---------------------------------G-EA--------------------GDLTHVIAGTH 813 (947)
Q Consensus 788 l~DfG~a~~~~~---------------------------------~-~~--------------------~~~~~~~~gt~ 813 (947)
|+||.++..... . .. ......++||-
T Consensus 220 LsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGTh 299 (459)
T KOG0610|consen 220 LSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTH 299 (459)
T ss_pred eeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCcccccccccc
Confidence 999998742210 0 00 01122457999
Q ss_pred cccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHH
Q 002250 814 GYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVL 893 (947)
Q Consensus 814 ~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~ 893 (947)
.|.|||++.+...+.++|.|+|||++|||+.|+.||.+... .+.+...+.+. ..+++.+ +....+.
T Consensus 300 EYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~-~~Tl~NIv~~~------------l~Fp~~~-~vs~~ak 365 (459)
T KOG0610|consen 300 EYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNN-KETLRNIVGQP------------LKFPEEP-EVSSAAK 365 (459)
T ss_pred ccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCc-hhhHHHHhcCC------------CcCCCCC-cchhHHH
Confidence 99999999999999999999999999999999999965432 22222222111 1122222 4556788
Q ss_pred HHHHhccCCCCCCCCCHHHHHHHhhccC
Q 002250 894 RIAIHCTNKLPAFRPSMRVVVQMLEEAE 921 (947)
Q Consensus 894 ~l~~~cl~~dP~~RPt~~ev~~~L~~~~ 921 (947)
++|++.+.+||.+|.....=...+++..
T Consensus 366 DLIr~LLvKdP~kRlg~~rGA~eIK~Hp 393 (459)
T KOG0610|consen 366 DLIRKLLVKDPSKRLGSKRGAAEIKRHP 393 (459)
T ss_pred HHHHHHhccChhhhhccccchHHhhcCc
Confidence 9999999999999998333333344433
No 75
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.7e-36 Score=329.69 Aligned_cols=262 Identities=23% Similarity=0.280 Sum_probs=195.2
Q ss_pred ccCCcccccccCceeEEEEEeC--CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc---ccccc
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN--SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV---RHVNV 704 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l---~h~ni 704 (947)
+|++.+.||+|+||+||+|+.. +++.||||++..... .......+.+|+.+++.+ +||||
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~---------------~~~~~~~~~~e~~~l~~l~~~~hpni 66 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTG---------------EEGMPLSTIREVAVLRHLETFEHPNV 66 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccC---------------CCCchHHHHHHHHHHHhhcccCCCCc
Confidence 6888999999999999999863 468899998842211 112224456777777766 69999
Q ss_pred ceEEEEEec-----CCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeE
Q 002250 705 VKLYCSITS-----EDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNIL 779 (947)
Q Consensus 705 v~l~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIl 779 (947)
+++++++.. ....++||||++ ++|.+++.......+++..+..++.|++.||+||| +.+|+||||||+||+
T Consensus 67 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~iiH~dlkp~Nil 142 (290)
T cd07862 67 VRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNIL 142 (290)
T ss_pred ceEEEEEecccCCCCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEE
Confidence 999999853 445789999996 69999998765566899999999999999999999 899999999999999
Q ss_pred ecCCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccH
Q 002250 780 LDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDI 859 (947)
Q Consensus 780 l~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~ 859 (947)
++.++.+||+|||+++...... ......||+.|+|||++....++.++|||||||++|||++|+.||..... .+.
T Consensus 143 ~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~--~~~ 217 (290)
T cd07862 143 VTSSGQIKLADFGLARIYSFQM---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD--VDQ 217 (290)
T ss_pred EcCCCCEEEccccceEeccCCc---ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCH--HHH
Confidence 9999999999999998654332 22345689999999999888899999999999999999999999864321 111
Q ss_pred HHHHHhhcc--ccccc-------cccccCC----CCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 860 VNWVYSKMD--SRDSM-------LTVVDPN----ISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 860 ~~~~~~~~~--~~~~~-------~~~~d~~----~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
......... ....+ ...+.+. +.....+....+.+++.+|++.||++|||+.|+++
T Consensus 218 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 218 LGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred HHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 111111000 00000 0001100 01112233456789999999999999999999985
No 76
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.1e-36 Score=325.92 Aligned_cols=256 Identities=23% Similarity=0.368 Sum_probs=208.7
Q ss_pred hhccCCcccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
..+|++.+.||.|+||.||+|...+++.+|+|++... .......+.+|+.+++.++||||+++
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~-----------------~~~~~~~~~~e~~~l~~l~~~~i~~~ 67 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSD-----------------DLLKQQDFQKEVQALKRLRHKHLISL 67 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecCCCcEEEEecccc-----------------chhhHHHHHHHHHHHhcCCCcchhhe
Confidence 3578889999999999999999888999999987321 11234578899999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
++++...+..++||||+++++|.++++......+++..+..++.|++.|++||| +.+++||||+|+||++++++.+|
T Consensus 68 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~h~dl~~~nilv~~~~~~k 144 (261)
T cd05148 68 FAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLE---EQNSIHRDLAARNILVGEDLVCK 144 (261)
T ss_pred eeeEecCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccCcceEEEcCCceEE
Confidence 999999999999999999999999998766667899999999999999999999 89999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHhh
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNWVYSK 866 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~ 866 (947)
|+|||.+......... .....++..|+|||+.....++.++||||||+++|||++ |+.||.... .........
T Consensus 145 l~d~g~~~~~~~~~~~--~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~--~~~~~~~~~-- 218 (261)
T cd05148 145 VADFGLARLIKEDVYL--SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMN--NHEVYDQIT-- 218 (261)
T ss_pred EccccchhhcCCcccc--ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCC--HHHHHHHHH--
Confidence 9999999765433211 112345678999999988889999999999999999998 888984321 111222111
Q ss_pred ccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 002250 867 MDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEA 920 (947)
Q Consensus 867 ~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 920 (947)
... ....+...+..+.+++.+|++.||++|||+.++.+.|+.+
T Consensus 219 -~~~----------~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 219 -AGY----------RMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred -hCC----------cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 110 0112233446688999999999999999999999999864
No 77
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-38 Score=300.98 Aligned_cols=253 Identities=25% Similarity=0.312 Sum_probs=202.6
Q ss_pred hhccCCcccccccCceeEEEEEe-CCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccce
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVL-NSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVK 706 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 706 (947)
.+.|++.+.||+|.|+.||++.. ++|+.+|+|.+.. ........+++++|+.|.+.++|||||+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~---------------~k~~~~~~e~l~rEarIC~~LqHP~Ivr 74 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINT---------------KKLSARDFQKLEREARICRKLQHPNIVR 74 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhh---------------hhhccccHHHHHHHHHHHHhcCCCcEee
Confidence 46788889999999999999884 4799999998831 2223346788999999999999999999
Q ss_pred EEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecC---C
Q 002250 707 LYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDL---E 783 (947)
Q Consensus 707 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~---~ 783 (947)
+.+.+.+....|+|+|+|+|++|..-+-.. ...++...-....||+.++.|+| .++|||||+||+|+++.. .
T Consensus 75 L~~ti~~~~~~ylvFe~m~G~dl~~eIV~R--~~ySEa~aSH~~rQiLeal~yCH---~n~IvHRDvkP~nllLASK~~~ 149 (355)
T KOG0033|consen 75 LHDSIQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILEALAYCH---SNGIVHRDLKPENLLLASKAKG 149 (355)
T ss_pred hhhhhcccceeEEEEecccchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeeeeccCC
Confidence 999999999999999999999998766542 44677777788999999999999 899999999999999963 3
Q ss_pred CCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHH
Q 002250 784 WKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWV 863 (947)
Q Consensus 784 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~ 863 (947)
.-+|++|||+|..+..+. .....+|||+|||||+++..+|+..+|||+.||++|-++.|..||.+. +..++.+
T Consensus 150 A~vKL~~FGvAi~l~~g~---~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~--~~~rlye-- 222 (355)
T KOG0033|consen 150 AAVKLADFGLAIEVNDGE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE--DQHRLYE-- 222 (355)
T ss_pred CceeecccceEEEeCCcc---ccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCc--cHHHHHH--
Confidence 458999999999887332 233568999999999999999999999999999999999999999542 2222222
Q ss_pred HhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 864 YSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 864 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
........+ + +.......++..+++++|+..||.+|.|+.|.++
T Consensus 223 -~I~~g~yd~----~---~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 223 -QIKAGAYDY----P---SPEWDTVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred -HHhccccCC----C---CcccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 222222211 1 1122233445677888999999999999998774
No 78
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.5e-36 Score=336.56 Aligned_cols=255 Identities=20% Similarity=0.254 Sum_probs=201.7
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
+|++.+.||+|+||.||+|+.. +++.||||++.... .........+.+|++++..++||||++++
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--------------~~~~~~~~~~~~e~~~l~~~~h~~iv~~~ 67 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSL--------------LFKLNEVRHVLTERDILTTTKSEWLVKLL 67 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHH--------------HhhhhHHHHHHHHHHHHHhCCCCCCccEE
Confidence 5888999999999999999976 58999999983210 11123345688899999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRI 788 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 788 (947)
+++..++..|+||||+++|+|.+++... ..+++.....++.|++.||+||| +.+|+||||||+||+++.++.+||
T Consensus 68 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kL 142 (333)
T cd05600 68 YAFQDDEYLYLAMEYVPGGDFRTLLNNL--GVLSEDHARFYMAEMFEAVDALH---ELGYIHRDLKPENFLIDASGHIKL 142 (333)
T ss_pred EEEEcCCEEEEEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEE
Confidence 9999999999999999999999999763 35788889999999999999999 899999999999999999999999
Q ss_pred eccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcc
Q 002250 789 ADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMD 868 (947)
Q Consensus 789 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 868 (947)
+|||++..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+...... .
T Consensus 143 ~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~--~~~~~~~i~---~ 212 (333)
T cd05600 143 TDFGLSKGIVT-----YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGST--PNETWENLK---Y 212 (333)
T ss_pred EeCcCCccccc-----ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCC--HHHHHHHHH---h
Confidence 99999975543 1224568999999999998899999999999999999999999985321 111111111 1
Q ss_pred ccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 869 SRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 869 ~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
...... .+............+.+++.+|+..+|.+||++.+++++
T Consensus 213 ~~~~~~---~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 213 WKETLQ---RPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred cccccc---CCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 010000 011111112334567889999999999999999999975
No 79
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-37 Score=335.37 Aligned_cols=260 Identities=26% Similarity=0.370 Sum_probs=211.2
Q ss_pred hccCCcccccccCceeEEEEEeC--CCc--EEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcccccc
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN--SGK--ELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNV 704 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~--~~~--~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 704 (947)
++.+..+.||+|+||+|++|.|. +|+ .||||.+..+... ....+|.+|+.+|.+|+|||+
T Consensus 110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~----------------~~mddflrEas~M~~L~H~hl 173 (1039)
T KOG0199|consen 110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLN----------------AIMDDFLREASHMLKLQHPHL 173 (1039)
T ss_pred HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccc----------------hhHHHHHHHHHHHHhccCcce
Confidence 34556788999999999999976 344 5899999543321 256789999999999999999
Q ss_pred ceEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCC
Q 002250 705 VKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEW 784 (947)
Q Consensus 705 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~ 784 (947)
+++||+..+ ....||||.++.|+|.+.+++.....+-......++.|||.||.||. +++.|||||.++|+++...-
T Consensus 174 iRLyGvVl~-qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLe---skrlvHRDLAARNlllaspr 249 (1039)
T KOG0199|consen 174 IRLYGVVLD-QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLE---SKRLVHRDLAARNLLLASPR 249 (1039)
T ss_pred eEEeeeecc-chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhhhheecccc
Confidence 999999988 67889999999999999999866777889999999999999999999 99999999999999999999
Q ss_pred CeEEeccccceecccCCCCcc-eecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHH
Q 002250 785 KPRIADFGLAKIVQTGEAGDL-THVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNW 862 (947)
Q Consensus 785 ~~kl~DfG~a~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~ 862 (947)
.+||+|||+++-+...+.... .....-.+.|+|||.++...++.++|||+|||++|||+| |..||.+-. -...
T Consensus 250 tVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~-----g~qI 324 (1039)
T KOG0199|consen 250 TVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCR-----GIQI 324 (1039)
T ss_pred eeeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCC-----HHHH
Confidence 999999999998766544322 122234578999999999999999999999999999999 788974321 1111
Q ss_pred HHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCCC
Q 002250 863 VYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAEPC 923 (947)
Q Consensus 863 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 923 (947)
+..+-+.+.-+-++.+++.++++|..||...|++|||+..+.+.+-..++.
T Consensus 325 ----------L~~iD~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~l~eaq 375 (1039)
T KOG0199|consen 325 ----------LKNIDAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVLAEAQ 375 (1039)
T ss_pred ----------HHhccccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHHHHhcC
Confidence 111222333455667888999999999999999999999998555444433
No 80
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=3e-36 Score=327.07 Aligned_cols=263 Identities=21% Similarity=0.278 Sum_probs=197.3
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
++|.+.+.||+|+||+||+|+.. +++.||+|++.... .......+.+|+.++++++||||+++
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----------------~~~~~~~~~~E~~~l~~l~h~niv~~ 68 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEH----------------EEGAPCTAIREVSLLKNLKHANIVTL 68 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccc----------------cCCcchhHHHHHHHHHhCCCCCEeeE
Confidence 56888999999999999999965 68999999984211 11223457789999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
++++..++..++||||++ ++|.+++.... ..+++.....++.|++.||+||| +.+|+||||||+||+++.++.+|
T Consensus 69 ~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~k 143 (288)
T cd07871 69 HDIIHTERCLTLVFEYLD-SDLKQYLDNCG-NLMSMHNVKIFMFQLLRGLSYCH---KRKILHRDLKPQNLLINEKGELK 143 (288)
T ss_pred EEEEcCCCeEEEEEeCCC-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEE
Confidence 999999999999999997 48999887643 35788889999999999999999 89999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYT-CKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSK 866 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 866 (947)
|+|||+++....... ......+++.|+|||++.+ ..++.++||||+||++|||++|+.||.... ..+........
T Consensus 144 l~DfG~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~--~~~~~~~~~~~ 219 (288)
T cd07871 144 LADFGLARAKSVPTK--TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGST--VKEELHLIFRL 219 (288)
T ss_pred ECcCcceeeccCCCc--cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHH
Confidence 999999976433221 1223467899999998875 458899999999999999999999985432 11111111111
Q ss_pred cc-----------ccccccccccCCCC-----ccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 867 MD-----------SRDSMLTVVDPNIS-----EILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 867 ~~-----------~~~~~~~~~d~~~~-----~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
.. ....+.....+... ........+..+++.+|++.||.+|||+.|++++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 220 LGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred hCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00 00000000111100 0011223457889999999999999999999853
No 81
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=4.4e-36 Score=324.22 Aligned_cols=264 Identities=21% Similarity=0.311 Sum_probs=203.7
Q ss_pred hccCCcccccccCceeEEEEEeC-CCc----EEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccc
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGK----ELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVN 703 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n 703 (947)
++|+..+.||+|+||+||+|.+. +++ .+|+|.+... .......++..|+.++++++|||
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~----------------~~~~~~~~~~~~~~~l~~l~h~~ 70 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR----------------SGRQTFQEITDHMLAMGSLDHAY 70 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc----------------cchHHHHHHHHHHHHHhcCCCCC
Confidence 56788899999999999999964 454 4677765210 01123456788899999999999
Q ss_pred cceEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCC
Q 002250 704 VVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLE 783 (947)
Q Consensus 704 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~ 783 (947)
|+++++++.. ...++++||+++|+|.+++... ...+++.....++.|++.||+||| +.+++||||||+||+++++
T Consensus 71 iv~~~~~~~~-~~~~~i~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~ 145 (279)
T cd05111 71 IVRLLGICPG-ASLQLVTQLSPLGSLLDHVRQH-RDSLDPQRLLNWCVQIAKGMYYLE---EHRMVHRNLAARNILLKSD 145 (279)
T ss_pred cceEEEEECC-CccEEEEEeCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCC
Confidence 9999998764 5578999999999999999763 346899999999999999999999 8899999999999999999
Q ss_pred CCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHH
Q 002250 784 WKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNW 862 (947)
Q Consensus 784 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~ 862 (947)
+.+||+|||+++...............++..|+|||++..+.++.++||||||+++||+++ |+.||.... .....+.
T Consensus 146 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~--~~~~~~~ 223 (279)
T cd05111 146 SIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMR--PHEVPDL 223 (279)
T ss_pred CcEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCC--HHHHHHH
Confidence 9999999999987654432222233457789999999998899999999999999999998 999985321 1112222
Q ss_pred HHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCCCCccee
Q 002250 863 VYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAEPCSVTNI 928 (947)
Q Consensus 863 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~~~ 928 (947)
. ..... ...+..+...+.+++.+||..+|++|||+.|+.+.|+.+...|...+
T Consensus 224 ~----~~~~~---------~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~~~~~ 276 (279)
T cd05111 224 L----EKGER---------LAQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARDPPRYL 276 (279)
T ss_pred H----HCCCc---------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCCccee
Confidence 1 11111 00111123457788999999999999999999999998776554443
No 82
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=2.2e-36 Score=326.09 Aligned_cols=256 Identities=23% Similarity=0.254 Sum_probs=199.3
Q ss_pred ccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEEEEecCC
Q 002250 637 IGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYCSITSED 715 (947)
Q Consensus 637 iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 715 (947)
||+|+||+||+++.+ +|+.||+|++.... .........+..|++++++++||||+++++++..+.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~--------------~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~ 66 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKR--------------LKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKT 66 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHH--------------hhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCC
Confidence 699999999999965 68999999983211 011122344567999999999999999999999999
Q ss_pred ccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEeccccce
Q 002250 716 SNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFGLAK 795 (947)
Q Consensus 716 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 795 (947)
..++||||+++++|.+++.......+++..+..++.|++.|++||| +.+|+||||||+||+++.++.++|+|||++.
T Consensus 67 ~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~ 143 (277)
T cd05607 67 HLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLH---SMDIVYRDMKPENVLLDDQGNCRLSDLGLAV 143 (277)
T ss_pred eEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEEEccCChHhEEEcCCCCEEEeeceeee
Confidence 9999999999999999987766667899999999999999999999 8999999999999999999999999999997
Q ss_pred ecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhccccccccc
Q 002250 796 IVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDSRDSMLT 875 (947)
Q Consensus 796 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 875 (947)
....... .....|+..|+|||++.+..++.++||||+||++|||++|+.||..... ..............
T Consensus 144 ~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~-~~~~~~~~~~~~~~------ 213 (277)
T cd05607 144 ELKDGKT---ITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKE-KVAKEELKRRTLED------ 213 (277)
T ss_pred ecCCCce---eeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcc-hhhHHHHHHHhhcc------
Confidence 6543321 2234689999999999988899999999999999999999999853211 11111111111111
Q ss_pred cccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCCC
Q 002250 876 VVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAEPC 923 (947)
Q Consensus 876 ~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 923 (947)
............+.+++.+|++.||++||+++|+++........
T Consensus 214 ----~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f 257 (277)
T cd05607 214 ----EVKFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFF 257 (277)
T ss_pred ----ccccccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhh
Confidence 11001112344578899999999999999998887666654444
No 83
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6e-37 Score=312.56 Aligned_cols=266 Identities=22% Similarity=0.270 Sum_probs=201.8
Q ss_pred HhhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccc
Q 002250 627 IIDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVV 705 (947)
Q Consensus 627 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 705 (947)
+...|...+.||+|+||.|++|..+ +|+.||||++.. ........++..+|++.++.++|+||+
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~---------------~F~~~~~akRtlRElklLr~~~HeNIi 84 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILN---------------PFENQIDAKRTLRELKLLRHLRHENII 84 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhh---------------hhhchHHHHHHHHHHHHHHHhcCCCcc
Confidence 3455666789999999999999955 799999999831 122334556778999999999999999
Q ss_pred eEEEEEec-----CCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEe
Q 002250 706 KLYCSITS-----EDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILL 780 (947)
Q Consensus 706 ~l~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll 780 (947)
.+++.+.. -...|+|+|+| +.+|...++.. ..++..+..-+..|+++||.|+| +.+|+|||+||+|+++
T Consensus 85 ~l~di~~p~~~~~f~DvYiV~elM-etDL~~iik~~--~~L~d~H~q~f~YQiLrgLKyiH---SAnViHRDLKPsNll~ 158 (359)
T KOG0660|consen 85 GLLDIFRPPSRDKFNDVYLVFELM-ETDLHQIIKSQ--QDLTDDHAQYFLYQILRGLKYIH---SANVIHRDLKPSNLLL 158 (359)
T ss_pred eEEeecccccccccceeEEehhHH-hhHHHHHHHcC--ccccHHHHHHHHHHHHHhcchhh---cccccccccchhheee
Confidence 99999866 45679999999 66899999873 44888899999999999999999 9999999999999999
Q ss_pred cCCCCeEEeccccceecccCCCCcceecccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCCC-----
Q 002250 781 DLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYT-CKINEKSDVYSFGVVLMELVTGKRPIVPEFG----- 854 (947)
Q Consensus 781 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~----- 854 (947)
+.+...||+|||+|+...........+..+.|.+|.|||++.. ..|+.+.||||.||++.||++|++-|.+...
T Consensus 159 n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~ 238 (359)
T KOG0660|consen 159 NADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQ 238 (359)
T ss_pred ccCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHH
Confidence 9999999999999998865422333445678999999998864 4699999999999999999999998854320
Q ss_pred -------C-cccHHHHHH-----hhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 855 -------D-SKDIVNWVY-----SKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 855 -------~-~~~~~~~~~-----~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
. ..+....+. ..+... ...-...+........+..++++.+|+..||.+|+|+.|++++
T Consensus 239 lI~~~lGtP~~e~l~~i~s~~ar~yi~sl---p~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 239 LILELLGTPSEEDLQKIRSEKARPYIKSL---PQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred HHHHhcCCCCHHHHHHhccHHHHHHHHhC---CCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 0 001111000 000000 0000001122223445567889999999999999999999864
No 84
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.1e-36 Score=352.29 Aligned_cols=252 Identities=22% Similarity=0.307 Sum_probs=201.5
Q ss_pred hccCCcccccccCceeEEEEEeC-C-CcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccce
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-S-GKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVK 706 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 706 (947)
..|.+.+.||+|+||.||+|... + ++.||+|.+... .......+.+|+.+++.++|||||+
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~-----------------~~~~~~~~~~E~~~l~~l~Hpniv~ 129 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN-----------------DERQAAYARSELHCLAACDHFGIVK 129 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC-----------------CHHHHHHHHHHHHHHHhCCCCCEeE
Confidence 35888999999999999999854 4 678899876211 1122346778999999999999999
Q ss_pred EEEEEecCCccEEEEeccCCCChHHHhhhc--CCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCC
Q 002250 707 LYCSITSEDSNLLVYEYLPNGSLWDRLHTC--HKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEW 784 (947)
Q Consensus 707 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~ 784 (947)
+++++..++..|+||||+++|+|.++++.. ...++++.....++.|++.||+||| +.+|+||||||+||+++.++
T Consensus 130 ~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~~~~ 206 (478)
T PTZ00267 130 HFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVH---SRKMMHRDLKSANIFLMPTG 206 (478)
T ss_pred EEEEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCcCHHhEEECCCC
Confidence 999999999999999999999999988643 3456888999999999999999999 89999999999999999999
Q ss_pred CeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 002250 785 KPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVY 864 (947)
Q Consensus 785 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~ 864 (947)
.+||+|||+++..............+||+.|+|||++.+..++.++|||||||++|||++|+.||... ...+...
T Consensus 207 ~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~-----~~~~~~~ 281 (478)
T PTZ00267 207 IIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGP-----SQREIMQ 281 (478)
T ss_pred cEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC-----CHHHHHH
Confidence 99999999998765433222233457999999999999889999999999999999999999998432 1122222
Q ss_pred hhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 865 SKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 865 ~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
..... .....+......+.+++.+|++.||++||++.+++.
T Consensus 282 ~~~~~----------~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 282 QVLYG----------KYDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred HHHhC----------CCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 11111 111122233456889999999999999999999864
No 85
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.9e-36 Score=332.32 Aligned_cols=242 Identities=26% Similarity=0.319 Sum_probs=192.9
Q ss_pred ccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEEEEecCC
Q 002250 637 IGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYCSITSED 715 (947)
Q Consensus 637 iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 715 (947)
||+|+||.||+|+.. +++.||+|++.... .........+.+|+.++++++||||+++++++..++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~--------------~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 66 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAH--------------IVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPE 66 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHH--------------hhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCC
Confidence 699999999999965 68899999983110 011233456788999999999999999999999999
Q ss_pred ccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEeccccce
Q 002250 716 SNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFGLAK 795 (947)
Q Consensus 716 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 795 (947)
..++||||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.++|+|||+++
T Consensus 67 ~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~ 141 (312)
T cd05585 67 KLYLVLAFINGGELFHHLQRE--GRFDLSRARFYTAELLCALENLH---KFNVIYRDLKPENILLDYQGHIALCDFGLCK 141 (312)
T ss_pred eEEEEEcCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHeEECCCCcEEEEECcccc
Confidence 999999999999999999863 35888999999999999999999 8999999999999999999999999999997
Q ss_pred ecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhccccccccc
Q 002250 796 IVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDSRDSMLT 875 (947)
Q Consensus 796 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 875 (947)
....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||... +..+..........
T Consensus 142 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~-----~~~~~~~~~~~~~~---- 210 (312)
T cd05585 142 LNMKDDD--KTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDE-----NVNEMYRKILQEPL---- 210 (312)
T ss_pred cCccCCC--ccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCC-----CHHHHHHHHHcCCC----
Confidence 5432221 223456999999999999988999999999999999999999998532 22222222221111
Q ss_pred cccCCCCccCHHHHHHHHHHHHhccCCCCCCCCC---HHHHHH
Q 002250 876 VVDPNISEILKEDALKVLRIAIHCTNKLPAFRPS---MRVVVQ 915 (947)
Q Consensus 876 ~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt---~~ev~~ 915 (947)
.++......+.+++.+|++.||++||+ +.|+++
T Consensus 211 -------~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~ 246 (312)
T cd05585 211 -------RFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKN 246 (312)
T ss_pred -------CCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHc
Confidence 112233456788999999999999985 555554
No 86
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-36 Score=343.26 Aligned_cols=262 Identities=24% Similarity=0.318 Sum_probs=208.9
Q ss_pred ccCCcccccccCceeEEEEEeCCC-cEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcc-ccccceE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLNSG-KELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVR-HVNVVKL 707 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l 707 (947)
++++.+.|.+|||+.||.|+...+ .+||+|++. ...+.+.....+||++|++|+ |+|||.+
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~-----------------~~de~~L~~v~~EI~~MK~L~gh~nIV~y 100 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMY-----------------VNDEEALNAVKREIDIMKLLSGHKNIVSY 100 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEecCCCceeeeeeee-----------------cCCHHHHHHHHHHHHHHHHhcCCCceeeE
Confidence 466788999999999999997655 999999982 123455678899999999996 9999999
Q ss_pred EEE-Eec------CCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEe
Q 002250 708 YCS-ITS------EDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILL 780 (947)
Q Consensus 708 ~~~-~~~------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll 780 (947)
++. ... ..+++|.||||+||.|-|++.......+++..+++|+.|+++|+++||.. ..+|||||||-+|||+
T Consensus 101 idss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLl 179 (738)
T KOG1989|consen 101 IDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLL 179 (738)
T ss_pred eccccccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEE
Confidence 993 322 13467999999999999999876666699999999999999999999953 6779999999999999
Q ss_pred cCCCCeEEeccccceecccCCC-Ccc------eecccccccccCcccc---ccCCCCCccchHHHHHHHHHHHhCCCCCC
Q 002250 781 DLEWKPRIADFGLAKIVQTGEA-GDL------THVIAGTHGYIAPEYA---YTCKINEKSDVYSFGVVLMELVTGKRPIV 850 (947)
Q Consensus 781 ~~~~~~kl~DfG~a~~~~~~~~-~~~------~~~~~gt~~y~aPE~~---~~~~~~~~~Dv~slGv~l~elltg~~p~~ 850 (947)
+.++..||||||.|........ ... .-....|+.|+|||++ .+...++|+||||+||+||-++....||+
T Consensus 180 s~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe 259 (738)
T KOG1989|consen 180 SADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFE 259 (738)
T ss_pred cCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcC
Confidence 9999999999999864332221 000 1122368999999988 45568999999999999999999999995
Q ss_pred CCCCCcccHHHHHHhhccccccccccccCCC--CccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccC--CCCcc
Q 002250 851 PEFGDSKDIVNWVYSKMDSRDSMLTVVDPNI--SEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAE--PCSVT 926 (947)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~--~~~~~ 926 (947)
.... ..+++..+ ++. ......+.+||..|++.||++||++.+|++.+.++. +|+..
T Consensus 260 ~sg~-------------------laIlng~Y~~P~~-p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~~~~ 319 (738)
T KOG1989|consen 260 ESGK-------------------LAILNGNYSFPPF-PNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPCPIP 319 (738)
T ss_pred cCcc-------------------eeEEeccccCCCC-ccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCCCcc
Confidence 3211 23444443 222 467778999999999999999999999999998865 55555
Q ss_pred eee
Q 002250 927 NIV 929 (947)
Q Consensus 927 ~~~ 929 (947)
++.
T Consensus 320 ~~~ 322 (738)
T KOG1989|consen 320 DIY 322 (738)
T ss_pred ccc
Confidence 554
No 87
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.2e-37 Score=299.35 Aligned_cols=263 Identities=26% Similarity=0.388 Sum_probs=207.9
Q ss_pred HHHhhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-ccc
Q 002250 625 KEIIDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-RHV 702 (947)
Q Consensus 625 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~ 702 (947)
+..-..|...+.+|+|..++|-++..+ +|+++|+|++...+-...+.. ...-.++-.+|+.|++++ .||
T Consensus 13 ~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~---------~~~~~EaT~~Ev~ILRqv~GHP 83 (411)
T KOG0599|consen 13 KGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGET---------PYEMREATRQEISILRQVMGHP 83 (411)
T ss_pred hhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCcc---------HHHHHHHHHHHHHHHHHhcCCC
Confidence 445577888899999999999998855 789999999843222111110 001124456799999998 799
Q ss_pred ccceEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecC
Q 002250 703 NVVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDL 782 (947)
Q Consensus 703 niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~ 782 (947)
+|+++.++|+.+...++|+|.|+.|.|.|++.. ...+++....+|+.|+..|++||| ...||||||||+|||+++
T Consensus 84 ~II~l~D~yes~sF~FlVFdl~prGELFDyLts--~VtlSEK~tR~iMrqlfegVeylH---a~~IVHRDLKpENILldd 158 (411)
T KOG0599|consen 84 YIIDLQDVYESDAFVFLVFDLMPRGELFDYLTS--KVTLSEKETRRIMRQLFEGVEYLH---ARNIVHRDLKPENILLDD 158 (411)
T ss_pred cEEEeeeeccCcchhhhhhhhcccchHHHHhhh--heeecHHHHHHHHHHHHHHHHHHH---HhhhhhcccChhheeecc
Confidence 999999999999999999999999999999986 467888999999999999999999 899999999999999999
Q ss_pred CCCeEEeccccceecccCCCCcceecccccccccCccccc------cCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCc
Q 002250 783 EWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAY------TCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDS 856 (947)
Q Consensus 783 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~ 856 (947)
+.++||+|||+|....+++. ....+|||+|.|||.++ ...|+..+|+||.||++|.++.|++||+..
T Consensus 159 n~~i~isDFGFa~~l~~Gek---LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHR---- 231 (411)
T KOG0599|consen 159 NMNIKISDFGFACQLEPGEK---LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHR---- 231 (411)
T ss_pred ccceEEeccceeeccCCchh---HHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHH----
Confidence 99999999999998877654 33568999999999884 234788999999999999999999999421
Q ss_pred ccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 857 KDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 857 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
.-.-++...+++...+ -++...+......+++.+|++.||.+|.|++|++++
T Consensus 232 -kQmlMLR~ImeGkyqF-------~speWadis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 232 -KQMLMLRMIMEGKYQF-------RSPEWADISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred -HHHHHHHHHHhccccc-------CCcchhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 1111112222222221 133445566678889999999999999999999853
No 88
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1.8e-36 Score=335.29 Aligned_cols=249 Identities=22% Similarity=0.252 Sum_probs=199.1
Q ss_pred hhccCCcccccccCceeEEEEEeCC--CcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccc
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLNS--GKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVV 705 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 705 (947)
.++|++.+.||+|+||.||+|..+. +..||+|++.... .........+.+|+.+++.++||||+
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~--------------~~~~~~~~~~~~E~~~l~~l~hp~Iv 94 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSK--------------IIKQKQVDHVFSERKILNYINHPFCV 94 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHH--------------hhhhhhHHHHHHHHHHHHhCCCCCCc
Confidence 4678999999999999999998543 3689999883110 11123346788999999999999999
Q ss_pred eEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCC
Q 002250 706 KLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWK 785 (947)
Q Consensus 706 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~ 785 (947)
++++++.+++..++||||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++.
T Consensus 95 ~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~ 169 (340)
T PTZ00426 95 NLYGSFKDESYLYLVLEFVIGGEFFTFLRRN--KRFPNDVGCFYAAQIVLIFEYLQ---SLNIVYRDLKPENLLLDKDGF 169 (340)
T ss_pred ceEEEEEeCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCC
Confidence 9999999999999999999999999999864 35788899999999999999999 899999999999999999999
Q ss_pred eEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHh
Q 002250 786 PRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYS 865 (947)
Q Consensus 786 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~ 865 (947)
+||+|||++...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.... -......
T Consensus 170 ikL~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~-----~~~~~~~ 239 (340)
T PTZ00426 170 IKMTDFGFAKVVDTR-----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANE-----PLLIYQK 239 (340)
T ss_pred EEEecCCCCeecCCC-----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCC-----HHHHHHH
Confidence 999999999865432 123568999999999998889999999999999999999999995321 1111111
Q ss_pred hccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 002250 866 KMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRP-----SMRVVVQM 916 (947)
Q Consensus 866 ~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~ev~~~ 916 (947)
...... .++ ......+.+++.+|++.||++|+ +++++.++
T Consensus 240 i~~~~~--------~~p---~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 240 ILEGII--------YFP---KFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred HhcCCC--------CCC---CCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 111111 111 12234567889999999999995 78888765
No 89
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=4.3e-36 Score=328.51 Aligned_cols=265 Identities=20% Similarity=0.253 Sum_probs=196.2
Q ss_pred hhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccce
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVK 706 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 706 (947)
.++|++.+.||+|+||+||+|+.. +++.||||++... ........+.+|+.+++.++||||++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~----------------~~~~~~~~~~~E~~~l~~l~h~niv~ 67 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQ----------------EEEGTPFTAIREASLLKGLKHANIVL 67 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccc----------------cccccchhHHHHHHHHhhCCCCCcCe
Confidence 367899999999999999999966 7899999998321 11122345678999999999999999
Q ss_pred EEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCe
Q 002250 707 LYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKP 786 (947)
Q Consensus 707 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 786 (947)
+++++..+...++||||++ ++|.+++... ...++...+..++.|++.||+||| +.+|+||||||+||++++++.+
T Consensus 68 ~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~ 142 (303)
T cd07869 68 LHDIIHTKETLTLVFEYVH-TDLCQYMDKH-PGGLHPENVKLFLFQLLRGLSYIH---QRYILHRDLKPQNLLISDTGEL 142 (303)
T ss_pred EEEEEecCCeEEEEEECCC-cCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCE
Confidence 9999999999999999995 6888888753 345788888999999999999999 8999999999999999999999
Q ss_pred EEeccccceecccCCCCcceecccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHh
Q 002250 787 RIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYT-CKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYS 865 (947)
Q Consensus 787 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~ 865 (947)
||+|||+++....... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.........+......
T Consensus 143 kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~ 220 (303)
T cd07869 143 KLADFGLARAKSVPSH--TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLV 220 (303)
T ss_pred EECCCCcceeccCCCc--cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHH
Confidence 9999999975432211 1223467899999998865 457889999999999999999999996432111111111110
Q ss_pred hccccc-cccc-----cccCC-C----CccCH------HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 866 KMDSRD-SMLT-----VVDPN-I----SEILK------EDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 866 ~~~~~~-~~~~-----~~d~~-~----~~~~~------~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
...... .+.. ..++. . +.... .....+.+++.+|++.||++|||+.|+++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 221 LGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred hCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 000000 0000 00000 0 00000 01245778999999999999999999986
No 90
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=2e-36 Score=328.68 Aligned_cols=260 Identities=23% Similarity=0.369 Sum_probs=204.5
Q ss_pred hccCCcccccccCceeEEEEEeC------CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcccc
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN------SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHV 702 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 702 (947)
.+|.+.+.||+|+||.||++... ++..+|+|.+... .......+.+|++++++++||
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~-----------------~~~~~~~~~~e~~~l~~l~h~ 67 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA-----------------SDNARKDFHREAELLTNLQHE 67 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc-----------------CHHHHHHHHHHHHHHHhCCCC
Confidence 56888999999999999999842 3456899987311 112345688999999999999
Q ss_pred ccceEEEEEecCCccEEEEeccCCCChHHHhhhcC-----------CccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEec
Q 002250 703 NVVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCH-----------KIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHR 771 (947)
Q Consensus 703 niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-----------~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~ 771 (947)
||+++++++...+..++||||+++++|.+++...+ ...+++..+..++.|++.||+||| +.+++||
T Consensus 68 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH---~~~i~H~ 144 (288)
T cd05093 68 HIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLA---SQHFVHR 144 (288)
T ss_pred CcceEEEEEecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeec
Confidence 99999999999999999999999999999997532 234899999999999999999999 8999999
Q ss_pred cCCCCCeEecCCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCC
Q 002250 772 DVKSSNILLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIV 850 (947)
Q Consensus 772 Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~ 850 (947)
||||+||++++++.++|+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||.
T Consensus 145 dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~ 224 (288)
T cd05093 145 DLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWY 224 (288)
T ss_pred ccCcceEEEccCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999975543322212223345778999999998889999999999999999999 888884
Q ss_pred CCCCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCCC
Q 002250 851 PEFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAEPC 923 (947)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 923 (947)
... ...... ...... ........+..+.+++.+||+.+|.+|||+.++.+.|+++...
T Consensus 225 ~~~--~~~~~~---~i~~~~----------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 225 QLS--NNEVIE---CITQGR----------VLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred CCC--HHHHHH---HHHcCC----------cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 321 111111 111111 0111112345689999999999999999999999999987643
No 91
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.2e-36 Score=329.60 Aligned_cols=258 Identities=23% Similarity=0.329 Sum_probs=202.6
Q ss_pred hccCCcccccccCceeEEEEEeC------CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcccc
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN------SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHV 702 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 702 (947)
..|++.+.||+|+||.||+|... +++.||||++.... .......+.+|+.++++++||
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~----------------~~~~~~~~~~e~~~~~~l~h~ 68 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA----------------EGPLREEFKHEAMMRSRLQHP 68 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC----------------CHHHHHHHHHHHHHHhcCCCC
Confidence 45777889999999999999854 25789999983110 011235688999999999999
Q ss_pred ccceEEEEEecCCccEEEEeccCCCChHHHhhhc--------------CCccCCHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 002250 703 NVVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTC--------------HKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPV 768 (947)
Q Consensus 703 niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~--------------~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~i 768 (947)
||+++++++...+..++++||+++++|.+++... ....+++..+..++.|++.||+|+| +.+|
T Consensus 69 ~iv~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH---~~gi 145 (283)
T cd05091 69 NIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLS---SHHV 145 (283)
T ss_pred CcCeEEEEEcCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HcCc
Confidence 9999999999999999999999999999998532 1234788889999999999999999 8999
Q ss_pred EeccCCCCCeEecCCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCC
Q 002250 769 IHRDVKSSNILLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKR 847 (947)
Q Consensus 769 vH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~ 847 (947)
+||||||+||++++++.+||+|||+++...............+++.|+|||++..+.++.++||||||+++|||++ |..
T Consensus 146 ~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~ 225 (283)
T cd05091 146 VHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQ 225 (283)
T ss_pred cccccchhheEecCCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCC
Confidence 9999999999999999999999999876543332222223345789999999988889999999999999999998 777
Q ss_pred CCCCCCCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 002250 848 PIVPEFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEA 920 (947)
Q Consensus 848 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 920 (947)
||.... ..++.+ .... ......+...+..+.+++.+|++.+|++||++.+|++.|+.+
T Consensus 226 p~~~~~--~~~~~~---~i~~----------~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~ 283 (283)
T cd05091 226 PYCGYS--NQDVIE---MIRN----------RQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRTW 283 (283)
T ss_pred CCCCCC--HHHHHH---HHHc----------CCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhCC
Confidence 874321 111211 1111 111222334556788999999999999999999999999753
No 92
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=5.2e-36 Score=320.55 Aligned_cols=254 Identities=26% Similarity=0.412 Sum_probs=203.2
Q ss_pred hccCCcccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
++|++.+.||+|+||.||+|...+...||+|++... ....+.+.+|++++++++||||++++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~------------------~~~~~~~~~E~~~l~~l~~~~i~~~~ 67 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG------------------TMSPEAFLQEAQVMKKLRHEKLVQLY 67 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccC------------------ccCHHHHHHHHHHHHhCCCCCcceEE
Confidence 568999999999999999999877778999988311 12235788999999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRI 788 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 788 (947)
+++.+ ...++||||+++|+|.+++.......+++..+..++.|++.||+|+| +.+++||||||+||++++++.++|
T Consensus 68 ~~~~~-~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~Nill~~~~~~~L 143 (262)
T cd05071 68 AVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKV 143 (262)
T ss_pred EEECC-CCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcccEEEcCCCcEEe
Confidence 98754 56799999999999999998754556799999999999999999999 899999999999999999999999
Q ss_pred eccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhc
Q 002250 789 ADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNWVYSKM 867 (947)
Q Consensus 789 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 867 (947)
+|||.++........ ......++..|+|||+..+..++.++||||||+++|||++ |..||.... ..... ...
T Consensus 144 ~dfg~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~--~~~~~----~~~ 216 (262)
T cd05071 144 ADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV--NREVL----DQV 216 (262)
T ss_pred ccCCceeeccccccc-cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC--hHHHH----HHH
Confidence 999999765433221 1112346678999999988889999999999999999999 777874321 11111 111
Q ss_pred cccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 002250 868 DSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEA 920 (947)
Q Consensus 868 ~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 920 (947)
.... ......+.+..+.+++.+|++.+|++||++.++.+.|++.
T Consensus 217 ~~~~---------~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 217 ERGY---------RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred hcCC---------CCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 1110 0112234556788999999999999999999999999864
No 93
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=4.8e-36 Score=320.58 Aligned_cols=254 Identities=28% Similarity=0.435 Sum_probs=203.9
Q ss_pred hhccCCcccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
.++|++.+.||+|+||.||+|..+++..||+|.+.+.. ...+.+.+|+.++++++|+|++++
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~------------------~~~~~~~~E~~~l~~l~~~~i~~~ 66 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGT------------------MSPESFLEEAQIMKKLRHDKLVQL 66 (260)
T ss_pred hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCC------------------CCHHHHHHHHHHHHhcCCCceEEE
Confidence 36788999999999999999998888899999884221 223568899999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
++++. ....++||||+++++|.++++......+++..+..++.|++.|++||| +.+++||||||+||++++++.++
T Consensus 67 ~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~Nili~~~~~~~ 142 (260)
T cd05070 67 YAVVS-EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDLRSANILVGDGLVCK 142 (260)
T ss_pred EeEEC-CCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEEeCCceEE
Confidence 99885 456899999999999999998755556899999999999999999999 88999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHhh
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNWVYSK 866 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~ 866 (947)
|+|||.+.......... .....++..|+|||+..+..++.++||||||+++|||++ |..||... ...+..+..
T Consensus 143 l~dfg~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~--~~~~~~~~~--- 216 (260)
T cd05070 143 IADFGLARLIEDNEYTA-RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGM--NNREVLEQV--- 216 (260)
T ss_pred eCCceeeeeccCccccc-ccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCC--CHHHHHHHH---
Confidence 99999998654432211 112235678999999988889999999999999999999 88888432 111122211
Q ss_pred ccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhc
Q 002250 867 MDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEE 919 (947)
Q Consensus 867 ~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~ 919 (947)
.. .. ..+.+...+..+.+++.+|++.+|++|||+.++.+.|++
T Consensus 217 ~~-~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 217 ER-GY---------RMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred Hc-CC---------CCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 11 10 011223345678899999999999999999999999876
No 94
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=3.1e-36 Score=332.07 Aligned_cols=245 Identities=24% Similarity=0.283 Sum_probs=194.4
Q ss_pred ccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEEEEec
Q 002250 635 NLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYCSITS 713 (947)
Q Consensus 635 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 713 (947)
+.||+|+||.||+|+.. +|+.||+|++.... .........+.+|++++++++||||+++++++..
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--------------~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~ 66 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEV--------------IIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT 66 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHH--------------hhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEec
Confidence 46899999999999965 78999999984211 1112234567789999999999999999999999
Q ss_pred CCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEecccc
Q 002250 714 EDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFGL 793 (947)
Q Consensus 714 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 793 (947)
++..|+||||+++|+|.+++... ..+++.....++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+
T Consensus 67 ~~~~~lv~E~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 141 (323)
T cd05595 67 HDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGL 141 (323)
T ss_pred CCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEEcCCCCEEecccHH
Confidence 99999999999999999988763 35889999999999999999999 89999999999999999999999999999
Q ss_pred ceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhccccccc
Q 002250 794 AKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDSRDSM 873 (947)
Q Consensus 794 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 873 (947)
++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.... .............
T Consensus 142 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~-----~~~~~~~~~~~~~-- 212 (323)
T cd05595 142 CKEGISDGA--TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-----HERLFELILMEEI-- 212 (323)
T ss_pred hccccCCCC--ccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCC-----HHHHHHHHhcCCC--
Confidence 875322211 1223568999999999998899999999999999999999999985321 1111111111111
Q ss_pred cccccCCCCccCHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 002250 874 LTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRP-----SMRVVVQM 916 (947)
Q Consensus 874 ~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~ev~~~ 916 (947)
..+......+.+++.+|++.||++|| ++.+++++
T Consensus 213 ---------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 213 ---------RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred ---------CCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence 11223345678899999999999998 78888753
No 95
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=2.7e-36 Score=327.63 Aligned_cols=265 Identities=18% Similarity=0.207 Sum_probs=199.0
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
++|++.+.||+|+||+||+|+.+ +++.||||++.... ........+.+|+++++.++||||+++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~---------------~~~~~~~~~~~E~~~l~~l~h~~iv~~ 65 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSE---------------ENEEVKETTLRELKMLRTLKQENIVEL 65 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEeccc---------------ccccchhhHHHHHHHHHhCCCccccch
Confidence 36888999999999999999976 68899999984221 111234567889999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
++++..++..++||||++++.+..+... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+|
T Consensus 66 ~~~~~~~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nill~~~~~~k 140 (287)
T cd07848 66 KEAFRRRGKLYLVFEYVEKNMLELLEEM--PNGVPPEKVRSYIYQLIKAIHWCH---KNDIVHRDIKPENLLISHNDVLK 140 (287)
T ss_pred hhhEecCCEEEEEEecCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEE
Confidence 9999999999999999998776655433 345888899999999999999999 89999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhh-
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSK- 866 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~- 866 (947)
|+|||++......... ......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ...........
T Consensus 141 l~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~-~~~~~~~~~~~~ 218 (287)
T cd07848 141 LCDFGFARNLSEGSNA-NYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESE-IDQLFTIQKVLG 218 (287)
T ss_pred EeeccCcccccccccc-cccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHhhC
Confidence 9999999865433221 12234689999999999988899999999999999999999999854321 11111100000
Q ss_pred ---------ccccccccccccCCC-------CccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 867 ---------MDSRDSMLTVVDPNI-------SEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 867 ---------~~~~~~~~~~~d~~~-------~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
............+.. ..........+.+++.+|++.||++|||+.|+++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 219 PLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred CCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000000000000000 0011123456899999999999999999999886
No 96
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=3.4e-36 Score=320.21 Aligned_cols=250 Identities=24% Similarity=0.316 Sum_probs=195.6
Q ss_pred ccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEEEEec
Q 002250 635 NLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYCSITS 713 (947)
Q Consensus 635 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 713 (947)
+.||+|+||.||+|... +++.||+|.+... ........+.+|++++++++||||+++++++..
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~----------------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 64 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRET----------------LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ 64 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCcc----------------CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC
Confidence 46899999999999965 7899999987311 011233568899999999999999999999999
Q ss_pred CCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEecccc
Q 002250 714 EDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFGL 793 (947)
Q Consensus 714 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 793 (947)
+...++||||+++++|.+++... ...+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||+
T Consensus 65 ~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~ 140 (252)
T cd05084 65 KQPIYIVMELVQGGDFLTFLRTE-GPRLKVKELIQMVENAAAGMEYLE---SKHCIHRDLAARNCLVTEKNVLKISDFGM 140 (252)
T ss_pred CCCeEEEEeeccCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEEcCCCcEEECcccc
Confidence 99999999999999999999753 345789999999999999999999 89999999999999999999999999999
Q ss_pred ceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhcccccc
Q 002250 794 AKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNWVYSKMDSRDS 872 (947)
Q Consensus 794 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 872 (947)
+.................+..|+|||.+.++.++.++||||||+++|||++ |..||.... ...... ......
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~--~~~~~~----~~~~~~- 213 (252)
T cd05084 141 SREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLS--NQQTRE----AIEQGV- 213 (252)
T ss_pred CcccccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccC--HHHHHH----HHHcCC-
Confidence 875433211111111123457999999998889999999999999999998 888874321 111111 111100
Q ss_pred ccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhc
Q 002250 873 MLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEE 919 (947)
Q Consensus 873 ~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~ 919 (947)
....+...+..+.+++.+|++.+|++|||+.++.++|++
T Consensus 214 --------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 252 (252)
T cd05084 214 --------RLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQS 252 (252)
T ss_pred --------CCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence 011222345678899999999999999999999999874
No 97
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=5.2e-36 Score=320.34 Aligned_cols=255 Identities=26% Similarity=0.396 Sum_probs=205.3
Q ss_pred hhccCCcccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
.+.|++.++||+|+||.||+|..++++.||+|.+... ......+.+|+.++++++|+||+++
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~------------------~~~~~~~~~E~~~l~~l~h~~i~~~ 66 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQG------------------SMSPEAFLAEANLMKQLQHPRLVRL 66 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCC------------------CCcHHHHHHHHHHHHhcCCcCeeeE
Confidence 3678899999999999999999888999999988321 1234578899999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
++++. .+..++||||+++++|.+++.......+++..+..++.|++.|++||| +.+++||||||+||++++++.++
T Consensus 67 ~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~ 142 (260)
T cd05067 67 YAVVT-QEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIE---RKNYIHRDLRAANILVSETLCCK 142 (260)
T ss_pred EEEEc-cCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHHhEEEcCCCCEE
Confidence 99874 457899999999999999998766667899999999999999999999 89999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHhh
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNWVYSK 866 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~ 866 (947)
++|||++......... ......++..|+|||++....++.++||||||+++|||++ |+.||.... ..+.....
T Consensus 143 l~dfg~~~~~~~~~~~-~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--~~~~~~~~--- 216 (260)
T cd05067 143 IADFGLARLIEDNEYT-AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMT--NPEVIQNL--- 216 (260)
T ss_pred EccCcceeecCCCCcc-cccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCC--hHHHHHHH---
Confidence 9999999765532221 1112345678999999988889999999999999999999 999985321 11121111
Q ss_pred ccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 002250 867 MDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEA 920 (947)
Q Consensus 867 ~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 920 (947)
..... .+.....+..+.+++.+|++.+|++||+++++.+.|+.+
T Consensus 217 -~~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 260 (260)
T cd05067 217 -ERGYR---------MPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLEDF 260 (260)
T ss_pred -HcCCC---------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhcC
Confidence 11100 111122345689999999999999999999999999863
No 98
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=2.1e-36 Score=349.83 Aligned_cols=256 Identities=24% Similarity=0.317 Sum_probs=204.0
Q ss_pred hhccCCcccccccCceeEEEEEe-CCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccce
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVL-NSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVK 706 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 706 (947)
.++|.+.+.||+|+||+||+|+. .+|+.||||++..... .......+.+|+.++..++|+||++
T Consensus 31 ~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~---------------~~~~~~~~~~Ei~~l~~~~h~~iv~ 95 (496)
T PTZ00283 31 AKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGM---------------SEADKNRAQAEVCCLLNCDFFSIVK 95 (496)
T ss_pred CCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccC---------------CHHHHHHHHHHHHHHhcCCCCcEEE
Confidence 46899999999999999999985 4799999999842211 1123456788999999999999999
Q ss_pred EEEEEecCC--------ccEEEEeccCCCChHHHhhhc--CCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCC
Q 002250 707 LYCSITSED--------SNLLVYEYLPNGSLWDRLHTC--HKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSS 776 (947)
Q Consensus 707 l~~~~~~~~--------~~~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~ 776 (947)
+++.+...+ ..++||||+++|+|.++++.. ....+++.....++.|++.||+||| +.+|+||||||+
T Consensus 96 ~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH---~~~IiHrDLKP~ 172 (496)
T PTZ00283 96 CHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVH---SKHMIHRDIKSA 172 (496)
T ss_pred eecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHH
Confidence 988775433 257999999999999999753 2346889999999999999999999 899999999999
Q ss_pred CeEecCCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCc
Q 002250 777 NILLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDS 856 (947)
Q Consensus 777 NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~ 856 (947)
||+++.++.+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 173 NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~---- 248 (496)
T PTZ00283 173 NILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGE---- 248 (496)
T ss_pred HEEEeCCCCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC----
Confidence 9999999999999999998765433333333457999999999999989999999999999999999999998432
Q ss_pred ccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 857 KDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 857 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
+..+.+...... .....+...+..+.+++.+||+.||++||++.+++++
T Consensus 249 -~~~~~~~~~~~~----------~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 249 -NMEEVMHKTLAG----------RYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred -CHHHHHHHHhcC----------CCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 222222222211 1112223345678899999999999999999999864
No 99
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=2.6e-36 Score=328.28 Aligned_cols=259 Identities=24% Similarity=0.363 Sum_probs=205.0
Q ss_pred hccCCcccccccCceeEEEEEeC------CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcccc
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN------SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHV 702 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 702 (947)
++|.+.+.||+|+||.||+|+.. ++..+|+|.+... .......+.+|++++++++||
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~-----------------~~~~~~~~~~e~~~l~~l~h~ 67 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP-----------------TLAARKDFQREAELLTNLQHE 67 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCc-----------------cHHHHHHHHHHHHHHhcCCCC
Confidence 45778899999999999999843 3556899987311 112235688999999999999
Q ss_pred ccceEEEEEecCCccEEEEeccCCCChHHHhhhcC--------------CccCCHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 002250 703 NVVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCH--------------KIEMDWVVRYAIAVGAAKGLEYLHHGFDRPV 768 (947)
Q Consensus 703 niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~--------------~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~i 768 (947)
||+++++++...+..++||||+++++|.+++.... ...+++..++.++.|++.|++||| +.+|
T Consensus 68 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i 144 (291)
T cd05094 68 HIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLA---SQHF 144 (291)
T ss_pred CcceEEEEEccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHH---hCCe
Confidence 99999999999999999999999999999997532 234789999999999999999999 8999
Q ss_pred EeccCCCCCeEecCCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCC
Q 002250 769 IHRDVKSSNILLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKR 847 (947)
Q Consensus 769 vH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~ 847 (947)
+||||||+||+++.++.++|+|||++................++..|+|||++....++.++||||||+++|||+| |+.
T Consensus 145 ~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~ 224 (291)
T cd05094 145 VHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQ 224 (291)
T ss_pred eecccCcceEEEccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999976544322222223456788999999998889999999999999999999 999
Q ss_pred CCCCCCCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCC
Q 002250 848 PIVPEFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAEP 922 (947)
Q Consensus 848 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 922 (947)
||.... .....+. .. . ....+.....+..+.+++.+||+.+|++|||+.+|+++|+++..
T Consensus 225 p~~~~~--~~~~~~~---~~-~---------~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~ 284 (291)
T cd05094 225 PWFQLS--NTEVIEC---IT-Q---------GRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK 284 (291)
T ss_pred CCCCCC--HHHHHHH---Hh-C---------CCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence 985321 1111111 11 1 11111122335678899999999999999999999999998744
No 100
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.1e-36 Score=310.48 Aligned_cols=272 Identities=22% Similarity=0.261 Sum_probs=204.9
Q ss_pred hhccCCcccccccCceeEEEEEe-CCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccc-cc
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVL-NSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVN-VV 705 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv 705 (947)
...|...++||+|+||+||+|+. .+|+.||+|++.-.. ..+.......+|+.+++.++|+| ||
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~---------------~~EG~P~taiREisllk~L~~~~~iv 74 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEF---------------EEEGVPSTAIREISLLKRLSHANHIV 74 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccc---------------cccCCCchhhHHHHHHHHhCCCcceE
Confidence 45677778899999999999995 479999999994221 11223455678999999999999 99
Q ss_pred eEEEEEecCC------ccEEEEeccCCCChHHHhhhcCC--ccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCC
Q 002250 706 KLYCSITSED------SNLLVYEYLPNGSLWDRLHTCHK--IEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSN 777 (947)
Q Consensus 706 ~l~~~~~~~~------~~~lv~e~~~~gsL~~~l~~~~~--~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~N 777 (947)
++++++.... ..++|+||+ .-+|.+++..... ...+...+..++.|++.||+||| +++|+||||||+|
T Consensus 75 ~L~dv~~~~~~~~~~~~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H---~~~IlHRDLKPQN 150 (323)
T KOG0594|consen 75 RLHDVIHTSNNHRGIGKLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLH---SHGILHRDLKPQN 150 (323)
T ss_pred EEEeeeeecccccccceEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCcce
Confidence 9999998877 788999999 5599999987653 35677889999999999999999 9999999999999
Q ss_pred eEecCCCCeEEeccccceecccCCCCcceecccccccccCccccccC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCCc
Q 002250 778 ILLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTC-KINEKSDVYSFGVVLMELVTGKRPIVPEFGDS 856 (947)
Q Consensus 778 Ill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~ 856 (947)
|+++++|.+||+|||+|+...-.. ...+..++|..|.|||++.+. .|+..+||||+||+++||++++.-|.+..+ .
T Consensus 151 lLi~~~G~lKlaDFGlAra~~ip~--~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se-~ 227 (323)
T KOG0594|consen 151 LLISSSGVLKLADFGLARAFSIPM--RTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE-I 227 (323)
T ss_pred EEECCCCcEeeeccchHHHhcCCc--ccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH-H
Confidence 999999999999999998654222 123455789999999999887 589999999999999999998877754322 2
Q ss_pred ccHHHHHHhhcc-ccccccccc---cCC--C---------CccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH--hhc
Q 002250 857 KDIVNWVYSKMD-SRDSMLTVV---DPN--I---------SEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM--LEE 919 (947)
Q Consensus 857 ~~~~~~~~~~~~-~~~~~~~~~---d~~--~---------~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~--L~~ 919 (947)
+.+......... ....+..+. +.. . ............+++.+|++++|.+|.|++.++++ +..
T Consensus 228 ~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~ 307 (323)
T KOG0594|consen 228 DQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSE 307 (323)
T ss_pred HHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhcc
Confidence 222222111111 111111111 100 1 11111222468899999999999999999999987 665
Q ss_pred cC
Q 002250 920 AE 921 (947)
Q Consensus 920 ~~ 921 (947)
..
T Consensus 308 ~~ 309 (323)
T KOG0594|consen 308 LP 309 (323)
T ss_pred cc
Confidence 54
No 101
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-36 Score=333.68 Aligned_cols=262 Identities=24% Similarity=0.328 Sum_probs=214.2
Q ss_pred CCcccccccCceeEEEEEe-CCC----cEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccce
Q 002250 632 KPENLIGKGGSGNVYKVVL-NSG----KELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVK 706 (947)
Q Consensus 632 ~~~~~iG~G~~g~Vy~~~~-~~~----~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 706 (947)
+..++||.|+||+||||.+ +.| -+||||++. .....+...++.+|+.+|.+++|||+++
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~----------------~~t~~~~s~e~LdeAl~masldHpnl~R 762 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLI----------------EFTSPKASIELLDEALRMASLDHPNLLR 762 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEee----------------ccCCchhhHHHHHHHHHHhcCCCchHHH
Confidence 3467899999999999984 444 368999872 2333456788999999999999999999
Q ss_pred EEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCe
Q 002250 707 LYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKP 786 (947)
Q Consensus 707 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 786 (947)
++|+|.... ..||++|+|.|+|.|+++. .+..+.....+.+..|||+||.||| .+++|||||.++|||+..-..+
T Consensus 763 LLgvc~~s~-~qlvtq~mP~G~LlDyvr~-hr~~igsq~lLnw~~QIAkgM~YLe---~qrlVHrdLaaRNVLVksP~hv 837 (1177)
T KOG1025|consen 763 LLGVCMLST-LQLVTQLMPLGCLLDYVRE-HRDNIGSQDLLNWCYQIAKGMKYLE---EQRLVHRDLAARNVLVKSPNHV 837 (1177)
T ss_pred Hhhhcccch-HHHHHHhcccchHHHHHHH-hhccccHHHHHHHHHHHHHHHHHHH---hcchhhhhhhhhheeecCCCeE
Confidence 999999876 8899999999999999997 4556888889999999999999999 8999999999999999999999
Q ss_pred EEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHh
Q 002250 787 RIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNWVYS 865 (947)
Q Consensus 787 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~ 865 (947)
||.|||+|+....++.........-.+.|||-|.+....|+.++|||||||++||++| |..|++... .+++.+.+
T Consensus 838 kitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~--~~eI~dll-- 913 (1177)
T KOG1025|consen 838 KITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIP--AEEIPDLL-- 913 (1177)
T ss_pred EEEecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCC--HHHhhHHH--
Confidence 9999999998877655443333334678999999999999999999999999999999 999985431 12222211
Q ss_pred hccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCCCCcceee
Q 002250 866 KMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAEPCSVTNIV 929 (947)
Q Consensus 866 ~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~~~~ 929 (947)
+ ++..-..++.+..+++.++.+||..|++.||+++++...+.+...-|-.+.+
T Consensus 914 --e---------~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardpqryl~ 966 (1177)
T KOG1025|consen 914 --E---------KGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDPQRYLV 966 (1177)
T ss_pred --h---------ccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCcceEee
Confidence 1 1222345667778899999999999999999999999999987665544443
No 102
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=3.5e-36 Score=326.00 Aligned_cols=270 Identities=26% Similarity=0.360 Sum_probs=201.2
Q ss_pred hcc-CCcccccccCceeEEEEEe-----CCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcccc
Q 002250 629 DAV-KPENLIGKGGSGNVYKVVL-----NSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHV 702 (947)
Q Consensus 629 ~~~-~~~~~iG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 702 (947)
++| +..+.||+|+||+||++.. .+++.||+|++.... .......+.+|++++++++||
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~----------------~~~~~~~~~~E~~~l~~l~h~ 66 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC----------------GQQNTSGWKKEINILKTLYHE 66 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc----------------ChHHHHHHHHHHHHHHhCCCC
Confidence 345 7889999999999988652 357899999884211 012345678899999999999
Q ss_pred ccceEEEEEecC--CccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEe
Q 002250 703 NVVKLYCSITSE--DSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILL 780 (947)
Q Consensus 703 niv~l~~~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll 780 (947)
||+++++++... ...++||||+++++|.+++.. ..+++..+..++.|++.|++||| +.+|+||||||+||++
T Consensus 67 ~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~l~~~~~~~i~~~l~~~l~~lH---~~~i~H~dlkp~Nili 140 (283)
T cd05080 67 NIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPK---HKLNLAQLLLFAQQICEGMAYLH---SQHYIHRDLAARNVLL 140 (283)
T ss_pred CEeeEEEEEecCCCceEEEEecCCCCCCHHHHHHH---cCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccChheEEE
Confidence 999999988664 357899999999999999976 34899999999999999999999 8999999999999999
Q ss_pred cCCCCeEEeccccceecccCCCCc-ceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccH
Q 002250 781 DLEWKPRIADFGLAKIVQTGEAGD-LTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDI 859 (947)
Q Consensus 781 ~~~~~~kl~DfG~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~ 859 (947)
++++.++|+|||+++......... ......++..|+|||++....++.++||||||+++|||++|+.||........+.
T Consensus 141 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~ 220 (283)
T cd05080 141 DNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEM 220 (283)
T ss_pred cCCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhh
Confidence 999999999999998654332211 1112235667999999988889999999999999999999999975332111111
Q ss_pred HHHHHhhccccccccccccCC-CCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccC
Q 002250 860 VNWVYSKMDSRDSMLTVVDPN-ISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAE 921 (947)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~ 921 (947)
........... ......+.. ..+.+...+..+.+++.+||+.+|++|||+++++++|+++.
T Consensus 221 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 221 IGPKQGQMTVV-RLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hcccccccchh-hhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 11000000000 000111111 11223344567899999999999999999999999998764
No 103
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=4.9e-36 Score=319.69 Aligned_cols=252 Identities=24% Similarity=0.337 Sum_probs=201.0
Q ss_pred hccCCcccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
.+|++.+.||+|+||.||+|..+++..+|+|.+... ......+.+|++++++++||||++++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~------------------~~~~~~~~~e~~~l~~l~~~~i~~~~ 65 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREG------------------AMSEDDFIEEAKVMMKLSHPNLVQLY 65 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccC------------------CCCHHHHHHHHHHHHhCCCCCEEEEE
Confidence 457888999999999999999887788999987311 12335688899999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRI 788 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 788 (947)
+++...+..++||||+++++|.+++.... ..+++..+..++.|++.|++||| +.+++||||||+||++++++.+||
T Consensus 66 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl 141 (256)
T cd05059 66 GVCTKQRPIFIVTEYMANGCLLNYLRERK-GKLGTEWLLDMCSDVCEAMEYLE---SNGFIHRDLAARNCLVGEDNVVKV 141 (256)
T ss_pred EEEcCCCceEEEEecCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHhhEEECCCCcEEE
Confidence 99999999999999999999999997643 36899999999999999999999 899999999999999999999999
Q ss_pred eccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhc
Q 002250 789 ADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNWVYSKM 867 (947)
Q Consensus 789 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 867 (947)
+|||.++......... .....++..|+|||.+....++.++||||||+++|||++ |+.||... .........
T Consensus 142 ~dfg~~~~~~~~~~~~-~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~--~~~~~~~~~---- 214 (256)
T cd05059 142 SDFGLARYVLDDQYTS-SQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERF--SNSEVVESV---- 214 (256)
T ss_pred CCcccceecccccccc-cCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCC--CHHHHHHHH----
Confidence 9999998654322111 111223457999999998889999999999999999999 78888432 111111111
Q ss_pred cccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 002250 868 DSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLE 918 (947)
Q Consensus 868 ~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~ 918 (947)
.... .. ..+...+..+.+++.+||+.+|++|||+.|+++.|.
T Consensus 215 ~~~~------~~---~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l~ 256 (256)
T cd05059 215 SAGY------RL---YRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQLT 256 (256)
T ss_pred HcCC------cC---CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHhC
Confidence 1110 00 111224557889999999999999999999999873
No 104
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=4.7e-36 Score=331.23 Aligned_cols=245 Identities=24% Similarity=0.283 Sum_probs=195.5
Q ss_pred ccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEEEEec
Q 002250 635 NLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYCSITS 713 (947)
Q Consensus 635 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 713 (947)
+.||+|+||.||+|+.. +++.||||++.... .........+.+|+.+++.++||||+++++++..
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~--------------~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 66 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEV--------------IIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQT 66 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHH--------------hhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEc
Confidence 36899999999999965 68999999984211 1112334677889999999999999999999999
Q ss_pred CCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEecccc
Q 002250 714 EDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFGL 793 (947)
Q Consensus 714 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 793 (947)
++..++||||+++|+|.+++... ..+++.....++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+
T Consensus 67 ~~~~~lv~Ey~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~NIll~~~~~~kL~DfG~ 141 (328)
T cd05593 67 KDRLCFVMEYVNGGELFFHLSRE--RVFSEDRTRFYGAEIVSALDYLH---SGKIVYRDLKLENLMLDKDGHIKITDFGL 141 (328)
T ss_pred CCEEEEEEeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeEECCCCcEEEecCcC
Confidence 99999999999999999998763 35889999999999999999999 89999999999999999999999999999
Q ss_pred ceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhccccccc
Q 002250 794 AKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDSRDSM 873 (947)
Q Consensus 794 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 873 (947)
++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||... +............
T Consensus 142 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~-----~~~~~~~~~~~~~--- 211 (328)
T cd05593 142 CKEGITDA--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ-----DHEKLFELILMED--- 211 (328)
T ss_pred CccCCCcc--cccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCC-----CHHHHHHHhccCC---
Confidence 87532221 1122456999999999999888999999999999999999999998532 1111111111111
Q ss_pred cccccCCCCccCHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 002250 874 LTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRP-----SMRVVVQM 916 (947)
Q Consensus 874 ~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~ev~~~ 916 (947)
. .++......+.+++.+|++.||++|| ++.|++++
T Consensus 212 -----~---~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 212 -----I---KFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred -----c---cCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 1 11222345678899999999999997 89998865
No 105
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=5.5e-39 Score=342.77 Aligned_cols=372 Identities=27% Similarity=0.404 Sum_probs=287.7
Q ss_pred cCCCceeeCCCCCCCCCCCChhhcccccCcEEEccCccccccCCccCCCCCCCCEEECcCcccccccCccccCCCCCcEE
Q 002250 132 LTNLEFLSLGDNPFDPSPFPMEVLKLEKLYWLYLTNCSVTGQIPEGIGNLTQLQNLELSDNELFGEIPAGIVKLNKLWQL 211 (947)
Q Consensus 132 l~~L~~L~Ls~n~i~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L 211 (947)
|+-.+-.|+++|.++...+|.....+++++||.|...++. .+|+.++.|.+|++|.+++|++. .+-..+..++.|+.+
T Consensus 6 LpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv 83 (1255)
T KOG0444|consen 6 LPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSV 83 (1255)
T ss_pred cceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHH
Confidence 4556778999999998889999999999999999999999 79999999999999999999997 667789999999999
Q ss_pred Eeecccccc-cCCccCCCCCCccEEeccCCCCCCCCccccccCCCCEEEccCccCcccCCCCccCCCcCcEEEccCcccc
Q 002250 212 ELYNNSLSG-RLPVGFSNLTNLMNFDVSQNRLEGDLSELRFLNQLSSLHLFENQFSGEIPEEFGEFKHLTELSLYTNRLT 290 (947)
Q Consensus 212 ~L~~n~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 290 (947)
.+.+|+++. -+|..+..+..|..||||+|+++..|..+...+++-.|+|++|+|..+.-..|.+++.|-.|||++|++.
T Consensus 84 ~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe 163 (1255)
T KOG0444|consen 84 IVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLREVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLE 163 (1255)
T ss_pred hhhccccccCCCCchhcccccceeeecchhhhhhcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhh
Confidence 999999964 4677788999999999999999999999999999999999999999554455778999999999999998
Q ss_pred ccCCcCccCcccccccccccccccCCCCCCcccCCccceeeecccccCCcCCccccCCCCccEEEccccccc-ccCCCCC
Q 002250 291 GTLPQKLGSWADFNYVDVSENLLTGPIPPDMCKTGAMTDLLVLQNNFNGTVPETYANCKSLIRFRVNNNSLS-GTIPPGI 369 (947)
Q Consensus 291 ~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~-~~~p~~~ 369 (947)
.+|..+..+..|++|+|++|++...--.. +-.+++|+.|.+++.+-+ .-+|.++
T Consensus 164 -~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQ------------------------LPsmtsL~vLhms~TqRTl~N~Ptsl 218 (1255)
T KOG0444|consen 164 -MLPPQIRRLSMLQTLKLSNNPLNHFQLRQ------------------------LPSMTSLSVLHMSNTQRTLDNIPTSL 218 (1255)
T ss_pred -hcCHHHHHHhhhhhhhcCCChhhHHHHhc------------------------CccchhhhhhhcccccchhhcCCCch
Confidence 88988999999999999999986211111 123445555566554432 2456666
Q ss_pred CCCCCcceeccccCCcCCCCCCcccccccccEEEccCccccccCCCCCCCCCcceEEEcccCcccCCCCcccccccccch
Q 002250 370 WSLPNLSIIDLSTNQFEGPVTDDIGNAKSLALLLLANNRFSGELPSKISEASSLVSIQLSLNQFSGQIPLDIGKLKKLSS 449 (947)
Q Consensus 370 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 449 (947)
-.+.+|..+|||.|.+. .+|+++-++.+|+.|+||+|+|+ .+....+...+|++|+||.|+++ .+|.++++|++|+.
T Consensus 219 d~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~k 295 (1255)
T KOG0444|consen 219 DDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTK 295 (1255)
T ss_pred hhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHH
Confidence 66667777777777766 45666666677777777777776 55555566667777777777777 67777777777777
Q ss_pred hhccccccCCC-CCcccccccccceeeccCceeeeecCCCCCccCcCcEEECCCCccCCccCCccc-ccccceeeCCCCc
Q 002250 450 LYLHDNMFSGP-LPYSIGSCVSLTDINFAQNSLSGKIPDSLGSLPSLNSLNLSNNKFSGEIPISLT-YPKLSLLDLSNNQ 527 (947)
Q Consensus 450 L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~~~L~~L~ls~N~ 527 (947)
|++.+|+++-. +|..++.+.+|+.+..++|.|. .+|+.++.+..|+.|.|++|++- .+|..+. ++.|+.|||..|+
T Consensus 296 Ly~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNp 373 (1255)
T KOG0444|consen 296 LYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENP 373 (1255)
T ss_pred HHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCc
Confidence 77777776532 6777777777777777777776 67777777777777777777776 4454444 4777777777776
Q ss_pred CCCCCCCc
Q 002250 528 LAGPIPEP 535 (947)
Q Consensus 528 l~~~~p~~ 535 (947)
--..+|.+
T Consensus 374 nLVMPPKP 381 (1255)
T KOG0444|consen 374 NLVMPPKP 381 (1255)
T ss_pred CccCCCCc
Confidence 55445533
No 106
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.8e-36 Score=336.24 Aligned_cols=257 Identities=20% Similarity=0.218 Sum_probs=196.4
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
.+|++.+.||+|+||.||+|... +++.||+|... ...+.+|++++++++||||+++
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~-----------------------~~~~~~E~~il~~l~HpnIv~~ 148 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ-----------------------RGGTATEAHILRAINHPSIIQL 148 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh-----------------------hhhhHHHHHHHHhCCCCCCCCE
Confidence 56999999999999999999954 78999999641 1346789999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
++++..+...++|+|++. ++|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+|
T Consensus 149 ~~~~~~~~~~~lv~e~~~-~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~ylH---~~~IvHrDiKP~NIll~~~~~vk 222 (391)
T PHA03212 149 KGTFTYNKFTCLILPRYK-TDLYCYLAAK--RNIAICDILAIERSVLRAIQYLH---ENRIIHRDIKAENIFINHPGDVC 222 (391)
T ss_pred eEEEEECCeeEEEEecCC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHhEEEcCCCCEE
Confidence 999999999999999994 7898888763 35788999999999999999999 89999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCc------ccHHH
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDS------KDIVN 861 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~------~~~~~ 861 (947)
|+|||+|+........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..+..
T Consensus 223 L~DFG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~ 301 (391)
T PHA03212 223 LGDFGAACFPVDINAN-KYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKL 301 (391)
T ss_pred EEeCCccccccccccc-ccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHH
Confidence 9999999754322211 1224579999999999998889999999999999999999998875432110 01111
Q ss_pred HHHhhccccccc--------cc---------cccCCC---CccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 862 WVYSKMDSRDSM--------LT---------VVDPNI---SEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 862 ~~~~~~~~~~~~--------~~---------~~d~~~---~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
............ .. ...+.. .....+.+..+.+++.+|++.||++|||+.|+++
T Consensus 302 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 302 IIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred HHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 110000000000 00 000000 0111234567889999999999999999999985
No 107
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=1.1e-35 Score=319.23 Aligned_cols=262 Identities=22% Similarity=0.309 Sum_probs=207.7
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
++|++.+.||+|+||.||+|+.. +++.||||.+.... .........+.+|+++++.++||||+++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~--------------~~~~~~~~~~~~e~~~l~~l~h~~i~~~ 67 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFE--------------MMDAKARQDCVKEIDLLKQLNHPNVIKY 67 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccc--------------cCCHHHHHHHHHHHHHHHhCCCcceeee
Confidence 57888999999999999999954 78999999873211 0111234568889999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhc--CCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCC
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTC--HKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWK 785 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~ 785 (947)
++++...+..++|+||+++++|.+++... ....+++.....++.|++.||+||| +.+++||||||+||+++.++.
T Consensus 68 ~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~nil~~~~~~ 144 (267)
T cd08228 68 LDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMH---SRRVMHRDIKPANVFITATGV 144 (267)
T ss_pred eeeEEECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCCHHHEEEcCCCC
Confidence 99999999999999999999999988643 2345788899999999999999999 899999999999999999999
Q ss_pred eEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHh
Q 002250 786 PRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYS 865 (947)
Q Consensus 786 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~ 865 (947)
++|+|||.+........ ......|++.|+|||.+.+..++.++|+||||+++|||++|+.||..... +...+...
T Consensus 145 ~~l~d~g~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~---~~~~~~~~ 219 (267)
T cd08228 145 VKLGDLGLGRFFSSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM---NLFSLCQK 219 (267)
T ss_pred EEECccccceeccchhH--HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccc---cHHHHHHH
Confidence 99999999986543321 11234578899999999888899999999999999999999999854322 22222211
Q ss_pred hccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccC
Q 002250 866 KMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAE 921 (947)
Q Consensus 866 ~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~ 921 (947)
..... .+ +......+..+.+++.+||+.+|++||++.+|++.++++.
T Consensus 220 ~~~~~-------~~--~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 220 IEQCD-------YP--PLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred HhcCC-------CC--CCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 11100 01 1112234567889999999999999999999999998764
No 108
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=4.7e-36 Score=325.72 Aligned_cols=259 Identities=21% Similarity=0.304 Sum_probs=203.0
Q ss_pred hhccCCcccccccCceeEEEEEeC------CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccc
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLN------SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRH 701 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 701 (947)
.++|++.+.||+|+||.||+|..+ .+..||+|.+.... .......+.+|+.++++++|
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~----------------~~~~~~~~~~e~~~l~~l~~ 68 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA----------------SLRERIEFLNEASVMKGFTC 68 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC----------------CHHHHHHHHHHHHHHHhCCC
Confidence 478999999999999999999753 24589999873111 01123457789999999999
Q ss_pred cccceEEEEEecCCccEEEEeccCCCChHHHhhhcC--------CccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccC
Q 002250 702 VNVVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCH--------KIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDV 773 (947)
Q Consensus 702 ~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~--------~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dl 773 (947)
|||+++++++...+..++||||+++|+|.+++.... ....++..+..++.|++.|++||| +++|+||||
T Consensus 69 ~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~di 145 (288)
T cd05061 69 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDL 145 (288)
T ss_pred CCeeeEEEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCC
Confidence 999999999999999999999999999999997532 234567788899999999999999 899999999
Q ss_pred CCCCeEecCCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 002250 774 KSSNILLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPE 852 (947)
Q Consensus 774 kp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~ 852 (947)
||+||++++++.++|+|||+++...............++..|+|||.+..+.++.++|||||||++|||++ |..||...
T Consensus 146 kp~nili~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~ 225 (288)
T cd05061 146 AARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGL 225 (288)
T ss_pred ChheEEEcCCCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999986543332222222345678999999998889999999999999999999 78887432
Q ss_pred CCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 002250 853 FGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEA 920 (947)
Q Consensus 853 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 920 (947)
...+...... +......+...+..+.+++.+|++.+|++|||+.++++.|++.
T Consensus 226 -----~~~~~~~~~~----------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 226 -----SNEQVLKFVM----------DGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred -----CHHHHHHHHH----------cCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 1111111111 1111122233456799999999999999999999999999974
No 109
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.1e-35 Score=317.87 Aligned_cols=253 Identities=26% Similarity=0.404 Sum_probs=202.7
Q ss_pred hccCCcccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
++|.+.+.||+|++|.||+|....+..+|+|.+.+. ....+.+.+|+.++++++|||+++++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~------------------~~~~~~~~~E~~~l~~l~h~~i~~~~ 67 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPG------------------TMMPEAFLQEAQIMKKLRHDKLVPLY 67 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccC------------------CccHHHHHHHHHHHHhCCCCCeeeEE
Confidence 568888999999999999999887778999987321 12235688999999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRI 788 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 788 (947)
+++. .+..++||||+++++|.++++......+++..+..++.|++.||+||| +.+++||||||+||++++++.++|
T Consensus 68 ~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dl~~~Nill~~~~~~~l 143 (260)
T cd05069 68 AVVS-EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIE---RMNYIHRDLRAANILVGDNLVCKI 143 (260)
T ss_pred EEEc-CCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCeEEE
Confidence 9885 456789999999999999998755556899999999999999999999 889999999999999999999999
Q ss_pred eccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhc
Q 002250 789 ADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNWVYSKM 867 (947)
Q Consensus 789 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 867 (947)
+|||.++........ ......++..|+|||+..+..++.++||||||+++|||++ |..||.... .....+...
T Consensus 144 ~dfg~~~~~~~~~~~-~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--~~~~~~~~~--- 217 (260)
T cd05069 144 ADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMV--NREVLEQVE--- 217 (260)
T ss_pred CCCccceEccCCccc-ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHH---
Confidence 999999765433211 1112245678999999988889999999999999999999 888885321 111111111
Q ss_pred cccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhc
Q 002250 868 DSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEE 919 (947)
Q Consensus 868 ~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~ 919 (947)
... ....+...+..+.+++.+|++.+|++||+++++.+.|++
T Consensus 218 -~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 218 -RGY---------RMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred -cCC---------CCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 110 011223345678899999999999999999999999986
No 110
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=4.2e-36 Score=335.59 Aligned_cols=249 Identities=27% Similarity=0.371 Sum_probs=193.0
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
+.|+..+.||+|+||+||+|+.. +++.||||++.... .......+.+|++++++++|+||+++
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----------------~~~~~~~~~~E~~~l~~l~h~~iv~~ 137 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH----------------EDTVRRQICREIEILRDVNHPNVVKC 137 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC----------------cHHHHHHHHHHHHHHHhCCCCCccee
Confidence 56777889999999999999965 78999999983211 11223568899999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
++++..++..++||||+++|+|.+.. ..++.....++.||+.||+||| +.+|+||||||+||++++++.+|
T Consensus 138 ~~~~~~~~~~~lv~e~~~~~~L~~~~------~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~k 208 (353)
T PLN00034 138 HDMFDHNGEIQVLLEFMDGGSLEGTH------IADEQFLADVARQILSGIAYLH---RRHIVHRDIKPSNLLINSAKNVK 208 (353)
T ss_pred eeEeccCCeEEEEEecCCCCcccccc------cCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEE
Confidence 99999999999999999999986532 2456677889999999999999 89999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCcccccc-----CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHH
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYT-----CKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNW 862 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~ 862 (947)
|+|||+++....... ......||..|+|||++.. ...+.++|||||||++|||++|+.||.... ..+....
T Consensus 209 L~DfG~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~--~~~~~~~ 284 (353)
T PLN00034 209 IADFGVSRILAQTMD--PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGR--QGDWASL 284 (353)
T ss_pred Ecccccceecccccc--cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCC--CccHHHH
Confidence 999999986543221 1223468999999998743 223468999999999999999999996221 1121111
Q ss_pred HHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 863 VYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 863 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
....... ............+.+++.+||+.||++|||+.|++++
T Consensus 285 ~~~~~~~----------~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 285 MCAICMS----------QPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred HHHHhcc----------CCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1111100 0111222345568899999999999999999999975
No 111
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=9.3e-36 Score=334.87 Aligned_cols=260 Identities=23% Similarity=0.329 Sum_probs=202.4
Q ss_pred hhccCCcccccccCceeEEEEEeC------CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcc-
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLN------SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVR- 700 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~- 700 (947)
.++|.+.+.||+|+||.||+|++. .++.||||++.... .....+.+.+|++++.++.
T Consensus 36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~----------------~~~~~~~~~~E~~~l~~l~~ 99 (401)
T cd05107 36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTA----------------RSSEKQALMSELKIMSHLGP 99 (401)
T ss_pred HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCC----------------ChhHHHHHHHHHHHHHhcCC
Confidence 357888899999999999999864 24689999984211 1122356889999999997
Q ss_pred ccccceEEEEEecCCccEEEEeccCCCChHHHhhhcCC------------------------------------------
Q 002250 701 HVNVVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHK------------------------------------------ 738 (947)
Q Consensus 701 h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~------------------------------------------ 738 (947)
||||+++++++..++..++||||+++|+|.++++..+.
T Consensus 100 H~niv~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (401)
T cd05107 100 HLNIVNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYM 179 (401)
T ss_pred CCCeEEEEEEEccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCcccc
Confidence 99999999999999999999999999999999975321
Q ss_pred ------------------------------------------------------ccCCHHHHHHHHHHHHHHHHHHhcCC
Q 002250 739 ------------------------------------------------------IEMDWVVRYAIAVGAAKGLEYLHHGF 764 (947)
Q Consensus 739 ------------------------------------------------------~~~~~~~~~~i~~~ia~~l~yLH~~~ 764 (947)
..+++.....++.|++.||+|||
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH--- 256 (401)
T cd05107 180 DMSKDESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLA--- 256 (401)
T ss_pred ccCCccccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHh---
Confidence 13567778899999999999999
Q ss_pred CCCeEeccCCCCCeEecCCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh
Q 002250 765 DRPVIHRDVKSSNILLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT 844 (947)
Q Consensus 765 ~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt 844 (947)
+.+++||||||+||++++++.+||+|||+++...............++..|+|||++....++.++|||||||++|||++
T Consensus 257 ~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~ 336 (401)
T cd05107 257 SKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFT 336 (401)
T ss_pred cCCcCcccCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999986543322111223356789999999998889999999999999999998
Q ss_pred -CCCCCCCCCCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 002250 845 -GKRPIVPEFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEA 920 (947)
Q Consensus 845 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 920 (947)
|+.||.... ...... ........ ...+......+.+++.+||+.+|.+||++.++++.|+++
T Consensus 337 ~g~~P~~~~~-~~~~~~----~~~~~~~~---------~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~ 399 (401)
T cd05107 337 LGGTPYPELP-MNEQFY----NAIKRGYR---------MAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL 399 (401)
T ss_pred cCCCCCCCCC-chHHHH----HHHHcCCC---------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 888874321 111111 11111100 111222345788999999999999999999999999875
No 112
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=7.8e-36 Score=321.53 Aligned_cols=257 Identities=25% Similarity=0.343 Sum_probs=201.3
Q ss_pred cCCcccccccCceeEEEEEeCC----CcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccce
Q 002250 631 VKPENLIGKGGSGNVYKVVLNS----GKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVK 706 (947)
Q Consensus 631 ~~~~~~iG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 706 (947)
|++.+.||+|+||.||+|.... +..||||++..... .......+.+|+.+++.++||||++
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~---------------~~~~~~~~~~e~~~l~~l~h~~iv~ 65 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIH---------------TYSEIEEFLSEAACMKDFDHPNVMK 65 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcC---------------CHHHHHHHHHHHHHHHhCCCCCeee
Confidence 5678899999999999998642 36799999842110 1122457889999999999999999
Q ss_pred EEEEEecCCc------cEEEEeccCCCChHHHhhhc----CCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCC
Q 002250 707 LYCSITSEDS------NLLVYEYLPNGSLWDRLHTC----HKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSS 776 (947)
Q Consensus 707 l~~~~~~~~~------~~lv~e~~~~gsL~~~l~~~----~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~ 776 (947)
+++++..... .++||||+++|+|.+++... ....+++.....++.|++.||+||| +.+++||||||+
T Consensus 66 ~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH---~~~i~H~dlkp~ 142 (273)
T cd05035 66 LIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLS---NRNFIHRDLAAR 142 (273)
T ss_pred EEeeeccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchh
Confidence 9998876554 68999999999999998543 2346899999999999999999999 899999999999
Q ss_pred CeEecCCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCC
Q 002250 777 NILLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGD 855 (947)
Q Consensus 777 NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~ 855 (947)
||++++++.+||+|||+++...............++..|+|||++....++.++||||||+++|||++ |..||....
T Consensus 143 Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~-- 220 (273)
T cd05035 143 NCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVE-- 220 (273)
T ss_pred eEEECCCCeEEECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC--
Confidence 99999999999999999987654433222223345678999999988889999999999999999999 888874321
Q ss_pred cccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 002250 856 SKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEA 920 (947)
Q Consensus 856 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 920 (947)
...+.+.. ... .....+...+..+.+++.+|++.||++|||+.|+++.|+++
T Consensus 221 ~~~~~~~~---~~~----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 221 NHEIYDYL---RHG----------NRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred HHHHHHHH---HcC----------CCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11222211 111 11112233456789999999999999999999999999875
No 113
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=7.2e-36 Score=329.35 Aligned_cols=246 Identities=25% Similarity=0.355 Sum_probs=193.6
Q ss_pred ccccccCceeEEEEEe----CCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEEE
Q 002250 635 NLIGKGGSGNVYKVVL----NSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYCS 710 (947)
Q Consensus 635 ~~iG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 710 (947)
+.||+|+||.||+|+. .+++.||||++.... ..........+.+|+.+++.++||||++++++
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~-------------~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~ 68 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKAT-------------IVRNQKDTAHTKAERNILEAVKHPFIVDLIYA 68 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHH-------------HHhhhhhHHHHHHHHHHHHhCCCCchhceeeE
Confidence 5799999999999985 257899999983210 11112234567889999999999999999999
Q ss_pred EecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEec
Q 002250 711 ITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIAD 790 (947)
Q Consensus 711 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 790 (947)
+..++..|+||||+++++|.+++... ..+.+.....++.|++.||+||| +.+|+||||||+||+++.++.+||+|
T Consensus 69 ~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~D 143 (323)
T cd05584 69 FQTGGKLYLILEYLSGGELFMHLERE--GIFMEDTACFYLSEISLALEHLH---QQGIIYRDLKPENILLDAQGHVKLTD 143 (323)
T ss_pred EecCCeEEEEEeCCCCchHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEee
Confidence 99999999999999999999999764 34677888889999999999999 89999999999999999999999999
Q ss_pred cccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcccc
Q 002250 791 FGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDSR 870 (947)
Q Consensus 791 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 870 (947)
||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||... +............
T Consensus 144 fg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~-----~~~~~~~~~~~~~ 216 (323)
T cd05584 144 FGLCKESIHEGT--VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAE-----NRKKTIDKILKGK 216 (323)
T ss_pred CcCCeecccCCC--cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCC-----CHHHHHHHHHcCC
Confidence 999875432221 122356899999999999888999999999999999999999998532 1112222211111
Q ss_pred ccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 002250 871 DSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRP-----SMRVVVQM 916 (947)
Q Consensus 871 ~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~ev~~~ 916 (947)
. ..+......+.+++.+|++.||++|| ++.+++++
T Consensus 217 ~-----------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 217 L-----------NLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred C-----------CCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence 1 11122345678899999999999999 78887653
No 114
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=1.5e-35 Score=325.50 Aligned_cols=243 Identities=27% Similarity=0.371 Sum_probs=189.0
Q ss_pred ccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-cccccceEEEEEe
Q 002250 635 NLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-RHVNVVKLYCSIT 712 (947)
Q Consensus 635 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 712 (947)
+.||+|+||.||+|+.. +++.||||++.... .......+.+..|..++... +||||+++++++.
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--------------~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~ 66 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDV--------------VLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQ 66 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHH--------------hhhhhhHHHHHHHHHHHHhccCCCCccceeeEEE
Confidence 36899999999999965 68899999984211 01112334556677777654 8999999999999
Q ss_pred cCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEeccc
Q 002250 713 SEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFG 792 (947)
Q Consensus 713 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 792 (947)
.++..++||||+++|+|.+++... ..+++.....++.|++.||+||| +.+|+||||||+||+++.++.+||+|||
T Consensus 67 ~~~~~~lv~e~~~gg~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg 141 (316)
T cd05592 67 TKEHLFFVMEYLNGGDLMFHIQSS--GRFDEARARFYAAEIICGLQFLH---KKGIIYRDLKLDNVLLDKDGHIKIADFG 141 (316)
T ss_pred cCCEEEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHeEECCCCCEEEccCc
Confidence 999999999999999999999764 35788888999999999999999 8999999999999999999999999999
Q ss_pred cceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcccccc
Q 002250 793 LAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDSRDS 872 (947)
Q Consensus 793 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 872 (947)
+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||... +..+.........
T Consensus 142 ~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~-----~~~~~~~~i~~~~-- 212 (316)
T cd05592 142 MCKENMNGE--GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGE-----DEDELFDSILNDR-- 212 (316)
T ss_pred CCeECCCCC--CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHcCC--
Confidence 997543322 1223457899999999999888999999999999999999999998532 1111111111111
Q ss_pred ccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 002250 873 MLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVV 914 (947)
Q Consensus 873 ~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~ 914 (947)
...+......+.+++.+|++.||++||++.+.+
T Consensus 213 ---------~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l 245 (316)
T cd05592 213 ---------PHFPRWISKEAKDCLSKLFERDPTKRLGVDGDI 245 (316)
T ss_pred ---------CCCCCCCCHHHHHHHHHHccCCHHHcCCChHHH
Confidence 111222344577889999999999999876433
No 115
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=3.4e-36 Score=326.11 Aligned_cols=255 Identities=26% Similarity=0.294 Sum_probs=201.7
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
.|+..+.||+|+||+||++... +++.||||++.... .........+.+|+.++++++||||++++
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------------~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 66 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKR--------------IKKRKGEAMALNEKQILEKVNSRFVVSLA 66 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhh--------------hhhhhhHHHHHHHHHHHHhcCCCCEeeee
Confidence 3677889999999999999964 68999999983211 01112234567899999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRI 788 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 788 (947)
+++..++..++||||+++|+|.+++.......+++..+..++.|++.|++||| +.+|+||||||+||++++++.++|
T Consensus 67 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l 143 (285)
T cd05605 67 YAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLH---RERIVYRDLKPENILLDDYGHIRI 143 (285)
T ss_pred eeecCCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHEEECCCCCEEE
Confidence 99999999999999999999999987655556899999999999999999999 899999999999999999999999
Q ss_pred eccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcc
Q 002250 789 ADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMD 868 (947)
Q Consensus 789 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 868 (947)
+|||++........ .....|+..|+|||++.+..++.++||||+||++|||++|+.||..... ....+.+.....
T Consensus 144 ~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~--~~~~~~~~~~~~ 218 (285)
T cd05605 144 SDLGLAVEIPEGET---IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKE--KVKREEVERRVK 218 (285)
T ss_pred eeCCCceecCCCCc---cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCch--hhHHHHHHHHhh
Confidence 99999986543221 1234689999999999988899999999999999999999999953211 111111111111
Q ss_pred ccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 002250 869 SRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRP-----SMRVVVQM 916 (947)
Q Consensus 869 ~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~ev~~~ 916 (947)
......+......+.+++.+|++.||++|| ++.++.++
T Consensus 219 ----------~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 219 ----------EDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred ----------hcccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 111122233456688999999999999999 77787654
No 116
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=1e-35 Score=324.96 Aligned_cols=260 Identities=23% Similarity=0.338 Sum_probs=204.5
Q ss_pred hhccCCcccccccCceeEEEEEeC------CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-c
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLN------SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-R 700 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~ 700 (947)
.++|.+.+.||+|+||.||+|... ++..||||++.... .....+.+.+|+.+++++ +
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~----------------~~~~~~~~~~E~~~l~~l~~ 97 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA----------------HSSEREALMSELKIMSHLGN 97 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC----------------ChHHHHHHHHHHHHHHhccC
Confidence 467889999999999999999742 35579999873211 112345788999999999 7
Q ss_pred ccccceEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEe
Q 002250 701 HVNVVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILL 780 (947)
Q Consensus 701 h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll 780 (947)
||||+++++++...+..++||||+++|+|.++++......+++.....++.|++.|++||| +.+|+|+||||+||++
T Consensus 98 h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~ 174 (302)
T cd05055 98 HENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNVLL 174 (302)
T ss_pred CCCcceEEEEEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeehhhhccceEEE
Confidence 9999999999999999999999999999999998654445899999999999999999999 8999999999999999
Q ss_pred cCCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccH
Q 002250 781 DLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDI 859 (947)
Q Consensus 781 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~ 859 (947)
+.++.++++|||+++...............++..|+|||++..+.++.++||||+||++|||++ |..||..... ...+
T Consensus 175 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~-~~~~ 253 (302)
T cd05055 175 THGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPV-DSKF 253 (302)
T ss_pred cCCCeEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCc-hHHH
Confidence 9999999999999976543322111122345778999999999899999999999999999998 9999853221 1111
Q ss_pred HHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 002250 860 VNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEA 920 (947)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 920 (947)
.... ..... ...+...+..+.+++.+|++.+|++|||+.|+++.|+++
T Consensus 254 ~~~~----~~~~~---------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 254 YKLI----KEGYR---------MAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred HHHH----HcCCc---------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 1111 11100 011112245688999999999999999999999999874
No 117
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=4.7e-36 Score=324.01 Aligned_cols=258 Identities=22% Similarity=0.329 Sum_probs=204.4
Q ss_pred hhccCCcccccccCceeEEEEEeCC------CcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccc
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLNS------GKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRH 701 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 701 (947)
.++|++.+.||+|+||.||+|..+. +..||+|.+.... .......+.+|+.+++.++|
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~----------------~~~~~~~~~~e~~~l~~~~~ 68 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA----------------SMRERIEFLNEASVMKEFNC 68 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc----------------CHHHHHHHHHHHHHHHhCCC
Confidence 3678889999999999999998642 4689999873211 11223567889999999999
Q ss_pred cccceEEEEEecCCccEEEEeccCCCChHHHhhhcC--------CccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccC
Q 002250 702 VNVVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCH--------KIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDV 773 (947)
Q Consensus 702 ~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~--------~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dl 773 (947)
|||+++++++......++||||+++|+|.+++.... ...+++..++.++.|++.|++||| +.+++||||
T Consensus 69 ~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~di 145 (277)
T cd05032 69 HHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLA---AKKFVHRDL 145 (277)
T ss_pred CceeEEEEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccccc
Confidence 999999999999999999999999999999997532 224688899999999999999999 899999999
Q ss_pred CCCCeEecCCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 002250 774 KSSNILLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPE 852 (947)
Q Consensus 774 kp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~ 852 (947)
||+||+++.++.+||+|||+++...............++..|+|||.+..+.++.++|||||||++||+++ |..||...
T Consensus 146 ~p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 225 (277)
T cd05032 146 AARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGL 225 (277)
T ss_pred ChheEEEcCCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccC
Confidence 99999999999999999999976544332222223456789999999988889999999999999999998 88888422
Q ss_pred CCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhc
Q 002250 853 FGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEE 919 (947)
Q Consensus 853 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~ 919 (947)
......+... . ......+...+..+.+++.+||+.+|++|||+.++++.|++
T Consensus 226 --~~~~~~~~~~----~---------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 226 --SNEEVLKFVI----D---------GGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred --CHHHHHHHHh----c---------CCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 1222222211 1 11111222235678899999999999999999999999864
No 118
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-38 Score=307.85 Aligned_cols=255 Identities=26% Similarity=0.378 Sum_probs=211.3
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
+.|.+++++|+|+||.||||.++ +|+.||||.+.. ..+.+++..|+.++++++.|++|++
T Consensus 33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV-------------------~sDLQEIIKEISIMQQC~S~yVVKY 93 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV-------------------DTDLQEIIKEISIMQQCKSKYVVKY 93 (502)
T ss_pred HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc-------------------cchHHHHHHHHHHHHHcCCchhhhh
Confidence 45667899999999999999976 799999998832 2567889999999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
||.|-.....++|||||-.|++.|.++. ++.++.+...-.+....++||+||| ..+-+|||||+.|||+..+|.+|
T Consensus 94 YGSYFK~sDLWIVMEYCGAGSiSDI~R~-R~K~L~E~EIs~iL~~TLKGL~YLH---~~~KIHRDIKAGNILLNT~G~AK 169 (502)
T KOG0574|consen 94 YGSYFKHSDLWIVMEYCGAGSISDIMRA-RRKPLSEQEISAVLRDTLKGLQYLH---DLKKIHRDIKAGNILLNTDGIAK 169 (502)
T ss_pred hhhhccCCceEeehhhcCCCcHHHHHHH-hcCCccHHHHHHHHHHHHhHHHHHH---HHHHHHhhcccccEEEcccchhh
Confidence 9999999999999999999999999986 5678999999999999999999999 78889999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKM 867 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 867 (947)
++|||.|..+.+... ....+.||+.|||||++..-.|+.++||||+|++..||..|++||.+.
T Consensus 170 LADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDI--------------- 232 (502)
T KOG0574|consen 170 LADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDI--------------- 232 (502)
T ss_pred hhhccccchhhhhHH--hhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccc---------------
Confidence 999999976544322 123568999999999999989999999999999999999999998422
Q ss_pred ccccccccccc--CCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH--hhccCCC
Q 002250 868 DSRDSMLTVVD--PNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM--LEEAEPC 923 (947)
Q Consensus 868 ~~~~~~~~~~d--~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~--L~~~~~~ 923 (947)
+..+.+.-+-. |..-.-+++...++-++++.|+-+.|++|.|+.++.++ ++.+++|
T Consensus 233 HPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA~g~ 292 (502)
T KOG0574|consen 233 HPMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNAPGC 292 (502)
T ss_pred cccceeEeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCCCcc
Confidence 11111110101 11122356667789999999999999999999999875 4455555
No 119
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.2e-35 Score=326.68 Aligned_cols=199 Identities=27% Similarity=0.425 Sum_probs=171.6
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
++|++.+.||+|+||.||+|... ++..+|+|++... ........+.+|++++++++||||+++
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~----------------~~~~~~~~~~~E~~~l~~l~h~~iv~~ 68 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLE----------------IKPAIRNQIIRELQVLHECNSPYIVGF 68 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecc----------------cCHHHHHHHHHHHHHHHHCCCCcccce
Confidence 67899999999999999999966 6888999987321 011234568899999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
+++|..++..++||||+++|+|.+++... ..+++.....++.|++.|++|||+ ..+|+||||||+||+++.++.+|
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~--~~~ivH~dlkp~Nili~~~~~~k 144 (333)
T cd06650 69 YGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIK 144 (333)
T ss_pred eEEEEECCEEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh--cCCEEecCCChhhEEEcCCCCEE
Confidence 99999999999999999999999999864 347888889999999999999993 24799999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCC
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVP 851 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~ 851 (947)
|+|||++....... .....||..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 145 L~Dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 145 LCDFGVSGQLIDSM----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred EeeCCcchhhhhhc----cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 99999987543321 1234689999999999988899999999999999999999999854
No 120
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=3.9e-36 Score=327.41 Aligned_cols=259 Identities=25% Similarity=0.353 Sum_probs=203.6
Q ss_pred hhccCCcccccccCceeEEEEEeCC------CcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-c
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLNS------GKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-R 700 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~ 700 (947)
.++|+..+.||+|+||.||+|.... ...+|+|.+.... .......+.+|+.+++++ +
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~----------------~~~~~~~~~~E~~~l~~l~~ 74 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA----------------TEKDLSDLVSEMEMMKMIGK 74 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC----------------CHHHHHHHHHHHHHHHhhcC
Confidence 3578888999999999999998642 3679999873210 112335688999999999 8
Q ss_pred ccccceEEEEEecCCccEEEEeccCCCChHHHhhhc--------------CCccCCHHHHHHHHHHHHHHHHHHhcCCCC
Q 002250 701 HVNVVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTC--------------HKIEMDWVVRYAIAVGAAKGLEYLHHGFDR 766 (947)
Q Consensus 701 h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~--------------~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~ 766 (947)
|+||+++++++..++..++||||+++|+|.++++.. ....+++..++.++.|++.|++||| +.
T Consensus 75 h~~i~~~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~ 151 (293)
T cd05053 75 HKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLA---SK 151 (293)
T ss_pred CCCeeeEEEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HC
Confidence 999999999999999999999999999999999642 2346889999999999999999999 89
Q ss_pred CeEeccCCCCCeEecCCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-C
Q 002250 767 PVIHRDVKSSNILLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-G 845 (947)
Q Consensus 767 ~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g 845 (947)
+|+||||||+||++++++.+||+|||.++...............++..|+|||++.+..++.++|||||||++|||++ |
T Consensus 152 ~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g 231 (293)
T cd05053 152 KCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLG 231 (293)
T ss_pred CccccccceeeEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCC
Confidence 999999999999999999999999999986654332221222235678999999988889999999999999999998 8
Q ss_pred CCCCCCCCCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 002250 846 KRPIVPEFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEA 920 (947)
Q Consensus 846 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 920 (947)
..||.... .....+. ..... ..+.+......+.+++.+|++.+|++|||+.|+++.|+++
T Consensus 232 ~~p~~~~~--~~~~~~~----~~~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~ 291 (293)
T cd05053 232 GSPYPGIP--VEELFKL----LKEGY---------RMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRM 291 (293)
T ss_pred CCCCCCCC--HHHHHHH----HHcCC---------cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHh
Confidence 88874221 1111111 11111 1112223456788999999999999999999999999875
No 121
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=7e-36 Score=322.50 Aligned_cols=258 Identities=24% Similarity=0.332 Sum_probs=200.6
Q ss_pred hhccCCcccccccCceeEEEEEeCC------CcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccc
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLNS------GKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRH 701 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 701 (947)
.+.|.+.+.||+|+||.||+|...+ +..||+|.+... ........+.+|+.++++++|
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~----------------~~~~~~~~~~~e~~~l~~l~~ 68 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPES----------------CSEQDESDFLMEALIMSKFNH 68 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCC----------------CCHHHHHHHHHHHHHHHhCCC
Confidence 3678889999999999999999653 567899977311 011223568889999999999
Q ss_pred cccceEEEEEecCCccEEEEeccCCCChHHHhhhcCC-----ccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCC
Q 002250 702 VNVVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHK-----IEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSS 776 (947)
Q Consensus 702 ~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-----~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~ 776 (947)
+||+++++++.+.+..++||||+++++|.+++..... ..+++..+..++.||+.|++||| +.+++||||||+
T Consensus 69 ~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~ 145 (277)
T cd05036 69 QNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLE---ENHFIHRDIAAR 145 (277)
T ss_pred CCEeeEEEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchh
Confidence 9999999999999999999999999999999976432 35899999999999999999999 889999999999
Q ss_pred CeEecCCC---CeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 002250 777 NILLDLEW---KPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPE 852 (947)
Q Consensus 777 NIll~~~~---~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~ 852 (947)
||+++.++ .+||+|||+++................+..|+|||++.+..++.++|||||||++|||++ |..||...
T Consensus 146 nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~ 225 (277)
T cd05036 146 NCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGR 225 (277)
T ss_pred eEEEeccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCC
Confidence 99998754 599999999986533222111112233568999999998899999999999999999997 88898432
Q ss_pred CCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhc
Q 002250 853 FGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEE 919 (947)
Q Consensus 853 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~ 919 (947)
....+..... .... ...+...+..+.+++.+|++.+|++||++.+|+++|++
T Consensus 226 --~~~~~~~~~~---~~~~----------~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 226 --TNQEVMEFVT---GGGR----------LDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred --CHHHHHHHHH---cCCc----------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 1112222111 1100 11122334678899999999999999999999999864
No 122
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=1.4e-35 Score=323.23 Aligned_cols=264 Identities=21% Similarity=0.301 Sum_probs=200.4
Q ss_pred hccCCcccccccCceeEEEEEeCC---------------CcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHH
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLNS---------------GKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEV 693 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~~---------------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~ 693 (947)
++|++.+.||+|+||.||+|.... ...||||.+++.. .......+.+|+
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~----------------~~~~~~~~~~ei 68 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV----------------TKTARNDFLKEI 68 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC----------------CHHHHHHHHHHH
Confidence 578999999999999999987542 2358999874221 012235688999
Q ss_pred HHHhhccccccceEEEEEecCCccEEEEeccCCCChHHHhhhcC----------CccCCHHHHHHHHHHHHHHHHHHhcC
Q 002250 694 ATLSAVRHVNVVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCH----------KIEMDWVVRYAIAVGAAKGLEYLHHG 763 (947)
Q Consensus 694 ~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~----------~~~~~~~~~~~i~~~ia~~l~yLH~~ 763 (947)
+++++++|||++++++++......++||||+++++|.+++.... ....++..++.++.|++.|++|||
T Consensus 69 ~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH-- 146 (295)
T cd05097 69 KIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLA-- 146 (295)
T ss_pred HHHHhCCCCCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHH--
Confidence 99999999999999999999999999999999999999986532 124688899999999999999999
Q ss_pred CCCCeEeccCCCCCeEecCCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHH
Q 002250 764 FDRPVIHRDVKSSNILLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELV 843 (947)
Q Consensus 764 ~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell 843 (947)
+.+++||||||+||++++++.+||+|||++................++..|+|||+...+.++.++|||||||++|||+
T Consensus 147 -~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~ 225 (295)
T cd05097 147 -SLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMF 225 (295)
T ss_pred -hcCeeccccChhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHH
Confidence 8999999999999999999999999999997654433222222334577899999999888999999999999999999
Q ss_pred h--CCCCCCCCCCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhc
Q 002250 844 T--GKRPIVPEFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEE 919 (947)
Q Consensus 844 t--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~ 919 (947)
+ |..||.... ................. ..........+..+.+++.+|++.+|++||++.+|++.|++
T Consensus 226 ~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 226 TLCKEQPYSLLS--DEQVIENTGEFFRNQGR------QIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred HcCCCCCCcccC--hHHHHHHHHHhhhhccc------cccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 8 556764321 11222111111110000 00011111234579999999999999999999999999874
No 123
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=6.9e-36 Score=323.00 Aligned_cols=256 Identities=24% Similarity=0.331 Sum_probs=201.5
Q ss_pred hccCCcccccccCceeEEEEEeC------CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcccc
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN------SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHV 702 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 702 (947)
++|...+.||+|+||.||+|... ++..+|+|.+... .......+.+|++++++++|+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~-----------------~~~~~~~~~~e~~~l~~l~h~ 67 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA-----------------SESARQDFQREAELLTVLQHQ 67 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC-----------------CHHHHHHHHHHHHHHhcCCCC
Confidence 56778899999999999999742 3567899987311 112345789999999999999
Q ss_pred ccceEEEEEecCCccEEEEeccCCCChHHHhhhcCC-------------ccCCHHHHHHHHHHHHHHHHHHhcCCCCCeE
Q 002250 703 NVVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHK-------------IEMDWVVRYAIAVGAAKGLEYLHHGFDRPVI 769 (947)
Q Consensus 703 niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~~~~~~~~i~~~ia~~l~yLH~~~~~~iv 769 (947)
||+++++++......++||||+++++|.+++..... ..+++..++.++.|++.|++||| +.+++
T Consensus 68 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~~i~ 144 (280)
T cd05092 68 HIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLA---SLHFV 144 (280)
T ss_pred CCceEEEEEecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHH---HCCee
Confidence 999999999999999999999999999999976432 34789999999999999999999 89999
Q ss_pred eccCCCCCeEecCCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCC
Q 002250 770 HRDVKSSNILLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRP 848 (947)
Q Consensus 770 H~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p 848 (947)
||||||+||++++++.++|+|||++................+++.|+|||++.+..++.++|||||||++|||++ |+.|
T Consensus 145 H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p 224 (280)
T cd05092 145 HRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQP 224 (280)
T ss_pred cccccHhhEEEcCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCC
Confidence 999999999999999999999999976543322111222345678999999998889999999999999999998 8888
Q ss_pred CCCCCCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhc
Q 002250 849 IVPEFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEE 919 (947)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~ 919 (947)
|.... .. +......... ..+.+...+..+.+++.+||+.||.+||++.|+.+.|++
T Consensus 225 ~~~~~--~~---~~~~~~~~~~----------~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 225 WYQLS--NT---EAIECITQGR----------ELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred CccCC--HH---HHHHHHHcCc----------cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 84321 11 1111111111 011122344568899999999999999999999999874
No 124
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=8e-36 Score=326.64 Aligned_cols=262 Identities=23% Similarity=0.325 Sum_probs=205.7
Q ss_pred hhccCCcccccccCceeEEEEEeC--------CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLN--------SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV 699 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 699 (947)
.++|.+.+.||+|+||.||+|+.. ++..||+|.+... ........+.+|+.+++.+
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~----------------~~~~~~~~~~~E~~~l~~l 77 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDD----------------ATEKDLSDLVSEMEMMKMI 77 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccc----------------cchHHHHHHHHHHHHHHhh
Confidence 467889999999999999999741 2457999987311 1112346788999999999
Q ss_pred -cccccceEEEEEecCCccEEEEeccCCCChHHHhhhcC--------------CccCCHHHHHHHHHHHHHHHHHHhcCC
Q 002250 700 -RHVNVVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCH--------------KIEMDWVVRYAIAVGAAKGLEYLHHGF 764 (947)
Q Consensus 700 -~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~--------------~~~~~~~~~~~i~~~ia~~l~yLH~~~ 764 (947)
+||||+++++++......++||||+++|+|.+++.... ...+++..+..++.|++.||+|||
T Consensus 78 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH--- 154 (304)
T cd05101 78 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLA--- 154 (304)
T ss_pred ccCCCchheeEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHH---
Confidence 89999999999999999999999999999999997642 235788889999999999999999
Q ss_pred CCCeEeccCCCCCeEecCCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh
Q 002250 765 DRPVIHRDVKSSNILLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT 844 (947)
Q Consensus 765 ~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt 844 (947)
+.+++||||||+||++++++.+||+|||.++...............+++.|+|||++.+..++.++||||||+++|||++
T Consensus 155 ~~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~ 234 (304)
T cd05101 155 SQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 234 (304)
T ss_pred HCCeeecccccceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHc
Confidence 89999999999999999999999999999987654332222223345678999999988889999999999999999998
Q ss_pred -CCCCCCCCCCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCCC
Q 002250 845 -GKRPIVPEFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAEPC 923 (947)
Q Consensus 845 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 923 (947)
|..||... ...++.... ..... ...+...+..+.+++.+||+.+|++|||+.|+++.|+++...
T Consensus 235 ~g~~p~~~~-----~~~~~~~~~-~~~~~---------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 235 LGGSPYPGI-----PVEELFKLL-KEGHR---------MDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred CCCCCcccC-----CHHHHHHHH-HcCCc---------CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 77787321 122222111 11111 111223456788899999999999999999999999886543
No 125
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=9.3e-36 Score=317.64 Aligned_cols=252 Identities=27% Similarity=0.350 Sum_probs=205.0
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
+|.+.+.||+|++|.||+|..+ +++.|++|.+.... .......++.+|++++++++||||++++
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~---------------~~~~~~~~~~~e~~~l~~l~h~~i~~~~ 65 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSK---------------MNRREREEAIDEARVLAKLDSSYIIRYY 65 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhh---------------CCHHHHHHHHHHHHHHHhcCCCCeehhe
Confidence 3667789999999999999965 68999999883211 1123456788999999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRI 788 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 788 (947)
+++..++..++||||+++++|.+++.......+++..+..++.|++.|++||| +.+++||||||+||+++.++.++|
T Consensus 66 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH---~~~i~h~dl~~~nili~~~~~~~l 142 (256)
T cd08529 66 ESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLH---SKKILHRDIKSLNLFLDAYDNVKI 142 (256)
T ss_pred eeeccCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEeCCCCEEE
Confidence 99999999999999999999999998765567899999999999999999999 899999999999999999999999
Q ss_pred eccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcc
Q 002250 789 ADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMD 868 (947)
Q Consensus 789 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 868 (947)
+|||.++........ .....|++.|+|||+..+..++.++|+||||+++|||++|+.||.... .. ........
T Consensus 143 ~df~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~~---~~~~~~~~ 215 (256)
T cd08529 143 GDLGVAKLLSDNTNF--ANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANN--QG---ALILKIIR 215 (256)
T ss_pred cccccceeccCccch--hhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCC--HH---HHHHHHHc
Confidence 999998866543221 223468899999999998889999999999999999999999985321 11 11111111
Q ss_pred ccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 869 SRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 869 ~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
...+.........+.+++.+||+.+|++||++.++++.
T Consensus 216 ----------~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 216 ----------GVFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred ----------CCCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 11122233445678999999999999999999999874
No 126
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=4.5e-35 Score=314.53 Aligned_cols=261 Identities=23% Similarity=0.335 Sum_probs=209.5
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
++|++.+.||+|+||.||+|... +|+.||+|.++.... ........+.+|++++++++|+|++++
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--------------~~~~~~~~~~~ei~~l~~~~~~~i~~~ 67 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEM--------------MDAKARQDCLKEIDLLKQLDHPNVIKY 67 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccc--------------cchhhHHHHHHHHHHHHhCCCCCeeee
Confidence 57888999999999999999976 899999998842111 111234678899999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhc--CCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCC
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTC--HKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWK 785 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~ 785 (947)
++++..++..++||||+++++|.+++... ....+++..+..++.+++.|++||| +.+|+||||+|+||+++.++.
T Consensus 68 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~nil~~~~~~ 144 (267)
T cd08224 68 LASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMH---SKRIMHRDIKPANVFITATGV 144 (267)
T ss_pred eeeeecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecCCcChhhEEECCCCc
Confidence 99999999999999999999999998753 2355789999999999999999999 899999999999999999999
Q ss_pred eEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHh
Q 002250 786 PRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYS 865 (947)
Q Consensus 786 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~ 865 (947)
++++|||++......... .....++..|+|||.+.+..++.++|||||||++|||++|+.||.... .+..+....
T Consensus 145 ~~l~d~~~~~~~~~~~~~--~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---~~~~~~~~~ 219 (267)
T cd08224 145 VKLGDLGLGRFFSSKTTA--AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK---MNLYSLCKK 219 (267)
T ss_pred EEEeccceeeeccCCCcc--cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC---ccHHHHHhh
Confidence 999999998765433211 123457889999999988889999999999999999999999985332 222222111
Q ss_pred hccccccccccccCCCCccCH-HHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccC
Q 002250 866 KMDSRDSMLTVVDPNISEILK-EDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAE 921 (947)
Q Consensus 866 ~~~~~~~~~~~~d~~~~~~~~-~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~ 921 (947)
... ....+.+. .....+.+++.+|++.+|++|||+.+++++|+++.
T Consensus 220 ~~~----------~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 220 IEK----------CDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred hhc----------CCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 111 11111222 34557889999999999999999999999998864
No 127
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=2.6e-35 Score=321.54 Aligned_cols=264 Identities=21% Similarity=0.303 Sum_probs=203.6
Q ss_pred hccCCcccccccCceeEEEEEeCC-----------------CcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHH
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLNS-----------------GKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDA 691 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (947)
.+|++.+.||+|+||.||+|.... +..||+|++.... .......+.+
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~----------------~~~~~~~~~~ 68 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA----------------SDNAREDFLK 68 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc----------------CHHHHHHHHH
Confidence 578899999999999999988542 2458999873211 1123467889
Q ss_pred HHHHHhhccccccceEEEEEecCCccEEEEeccCCCChHHHhhhcC---------CccCCHHHHHHHHHHHHHHHHHHhc
Q 002250 692 EVATLSAVRHVNVVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCH---------KIEMDWVVRYAIAVGAAKGLEYLHH 762 (947)
Q Consensus 692 E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~---------~~~~~~~~~~~i~~~ia~~l~yLH~ 762 (947)
|++++++++||||+++++++..++..++||||+++++|.+++.... ...+++...+.++.|++.||+|||
T Consensus 69 e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH- 147 (296)
T cd05051 69 EVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLE- 147 (296)
T ss_pred HHHHHHhcCCCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHH-
Confidence 9999999999999999999999999999999999999999997643 126899999999999999999999
Q ss_pred CCCCCeEeccCCCCCeEecCCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHH
Q 002250 763 GFDRPVIHRDVKSSNILLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMEL 842 (947)
Q Consensus 763 ~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~el 842 (947)
+.+|+||||||+||+++.++.++|+|||+++...............++..|+|||++..+.++.++|||||||++|||
T Consensus 148 --~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el 225 (296)
T cd05051 148 --SLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEI 225 (296)
T ss_pred --HcCccccccchhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHH
Confidence 899999999999999999999999999999865443322223334567889999999888899999999999999999
Q ss_pred Hh--CCCCCCCCCCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhc
Q 002250 843 VT--GKRPIVPEFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEE 919 (947)
Q Consensus 843 lt--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~ 919 (947)
++ |..||... .................. ......+...+.++.+++.+|++.||++|||+.|+++.|++
T Consensus 226 ~~~~~~~p~~~~--~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 226 LTLCREQPYEHL--TDQQVIENAGHFFRDDGR------QIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred HhcCCCCCCCCc--ChHHHHHHHHhccccccc------cccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 98 66676321 111222211111100000 00011122334678999999999999999999999999874
No 128
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1.5e-35 Score=322.24 Aligned_cols=259 Identities=25% Similarity=0.332 Sum_probs=202.2
Q ss_pred ccCCcccccccCceeEEEEEeC------CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccc
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN------SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVN 703 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n 703 (947)
+|++.+.||+|+||.||+|... ....+|+|.+.... .......+.+|+.+++.++|||
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~----------------~~~~~~~~~~E~~~l~~l~h~~ 64 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA----------------SSSELRDLLSEFNLLKQVNHPH 64 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC----------------CHHHHHHHHHHHHHHhhCCCCC
Confidence 3677889999999999999853 23568888873211 0122356889999999999999
Q ss_pred cceEEEEEecCCccEEEEeccCCCChHHHhhhcC----------------------CccCCHHHHHHHHHHHHHHHHHHh
Q 002250 704 VVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCH----------------------KIEMDWVVRYAIAVGAAKGLEYLH 761 (947)
Q Consensus 704 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~----------------------~~~~~~~~~~~i~~~ia~~l~yLH 761 (947)
|+++++.+..++..++||||+++++|.+++.... ...+++..++.++.|++.|++|||
T Consensus 65 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH 144 (290)
T cd05045 65 VIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLA 144 (290)
T ss_pred EeeEEEEEecCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999986431 135789999999999999999999
Q ss_pred cCCCCCeEeccCCCCCeEecCCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHH
Q 002250 762 HGFDRPVIHRDVKSSNILLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLME 841 (947)
Q Consensus 762 ~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~e 841 (947)
+.+++||||||+||++++++.+||+|||+++...............++..|+|||++.+..++.++||||||+++||
T Consensus 145 ---~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~e 221 (290)
T cd05045 145 ---EMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWE 221 (290)
T ss_pred ---HCCeehhhhhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHH
Confidence 89999999999999999999999999999976543322222223345678999999988889999999999999999
Q ss_pred HHh-CCCCCCCCCCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 002250 842 LVT-GKRPIVPEFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEA 920 (947)
Q Consensus 842 llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 920 (947)
|++ |..||... ....+..... .... .+.+......+.+++.+|++.+|++||++.|+++.|+++
T Consensus 222 l~t~g~~p~~~~--~~~~~~~~~~----~~~~---------~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~ 286 (290)
T cd05045 222 IVTLGGNPYPGI--APERLFNLLK----TGYR---------MERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKM 286 (290)
T ss_pred HHhcCCCCCCCC--CHHHHHHHHh----CCCC---------CCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHH
Confidence 999 99888432 1112222211 1100 111223345688999999999999999999999999986
Q ss_pred CC
Q 002250 921 EP 922 (947)
Q Consensus 921 ~~ 922 (947)
-.
T Consensus 287 ~~ 288 (290)
T cd05045 287 MV 288 (290)
T ss_pred Hh
Confidence 43
No 129
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=4e-35 Score=312.70 Aligned_cols=249 Identities=26% Similarity=0.360 Sum_probs=201.0
Q ss_pred hccCCcccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
++|++.+.||+|+||.||+|... |+.||+|.+.. ....+.+.+|+.++++++|+|+++++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~-------------------~~~~~~~~~e~~~l~~l~~~~i~~~~ 65 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKN-------------------DATAQAFLAEASVMTQLRHSNLVQLL 65 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCC-------------------CchHHHHHHHHHHHHhCCCCCeeeEE
Confidence 57888999999999999999876 78899998721 12245688999999999999999999
Q ss_pred EEEe-cCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 709 CSIT-SEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 709 ~~~~-~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
+++. .++..++||||+++++|.++++......+++.....++.|++.|++||| +.+++||||||+||++++++.+|
T Consensus 66 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~k 142 (256)
T cd05082 66 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---ANNFVHRDLAARNVLVSEDNVAK 142 (256)
T ss_pred EEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeccccchheEEEcCCCcEE
Confidence 9764 4566899999999999999998765556899999999999999999999 89999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHhh
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNWVYSK 866 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~ 866 (947)
++|||++........ ...++..|+|||++....++.++||||||+++|||++ |+.||... ...+.....
T Consensus 143 l~dfg~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~-----~~~~~~~~~ 212 (256)
T cd05082 143 VSDFGLTKEASSTQD-----TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI-----PLKDVVPRV 212 (256)
T ss_pred ecCCccceeccccCC-----CCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC-----CHHHHHHHH
Confidence 999999875433221 2234678999999988889999999999999999998 99888422 222221111
Q ss_pred ccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 002250 867 MDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEA 920 (947)
Q Consensus 867 ~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 920 (947)
..... .......+..+.+++.+|++.+|++|||+.++++.|+++
T Consensus 213 -~~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 213 -EKGYK---------MDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred -hcCCC---------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 11110 111223456788999999999999999999999999864
No 130
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.4e-35 Score=325.12 Aligned_cols=261 Identities=23% Similarity=0.330 Sum_probs=203.5
Q ss_pred hhccCCcccccccCceeEEEEEeC--------CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLN--------SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV 699 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 699 (947)
.++|.+.+.||+|+||.||+|+.. ++..+|+|.+.+.. .......+.+|+.+++++
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~----------------~~~~~~~~~~e~~~l~~l 80 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA----------------TEKDLSDLISEMEMMKMI 80 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC----------------ChHHHHHHHHHHHHHHHh
Confidence 367999999999999999999853 23569999884211 112345688899999999
Q ss_pred -cccccceEEEEEecCCccEEEEeccCCCChHHHhhhcCC--------------ccCCHHHHHHHHHHHHHHHHHHhcCC
Q 002250 700 -RHVNVVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHK--------------IEMDWVVRYAIAVGAAKGLEYLHHGF 764 (947)
Q Consensus 700 -~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--------------~~~~~~~~~~i~~~ia~~l~yLH~~~ 764 (947)
+||||+++++++..++..++||||+++|+|.+++..... ..+++..+..++.|++.||+|||
T Consensus 81 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH--- 157 (307)
T cd05098 81 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLA--- 157 (307)
T ss_pred cCCCCEeeEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---
Confidence 799999999999999999999999999999999976421 34789999999999999999999
Q ss_pred CCCeEeccCCCCCeEecCCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh
Q 002250 765 DRPVIHRDVKSSNILLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT 844 (947)
Q Consensus 765 ~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt 844 (947)
+.+++||||||+||++++++.++|+|||.++...............++..|+|||++.+..++.++|||||||++|||++
T Consensus 158 ~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~ 237 (307)
T cd05098 158 SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 237 (307)
T ss_pred HCCcccccccHHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHc
Confidence 89999999999999999999999999999876543221111112234568999999998889999999999999999998
Q ss_pred -CCCCCCCCCCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCC
Q 002250 845 -GKRPIVPEFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAEP 922 (947)
Q Consensus 845 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 922 (947)
|..||... ...+.... ..... ..+.+......+.+++.+|++.+|++|||+.++++.|+++.+
T Consensus 238 ~g~~p~~~~-----~~~~~~~~-~~~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~ 301 (307)
T cd05098 238 LGGSPYPGV-----PVEELFKL-LKEGH---------RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILA 301 (307)
T ss_pred CCCCCCCcC-----CHHHHHHH-HHcCC---------CCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHH
Confidence 88887321 11111111 11111 112223345678889999999999999999999999988543
No 131
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.4e-35 Score=327.45 Aligned_cols=247 Identities=25% Similarity=0.319 Sum_probs=192.7
Q ss_pred cCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHH---hhccccccce
Q 002250 631 VKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATL---SAVRHVNVVK 706 (947)
Q Consensus 631 ~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l---~~l~h~niv~ 706 (947)
|++.+.||+|+||.||+|... +++.||||++.... .......+.+.+|+.++ ++++||||++
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~--------------~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~ 66 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGD--------------IIARDEVESLMCEKRIFETANSERHPFLVN 66 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHH--------------hhhhhHHHHHHHHHHHHHhccccCCCChhc
Confidence 567889999999999999965 68999999984211 01112345566676655 5668999999
Q ss_pred EEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCe
Q 002250 707 LYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKP 786 (947)
Q Consensus 707 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 786 (947)
+++++..++..|+||||+++|+|..+++. ..+++.....++.|++.||+||| +.+|+||||||+||+++.++.+
T Consensus 67 ~~~~~~~~~~~~lv~E~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrdlkp~Nill~~~~~~ 140 (324)
T cd05589 67 LFACFQTEDHVCFVMEYAAGGDLMMHIHT---DVFSEPRAVFYAACVVLGLQYLH---ENKIVYRDLKLDNLLLDTEGFV 140 (324)
T ss_pred eeeEEEcCCEEEEEEcCCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCcE
Confidence 99999999999999999999999988865 35899999999999999999999 8999999999999999999999
Q ss_pred EEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 002250 787 RIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSK 866 (947)
Q Consensus 787 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 866 (947)
||+|||+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||... +..+.....
T Consensus 141 kL~Dfg~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~-----~~~~~~~~i 213 (324)
T cd05589 141 KIADFGLCKEGMGFG--DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGD-----DEEEVFDSI 213 (324)
T ss_pred EeCcccCCccCCCCC--CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCC-----CHHHHHHHH
Confidence 999999987432221 1223457899999999999989999999999999999999999998532 111211111
Q ss_pred ccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 002250 867 MDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRP-----SMRVVVQ 915 (947)
Q Consensus 867 ~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~ev~~ 915 (947)
..... ..+......+.+++.+|++.||.+|| ++.++++
T Consensus 214 ~~~~~-----------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 214 VNDEV-----------RYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred HhCCC-----------CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 11111 11122345678899999999999999 4666655
No 132
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=2e-35 Score=325.21 Aligned_cols=239 Identities=26% Similarity=0.341 Sum_probs=189.6
Q ss_pred ccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-cccccceEEEEEe
Q 002250 635 NLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-RHVNVVKLYCSIT 712 (947)
Q Consensus 635 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 712 (947)
+.||+|+||+||+|+.+ +++.||||++.... .........+..|..++..+ +||||+++++++.
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~--------------~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~ 66 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDV--------------ILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQ 66 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHH--------------HhhccHHHHHHHHHHHHHhccCCCchhceeeEEE
Confidence 46899999999999965 68899999983210 11123445677888888876 6999999999999
Q ss_pred cCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEeccc
Q 002250 713 SEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFG 792 (947)
Q Consensus 713 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 792 (947)
..+..|+||||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||
T Consensus 67 ~~~~~~iv~Ey~~~g~L~~~i~~~--~~l~~~~~~~~~~ql~~~L~~lH---~~~ivH~dlkp~NIli~~~~~~kL~DfG 141 (320)
T cd05590 67 TPDRLFFVMEFVNGGDLMFHIQKS--RRFDEARARFYAAEITSALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFG 141 (320)
T ss_pred cCCEEEEEEcCCCCchHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeeCC
Confidence 999999999999999999998764 35788899999999999999999 8999999999999999999999999999
Q ss_pred cceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcccccc
Q 002250 793 LAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDSRDS 872 (947)
Q Consensus 793 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 872 (947)
+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||... +.............
T Consensus 142 ~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~-----~~~~~~~~i~~~~~- 213 (320)
T cd05590 142 MCKEGIFNGK--TTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAE-----NEDDLFEAILNDEV- 213 (320)
T ss_pred CCeecCcCCC--cccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCC-----CHHHHHHHHhcCCC-
Confidence 9875432211 123456899999999999888999999999999999999999999532 11122111111111
Q ss_pred ccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCH
Q 002250 873 MLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSM 910 (947)
Q Consensus 873 ~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~ 910 (947)
..+......+.+++.+|++.||++||++
T Consensus 214 ----------~~~~~~~~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 214 ----------VYPTWLSQDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred ----------CCCCCCCHHHHHHHHHHcccCHHHCCCC
Confidence 1111234567889999999999999998
No 133
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.2e-35 Score=327.81 Aligned_cols=240 Identities=26% Similarity=0.298 Sum_probs=187.3
Q ss_pred ccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHH-HHhhccccccceEEEEEe
Q 002250 635 NLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVA-TLSAVRHVNVVKLYCSIT 712 (947)
Q Consensus 635 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~ 712 (947)
+.||+|+||+||+|+.. +|+.||||++.... .........+..|.. +++.++||||+++++++.
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--------------~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~ 66 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKA--------------ILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQ 66 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHH--------------HhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEE
Confidence 46899999999999965 78999999983211 011122234445544 567889999999999999
Q ss_pred cCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEeccc
Q 002250 713 SEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFG 792 (947)
Q Consensus 713 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 792 (947)
.++..++||||+++|+|.+++... ..+++.....++.||+.||+||| +.+|+||||||+||+++.++.+||+|||
T Consensus 67 ~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~givH~dikp~NIll~~~~~~kl~Dfg 141 (323)
T cd05575 67 TADKLYFVLDYVNGGELFFHLQRE--RSFPEPRARFYAAEIASALGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFG 141 (323)
T ss_pred eCCEEEEEEcCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeccC
Confidence 999999999999999999999763 45788888999999999999999 8999999999999999999999999999
Q ss_pred cceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcccccc
Q 002250 793 LAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDSRDS 872 (947)
Q Consensus 793 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 872 (947)
+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||... +..+...........
T Consensus 142 ~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~-----~~~~~~~~i~~~~~~ 214 (323)
T cd05575 142 LCKEGIEHS--KTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR-----DTAEMYDNILNKPLR 214 (323)
T ss_pred CCcccccCC--CccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCC-----CHHHHHHHHHcCCCC
Confidence 987532221 1223456899999999999989999999999999999999999998532 222222221111110
Q ss_pred ccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHH
Q 002250 873 MLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMR 911 (947)
Q Consensus 873 ~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 911 (947)
........+.+++.+|++.||.+||++.
T Consensus 215 -----------~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 215 -----------LKPNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred -----------CCCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 1112245678899999999999999985
No 134
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1.1e-35 Score=323.12 Aligned_cols=258 Identities=25% Similarity=0.391 Sum_probs=203.0
Q ss_pred hhccCCcccccccCceeEEEEEeC------CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccc
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLN------SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRH 701 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 701 (947)
.++|++.+.||+|+||.||+|..+ ++..||+|++.... .......+.+|+.++++++|
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~----------------~~~~~~~~~~ei~~l~~l~h 67 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA----------------SADMQADFQREAALMAEFDH 67 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc----------------CHHHHHHHHHHHHHHHhcCC
Confidence 367889999999999999999853 46789999873211 11224568899999999999
Q ss_pred cccceEEEEEecCCccEEEEeccCCCChHHHhhhcC--------------------CccCCHHHHHHHHHHHHHHHHHHh
Q 002250 702 VNVVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCH--------------------KIEMDWVVRYAIAVGAAKGLEYLH 761 (947)
Q Consensus 702 ~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~--------------------~~~~~~~~~~~i~~~ia~~l~yLH 761 (947)
|||+++++++..+...++||||+++|+|.+++.... ...+++..++.++.|++.||+|||
T Consensus 68 ~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH 147 (288)
T cd05050 68 PNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLS 147 (288)
T ss_pred CchheEEEEEcCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999997431 134688889999999999999999
Q ss_pred cCCCCCeEeccCCCCCeEecCCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHH
Q 002250 762 HGFDRPVIHRDVKSSNILLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLME 841 (947)
Q Consensus 762 ~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~e 841 (947)
+.+++||||||+||++++++.++|+|||.+.................+..|+|||.+.+..++.++|||||||++||
T Consensus 148 ---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e 224 (288)
T cd05050 148 ---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWE 224 (288)
T ss_pred ---hCCeecccccHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHH
Confidence 89999999999999999999999999999876543322111222234678999999988889999999999999999
Q ss_pred HHh-CCCCCCCCCCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhc
Q 002250 842 LVT-GKRPIVPEFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEE 919 (947)
Q Consensus 842 llt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~ 919 (947)
|++ |..||... ...+....... ......+...+..+.+++.+|++.+|++|||+.|+++.|++
T Consensus 225 l~~~~~~p~~~~-----~~~~~~~~~~~----------~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 225 IFSYGMQPYYGM-----AHEEVIYYVRD----------GNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred HHhCCCCCCCCC-----CHHHHHHHHhc----------CCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 998 88887432 11122211111 11111222345678899999999999999999999999874
No 135
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.6e-35 Score=316.81 Aligned_cols=256 Identities=28% Similarity=0.431 Sum_probs=206.5
Q ss_pred hhccCCcccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
.++|.+.+.||+|+||.||+|..++++.||||.+... .....++.+|+.++++++|+||+++
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~------------------~~~~~~~~~e~~~l~~l~h~~i~~~ 66 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPG------------------TMSPEAFLQEAQIMKKLRHDKLVQL 66 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCC------------------ccCHHHHHHHHHHHhhCCCCCEeee
Confidence 3678899999999999999999888889999988421 1234578899999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
++++..+...++||||+++++|.+++.......+++..+..++.|++.|++||| +.+++||||||+||++++++.++
T Consensus 67 ~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh---~~~i~h~di~p~nili~~~~~~~ 143 (261)
T cd05034 67 YAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLE---SRNYIHRDLAARNILVGENLVCK 143 (261)
T ss_pred eeeeecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcchheEEEcCCCCEE
Confidence 999999899999999999999999998765567899999999999999999999 88999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHhh
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNWVYSK 866 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~ 866 (947)
++|||.+......... ......++..|+|||.+.+..++.++||||+|+++||+++ |+.||... ......+..
T Consensus 144 l~d~g~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~--~~~~~~~~~--- 217 (261)
T cd05034 144 IADFGLARLIEDDEYT-AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGM--TNREVLEQV--- 217 (261)
T ss_pred ECccccceeccchhhh-hhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHH---
Confidence 9999999765432211 1112234568999999998889999999999999999999 89998432 111111111
Q ss_pred ccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 002250 867 MDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEA 920 (947)
Q Consensus 867 ~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 920 (947)
..... ...+...+..+.+++.+|++.+|++||++.++.+.|+.+
T Consensus 218 ~~~~~----------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~~ 261 (261)
T cd05034 218 ERGYR----------MPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLEDY 261 (261)
T ss_pred HcCCC----------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhcC
Confidence 11000 011112245688999999999999999999999998763
No 136
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1.1e-35 Score=330.94 Aligned_cols=264 Identities=22% Similarity=0.305 Sum_probs=194.2
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
+|++.+.||+|+||.||+|+.. +++.||||++.... ........+.+|+.++++++||||++++
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------------~~~~~~~~~~~E~~~l~~l~hpniv~~~ 65 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVF---------------EHVSDATRILREIKLLRLLRHPDIVEIK 65 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhh---------------ccchhHHHHHHHHHHHHhCCCCCEeeec
Confidence 4778899999999999999955 78999999883110 1112335678999999999999999999
Q ss_pred EEEecCC-----ccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCC
Q 002250 709 CSITSED-----SNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLE 783 (947)
Q Consensus 709 ~~~~~~~-----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~ 783 (947)
+++.... ..|+||||++ ++|.+++... ..+++.....++.|+++||+||| +.+|+||||||+||+++.+
T Consensus 66 ~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~ 139 (338)
T cd07859 66 HIMLPPSRREFKDIYVVFELME-SDLHQVIKAN--DDLTPEHHQFFLYQLLRALKYIH---TANVFHRDLKPKNILANAD 139 (338)
T ss_pred ceEeccCCCCCceEEEEEecCC-CCHHHHHHhc--ccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCC
Confidence 9885432 4699999995 6899988763 35889999999999999999999 8999999999999999999
Q ss_pred CCeEEeccccceecccCCC-CcceecccccccccCcccccc--CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHH
Q 002250 784 WKPRIADFGLAKIVQTGEA-GDLTHVIAGTHGYIAPEYAYT--CKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIV 860 (947)
Q Consensus 784 ~~~kl~DfG~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~ 860 (947)
+.+||+|||+++....... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ....
T Consensus 140 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~--~~~~ 217 (338)
T cd07859 140 CKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNV--VHQL 217 (338)
T ss_pred CcEEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCCh--HHHH
Confidence 9999999999975433221 111223468999999999865 5788999999999999999999999854211 0111
Q ss_pred HHHHhhccc-----------cc--cccccccC----CCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 861 NWVYSKMDS-----------RD--SMLTVVDP----NISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 861 ~~~~~~~~~-----------~~--~~~~~~d~----~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
..+...... .. ........ ............+.+++.+|++.||++|||+.|++++
T Consensus 218 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 218 DLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred HHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 111000000 00 00000000 0001111233567899999999999999999999964
No 137
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=2e-38 Score=338.45 Aligned_cols=385 Identities=25% Similarity=0.373 Sum_probs=246.7
Q ss_pred CCcccceeeccCcccc-CcCchhhhcCCCccEEeCcCccCcCCCCCcccccccceeecCCCCccCccCcccccccCCCce
Q 002250 59 GLQALQKINLGTNFLY-GTITEGLKSCTRLQVLDLGNNSFSGEVPDLSMLHELSFLNLNSSGISGKFPWKSLENLTNLEF 137 (947)
Q Consensus 59 ~l~~L~~L~L~~n~i~-~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~l~~l~~L~~ 137 (947)
-|+.++-.++++|.++ +..|.....++.++.|-|...++...+..++.|.+|++|.+++|++.... ..++.|+.|+.
T Consensus 5 VLpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~~vPeEL~~lqkLEHLs~~HN~L~~vh--GELs~Lp~LRs 82 (1255)
T KOG0444|consen 5 VLPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLEQVPEELSRLQKLEHLSMAHNQLISVH--GELSDLPRLRS 82 (1255)
T ss_pred ccceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhhhChHHHHHHhhhhhhhhhhhhhHhhh--hhhccchhhHH
Confidence 3455667777777777 45777777777777777777777766666777777777777777765333 35677777777
Q ss_pred eeCCCCCCCCCCCChhhcccccCcEEEccCccccccCCccCCCCCCCCEEECcCcccccccCccccCCCCCcEEEeeccc
Q 002250 138 LSLGDNPFDPSPFPMEVLKLEKLYWLYLTNCSVTGQIPEGIGNLTQLQNLELSDNELFGEIPAGIVKLNKLWQLELYNNS 217 (947)
Q Consensus 138 L~Ls~n~i~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~ 217 (947)
+++.+|++...++|..+..+.. |+.||||+|++. +.|..+...+++-.|+||+|+
T Consensus 83 v~~R~N~LKnsGiP~diF~l~d------------------------Lt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~ 137 (1255)
T KOG0444|consen 83 VIVRDNNLKNSGIPTDIFRLKD------------------------LTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNN 137 (1255)
T ss_pred HhhhccccccCCCCchhccccc------------------------ceeeecchhhhh-hcchhhhhhcCcEEEEcccCc
Confidence 7777777766655555554444 445555555543 444455555555555555555
Q ss_pred ccccCCccCCCCCCccEEeccCCCCCCCCccccccCCCCEEEccCccCcccCCCCccCCCcCcEEEccCcccc-ccCCcC
Q 002250 218 LSGRLPVGFSNLTNLMNFDVSQNRLEGDLSELRFLNQLSSLHLFENQFSGEIPEEFGEFKHLTELSLYTNRLT-GTLPQK 296 (947)
Q Consensus 218 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~-~~~p~~ 296 (947)
|..++-..|-+++.|-.||||+|++..+|+.+..+..|+.|.|++|.+....-..+..+++|+.|.+++.+-+ ..+|.+
T Consensus 138 IetIPn~lfinLtDLLfLDLS~NrLe~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Pts 217 (1255)
T KOG0444|consen 138 IETIPNSLFINLTDLLFLDLSNNRLEMLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTS 217 (1255)
T ss_pred cccCCchHHHhhHhHhhhccccchhhhcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCc
Confidence 5533333455566666666666666666666666666666666666665443444555666777777766544 355666
Q ss_pred ccCcccccccccccccccCCCCCCcccCCccceeeecccccCCcCCccccCCCCccEEEcccccccccCCCCCCCCCCcc
Q 002250 297 LGSWADFNYVDVSENLLTGPIPPDMCKTGAMTDLLVLQNNFNGTVPETYANCKSLIRFRVNNNSLSGTIPPGIWSLPNLS 376 (947)
Q Consensus 297 l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 376 (947)
+..+.+|..+|+|.|.+. .+|+++.++.+|++|+|++|.|+ .+
T Consensus 218 ld~l~NL~dvDlS~N~Lp-------------------------~vPecly~l~~LrrLNLS~N~it-eL----------- 260 (1255)
T KOG0444|consen 218 LDDLHNLRDVDLSENNLP-------------------------IVPECLYKLRNLRRLNLSGNKIT-EL----------- 260 (1255)
T ss_pred hhhhhhhhhccccccCCC-------------------------cchHHHhhhhhhheeccCcCcee-ee-----------
Confidence 666666666666666655 33444444444444444444444 22
Q ss_pred eeccccCCcCCCCCCcccccccccEEEccCccccccCCCCCCCCCcceEEEcccCccc-CCCCcccccccccchhhcccc
Q 002250 377 IIDLSTNQFEGPVTDDIGNAKSLALLLLANNRFSGELPSKISEASSLVSIQLSLNQFS-GQIPLDIGKLKKLSSLYLHDN 455 (947)
Q Consensus 377 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N 455 (947)
.-..+...+|+.|+||.|+++ .+|.+++.+++|+.|.+.+|+++ .-+|..+++|.+|+.+..++|
T Consensus 261 -------------~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN 326 (1255)
T KOG0444|consen 261 -------------NMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANN 326 (1255)
T ss_pred -------------eccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhcc
Confidence 222333445555555555555 56666666666666666666655 247888888888888888888
Q ss_pred ccCCCCCcccccccccceeeccCceeeeecCCCCCccCcCcEEECCCCccCCccCCcccc-cccceeeC
Q 002250 456 MFSGPLPYSIGSCVSLTDINFAQNSLSGKIPDSLGSLPSLNSLNLSNNKFSGEIPISLTY-PKLSLLDL 523 (947)
Q Consensus 456 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~l 523 (947)
.+. ..|..+..|..|+.|.|++|+|- .+|+++.-|+.|+.|||.+|.=---+|..-.. .+|+.-++
T Consensus 327 ~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnLVMPPKP~da~~~lefYNI 393 (1255)
T KOG0444|consen 327 KLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNLVMPPKPNDARKKLEFYNI 393 (1255)
T ss_pred ccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCccCCCCcchhhhcceeeec
Confidence 887 78888999999999999999998 88999999999999999999754344443322 45555443
No 138
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=2.9e-35 Score=329.98 Aligned_cols=204 Identities=25% Similarity=0.390 Sum_probs=172.9
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
++|++.+.||+|+||+||+|+.. +++.||||++.... .........+.+|+.++.+++||||+++
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~--------------~~~~~~~~~~~~E~~il~~~~~~~iv~~ 66 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKAD--------------MLEKEQVGHIRAERDILVEADSLWVVKM 66 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHH--------------HHHhhHHHHHHHHHHHHHhCCCCCcceE
Confidence 36888999999999999999965 68999999983110 0111234567889999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
++.+.++...|+||||+++|+|.+++... ..+++.....++.|++.||+||| +.+|+||||||+|||++.++.+|
T Consensus 67 ~~~~~~~~~~~lv~E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH---~~givHrDlKp~NILi~~~~~vk 141 (363)
T cd05628 67 FYSFQDKLNLYLIMEFLPGGDMMTLLMKK--DTLTEEETQFYIAETVLAIDSIH---QLGFIHRDIKPDNLLLDSKGHVK 141 (363)
T ss_pred EEEEecCCeEEEEEcCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCCEE
Confidence 99999999999999999999999999864 45888999999999999999999 89999999999999999999999
Q ss_pred EeccccceecccCCCC---------------------------------cceecccccccccCccccccCCCCCccchHH
Q 002250 788 IADFGLAKIVQTGEAG---------------------------------DLTHVIAGTHGYIAPEYAYTCKINEKSDVYS 834 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s 834 (947)
|+|||+++........ ......+||+.|+|||++.+..++.++||||
T Consensus 142 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwS 221 (363)
T cd05628 142 LSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWS 221 (363)
T ss_pred EeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhh
Confidence 9999998754321100 0012347999999999999989999999999
Q ss_pred HHHHHHHHHhCCCCCCC
Q 002250 835 FGVVLMELVTGKRPIVP 851 (947)
Q Consensus 835 lGv~l~elltg~~p~~~ 851 (947)
|||++|||++|+.||..
T Consensus 222 lGvil~ell~G~~Pf~~ 238 (363)
T cd05628 222 LGVIMYEMLIGYPPFCS 238 (363)
T ss_pred hHHHHHHHHhCCCCCCC
Confidence 99999999999999953
No 139
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1.8e-35 Score=319.79 Aligned_cols=260 Identities=23% Similarity=0.331 Sum_probs=202.8
Q ss_pred hccCCcccccccCceeEEEEEeC-CCc----EEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccc
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGK----ELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVN 703 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n 703 (947)
++|+..+.||+|+||+||+|++. +++ .||+|++.... .......+.+|+.+++.+.|||
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~----------------~~~~~~~~~~e~~~l~~~~~~~ 70 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT----------------SPKANKEILDEAYVMAGVGSPY 70 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC----------------CHHHHHHHHHHHHHHHhcCCCC
Confidence 56888899999999999999853 454 48999873111 1123456889999999999999
Q ss_pred cceEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCC
Q 002250 704 VVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLE 783 (947)
Q Consensus 704 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~ 783 (947)
|+++++++.. ...+++|||+++|+|.++++.. ...+++..+..++.|++.||+||| +.+|+||||||+||+++++
T Consensus 71 i~~~~~~~~~-~~~~l~~~~~~~g~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~lH---~~~iiH~dlkp~Nil~~~~ 145 (279)
T cd05109 71 VCRLLGICLT-STVQLVTQLMPYGCLLDYVREN-KDRIGSQDLLNWCVQIAKGMSYLE---EVRLVHRDLAARNVLVKSP 145 (279)
T ss_pred CceEEEEEcC-CCcEEEEEcCCCCCHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccccceEEEcCC
Confidence 9999999975 4578999999999999999763 345889999999999999999999 8999999999999999999
Q ss_pred CCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHH
Q 002250 784 WKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNW 862 (947)
Q Consensus 784 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~ 862 (947)
+.+||+|||+++...............+++.|+|||...+..++.++|||||||++|||++ |..||... ....+..+
T Consensus 146 ~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~--~~~~~~~~ 223 (279)
T cd05109 146 NHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGI--PAREIPDL 223 (279)
T ss_pred CcEEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCC--CHHHHHHH
Confidence 9999999999987654322211112234678999999988889999999999999999998 88887432 12222222
Q ss_pred HHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCCCC
Q 002250 863 VYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAEPCS 924 (947)
Q Consensus 863 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 924 (947)
... ... .+.....+..+.+++.+||+.||++||++.++++.|+++...|
T Consensus 224 ~~~----~~~---------~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 224 LEK----GER---------LPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred HHC----CCc---------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 211 100 1111233456889999999999999999999999998876555
No 140
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.9e-35 Score=319.83 Aligned_cols=259 Identities=24% Similarity=0.322 Sum_probs=204.8
Q ss_pred hccCCcccccccCceeEEEEEeCC-----CcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccc
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLNS-----GKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVN 703 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n 703 (947)
++|++.+.||+|+||.||+|...+ +..||+|++... ........+.+|+.++++++|||
T Consensus 6 ~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~----------------~~~~~~~~~~~e~~~l~~l~h~n 69 (280)
T cd05043 6 DRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH----------------ASEIQVTLLLQESCLLYGLSHQN 69 (280)
T ss_pred hheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC----------------CCHHHHHHHHHHHHHHHhCCCCC
Confidence 678889999999999999999765 688999987311 11123466888999999999999
Q ss_pred cceEEEEEec-CCccEEEEeccCCCChHHHhhhcCC------ccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCC
Q 002250 704 VVKLYCSITS-EDSNLLVYEYLPNGSLWDRLHTCHK------IEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSS 776 (947)
Q Consensus 704 iv~l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~------~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~ 776 (947)
|+++++++.. +...++++||+++++|.+++..... ..+++..+..++.|++.||+||| +.+++||||||+
T Consensus 70 i~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~i~H~di~p~ 146 (280)
T cd05043 70 ILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLH---KRGVIHKDIAAR 146 (280)
T ss_pred CCeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCHh
Confidence 9999998766 5678999999999999999976422 46899999999999999999999 899999999999
Q ss_pred CeEecCCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCC
Q 002250 777 NILLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGD 855 (947)
Q Consensus 777 NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~ 855 (947)
||++++++.+||+|||+++.+.............++..|+|||++....++.++||||||+++||+++ |+.||... .
T Consensus 147 nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~--~ 224 (280)
T cd05043 147 NCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEI--D 224 (280)
T ss_pred hEEEcCCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcC--C
Confidence 99999999999999999986544332211222345778999999988889999999999999999999 99998432 1
Q ss_pred cccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccC
Q 002250 856 SKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAE 921 (947)
Q Consensus 856 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~ 921 (947)
..++..+.. .... .......+..+.+++.+||+.||++|||+.++++.|+++.
T Consensus 225 ~~~~~~~~~----~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~ 277 (280)
T cd05043 225 PFEMAAYLK----DGYR---------LAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFH 277 (280)
T ss_pred HHHHHHHHH----cCCC---------CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 112222111 1110 0111223456889999999999999999999999998765
No 141
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=2.1e-35 Score=317.05 Aligned_cols=261 Identities=22% Similarity=0.333 Sum_probs=206.9
Q ss_pred hccCCcccccccCceeEEEEEe-CCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVL-NSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
++|++.+.||+|+||.||+|.. .+++.+|||.+.... ........++.+|+.+++.++||||+++
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~--------------~~~~~~~~~~~~e~~~l~~~~h~~i~~~ 67 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFD--------------LMDAKARADCIKEIDLLKQLNHPNVIKY 67 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehh--------------hhhHHHHHHHHHHHHHHHHccCCchhhh
Confidence 4678889999999999999995 479999999873211 0111233578899999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhc--CCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCC
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTC--HKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWK 785 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~ 785 (947)
++++..++..++||||+++++|.+++... ....+++.....++.|++.|++||| +.+++|+||||+||+++.++.
T Consensus 68 ~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~ 144 (267)
T cd08229 68 YASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGV 144 (267)
T ss_pred hheeEeCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCC
Confidence 99999999999999999999999998743 2346899999999999999999999 899999999999999999999
Q ss_pred eEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHh
Q 002250 786 PRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYS 865 (947)
Q Consensus 786 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~ 865 (947)
++++|||++........ ......|+..|+|||++.+..++.++||||||+++|||++|..||..... +.......
T Consensus 145 ~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~~~~~~ 219 (267)
T cd08229 145 VKLGDLGLGRFFSSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM---NLYSLCKK 219 (267)
T ss_pred EEECcchhhhccccCCc--ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccc---hHHHHhhh
Confidence 99999999876543321 11234688999999999888899999999999999999999999853321 11121111
Q ss_pred hccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 002250 866 KMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEA 920 (947)
Q Consensus 866 ~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 920 (947)
... ...+.. ........+.+++.+||+.+|++||||.+|+++++++
T Consensus 220 ~~~-------~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 220 IEQ-------CDYPPL--PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred hhc-------CCCCCC--CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 110 000111 1123455788999999999999999999999999875
No 142
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=6.5e-36 Score=334.46 Aligned_cols=256 Identities=25% Similarity=0.323 Sum_probs=202.7
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
++|++.+.||+|+||+||+|+.. +++.||||++.... .........+.+|+++++.++||||+++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~--------------~~~~~~~~~~~~e~~~l~~~~~~~i~~~ 66 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSD--------------MIKRNQIAHVRAERDILADADSPWIVKL 66 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHH--------------HhhccHHHHHHHHHHHHHhcCCCCccch
Confidence 36888999999999999999966 78999999984211 1112345678899999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
++++.+++..++||||+++++|.+++... ..+++.....++.|++.||+||| +.+|+||||||+||+++.++.+|
T Consensus 67 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH---~~giiH~Dlkp~NIll~~~~~~k 141 (350)
T cd05573 67 YYSFQDEEHLYLVMEYMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVH---KLGFIHRDIKPDNILIDADGHIK 141 (350)
T ss_pred hhheecCCeEEEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEE
Confidence 99999999999999999999999999874 45888899999999999999999 89999999999999999999999
Q ss_pred EeccccceecccCC---------------------------CCcceecccccccccCccccccCCCCCccchHHHHHHHH
Q 002250 788 IADFGLAKIVQTGE---------------------------AGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLM 840 (947)
Q Consensus 788 l~DfG~a~~~~~~~---------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ 840 (947)
|+|||++....... .........||+.|+|||++.+..++.++|||||||++|
T Consensus 142 L~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ 221 (350)
T cd05573 142 LADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILY 221 (350)
T ss_pred eecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhh
Confidence 99999997654432 001122346899999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCC-HHHHHHH
Q 002250 841 ELVTGKRPIVPEFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPS-MRVVVQM 916 (947)
Q Consensus 841 elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-~~ev~~~ 916 (947)
||++|+.||.... ............... .++... ..+..+.+++.+|+. ||.+||+ +.+++++
T Consensus 222 ell~g~~Pf~~~~-----~~~~~~~i~~~~~~~------~~p~~~-~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 222 EMLYGFPPFYSDT-----LQETYNKIINWKESL------RFPPDP-PVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred hhccCCCCCCCCC-----HHHHHHHHhccCCcc------cCCCCC-CCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 9999999985432 111111111110100 011111 134567888999997 9999999 9999975
No 143
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=1.6e-35 Score=349.31 Aligned_cols=263 Identities=26% Similarity=0.333 Sum_probs=202.4
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
++|++.+.||+|+||.||+|... +++.||||++..... .......++.+|++++++++||||+++
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~--------------~~e~~~~rflrEi~ILs~L~HPNIVkl 67 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLS--------------ENPLLKKRFLREAKIAADLIHPGIVPV 67 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccc--------------cCHHHHHHHHHHHHHHHhCCCcCcCeE
Confidence 57889999999999999999965 689999999842210 111224578899999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcC---------CccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCe
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCH---------KIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNI 778 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~---------~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NI 778 (947)
++++.+++..++||||++||+|.+++.... ....++..+..++.||++||+||| +.+|+||||||+||
T Consensus 68 ~~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLH---s~GIIHRDLKPeNI 144 (932)
T PRK13184 68 YSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVH---SKGVLHRDLKPDNI 144 (932)
T ss_pred EEEEeeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHH---HCCccccCCchheE
Confidence 999999999999999999999999986421 134567788899999999999999 89999999999999
Q ss_pred EecCCCCeEEeccccceecccCCC----------------CcceecccccccccCccccccCCCCCccchHHHHHHHHHH
Q 002250 779 LLDLEWKPRIADFGLAKIVQTGEA----------------GDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMEL 842 (947)
Q Consensus 779 ll~~~~~~kl~DfG~a~~~~~~~~----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~el 842 (947)
+++.++.++|+|||+++....... .......+||+.|+|||++.+..++.++|||||||++|||
T Consensus 145 LLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyEL 224 (932)
T PRK13184 145 LLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQM 224 (932)
T ss_pred EEcCCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHH
Confidence 999999999999999986521110 0011234699999999999999999999999999999999
Q ss_pred HhCCCCCCCCCCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCC-CHHHHHHHhhccC
Q 002250 843 VTGKRPIVPEFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRP-SMRVVVQMLEEAE 921 (947)
Q Consensus 843 ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-t~~ev~~~L~~~~ 921 (947)
+||+.||..... .... ... ...++.......+.+..+.+++.+|++.||++|| ++.++.+.|+...
T Consensus 225 LTG~~PF~~~~~--~ki~---~~~--------~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~l 291 (932)
T PRK13184 225 LTLSFPYRRKKG--RKIS---YRD--------VILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHL 291 (932)
T ss_pred HHCCCCCCCcch--hhhh---hhh--------hccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 999999854211 1110 000 0000000001123445688899999999999995 6777777777654
No 144
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.4e-35 Score=328.79 Aligned_cols=256 Identities=23% Similarity=0.274 Sum_probs=197.4
Q ss_pred ccCCcccccccCceeEEEEEe----CCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-ccccc
Q 002250 630 AVKPENLIGKGGSGNVYKVVL----NSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-RHVNV 704 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~ni 704 (947)
+|++.+.||+|+||+||+|+. .+++.||+|++.... ........+.+.+|+.+++++ .||||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~-------------~~~~~~~~~~~~~e~~~l~~l~~~~~i 67 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAA-------------LVQKAKTVEHTRTERNVLEHVRQSPFL 67 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHH-------------HhhhhhHHHHHHHHHHHHHhccCCCCc
Confidence 377889999999999999885 258899999983211 111223345678899999999 59999
Q ss_pred ceEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCC
Q 002250 705 VKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEW 784 (947)
Q Consensus 705 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~ 784 (947)
+++++++..++..++||||+++|+|.+++... ..+++.....++.|++.||+||| +.+|+||||||+|||++.++
T Consensus 68 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nili~~~~ 142 (332)
T cd05614 68 VTLHYAFQTEAKLHLILDYVSGGEMFTHLYQR--DNFSEDEVRFYSGEIILALEHLH---KLGIVYRDIKLENILLDSEG 142 (332)
T ss_pred ccEEEEEecCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHeEECCCC
Confidence 99999999999999999999999999999763 45788899999999999999999 89999999999999999999
Q ss_pred CeEEeccccceecccCCCCcceecccccccccCccccccCC-CCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHH
Q 002250 785 KPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCK-INEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWV 863 (947)
Q Consensus 785 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~ 863 (947)
.+||+|||+++........ ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||...... .......
T Consensus 143 ~~kl~DfG~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-~~~~~~~ 220 (332)
T cd05614 143 HVVLTDFGLSKEFLSEEKE-RTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGER-NTQSEVS 220 (332)
T ss_pred CEEEeeCcCCccccccCCC-ccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCC-CCHHHHH
Confidence 9999999999765433222 122456999999999987654 788999999999999999999999543211 1111111
Q ss_pred HhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 002250 864 YSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRP-----SMRVVVQM 916 (947)
Q Consensus 864 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~ev~~~ 916 (947)
...... ++.+ +......+.+++.+|++.||++|| ++.+++++
T Consensus 221 ~~~~~~--------~~~~---~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 221 RRILKC--------DPPF---PSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred HHHhcC--------CCCC---CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 111111 1111 222345577889999999999999 67777754
No 145
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1.6e-35 Score=327.21 Aligned_cols=245 Identities=22% Similarity=0.303 Sum_probs=191.0
Q ss_pred ccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-cccccceEEEEEe
Q 002250 635 NLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-RHVNVVKLYCSIT 712 (947)
Q Consensus 635 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 712 (947)
+.||+|+||.||+|+.+ +++.||+|++.... .........+.+|+.++.++ +||||+++++++.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~--------------~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~ 66 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKEL--------------VNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQ 66 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhH--------------hcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEE
Confidence 46899999999999965 68899999984211 11112345677899988877 8999999999999
Q ss_pred cCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEeccc
Q 002250 713 SEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFG 792 (947)
Q Consensus 713 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 792 (947)
.++..++||||+++|+|.+++... ..+++.....++.|++.||+||| +.+|+||||||+||+++.++.+||+|||
T Consensus 67 ~~~~~~lv~E~~~~~~L~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dikp~Nili~~~~~~kL~DfG 141 (329)
T cd05618 67 TESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYG 141 (329)
T ss_pred eCCEEEEEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCCEEEeeCC
Confidence 999999999999999999988763 45888999999999999999999 8999999999999999999999999999
Q ss_pred cceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCC---CcccHHHHHHhhccc
Q 002250 793 LAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFG---DSKDIVNWVYSKMDS 869 (947)
Q Consensus 793 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~---~~~~~~~~~~~~~~~ 869 (947)
+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .......+.......
T Consensus 142 ~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~ 219 (329)
T cd05618 142 MCKEGLRPGD--TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE 219 (329)
T ss_pred ccccccCCCC--ccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhc
Confidence 9875322211 12245789999999999998999999999999999999999999953211 111222222222211
Q ss_pred cccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCH
Q 002250 870 RDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSM 910 (947)
Q Consensus 870 ~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~ 910 (947)
.. ...+......+.+++.+|++.||++||++
T Consensus 220 ~~----------~~~p~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 220 KQ----------IRIPRSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred CC----------CCCCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 11 11222334567789999999999999984
No 146
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=8.6e-36 Score=329.20 Aligned_cols=245 Identities=24% Similarity=0.270 Sum_probs=194.0
Q ss_pred ccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEEEEec
Q 002250 635 NLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYCSITS 713 (947)
Q Consensus 635 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 713 (947)
+.||+|+||.||+|+.. +++.||+|++.... .........+.+|+++++.++||||+++++++..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~--------------~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~ 66 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEV--------------IVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQT 66 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHH--------------hhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEc
Confidence 46899999999999954 78999999984211 1111234567789999999999999999999999
Q ss_pred CCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCC-CCeEeccCCCCCeEecCCCCeEEeccc
Q 002250 714 EDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFD-RPVIHRDVKSSNILLDLEWKPRIADFG 792 (947)
Q Consensus 714 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~-~~ivH~Dlkp~NIll~~~~~~kl~DfG 792 (947)
++..++||||+++|+|.+++... ..+++..+..++.|++.||+||| + .+|+||||||+||+++.++.+||+|||
T Consensus 67 ~~~~~lv~E~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH---~~~~ivHrDikp~NIll~~~~~~kL~Dfg 141 (325)
T cd05594 67 HDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFG 141 (325)
T ss_pred CCEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hcCCEEecCCCCCeEEECCCCCEEEecCC
Confidence 99999999999999999988763 35889999999999999999999 6 799999999999999999999999999
Q ss_pred cceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcccccc
Q 002250 793 LAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDSRDS 872 (947)
Q Consensus 793 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 872 (947)
+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.... .............
T Consensus 142 ~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~-----~~~~~~~i~~~~~- 213 (325)
T cd05594 142 LCKEGIKDGA--TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-----HEKLFELILMEEI- 213 (325)
T ss_pred CCeecCCCCc--ccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCC-----HHHHHHHHhcCCC-
Confidence 9875432211 1223469999999999998899999999999999999999999985321 1111111111110
Q ss_pred ccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 002250 873 MLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRP-----SMRVVVQM 916 (947)
Q Consensus 873 ~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~ev~~~ 916 (947)
..+......+.+++.+|++.||++|+ ++.+++++
T Consensus 214 ----------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 214 ----------RFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred ----------CCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 11122345678899999999999996 89998864
No 147
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1.6e-35 Score=318.90 Aligned_cols=257 Identities=24% Similarity=0.321 Sum_probs=196.5
Q ss_pred cCCcccccccCceeEEEEEeCC-Cc--EEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 631 VKPENLIGKGGSGNVYKVVLNS-GK--ELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 631 ~~~~~~iG~G~~g~Vy~~~~~~-~~--~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
|.+.+.||+|+||.||+|+..+ ++ .||||.+.... ......+.+.+|+++++.++||||+++
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~---------------~~~~~~~~~~~E~~~l~~l~h~~iv~~ 65 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAI---------------CTRSEMEDFLSEAVCMKEFDHPNVMRL 65 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCc---------------CCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 3567889999999999999764 33 68999873211 111234678899999999999999999
Q ss_pred EEEEecC------CccEEEEeccCCCChHHHhhhc----CCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCC
Q 002250 708 YCSITSE------DSNLLVYEYLPNGSLWDRLHTC----HKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSN 777 (947)
Q Consensus 708 ~~~~~~~------~~~~lv~e~~~~gsL~~~l~~~----~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~N 777 (947)
++++... ...++||||+++|+|.+++... ....+++.....++.|++.|++||| +++|+||||||+|
T Consensus 66 ~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~N 142 (272)
T cd05075 66 IGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLS---SKSFIHRDLAARN 142 (272)
T ss_pred EEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhh
Confidence 9987432 2468999999999999987532 2345789999999999999999999 8999999999999
Q ss_pred eEecCCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCc
Q 002250 778 ILLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDS 856 (947)
Q Consensus 778 Ill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~ 856 (947)
|++++++.++|+|||+++...............+++.|+|||+.....++.++||||||+++|||++ |+.||... ..
T Consensus 143 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~--~~ 220 (272)
T cd05075 143 CMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGV--EN 220 (272)
T ss_pred eEEcCCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCC--CH
Confidence 9999999999999999986644332211223345778999999998889999999999999999999 78887432 11
Q ss_pred ccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 002250 857 KDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEA 920 (947)
Q Consensus 857 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 920 (947)
..+.+. ...... .......+..+.+++.+||+.+|++|||+.++++.|+++
T Consensus 221 ~~~~~~----~~~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 221 SEIYDY----LRQGNR---------LKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred HHHHHH----HHcCCC---------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 112111 111111 011123345688999999999999999999999999874
No 148
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=6e-39 Score=359.47 Aligned_cols=463 Identities=25% Similarity=0.364 Sum_probs=343.4
Q ss_pred eeEeccCCCccccccCcccccCCcccceeeccCccccCcCchhhhcCCCccEEeCcCccCcCCCCCcccccccceeecCC
Q 002250 38 VAEINLPEQQLLGVVPFDSICGLQALQKINLGTNFLYGTITEGLKSCTRLQVLDLGNNSFSGEVPDLSMLHELSFLNLNS 117 (947)
Q Consensus 38 v~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~l~~l~~L~~L~L~~ 117 (947)
++.++++.+-+.. .|.+.+.+.-.|+.|+|++|.+ +..|..+..+.+|+.|+++.|-|...+..++++++|++|+|.+
T Consensus 23 ~~~ln~~~N~~l~-~pl~~~~~~v~L~~l~lsnn~~-~~fp~~it~l~~L~~ln~s~n~i~~vp~s~~~~~~l~~lnL~~ 100 (1081)
T KOG0618|consen 23 LQILNLRRNSLLS-RPLEFVEKRVKLKSLDLSNNQI-SSFPIQITLLSHLRQLNLSRNYIRSVPSSCSNMRNLQYLNLKN 100 (1081)
T ss_pred HHhhhcccccccc-CchHHhhheeeeEEeecccccc-ccCCchhhhHHHHhhcccchhhHhhCchhhhhhhcchhheecc
Confidence 5555554433322 2233344444477777777777 6666677777777777777777776666677777777777777
Q ss_pred CCccCccCcccccccCCCceeeCCCCCCCCCCCChhhcccccCcEEEccCccccccCCccCCCCCCCCEEECcCcccccc
Q 002250 118 SGISGKFPWKSLENLTNLEFLSLGDNPFDPSPFPMEVLKLEKLYWLYLTNCSVTGQIPEGIGNLTQLQNLELSDNELFGE 197 (947)
Q Consensus 118 n~i~~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 197 (947)
|.+. ..| ..+..+.+|++||+|.|.+.. +|..+..++.++++..++|..... ++... .+.++|..|.+.+.
T Consensus 101 n~l~-~lP-~~~~~lknl~~LdlS~N~f~~--~Pl~i~~lt~~~~~~~s~N~~~~~----lg~~~-ik~~~l~~n~l~~~ 171 (1081)
T KOG0618|consen 101 NRLQ-SLP-ASISELKNLQYLDLSFNHFGP--IPLVIEVLTAEEELAASNNEKIQR----LGQTS-IKKLDLRLNVLGGS 171 (1081)
T ss_pred chhh-cCc-hhHHhhhcccccccchhccCC--CchhHHhhhHHHHHhhhcchhhhh----hcccc-chhhhhhhhhcccc
Confidence 7765 344 467777777777777777754 556666777777777777732212 22222 66777777777777
Q ss_pred cCccccCCCCCcEEEeecccccccCCccCCCCCCccEEeccCCCCCCCCccccccCCCCEEEccCccCcccCCCCccCCC
Q 002250 198 IPAGIVKLNKLWQLELYNNSLSGRLPVGFSNLTNLMNFDVSQNRLEGDLSELRFLNQLSSLHLFENQFSGEIPEEFGEFK 277 (947)
Q Consensus 198 ~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~ 277 (947)
++..+..+.. .|+|.+|.+. . ..+..+.+|+.|....|++..... ..++|+.|+.++|.+....+ .+. -.
T Consensus 172 ~~~~i~~l~~--~ldLr~N~~~-~--~dls~~~~l~~l~c~rn~ls~l~~---~g~~l~~L~a~~n~l~~~~~-~p~-p~ 241 (1081)
T KOG0618|consen 172 FLIDIYNLTH--QLDLRYNEME-V--LDLSNLANLEVLHCERNQLSELEI---SGPSLTALYADHNPLTTLDV-HPV-PL 241 (1081)
T ss_pred hhcchhhhhe--eeecccchhh-h--hhhhhccchhhhhhhhcccceEEe---cCcchheeeeccCcceeecc-ccc-cc
Confidence 6666666655 6777777776 2 345667777777777777754221 23567888888888873222 222 24
Q ss_pred cCcEEEccCccccccCCcCccCcccccccccccccccCCCCCCcccCCccceeeecccccCCcCCccccCCCCccEEEcc
Q 002250 278 HLTELSLYTNRLTGTLPQKLGSWADFNYVDVSENLLTGPIPPDMCKTGAMTDLLVLQNNFNGTVPETYANCKSLIRFRVN 357 (947)
Q Consensus 278 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~ 357 (947)
+|++++++.|+++ .+|++++.+.+|+.|+..+|.++ .+|..+....++..|....|.+. .+|....++++|+.|+|.
T Consensus 242 nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~ 318 (1081)
T KOG0618|consen 242 NLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQ 318 (1081)
T ss_pred cceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeeh
Confidence 6889999999998 67788899999999999999995 78888888888888888877776 566677888899999999
Q ss_pred cccccccCCCCCCC-CC-CcceeccccCCcCCCCCCcccccccccEEEccCccccccCCCCCCCCCcceEEEcccCcccC
Q 002250 358 NNSLSGTIPPGIWS-LP-NLSIIDLSTNQFEGPVTDDIGNAKSLALLLLANNRFSGELPSKISEASSLVSIQLSLNQFSG 435 (947)
Q Consensus 358 ~n~l~~~~p~~~~~-l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 435 (947)
.|.|. ..|+.+.. +. .|+.|..+.|++...+.-.=..+..|+.|++.+|.++...-+.+.+...|+.|+|++|+|..
T Consensus 319 ~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~ 397 (1081)
T KOG0618|consen 319 SNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNS 397 (1081)
T ss_pred hcccc-ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeeccccccc
Confidence 99998 55654433 22 37788888888876554334456789999999999998888889999999999999999995
Q ss_pred CCCcccccccccchhhccccccCCCCCcccccccccceeeccCceeeeecCCCCCccCcCcEEECCCCccCC-ccCCccc
Q 002250 436 QIPLDIGKLKKLSSLYLHDNMFSGPLPYSIGSCVSLTDINFAQNSLSGKIPDSLGSLPSLNSLNLSNNKFSG-EIPISLT 514 (947)
Q Consensus 436 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~ 514 (947)
.....+.++..|+.|+||+|+++ .+|.++..+..|+.|...+|++. ..| ++..++.|+.+|+|.|+|+. .+|....
T Consensus 398 fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p 474 (1081)
T KOG0618|consen 398 FPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALP 474 (1081)
T ss_pred CCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCC
Confidence 44456889999999999999999 68899999999999999999999 888 79999999999999999984 4555555
Q ss_pred ccccceeeCCCCcC
Q 002250 515 YPKLSLLDLSNNQL 528 (947)
Q Consensus 515 ~~~L~~L~ls~N~l 528 (947)
.++|++|||++|.-
T Consensus 475 ~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 475 SPNLKYLDLSGNTR 488 (1081)
T ss_pred CcccceeeccCCcc
Confidence 68999999999983
No 149
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=2.7e-35 Score=329.71 Aligned_cols=256 Identities=24% Similarity=0.315 Sum_probs=196.6
Q ss_pred hhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccce
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVK 706 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 706 (947)
.++|++.+.||+|+||.||+|+.. +++.||+|++... ..........+.+|+.+++.++||||++
T Consensus 42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~--------------~~~~~~~~~~~~~e~~i~~~~~hp~iv~ 107 (370)
T cd05621 42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKF--------------EMIKRSDSAFFWEERDIMAFANSPWVVQ 107 (370)
T ss_pred HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHH--------------HhhhhhhHHHHHHHHHHHHhCCCCCEee
Confidence 367999999999999999999966 6889999988311 0111223456789999999999999999
Q ss_pred EEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCe
Q 002250 707 LYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKP 786 (947)
Q Consensus 707 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 786 (947)
+++++..++..|+||||+++|+|.+++... .+++.....++.|++.||+||| +.+|+||||||+|||++.++.+
T Consensus 108 ~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH---~~~IvHrDLKp~NILl~~~~~~ 181 (370)
T cd05621 108 LFCAFQDDKYLYMVMEYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIH---SMGLIHRDVKPDNMLLDKHGHL 181 (370)
T ss_pred EEEEEEcCCEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCE
Confidence 999999999999999999999999999752 4788888899999999999999 8999999999999999999999
Q ss_pred EEeccccceecccCCCCcceecccccccccCccccccC----CCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHH
Q 002250 787 RIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTC----KINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNW 862 (947)
Q Consensus 787 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~ 862 (947)
||+|||+|......... ......||+.|+|||++... .++.++||||+||++|||++|+.||... +....
T Consensus 182 kL~DFG~a~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~-----~~~~~ 255 (370)
T cd05621 182 KLADFGTCMKMDETGMV-RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYAD-----SLVGT 255 (370)
T ss_pred EEEecccceecccCCce-ecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCC-----CHHHH
Confidence 99999999866433221 12245699999999998653 3778999999999999999999999532 11111
Q ss_pred HHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCC--CCCHHHHHHH
Q 002250 863 VYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAF--RPSMRVVVQM 916 (947)
Q Consensus 863 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPt~~ev~~~ 916 (947)
..........+ .+++ .......+.+++..|+..+|.+ ||++.|++++
T Consensus 256 ~~~i~~~~~~~------~~p~-~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 256 YSKIMDHKNSL------NFPE-DVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred HHHHHhCCccc------CCCC-cccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 11111111110 0111 1122345667777888765544 8899999876
No 150
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=2.6e-35 Score=318.23 Aligned_cols=249 Identities=23% Similarity=0.270 Sum_probs=194.3
Q ss_pred ccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEEEEecCC
Q 002250 637 IGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYCSITSED 715 (947)
Q Consensus 637 iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 715 (947)
||+|+||+||+|... +++.||||++.... .......+.+..|++++++++||||+++.+++..+.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~--------------~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~ 66 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKR--------------LKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKT 66 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHH--------------HhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCC
Confidence 699999999999965 78999999883211 011123356788999999999999999999999999
Q ss_pred ccEEEEeccCCCChHHHhhhc--CCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEecccc
Q 002250 716 SNLLVYEYLPNGSLWDRLHTC--HKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFGL 793 (947)
Q Consensus 716 ~~~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 793 (947)
..++||||+++|+|.+++... ....+++..+..++.|++.||+||| +.+|+||||||+||+++.++.++|+|||+
T Consensus 67 ~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~ 143 (280)
T cd05608 67 DLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLH---QRRIIYRDLKPENVLLDNDGNVRISDLGL 143 (280)
T ss_pred eEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCcc
Confidence 999999999999999887543 2346899999999999999999999 89999999999999999999999999999
Q ss_pred ceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhccccccc
Q 002250 794 AKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDSRDSM 873 (947)
Q Consensus 794 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 873 (947)
+......... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..........
T Consensus 144 ~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~------ 214 (280)
T cd05608 144 AVELKDGQSK--TKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKELKQRIL------ 214 (280)
T ss_pred ceecCCCCcc--ccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcch-hHHHHHHhhc------
Confidence 9765443221 223468999999999999999999999999999999999999985432111 0111111110
Q ss_pred cccccCCCCccCHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 002250 874 LTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRP-----SMRVVVQM 916 (947)
Q Consensus 874 ~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~ev~~~ 916 (947)
.. ....+...+..+.+++.+|++.||++|| ++.+++++
T Consensus 215 ----~~-~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 215 ----ND-SVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred ----cc-CCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 00 0112233456688999999999999999 66677653
No 151
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=2.3e-35 Score=325.17 Aligned_cols=245 Identities=24% Similarity=0.294 Sum_probs=192.8
Q ss_pred ccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-cccccceEEEEEe
Q 002250 635 NLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-RHVNVVKLYCSIT 712 (947)
Q Consensus 635 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 712 (947)
+.||+|+||.||+|+.. +++.||||++.... .........+..|.+++..+ +||||+++++++.
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~--------------~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~ 66 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDV--------------ILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQ 66 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHH--------------hhhhhHHHHHHHHHHHHHhccCCCCccceeeEEE
Confidence 46899999999999965 58899999984211 11123345677888998866 7999999999999
Q ss_pred cCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEeccc
Q 002250 713 SEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFG 792 (947)
Q Consensus 713 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 792 (947)
.++..|+||||+++|+|.+++... ..+++.....++.|++.||+||| +.+|+||||||+||+++.++.+||+|||
T Consensus 67 ~~~~~~lv~E~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~Nill~~~~~~kL~Dfg 141 (321)
T cd05591 67 TKDRLFFVMEYVNGGDLMFQIQRS--RKFDEPRSRFYAAEVTLALMFLH---RHGVIYRDLKLDNILLDAEGHCKLADFG 141 (321)
T ss_pred cCCeEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeecc
Confidence 999999999999999999998764 35788889999999999999999 8999999999999999999999999999
Q ss_pred cceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcccccc
Q 002250 793 LAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDSRDS 872 (947)
Q Consensus 793 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 872 (947)
++........ ......||+.|+|||++.+..++.++||||+||++|||++|+.||.... ..............
T Consensus 142 ~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~-----~~~~~~~i~~~~~~ 214 (321)
T cd05591 142 MCKEGILNGV--TTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADN-----EDDLFESILHDDVL 214 (321)
T ss_pred cceecccCCc--cccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCC-----HHHHHHHHHcCCCC
Confidence 9875432221 1224568999999999998889999999999999999999999995321 11221111111111
Q ss_pred ccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCC-------CHHHHHHH
Q 002250 873 MLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRP-------SMRVVVQM 916 (947)
Q Consensus 873 ~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-------t~~ev~~~ 916 (947)
.+......+.+++.+|++.||++|| ++.+++++
T Consensus 215 -----------~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 215 -----------YPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred -----------CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 1111234678899999999999999 77777654
No 152
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-36 Score=325.74 Aligned_cols=244 Identities=27% Similarity=0.397 Sum_probs=200.8
Q ss_pred cccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEEEEecC
Q 002250 636 LIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYCSITSE 714 (947)
Q Consensus 636 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 714 (947)
.+|+|.||+||-|+.. +...+|||.+. .+.....+.+..||...+.++|.|||+++|.+.++
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIp-----------------ekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~sen 644 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIP-----------------EKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSEN 644 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecc-----------------cccchhhccHHHHHHHHHHHhhHhHHHHhhccCCC
Confidence 5899999999999965 56678999873 23345667899999999999999999999999999
Q ss_pred CccEEEEeccCCCChHHHhhhc-CCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEec-CCCCeEEeccc
Q 002250 715 DSNLLVYEYLPNGSLWDRLHTC-HKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLD-LEWKPRIADFG 792 (947)
Q Consensus 715 ~~~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~DfG 792 (947)
+..-|.||-+|||+|.+.++.. ++..-.+..+--...||++||.||| ++.|||||||-+|||++ -.|.+||+|||
T Consensus 645 Gf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLH---en~IVHRDIKGDNVLvNTySGvlKISDFG 721 (1226)
T KOG4279|consen 645 GFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLH---ENKIVHRDIKGDNVLVNTYSGVLKISDFG 721 (1226)
T ss_pred CeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhh---hcceeeccccCCcEEEeeccceEEecccc
Confidence 9889999999999999999864 4444477777778899999999999 89999999999999997 57899999999
Q ss_pred cceecccCCCCcceecccccccccCccccccCC--CCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcccc
Q 002250 793 LAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCK--INEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDSR 870 (947)
Q Consensus 793 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 870 (947)
.++....- ...+..+.||..|||||++..+. |+.++|||||||++.||.||++||........
T Consensus 722 TsKRLAgi--nP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA------------- 786 (1226)
T KOG4279|consen 722 TSKRLAGI--NPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA------------- 786 (1226)
T ss_pred cchhhccC--CccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhH-------------
Confidence 99866432 33444678999999999997664 88899999999999999999999943221111
Q ss_pred ccccccc-cCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 871 DSMLTVV-DPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 871 ~~~~~~~-d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
.|..+. -..-++++++..++...++.+|+..||.+||+++++++
T Consensus 787 -AMFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 787 -AMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred -hhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 111111 11226778888899999999999999999999999984
No 153
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=6.6e-36 Score=329.17 Aligned_cols=240 Identities=25% Similarity=0.324 Sum_probs=191.4
Q ss_pred ccccccCceeEEEEEe----CCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEEE
Q 002250 635 NLIGKGGSGNVYKVVL----NSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYCS 710 (947)
Q Consensus 635 ~~iG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 710 (947)
+.||+|+||.||+++. .+|+.||+|++... .........+..|++++++++||||++++++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~---------------~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~ 66 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKA---------------TLKVRDRVRTKMERDILAEVNHPFIVKLHYA 66 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHH---------------HhhhhhHHHHHHHHHHHHhCCCCCcccEEEE
Confidence 5799999999999874 35889999998321 1111234557789999999999999999999
Q ss_pred EecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEec
Q 002250 711 ITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIAD 790 (947)
Q Consensus 711 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 790 (947)
+..++..|+||||+++|+|.+++.+. ..+++.....++.|++.||+||| +.+|+||||||+||+++.++.+||+|
T Consensus 67 ~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kL~D 141 (318)
T cd05582 67 FQTEGKLYLILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTD 141 (318)
T ss_pred EEcCCEEEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHeEECCCCcEEEee
Confidence 99999999999999999999999763 45899999999999999999999 89999999999999999999999999
Q ss_pred cccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcccc
Q 002250 791 FGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDSR 870 (947)
Q Consensus 791 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 870 (947)
||+++....... ......||+.|+|||++....++.++|||||||++|||++|+.||... +............
T Consensus 142 fg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~-----~~~~~~~~i~~~~ 214 (318)
T cd05582 142 FGLSKESIDHEK--KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGK-----DRKETMTMILKAK 214 (318)
T ss_pred ccCCcccCCCCC--ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCC-----CHHHHHHHHHcCC
Confidence 999976543321 222457899999999998888999999999999999999999998532 1111111111111
Q ss_pred ccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHH
Q 002250 871 DSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRV 912 (947)
Q Consensus 871 ~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~e 912 (947)
. ..+......+.+++.+|++.||++||++.+
T Consensus 215 ~-----------~~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 215 L-----------GMPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred C-----------CCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 1 112223456788999999999999999655
No 154
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=3.3e-35 Score=329.54 Aligned_cols=256 Identities=22% Similarity=0.278 Sum_probs=198.7
Q ss_pred hhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccce
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVK 706 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 706 (947)
.++|++.+.||+|+||.||+|+.. +++.||||++.... .........+.+|+.+++.++||||++
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~--------------~~~~~~~~~~~~e~~il~~~~h~~iv~ 107 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFE--------------MIKRSDSAFFWEERDIMAHANSEWIVQ 107 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHH--------------hhhhhhHHHHHHHHHHHHhCCCCCcce
Confidence 467889999999999999999965 68899999983110 011123455788999999999999999
Q ss_pred EEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCe
Q 002250 707 LYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKP 786 (947)
Q Consensus 707 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 786 (947)
+++++.++...|+||||+++|+|.+++... .++......++.|++.||+||| +.+|+||||||+|||++.++.+
T Consensus 108 ~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~ 181 (370)
T cd05596 108 LHYAFQDDKYLYMVMEYMPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHL 181 (370)
T ss_pred EEEEEecCCEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEcCCCCE
Confidence 999999999999999999999999998752 4677778888999999999999 8999999999999999999999
Q ss_pred EEeccccceecccCCCCcceecccccccccCccccccC----CCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHH
Q 002250 787 RIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTC----KINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNW 862 (947)
Q Consensus 787 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~ 862 (947)
||+|||++......... ......||+.|+|||++... .++.++|||||||++|||++|+.||... +....
T Consensus 182 kL~DfG~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~-----~~~~~ 255 (370)
T cd05596 182 KLADFGTCMKMDANGMV-RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD-----SLVGT 255 (370)
T ss_pred EEEeccceeeccCCCcc-cCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCC-----CHHHH
Confidence 99999999865433211 12245699999999998653 3788999999999999999999999532 11211
Q ss_pred HHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCC--CCCHHHHHHH
Q 002250 863 VYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAF--RPSMRVVVQM 916 (947)
Q Consensus 863 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPt~~ev~~~ 916 (947)
.......... ...+. .......+.+++.+|++.+|.+ ||++.|++++
T Consensus 256 ~~~i~~~~~~------~~~~~-~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 256 YSKIMDHKNS------LTFPD-DIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred HHHHHcCCCc------CCCCC-cCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 1111111111 00111 1123456778899999999988 9999999765
No 155
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=3e-35 Score=312.56 Aligned_cols=248 Identities=24% Similarity=0.319 Sum_probs=196.4
Q ss_pred ccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEEEEecC
Q 002250 635 NLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYCSITSE 714 (947)
Q Consensus 635 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 714 (947)
+.||+|+||.||+|...+++.+|+|.+.... .......+.+|++++++++||||+++++++...
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~----------------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 64 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDL----------------PQELKIKFLSEARILKQYDHPNIVKLIGVCTQR 64 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcC----------------CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecC
Confidence 4689999999999998889999999874211 011234688999999999999999999999999
Q ss_pred CccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEeccccc
Q 002250 715 DSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFGLA 794 (947)
Q Consensus 715 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a 794 (947)
+..++||||+++++|.+++.... ..+++..+..++.|++.|+.|+| +.+++||||||+||+++.++.++++|||++
T Consensus 65 ~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~ 140 (250)
T cd05085 65 QPIYIVMELVPGGDFLSFLRKKK-DELKTKQLVKFALDAAAGMAYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMS 140 (250)
T ss_pred CccEEEEECCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccChheEEEcCCCeEEECCCccc
Confidence 99999999999999999987633 45789999999999999999999 899999999999999999999999999999
Q ss_pred eecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhccccccc
Q 002250 795 KIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNWVYSKMDSRDSM 873 (947)
Q Consensus 795 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 873 (947)
......... ......++..|+|||+...+.++.++||||||+++||+++ |..||.... ..... ........
T Consensus 141 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~-----~~~~~-~~~~~~~~- 212 (250)
T cd05085 141 RQEDDGIYS-SSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMT-----NQQAR-EQVEKGYR- 212 (250)
T ss_pred eeccccccc-cCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCC-----HHHHH-HHHHcCCC-
Confidence 754332211 1112234678999999998889999999999999999999 888984321 11111 11111110
Q ss_pred cccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 002250 874 LTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLE 918 (947)
Q Consensus 874 ~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~ 918 (947)
.......+..+.+++.+|++.+|++||++.|++++|+
T Consensus 213 --------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 213 --------MSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred --------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 0111223467889999999999999999999999886
No 156
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=1.2e-35 Score=330.44 Aligned_cols=261 Identities=24% Similarity=0.327 Sum_probs=199.6
Q ss_pred hccCCcccccccCceeEEEEEe------CCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-cc
Q 002250 629 DAVKPENLIGKGGSGNVYKVVL------NSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-RH 701 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h 701 (947)
++|++.+.||+|+||+||+|.. .+++.||||++.... .......+.+|+.++.++ +|
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~----------------~~~~~~~~~~E~~~l~~l~~h 70 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA----------------THSEHRALMSELKILIHIGHH 70 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC----------------ChHHHHHHHHHHHHHHhccCC
Confidence 6899999999999999999973 347889999984211 112235678899999999 68
Q ss_pred cccceEEEEEecC-CccEEEEeccCCCChHHHhhhcC-------------------------------------------
Q 002250 702 VNVVKLYCSITSE-DSNLLVYEYLPNGSLWDRLHTCH------------------------------------------- 737 (947)
Q Consensus 702 ~niv~l~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~------------------------------------------- 737 (947)
|||+++++++... ...++||||+++|+|.+++....
T Consensus 71 ~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (343)
T cd05103 71 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASS 150 (343)
T ss_pred ccHhhhcceeecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccc
Confidence 9999999988654 45789999999999999986531
Q ss_pred ----------------------CccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEeccccce
Q 002250 738 ----------------------KIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFGLAK 795 (947)
Q Consensus 738 ----------------------~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 795 (947)
...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~ 227 (343)
T cd05103 151 GFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLAR 227 (343)
T ss_pred cccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCccCeEEEcCCCcEEEEeccccc
Confidence 123678888999999999999999 8999999999999999999999999999997
Q ss_pred ecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhcccccccc
Q 002250 796 IVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNWVYSKMDSRDSML 874 (947)
Q Consensus 796 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 874 (947)
...............++..|+|||++.+..++.++||||||+++|||++ |..||..... ...+... ......
T Consensus 228 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-~~~~~~~----~~~~~~-- 300 (343)
T cd05103 228 DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI-DEEFCRR----LKEGTR-- 300 (343)
T ss_pred ccccCcchhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccc-cHHHHHH----HhccCC--
Confidence 6533322112222345678999999988889999999999999999997 8888843211 1111111 111110
Q ss_pred ccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCC
Q 002250 875 TVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAEP 922 (947)
Q Consensus 875 ~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 922 (947)
...+ ......+.+++.+||+.+|++|||+.|++++|+.+..
T Consensus 301 ----~~~~---~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 301 ----MRAP---DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred ----CCCC---CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 0111 1123468899999999999999999999999987643
No 157
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=2.4e-35 Score=323.98 Aligned_cols=243 Identities=26% Similarity=0.354 Sum_probs=189.6
Q ss_pred ccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-cccccceEEEEEe
Q 002250 635 NLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-RHVNVVKLYCSIT 712 (947)
Q Consensus 635 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 712 (947)
+.||+|+||.||+|+.+ +|+.||||++.... .........+..|..++... +||||+++++++.
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~--------------~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~ 66 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDV--------------VLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQ 66 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHH--------------hhhcchHHHHHHHHHHHHhccCCCCccCeeEEEE
Confidence 46899999999999966 68899999984211 01112345566788888754 8999999999999
Q ss_pred cCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEeccc
Q 002250 713 SEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFG 792 (947)
Q Consensus 713 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 792 (947)
.++..|+||||+++|+|.+++... ..+++.....++.|++.||+||| +.+|+||||||+||+++.++.++|+|||
T Consensus 67 ~~~~~~lv~E~~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nil~~~~~~~kl~Dfg 141 (316)
T cd05620 67 TKEHLFFVMEFLNGGDLMFHIQDK--GRFDLYRATFYAAEIVCGLQFLH---SKGIIYRDLKLDNVMLDRDGHIKIADFG 141 (316)
T ss_pred eCCEEEEEECCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEeCccC
Confidence 999999999999999999998763 35788888899999999999999 8999999999999999999999999999
Q ss_pred cceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcccccc
Q 002250 793 LAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDSRDS 872 (947)
Q Consensus 793 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 872 (947)
+++...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.... .....+ ......
T Consensus 142 ~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~--~~~~~~---~~~~~~-- 212 (316)
T cd05620 142 MCKENVFGD--NRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDD--EDELFE---SIRVDT-- 212 (316)
T ss_pred CCeecccCC--CceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC--HHHHHH---HHHhCC--
Confidence 987432221 12234578999999999999899999999999999999999999995321 111111 111111
Q ss_pred ccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHH-HHH
Q 002250 873 MLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMR-VVV 914 (947)
Q Consensus 873 ~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~-ev~ 914 (947)
+.++ ......+.+++.+|++.||++||++. ++.
T Consensus 213 ------~~~~---~~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 213 ------PHYP---RWITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred ------CCCC---CCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 1111 12334577899999999999999985 454
No 158
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=2.2e-35 Score=326.02 Aligned_cols=248 Identities=23% Similarity=0.258 Sum_probs=189.2
Q ss_pred ccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHH-HHHhhccccccceEEEEEe
Q 002250 635 NLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEV-ATLSAVRHVNVVKLYCSIT 712 (947)
Q Consensus 635 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~-~~l~~l~h~niv~l~~~~~ 712 (947)
+.||+|+||+||+|+.. +++.||+|++.... .........+..|. .+++.++||||+++++++.
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~--------------~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~ 66 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKA--------------ILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQ 66 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHH--------------HHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEE
Confidence 36899999999999965 67889999983110 00112223344444 4567889999999999999
Q ss_pred cCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEeccc
Q 002250 713 SEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFG 792 (947)
Q Consensus 713 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 792 (947)
.++..|+||||+++|+|.+++... ..+.......++.|++.||+||| +.+|+||||||+||+++.++.+||+|||
T Consensus 67 ~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH---~~giiHrDlkp~Nili~~~~~~kl~DfG 141 (325)
T cd05602 67 TADKLYFVLDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFG 141 (325)
T ss_pred cCCeEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEEccCC
Confidence 999999999999999999999863 34677778889999999999999 8999999999999999999999999999
Q ss_pred cceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcccccc
Q 002250 793 LAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDSRDS 872 (947)
Q Consensus 793 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 872 (947)
+++....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||... +..+..........
T Consensus 142 ~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~-----~~~~~~~~i~~~~~- 213 (325)
T cd05602 142 LCKENIEHNG--TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR-----NTAEMYDNILNKPL- 213 (325)
T ss_pred CCcccccCCC--CcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCC-----CHHHHHHHHHhCCc-
Confidence 9975432211 223456999999999999989999999999999999999999999532 11122111111110
Q ss_pred ccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhc
Q 002250 873 MLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEE 919 (947)
Q Consensus 873 ~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~ 919 (947)
.........+.+++.+|++.||.+||++.+.+..+.+
T Consensus 214 ----------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~ 250 (325)
T cd05602 214 ----------QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKN 250 (325)
T ss_pred ----------CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhc
Confidence 1112234567888999999999999998765544443
No 159
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=2.5e-35 Score=325.82 Aligned_cols=250 Identities=22% Similarity=0.301 Sum_probs=194.6
Q ss_pred ccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-cccccceEEEEEe
Q 002250 635 NLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-RHVNVVKLYCSIT 712 (947)
Q Consensus 635 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 712 (947)
+.||+|+||.||+|+.. +++.||||++.... .........+.+|+.++.++ +||||+++++++.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~--------------~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~ 66 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKEL--------------VNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQ 66 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHH--------------hhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEE
Confidence 46899999999999965 68899999984211 11122345678899999998 7999999999999
Q ss_pred cCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEeccc
Q 002250 713 SEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFG 792 (947)
Q Consensus 713 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 792 (947)
.++..|+||||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||
T Consensus 67 ~~~~~~lv~e~~~~g~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg 141 (329)
T cd05588 67 TESRLFFVIEFVSGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYG 141 (329)
T ss_pred cCCEEEEEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEECcCc
Confidence 999999999999999999988763 45899999999999999999999 8999999999999999999999999999
Q ss_pred cceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCC---CcccHHHHHHhhccc
Q 002250 793 LAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFG---DSKDIVNWVYSKMDS 869 (947)
Q Consensus 793 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~---~~~~~~~~~~~~~~~ 869 (947)
+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......++.......
T Consensus 142 ~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 219 (329)
T cd05588 142 MCKEGIRPG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILE 219 (329)
T ss_pred cccccccCC--CccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHc
Confidence 987432211 122345789999999999998999999999999999999999999953211 111122222222211
Q ss_pred cccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCC------HHHHHH
Q 002250 870 RDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPS------MRVVVQ 915 (947)
Q Consensus 870 ~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt------~~ev~~ 915 (947)
.. ...+......+.+++.+|++.||.+||+ +.++++
T Consensus 220 ~~----------~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 220 KQ----------IRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred CC----------CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 11 1112223456788999999999999997 567664
No 160
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=3.2e-35 Score=323.46 Aligned_cols=245 Identities=25% Similarity=0.299 Sum_probs=194.1
Q ss_pred ccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-cccccceEEEEEe
Q 002250 635 NLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-RHVNVVKLYCSIT 712 (947)
Q Consensus 635 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 712 (947)
+.||+|+||+||+|+.+ +++.||||++.... .........+.+|+++++.+ +||||+++++++.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~--------------~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~ 66 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDV--------------ILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQ 66 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHH--------------HhhhhHHHHHHHHHHHHHhccCCCCccceeeEEE
Confidence 46899999999999966 58899999984211 11123345677899999888 6999999999999
Q ss_pred cCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEeccc
Q 002250 713 SEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFG 792 (947)
Q Consensus 713 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 792 (947)
..+..++||||+++|+|.+++... ..+++.....++.|++.||+||| +.+|+||||||+||++++++.+||+|||
T Consensus 67 ~~~~~~lv~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg 141 (318)
T cd05570 67 TKDRLFFVMEYVNGGDLMFHIQRS--GRFDEPRARFYAAEIVLGLQFLH---ERGIIYRDLKLDNVLLDSEGHIKIADFG 141 (318)
T ss_pred cCCEEEEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeEccCCCHHHeEECCCCcEEecccC
Confidence 999999999999999999998764 35889999999999999999999 8999999999999999999999999999
Q ss_pred cceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcccccc
Q 002250 793 LAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDSRDS 872 (947)
Q Consensus 793 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 872 (947)
+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.... .............
T Consensus 142 ~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~-----~~~~~~~i~~~~~- 213 (318)
T cd05570 142 MCKEGILGGV--TTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDD-----EDELFQSILEDEV- 213 (318)
T ss_pred CCeecCcCCC--cccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCC-----HHHHHHHHHcCCC-
Confidence 9875322221 1223468999999999999999999999999999999999999985321 1111111111111
Q ss_pred ccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCH-----HHHHHH
Q 002250 873 MLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSM-----RVVVQM 916 (947)
Q Consensus 873 ~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~-----~ev~~~ 916 (947)
..+......+.+++.+|++.||++||++ .+++++
T Consensus 214 ----------~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 214 ----------RYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred ----------CCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 1112234567899999999999999999 777653
No 161
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1.4e-35 Score=321.37 Aligned_cols=262 Identities=26% Similarity=0.369 Sum_probs=201.7
Q ss_pred hccCCcccccccCceeEEEEEe-----CCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccc
Q 002250 629 DAVKPENLIGKGGSGNVYKVVL-----NSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVN 703 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n 703 (947)
+-|++.+.||+|+||.||+|+. .++..||+|.+.+.. .......+.+|++++++++|||
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~----------------~~~~~~~~~~e~~~l~~l~h~~ 67 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES----------------GGNHIADLKKEIEILRNLYHEN 67 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc----------------cHHHHHHHHHHHHHHHhCCCCC
Confidence 3467889999999999999974 357889999884221 1123457889999999999999
Q ss_pred cceEEEEEecC--CccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEec
Q 002250 704 VVKLYCSITSE--DSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLD 781 (947)
Q Consensus 704 iv~l~~~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~ 781 (947)
|+++++++... ...++||||+++++|.+++.+.. ..+++..+..++.|++.||+||| +.+++||||||+||+++
T Consensus 68 i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~~i~~aL~~lH---~~gi~H~dlkp~Nil~~ 143 (284)
T cd05079 68 IVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNK-NKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVE 143 (284)
T ss_pred eeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccchheEEEc
Confidence 99999998875 56789999999999999997632 35899999999999999999999 89999999999999999
Q ss_pred CCCCeEEeccccceecccCCCC-cceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCC-----
Q 002250 782 LEWKPRIADFGLAKIVQTGEAG-DLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGD----- 855 (947)
Q Consensus 782 ~~~~~kl~DfG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~----- 855 (947)
.++.++|+|||+++........ .......++..|+|||++.+..++.++||||||+++|||++++.|+......
T Consensus 144 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~ 223 (284)
T cd05079 144 SEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMI 223 (284)
T ss_pred CCCCEEECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhc
Confidence 9999999999999865433221 1112344677899999998888999999999999999999988775332110
Q ss_pred -----cccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 002250 856 -----SKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEA 920 (947)
Q Consensus 856 -----~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 920 (947)
.......... .. +....+.....+..+.+++.+|++.+|++|||+.++++.++++
T Consensus 224 ~~~~~~~~~~~~~~~-~~---------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 224 GPTHGQMTVTRLVRV-LE---------EGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred ccccccccHHHHHHH-HH---------cCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 0001111100 00 0111112223456789999999999999999999999999875
No 162
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=4.8e-35 Score=330.32 Aligned_cols=256 Identities=23% Similarity=0.310 Sum_probs=193.4
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
.|+..+.||+|+||+||+|+.. +++.||||++.... .........+.+|+.++++++||||++++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~--------------~~~~~~~~~~~~E~~il~~l~h~~iv~l~ 67 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKD--------------VLNRNQVAHVKAERDILAEADNEWVVKLY 67 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHH--------------hhhhHHHHHHHHHHHHHHhcCCCCeeeeE
Confidence 4778899999999999999954 68899999983210 01112345788999999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRI 788 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 788 (947)
+++.+++..|+||||+++|+|.+++... ..+++.....++.|++.||+||| +.+|+||||||+||+++.++.+||
T Consensus 68 ~~~~~~~~~~lv~E~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~aL~~LH---~~givHrDlKp~Nili~~~~~~kL 142 (381)
T cd05626 68 YSFQDKDNLYFVMDYIPGGDMMSLLIRM--EVFPEVLARFYIAELTLAIESVH---KMGFIHRDIKPDNILIDLDGHIKL 142 (381)
T ss_pred EEEecCCEEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCcHHHEEECCCCCEEE
Confidence 9999999999999999999999999864 34788888889999999999999 899999999999999999999999
Q ss_pred eccccceecccCCC---------------------------------------------CcceecccccccccCcccccc
Q 002250 789 ADFGLAKIVQTGEA---------------------------------------------GDLTHVIAGTHGYIAPEYAYT 823 (947)
Q Consensus 789 ~DfG~a~~~~~~~~---------------------------------------------~~~~~~~~gt~~y~aPE~~~~ 823 (947)
+|||+++....... .......+||+.|+|||++.+
T Consensus 143 ~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~ 222 (381)
T cd05626 143 TDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLR 222 (381)
T ss_pred eeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcC
Confidence 99999753311000 000123469999999999988
Q ss_pred CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHh--ccC
Q 002250 824 CKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIH--CTN 901 (947)
Q Consensus 824 ~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~--cl~ 901 (947)
..++.++|||||||++|||++|+.||..... ............. ...+. ......++.+++.+ |+.
T Consensus 223 ~~~~~~~DiwSlG~il~elltG~~Pf~~~~~-----~~~~~~i~~~~~~------~~~~~-~~~~s~~~~dli~~ll~~~ 290 (381)
T cd05626 223 KGYTQLCDWWSVGVILFEMLVGQPPFLAPTP-----TETQLKVINWENT------LHIPP-QVKLSPEAVDLITKLCCSA 290 (381)
T ss_pred CCCCCccceeehhhHHHHHHhCCCCCcCCCH-----HHHHHHHHccccc------cCCCC-CCCCCHHHHHHHHHHccCc
Confidence 8899999999999999999999999954321 1111111111100 00111 00122345566655 666
Q ss_pred CCCCCCCCHHHHHHH
Q 002250 902 KLPAFRPSMRVVVQM 916 (947)
Q Consensus 902 ~dP~~RPt~~ev~~~ 916 (947)
.+|..||++.|++++
T Consensus 291 ~~~~~R~~~~~~l~h 305 (381)
T cd05626 291 EERLGRNGADDIKAH 305 (381)
T ss_pred ccccCCCCHHHHhcC
Confidence 677779999999875
No 163
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=3.3e-35 Score=313.19 Aligned_cols=251 Identities=25% Similarity=0.347 Sum_probs=202.7
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
+|++.+.||+|+||.||++... +++.+|+|.+... ......+.+.+|+.+++.++||||++++
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~----------------~~~~~~~~~~~e~~~l~~l~h~~i~~~~ 64 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLP----------------KSSSAVEDSRKEAVLLAKMKHPNIVAFK 64 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcC----------------cchHHHHHHHHHHHHHHhCCCCCcceEE
Confidence 4677899999999999999965 6899999987311 1112346778899999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRI 788 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 788 (947)
+.+..++..++||||+++++|.+++.......+++.....++.|++.||+||| +.+|+|+||||+||++++++.+++
T Consensus 65 ~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dl~p~nili~~~~~~~l 141 (255)
T cd08219 65 ESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIH---EKRVLHRDIKSKNIFLTQNGKVKL 141 (255)
T ss_pred EEEEECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEECCCCcEEE
Confidence 99999999999999999999999987655566889999999999999999999 899999999999999999999999
Q ss_pred eccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcc
Q 002250 789 ADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMD 868 (947)
Q Consensus 789 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 868 (947)
+|||.++....... ......|++.|+|||+..+..++.++|+||||+++|+|++|+.||... +..........
T Consensus 142 ~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~-----~~~~~~~~~~~ 214 (255)
T cd08219 142 GDFGSARLLTSPGA--YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQAN-----SWKNLILKVCQ 214 (255)
T ss_pred cccCcceeeccccc--ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCC-----CHHHHHHHHhc
Confidence 99999976643322 122346889999999998888999999999999999999999998532 22222211111
Q ss_pred ccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 869 SRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 869 ~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
.. ....+......+.+++.+||+.||++|||+.+++..
T Consensus 215 ~~----------~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 215 GS----------YKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred CC----------CCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 11 111222334567889999999999999999999864
No 164
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=4.8e-35 Score=319.15 Aligned_cols=264 Identities=20% Similarity=0.308 Sum_probs=200.1
Q ss_pred hccCCcccccccCceeEEEEEeC-----------------CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHH
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-----------------SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDA 691 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-----------------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (947)
++|++.+.||+|+||.||+|... ++..||+|++.... .......+.+
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~----------------~~~~~~~~~~ 68 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA----------------NKNARNDFLK 68 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC----------------CHHHHHHHHH
Confidence 56899999999999999998643 23468888873210 1123457889
Q ss_pred HHHHHhhccccccceEEEEEecCCccEEEEeccCCCChHHHhhhcCC---------ccCCHHHHHHHHHHHHHHHHHHhc
Q 002250 692 EVATLSAVRHVNVVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHK---------IEMDWVVRYAIAVGAAKGLEYLHH 762 (947)
Q Consensus 692 E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~---------~~~~~~~~~~i~~~ia~~l~yLH~ 762 (947)
|+.+++.++|+||+++++++..++..++||||+++++|.+++..... ..+++.....++.|++.|++|||
T Consensus 69 E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH- 147 (296)
T cd05095 69 EIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLS- 147 (296)
T ss_pred HHHHHHhCCCCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHH-
Confidence 99999999999999999999999999999999999999999976422 24678889999999999999999
Q ss_pred CCCCCeEeccCCCCCeEecCCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHH
Q 002250 763 GFDRPVIHRDVKSSNILLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMEL 842 (947)
Q Consensus 763 ~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~el 842 (947)
+.+++||||||+||+++.++.++|+|||+++...............++..|+|||+...+.++.++|||||||++|||
T Consensus 148 --~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el 225 (296)
T cd05095 148 --SLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEI 225 (296)
T ss_pred --HCCeecccCChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHH
Confidence 889999999999999999999999999999765443322222223346789999998888899999999999999999
Q ss_pred Hh--CCCCCCCCCCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhc
Q 002250 843 VT--GKRPIVPEFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEE 919 (947)
Q Consensus 843 lt--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~ 919 (947)
++ |..||.... ................ ... ..+.+..++..+.+++.+||+.||++||++.+|++.|++
T Consensus 226 ~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 226 LTLCKEQPYSQLS--DEQVIENTGEFFRDQG--RQV----YLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred HHhCCCCCccccC--hHHHHHHHHHHHhhcc--ccc----cCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 98 667774321 1111111111000000 000 011112234678899999999999999999999999874
No 165
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=2.6e-35 Score=314.30 Aligned_cols=249 Identities=24% Similarity=0.300 Sum_probs=194.5
Q ss_pred cccccCceeEEEEEeC---CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEEEEe
Q 002250 636 LIGKGGSGNVYKVVLN---SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYCSIT 712 (947)
Q Consensus 636 ~iG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 712 (947)
.||+|+||.||+|.++ +++.+|+|++.... ......+++.+|+.++++++||||+++++++.
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~---------------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 66 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN---------------NDPALKDELLREANVMQQLDNPYIVRMIGICE 66 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCC---------------CcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc
Confidence 5899999999999743 57889999873211 01123467889999999999999999999886
Q ss_pred cCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEeccc
Q 002250 713 SEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFG 792 (947)
Q Consensus 713 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 792 (947)
.+..++||||+++|+|.+++... ..+++.....++.|++.|++||| +++|+||||||+||++++++.+||+|||
T Consensus 67 -~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~nill~~~~~~kl~Dfg 140 (257)
T cd05116 67 -AESWMLVMELAELGPLNKFLQKN--KHVTEKNITELVHQVSMGMKYLE---ETNFVHRDLAARNVLLVTQHYAKISDFG 140 (257)
T ss_pred -CCCcEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchhhEEEcCCCeEEECCCc
Confidence 45678999999999999999763 35889999999999999999999 8999999999999999999999999999
Q ss_pred cceecccCCCCc-ceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhcccc
Q 002250 793 LAKIVQTGEAGD-LTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNWVYSKMDSR 870 (947)
Q Consensus 793 ~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 870 (947)
+++......... ......++..|+|||.+....++.++||||||+++|||++ |+.||.... ...+.... ...
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--~~~~~~~i----~~~ 214 (257)
T cd05116 141 LSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMK--GNEVTQMI----ESG 214 (257)
T ss_pred cccccCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHH----HCC
Confidence 997654332211 1112234578999999988889999999999999999998 999985321 11222221 111
Q ss_pred ccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 002250 871 DSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEA 920 (947)
Q Consensus 871 ~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 920 (947)
.. .+.+...+..+.+++.+||+.||++||++.+|++.|++.
T Consensus 215 ~~---------~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 215 ER---------MECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred CC---------CCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 10 112223456688999999999999999999999999864
No 166
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1.6e-35 Score=328.03 Aligned_cols=256 Identities=22% Similarity=0.254 Sum_probs=199.8
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
++|++.+.||+|+||+||+|+.. +++.||||++.... .........+.+|+.+++.++||||+++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~--------------~~~~~~~~~~~~e~~i~~~~~~~~i~~~ 66 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSV--------------LLAQETVSFFEEERDILSISNSPWIPQL 66 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHH--------------hhhhhHHHHHHHHHHHHHhCCCCCCcce
Confidence 36888999999999999999965 78999999984211 1112344668899999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
++++.+++..++||||+++|+|.+++... ...+++.....++.|++.||+||| +.+|+||||||+||+++.++.+|
T Consensus 67 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~lH---~~~i~H~Dlkp~NIll~~~~~~k 142 (330)
T cd05601 67 QYAFQDKDNLYLVMEYQPGGDLLSLLNRY-EDQFDEDMAQFYLAELVLAIHSVH---QMGYVHRDIKPENVLIDRTGHIK 142 (330)
T ss_pred eeEEecCCeEEEEECCCCCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEcccCchHheEECCCCCEE
Confidence 99999999999999999999999999874 246888999999999999999999 89999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccc------cCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHH
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAY------TCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVN 861 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~ 861 (947)
|+|||++......... ......||+.|+|||++. ...++.++|||||||++|||++|+.||... ....
T Consensus 143 L~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~-----~~~~ 216 (330)
T cd05601 143 LADFGSAARLTANKMV-NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEG-----TSAK 216 (330)
T ss_pred eccCCCCeECCCCCce-eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCC-----CHHH
Confidence 9999999876543322 222346899999999986 456788999999999999999999998532 1111
Q ss_pred HHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 862 WVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 862 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
............ ..+. .......+.+++..|++ +|++|||+.+++++
T Consensus 217 ~~~~i~~~~~~~------~~~~-~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 217 TYNNIMNFQRFL------KFPE-DPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred HHHHHHcCCCcc------CCCC-CCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 111111111110 0011 11233457788889997 99999999998853
No 167
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-35 Score=321.67 Aligned_cols=257 Identities=28% Similarity=0.347 Sum_probs=210.8
Q ss_pred HHHhhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcc-cc
Q 002250 625 KEIIDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVR-HV 702 (947)
Q Consensus 625 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~ 702 (947)
..+.+.|.+.+.||+|.||.||+++.+ +|+.+|+|++...... .......+.+|+.+|+++. ||
T Consensus 31 ~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~--------------~~~~~~~v~~Ev~il~~l~~hp 96 (382)
T KOG0032|consen 31 EDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLR--------------GKEDREDVRREVAILQQLSGHP 96 (382)
T ss_pred ccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhcc--------------ccccHHHHHHHHHHHHhccCCC
Confidence 445678999999999999999999976 5999999999533221 1124568899999999998 99
Q ss_pred ccceEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecC
Q 002250 703 NVVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDL 782 (947)
Q Consensus 703 niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~ 782 (947)
|||.++++|+....+++|||+++||.|.+.+... .+++.....++.|++.+++||| +.+|+|||+||+|+|+..
T Consensus 97 niv~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH---~~gvvHrDlKpEN~L~~~ 170 (382)
T KOG0032|consen 97 NIVQLKDAFEDPDSVYLVMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLH---SLGVVHRDLKPENLLLAS 170 (382)
T ss_pred CEEEEEEEEEcCCeEEEEEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHH---hCCceeccCCHHHeeecc
Confidence 9999999999999999999999999999999875 3899999999999999999999 899999999999999964
Q ss_pred C----CCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCccc
Q 002250 783 E----WKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKD 858 (947)
Q Consensus 783 ~----~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~ 858 (947)
. +.+|++|||+|...... ......+||+.|+|||++....|+..+||||+||++|.|++|.+||........
T Consensus 171 ~~~~~~~ik~~DFGla~~~~~~---~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~- 246 (382)
T KOG0032|consen 171 KDEGSGRIKLIDFGLAKFIKPG---ERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEI- 246 (382)
T ss_pred ccCCCCcEEEeeCCCceEccCC---ceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHH-
Confidence 3 57999999999987762 234567899999999999999999999999999999999999999965422111
Q ss_pred HHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 859 IVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 859 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
.. ........ . ..+..........+++..|+..||.+|+|+.+++++
T Consensus 247 ~~----~i~~~~~~---f----~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 247 FL----AILRGDFD---F----TSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred HH----HHHcCCCC---C----CCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 11 11111110 0 122333445677888899999999999999999996
No 168
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=4.2e-35 Score=323.59 Aligned_cols=244 Identities=25% Similarity=0.290 Sum_probs=192.3
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcccc-ccceE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHV-NVVKL 707 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~-niv~l 707 (947)
+|++.+.||+|+||.||+|+.. +++.||||++.... .......+.+..|+++++.++|+ +|+++
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~--------------~~~~~~~~~~~~e~~~l~~~~~~~~i~~~ 66 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDV--------------IIQDDDVECTMVEKRVLALPGKPPFLTQL 66 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHH--------------hhhhhHHHHHHHHHHHHHhcCCCCceeee
Confidence 4778899999999999999965 57899999984211 11123446678899999999765 68889
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
++++...+..|+||||+++|+|.+++... ..+++.....++.|++.||+||| +.+|+||||||+||+++.++.+|
T Consensus 67 ~~~~~~~~~~~lv~E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~k 141 (324)
T cd05587 67 HSCFQTMDRLYFVMEYVNGGDLMYHIQQV--GKFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDAEGHIK 141 (324)
T ss_pred EEEEEcCCEEEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEEcCCCCEE
Confidence 99999999999999999999999999764 34788889999999999999999 89999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKM 867 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 867 (947)
|+|||++........ ......||+.|+|||++.+..++.++||||+||++|||++|+.||.... ..... ....
T Consensus 142 L~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~--~~~~~---~~i~ 214 (324)
T cd05587 142 IADFGMCKENIFGGK--TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED--EDELF---QSIM 214 (324)
T ss_pred EeecCcceecCCCCC--ceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC--HHHHH---HHHH
Confidence 999999874322211 2234579999999999999889999999999999999999999985321 11111 1111
Q ss_pred cccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCH
Q 002250 868 DSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSM 910 (947)
Q Consensus 868 ~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~ 910 (947)
.... ..+......+.+++.+|++.||.+|++.
T Consensus 215 ~~~~-----------~~~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 215 EHNV-----------SYPKSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred cCCC-----------CCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 1111 1112234567889999999999999976
No 169
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=6.6e-35 Score=312.44 Aligned_cols=257 Identities=23% Similarity=0.361 Sum_probs=202.2
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
+.|+..+.||+|++|.||+|... ++++||+|.++..... .........+.+|++++++++||||+++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~------------~~~~~~~~~~~~e~~~l~~l~~~~i~~~ 69 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDS------------PETKKEVNALECEIQLLKNLQHERIVQY 69 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccc------------hhhHHHHHHHHHHHHHHHhCCCCCeeee
Confidence 46888999999999999999954 6899999988432110 0011224568899999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
++++..++..++||||+++++|.+++... ..+++.....++.|++.|++||| +.+++||||+|+||++++++.++
T Consensus 70 ~~~~~~~~~~~~v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nilv~~~~~~~ 144 (263)
T cd06625 70 YGCLRDDETLSIFMEYMPGGSVKDQLKAY--GALTETVTRKYTRQILEGVEYLH---SNMIVHRDIKGANILRDSAGNVK 144 (263)
T ss_pred EEEEccCCeEEEEEEECCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEE
Confidence 99999999999999999999999999864 34788888999999999999999 89999999999999999999999
Q ss_pred EeccccceecccCCCCcc-eecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 002250 788 IADFGLAKIVQTGEAGDL-THVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSK 866 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 866 (947)
|+|||.++.......... .....|+..|+|||++.+..++.++||||+|+++|||++|+.||... ... ......
T Consensus 145 l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~----~~~-~~~~~~ 219 (263)
T cd06625 145 LGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEF----EAM-AAIFKI 219 (263)
T ss_pred EeecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCcccc----chH-HHHHHH
Confidence 999999976543221111 12345788999999999988999999999999999999999998432 111 111111
Q ss_pred ccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 867 MDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 867 ~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
.... .....+......+.+++.+|++.+|.+|||+.|++++
T Consensus 220 ~~~~---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 220 ATQP---------TNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred hccC---------CCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 1110 1112233345568889999999999999999999875
No 170
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=2e-35 Score=332.14 Aligned_cols=256 Identities=23% Similarity=0.322 Sum_probs=197.1
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
++|++.+.||+|+||+||+|+.. +++.||||++.... .........+.+|+.+++.++||||+++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--------------~~~~~~~~~~~~E~~il~~l~h~~iv~~ 66 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSE--------------MLEKEQVAHVRAERDILAEADNPWVVKL 66 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHH--------------hhhhhHHHHHHHHHHHHHhCCCCCCcce
Confidence 36888999999999999999965 68999999983110 0111234567889999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
++++.+++..|+||||+++|+|.+++... ..+++.....++.|++.||+||| +.+|+||||||+|||++.++.++
T Consensus 67 ~~~~~~~~~~~lv~E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~k 141 (364)
T cd05599 67 YYSFQDENYLYLIMEYLPGGDMMTLLMKK--DTFTEEETRFYIAETILAIDSIH---KLGYIHRDIKPDNLLLDAKGHIK 141 (364)
T ss_pred EEEEEcCCeEEEEECCCCCcHHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEE
Confidence 99999999999999999999999999864 35889999999999999999999 89999999999999999999999
Q ss_pred EeccccceecccCCCCc------------------------------------ceecccccccccCccccccCCCCCccc
Q 002250 788 IADFGLAKIVQTGEAGD------------------------------------LTHVIAGTHGYIAPEYAYTCKINEKSD 831 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~D 831 (947)
|+|||++.......... .....+||+.|+|||++....++.++|
T Consensus 142 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D 221 (364)
T cd05599 142 LSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECD 221 (364)
T ss_pred EeecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeee
Confidence 99999987543211000 001246999999999999888999999
Q ss_pred hHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCC--
Q 002250 832 VYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPS-- 909 (947)
Q Consensus 832 v~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-- 909 (947)
||||||++|||++|..||... +..+............. .+... .....+.+++.+|+. +|.+|++
T Consensus 222 iwSlG~il~el~~G~~Pf~~~-----~~~~~~~~i~~~~~~~~---~~~~~----~~s~~~~~li~~ll~-~p~~R~~~~ 288 (364)
T cd05599 222 WWSLGVIMYEMLVGYPPFCSD-----NPQETYRKIINWKETLQ---FPDEV----PLSPEAKDLIKRLCC-EAERRLGNN 288 (364)
T ss_pred eecchhHHHHhhcCCCCCCCC-----CHHHHHHHHHcCCCccC---CCCCC----CCCHHHHHHHHHHcc-CHhhcCCCC
Confidence 999999999999999999532 11121111111111100 00000 123456677888886 8999997
Q ss_pred -HHHHHHH
Q 002250 910 -MRVVVQM 916 (947)
Q Consensus 910 -~~ev~~~ 916 (947)
+.|++++
T Consensus 289 ~~~~ll~h 296 (364)
T cd05599 289 GVNEIKSH 296 (364)
T ss_pred CHHHHhcC
Confidence 8888763
No 171
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.4e-35 Score=324.21 Aligned_cols=260 Identities=23% Similarity=0.352 Sum_probs=202.5
Q ss_pred hccCCcccccccCceeEEEEEeC--------CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN--------SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV- 699 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l- 699 (947)
++|.+.+.||+|+||.||+|+.. ....||+|.+.... .......+.+|+.+++++
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~----------------~~~~~~~~~~E~~~l~~l~ 75 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA----------------TDKDLADLISEMELMKLIG 75 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC----------------ChHHHHHHHHHHHHHHhcc
Confidence 67889999999999999999742 24579999873110 112235678899999999
Q ss_pred cccccceEEEEEecCCccEEEEeccCCCChHHHhhhcC--------------CccCCHHHHHHHHHHHHHHHHHHhcCCC
Q 002250 700 RHVNVVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCH--------------KIEMDWVVRYAIAVGAAKGLEYLHHGFD 765 (947)
Q Consensus 700 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~--------------~~~~~~~~~~~i~~~ia~~l~yLH~~~~ 765 (947)
+||||+++++++..++..++||||+++|+|.+++.... ...+++.....++.|++.||+||| +
T Consensus 76 ~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~ 152 (314)
T cd05099 76 KHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLE---S 152 (314)
T ss_pred CCCCeeeEEEEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHH---H
Confidence 69999999999999999999999999999999997632 235788999999999999999999 8
Q ss_pred CCeEeccCCCCCeEecCCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-
Q 002250 766 RPVIHRDVKSSNILLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT- 844 (947)
Q Consensus 766 ~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt- 844 (947)
.+++||||||+||++++++.+||+|||.++...............++..|+|||++.+..++.++||||||+++|||++
T Consensus 153 ~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~ 232 (314)
T cd05099 153 RRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTL 232 (314)
T ss_pred CCeeeccccceeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhC
Confidence 9999999999999999999999999999986543322111112234567999999998889999999999999999999
Q ss_pred CCCCCCCCCCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCC
Q 002250 845 GKRPIVPEFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAEP 922 (947)
Q Consensus 845 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 922 (947)
|..||... ....+.... .... ..+.+...+..+.+++.+|++.+|++|||+.|+++.|+++..
T Consensus 233 g~~p~~~~--~~~~~~~~~----~~~~---------~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~ 295 (314)
T cd05099 233 GGSPYPGI--PVEELFKLL----REGH---------RMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLA 295 (314)
T ss_pred CCCCCCCC--CHHHHHHHH----HcCC---------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 88887422 111122211 1111 011222334568889999999999999999999999998754
No 172
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-38 Score=351.66 Aligned_cols=461 Identities=25% Similarity=0.271 Sum_probs=384.5
Q ss_pred eeEeccCCCccccccCcccccCCcccceeeccCccccCcCchhhhcCCCccEEeCcCccCcCCCCCcccccccceeecCC
Q 002250 38 VAEINLPEQQLLGVVPFDSICGLQALQKINLGTNFLYGTITEGLKSCTRLQVLDLGNNSFSGEVPDLSMLHELSFLNLNS 117 (947)
Q Consensus 38 v~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~l~~l~~L~~L~L~~ 117 (947)
..+||++++.+.. .| ..++.+.+|+.|+++.|.| ...|.....+.+|++|+|.+|.+...+..+..+++|++|++|.
T Consensus 47 L~~l~lsnn~~~~-fp-~~it~l~~L~~ln~s~n~i-~~vp~s~~~~~~l~~lnL~~n~l~~lP~~~~~lknl~~LdlS~ 123 (1081)
T KOG0618|consen 47 LKSLDLSNNQISS-FP-IQITLLSHLRQLNLSRNYI-RSVPSSCSNMRNLQYLNLKNNRLQSLPASISELKNLQYLDLSF 123 (1081)
T ss_pred eEEeecccccccc-CC-chhhhHHHHhhcccchhhH-hhCchhhhhhhcchhheeccchhhcCchhHHhhhcccccccch
Confidence 6788898877654 44 5699999999999999999 5667889999999999999999998888999999999999999
Q ss_pred CCccCccCcccccccCCCceeeCCCC-CCCCCCCChhhcccccCcEEEccCccccccCCccCCCCCCCCEEECcCccccc
Q 002250 118 SGISGKFPWKSLENLTNLEFLSLGDN-PFDPSPFPMEVLKLEKLYWLYLTNCSVTGQIPEGIGNLTQLQNLELSDNELFG 196 (947)
Q Consensus 118 n~i~~~~~~~~l~~l~~L~~L~Ls~n-~i~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 196 (947)
|++. .+| ..+..++.++.++.++| ++.. ++... ++.++|..|.+.+.++..+.+++. .|+|.+|.+.
T Consensus 124 N~f~-~~P-l~i~~lt~~~~~~~s~N~~~~~------lg~~~-ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~- 191 (1081)
T KOG0618|consen 124 NHFG-PIP-LVIEVLTAEEELAASNNEKIQR------LGQTS-IKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME- 191 (1081)
T ss_pred hccC-CCc-hhHHhhhHHHHHhhhcchhhhh------hcccc-chhhhhhhhhcccchhcchhhhhe--eeecccchhh-
Confidence 9997 555 68999999999999999 2222 22222 889999999999999999888877 8999999985
Q ss_pred ccCccccCCCCCcEEEeecccccccCCccCCCCCCccEEeccCCCCCCCCccccccCCCCEEEccCccCcccCCCCccCC
Q 002250 197 EIPAGIVKLNKLWQLELYNNSLSGRLPVGFSNLTNLMNFDVSQNRLEGDLSELRFLNQLSSLHLFENQFSGEIPEEFGEF 276 (947)
Q Consensus 197 ~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l 276 (947)
...+..+.+|+.|....|+++.. --..++|+.|+.++|.++.. ..-....+|+.+++++|+++ .+|++++.+
T Consensus 192 --~~dls~~~~l~~l~c~rn~ls~l----~~~g~~l~~L~a~~n~l~~~-~~~p~p~nl~~~dis~n~l~-~lp~wi~~~ 263 (1081)
T KOG0618|consen 192 --VLDLSNLANLEVLHCERNQLSEL----EISGPSLTALYADHNPLTTL-DVHPVPLNLQYLDISHNNLS-NLPEWIGAC 263 (1081)
T ss_pred --hhhhhhccchhhhhhhhcccceE----EecCcchheeeeccCcceee-ccccccccceeeecchhhhh-cchHHHHhc
Confidence 34678889999999999999842 23458899999999999832 23344568999999999999 567999999
Q ss_pred CcCcEEEccCccccccCCcCccCcccccccccccccccCCCCCCcccCCccceeeecccccCCcCCccccCCCC-ccEEE
Q 002250 277 KHLTELSLYTNRLTGTLPQKLGSWADFNYVDVSENLLTGPIPPDMCKTGAMTDLLVLQNNFNGTVPETYANCKS-LIRFR 355 (947)
Q Consensus 277 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~L~l~~n~~~~~~p~~~~~l~~-L~~L~ 355 (947)
.+|+.|+..+|+++ .+|..+....+|+.|++..|.+. -+|+...+...+++|++..|++....+..+.-... |..|+
T Consensus 264 ~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln 341 (1081)
T KOG0618|consen 264 ANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLN 341 (1081)
T ss_pred ccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHh
Confidence 99999999999997 89999999999999999999998 78888999999999999999998666655555544 88888
Q ss_pred cccccccccCCCCCCCCCCcceeccccCCcCCCCCCcccccccccEEEccCccccccCCCCCCCCCcceEEEcccCcccC
Q 002250 356 VNNNSLSGTIPPGIWSLPNLSIIDLSTNQFEGPVTDDIGNAKSLALLLLANNRFSGELPSKISEASSLVSIQLSLNQFSG 435 (947)
Q Consensus 356 L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 435 (947)
.+.|.+.......=..++.|+.|++.+|.++......+.++..|+.|+|++|++.......+.++..|++|+||+|+++
T Consensus 342 ~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~- 420 (1081)
T KOG0618|consen 342 VSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT- 420 (1081)
T ss_pred hhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-
Confidence 8999988333222234678999999999999888788999999999999999998444456899999999999999999
Q ss_pred CCCcccccccccchhhccccccCCCCCcccccccccceeeccCceeeeecCCCCCccCcCcEEECCCCccCCccCCccc-
Q 002250 436 QIPLDIGKLKKLSSLYLHDNMFSGPLPYSIGSCVSLTDINFAQNSLSGKIPDSLGSLPSLNSLNLSNNKFSGEIPISLT- 514 (947)
Q Consensus 436 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~- 514 (947)
.+|..+.+++.|++|...+|++. ..| .+..+++|+.+|+|.|+|+...-..-...++|++|||++|.-.-..-..+.
T Consensus 421 ~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~l~~d~~~l~~ 498 (1081)
T KOG0618|consen 421 TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTRLVFDHKTLKV 498 (1081)
T ss_pred hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCcccccchhhhHH
Confidence 89999999999999999999998 677 899999999999999999864333333348999999999984322222222
Q ss_pred ccccceeeCCCC
Q 002250 515 YPKLSLLDLSNN 526 (947)
Q Consensus 515 ~~~L~~L~ls~N 526 (947)
+..+..++++-|
T Consensus 499 l~~l~~~~i~~~ 510 (1081)
T KOG0618|consen 499 LKSLSQMDITLN 510 (1081)
T ss_pred hhhhhheecccC
Confidence 355666666655
No 173
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=2.1e-35 Score=321.98 Aligned_cols=259 Identities=24% Similarity=0.339 Sum_probs=200.4
Q ss_pred hccCCcccccccCceeEEEEEeCC-Cc--EEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-ccccc
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLNS-GK--ELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-RHVNV 704 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~~-~~--~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~ni 704 (947)
++|++.+.||+|+||.||+|..++ +. .+|+|.+... ......+.+.+|+.+++++ +||||
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~----------------~~~~~~~~~~~E~~~l~~l~~hp~i 65 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEF----------------ASENDHRDFAGELEVLCKLGHHPNI 65 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEcccc----------------CCHHHHHHHHHHHHHHHhhcCCCch
Confidence 578889999999999999998753 33 4788877310 0112235688999999999 79999
Q ss_pred ceEEEEEecCCccEEEEeccCCCChHHHhhhcCC--------------ccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEe
Q 002250 705 VKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHK--------------IEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIH 770 (947)
Q Consensus 705 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--------------~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH 770 (947)
+++++++...+..++||||+++++|.+++..... ..+++.....++.|++.|++||| +.+|+|
T Consensus 66 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH---~~~ivH 142 (297)
T cd05089 66 INLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLS---EKQFIH 142 (297)
T ss_pred hheEEEEccCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHH---HCCccc
Confidence 9999999999999999999999999999975321 24788899999999999999999 899999
Q ss_pred ccCCCCCeEecCCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCC
Q 002250 771 RDVKSSNILLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPI 849 (947)
Q Consensus 771 ~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~ 849 (947)
|||||+||++++++.+||+|||++....... .......+..|+|||++....++.++|||||||++|||++ |..||
T Consensus 143 ~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf 219 (297)
T cd05089 143 RDLAARNVLVGENLASKIADFGLSRGEEVYV---KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPY 219 (297)
T ss_pred CcCCcceEEECCCCeEEECCcCCCcccccee---ccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCC
Confidence 9999999999999999999999986322111 1111123567999999988889999999999999999998 99998
Q ss_pred CCCCCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCCCC
Q 002250 850 VPEFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAEPCS 924 (947)
Q Consensus 850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 924 (947)
... ...+......... ....+......+.+++.+|++.+|.+|||+.++++.|+++....
T Consensus 220 ~~~-----~~~~~~~~~~~~~----------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~ 279 (297)
T cd05089 220 CGM-----TCAELYEKLPQGY----------RMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR 279 (297)
T ss_pred CCC-----CHHHHHHHHhcCC----------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 432 1111111111110 01112223456889999999999999999999999998876544
No 174
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.8e-35 Score=326.61 Aligned_cols=247 Identities=25% Similarity=0.286 Sum_probs=190.0
Q ss_pred ccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHH-HHhhccccccceEEEEEe
Q 002250 635 NLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVA-TLSAVRHVNVVKLYCSIT 712 (947)
Q Consensus 635 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~ 712 (947)
+.||+|+||+||+|+.. +|+.||||++.... .........+..|.. +++.++||||+++++++.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~--------------~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~ 66 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKI--------------VLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQ 66 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHH--------------hhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEe
Confidence 46899999999999965 78999999983210 011122344555554 467789999999999999
Q ss_pred cCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEeccc
Q 002250 713 SEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFG 792 (947)
Q Consensus 713 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 792 (947)
.++..++||||+++|+|.+++... ..+++.....++.||+.||+||| +.+|+||||||+||+++.++.+||+|||
T Consensus 67 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH---~~givH~Dlkp~NIll~~~~~~kL~DfG 141 (325)
T cd05604 67 TTEKLYFVLDFVNGGELFFHLQRE--RSFPEPRARFYAAEIASALGYLH---SINIVYRDLKPENILLDSQGHVVLTDFG 141 (325)
T ss_pred cCCEEEEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEeecC
Confidence 999999999999999999988763 45888899999999999999999 8999999999999999999999999999
Q ss_pred cceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcccccc
Q 002250 793 LAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDSRDS 872 (947)
Q Consensus 793 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 872 (947)
+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||... +..+...........
T Consensus 142 ~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~-----~~~~~~~~~~~~~~~ 214 (325)
T cd05604 142 LCKEGIAQS--DTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCR-----DVAEMYDNILHKPLV 214 (325)
T ss_pred CcccCCCCC--CCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCC-----CHHHHHHHHHcCCcc
Confidence 987532221 1223456899999999999999999999999999999999999998532 222222222111110
Q ss_pred ccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 002250 873 MLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLE 918 (947)
Q Consensus 873 ~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~ 918 (947)
........+.+++.+|++.+|.+||++.+.++.+.
T Consensus 215 -----------~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~ 249 (325)
T cd05604 215 -----------LRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQ 249 (325)
T ss_pred -----------CCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHh
Confidence 11123345778899999999999998865444433
No 175
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=9.1e-35 Score=319.16 Aligned_cols=243 Identities=28% Similarity=0.410 Sum_probs=189.5
Q ss_pred ccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-cccccceEEEEEe
Q 002250 635 NLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-RHVNVVKLYCSIT 712 (947)
Q Consensus 635 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 712 (947)
+.||+|+||+||+|+.. +++.||||++.... .........+..|..++... +||||+++++++.
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--------------~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~ 66 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDV--------------VLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQ 66 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHH--------------hhhcchHHHHHHHHHHHHhccCCCcCcceEEEEE
Confidence 36899999999999965 57899999984211 01112344566788888764 8999999999999
Q ss_pred cCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEeccc
Q 002250 713 SEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFG 792 (947)
Q Consensus 713 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 792 (947)
+++..++||||+++|+|.+++... ..+++.....++.|++.||+||| +.+|+||||||+||+++.++.+||+|||
T Consensus 67 ~~~~~~lv~ey~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg 141 (316)
T cd05619 67 TKENLFFVMEYLNGGDLMFHIQSC--HKFDLPRATFYAAEIICGLQFLH---SKGIVYRDLKLDNILLDTDGHIKIADFG 141 (316)
T ss_pred eCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEccCC
Confidence 999999999999999999999864 35788888999999999999999 8999999999999999999999999999
Q ss_pred cceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcccccc
Q 002250 793 LAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDSRDS 872 (947)
Q Consensus 793 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 872 (947)
+++....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.... .....+.+ ....
T Consensus 142 ~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~--~~~~~~~i---~~~~-- 212 (316)
T cd05619 142 MCKENMLGDA--KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHD--EEELFQSI---RMDN-- 212 (316)
T ss_pred cceECCCCCC--ceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCC--HHHHHHHH---HhCC--
Confidence 9875322221 1224568999999999998889999999999999999999999985321 11111111 1010
Q ss_pred ccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHH-HHH
Q 002250 873 MLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMR-VVV 914 (947)
Q Consensus 873 ~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~-ev~ 914 (947)
+.+ +......+.+++.+|++.||++||++. ++.
T Consensus 213 ------~~~---~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 213 ------PCY---PRWLTREAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred ------CCC---CccCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence 111 112334577889999999999999997 443
No 176
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=4.1e-35 Score=313.39 Aligned_cols=254 Identities=26% Similarity=0.419 Sum_probs=204.3
Q ss_pred hhccCCcccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
.++|++.+.||+|+||.||+|...++..+|+|.+... ......+.+|++++++++|+||+++
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~------------------~~~~~~~~~e~~~l~~l~~~~i~~~ 66 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG------------------SMSVEAFLAEANVMKTLQHDKLVKL 66 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCC------------------hhHHHHHHHHHHHHHhcCCCCcceE
Confidence 3678899999999999999999877888999987321 1234578899999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
++++.. ...++||||+++++|.+++.+......++..+..++.|++.|++||| +.+++||||||+||+++.++.++
T Consensus 67 ~~~~~~-~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~ni~i~~~~~~~ 142 (260)
T cd05073 67 HAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCK 142 (260)
T ss_pred EEEEcC-CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEE
Confidence 999887 77899999999999999998765567899999999999999999999 88999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHhh
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNWVYSK 866 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~ 866 (947)
|+|||.+......... ......++..|+|||++..+.++.++|+|||||++||+++ |+.||... ...+..+..
T Consensus 143 l~d~~~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~--~~~~~~~~~--- 216 (260)
T cd05073 143 IADFGLARVIEDNEYT-AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM--SNPEVIRAL--- 216 (260)
T ss_pred ECCCcceeeccCCCcc-cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCC--CHHHHHHHH---
Confidence 9999999765433221 1112345678999999988889999999999999999999 88888432 111122211
Q ss_pred ccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhc
Q 002250 867 MDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEE 919 (947)
Q Consensus 867 ~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~ 919 (947)
..... .+.....+..+.+++.+|++.+|++||++.++.+.|+.
T Consensus 217 -~~~~~---------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 217 -ERGYR---------MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred -hCCCC---------CCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 11110 01112344568899999999999999999999999975
No 177
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=5.2e-35 Score=313.96 Aligned_cols=255 Identities=25% Similarity=0.321 Sum_probs=199.0
Q ss_pred hhccCCcccccccCceeEEEEEe-CCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccce
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVL-NSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVK 706 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 706 (947)
.++|++.+.||+|+||.||+|+. .+++.||+|++... .......+.+|+.++++++||||++
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~-----------------~~~~~~~~~~e~~~l~~~~h~~ii~ 70 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLE-----------------PGDDFSLIQQEIFMVKECKHCNIVA 70 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecC-----------------ccchHHHHHHHHHHHHhcCCCCeee
Confidence 46799999999999999999996 47889999988321 1123346788999999999999999
Q ss_pred EEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCe
Q 002250 707 LYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKP 786 (947)
Q Consensus 707 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 786 (947)
+++++..++..++||||+++++|.++++.. ..+++..+..++.|++.|++||| +.+|+|||++|+||+++.++.+
T Consensus 71 ~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nill~~~~~~ 145 (267)
T cd06646 71 YFGSYLSREKLWICMEYCGGGSLQDIYHVT--GPLSELQIAYVCRETLQGLAYLH---SKGKMHRDIKGANILLTDNGDV 145 (267)
T ss_pred eeEEEEeCCEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCE
Confidence 999999999999999999999999999753 35788999999999999999999 8899999999999999999999
Q ss_pred EEeccccceecccCCCCcceecccccccccCccccc---cCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHH
Q 002250 787 RIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAY---TCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWV 863 (947)
Q Consensus 787 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~ 863 (947)
+|+|||++........ ......|+..|+|||.+. ...++.++|||||||++|||++|+.||....... ..
T Consensus 146 ~l~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~-~~---- 218 (267)
T cd06646 146 KLADFGVAAKITATIA--KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR-AL---- 218 (267)
T ss_pred EECcCccceeeccccc--ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhh-hh----
Confidence 9999999986543221 112346889999999874 3447789999999999999999999984321100 00
Q ss_pred HhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 002250 864 YSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQML 917 (947)
Q Consensus 864 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L 917 (947)
. ...... ..+............+.+++.+|++.+|++|||+.++++.+
T Consensus 219 ~-~~~~~~-----~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 219 F-LMSKSN-----FQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred e-eeecCC-----CCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 0 000000 00000111122345788999999999999999999998754
No 178
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=2.7e-35 Score=319.27 Aligned_cols=269 Identities=27% Similarity=0.358 Sum_probs=199.2
Q ss_pred hccCCcccccccCceeEEEEEeC-----CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccc
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-----SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVN 703 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n 703 (947)
..|++.+.||+|+||.||+|..+ +++.||||++... .......+.+|++++++++|||
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~-----------------~~~~~~~~~~e~~~l~~l~h~~ 66 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS-----------------TAEHLRDFEREIEILKSLQHDN 66 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC-----------------CHHHHHHHHHHHHHHHhCCCCC
Confidence 46788899999999999999743 5789999987321 1122457889999999999999
Q ss_pred cceEEEEEec--CCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEec
Q 002250 704 VVKLYCSITS--EDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLD 781 (947)
Q Consensus 704 iv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~ 781 (947)
|+++++++.. ....++||||+++++|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++
T Consensus 67 iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~aL~~LH---~~~i~H~dlkp~nili~ 142 (284)
T cd05081 67 IVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKH-RERLDHRKLLLYASQICKGMEYLG---SKRYVHRDLATRNILVE 142 (284)
T ss_pred eeEEEEEEccCCCCceEEEEEecCCCCHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHhhEEEC
Confidence 9999998754 34578999999999999999763 335899999999999999999999 89999999999999999
Q ss_pred CCCCeEEeccccceecccCCCCcc-eecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHH
Q 002250 782 LEWKPRIADFGLAKIVQTGEAGDL-THVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIV 860 (947)
Q Consensus 782 ~~~~~kl~DfG~a~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~ 860 (947)
+++.++|+|||+++.......... .....++..|+|||++.+..++.++|||||||++|||++|..|+..... ...
T Consensus 143 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~---~~~ 219 (284)
T cd05081 143 SENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPA---EFM 219 (284)
T ss_pred CCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcch---hhh
Confidence 999999999999987644322111 1111234569999999888899999999999999999998877532210 000
Q ss_pred HHHHhhcccccc---cccccc-CCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccC
Q 002250 861 NWVYSKMDSRDS---MLTVVD-PNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAE 921 (947)
Q Consensus 861 ~~~~~~~~~~~~---~~~~~d-~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~ 921 (947)
+........... +.+... ..........+..+.+++.+||+.+|++||||.|+++.|++++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~~ 284 (284)
T cd05081 220 RMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAIR 284 (284)
T ss_pred hhcccccccccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhcC
Confidence 000000000000 000000 0011112234457889999999999999999999999998763
No 179
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=3.8e-35 Score=312.83 Aligned_cols=248 Identities=21% Similarity=0.296 Sum_probs=193.0
Q ss_pred ccccCceeEEEEEeC---CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEEEEec
Q 002250 637 IGKGGSGNVYKVVLN---SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYCSITS 713 (947)
Q Consensus 637 iG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 713 (947)
||+|+||.||+|.+. .+..||+|++.... .....+.+.+|+.++++++||||+++++++..
T Consensus 3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~----------------~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~ 66 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN----------------EKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA 66 (257)
T ss_pred cCCCCcccEEEEEEecCCCceeEEEEEccccc----------------ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC
Confidence 899999999999854 35579999873211 11223568899999999999999999998864
Q ss_pred CCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEecccc
Q 002250 714 EDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFGL 793 (947)
Q Consensus 714 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 793 (947)
...++||||+++++|.+++... ...+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||+
T Consensus 67 -~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~ 141 (257)
T cd05115 67 -EALMLVMEMASGGPLNKFLSGK-KDEITVSNVVELMHQVSMGMKYLE---GKNFVHRDLAARNVLLVNQHYAKISDFGL 141 (257)
T ss_pred -CCeEEEEEeCCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHH---hcCeeecccchheEEEcCCCcEEeccCCc
Confidence 5779999999999999998753 346899999999999999999999 88999999999999999999999999999
Q ss_pred ceecccCCCCc-ceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhccccc
Q 002250 794 AKIVQTGEAGD-LTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNWVYSKMDSRD 871 (947)
Q Consensus 794 a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 871 (947)
+.......... ......++..|+|||++....++.++||||||+++||+++ |+.||.... ..+....+ ....
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--~~~~~~~~---~~~~- 215 (257)
T cd05115 142 SKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMK--GPEVMSFI---EQGK- 215 (257)
T ss_pred cccccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCC--HHHHHHHH---HCCC-
Confidence 97554332211 1111223578999999988889999999999999999997 999985321 11111111 1111
Q ss_pred cccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 002250 872 SMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEA 920 (947)
Q Consensus 872 ~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 920 (947)
....+..++..+.+++.+||..+|++||++.+|.+.|+..
T Consensus 216 ---------~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 216 ---------RLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred ---------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 1122233456788999999999999999999999999864
No 180
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=3.4e-35 Score=315.34 Aligned_cols=257 Identities=24% Similarity=0.383 Sum_probs=202.3
Q ss_pred hccCCcccccccCceeEEEEEeC-C---CcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcccccc
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-S---GKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNV 704 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 704 (947)
.+|++.+.||+|+||.||+|... + +..+|+|.+.... .......+.+|+.++++++||||
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~----------------~~~~~~~~~~e~~~l~~l~h~~i 67 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY----------------TEKQRRDFLSEASIMGQFDHPNI 67 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC----------------CHHHHHHHHHHHHHHHhCCCCCc
Confidence 57888999999999999999854 2 3379999873211 01224578899999999999999
Q ss_pred ceEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCC
Q 002250 705 VKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEW 784 (947)
Q Consensus 705 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~ 784 (947)
+++++++..++..++||||+++++|.+++.... ..+++.....++.|++.|++||| +.+++||||||+||+++.++
T Consensus 68 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~ 143 (267)
T cd05066 68 IHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILVNSNL 143 (267)
T ss_pred ceEEEEEecCCccEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHH---HCCEeehhhchhcEEECCCC
Confidence 999999999999999999999999999998643 45799999999999999999999 89999999999999999999
Q ss_pred CeEEeccccceecccCCCCcc-eecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHH
Q 002250 785 KPRIADFGLAKIVQTGEAGDL-THVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNW 862 (947)
Q Consensus 785 ~~kl~DfG~a~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~ 862 (947)
.++++|||++........... .....++..|+|||++.+..++.++|+||||+++||+++ |..||.... ..+....
T Consensus 144 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~--~~~~~~~ 221 (267)
T cd05066 144 VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMS--NQDVIKA 221 (267)
T ss_pred eEEeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCC--HHHHHHH
Confidence 999999999986644322111 111223568999999998889999999999999999887 999984321 1112221
Q ss_pred HHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 002250 863 VYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEA 920 (947)
Q Consensus 863 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 920 (947)
.. +. .. .+.....+..+.+++.+|++.+|.+||+|.++++.|+++
T Consensus 222 ~~---~~-~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 222 IE---EG-YR---------LPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred Hh---CC-Cc---------CCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 11 11 00 111223355688999999999999999999999999874
No 181
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=7.7e-35 Score=331.02 Aligned_cols=261 Identities=20% Similarity=0.196 Sum_probs=198.0
Q ss_pred hhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccce
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVK 706 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 706 (947)
...|.+.+.||+|+||.||+|... .++.||||... ...+.+|++++++++|+|||+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~-----------------------~~~~~~E~~iL~~L~HpnIv~ 224 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW-----------------------YASSVHEARLLRRLSHPAVLA 224 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc-----------------------ccCHHHHHHHHHHCCCCCCCc
Confidence 346888999999999999999966 58899999541 123568999999999999999
Q ss_pred EEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCe
Q 002250 707 LYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKP 786 (947)
Q Consensus 707 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 786 (947)
+++++..++..++|||++ .++|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+
T Consensus 225 l~~~~~~~~~~~lv~e~~-~~~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDLKP~NILl~~~~~v 299 (461)
T PHA03211 225 LLDVRVVGGLTCLVLPKY-RSDLYTYLGAR-LRPLGLAQVTAVARQLLSAIDYIH---GEGIIHRDIKTENVLVNGPEDI 299 (461)
T ss_pred EEEEEEECCEEEEEEEcc-CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCEEECcCCHHHEEECCCCCE
Confidence 999999999999999999 47898888753 236899999999999999999999 8999999999999999999999
Q ss_pred EEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCC------CcccHH
Q 002250 787 RIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFG------DSKDIV 860 (947)
Q Consensus 787 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~------~~~~~~ 860 (947)
||+|||+++...............||+.|+|||++.+..++.++|||||||++|||++|..|+..... ....+.
T Consensus 300 kL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~ 379 (461)
T PHA03211 300 CLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQIL 379 (461)
T ss_pred EEcccCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHH
Confidence 99999999865433222222245699999999999998999999999999999999998877643221 111222
Q ss_pred HHHHhhccccccccccc----------------cCCC-CccC---HHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 861 NWVYSKMDSRDSMLTVV----------------DPNI-SEIL---KEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 861 ~~~~~~~~~~~~~~~~~----------------d~~~-~~~~---~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
+.+.........+.... .+.. .... ......+.+++.+|++.||.+|||+.|++++
T Consensus 380 ~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 380 RIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred HHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 22221110000000000 0000 0000 0122357889999999999999999999975
No 182
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=2.7e-35 Score=336.84 Aligned_cols=259 Identities=19% Similarity=0.288 Sum_probs=190.6
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
++|++.+.||+|+||.||+|... +++.||||++.. ......+|+.+++.++||||+++
T Consensus 66 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~---------------------~~~~~~~Ei~il~~l~h~niv~l 124 (440)
T PTZ00036 66 KSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQ---------------------DPQYKNRELLIMKNLNHINIIFL 124 (440)
T ss_pred CeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEec---------------------CcchHHHHHHHHHhcCCCCCcce
Confidence 57889999999999999999965 689999998731 11234579999999999999999
Q ss_pred EEEEecC--------CccEEEEeccCCCChHHHhhhc--CCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCC
Q 002250 708 YCSITSE--------DSNLLVYEYLPNGSLWDRLHTC--HKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSN 777 (947)
Q Consensus 708 ~~~~~~~--------~~~~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~N 777 (947)
++++... ...++||||++ +++.+++... ....+++.....++.|++.||+||| +.+|+||||||+|
T Consensus 125 ~~~~~~~~~~~~~~~~~l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH---~~~IiHrDLKp~N 200 (440)
T PTZ00036 125 KDYYYTECFKKNEKNIFLNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIH---SKFICHRDLKPQN 200 (440)
T ss_pred eeeEeecccccCCCceEEEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCcCHHH
Confidence 9887432 13568999997 4787777542 3456889999999999999999999 8999999999999
Q ss_pred eEecCCC-CeEEeccccceecccCCCCcceecccccccccCccccccC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCC
Q 002250 778 ILLDLEW-KPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTC-KINEKSDVYSFGVVLMELVTGKRPIVPEFGD 855 (947)
Q Consensus 778 Ill~~~~-~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~ 855 (947)
|+++.++ .+||+|||+|+....... .....||+.|+|||++.+. .++.++|||||||++|||++|.+||.....
T Consensus 201 ILl~~~~~~vkL~DFGla~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~- 276 (440)
T PTZ00036 201 LLIDPNTHTLKLCDFGSAKNLLAGQR---SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSS- 276 (440)
T ss_pred EEEcCCCCceeeeccccchhccCCCC---cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh-
Confidence 9999664 799999999986543322 1234689999999998764 689999999999999999999999854311
Q ss_pred cccHHHHHHhhccccc--------cccccccCC-----C-CccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 856 SKDIVNWVYSKMDSRD--------SMLTVVDPN-----I-SEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 856 ~~~~~~~~~~~~~~~~--------~~~~~~d~~-----~-~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
...+............ ......-+. + ..++...+.++.+++.+|+.+||.+|||+.|++++
T Consensus 277 ~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 277 VDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred HHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 1111111111100000 000000000 0 01122234578899999999999999999999844
No 183
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=3e-35 Score=316.20 Aligned_cols=257 Identities=23% Similarity=0.382 Sum_probs=201.7
Q ss_pred hccCCcccccccCceeEEEEEeC-CC---cEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcccccc
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SG---KELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNV 704 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~---~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 704 (947)
..|++.+.||+|+||.||+|... ++ ..||||++... ........|..|+.++++++||||
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~----------------~~~~~~~~~~~e~~~l~~l~h~ni 67 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSG----------------YTEKQRRDFLSEASIMGQFDHPNI 67 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCC----------------CCHHHHHHHHHHHHHHHhCCCcCc
Confidence 45788899999999999999965 33 36999987311 011234678999999999999999
Q ss_pred ceEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCC
Q 002250 705 VKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEW 784 (947)
Q Consensus 705 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~ 784 (947)
+++++++..++..++||||+++++|.+++... ...+++..++.++.|++.|++||| +.+++||||||+||+++.++
T Consensus 68 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~l~~al~~lH---~~g~~H~dl~p~nili~~~~ 143 (269)
T cd05065 68 IHLEGVVTKSRPVMIITEFMENGALDSFLRQN-DGQFTVIQLVGMLRGIAAGMKYLS---EMNYVHRDLAARNILVNSNL 143 (269)
T ss_pred ceEEEEECCCCceEEEEecCCCCcHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccChheEEEcCCC
Confidence 99999999999999999999999999999764 345899999999999999999999 89999999999999999999
Q ss_pred CeEEeccccceecccCCCCccee-ccc--ccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHH
Q 002250 785 KPRIADFGLAKIVQTGEAGDLTH-VIA--GTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIV 860 (947)
Q Consensus 785 ~~kl~DfG~a~~~~~~~~~~~~~-~~~--gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~ 860 (947)
.++++|||.+............. ... .+..|+|||++....++.++||||||+++|||++ |..||.... ..+..
T Consensus 144 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~--~~~~~ 221 (269)
T cd05065 144 VCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS--NQDVI 221 (269)
T ss_pred cEEECCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCC--HHHHH
Confidence 99999999987654332211111 111 2457999999998899999999999999999987 999985321 11222
Q ss_pred HHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 002250 861 NWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEA 920 (947)
Q Consensus 861 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 920 (947)
.++. .. .. .+.+.+.+..+.+++.+||+.+|++||++.+++++|+++
T Consensus 222 ~~i~---~~-~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 222 NAIE---QD-YR---------LPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred HHHH---cC-Cc---------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 2221 11 00 111223456688999999999999999999999999864
No 184
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=4e-35 Score=323.40 Aligned_cols=240 Identities=25% Similarity=0.304 Sum_probs=186.1
Q ss_pred ccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHH-HHhhccccccceEEEEEe
Q 002250 635 NLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVA-TLSAVRHVNVVKLYCSIT 712 (947)
Q Consensus 635 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~ 712 (947)
+.||+|+||.||+|+.. +++.||+|++.... .........+.+|.. +++.++||||+++++++.
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~--------------~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~ 66 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKT--------------ILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQ 66 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHH--------------HHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEE
Confidence 46899999999999965 68899999983110 011122344555554 578899999999999999
Q ss_pred cCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEeccc
Q 002250 713 SEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFG 792 (947)
Q Consensus 713 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 792 (947)
..+..|+||||+++|+|.+++... ..+++.....++.||+.||+||| +.+|+||||||+||+++.++.+||+|||
T Consensus 67 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 141 (321)
T cd05603 67 TAEKLYFVLDYVNGGELFFHLQRE--RCFLEPRARFYAAEVASAIGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFG 141 (321)
T ss_pred cCCEEEEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEccCC
Confidence 999999999999999999988753 45778888889999999999999 8999999999999999999999999999
Q ss_pred cceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcccccc
Q 002250 793 LAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDSRDS 872 (947)
Q Consensus 793 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 872 (947)
+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||... +............
T Consensus 142 ~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~-----~~~~~~~~i~~~~-- 212 (321)
T cd05603 142 LCKEGVEPE--ETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSR-----DVSQMYDNILHKP-- 212 (321)
T ss_pred CCccCCCCC--CccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCC-----CHHHHHHHHhcCC--
Confidence 987532221 1223456899999999999888999999999999999999999999532 2222221111111
Q ss_pred ccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHH
Q 002250 873 MLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMR 911 (947)
Q Consensus 873 ~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 911 (947)
...+......+.+++.+|++.||.+||++.
T Consensus 213 ---------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 213 ---------LQLPGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred ---------CCCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 111122344678899999999999999764
No 185
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=5.6e-35 Score=311.65 Aligned_cols=250 Identities=28% Similarity=0.428 Sum_probs=204.6
Q ss_pred hccCCcccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
+.|++.+.||+|+||.||+|... |+.||||.+... ....+++.+|+.++++++|+||++++
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~------------------~~~~~~~~~e~~~l~~l~~~~i~~~~ 66 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDD------------------STAAQAFLAEASVMTTLRHPNLVQLL 66 (256)
T ss_pred hhccceeeeecCCCceEEEEEec-CcEEEEEEeccc------------------hhHHHHHHHHHHHHHhcCCcceeeeE
Confidence 57888999999999999999876 789999998311 01346788999999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRI 788 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 788 (947)
+++...+..++||||+++++|.+++.......+++..+..++.|++.|++||| +.+++||||||+||+++.++.++|
T Consensus 67 ~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~Nili~~~~~~~l 143 (256)
T cd05039 67 GVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLE---EKNFVHRDLAARNVLVSEDLVAKV 143 (256)
T ss_pred EEEcCCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccchhcccceEEEeCCCCEEE
Confidence 99999999999999999999999998765557899999999999999999999 899999999999999999999999
Q ss_pred eccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhc
Q 002250 789 ADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNWVYSKM 867 (947)
Q Consensus 789 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 867 (947)
+|||.++....... ...++..|+|||++..+.++.++||||||+++|||++ |..||... ...++.....
T Consensus 144 ~d~g~~~~~~~~~~-----~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~--~~~~~~~~~~--- 213 (256)
T cd05039 144 SDFGLAKEASQGQD-----SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI--PLKDVVPHVE--- 213 (256)
T ss_pred cccccccccccccc-----cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCC--CHHHHHHHHh---
Confidence 99999986633221 2234678999999998889999999999999999998 99888432 1111211111
Q ss_pred cccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 002250 868 DSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEA 920 (947)
Q Consensus 868 ~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 920 (947)
.... ...+...+..+.+++.+|++.+|++|||+.|++++|+.+
T Consensus 214 -~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 214 -KGYR---------MEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred -cCCC---------CCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 1100 111223356788999999999999999999999999764
No 186
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=4.8e-35 Score=314.46 Aligned_cols=257 Identities=25% Similarity=0.429 Sum_probs=201.8
Q ss_pred hccCCcccccccCceeEEEEEeC-CCc---EEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcccccc
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGK---ELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNV 704 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~---~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 704 (947)
..|+..+.||+|+||.||+|+.+ +++ .+|||.+.... .....+.+..|++++++++||||
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~----------------~~~~~~~~~~e~~~l~~l~h~~i 68 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY----------------TEKQRQDFLSEASIMGQFSHHNI 68 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC----------------CHHHHHHHHHHHHHHhcCCCCCe
Confidence 46778899999999999999965 333 69999873210 11224568899999999999999
Q ss_pred ceEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCC
Q 002250 705 VKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEW 784 (947)
Q Consensus 705 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~ 784 (947)
+++.+++...+..++||||+++++|.+++.... ..+++..+..++.|++.|++||| +.+++||||||+||++++++
T Consensus 69 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nili~~~~ 144 (268)
T cd05063 69 IRLEGVVTKFKPAMIITEYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLS---DMNYVHRDLAARNILVNSNL 144 (268)
T ss_pred eEEEEEEccCCCcEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEEcCCC
Confidence 999999999999999999999999999997632 45899999999999999999999 88999999999999999999
Q ss_pred CeEEeccccceecccCCCCcce-ecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHH
Q 002250 785 KPRIADFGLAKIVQTGEAGDLT-HVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNW 862 (947)
Q Consensus 785 ~~kl~DfG~a~~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~ 862 (947)
.++++|||++............ .....+..|+|||++....++.++|||||||++|||++ |+.||.... ..+....
T Consensus 145 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~--~~~~~~~ 222 (268)
T cd05063 145 ECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMS--NHEVMKA 222 (268)
T ss_pred cEEECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCC--HHHHHHH
Confidence 9999999999765433221111 11123457999999988889999999999999999998 999985321 1112211
Q ss_pred HHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 002250 863 VYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEA 920 (947)
Q Consensus 863 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 920 (947)
. ... .. .+...+.+..+.+++.+||+.+|++||++.+|++.|+++
T Consensus 223 i---~~~-~~---------~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 223 I---NDG-FR---------LPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred H---hcC-CC---------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 1 111 00 111223456688999999999999999999999999875
No 187
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-36 Score=320.69 Aligned_cols=265 Identities=28% Similarity=0.350 Sum_probs=212.5
Q ss_pred hccCCcccccccCceeEEEEEe-CCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVL-NSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
..|...+.||.|+||.||-|+. .+.+.||||++...+.. ....-+++..|+..+++++|||+|.+
T Consensus 26 klf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQ--------------s~EKWqDIlKEVrFL~~l~HPntieY 91 (948)
T KOG0577|consen 26 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ--------------SNEKWQDILKEVRFLRQLRHPNTIEY 91 (948)
T ss_pred HHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccc--------------cHHHHHHHHHHHHHHHhccCCCcccc
Confidence 4566778899999999999994 47889999998432211 11234678899999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
.|+|-.+...|+||||| -|+-.|.+.- ...++.+..+..|+.+++.||+||| +.+.||||||+.|||+++.|.||
T Consensus 92 kgCyLre~TaWLVMEYC-lGSAsDlleV-hkKplqEvEIAAi~~gaL~gLaYLH---S~~~IHRDiKAGNILLse~g~VK 166 (948)
T KOG0577|consen 92 KGCYLREHTAWLVMEYC-LGSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLH---SHNRIHRDIKAGNILLSEPGLVK 166 (948)
T ss_pred cceeeccchHHHHHHHH-hccHHHHHHH-HhccchHHHHHHHHHHHHHHHHHHH---HhhHHhhhccccceEecCCCeee
Confidence 99999999999999999 6688888765 3457888888999999999999999 99999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccc---cCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAY---TCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVY 864 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~ 864 (947)
|+|||.|.+..+.. .++|||.|||||++. .|.|+-|+||||+|++-.|+...++|++... ...-++
T Consensus 167 LaDFGSAsi~~PAn------sFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMN-----AMSALY 235 (948)
T KOG0577|consen 167 LADFGSASIMAPAN------SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-----AMSALY 235 (948)
T ss_pred eccccchhhcCchh------cccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCch-----HHHHHH
Confidence 99999998776554 578999999999984 5789999999999999999999999975331 112122
Q ss_pred hhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCCCCcceeeecc
Q 002250 865 SKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAEPCSVTNIVVKK 932 (947)
Q Consensus 865 ~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~~~~~~~~ 932 (947)
-..+... |-+. -.+....+..++-.|+++-|.+|||..+++++---.++.|++-|+.-+
T Consensus 236 HIAQNes-------PtLq--s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~Rp~tvi~dLI 294 (948)
T KOG0577|consen 236 HIAQNES-------PTLQ--SNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRERPPTVIMDLI 294 (948)
T ss_pred HHHhcCC-------CCCC--CchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhccCCCchHHHHHH
Confidence 1111111 1111 234456677888899999999999999999987777777776655443
No 188
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=7.8e-35 Score=312.91 Aligned_cols=254 Identities=24% Similarity=0.327 Sum_probs=189.7
Q ss_pred ccccccCceeEEEEEeCC---CcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEEEE
Q 002250 635 NLIGKGGSGNVYKVVLNS---GKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYCSI 711 (947)
Q Consensus 635 ~~iG~G~~g~Vy~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 711 (947)
+.||+|+||.||+|...+ +..+|+|.+.... .......+.+|+.++++++||||+++++++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~----------------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 64 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSA----------------SVQEQMKFLEEAQPYRSLQHSNLLQCLGQC 64 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCC----------------ChHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 358999999999998653 4579999873211 012234688899999999999999999999
Q ss_pred ecCCccEEEEeccCCCChHHHhhhcC---CccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEE
Q 002250 712 TSEDSNLLVYEYLPNGSLWDRLHTCH---KIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRI 788 (947)
Q Consensus 712 ~~~~~~~lv~e~~~~gsL~~~l~~~~---~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 788 (947)
.+....++||||+++|+|.+++.... ....++..+..++.|++.|++||| +.+++||||||+||+++.++.++|
T Consensus 65 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dlkp~nil~~~~~~~kL 141 (269)
T cd05087 65 TEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLH---KNNFIHSDLALRNCLLTADLTVKI 141 (269)
T ss_pred cCCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEE
Confidence 99999999999999999999997532 235677888889999999999999 899999999999999999999999
Q ss_pred eccccceecccCCCCcceecccccccccCccccccC-------CCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHH
Q 002250 789 ADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTC-------KINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIV 860 (947)
Q Consensus 789 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~ 860 (947)
+|||.+................++..|+|||++... .++.++||||||+++|||++ |+.||.... ..+..
T Consensus 142 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~--~~~~~ 219 (269)
T cd05087 142 GDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLS--DEQVL 219 (269)
T ss_pred CCccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCC--hHHHH
Confidence 999999754433222222234577889999988542 35789999999999999997 999984321 11111
Q ss_pred HHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 002250 861 NWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLE 918 (947)
Q Consensus 861 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~ 918 (947)
... .... .....++.+.. .....+.+++..|| .+|++|||+.||++.|+
T Consensus 220 ~~~---~~~~--~~~~~~~~~~~---~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 220 TYT---VREQ--QLKLPKPRLKL---PLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred HHH---hhcc--cCCCCCCccCC---CCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 111 1110 01111222211 12334677888999 58999999999999875
No 189
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=2.6e-35 Score=322.05 Aligned_cols=258 Identities=24% Similarity=0.356 Sum_probs=199.1
Q ss_pred hccCCcccccccCceeEEEEEeC-CCc--EEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-ccccc
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGK--ELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-RHVNV 704 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~--~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~ni 704 (947)
++|++.+.||+|+||.||+|..+ ++. .+|+|.+... ........+.+|++++.++ +||||
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~----------------~~~~~~~~~~~Ei~~l~~l~~h~~i 70 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY----------------ASKDDHRDFAGELEVLCKLGHHPNI 70 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc----------------CCHHHHHHHHHHHHHHHHhcCCCCc
Confidence 57888899999999999999965 454 4577766210 0112345788899999999 89999
Q ss_pred ceEEEEEecCCccEEEEeccCCCChHHHhhhcC--------------CccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEe
Q 002250 705 VKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCH--------------KIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIH 770 (947)
Q Consensus 705 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~--------------~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH 770 (947)
+++++++..++..++||||+++++|.++++... ...+++..++.++.|++.|++||| +.+++|
T Consensus 71 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H 147 (303)
T cd05088 71 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIH 147 (303)
T ss_pred ceEEEEECCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHH---hCCccc
Confidence 999999999999999999999999999997542 135788999999999999999999 899999
Q ss_pred ccCCCCCeEecCCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCC
Q 002250 771 RDVKSSNILLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPI 849 (947)
Q Consensus 771 ~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~ 849 (947)
|||||+||+++.++.+||+|||++....... ......++..|+|||++....++.++|||||||++|||+| |..||
T Consensus 148 ~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~ 224 (303)
T cd05088 148 RDLAARNILVGENYVAKIADFGLSRGQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPY 224 (303)
T ss_pred cccchheEEecCCCcEEeCccccCcccchhh---hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCc
Confidence 9999999999999999999999986322111 1111234678999999988889999999999999999998 99998
Q ss_pred CCCCCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCCC
Q 002250 850 VPEFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAEPC 923 (947)
Q Consensus 850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 923 (947)
.... ..+.... ...... .+.+...+..+.+++.+|++.+|++||++.+++++++++...
T Consensus 225 ~~~~--~~~~~~~----~~~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~ 283 (303)
T cd05088 225 CGMT--CAELYEK----LPQGYR---------LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 283 (303)
T ss_pred ccCC--hHHHHHH----HhcCCc---------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 4321 1111111 111000 011112345678999999999999999999999999875433
No 190
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=5.1e-35 Score=322.72 Aligned_cols=244 Identities=25% Similarity=0.270 Sum_probs=192.1
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-cccccceE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-RHVNVVKL 707 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l 707 (947)
+|++.+.||+|+||.||+|+.. +++.||||++.... .........+..|..++..+ .|++|+++
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~--------------~~~~~~~~~~~~e~~~l~~~~~~~~i~~~ 66 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDV--------------VIQDDDVECTMVEKRVLALSGKPPFLTQL 66 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHH--------------hhhhhHHHHHHHHHHHHHhccCCCeEeeE
Confidence 3678899999999999999966 67899999984211 11112334566788888877 58999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
++++...+..++||||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+|
T Consensus 67 ~~~~~~~~~~~lv~E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~k 141 (323)
T cd05616 67 HSCFQTMDRLYFVMEYVNGGDLMYQIQQV--GRFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIK 141 (323)
T ss_pred EEEEecCCEEEEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCEEecCCCHHHeEECCCCcEE
Confidence 99999999999999999999999998764 34788899999999999999999 89999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKM 867 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 867 (947)
|+|||+++....... ......||+.|+|||++....++.++|||||||++|||++|+.||.... .........
T Consensus 142 L~DfG~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~-----~~~~~~~i~ 214 (323)
T cd05616 142 IADFGMCKENMWDGV--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED-----EDELFQSIM 214 (323)
T ss_pred EccCCCceecCCCCC--ccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCC-----HHHHHHHHH
Confidence 999999975432221 1224568999999999999999999999999999999999999995321 111111111
Q ss_pred cccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCH
Q 002250 868 DSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSM 910 (947)
Q Consensus 868 ~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~ 910 (947)
.... ..+......+.+++.+|++.||++|++.
T Consensus 215 ~~~~-----------~~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 215 EHNV-----------AYPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred hCCC-----------CCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 1111 1122234567889999999999999984
No 191
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6e-35 Score=323.95 Aligned_cols=259 Identities=24% Similarity=0.330 Sum_probs=203.0
Q ss_pred hccCCcccccccCceeEEEEEeC--------CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN--------SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV- 699 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l- 699 (947)
.+|++.+.||+|+||.||+|... .+..||+|.+... ........+.+|+.+++++
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~----------------~~~~~~~~~~~E~~~l~~l~ 75 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD----------------ATDKDLSDLVSEMEMMKMIG 75 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc----------------cCHHHHHHHHHHHHHHHhhc
Confidence 46889999999999999999742 1236899987311 1112345788999999999
Q ss_pred cccccceEEEEEecCCccEEEEeccCCCChHHHhhhcC--------------CccCCHHHHHHHHHHHHHHHHHHhcCCC
Q 002250 700 RHVNVVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCH--------------KIEMDWVVRYAIAVGAAKGLEYLHHGFD 765 (947)
Q Consensus 700 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~--------------~~~~~~~~~~~i~~~ia~~l~yLH~~~~ 765 (947)
+||||+++++++..++..++||||+++|+|.+++.... ...+++..+..++.|++.||+||| +
T Consensus 76 ~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~ 152 (334)
T cd05100 76 KHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLA---S 152 (334)
T ss_pred CCCCeeeeeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---H
Confidence 89999999999999999999999999999999997532 235788999999999999999999 8
Q ss_pred CCeEeccCCCCCeEecCCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-
Q 002250 766 RPVIHRDVKSSNILLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT- 844 (947)
Q Consensus 766 ~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt- 844 (947)
.+++||||||+||+++.++.+||+|||+++...............++..|+|||++....++.++||||||+++|||++
T Consensus 153 ~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~ 232 (334)
T cd05100 153 QKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTL 232 (334)
T ss_pred CCeeccccccceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhc
Confidence 9999999999999999999999999999986544322222222234568999999999889999999999999999999
Q ss_pred CCCCCCCCCCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccC
Q 002250 845 GKRPIVPEFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAE 921 (947)
Q Consensus 845 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~ 921 (947)
|..||... ...+........ ...+.+...+..+.+++.+|++.+|++||++.|+++.|+++.
T Consensus 233 g~~p~~~~-----~~~~~~~~~~~~----------~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~ 294 (334)
T cd05100 233 GGSPYPGI-----PVEELFKLLKEG----------HRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVL 294 (334)
T ss_pred CCCCCCCC-----CHHHHHHHHHcC----------CCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHh
Confidence 88887422 222222111111 111122233457889999999999999999999999999866
No 192
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=5e-35 Score=317.88 Aligned_cols=263 Identities=23% Similarity=0.259 Sum_probs=194.3
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc---cccccc
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV---RHVNVV 705 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv 705 (947)
+|++.+.||+|+||+||+|+.. +++.||+|.+..... .......+.+|+.+++.+ +||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~---------------~~~~~~~~~~e~~~l~~l~~~~h~ni~ 65 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTN---------------EDGLPLSTVREVALLKRLEAFDHPNIV 65 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcC---------------CCCCchHHHHHHHHHHHhhhcCCCCee
Confidence 4778899999999999999965 689999998842210 111223455677777665 699999
Q ss_pred eEEEEEecC-----CccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEe
Q 002250 706 KLYCSITSE-----DSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILL 780 (947)
Q Consensus 706 ~l~~~~~~~-----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll 780 (947)
++++++... ...++||||++ ++|.+++.......+++..+..++.|++.||+||| +.+|+||||||+||++
T Consensus 66 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili 141 (288)
T cd07863 66 RLMDVCATSRTDRETKVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILV 141 (288)
T ss_pred eeeeeeccccCCCCceEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEE
Confidence 999988642 34689999997 58999988765566899999999999999999999 8999999999999999
Q ss_pred cCCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHH
Q 002250 781 DLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIV 860 (947)
Q Consensus 781 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~ 860 (947)
+.++.+||+|||+++....... .....||..|+|||++.+..++.++||||+||++|||++|++||..... ...+.
T Consensus 142 ~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~-~~~~~ 217 (288)
T cd07863 142 TSGGQVKLADFGLARIYSCQMA---LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE-ADQLG 217 (288)
T ss_pred CCCCCEEECccCccccccCccc---CCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCH-HHHHH
Confidence 9999999999999986543221 1234678999999999988899999999999999999999999853311 11111
Q ss_pred HHHHhhcc-cccccc-------ccccCC----CCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 861 NWVYSKMD-SRDSML-------TVVDPN----ISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 861 ~~~~~~~~-~~~~~~-------~~~d~~----~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
........ ....+. ....+. ......+....+.+++.+|++.||++|||+.|+++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 218 KIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred HHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 11110000 000000 000000 11122234456789999999999999999999985
No 193
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=6.5e-35 Score=323.08 Aligned_cols=258 Identities=21% Similarity=0.265 Sum_probs=196.9
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
++|++.+.||+|+||+||+++.+ +++.+|+|++... ..........+..|+.++..++|++|+++
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~--------------~~~~~~~~~~~~~e~~~l~~~~~~~i~~~ 66 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKW--------------EMLKRAETACFREERDVLVNGDNQWITTL 66 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHH--------------HHHHhhHHHHHHHHHHHHhhCCCCCEeeE
Confidence 36888999999999999999966 5788999988310 01112234568889999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
++++..++..++||||+++|+|.+++.+. ...+++.....++.|++.|++||| +.+|+||||||+||+++.++.+|
T Consensus 67 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~l~~~~~~~~~~qi~~al~~lH---~~~iiHrDlkp~Nili~~~~~~k 142 (332)
T cd05623 67 HYAFQDENNLYLVMDYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIR 142 (332)
T ss_pred EEEEecCCEEEEEEeccCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEE
Confidence 99999999999999999999999999863 235788888999999999999999 89999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccc-----cCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHH
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAY-----TCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNW 862 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~ 862 (947)
|+|||++......... ......||+.|+|||++. ...++.++|||||||++|||++|+.||... +..+.
T Consensus 143 L~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~-----~~~~~ 216 (332)
T cd05623 143 LADFGSCLKLMEDGTV-QSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAE-----SLVET 216 (332)
T ss_pred EeecchheecccCCcc-eecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCC-----CHHHH
Confidence 9999999755332221 122356999999999986 345788999999999999999999999532 22222
Q ss_pred HHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCC--CCCHHHHHHH
Q 002250 863 VYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAF--RPSMRVVVQM 916 (947)
Q Consensus 863 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPt~~ev~~~ 916 (947)
.......... ..++.........+.+++.+|+..+|.+ |+++.|++++
T Consensus 217 ~~~i~~~~~~------~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 217 YGKIMNHKER------FQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred HHHHhCCCcc------ccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 2222211111 0112222233456777777877655444 7899999877
No 194
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=5.2e-35 Score=329.93 Aligned_cols=256 Identities=23% Similarity=0.295 Sum_probs=194.4
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
++|++.+.||+|+||+||+|... +++.||||++.... .........+.+|++++++++||||+++
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~--------------~~~~~~~~~~~~E~~il~~l~hp~iv~~ 66 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSE--------------MFKKDQLAHVKAERDVLAESDSPWVVSL 66 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHH--------------HHHhHHHHHHHHHHHHHHhCCCCCcceE
Confidence 36888999999999999999854 78999999883110 0111234568899999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
++++.+++..|+||||+++|+|.+++... ..+++.....++.|++.||+||| +.+|+||||||+||+++.++.+|
T Consensus 67 ~~~~~~~~~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH---~~givHrDlkp~NIll~~~~~~k 141 (377)
T cd05629 67 YYSFQDAQYLYLIMEFLPGGDLMTMLIKY--DTFSEDVTRFYMAECVLAIEAVH---KLGFIHRDIKPDNILIDRGGHIK 141 (377)
T ss_pred EEEEEcCCeeEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEE
Confidence 99999999999999999999999999764 35788888889999999999999 89999999999999999999999
Q ss_pred EeccccceecccCCCC------------c---------------------------------ceecccccccccCccccc
Q 002250 788 IADFGLAKIVQTGEAG------------D---------------------------------LTHVIAGTHGYIAPEYAY 822 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~------------~---------------------------------~~~~~~gt~~y~aPE~~~ 822 (947)
|+|||+++........ . .....+||+.|+|||++.
T Consensus 142 l~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 221 (377)
T cd05629 142 LSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFL 221 (377)
T ss_pred EeecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHc
Confidence 9999998633211000 0 001246999999999999
Q ss_pred cCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCC
Q 002250 823 TCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNK 902 (947)
Q Consensus 823 ~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~ 902 (947)
+..++.++|||||||++|||++|+.||.... ..+...........+ .++. .......+.+++.+|+.
T Consensus 222 ~~~~~~~~DiwSlGvil~elltG~~Pf~~~~-----~~~~~~~i~~~~~~~------~~p~-~~~~s~~~~dli~~lL~- 288 (377)
T cd05629 222 QQGYGQECDWWSLGAIMFECLIGWPPFCSEN-----SHETYRKIINWRETL------YFPD-DIHLSVEAEDLIRRLIT- 288 (377)
T ss_pred cCCCCCceeeEecchhhhhhhcCCCCCCCCC-----HHHHHHHHHccCCcc------CCCC-CCCCCHHHHHHHHHHhc-
Confidence 8889999999999999999999999995321 111111111111110 0011 01123457788889997
Q ss_pred CCCCC---CCHHHHHHH
Q 002250 903 LPAFR---PSMRVVVQM 916 (947)
Q Consensus 903 dP~~R---Pt~~ev~~~ 916 (947)
+|.+| +++.|++++
T Consensus 289 ~~~~r~~r~~~~~~l~h 305 (377)
T cd05629 289 NAENRLGRGGAHEIKSH 305 (377)
T ss_pred CHhhcCCCCCHHHHhcC
Confidence 66664 699998875
No 195
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=7.6e-35 Score=322.22 Aligned_cols=258 Identities=20% Similarity=0.269 Sum_probs=194.8
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
++|++.+.||+|+||+||+|+.. +++.||||++... ..........+.+|+.++..++|+||+++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~--------------~~~~~~~~~~~~~e~~~l~~~~~~~i~~~ 66 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKW--------------EMLKRAETACFREERDVLVNGDRRWITNL 66 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHH--------------HHhhhhhHHHHHHHHHHHHhCCCCCCCce
Confidence 36888999999999999999965 6899999998311 01112334568899999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
++++..++..|+||||+++|+|.+++.+. ...+++..+..++.|++.||+||| +++|+||||||+||+++.++.+|
T Consensus 67 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~k 142 (331)
T cd05597 67 HYAFQDENNLYLVMDYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVLAIDSVH---QLGYVHRDIKPDNVLLDKNGHIR 142 (331)
T ss_pred EEEEecCCeEEEEEecCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEECCCCHHHEEECCCCCEE
Confidence 99999999999999999999999999763 345788888999999999999999 89999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCcccccc-----CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHH
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYT-----CKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNW 862 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~ 862 (947)
|+|||++......... ......||+.|+|||++.. ..++.++||||+||++|||++|+.||... ...+.
T Consensus 143 l~Dfg~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~-----~~~~~ 216 (331)
T cd05597 143 LADFGSCLRLLADGTV-QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAE-----SLVET 216 (331)
T ss_pred EEECCceeecCCCCCc-cccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCC-----CHHHH
Confidence 9999998765433221 1223468999999999863 45788999999999999999999998432 22222
Q ss_pred HHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCC--CCCCCCHHHHHHH
Q 002250 863 VYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKL--PAFRPSMRVVVQM 916 (947)
Q Consensus 863 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~d--P~~RPt~~ev~~~ 916 (947)
.......... . .++......+..+.+++.+|+..+ +..||++.+++++
T Consensus 217 ~~~i~~~~~~-~-----~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 217 YGKIMNHKEH-F-----QFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred HHHHHcCCCc-c-----cCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 2222111111 0 111111123345566666766543 3448899998876
No 196
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=1.2e-34 Score=324.83 Aligned_cols=257 Identities=22% Similarity=0.291 Sum_probs=196.7
Q ss_pred hhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccce
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVK 706 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 706 (947)
.++|++.+.||+|+||.||+|+.+ +++.||+|++... ..........+.+|+.+++.++||||++
T Consensus 42 ~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~--------------~~~~~~~~~~~~~e~~i~~~~~hp~iv~ 107 (371)
T cd05622 42 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKF--------------EMIKRSDSAFFWEERDIMAFANSPWVVQ 107 (371)
T ss_pred hhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHH--------------HhhhhHHHHHHHHHHHHHHhCCCCCCCe
Confidence 478999999999999999999966 6889999988311 0111123456788999999999999999
Q ss_pred EEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCe
Q 002250 707 LYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKP 786 (947)
Q Consensus 707 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 786 (947)
+++++..+...++||||+++|+|.+++... .++......++.|++.||+||| +.+|+||||||+||+++.++.+
T Consensus 108 ~~~~~~~~~~~~lv~Ey~~gg~L~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NIll~~~~~i 181 (371)
T cd05622 108 LFYAFQDDRYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHL 181 (371)
T ss_pred EEEEEEcCCEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHEEECCCCCE
Confidence 999999999999999999999999999752 4678888889999999999999 8999999999999999999999
Q ss_pred EEeccccceecccCCCCcceecccccccccCccccccC----CCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHH
Q 002250 787 RIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTC----KINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNW 862 (947)
Q Consensus 787 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~ 862 (947)
||+|||+++........ ......||+.|+|||++... .++.++|||||||++|||++|+.||... +....
T Consensus 182 kL~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~-----~~~~~ 255 (371)
T cd05622 182 KLADFGTCMKMNKEGMV-RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD-----SLVGT 255 (371)
T ss_pred EEEeCCceeEcCcCCcc-cccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCC-----CHHHH
Confidence 99999999866433221 12245799999999998653 3788999999999999999999999532 22222
Q ss_pred HHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCC--CCCHHHHHHHh
Q 002250 863 VYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAF--RPSMRVVVQML 917 (947)
Q Consensus 863 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPt~~ev~~~L 917 (947)
........... .++. .......+.+++.+|+..++.+ ||++.|++++.
T Consensus 256 ~~~i~~~~~~~------~~~~-~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 256 YSKIMNHKNSL------TFPD-DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred HHHHHcCCCcc------cCCC-cCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 22211111110 0111 1123445777888999844443 78999988764
No 197
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=4.7e-35 Score=314.70 Aligned_cols=251 Identities=24% Similarity=0.365 Sum_probs=196.1
Q ss_pred ccccccCceeEEEEEeCC-------CcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 635 NLIGKGGSGNVYKVVLNS-------GKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 635 ~~iG~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
+.||+|+||.||+|+..+ ++.+|||.+... ........+.+|+.+++.++||||+++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~----------------~~~~~~~~~~~e~~~l~~l~h~~i~~~ 64 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKG----------------ATDQEKKEFLKEAHLMSNFNHPNIVKL 64 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcc----------------cchhhHHHHHHHHHHHHhcCCCCeeeE
Confidence 368999999999998652 257899976311 111234578899999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcC-----CccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecC
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCH-----KIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDL 782 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-----~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~ 782 (947)
++++...+..++||||+++++|.+++.... ...+++..+..++.|++.|++||| +.+++|+||||+||+++.
T Consensus 65 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~ 141 (269)
T cd05044 65 LGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLE---QMHFIHRDLAARNCLVSE 141 (269)
T ss_pred eeeecCCCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHH---hCCcccCCCChheEEEec
Confidence 999999999999999999999999997532 234788999999999999999999 889999999999999998
Q ss_pred CC-----CeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCc
Q 002250 783 EW-----KPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDS 856 (947)
Q Consensus 783 ~~-----~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~ 856 (947)
++ .++++|||+++...............++..|+|||++.++.++.++|||||||++|||++ |+.||.... .
T Consensus 142 ~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~--~ 219 (269)
T cd05044 142 KGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALN--N 219 (269)
T ss_pred CCCCCCcceEECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccC--H
Confidence 77 899999999976543332222222345688999999999999999999999999999998 999984221 1
Q ss_pred ccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhc
Q 002250 857 KDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEE 919 (947)
Q Consensus 857 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~ 919 (947)
.+.... .... .........+..+.+++.+||..+|.+||++.++.++|++
T Consensus 220 ~~~~~~----~~~~---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 220 QEVLQH----VTAG---------GRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred HHHHHH----HhcC---------CccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 111111 1111 0111223345678899999999999999999999999874
No 198
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=5.6e-35 Score=316.46 Aligned_cols=253 Identities=26% Similarity=0.277 Sum_probs=199.2
Q ss_pred cCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEE
Q 002250 631 VKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYC 709 (947)
Q Consensus 631 ~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 709 (947)
|+..+.||+|+||.||+|... +++.||||.+.... .........+..|+.++++++|++|+++++
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~--------------~~~~~~~~~~~~E~~il~~l~~~~i~~~~~ 67 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKR--------------IKKRKGESMALNEKQILEKVNSRFVVSLAY 67 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhh--------------ccchHHHHHHHHHHHHHHhCCCCCeeeeeE
Confidence 567788999999999999965 78999999884211 011122345678999999999999999999
Q ss_pred EEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEe
Q 002250 710 SITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIA 789 (947)
Q Consensus 710 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 789 (947)
.+..++..++||||+++++|.+++.......+++..+..++.|++.|++||| +.+|+||||||+||+++.++.++|+
T Consensus 68 ~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nil~~~~~~~~l~ 144 (285)
T cd05630 68 AYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLH---QERIVYRDLKPENILLDDHGHIRIS 144 (285)
T ss_pred EEecCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEe
Confidence 9999999999999999999999997655567899999999999999999999 8999999999999999999999999
Q ss_pred ccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhccc
Q 002250 790 DFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDS 869 (947)
Q Consensus 790 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 869 (947)
|||++........ .....|+..|+|||++.+..++.++||||+|+++|||++|+.||....... ..+........
T Consensus 145 Dfg~~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~--~~~~~~~~~~~ 219 (285)
T cd05630 145 DLGLAVHVPEGQT---IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI--KREEVERLVKE 219 (285)
T ss_pred eccceeecCCCcc---ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccc--hHHHHHhhhhh
Confidence 9999976543321 123468999999999998889999999999999999999999996432110 00111111000
Q ss_pred cccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHH
Q 002250 870 RDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPS-----MRVVVQ 915 (947)
Q Consensus 870 ~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~ev~~ 915 (947)
. ...........+.+++.+|++.||++||| +.|+++
T Consensus 220 ~----------~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 220 V----------QEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred h----------hhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 0 00112223455788999999999999999 788876
No 199
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=8.2e-35 Score=311.32 Aligned_cols=250 Identities=28% Similarity=0.401 Sum_probs=202.4
Q ss_pred ccccccCceeEEEEEeCC----CcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEEE
Q 002250 635 NLIGKGGSGNVYKVVLNS----GKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYCS 710 (947)
Q Consensus 635 ~~iG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 710 (947)
+.||+|+||.||+|.... +..||+|+++.... ......+.+|+++++.++|+||++++++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~----------------~~~~~~~~~e~~~l~~~~~~~i~~~~~~ 64 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDAS----------------EEERKDFLKEARVMKKLGHPNVVRLLGV 64 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccc----------------hhHHHHHHHHHHHHhhcCCCChheeeee
Confidence 468999999999999653 78999999842211 1135678899999999999999999999
Q ss_pred EecCCccEEEEeccCCCChHHHhhhcC-------CccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCC
Q 002250 711 ITSEDSNLLVYEYLPNGSLWDRLHTCH-------KIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLE 783 (947)
Q Consensus 711 ~~~~~~~~lv~e~~~~gsL~~~l~~~~-------~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~ 783 (947)
+..+...++||||+++++|.+++.... ...+++..+..++.|++.|++||| +.+++||||+|+||+++.+
T Consensus 65 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~nili~~~ 141 (262)
T cd00192 65 CTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLA---SKKFVHRDLAARNCLVGED 141 (262)
T ss_pred ecCCCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHH---cCCcccCccCcceEEECCC
Confidence 999999999999999999999998742 356899999999999999999999 8999999999999999999
Q ss_pred CCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHH
Q 002250 784 WKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNW 862 (947)
Q Consensus 784 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~ 862 (947)
+.++|+|||.+................++..|+|||.+....++.++||||+|+++|||++ |..||... ....+.+.
T Consensus 142 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~--~~~~~~~~ 219 (262)
T cd00192 142 LVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGL--SNEEVLEY 219 (262)
T ss_pred CcEEEcccccccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCC--CHHHHHHH
Confidence 9999999999987655432222334457889999999988889999999999999999999 68888533 11112111
Q ss_pred HHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 002250 863 VYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLE 918 (947)
Q Consensus 863 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~ 918 (947)
. .. ......+...+..+.+++.+|++.+|++|||+.|++++|+
T Consensus 220 ~---~~----------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 220 L---RK----------GYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred H---Hc----------CCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 1 11 1111222333567889999999999999999999999874
No 200
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=5.1e-35 Score=315.01 Aligned_cols=252 Identities=24% Similarity=0.333 Sum_probs=197.0
Q ss_pred HhhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-ccccc
Q 002250 627 IIDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-RHVNV 704 (947)
Q Consensus 627 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~ni 704 (947)
..+.|+..+.||+|+||.||+|... +++.||+|++... ......+.+|+.+++++ +||||
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~------------------~~~~~~~~~e~~~l~~~~~h~~i 65 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT------------------GDEEEEIKQEINMLKKYSHHRNI 65 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcC------------------CccHHHHHHHHHHHHHhcCCCCe
Confidence 3467888899999999999999965 6889999987311 12345678899999998 69999
Q ss_pred ceEEEEEecC------CccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCe
Q 002250 705 VKLYCSITSE------DSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNI 778 (947)
Q Consensus 705 v~l~~~~~~~------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NI 778 (947)
+++++++... ...++||||+++++|.+++.......+++.....++.|++.|++||| +.+|+||||||+||
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH---~~~ivh~dl~~~ni 142 (272)
T cd06637 66 ATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNV 142 (272)
T ss_pred eeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHE
Confidence 9999998753 34789999999999999998755567899999999999999999999 88999999999999
Q ss_pred EecCCCCeEEeccccceecccCCCCcceecccccccccCccccc-----cCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 002250 779 LLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAY-----TCKINEKSDVYSFGVVLMELVTGKRPIVPEF 853 (947)
Q Consensus 779 ll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slGv~l~elltg~~p~~~~~ 853 (947)
++++++.++|+|||++........ ......|+..|+|||++. ...++.++|||||||++|||++|+.||....
T Consensus 143 li~~~~~~~l~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~ 220 (272)
T cd06637 143 LLTENAEVKLVDFGVSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH 220 (272)
T ss_pred EECCCCCEEEccCCCceecccccc--cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccC
Confidence 999999999999999976543221 122456899999999986 3457889999999999999999999984321
Q ss_pred CCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 854 GDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
....... ..... .... .....+..+.+++.+||..+|.+|||+.++++
T Consensus 221 ----~~~~~~~-~~~~~-------~~~~--~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 221 ----PMRALFL-IPRNP-------APRL--KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred ----HHHHHHH-HhcCC-------CCCC--CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 1111110 00000 0000 11123346789999999999999999999976
No 201
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=5.5e-35 Score=312.87 Aligned_cols=252 Identities=28% Similarity=0.346 Sum_probs=190.7
Q ss_pred ccccccCceeEEEEEeC----CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEEE
Q 002250 635 NLIGKGGSGNVYKVVLN----SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYCS 710 (947)
Q Consensus 635 ~~iG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 710 (947)
+.||+|+||.||+|... ++..||+|++... ........+.+|+.+++.++||||++++++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~----------------~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~ 64 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI----------------TDLEEVEQFLKEGIIMKDFSHPNVLSLLGI 64 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCcc----------------CCHHHHHHHHHHHHHHccCCCCCcceEEEE
Confidence 46899999999999853 2457999987210 111234578889999999999999999997
Q ss_pred Ee-cCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEe
Q 002250 711 IT-SEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIA 789 (947)
Q Consensus 711 ~~-~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 789 (947)
+. .++..++||||+++|+|.+++.... ...++.....++.|++.|++||| +.+++||||||+||++++++.+||+
T Consensus 65 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlk~~nili~~~~~~kl~ 140 (262)
T cd05058 65 CLPSEGSPLVVLPYMKHGDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLA---SKKFVHRDLAARNCMLDESFTVKVA 140 (262)
T ss_pred eecCCCCcEEEEecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEEC
Confidence 75 4556789999999999999997643 34677788889999999999999 8899999999999999999999999
Q ss_pred ccccceecccCCCC--cceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCC-CCCCCCCCcccHHHHHHhh
Q 002250 790 DFGLAKIVQTGEAG--DLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKR-PIVPEFGDSKDIVNWVYSK 866 (947)
Q Consensus 790 DfG~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~-p~~~~~~~~~~~~~~~~~~ 866 (947)
|||+++........ .......++..|+|||++....++.++||||||+++|||++|+. ||... ...+.... .
T Consensus 141 dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~--~~~~~~~~---~ 215 (262)
T cd05058 141 DFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV--DSFDITVY---L 215 (262)
T ss_pred CccccccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCC--CHHHHHHH---H
Confidence 99999754332110 11112345778999999988889999999999999999999654 44221 11112111 1
Q ss_pred ccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccC
Q 002250 867 MDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAE 921 (947)
Q Consensus 867 ~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~ 921 (947)
.... ....+...+..+.+++.+||+.+|++||++.|+++.|+++.
T Consensus 216 ~~~~----------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 216 LQGR----------RLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred hcCC----------CCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 1111 11111223456889999999999999999999999998753
No 202
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.5e-35 Score=314.77 Aligned_cols=251 Identities=27% Similarity=0.423 Sum_probs=202.6
Q ss_pred hccCCcccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-cccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-RHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l 707 (947)
..|++.+.||+||.+.||++...+.+.+|+|++. ...........|..|+..|.++ .|.+||++
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~---------------~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL 425 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVV---------------LLEADNQTLDGYRNEIALLNKLKGHDKIIQL 425 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcchhhhHHH---------------HhhcCHHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 4588899999999999999999888889998772 2223334567899999999999 59999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
++|-..++..||||||= ..+|..++++......+| .++.+..|++.|+.++| ..+|||.||||.|+|+= .|.+|
T Consensus 426 ~DYEv~d~~lYmvmE~G-d~DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH---~~gIVHSDLKPANFLlV-kG~LK 499 (677)
T KOG0596|consen 426 YDYEVTDGYLYMVMECG-DIDLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIH---QHGIVHSDLKPANFLLV-KGRLK 499 (677)
T ss_pred eeeeccCceEEEEeecc-cccHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHH---HhceeecCCCcccEEEE-eeeEE
Confidence 99999999999999987 569999999876666667 56678889999999999 89999999999999884 57999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccccCC-----------CCCccchHHHHHHHHHHHhCCCCCCCCCCCc
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCK-----------INEKSDVYSFGVVLMELVTGKRPIVPEFGDS 856 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-----------~~~~~Dv~slGv~l~elltg~~p~~~~~~~~ 856 (947)
|+|||+|.....+.........+||+.||+||.+.... .+.++||||+||++|+|+.|+.||..
T Consensus 500 LIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~----- 574 (677)
T KOG0596|consen 500 LIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQ----- 574 (677)
T ss_pred eeeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHH-----
Confidence 99999999888777666677789999999999985332 45789999999999999999999832
Q ss_pred ccHHHHHHhhccccccccccccCC----CCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 857 KDIVNWVYSKMDSRDSMLTVVDPN----ISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 857 ~~~~~~~~~~~~~~~~~~~~~d~~----~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
+... +.+ +..+.||. +++.++.. +++++|..|+..||.+|||..|++++
T Consensus 575 --~~n~-~aK------l~aI~~P~~~Iefp~~~~~~--~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 575 --IINQ-IAK------LHAITDPNHEIEFPDIPEND--ELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred --HHHH-HHH------HHhhcCCCccccccCCCCch--HHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 1111 111 12333331 23333222 28999999999999999999999864
No 203
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=3.3e-34 Score=305.71 Aligned_cols=252 Identities=24% Similarity=0.361 Sum_probs=200.7
Q ss_pred hccCCcccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
.+|++.+.||+|+||.||+|...+++.+|+|.+... ......+.+|++++++++|||+++++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~------------------~~~~~~~~~e~~~l~~l~~~~i~~~~ 65 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREG------------------AMSEEDFIEEAQVMMKLSHPKLVQLY 65 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCC------------------CCCHHHHHHHHHHHHhCCCCCeeeEE
Confidence 467788999999999999999877889999987311 12345688999999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRI 788 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 788 (947)
+++......++||||+++++|.+++.... ..+++..+..++.+++.|++||| +.+++||||||+||+++.++.++|
T Consensus 66 ~~~~~~~~~~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~dl~p~ni~i~~~~~~~l 141 (256)
T cd05112 66 GVCTERSPICLVFEFMEHGCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLE---SSNVIHRDLAARNCLVGENQVVKV 141 (256)
T ss_pred EEEccCCceEEEEEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHH---HCCccccccccceEEEcCCCeEEE
Confidence 99999999999999999999999997632 35789999999999999999999 889999999999999999999999
Q ss_pred eccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhc
Q 002250 789 ADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNWVYSKM 867 (947)
Q Consensus 789 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 867 (947)
+|||.+......... ......++.+|+|||++.++.++.++||||||+++|||++ |..||... ...+......
T Consensus 142 ~d~g~~~~~~~~~~~-~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~-----~~~~~~~~~~ 215 (256)
T cd05112 142 SDFGMTRFVLDDQYT-SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENR-----SNSEVVETIN 215 (256)
T ss_pred CCCcceeecccCccc-ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcC-----CHHHHHHHHh
Confidence 999998765433211 1112234678999999988889999999999999999998 89998432 1112221111
Q ss_pred cccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 002250 868 DSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLE 918 (947)
Q Consensus 868 ~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~ 918 (947)
.... ...+. ..+..+.+++.+||+.+|++|||+.|++++|+
T Consensus 216 ~~~~----~~~~~------~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 216 AGFR----LYKPR------LASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred CCCC----CCCCC------CCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 1100 01111 12356889999999999999999999999874
No 204
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.6e-34 Score=308.26 Aligned_cols=251 Identities=27% Similarity=0.399 Sum_probs=198.0
Q ss_pred ccccccCceeEEEEEeCC--C--cEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEEE
Q 002250 635 NLIGKGGSGNVYKVVLNS--G--KELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYCS 710 (947)
Q Consensus 635 ~~iG~G~~g~Vy~~~~~~--~--~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 710 (947)
+.||+|++|.||+|.+.+ + ..||||.+..... ....+.+.+|+.++++++||||++++++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~----------------~~~~~~~~~e~~~l~~l~h~~iv~~~~~ 64 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKL----------------SDIMDDFLKEAAIMHSLDHENLIRLYGV 64 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCccc----------------HHHHHHHHHHHHHHhhcCCCCccceeEE
Confidence 468999999999999643 3 3699998842210 0334678899999999999999999999
Q ss_pred EecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEec
Q 002250 711 ITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIAD 790 (947)
Q Consensus 711 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 790 (947)
+.. ...++||||+++++|.+++.......+++.....++.|++.||+||| +.+++||||+|+||+++.++.+||+|
T Consensus 65 ~~~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~di~p~nil~~~~~~~kl~d 140 (257)
T cd05040 65 VLT-HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLE---SKRFIHRDLAARNILLASDDKVKIGD 140 (257)
T ss_pred EcC-CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHH---hCCccccccCcccEEEecCCEEEecc
Confidence 988 88899999999999999998754356899999999999999999999 89999999999999999999999999
Q ss_pred cccceecccCCCC-cceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhcc
Q 002250 791 FGLAKIVQTGEAG-DLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNWVYSKMD 868 (947)
Q Consensus 791 fG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 868 (947)
||+++........ .......++..|+|||++....++.++||||||+++|||++ |+.||... ...+... ....
T Consensus 141 fg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~--~~~~~~~---~~~~ 215 (257)
T cd05040 141 FGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGL--SGSQILK---KIDK 215 (257)
T ss_pred ccccccccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCC--CHHHHHH---HHHh
Confidence 9999876543221 11123456789999999998889999999999999999999 99998432 1111211 1111
Q ss_pred ccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhc
Q 002250 869 SRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEE 919 (947)
Q Consensus 869 ~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~ 919 (947)
.... ...+...+..+.+++.+|++.+|++||++.++++.|.+
T Consensus 216 ~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 257 (257)
T cd05040 216 EGER---------LERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLPE 257 (257)
T ss_pred cCCc---------CCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhcC
Confidence 1110 11122345678899999999999999999999998753
No 205
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=7.7e-35 Score=329.49 Aligned_cols=261 Identities=20% Similarity=0.233 Sum_probs=198.2
Q ss_pred hhccCCcccccccCceeEEEEEeC---CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcccccc
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLN---SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNV 704 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 704 (947)
..+|++.+.||+|+||.||+|... .++.||||.+. ......+|++++++++||||
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~----------------------~~~~~~~E~~il~~l~h~~i 148 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVT----------------------GGKTPGREIDILKTISHRAI 148 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecc----------------------ccccHHHHHHHHHhcCCCCc
Confidence 357889999999999999999754 36789999872 11235689999999999999
Q ss_pred ceEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCC
Q 002250 705 VKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEW 784 (947)
Q Consensus 705 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~ 784 (947)
+++++++......++|||++. ++|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++
T Consensus 149 v~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~--~~~l~~~~~~~i~~ql~~aL~~LH---~~givHrDlkp~Nill~~~~ 222 (392)
T PHA03207 149 INLIHAYRWKSTVCMVMPKYK-CDLFTYVDR--SGPLPLEQAITIQRRLLEALAYLH---GRGIIHRDVKTENIFLDEPE 222 (392)
T ss_pred cceeeeEeeCCEEEEEehhcC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCC
Confidence 999999999999999999995 688888854 346899999999999999999999 89999999999999999999
Q ss_pred CeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCC--cccHHHH
Q 002250 785 KPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGD--SKDIVNW 862 (947)
Q Consensus 785 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~--~~~~~~~ 862 (947)
.++|+|||++................||+.|+|||++....++.++|||||||++|||++|+.||.+.... ...+...
T Consensus 223 ~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i 302 (392)
T PHA03207 223 NAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSI 302 (392)
T ss_pred CEEEccCccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHH
Confidence 99999999997655443322233457999999999999889999999999999999999999999654321 1111111
Q ss_pred HHhhccccccccc---------------cccCC--CCccC--HHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 863 VYSKMDSRDSMLT---------------VVDPN--ISEIL--KEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 863 ~~~~~~~~~~~~~---------------~~d~~--~~~~~--~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
............. ...+. .++.. ......+.+++.+|+..||++|||+.|++.+
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 303 IRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred HHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 1110000000000 00000 00000 1123467788999999999999999999975
No 206
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.1e-34 Score=325.14 Aligned_cols=265 Identities=24% Similarity=0.282 Sum_probs=196.0
Q ss_pred HHhhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcccccc
Q 002250 626 EIIDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNV 704 (947)
Q Consensus 626 ~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 704 (947)
.+.++|++.+.||+|+||.||+|... +|+.||||++.... ........+.+|+.+++.++||||
T Consensus 18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---------------~~~~~~~~~~~E~~~l~~l~h~ni 82 (359)
T cd07876 18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPF---------------QNQTHAKRAYRELVLLKCVNHKNI 82 (359)
T ss_pred hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccc---------------cchhHHHHHHHHHHHHHhCCCCCE
Confidence 45689999999999999999999964 68999999984221 111234567789999999999999
Q ss_pred ceEEEEEecCC------ccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCe
Q 002250 705 VKLYCSITSED------SNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNI 778 (947)
Q Consensus 705 v~l~~~~~~~~------~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NI 778 (947)
+++++++.... ..|+||||+++ ++.+.+.. .+++..+..++.|++.||+||| +.+|+||||||+||
T Consensus 83 v~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~----~~~~~~~~~~~~qi~~~L~~LH---~~~ivHrDlkp~NI 154 (359)
T cd07876 83 ISLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIHM----ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNI 154 (359)
T ss_pred eeeeeeeccCCCccccceeEEEEeCCCc-CHHHHHhc----cCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHE
Confidence 99999986543 46899999965 66666643 3778888899999999999999 89999999999999
Q ss_pred EecCCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCc--
Q 002250 779 LLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDS-- 856 (947)
Q Consensus 779 ll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~-- 856 (947)
+++.++.+||+|||+++...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.......
T Consensus 155 l~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~ 231 (359)
T cd07876 155 VVKSDCTLKILDFGLARTACTNF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQW 231 (359)
T ss_pred EECCCCCEEEecCCCccccccCc---cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 99999999999999997543321 1223468999999999999899999999999999999999999996431100
Q ss_pred -----------ccHHHH----HHhhcccccccc-----ccc----cCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHH
Q 002250 857 -----------KDIVNW----VYSKMDSRDSML-----TVV----DPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRV 912 (947)
Q Consensus 857 -----------~~~~~~----~~~~~~~~~~~~-----~~~----d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~e 912 (947)
..+... +........... +.. .+............+.+++.+|+..||++|||+.|
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e 311 (359)
T cd07876 232 NKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDE 311 (359)
T ss_pred HHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHH
Confidence 000000 000000000000 000 00001111122456789999999999999999999
Q ss_pred HHHH
Q 002250 913 VVQM 916 (947)
Q Consensus 913 v~~~ 916 (947)
++++
T Consensus 312 ~l~h 315 (359)
T cd07876 312 ALRH 315 (359)
T ss_pred HhcC
Confidence 9975
No 207
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=1.2e-34 Score=318.12 Aligned_cols=262 Identities=21% Similarity=0.278 Sum_probs=196.2
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
++|...+.||+|+||.||+|+.+ +++.||+|++.... .......+.+|+.++++++||||+++
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----------------~~~~~~~~~~E~~~l~~l~h~~iv~~ 69 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEH----------------EEGAPCTAIREVSLLKDLKHANIVTL 69 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccc----------------cCCcchhHHHHHHHHHhCCCCCcceE
Confidence 56888999999999999999965 68899999984221 11223456789999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
++++..++..++||||+++ +|.+++.... ..+++.....++.|++.||+||| +.+|+||||||+||+++.++.+|
T Consensus 70 ~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~dlkp~Nill~~~~~~k 144 (309)
T cd07872 70 HDIVHTDKSLTLVFEYLDK-DLKQYMDDCG-NIMSMHNVKIFLYQILRGLAYCH---RRKVLHRDLKPQNLLINERGELK 144 (309)
T ss_pred EEEEeeCCeEEEEEeCCCC-CHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEE
Confidence 9999999999999999975 8888887643 35788889999999999999999 89999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYT-CKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSK 866 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 866 (947)
|+|||+++....... ......+|+.|+|||++.+ ..++.++||||+||++|||+||+.||.... ..+........
T Consensus 145 l~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~--~~~~~~~~~~~ 220 (309)
T cd07872 145 LADFGLARAKSVPTK--TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGST--VEDELHLIFRL 220 (309)
T ss_pred ECccccceecCCCcc--ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHHH
Confidence 999999975433221 1123457899999998865 458899999999999999999999985431 11111111111
Q ss_pred cc-----------ccccccccccCCC-----CccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 867 MD-----------SRDSMLTVVDPNI-----SEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 867 ~~-----------~~~~~~~~~d~~~-----~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
.. ........-.+.. ..........+.+++.+|++.||.+|||+.|+++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 221 LGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred hCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 00 0000000000000 0011123456789999999999999999999986
No 208
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=5e-35 Score=330.11 Aligned_cols=255 Identities=22% Similarity=0.277 Sum_probs=193.7
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
.|++.+.||+|+||.||+|+.. +++.||||++... ..........+.+|++++++++||||++++
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~--------------~~~~~~~~~~~~~E~~il~~l~h~~iv~~~ 67 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKA--------------DVLMRNQAAHVKAERDILAEADNEWVVKLY 67 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHH--------------HHHhhhhHHHHHHHHHHHHhCCCCCcceEE
Confidence 5888999999999999999955 6899999998311 011123346688999999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRI 788 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 788 (947)
+.+.+++..|+||||+++|+|.+++... ..++......++.||+.||+||| +.+|+||||||+||+++.++.+||
T Consensus 68 ~~~~~~~~~~lv~E~~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nill~~~~~ikL 142 (376)
T cd05598 68 YSFQDKDNLYFVMDYIPGGDMMSLLIRL--GIFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKL 142 (376)
T ss_pred EEEEcCCEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHEEECCCCCEEE
Confidence 9999999999999999999999999864 34778888889999999999999 899999999999999999999999
Q ss_pred eccccceecccCCC-----------------------------------------CcceecccccccccCccccccCCCC
Q 002250 789 ADFGLAKIVQTGEA-----------------------------------------GDLTHVIAGTHGYIAPEYAYTCKIN 827 (947)
Q Consensus 789 ~DfG~a~~~~~~~~-----------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~ 827 (947)
+|||+|........ .......+||+.|+|||++.+..++
T Consensus 143 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 222 (376)
T cd05598 143 TDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYT 222 (376)
T ss_pred EeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCC
Confidence 99999753210000 0001134699999999999998899
Q ss_pred CccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCC
Q 002250 828 EKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFR 907 (947)
Q Consensus 828 ~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~R 907 (947)
.++|||||||++|||++|+.||.... ..+............ ..+... .....+.+++.+|+ .+|.+|
T Consensus 223 ~~~DiwSlGvilyell~G~~Pf~~~~-----~~~~~~~i~~~~~~~---~~~~~~----~~s~~~~~li~~l~-~~p~~R 289 (376)
T cd05598 223 QLCDWWSVGVILYEMLVGQPPFLADT-----PAETQLKVINWETTL---HIPSQA----KLSREASDLILRLC-CGAEDR 289 (376)
T ss_pred cceeeeeccceeeehhhCCCCCCCCC-----HHHHHHHHhccCccc---cCCCCC----CCCHHHHHHHHHHh-cCHhhc
Confidence 99999999999999999999995431 111111111111100 001111 12334556666765 499999
Q ss_pred C---CHHHHHHH
Q 002250 908 P---SMRVVVQM 916 (947)
Q Consensus 908 P---t~~ev~~~ 916 (947)
+ ++.|++++
T Consensus 290 ~~~~t~~ell~h 301 (376)
T cd05598 290 LGKNGADEIKAH 301 (376)
T ss_pred CCCCCHHHHhCC
Confidence 9 88888865
No 209
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=2.1e-34 Score=307.43 Aligned_cols=252 Identities=24% Similarity=0.368 Sum_probs=201.9
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
.|++.+.||+|++|.||+|..+ +++.||+|++.... ......+.+.+|++++++++|+|+++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~---------------~~~~~~~~~~~e~~~l~~l~~~~i~~~~ 65 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRN---------------ASRRERKAAEQEAQLLSQLKHPNIVAYR 65 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhh---------------cCHHHHHHHHHHHHHHHhCCCCCeeeee
Confidence 4788899999999999999965 57899999983211 1112345688999999999999999999
Q ss_pred EEEecC-CccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 709 CSITSE-DSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 709 ~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
+.+... ...++||||+++++|.+++.......+++..+..++.+++.|++||| +.+++||||||+||+++.++.++
T Consensus 66 ~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH---~~~i~H~di~p~nil~~~~~~~~ 142 (257)
T cd08223 66 ESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLH---EKHILHRDLKTQNVFLTRTNIIK 142 (257)
T ss_pred eeecCCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCchhEEEecCCcEE
Confidence 988654 45789999999999999998755566899999999999999999999 89999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKM 867 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 867 (947)
|+|||++........ ......+++.|+|||+..+..++.++||||+|+++|||++|+.||... +.........
T Consensus 143 l~df~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~-----~~~~~~~~~~ 215 (257)
T cd08223 143 VGDLGIARVLENQCD--MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAK-----DMNSLVYRII 215 (257)
T ss_pred EecccceEEecccCC--ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCC-----CHHHHHHHHH
Confidence 999999986643221 122346789999999999988999999999999999999999998532 2222222211
Q ss_pred cccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 868 DSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 868 ~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
.. .++.........+.+++.+|++.+|++|||+.+++++
T Consensus 216 ~~----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 216 EG----------KLPPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred hc----------CCCCCccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 11 1112233445678899999999999999999999864
No 210
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=1.9e-34 Score=311.62 Aligned_cols=249 Identities=25% Similarity=0.368 Sum_probs=195.7
Q ss_pred ccCCcccccccCceeEEEEEe-CCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVL-NSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
+|+..+.||+|+||.||+|.. .+++.||+|++.... .......+.+|+.++++++||||++++
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~----------------~~~~~~~~~~E~~~l~~l~h~~iv~~~ 65 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI----------------TVELQKQIMSELEILYKCDSPYIIGFY 65 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC----------------ChHHHHHHHHHHHHHHhCCCCCeeeEE
Confidence 577889999999999999995 478999999883210 112235688999999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRI 788 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 788 (947)
+++..++..++||||+++++|..+. .+++.....++.|++.|++||| +.+|+|+||||+||+++.++.++|
T Consensus 66 ~~~~~~~~~~lv~e~~~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nill~~~~~~~l 136 (279)
T cd06619 66 GAFFVENRISICTEFMDGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLW---SLKILHRDVKPSNMLVNTRGQVKL 136 (279)
T ss_pred EEEEECCEEEEEEecCCCCChHHhh------cCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCCHHHEEECCCCCEEE
Confidence 9999999999999999999986542 3578888899999999999999 899999999999999999999999
Q ss_pred eccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCccc--HHHHHHhh
Q 002250 789 ADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKD--IVNWVYSK 866 (947)
Q Consensus 789 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~--~~~~~~~~ 866 (947)
+|||++....... .....||..|+|||++.+..++.++||||||+++|||++|+.||......... ...+....
T Consensus 137 ~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 212 (279)
T cd06619 137 CDFGVSTQLVNSI----AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCI 212 (279)
T ss_pred eeCCcceeccccc----ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHH
Confidence 9999997654322 22346899999999999888999999999999999999999999643322111 11111111
Q ss_pred ccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 867 MDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 867 ~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
..... +... .......+.+++.+|++.+|++||++.|++++
T Consensus 213 ~~~~~-------~~~~--~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 213 VDEDP-------PVLP--VGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred hccCC-------CCCC--CCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 11100 0110 11233467899999999999999999999875
No 211
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=1.3e-34 Score=309.06 Aligned_cols=250 Identities=25% Similarity=0.360 Sum_probs=196.0
Q ss_pred ccccccCceeEEEEEeC--C--CcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEEE
Q 002250 635 NLIGKGGSGNVYKVVLN--S--GKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYCS 710 (947)
Q Consensus 635 ~~iG~G~~g~Vy~~~~~--~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 710 (947)
+.||+|+||.||+|... + +..+|+|.+..... ......+.+|+++++.+.||||++++++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~----------------~~~~~~~~~e~~~l~~l~h~~iv~~~~~ 64 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHI----------------AAGKKEFLREASVMAQLDHPCIVRLIGV 64 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccc----------------hHHHHHHHHHHHHHHhcCCCCeeeEEEE
Confidence 46999999999999843 2 26899998842211 1234578899999999999999999998
Q ss_pred EecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEec
Q 002250 711 ITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIAD 790 (947)
Q Consensus 711 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 790 (947)
+. ....++||||+++|+|.+++.... .+++..+..++.|++.|++||| ..+++||||||+||+++.++.+||+|
T Consensus 65 ~~-~~~~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~nili~~~~~~kl~d 138 (257)
T cd05060 65 CK-GEPLMLVMELAPLGPLLKYLKKRR--EIPVSDLKELAHQVAMGMAYLE---SKHFVHRDLAARNVLLVNRHQAKISD 138 (257)
T ss_pred Ec-CCceEEEEEeCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHh---hcCeeccCcccceEEEcCCCcEEecc
Confidence 76 456799999999999999998743 6899999999999999999999 88999999999999999999999999
Q ss_pred cccceecccCCCCcc-eecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhcc
Q 002250 791 FGLAKIVQTGEAGDL-THVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNWVYSKMD 868 (947)
Q Consensus 791 fG~a~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 868 (947)
||.++.......... .....++..|+|||......++.++||||||+++|||++ |..||... ...++..+...
T Consensus 139 f~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~--~~~~~~~~~~~--- 213 (257)
T cd05060 139 FGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEM--KGAEVIAMLES--- 213 (257)
T ss_pred ccccceeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccC--CHHHHHHHHHc---
Confidence 999986644332111 111123567999999998899999999999999999998 99998532 12222222211
Q ss_pred ccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccC
Q 002250 869 SRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAE 921 (947)
Q Consensus 869 ~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~ 921 (947)
. .. .+.+...+..+.+++.+|++.+|++||++.++.+.|+++.
T Consensus 214 ~-~~---------~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 214 G-ER---------LPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred C-Cc---------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 1 10 1112233457889999999999999999999999998764
No 212
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.1e-34 Score=313.80 Aligned_cols=251 Identities=25% Similarity=0.363 Sum_probs=201.2
Q ss_pred hhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccce
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVK 706 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 706 (947)
..+|+..+.||+|+||.||+|... +++.||+|.+... .......+.+|+.+++.++||||++
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~-----------------~~~~~~~~~~e~~~l~~~~h~~v~~ 81 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ-----------------QQPKKELIINEILVMRENKNPNIVN 81 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecC-----------------CcchHHHHHHHHHHHHhCCCCCEee
Confidence 367888999999999999999954 6899999988311 1123466889999999999999999
Q ss_pred EEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCe
Q 002250 707 LYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKP 786 (947)
Q Consensus 707 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 786 (947)
+++.+..+...++||||+++++|.+++.. ..+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+
T Consensus 82 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~i~~ql~~aL~~LH---~~gi~H~dLkp~Nill~~~~~~ 155 (296)
T cd06654 82 YLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSV 155 (296)
T ss_pred EEEEEEeCCEEEEeecccCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCE
Confidence 99999999999999999999999999875 34788899999999999999999 8999999999999999999999
Q ss_pred EEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 002250 787 RIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSK 866 (947)
Q Consensus 787 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 866 (947)
+|+|||++........ ......|++.|+|||.+....++.++|||||||++|||++|+.||..... .......
T Consensus 156 kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~-----~~~~~~~ 228 (296)
T cd06654 156 KLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP-----LRALYLI 228 (296)
T ss_pred EECccccchhcccccc--ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCH-----HHhHHHH
Confidence 9999999875543221 11234688999999999888899999999999999999999999954321 1111111
Q ss_pred ccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 867 MDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 867 ~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
..... +. ...+......+.+++.+|+..+|++|||+.++++.
T Consensus 229 ~~~~~-------~~-~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 229 ATNGT-------PE-LQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred hcCCC-------CC-CCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 10000 00 11123344568889999999999999999999974
No 213
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1.4e-34 Score=316.53 Aligned_cols=260 Identities=24% Similarity=0.351 Sum_probs=200.8
Q ss_pred hccCCcccccccCceeEEEEEeC-CCc----EEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccc
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGK----ELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVN 703 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n 703 (947)
+.|+..+.||+|+||.||+|... +++ .||+|.+.... .......+.+|+.++++++|||
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~----------------~~~~~~~~~~e~~~~~~l~h~n 70 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT----------------GPKANVEFMDEALIMASMDHPH 70 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC----------------CHHHHHHHHHHHHHHHhCCCCC
Confidence 56778889999999999999854 444 47888773211 1122346889999999999999
Q ss_pred cceEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCC
Q 002250 704 VVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLE 783 (947)
Q Consensus 704 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~ 783 (947)
|+++++++..+ ..++|+||+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.+
T Consensus 71 iv~~~~~~~~~-~~~~v~e~~~~g~l~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dikp~Nill~~~ 145 (303)
T cd05110 71 LVRLLGVCLSP-TIQLVTQLMPHGCLLDYVHEH-KDNIGSQLLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSP 145 (303)
T ss_pred cccEEEEEcCC-CceeeehhcCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHh---hcCeeccccccceeeecCC
Confidence 99999998754 467999999999999998763 335788999999999999999999 8999999999999999999
Q ss_pred CCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHH
Q 002250 784 WKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNW 862 (947)
Q Consensus 784 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~ 862 (947)
+.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |+.||.... .....++
T Consensus 146 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~--~~~~~~~ 223 (303)
T cd05110 146 NHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP--TREIPDL 223 (303)
T ss_pred CceEEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHH
Confidence 9999999999986644332222223345778999999988889999999999999999998 889984321 1222222
Q ss_pred HHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCCCC
Q 002250 863 VYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAEPCS 924 (947)
Q Consensus 863 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 924 (947)
.. .... ..........+.+++.+||..+|++||++.++++.|+++...+
T Consensus 224 ~~----~~~~---------~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (303)
T cd05110 224 LE----KGER---------LPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDP 272 (303)
T ss_pred HH----CCCC---------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhch
Confidence 21 1111 0011123356788999999999999999999999999865444
No 214
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=2.1e-34 Score=307.16 Aligned_cols=253 Identities=23% Similarity=0.355 Sum_probs=204.7
Q ss_pred ccCCcccccccCceeEEEEEe-CCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVL-NSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
+|+..+.||+|+||.||.++. .+++.+++|.+.... ........+.+|++++++++|+||++++
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~---------------~~~~~~~~~~~e~~~l~~~~h~~i~~~~ 65 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTR---------------LSEKERRDALNEIVILSLLQHPNIIAYY 65 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecc---------------cchhHHHHHHHHHHHHHhCCCCCeeEEE
Confidence 477889999999999999994 468999999873211 1123345688999999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRI 788 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 788 (947)
+++.+++..++||||+++++|.+++.......+++..+..++.|++.|++||| +.+++||||+|+||++++++.+||
T Consensus 66 ~~~~~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~ni~~~~~~~~kl 142 (256)
T cd08221 66 NHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIH---KAGILHRDIKTLNIFLTKAGLIKL 142 (256)
T ss_pred eEEecCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChHhEEEeCCCCEEE
Confidence 99999999999999999999999998754567899999999999999999999 889999999999999999999999
Q ss_pred eccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcc
Q 002250 789 ADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMD 868 (947)
Q Consensus 789 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 868 (947)
+|||.+........ ......|++.|+|||+..+..++.++||||||+++|||++|..||... ...+.......
T Consensus 143 ~d~~~~~~~~~~~~--~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~-----~~~~~~~~~~~ 215 (256)
T cd08221 143 GDFGISKILGSEYS--MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDAT-----NPLNLVVKIVQ 215 (256)
T ss_pred CcCcceEEcccccc--cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCC-----CHHHHHHHHHc
Confidence 99999986644332 122346899999999998888899999999999999999999998432 22222222211
Q ss_pred ccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 002250 869 SRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQML 917 (947)
Q Consensus 869 ~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L 917 (947)
. ............+.+++.+|++.+|++||++.++++++
T Consensus 216 ~----------~~~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 216 G----------NYTPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred C----------CCCCCccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 1 11112233445688899999999999999999998753
No 215
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=9.7e-35 Score=320.76 Aligned_cols=245 Identities=22% Similarity=0.285 Sum_probs=191.3
Q ss_pred ccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-cccccceEEEEEe
Q 002250 635 NLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-RHVNVVKLYCSIT 712 (947)
Q Consensus 635 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 712 (947)
+.||+|+||+||+|+.. +++.||||++.... .........+.+|+.++.++ +||||+++++++.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~--------------~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~ 66 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKEL--------------VHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQ 66 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHH--------------hhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEE
Confidence 46999999999999965 67899999984211 11123345678899999888 6999999999999
Q ss_pred cCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEeccc
Q 002250 713 SEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFG 792 (947)
Q Consensus 713 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 792 (947)
..+..|+||||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||
T Consensus 67 ~~~~~~lv~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg 141 (327)
T cd05617 67 TTSRLFLVIEYVNGGDLMFHMQRQ--RKLPEEHARFYAAEICIALNFLH---ERGIIYRDLKLDNVLLDADGHIKLTDYG 141 (327)
T ss_pred eCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEeCCCCEEEeccc
Confidence 999999999999999999988763 35899999999999999999999 8999999999999999999999999999
Q ss_pred cceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCC-CcccHHHHHHhhccccc
Q 002250 793 LAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFG-DSKDIVNWVYSKMDSRD 871 (947)
Q Consensus 793 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~ 871 (947)
+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......++.........
T Consensus 142 ~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 219 (327)
T cd05617 142 MCKEGLGPG--DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKP 219 (327)
T ss_pred cceeccCCC--CceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCC
Confidence 987532221 122345799999999999999999999999999999999999999954221 11112222222221111
Q ss_pred cccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCH
Q 002250 872 SMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSM 910 (947)
Q Consensus 872 ~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~ 910 (947)
...+......+.+++.+|++.||++|+++
T Consensus 220 ----------~~~p~~~~~~~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 220 ----------IRIPRFLSVKASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred ----------CCCCCCCCHHHHHHHHHHhccCHHHcCCC
Confidence 11122233557789999999999999985
No 216
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=8.8e-35 Score=328.67 Aligned_cols=203 Identities=26% Similarity=0.356 Sum_probs=169.8
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
.|+..+.||+|+||+||+|+.. +++.||||++.... .........+.+|+.++++++||||++++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~--------------~~~~~~~~~~~~E~~il~~~~h~~iv~~~ 67 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKD--------------VLLRNQVAHVKAERDILAEADNEWVVRLY 67 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHH--------------hhhHHHHHHHHHHHHHHHhCCCCcCCeEE
Confidence 4778899999999999999964 68899999983110 01112345788999999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRI 788 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 788 (947)
+.+.+++..|+||||+++|+|.+++.+. ..+++.....++.|++.||+||| +.+|+||||||+|||++.++.+||
T Consensus 68 ~~~~~~~~~~lv~E~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~al~~lH---~~~ivHrDlKp~NILl~~~g~~kL 142 (382)
T cd05625 68 YSFQDKDNLYFVMDYIPGGDMMSLLIRM--GIFPEDLARFYIAELTCAVESVH---KMGFIHRDIKPDNILIDRDGHIKL 142 (382)
T ss_pred EEEEeCCEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEE
Confidence 9999999999999999999999999764 34778888889999999999999 899999999999999999999999
Q ss_pred eccccceecccCCC---------------------------------------------CcceecccccccccCcccccc
Q 002250 789 ADFGLAKIVQTGEA---------------------------------------------GDLTHVIAGTHGYIAPEYAYT 823 (947)
Q Consensus 789 ~DfG~a~~~~~~~~---------------------------------------------~~~~~~~~gt~~y~aPE~~~~ 823 (947)
+|||+++....... .......+||+.|+|||++.+
T Consensus 143 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~ 222 (382)
T cd05625 143 TDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLR 222 (382)
T ss_pred eECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcC
Confidence 99999753210000 000113468999999999998
Q ss_pred CCCCCccchHHHHHHHHHHHhCCCCCCC
Q 002250 824 CKINEKSDVYSFGVVLMELVTGKRPIVP 851 (947)
Q Consensus 824 ~~~~~~~Dv~slGv~l~elltg~~p~~~ 851 (947)
..++.++||||+||++|||++|+.||..
T Consensus 223 ~~~~~~~DiwSlGvil~elltG~~Pf~~ 250 (382)
T cd05625 223 TGYTQLCDWWSVGVILYEMLVGQPPFLA 250 (382)
T ss_pred CCCCCeeeEEechHHHHHHHhCCCCCCC
Confidence 8999999999999999999999999953
No 217
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=1.6e-34 Score=310.53 Aligned_cols=253 Identities=23% Similarity=0.284 Sum_probs=186.7
Q ss_pred cccccCceeEEEEEeCC---CcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEEEEe
Q 002250 636 LIGKGGSGNVYKVVLNS---GKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYCSIT 712 (947)
Q Consensus 636 ~iG~G~~g~Vy~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 712 (947)
.||+|+||+||+|...+ ...+|+|.+... ........+.+|+.+++.++||||+++++++.
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~----------------~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~ 65 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRAS----------------ATPDEQLLFLQEVQPYRELNHPNVLQCLGQCI 65 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCcc----------------CChHHHHHHHHHHHHHHhCCCCCcceEEEEEC
Confidence 58999999999997543 346888876211 01123456788999999999999999999999
Q ss_pred cCCccEEEEeccCCCChHHHhhhcCC---ccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEe
Q 002250 713 SEDSNLLVYEYLPNGSLWDRLHTCHK---IEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIA 789 (947)
Q Consensus 713 ~~~~~~lv~e~~~~gsL~~~l~~~~~---~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 789 (947)
..+..++||||+++|+|.+++..... ...++.....++.|++.|++||| +.+|+||||||+||+++.++.+||+
T Consensus 66 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~ 142 (269)
T cd05042 66 ESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLH---QADFIHSDLALRNCQLTADLSVKIG 142 (269)
T ss_pred CCCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHH---hcCEecccccHhheEecCCCcEEEe
Confidence 99999999999999999999976432 23467788899999999999999 8999999999999999999999999
Q ss_pred ccccceecccCCCCcceecccccccccCcccccc-------CCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHH
Q 002250 790 DFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYT-------CKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVN 861 (947)
Q Consensus 790 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~ 861 (947)
|||++................++..|+|||+... ..++.++|||||||++|||++ |..||.... ..+.
T Consensus 143 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~--~~~~-- 218 (269)
T cd05042 143 DYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLS--DEQV-- 218 (269)
T ss_pred ccccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCC--HHHH--
Confidence 9999875433322111223346778999998743 346789999999999999999 677774221 1111
Q ss_pred HHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 002250 862 WVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLE 918 (947)
Q Consensus 862 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~ 918 (947)
......... .....+ .........+.+++..|| .||++|||+.+|++.|.
T Consensus 219 -~~~~~~~~~--~~~~~~---~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 219 -LKQVVREQD--IKLPKP---QLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred -HHHHhhccC--ccCCCC---cccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 111111111 111111 122233455667888898 59999999999999874
No 218
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1.1e-34 Score=314.62 Aligned_cols=265 Identities=23% Similarity=0.245 Sum_probs=197.1
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
+|++.+.||+|++|.||+|+.. +++.||||++.... ........+.+|+.++++++||||++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~---------------~~~~~~~~~~~e~~~l~~l~h~~i~~~~ 65 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLES---------------EEEGVPSTAIREISLLKELQHPNIVCLQ 65 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEecccc---------------ccCCchHHHHHHHHHHHhcCCCCEeeeE
Confidence 3677889999999999999965 68999999884211 1122345678899999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcC-CccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCH-KIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
+++..++..++||||++ ++|.+++.... ...+++..+..++.|++.||+||| +.+++||||||+||+++.++.++
T Consensus 66 ~~~~~~~~~~~v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~~ 141 (285)
T cd07861 66 DVLMQESRLYLIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCH---SRRVLHRDLKPQNLLIDNKGVIK 141 (285)
T ss_pred EEEeeCCeEEEEEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEEcCCCcEE
Confidence 99999999999999997 68988887543 356899999999999999999999 89999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccccC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTC-KINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSK 866 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 866 (947)
|+|||++........ ......+++.|+|||++.+. .++.++||||||+++|||+||+.||...... ..........
T Consensus 142 l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~-~~~~~~~~~~ 218 (285)
T cd07861 142 LADFGLARAFGIPVR--VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEI-DQLFRIFRIL 218 (285)
T ss_pred ECcccceeecCCCcc--cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHh
Confidence 999999975533211 11233568899999988654 4788999999999999999999998543210 0011100000
Q ss_pred ccc--------------cccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 867 MDS--------------RDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 867 ~~~--------------~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
... .....................++.+++.+|++.||++|||+.+++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 219 GTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred CCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 000 00000000011111111234567899999999999999999999863
No 219
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=2.1e-34 Score=311.37 Aligned_cols=261 Identities=23% Similarity=0.335 Sum_probs=203.8
Q ss_pred hccCCcccccccCceeEEEEEeC-CCc----EEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccc
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGK----ELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVN 703 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n 703 (947)
++|++.+.||+|+||.||+|..+ +|+ .||+|.+.... .......+.+|+.++++++|||
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~----------------~~~~~~~~~~e~~~l~~l~h~~ 70 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREET----------------SPKANKEILDEAYVMASVDHPH 70 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCC----------------CHHHHHHHHHHHHHHHhCCCCC
Confidence 57888899999999999999965 333 58999873221 1123467889999999999999
Q ss_pred cceEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCC
Q 002250 704 VVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLE 783 (947)
Q Consensus 704 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~ 783 (947)
|+++++++.. ...++||||+++|+|.+++.... ..+++.....++.|++.|++||| +.+++||||||+||+++++
T Consensus 71 i~~~~~~~~~-~~~~~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~di~p~nil~~~~ 145 (279)
T cd05057 71 VVRLLGICLS-SQVQLITQLMPLGCLLDYVRNHK-DNIGSQYLLNWCVQIAKGMSYLE---EKRLVHRDLAARNVLVKTP 145 (279)
T ss_pred cceEEEEEec-CceEEEEecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---hCCEEecccCcceEEEcCC
Confidence 9999999987 78899999999999999998643 34899999999999999999999 8999999999999999999
Q ss_pred CCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHH
Q 002250 784 WKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNW 862 (947)
Q Consensus 784 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~ 862 (947)
+.+||+|||.++...............++..|+|||......++.++|+||||+++||+++ |+.||... ...++...
T Consensus 146 ~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~--~~~~~~~~ 223 (279)
T cd05057 146 QHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGI--PAVEIPDL 223 (279)
T ss_pred CeEEECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCC--CHHHHHHH
Confidence 9999999999986653322211112224568999999988889999999999999999999 99998432 11122221
Q ss_pred HHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCCCCc
Q 002250 863 VYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAEPCSV 925 (947)
Q Consensus 863 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~~ 925 (947)
+ ... .. ...+..+...+.+++.+||..+|.+||++.++++.|+++..-+.
T Consensus 224 ~---~~~-~~---------~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~~ 273 (279)
T cd05057 224 L---EKG-ER---------LPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARDPQ 273 (279)
T ss_pred H---hCC-CC---------CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhCCc
Confidence 1 111 10 11111233467889999999999999999999999998755443
No 220
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.6e-34 Score=312.91 Aligned_cols=253 Identities=25% Similarity=0.268 Sum_probs=197.3
Q ss_pred cCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEE
Q 002250 631 VKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYC 709 (947)
Q Consensus 631 ~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 709 (947)
|+..+.||+|+||+||+|... +++.||+|.+.... .........+.+|++++++++|+||+++.+
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~--------------~~~~~~~~~~~~E~~il~~l~~~~i~~~~~ 67 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKR--------------IKKRKGESMALNEKQILEKVNSQFVVNLAY 67 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhh--------------hhhhhHHHHHHHHHHHHHHcCCcCceeEEE
Confidence 556788999999999999965 78999999883211 011122345778999999999999999999
Q ss_pred EEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEe
Q 002250 710 SITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIA 789 (947)
Q Consensus 710 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 789 (947)
++..++..++||||+++++|.+++.......+++.....++.|++.||+||| +.+|+||||||+||++++++.++|+
T Consensus 68 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH---~~~iiH~dikp~Nili~~~~~~kl~ 144 (285)
T cd05632 68 AYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLH---RENTVYRDLKPENILLDDYGHIRIS 144 (285)
T ss_pred EEecCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEECCCCCEEEe
Confidence 9999999999999999999999987655557999999999999999999999 8999999999999999999999999
Q ss_pred ccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhccc
Q 002250 790 DFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDS 869 (947)
Q Consensus 790 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 869 (947)
|||++........ .....|+..|+|||++.+..++.++|+||||+++|||++|+.||..... .....-.......
T Consensus 145 Dfg~~~~~~~~~~---~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~--~~~~~~~~~~~~~ 219 (285)
T cd05632 145 DLGLAVKIPEGES---IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKE--KVKREEVDRRVLE 219 (285)
T ss_pred cCCcceecCCCCc---ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHhhhc
Confidence 9999976543221 1234689999999999988899999999999999999999999853211 0001111111111
Q ss_pred cccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHH
Q 002250 870 RDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPS-----MRVVVQ 915 (947)
Q Consensus 870 ~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~ev~~ 915 (947)
.. ..........+.+++..|++.||++||+ +.++++
T Consensus 220 ~~----------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 220 TE----------EVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred cc----------cccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 00 0112223445788999999999999999 455554
No 221
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.3e-34 Score=311.29 Aligned_cols=249 Identities=24% Similarity=0.364 Sum_probs=192.0
Q ss_pred ccccccCceeEEEEEeC-CCc--EEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-cccccceEEEE
Q 002250 635 NLIGKGGSGNVYKVVLN-SGK--ELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-RHVNVVKLYCS 710 (947)
Q Consensus 635 ~~iG~G~~g~Vy~~~~~-~~~--~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~ 710 (947)
+.||+|+||.||+|..+ ++. .+|+|.+... ........+.+|+++++++ +||||++++++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~----------------~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 64 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY----------------ASKDDHRDFAGELEVLCKLGHHPNIINLLGA 64 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEcccc----------------CCHHHHHHHHHHHHHHHhhccCCCeeeEEEE
Confidence 46899999999999975 343 4688877311 0112235688999999999 79999999999
Q ss_pred EecCCccEEEEeccCCCChHHHhhhcC--------------CccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCC
Q 002250 711 ITSEDSNLLVYEYLPNGSLWDRLHTCH--------------KIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSS 776 (947)
Q Consensus 711 ~~~~~~~~lv~e~~~~gsL~~~l~~~~--------------~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~ 776 (947)
+...+..++||||+++|+|.+++.... ...+++..+..++.|++.|++||| +.+++||||||+
T Consensus 65 ~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~ 141 (270)
T cd05047 65 CEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAAR 141 (270)
T ss_pred EecCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccccc
Confidence 999999999999999999999997532 124788999999999999999999 899999999999
Q ss_pred CeEecCCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCC
Q 002250 777 NILLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGD 855 (947)
Q Consensus 777 NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~ 855 (947)
||++++++.+|++|||++....... .......+..|+|||++....++.++||||||+++|||++ |..||...
T Consensus 142 nili~~~~~~kl~dfgl~~~~~~~~---~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~--- 215 (270)
T cd05047 142 NILVGENYVAKIADFGLSRGQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM--- 215 (270)
T ss_pred eEEEcCCCeEEECCCCCccccchhh---hccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCcccc---
Confidence 9999999999999999985322110 1111223567999999988889999999999999999997 99998432
Q ss_pred cccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 002250 856 SKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEA 920 (947)
Q Consensus 856 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 920 (947)
+..+.... ...... .+.+......+.+++.+|++.+|.+|||+.++++.|+++
T Consensus 216 --~~~~~~~~-~~~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~ 268 (270)
T cd05047 216 --TCAELYEK-LPQGYR---------LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 268 (270)
T ss_pred --CHHHHHHH-HhCCCC---------CCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHh
Confidence 11111111 111100 111122345688999999999999999999999999864
No 222
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=1.5e-34 Score=308.23 Aligned_cols=252 Identities=25% Similarity=0.367 Sum_probs=203.9
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
+|+..+.||+|+||.||++... +|+.||+|++.... .......++.+|+.++++++||||++++
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~---------------~~~~~~~~~~~e~~~l~~l~~~~i~~~~ 65 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISK---------------MSPKEREESRKEVAVLSNMKHPNIVQYQ 65 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHh---------------CChHHHHHHHHHHHHHHhCCCCCeeeeE
Confidence 4778899999999999999954 78999999883111 1112345788999999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRI 788 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 788 (947)
+++...+..++||||+++++|.+++.......+++.....++.|++.|++||| +.+++|+||+|+||+++.++.+++
T Consensus 66 ~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~l~~~nil~~~~~~~~l 142 (256)
T cd08218 66 ESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTIKL 142 (256)
T ss_pred eeecCCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEE
Confidence 99999999999999999999999998755556789999999999999999999 899999999999999999999999
Q ss_pred eccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcc
Q 002250 789 ADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMD 868 (947)
Q Consensus 789 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 868 (947)
+|||.+......... .....|++.|+|||+..+..++.++|+|||||++|||++|+.||... +..+.+.....
T Consensus 143 ~d~~~~~~~~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~-----~~~~~~~~~~~ 215 (256)
T cd08218 143 GDFGIARVLNSTVEL--ARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAG-----NMKNLVLKIIR 215 (256)
T ss_pred eeccceeecCcchhh--hhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCC-----CHHHHHHHHhc
Confidence 999999765433211 12345788999999998888999999999999999999999998432 22222222221
Q ss_pred ccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 869 SRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 869 ~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
. .....+......+.+++.+|++.+|++||++.+|+++
T Consensus 216 ~----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 216 G----------SYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred C----------CCCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 1 1112233345678899999999999999999999874
No 223
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.7e-34 Score=306.99 Aligned_cols=250 Identities=26% Similarity=0.355 Sum_probs=196.8
Q ss_pred ccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEEEEecC
Q 002250 635 NLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYCSITSE 714 (947)
Q Consensus 635 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 714 (947)
+.||+|+||.||+|...+++.||+|.+.... .......+.+|++++++++||||+++++++...
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~----------------~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 64 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTL----------------PPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQK 64 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccC----------------CHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecC
Confidence 4689999999999997779999999873211 012345788999999999999999999999999
Q ss_pred CccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEeccccc
Q 002250 715 DSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFGLA 794 (947)
Q Consensus 715 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a 794 (947)
...++||||+++++|.+++... ...+++.....++.+++.|++||| +++++||||+|+||+++.++.++|+|||.+
T Consensus 65 ~~~~~v~e~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~l~~lH---~~~i~h~di~p~nili~~~~~~~l~d~g~~ 140 (251)
T cd05041 65 QPIYIVMELVPGGSLLTFLRKK-KNRLTVKKLLQMSLDAAAGMEYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMS 140 (251)
T ss_pred CCeEEEEEcCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---hCCEehhhcCcceEEEcCCCcEEEeecccc
Confidence 9999999999999999999763 235788999999999999999999 899999999999999999999999999999
Q ss_pred eecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhccccccc
Q 002250 795 KIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNWVYSKMDSRDSM 873 (947)
Q Consensus 795 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 873 (947)
................++..|+|||++.++.++.++|+||||+++|||+| |..||.... ........ .....
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~--~~~~~~~~----~~~~~- 213 (251)
T cd05041 141 REEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMS--NQQTRERI----ESGYR- 213 (251)
T ss_pred ccccCCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCC--HHHHHHHH----hcCCC-
Confidence 75542221111112234567999999988889999999999999999999 788874321 11111111 11000
Q ss_pred cccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhc
Q 002250 874 LTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEE 919 (947)
Q Consensus 874 ~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~ 919 (947)
...+...+..+.+++.+|++.+|++|||+.|+++.|++
T Consensus 214 --------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~~ 251 (251)
T cd05041 214 --------MPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQI 251 (251)
T ss_pred --------CCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence 11122345578999999999999999999999998863
No 224
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=3.6e-34 Score=306.10 Aligned_cols=240 Identities=23% Similarity=0.350 Sum_probs=185.1
Q ss_pred ccccccCceeEEEEEeCC-------------CcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccc
Q 002250 635 NLIGKGGSGNVYKVVLNS-------------GKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRH 701 (947)
Q Consensus 635 ~~iG~G~~g~Vy~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 701 (947)
+.||+|+||.||+|+..+ ...||+|++... .......+.+|+.+++.++|
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~-----------------~~~~~~~~~~~~~~l~~l~h 63 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPS-----------------HRDISLAFFETASMMRQVSH 63 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChh-----------------hhhHHHHHHHHHHHHHhCCC
Confidence 468999999999998542 225888876311 11234568889999999999
Q ss_pred cccceEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEec
Q 002250 702 VNVVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLD 781 (947)
Q Consensus 702 ~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~ 781 (947)
|||+++++++..+...++||||+++|+|..++... ...+++..+..++.|+++||+||| +.+|+||||||+||+++
T Consensus 64 p~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nill~ 139 (262)
T cd05077 64 KHIVLLYGVCVRDVENIMVEEFVEFGPLDLFMHRK-SDVLTTPWKFKVAKQLASALSYLE---DKDLVHGNVCTKNILLA 139 (262)
T ss_pred CCEeeEEEEEecCCCCEEEEecccCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhh---hCCeECCCCCcccEEEe
Confidence 99999999999999999999999999999888753 345889999999999999999999 89999999999999998
Q ss_pred CCCC-------eEEeccccceecccCCCCcceecccccccccCccccc-cCCCCCccchHHHHHHHHHHHh-CCCCCCCC
Q 002250 782 LEWK-------PRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAY-TCKINEKSDVYSFGVVLMELVT-GKRPIVPE 852 (947)
Q Consensus 782 ~~~~-------~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~ 852 (947)
.++. ++++|||++...... ....++..|+|||++. ...++.++|||||||++|||++ |..||...
T Consensus 140 ~~~~~~~~~~~~~l~d~g~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~ 213 (262)
T cd05077 140 REGIDGECGPFIKLSDPGIPITVLSR------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDK 213 (262)
T ss_pred cCCccCCCCceeEeCCCCCCccccCc------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCc
Confidence 7654 899999998654322 1235788999999886 4568899999999999999984 77776422
Q ss_pred CCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 002250 853 FGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLE 918 (947)
Q Consensus 853 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~ 918 (947)
...+.. ........ ........+.+++.+||+.||.+||++.++++.++
T Consensus 214 -----~~~~~~-~~~~~~~~-----------~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 214 -----TLAEKE-RFYEGQCM-----------LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred -----chhHHH-HHHhcCcc-----------CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 111110 00000000 01112346789999999999999999999998763
No 225
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=1.4e-34 Score=310.70 Aligned_cols=258 Identities=25% Similarity=0.364 Sum_probs=201.3
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
+|.+...||+|++|.||+|... +++.||+|.+........ .........+.+.+|+.++++++||||++++
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~--------~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~ 72 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSAS--------SKDRKRSMLDALAREIALLKELQHENIVQYL 72 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccc--------hhHHHHHHHHHHHHHHHHHHhcCCCCeeeEE
Confidence 3677889999999999999864 688999998853322110 0111112235788999999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRI 788 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 788 (947)
+++..++..++||||+++++|.+++... ..+++.....++.|++.|++||| +.+++||||+|+||++++++.++|
T Consensus 73 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lH---~~~ivH~di~p~nil~~~~~~~~l 147 (267)
T cd06628 73 GSSLDADHLNIFLEYVPGGSVAALLNNY--GAFEETLVRNFVRQILKGLNYLH---NRGIIHRDIKGANILVDNKGGIKI 147 (267)
T ss_pred EEEEeCCccEEEEEecCCCCHHHHHHhc--cCccHHHHHHHHHHHHHHHHHHH---hcCcccccCCHHHEEEcCCCCEEe
Confidence 9999999999999999999999999864 45788888999999999999999 889999999999999999999999
Q ss_pred eccccceecccCCCC----cceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 002250 789 ADFGLAKIVQTGEAG----DLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVY 864 (947)
Q Consensus 789 ~DfG~a~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~ 864 (947)
+|||.++........ .......|+..|+|||.+.+..++.++||||+|+++|||++|+.||.... . .....
T Consensus 148 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~----~-~~~~~ 222 (267)
T cd06628 148 SDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCT----Q-LQAIF 222 (267)
T ss_pred cccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCcc----H-HHHHH
Confidence 999999766432111 11123457889999999998889999999999999999999999985321 1 11111
Q ss_pred hhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 865 SKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 865 ~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
.... ...+..+...+..+.+++.+||+.||.+||++.|+++
T Consensus 223 ~~~~----------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 223 KIGE----------NASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred HHhc----------cCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 1111 1112223344567888999999999999999999986
No 226
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=4e-34 Score=304.63 Aligned_cols=247 Identities=26% Similarity=0.389 Sum_probs=198.8
Q ss_pred hccCCcccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
+.|++.+.||+|+||.||++.. .++.||+|.+... .....+.+|+.++++++|||+++++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~-------------------~~~~~~~~e~~~l~~~~~~~i~~~~ 65 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCD-------------------VTAQAFLEETAVMTKLHHKNLVRLL 65 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCc-------------------chHHHHHHHHHHHHhCCCCCcCeEE
Confidence 5688899999999999999975 4788999987311 1235788999999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRI 788 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 788 (947)
+++..+ ..++||||+++++|.+++.......+++..+..++.|++.|++||| +.+++||||||+||+++.++.++|
T Consensus 66 ~~~~~~-~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~~~H~dl~p~nili~~~~~~kl 141 (254)
T cd05083 66 GVILHN-GLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLE---SKKLVHRDLAARNILVSEDGVAKV 141 (254)
T ss_pred EEEcCC-CcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCcEEE
Confidence 998764 5799999999999999998765566899999999999999999999 899999999999999999999999
Q ss_pred eccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhc
Q 002250 789 ADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNWVYSKM 867 (947)
Q Consensus 789 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 867 (947)
+|||.+....... .....+..|+|||++.++.++.++|+||||+++|||++ |+.||... +..+.....
T Consensus 142 ~Dfg~~~~~~~~~-----~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~-----~~~~~~~~~- 210 (254)
T cd05083 142 SDFGLARVGSMGV-----DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKM-----SLKEVKECV- 210 (254)
T ss_pred CCCccceeccccC-----CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccC-----CHHHHHHHH-
Confidence 9999997543321 12234568999999988889999999999999999998 88888432 111111111
Q ss_pred cccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhc
Q 002250 868 DSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEE 919 (947)
Q Consensus 868 ~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~ 919 (947)
..... .+.....+..+.+++.+|++.+|++||+++++++.|++
T Consensus 211 ~~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 211 EKGYR---------MEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred hCCCC---------CCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 11110 01112334668899999999999999999999998874
No 227
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=8.4e-35 Score=314.11 Aligned_cols=249 Identities=26% Similarity=0.375 Sum_probs=199.7
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
+.|+..+.||+|+||.||+|... +++.||+|.+.... .......+.+|++++++++||||+++
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~----------------~~~~~~~~~~e~~~l~~l~h~~i~~~ 67 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEE----------------AEDEIEDIQQEITVLSQCDSPYITRY 67 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEecccc----------------chHHHHHHHHHHHHHHcCCCCccHhh
Confidence 45667788999999999999865 67899999873110 11234578899999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
++++..+...++||||+++++|.+++.. ..+++..+..++.|++.|++||| +.+++|+||+|+||++++++.++
T Consensus 68 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~ivH~dl~p~ni~i~~~~~~~ 141 (277)
T cd06642 68 YGSYLKGTKLWIIMEYLGGGSALDLLKP---GPLEETYIATILREILKGLDYLH---SERKIHRDIKAANVLLSEQGDVK 141 (277)
T ss_pred hcccccCCceEEEEEccCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHh---cCCeeccCCChheEEEeCCCCEE
Confidence 9999999999999999999999999865 45788999999999999999999 89999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKM 867 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 867 (947)
++|||++........ ......|+..|+|||++.+..++.++||||||+++|||++|+.||..... .......
T Consensus 142 l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~-----~~~~~~~- 213 (277)
T cd06642 142 LADFGVAGQLTDTQI--KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHP-----MRVLFLI- 213 (277)
T ss_pred EccccccccccCcch--hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccch-----hhHHhhh-
Confidence 999999976543221 11234578899999999988899999999999999999999999843211 0111100
Q ss_pred cccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 868 DSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 868 ~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
.....+......+..+.+++.+|++.+|++||+|.+++++
T Consensus 214 ---------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 214 ---------PKNSPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred ---------hcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 0011112223445678899999999999999999999984
No 228
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.2e-34 Score=312.00 Aligned_cols=261 Identities=24% Similarity=0.326 Sum_probs=206.1
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
++|++.+.||+|+||+||+|... +++.||+|++... ........+.+|+++++.++||||+++
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~----------------~~~~~~~~~~~E~~~l~~l~h~~i~~~ 68 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIG----------------AKSSVRKQILRELQIMHECRSPYIVSF 68 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEec----------------CcchHHHHHHHHHHHHHHcCCCCcceE
Confidence 56888899999999999999955 6889999987321 112234678899999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
++++...+..++||||+++++|.+++... ..+++.....++.+++.|+.|||+ ..+++||||+|+||++++++.++
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~ 144 (284)
T cd06620 69 YGAFLNENNICMCMEFMDCGSLDRIYKKG--GPIPVEILGKIAVAVVEGLTYLYN--VHRIMHRDIKPSNILVNSRGQIK 144 (284)
T ss_pred eeeEecCCEEEEEEecCCCCCHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHH--hcCeeccCCCHHHEEECCCCcEE
Confidence 99999999999999999999999998763 358899999999999999999994 36899999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCC------cccHHH
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGD------SKDIVN 861 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~------~~~~~~ 861 (947)
|+|||++....... .....|+..|+|||++.++.++.++|||||||++|||++|+.||...... ...+.+
T Consensus 145 l~d~gl~~~~~~~~----~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~ 220 (284)
T cd06620 145 LCDFGVSGELINSI----ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILD 220 (284)
T ss_pred EccCCcccchhhhc----cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHH
Confidence 99999986543221 12346899999999998888999999999999999999999999643321 111112
Q ss_pred HHHhhccccccccccccCCCCccC-HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCCC
Q 002250 862 WVYSKMDSRDSMLTVVDPNISEIL-KEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAEPC 923 (947)
Q Consensus 862 ~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~ 923 (947)
+........ ..... .+.+..+.+++.+|++.||++|||+.|++++..-++.+
T Consensus 221 ~~~~~~~~~----------~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~~ 273 (284)
T cd06620 221 LLQQIVQEP----------PPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQAL 273 (284)
T ss_pred HHHHHhhcc----------CCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence 221111111 11111 12456788999999999999999999999975544444
No 229
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=5.5e-35 Score=320.77 Aligned_cols=198 Identities=24% Similarity=0.316 Sum_probs=170.6
Q ss_pred HHhhccCCcccccccCceeEEEEE-eCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcc-cc-
Q 002250 626 EIIDAVKPENLIGKGGSGNVYKVV-LNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVR-HV- 702 (947)
Q Consensus 626 ~~~~~~~~~~~iG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~- 702 (947)
.+..+|.+.+.||+|+||.|-||. .++++.||||+++- ......+-..|+.+|..++ |.
T Consensus 183 ~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN------------------~k~f~~Q~~~Ei~iL~~ln~~d~ 244 (586)
T KOG0667|consen 183 HIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKN------------------KKRFLRQAQIEIRILELLNKHDP 244 (586)
T ss_pred eeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeecc------------------ChHHHHHHHHHHHHHHHHhccCC
Confidence 334588999999999999999999 45799999999831 1122344567999999997 53
Q ss_pred ----ccceEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCe
Q 002250 703 ----NVVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNI 778 (947)
Q Consensus 703 ----niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NI 778 (947)
|+|+++++|...++.|||+|.+ .-+|.++++......++......++.||+.||.+|| +.+|||+||||+||
T Consensus 245 ~~~~n~Vrm~d~F~fr~HlciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~---~l~IIHcDLKPENI 320 (586)
T KOG0667|consen 245 DDKYNIVRMLDYFYFRNHLCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLH---ELGIIHCDLKPENI 320 (586)
T ss_pred CCCeeEEEeeeccccccceeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCChhhe
Confidence 8999999999999999999999 569999999988888999999999999999999999 89999999999999
Q ss_pred EecCC--CCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCC
Q 002250 779 LLDLE--WKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIV 850 (947)
Q Consensus 779 ll~~~--~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~ 850 (947)
|+.+- ..+||+|||.|.+...... ..+-+..|.|||++.+.+|+.+.||||||||++||++|.+-|.
T Consensus 321 LL~~~~r~~vKVIDFGSSc~~~q~vy-----tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfp 389 (586)
T KOG0667|consen 321 LLKDPKRSRIKVIDFGSSCFESQRVY-----TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFP 389 (586)
T ss_pred eeccCCcCceeEEecccccccCCcce-----eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccC
Confidence 99743 4799999999987655432 2345788999999999999999999999999999999966653
No 230
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.3e-34 Score=324.08 Aligned_cols=264 Identities=23% Similarity=0.258 Sum_probs=196.1
Q ss_pred HHhhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcccccc
Q 002250 626 EIIDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNV 704 (947)
Q Consensus 626 ~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 704 (947)
.+.++|+..+.||+|+||.||+|... .++.||||++.... ........+.+|+.+++.++||||
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------------~~~~~~~~~~~E~~~l~~l~h~ni 78 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF---------------QNQTHAKRAYRELVLMKCVNHKNI 78 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcc---------------cChHHHHHHHHHHHHHHHhCCCch
Confidence 45689999999999999999999854 68999999884211 111234567789999999999999
Q ss_pred ceEEEEEecCC------ccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCe
Q 002250 705 VKLYCSITSED------SNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNI 778 (947)
Q Consensus 705 v~l~~~~~~~~------~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NI 778 (947)
+++++++.... ..++||||+++ ++.+.+.. .+++..+..++.|++.||+||| +.+|+||||||+||
T Consensus 79 v~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH---~~givHrDikp~Ni 150 (355)
T cd07874 79 ISLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNI 150 (355)
T ss_pred hceeeeeeccccccccceeEEEhhhhcc-cHHHHHhh----cCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHE
Confidence 99999886543 46899999965 67776653 4788888999999999999999 89999999999999
Q ss_pred EecCCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCccc
Q 002250 779 LLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKD 858 (947)
Q Consensus 779 ll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~ 858 (947)
+++.++.+||+|||+++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ...
T Consensus 151 ll~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-~~~ 226 (355)
T cd07874 151 VVKSDCTLKILDFGLARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY-IDQ 226 (355)
T ss_pred EECCCCCEEEeeCcccccCCCccc---cCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHH
Confidence 999999999999999976543221 2234689999999999988899999999999999999999999853210 000
Q ss_pred HHHHH------------------HhhccccccccccccC-----CC----CccCHHHHHHHHHHHHhccCCCCCCCCCHH
Q 002250 859 IVNWV------------------YSKMDSRDSMLTVVDP-----NI----SEILKEDALKVLRIAIHCTNKLPAFRPSMR 911 (947)
Q Consensus 859 ~~~~~------------------~~~~~~~~~~~~~~d~-----~~----~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 911 (947)
..... ...............+ .. ..........+.+++.+|++.||++|||+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ 306 (355)
T cd07874 227 WNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVD 306 (355)
T ss_pred HHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHH
Confidence 00000 0000000000000000 00 111112345678999999999999999999
Q ss_pred HHHHH
Q 002250 912 VVVQM 916 (947)
Q Consensus 912 ev~~~ 916 (947)
|++++
T Consensus 307 ell~h 311 (355)
T cd07874 307 EALQH 311 (355)
T ss_pred HHhcC
Confidence 99985
No 231
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1.9e-34 Score=317.86 Aligned_cols=243 Identities=24% Similarity=0.274 Sum_probs=191.1
Q ss_pred cCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcc-ccccceEE
Q 002250 631 VKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVR-HVNVVKLY 708 (947)
Q Consensus 631 ~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~ 708 (947)
|+..+.||+|+||+||+|+.+ +|+.||||++... ..........+..|+.+++.+. |++|++++
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--------------~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~ 67 (323)
T cd05615 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKD--------------VVIQDDDVECTMVEKRVLALQDKPPFLTQLH 67 (323)
T ss_pred ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHH--------------HhhhhhHHHHHHHHHHHHHhccCCCchhhee
Confidence 567789999999999999965 6899999998311 0111233456778899998886 57788899
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRI 788 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 788 (947)
+++..++..|+||||+++|+|.+++... ..+++.....++.|++.||+||| +.+|+||||||+||+++.++.+||
T Consensus 68 ~~~~~~~~~~lv~Ey~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH---~~~ivHrDikp~Nill~~~~~ikL 142 (323)
T cd05615 68 SCFQTVDRLYFVMEYVNGGDLMYHIQQV--GKFKEPQAVFYAAEISVGLFFLH---RRGIIYRDLKLDNVMLDSEGHIKI 142 (323)
T ss_pred eEEecCCEEEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEE
Confidence 9999999999999999999999999764 35889999999999999999999 899999999999999999999999
Q ss_pred eccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcc
Q 002250 789 ADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMD 868 (947)
Q Consensus 789 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 868 (947)
+|||+++....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.... ..........
T Consensus 143 ~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~-----~~~~~~~i~~ 215 (323)
T cd05615 143 ADFGMCKEHMVDGV--TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGED-----EDELFQSIME 215 (323)
T ss_pred eccccccccCCCCc--cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCC-----HHHHHHHHHh
Confidence 99999875432221 1223468999999999998889999999999999999999999985321 1111111111
Q ss_pred ccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCH
Q 002250 869 SRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSM 910 (947)
Q Consensus 869 ~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~ 910 (947)
... ..+......+.+++.+|++.+|.+|++.
T Consensus 216 ~~~-----------~~p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 216 HNV-----------SYPKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred CCC-----------CCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence 111 1112233467889999999999999975
No 232
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=2.9e-34 Score=317.49 Aligned_cols=265 Identities=18% Similarity=0.241 Sum_probs=194.1
Q ss_pred Cccccccc--CceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEE
Q 002250 633 PENLIGKG--GSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYC 709 (947)
Q Consensus 633 ~~~~iG~G--~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 709 (947)
+.+.||+| +||+||++..+ +|+.||||++.... ........+++|+++++.++||||+++++
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~---------------~~~~~~~~~~~e~~~l~~l~hpniv~~~~ 66 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEA---------------CTNEMVTFLQGELHVSKLFNHPNIVPYRA 66 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhh---------------ccHHHHHHHHHHHHHHHhcCCCCeeeEEE
Confidence 45789999 78999999854 78999999983211 01122356778999999999999999999
Q ss_pred EEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEe
Q 002250 710 SITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIA 789 (947)
Q Consensus 710 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 789 (947)
++..++..++||||+++|+|.+++.......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.++++
T Consensus 67 ~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiH~dlkp~Nil~~~~~~~~l~ 143 (327)
T cd08227 67 TFIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLS 143 (327)
T ss_pred EEEECCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCChhhEEEecCCcEEEc
Confidence 9999999999999999999999997654456899999999999999999999 8999999999999999999999999
Q ss_pred ccccceecccCCC-----CcceecccccccccCcccccc--CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHH
Q 002250 790 DFGLAKIVQTGEA-----GDLTHVIAGTHGYIAPEYAYT--CKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNW 862 (947)
Q Consensus 790 DfG~a~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~ 862 (947)
|||.+........ ........++..|+|||++.. ..++.++|||||||++|||++|+.||...... ......
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~~ 222 (327)
T cd08227 144 GLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPAT-QMLLEK 222 (327)
T ss_pred ccchhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchh-HHHHHH
Confidence 9986543221110 011122356778999999875 35889999999999999999999999532110 001000
Q ss_pred HHhhcccc---------c----ccccccc------------------CCCCccCHHHHHHHHHHHHhccCCCCCCCCCHH
Q 002250 863 VYSKMDSR---------D----SMLTVVD------------------PNISEILKEDALKVLRIAIHCTNKLPAFRPSMR 911 (947)
Q Consensus 863 ~~~~~~~~---------~----~~~~~~d------------------~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 911 (947)
........ . ......+ ....+........+.+++.+|++.||++|||+.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ 302 (327)
T cd08227 223 LNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSAS 302 (327)
T ss_pred hcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHH
Confidence 00000000 0 0000000 000112223455788999999999999999999
Q ss_pred HHHHH
Q 002250 912 VVVQM 916 (947)
Q Consensus 912 ev~~~ 916 (947)
|++++
T Consensus 303 ell~~ 307 (327)
T cd08227 303 TLLNH 307 (327)
T ss_pred HHhcC
Confidence 99863
No 233
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.4e-34 Score=325.87 Aligned_cols=262 Identities=20% Similarity=0.247 Sum_probs=195.1
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
+|+..+.||+|+||.||+|... +++.||||++.... ........+.+|+++++.++||||++++
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------------~~~~~~~~~~~E~~~l~~l~h~niv~~~ 65 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVF---------------QNLVSCKRVFRELKMLCFFKHDNVLSAL 65 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccc---------------cchHHHHHHHHHHHHHHhCCCCCcCCHh
Confidence 3678899999999999999964 78999999873110 0112235678999999999999999999
Q ss_pred EEEecCC-----ccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCC
Q 002250 709 CSITSED-----SNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLE 783 (947)
Q Consensus 709 ~~~~~~~-----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~ 783 (947)
+++..++ ..|+||||+. ++|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+||+++.+
T Consensus 66 ~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~--~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nili~~~ 139 (372)
T cd07853 66 DILQPPHIDPFEEIYVVTELMQ-SDLHKIIVS--PQPLSSDHVKVFLYQILRGLKYLH---SAGILHRDIKPGNLLVNSN 139 (372)
T ss_pred heecCCCccccceEEEEeeccc-cCHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHHEEECCC
Confidence 9998876 7899999996 578888765 345889999999999999999999 8999999999999999999
Q ss_pred CCeEEeccccceecccCCCCcceecccccccccCccccccC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHH
Q 002250 784 WKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTC-KINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNW 862 (947)
Q Consensus 784 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~ 862 (947)
+.+||+|||+++........ ......+|+.|+|||++.+. .++.++||||+||++|||++|+.||..... .+....
T Consensus 140 ~~~kL~Dfg~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--~~~~~~ 216 (372)
T cd07853 140 CVLKICDFGLARVEEPDESK-HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSP--IQQLDL 216 (372)
T ss_pred CCEEeccccceeecccCccc-cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCH--HHHHHH
Confidence 99999999999865433221 12234578999999998764 478999999999999999999999954321 011110
Q ss_pred HHhhcc-------------------ccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 863 VYSKMD-------------------SRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 863 ~~~~~~-------------------~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
+..... ........ ..............+.+++.+|++.||++|||+.|++++
T Consensus 217 i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 217 ITDLLGTPSLEAMRSACEGARAHILRGPHKPPS-LPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCc-hHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 000000 00000000 000001112234568899999999999999999999874
No 234
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1.5e-34 Score=319.85 Aligned_cols=258 Identities=20% Similarity=0.255 Sum_probs=196.8
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
++|++.+.||+|+||+||+++.. +++.||+|++... ..........+.+|+.++..++|++|+++
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~--------------~~~~~~~~~~~~~e~~~l~~~~~~~i~~l 66 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKW--------------EMLKRAETACFREERNVLVNGDCQWITTL 66 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHH--------------HHHhhHHHHHHHHHHHHHHhCCCCCEeeE
Confidence 46888999999999999999965 6889999988310 01112234567889999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
++++..++..|+||||+++|+|.+++... ...+++.....++.|++.||+||| +.+|+||||||+||+++.++.+|
T Consensus 67 ~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~~L~~lH---~~~iiHrDlkp~Nill~~~~~~k 142 (331)
T cd05624 67 HYAFQDENYLYLVMDYYVGGDLLTLLSKF-EDRLPEDMARFYIAEMVLAIHSIH---QLHYVHRDIKPDNVLLDMNGHIR 142 (331)
T ss_pred EEEEEcCCEEEEEEeCCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCchHHEEEcCCCCEE
Confidence 99999999999999999999999999863 235788888899999999999999 89999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCcccccc-----CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHH
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYT-----CKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNW 862 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~ 862 (947)
|+|||++......... ......||+.|+|||++.. +.++.++|||||||++|||++|+.||... +..+.
T Consensus 143 l~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~-----~~~~~ 216 (331)
T cd05624 143 LADFGSCLKMNQDGTV-QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAE-----SLVET 216 (331)
T ss_pred EEeccceeeccCCCce-eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCC-----CHHHH
Confidence 9999999765443221 1223569999999999865 46788999999999999999999999532 12222
Q ss_pred HHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCC--CCCHHHHHHH
Q 002250 863 VYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAF--RPSMRVVVQM 916 (947)
Q Consensus 863 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPt~~ev~~~ 916 (947)
.......... ..++....+....+.+++.+|+..++.+ |+++.++.++
T Consensus 217 ~~~i~~~~~~------~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 217 YGKIMNHEER------FQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred HHHHHcCCCc------ccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 1111111110 0111222223456777888888866544 4688888754
No 235
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=3.7e-34 Score=313.72 Aligned_cols=261 Identities=23% Similarity=0.335 Sum_probs=198.9
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
+|++.+.||+|+||.||+|... ++..+|+|.+.... .......+.+|++++++++||||++++
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~----------------~~~~~~~~~~E~~~l~~l~h~~iv~~~ 65 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI----------------KPAIRNQIIRELKVLHECNSPYIVGFY 65 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc----------------CHHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence 5888999999999999999965 68889999873110 112235678899999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRI 788 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 788 (947)
+++..++..++||||+++++|.++++.. ..+++.....++.|+++||+|||+ ..+++||||||+||+++.++.++|
T Consensus 66 ~~~~~~~~~~lv~ey~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~--~~~i~H~dl~p~nil~~~~~~~~l 141 (308)
T cd06615 66 GAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPENILGKISIAVLRGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKL 141 (308)
T ss_pred EEEeeCCEEEEEeeccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh--hCCEEECCCChHHEEEecCCcEEE
Confidence 9999999999999999999999999864 457888899999999999999993 258999999999999999999999
Q ss_pred eccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcc
Q 002250 789 ADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMD 868 (947)
Q Consensus 789 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 868 (947)
+|||++....... .....|+..|+|||++.+..++.++||||||+++|||++|+.||.... ......+......
T Consensus 142 ~dfg~~~~~~~~~----~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~--~~~~~~~~~~~~~ 215 (308)
T cd06615 142 CDFGVSGQLIDSM----ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPD--AKELEAMFGRPVS 215 (308)
T ss_pred ccCCCcccccccc----cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcc--hhhHHHhhcCccc
Confidence 9999987543322 123468899999999988889999999999999999999999985321 1111111110000
Q ss_pred cccc-----------------------ccccccCCCCccC-HHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 869 SRDS-----------------------MLTVVDPNISEIL-KEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 869 ~~~~-----------------------~~~~~d~~~~~~~-~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
.... .........+..+ ......+.+++.+|++.+|++|||+.|++++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 216 EGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred cccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000 0000000000000 0134568899999999999999999999976
No 236
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-34 Score=303.87 Aligned_cols=265 Identities=22% Similarity=0.287 Sum_probs=215.4
Q ss_pred HHHhhccCCcccccccCceeEEEEEe-CCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccc
Q 002250 625 KEIIDAVKPENLIGKGGSGNVYKVVL-NSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVN 703 (947)
Q Consensus 625 ~~~~~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n 703 (947)
..+..-|...+.||+|.|++|-.|++ -+|..||||++..- .........+..|++.|+.++|||
T Consensus 14 gkIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKT---------------KlD~~st~hlfqEVRCMKLVQHpN 78 (864)
T KOG4717|consen 14 GKIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKT---------------KLDTLSTGHLFQEVRCMKLVQHPN 78 (864)
T ss_pred cceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEeccc---------------ccchhhhhHHHHHHHHHHHhcCcC
Confidence 44567788899999999999999994 47999999999321 122234456778999999999999
Q ss_pred cceEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEec-C
Q 002250 704 VVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLD-L 782 (947)
Q Consensus 704 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~-~ 782 (947)
||++|++...+...|+|+|.=++|+|.||+-+. ...+.+....+++.||+.|+.|+| ...+|||||||+||.+- .
T Consensus 79 iVRLYEViDTQTKlyLiLELGD~GDl~DyImKH-e~Gl~E~La~kYF~QI~~AI~YCH---qLHVVHRDLKPENVVFFEK 154 (864)
T KOG4717|consen 79 IVRLYEVIDTQTKLYLILELGDGGDLFDYIMKH-EEGLNEDLAKKYFAQIVHAISYCH---QLHVVHRDLKPENVVFFEK 154 (864)
T ss_pred eeeeeehhcccceEEEEEEecCCchHHHHHHhh-hccccHHHHHHHHHHHHHHHHHHh---hhhhhcccCCcceeEEeee
Confidence 999999999999999999999999999999874 345788888999999999999999 78899999999999775 5
Q ss_pred CCCeEEeccccceecccCCCCcceecccccccccCccccccCCCC-CccchHHHHHHHHHHHhCCCCCCCCCCCcccHHH
Q 002250 783 EWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKIN-EKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVN 861 (947)
Q Consensus 783 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~ 861 (947)
-|-+||+|||++..+.+++.. ...+|...|.|||++.+..|+ +++||||+||++|-+++|+.||... +-.+
T Consensus 155 lGlVKLTDFGFSNkf~PG~kL---~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeA-----NDSE 226 (864)
T KOG4717|consen 155 LGLVKLTDFGFSNKFQPGKKL---TTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEA-----NDSE 226 (864)
T ss_pred cCceEeeeccccccCCCcchh---hcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccc-----cchh
Confidence 688999999999877666543 345899999999999999998 5789999999999999999999422 1122
Q ss_pred HHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH--HhhccCCCCcce
Q 002250 862 WVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQ--MLEEAEPCSVTN 927 (947)
Q Consensus 862 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~--~L~~~~~~~~~~ 927 (947)
.+...++... ..+.....++.++|..|+..||.+|.+..||+. .|+...+.+.++
T Consensus 227 TLTmImDCKY-----------tvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~~~sT~ 283 (864)
T KOG4717|consen 227 TLTMIMDCKY-----------TVPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDRGLSTA 283 (864)
T ss_pred hhhhhhcccc-----------cCchhhhHHHHHHHHHHHhcCchhhccHHHHhccccccCCCCCcccc
Confidence 2222233222 245566778899999999999999999999984 466666666554
No 237
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=2e-34 Score=310.04 Aligned_cols=257 Identities=22% Similarity=0.320 Sum_probs=200.8
Q ss_pred hccCCcccccccCceeEEEEEeCC----CcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcccccc
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLNS----GKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNV 704 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 704 (947)
++|.+.+.||+|+||.||+|...+ ...||||...... .....+.+.+|+.++++++||||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~----------------~~~~~~~~~~e~~~l~~~~h~~i 69 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT----------------SPSVREKFLQEAYIMRQFDHPHI 69 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC----------------CHHHHHHHHHHHHHHHhCCCCch
Confidence 457788999999999999998643 3468999873211 01234578899999999999999
Q ss_pred ceEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCC
Q 002250 705 VKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEW 784 (947)
Q Consensus 705 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~ 784 (947)
+++++++.. ...++||||+++|+|.+++.... ..+++..+..++.|++.|++||| +.+++||||||+||+++.++
T Consensus 70 ~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH---~~~~~H~dl~p~nili~~~~ 144 (270)
T cd05056 70 VKLIGVITE-NPVWIVMELAPLGELRSYLQVNK-YSLDLASLILYSYQLSTALAYLE---SKRFVHRDIAARNVLVSSPD 144 (270)
T ss_pred hceeEEEcC-CCcEEEEEcCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccChheEEEecCC
Confidence 999999875 45789999999999999997643 35899999999999999999999 89999999999999999999
Q ss_pred CeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHH
Q 002250 785 KPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNWV 863 (947)
Q Consensus 785 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~ 863 (947)
.++++|||+++........... ...++..|+|||.+....++.++||||||+++||+++ |..||..... .+.....
T Consensus 145 ~~~l~d~g~~~~~~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~--~~~~~~~ 221 (270)
T cd05056 145 CVKLGDFGLSRYLEDESYYKAS-KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKN--NDVIGRI 221 (270)
T ss_pred CeEEccCceeeecccccceecC-CCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCH--HHHHHHH
Confidence 9999999999865443221111 2234568999999988889999999999999999996 9999853321 1111111
Q ss_pred HhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCC
Q 002250 864 YSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAEP 922 (947)
Q Consensus 864 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 922 (947)
... .. ...+...+..+.+++.+|+..+|++|||+.++++.|+++..
T Consensus 222 ---~~~-~~---------~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~ 267 (270)
T cd05056 222 ---ENG-ER---------LPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQ 267 (270)
T ss_pred ---HcC-Cc---------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 111 10 01122345578889999999999999999999999998654
No 238
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=3.1e-34 Score=316.14 Aligned_cols=196 Identities=25% Similarity=0.387 Sum_probs=159.0
Q ss_pred cccccccCceeEEEEEeC---CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEEE
Q 002250 634 ENLIGKGGSGNVYKVVLN---SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYCS 710 (947)
Q Consensus 634 ~~~iG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 710 (947)
.++||+|+||+||+|+.. +++.||+|.+... .....+.+|+.++++++||||++++++
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~-------------------~~~~~~~~E~~~l~~l~h~niv~~~~~ 66 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGT-------------------GISMSACREIALLRELKHPNVISLQKV 66 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCC-------------------CCcHHHHHHHHHHHhcCCCCCcceeee
Confidence 467999999999999864 4678999988311 123456789999999999999999999
Q ss_pred Eec--CCccEEEEeccCCCChHHHhhhc-------CCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEe-
Q 002250 711 ITS--EDSNLLVYEYLPNGSLWDRLHTC-------HKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILL- 780 (947)
Q Consensus 711 ~~~--~~~~~lv~e~~~~gsL~~~l~~~-------~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll- 780 (947)
+.. +...++||||++ ++|.+++... ....+++.....++.|++.||+||| +.+|+||||||+||++
T Consensus 67 ~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivHrDlkp~Nil~~ 142 (317)
T cd07868 67 FLSHADRKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVM 142 (317)
T ss_pred EecCCCcEEEEEEeccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEe
Confidence 865 445789999995 5888887532 1235888899999999999999999 8999999999999999
Q ss_pred ---cCCCCeEEeccccceecccCCCC-cceecccccccccCccccccC-CCCCccchHHHHHHHHHHHhCCCCCCCC
Q 002250 781 ---DLEWKPRIADFGLAKIVQTGEAG-DLTHVIAGTHGYIAPEYAYTC-KINEKSDVYSFGVVLMELVTGKRPIVPE 852 (947)
Q Consensus 781 ---~~~~~~kl~DfG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~ 852 (947)
+.++.+||+|||+|+........ .......||+.|+|||++.+. .++.++||||+||++|||++|++||...
T Consensus 143 ~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 143 GEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred cCCCCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 45678999999999865433211 122345689999999998764 5889999999999999999999999643
No 239
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=1.9e-34 Score=315.20 Aligned_cols=262 Identities=21% Similarity=0.280 Sum_probs=196.5
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
++|.+.+.||+|+||.||+|+.. +++.||+|.+.... .......+.+|+.++++++||||+++
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~----------------~~~~~~~~~~E~~~l~~l~h~nI~~~ 69 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEH----------------EEGAPCTAIREVSLLKDLKHANIVTL 69 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEeccc----------------ccCchhHHHHHHHHHHhcCCCCcceE
Confidence 57888999999999999999965 68899999884221 11223456789999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
++++..++..++||||++ ++|.+++... ...+++.....++.|++.||+||| +.+|+||||||+||+++.++.++
T Consensus 70 ~~~~~~~~~~~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~k 144 (301)
T cd07873 70 HDIIHTEKSLTLVFEYLD-KDLKQYLDDC-GNSINMHNVKLFLFQLLRGLNYCH---RRKVLHRDLKPQNLLINERGELK 144 (301)
T ss_pred EEEEecCCeEEEEEeccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHHHEEECCCCcEE
Confidence 999999999999999996 5899888764 335788899999999999999999 89999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccccC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTC-KINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSK 866 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 866 (947)
|+|||++........ ......+++.|+|||++.+. .++.++|||||||++|||++|+.||.... ..+........
T Consensus 145 l~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~--~~~~~~~~~~~ 220 (301)
T cd07873 145 LADFGLARAKSIPTK--TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGST--VEEQLHFIFRI 220 (301)
T ss_pred ECcCcchhccCCCCC--cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHH
Confidence 999999975433221 11233568899999988654 47889999999999999999999985331 11111111111
Q ss_pred ccc--cccccccc------cCCCC--------ccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 867 MDS--RDSMLTVV------DPNIS--------EILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 867 ~~~--~~~~~~~~------d~~~~--------~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
... ...+.... ....+ .........+.+++.+|++.||.+|||+.|+++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 221 LGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred cCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 100 00000000 00001 111123446788999999999999999999986
No 240
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=5.3e-34 Score=306.12 Aligned_cols=253 Identities=18% Similarity=0.269 Sum_probs=185.3
Q ss_pred cccccCceeEEEEEeCCCc---EEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEEEEe
Q 002250 636 LIGKGGSGNVYKVVLNSGK---ELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYCSIT 712 (947)
Q Consensus 636 ~iG~G~~g~Vy~~~~~~~~---~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 712 (947)
.||+|+||+||+|...++. .+++|.+... ........+.+|+.+++.++||||+++++++.
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~----------------~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~ 65 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKAN----------------ASSKEQNEFLQQGDPYRILQHPNILQCLGQCV 65 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCC----------------CChHHHHHHHHHHHHHhccCCcchhheEEEec
Confidence 5899999999999854433 4566665211 11123467889999999999999999999999
Q ss_pred cCCccEEEEeccCCCChHHHhhhcC--CccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEec
Q 002250 713 SEDSNLLVYEYLPNGSLWDRLHTCH--KIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIAD 790 (947)
Q Consensus 713 ~~~~~~lv~e~~~~gsL~~~l~~~~--~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 790 (947)
.....++||||+++|+|.++++... ....++.....++.|++.||+||| +.+++||||||+||+++.++.++|+|
T Consensus 66 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nil~~~~~~~~l~D 142 (268)
T cd05086 66 EAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMH---KHNFLHSDLALRNCFLTSDLTVKVGD 142 (268)
T ss_pred CCCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH---HCCeeccCCccceEEEcCCccEEecc
Confidence 9999999999999999999998642 234667778889999999999999 88999999999999999999999999
Q ss_pred cccceecccCCCCcceecccccccccCcccccc-------CCCCCccchHHHHHHHHHHHhC-CCCCCCCCCCcccHHHH
Q 002250 791 FGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYT-------CKINEKSDVYSFGVVLMELVTG-KRPIVPEFGDSKDIVNW 862 (947)
Q Consensus 791 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~slGv~l~elltg-~~p~~~~~~~~~~~~~~ 862 (947)
||++................++..|+|||++.. ..++.++||||||+++|||+++ ..||... . . .+.
T Consensus 143 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~-~-~---~~~ 217 (268)
T cd05086 143 YGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHL-S-D---REV 217 (268)
T ss_pred cccccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCC-C-H---HHH
Confidence 999864322211111223467889999998753 2357789999999999999984 5676321 1 1 111
Q ss_pred HHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 002250 863 VYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLE 918 (947)
Q Consensus 863 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~ 918 (947)
......... ....++.+... ....+.+++..|| .+|++||++.++++.|.
T Consensus 218 ~~~~~~~~~--~~~~~~~~~~~---~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 218 LNHVIKDQQ--VKLFKPQLELP---YSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred HHHHHhhcc--cccCCCccCCC---CcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 111111111 12222332221 2345677888999 67999999999999874
No 241
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2.1e-34 Score=310.49 Aligned_cols=249 Identities=27% Similarity=0.382 Sum_probs=201.2
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
++|+..+.||.|++|.||+|+.. +++.||+|++... ........+.+|++++++++|+||+++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~----------------~~~~~~~~~~~e~~~l~~l~h~~i~~~ 64 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLE----------------EAEDEIEDIQQEIQFLSQCRSPYITKY 64 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeecc----------------ccchHHHHHHHHHHHHHHcCCCCeeee
Confidence 36788899999999999999965 6899999988311 112334568899999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
++++.++...++|+||+++++|.+++... .+++.....++.|++.|++||| +.+++||||+|+||++++++.++
T Consensus 65 ~~~~~~~~~~~~v~e~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~ 138 (274)
T cd06609 65 YGSFLKGSKLWIIMEYCGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLH---EEGKIHRDIKAANILLSEEGDVK 138 (274)
T ss_pred eEEEEECCeEEEEEEeeCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEE
Confidence 99999999999999999999999999863 6899999999999999999999 89999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKM 867 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 867 (947)
|+|||+++....... ......+++.|+|||++.+..++.++||||||+++|||++|+.||.... .........
T Consensus 139 l~d~g~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~-----~~~~~~~~~ 211 (274)
T cd06609 139 LADFGVSGQLTSTMS--KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLH-----PMRVLFLIP 211 (274)
T ss_pred Ecccccceeeccccc--ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCc-----hHHHHHHhh
Confidence 999999987654321 1223467889999999998889999999999999999999999985321 111111110
Q ss_pred cccccccccccCCCCccCHH-HHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 868 DSRDSMLTVVDPNISEILKE-DALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 868 ~~~~~~~~~~d~~~~~~~~~-~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
.. ..+..... .+..+.+++.+|+..+|++|||+.+++++
T Consensus 212 ~~----------~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 212 KN----------NPPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred hc----------CCCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 00 00111111 34568889999999999999999999874
No 242
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=1.5e-34 Score=313.56 Aligned_cols=263 Identities=27% Similarity=0.363 Sum_probs=203.3
Q ss_pred hccCCcccccccCceeEEEEEeC-----CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccc
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-----SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVN 703 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n 703 (947)
+.|+..+.||+|+||.||+|... +++.||||++..... ......+.+|+++++.++|||
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~----------------~~~~~~~~~ei~~l~~l~~~~ 67 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGE----------------EQHRSDFEREIEILRTLDHEN 67 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccc----------------hHHHHHHHHHHHHHHhCCCCC
Confidence 45777899999999999999854 367899999842210 023467899999999999999
Q ss_pred cceEEEEEec--CCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEec
Q 002250 704 VVKLYCSITS--EDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLD 781 (947)
Q Consensus 704 iv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~ 781 (947)
|+++++++.. +...++||||+++++|.+++.... ..+++..+..++.|++.||+||| +.+++||||||+||+++
T Consensus 68 i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~nil~~ 143 (284)
T cd05038 68 IVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLG---SQRYIHRDLAARNILVE 143 (284)
T ss_pred hheEEeeeecCCCCceEEEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEc
Confidence 9999999887 557899999999999999998743 35899999999999999999999 89999999999999999
Q ss_pred CCCCeEEeccccceecccCCCC-cceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCccc--
Q 002250 782 LEWKPRIADFGLAKIVQTGEAG-DLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKD-- 858 (947)
Q Consensus 782 ~~~~~kl~DfG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~-- 858 (947)
.++.++|+|||.+......... .......++..|+|||...+..++.++||||||+++|||++|+.|+.........
T Consensus 144 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~ 223 (284)
T cd05038 144 SEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMI 223 (284)
T ss_pred CCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcccc
Confidence 9999999999999876533221 1111223456799999998888999999999999999999999997543211100
Q ss_pred -------HHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 002250 859 -------IVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEA 920 (947)
Q Consensus 859 -------~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 920 (947)
.............. ......++..+.+++.+|++.+|++||||.|++++|+++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 224 GIAQGQMIVTRLLELLKEGER---------LPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred ccccccccHHHHHHHHHcCCc---------CCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 00001111111100 111223446789999999999999999999999999875
No 243
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.7e-34 Score=322.62 Aligned_cols=264 Identities=21% Similarity=0.243 Sum_probs=195.7
Q ss_pred HHhhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcccccc
Q 002250 626 EIIDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNV 704 (947)
Q Consensus 626 ~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 704 (947)
.+.++|++.+.||+|+||.||+|... .++.||||++.... ........+.+|+.+++.++||||
T Consensus 21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------------~~~~~~~~~~~E~~~l~~l~h~~i 85 (364)
T cd07875 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF---------------QNQTHAKRAYRELVLMKCVNHKNI 85 (364)
T ss_pred chhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccc---------------cCchhHHHHHHHHHHHHhcCCCCc
Confidence 35688999999999999999999955 68899999984211 111234567789999999999999
Q ss_pred ceEEEEEecC------CccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCe
Q 002250 705 VKLYCSITSE------DSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNI 778 (947)
Q Consensus 705 v~l~~~~~~~------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NI 778 (947)
+++++++... ...|+||||+++ ++.+++.. .+++..+..++.|++.||+||| +++|+||||||+||
T Consensus 86 i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NI 157 (364)
T cd07875 86 IGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNI 157 (364)
T ss_pred cccceeecccccccccCeEEEEEeCCCC-CHHHHHHh----cCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHE
Confidence 9999987653 346999999964 77777753 3788889999999999999999 89999999999999
Q ss_pred EecCCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCccc
Q 002250 779 LLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKD 858 (947)
Q Consensus 779 ll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~ 858 (947)
+++.++.+||+|||+++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ...
T Consensus 158 ll~~~~~~kL~DfG~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-~~~ 233 (364)
T cd07875 158 VVKSDCTLKILDFGLARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH-IDQ 233 (364)
T ss_pred EECCCCcEEEEeCCCccccCCCCc---ccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCH-HHH
Confidence 999999999999999976543221 2234689999999999998999999999999999999999999953210 000
Q ss_pred HHHHHH------------------hhcccccccc-----ccc----cCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHH
Q 002250 859 IVNWVY------------------SKMDSRDSML-----TVV----DPNISEILKEDALKVLRIAIHCTNKLPAFRPSMR 911 (947)
Q Consensus 859 ~~~~~~------------------~~~~~~~~~~-----~~~----d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 911 (947)
...... .......... ... -+............+.+++.+|++.||.+|||+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~ 313 (364)
T cd07875 234 WNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVD 313 (364)
T ss_pred HHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHH
Confidence 000000 0000000000 000 0000111111234678999999999999999999
Q ss_pred HHHHH
Q 002250 912 VVVQM 916 (947)
Q Consensus 912 ev~~~ 916 (947)
|++++
T Consensus 314 e~L~h 318 (364)
T cd07875 314 EALQH 318 (364)
T ss_pred HHhcC
Confidence 99875
No 244
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=9e-35 Score=310.81 Aligned_cols=254 Identities=29% Similarity=0.423 Sum_probs=196.6
Q ss_pred cCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEE
Q 002250 631 VKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYC 709 (947)
Q Consensus 631 ~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 709 (947)
|++.+.||+|+||+||+|+.. +++.||+|++..... .........+|+.++++++||||+++++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~---------------~~~~~~~~~~e~~~~~~l~~~~i~~~~~ 65 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEI---------------EEEEREENIREIKILRRLRHPNIVQILD 65 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTH---------------HHHHHHHHHHHHHHHHHHTBTTBCHEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccc---------------cccccchhhhhhhccccccccccccccc
Confidence 567889999999999999976 567899999842210 0011123345999999999999999999
Q ss_pred EEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEe
Q 002250 710 SITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIA 789 (947)
Q Consensus 710 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 789 (947)
++..+...++||||+++++|.+++.. ...+++..+..++.|+++||+||| +.+|+||||||+||+++.++.++|+
T Consensus 66 ~~~~~~~~~~v~~~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~L~~Lh---~~~i~H~dikp~NIl~~~~~~~~l~ 140 (260)
T PF00069_consen 66 VFQDDNYLYIVMEYCPGGSLQDYLQK--NKPLSEEEILKIAYQILEALAYLH---SKGIVHRDIKPENILLDENGEVKLI 140 (260)
T ss_dssp EEEESSEEEEEEEEETTEBHHHHHHH--HSSBBHHHHHHHHHHHHHHHHHHH---HTTEEESSBSGGGEEESTTSEEEES
T ss_pred cccccccccccccccccccccccccc--cccccccccccccccccccccccc---ccccccccccccccccccccccccc
Confidence 99999999999999999999999983 345799999999999999999999 7899999999999999999999999
Q ss_pred ccccceecccCCCCcceecccccccccCccccc-cCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcc
Q 002250 790 DFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAY-TCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMD 868 (947)
Q Consensus 790 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 868 (947)
|||.+..... .........++..|+|||++. ...++.++||||+|+++|+|++|..||... ...+..........
T Consensus 141 Dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~--~~~~~~~~~~~~~~ 216 (260)
T PF00069_consen 141 DFGSSVKLSE--NNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEES--NSDDQLEIIEKILK 216 (260)
T ss_dssp SGTTTEESTS--TTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTS--SHHHHHHHHHHHHH
T ss_pred cccccccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccc--cchhhhhhhhhccc
Confidence 9999976411 122233456899999999998 788999999999999999999999998543 11111111111111
Q ss_pred ccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 869 SRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 869 ~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
.... .... ........+.+++.+|++.||++||++.++++
T Consensus 217 ~~~~------~~~~-~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 217 RPLP------SSSQ-QSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp THHH------HHTT-SHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred cccc------cccc-ccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0000 0000 00011267999999999999999999999986
No 245
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=4.2e-34 Score=306.60 Aligned_cols=257 Identities=23% Similarity=0.353 Sum_probs=200.4
Q ss_pred ccCCcccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYC 709 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 709 (947)
+|+..+.||+|+||+||+|...+++.+|||.+....... .........+.+|++++++++|+||+++++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~-----------~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~ 69 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNV-----------LAAEKEYEKLQEEVDLLKSLKHVNIVQYLG 69 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccch-----------hhHHHHHHHHHHHHHHHHhcCCCCEeeEee
Confidence 477889999999999999998889999999884321100 001122356889999999999999999999
Q ss_pred EEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEe
Q 002250 710 SITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIA 789 (947)
Q Consensus 710 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 789 (947)
++.+.+..++||||+++++|.+++.+. ..+++.....++.|++.|++||| +.+|+|+||+|+||++++++.++|+
T Consensus 70 ~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~ 144 (265)
T cd06631 70 TCLDDNTISIFMEFVPGGSISSILNRF--GPLPEPVFCKYTKQILDGVAYLH---NNCVVHRDIKGNNVMLMPNGIIKLI 144 (265)
T ss_pred EeecCCeEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHhEEECCCCeEEec
Confidence 999999999999999999999999764 34788889999999999999999 8899999999999999999999999
Q ss_pred ccccceecccCCC----CcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHh
Q 002250 790 DFGLAKIVQTGEA----GDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYS 865 (947)
Q Consensus 790 DfG~a~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~ 865 (947)
|||.+........ ........|+..|+|||+..+..++.++||||||+++|||++|+.||.... ...... .
T Consensus 145 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~----~~~~~~-~ 219 (265)
T cd06631 145 DFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMD----RLAAMF-Y 219 (265)
T ss_pred cchhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCC----hHHHHH-H
Confidence 9999875432111 111223458899999999998889999999999999999999999985321 111111 1
Q ss_pred hccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 866 KMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 866 ~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
...... ..+..+......+.+++.+|++.+|++||++.|+++
T Consensus 220 ~~~~~~--------~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 220 IGAHRG--------LMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred hhhccC--------CCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 100000 011122234556788999999999999999999875
No 246
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=4.8e-34 Score=308.11 Aligned_cols=249 Identities=27% Similarity=0.392 Sum_probs=202.2
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
..|+..+.||.|+||.||+|... +++.||||++... ........+.+|++++++++||||+++
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~----------------~~~~~~~~~~~e~~~l~~l~h~~i~~~ 67 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLE----------------EAEDEIEDIQQEITVLSQCDSPYVTKY 67 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecc----------------ccHHHHHHHHHHHHHHHhCCCCCEeeE
Confidence 45777888999999999999965 6889999987311 111234678899999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
++++..+...++||||+++++|.+++.. ..+++.....++.|++.|++|+| +.+++|+||+|+||+++.++.++
T Consensus 68 ~~~~~~~~~~~lv~e~~~~~~L~~~i~~---~~l~~~~~~~~~~~l~~~l~~lh---~~~ivH~dl~p~Nil~~~~~~~~ 141 (277)
T cd06640 68 YGSYLKGTKLWIIMEYLGGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLH---SEKKIHRDIKAANVLLSEQGDVK 141 (277)
T ss_pred EEEEEECCEEEEEEecCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---hCCccCcCCChhhEEEcCCCCEE
Confidence 9999999999999999999999999875 35788888999999999999999 89999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKM 867 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 867 (947)
++|||++........ ......++..|+|||++.+..++.++|+|||||++|||++|+.||..... ...... .
T Consensus 142 l~dfg~~~~~~~~~~--~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~-----~~~~~~-~ 213 (277)
T cd06640 142 LADFGVAGQLTDTQI--KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHP-----MRVLFL-I 213 (277)
T ss_pred EcccccceeccCCcc--ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcCh-----HhHhhh-h
Confidence 999999976543321 12234578899999999888899999999999999999999999853211 111100 0
Q ss_pred cccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 868 DSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 868 ~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
.....+......+..+.+++.+||+.+|++||++.+++++
T Consensus 214 ---------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 214 ---------PKNNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred ---------hcCCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 0011133445567789999999999999999999999875
No 247
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.5e-34 Score=340.25 Aligned_cols=263 Identities=22% Similarity=0.330 Sum_probs=199.0
Q ss_pred HHHhhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccc
Q 002250 625 KEIIDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVN 703 (947)
Q Consensus 625 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n 703 (947)
+...++|.+.+.||+|+||+||+|+.. +++.||+|.+.... ........+..|+.++++++|||
T Consensus 9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~---------------l~e~~~~~~~~EI~IL~~L~HPN 73 (1021)
T PTZ00266 9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRG---------------LKEREKSQLVIEVNVMRELKHKN 73 (1021)
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccc---------------cCHHHHHHHHHHHHHHHHcCCCC
Confidence 344578999999999999999999965 57889999884221 11123456889999999999999
Q ss_pred cceEEEEEec--CCccEEEEeccCCCChHHHhhhc--CCccCCHHHHHHHHHHHHHHHHHHhcCC----CCCeEeccCCC
Q 002250 704 VVKLYCSITS--EDSNLLVYEYLPNGSLWDRLHTC--HKIEMDWVVRYAIAVGAAKGLEYLHHGF----DRPVIHRDVKS 775 (947)
Q Consensus 704 iv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~~ia~~l~yLH~~~----~~~ivH~Dlkp 775 (947)
||+++++|.. ....|+||||+++|+|.+++... ....+++..++.|+.||+.||+|||... ..+||||||||
T Consensus 74 IVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKP 153 (1021)
T PTZ00266 74 IVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKP 153 (1021)
T ss_pred cCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcH
Confidence 9999998855 35578999999999999999763 2346899999999999999999999421 14699999999
Q ss_pred CCeEecC-----------------CCCeEEeccccceecccCCCCcceecccccccccCcccccc--CCCCCccchHHHH
Q 002250 776 SNILLDL-----------------EWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYT--CKINEKSDVYSFG 836 (947)
Q Consensus 776 ~NIll~~-----------------~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG 836 (947)
+|||++. .+.+||+|||++........ .....||+.|+|||++.. ..++.++||||||
T Consensus 154 eNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~---~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG 230 (1021)
T PTZ00266 154 QNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESM---AHSCVGTPYYWSPELLLHETKSYDDKSDMWALG 230 (1021)
T ss_pred HHeEeecCccccccccccccccCCCCceEEccCCcccccccccc---ccccCCCccccCHHHHhccCCCCCchhHHHHHH
Confidence 9999964 23489999999976543221 223468999999999854 4588999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHH--
Q 002250 837 VVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVV-- 914 (947)
Q Consensus 837 v~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~-- 914 (947)
|++|||++|+.||... ......... +..... ++ ....+..+.+++..||+.+|.+||++.|++
T Consensus 231 ~ILYELLTGk~PF~~~----~~~~qli~~-lk~~p~--------lp--i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h 295 (1021)
T PTZ00266 231 CIIYELCSGKTPFHKA----NNFSQLISE-LKRGPD--------LP--IKGKSKELNILIKNLLNLSAKERPSALQCLGY 295 (1021)
T ss_pred HHHHHHHHCCCCCCcC----CcHHHHHHH-HhcCCC--------CC--cCCCCHHHHHHHHHHhcCChhHCcCHHHHhcc
Confidence 9999999999998532 122222111 111110 00 012245688999999999999999999998
Q ss_pred HHhhcc
Q 002250 915 QMLEEA 920 (947)
Q Consensus 915 ~~L~~~ 920 (947)
..++..
T Consensus 296 ~~ik~i 301 (1021)
T PTZ00266 296 QIIKNV 301 (1021)
T ss_pred HHHhhc
Confidence 445433
No 248
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.6e-34 Score=312.13 Aligned_cols=258 Identities=26% Similarity=0.351 Sum_probs=204.2
Q ss_pred HhhccCCcccccccCceeEEEEEe-CCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccc
Q 002250 627 IIDAVKPENLIGKGGSGNVYKVVL-NSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVV 705 (947)
Q Consensus 627 ~~~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 705 (947)
..++|++.+.||+|+||.||+|.. .+++.||+|.+... .....+.+.+|+.+++.++||||+
T Consensus 17 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~-----------------~~~~~~~~~~e~~~l~~~~h~~i~ 79 (297)
T cd06656 17 PKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQ-----------------QQPKKELIINEILVMRENKNPNIV 79 (297)
T ss_pred hhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecC-----------------ccchHHHHHHHHHHHHhCCCCCEe
Confidence 347899999999999999999995 47999999988321 112345678999999999999999
Q ss_pred eEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCC
Q 002250 706 KLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWK 785 (947)
Q Consensus 706 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~ 785 (947)
++++++..++..++||||+++++|.+++.+ ..+++..+..++.|++.||+||| +.+++||||||+||+++.++.
T Consensus 80 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~l~~~L~~LH---~~~i~H~dL~p~Nili~~~~~ 153 (297)
T cd06656 80 NYLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALDFLH---SNQVIHRDIKSDNILLGMDGS 153 (297)
T ss_pred eEEEEEecCCEEEEeecccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCC
Confidence 999999999999999999999999999875 34788899999999999999999 899999999999999999999
Q ss_pred eEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHh
Q 002250 786 PRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYS 865 (947)
Q Consensus 786 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~ 865 (947)
++|+|||.+......... .....+++.|+|||...+..++.++|||||||++|||++|+.||....... ....
T Consensus 154 ~~l~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~-----~~~~ 226 (297)
T cd06656 154 VKLTDFGFCAQITPEQSK--RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR-----ALYL 226 (297)
T ss_pred EEECcCccceEccCCccC--cCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcch-----heee
Confidence 999999999765433221 123468899999999988889999999999999999999999995322110 0000
Q ss_pred hccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH--HhhccCC
Q 002250 866 KMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQ--MLEEAEP 922 (947)
Q Consensus 866 ~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~--~L~~~~~ 922 (947)
..... ......+......+.+++.+|++.+|++||++.++++ .++..++
T Consensus 227 ~~~~~--------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~ 277 (297)
T cd06656 227 IATNG--------TPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKP 277 (297)
T ss_pred eccCC--------CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhccccc
Confidence 00000 0001112234456788999999999999999999997 4444433
No 249
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=4.2e-34 Score=304.91 Aligned_cols=249 Identities=27% Similarity=0.368 Sum_probs=201.3
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
++|+..+.||+|+||.||+|... +++.+|+|.+... ...+.+.+|++++++++||||+++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~-------------------~~~~~~~~e~~~~~~l~~~~i~~~ 63 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVE-------------------EDLQEIIKEISILKQCDSPYIVKY 63 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecH-------------------HHHHHHHHHHHHHHhCCCCcEeee
Confidence 57888999999999999999976 4889999987311 115689999999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
++++..+...|+++||+++++|.+++... ...+++.....++.|++.|++||| ..+++||||+|+||+++.++.++
T Consensus 64 ~~~~~~~~~~~l~~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~ni~~~~~~~~~ 139 (256)
T cd06612 64 YGSYFKNTDLWIVMEYCGAGSVSDIMKIT-NKTLTEEEIAAILYQTLKGLEYLH---SNKKIHRDIKAGNILLNEEGQAK 139 (256)
T ss_pred eeeeecCCcEEEEEecCCCCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEECCCCcEE
Confidence 99999999999999999999999999753 346899999999999999999999 88999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKM 867 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 867 (947)
|+|||.+........ ......++..|+|||++.+..++.++||||||+++|||++|+.||...... +......
T Consensus 140 l~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~-----~~~~~~~ 212 (256)
T cd06612 140 LADFGVSGQLTDTMA--KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPM-----RAIFMIP 212 (256)
T ss_pred EcccccchhcccCcc--ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchh-----hhhhhhc
Confidence 999999986544321 122345788999999998888999999999999999999999998532111 0000000
Q ss_pred cccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 868 DSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 868 ~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
.. ..............+.+++.+|++.+|++|||+.|+++
T Consensus 213 ~~--------~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 213 NK--------PPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred cC--------CCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 00 00001112233456889999999999999999999986
No 250
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=5.5e-34 Score=310.33 Aligned_cols=249 Identities=25% Similarity=0.377 Sum_probs=200.1
Q ss_pred hccCCcccccccCceeEEEEEe-CCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVL-NSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
.+|+..+.||.|++|.||+|.. .+++.||+|.+... .......+.+|+.+++.++||||+++
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~-----------------~~~~~~~~~~e~~~l~~l~h~~iv~~ 81 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQ-----------------KQPKKELIINEILVMKELKNPNIVNF 81 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecc-----------------cCchHHHHHHHHHHHHhcCCCceeee
Confidence 5688889999999999999985 47899999988311 11234567899999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
++++..++..++|+||+++++|.+++.. ..+++..+..++.|++.|++||| +.+++||||||+||+++.++.++
T Consensus 82 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH---~~~i~H~dL~p~Nili~~~~~~k 155 (296)
T cd06655 82 LDSFLVGDELFVVMEYLAGGSLTDVVTE---TCMDEAQIAAVCRECLQALEFLH---ANQVIHRDIKSDNVLLGMDGSVK 155 (296)
T ss_pred eeeEecCceEEEEEEecCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEE
Confidence 9999999999999999999999999875 35799999999999999999999 89999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKM 867 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 867 (947)
|+|||++......... .....++..|+|||.+.+..++.++|||||||++|||++|+.||..... .+......
T Consensus 156 l~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~-----~~~~~~~~ 228 (296)
T cd06655 156 LTDFGFCAQITPEQSK--RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENP-----LRALYLIA 228 (296)
T ss_pred EccCccchhccccccc--CCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHH
Confidence 9999998765433221 1234688999999999888899999999999999999999999854321 11111111
Q ss_pred cccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 868 DSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 868 ~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
.... .....+......+.+++.+||..||++||++.++++
T Consensus 229 ~~~~--------~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 229 TNGT--------PELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred hcCC--------cccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 1000 001112233456788999999999999999999985
No 251
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=7e-34 Score=306.63 Aligned_cols=257 Identities=22% Similarity=0.315 Sum_probs=200.6
Q ss_pred hccCCcccccccCceeEEEEEeC------CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcccc
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN------SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHV 702 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 702 (947)
++|+..+.||+|+||+||+|+.+ +.+.||+|.+... ........+.+|++++++++|+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~----------------~~~~~~~~~~~E~~~l~~l~h~ 68 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKT----------------KDENLQSEFRRELDMFRKLSHK 68 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCc----------------cchHHHHHHHHHHHHHHhcCCc
Confidence 56888899999999999999964 2467999977211 0111246788999999999999
Q ss_pred ccceEEEEEecCCccEEEEeccCCCChHHHhhhcCC-------ccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCC
Q 002250 703 NVVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHK-------IEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKS 775 (947)
Q Consensus 703 niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-------~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp 775 (947)
||+++++++.+.+..++||||+++|+|.+++..... ..+++..++.++.|++.||+||| +.+|+||||||
T Consensus 69 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dlkp 145 (275)
T cd05046 69 NVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLS---NARFVHRDLAA 145 (275)
T ss_pred ceeeeEEEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhh---hcCcccCcCcc
Confidence 999999999999999999999999999999986541 25899999999999999999999 89999999999
Q ss_pred CCeEecCCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCC
Q 002250 776 SNILLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFG 854 (947)
Q Consensus 776 ~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~ 854 (947)
+||+++.++.++++|||++......... ......++..|+|||.+.+..++.++||||||+++|||++ |..||....
T Consensus 146 ~Nili~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~- 223 (275)
T cd05046 146 RNCLVSSQREVKVSLLSLSKDVYNSEYY-KLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLS- 223 (275)
T ss_pred ceEEEeCCCcEEEcccccccccCccccc-ccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccc-
Confidence 9999999999999999998654322211 1123346778999999988888999999999999999999 778874321
Q ss_pred CcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhc
Q 002250 855 DSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEE 919 (947)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~ 919 (947)
....... ....... .......+..+.+++.+|++.+|++|||+.|++++|++
T Consensus 224 -~~~~~~~---~~~~~~~---------~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~ 275 (275)
T cd05046 224 -DEEVLNR---LQAGKLE---------LPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE 275 (275)
T ss_pred -hHHHHHH---HHcCCcC---------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence 1111111 1111100 00111234578899999999999999999999998863
No 252
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=3.1e-34 Score=305.93 Aligned_cols=251 Identities=24% Similarity=0.368 Sum_probs=201.7
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
+|+..+.||+|+||.||+|... +++.+|||++.... ........+.+|++++++++||||++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~---------------~~~~~~~~~~~e~~~l~~~~~~~i~~~~ 65 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQ---------------MTKDERLAAQNECQVLKLLSHPNIIEYY 65 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccc---------------cccHHHHHHHHHHHHHhhCCCCchhhee
Confidence 4778899999999999999964 68899999984221 1112346788999999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCC-CCeE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLE-WKPR 787 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~-~~~k 787 (947)
+.+..++..++||||+++++|.+++.......+++..+..++.+++.|++||| +++++||||+|+||+++++ +.++
T Consensus 66 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~~ 142 (256)
T cd08220 66 ENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVH---TKLILHRDLKTQNILLDKHKMVVK 142 (256)
T ss_pred eeEecCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEE
Confidence 99999999999999999999999998765566899999999999999999999 8999999999999999865 4589
Q ss_pred EeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKM 867 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 867 (947)
++|||.+........ .....++..|+|||.+....++.++||||||+++|||++|+.||... +.........
T Consensus 143 l~d~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~-----~~~~~~~~~~ 214 (256)
T cd08220 143 IGDFGISKILSSKSK---AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAA-----NLPALVLKIM 214 (256)
T ss_pred EccCCCceecCCCcc---ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccC-----chHHHHHHHH
Confidence 999999986644322 12346789999999998888899999999999999999999998432 1222221111
Q ss_pred cccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 868 DSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 868 ~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
.. ...+.+...+..+.+++.+||+.+|++|||+.|++++
T Consensus 215 ~~----------~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 215 SG----------TFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred hc----------CCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 11 1111222345568899999999999999999999864
No 253
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=3.1e-34 Score=307.57 Aligned_cols=253 Identities=28% Similarity=0.382 Sum_probs=204.2
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
+|+..+.||+|+||.||+|..+ +++.||+|++.... ......++.+|++++++++||||++++
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~----------------~~~~~~~~~~e~~~l~~~~~~~i~~~~ 65 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEI----------------NEAIQKQILRELDILHKCNSPYIVGFY 65 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEeccc----------------ChHHHHHHHHHHHHHHHCCCCchhhhh
Confidence 5777889999999999999976 68999999884211 113345688999999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCC-CCeEeccCCCCCeEecCCCCeE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFD-RPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~-~~ivH~Dlkp~NIll~~~~~~k 787 (947)
+++..+...++|+||+++++|.+++.... ..++......++.|++.|++||| + .+++||||||+||++++++.++
T Consensus 66 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH---~~~~i~H~dl~~~ni~~~~~~~~~ 141 (265)
T cd06605 66 GAFYNNGDISICMEYMDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLH---EKHKIIHRDVKPSNILVNSRGQIK 141 (265)
T ss_pred eeeecCCEEEEEEEecCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHc---CCCCeecCCCCHHHEEECCCCCEE
Confidence 99999999999999999999999998643 56888899999999999999999 7 8999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKM 867 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 867 (947)
|+|||.+......... ...++..|+|||++.+..++.++||||||+++|||++|+.||...........+......
T Consensus 142 l~d~g~~~~~~~~~~~----~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 217 (265)
T cd06605 142 LCDFGVSGQLVNSLAK----TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIV 217 (265)
T ss_pred EeecccchhhHHHHhh----cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHh
Confidence 9999998755332211 156888999999999889999999999999999999999998654333333333332222
Q ss_pred cccccccccccCCCCccCHH-HHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 868 DSRDSMLTVVDPNISEILKE-DALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 868 ~~~~~~~~~~d~~~~~~~~~-~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
... .+..... ....+.+++.+|+..+|++|||+.+++++
T Consensus 218 ~~~----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 218 NEP----------PPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred cCC----------CCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 111 1111222 45568899999999999999999999853
No 254
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.6e-34 Score=319.07 Aligned_cols=191 Identities=25% Similarity=0.283 Sum_probs=163.5
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
..|++.+.||+|+||.||+|+.. +++.||+|+.. ......|+.++++++||||+++
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~-----------------------~~~~~~E~~~l~~l~h~~iv~~ 122 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQ-----------------------KGTTLIEAMLLQNVNHPSVIRM 122 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCC-----------------------ccccHHHHHHHHhCCCCCCcCh
Confidence 46889999999999999999966 57889999641 1123469999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
++++..+...++||||+ .++|.+++... ...+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+|
T Consensus 123 ~~~~~~~~~~~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~k 197 (357)
T PHA03209 123 KDTLVSGAITCMVLPHY-SSDLYTYLTKR-SRPLPIDQALIIEKQILEGLRYLH---AQRIIHRDVKTENIFINDVDQVC 197 (357)
T ss_pred hheEEeCCeeEEEEEcc-CCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEE
Confidence 99999999999999999 56888888763 346899999999999999999999 89999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCC
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIV 850 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~ 850 (947)
|+|||.++...... ......||+.|+|||++.+..++.++|||||||++|||+++..|+.
T Consensus 198 l~DfG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f 257 (357)
T PHA03209 198 IGDLGAAQFPVVAP---AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIF 257 (357)
T ss_pred EecCccccccccCc---ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccc
Confidence 99999997533221 1223468999999999999899999999999999999999766553
No 255
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=5.3e-34 Score=304.39 Aligned_cols=252 Identities=27% Similarity=0.385 Sum_probs=200.5
Q ss_pred cCCcccccccCceeEEEEEeCC-----CcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccc
Q 002250 631 VKPENLIGKGGSGNVYKVVLNS-----GKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVV 705 (947)
Q Consensus 631 ~~~~~~iG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 705 (947)
+.+.+.||+|+||.||+|...+ +..||+|++..... ......+..|+++++.++|+||+
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~----------------~~~~~~~~~e~~~l~~l~~~~i~ 64 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDAD----------------EQQIEEFLREARIMRKLDHPNIV 64 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCC----------------hHHHHHHHHHHHHHHhcCCCchh
Confidence 3567889999999999999663 38899998842210 11456788999999999999999
Q ss_pred eEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCC
Q 002250 706 KLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWK 785 (947)
Q Consensus 706 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~ 785 (947)
++++++...+..+++|||+++++|.+++.......+++..+..++.|++.|++||| +.+++||||+|+||++++++.
T Consensus 65 ~~~~~~~~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh---~~~~~h~dl~~~nil~~~~~~ 141 (258)
T smart00219 65 KLLGVCTEEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLE---SKNFIHRDLAARNCLVGENLV 141 (258)
T ss_pred eEEEEEcCCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHh---cCCeeecccccceEEEccCCe
Confidence 99999999999999999999999999998754433899999999999999999999 899999999999999999999
Q ss_pred eEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHH
Q 002250 786 PRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNWVY 864 (947)
Q Consensus 786 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~ 864 (947)
++|+|||++............ ...+++.|+|||.+.+..++.++||||+|+++|||++ |..||... .......
T Consensus 142 ~~l~dfg~~~~~~~~~~~~~~-~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~-----~~~~~~~ 215 (258)
T smart00219 142 VKISDFGLSRDLYDDDYYKKK-GGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGM-----SNEEVLE 215 (258)
T ss_pred EEEcccCCceecccccccccc-cCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC-----CHHHHHH
Confidence 999999999876654332221 2236789999999988889999999999999999999 77777431 1111111
Q ss_pred hhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 002250 865 SKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQML 917 (947)
Q Consensus 865 ~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L 917 (947)
...... ........+..+.+++.+|++.+|++|||+.|+++.|
T Consensus 216 ~~~~~~----------~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 216 YLKKGY----------RLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred HHhcCC----------CCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 111111 1111222456788999999999999999999998864
No 256
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=4.9e-34 Score=307.15 Aligned_cols=239 Identities=22% Similarity=0.319 Sum_probs=183.1
Q ss_pred cccccCceeEEEEEeCC-------------------------CcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHH
Q 002250 636 LIGKGGSGNVYKVVLNS-------------------------GKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYD 690 (947)
Q Consensus 636 ~iG~G~~g~Vy~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (947)
.||+|+||.||+|.+.. ...||+|++... ......++.
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~-----------------~~~~~~~~~ 64 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPS-----------------HRDIALAFF 64 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChH-----------------HHHHHHHHH
Confidence 58999999999997421 134778876211 112235688
Q ss_pred HHHHHHhhccccccceEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEe
Q 002250 691 AEVATLSAVRHVNVVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIH 770 (947)
Q Consensus 691 ~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH 770 (947)
+|+.++++++||||+++++++..+...++||||+++|+|.+++... ...+++..+..++.|+++||+||| +.+|+|
T Consensus 65 ~~~~~~~~l~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH 140 (274)
T cd05076 65 ETASLMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKE-KGRVPVAWKITVAQQLASALSYLE---DKNLVH 140 (274)
T ss_pred HHHHHHhcCCCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---cCCccC
Confidence 8999999999999999999999999999999999999999998753 345788889999999999999999 899999
Q ss_pred ccCCCCCeEecCCC-------CeEEeccccceecccCCCCcceecccccccccCcccccc-CCCCCccchHHHHHHHHHH
Q 002250 771 RDVKSSNILLDLEW-------KPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYT-CKINEKSDVYSFGVVLMEL 842 (947)
Q Consensus 771 ~Dlkp~NIll~~~~-------~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~el 842 (947)
|||||+||+++..+ .++++|||.+....... ...++..|+|||.+.+ ..++.++||||||+++|||
T Consensus 141 ~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~~------~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el 214 (274)
T cd05076 141 GNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSRE------ERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEI 214 (274)
T ss_pred CCCCcccEEEeccCcccCccceeeecCCcccccccccc------ccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHH
Confidence 99999999997643 37999999886432211 2356788999998865 5688999999999999999
Q ss_pred H-hCCCCCCCCCCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 002250 843 V-TGKRPIVPEFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLE 918 (947)
Q Consensus 843 l-tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~ 918 (947)
+ +|+.||..... .....+.. ... .. +......+.+++.+||+.+|++|||+.++++.|.
T Consensus 215 ~~~g~~p~~~~~~--~~~~~~~~----~~~--------~~---~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 215 CFDGEVPLKERTP--SEKERFYE----KKH--------RL---PEPSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred HhCCCCCccccCh--HHHHHHHH----hcc--------CC---CCCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 5 68888853211 11111111 000 01 1111245888999999999999999999999874
No 257
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=1.8e-34 Score=323.35 Aligned_cols=204 Identities=26% Similarity=0.386 Sum_probs=172.6
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
+.|+..+.||+|+||+||+|+.. +++.||||++... ..........+.+|+.++..++||+|+++
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~--------------~~~~~~~~~~~~~e~~~l~~l~~~~iv~~ 66 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKA--------------DMLEKEQVAHIRAERDILVEADGAWVVKM 66 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHH--------------HHhhhhhHHHHHHHHHHHHhCCCCCEeeE
Confidence 35788899999999999999965 6899999998311 01112345678889999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
++++.+++..|+||||+++|+|.+++... ..+++.....++.|++.||+||| +.+|+||||||+||+++.++.++
T Consensus 67 ~~~~~~~~~~~lv~E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~~L~~lH---~~givHrDLkp~NIli~~~~~vk 141 (360)
T cd05627 67 FYSFQDKRNLYLIMEFLPGGDMMTLLMKK--DTLSEEATQFYIAETVLAIDAIH---QLGFIHRDIKPDNLLLDAKGHVK 141 (360)
T ss_pred EEEEEcCCEEEEEEeCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEE
Confidence 99999999999999999999999999764 35788889999999999999999 89999999999999999999999
Q ss_pred EeccccceecccCCCC---------------------------------cceecccccccccCccccccCCCCCccchHH
Q 002250 788 IADFGLAKIVQTGEAG---------------------------------DLTHVIAGTHGYIAPEYAYTCKINEKSDVYS 834 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s 834 (947)
|+|||++......... ......+||+.|+|||++.+..++.++||||
T Consensus 142 L~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwS 221 (360)
T cd05627 142 LSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWS 221 (360)
T ss_pred EeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceecc
Confidence 9999998744321100 0011346999999999999989999999999
Q ss_pred HHHHHHHHHhCCCCCCC
Q 002250 835 FGVVLMELVTGKRPIVP 851 (947)
Q Consensus 835 lGv~l~elltg~~p~~~ 851 (947)
|||++|||++|+.||..
T Consensus 222 lGvilyel~tG~~Pf~~ 238 (360)
T cd05627 222 LGVIMYEMLIGYPPFCS 238 (360)
T ss_pred ccceeeecccCCCCCCC
Confidence 99999999999999953
No 258
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=8.8e-34 Score=304.43 Aligned_cols=257 Identities=29% Similarity=0.424 Sum_probs=203.6
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
++|++.+.||.|+||+||+|... ++..+|+|++..+. .......+.+|+++++.++|+||+++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~----------------~~~~~~~~~~e~~~l~~l~~~~i~~~ 64 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEK----------------CQTSVDELRKEVQAMSQCNHPNVVKY 64 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCC----------------cchHHHHHHHHHHHHHhcCCCCEEEE
Confidence 46888999999999999999954 68899999883211 11244678899999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCC-ccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCe
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHK-IEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKP 786 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 786 (947)
++.+..++..++||||+++++|.++++.... ..+++.....++.|++.|++||| +.+++||||+|+||++++++.+
T Consensus 65 ~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh---~~~i~h~~l~p~ni~~~~~~~~ 141 (267)
T cd06610 65 YTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLH---SNGQIHRDIKAGNILLGEDGSV 141 (267)
T ss_pred EEEEeeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCE
Confidence 9999999999999999999999999986433 56899999999999999999999 8999999999999999999999
Q ss_pred EEeccccceecccCCCCc--ceecccccccccCccccccC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHH
Q 002250 787 RIADFGLAKIVQTGEAGD--LTHVIAGTHGYIAPEYAYTC-KINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWV 863 (947)
Q Consensus 787 kl~DfG~a~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~ 863 (947)
+|+|||++.......... ......|+..|+|||++... .++.++|+|||||++|||++|+.||..... .....+.
T Consensus 142 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~-~~~~~~~- 219 (267)
T cd06610 142 KIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPP-MKVLMLT- 219 (267)
T ss_pred EEcccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccCh-hhhHHHH-
Confidence 999999987665433221 22334688999999998877 788999999999999999999999853211 1111111
Q ss_pred HhhccccccccccccCCCCcc--CHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 864 YSKMDSRDSMLTVVDPNISEI--LKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 864 ~~~~~~~~~~~~~~d~~~~~~--~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
..... +.+... .......+.+++.+|++.||++||++.+++++
T Consensus 220 ---~~~~~-------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 220 ---LQNDP-------PSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred ---hcCCC-------CCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 11110 111111 12344668899999999999999999999863
No 259
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=1.4e-33 Score=303.33 Aligned_cols=263 Identities=25% Similarity=0.371 Sum_probs=202.7
Q ss_pred ccCCcccccccCceeEEEEEeCC--CcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhh-ccccccce
Q 002250 630 AVKPENLIGKGGSGNVYKVVLNS--GKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSA-VRHVNVVK 706 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~ 706 (947)
.|++.+.||+|+||.||+|.... ++.+|||.+......... ..........++.+|+.++.+ ++||||++
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~-------~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~ 73 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGK-------DKRERDKSIGDIVSEVTIIKEQLRHPNIVR 73 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeecccccccc-------ccccchHHHHHHHHHHHHHhhcCCCCCeee
Confidence 36778899999999999999764 788999988433221110 001122334567788888875 79999999
Q ss_pred EEEEEecCCccEEEEeccCCCChHHHhhhc--CCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCC
Q 002250 707 LYCSITSEDSNLLVYEYLPNGSLWDRLHTC--HKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEW 784 (947)
Q Consensus 707 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~ 784 (947)
+++++..++..++||||+++++|.+++... ....+++..++.++.|++.|+.|||+ ..+++||||+|+||+++.++
T Consensus 74 ~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~--~~~i~H~dl~~~nil~~~~~ 151 (269)
T cd08528 74 YYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHK--EKRIVHRDLTPNNIMLGEDD 151 (269)
T ss_pred EEeeEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhcc--CCceeecCCCHHHEEECCCC
Confidence 999999999999999999999999988542 34568899999999999999999993 36899999999999999999
Q ss_pred CeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 002250 785 KPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVY 864 (947)
Q Consensus 785 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~ 864 (947)
.++|+|||.+....... ......|+..|+|||+..+..++.++||||||+++|||++|+.||... +......
T Consensus 152 ~~~l~dfg~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~-----~~~~~~~ 223 (269)
T cd08528 152 KVTITDFGLAKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYST-----NMLSLAT 223 (269)
T ss_pred cEEEecccceeeccccc---ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCccccc-----CHHHHHH
Confidence 99999999998654432 223446889999999999888999999999999999999999998432 2222211
Q ss_pred hhccccccccccccCCCCccC-HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhc
Q 002250 865 SKMDSRDSMLTVVDPNISEIL-KEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEE 919 (947)
Q Consensus 865 ~~~~~~~~~~~~~d~~~~~~~-~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~ 919 (947)
...... ..+.. ......+.+++.+|++.||++||++.|+.+++++
T Consensus 224 ~~~~~~----------~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~~ 269 (269)
T cd08528 224 KIVEAV----------YEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMISD 269 (269)
T ss_pred HHhhcc----------CCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhcC
Confidence 111111 01111 1234568899999999999999999999999864
No 260
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=4.2e-34 Score=308.04 Aligned_cols=257 Identities=25% Similarity=0.338 Sum_probs=196.7
Q ss_pred cCCcccccccCceeEEEEEeC----CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccce
Q 002250 631 VKPENLIGKGGSGNVYKVVLN----SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVK 706 (947)
Q Consensus 631 ~~~~~~iG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 706 (947)
|++.+.||+|+||+||+|... +++.||||++.... ......+++.+|++++++++||||++
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~---------------~~~~~~~~~~~E~~~l~~l~h~~i~~ 65 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADI---------------FSSSDIEEFLREAACMKEFDHPNVIK 65 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEecccc---------------CChHHHHHHHHHHHHHhcCCCCCcce
Confidence 567789999999999999854 36889999884211 11123456889999999999999999
Q ss_pred EEEEEecCC------ccEEEEeccCCCChHHHhhhc----CCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCC
Q 002250 707 LYCSITSED------SNLLVYEYLPNGSLWDRLHTC----HKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSS 776 (947)
Q Consensus 707 l~~~~~~~~------~~~lv~e~~~~gsL~~~l~~~----~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~ 776 (947)
+++++.... ..++++||+++|+|.+++... ....+++.....++.|++.|++||| +.+|+||||||+
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~ 142 (273)
T cd05074 66 LIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLS---SKNFIHRDLAAR 142 (273)
T ss_pred EEEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccchh
Confidence 999886532 237899999999999887532 1235788899999999999999999 889999999999
Q ss_pred CeEecCCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCC
Q 002250 777 NILLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGD 855 (947)
Q Consensus 777 NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~ 855 (947)
||+++.++.+|++|||.++...............+++.|++||.+....++.++||||||+++|||++ |+.||....
T Consensus 143 nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~-- 220 (273)
T cd05074 143 NCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVE-- 220 (273)
T ss_pred hEEEcCCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCC--
Confidence 99999999999999999986543322211222345678999999988889999999999999999999 888874321
Q ss_pred cccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 002250 856 SKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEA 920 (947)
Q Consensus 856 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 920 (947)
..++..+.. .... ..........+.+++.+|++.+|++||++.++++.|+++
T Consensus 221 ~~~~~~~~~---~~~~----------~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 221 NSEIYNYLI---KGNR----------LKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred HHHHHHHHH---cCCc----------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 112222111 1110 001122345788999999999999999999999999875
No 261
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=8.5e-34 Score=307.14 Aligned_cols=251 Identities=22% Similarity=0.275 Sum_probs=195.9
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
.|++.+.||+|+||.||+|... ++..+|+|.+... .......+.+|+++++.++||||++++
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~-----------------~~~~~~~~~~e~~~l~~l~h~~ii~~~ 68 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK-----------------SEEELEDYMVEIDILASCDHPNIVKLL 68 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC-----------------CHHHHHHHHHHHHHHHHCCCCCeeeEE
Confidence 3677888999999999999966 5788899987311 112345688899999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRI 788 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 788 (947)
+++..++..++||||+++++|.+++... ...+++..+..++.|++.||+||| +.+++||||||+||+++.++.+++
T Consensus 69 ~~~~~~~~~~~v~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~qi~~~L~~LH---~~~i~H~dlkp~nili~~~~~~kl 144 (282)
T cd06643 69 DAFYYENNLWILIEFCAGGAVDAVMLEL-ERPLTEPQIRVVCKQTLEALNYLH---ENKIIHRDLKAGNILFTLDGDIKL 144 (282)
T ss_pred EEEeeCCEEEEEEEecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEccCCCEEE
Confidence 9999999999999999999999988652 346899999999999999999999 899999999999999999999999
Q ss_pred eccccceecccCCCCcceecccccccccCccccc-----cCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHH
Q 002250 789 ADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAY-----TCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWV 863 (947)
Q Consensus 789 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~ 863 (947)
+|||++....... .......++..|+|||++. ...++.++|||||||++|||++|+.||.... ..+..
T Consensus 145 ~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~-----~~~~~ 217 (282)
T cd06643 145 ADFGVSAKNTRTI--QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELN-----PMRVL 217 (282)
T ss_pred ccccccccccccc--cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccC-----HHHHH
Confidence 9999987543221 1122346899999999974 3457789999999999999999999984321 11111
Q ss_pred HhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 864 YSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 864 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
......... . ...+...+..+.+++.+||+.+|.+||++.+++++
T Consensus 218 ~~~~~~~~~-------~-~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 218 LKIAKSEPP-------T-LAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred HHHhhcCCC-------C-CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111111100 0 01112234568899999999999999999998864
No 262
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=1.6e-33 Score=301.50 Aligned_cols=253 Identities=26% Similarity=0.343 Sum_probs=201.3
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
++|++.+.||+|+||.||+|... +++.+|+|++... .......+.+|++++++++||||+++
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~-----------------~~~~~~~~~~e~~~l~~~~h~~i~~~ 65 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLE-----------------PGDDFEIIQQEISMLKECRHPNIVAY 65 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcC-----------------chhhHHHHHHHHHHHHhCCCCChhce
Confidence 57888899999999999999965 6788999998421 11245678899999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
++++..++..+++|||+++++|.+++... ...+++..+..++.|++.|++||| +.+++||||+|+||++++++.++
T Consensus 66 ~~~~~~~~~~~l~~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~ 141 (262)
T cd06613 66 FGSYLRRDKLWIVMEYCGGGSLQDIYQVT-RGPLSELQIAYVCRETLKGLAYLH---ETGKIHRDIKGANILLTEDGDVK 141 (262)
T ss_pred EEEEEeCCEEEEEEeCCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHH---hCCceecCCChhhEEECCCCCEE
Confidence 99999999999999999999999998763 245889999999999999999999 89999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccccC---CCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTC---KINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVY 864 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~ 864 (947)
|+|||.+........ ......++..|+|||.+... .++.++||||||+++|||++|+.||..... .....
T Consensus 142 l~d~g~~~~~~~~~~--~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~-----~~~~~ 214 (262)
T cd06613 142 LADFGVSAQLTATIA--KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHP-----MRALF 214 (262)
T ss_pred ECccccchhhhhhhh--ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCH-----HHHHH
Confidence 999999876543221 11234678899999998776 788999999999999999999999853211 11111
Q ss_pred hhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 865 SKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 865 ~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
...... ..+.........+..+.+++.+||..+|.+|||+.++++
T Consensus 215 ~~~~~~------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 215 LISKSN------FPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred HHHhcc------CCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 111000 001111122344567899999999999999999999975
No 263
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3.7e-34 Score=307.32 Aligned_cols=254 Identities=23% Similarity=0.312 Sum_probs=197.6
Q ss_pred hhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccce
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVK 706 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 706 (947)
.++|++.+.||+|+||.||+|+.. +++.||+|.+.... ......+.+|+.+++.++||||++
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~-----------------~~~~~~~~~e~~~~~~l~h~~ii~ 70 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP-----------------GEDFAVVQQEIIMMKDCKHSNIVA 70 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc-----------------hhHHHHHHHHHHHHHhCCCCCeee
Confidence 457888899999999999999954 68999999883211 122345778999999999999999
Q ss_pred EEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCe
Q 002250 707 LYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKP 786 (947)
Q Consensus 707 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 786 (947)
+++++..++..++||||+++++|.+++... ..+++.....++.|++.|++||| +.+++|+||||+||+++.++.+
T Consensus 71 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~ 145 (267)
T cd06645 71 YFGSYLRRDKLWICMEFCGGGSLQDIYHVT--GPLSESQIAYVSRETLQGLYYLH---SKGKMHRDIKGANILLTDNGHV 145 (267)
T ss_pred EEEEEEeCCEEEEEEeccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCE
Confidence 999999999999999999999999998764 35789999999999999999999 8899999999999999999999
Q ss_pred EEeccccceecccCCCCcceecccccccccCccccc---cCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHH
Q 002250 787 RIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAY---TCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWV 863 (947)
Q Consensus 787 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~ 863 (947)
+|+|||.+....... .......|+..|+|||++. ...++.++||||+||++|||++|+.||...... ...
T Consensus 146 ~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~-~~~---- 218 (267)
T cd06645 146 KLADFGVSAQITATI--AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPM-RAL---- 218 (267)
T ss_pred EECcceeeeEccCcc--cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccch-hhH----
Confidence 999999987654321 1122446899999999874 455888999999999999999999998532211 000
Q ss_pred HhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 864 YSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 864 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
......... .+.... ....+..+.+++.+|++.+|++||++.+++++
T Consensus 219 ~~~~~~~~~-----~~~~~~-~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 219 FLMTKSNFQ-----PPKLKD-KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred HhhhccCCC-----CCcccc-cCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence 000000000 001100 01123457889999999999999999998763
No 264
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=2.5e-34 Score=318.34 Aligned_cols=243 Identities=24% Similarity=0.273 Sum_probs=184.4
Q ss_pred ccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc---cccccceEEEEEe
Q 002250 637 IGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV---RHVNVVKLYCSIT 712 (947)
Q Consensus 637 iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~ 712 (947)
||+|+||+||+|+.. +++.||||++.... .........+..|..++.+. +||||+++++++.
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~--------------~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~ 66 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKE--------------IVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQ 66 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHH--------------HhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEe
Confidence 699999999999965 68999999983110 01112233455677777665 6999999999999
Q ss_pred cCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEeccc
Q 002250 713 SEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFG 792 (947)
Q Consensus 713 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 792 (947)
.+...|+||||+++|+|.+++... ..+++.....++.||+.||+||| +.+|+||||||+||+++.++.++|+|||
T Consensus 67 ~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qil~al~~LH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg 141 (330)
T cd05586 67 TDSDLYLVTDYMSGGELFWHLQKE--GRFSEDRAKFYIAELVLALEHLH---KYDIVYRDLKPENILLDATGHIALCDFG 141 (330)
T ss_pred cCCeEEEEEcCCCCChHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEecCC
Confidence 999999999999999999998763 45788999999999999999999 8999999999999999999999999999
Q ss_pred cceecccCCCCcceecccccccccCccccccC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhccccc
Q 002250 793 LAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTC-KINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDSRD 871 (947)
Q Consensus 793 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 871 (947)
+++....... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||... +..+..........
T Consensus 142 ~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~-----~~~~~~~~i~~~~~ 214 (330)
T cd05586 142 LSKANLTDNK--TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAE-----DTQQMYRNIAFGKV 214 (330)
T ss_pred cCcCCCCCCC--CccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCC-----CHHHHHHHHHcCCC
Confidence 9875332221 12245699999999998765 4789999999999999999999998532 12221111111111
Q ss_pred cccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCC----HHHHHH
Q 002250 872 SMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPS----MRVVVQ 915 (947)
Q Consensus 872 ~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt----~~ev~~ 915 (947)
.++. ......+.+++.+|++.||.+||+ +.++++
T Consensus 215 --------~~~~--~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 215 --------RFPK--NVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred --------CCCC--ccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 1111 112345678899999999999985 555544
No 265
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=5.1e-34 Score=317.90 Aligned_cols=263 Identities=20% Similarity=0.242 Sum_probs=194.3
Q ss_pred HHhhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcccccc
Q 002250 626 EIIDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNV 704 (947)
Q Consensus 626 ~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 704 (947)
++.++|++.+.||+|+||+||+|... +++.||||++.... ........+.+|+.++++++||||
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---------------~~~~~~~~~~~E~~~l~~l~h~~i 76 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPF---------------QSLIHARRTYRELRLLKHMKHENV 76 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchh---------------hhhHHHHHHHHHHHHHHhcCCCch
Confidence 34578999999999999999999954 68899999883211 011233557789999999999999
Q ss_pred ceEEEEEecC------CccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCe
Q 002250 705 VKLYCSITSE------DSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNI 778 (947)
Q Consensus 705 v~l~~~~~~~------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NI 778 (947)
+++++++... ...|+++|++ +++|.+++.. ..+++..+..++.|++.||+||| +.+|+||||||+||
T Consensus 77 v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrdikp~Ni 149 (343)
T cd07878 77 IGLLDVFTPATSIENFNEVYLVTNLM-GADLNNIVKC---QKLSDEHVQFLIYQLLRGLKYIH---SAGIIHRDLKPSNV 149 (343)
T ss_pred hhhhhhhcccccccccCcEEEEeecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeecccCChhhE
Confidence 9999887543 3468999998 7899888764 35889999999999999999999 89999999999999
Q ss_pred EecCCCCeEEeccccceecccCCCCcceecccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcc
Q 002250 779 LLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYT-CKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSK 857 (947)
Q Consensus 779 ll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~ 857 (947)
+++.++.+||+|||+++..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ..
T Consensus 150 l~~~~~~~kl~Dfg~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-~~ 223 (343)
T cd07878 150 AVNEDCELRILDFGLARQADDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDY-ID 223 (343)
T ss_pred EECCCCCEEEcCCccceecCCC-----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCH-HH
Confidence 9999999999999999865432 123468999999999876 4688999999999999999999999853210 01
Q ss_pred cHHHHHHhhcccccc----------------ccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 858 DIVNWVYSKMDSRDS----------------MLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 858 ~~~~~~~~~~~~~~~----------------~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
.+..+.......... +.......+..........+.+++.+|++.||++|||+.|++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 224 QLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred HHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 111111000000000 00000000001111123357799999999999999999999965
No 266
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=1.7e-33 Score=306.44 Aligned_cols=252 Identities=23% Similarity=0.308 Sum_probs=197.5
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
+.|++.+.||+|+||.||+|+.. +++.||+|++... .....+.+.+|+.++++++||||+++
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~-----------------~~~~~~~~~~e~~~l~~l~h~~i~~~ 74 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK-----------------SEEELEDYMVEIEILATCNHPYIVKL 74 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC-----------------CHHHHHHHHHHHHHHHhCCCCcEeee
Confidence 56889999999999999999965 5899999987311 11234668889999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
++++..++..++||||+++++|..++... ...+++..+..++.|++.|++||| +.+++||||||+||+++.++.++
T Consensus 75 ~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~k 150 (292)
T cd06644 75 LGAFYWDGKLWIMIEFCPGGAVDAIMLEL-DRGLTEPQIQVICRQMLEALQYLH---SMKIIHRDLKAGNVLLTLDGDIK 150 (292)
T ss_pred EEEEEeCCeEEEEEecCCCCcHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHh---cCCeeecCCCcceEEEcCCCCEE
Confidence 99999999999999999999998887653 245899999999999999999999 89999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccc-----cCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHH
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAY-----TCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNW 862 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~ 862 (947)
|+|||.+....... .......+++.|+|||++. ...++.++|||||||++|||++|+.||.... ..+.
T Consensus 151 l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~-----~~~~ 223 (292)
T cd06644 151 LADFGVSAKNVKTL--QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN-----PMRV 223 (292)
T ss_pred EccCccceeccccc--cccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCcccc-----HHHH
Confidence 99999987543221 1122345788999999984 3446789999999999999999999984321 1111
Q ss_pred HHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 863 VYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 863 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
......... +. ...+......+.+++.+||+.+|++||++.+++++
T Consensus 224 ~~~~~~~~~-------~~-~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 224 LLKIAKSEP-------PT-LSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred HHHHhcCCC-------cc-CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 111111110 00 01122334568889999999999999999999863
No 267
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-35 Score=343.02 Aligned_cols=254 Identities=28% Similarity=0.402 Sum_probs=205.4
Q ss_pred hccCCcccccccCceeEEEEE-eCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVV-LNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
-++.-..+||.|.||.||-|. ..+|.-.|||.+.... ..........+|+.++..++|||+|++
T Consensus 1235 ~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~---------------~~~k~~~~i~eEm~vlE~lnHpNlV~Y 1299 (1509)
T KOG4645|consen 1235 FRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQD---------------SDHKTFKLIAEEMKVLEGLNHPNLVRY 1299 (1509)
T ss_pred eeeccccccCCcceeeeEEeecCCccchhhhhhhhcCc---------------cccccCcchHHHHHHHHhccCcccccc
Confidence 356677899999999999999 4578899999874211 113445677899999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
||+-.+.+..+|.||||++|+|.+.+... .-.++.....+..|++.|++||| +.+||||||||.||+++.+|.+|
T Consensus 1300 yGVEvHRekv~IFMEyC~~GsLa~ll~~g--ri~dE~vt~vyt~qll~gla~LH---~~gIVHRDIK~aNI~Ld~~g~iK 1374 (1509)
T KOG4645|consen 1300 YGVEVHREKVYIFMEYCEGGSLASLLEHG--RIEDEMVTRVYTKQLLEGLAYLH---EHGIVHRDIKPANILLDFNGLIK 1374 (1509)
T ss_pred CceeecHHHHHHHHHHhccCcHHHHHHhc--chhhhhHHHHHHHHHHHHHHHHH---hcCceecCCCccceeeecCCcEE
Confidence 99999999999999999999999999863 33667777778889999999999 89999999999999999999999
Q ss_pred EeccccceecccCCC--CcceecccccccccCccccccCC---CCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHH
Q 002250 788 IADFGLAKIVQTGEA--GDLTHVIAGTHGYIAPEYAYTCK---INEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNW 862 (947)
Q Consensus 788 l~DfG~a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~ 862 (947)
++|||.|........ ........||+.|||||++.+.. ..-+.||||+|||+.||+||++||.... + +|
T Consensus 1375 ~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~d----n--e~ 1448 (1509)
T KOG4645|consen 1375 YGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELD----N--EW 1448 (1509)
T ss_pred eecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhcc----c--hh
Confidence 999999987655421 11223557999999999997643 4568899999999999999999984221 1 11
Q ss_pred HHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 863 VYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 863 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
..|..+.-++.+.+++.....-.+++.+|+..||++|+++.|++++
T Consensus 1449 --------aIMy~V~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1449 --------AIMYHVAAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred --------HHHhHHhccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 1234444555667777777777888899999999999999987764
No 268
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=5.5e-34 Score=309.06 Aligned_cols=265 Identities=23% Similarity=0.291 Sum_probs=198.4
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
+|+..+.||+|++|.||+|+.. +++.||||++.... ........+.+|++++++++||||++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~---------------~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 65 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT---------------ETEGVPSTAIREISLLKELNHPNIVKLL 65 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccc---------------cccccchHHHHHHHHHHhcCCCCCcchh
Confidence 3778889999999999999965 68999999884221 1112335688999999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRI 788 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 788 (947)
+++.+++..++||||++ ++|.+++.......+++..+..++.|++.|++||| +.+++||||+|+||+++.++.++|
T Consensus 66 ~~~~~~~~~~~v~e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh---~~~i~H~~l~p~nill~~~~~~~l 141 (284)
T cd07860 66 DVIHTENKLYLVFEFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKL 141 (284)
T ss_pred hhcccCCcEEEEeeccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEE
Confidence 99999999999999995 68999988766667899999999999999999999 889999999999999999999999
Q ss_pred eccccceecccCCCCcceecccccccccCccccccCC-CCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc
Q 002250 789 ADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCK-INEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKM 867 (947)
Q Consensus 789 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 867 (947)
+|||++........ ......++..|+|||+..+.. ++.++||||||+++|||+||+.||..... .....+......
T Consensus 142 ~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~-~~~~~~~~~~~~ 218 (284)
T cd07860 142 ADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLG 218 (284)
T ss_pred eeccchhhcccCcc--ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH-HHHHHHHHHHhC
Confidence 99999875543221 112234688999999887654 57889999999999999999999854321 111111111000
Q ss_pred cccc--------------cccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 868 DSRD--------------SMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 868 ~~~~--------------~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
.... ....................+.+++.+|++.||++|||+.+++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 219 TPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred CCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 0000 000000011111112233557789999999999999999999863
No 269
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=8.2e-34 Score=312.92 Aligned_cols=195 Identities=26% Similarity=0.391 Sum_probs=158.0
Q ss_pred cccccccCceeEEEEEeC---CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEEE
Q 002250 634 ENLIGKGGSGNVYKVVLN---SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYCS 710 (947)
Q Consensus 634 ~~~iG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 710 (947)
..+||+|+||+||+|+.+ ++..||+|.+... .....+.+|++++++++||||++++++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~-------------------~~~~~~~~E~~~l~~l~h~niv~~~~~ 66 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGT-------------------GISMSACREIALLRELKHPNVIALQKV 66 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCC-------------------CCcHHHHHHHHHHHhCCCCCeeeEEEE
Confidence 357999999999999965 3578999987311 123457789999999999999999999
Q ss_pred Eec--CCccEEEEeccCCCChHHHhhhc-------CCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEe-
Q 002250 711 ITS--EDSNLLVYEYLPNGSLWDRLHTC-------HKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILL- 780 (947)
Q Consensus 711 ~~~--~~~~~lv~e~~~~gsL~~~l~~~-------~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll- 780 (947)
+.. +...++||||++ ++|.+++... ....+++..+..++.|++.||+||| +.+|+||||||+||++
T Consensus 67 ~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivH~Dlkp~Nil~~ 142 (317)
T cd07867 67 FLSHSDRKVWLLFDYAE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVM 142 (317)
T ss_pred EeccCCCeEEEEEeeeC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEc
Confidence 854 456789999986 5788877532 2235788999999999999999999 8999999999999999
Q ss_pred ---cCCCCeEEeccccceecccCCCC-cceecccccccccCccccccC-CCCCccchHHHHHHHHHHHhCCCCCCC
Q 002250 781 ---DLEWKPRIADFGLAKIVQTGEAG-DLTHVIAGTHGYIAPEYAYTC-KINEKSDVYSFGVVLMELVTGKRPIVP 851 (947)
Q Consensus 781 ---~~~~~~kl~DfG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~ 851 (947)
+.++.+||+|||+++........ .......||+.|+|||++.+. .++.++|||||||++|||+||+.||..
T Consensus 143 ~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~ 218 (317)
T cd07867 143 GEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred cCCCCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence 46678999999999866443221 112234689999999998764 578999999999999999999999964
No 270
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=7.1e-34 Score=304.89 Aligned_cols=254 Identities=25% Similarity=0.391 Sum_probs=192.9
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
+|+..+.||+|+||.||+|... +++.||+|++...... .........+.+|+.++++++||||++++
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~------------~~~~~~~~~~~~e~~~l~~l~h~~i~~~~ 70 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPES------------PETSKEVSALECEIQLLKNLQHERIVQYY 70 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCC------------chhHHHHHHHHHHHHHHHHcCCCCeeeEE
Confidence 5788899999999999999965 6899999987422100 00112335688999999999999999999
Q ss_pred EEEecC--CccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCe
Q 002250 709 CSITSE--DSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKP 786 (947)
Q Consensus 709 ~~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 786 (947)
+++... ...+++|||+++++|.+++.... .+++.....++.|++.||+||| +.+|+||||+|+||+++.++.+
T Consensus 71 ~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~LH---~~~i~H~~l~p~nil~~~~~~~ 145 (266)
T cd06651 71 GCLRDRAEKTLTIFMEYMPGGSVKDQLKAYG--ALTESVTRKYTRQILEGMSYLH---SNMIVHRDIKGANILRDSAGNV 145 (266)
T ss_pred EEEEcCCCCEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCE
Confidence 998763 56689999999999999997643 4788888999999999999999 8999999999999999999999
Q ss_pred EEeccccceecccCCC-CcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHh
Q 002250 787 RIADFGLAKIVQTGEA-GDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYS 865 (947)
Q Consensus 787 kl~DfG~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~ 865 (947)
+|+|||+++....... ........++..|+|||++.+..++.++|||||||++|||++|+.||.... .......
T Consensus 146 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~-----~~~~~~~ 220 (266)
T cd06651 146 KLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYE-----AMAAIFK 220 (266)
T ss_pred EEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccc-----hHHHHHH
Confidence 9999999875533211 111123457899999999988889999999999999999999999985321 1111111
Q ss_pred hccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 866 KMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 866 ~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
.... ...+ ..+......+..++ +||..+|++||+|.|+++
T Consensus 221 ~~~~------~~~~---~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 221 IATQ------PTNP---QLPSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred HhcC------CCCC---CCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 1100 0111 12222334455555 788899999999999975
No 271
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1e-33 Score=307.28 Aligned_cols=254 Identities=26% Similarity=0.398 Sum_probs=199.9
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
++|++.+.||+|+||.||+|..+ +++.||+|.+... ........+.+|+.++++++||||+++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~----------------~~~~~~~~~~~e~~~l~~~~~~~i~~~ 64 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLE----------------LDESKFNQIIMELDILHKAVSPYIVDF 64 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecc----------------cCHHHHHHHHHHHHHHHhcCCCcHHhh
Confidence 36788899999999999999976 7899999987311 011224568899999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcC-CccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCe
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCH-KIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKP 786 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 786 (947)
++++..++..++||||+++++|.+++.... ...+++..+..++.|++.|++|||+ +.+|+||||||+||+++.++.+
T Consensus 65 ~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~ 142 (286)
T cd06622 65 YGAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKE--EHNIIHRDVKPTNVLVNGNGQV 142 (286)
T ss_pred hhheecCCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh--cCCEeeCCCCHHHEEECCCCCE
Confidence 999999999999999999999999887632 2368999999999999999999993 3589999999999999999999
Q ss_pred EEeccccceecccCCCCcceecccccccccCccccccCC------CCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHH
Q 002250 787 RIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCK------INEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIV 860 (947)
Q Consensus 787 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~ 860 (947)
+|+|||.+....... .....+++.|+|||++.+.. ++.++|+|||||++|||++|+.||.... .....
T Consensus 143 ~l~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~--~~~~~ 216 (286)
T cd06622 143 KLCDFGVSGNLVASL----AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPET--YANIF 216 (286)
T ss_pred EEeecCCcccccCCc----cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcc--hhhHH
Confidence 999999987553322 12345788999999985543 4789999999999999999999985321 11111
Q ss_pred HHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 861 NWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 861 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
..... +.+......+......+.+++.+|++.+|++||++.+++..
T Consensus 217 ~~~~~----------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 217 AQLSA----------IVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred HHHHH----------HhhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 11111 11111222333456678899999999999999999999874
No 272
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=4.3e-34 Score=305.02 Aligned_cols=240 Identities=21% Similarity=0.333 Sum_probs=185.2
Q ss_pred ccccccCceeEEEEEeCC--------CcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccce
Q 002250 635 NLIGKGGSGNVYKVVLNS--------GKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVK 706 (947)
Q Consensus 635 ~~iG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 706 (947)
+.||+|+||.||+|.... ..+||+|.+.. ......+.+.+|+.+++.++||||++
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~-----------------~~~~~~~~~~~e~~~l~~~~h~~iv~ 63 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDK-----------------SHRNYSESFFEAASMMSQLSHKHLVL 63 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcc-----------------hhHHHHHHHHHHHHHHHhCCCCChhh
Confidence 469999999999998642 23477776521 11123457888999999999999999
Q ss_pred EEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCC-
Q 002250 707 LYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWK- 785 (947)
Q Consensus 707 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~- 785 (947)
+++++..++..++||||+++|+|.++++..+ ..+++..+..++.|++.|++||| +.+|+||||||+||+++.++.
T Consensus 64 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~ 139 (258)
T cd05078 64 NYGVCVCGDESIMVQEYVKFGSLDTYLKKNK-NLINISWKLEVAKQLAWALHFLE---DKGLTHGNVCAKNVLLIREEDR 139 (258)
T ss_pred eeeEEEeCCCcEEEEecCCCCcHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEEeccccc
Confidence 9999999999999999999999999998643 36789999999999999999999 899999999999999987765
Q ss_pred -------eEEeccccceecccCCCCcceecccccccccCccccccC-CCCCccchHHHHHHHHHHHhCC-CCCCCCCCCc
Q 002250 786 -------PRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTC-KINEKSDVYSFGVVLMELVTGK-RPIVPEFGDS 856 (947)
Q Consensus 786 -------~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~-~p~~~~~~~~ 856 (947)
++++|||.+...... ....++..|+|||++.+. .++.++||||||+++|||++|. .||... .
T Consensus 140 ~~~~~~~~~l~d~g~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~-~-- 210 (258)
T cd05078 140 KTGNPPFIKLSDPGISITVLPK------EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSAL-D-- 210 (258)
T ss_pred ccCCCceEEecccccccccCCc------hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhc-c--
Confidence 599999988654322 234578899999999764 4789999999999999999985 444211 1
Q ss_pred ccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 002250 857 KDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLE 918 (947)
Q Consensus 857 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~ 918 (947)
...... ...... . .+......+.+++.+||+.+|++|||+.++++.|+
T Consensus 211 --~~~~~~-~~~~~~--------~---~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 211 --SQKKLQ-FYEDRH--------Q---LPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred --HHHHHH-HHHccc--------c---CCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 111100 000000 1 11112245789999999999999999999999874
No 273
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=8.6e-34 Score=304.67 Aligned_cols=253 Identities=25% Similarity=0.316 Sum_probs=194.9
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
+.+.....||+|+||.||+|... ++..||+|.+... .....+.+.+|+.++++++|+||+++
T Consensus 8 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~-----------------~~~~~~~~~~e~~~l~~l~h~~iv~~ 70 (268)
T cd06624 8 DENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPER-----------------DSRYVQPLHEEIALHSYLKHRNIVQY 70 (268)
T ss_pred ccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCC-----------------CHHHHHHHHHHHHHHHhcCCCCeeee
Confidence 44555678999999999999955 6788999987321 11234578899999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhc-CCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecC-CCC
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTC-HKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDL-EWK 785 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~-~~~ 785 (947)
++++..++..++|+||+++++|.+++... .....++..+..++.|++.|++||| +.+|+||||||+||+++. ++.
T Consensus 71 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~h~dl~p~nil~~~~~~~ 147 (268)
T cd06624 71 LGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLH---DNQIVHRDIKGDNVLVNTYSGV 147 (268)
T ss_pred eeeeccCCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCe
Confidence 99999999999999999999999999863 2222378888889999999999999 899999999999999986 679
Q ss_pred eEEeccccceecccCCCCcceecccccccccCccccccCC--CCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHH
Q 002250 786 PRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCK--INEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWV 863 (947)
Q Consensus 786 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~ 863 (947)
++|+|||.+........ ......|++.|+|||++.... ++.++||||||+++|||++|+.||....... ...+.
T Consensus 148 ~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~--~~~~~ 223 (268)
T cd06624 148 VKISDFGTSKRLAGINP--CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQ--AAMFK 223 (268)
T ss_pred EEEecchhheecccCCC--ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChh--hhHhh
Confidence 99999999876543221 122335789999999986543 7889999999999999999999984321111 11110
Q ss_pred HhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 864 YSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 864 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
.. .....+..+......+.+++.+||+.+|++|||+.|++++
T Consensus 224 ~~-----------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 224 VG-----------MFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred hh-----------hhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 00 0001112233344568889999999999999999999864
No 274
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=6.8e-34 Score=308.32 Aligned_cols=264 Identities=22% Similarity=0.315 Sum_probs=196.3
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
+|+..+.||+|+||.||+|+.. +|+.||+|++.... ........+.+|++++++++||||++++
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~---------------~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 65 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDD---------------DDEGVPSSALREICLLKELKHKNIVRLY 65 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeeccc---------------ccccCccchhHHHHHHHhcCCCCeeeHH
Confidence 4777889999999999999965 68999999884221 1112234577899999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRI 788 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 788 (947)
+++.+....++|+||++ ++|.+++... ...+++.....++.||++||+||| +.+|+||||||+||+++.++.++|
T Consensus 66 ~~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dl~~~nil~~~~~~~~l 140 (284)
T cd07839 66 DVLHSDKKLTLVFEYCD-QDLKKYFDSC-NGDIDPEIVKSFMFQLLKGLAFCH---SHNVLHRDLKPQNLLINKNGELKL 140 (284)
T ss_pred HHhccCCceEEEEecCC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEcCCCcEEE
Confidence 99999999999999996 5888887753 345899999999999999999999 899999999999999999999999
Q ss_pred eccccceecccCCCCcceecccccccccCccccccCC-CCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc
Q 002250 789 ADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCK-INEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKM 867 (947)
Q Consensus 789 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 867 (947)
+|||+++....... ......++..|+|||++.+.. ++.++|||||||++|||+||+.|+.........+ +......
T Consensus 141 ~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~-~~~~~~~ 217 (284)
T cd07839 141 ADFGLARAFGIPVR--CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQL-KRIFRLL 217 (284)
T ss_pred CccchhhccCCCCC--CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHH-HHHHHHh
Confidence 99999975543221 112335788999999987654 6889999999999999999999975432211111 1111100
Q ss_pred c-----------cccccc--ccccCCC--CccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 868 D-----------SRDSML--TVVDPNI--SEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 868 ~-----------~~~~~~--~~~d~~~--~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
. ...... ....... ..........+.+++.+|++.||.+|||+.|++++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h 281 (284)
T cd07839 218 GTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH 281 (284)
T ss_pred CCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence 0 000000 0000000 01112234567889999999999999999999863
No 275
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.1e-33 Score=307.15 Aligned_cols=265 Identities=22% Similarity=0.235 Sum_probs=198.6
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
++|+..+.||+|+||.||+|+.+ +++.||+|++.... ......+.+.+|+.++++++|||++++
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~---------------~~~~~~~~~~~e~~~l~~~~h~~i~~~ 65 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESE---------------DDPVIKKIALREIRMLKQLKHPNLVNL 65 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecc---------------cCccccHHHHHHHHHHHhCCCCCEeee
Confidence 36888899999999999999976 68999999883211 111223457899999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
++++..+...++||||++++.+..+.... ..+++..+..++.|++.||+||| +.+++||||||+||+++.++.++
T Consensus 66 ~~~~~~~~~~~~v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~ql~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~~ 140 (286)
T cd07847 66 IEVFRRKRKLHLVFEYCDHTVLNELEKNP--RGVPEHLIKKIIWQTLQAVNFCH---KHNCIHRDVKPENILITKQGQIK 140 (286)
T ss_pred eeEEeeCCEEEEEEeccCccHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCChhhEEEcCCCcEE
Confidence 99999999999999999998888777642 35899999999999999999999 89999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYT-CKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSK 866 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 866 (947)
|+|||++........ ......++..|+|||++.+ ..++.++||||||+++|||++|+.||...... +.........
T Consensus 141 l~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~-~~~~~~~~~~ 217 (286)
T cd07847 141 LCDFGFARILTGPGD--DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDV-DQLYLIRKTL 217 (286)
T ss_pred ECccccceecCCCcc--cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHh
Confidence 999999987644321 1123357889999999876 45788999999999999999999998543211 1111111000
Q ss_pred ccc----------cccccccccCCC------CccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 867 MDS----------RDSMLTVVDPNI------SEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 867 ~~~----------~~~~~~~~d~~~------~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
... .........+.. ..........+.+++.+|++.+|++||++.|++++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 218 GDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred CCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 000 000000000000 01112234678899999999999999999998763
No 276
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=1.6e-33 Score=303.29 Aligned_cols=265 Identities=26% Similarity=0.383 Sum_probs=199.6
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
+|...+.||+|+||.||+|... +++.||||.+......... .........+.+.+|+.++++++|||+++++
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~-------~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~ 74 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGR-------HDSRQKDMVKALRSEIETLKDLDHLNIVQYL 74 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcc-------cchHHHHHHHHHHHHHHHHHhcCCCCcceEE
Confidence 4677889999999999999854 6899999987422110000 0000111235688899999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRI 788 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 788 (947)
+++..++..++||||+++++|.+++... ..+++..+..++.|++.|+.||| +.+++||||+|+||+++.++.+++
T Consensus 75 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~~~nil~~~~~~~~l 149 (272)
T cd06629 75 GFETTEEYLSIFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLH---SKGILHRDLKADNLLVDADGICKI 149 (272)
T ss_pred EEeccCCceEEEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHh---hCCeeecCCChhhEEEcCCCeEEE
Confidence 9999999999999999999999999875 45788889999999999999999 889999999999999999999999
Q ss_pred eccccceecccCCCCcceecccccccccCccccccCC--CCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 002250 789 ADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCK--INEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSK 866 (947)
Q Consensus 789 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 866 (947)
+|||.++...............|+..|+|||...... ++.++|+||||+++||+++|..||... ... ......
T Consensus 150 ~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~----~~~-~~~~~~ 224 (272)
T cd06629 150 SDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDE----EAI-AAMFKL 224 (272)
T ss_pred eeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCc----chH-HHHHHh
Confidence 9999997654322222222345789999999987654 788999999999999999999998421 111 111111
Q ss_pred ccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 867 MDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 867 ~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
..... ...+. .......+..+.+++.+|++.+|++|||+.+++++
T Consensus 225 ~~~~~--~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 225 GNKRS--APPIP---PDVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred hcccc--CCcCC---ccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 11100 00011 11222345678889999999999999999999874
No 277
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=2.3e-33 Score=299.69 Aligned_cols=238 Identities=25% Similarity=0.376 Sum_probs=186.4
Q ss_pred ccccccCceeEEEEEeCCCc-----------EEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccc
Q 002250 635 NLIGKGGSGNVYKVVLNSGK-----------ELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVN 703 (947)
Q Consensus 635 ~~iG~G~~g~Vy~~~~~~~~-----------~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n 703 (947)
+.||+|+||.||+|...+.. .|++|.+... ......+.+|+.++++++|||
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~------------------~~~~~~~~~e~~~l~~l~h~~ 62 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSD------------------HRDSLAFFETASLMSQLSHKH 62 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccc------------------hhhHHHHHHHHHHHHcCCCcc
Confidence 46899999999999976432 4677765211 111578889999999999999
Q ss_pred cceEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCC
Q 002250 704 VVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLE 783 (947)
Q Consensus 704 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~ 783 (947)
|+++++++.. ...++||||+++|+|.+++..... .+++..+..++.|++.||+||| +.+|+||||||+||+++.+
T Consensus 63 i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dlkp~Nill~~~ 137 (259)
T cd05037 63 LVKLYGVCVR-DENIMVEEYVKFGPLDVFLHREKN-NVSLHWKLDVAKQLASALHYLE---DKKLVHGNVCGKNILVARY 137 (259)
T ss_pred hhheeeEEec-CCcEEEEEcCCCCcHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHh---hCCeecccCccceEEEecC
Confidence 9999999988 778999999999999999987432 6889999999999999999999 8999999999999999988
Q ss_pred C-------CeEEeccccceecccCCCCcceecccccccccCccccccC--CCCCccchHHHHHHHHHHHh-CCCCCCCCC
Q 002250 784 W-------KPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTC--KINEKSDVYSFGVVLMELVT-GKRPIVPEF 853 (947)
Q Consensus 784 ~-------~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~slGv~l~ellt-g~~p~~~~~ 853 (947)
+ .+|++|||++...... ....++..|+|||++... .++.++||||||+++|||++ |..||....
T Consensus 138 ~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~ 211 (259)
T cd05037 138 GLNEGYVPFIKLSDPGIPITVLSR------EERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLS 211 (259)
T ss_pred ccccCCceeEEeCCCCcccccccc------cccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCC
Confidence 7 7999999999765431 123567789999998876 78899999999999999999 466663321
Q ss_pred CCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 002250 854 GDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLE 918 (947)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~ 918 (947)
......+.. . ... .+ .+ ....+.+++.+||..+|++|||+.++++.|+
T Consensus 212 --~~~~~~~~~---~-~~~--------~~-~~--~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 212 --SSEKERFYQ---D-QHR--------LP-MP--DCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred --chhHHHHHh---c-CCC--------CC-CC--CchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 111111110 0 000 00 00 1157889999999999999999999999874
No 278
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1.9e-33 Score=300.22 Aligned_cols=252 Identities=28% Similarity=0.398 Sum_probs=200.2
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
+|+..+.||+|+||.||+|... +++.||+|.+....... ......+.+.+|++++++++|+||++++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~------------~~~~~~~~~~~e~~~l~~~~h~~i~~~~ 68 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQ------------TGQEAVKQLEQEIALLSKLQHPNIVQYL 68 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccc------------cchHHHHHHHHHHHHHHhcCCCCchhee
Confidence 3677789999999999999976 78999999884221100 0112346788999999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRI 788 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 788 (947)
+++..+...++||||+++++|.+++... ..+++..+..++.|++.|++||| +.+++|+||+|+||+++.++.+||
T Consensus 69 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~~~ni~~~~~~~~kl 143 (258)
T cd06632 69 GTEREEDNLYIFLELVPGGSLAKLLKKY--GSFPEPVIRLYTRQILLGLEYLH---DRNTVHRDIKGANILVDTNGVVKL 143 (258)
T ss_pred eeEecCCeEEEEEEecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEE
Confidence 9999999999999999999999999864 34789999999999999999999 899999999999999999999999
Q ss_pred eccccceecccCCCCcceecccccccccCccccccCC-CCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc
Q 002250 789 ADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCK-INEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKM 867 (947)
Q Consensus 789 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 867 (947)
+|||.+....... ......|+..|+|||.+.... ++.++|+||||+++|||++|+.||.... .........
T Consensus 144 ~d~~~~~~~~~~~---~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~-----~~~~~~~~~ 215 (258)
T cd06632 144 ADFGMAKQVVEFS---FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLE-----GVAAVFKIG 215 (258)
T ss_pred ccCccceeccccc---cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCc-----HHHHHHHHH
Confidence 9999987654332 122346889999999987766 8899999999999999999999985321 111111111
Q ss_pred cccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 868 DSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 868 ~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
.. ...+..+......+.+++.+|++.+|++||++.++++
T Consensus 216 ~~---------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 216 RS---------KELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred hc---------ccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 10 0111222234466788999999999999999999986
No 279
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.2e-33 Score=305.77 Aligned_cols=252 Identities=24% Similarity=0.322 Sum_probs=198.8
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
++|++.+.||+|+||.||+|... +++.||+|++... .....+.+.+|++++++++||||+++
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~-----------------~~~~~~~~~~e~~~l~~l~h~~i~~~ 67 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE-----------------SEEELEDFMVEIDILSECKHPNIVGL 67 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC-----------------CHHHHHHHHHHHHHHHhCCCCceeEE
Confidence 57888999999999999999965 6899999988311 11234568899999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
++++..+...++||||+++++|.+++... ...+++.....++.|++.|+.||| +.+|+||||+|+||+++.++.++
T Consensus 68 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~nili~~~~~~~ 143 (280)
T cd06611 68 YEAYFYENKLWILIEFCDGGALDSIMLEL-ERGLTEPQIRYVCRQMLEALNFLH---SHKVIHRDLKAGNILLTLDGDVK 143 (280)
T ss_pred EEEEecCCeEEEEeeccCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEECCCCCEE
Confidence 99999999999999999999999998763 245889999999999999999999 89999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccc-----cCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHH
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAY-----TCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNW 862 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~ 862 (947)
|+|||.+........ ......+++.|+|||++. ...++.++||||||+++|||++|+.||... +..+.
T Consensus 144 l~d~g~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~-----~~~~~ 216 (280)
T cd06611 144 LADFGVSAKNKSTLQ--KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHEL-----NPMRV 216 (280)
T ss_pred EccCccchhhccccc--ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccC-----CHHHH
Confidence 999998865433221 122346899999999875 334677999999999999999999998532 11111
Q ss_pred HHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 863 VYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 863 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
......... +. ...+......+.+++.+||+.+|++||++.++++.
T Consensus 217 ~~~~~~~~~-------~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 217 LLKILKSEP-------PT-LDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred HHHHhcCCC-------CC-cCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 111111110 00 01122234567889999999999999999999875
No 280
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.9e-33 Score=305.22 Aligned_cols=257 Identities=28% Similarity=0.335 Sum_probs=197.2
Q ss_pred HHHhhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-ccc
Q 002250 625 KEIIDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-RHV 702 (947)
Q Consensus 625 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~ 702 (947)
.+..++|++.+.||+|+||.||+|... +++.+|+|++.. .......+.+|+.+++++ +||
T Consensus 14 ~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~------------------~~~~~~~~~~e~~~l~~l~~h~ 75 (286)
T cd06638 14 PDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDP------------------IHDIDEEIEAEYNILKALSDHP 75 (286)
T ss_pred CCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecc------------------ccchHHHHHHHHHHHHHHhcCC
Confidence 345688999999999999999999965 688999998721 112235678899999999 699
Q ss_pred ccceEEEEEe-----cCCccEEEEeccCCCChHHHhhhc--CCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCC
Q 002250 703 NVVKLYCSIT-----SEDSNLLVYEYLPNGSLWDRLHTC--HKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKS 775 (947)
Q Consensus 703 niv~l~~~~~-----~~~~~~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp 775 (947)
||+++++++. .++..++||||+++++|.+++... ....+++..+..++.|++.|+.||| +.+++||||||
T Consensus 76 ~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp 152 (286)
T cd06638 76 NVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLH---VNKTIHRDVKG 152 (286)
T ss_pred CeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHH---hCCccccCCCH
Confidence 9999999874 345679999999999999988642 2346788999999999999999999 89999999999
Q ss_pred CCeEecCCCCeEEeccccceecccCCCCcceecccccccccCcccccc-----CCCCCccchHHHHHHHHHHHhCCCCCC
Q 002250 776 SNILLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYT-----CKINEKSDVYSFGVVLMELVTGKRPIV 850 (947)
Q Consensus 776 ~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slGv~l~elltg~~p~~ 850 (947)
+||++++++.++|+|||+++....... ......|++.|+|||++.. ..++.++||||+||++|||++|+.||.
T Consensus 153 ~nili~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~ 230 (286)
T cd06638 153 NNILLTTEGGVKLVDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLA 230 (286)
T ss_pred HhEEECCCCCEEEccCCceeecccCCC--ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCC
Confidence 999999999999999999976543221 1223468999999998753 447889999999999999999999985
Q ss_pred CCCCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 002250 851 PEFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQML 917 (947)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L 917 (947)
... ..+.......... ....+ +......+.+++.+|++.||++|||+.|++++.
T Consensus 231 ~~~-----~~~~~~~~~~~~~--~~~~~------~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 231 DLH-----PMRALFKIPRNPP--PTLHQ------PELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred CCc-----hhHHHhhccccCC--CcccC------CCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 321 1111111100000 00001 111234688899999999999999999998753
No 281
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=3e-33 Score=306.64 Aligned_cols=252 Identities=29% Similarity=0.375 Sum_probs=197.5
Q ss_pred HhhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccc
Q 002250 627 IIDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVV 705 (947)
Q Consensus 627 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 705 (947)
..+.|+..+.||+|+||+||+|... +++.||+|++..... ........+.+|+++++.++||||+
T Consensus 13 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~--------------~~~~~~~~~~~Ei~~l~~l~h~niv 78 (307)
T cd06607 13 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGK--------------QSNEKWQDIIKEVRFLQQLRHPNTI 78 (307)
T ss_pred cchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEecccc--------------CcHHHHHHHHHHHHHHHhCCCCCEE
Confidence 3466888999999999999999965 689999998832110 0112235688999999999999999
Q ss_pred eEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCC
Q 002250 706 KLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWK 785 (947)
Q Consensus 706 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~ 785 (947)
++++++..++..++||||++ |++.+++... ...+++..+..++.|++.||.||| +.+|+||||+|+||++++++.
T Consensus 79 ~~~~~~~~~~~~~lv~e~~~-g~l~~~~~~~-~~~l~~~~~~~~~~ql~~~L~~LH---~~~i~H~dl~p~nIl~~~~~~ 153 (307)
T cd06607 79 EYKGCYLREHTAWLVMEYCL-GSASDILEVH-KKPLQEVEIAAICHGALQGLAYLH---SHERIHRDIKAGNILLTEPGT 153 (307)
T ss_pred EEEEEEEeCCeEEEEHHhhC-CCHHHHHHHc-ccCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEECCCCC
Confidence 99999999999999999996 6777777643 245899999999999999999999 899999999999999999999
Q ss_pred eEEeccccceecccCCCCcceecccccccccCccccc---cCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHH
Q 002250 786 PRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAY---TCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNW 862 (947)
Q Consensus 786 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~ 862 (947)
++|+|||++....... ...+++.|+|||++. .+.++.++||||||+++|||++|+.||... +....
T Consensus 154 ~kL~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~-----~~~~~ 222 (307)
T cd06607 154 VKLADFGSASLVSPAN------SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM-----NAMSA 222 (307)
T ss_pred EEEeecCcceecCCCC------CccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCc-----cHHHH
Confidence 9999999987654321 345788999999874 456888999999999999999999998432 11111
Q ss_pred HHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 002250 863 VYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQML 917 (947)
Q Consensus 863 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L 917 (947)
......... +.. ........+.+++.+||+.+|++||++.+++++-
T Consensus 223 ~~~~~~~~~-------~~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 268 (307)
T cd06607 223 LYHIAQNDS-------PTL--SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHR 268 (307)
T ss_pred HHHHhcCCC-------CCC--CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcCh
Confidence 111111100 001 1223456789999999999999999999998753
No 282
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=8e-34 Score=307.37 Aligned_cols=252 Identities=23% Similarity=0.309 Sum_probs=196.2
Q ss_pred HhhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-ccccc
Q 002250 627 IIDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-RHVNV 704 (947)
Q Consensus 627 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~ni 704 (947)
..+.|++.+.||+|+||.||+|... +++.+|+|++.. .......+..|+.+++++ +||||
T Consensus 14 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~------------------~~~~~~~~~~e~~~l~~~~~h~~i 75 (282)
T cd06636 14 PAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDV------------------TEDEEEEIKLEINMLKKYSHHRNI 75 (282)
T ss_pred hhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEec------------------ChHHHHHHHHHHHHHHHhcCCCcE
Confidence 3478889999999999999999964 688999998721 112335678899999998 69999
Q ss_pred ceEEEEEec------CCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCe
Q 002250 705 VKLYCSITS------EDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNI 778 (947)
Q Consensus 705 v~l~~~~~~------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NI 778 (947)
+++++++.. ....++||||+++|+|.+++.......+++..+..++.|++.|++||| +.+|+||||+|+||
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dl~~~ni 152 (282)
T cd06636 76 ATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLH---AHKVIHRDIKGQNV 152 (282)
T ss_pred EEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHE
Confidence 999999853 456789999999999999998755566888889999999999999999 89999999999999
Q ss_pred EecCCCCeEEeccccceecccCCCCcceecccccccccCccccc-----cCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 002250 779 LLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAY-----TCKINEKSDVYSFGVVLMELVTGKRPIVPEF 853 (947)
Q Consensus 779 ll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slGv~l~elltg~~p~~~~~ 853 (947)
++++++.++|+|||++........ ......|+..|+|||.+. ...++.++|||||||++|||++|+.||....
T Consensus 153 li~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~ 230 (282)
T cd06636 153 LLTENAEVKLVDFGVSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMH 230 (282)
T ss_pred EECCCCCEEEeeCcchhhhhcccc--CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccC
Confidence 999999999999999875432211 122346889999999875 3457889999999999999999999985321
Q ss_pred CCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 854 GDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
. ... ....... . .........+..+.+++.+||+.||.+|||+.|+++
T Consensus 231 ~----~~~-~~~~~~~-------~--~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 231 P----MRA-LFLIPRN-------P--PPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred H----Hhh-hhhHhhC-------C--CCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 1 000 0000000 0 001111234557899999999999999999999975
No 283
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-34 Score=282.02 Aligned_cols=253 Identities=23% Similarity=0.321 Sum_probs=193.3
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-cccccce
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-RHVNVVK 706 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~ 706 (947)
+..+....||.|+.|.||+++.+ +|...|||.+.... ...+.+++...+.++.+- ..|.||+
T Consensus 92 ndl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~----------------Nkee~kRILmDldvv~~s~dcpyIV~ 155 (391)
T KOG0983|consen 92 NDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTG----------------NKEENKRILMDLDVVLKSHDCPYIVQ 155 (391)
T ss_pred HHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccC----------------CHHHHHHHHHhhhHHhhccCCCeeee
Confidence 45566778999999999999966 68999999984221 123345566667766555 4899999
Q ss_pred EEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCe
Q 002250 707 LYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKP 786 (947)
Q Consensus 707 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 786 (947)
.+|||..+..+++.||.|. ......++. -..++++...-++...+++||.||.+ .++|+|||+||+|||+|+.|.+
T Consensus 156 c~GyFi~n~dV~IcMelMs-~C~ekLlkr-ik~piPE~ilGk~tva~v~AL~YLKe--KH~viHRDvKPSNILlDe~Gni 231 (391)
T KOG0983|consen 156 CFGYFITNTDVFICMELMS-TCAEKLLKR-IKGPIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGNI 231 (391)
T ss_pred eeeEEeeCchHHHHHHHHH-HHHHHHHHH-hcCCchHHhhhhhHHHHHHHHHHHHH--hcceeecccCccceEEccCCCE
Confidence 9999999999999999993 344444444 44568888888899999999999996 7899999999999999999999
Q ss_pred EEeccccceecccCCCCcceecccccccccCcccccc---CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHH
Q 002250 787 RIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYT---CKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWV 863 (947)
Q Consensus 787 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~ 863 (947)
|+||||++..+-+...+. ...|-+.|||||.+.- ..|+-++||||||+.++|+.||+.||..- ....+.+
T Consensus 232 KlCDFGIsGrlvdSkAht---rsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c----~tdFe~l 304 (391)
T KOG0983|consen 232 KLCDFGISGRLVDSKAHT---RSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGC----KTDFEVL 304 (391)
T ss_pred Eeecccccceeecccccc---cccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCC----CccHHHH
Confidence 999999998776655443 4478999999999853 46899999999999999999999998532 1122222
Q ss_pred HhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 864 YSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 864 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
....+... |.++... .-...+.+++..|+.+|+.+||...+++++
T Consensus 305 tkvln~eP-------P~L~~~~-gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 305 TKVLNEEP-------PLLPGHM-GFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred HHHHhcCC-------CCCCccc-CcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 22222111 1111111 134568899999999999999999998864
No 284
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=1.5e-33 Score=326.34 Aligned_cols=257 Identities=19% Similarity=0.207 Sum_probs=187.6
Q ss_pred hhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccc-----
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRH----- 701 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h----- 701 (947)
.++|++.+.||+|+||+||+|... .++.||||++... ......+..|+++++.++|
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~------------------~~~~~~~~~e~~~l~~l~~~~~~~ 189 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNV------------------PKYTRDAKIEIQFMEKVRQADPAD 189 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecc------------------hhhHHHHHHHHHHHHHHhhcCccc
Confidence 467999999999999999999965 6889999998310 0122345667777777755
Q ss_pred -cccceEEEEEecC-CccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCC-CCeEeccCCCCCe
Q 002250 702 -VNVVKLYCSITSE-DSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFD-RPVIHRDVKSSNI 778 (947)
Q Consensus 702 -~niv~l~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~-~~ivH~Dlkp~NI 778 (947)
.+++++++++..+ ...++|||++ +++|.+++.+. ..+++..+..++.||+.||+||| + .+||||||||+||
T Consensus 190 ~~~i~~i~~~~~~~~~~~~iv~~~~-g~~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~yLH---~~~gIiHrDlKP~NI 263 (467)
T PTZ00284 190 RFPLMKIQRYFQNETGHMCIVMPKY-GPCLLDWIMKH--GPFSHRHLAQIIFQTGVALDYFH---TELHLMHTDLKPENI 263 (467)
T ss_pred CcceeeeEEEEEcCCceEEEEEecc-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---hcCCeecCCCCHHHE
Confidence 4588999998765 4678999988 78899998764 45889999999999999999999 6 5999999999999
Q ss_pred EecCCC----------------CeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHH
Q 002250 779 LLDLEW----------------KPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMEL 842 (947)
Q Consensus 779 ll~~~~----------------~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~el 842 (947)
|++.++ .+||+|||.+...... ....+||+.|+|||++.+..++.++|||||||++|||
T Consensus 264 Ll~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~~-----~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~el 338 (467)
T PTZ00284 264 LMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERHS-----RTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYEL 338 (467)
T ss_pred EEecCCcccccccccccCCCCceEEECCCCccccCccc-----cccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHH
Confidence 998765 4999999987543221 2245799999999999999999999999999999999
Q ss_pred HhCCCCCCCCCCCcccHHHHHHhhcc--------------------ccccccccccCC-C------Ccc-CHHHHHHHHH
Q 002250 843 VTGKRPIVPEFGDSKDIVNWVYSKMD--------------------SRDSMLTVVDPN-I------SEI-LKEDALKVLR 894 (947)
Q Consensus 843 ltg~~p~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~d~~-~------~~~-~~~~~~~l~~ 894 (947)
++|+.||..... .+....+..... .........++. + ... .......+.+
T Consensus 339 ltG~~pf~~~~~--~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 416 (467)
T PTZ00284 339 YTGKLLYDTHDN--LEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCD 416 (467)
T ss_pred HhCCCCCCCCCh--HHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHH
Confidence 999999954321 111111100000 000000000000 0 000 0011245779
Q ss_pred HHHhccCCCCCCCCCHHHHHH
Q 002250 895 IAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 895 l~~~cl~~dP~~RPt~~ev~~ 915 (947)
++.+|++.||++|||+.|+++
T Consensus 417 li~~mL~~dP~~R~ta~e~L~ 437 (467)
T PTZ00284 417 LIYGLLHYDRQKRLNARQMTT 437 (467)
T ss_pred HHHHhCCcChhhCCCHHHHhc
Confidence 999999999999999999997
No 285
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=1.8e-33 Score=306.18 Aligned_cols=263 Identities=21% Similarity=0.285 Sum_probs=194.8
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
+.|+..+.||+|++|+||+|..+ +++.||||.+.... .......+.+|++++++++||||+++
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~----------------~~~~~~~~~~E~~~l~~l~h~~i~~~ 68 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEH----------------EEGAPFTAIREASLLKDLKHANIVTL 68 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccc----------------ccCCchhHHHHHHHHhhCCCcceeeE
Confidence 67888999999999999999965 68999999984221 11222346689999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
++++..++..++||||++ ++|.+++.... ..+++.....++.|++.||+||| +.+|+||||||+||+++.++.++
T Consensus 69 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~-~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~dl~p~nil~~~~~~~k 143 (291)
T cd07844 69 HDIIHTKKTLTLVFEYLD-TDLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCH---QRRVLHRDLKPQNLLISERGELK 143 (291)
T ss_pred EEEEecCCeEEEEEecCC-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCHHHEEEcCCCCEE
Confidence 999999999999999997 49999987643 36788999999999999999999 89999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYT-CKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSK 866 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 866 (947)
|+|||+++....... ......++..|+|||+..+ ..++.++||||+|+++|||++|+.||....... +........
T Consensus 144 l~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~-~~~~~~~~~ 220 (291)
T cd07844 144 LADFGLARAKSVPSK--TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVE-DQLHKIFRV 220 (291)
T ss_pred ECccccccccCCCCc--cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHH-HHHHHHHHh
Confidence 999999875432211 1112346889999998875 457889999999999999999999985332111 111111111
Q ss_pred ccc--ccccccc------c--------cCCCCccCHH--HHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 867 MDS--RDSMLTV------V--------DPNISEILKE--DALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 867 ~~~--~~~~~~~------~--------d~~~~~~~~~--~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
... ...+... . ...+...... ....+.+++.+|++.+|++|||+.|+++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 221 LGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred cCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 000 0000000 0 0000000001 1256789999999999999999999875
No 286
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=1.4e-33 Score=301.07 Aligned_cols=252 Identities=25% Similarity=0.370 Sum_probs=201.6
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
+|++.+.||+|+||.||+|..+ +|..||+|.+.... ........+.+|+.++++++|+||++++
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~---------------~~~~~~~~~~~E~~~l~~~~h~~i~~~~ 65 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTK---------------MPVKEKEASKKEVILLAKMKHPNIVTFF 65 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhh---------------ccchhhHHHHHHHHHHHhCCCCChhhhh
Confidence 4677889999999999999965 68899999883211 1112345678999999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCC-CeE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEW-KPR 787 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~-~~k 787 (947)
+.+..++..++|+||+++++|.+++.......+++..+..++.|++.|++||| +.+++|+||||+||++++++ .++
T Consensus 66 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~~~ 142 (257)
T cd08225 66 ASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIH---DRKILHRDIKSQNIFLSKNGMVAK 142 (257)
T ss_pred heeccCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEcCCCCeEE
Confidence 99999999999999999999999998755556899999999999999999999 89999999999999999885 469
Q ss_pred EeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKM 867 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 867 (947)
++|||.+........ ......|++.|+|||+.....++.++|+||||+++|||++|+.||... ...++.....
T Consensus 143 l~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~-----~~~~~~~~~~ 215 (257)
T cd08225 143 LGDFGIARQLNDSME--LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGN-----NLHQLVLKIC 215 (257)
T ss_pred ecccccchhccCCcc--cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCc-----cHHHHHHHHh
Confidence 999999976543321 122345889999999998888999999999999999999999998432 2222222222
Q ss_pred cccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 868 DSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 868 ~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
... ..+........+.+++.+|+..+|++|||+.|++++
T Consensus 216 ~~~----------~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 216 QGY----------FAPISPNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred ccc----------CCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 111 111122233568889999999999999999999864
No 287
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=2.1e-33 Score=303.22 Aligned_cols=247 Identities=25% Similarity=0.346 Sum_probs=197.1
Q ss_pred ccCCcccccccCceeEEEEEe-CCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcc---ccccc
Q 002250 630 AVKPENLIGKGGSGNVYKVVL-NSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVR---HVNVV 705 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv 705 (947)
.|+..+.||+|+||.||+|.. .+++.||+|.+.... .......+.+|+.++++++ |||++
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~----------------~~~~~~~~~~e~~~l~~l~~~~~~~vi 65 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT----------------PDDDVSDIQREVALLSQLRQSQPPNIT 65 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC----------------CchhHHHHHHHHHHHHHhccCCCCCee
Confidence 467788999999999999996 478999999873211 1133456889999999996 99999
Q ss_pred eEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCC
Q 002250 706 KLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWK 785 (947)
Q Consensus 706 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~ 785 (947)
++++++..+...++||||+++++|.+++.. ..+++.....++.|++.|++||| +.+++||||+|+||++++++.
T Consensus 66 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~p~ni~i~~~~~ 139 (277)
T cd06917 66 KYYGSYLKGPRLWIIMEYAEGGSVRTLMKA---GPIAEKYISVIIREVLVALKYIH---KVGVIHRDIKAANILVTNTGN 139 (277)
T ss_pred eEeeeeeeCCEEEEEEecCCCCcHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHHEEEcCCCC
Confidence 999999999999999999999999999865 26889999999999999999999 899999999999999999999
Q ss_pred eEEeccccceecccCCCCcceecccccccccCccccccCC-CCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 002250 786 PRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCK-INEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVY 864 (947)
Q Consensus 786 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~ 864 (947)
++++|||.+......... .....|+..|+|||++.++. ++.++|||||||++|||++|+.||.... ......
T Consensus 140 ~~l~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~-----~~~~~~ 212 (277)
T cd06917 140 VKLCDFGVAALLNQNSSK--RSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVD-----AFRAMM 212 (277)
T ss_pred EEEccCCceeecCCCccc--cccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCC-----hhhhhh
Confidence 999999999876544321 22346889999999987644 6889999999999999999999985321 111111
Q ss_pred hhccccccccccccCCCCccCH-HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 865 SKMDSRDSMLTVVDPNISEILK-EDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 865 ~~~~~~~~~~~~~d~~~~~~~~-~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
.. ... ..+.... ..+..+.+++.+|++.||++||++.|+++
T Consensus 213 ~~-~~~---------~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 213 LI-PKS---------KPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred cc-ccC---------CCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 00 000 0111111 13456889999999999999999999986
No 288
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.7e-34 Score=313.20 Aligned_cols=248 Identities=26% Similarity=0.418 Sum_probs=194.2
Q ss_pred CCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEEE
Q 002250 632 KPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYCS 710 (947)
Q Consensus 632 ~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 710 (947)
+..+.||+|+|-+||||... +|.+||--.+. .....+.....++|..|+.+|+.|+|||||++|.+
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk-------------~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~S 109 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVK-------------IRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDS 109 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHh-------------HHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeh
Confidence 44678999999999999965 67788754331 11223334455889999999999999999999999
Q ss_pred EecCCc--cEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecC-CCCeE
Q 002250 711 ITSEDS--NLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDL-EWKPR 787 (947)
Q Consensus 711 ~~~~~~--~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~-~~~~k 787 (947)
|.+... ..+|+|.+..|+|..|.++.++ .+......++.||++||.|||.. .++|+|||||-.||+++. .|.||
T Consensus 110 W~d~~n~~in~iTEL~TSGtLr~Y~kk~~~--vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VK 186 (632)
T KOG0584|consen 110 WVDTDNKTINFITELFTSGTLREYRKKHRR--VNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVK 186 (632)
T ss_pred eecCCCceeeeeeecccCCcHHHHHHHhcc--CCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCcee
Confidence 988665 5689999999999999998654 67778999999999999999964 689999999999999985 49999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKM 867 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 867 (947)
|+|+|+|........ ..++|||.|||||+.. ..|++.+||||||+.++||+|+.+||- ...+-.+. |+++
T Consensus 187 IGDLGLAtl~r~s~a----ksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYs----EC~n~AQI-YKKV 256 (632)
T KOG0584|consen 187 IGDLGLATLLRKSHA----KSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYS----ECTNPAQI-YKKV 256 (632)
T ss_pred ecchhHHHHhhcccc----ceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChh----hhCCHHHH-HHHH
Confidence 999999998765543 2478999999999876 679999999999999999999999982 22222222 2222
Q ss_pred cccccccccccCCCCccCHH-HHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 868 DSRDSMLTVVDPNISEILKE-DALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 868 ~~~~~~~~~~d~~~~~~~~~-~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
..+. .+..... .-+++.++|.+|+.. .++|||+.|+++
T Consensus 257 ~SGi---------KP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 257 TSGI---------KPAALSKVKDPEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred HcCC---------CHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHhh
Confidence 1111 1111111 124577888899999 899999999985
No 289
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=2.1e-33 Score=303.12 Aligned_cols=249 Identities=27% Similarity=0.403 Sum_probs=200.0
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
+-|+..+.||+|+||.||+|... +++.||||.+... ........+.+|+.++++++||||+++
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~----------------~~~~~~~~~~~e~~~l~~l~h~~iv~~ 67 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLE----------------EAEDEIEDIQQEITVLSQCDSPYVTKY 67 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccc----------------cchHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 35677889999999999999864 6889999987211 111234578899999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
++++..+...++||||+++++|.+++.. ..+++.....++.|++.|++||| +.+++|+||+|+||+++.++.++
T Consensus 68 ~~~~~~~~~~~lv~e~~~~~~l~~~i~~---~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~Ni~i~~~~~~~ 141 (277)
T cd06641 68 YGSYLKDTKLWIIMEYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVK 141 (277)
T ss_pred EEEEEeCCeEEEEEEeCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHc---cCCeecCCCCHHhEEECCCCCEE
Confidence 9999999999999999999999999875 35789999999999999999999 89999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKM 867 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 867 (947)
++|||++........ ......++..|+|||++.+..++.++|+|||||++|||++|..||.... ....... .
T Consensus 142 l~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~-----~~~~~~~-~ 213 (277)
T cd06641 142 LADFGVAGQLTDTQI--KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELH-----PMKVLFL-I 213 (277)
T ss_pred Eeecccceecccchh--hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccc-----hHHHHHH-H
Confidence 999999876543221 1123457889999999988888999999999999999999999984321 1111111 1
Q ss_pred cccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 868 DSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 868 ~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
.. ...+......+..+.+++.+|++.+|++||++.+++++
T Consensus 214 ~~---------~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 214 PK---------NNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred hc---------CCCCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 10 11112223345668889999999999999999999985
No 290
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=3.1e-33 Score=308.00 Aligned_cols=255 Identities=24% Similarity=0.275 Sum_probs=200.2
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
+|+..+.||+|+||+||+|... +++.||+|.+...... .......+.+|+++++.++||||++++
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~--------------~~~~~~~~~~e~~~l~~l~~~~i~~~~ 67 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMI--------------KRNKVKRVLTEQEILATLDHPFLPTLY 67 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccc--------------hHHHHHHHHHHHHHHHhCCCCCchhhe
Confidence 5788899999999999999966 5899999998432110 012345688999999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRI 788 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 788 (947)
+.+..+...++||||+++++|.+++.......+++.....++.|++.||+||| +.+++||||||+||+++.++.++|
T Consensus 68 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l 144 (316)
T cd05574 68 ASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLH---LLGIVYRDLKPENILLHESGHIML 144 (316)
T ss_pred eeeecCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChHHeEEcCCCCEEE
Confidence 99999999999999999999999998755567899999999999999999999 899999999999999999999999
Q ss_pred eccccceecccCCCCc---------------------------ceecccccccccCccccccCCCCCccchHHHHHHHHH
Q 002250 789 ADFGLAKIVQTGEAGD---------------------------LTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLME 841 (947)
Q Consensus 789 ~DfG~a~~~~~~~~~~---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~e 841 (947)
+|||++.......... ......||..|+|||++.+..++.++||||||+++||
T Consensus 145 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~ 224 (316)
T cd05574 145 SDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYE 224 (316)
T ss_pred eecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHH
Confidence 9999986543221100 0112357889999999998889999999999999999
Q ss_pred HHhCCCCCCCCCCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCC----HHHHHH
Q 002250 842 LVTGKRPIVPEFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPS----MRVVVQ 915 (947)
Q Consensus 842 lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt----~~ev~~ 915 (947)
|++|+.||..... ............ ..+. ....+..+.+++.+|+..||++||| +.|+++
T Consensus 225 l~~g~~pf~~~~~-----~~~~~~~~~~~~--------~~~~-~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 225 MLYGTTPFKGSNR-----DETFSNILKKEV--------TFPG-SPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred HhhCCCCCCCCch-----HHHHHHHhcCCc--------cCCC-ccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 9999999853211 111111111111 0111 1114567899999999999999999 555554
No 291
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=5.9e-33 Score=301.24 Aligned_cols=260 Identities=25% Similarity=0.316 Sum_probs=198.9
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
+|...+.||.|++|.||+|... +++.+|+|.+.... .......+.+|++++++++||||++++
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~----------------~~~~~~~~~~e~~~l~~l~h~~iv~~~ 65 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDP----------------NPDLQKQILRELEINKSCKSPYIVKYY 65 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCC----------------chHHHHHHHHHHHHHHhCCCCCeeeee
Confidence 5777889999999999999975 68899999884211 112346688999999999999999999
Q ss_pred EEEecC--CccEEEEeccCCCChHHHhhhc--CCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCC
Q 002250 709 CSITSE--DSNLLVYEYLPNGSLWDRLHTC--HKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEW 784 (947)
Q Consensus 709 ~~~~~~--~~~~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~ 784 (947)
+++... ...++||||+++++|.+++... ....+++.....++.|++.||+||| +.+++|+||+|+||+++.++
T Consensus 66 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH---~~~i~H~dl~~~nil~~~~~ 142 (287)
T cd06621 66 GAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLH---SRKIIHRDIKPSNILLTRKG 142 (287)
T ss_pred eEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEecCC
Confidence 998653 4679999999999999987642 2345788899999999999999999 89999999999999999999
Q ss_pred CeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 002250 785 KPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVY 864 (947)
Q Consensus 785 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~ 864 (947)
.++|+|||++........ ....++..|+|||.+.+..++.++||||+|+++|||++|+.||...........+...
T Consensus 143 ~~~l~dfg~~~~~~~~~~----~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~ 218 (287)
T cd06621 143 QVKLCDFGVSGELVNSLA----GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLS 218 (287)
T ss_pred eEEEeecccccccccccc----ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHH
Confidence 999999999875433221 1335788999999999888999999999999999999999999654211111112211
Q ss_pred hhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 865 SKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 865 ~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
....... ... ... ..........+.+++.+|++.+|++|||+.|+++.
T Consensus 219 ~~~~~~~--~~~-~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 219 YIVNMPN--PEL-KDE-PGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred HHhcCCc--hhh-ccC-CCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 1111110 000 000 11111235678899999999999999999999873
No 292
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=2.4e-33 Score=303.85 Aligned_cols=251 Identities=25% Similarity=0.356 Sum_probs=190.6
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHH-Hhhccccccce
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVAT-LSAVRHVNVVK 706 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~-l~~l~h~niv~ 706 (947)
++|++.+.||+|+||.||+|..+ +|+.||+|++.... .......+..|+.+ ++..+||||++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~----------------~~~~~~~~~~e~~~~~~~~~~~~iv~ 64 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATV----------------NSQEQKRLLMDLDISMRSVDCPYTVT 64 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCC----------------CcHHHHHHHHHHHHHHHHcCCCCeee
Confidence 35788899999999999999965 69999999884221 01122344456554 56678999999
Q ss_pred EEEEEecCCccEEEEeccCCCChHHHhhhc--CCccCCHHHHHHHHHHHHHHHHHHhcCCCC-CeEeccCCCCCeEecCC
Q 002250 707 LYCSITSEDSNLLVYEYLPNGSLWDRLHTC--HKIEMDWVVRYAIAVGAAKGLEYLHHGFDR-PVIHRDVKSSNILLDLE 783 (947)
Q Consensus 707 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~-~ivH~Dlkp~NIll~~~ 783 (947)
+++++..++..++||||++ |+|.+++... ....+++..+..++.|++.|++||| ++ +++||||||+||+++.+
T Consensus 65 ~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~~i~h~dlkp~nil~~~~ 140 (283)
T cd06617 65 FYGALFREGDVWICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLH---SKLSVIHRDVKPSNVLINRN 140 (283)
T ss_pred eeEEEecCCcEEEEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCC
Confidence 9999999999999999996 6888887653 2356899999999999999999999 65 99999999999999999
Q ss_pred CCeEEeccccceecccCCCCcceecccccccccCcccccc----CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccH
Q 002250 784 WKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYT----CKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDI 859 (947)
Q Consensus 784 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~ 859 (947)
+.+||+|||.+....... ......++..|+|||++.+ ..++.++|+||||+++|||++|+.||.........+
T Consensus 141 ~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~ 217 (283)
T cd06617 141 GQVKLCDFGISGYLVDSV---AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQL 217 (283)
T ss_pred CCEEEeeccccccccccc---ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHH
Confidence 999999999987653321 1123457889999998864 446889999999999999999999984321111111
Q ss_pred HHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 860 VNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
........ +.++ ....+..+.+++.+|+..+|++||++.++++
T Consensus 218 ----~~~~~~~~-------~~~~--~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 218 ----KQVVEEPS-------PQLP--AEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred ----HHHHhcCC-------CCCC--ccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11111100 1110 1123456889999999999999999999986
No 293
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=1.9e-33 Score=301.42 Aligned_cols=256 Identities=23% Similarity=0.334 Sum_probs=195.9
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
.+|++.+.||+|+||.||+|... +++.||||++...... .........+.+|+.++++++||||+++
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~------------~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 69 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPES------------PETSKEVNALECEIQLLKNLLHERIVQY 69 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCC------------cccHHHHHHHHHHHHHHHhcCCCCeeeE
Confidence 46788899999999999999965 6899999987321100 0011234578899999999999999999
Q ss_pred EEEEecC--CccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCC
Q 002250 708 YCSITSE--DSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWK 785 (947)
Q Consensus 708 ~~~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~ 785 (947)
++++.++ ...++||||+++++|.+++... ..+++....+++.|++.||+||| +.+++|+||||+||+++.++.
T Consensus 70 ~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~ 144 (265)
T cd06652 70 YGCLRDPMERTLSIFMEHMPGGSIKDQLKSY--GALTENVTRKYTRQILEGVSYLH---SNMIVHRDIKGANILRDSVGN 144 (265)
T ss_pred EeEeccCCCceEEEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEecCCCC
Confidence 9998764 4567999999999999999764 34678888899999999999999 899999999999999999999
Q ss_pred eEEeccccceecccCCCC-cceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 002250 786 PRIADFGLAKIVQTGEAG-DLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVY 864 (947)
Q Consensus 786 ~kl~DfG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~ 864 (947)
++|+|||+++........ .......|+..|+|||++.+..++.++|||||||++|||++|+.||... ...... .
T Consensus 145 ~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~----~~~~~~-~ 219 (265)
T cd06652 145 VKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEF----EAMAAI-F 219 (265)
T ss_pred EEECcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCcc----chHHHH-H
Confidence 999999998755332111 1122345889999999998888999999999999999999999998432 111111 1
Q ss_pred hhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 865 SKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 865 ~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
.... .+.....+......+.+++.+|+. +|++||++.|++++
T Consensus 220 ~~~~---------~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 220 KIAT---------QPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred HHhc---------CCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 1110 011122334445567788888984 89999999999863
No 294
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=3.4e-33 Score=301.25 Aligned_cols=252 Identities=25% Similarity=0.364 Sum_probs=197.9
Q ss_pred hhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-cccccc
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-RHVNVV 705 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv 705 (947)
.++|++.+.||+|++|.||+|..+ +++.+|+|++... ......+.+|+.+++++ +|+||+
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~------------------~~~~~~~~~e~~~l~~~~~h~~i~ 66 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDII------------------EDEEEEIKEEYNILRKYSNHPNIA 66 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecC------------------chhHHHHHHHHHHHHHhcCCCChh
Confidence 478999999999999999999975 6789999987321 12346788999999999 799999
Q ss_pred eEEEEEecCC------ccEEEEeccCCCChHHHhhhcC--CccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCC
Q 002250 706 KLYCSITSED------SNLLVYEYLPNGSLWDRLHTCH--KIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSN 777 (947)
Q Consensus 706 ~l~~~~~~~~------~~~lv~e~~~~gsL~~~l~~~~--~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~N 777 (947)
++++++.... ..++||||+++++|.+++.... ...+++..+..++.|++.||+||| +.+++||||+|+|
T Consensus 67 ~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~~l~p~n 143 (275)
T cd06608 67 TFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLH---ENKVIHRDIKGQN 143 (275)
T ss_pred eEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHH
Confidence 9999997654 3799999999999999987643 457899999999999999999999 8999999999999
Q ss_pred eEecCCCCeEEeccccceecccCCCCcceecccccccccCcccccc-----CCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 002250 778 ILLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYT-----CKINEKSDVYSFGVVLMELVTGKRPIVPE 852 (947)
Q Consensus 778 Ill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slGv~l~elltg~~p~~~~ 852 (947)
|++++++.++|+|||.+........ ......|+..|+|||++.. ..++.++||||||+++|||++|+.||...
T Consensus 144 i~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 221 (275)
T cd06608 144 ILLTKNAEVKLVDFGVSAQLDSTLG--RRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDM 221 (275)
T ss_pred EEEccCCeEEECCCccceecccchh--hhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCcccc
Confidence 9999999999999999876543221 1223458899999998753 34678999999999999999999998532
Q ss_pred CCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 853 FGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 853 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
. ..... ....... .+.. .........+.+++.+|+..||++|||+.++++
T Consensus 222 ~-~~~~~----~~~~~~~-------~~~~-~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 222 H-PMRAL----FKIPRNP-------PPTL-KSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred c-hHHHH----HHhhccC-------CCCC-CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 1 11111 1111100 0011 111224557889999999999999999999986
No 295
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=2e-33 Score=301.19 Aligned_cols=255 Identities=27% Similarity=0.376 Sum_probs=201.6
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
+|++.+.||.|+||.||+|... +++.||+|++.... ......+.+..|++++++++||||++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~---------------~~~~~~~~~~~e~~~l~~l~~~~i~~~~ 65 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGN---------------MTEKEKQQLVSEVNILRELKHPNIVRYY 65 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEeccc---------------CCHHHHHHHHHHHHHHHhcCCCccceee
Confidence 4777889999999999999854 78899999884211 0112345688899999999999999999
Q ss_pred EEEec--CCccEEEEeccCCCChHHHhhhc--CCccCCHHHHHHHHHHHHHHHHHHhcCC--CCCeEeccCCCCCeEecC
Q 002250 709 CSITS--EDSNLLVYEYLPNGSLWDRLHTC--HKIEMDWVVRYAIAVGAAKGLEYLHHGF--DRPVIHRDVKSSNILLDL 782 (947)
Q Consensus 709 ~~~~~--~~~~~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~~ia~~l~yLH~~~--~~~ivH~Dlkp~NIll~~ 782 (947)
+++.. +...+++|||+++++|.+++... ....+++...+.++.|++.|++|||... +.+++||||+|+||+++.
T Consensus 66 ~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~ 145 (265)
T cd08217 66 DRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDA 145 (265)
T ss_pred eeeecCCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEec
Confidence 98764 44578999999999999999764 2456899999999999999999999443 578999999999999999
Q ss_pred CCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHH
Q 002250 783 EWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNW 862 (947)
Q Consensus 783 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~ 862 (947)
++.+|++|||++......... .....+++.|+|||++....++.++|+||||+++|+|++|+.||.... .....+
T Consensus 146 ~~~~kl~d~g~~~~~~~~~~~--~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--~~~~~~- 220 (265)
T cd08217 146 NNNVKLGDFGLAKILGHDSSF--AKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN--QLQLAS- 220 (265)
T ss_pred CCCEEEecccccccccCCccc--ccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC--HHHHHH-
Confidence 999999999999876543321 123468999999999998889999999999999999999999985321 111111
Q ss_pred HHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 863 VYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 863 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
... ....+..+...+..+.+++.+|++.+|++||++.+|+++
T Consensus 221 ---~~~---------~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 221 ---KIK---------EGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred ---HHh---------cCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 111 111222334455678899999999999999999999874
No 296
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=1.1e-33 Score=306.98 Aligned_cols=265 Identities=22% Similarity=0.302 Sum_probs=198.0
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
++|++.+.||+|+||.||+|..+ +++.||+|++.... ......+.+.+|+++++.++||||+++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~---------------~~~~~~~~~~~e~~~l~~l~h~~i~~~ 65 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESE---------------DDKMVKKIAMREIRMLKQLRHENLVNL 65 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhcc---------------CcchhhHHHHHHHHHHHhcCCcchhhH
Confidence 35788899999999999999976 58999999873211 111233567889999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
++++..++..++||||++++++.++.... ..+++.....++.|++.|++||| +.+++||||+|+||++++++.++
T Consensus 66 ~~~~~~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH---~~~i~h~~l~p~ni~~~~~~~~~ 140 (286)
T cd07846 66 IEVFRRKKRLYLVFEFVDHTVLDDLEKYP--NGLDESRVRKYLFQILRGIEFCH---SHNIIHRDIKPENILVSQSGVVK 140 (286)
T ss_pred HHhcccCCeEEEEEecCCccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCcEE
Confidence 99999999999999999999988877653 34899999999999999999999 88999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHh-
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYT-CKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYS- 865 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~- 865 (947)
|+|||++........ ......++..|+|||+..+ ..++.++||||||+++|||++|++||..... .....+....
T Consensus 141 l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~-~~~~~~~~~~~ 217 (286)
T cd07846 141 LCDFGFARTLAAPGE--VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSD-IDQLYHIIKCL 217 (286)
T ss_pred EEeeeeeeeccCCcc--ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCch-HHHHHHHHHHh
Confidence 999999986544321 1123457899999999865 3477899999999999999999988843211 0000010000
Q ss_pred ---------hccccccccccccCCC------CccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 866 ---------KMDSRDSMLTVVDPNI------SEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 866 ---------~~~~~~~~~~~~d~~~------~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
.............+.. .......+..+.+++.+||+.+|++||++.++++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 218 GNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred CCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 0000000000000110 01112335678899999999999999999999863
No 297
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=3e-33 Score=303.59 Aligned_cols=264 Identities=24% Similarity=0.331 Sum_probs=200.1
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
+|++.+.||+|+||.||+|... +|+.||||++..... .......+.+|+.++++++||||++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~---------------~~~~~~~~~~e~~~l~~~~~~~i~~~~ 65 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRL---------------EGGIPNQALREIKALQACQHPYVVKLL 65 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccc---------------cchhhHHHHHHHHHHHhCCCCCCccee
Confidence 4778899999999999999965 789999999842210 112345788999999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRI 788 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 788 (947)
+++..+...++||||+ +++|.+++.... ..+++..+..++.|+++||+||| +.+++|+||||+||+++.++.+++
T Consensus 66 ~~~~~~~~~~~v~e~~-~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~~~~~~~~~l 140 (286)
T cd07832 66 DVFPHGSGFVLVMEYM-PSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMH---ANGIMHRDLKPANLLISADGVLKI 140 (286)
T ss_pred eEEecCCeeEEEeccc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCHHHEEEcCCCcEEE
Confidence 9999999999999999 999999987643 56899999999999999999999 899999999999999999999999
Q ss_pred eccccceecccCCCCcceecccccccccCccccccCC-CCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc
Q 002250 789 ADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCK-INEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKM 867 (947)
Q Consensus 789 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 867 (947)
+|||.+........ .......|+..|+|||++.+.. ++.++||||+|+++|||++|.+||.... .. ..........
T Consensus 141 ~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~-~~-~~~~~~~~~~ 217 (286)
T cd07832 141 ADFGLARLFSEEEP-RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGEN-DI-EQLAIVFRTL 217 (286)
T ss_pred eeeeecccccCCCC-CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCC-HH-HHHHHHHHHc
Confidence 99999986654332 1122346889999999986544 6889999999999999999977764321 11 1111111111
Q ss_pred ccc-----------ccccccccCC-----CCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 868 DSR-----------DSMLTVVDPN-----ISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 868 ~~~-----------~~~~~~~d~~-----~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
... ........+. +.+...+....+.+++.+|++.+|++|||+.+++++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 218 GTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred CCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000 0000000000 011122334778999999999999999999999874
No 298
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.6e-33 Score=306.06 Aligned_cols=250 Identities=24% Similarity=0.361 Sum_probs=196.8
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
+.|.....||+|+||.||++... ++..||||++... .....+.+.+|+.++++++||||+++
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~-----------------~~~~~~~~~~e~~~l~~l~h~~ii~~ 84 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLR-----------------KQQRRELLFNEVVIMRDYHHENVVDM 84 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecc-----------------hHHHHHHHHHHHHHHHhCCCCcHHHH
Confidence 44555677999999999999964 6889999987311 11234568899999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
++.+..++..++||||+++++|.+++.. ..+++.....++.|++.|++||| +.+|+||||||+||++++++.++
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~k 158 (292)
T cd06658 85 YNSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIK 158 (292)
T ss_pred HHheecCCeEEEEEeCCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEE
Confidence 9999999999999999999999998864 34788999999999999999999 88999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKM 867 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 867 (947)
|+|||++........ ......|+..|+|||+.....++.++||||||+++|||++|+.||.... ..........
T Consensus 159 L~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~--~~~~~~~~~~-- 232 (292)
T cd06658 159 LSDFGFCAQVSKEVP--KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEP--PLQAMRRIRD-- 232 (292)
T ss_pred EccCcchhhcccccc--cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHh--
Confidence 999999875433221 1123468899999999988889999999999999999999999985321 1111111100
Q ss_pred cccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 868 DSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 868 ~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
...+... ........+.+++.+|+..||.+|||+.|++++
T Consensus 233 --------~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 233 --------NLPPRVK-DSHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred --------cCCCccc-cccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 0111111 111233457788999999999999999999975
No 299
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=1.6e-33 Score=304.14 Aligned_cols=247 Identities=25% Similarity=0.275 Sum_probs=192.8
Q ss_pred ccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEEEEecCC
Q 002250 637 IGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYCSITSED 715 (947)
Q Consensus 637 iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 715 (947)
||+|+||+||+|... +|+.||+|.+.... .........+.+|++++++++||||+++++++...+
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~--------------~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 66 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKR--------------LKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKD 66 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhh--------------hhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCC
Confidence 699999999999855 68999999884211 111123455678999999999999999999999999
Q ss_pred ccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEeccccce
Q 002250 716 SNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFGLAK 795 (947)
Q Consensus 716 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 795 (947)
..|+||||+++++|.+++.......+++..+..++.|++.|+.||| +.+++||||+|+||++++++.++|+|||.+.
T Consensus 67 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~ 143 (277)
T cd05577 67 DLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLH---QRRIVYRDLKPENVLLDDHGNVRISDLGLAV 143 (277)
T ss_pred eEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEccCcchh
Confidence 9999999999999999998765557899999999999999999999 8999999999999999999999999999987
Q ss_pred ecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhccccccccc
Q 002250 796 IVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDSRDSMLT 875 (947)
Q Consensus 796 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 875 (947)
...... ......++..|+|||+..+..++.++||||+|+++|||++|+.||....... ..... .....
T Consensus 144 ~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~-~~~~~------- 211 (277)
T cd05577 144 ELKGGK---KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKV-EKEEL-KRRTL------- 211 (277)
T ss_pred hhccCC---ccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccc-cHHHH-Hhccc-------
Confidence 654321 1223457889999999988889999999999999999999999985432110 01111 00000
Q ss_pred cccCCCCccCHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 002250 876 VVDPNISEILKEDALKVLRIAIHCTNKLPAFRP-----SMRVVVQ 915 (947)
Q Consensus 876 ~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~ev~~ 915 (947)
......+......+.+++.+|++.+|++|| ++.++++
T Consensus 212 ---~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 212 ---EMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred ---cccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 001112222355688999999999999999 5555553
No 300
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-35 Score=311.84 Aligned_cols=252 Identities=23% Similarity=0.303 Sum_probs=200.3
Q ss_pred hccCCcccccccCceeEEEEEeCC-CcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLNS-GKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
+-|.++..||.|+||.||+|..++ +-..|.|++ ..+.....++|.-||+|++.+.||+||++
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvI-----------------etkseEELEDylVEIeILa~CdHP~ivkL 94 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVI-----------------ETKSEEELEDYLVEIEILAECDHPVIVKL 94 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhh-----------------cccchhHHhhhhhhhhhhhcCCChHHHHH
Confidence 456677789999999999999774 334566765 12233556788999999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
++.|..++..+|+.|||.||.....+-..+ ..+...++.-++.|++.||.||| ++.|||||||+.|||++-+|.++
T Consensus 95 l~ayy~enkLwiliEFC~GGAVDaimlEL~-r~LtE~QIqvvc~q~ldALn~LH---s~~iIHRDLKAGNiL~TldGdir 170 (1187)
T KOG0579|consen 95 LSAYYFENKLWILIEFCGGGAVDAIMLELG-RVLTEDQIQVVCYQVLDALNWLH---SQNIIHRDLKAGNILLTLDGDIR 170 (1187)
T ss_pred HHHHhccCceEEEEeecCCchHhHHHHHhc-cccchHHHHHHHHHHHHHHHHHh---hcchhhhhccccceEEEecCcEe
Confidence 999999999999999999999988877643 46888899999999999999999 99999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCcccc-----ccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHH
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYA-----YTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNW 862 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~ 862 (947)
|+|||.+..... .....+.+.|||.|||||+. +...|++++||||||+++.||..+.+|-. .-...+.
T Consensus 171 LADFGVSAKn~~--t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHh-----elnpMRV 243 (1187)
T KOG0579|consen 171 LADFGVSAKNKS--TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHH-----ELNPMRV 243 (1187)
T ss_pred eecccccccchh--HHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCcc-----ccchHHH
Confidence 999998753221 12234567899999999987 45679999999999999999999999952 2222222
Q ss_pred HHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 863 VYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 863 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
+...... +|..--.+......+.++..+|+.++|..||++++++++
T Consensus 244 llKiaKS--------ePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 244 LLKIAKS--------EPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred HHHHhhc--------CCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence 2221111 111122345666778999999999999999999998753
No 301
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=2.4e-33 Score=303.86 Aligned_cols=264 Identities=23% Similarity=0.285 Sum_probs=197.5
Q ss_pred cCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEE
Q 002250 631 VKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYC 709 (947)
Q Consensus 631 ~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 709 (947)
|+..+.||.|++|.||+|..+ +|+.||||++.... ........+.+|++++++++|||++++++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~---------------~~~~~~~~~~~E~~~l~~l~~~~iv~~~~ 65 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLET---------------EDEGVPSTAIREISLLKELNHPNIVRLLD 65 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeeccc---------------ccccchhHHHHHHHHHHhcCCCCccCHhh
Confidence 567789999999999999965 79999999884221 11123356788999999999999999999
Q ss_pred EEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEe
Q 002250 710 SITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIA 789 (947)
Q Consensus 710 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 789 (947)
++..++..++||||++ ++|.+++.......+++..+..++.|+++||+||| +.+++||||+|+||+++.++.++|+
T Consensus 66 ~~~~~~~~~iv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH---~~~~~H~dl~p~nil~~~~~~~~l~ 141 (283)
T cd07835 66 VVHSENKLYLVFEFLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCH---SHRVLHRDLKPQNLLIDREGALKLA 141 (283)
T ss_pred eeccCCeEEEEEeccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCcEEEe
Confidence 9999999999999995 69999998765557899999999999999999999 8899999999999999999999999
Q ss_pred ccccceecccCCCCcceecccccccccCccccccC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcc
Q 002250 790 DFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTC-KINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMD 868 (947)
Q Consensus 790 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 868 (947)
|||++........ ......++..|+|||++.+. .++.++||||||+++|||++|+.||..... .............
T Consensus 142 df~~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-~~~~~~~~~~~~~ 218 (283)
T cd07835 142 DFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSE-IDQLFRIFRTLGT 218 (283)
T ss_pred ecccccccCCCcc--ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCC
Confidence 9999975433211 11223568899999988664 468899999999999999999999853311 1111111111000
Q ss_pred ccc--------------cccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 869 SRD--------------SMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 869 ~~~--------------~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
... ....................+.+++.+|++.||++|||+.|++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 219 PDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred CChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 000 000000011111122233568899999999999999999999863
No 302
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3e-34 Score=330.57 Aligned_cols=255 Identities=27% Similarity=0.390 Sum_probs=190.5
Q ss_pred HhhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccc
Q 002250 627 IIDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVV 705 (947)
Q Consensus 627 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 705 (947)
...+|+..+.||+|+||.|||++.+ ||+.+|||++.-. . .......+.+|+..+++|+|||||
T Consensus 477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~---------------~-s~~~~skI~rEVk~LArLnHpNVV 540 (1351)
T KOG1035|consen 477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLK---------------A-SDKLYSKILREVKLLARLNHPNVV 540 (1351)
T ss_pred HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCc---------------h-HHHHHHHHHHHHHHHhhcCCccee
Confidence 4567788899999999999999988 8999999998421 1 234456788999999999999999
Q ss_pred eEEEEEec-----------------------------------------------------------------C------
Q 002250 706 KLYCSITS-----------------------------------------------------------------E------ 714 (947)
Q Consensus 706 ~l~~~~~~-----------------------------------------------------------------~------ 714 (947)
+++..+.+ +
T Consensus 541 RYysAWVEs~~~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~ 620 (1351)
T KOG1035|consen 541 RYYSAWVESTAELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEEN 620 (1351)
T ss_pred eeehhhhccCCccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccc
Confidence 99821100 0
Q ss_pred ------------------------------------------------CccEEEEeccCCCChHHHhhhcCCccCCHHHH
Q 002250 715 ------------------------------------------------DSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVR 746 (947)
Q Consensus 715 ------------------------------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~ 746 (947)
...||-||||+...+.++++...... .....
T Consensus 621 ~d~dedg~~~S~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~-~~d~~ 699 (1351)
T KOG1035|consen 621 DDSDEDGRNLSNTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS-QRDEA 699 (1351)
T ss_pred ccccccccccccccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch-hhHHH
Confidence 11478999999888888887643211 46677
Q ss_pred HHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEeccccceecc----------------cCCCCcceeccc
Q 002250 747 YAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFGLAKIVQ----------------TGEAGDLTHVIA 810 (947)
Q Consensus 747 ~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~----------------~~~~~~~~~~~~ 810 (947)
++++.+|+.||+|+| +++||||||||.||+++++..|||+|||+|+... .+......+..+
T Consensus 700 wrLFreIlEGLaYIH---~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~V 776 (1351)
T KOG1035|consen 700 WRLFREILEGLAYIH---DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQV 776 (1351)
T ss_pred HHHHHHHHHHHHHHH---hCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCccccccc
Confidence 889999999999999 8999999999999999999999999999998622 011111234668
Q ss_pred ccccccCccccccC---CCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhccccccccccccCCCCccCHH
Q 002250 811 GTHGYIAPEYAYTC---KINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKE 887 (947)
Q Consensus 811 gt~~y~aPE~~~~~---~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 887 (947)
||.-|+|||++.+. .|+.|+|+||+|||++||+ +||...+ +-...+.... .... |..+.+..+
T Consensus 777 GTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~---yPF~TsM----ERa~iL~~LR-~g~i------P~~~~f~~~ 842 (1351)
T KOG1035|consen 777 GTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEML---YPFGTSM----ERASILTNLR-KGSI------PEPADFFDP 842 (1351)
T ss_pred ceeeeecHHHhcccccccccchhhhHHHHHHHHHHh---ccCCchH----HHHHHHHhcc-cCCC------CCCcccccc
Confidence 99999999998654 4999999999999999998 4664322 2222221111 1111 111333455
Q ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 888 DALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 888 ~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
.++.=.++++++++.||.+|||+.|++.
T Consensus 843 ~~~~e~slI~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 843 EHPEEASLIRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred cchHHHHHHHHHhcCCCccCCCHHHHhh
Confidence 5556678899999999999999999985
No 303
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=6.1e-33 Score=301.94 Aligned_cols=254 Identities=29% Similarity=0.349 Sum_probs=196.5
Q ss_pred HhhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-ccccc
Q 002250 627 IIDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-RHVNV 704 (947)
Q Consensus 627 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~ni 704 (947)
..++|.+.+.||+|+||.||+|... +++.+|+|++... ......+.+|+.+++++ +|||+
T Consensus 20 ~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~------------------~~~~~~~~~e~~~l~~l~~h~ni 81 (291)
T cd06639 20 PTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPI------------------SDVDEEIEAEYNILQSLPNHPNV 81 (291)
T ss_pred CCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccc------------------ccHHHHHHHHHHHHHHhcCCCCe
Confidence 4578999999999999999999964 6889999987311 12235677899999999 89999
Q ss_pred ceEEEEEecC-----CccEEEEeccCCCChHHHhhhc--CCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCC
Q 002250 705 VKLYCSITSE-----DSNLLVYEYLPNGSLWDRLHTC--HKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSN 777 (947)
Q Consensus 705 v~l~~~~~~~-----~~~~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~N 777 (947)
+++++++... +..++||||+++++|.++++.. ....+++..+..++.|++.||+||| +.+++||||||+|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~n 158 (291)
T cd06639 82 VKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLH---NNRIIHRDVKGNN 158 (291)
T ss_pred EEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHH
Confidence 9999998754 3579999999999999988642 3356899999999999999999999 8899999999999
Q ss_pred eEecCCCCeEEeccccceecccCCCCcceecccccccccCccccccCC-----CCCccchHHHHHHHHHHHhCCCCCCCC
Q 002250 778 ILLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCK-----INEKSDVYSFGVVLMELVTGKRPIVPE 852 (947)
Q Consensus 778 Ill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-----~~~~~Dv~slGv~l~elltg~~p~~~~ 852 (947)
|+++.++.++|+|||.+......... .....|+..|+|||++.... ++.++|||||||++|||++|+.||...
T Consensus 159 ili~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~ 236 (291)
T cd06639 159 ILLTTEGGVKLVDFGVSAQLTSTRLR--RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDM 236 (291)
T ss_pred EEEcCCCCEEEeecccchhccccccc--ccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCC
Confidence 99999999999999998765432211 12346889999999875432 678999999999999999999998532
Q ss_pred CCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 853 FGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 853 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
.. ...+..+ ..... ... ....+....+.+++.+|++.+|++||++.|++++
T Consensus 237 ~~-~~~~~~~----~~~~~--~~~------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 237 HP-VKTLFKI----PRNPP--PTL------LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred cH-HHHHHHH----hcCCC--CCC------CcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 11 1111111 00000 001 0112334568899999999999999999999864
No 304
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=4.3e-33 Score=303.13 Aligned_cols=265 Identities=18% Similarity=0.209 Sum_probs=193.8
Q ss_pred hhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccce
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVK 706 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 706 (947)
.+.|.+.+.||+|+||.||+|... +++.||+|++.... .......+.+|+.+++.++|+||++
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~----------------~~~~~~~~~~e~~~l~~l~h~ni~~ 67 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKT----------------EEGVPFTAIREASLLKGLKHANIVL 67 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccC----------------cCCCcHHHHHHHHHHHhcCCCCEeE
Confidence 367888999999999999999854 68999999983211 1122345678999999999999999
Q ss_pred EEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCe
Q 002250 707 LYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKP 786 (947)
Q Consensus 707 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 786 (947)
+++++..++..++||||++ +++.+++... ...+.+.....++.|++.||+||| +.+|+||||||+||+++.++.+
T Consensus 68 ~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nil~~~~~~~ 142 (291)
T cd07870 68 LHDIIHTKETLTFVFEYMH-TDLAQYMIQH-PGGLHPYNVRLFMFQLLRGLAYIH---GQHILHRDLKPQNLLISYLGEL 142 (291)
T ss_pred EEEEEecCCeEEEEEeccc-CCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEEcCCCcE
Confidence 9999999999999999995 6787777653 234677888889999999999999 8899999999999999999999
Q ss_pred EEeccccceecccCCCCcceecccccccccCccccccC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHh
Q 002250 787 RIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTC-KINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYS 865 (947)
Q Consensus 787 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~ 865 (947)
+|+|||+++....... ......++..|+|||++.+. .++.++|||||||++|||++|+.||.........+.+....
T Consensus 143 ~l~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~ 220 (291)
T cd07870 143 KLADFGLARAKSIPSQ--TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTV 220 (291)
T ss_pred EEeccccccccCCCCC--CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHH
Confidence 9999999875433221 11233578999999998754 47889999999999999999999986432111111111000
Q ss_pred hc----------ccccccccccc-----CCCCccCH--HHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 866 KM----------DSRDSMLTVVD-----PNISEILK--EDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 866 ~~----------~~~~~~~~~~d-----~~~~~~~~--~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
.. ........... ........ .....+.+++.+|+..||++|||+.|++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 221 LGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred cCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 00 00000000000 00000000 12456788999999999999999999875
No 305
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=3.9e-33 Score=305.47 Aligned_cols=258 Identities=22% Similarity=0.272 Sum_probs=199.6
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
.|+..+.||+|+||.||++... +++.||+|.+.... .........+.+|+.+++.++||||++++
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~--------------~~~~~~~~~~~~e~~~l~~~~~~~i~~~~ 67 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQN--------------LILRNQIQQVFVERDILTFAENPFVVSMF 67 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhh--------------hhhHHHHHHHHHHHHHHHhCCCCCeeeeE
Confidence 5788899999999999999965 68899999873211 01112345778999999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRI 788 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 788 (947)
+.+..++..++||||+++++|.+++... ..+++.....++.|++.|++||| +.+++||||||+||+++.++.+++
T Consensus 68 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~NIll~~~~~~~l 142 (305)
T cd05609 68 CSFETKRHLCMVMEYVEGGDCATLLKNI--GALPVDMARMYFAETVLALEYLH---NYGIVHRDLKPDNLLITSMGHIKL 142 (305)
T ss_pred EEEecCCEEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHEEECCCCCEEE
Confidence 9999999999999999999999999764 35788888999999999999999 899999999999999999999999
Q ss_pred eccccceecccCCCC-------------cceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCC
Q 002250 789 ADFGLAKIVQTGEAG-------------DLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGD 855 (947)
Q Consensus 789 ~DfG~a~~~~~~~~~-------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~ 855 (947)
+|||+++........ .......++..|+|||++....++.++|+||||+++|||++|+.||...
T Consensus 143 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~--- 219 (305)
T cd05609 143 TDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGD--- 219 (305)
T ss_pred eeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCC---
Confidence 999998642111000 0011235788999999998888999999999999999999999998532
Q ss_pred cccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhc
Q 002250 856 SKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEE 919 (947)
Q Consensus 856 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~ 919 (947)
...+........... .+. .....+..+.+++.+|++.+|++||++.++.+.++.
T Consensus 220 --~~~~~~~~~~~~~~~-----~~~---~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 220 --TPEELFGQVISDDIE-----WPE---GDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred --CHHHHHHHHHhcccC-----CCC---ccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 111221111111100 011 111234567899999999999999998777777766
No 306
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=3.4e-33 Score=304.28 Aligned_cols=249 Identities=24% Similarity=0.342 Sum_probs=196.5
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
.|.....||+|+||.||+|... +++.||||++... .......+.+|+.+++.++||||++++
T Consensus 22 ~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~-----------------~~~~~~~~~~e~~~l~~l~hp~i~~~~ 84 (297)
T cd06659 22 LLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLR-----------------KQQRRELLFNEVVIMRDYQHQNVVEMY 84 (297)
T ss_pred hHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEec-----------------ccchHHHHHHHHHHHHhCCCCchhhhh
Confidence 3444567999999999999965 7899999988321 112345678899999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRI 788 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 788 (947)
+++..++..++||||+++++|.+++.. ..+++..+..++.|++.|++||| +.+++||||||+||+++.++.++|
T Consensus 85 ~~~~~~~~~~iv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dl~p~Nill~~~~~~kL 158 (297)
T cd06659 85 KSYLVGEELWVLMEFLQGGALTDIVSQ---TRLNEEQIATVCESVLQALCYLH---SQGVIHRDIKSDSILLTLDGRVKL 158 (297)
T ss_pred hheeeCCeEEEEEecCCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHeEEccCCcEEE
Confidence 999999999999999999999998765 35789999999999999999999 899999999999999999999999
Q ss_pred eccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcc
Q 002250 789 ADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMD 868 (947)
Q Consensus 789 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 868 (947)
+|||++........ ......|+..|+|||++.+..++.++|||||||++|||++|+.||.... . .........
T Consensus 159 ~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~--~---~~~~~~~~~ 231 (297)
T cd06659 159 SDFGFCAQISKDVP--KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDS--P---VQAMKRLRD 231 (297)
T ss_pred eechhHhhcccccc--cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--H---HHHHHHHhc
Confidence 99999875433221 1223468899999999988889999999999999999999999985321 1 111111111
Q ss_pred ccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 869 SRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 869 ~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
.... ...........+.+++.+|++.+|++||++.+++++
T Consensus 232 ~~~~--------~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 232 SPPP--------KLKNAHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred cCCC--------CccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0000 001111223457889999999999999999999984
No 307
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=5.5e-33 Score=301.95 Aligned_cols=246 Identities=24% Similarity=0.323 Sum_probs=197.7
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
+|++.+.||+|+||.||+|... +++.||+|++.... .........+.+|++++++++||||++++
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~--------------~~~~~~~~~~~~e~~~l~~l~h~~i~~~~ 67 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAK--------------IVKLKQVEHVLNEKRILQSIRHPFLVNLY 67 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHH--------------hhhhhHHHHHHHHHHHHHhCCCCCcccee
Confidence 5788899999999999999965 68999999884211 01112346688999999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRI 788 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 788 (947)
+++..+...++||||+++++|.+++... ..+++..+..++.|++.||+||| +.+++||||+|+||+++.++.+||
T Consensus 68 ~~~~~~~~~~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qil~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl 142 (290)
T cd05580 68 GSFQDDSNLYLVMEYVPGGELFSHLRKS--GRFPEPVARFYAAQVVLALEYLH---SLDIVYRDLKPENLLLDSDGYIKI 142 (290)
T ss_pred eEEEcCCeEEEEEecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEE
Confidence 9999999999999999999999999874 45788899999999999999999 899999999999999999999999
Q ss_pred eccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcc
Q 002250 789 ADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMD 868 (947)
Q Consensus 789 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 868 (947)
+|||++...... .....|++.|+|||.+.+...+.++||||||+++|||++|+.||.... ..........
T Consensus 143 ~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~ 212 (290)
T cd05580 143 TDFGFAKRVKGR-----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDN-----PIQIYEKILE 212 (290)
T ss_pred eeCCCccccCCC-----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHhc
Confidence 999999765443 123468899999999988888899999999999999999999985321 1111111111
Q ss_pred ccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 002250 869 SRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRP-----SMRVVVQ 915 (947)
Q Consensus 869 ~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~ev~~ 915 (947)
... ..+......+.+++.+|+..+|.+|+ ++.|+++
T Consensus 213 ~~~-----------~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 213 GKV-----------RFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred CCc-----------cCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence 111 11222245678899999999999998 6666653
No 308
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-33 Score=310.27 Aligned_cols=276 Identities=23% Similarity=0.317 Sum_probs=204.8
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
.|...+.||+|+||.||+|+.+ +|+.||||.+..-. .....+...+|++++++++|+|||+++
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~----------------~~r~~e~~~~EieilkKLnh~NIVk~f 77 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES----------------SLRPRERWCREIEILKKLNHPNIVKLF 77 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhc----------------ccchHHHHHHHHHHHHHcCchhhhhhc
Confidence 3455678999999999999955 79999999884221 123456678999999999999999999
Q ss_pred EEEecCC------ccEEEEeccCCCChHHHhhhc-CCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEec
Q 002250 709 CSITSED------SNLLVYEYLPNGSLWDRLHTC-HKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLD 781 (947)
Q Consensus 709 ~~~~~~~------~~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~ 781 (947)
+.-++.. ...+|||||++|+|...+.+. ....+++...+.+..+++.||.||| +++||||||||.||++-
T Consensus 78 ~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~Lr---En~IvHRDlKP~NIvl~ 154 (732)
T KOG4250|consen 78 DIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLR---ENGIVHRDLKPGNIVLQ 154 (732)
T ss_pred ccCCccccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHH---HcCceeccCCCCcEEEe
Confidence 8866544 457999999999999999864 3456899999999999999999999 89999999999999984
Q ss_pred --CCC--CeEEeccccceecccCCCCcceecccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCc
Q 002250 782 --LEW--KPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYT-CKINEKSDVYSFGVVLMELVTGKRPIVPEFGDS 856 (947)
Q Consensus 782 --~~~--~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~ 856 (947)
.+| ..||+|||+|+...+.. ....++||..|.+||+... +.|+..+|.|||||++||++||..||.+..+..
T Consensus 155 ~Gedgq~IyKLtDfG~Arel~d~s---~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk 231 (732)
T KOG4250|consen 155 IGEDGQSIYKLTDFGAARELDDNS---LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPK 231 (732)
T ss_pred ecCCCceEEeeecccccccCCCCC---eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCcc
Confidence 333 37999999999876655 3456789999999999984 789999999999999999999999997765432
Q ss_pred ccHHHHHHhhc-cccccccccc----cCC------C---CccCHHHHHHHHHHHHhccCCCCCCCC--CHHHHHHHhhcc
Q 002250 857 KDIVNWVYSKM-DSRDSMLTVV----DPN------I---SEILKEDALKVLRIAIHCTNKLPAFRP--SMRVVVQMLEEA 920 (947)
Q Consensus 857 ~~~~~~~~~~~-~~~~~~~~~~----d~~------~---~~~~~~~~~~l~~l~~~cl~~dP~~RP--t~~ev~~~L~~~ 920 (947)
. ..+.++... .......-.. .+. + ....+.....+......++..+|.+|. .+.+....+..+
T Consensus 232 ~-~~~~~~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dI 310 (732)
T KOG4250|consen 232 N-NKEIMWHIITKKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDI 310 (732)
T ss_pred c-cchhhhhhhccCCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHH
Confidence 1 111111111 1110000000 000 0 112233445566667778888899998 777777766665
Q ss_pred CCCCccee
Q 002250 921 EPCSVTNI 928 (947)
Q Consensus 921 ~~~~~~~~ 928 (947)
...-...+
T Consensus 311 L~~~vvhi 318 (732)
T KOG4250|consen 311 LNLKVVHI 318 (732)
T ss_pred HhhheeEE
Confidence 55444443
No 309
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=6.2e-33 Score=298.04 Aligned_cols=259 Identities=23% Similarity=0.366 Sum_probs=201.4
Q ss_pred ccCCcccccccCceeEEEEEe-CCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVL-NSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
+|+..+.||+|++|.||+|.. .+++.||+|++...... ..........+.+|++++++++|+||++++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~-----------~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~ 69 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNT-----------SSEQEEVVEALRKEIRLMARLNHPHIIRML 69 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCC-----------chhHHHHHHHHHHHHHHHHHcCCCceehhh
Confidence 367788999999999999995 57899999998422110 001112346788999999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCC-CeE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEW-KPR 787 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~-~~k 787 (947)
+++.+.+..++||||+++++|.+++... .++++.....++.|++.||+||| +.+++||||+|+||+++.++ .++
T Consensus 70 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~al~~LH---~~~i~H~~i~~~nil~~~~~~~~~ 144 (268)
T cd06630 70 GATCEDSHFNLFVEWMAGGSVSHLLSKY--GAFKEAVIINYTEQLLRGLSYLH---ENQIIHRDVKGANLLIDSTGQRLR 144 (268)
T ss_pred ceeccCCeEEEEEeccCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEE
Confidence 9999999999999999999999999764 35788999999999999999999 89999999999999998775 599
Q ss_pred EeccccceecccCCCC--cceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHh
Q 002250 788 IADFGLAKIVQTGEAG--DLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYS 865 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~ 865 (947)
|+|||.+......... .......++..|+|||++.+..++.++||||+|+++|||++|..||..... .........
T Consensus 145 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~--~~~~~~~~~ 222 (268)
T cd06630 145 IADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKH--SNHLALIFK 222 (268)
T ss_pred EcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC--cchHHHHHH
Confidence 9999999766443211 112234688999999999888899999999999999999999999853211 111111111
Q ss_pred hccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 866 KMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 866 ~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
.... ....+.+......+.+++.+|+..+|++||++.++++
T Consensus 223 ~~~~---------~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 223 IASA---------TTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred Hhcc---------CCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 1000 0112333445677889999999999999999999985
No 310
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=6.7e-33 Score=302.74 Aligned_cols=266 Identities=21% Similarity=0.270 Sum_probs=198.6
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
+|+..+.||+|+||.||+|... +++.||||++....... ........+..|++++++++|+||++++
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~------------~~~~~~~~~~~e~~~l~~~~h~~i~~~~ 68 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKE------------AKDGINFTALREIKLLQELKHPNIIGLL 68 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEecccccc------------ccchhhHHHHHHHHHHhhcCCCCChhhh
Confidence 3677889999999999999965 68999999985322110 1112335567899999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRI 788 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 788 (947)
+++..++..++||||+ +++|.+++.... ..+++..+..++.|+++||+||| +.+|+||||+|+||+++.++.++|
T Consensus 69 ~~~~~~~~~~lv~e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nill~~~~~~~l 143 (298)
T cd07841 69 DVFGHKSNINLVFEFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLH---SNWILHRDLKPNNLLIASDGVLKL 143 (298)
T ss_pred heeecCCEEEEEEccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCChhhEEEcCCCCEEE
Confidence 9999999999999999 999999998643 36899999999999999999999 899999999999999999999999
Q ss_pred eccccceecccCCCCcceecccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc
Q 002250 789 ADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYT-CKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKM 867 (947)
Q Consensus 789 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 867 (947)
+|||+++....... ......+++.|+|||.+.+ ..++.++|||||||++|||++|.+||.... ....+.... ...
T Consensus 144 ~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~-~~~~~~~~~-~~~ 219 (298)
T cd07841 144 ADFGLARSFGSPNR--KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDS-DIDQLGKIF-EAL 219 (298)
T ss_pred ccceeeeeccCCCc--cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCc-cHHHHHHHH-HHc
Confidence 99999986654321 1122346788999998865 457889999999999999999977764321 111111111 000
Q ss_pred ccc-c-------cccccc------cCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 868 DSR-D-------SMLTVV------DPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 868 ~~~-~-------~~~~~~------d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
... . ...... ..............+.+++.+|++.+|++|||+.|++++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 220 GTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred CCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 000 0 000000 000111223345678899999999999999999999984
No 311
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=4.8e-33 Score=302.62 Aligned_cols=251 Identities=26% Similarity=0.366 Sum_probs=200.3
Q ss_pred hhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccce
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVK 706 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 706 (947)
.++|++.+.||+|+||.||+|... +++.||+|.+.. ......+.+.+|+.++++++||||++
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~-----------------~~~~~~~~~~~e~~~l~~l~hp~i~~ 80 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNL-----------------QQQPKKELIINEILVMRENKHPNIVN 80 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEecc-----------------ccchHHHHHHHHHHHHhhcCCCCeee
Confidence 378899999999999999999854 688999998721 11123466888999999999999999
Q ss_pred EEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCe
Q 002250 707 LYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKP 786 (947)
Q Consensus 707 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 786 (947)
+++++..++..++|+||+++++|.+++.+ ..+++..+..++.|++.|++||| +.+++||||+|+||+++.++.+
T Consensus 81 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH---~~gi~H~dL~p~Nili~~~~~~ 154 (293)
T cd06647 81 YLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSV 154 (293)
T ss_pred hhheeeeCCcEEEEEecCCCCcHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHH---hCCEeeccCCHHHEEEcCCCCE
Confidence 99999999999999999999999999975 24788899999999999999999 8999999999999999999999
Q ss_pred EEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 002250 787 RIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSK 866 (947)
Q Consensus 787 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 866 (947)
+|+|||++......... .....|++.|+|||.+....++.++||||||+++||+++|+.||...... ..+...
T Consensus 155 kL~dfg~~~~~~~~~~~--~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~-----~~~~~~ 227 (293)
T cd06647 155 KLTDFGFCAQITPEQSK--RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL-----RALYLI 227 (293)
T ss_pred EEccCcceecccccccc--cccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChh-----hheeeh
Confidence 99999998765433221 12346888999999998888999999999999999999999998532110 000000
Q ss_pred ccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 867 MDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 867 ~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
..... +. ..........+.+++.+||..+|++||++.+++.+
T Consensus 228 ~~~~~-------~~-~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 228 ATNGT-------PE-LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred hcCCC-------CC-CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000 00 11122334568889999999999999999999975
No 312
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=3.7e-33 Score=303.21 Aligned_cols=255 Identities=26% Similarity=0.332 Sum_probs=193.8
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcc-ccccce
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVR-HVNVVK 706 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~ 706 (947)
++|...+.||+|+||.||++... +++.||||.+.... .......+.+|+.++.++. ||||++
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~----------------~~~~~~~~~~e~~~l~~~~~~~~iv~ 67 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTV----------------DEKEQKRLLMDLDVVMRSSDCPYIVK 67 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhcc----------------ChHHHHHHHHHHHHHHHhcCCCCEee
Confidence 34566788999999999999965 68999999883211 1123456889999999996 999999
Q ss_pred EEEEEecCCccEEEEeccCCCChHHHh---hhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCC
Q 002250 707 LYCSITSEDSNLLVYEYLPNGSLWDRL---HTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLE 783 (947)
Q Consensus 707 l~~~~~~~~~~~lv~e~~~~gsL~~~l---~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~ 783 (947)
+++++..++..+++|||++ +++.++. .......+++.....++.+++.||+|||+ ..+++||||||+||+++.+
T Consensus 68 ~~~~~~~~~~~~~~~e~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~ 144 (288)
T cd06616 68 FYGALFREGDCWICMELMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKE--ELKIIHRDVKPSNILLDRN 144 (288)
T ss_pred eeeEEecCCcEEEEEeccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh--cCCeeccCCCHHHEEEccC
Confidence 9999999999999999985 4655543 33234568999999999999999999993 3589999999999999999
Q ss_pred CCeEEeccccceecccCCCCcceecccccccccCccccccC---CCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHH
Q 002250 784 WKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTC---KINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIV 860 (947)
Q Consensus 784 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~ 860 (947)
+.++|+|||+++....... .....|+..|+|||++... .++.++|||||||++|||++|+.||.... ...
T Consensus 145 ~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~----~~~ 217 (288)
T cd06616 145 GNIKLCDFGISGQLVDSIA---KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN----SVF 217 (288)
T ss_pred CcEEEeecchhHHhccCCc---cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc----hHH
Confidence 9999999999975543221 1223578899999998776 68899999999999999999999984321 121
Q ss_pred HHHHhhccccccccccccCCC-CccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 861 NWVYSKMDSRDSMLTVVDPNI-SEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 861 ~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
........... +.+ ..........+.+++.+|++.+|++|||+.+|+++
T Consensus 218 ~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 218 DQLTQVVKGDP-------PILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred HHHhhhcCCCC-------CcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 21111111110 111 11112345678899999999999999999999874
No 313
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.1e-33 Score=326.08 Aligned_cols=287 Identities=18% Similarity=0.229 Sum_probs=192.2
Q ss_pred HHHhhccCCcccccccCceeEEEEEeC--CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcccc
Q 002250 625 KEIIDAVKPENLIGKGGSGNVYKVVLN--SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHV 702 (947)
Q Consensus 625 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 702 (947)
..+.++|++.+.||+|+||+||++..+ .+..+++|.+.....+.....................+.+|+.++++++||
T Consensus 144 ~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~Hp 223 (501)
T PHA03210 144 DEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHE 223 (501)
T ss_pred hhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCC
Confidence 445688999999999999999998854 233344442211111000000000000111112345688999999999999
Q ss_pred ccceEEEEEecCCccEEEEeccCCCChHHHhhhcC---CccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeE
Q 002250 703 NVVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCH---KIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNIL 779 (947)
Q Consensus 703 niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~---~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIl 779 (947)
||+++++++..++..|+|+|++ ++++.+++.... ...........++.|++.||+||| +.+||||||||+|||
T Consensus 224 nIv~l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH---~~gIiHrDLKP~NIL 299 (501)
T PHA03210 224 NILKIEEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIH---DKKLIHRDIKLENIF 299 (501)
T ss_pred CcCcEeEEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEE
Confidence 9999999999999999999999 457777775421 112334556789999999999999 899999999999999
Q ss_pred ecCCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCC-C-cc
Q 002250 780 LDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFG-D-SK 857 (947)
Q Consensus 780 l~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~-~-~~ 857 (947)
++.++.+||+|||+++........ ......||..|+|||++.+..++.++|||||||++|||++|..++..... . ..
T Consensus 300 l~~~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~ 378 (501)
T PHA03210 300 LNCDGKIVLGDFGTAMPFEKEREA-FDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGK 378 (501)
T ss_pred ECCCCCEEEEeCCCceecCccccc-ccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHH
Confidence 999999999999999876543221 12235799999999999998999999999999999999998765432211 1 11
Q ss_pred cHHHHHHhhcccccccc-------cccc--------CCCCccCH--HHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 858 DIVNWVYSKMDSRDSML-------TVVD--------PNISEILK--EDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 858 ~~~~~~~~~~~~~~~~~-------~~~d--------~~~~~~~~--~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
.+.+...........+. ..++ ..++.... .....+.+++.+|++.||.+|||+.|++++
T Consensus 379 ~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 379 QLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred HHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 11111111000000000 0000 00000000 112356778889999999999999999864
No 314
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=6.5e-33 Score=300.62 Aligned_cols=262 Identities=22% Similarity=0.304 Sum_probs=196.7
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
+|+..+.||+|++|.||+|+.. +|+.||||++.... .......+.+|++++++++||||++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~----------------~~~~~~~~~~E~~~l~~l~h~~i~~~~ 64 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDA----------------EEGTPSTAIREISLMKELKHENIVRLH 64 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccc----------------cccchHHHHHHHHHHHhhcCCCEeeee
Confidence 4778899999999999999975 68999999984221 112345677899999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcC-CccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCH-KIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
+++...+..++||||+++ +|.+++.... ...+++..+..++.|++.||+||| +.+++||||+|+||++++++.++
T Consensus 65 ~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~h~dl~p~ni~~~~~~~~~ 140 (284)
T cd07836 65 DVIHTENKLMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCH---ENRVLHRDLKPQNLLINKRGELK 140 (284)
T ss_pred eeEeeCCcEEEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCcEE
Confidence 999999999999999975 8888887543 346899999999999999999999 88999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccccC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTC-KINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSK 866 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 866 (947)
++|||+++....... ......++..|+|||++.+. .++.++||||||+++|||++|+.||..... .+........
T Consensus 141 l~d~g~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~--~~~~~~~~~~ 216 (284)
T cd07836 141 LADFGLARAFGIPVN--TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNN--EDQLLKIFRI 216 (284)
T ss_pred EeecchhhhhcCCcc--ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCc--HHHHHHHHHH
Confidence 999999975433211 11223568899999988654 468899999999999999999999854321 1111110000
Q ss_pred c-----------cccccccc----cccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 867 M-----------DSRDSMLT----VVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 867 ~-----------~~~~~~~~----~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
. ........ ..+.............+.+++.+|++.||++||++.|+++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 217 MGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred hCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0 00000000 0000001112233556889999999999999999999985
No 315
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=5.2e-33 Score=297.89 Aligned_cols=252 Identities=30% Similarity=0.414 Sum_probs=204.5
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
+|++.+.||+|++|.||+|... +++.||||++.... .......+.+|+.++.+++|+||++++
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~----------------~~~~~~~~~~e~~~l~~l~~~~i~~~~ 65 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDG----------------DEEFRKQLLRELKTLRSCESPYVVKCY 65 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCc----------------chHHHHHHHHHHHHHHhcCCCCeeeEE
Confidence 5778899999999999999976 59999999984221 012346789999999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCC-CCeEeccCCCCCeEecCCCCeE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFD-RPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~-~~ivH~Dlkp~NIll~~~~~~k 787 (947)
+++..++..++||||+++++|.+++... ..+++..+..++.|+++|++||| + .+++||||+|+||+++.++.++
T Consensus 66 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh---~~~~~~H~~l~~~ni~~~~~~~~~ 140 (264)
T cd06623 66 GAFYKEGEISIVLEYMDGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLH---TKRHIIHRDIKPSNLLINSKGEVK 140 (264)
T ss_pred EEEccCCeEEEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHh---ccCCCccCCCCHHHEEECCCCCEE
Confidence 9999999999999999999999999864 56899999999999999999999 8 9999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKM 867 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 867 (947)
|+|||.+.......... ....++..|+|||.+.+..++.++|+||||+++|||++|+.||..... ....+......
T Consensus 141 l~df~~~~~~~~~~~~~--~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~--~~~~~~~~~~~ 216 (264)
T cd06623 141 IADFGISKVLENTLDQC--NTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQ--PSFFELMQAIC 216 (264)
T ss_pred EccCccceecccCCCcc--cceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccc--cCHHHHHHHHh
Confidence 99999998665433221 134578899999999988899999999999999999999999854321 12222221111
Q ss_pred cccccccccccCCCCccCHH-HHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 868 DSRDSMLTVVDPNISEILKE-DALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 868 ~~~~~~~~~~d~~~~~~~~~-~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
. ......... .+..+.+++.+|++.+|++||++.|++++
T Consensus 217 ~----------~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 217 D----------GPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred c----------CCCCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 1 111122222 45678899999999999999999999874
No 316
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=1.1e-32 Score=298.51 Aligned_cols=259 Identities=19% Similarity=0.213 Sum_probs=192.9
Q ss_pred cCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcc-ccccceEE
Q 002250 631 VKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVR-HVNVVKLY 708 (947)
Q Consensus 631 ~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~ 708 (947)
|++.+.||+|+||.||+|... +++.||+|++.... .........+|+.+++++. |+|+++++
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~----------------~~~~~~~~~~e~~~l~~l~~h~~i~~~~ 64 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHF----------------KSLEQVNNLREIQALRRLSPHPNILRLI 64 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhcc----------------CCchhhhHHHHHHHHhhcCCCCCccceE
Confidence 567788999999999999954 68999999874211 1112223457888999885 99999999
Q ss_pred EEEecC--CccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCe
Q 002250 709 CSITSE--DSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKP 786 (947)
Q Consensus 709 ~~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 786 (947)
+++.++ +..++||||++ +++.+++.... ..+++..+..++.|++.||+||| +.+++||||+|+||+++. +.+
T Consensus 65 ~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~p~ni~l~~-~~~ 138 (282)
T cd07831 65 EVLFDRKTGRLALVFELMD-MNLYELIKGRK-RPLPEKRVKSYMYQLLKSLDHMH---RNGIFHRDIKPENILIKD-DIL 138 (282)
T ss_pred EEEecCCCCcEEEEEecCC-ccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEcC-CCe
Confidence 999987 88999999996 58888887532 46899999999999999999999 889999999999999999 999
Q ss_pred EEeccccceecccCCCCcceecccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHh
Q 002250 787 RIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYT-CKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYS 865 (947)
Q Consensus 787 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~ 865 (947)
||+|||.++........ ....++..|+|||++.. +.++.++||||+||++|||++|+.||.... ..+.......
T Consensus 139 kl~dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~--~~~~~~~~~~ 213 (282)
T cd07831 139 KLADFGSCRGIYSKPPY---TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTN--ELDQIAKIHD 213 (282)
T ss_pred EEEecccccccccCCCc---CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCC--HHHHHHHHHH
Confidence 99999999765433221 12357889999997654 457889999999999999999999985321 1111111111
Q ss_pred hccc-----------ccc----ccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 866 KMDS-----------RDS----MLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 866 ~~~~-----------~~~----~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
.... ... ........+.......+..+.+++.+|++.+|++||++.+++++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 214 VLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred HcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 1100 000 00001111112223456789999999999999999999999864
No 317
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=5.2e-33 Score=297.93 Aligned_cols=254 Identities=28% Similarity=0.387 Sum_probs=199.9
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
+|+..+.||+|+||.||+|... +++.||+|.+..... .......+.+|+.++++++|+||++++
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~---------------~~~~~~~~~~e~~~~~~l~~~~i~~~~ 65 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDN---------------DPKTIKEIADEMKVLELLKHPNLVKYY 65 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECccc---------------chHHHHHHHHHHHHHHhCCCCChhhee
Confidence 4778899999999999999965 789999999842211 113457789999999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRI 788 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 788 (947)
+++...+..++|+||+++++|.+++... ..+++..+..++.++++|++||| +.+++|+||+|+||++++++.+||
T Consensus 66 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~kl 140 (264)
T cd06626 66 GVEVHREKVYIFMEYCSGGTLEELLEHG--RILDEHVIRVYTLQLLEGLAYLH---SHGIVHRDIKPANIFLDHNGVIKL 140 (264)
T ss_pred eeEecCCEEEEEEecCCCCcHHHHHhhc--CCCChHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEE
Confidence 9999999999999999999999999863 34788889999999999999999 899999999999999999999999
Q ss_pred eccccceecccCCCCcc--eecccccccccCccccccCC---CCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHH
Q 002250 789 ADFGLAKIVQTGEAGDL--THVIAGTHGYIAPEYAYTCK---INEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWV 863 (947)
Q Consensus 789 ~DfG~a~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~ 863 (947)
+|||.+........... .....++..|+|||++.... ++.++||||||+++|||++|+.||..... -....
T Consensus 141 ~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~----~~~~~ 216 (264)
T cd06626 141 GDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDN----EFQIM 216 (264)
T ss_pred cccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcc----hHHHH
Confidence 99999987654332111 11245788999999998766 88999999999999999999999853221 11111
Q ss_pred HhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 864 YSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 864 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
....... .+.++.. ......+.+++.+|++.+|++|||+.+++.
T Consensus 217 ~~~~~~~-------~~~~~~~-~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 217 FHVGAGH-------KPPIPDS-LQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred HHHhcCC-------CCCCCcc-cccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 1111100 1111111 122456778999999999999999999875
No 318
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=3.8e-33 Score=303.18 Aligned_cols=264 Identities=21% Similarity=0.242 Sum_probs=198.9
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
+|++.+.||+|+||.||+|..+ +++.||||++.... ........+.+|++++++++|+||++++
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~---------------~~~~~~~~~~~e~~~l~~l~~~~i~~~~ 66 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESE---------------DDEDVKKTALREVKVLRQLRHENIVNLK 66 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhc---------------ccccchhHHHHHHHHHHhcCCCCeeehh
Confidence 5788899999999999999966 68899999873211 1123346788999999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRI 788 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 788 (947)
+++..++..++||||++++.+..+... ...+++.....++.|++.|++||| ..+++||||+|+||++++++.++|
T Consensus 67 ~~~~~~~~~~iv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~ni~~~~~~~~kl 141 (288)
T cd07833 67 EAFRRKGRLYLVFEYVERTLLELLEAS--PGGLPPDAVRSYIWQLLQAIAYCH---SHNIIHRDIKPENILVSESGVLKL 141 (288)
T ss_pred heEEECCEEEEEEecCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEE
Confidence 999999999999999998777665554 244789999999999999999999 889999999999999999999999
Q ss_pred eccccceecccCCCCcceecccccccccCccccccC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhh-
Q 002250 789 ADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTC-KINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSK- 866 (947)
Q Consensus 789 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~- 866 (947)
+|||.+.......... .....++..|+|||++.+. .++.++||||||+++|||++|+.||..... ...+.......
T Consensus 142 ~d~g~~~~~~~~~~~~-~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~-~~~~~~~~~~~~ 219 (288)
T cd07833 142 CDFGFARALRARPASP-LTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSD-IDQLYLIQKCLG 219 (288)
T ss_pred EeeecccccCCCcccc-ccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhC
Confidence 9999998665443211 1234678899999999888 788999999999999999999999853211 11111100000
Q ss_pred ---------cccccc-----ccccccCCC--CccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 867 ---------MDSRDS-----MLTVVDPNI--SEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 867 ---------~~~~~~-----~~~~~d~~~--~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
...... +....++.. ...+...+..+.+++.+||+.+|++||+++++++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 220 PLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred CCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 000000 000000000 0112223677899999999999999999999986
No 319
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=8.8e-33 Score=301.00 Aligned_cols=265 Identities=22% Similarity=0.234 Sum_probs=196.9
Q ss_pred hhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccce
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVK 706 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 706 (947)
.+.|+..+.||+|+||.||+|..+ +++.+|+|.+..... .......+.+|+.++++++||||++
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---------------~~~~~~~~~~e~~~l~~l~h~ni~~ 68 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKE---------------KEGFPITSLREINILLKLQHPNIVT 68 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccc---------------cccchhhHHHHHHHHHhcCCCCEEE
Confidence 367888999999999999999976 688999999842211 1122345678999999999999999
Q ss_pred EEEEEecC--CccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCC
Q 002250 707 LYCSITSE--DSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEW 784 (947)
Q Consensus 707 l~~~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~ 784 (947)
+++++..+ ...|+||||++ ++|.+++.... ..+++.....++.|++.||+||| +.+++||||||+||+++.++
T Consensus 69 ~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~ 143 (293)
T cd07843 69 VKEVVVGSNLDKIYMVMEYVE-HDLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLH---DNWILHRDLKTSNLLLNNRG 143 (293)
T ss_pred EEEEEEecCCCcEEEEehhcC-cCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCC
Confidence 99998877 88999999996 59999887643 36899999999999999999999 88999999999999999999
Q ss_pred CeEEeccccceecccCCCCcceecccccccccCccccccCC-CCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHH
Q 002250 785 KPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCK-INEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWV 863 (947)
Q Consensus 785 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~ 863 (947)
.++|+|||++........ ......+++.|+|||.+.+.. ++.++|+||+|+++|||++|+.||..... .+...-.
T Consensus 144 ~~~l~d~g~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~--~~~~~~~ 219 (293)
T cd07843 144 ILKICDFGLAREYGSPLK--PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSE--IDQLNKI 219 (293)
T ss_pred cEEEeecCceeeccCCcc--ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHH
Confidence 999999999986654321 112335788999999887544 68899999999999999999999853211 0000000
Q ss_pred Hhhcc-----------cc-----ccccccccCCC-CccCHH-HHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 864 YSKMD-----------SR-----DSMLTVVDPNI-SEILKE-DALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 864 ~~~~~-----------~~-----~~~~~~~d~~~-~~~~~~-~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
..... .. ..........+ ..+... ....+.+++.+|++.+|++|||+.|++++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 220 FKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred HHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 00000 00 00000000011 111111 25567889999999999999999999863
No 320
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=1.3e-32 Score=297.94 Aligned_cols=249 Identities=25% Similarity=0.369 Sum_probs=197.7
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
.|...+.||+|++|.||+|... +++.+|+|++... .....+.+.+|+.+++.++||||++++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~-----------------~~~~~~~~~~e~~~l~~~~h~~vv~~~ 82 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLR-----------------KQQRRELLFNEVVIMRDYQHPNIVEMY 82 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEecc-----------------chhHHHHHHHHHHHHHHcCCCChheEE
Confidence 4555678999999999999954 7899999987311 112235578999999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRI 788 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 788 (947)
+++..++..++|+||+++++|.+++.. ..+++..+..++.|++.|++||| +.+++||||+|+||+++.++.+++
T Consensus 83 ~~~~~~~~~~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l 156 (285)
T cd06648 83 SSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIATVCLAVLKALSFLH---AQGVIHRDIKSDSILLTSDGRVKL 156 (285)
T ss_pred EEEEcCCeEEEEEeccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChhhEEEcCCCcEEE
Confidence 999999999999999999999999876 35788999999999999999999 899999999999999999999999
Q ss_pred eccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcc
Q 002250 789 ADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMD 868 (947)
Q Consensus 789 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 868 (947)
+|||.+........ ......|++.|+|||...+..++.++||||||+++|||++|+.||... +..........
T Consensus 157 ~d~g~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~-----~~~~~~~~~~~ 229 (285)
T cd06648 157 SDFGFCAQVSKEVP--RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNE-----PPLQAMKRIRD 229 (285)
T ss_pred cccccchhhccCCc--ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCC-----CHHHHHHHHHh
Confidence 99998875433221 112345889999999998888999999999999999999999998532 11222211111
Q ss_pred ccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 869 SRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 869 ~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
... +.. ......+..+.+++.+|++.+|++|||+.+++++
T Consensus 230 ~~~-------~~~-~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 269 (285)
T cd06648 230 NLP-------PKL-KNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNH 269 (285)
T ss_pred cCC-------CCC-cccccCCHHHHHHHHHHcccChhhCcCHHHHccC
Confidence 110 011 1111234578999999999999999999999963
No 321
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=1.6e-32 Score=293.07 Aligned_cols=254 Identities=28% Similarity=0.398 Sum_probs=205.8
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
+|+..+.||+|++|.||+|... +++.|++|++..... .....+.+.+|++++++++||||++++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---------------~~~~~~~~~~e~~~l~~l~~~~i~~~~ 65 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGD---------------SEEELEALEREIRILSSLQHPNIVRYY 65 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeecccc---------------chHHHHHHHHHHHHHHHcCCCCEeeEE
Confidence 3677889999999999999976 789999999842211 123457789999999999999999999
Q ss_pred EEEecC--CccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCe
Q 002250 709 CSITSE--DSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKP 786 (947)
Q Consensus 709 ~~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 786 (947)
+.+... ...++|+||+++++|.+++.... .+++..+..++.|++.|++||| +.+++|+||+|+||+++.++.+
T Consensus 66 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh---~~~~~h~dl~p~ni~i~~~~~~ 140 (260)
T cd06606 66 GSERDEEKNTLNIFLEYVSGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLH---SNGIVHRDIKGANILVDSDGVV 140 (260)
T ss_pred EEEecCCCCeEEEEEEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCE
Confidence 999988 88999999999999999998744 7899999999999999999999 8999999999999999999999
Q ss_pred EEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 002250 787 RIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSK 866 (947)
Q Consensus 787 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 866 (947)
+|+|||.+................++..|+|||.......+.++||||||+++|||++|..||.... +........
T Consensus 141 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~----~~~~~~~~~ 216 (260)
T cd06606 141 KLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG----NPMAALYKI 216 (260)
T ss_pred EEcccccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----chHHHHHhc
Confidence 9999999987665443211234568899999999988889999999999999999999999985432 111111111
Q ss_pred ccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 867 MDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 867 ~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
... ......+...+..+.+++.+|++.+|++||++.++++.
T Consensus 217 ~~~---------~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 217 GSS---------GEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred ccc---------CCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence 110 11122333446778999999999999999999999863
No 322
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-34 Score=280.11 Aligned_cols=259 Identities=21% Similarity=0.264 Sum_probs=205.6
Q ss_pred ccHHHHhhccCCc-ccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc
Q 002250 622 FSEKEIIDAVKPE-NLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV 699 (947)
Q Consensus 622 ~~~~~~~~~~~~~-~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 699 (947)
+.+-.++++|++. ++||-|-.|.|-.+..+ +++.+|+|++ .+....++|++..-..
T Consensus 54 ~k~~~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL----------------------~Ds~KARrEVeLHw~~ 111 (400)
T KOG0604|consen 54 FKEYSITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVL----------------------LDSPKARREVELHWMA 111 (400)
T ss_pred hhcccchhhheehhhhhccccCCceEEEEeccchhhhHHHHH----------------------hcCHHHHhHhhhhhhh
Confidence 3445567888774 67999999999999966 7899999988 3445667888876555
Q ss_pred -cccccceEEEEEec----CCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCC
Q 002250 700 -RHVNVVKLYCSITS----EDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVK 774 (947)
Q Consensus 700 -~h~niv~l~~~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlk 774 (947)
.|||||.++++|+. .....+|||.|+||.|.+.+...+...+++...-.|+.||+.|+.||| +..|.|||||
T Consensus 112 s~h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH---~~nIAHRDlK 188 (400)
T KOG0604|consen 112 SGHPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLH---SMNIAHRDLK 188 (400)
T ss_pred cCCCceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHH---hcchhhccCC
Confidence 69999999998865 345679999999999999999988889999999999999999999999 8999999999
Q ss_pred CCCeEec---CCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCC
Q 002250 775 SSNILLD---LEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVP 851 (947)
Q Consensus 775 p~NIll~---~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~ 851 (947)
|+|+|.. .+..+||+|||+|+.-..... ....+-|+.|.|||++-..+|+...|+||+||++|-|++|.+||+.
T Consensus 189 pENLLyt~t~~na~lKLtDfGFAK~t~~~~~---L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS 265 (400)
T KOG0604|consen 189 PENLLYTTTSPNAPLKLTDFGFAKETQEPGD---LMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS 265 (400)
T ss_pred hhheeeecCCCCcceEecccccccccCCCcc---ccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccc
Confidence 9999996 456799999999986543222 2234679999999999999999999999999999999999999976
Q ss_pred CCCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 852 EFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 852 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
..+ ..+..-++.++....- ....+......+...++++..++.+|++|.|+.|++.+
T Consensus 266 ~hg--~aispgMk~rI~~gqy------~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 266 NHG--LAISPGMKRRIRTGQY------EFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH 322 (400)
T ss_pred cCC--ccCChhHHhHhhccCc------cCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence 543 2222222222211110 01123345566778889999999999999999999853
No 323
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=2.1e-32 Score=301.20 Aligned_cols=257 Identities=27% Similarity=0.353 Sum_probs=200.1
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
..|+..+.||+|+||.||+|+.. +++.||+|++..... ........+.+|++++++++|||++++
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~--------------~~~~~~~~~~~e~~~l~~l~h~~iv~~ 90 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGK--------------QSNEKWQDIIKEVKFLQRIKHPNSIEY 90 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCC--------------CchHHHHHHHHHHHHHHhCCCCCEEEE
Confidence 44778889999999999999965 688999998832110 011233568889999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
++++..+...++||||++ |++.+.+... ...+++..+..++.|++.|+.||| +.+|+||||+|+||+++.++.++
T Consensus 91 ~~~~~~~~~~~lv~e~~~-g~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH---~~~i~H~dL~p~Nil~~~~~~~k 165 (317)
T cd06635 91 KGCYLREHTAWLVMEYCL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVK 165 (317)
T ss_pred EEEEeeCCeEEEEEeCCC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcccEEECCCCCEE
Confidence 999999999999999996 5788877643 345899999999999999999999 89999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccc---cCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAY---TCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVY 864 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~ 864 (947)
|+|||++...... ....|++.|+|||++. .+.++.++|||||||++|||++|+.||... +......
T Consensus 166 l~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~-----~~~~~~~ 234 (317)
T cd06635 166 LADFGSASIASPA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM-----NAMSALY 234 (317)
T ss_pred EecCCCccccCCc------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCc-----cHHHHHH
Confidence 9999998754332 2345788999999974 456889999999999999999999998532 1111111
Q ss_pred hhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCCCC
Q 002250 865 SKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAEPCS 924 (947)
Q Consensus 865 ~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 924 (947)
....... ...........+.+++.+|++.+|.+||++.+++++...+...+
T Consensus 235 ~~~~~~~---------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 285 (317)
T cd06635 235 HIAQNES---------PTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERP 285 (317)
T ss_pred HHHhccC---------CCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccCc
Confidence 1111110 01111233456888999999999999999999999876655544
No 324
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-34 Score=295.13 Aligned_cols=248 Identities=25% Similarity=0.304 Sum_probs=198.7
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
+.|+.-++||+|+||.||-++.+ +|+-+|.|++.. ..+ +......-...|-.|+++++.+.||.+
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~K------------KRi--Kkr~ge~maLnEk~iL~kV~s~FiVsl 250 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDK------------KRI--KKRKGETMALNEKQILEKVSSPFIVSL 250 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHH------------HHH--HHhhhhHHhhHHHHHHHHhccCcEEEE
Confidence 45677789999999999999865 689999998721 111 122333455689999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
--.|+.++..++|+..|.||+|.-++...+...+++..+.-.|.+|+.||++|| ..+||.||+||+|||+|+.|+++
T Consensus 251 aYAfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH---~~~iVYRDLKPeNILLDd~GhvR 327 (591)
T KOG0986|consen 251 AYAFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLH---RRRIVYRDLKPENILLDDHGHVR 327 (591)
T ss_pred eeeecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHH---hcceeeccCChhheeeccCCCeE
Confidence 888999999999999999999999998888778999999999999999999999 89999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCc--ccHHHHHHh
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDS--KDIVNWVYS 865 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~--~~~~~~~~~ 865 (947)
|+|.|+|..+..++... ..+||.+|||||++.++.|+...|.||+||++|||+.|+.||...-... .++.+.
T Consensus 328 ISDLGLAvei~~g~~~~---~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr--- 401 (591)
T KOG0986|consen 328 ISDLGLAVEIPEGKPIR---GRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRR--- 401 (591)
T ss_pred eeccceEEecCCCCccc---cccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHH---
Confidence 99999999887766533 3489999999999999999999999999999999999999995431110 011110
Q ss_pred hccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCH
Q 002250 866 KMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSM 910 (947)
Q Consensus 866 ~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~ 910 (947)
..... .++.+.-.++..++....+.+||++|...
T Consensus 402 ~~~~~-----------~ey~~kFS~eakslc~~LL~Kdp~~RLGc 435 (591)
T KOG0986|consen 402 TLEDP-----------EEYSDKFSEEAKSLCEGLLTKDPEKRLGC 435 (591)
T ss_pred Hhcch-----------hhcccccCHHHHHHHHHHHccCHHHhccC
Confidence 00000 12223334456677778899999999743
No 325
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1.7e-32 Score=297.77 Aligned_cols=262 Identities=24% Similarity=0.261 Sum_probs=196.4
Q ss_pred cCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc---cccccce
Q 002250 631 VKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV---RHVNVVK 706 (947)
Q Consensus 631 ~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~ 706 (947)
|++.+.||+|+||.||+|+.+ +++.||||++..... .......+.+|+.+++++ +|||+++
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~---------------~~~~~~~~~~e~~~l~~l~~~~h~~i~~ 65 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLS---------------EEGIPLSTLREIALLKQLESFEHPNIVR 65 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccc---------------cchhhhhHHHHHHHHHHhhccCCCCcce
Confidence 567789999999999999976 589999999842211 111223456677777666 5999999
Q ss_pred EEEEEecCCc-----cEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEec
Q 002250 707 LYCSITSEDS-----NLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLD 781 (947)
Q Consensus 707 l~~~~~~~~~-----~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~ 781 (947)
+++++...+. .+++|||++ ++|.+++.......+++..+..++.|++.||+||| +.+++|+||+|+||+++
T Consensus 66 ~~~~~~~~~~~~~~~~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH---~~~i~h~~l~~~nili~ 141 (287)
T cd07838 66 LLDVCHGPRTDRELKLTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLH---SHRIVHRDLKPQNILVT 141 (287)
T ss_pred EEEEEeeccCCCCceeEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhEEEc
Confidence 9999988776 899999996 58999988755556899999999999999999999 88999999999999999
Q ss_pred CCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHH
Q 002250 782 LEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVN 861 (947)
Q Consensus 782 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~ 861 (947)
.++.++|+|||.+......... ....++..|+|||++.+..++.++||||||+++|||++|+.||.... ....+..
T Consensus 142 ~~~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~-~~~~~~~ 217 (287)
T cd07838 142 SDGQVKIADFGLARIYSFEMAL---TSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTS-EADQLDK 217 (287)
T ss_pred cCCCEEEeccCcceeccCCccc---ccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCC-hHHHHHH
Confidence 9999999999999776443221 12347889999999998889999999999999999999998885321 1111111
Q ss_pred HHHhhcc-c-----------cccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 862 WVYSKMD-S-----------RDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 862 ~~~~~~~-~-----------~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
+...... . .................+....+.+++.+||+.||++||++.|+++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 218 IFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred HHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 1110000 0 0000000111112223344567889999999999999999999985
No 326
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=1.1e-32 Score=306.37 Aligned_cols=268 Identities=24% Similarity=0.320 Sum_probs=198.2
Q ss_pred HHhhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-cccc
Q 002250 626 EIIDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-RHVN 703 (947)
Q Consensus 626 ~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~n 703 (947)
.+.++|++.+.||+|+||.||+|... +++.+|||++.... ........+.+|+.+++++ +|||
T Consensus 4 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~---------------~~~~~~~~~~~E~~~l~~l~~h~n 68 (337)
T cd07852 4 HILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAF---------------RNATDAQRTFREIMFLQELGDHPN 68 (337)
T ss_pred hhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeecccc---------------CcchhhhhhhHHHHHHHHhcCCCC
Confidence 45688999999999999999999965 68899999884211 0112234567899999999 9999
Q ss_pred cceEEEEEecCC--ccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEec
Q 002250 704 VVKLYCSITSED--SNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLD 781 (947)
Q Consensus 704 iv~l~~~~~~~~--~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~ 781 (947)
|+++++++...+ ..++||||++ ++|.+++... .+++..+..++.|++.||+||| +.+|+||||||+||+++
T Consensus 69 i~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH---~~~i~H~dl~p~nill~ 141 (337)
T cd07852 69 IVKLLNVIKAENDKDIYLVFEYME-TDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIH---SGNVIHRDLKPSNILLN 141 (337)
T ss_pred ccceeeeeccCCCceEEEEecccc-cCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEc
Confidence 999999986543 5799999996 5999988763 6788999999999999999999 89999999999999999
Q ss_pred CCCCeEEeccccceecccCCCC---cceecccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcc
Q 002250 782 LEWKPRIADFGLAKIVQTGEAG---DLTHVIAGTHGYIAPEYAYT-CKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSK 857 (947)
Q Consensus 782 ~~~~~kl~DfG~a~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~ 857 (947)
.++.+||+|||++......... .......|+..|+|||++.. ..++.++||||||+++|||++|+.||...... .
T Consensus 142 ~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~-~ 220 (337)
T cd07852 142 SDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTL-N 220 (337)
T ss_pred CCCcEEEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChH-H
Confidence 9999999999999865443221 12223468899999998755 45788999999999999999999998532110 0
Q ss_pred cHHHHHHhhc------------cccc-ccccccc---CCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 858 DIVNWVYSKM------------DSRD-SMLTVVD---PNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 858 ~~~~~~~~~~------------~~~~-~~~~~~d---~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
.......... .... .+..... ..........+..+.+++.+|++.||++|||+.+++++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 221 QLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 0000000000 0000 0000000 01111122245678999999999999999999999975
No 327
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=8.7e-33 Score=301.20 Aligned_cols=265 Identities=22% Similarity=0.268 Sum_probs=195.7
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
++|+..+.||+|++|+||+|..+ +++.||+|.+.... ........+.+|++++++++||||+++
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~---------------~~~~~~~~~~~e~~~l~~l~h~~i~~~ 66 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQ---------------EDEGVPSTAIREISLLKEMQHGNIVRL 66 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhcc---------------ccccchHHHHHHHHHHHhccCCCEeeE
Confidence 46888899999999999999965 78999999873211 111234567889999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecC-CCCe
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDL-EWKP 786 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~-~~~~ 786 (947)
++++..+...++||||++ +++.+++........++.....++.|++.||+||| +.+++||||+|+||+++. ++.+
T Consensus 67 ~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dl~p~nill~~~~~~~ 142 (294)
T PLN00009 67 QDVVHSEKRLYLVFEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCH---SHRVLHRDLKPQNLLIDRRTNAL 142 (294)
T ss_pred EEEEecCCeEEEEEeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCcceEEEECCCCEE
Confidence 999999999999999995 58888887655555788888899999999999999 889999999999999985 5679
Q ss_pred EEeccccceecccCCCCcceecccccccccCccccccC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHh
Q 002250 787 RIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTC-KINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYS 865 (947)
Q Consensus 787 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~ 865 (947)
||+|||++........ ......+++.|+|||++.+. .++.++||||+|+++|||+||+.||..... ...+......
T Consensus 143 kl~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~-~~~~~~~~~~ 219 (294)
T PLN00009 143 KLADFGLARAFGIPVR--TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSE-IDELFKIFRI 219 (294)
T ss_pred EEcccccccccCCCcc--ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHH
Confidence 9999999975433211 11233578899999988664 478899999999999999999999853211 1111111100
Q ss_pred hcccccccc--------------ccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 866 KMDSRDSML--------------TVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 866 ~~~~~~~~~--------------~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
......... .................+.+++.+|++.+|++||++.++++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 220 LGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred hCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000000000 00000001111223455788999999999999999999986
No 328
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.4e-32 Score=303.13 Aligned_cols=269 Identities=22% Similarity=0.261 Sum_probs=195.3
Q ss_pred ccCCcccccccCceeEEEEEeC---CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccce
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN---SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVK 706 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 706 (947)
+|++.+.||+|+||.||+|... +++.||+|.+..... ........+.+|+.++++++||||++
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~--------------~~~~~~~~~~~e~~~l~~l~h~~i~~ 66 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKE--------------QYTGISQSACREIALLRELKHENVVS 66 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccc--------------cccCccHHHHHHHHHHHhcCCCCccc
Confidence 3677889999999999999965 478999999853221 11122356778999999999999999
Q ss_pred EEEEEecC--CccEEEEeccCCCChHHHhhhcC---CccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEec
Q 002250 707 LYCSITSE--DSNLLVYEYLPNGSLWDRLHTCH---KIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLD 781 (947)
Q Consensus 707 l~~~~~~~--~~~~lv~e~~~~gsL~~~l~~~~---~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~ 781 (947)
+++++... ...++||||+++ ++.+++.... ...++......++.|++.|++||| +.+|+||||||+||+++
T Consensus 67 ~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~h~dlkp~Nil~~ 142 (316)
T cd07842 67 LVEVFLEHADKSVYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLH---SNWVLHRDLKPANILVM 142 (316)
T ss_pred eEEEEeCCCCceEEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEEc
Confidence 99999988 778999999964 7777765332 236788999999999999999999 89999999999999999
Q ss_pred C----CCCeEEeccccceecccCCC-CcceecccccccccCccccccC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCC
Q 002250 782 L----EWKPRIADFGLAKIVQTGEA-GDLTHVIAGTHGYIAPEYAYTC-KINEKSDVYSFGVVLMELVTGKRPIVPEFGD 855 (947)
Q Consensus 782 ~----~~~~kl~DfG~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~ 855 (947)
. ++.+||+|||+++....... ........++..|+|||++.+. .++.++||||||+++|||++|+.||......
T Consensus 143 ~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~ 222 (316)
T cd07842 143 GEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAK 222 (316)
T ss_pred CCCCccceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCccc
Confidence 9 89999999999986543322 1122234678899999988764 4789999999999999999999999654322
Q ss_pred cc--------cHHHHHHhhcc----------ccccccc---cc-cCCCC-ccCH-------HHHHHHHHHHHhccCCCCC
Q 002250 856 SK--------DIVNWVYSKMD----------SRDSMLT---VV-DPNIS-EILK-------EDALKVLRIAIHCTNKLPA 905 (947)
Q Consensus 856 ~~--------~~~~~~~~~~~----------~~~~~~~---~~-d~~~~-~~~~-------~~~~~l~~l~~~cl~~dP~ 905 (947)
.. .+...+..... ....... .. ..... .... .....+.+++.+|++.||+
T Consensus 223 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~ 302 (316)
T cd07842 223 IKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPT 302 (316)
T ss_pred ccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcc
Confidence 10 00000000000 0000000 00 00000 0000 2334688999999999999
Q ss_pred CCCCHHHHHHH
Q 002250 906 FRPSMRVVVQM 916 (947)
Q Consensus 906 ~RPt~~ev~~~ 916 (947)
+|||+.|++++
T Consensus 303 ~Rps~~eil~~ 313 (316)
T cd07842 303 KRITAEEALEH 313 (316)
T ss_pred cCcCHHHHhcC
Confidence 99999999863
No 329
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=1.9e-32 Score=293.11 Aligned_cols=245 Identities=25% Similarity=0.355 Sum_probs=194.8
Q ss_pred ccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEEEEecCC
Q 002250 637 IGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYCSITSED 715 (947)
Q Consensus 637 iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 715 (947)
||.|++|.||+|+.. +++.||+|++..... ......+.+.+|+.++++++||||+++++++.++.
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--------------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 66 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHI--------------VETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKK 66 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcc--------------hhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCC
Confidence 699999999999965 589999999842210 11123467889999999999999999999999999
Q ss_pred ccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEeccccce
Q 002250 716 SNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFGLAK 795 (947)
Q Consensus 716 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 795 (947)
..++||||+++++|.+++.+. ..+++..+..++.|++.|++||| +.+++|+||+|+||+++.++.++|+|||.+.
T Consensus 67 ~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lH---~~~~~h~dl~~~nilv~~~~~~~l~df~~~~ 141 (262)
T cd05572 67 YIYMLMEYCLGGELWTILRDR--GLFDEYTARFYIACVVLAFEYLH---NRGIIYRDLKPENLLLDSNGYVKLVDFGFAK 141 (262)
T ss_pred ccEEEEecCCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEEcCCCCEEEeeCCccc
Confidence 999999999999999999864 34788899999999999999999 8999999999999999999999999999998
Q ss_pred ecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhccccccccc
Q 002250 796 IVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDSRDSMLT 875 (947)
Q Consensus 796 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 875 (947)
...... ......++..|+|||.+....++.++|+||+|+++|||++|+.||..... +..+..........
T Consensus 142 ~~~~~~---~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~---- 211 (262)
T cd05572 142 KLKSGQ---KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDE---DPMEIYNDILKGNG---- 211 (262)
T ss_pred ccCccc---ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCC---CHHHHHHHHhccCC----
Confidence 665432 12234678999999999888899999999999999999999999854322 12222222111111
Q ss_pred cccCCCCccCHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHH
Q 002250 876 VVDPNISEILKEDALKVLRIAIHCTNKLPAFRPS-----MRVVVQ 915 (947)
Q Consensus 876 ~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~ev~~ 915 (947)
....+......+.+++.+||+.+|++||+ +.|+++
T Consensus 212 -----~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 212 -----KLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred -----CCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 11122223567899999999999999999 566554
No 330
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=1.9e-32 Score=295.71 Aligned_cols=245 Identities=25% Similarity=0.288 Sum_probs=186.0
Q ss_pred cccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhh---ccccccceEEEEE
Q 002250 636 LIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSA---VRHVNVVKLYCSI 711 (947)
Q Consensus 636 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~---l~h~niv~l~~~~ 711 (947)
.||+|+||.||+|... +++.+|+|.+...... .......+.+|..+++. ..||||+.+++++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 66 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIK--------------MKQGETLALNERIMLSLVSTGDCPFIVCMTYAF 66 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccc--------------cchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEE
Confidence 4899999999999965 6899999988432110 01112233444444433 4799999999999
Q ss_pred ecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEecc
Q 002250 712 TSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADF 791 (947)
Q Consensus 712 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 791 (947)
..++..++||||+++++|.+++... ..+++.....++.|++.|++||| +.+|+||||||+||++++++.++++||
T Consensus 67 ~~~~~~~lv~e~~~~~~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dikp~Nil~~~~~~~~l~df 141 (279)
T cd05633 67 HTPDKLCFILDLMNGGDLHYHLSQH--GVFSEKEMRFYATEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDL 141 (279)
T ss_pred ecCCeEEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCcCCCCCCHHHEEECCCCCEEEccC
Confidence 9999999999999999999998764 35899999999999999999999 899999999999999999999999999
Q ss_pred ccceecccCCCCcceecccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcccc
Q 002250 792 GLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYT-CKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDSR 870 (947)
Q Consensus 792 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 870 (947)
|++....... .....||..|+|||.... ..++.++||||+||++|||++|..||......... ........
T Consensus 142 g~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~--~~~~~~~~-- 213 (279)
T cd05633 142 GLACDFSKKK----PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH--EIDRMTLT-- 213 (279)
T ss_pred CcceeccccC----ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHH--HHHHHhhc--
Confidence 9987543322 123468999999998864 45789999999999999999999999643221111 11010000
Q ss_pred ccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 002250 871 DSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRP-----SMRVVVQM 916 (947)
Q Consensus 871 ~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~ev~~~ 916 (947)
.. ...+......+.+++.+|++.||++|| +++|++++
T Consensus 214 ------~~---~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 214 ------VN---VELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred ------CC---cCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 01 112233455788899999999999999 59888875
No 331
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.3e-33 Score=325.36 Aligned_cols=259 Identities=26% Similarity=0.386 Sum_probs=208.2
Q ss_pred hccCCcccccccCceeEEEEEeC----C----CcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN----S----GKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV- 699 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~----~----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l- 699 (947)
++.++.+.+|+|.||.|++|... . ...||||.++... ...+.+.+..|++++..+
T Consensus 296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~----------------~~~~~~~~~~El~~m~~~g 359 (609)
T KOG0200|consen 296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENA----------------SSSEKKDLMSELNVLKELG 359 (609)
T ss_pred hhccccceeecccccceEeEEEeecccccccceEEEEEEeccccc----------------CcHHHHHHHHHHHHHHHhc
Confidence 33456669999999999999843 1 4579999984221 224567899999999999
Q ss_pred cccccceEEEEEecCCccEEEEeccCCCChHHHhhhcC------------C--ccCCHHHHHHHHHHHHHHHHHHhcCCC
Q 002250 700 RHVNVVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCH------------K--IEMDWVVRYAIAVGAAKGLEYLHHGFD 765 (947)
Q Consensus 700 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~------------~--~~~~~~~~~~i~~~ia~~l~yLH~~~~ 765 (947)
.|+||+.++|+|..++..++|+||++.|+|.++++..+ . ..+.....+.++.|||.||+||+ +
T Consensus 360 ~H~niv~llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~---~ 436 (609)
T KOG0200|consen 360 KHPNIVNLLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLA---S 436 (609)
T ss_pred CCcchhhheeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHh---h
Confidence 59999999999999999999999999999999998754 0 13788899999999999999999 8
Q ss_pred CCeEeccCCCCCeEecCCCCeEEeccccceecccCCCCcceecc-cccccccCccccccCCCCCccchHHHHHHHHHHHh
Q 002250 766 RPVIHRDVKSSNILLDLEWKPRIADFGLAKIVQTGEAGDLTHVI-AGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT 844 (947)
Q Consensus 766 ~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt 844 (947)
.++|||||.++|||+.++..+||+|||+|+.............. .-...|||||.+....|+.++|||||||++|||+|
T Consensus 437 ~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~Eifs 516 (609)
T KOG0200|consen 437 VPCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFT 516 (609)
T ss_pred CCccchhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhh
Confidence 99999999999999999999999999999976655443322111 12457999999999999999999999999999999
Q ss_pred -CCCCCCCCCCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 002250 845 -GKRPIVPEFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEA 920 (947)
Q Consensus 845 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 920 (947)
|..||.. .....++.+++. ++...+.+..+..+++++|+.||+.+|++||++.|+++.++..
T Consensus 517 LG~~PYp~-~~~~~~l~~~l~-------------~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 517 LGGTPYPG-IPPTEELLEFLK-------------EGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred CCCCCCCC-CCcHHHHHHHHh-------------cCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 8889843 111233333222 1222344556677899999999999999999999999999884
No 332
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=2.4e-32 Score=296.49 Aligned_cols=256 Identities=28% Similarity=0.386 Sum_probs=203.9
Q ss_pred HHhhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcccccc
Q 002250 626 EIIDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNV 704 (947)
Q Consensus 626 ~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 704 (947)
+..+.|+..+.||+|++|.||+|..+ +++.||+|++... ....+.+.+|++++++++|+|+
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~------------------~~~~~~~~~e~~~l~~l~~~~i 77 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLR------------------KQNKELIINEILIMKDCKHPNI 77 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecC------------------chhHHHHHHHHHHHHHCCCCCe
Confidence 34567888899999999999999976 7899999988311 0135678899999999999999
Q ss_pred ceEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCC
Q 002250 705 VKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEW 784 (947)
Q Consensus 705 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~ 784 (947)
+++++++..+...++|+||+++++|.+++.... ..+++..+..++.|++.||+||| +.+++|+||+|+||+++.++
T Consensus 78 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH---~~gi~H~dl~p~ni~i~~~~ 153 (286)
T cd06614 78 VDYYDSYLVGDELWVVMEYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLH---SQNVIHRDIKSDNILLSKDG 153 (286)
T ss_pred eEEEEEEEECCEEEEEEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCChhhEEEcCCC
Confidence 999999999999999999999999999998743 46899999999999999999999 89999999999999999999
Q ss_pred CeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 002250 785 KPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVY 864 (947)
Q Consensus 785 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~ 864 (947)
.++|+|||.+........ ......++..|+|||++.+..++.++|||||||++|||++|+.||... +......
T Consensus 154 ~~~l~d~~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~-----~~~~~~~ 226 (286)
T cd06614 154 SVKLADFGFAAQLTKEKS--KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLRE-----PPLRALF 226 (286)
T ss_pred CEEECccchhhhhccchh--hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCC-----CHHHHHH
Confidence 999999999865543221 112335788999999998888999999999999999999999998422 1111111
Q ss_pred hhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 002250 865 SKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLE 918 (947)
Q Consensus 865 ~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~ 918 (947)
....... . .. ......+..+.+++.+|++.+|.+||++.+++++--
T Consensus 227 ~~~~~~~--~-----~~-~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~ 272 (286)
T cd06614 227 LITTKGI--P-----PL-KNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPF 272 (286)
T ss_pred HHHhcCC--C-----CC-cchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChH
Confidence 1111100 0 00 011123456889999999999999999999986443
No 333
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=2.1e-32 Score=298.42 Aligned_cols=266 Identities=21% Similarity=0.222 Sum_probs=194.3
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcc-ccccce
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVR-HVNVVK 706 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~ 706 (947)
++|+..+.||+|+||.||+|... +++.||||++.... ........+.+|+.+++++. ||||++
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~---------------~~~~~~~~~~~E~~~l~~l~~~~~i~~ 65 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEM---------------DEEGIPPTALREISLLQMLSESIYIVR 65 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhc---------------cccCCchHHHHHHHHHHHccCCCCccc
Confidence 36888899999999999999965 68999999873211 11123456788999999995 699999
Q ss_pred EEEEEecCCc-----cEEEEeccCCCChHHHhhhcC---CccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCe
Q 002250 707 LYCSITSEDS-----NLLVYEYLPNGSLWDRLHTCH---KIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNI 778 (947)
Q Consensus 707 l~~~~~~~~~-----~~lv~e~~~~gsL~~~l~~~~---~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NI 778 (947)
+++++...+. .|+||||+++ +|.+++.... ...+++.....++.||+.||+||| +.+|+||||+|+||
T Consensus 66 ~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~~~ni 141 (295)
T cd07837 66 LLDVEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCH---KHGVMHRDLKPQNL 141 (295)
T ss_pred eeeeEeecCCCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHE
Confidence 9999887665 7999999975 8988886542 246799999999999999999999 89999999999999
Q ss_pred EecC-CCCeEEeccccceecccCCCCcceecccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCc
Q 002250 779 LLDL-EWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYT-CKINEKSDVYSFGVVLMELVTGKRPIVPEFGDS 856 (947)
Q Consensus 779 ll~~-~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~ 856 (947)
+++. ++.+||+|||++........ ......+++.|+|||++.+ ..++.++||||||+++|||++|..||..... .
T Consensus 142 l~~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~-~ 218 (295)
T cd07837 142 LVDKQKGLLKIADLGLGRAFSIPVK--SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSE-L 218 (295)
T ss_pred EEecCCCeEEEeecccceecCCCcc--ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCH-H
Confidence 9998 89999999999875533211 1112356889999998865 4578999999999999999999999853211 1
Q ss_pred ccHHHHHHhhccccc-cccccc------------cCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 857 KDIVNWVYSKMDSRD-SMLTVV------------DPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 857 ~~~~~~~~~~~~~~~-~~~~~~------------d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
............... ...... ...+..........+.+++.+|++.||.+||++.|++.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 219 QQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred HHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 111111100000000 000000 000011112345668899999999999999999999863
No 334
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=3.4e-32 Score=291.68 Aligned_cols=244 Identities=22% Similarity=0.312 Sum_probs=189.7
Q ss_pred HhhccCCcccc--cccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-ccc
Q 002250 627 IIDAVKPENLI--GKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-RHV 702 (947)
Q Consensus 627 ~~~~~~~~~~i--G~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~ 702 (947)
..+.|++.+.+ |+|+||.||++..+ +++.+|+|.+.+.. ... .|+.....+ +||
T Consensus 12 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~--------------------~~~--~e~~~~~~~~~h~ 69 (267)
T PHA03390 12 FLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKN--------------------FNA--IEPMVHQLMKDNP 69 (267)
T ss_pred HHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhh--------------------cch--hhHHHHHHhhcCC
Confidence 34667776666 99999999999954 68889999873211 001 122222222 799
Q ss_pred ccceEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecC
Q 002250 703 NVVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDL 782 (947)
Q Consensus 703 niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~ 782 (947)
||+++++++..++..++||||+++++|.+++.... .+++.....++.|+++|++||| +.+++||||||+||+++.
T Consensus 70 ~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~ 144 (267)
T PHA03390 70 NFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKEG--KLSEAEVKKIIRQLVEALNDLH---KHNIIHNDIKLENVLYDR 144 (267)
T ss_pred CEEEEEEEEecCCeeEEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEeC
Confidence 99999999999999999999999999999998743 7899999999999999999999 889999999999999999
Q ss_pred CC-CeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHH
Q 002250 783 EW-KPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVN 861 (947)
Q Consensus 783 ~~-~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~ 861 (947)
++ .++|+|||++....... ...++..|+|||++.+..++.++||||+|+++|||++|+.||........+...
T Consensus 145 ~~~~~~l~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~ 218 (267)
T PHA03390 145 AKDRIYLCDYGLCKIIGTPS------CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLES 218 (267)
T ss_pred CCCeEEEecCccceecCCCc------cCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHH
Confidence 98 99999999987654322 235789999999999888999999999999999999999999643322222222
Q ss_pred HHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCC-HHHHHH
Q 002250 862 WVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPS-MRVVVQ 915 (947)
Q Consensus 862 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-~~ev~~ 915 (947)
+.... .. ...........+.+++.+|++.+|.+||+ +.|+++
T Consensus 219 ~~~~~-~~-----------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 219 LLKRQ-QK-----------KLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred HHHhh-cc-----------cCCcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 22111 11 01122245567888999999999999996 588874
No 335
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=2.2e-32 Score=300.20 Aligned_cols=265 Identities=25% Similarity=0.288 Sum_probs=195.2
Q ss_pred hhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccce
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVK 706 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 706 (947)
.++|++.+.||+|+||.||+|... +|+.||+|++.... ........+.+|+.++++++|+||++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~---------------~~~~~~~~~~~E~~~l~~l~h~~i~~ 70 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDN---------------ERDGIPISSLREITLLLNLRHPNIVE 70 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEecc---------------CCCCCcchhhHHHHHHHhCCCCCCcc
Confidence 467899999999999999999965 68999999884221 11122234567999999999999999
Q ss_pred EEEEEecC--CccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCC
Q 002250 707 LYCSITSE--DSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEW 784 (947)
Q Consensus 707 l~~~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~ 784 (947)
+++++... +..++||||++ ++|.+++... ...+++..+..++.|++.|++||| +.+++||||||+||+++.++
T Consensus 71 ~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~ 145 (309)
T cd07845 71 LKEVVVGKHLDSIFLVMEYCE-QDLASLLDNM-PTPFSESQVKCLMLQLLRGLQYLH---ENFIIHRDLKVSNLLLTDKG 145 (309)
T ss_pred eEEEEecCCCCeEEEEEecCC-CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCC
Confidence 99998765 45799999996 5888888763 356899999999999999999999 89999999999999999999
Q ss_pred CeEEeccccceecccCCCCcceecccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHH
Q 002250 785 KPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYT-CKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWV 863 (947)
Q Consensus 785 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~ 863 (947)
.+||+|||.+......... .....++..|+|||.+.+ ..++.++||||+|+++|||++|+.||.... .......+
T Consensus 146 ~~kL~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~--~~~~~~~~ 221 (309)
T cd07845 146 CLKIADFGLARTYGLPAKP--MTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKS--EIEQLDLI 221 (309)
T ss_pred CEEECccceeeecCCccCC--CCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHH
Confidence 9999999999876543211 112245788999999865 457899999999999999999999985321 11111111
Q ss_pred Hhhccc-ccccc---------cc--cc-CC---CCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 864 YSKMDS-RDSML---------TV--VD-PN---ISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 864 ~~~~~~-~~~~~---------~~--~d-~~---~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
...... ..... .. .. .. +..........+.+++.+|++.||++|||+.|++++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 222 IQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred HHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 110000 00000 00 00 00 000011134567889999999999999999999964
No 336
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=2e-32 Score=297.78 Aligned_cols=270 Identities=17% Similarity=0.190 Sum_probs=186.5
Q ss_pred hccCCcccccccCceeEEEEEeCC----CcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcccccc
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLNS----GKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNV 704 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 704 (947)
++|++.+.||+|+||+||+|...+ +..+|+|+...... .. ..+..............+...+..+.|+++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~----~~--~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i 85 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENE----TI--VMETLVYNNIYDIDKIALWKNIHNIDHLGI 85 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCC----ch--hhHHHHHHhhhhHHHHHHHHHhccCCCCCC
Confidence 579999999999999999999664 45667765421110 00 000000011111223345556667799999
Q ss_pred ceEEEEEecCC----ccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEe
Q 002250 705 VKLYCSITSED----SNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILL 780 (947)
Q Consensus 705 v~l~~~~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll 780 (947)
+++++++.... ..++++|++. .++.+.+... ...++.....++.|++.||+||| +.+|+||||||+|||+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH---~~~iiHrDiKp~Nill 159 (294)
T PHA02882 86 PKYYGCGSFKRCRMYYRFILLEKLV-ENTKEIFKRI--KCKNKKLIKNIMKDMLTTLEYIH---EHGISHGDIKPENIMV 159 (294)
T ss_pred CcEEEeeeEecCCceEEEEEEehhc-cCHHHHHHhh--ccCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEE
Confidence 99998766543 2367888773 4666666542 23567788899999999999999 8999999999999999
Q ss_pred cCCCCeEEeccccceecccCCCC-----cceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCC
Q 002250 781 DLEWKPRIADFGLAKIVQTGEAG-----DLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGD 855 (947)
Q Consensus 781 ~~~~~~kl~DfG~a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~ 855 (947)
+.++.++|+|||+|+........ .......||+.|+|||+..+..++.++|||||||++|||++|+.||......
T Consensus 160 ~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~ 239 (294)
T PHA02882 160 DGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHN 239 (294)
T ss_pred cCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccc
Confidence 99999999999999866432211 1122346999999999999999999999999999999999999999643211
Q ss_pred cccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 002250 856 SKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLE 918 (947)
Q Consensus 856 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~ 918 (947)
........... ...+..+.. .....+..+.+++..|++.+|++||++.++++.++
T Consensus 240 -~~~~~~~~~~~-----~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 240 -GNLIHAAKCDF-----IKRLHEGKI--KIKNANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred -hHHHHHhHHHH-----HHHhhhhhh--ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 11111110000 000000111 01123566889999999999999999999998763
No 337
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=7.7e-33 Score=295.49 Aligned_cols=250 Identities=26% Similarity=0.291 Sum_probs=200.4
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
+|++.+.||.|+||.||+|... +++.||+|++.... .........+.+|++++++++||||++++
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~--------------~~~~~~~~~~~~e~~~l~~l~h~~i~~~~ 66 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQK--------------CVEKGSVRNVLNERRILQELNHPFLVNLW 66 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhh--------------hcchhHHHHHHHHHHHHHhCCCCChHHHH
Confidence 4778899999999999999966 68999999983211 11113456788999999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRI 788 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 788 (947)
+.+..+...++|+||+++++|.+++... .++++.....++.|+++|++||| +.+++|+||+|+||++++++.++|
T Consensus 67 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~l 141 (258)
T cd05578 67 YSFQDEENMYLVVDLLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLH---SKGIIHRDIKPDNILLDEQGHVHI 141 (258)
T ss_pred HhhcCCCeEEEEEeCCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEEcCCCCEEE
Confidence 9999999999999999999999999864 46889999999999999999999 889999999999999999999999
Q ss_pred eccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcc
Q 002250 789 ADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMD 868 (947)
Q Consensus 789 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 868 (947)
+|||.+........ .....|+..|+|||++....++.++|+||+|+++|+|++|..||...... ..........
T Consensus 142 ~d~~~~~~~~~~~~---~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~~~~~~~ 215 (258)
T cd05578 142 TDFNIATKVTPDTL---TTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT---IRDQIRAKQE 215 (258)
T ss_pred eecccccccCCCcc---ccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc---HHHHHHHHhc
Confidence 99999876544321 22345788999999998888999999999999999999999998543221 1111111111
Q ss_pred ccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCH--HHHH
Q 002250 869 SRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSM--RVVV 914 (947)
Q Consensus 869 ~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~--~ev~ 914 (947)
. .....+...+..+.+++.+||+.||.+||++ +|+.
T Consensus 216 ~----------~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 216 T----------ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred c----------ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 1 1112223344678899999999999999999 5544
No 338
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=3.3e-32 Score=301.14 Aligned_cols=262 Identities=22% Similarity=0.278 Sum_probs=191.7
Q ss_pred cccccc--CceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEEEE
Q 002250 635 NLIGKG--GSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYCSI 711 (947)
Q Consensus 635 ~~iG~G--~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 711 (947)
..||+| +||+||+|+.. +|+.||||++..... .....+.+.+|+.+++.++||||++++++|
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~---------------~~~~~~~~~~e~~~~~~l~h~niv~~~~~~ 68 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENC---------------TEEHLKALQNEVVLSHFFRHPNIMTSWTVF 68 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccC---------------CHHHHHHHHHHHHHHHhCCCCCcceEeeeE
Confidence 356666 99999999964 799999999842110 112346788999999999999999999999
Q ss_pred ecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEecc
Q 002250 712 TSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADF 791 (947)
Q Consensus 712 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 791 (947)
..++..++||||++++++.+++.......+++..+..++.|++.||+||| +.+++||||||+||+++.++.++++||
T Consensus 69 ~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivHrDlkp~Nill~~~~~~~~~~~ 145 (328)
T cd08226 69 TTGSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLH---QNGYIHRNIKASHILISGDGLVSLSGL 145 (328)
T ss_pred ecCCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEeCCCcEEEech
Confidence 99999999999999999999998765556899999999999999999999 899999999999999999999999999
Q ss_pred ccceecccCCCC-----cceecccccccccCccccccC--CCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 002250 792 GLAKIVQTGEAG-----DLTHVIAGTHGYIAPEYAYTC--KINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVY 864 (947)
Q Consensus 792 G~a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~ 864 (947)
+.+......... .......++..|+|||++.+. .++.++|||||||++|||++|+.||...... ........
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~-~~~~~~~~ 224 (328)
T cd08226 146 SHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRT-QMLLQKLK 224 (328)
T ss_pred HHHhhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChH-HHHHHHhc
Confidence 865432221110 001112345679999998764 4788999999999999999999998543211 11111000
Q ss_pred hhcc-----------------cc---------cccc-----ccccCCC-CccCHHHHHHHHHHHHhccCCCCCCCCCHHH
Q 002250 865 SKMD-----------------SR---------DSML-----TVVDPNI-SEILKEDALKVLRIAIHCTNKLPAFRPSMRV 912 (947)
Q Consensus 865 ~~~~-----------------~~---------~~~~-----~~~d~~~-~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~e 912 (947)
.... .. .... .+.+..+ ..........+.+++.+|++.||++|||+.|
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e 304 (328)
T cd08226 225 GPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASS 304 (328)
T ss_pred CCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHH
Confidence 0000 00 0000 0000111 1122345567899999999999999999999
Q ss_pred HHH
Q 002250 913 VVQ 915 (947)
Q Consensus 913 v~~ 915 (947)
+++
T Consensus 305 ~l~ 307 (328)
T cd08226 305 LLS 307 (328)
T ss_pred Hhh
Confidence 985
No 339
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=1.8e-32 Score=297.00 Aligned_cols=262 Identities=22% Similarity=0.290 Sum_probs=195.6
Q ss_pred cCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcc-ccccceEE
Q 002250 631 VKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVR-HVNVVKLY 708 (947)
Q Consensus 631 ~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~ 708 (947)
|++.+.||+|++|+||+|... +++.||||++.... .........+|+..+++++ ||||++++
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~----------------~~~~~~~~~~e~~~l~~~~~h~~i~~~~ 64 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKF----------------YSWEECMNLREVKSLRKLNEHPNIVKLK 64 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhc----------------cchhHHHHHHHHHHHHhccCCCCchhHH
Confidence 567789999999999999976 58899999873211 1112233457999999998 99999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRI 788 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 788 (947)
+++..++..++||||+ +|+|.+++.......+++..+..++.|++.+|+||| +.+++|+||+|+||++++++.++|
T Consensus 65 ~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~dl~~~ni~i~~~~~~~l 140 (283)
T cd07830 65 EVFRENDELYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIH---KHGFFHRDLKPENLLVSGPEVVKI 140 (283)
T ss_pred HHhhcCCcEEEEEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCCEEE
Confidence 9999999999999999 889999998755457899999999999999999999 899999999999999999999999
Q ss_pred eccccceecccCCCCcceecccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHH------
Q 002250 789 ADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYT-CKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVN------ 861 (947)
Q Consensus 789 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~------ 861 (947)
+|||.+......... ....++..|+|||++.. ..++.++|+||||+++|||++|+.||..... ......
T Consensus 141 ~d~~~~~~~~~~~~~---~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~-~~~~~~~~~~~~ 216 (283)
T cd07830 141 ADFGLAREIRSRPPY---TDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSE-IDQLYKICSVLG 216 (283)
T ss_pred eecccceeccCCCCc---CCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCCh-HHHHHHHHHhcC
Confidence 999999865443221 22357889999998754 4578999999999999999999999843311 000000
Q ss_pred ------HHHhhc---cccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 862 ------WVYSKM---DSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 862 ------~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
|..... .............+.+........+.+++.+|++.+|++|||+.|++.+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 217 TPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred CCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 000000 0000000000011111111224678899999999999999999999864
No 340
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=7e-33 Score=307.64 Aligned_cols=269 Identities=21% Similarity=0.321 Sum_probs=197.2
Q ss_pred hhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccce
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVK 706 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 706 (947)
.++|++.+.||+|+||.||+|... +|+.||||++.+.. .......+.+|+.++++++||||++
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~----------------~~~~~~~~~~E~~~l~~l~h~niv~ 67 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE----------------HQTFCQRTLREIKILRRFKHENIIG 67 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc----------------cchhHHHHHHHHHHHHhCCCCCcCc
Confidence 468999999999999999999854 78999999883211 1123456778999999999999999
Q ss_pred EEEEEecCC-----ccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEec
Q 002250 707 LYCSITSED-----SNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLD 781 (947)
Q Consensus 707 l~~~~~~~~-----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~ 781 (947)
+++++.... ..++|+||++ +++.+++.. ..+++.....++.|++.||+||| +.+|+||||||+||+++
T Consensus 68 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~---~~l~~~~~~~i~~ql~~aL~~LH---~~~ivH~dlkp~Nill~ 140 (336)
T cd07849 68 ILDIIRPPSFESFNDVYIVQELME-TDLYKLIKT---QHLSNDHIQYFLYQILRGLKYIH---SANVLHRDLKPSNLLLN 140 (336)
T ss_pred hhheeecccccccceEEEEehhcc-cCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEC
Confidence 998876543 4689999996 588877764 45899999999999999999999 89999999999999999
Q ss_pred CCCCeEEeccccceecccCCCCc-ceecccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccH
Q 002250 782 LEWKPRIADFGLAKIVQTGEAGD-LTHVIAGTHGYIAPEYAYT-CKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDI 859 (947)
Q Consensus 782 ~~~~~kl~DfG~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~ 859 (947)
.++.++|+|||++.......... ......||..|+|||.+.+ ..++.++||||+||++|||++|+.||.... ....
T Consensus 141 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~--~~~~ 218 (336)
T cd07849 141 TNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKD--YLHQ 218 (336)
T ss_pred CCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--HHHH
Confidence 99999999999997654332211 1123468899999998754 458899999999999999999999984321 1111
Q ss_pred HHHHHhhcccc--cccccccc-------------CCC--CccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH--hhcc
Q 002250 860 VNWVYSKMDSR--DSMLTVVD-------------PNI--SEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM--LEEA 920 (947)
Q Consensus 860 ~~~~~~~~~~~--~~~~~~~d-------------~~~--~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~--L~~~ 920 (947)
........... .....+.+ +.. ..........+.+++.+|++.+|++|||+.|++++ ++..
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~ 298 (336)
T cd07849 219 LNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQY 298 (336)
T ss_pred HHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCcccccc
Confidence 11110000000 00000000 000 01112234568899999999999999999999987 5544
Q ss_pred C
Q 002250 921 E 921 (947)
Q Consensus 921 ~ 921 (947)
.
T Consensus 299 ~ 299 (336)
T cd07849 299 H 299 (336)
T ss_pred C
Confidence 3
No 341
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=2.1e-32 Score=290.79 Aligned_cols=249 Identities=29% Similarity=0.415 Sum_probs=200.9
Q ss_pred cCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEE
Q 002250 631 VKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYC 709 (947)
Q Consensus 631 ~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 709 (947)
|...+.||+|++|.||+|... +++.+++|++.... ......+.+|++++++++|+|++++++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-----------------~~~~~~~~~e~~~l~~l~~~~i~~~~~ 64 (253)
T cd05122 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLES-----------------KEKKEKIINEIQILKKCKHPNIVKYYG 64 (253)
T ss_pred ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccc-----------------hhHHHHHHHHHHHHHhCCCCCEeEEEE
Confidence 677889999999999999976 78999999984211 124567889999999999999999999
Q ss_pred EEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEe
Q 002250 710 SITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIA 789 (947)
Q Consensus 710 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 789 (947)
++..+...++++||+++++|.+++.... ..+++..+..++.|++.|++||| ..+++||||+|+||++++++.++|+
T Consensus 65 ~~~~~~~~~l~~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~ 140 (253)
T cd05122 65 SYLKKDELWIVMEFCSGGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLH---SNGIIHRDIKAANILLTSDGEVKLI 140 (253)
T ss_pred EEecCCeEEEEEecCCCCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhh---cCCEecCCCCHHHEEEccCCeEEEe
Confidence 9999999999999999999999998742 46899999999999999999999 8999999999999999999999999
Q ss_pred ccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhccc
Q 002250 790 DFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDS 869 (947)
Q Consensus 790 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 869 (947)
|||.+........ .....++..|+|||++....++.++||||||+++|||++|+.||.... ..+.......
T Consensus 141 d~~~~~~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~- 211 (253)
T cd05122 141 DFGLSAQLSDTKA---RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELP-----PMKALFKIAT- 211 (253)
T ss_pred ecccccccccccc---ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCc-----hHHHHHHHHh-
Confidence 9999976654432 224468899999999988889999999999999999999999984321 1111111111
Q ss_pred cccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 870 RDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 870 ~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
.... ... ........+.+++.+|++.||++|||+.|++++
T Consensus 212 -~~~~-----~~~-~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 212 -NGPP-----GLR-NPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred -cCCC-----CcC-cccccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0000 000 011124568899999999999999999999864
No 342
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=1.5e-32 Score=293.18 Aligned_cols=252 Identities=28% Similarity=0.395 Sum_probs=203.8
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
+|++.+.||+|+||.||+|... +++.||+|++.... ........+.+|+++++.++|||++++.
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~---------------~~~~~~~~~~~e~~~l~~l~~~~~~~~~ 65 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSN---------------MSEKEREDALNEVKILKKLNHPNIIKYY 65 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeeccc---------------CChHHHHHHHHHHHHHHhcCCCChhheE
Confidence 4777889999999999999965 68999999983211 1123456688999999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcC--CccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCe
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCH--KIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKP 786 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~--~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 786 (947)
+.+..++..++|+||+++++|.+++.... ...+++.....++.+++.|++||| +.+++|+||+|+||++++++.+
T Consensus 66 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh---~~~~~H~dl~~~nil~~~~~~~ 142 (258)
T cd08215 66 ESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLH---SRKILHRDIKPQNIFLTSNGLV 142 (258)
T ss_pred EEEecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHHeEEcCCCcE
Confidence 99999999999999999999999998743 467899999999999999999999 8899999999999999999999
Q ss_pred EEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 002250 787 RIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSK 866 (947)
Q Consensus 787 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 866 (947)
+|+|||.+........ ......|++.|+|||......++.++|+||+|+++|+|++|+.||... +..+.....
T Consensus 143 ~l~d~~~~~~~~~~~~--~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~-----~~~~~~~~~ 215 (258)
T cd08215 143 KLGDFGISKVLSSTVD--LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGE-----NLLELALKI 215 (258)
T ss_pred EECCccceeecccCcc--eecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCC-----cHHHHHHHH
Confidence 9999999986654431 222346889999999998888999999999999999999999998432 122222111
Q ss_pred ccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 867 MDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 867 ~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
... .....+......+.+++.+|+..+|++|||+.|++++
T Consensus 216 ~~~----------~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 216 LKG----------QYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred hcC----------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 111 1111222344668899999999999999999999864
No 343
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=2.6e-33 Score=277.30 Aligned_cols=207 Identities=27% Similarity=0.365 Sum_probs=170.4
Q ss_pred HHhhccCCcccccccCceeEEEEEeC---C--CcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcc
Q 002250 626 EIIDAVKPENLIGKGGSGNVYKVVLN---S--GKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVR 700 (947)
Q Consensus 626 ~~~~~~~~~~~iG~G~~g~Vy~~~~~---~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 700 (947)
+....|+....||+|.||.||+|.-+ + .+.+|||++.... +...-.....+|+..++.++
T Consensus 21 e~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~k---------------d~tGiS~SAcREiaL~REl~ 85 (438)
T KOG0666|consen 21 EDLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEK---------------DGTGISMSACREIALLRELK 85 (438)
T ss_pred HHHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccC---------------CCCCcCHHHHHHHHHHHHhc
Confidence 44578999999999999999999633 2 2378999984221 12233456779999999999
Q ss_pred ccccceEEEEEec-CCccEEEEeccCCCChHHHhhhc---CCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCC
Q 002250 701 HVNVVKLYCSITS-EDSNLLVYEYLPNGSLWDRLHTC---HKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSS 776 (947)
Q Consensus 701 h~niv~l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~---~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~ 776 (947)
|||++.+..++.. +..+++++||.+. +|++.++-. ....++...+..|..||+.|++||| ++=|+||||||.
T Consensus 86 h~nvi~Lv~Vfl~~d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH---~NWvlHRDLKPa 161 (438)
T KOG0666|consen 86 HPNVISLVKVFLSHDKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLH---SNWVLHRDLKPA 161 (438)
T ss_pred CCcchhHHHHHhccCceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHh---hhheeeccCCcc
Confidence 9999999998877 7888999999965 888888643 2356888899999999999999999 788999999999
Q ss_pred CeEecCC----CCeEEeccccceecccCCC-CcceecccccccccCccccccCC-CCCccchHHHHHHHHHHHhCCCCCC
Q 002250 777 NILLDLE----WKPRIADFGLAKIVQTGEA-GDLTHVIAGTHGYIAPEYAYTCK-INEKSDVYSFGVVLMELVTGKRPIV 850 (947)
Q Consensus 777 NIll~~~----~~~kl~DfG~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slGv~l~elltg~~p~~ 850 (947)
|||+..+ |.|||+|||+|+.+...-. ....+.++-|.+|.|||.+.+.+ |+.+.||||.||++.||+|-++-|.
T Consensus 162 NIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~ 241 (438)
T KOG0666|consen 162 NILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFK 241 (438)
T ss_pred eEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCcccc
Confidence 9999887 8999999999998765432 22334567799999999998875 8899999999999999999887775
Q ss_pred C
Q 002250 851 P 851 (947)
Q Consensus 851 ~ 851 (947)
.
T Consensus 242 g 242 (438)
T KOG0666|consen 242 G 242 (438)
T ss_pred c
Confidence 4
No 344
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=4.3e-32 Score=298.75 Aligned_cols=263 Identities=21% Similarity=0.222 Sum_probs=190.1
Q ss_pred cccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEEEEec
Q 002250 634 ENLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYCSITS 713 (947)
Q Consensus 634 ~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 713 (947)
.+.+|.|+++.||++.. +++.||||++.... ........+.+|++++++++||||+++++++..
T Consensus 7 ~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~---------------~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~ 70 (314)
T cd08216 7 GKCFEDLMIVHLAKHKP-TNTLVAVKKINLDS---------------CSKEDLKLLQQEIITSRQLQHPNILPYVTSFIV 70 (314)
T ss_pred hHhhcCCceEEEEEecC-CCCEEEEEEEeccc---------------cchhHHHHHHHHHHHHHhcCCcchhhhhheeec
Confidence 34444555555555444 68999999984211 112345678999999999999999999999999
Q ss_pred CCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEecccc
Q 002250 714 EDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFGL 793 (947)
Q Consensus 714 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 793 (947)
++..+++|||+++|+|.+++.......+++.....++.|++.||+||| +.+|+||||||+||+++.++.++++|||.
T Consensus 71 ~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH---~~~ivH~dlk~~Nili~~~~~~kl~d~~~ 147 (314)
T cd08216 71 DSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIH---SKGFIHRSVKASHILLSGDGKVVLSGLRY 147 (314)
T ss_pred CCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCcceEEEecCCceEEecCcc
Confidence 999999999999999999998755556888899999999999999999 89999999999999999999999999998
Q ss_pred ceecccCCC-----CcceecccccccccCccccccC--CCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 002250 794 AKIVQTGEA-----GDLTHVIAGTHGYIAPEYAYTC--KINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSK 866 (947)
Q Consensus 794 a~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 866 (947)
+........ ........++..|+|||++... .++.++|||||||++|||++|+.||...... ....+.....
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~-~~~~~~~~~~ 226 (314)
T cd08216 148 SVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPAT-QMLLEKVRGT 226 (314)
T ss_pred ceeeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhcc
Confidence 865432211 1112234577889999998653 4788999999999999999999999542111 1111111000
Q ss_pred cc----c------cccccc----cccCCC-----CccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 867 MD----S------RDSMLT----VVDPNI-----SEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 867 ~~----~------~~~~~~----~~d~~~-----~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
.. . ...+.. ..++.. ..........+.+++.+||+.||++|||+.+++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 227 VPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred CccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 00 0 000000 000000 11122334578899999999999999999999863
No 345
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=1.2e-32 Score=293.61 Aligned_cols=250 Identities=24% Similarity=0.330 Sum_probs=202.6
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
+|++.+.||+|+||.||+++.. +++.+|+|.+.... ........+.+|++++++++|+||+++.
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~---------------~~~~~~~~~~~e~~~l~~l~~~~i~~~~ 65 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGS---------------MSQKEREDAVNEIRILASVNHPNIISYK 65 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhh---------------ccHHHHHHHHHHHHHHHhCCCCCchhhh
Confidence 4678889999999999999855 78899999883211 1112345677899999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhc--CCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCe
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTC--HKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKP 786 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 786 (947)
+++......++||||+++++|.+++... ....+++..++.++.|++.|++||| +.+++||||+|+||++++++.+
T Consensus 66 ~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh---~~~i~h~~l~~~ni~~~~~~~~ 142 (256)
T cd08530 66 EAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALH---EQKILHRDLKSANILLVANDLV 142 (256)
T ss_pred hhhccCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEEecCCcE
Confidence 9999999999999999999999998763 2356899999999999999999999 8999999999999999999999
Q ss_pred EEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 002250 787 RIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSK 866 (947)
Q Consensus 787 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 866 (947)
|++|||++....... .....++..|+|||...+..++.++|+||+|+++|||++|+.||... +..+.....
T Consensus 143 kl~d~g~~~~~~~~~----~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~-----~~~~~~~~~ 213 (256)
T cd08530 143 KIGDLGISKVLKKNM----AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEAR-----SMQDLRYKV 213 (256)
T ss_pred EEeeccchhhhccCC----cccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHH
Confidence 999999998765441 12345789999999999888999999999999999999999998432 111111111
Q ss_pred ccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 867 MDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 867 ~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
. ....+.........+.+++.+|++.+|++||++.++++.
T Consensus 214 ~----------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 214 Q----------RGKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred h----------cCCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 1 111222333556678999999999999999999999864
No 346
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=2.1e-32 Score=305.92 Aligned_cols=265 Identities=22% Similarity=0.260 Sum_probs=196.3
Q ss_pred HHhhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcccccc
Q 002250 626 EIIDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNV 704 (947)
Q Consensus 626 ~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 704 (947)
.+.++|+..+.||+|+||.||+|... +++.||||++.... ........+.+|+.++++++||||
T Consensus 13 ~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~---------------~~~~~~~~~~~E~~~l~~l~h~~i 77 (353)
T cd07850 13 TVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPF---------------QNVTHAKRAYRELVLMKLVNHKNI 77 (353)
T ss_pred hhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccc---------------cChhHHHHHHHHHHHHHhcCCCCC
Confidence 35688999999999999999999955 78999999873110 111223456789999999999999
Q ss_pred ceEEEEEecCC------ccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCe
Q 002250 705 VKLYCSITSED------SNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNI 778 (947)
Q Consensus 705 v~l~~~~~~~~------~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NI 778 (947)
+++++++.... ..|+||||++ ++|.+.+... ++......++.|++.||+||| +.+|+||||||+||
T Consensus 78 v~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~----l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Ni 149 (353)
T cd07850 78 IGLLNVFTPQKSLEEFQDVYLVMELMD-ANLCQVIQMD----LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNI 149 (353)
T ss_pred cceeeeeccCCCccccCcEEEEEeccC-CCHHHHHhhc----CCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHE
Confidence 99999986543 4689999995 5888887652 788888999999999999999 89999999999999
Q ss_pred EecCCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCC---
Q 002250 779 LLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGD--- 855 (947)
Q Consensus 779 ll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~--- 855 (947)
+++.++.+||+|||+++....... .....++..|+|||++.+..++.++|||||||++|+|++|+.||......
T Consensus 150 l~~~~~~~kL~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~ 226 (353)
T cd07850 150 VVKSDCTLKILDFGLARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQW 226 (353)
T ss_pred EECCCCCEEEccCccceeCCCCCC---CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHH
Confidence 999999999999999986543321 12335788999999999989999999999999999999999998533110
Q ss_pred ----------cccHHHHH----Hhhccccc-----cccccccCCC-----CccCHHHHHHHHHHHHhccCCCCCCCCCHH
Q 002250 856 ----------SKDIVNWV----YSKMDSRD-----SMLTVVDPNI-----SEILKEDALKVLRIAIHCTNKLPAFRPSMR 911 (947)
Q Consensus 856 ----------~~~~~~~~----~~~~~~~~-----~~~~~~d~~~-----~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 911 (947)
..++.+.. ........ .+........ .......+..+.+++.+|++.||++|||+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ 306 (353)
T cd07850 227 NKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVD 306 (353)
T ss_pred HHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHH
Confidence 00000000 00000000 0000000000 000123455688999999999999999999
Q ss_pred HHHHH
Q 002250 912 VVVQM 916 (947)
Q Consensus 912 ev~~~ 916 (947)
|++++
T Consensus 307 eiL~~ 311 (353)
T cd07850 307 DALQH 311 (353)
T ss_pred HHhcC
Confidence 99964
No 347
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=5.2e-32 Score=297.62 Aligned_cols=269 Identities=19% Similarity=0.227 Sum_probs=194.0
Q ss_pred HHhhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcccccc
Q 002250 626 EIIDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNV 704 (947)
Q Consensus 626 ~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 704 (947)
+..++|++.+.||+|+||.||+|... +++.||||.+.... ........+.+|++++++++||||
T Consensus 9 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~---------------~~~~~~~~~~~e~~~l~~l~h~~i 73 (310)
T cd07865 9 DEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMEN---------------EKEGFPITALREIKILQLLKHENV 73 (310)
T ss_pred chhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccC---------------CcCCchhHHHHHHHHHHhCCCCCc
Confidence 44578999999999999999999965 68999999883211 011223345689999999999999
Q ss_pred ceEEEEEecCCc--------cEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCC
Q 002250 705 VKLYCSITSEDS--------NLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSS 776 (947)
Q Consensus 705 v~l~~~~~~~~~--------~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~ 776 (947)
+++++++...+. .++||||++ +++.+++... ...+++.....++.|++.||+||| +.+++|+||||+
T Consensus 74 v~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dl~p~ 148 (310)
T cd07865 74 VNLIEICRTKATPYNRYKGSFYLVFEFCE-HDLAGLLSNK-NVKFTLSEIKKVMKMLLNGLYYIH---RNKILHRDMKAA 148 (310)
T ss_pred cceEEEEecccccccCCCceEEEEEcCCC-cCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHH
Confidence 999999876543 499999995 5888887653 346899999999999999999999 889999999999
Q ss_pred CeEecCCCCeEEeccccceecccCCCC--cceecccccccccCccccccCC-CCCccchHHHHHHHHHHHhCCCCCCCCC
Q 002250 777 NILLDLEWKPRIADFGLAKIVQTGEAG--DLTHVIAGTHGYIAPEYAYTCK-INEKSDVYSFGVVLMELVTGKRPIVPEF 853 (947)
Q Consensus 777 NIll~~~~~~kl~DfG~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slGv~l~elltg~~p~~~~~ 853 (947)
||+++.++.+||+|||.+......... .......++..|+|||++.+.. ++.++||||||+++|||++|+.||....
T Consensus 149 nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~ 228 (310)
T cd07865 149 NILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNT 228 (310)
T ss_pred HEEECCCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCC
Confidence 999999999999999999765433221 1112345788999999886644 6889999999999999999999985332
Q ss_pred CCcccHHHHHHhhccc-cccc-c-----ccccC-CCCcc-----C-----HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 854 GDSKDIVNWVYSKMDS-RDSM-L-----TVVDP-NISEI-----L-----KEDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 854 ~~~~~~~~~~~~~~~~-~~~~-~-----~~~d~-~~~~~-----~-----~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
. ............. ...+ . ...+. ..+.. . ......+.+++.+|++.||++|||+.|+++
T Consensus 229 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 229 E--QHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred H--HHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 1 1111111110000 0000 0 00000 00000 0 001235678999999999999999999986
Q ss_pred H
Q 002250 916 M 916 (947)
Q Consensus 916 ~ 916 (947)
+
T Consensus 307 h 307 (310)
T cd07865 307 H 307 (310)
T ss_pred C
Confidence 3
No 348
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=4.1e-32 Score=297.16 Aligned_cols=268 Identities=25% Similarity=0.295 Sum_probs=197.5
Q ss_pred HHhhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcccccc
Q 002250 626 EIIDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNV 704 (947)
Q Consensus 626 ~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 704 (947)
...++|++.+.||+|+||.||+|..+ +++.||||++.... ........+.+|++++++++||||
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~---------------~~~~~~~~~~~e~~~~~~l~h~~i 68 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDN---------------EKEGFPITAIREIKILRQLNHRNI 68 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecc---------------cccCchHHHHHHHHHHHhCCCCCe
Confidence 34678999999999999999999976 68999999984221 111233567789999999999999
Q ss_pred ceEEEEEecCC----------ccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCC
Q 002250 705 VKLYCSITSED----------SNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVK 774 (947)
Q Consensus 705 v~l~~~~~~~~----------~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlk 774 (947)
+++++++.+.. ..++|+||+++ ++.+.+... ...+++..+..++.|++.||+||| +.+|+|||||
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~ 143 (302)
T cd07864 69 VNLKEIVTDKQDALDFKKDKGAFYLVFEYMDH-DLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCH---KKNFLHRDIK 143 (302)
T ss_pred eeeeheecCcchhhhccccCCcEEEEEcccCc-cHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCC
Confidence 99999987655 68999999975 777777653 346899999999999999999999 8899999999
Q ss_pred CCCeEecCCCCeEEeccccceecccCCCCcceecccccccccCccccccC-CCCCccchHHHHHHHHHHHhCCCCCCCCC
Q 002250 775 SSNILLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTC-KINEKSDVYSFGVVLMELVTGKRPIVPEF 853 (947)
Q Consensus 775 p~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~ 853 (947)
|+||++++++.+||+|||.+......... ......++..|+|||.+.+. .++.++|||||||++|||++|+.||....
T Consensus 144 p~nili~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~ 222 (302)
T cd07864 144 CSNILLNNKGQIKLADFGLARLYNSEESR-PYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQ 222 (302)
T ss_pred HHHEEECCCCcEEeCcccccccccCCccc-ccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999765443321 11223467889999988653 47889999999999999999999985321
Q ss_pred CCcccHHHHHHhhcccc-c-ccccc--------ccC------CCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 854 GDSKDIVNWVYSKMDSR-D-SMLTV--------VDP------NISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 854 ~~~~~~~~~~~~~~~~~-~-~~~~~--------~d~------~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
.......+....... . ....+ .++ .........+..+.+++.+|++.+|++||++.+++++
T Consensus 223 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 223 --ELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred --hHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 111111111111000 0 00000 000 0001111235678999999999999999999999863
No 349
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=2.1e-32 Score=298.28 Aligned_cols=254 Identities=24% Similarity=0.335 Sum_probs=192.2
Q ss_pred hhccCCcccccccCceeEEEEEeCC-CcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-cccccc
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLNS-GKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-RHVNVV 705 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv 705 (947)
.++|++.+.||+|+||.||+|..++ ++.||||++.... .......+.+|+.++.+. .||||+
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~----------------~~~~~~~~~~e~~~~~~~~~~~~i~ 77 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTG----------------NKEENKRILMDLDVVLKSHDCPYIV 77 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccC----------------ChHHHHHHHHHHHHHHhccCCCchH
Confidence 3678889999999999999999774 8999999984211 112234556677777666 499999
Q ss_pred eEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCC
Q 002250 706 KLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWK 785 (947)
Q Consensus 706 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~ 785 (947)
++++++..+...|+||||++ +++.++..... ..+++..+..++.|++.|++|||+ ..+|+||||+|+||++++++.
T Consensus 78 ~~~~~~~~~~~~~~v~e~~~-~~l~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~--~~~i~H~dl~p~nill~~~~~ 153 (296)
T cd06618 78 KCYGYFITDSDVFICMELMS-TCLDKLLKRIQ-GPIPEDILGKMTVAIVKALHYLKE--KHGVIHRDVKPSNILLDASGN 153 (296)
T ss_pred hhheeeecCCeEEEEeeccC-cCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh--hCCEecCCCcHHHEEEcCCCC
Confidence 99999999999999999984 57777766532 368999999999999999999993 258999999999999999999
Q ss_pred eEEeccccceecccCCCCcceecccccccccCccccccCC----CCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHH
Q 002250 786 PRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCK----INEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVN 861 (947)
Q Consensus 786 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~ 861 (947)
++|+|||++......... ....++..|+|||++.+.. ++.++||||||+++|||++|+.||..... ..+
T Consensus 154 ~kL~dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----~~~ 226 (296)
T cd06618 154 VKLCDFGISGRLVDSKAK---TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKT----EFE 226 (296)
T ss_pred EEECccccchhccCCCcc---cCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchh----HHH
Confidence 999999998765433221 1235788999999987553 78899999999999999999999843211 111
Q ss_pred HHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 862 WVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 862 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
.......... +..+ .......++.+++.+|++.||++||++.+++++
T Consensus 227 ~~~~~~~~~~-------~~~~-~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 227 VLTKILQEEP-------PSLP-PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred HHHHHhcCCC-------CCCC-CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1111111110 0011 011234568899999999999999999999865
No 350
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=2.8e-32 Score=292.34 Aligned_cols=249 Identities=28% Similarity=0.357 Sum_probs=195.4
Q ss_pred ccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEEEEecCC
Q 002250 637 IGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYCSITSED 715 (947)
Q Consensus 637 iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 715 (947)
||+|+||.||+|+.. +|+.+|+|++..... ........+.+|++++++++||||+++++.+..+.
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~--------------~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~ 66 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADM--------------IRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKK 66 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhh--------------hhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCc
Confidence 689999999999976 599999998842211 11234567889999999999999999999999999
Q ss_pred ccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEeccccce
Q 002250 716 SNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFGLAK 795 (947)
Q Consensus 716 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 795 (947)
..|+||||+++++|.+++.+.. .+++..+..++.|++.||+||| +.+++||||+|+||++++++.++|+|||++.
T Consensus 67 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~di~~~nil~~~~~~~~l~dfg~~~ 141 (265)
T cd05579 67 NLYLVMEYLPGGDLASLLENVG--SLDEDVARIYIAEIVLALEYLH---SNGIIHRDLKPDNILIDSNGHLKLTDFGLSK 141 (265)
T ss_pred EEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HcCeecCCCCHHHeEEcCCCCEEEEecccch
Confidence 9999999999999999998743 6899999999999999999999 8999999999999999999999999999987
Q ss_pred ecccCCC------CcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhccc
Q 002250 796 IVQTGEA------GDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDS 869 (947)
Q Consensus 796 ~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 869 (947)
....... ........++..|+|||.......+.++||||||+++||+++|+.||.... ...........
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-----~~~~~~~~~~~ 216 (265)
T cd05579 142 VGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGET-----PEEIFQNILNG 216 (265)
T ss_pred hcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHhcC
Confidence 5433311 011223457889999999988889999999999999999999999985321 11111111111
Q ss_pred cccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 002250 870 RDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLE 918 (947)
Q Consensus 870 ~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~ 918 (947)
... .+.. ...+..+.+++.+|++.+|++|||+.++.+.|+
T Consensus 217 ~~~--------~~~~-~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 217 KIE--------WPED-VEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred CcC--------CCcc-ccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 110 0110 012567889999999999999999966666554
No 351
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=3.6e-32 Score=289.48 Aligned_cols=249 Identities=27% Similarity=0.412 Sum_probs=201.1
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
+|++.+.||+|++|.||+|... +++.||+|.+..... .......+.+|++++++++|||+++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---------------~~~~~~~~~~e~~~l~~l~~~~i~~~~ 65 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKI---------------KEEALKSIMQEIDLLKNLKHPNIVKYI 65 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEeccccc---------------CHHHHHHHHHHHHHHHhCCCCCccEEE
Confidence 4778899999999999999865 688999999842211 113446789999999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRI 788 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 788 (947)
+++..+...++||||+++++|.+++... ..+++..+..++.|++.|+.||| +.+++||||+|+||+++.++.++|
T Consensus 66 ~~~~~~~~~~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~~l 140 (254)
T cd06627 66 GSIETSDSLYIILEYAENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLH---EQGVIHRDIKAANILTTKDGVVKL 140 (254)
T ss_pred EEEEeCCEEEEEEecCCCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEECCCCCEEE
Confidence 9999999999999999999999999864 46899999999999999999999 899999999999999999999999
Q ss_pred eccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcc
Q 002250 789 ADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMD 868 (947)
Q Consensus 789 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 868 (947)
+|||.+......... .....++..|+|||...+..++.++||||+|+++|||++|+.||.... .... ......
T Consensus 141 ~d~~~~~~~~~~~~~--~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~----~~~~-~~~~~~ 213 (254)
T cd06627 141 ADFGVATKLNDVSKD--DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLN----PMAA-LFRIVQ 213 (254)
T ss_pred eccccceecCCCccc--ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCcc----HHHH-HHHHhc
Confidence 999999876544321 223467899999999988788899999999999999999999985321 1111 111111
Q ss_pred ccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 869 SRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 869 ~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
. .....+......+.+++.+|++.+|++|||+.++++
T Consensus 214 ~----------~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 214 D----------DHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred c----------CCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 0 011122233456789999999999999999999985
No 352
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=4.9e-32 Score=294.26 Aligned_cols=245 Identities=27% Similarity=0.375 Sum_probs=194.0
Q ss_pred cccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEEEEe
Q 002250 634 ENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYCSIT 712 (947)
Q Consensus 634 ~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 712 (947)
...||+|+||.||+|..+ +++.||||++... .......+.+|+.+++.++|+||+++++++.
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~-----------------~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 87 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLR-----------------KQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEeccc-----------------chhHHHHHHHHHHHHHhcCCcchhheeeEEE
Confidence 467999999999999864 7899999987211 1123456889999999999999999999999
Q ss_pred cCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEeccc
Q 002250 713 SEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFG 792 (947)
Q Consensus 713 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 792 (947)
.++..++||||+++++|.+++.. ..+++.....++.|++.|++||| +.+++||||+|+||+++.++.++|+|||
T Consensus 88 ~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH---~~givH~dl~p~Nilv~~~~~~~l~dfg 161 (292)
T cd06657 88 VGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLKALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFG 161 (292)
T ss_pred eCCEEEEEEecCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEcccc
Confidence 99999999999999999998764 34788999999999999999999 8899999999999999999999999999
Q ss_pred cceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcccccc
Q 002250 793 LAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDSRDS 872 (947)
Q Consensus 793 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 872 (947)
.+........ ......|++.|+|||+.....++.++|+||+|+++|||++|+.||.... ............
T Consensus 162 ~~~~~~~~~~--~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~--~~~~~~~~~~~~----- 232 (292)
T cd06657 162 FCAQVSKEVP--RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP--PLKAMKMIRDNL----- 232 (292)
T ss_pred cceecccccc--cccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHhhC-----
Confidence 9875543221 1223468899999999988888999999999999999999999985321 111111111100
Q ss_pred ccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 873 MLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 873 ~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
.+.+. ........+.+++.+|++.+|.+||++.+++++
T Consensus 233 -----~~~~~-~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 233 -----PPKLK-NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred -----CcccC-CcccCCHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence 01111 112234567788999999999999999999874
No 353
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.98 E-value=5.6e-32 Score=293.17 Aligned_cols=262 Identities=20% Similarity=0.269 Sum_probs=199.2
Q ss_pred cCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEE
Q 002250 631 VKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYC 709 (947)
Q Consensus 631 ~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 709 (947)
|+..+.||+|++|.||+|... +++.+|+|++..... .......+.+|++++++++|+||+++++
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---------------~~~~~~~~~~e~~~l~~l~~~~i~~~~~ 65 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFE---------------SEGIPKTALREIKLLKELNHPNIIKLLD 65 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccc---------------cchhHHHHHHHHHHHHHhcCCCcchHHH
Confidence 567788999999999999965 789999998842211 1123457788999999999999999999
Q ss_pred EEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEe
Q 002250 710 SITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIA 789 (947)
Q Consensus 710 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 789 (947)
++..++..++||||+++ ++.+++.... ..+++..+..++.|++.|++||| +.+|+|+||+|+||+++.++.++|+
T Consensus 66 ~~~~~~~~~~v~e~~~~-~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~ 140 (283)
T cd05118 66 VFRHKGDLYLVFEFMDT-DLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCH---SHGILHRDLKPENLLINTEGVLKLA 140 (283)
T ss_pred hhccCCCEEEEEeccCC-CHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHH---HCCeeecCcCHHHEEECCCCcEEEe
Confidence 99999999999999965 8888887633 56899999999999999999999 8999999999999999999999999
Q ss_pred ccccceecccCCCCcceecccccccccCccccccC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcc
Q 002250 790 DFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTC-KINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMD 868 (947)
Q Consensus 790 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 868 (947)
|||.+........ ......++..|+|||.+.+. .++.++|+||+|+++|+|++|+.||..... .+..........
T Consensus 141 df~~~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~--~~~~~~~~~~~~ 216 (283)
T cd05118 141 DFGLARSFGSPVR--PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSE--IDQLFKIFRTLG 216 (283)
T ss_pred eeeeeEecCCCcc--cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHcC
Confidence 9999987654431 11234578899999998776 688999999999999999999999843211 111111100000
Q ss_pred c-cc---------------cccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 869 S-RD---------------SMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 869 ~-~~---------------~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
. .. ......+....+........+.+++.+|++.||.+||++.+++.+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 217 TPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred CCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 0 00 000000011122233456789999999999999999999999863
No 354
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.98 E-value=1.2e-31 Score=287.30 Aligned_cols=255 Identities=24% Similarity=0.362 Sum_probs=195.7
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
.+|++.+.||+|+||.||+|... +++.||+|.+...... .........+.+|++++++++||||+++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~------------~~~~~~~~~~~~ei~~l~~l~h~~i~~~ 69 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDS------------QETSKEVNALECEIQLLKNLRHDRIVQY 69 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCccc------------chhhHHHHHHHHHHHHHHHcCCCCcceE
Confidence 36888999999999999999964 6899999987321100 0112334678899999999999999999
Q ss_pred EEEEecC--CccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCC
Q 002250 708 YCSITSE--DSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWK 785 (947)
Q Consensus 708 ~~~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~ 785 (947)
++++... ...++|+||+++++|.+++.... .+++.....++.|++.|++||| +.+++||||||+||+++.++.
T Consensus 70 ~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~--~l~~~~~~~~~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~ 144 (264)
T cd06653 70 YGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYG--ALTENVTRRYTRQILQGVSYLH---SNMIVHRDIKGANILRDSAGN 144 (264)
T ss_pred EEEEEcCCCCEEEEEEEeCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCC
Confidence 9998764 45789999999999999997643 4788888899999999999999 899999999999999999999
Q ss_pred eEEeccccceecccCCC-CcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 002250 786 PRIADFGLAKIVQTGEA-GDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVY 864 (947)
Q Consensus 786 ~kl~DfG~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~ 864 (947)
++|+|||+++....... ........++..|+|||++.+..++.++|+|||||++|||++|+.||... ..... ..
T Consensus 145 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~----~~~~~-~~ 219 (264)
T cd06653 145 VKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEY----EAMAA-IF 219 (264)
T ss_pred EEECccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCcc----CHHHH-HH
Confidence 99999999975432111 11112345889999999998888999999999999999999999998432 11111 11
Q ss_pred hhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 865 SKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 865 ~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
..... +..+..+......+.+++.+|+. +|.+||++.+++.
T Consensus 220 ~~~~~---------~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 220 KIATQ---------PTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred HHHcC---------CCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 11100 01122333444668888999999 5799999998875
No 355
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.98 E-value=1.1e-31 Score=291.48 Aligned_cols=263 Identities=25% Similarity=0.312 Sum_probs=196.8
Q ss_pred cCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEE
Q 002250 631 VKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYC 709 (947)
Q Consensus 631 ~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 709 (947)
|++.+.||+|+||.||+|... +++.+|+|++.... ........+.+|++++++++|||++++++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~---------------~~~~~~~~~~~e~~~l~~l~~~~i~~~~~ 65 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN---------------EKEGFPITAIREIKLLQKLRHPNIVRLKE 65 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc---------------ccccchHHHHHHHHHHHhccCCCeeehee
Confidence 567788999999999999966 58999999984221 11223456888999999999999999999
Q ss_pred EEecC--CccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 710 SITSE--DSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 710 ~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
++... +..++||||+++ +|.+++.... ..+++..+..++.|++.|++||| ..+++|+||+|+||++++++.++
T Consensus 66 ~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH---~~~~~h~dl~p~nil~~~~~~~~ 140 (287)
T cd07840 66 IVTSKGKGSIYMVFEYMDH-DLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLH---SNGILHRDIKGSNILINNDGVLK 140 (287)
T ss_pred eEecCCCCcEEEEeccccc-cHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEEcCCCCEE
Confidence 99988 789999999974 8888887632 46899999999999999999999 88999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYT-CKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSK 866 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 866 (947)
|+|||.+......... ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||..... ..........
T Consensus 141 l~d~g~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~--~~~~~~~~~~ 217 (287)
T cd07840 141 LADFGLARPYTKRNSA-DYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTE--LEQLEKIFEL 217 (287)
T ss_pred EccccceeeccCCCcc-cccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHH
Confidence 9999999866544321 1223356788999998765 3578999999999999999999999853321 1111111111
Q ss_pred cccc--cccccc--------------ccCCCCccCHH-HHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 867 MDSR--DSMLTV--------------VDPNISEILKE-DALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 867 ~~~~--~~~~~~--------------~d~~~~~~~~~-~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
.... ..+... ....+.+.... ++..+.+++.+|++.+|++||++.++++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 218 CGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred hCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 0000 000000 00000111112 25678999999999999999999999863
No 356
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.98 E-value=1.5e-31 Score=288.68 Aligned_cols=245 Identities=24% Similarity=0.278 Sum_probs=185.7
Q ss_pred cccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHH---HHHhhccccccceEEEEE
Q 002250 636 LIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEV---ATLSAVRHVNVVKLYCSI 711 (947)
Q Consensus 636 ~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~---~~l~~l~h~niv~l~~~~ 711 (947)
.||+|+||.||+|... +++.||+|.+....... ......+..|. +.++...||+|+++++++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 66 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM--------------KQGETLALNERIMLSLVSTGDCPFIVCMSYAF 66 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeecccccc--------------chhHHHHHHHHHHHHHHHhCCCCcEeeeeeee
Confidence 4899999999999954 68999999984321100 01111233343 344455799999999999
Q ss_pred ecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEecc
Q 002250 712 TSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADF 791 (947)
Q Consensus 712 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 791 (947)
..++..++||||+++|+|.+++... ..+++..+..++.|++.|++||| +.+|+||||||+||+++.++.++|+||
T Consensus 67 ~~~~~~~~v~e~~~g~~L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~nili~~~~~~kl~df 141 (278)
T cd05606 67 HTPDKLSFILDLMNGGDLHYHLSQH--GVFSEAEMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDL 141 (278)
T ss_pred ecCCEEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCCCCHHHEEECCCCCEEEccC
Confidence 9999999999999999999988753 45899999999999999999999 899999999999999999999999999
Q ss_pred ccceecccCCCCcceecccccccccCccccccC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcccc
Q 002250 792 GLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTC-KINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDSR 870 (947)
Q Consensus 792 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 870 (947)
|++....... .....|+..|+|||++.++ .++.++||||+||++|||++|+.||........ .........
T Consensus 142 g~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~--~~~~~~~~~-- 213 (278)
T cd05606 142 GLACDFSKKK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEIDRMTLT-- 213 (278)
T ss_pred cCccccCccC----CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccch--HHHHHHhhc--
Confidence 9987543322 1234689999999998754 588999999999999999999999964321111 111000000
Q ss_pred ccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 002250 871 DSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRP-----SMRVVVQM 916 (947)
Q Consensus 871 ~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~ev~~~ 916 (947)
.... .+......+.+++.+|+..+|.+|| ++.+++++
T Consensus 214 ------~~~~---~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 214 ------MAVE---LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred ------cCCC---CCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence 0111 1222346788899999999999999 99999853
No 357
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.98 E-value=1.6e-31 Score=293.42 Aligned_cols=249 Identities=29% Similarity=0.377 Sum_probs=192.9
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
+.|...+.||+|+||+||+|+.. +++.||+|++..... ........+.+|++++++++|||++++
T Consensus 21 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~--------------~~~~~~~~~~~E~~~l~~l~h~~iv~~ 86 (313)
T cd06633 21 EIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGK--------------QTNEKWQDIIKEVKFLQQLKHPNTIEY 86 (313)
T ss_pred HHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEecccc--------------CchHHHHHHHHHHHHHHhCCCCCCccE
Confidence 44667788999999999999964 688999998842210 011223567889999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
++++.++...|+||||+. |++.+++... ..++++..+..++.|++.|++||| +.+++||||+|+||+++.++.++
T Consensus 87 ~~~~~~~~~~~lv~e~~~-~~l~~~l~~~-~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dl~p~nili~~~~~~k 161 (313)
T cd06633 87 KGCYLKEHTAWLVMEYCL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVK 161 (313)
T ss_pred EEEEEeCCEEEEEEecCC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChhhEEECCCCCEE
Confidence 999999999999999995 6788887653 346899999999999999999999 88999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccc---cCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAY---TCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVY 864 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~ 864 (947)
|+|||.+..... .....|+..|+|||++. .+.++.++|||||||++|||++|..||... +......
T Consensus 162 L~dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~-----~~~~~~~ 230 (313)
T cd06633 162 LADFGSASKSSP------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM-----NAMSALY 230 (313)
T ss_pred EeecCCCcccCC------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-----ChHHHHH
Confidence 999999864322 12346889999999984 456888999999999999999999998432 1111111
Q ss_pred hhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 865 SKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 865 ~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
....... ... ........+.+++.+|++.+|.+||++.+++++
T Consensus 231 ~~~~~~~--~~~-------~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 231 HIAQNDS--PTL-------QSNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred HHHhcCC--CCC-------CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1111110 000 011123457889999999999999999999964
No 358
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.98 E-value=3.5e-32 Score=302.04 Aligned_cols=268 Identities=20% Similarity=0.258 Sum_probs=199.0
Q ss_pred hhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccce
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVK 706 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 706 (947)
.++|++.+.||+|+||+||+|... +++.||||.+.... ........+.+|+.+++.++||||++
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~---------------~~~~~~~~~~~E~~~l~~l~h~ni~~ 68 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAF---------------DNRIDAKRTLREIKLLRHLDHENVIA 68 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccc---------------cccchhHHHHHHHHHHHhcCCCCccc
Confidence 467889999999999999999954 78999999884211 11123356678999999999999999
Q ss_pred EEEEEecC-----CccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEec
Q 002250 707 LYCSITSE-----DSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLD 781 (947)
Q Consensus 707 l~~~~~~~-----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~ 781 (947)
+++++... ...++||||+. ++|.+++... ..+++.....++.|++.||+||| +.+++||||||+||+++
T Consensus 69 ~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dlkp~Nil~~ 142 (337)
T cd07858 69 IKDIMPPPHREAFNDVYIVYELMD-TDLHQIIRSS--QTLSDDHCQYFLYQLLRGLKYIH---SANVLHRDLKPSNLLLN 142 (337)
T ss_pred hHHheecccccccCcEEEEEeCCC-CCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEc
Confidence 99988654 34799999995 7899888763 45889999999999999999999 89999999999999999
Q ss_pred CCCCeEEeccccceecccCCCCcceecccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHH
Q 002250 782 LEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYT-CKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIV 860 (947)
Q Consensus 782 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~ 860 (947)
.++.+||+|||++....... .......++..|+|||.+.. ..++.++|||||||++|||++|+.||..... ....
T Consensus 143 ~~~~~kL~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~--~~~~ 218 (337)
T cd07858 143 ANCDLKICDFGLARTTSEKG--DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDY--VHQL 218 (337)
T ss_pred CCCCEEECcCccccccCCCc--ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCCh--HHHH
Confidence 99999999999998654332 11223457889999998865 4588999999999999999999999853210 0000
Q ss_pred HHHHhhccc--ccc---------------ccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH--hhcc
Q 002250 861 NWVYSKMDS--RDS---------------MLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM--LEEA 920 (947)
Q Consensus 861 ~~~~~~~~~--~~~---------------~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~--L~~~ 920 (947)
......... ... .....++............+.+++.+|++.+|++|||+.|++++ ++.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~ 297 (337)
T cd07858 219 KLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL 297 (337)
T ss_pred HHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence 000000000 000 00000111111122345668899999999999999999999987 5554
No 359
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.98 E-value=3.7e-32 Score=301.62 Aligned_cols=266 Identities=21% Similarity=0.268 Sum_probs=196.9
Q ss_pred hhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccce
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVK 706 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 706 (947)
.++|++.+.||+|+||.||+|... +|+.||+|++.... ........+.+|+.++++++||||++
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~---------------~~~~~~~~~~~e~~~l~~l~h~~iv~ 68 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAF---------------DVPTLAKRTLRELKILRHFKHDNIIA 68 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEecccc---------------ccccchHHHHHHHHHHHhcCCCCccC
Confidence 367889999999999999999955 69999999984211 11123456778999999999999999
Q ss_pred EEEEEec----CCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecC
Q 002250 707 LYCSITS----EDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDL 782 (947)
Q Consensus 707 l~~~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~ 782 (947)
+++++.. ....++||||+. ++|.+++... ..+++.....++.|++.||+||| ..+|+||||||+||++++
T Consensus 69 ~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~ 142 (334)
T cd07855 69 IRDILRPPGADFKDVYVVMDLME-SDLHHIIHSD--QPLTEEHIRYFLYQLLRGLKYIH---SANVIHRDLKPSNLLVNE 142 (334)
T ss_pred HHHhccccCCCCceEEEEEehhh-hhHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcC
Confidence 9988764 345789999995 6899988753 34899999999999999999999 889999999999999999
Q ss_pred CCCeEEeccccceecccCCCC--cceecccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccH
Q 002250 783 EWKPRIADFGLAKIVQTGEAG--DLTHVIAGTHGYIAPEYAYT-CKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDI 859 (947)
Q Consensus 783 ~~~~kl~DfG~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~ 859 (947)
++.+||+|||++......... .......|+..|+|||.+.. ..++.++|||||||++|||++|+.||..... ...
T Consensus 143 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~--~~~ 220 (334)
T cd07855 143 DCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNY--VHQ 220 (334)
T ss_pred CCcEEecccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCCh--HHH
Confidence 999999999999765433221 11123468899999998865 4588999999999999999999999954311 000
Q ss_pred HHHHHhhcc-c----------ccc--ccccc----cCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 860 VNWVYSKMD-S----------RDS--MLTVV----DPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 860 ~~~~~~~~~-~----------~~~--~~~~~----d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
......... . ... ..... ..............+.+++.+|++.+|++||++.+++.+
T Consensus 221 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 221 LKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred HHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 000000000 0 000 00000 000111223346778999999999999999999998874
No 360
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.98 E-value=1e-32 Score=280.82 Aligned_cols=259 Identities=22% Similarity=0.264 Sum_probs=209.2
Q ss_pred hccCCcccccccCceeEEEEEeCC------CcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcccc
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLNS------GKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHV 702 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 702 (947)
.+++....+-+|.||.||.|.+.+ .+.|.||.++.. ..+.....+..|.-.+..+.||
T Consensus 284 ~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~----------------AS~iQv~~~L~es~lly~~sH~ 347 (563)
T KOG1024|consen 284 CRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQH----------------ASQIQVNLLLQESMLLYGASHP 347 (563)
T ss_pred hheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhc----------------ccHHHHHHHHHHHHHHhcCcCC
Confidence 445666778999999999997653 345666655211 1123345677888888889999
Q ss_pred ccceEEEEEec-CCccEEEEeccCCCChHHHhhhc------CCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCC
Q 002250 703 NVVKLYCSITS-EDSNLLVYEYLPNGSLWDRLHTC------HKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKS 775 (947)
Q Consensus 703 niv~l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~------~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp 775 (947)
|+..+.+++.+ .+..+++|.++.-|+|..++..+ ..+.....+...++.|++.|++||| +++|||.||.+
T Consensus 348 nll~V~~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh---~~~ViHkDiAa 424 (563)
T KOG1024|consen 348 NLLSVLGVSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLH---NHGVIHKDIAA 424 (563)
T ss_pred CccceeEEEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHH---hcCcccchhhh
Confidence 99999998865 45678999999999999999844 3456777888899999999999999 89999999999
Q ss_pred CCeEecCCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCC
Q 002250 776 SNILLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFG 854 (947)
Q Consensus 776 ~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~ 854 (947)
+|+++|+.-.+||+|-.+++...+.+++...+..-....||+||.+....|+.++|||||||++|||+| |+.|+...
T Consensus 425 RNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeI-- 502 (563)
T KOG1024|consen 425 RNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEI-- 502 (563)
T ss_pred hcceehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCcccc--
Confidence 999999999999999999999988888776666667889999999999999999999999999999999 99998422
Q ss_pred CcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccC
Q 002250 855 DSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAE 921 (947)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~ 921 (947)
+..++.. -+.|+..-..+.+++.+++.+|.-||..+|++||+++|++.-|.++-
T Consensus 503 ---DPfEm~~----------ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~ 556 (563)
T KOG1024|consen 503 ---DPFEMEH----------YLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFH 556 (563)
T ss_pred ---CHHHHHH----------HHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHH
Confidence 2222211 12233333455678889999999999999999999999999888753
No 361
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.98 E-value=1.6e-31 Score=292.99 Aligned_cols=257 Identities=28% Similarity=0.351 Sum_probs=198.2
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
+.|+..+.||+|+||.||+|+.. +++.+|+|.+..... .......++.+|+++++.++|+|++++
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~--------------~~~~~~~~~~~e~~~l~~l~h~~i~~~ 80 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK--------------QSNEKWQDIIKEVRFLQKLRHPNTIQY 80 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccc--------------cChHHHHHHHHHHHHHHhCCCCCcccE
Confidence 45777888999999999999965 688999998732110 011223567789999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
++++..+...++||||+. |++.+++... ...+++..+..++.|++.|++||| +.+++||||+|+||+++.++.++
T Consensus 81 ~~~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~k 155 (308)
T cd06634 81 RGCYLREHTAWLVMEYCL-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVK 155 (308)
T ss_pred EEEEEcCCeeEEEEEccC-CCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHhEEECCCCcEE
Confidence 999999999999999996 6888877643 345788999999999999999999 88999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccc---cCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAY---TCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVY 864 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~ 864 (947)
++|||++...... ....++..|+|||++. .+.++.++|||||||++|||++|+.||.... -.....
T Consensus 156 l~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-----~~~~~~ 224 (308)
T cd06634 156 LGDFGSASIMAPA------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-----AMSALY 224 (308)
T ss_pred ECCcccceeecCc------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCcccc-----HHHHHH
Confidence 9999998765432 2345788999999974 3567889999999999999999999984321 111111
Q ss_pred hhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCCCC
Q 002250 865 SKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAEPCS 924 (947)
Q Consensus 865 ~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 924 (947)
....... +. .........+.+++.+||+.+|++||++.++++.-......+
T Consensus 225 ~~~~~~~-------~~--~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~~ 275 (308)
T cd06634 225 HIAQNES-------PA--LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERP 275 (308)
T ss_pred HHhhcCC-------CC--cCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccccCC
Confidence 1111100 00 011233456788999999999999999999998765555433
No 362
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.98 E-value=1.7e-32 Score=297.59 Aligned_cols=253 Identities=26% Similarity=0.340 Sum_probs=202.1
Q ss_pred HhhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccc
Q 002250 627 IIDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVV 705 (947)
Q Consensus 627 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 705 (947)
-...|.+...||+|.|+.|..|+.. ++..||||.+..... .....+.+.+|++++..++|||||
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~l---------------n~~~~~k~~rev~imk~l~HPnIv 118 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQL---------------NPSKRQKLGREVDIMKSLNHPNIV 118 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhccc---------------ChHHHHHHHHHHHHHHhcCCccee
Confidence 3567889999999999999999955 799999999853221 112234478999999999999999
Q ss_pred eEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCC
Q 002250 706 KLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWK 785 (947)
Q Consensus 706 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~ 785 (947)
+++.+...+...|+||||+.+|.+.+++.+.++. .......++.|+.+|++|+| ++.|||||||++||+++.+.+
T Consensus 119 kl~~v~~t~~~lylV~eya~~ge~~~yl~~~gr~--~e~~ar~~F~q~vsaveYcH---~k~ivHrdLk~eNilL~~~mn 193 (596)
T KOG0586|consen 119 KLFSVIETEATLYLVMEYASGGELFDYLVKHGRM--KEKEARAKFRQIVSAVEYCH---SKNIVHRDLKAENILLDENMN 193 (596)
T ss_pred eeeeeeeecceeEEEEEeccCchhHHHHHhcccc--hhhhhhhhhHHHHHHHHHHh---hcceeccccchhhcccccccc
Confidence 9999999999999999999999999999986653 33667778899999999999 999999999999999999999
Q ss_pred eEEeccccceecccCCCCcceecccccccccCccccccCCCC-CccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 002250 786 PRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKIN-EKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVY 864 (947)
Q Consensus 786 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~ 864 (947)
+||+|||++.++..... ....+|++.|.|||+..+..|+ +++|+||+|+++|-|+.|..||++. .+...-
T Consensus 194 ikIaDfgfS~~~~~~~~---lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~-----~lk~Lr- 264 (596)
T KOG0586|consen 194 IKIADFGFSTFFDYGLM---LQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQ-----NLKELR- 264 (596)
T ss_pred eeeeccccceeeccccc---ccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCc-----cccccc-
Confidence 99999999998875443 2346899999999999887764 7899999999999999999999532 111110
Q ss_pred hhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 002250 865 SKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLE 918 (947)
Q Consensus 865 ~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~ 918 (947)
..++..++ .++.-...++.+++++++-.+|.+|++++++.+.-.
T Consensus 265 ---------~rvl~gk~-rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W 308 (596)
T KOG0586|consen 265 ---------PRVLRGKY-RIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRW 308 (596)
T ss_pred ---------chheeeee-cccceeechhHHHHHHhhccCccccCCHHHhhhhcc
Confidence 11111111 011122234667778999999999999999986543
No 363
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.98 E-value=9.1e-32 Score=287.58 Aligned_cols=246 Identities=26% Similarity=0.299 Sum_probs=186.3
Q ss_pred ccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHH-hhccccccceEEEEEe
Q 002250 635 NLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATL-SAVRHVNVVKLYCSIT 712 (947)
Q Consensus 635 ~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~ 712 (947)
+.||+|+||.||+|... +++.||||++..... ........+..|..++ ...+|+|++++++++.
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~--------------~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~ 67 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDM--------------IAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQ 67 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhh--------------hHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEE
Confidence 46899999999999964 689999998832110 0001122344454444 4558999999999999
Q ss_pred cCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEeccc
Q 002250 713 SEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFG 792 (947)
Q Consensus 713 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 792 (947)
.++..|+||||+++++|.+++.... .+++..+..++.|++.||.||| +.+++||||+|+||++++++.++|+|||
T Consensus 68 ~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg 142 (260)
T cd05611 68 SKDYLYLVMEYLNGGDCASLIKTLG--GLPEDWAKQYIAEVVLGVEDLH---QRGIIHRDIKPENLLIDQTGHLKLTDFG 142 (260)
T ss_pred cCCeEEEEEeccCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEeecc
Confidence 9999999999999999999998643 4788888899999999999999 8999999999999999999999999999
Q ss_pred cceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcccccc
Q 002250 793 LAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDSRDS 872 (947)
Q Consensus 793 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 872 (947)
+++..... ....++..|+|||...+..++.++||||||+++|||++|..||.... ..............
T Consensus 143 ~~~~~~~~------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~ 211 (260)
T cd05611 143 LSRNGLEN------KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAET-----PDAVFDNILSRRIN 211 (260)
T ss_pred cceecccc------ccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHhcccC
Confidence 98754331 23457889999999988888999999999999999999999985321 11111111111100
Q ss_pred ccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 002250 873 MLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQML 917 (947)
Q Consensus 873 ~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L 917 (947)
. . .......+..+.+++.+|++.+|++||++.++.+.+
T Consensus 212 ~----~---~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 212 W----P---EEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred C----C---CcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHH
Confidence 0 0 111123456688999999999999999876555543
No 364
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.98 E-value=4.6e-32 Score=298.18 Aligned_cols=266 Identities=21% Similarity=0.270 Sum_probs=192.6
Q ss_pred hhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccce
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVK 706 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 706 (947)
.++|++.+.||+|+||.||+|... +++.||||++.... ........+.+|++++++++||||++
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~---------------~~~~~~~~~~~e~~~l~~l~h~~i~~ 71 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHN---------------EKDGFPITALREIKILKKLKHPNVVP 71 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEecc---------------CCCCcchhHHHHHHHHHhcCCCCccc
Confidence 578999999999999999999965 68999999884221 11122345678999999999999999
Q ss_pred EEEEEecCC--------ccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCe
Q 002250 707 LYCSITSED--------SNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNI 778 (947)
Q Consensus 707 l~~~~~~~~--------~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NI 778 (947)
+++++.... ..++||||+++ ++...+... ...+++..+..++.|+++||+||| +.+|+||||||+||
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~lv~~~~~~-~l~~~~~~~-~~~~~~~~~~~i~~~l~~al~~lH---~~~i~H~dl~p~ni 146 (311)
T cd07866 72 LIDMAVERPDKSKRKRGSVYMVTPYMDH-DLSGLLENP-SVKLTESQIKCYMLQLLEGINYLH---ENHILHRDIKAANI 146 (311)
T ss_pred hhhheecccccccccCceEEEEEecCCc-CHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHE
Confidence 998875543 35899999964 677777653 346899999999999999999999 89999999999999
Q ss_pred EecCCCCeEEeccccceecccCCCCc---------ceecccccccccCccccccC-CCCCccchHHHHHHHHHHHhCCCC
Q 002250 779 LLDLEWKPRIADFGLAKIVQTGEAGD---------LTHVIAGTHGYIAPEYAYTC-KINEKSDVYSFGVVLMELVTGKRP 848 (947)
Q Consensus 779 ll~~~~~~kl~DfG~a~~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p 848 (947)
++++++.++|+|||+++......... ......+++.|+|||++.+. .++.++||||||+++|||++|+.|
T Consensus 147 l~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~ 226 (311)
T cd07866 147 LIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPI 226 (311)
T ss_pred EECCCCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCC
Confidence 99999999999999997554322111 11234568889999987654 478999999999999999999999
Q ss_pred CCCCCCCcccHHHHHHhhcccc--------ccccc----ccc----CCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHH
Q 002250 849 IVPEFGDSKDIVNWVYSKMDSR--------DSMLT----VVD----PNISEILKEDALKVLRIAIHCTNKLPAFRPSMRV 912 (947)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~--------~~~~~----~~d----~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~e 912 (947)
|..... ....+......... ..... ... +...+........+.+++.+|++.||++|||+.|
T Consensus 227 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~e 304 (311)
T cd07866 227 LQGKSD--IDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASD 304 (311)
T ss_pred CCCCCH--HHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHH
Confidence 853211 11111111000000 00000 000 0111111122356889999999999999999999
Q ss_pred HHH
Q 002250 913 VVQ 915 (947)
Q Consensus 913 v~~ 915 (947)
++.
T Consensus 305 ll~ 307 (311)
T cd07866 305 ALE 307 (311)
T ss_pred Hhc
Confidence 875
No 365
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.98 E-value=9.5e-32 Score=292.06 Aligned_cols=258 Identities=23% Similarity=0.280 Sum_probs=198.6
Q ss_pred cCCcccccccCceeEEEEEeC----CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-cccccc
Q 002250 631 VKPENLIGKGGSGNVYKVVLN----SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-RHVNVV 705 (947)
Q Consensus 631 ~~~~~~iG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv 705 (947)
|++.+.||+|++|.||+|+.. +++.||||++.... ..........+.+|++++.++ +||||+
T Consensus 2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~-------------~~~~~~~~~~~~~E~~~l~~~~~~~~i~ 68 (288)
T cd05583 2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKAT-------------IVQKAKTAEHTRTERQVLEAVRRCPFLV 68 (288)
T ss_pred ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHH-------------HHhhhhHHHHHHHHHHHHHhccCCcchh
Confidence 677889999999999998842 57889999883110 111223345688999999999 599999
Q ss_pred eEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCC
Q 002250 706 KLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWK 785 (947)
Q Consensus 706 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~ 785 (947)
++++.+..+...++||||+++|+|.+++... ..+++.....++.|+++||+||| +.+++||||+|+||+++.++.
T Consensus 69 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH---~~~~~H~dl~p~nil~~~~~~ 143 (288)
T cd05583 69 TLHYAFQTDTKLHLILDYVNGGELFTHLYQR--EHFTESEVRVYIAEIVLALDHLH---QLGIIYRDIKLENILLDSEGH 143 (288)
T ss_pred hhheeeecCCEEEEEEecCCCCcHHHHHhhc--CCcCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCC
Confidence 9999999999999999999999999998763 35788889999999999999999 899999999999999999999
Q ss_pred eEEeccccceecccCCCCcceecccccccccCccccccCC--CCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHH
Q 002250 786 PRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCK--INEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWV 863 (947)
Q Consensus 786 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~ 863 (947)
++++|||+++........ ......|+..|+|||...+.. .+.++||||||+++|||++|..||..... .....+..
T Consensus 144 ~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~-~~~~~~~~ 221 (288)
T cd05583 144 VVLTDFGLSKEFLAEEEE-RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGE-QNSQSEIS 221 (288)
T ss_pred EEEEECcccccccccccc-ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcc-cchHHHHH
Confidence 999999998765443221 122345889999999987655 77899999999999999999999853211 11111111
Q ss_pred HhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhc
Q 002250 864 YSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEE 919 (947)
Q Consensus 864 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~ 919 (947)
....... ...+......+.+++.+|++.+|++|||+.++.+.|+.
T Consensus 222 ~~~~~~~-----------~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 222 RRILKSK-----------PPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred HHHHccC-----------CCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 1111110 11122233567889999999999999999988887765
No 366
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.98 E-value=1.8e-31 Score=290.11 Aligned_cols=255 Identities=23% Similarity=0.290 Sum_probs=194.9
Q ss_pred ccCCcccccccCceeEEEEEe----CCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-ccccc
Q 002250 630 AVKPENLIGKGGSGNVYKVVL----NSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-RHVNV 704 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~ni 704 (947)
.|++.+.||+|+||.||+|.. .+|+.||+|++.... ........+.+.+|+.+++++ +|+||
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~-------------~~~~~~~~~~~~~e~~~l~~l~~~~~i 67 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKAT-------------IVQKAKTTEHTRTERQVLEHIRQSPFL 67 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhh-------------hhhcchHHHHHHHHHHHHHhcccCCCh
Confidence 367788999999999999985 368999999984211 011123346678899999999 59999
Q ss_pred ceEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCC
Q 002250 705 VKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEW 784 (947)
Q Consensus 705 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~ 784 (947)
+++++++..+...++||||+++++|.+++... ..+++.....++.|++.||+||| +.+++||||+|+||+++.++
T Consensus 68 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~ 142 (290)
T cd05613 68 VTLHYAFQTDTKLHLILDYINGGELFTHLSQR--ERFKEQEVQIYSGEIVLALEHLH---KLGIIYRDIKLENILLDSNG 142 (290)
T ss_pred hceeeEeecCCeEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEECCCC
Confidence 99999999999999999999999999999864 35788888889999999999999 89999999999999999999
Q ss_pred CeEEeccccceecccCCCCcceecccccccccCccccccC--CCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHH
Q 002250 785 KPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTC--KINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNW 862 (947)
Q Consensus 785 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~ 862 (947)
.++|+|||++......... ......|+..|+|||.+... .++.++||||||+++|||++|+.||.... .......+
T Consensus 143 ~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~-~~~~~~~~ 220 (290)
T cd05613 143 HVVLTDFGLSKEFHEDEVE-RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDG-EKNSQAEI 220 (290)
T ss_pred CEEEeeCccceeccccccc-ccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCC-ccccHHHH
Confidence 9999999999765433221 12234588999999998753 46789999999999999999999985321 11122222
Q ss_pred HHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 002250 863 VYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRP-----SMRVVVQ 915 (947)
Q Consensus 863 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~ev~~ 915 (947)
........ .+.+......+.+++.+|++.||++|| ++.++.+
T Consensus 221 ~~~~~~~~-----------~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 221 SRRILKSE-----------PPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred HHHhhccC-----------CCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 21111111 111223345678899999999999997 5566554
No 367
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=4.1e-33 Score=276.91 Aligned_cols=244 Identities=25% Similarity=0.314 Sum_probs=193.4
Q ss_pred hhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccce
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVK 706 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 706 (947)
.++|...+.+|+|.||.|-.++-+ +|+.+|+|+++......+ .+...-..|-++++..+||.+..
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiak--------------dEVAHTlTE~RVL~~~~HPFLt~ 232 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAK--------------DEVAHTLTENRVLQNCRHPFLTS 232 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeeh--------------HHhhhhhhHHHHHHhccCcHHHH
Confidence 467888999999999999999965 799999999854332111 22334457889999999999999
Q ss_pred EEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCe
Q 002250 707 LYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKP 786 (947)
Q Consensus 707 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 786 (947)
+.-.|+..+..|+||||+.||.|.-++.+. ..+++....-.-..|+.||.||| +++||.||+|.+|.|+|.||.+
T Consensus 233 LKYsFQt~drlCFVMeyanGGeLf~HLsre--r~FsE~RtRFYGaEIvsAL~YLH---s~~ivYRDlKLENLlLDkDGHI 307 (516)
T KOG0690|consen 233 LKYSFQTQDRLCFVMEYANGGELFFHLSRE--RVFSEDRTRFYGAEIVSALGYLH---SRNIVYRDLKLENLLLDKDGHI 307 (516)
T ss_pred hhhhhccCceEEEEEEEccCceEeeehhhh--hcccchhhhhhhHHHHHHhhhhh---hCCeeeeechhhhheeccCCce
Confidence 988999999999999999999998888764 44666666667788999999999 8999999999999999999999
Q ss_pred EEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 002250 787 RIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSK 866 (947)
Q Consensus 787 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 866 (947)
||+|||+++.--. ....+..++|||.|.|||++....|+.++|.|.+||++|||++|+.||... +...+.+.+.
T Consensus 308 KitDFGLCKE~I~--~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~--dh~kLFeLIl-- 381 (516)
T KOG0690|consen 308 KITDFGLCKEEIK--YGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNK--DHEKLFELIL-- 381 (516)
T ss_pred Eeeecccchhccc--ccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCccccc--chhHHHHHHH--
Confidence 9999999974332 233455789999999999999999999999999999999999999999532 2222222211
Q ss_pred ccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCC
Q 002250 867 MDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRP 908 (947)
Q Consensus 867 ~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP 908 (947)
+.|-+ +++....+...+....+.+||.+|.
T Consensus 382 ---------~ed~k---FPr~ls~eAktLLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 382 ---------MEDLK---FPRTLSPEAKTLLSGLLKKDPKKRL 411 (516)
T ss_pred ---------hhhcc---CCccCCHHHHHHHHHHhhcChHhhc
Confidence 11112 2333334455666688999999995
No 368
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.98 E-value=3.7e-34 Score=277.61 Aligned_cols=251 Identities=28% Similarity=0.365 Sum_probs=192.4
Q ss_pred cCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-cccccceEE
Q 002250 631 VKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-RHVNVVKLY 708 (947)
Q Consensus 631 ~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~ 708 (947)
.+....||.|+||+|+|..++ .|+..|||+++... ...+.+++..|.++..+- +.||||++|
T Consensus 66 Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n----------------~~keq~rll~e~d~~mks~~cp~IVkfy 129 (361)
T KOG1006|consen 66 LQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNN----------------IEKEQKRLLMEHDTVMKSSNCPNIVKFY 129 (361)
T ss_pred HHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeecc----------------chHHHHHHHHHHHHHHhhcCCcHHHHHh
Confidence 344567999999999999865 79999999994221 134567788888887666 689999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhh---hcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCC
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLH---TCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWK 785 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~---~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~ 785 (947)
|.+-.++..|+.||.| ..++..+.+ ......+++...-.|+...+.||+||.+ ...|||||+||+|||++..|.
T Consensus 130 Ga~F~EGdcWiCMELM-d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~--~lkiIHRDvKPSNILldr~G~ 206 (361)
T KOG1006|consen 130 GALFSEGDCWICMELM-DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKE--ELKIIHRDVKPSNILLDRHGD 206 (361)
T ss_pred hhhhcCCceeeeHHHH-hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHH--HhhhhhccCChhheEEecCCC
Confidence 9999999999999999 456655443 2234567888887888888999999996 679999999999999999999
Q ss_pred eEEeccccceecccCCCCcceecccccccccCcccccc--CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHH
Q 002250 786 PRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYT--CKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWV 863 (947)
Q Consensus 786 ~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~ 863 (947)
+||||||++..+...- ..+.-+|-..|||||.+.. ..|+-+|||||+|+++||+.||..|+. ...+..+.+
T Consensus 207 vKLCDFGIcGqLv~Si---AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr----~w~svfeql 279 (361)
T KOG1006|consen 207 VKLCDFGICGQLVDSI---AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYR----KWDSVFEQL 279 (361)
T ss_pred EeeecccchHhHHHHH---HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcc----hHHHHHHHH
Confidence 9999999997654332 2334568889999999853 348999999999999999999999984 222233333
Q ss_pred HhhccccccccccccCCCCcc---CHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 864 YSKMDSRDSMLTVVDPNISEI---LKEDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 864 ~~~~~~~~~~~~~~d~~~~~~---~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
.....+ |+.+-.. ..+....+.+++--|+.+|-..||...++.+
T Consensus 280 ~~Vv~g--------dpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 280 CQVVIG--------DPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred HHHHcC--------CCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 222222 2222111 2235567889999999999999999988765
No 369
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.98 E-value=8.6e-32 Score=287.77 Aligned_cols=254 Identities=22% Similarity=0.301 Sum_probs=197.2
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
+|.+.+.||+|+||.||+|... .+..+++|.+..... ..........+.+|+.++++++||||++++
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~ 68 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPV------------GELNPNETVQANQEAQLLSKLDHPAIVKFH 68 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccc------------cccCcchHHHHHHHHHHHHhCCCCcHHHHH
Confidence 4778899999999999999865 455677776632111 011112334577899999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhc--CCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCe
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTC--HKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKP 786 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 786 (947)
+++.++...++||||+++++|.+++... ....+++..++.++.|++.|++||| +.+++|+||+|+||++++ +.+
T Consensus 69 ~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~~l~~~nili~~-~~~ 144 (260)
T cd08222 69 ASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMH---QRRILHRDLKAKNIFLKN-NLL 144 (260)
T ss_pred HHHhcCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHH---HcCccccCCChhheEeec-CCE
Confidence 9999999999999999999999998753 3456899999999999999999999 899999999999999975 569
Q ss_pred EEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 002250 787 RIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSK 866 (947)
Q Consensus 787 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 866 (947)
+|+|||.+........ ......|++.|+|||......++.++|+||||+++|+|++|..||... .........
T Consensus 145 ~l~d~g~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~-----~~~~~~~~~ 217 (260)
T cd08222 145 KIGDFGVSRLLMGSCD--LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQ-----NFLSVVLRI 217 (260)
T ss_pred eecccCceeecCCCcc--cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCc-----cHHHHHHHH
Confidence 9999999976543322 122345788999999998888899999999999999999999998421 222222221
Q ss_pred ccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 867 MDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 867 ~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
.. ...+..+......+.+++.+|++.+|++||++.|+++.
T Consensus 218 ~~----------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 218 VE----------GPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred Hc----------CCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 11 11122234455678899999999999999999999864
No 370
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.97 E-value=7.4e-32 Score=291.68 Aligned_cols=251 Identities=24% Similarity=0.329 Sum_probs=200.4
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcc-ccccceE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVR-HVNVVKL 707 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l 707 (947)
+|.+.+.||+|+||.||+|... +++.||+|++.... .........+.+|++++++++ ||||+++
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~--------------~~~~~~~~~~~~e~~~~~~l~~~~~i~~~ 67 (280)
T cd05581 2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQ--------------LIKEKKVKYVKIEKEVLTRLNGHPGIIKL 67 (280)
T ss_pred CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHh--------------ccchHHHHHHHHHHHHHHhcccCCCchhH
Confidence 6788899999999999999965 79999999884211 111233467889999999998 9999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
++++..++..++||||+++++|.+++.+.+ .+++.....++.|++.||+||| +.+++|+||+|+||+++.++.++
T Consensus 68 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~ql~~~l~~Lh---~~~~~H~dl~~~ni~i~~~~~~~ 142 (280)
T cd05581 68 YYTFQDEENLYFVLEYAPNGELLQYIRKYG--SLDEKCTRFYAAEILLALEYLH---SKGIIHRDLKPENILLDKDMHIK 142 (280)
T ss_pred HHHhcCCceEEEEEcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEE
Confidence 999999999999999999999999998743 6899999999999999999999 89999999999999999999999
Q ss_pred EeccccceecccCCCC------------------cceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCC
Q 002250 788 IADFGLAKIVQTGEAG------------------DLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPI 849 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~ 849 (947)
++|||++......... .......++..|+|||+.....++.++||||+|++++|+++|..||
T Consensus 143 l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~ 222 (280)
T cd05581 143 ITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPF 222 (280)
T ss_pred ecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCC
Confidence 9999999765443211 1222345788999999998888999999999999999999999998
Q ss_pred CCCCCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCH----HHHHH
Q 002250 850 VPEFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSM----RVVVQ 915 (947)
Q Consensus 850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~----~ev~~ 915 (947)
.... ............ ...+...+..+.+++.+|++.+|++||++ .++++
T Consensus 223 ~~~~-----~~~~~~~~~~~~-----------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 223 RGSN-----EYLTFQKILKLE-----------YSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred CCcc-----HHHHHHHHHhcC-----------CCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 5331 111111111111 11122235668899999999999999999 66654
No 371
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.97 E-value=1.3e-31 Score=297.06 Aligned_cols=271 Identities=22% Similarity=0.263 Sum_probs=203.2
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
+|++.+.||+|++|.||+|+.. +++.||||++.... ......+.+.+|+.+++.++||||++++
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~---------------~~~~~~~~~~~e~~~l~~l~~~~i~~~~ 65 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVF---------------DDLIDAKRILREIKLLRHLRHENIIGLL 65 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeecccc---------------ccchhhhhHHHHHHHHHhcCCcchhhhh
Confidence 4778899999999999999965 58999999884211 1123446788999999999999999999
Q ss_pred EEEecCC-----ccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCC
Q 002250 709 CSITSED-----SNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLE 783 (947)
Q Consensus 709 ~~~~~~~-----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~ 783 (947)
+++.... ..|+||||++ ++|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.+
T Consensus 66 ~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~--~~l~~~~~~~i~~~l~~~l~~LH---~~gi~H~dlkp~nili~~~ 139 (330)
T cd07834 66 DILRPPSPEDFNDVYIVTELME-TDLHKVIKSP--QPLTDDHIQYFLYQILRGLKYLH---SANVIHRDLKPSNILVNSN 139 (330)
T ss_pred hhhcccCcccccceEEEecchh-hhHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCC
Confidence 9988775 7899999997 5898888763 37899999999999999999999 8999999999999999999
Q ss_pred CCeEEeccccceecccCCCC-cceecccccccccCccccccC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHH
Q 002250 784 WKPRIADFGLAKIVQTGEAG-DLTHVIAGTHGYIAPEYAYTC-KINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVN 861 (947)
Q Consensus 784 ~~~kl~DfG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~ 861 (947)
+.++|+|||++......... .......++..|+|||++.+. .++.++|+||||+++|||++|+.||..... .....
T Consensus 140 ~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~--~~~~~ 217 (330)
T cd07834 140 CDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDY--IDQLN 217 (330)
T ss_pred CCEEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCH--HHHHH
Confidence 99999999999876544310 112234578899999999887 789999999999999999999999854321 01011
Q ss_pred HHHhhccccc----------ccccccc-------CCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH--hhccCC
Q 002250 862 WVYSKMDSRD----------SMLTVVD-------PNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM--LEEAEP 922 (947)
Q Consensus 862 ~~~~~~~~~~----------~~~~~~d-------~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~--L~~~~~ 922 (947)
.......... .....+. ..........+..+.+++.+||+.+|++|||+.+++++ +++...
T Consensus 218 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~ 297 (330)
T cd07834 218 LIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHD 297 (330)
T ss_pred HHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcc
Confidence 1000000000 0000000 00011122245678899999999999999999999975 655554
Q ss_pred C
Q 002250 923 C 923 (947)
Q Consensus 923 ~ 923 (947)
.
T Consensus 298 ~ 298 (330)
T cd07834 298 P 298 (330)
T ss_pred c
Confidence 4
No 372
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.97 E-value=1.8e-31 Score=296.78 Aligned_cols=267 Identities=19% Similarity=0.234 Sum_probs=194.0
Q ss_pred hhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccce
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVK 706 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 706 (947)
.++|...+.||+|+||.||+|... +|+.||||++.... ........+.+|+.++++++||||++
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~---------------~~~~~~~~~~~e~~~l~~l~h~niv~ 78 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPF---------------QSEIFAKRAYRELTLLKHMQHENVIG 78 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCcc---------------ccccchhHHHHHHHHHHhcCCCCccc
Confidence 367888999999999999999954 68999999884211 01122346788999999999999999
Q ss_pred EEEEEecCC------ccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEe
Q 002250 707 LYCSITSED------SNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILL 780 (947)
Q Consensus 707 l~~~~~~~~------~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll 780 (947)
+++++.... ..++|+||+. .++.++.. ..+++..+..++.|++.||+||| +.+++||||||+||++
T Consensus 79 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dlkp~NIll 150 (342)
T cd07879 79 LLDVFTSAVSGDEFQDFYLVMPYMQ-TDLQKIMG----HPLSEDKVQYLVYQMLCGLKYIH---SAGIIHRDLKPGNLAV 150 (342)
T ss_pred hhheecccccCCCCceEEEEecccc-cCHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEE
Confidence 999987543 3589999995 46766553 35788999999999999999999 8899999999999999
Q ss_pred cCCCCeEEeccccceecccCCCCcceecccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccH
Q 002250 781 DLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYT-CKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDI 859 (947)
Q Consensus 781 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~ 859 (947)
+.++.++|+|||+++...... ....++..|+|||++.+ ..++.++|||||||++|||++|+.||..... ...+
T Consensus 151 ~~~~~~kL~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~-~~~~ 224 (342)
T cd07879 151 NEDCELKILDFGLARHADAEM-----TGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY-LDQL 224 (342)
T ss_pred CCCCCEEEeeCCCCcCCCCCC-----CCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCH-HHHH
Confidence 999999999999987543221 23357889999999876 4588899999999999999999999953211 0001
Q ss_pred HHHHHhhccccccc----------------cccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH--hhccC
Q 002250 860 VNWVYSKMDSRDSM----------------LTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM--LEEAE 921 (947)
Q Consensus 860 ~~~~~~~~~~~~~~----------------~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~--L~~~~ 921 (947)
.............+ .......+..........+.+++.+|++.||++||++.+++++ ++..+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~ 304 (342)
T cd07879 225 TQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR 304 (342)
T ss_pred HHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence 00000000000000 0000000011111234567899999999999999999999955 66655
Q ss_pred CC
Q 002250 922 PC 923 (947)
Q Consensus 922 ~~ 923 (947)
+.
T Consensus 305 ~~ 306 (342)
T cd07879 305 DA 306 (342)
T ss_pred cc
Confidence 43
No 373
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.97 E-value=2.3e-31 Score=288.14 Aligned_cols=261 Identities=24% Similarity=0.298 Sum_probs=196.7
Q ss_pred cCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEE
Q 002250 631 VKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYC 709 (947)
Q Consensus 631 ~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 709 (947)
|+..+.||+|++|.||+|+.. +++.||+|++.... ......+.+..|+.++++++|+|++++++
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~---------------~~~~~~~~~~~e~~~l~~~~~~~i~~~~~ 65 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDN---------------EEEGIPSTALREISLLKELKHPNIVKLLD 65 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEecccc---------------ccccccHHHHHHHHHHHhcCCCCHHHHHh
Confidence 456788999999999999965 59999999984221 11233466788999999999999999999
Q ss_pred EEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEe
Q 002250 710 SITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIA 789 (947)
Q Consensus 710 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 789 (947)
++...+..++||||++ ++|.+++.... ..+++..+..++.|++.|++||| +.+|+||||+|+||++++++.++|+
T Consensus 66 ~~~~~~~~~~v~e~~~-~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~~l~~~ni~~~~~~~~~l~ 140 (282)
T cd07829 66 VIHTERKLYLVFEYCD-MDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCH---SHRILHRDLKPQNILINRDGVLKLA 140 (282)
T ss_pred hhhcCCceEEEecCcC-cCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChheEEEcCCCCEEEe
Confidence 9999999999999997 58999998742 46899999999999999999999 8899999999999999999999999
Q ss_pred ccccceecccCCCCcceecccccccccCccccccC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcc
Q 002250 790 DFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTC-KINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMD 868 (947)
Q Consensus 790 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 868 (947)
|||.++....... ......++..|+|||.+.+. .++.++||||||+++|||++|+.||..... ............
T Consensus 141 d~g~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~--~~~~~~~~~~~~ 216 (282)
T cd07829 141 DFGLARAFGIPLR--TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSE--IDQLFKIFQILG 216 (282)
T ss_pred cCCcccccCCCcc--ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccH--HHHHHHHHHHhC
Confidence 9999976543321 11223457789999998776 788999999999999999999999854321 001111100000
Q ss_pred -----------cc----ccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 869 -----------SR----DSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 869 -----------~~----~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
.. .....................+.+++.+|+..+|++||++.+++.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 217 TPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred CCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 00 000000000000111122557899999999999999999999986
No 374
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.97 E-value=1.5e-31 Score=297.42 Aligned_cols=261 Identities=19% Similarity=0.256 Sum_probs=193.8
Q ss_pred HhhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccc
Q 002250 627 IIDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVV 705 (947)
Q Consensus 627 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 705 (947)
+.++|++.+.||+|+||.||+|... +++.||||++.... ........+.+|+.++++++||||+
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---------------~~~~~~~~~~~E~~~l~~l~h~~iv 77 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF---------------QSELFAKRAYRELRLLKHMKHENVI 77 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccc---------------cchHHHHHHHHHHHHHHhcCCCCcc
Confidence 4578999999999999999999854 79999999884211 0112234677899999999999999
Q ss_pred eEEEEEecCC------ccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeE
Q 002250 706 KLYCSITSED------SNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNIL 779 (947)
Q Consensus 706 ~l~~~~~~~~------~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIl 779 (947)
++++++..+. ..++||||+ +++|.+++.. ..+++..+..++.|++.|++||| +.+|+||||||+||+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~al~~LH---~~gi~H~dlkp~Nil 150 (343)
T cd07880 78 GLLDVFTPDLSLDRFHDFYLVMPFM-GTDLGKLMKH---EKLSEDRIQFLVYQMLKGLKYIH---AAGIIHRDLKPGNLA 150 (343)
T ss_pred ceeeeecCCccccccceEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEE
Confidence 9999987654 348999999 7799888864 35889999999999999999999 899999999999999
Q ss_pred ecCCCCeEEeccccceecccCCCCcceecccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCccc
Q 002250 780 LDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYT-CKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKD 858 (947)
Q Consensus 780 l~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~ 858 (947)
++.++.++++|||++....... ....+++.|+|||++.+ ..++.++|+||+|+++|++++|+.||..... ...
T Consensus 151 l~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~-~~~ 224 (343)
T cd07880 151 VNEDCELKILDFGLARQTDSEM-----TGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDH-LDQ 224 (343)
T ss_pred EcCCCCEEEeecccccccccCc-----cccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHH
Confidence 9999999999999997553321 23357889999999876 4578899999999999999999999853211 000
Q ss_pred HHHHHHhhcccccc----------------ccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 859 IVNWVYSKMDSRDS----------------MLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 859 ~~~~~~~~~~~~~~----------------~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
.............. ........+..........+.+++.+|++.||++|||+.++++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 225 LMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred HHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00100000000000 0000000111112233456889999999999999999999993
No 375
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.97 E-value=3.2e-31 Score=294.39 Aligned_cols=277 Identities=20% Similarity=0.202 Sum_probs=196.5
Q ss_pred hhccCC-cccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccc
Q 002250 628 IDAVKP-ENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVV 705 (947)
Q Consensus 628 ~~~~~~-~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 705 (947)
.++|.. .+.||+|+||+||+|... +++.||||++......... .. .............+.+|+++++.++||||+
T Consensus 7 ~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 83 (335)
T PTZ00024 7 SERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDV--TK-DRQLVGMCGIHFTTLRELKIMNEIKHENIM 83 (335)
T ss_pred ccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeecccccccc--cc-chhhhcccccchhHHHHHHHHHhCCCccee
Confidence 356654 577999999999999965 6899999998432211100 00 000000011123577899999999999999
Q ss_pred eEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCC
Q 002250 706 KLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWK 785 (947)
Q Consensus 706 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~ 785 (947)
++++++..++..++||||++ |+|.+++... ..+++.....++.|++.||+||| +.+++||||+|+||+++.++.
T Consensus 84 ~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH---~~~i~H~dl~~~nill~~~~~ 157 (335)
T PTZ00024 84 GLVDVYVEGDFINLVMDIMA-SDLKKVVDRK--IRLTESQVKCILLQILNGLNVLH---KWYFMHRDLSPANIFINSKGI 157 (335)
T ss_pred eeeEEEecCCcEEEEEeccc-cCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHeEECCCCC
Confidence 99999999999999999996 6899998753 45788899999999999999999 899999999999999999999
Q ss_pred eEEeccccceecccCCC------------CcceecccccccccCccccccCC-CCCccchHHHHHHHHHHHhCCCCCCCC
Q 002250 786 PRIADFGLAKIVQTGEA------------GDLTHVIAGTHGYIAPEYAYTCK-INEKSDVYSFGVVLMELVTGKRPIVPE 852 (947)
Q Consensus 786 ~kl~DfG~a~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slGv~l~elltg~~p~~~~ 852 (947)
++|+|||.+........ ........++..|+|||++.+.. ++.++||||+||++|||++|+.||...
T Consensus 158 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~ 237 (335)
T PTZ00024 158 CKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGE 237 (335)
T ss_pred EEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999976541110 01111234678899999987643 688999999999999999999998533
Q ss_pred CCCcccHHHHHHhhcccccc--cc------------ccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 853 FGDSKDIVNWVYSKMDSRDS--ML------------TVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 853 ~~~~~~~~~~~~~~~~~~~~--~~------------~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
.. .+....+......... +. ....+............+.+++.+|++.+|++|||+.|++.
T Consensus 238 ~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 238 NE--IDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred CH--HHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 21 1111111111100000 00 00001111112223456889999999999999999999996
No 376
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.1e-32 Score=312.74 Aligned_cols=255 Identities=22% Similarity=0.314 Sum_probs=198.6
Q ss_pred hhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccce
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVK 706 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 706 (947)
.++|.+.+.||+|+||.|..++.+ +++.+|+|++... ... ...+..-|..|-.+|..-+.+=|+.
T Consensus 74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~------------eMl--Kr~~tA~F~EERDimv~~ns~Wiv~ 139 (1317)
T KOG0612|consen 74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKW------------EML--KRAETACFREERDIMVFGNSEWIVQ 139 (1317)
T ss_pred HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHH------------HHh--hchhHHHHHHHhHHHHcCCcHHHHH
Confidence 377999999999999999999976 6888999998321 111 2244567899999999999999999
Q ss_pred EEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCe
Q 002250 707 LYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKP 786 (947)
Q Consensus 707 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 786 (947)
+.-.|+++.+.|+|||||+||+|...+.+....+.+|+.. ++..|+-||+-+| +.|+|||||||+|||+|..|.+
T Consensus 140 LhyAFQD~~~LYlVMdY~pGGDlltLlSk~~~~pE~~ArF--Y~aEiVlAldslH---~mgyVHRDiKPDNvLld~~GHi 214 (1317)
T KOG0612|consen 140 LHYAFQDERYLYLVMDYMPGGDLLTLLSKFDRLPEDWARF--YTAEIVLALDSLH---SMGYVHRDIKPDNVLLDKSGHI 214 (1317)
T ss_pred HHHHhcCccceEEEEecccCchHHHHHhhcCCChHHHHHH--HHHHHHHHHHHHH---hccceeccCCcceeEecccCcE
Confidence 9999999999999999999999999999876545555544 6667889999999 8999999999999999999999
Q ss_pred EEeccccceecccCCCCcceecccccccccCccccc----c-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHH
Q 002250 787 RIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAY----T-CKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVN 861 (947)
Q Consensus 787 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~ 861 (947)
||+|||.+-.+..++. ......+|||-|++||++. + +.|+..+|.||+||++|||+.|..||+ .+.+++
T Consensus 215 kLADFGsClkm~~dG~-V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFY-----adslve 288 (1317)
T KOG0612|consen 215 KLADFGSCLKMDADGT-VRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFY-----ADSLVE 288 (1317)
T ss_pred eeccchhHHhcCCCCc-EEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcch-----HHHHHH
Confidence 9999999876654443 3345678999999999985 2 679999999999999999999999994 456666
Q ss_pred HHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCC---HHHHHH
Q 002250 862 WVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPS---MRVVVQ 915 (947)
Q Consensus 862 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt---~~ev~~ 915 (947)
.....+.....+...-+ .+..+...++|.+.+ -+|+.|.. +.++..
T Consensus 289 TY~KIm~hk~~l~FP~~-------~~VSeeakdLI~~ll-~~~e~RLgrngiedik~ 337 (1317)
T KOG0612|consen 289 TYGKIMNHKESLSFPDE-------TDVSEEAKDLIEALL-CDREVRLGRNGIEDIKN 337 (1317)
T ss_pred HHHHHhchhhhcCCCcc-------cccCHHHHHHHHHHh-cChhhhcccccHHHHHh
Confidence 65555544333211111 123344455555544 36778877 666654
No 377
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.97 E-value=3.8e-31 Score=294.50 Aligned_cols=263 Identities=20% Similarity=0.246 Sum_probs=193.3
Q ss_pred HHhhccCCcccccccCceeEEEEEe-CCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcccccc
Q 002250 626 EIIDAVKPENLIGKGGSGNVYKVVL-NSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNV 704 (947)
Q Consensus 626 ~~~~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 704 (947)
.+.++|.+.+.||+|+||.||+|.. .+++.||||++.... ........+.+|+.++++++||||
T Consensus 14 ~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~---------------~~~~~~~~~~~Ei~~l~~l~h~~i 78 (345)
T cd07877 14 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---------------QSIIHAKRTYRELRLLKHMKHENV 78 (345)
T ss_pred hccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcc---------------hhhHHHHHHHHHHHHHHHcCCCcc
Confidence 4457899999999999999999985 478999999884211 011223567789999999999999
Q ss_pred ceEEEEEecC------CccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCe
Q 002250 705 VKLYCSITSE------DSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNI 778 (947)
Q Consensus 705 v~l~~~~~~~------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NI 778 (947)
+++++++... ...+++++++ +++|.+++.. ..+++..+..++.|+++|++||| +.+|+||||||+||
T Consensus 79 v~~~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NI 151 (345)
T cd07877 79 IGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNL 151 (345)
T ss_pred cceeeeeeecccccccccEEEEehhc-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHE
Confidence 9999988643 3367888887 8899888864 35889999999999999999999 89999999999999
Q ss_pred EecCCCCeEEeccccceecccCCCCcceecccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcc
Q 002250 779 LLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYT-CKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSK 857 (947)
Q Consensus 779 ll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~ 857 (947)
+++.++.++|+|||+++..... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||..... ..
T Consensus 152 ll~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~-~~ 225 (345)
T cd07877 152 AVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH-ID 225 (345)
T ss_pred EEcCCCCEEEeccccccccccc-----ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HH
Confidence 9999999999999998754322 123457889999998866 4578899999999999999999999843211 11
Q ss_pred cHHHHHHhhcccccccc----------------ccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 858 DIVNWVYSKMDSRDSML----------------TVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 858 ~~~~~~~~~~~~~~~~~----------------~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
.+.............+. ........+........+.+++.+|++.||.+||++.+++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 226 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred HHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 11111000000000000 000000111111234567899999999999999999999864
No 378
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.97 E-value=4.8e-31 Score=291.28 Aligned_cols=262 Identities=23% Similarity=0.268 Sum_probs=194.0
Q ss_pred HhhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccc
Q 002250 627 IIDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVV 705 (947)
Q Consensus 627 ~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 705 (947)
+.++|++.+.||+|+||.||+|... +++.||||++.... ......+.+.+|++++++++||||+
T Consensus 8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~---------------~~~~~~~~~~~E~~~l~~l~hpniv 72 (328)
T cd07856 8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPF---------------STPVLAKRTYRELKLLKHLRHENII 72 (328)
T ss_pred cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccc---------------cccchhHHHHHHHHHHHhcCCCCee
Confidence 4678999999999999999999855 79999999873211 1112345677899999999999999
Q ss_pred eEEEEEec-CCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCC
Q 002250 706 KLYCSITS-EDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEW 784 (947)
Q Consensus 706 ~l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~ 784 (947)
++++++.. ....++|+||+ +++|.++++. ..+++.....++.|+++||+||| +.+|+||||+|+||++++++
T Consensus 73 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~---~~~~~~~~~~~~~ql~~aL~~LH---~~~iiH~dl~p~Nili~~~~ 145 (328)
T cd07856 73 SLSDIFISPLEDIYFVTELL-GTDLHRLLTS---RPLEKQFIQYFLYQILRGLKYVH---SAGVVHRDLKPSNILINENC 145 (328)
T ss_pred eEeeeEecCCCcEEEEeehh-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEeECCCC
Confidence 99999876 55788999998 6689888864 34678888889999999999999 89999999999999999999
Q ss_pred CeEEeccccceecccCCCCcceecccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHH---
Q 002250 785 KPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYT-CKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIV--- 860 (947)
Q Consensus 785 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~--- 860 (947)
.++|+|||.+....... ....++..|+|||.+.+ ..++.++||||||+++|||++|+.||..... .....
T Consensus 146 ~~~l~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~-~~~~~~~~ 219 (328)
T cd07856 146 DLKICDFGLARIQDPQM-----TGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDH-VNQFSIIT 219 (328)
T ss_pred CEEeCccccccccCCCc-----CCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHH
Confidence 99999999987543221 12356889999998766 4688999999999999999999999853211 00000
Q ss_pred --------HHHHhhccccc--cccccccC---CCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 861 --------NWVYSKMDSRD--SMLTVVDP---NISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 861 --------~~~~~~~~~~~--~~~~~~d~---~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
++......... ........ ...+........+.+++.+|++.+|++|||+.+++..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 220 DLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred HHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000000000 00000000 0011111234678899999999999999999999865
No 379
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=4e-32 Score=285.40 Aligned_cols=245 Identities=24% Similarity=0.362 Sum_probs=194.2
Q ss_pred cccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEEEEe
Q 002250 634 ENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYCSIT 712 (947)
Q Consensus 634 ~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 712 (947)
.+.+|.|.||+||-|+.+ +|+.||||++.+ ..........+++|++|++++.||.||.+...|+
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdK---------------lrFp~kqesqlR~EVaILq~l~HPGiV~le~M~E 633 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDK---------------LRFPTKQESQLRNEVAILQNLHHPGIVNLECMFE 633 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeec---------------ccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeec
Confidence 578999999999999955 899999999931 1122244578899999999999999999999999
Q ss_pred cCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCC---CCeEEe
Q 002250 713 SEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLE---WKPRIA 789 (947)
Q Consensus 713 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~ 789 (947)
..+..++|||-+ .|+..+++-..+...+++..-.-+..||+.||.||| -++|||+||||+|||+... ..+|||
T Consensus 634 T~ervFVVMEKl-~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH---~knIvHCDLKPENVLLas~~~FPQvKlC 709 (888)
T KOG4236|consen 634 TPERVFVVMEKL-HGDMLEMILSSEKGRLPERITKFLVTQILVALRYLH---FKNIVHCDLKPENVLLASASPFPQVKLC 709 (888)
T ss_pred CCceEEEEehhh-cchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhh---hcceeeccCCchheeeccCCCCCceeec
Confidence 999999999999 556666666556667888887888899999999999 8999999999999999754 569999
Q ss_pred ccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhccc
Q 002250 790 DFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDS 869 (947)
Q Consensus 790 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 869 (947)
|||+|++.+.... ...++||+.|.|||+++...|...-|+||.||++|--++|..||. .++++.+.+. .
T Consensus 710 DFGfARiIgEksF---RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFN----EdEdIndQIQ----N 778 (888)
T KOG4236|consen 710 DFGFARIIGEKSF---RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFN----EDEDINDQIQ----N 778 (888)
T ss_pred cccceeecchhhh---hhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCC----CccchhHHhh----c
Confidence 9999999876543 346789999999999999999999999999999999999999983 4455544332 1
Q ss_pred cccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 002250 870 RDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVV 914 (947)
Q Consensus 870 ~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~ 914 (947)
...| . .++-..+.....++++...++..=.+|-+..+-+
T Consensus 779 AaFM---y---Pp~PW~eis~~AidlIn~LLqVkm~kRysvdk~l 817 (888)
T KOG4236|consen 779 AAFM---Y---PPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSL 817 (888)
T ss_pred cccc---c---CCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhc
Confidence 1111 1 1222344455666777777777777777665543
No 380
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.97 E-value=1.9e-31 Score=296.69 Aligned_cols=263 Identities=21% Similarity=0.242 Sum_probs=189.8
Q ss_pred hhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccce
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVK 706 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 706 (947)
..+|.+.+.||+|+||.||+|... +++.||+|++... .......+.+|++++++++||||++
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~-----------------~~~~~~~~~~Ei~~l~~l~h~~i~~ 66 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLT-----------------DPQSVKHALREIKIIRRLDHDNIVK 66 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecC-----------------CCchHHHHHHHHHHHHhcCCCcchh
Confidence 367889999999999999999965 6899999988321 1133466888999999999999999
Q ss_pred EEEEEecC--------------CccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecc
Q 002250 707 LYCSITSE--------------DSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRD 772 (947)
Q Consensus 707 l~~~~~~~--------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~D 772 (947)
+++++... ...++||||++ ++|.+++.. ..+++.....++.|++.||+||| +.+|+|||
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH---~~givH~d 139 (342)
T cd07854 67 VYEVLGPSGSDLTEDVGSLTELNSVYIVQEYME-TDLANVLEQ---GPLSEEHARLFMYQLLRGLKYIH---SANVLHRD 139 (342)
T ss_pred hHhhhcccccccccccccccccceEEEEeeccc-ccHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCC
Confidence 99776553 34689999996 588888864 35788999999999999999999 88999999
Q ss_pred CCCCCeEec-CCCCeEEeccccceecccCCCCc-ceecccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCC
Q 002250 773 VKSSNILLD-LEWKPRIADFGLAKIVQTGEAGD-LTHVIAGTHGYIAPEYAYT-CKINEKSDVYSFGVVLMELVTGKRPI 849 (947)
Q Consensus 773 lkp~NIll~-~~~~~kl~DfG~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~ 849 (947)
|||+||+++ +++.++++|||.++......... ......++..|+|||++.. ..++.++|||||||++|||++|+.||
T Consensus 140 ikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf 219 (342)
T cd07854 140 LKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLF 219 (342)
T ss_pred CCHHHEEEcCCCceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCC
Confidence 999999997 45678999999997653321111 1122357889999998754 45788999999999999999999999
Q ss_pred CCCCCCcccHHHHHHhhcc-cc-----------cccc---ccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 002250 850 VPEFGDSKDIVNWVYSKMD-SR-----------DSML---TVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVV 914 (947)
Q Consensus 850 ~~~~~~~~~~~~~~~~~~~-~~-----------~~~~---~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~ 914 (947)
...... ............ .. .... .................+.+++.+|++.||++|||+.|++
T Consensus 220 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell 298 (342)
T cd07854 220 AGAHEL-EQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEAL 298 (342)
T ss_pred CCCCHH-HHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHh
Confidence 533110 000000000000 00 0000 0000000111122345688999999999999999999998
Q ss_pred H
Q 002250 915 Q 915 (947)
Q Consensus 915 ~ 915 (947)
+
T Consensus 299 ~ 299 (342)
T cd07854 299 M 299 (342)
T ss_pred C
Confidence 5
No 381
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.97 E-value=1.5e-31 Score=297.55 Aligned_cols=262 Identities=21% Similarity=0.293 Sum_probs=195.4
Q ss_pred HHhhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcccccc
Q 002250 626 EIIDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNV 704 (947)
Q Consensus 626 ~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 704 (947)
++.++|++.+.||+|++|.||+|+.. +++.||||++.... ........+.+|+.++++++|||+
T Consensus 12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~---------------~~~~~~~~~~~E~~~l~~l~h~~i 76 (343)
T cd07851 12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPF---------------QSAIHAKRTYRELRLLKHMDHENV 76 (343)
T ss_pred cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEeccccc---------------chhhHHHHHHHHHHHHHhccCCCH
Confidence 34578999999999999999999965 68899999873211 011233557789999999999999
Q ss_pred ceEEEEEecCCc------cEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCe
Q 002250 705 VKLYCSITSEDS------NLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNI 778 (947)
Q Consensus 705 v~l~~~~~~~~~------~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NI 778 (947)
+++.+++...+. .++|+||+ +++|.+++.. ..+++..+..++.|++.|++||| +.+|+||||+|+||
T Consensus 77 v~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Ni 149 (343)
T cd07851 77 IGLLDVFTPASSLEDFQDVYLVTHLM-GADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIH---SAGIIHRDLKPSNI 149 (343)
T ss_pred HHHHHHhhccccccccccEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHe
Confidence 999988876654 79999999 6799998875 45899999999999999999999 89999999999999
Q ss_pred EecCCCCeEEeccccceecccCCCCcceecccccccccCccccccC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCCcc
Q 002250 779 LLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTC-KINEKSDVYSFGVVLMELVTGKRPIVPEFGDSK 857 (947)
Q Consensus 779 ll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~ 857 (947)
++++++.++|+|||++...... .....++..|+|||.+.+. .++.++||||+|+++|||++|+.||..... .
T Consensus 150 ll~~~~~~kL~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~--~ 222 (343)
T cd07851 150 AVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDH--I 222 (343)
T ss_pred EECCCCCEEEcccccccccccc-----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh--H
Confidence 9999999999999999765332 1233578899999988653 578899999999999999999999853211 1
Q ss_pred cHHHHHHhhccc-cccc----------------cccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 858 DIVNWVYSKMDS-RDSM----------------LTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 858 ~~~~~~~~~~~~-~~~~----------------~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
............ ...+ .....+............+.+++.+|++.+|++|||+.|++++
T Consensus 223 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 223 DQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred HHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 111110000000 0000 0000000011111225678899999999999999999999863
No 382
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=6.7e-32 Score=268.10 Aligned_cols=259 Identities=23% Similarity=0.318 Sum_probs=191.5
Q ss_pred hccCC-cccccccCceeEEEEE-eCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-cccccc
Q 002250 629 DAVKP-ENLIGKGGSGNVYKVV-LNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-RHVNVV 705 (947)
Q Consensus 629 ~~~~~-~~~iG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv 705 (947)
+-|+. .+.||+|+||.|--+. ..+|.++|||++... ..-...+.-+|++++... .|+||+
T Consensus 77 d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq-----------------~gHsR~RvfREVe~f~~Cqgh~nil 139 (463)
T KOG0607|consen 77 DMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ-----------------PGHSRSRVFREVETFYQCQGHKNIL 139 (463)
T ss_pred HHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcC-----------------CchHHHHHHHHHHHHHHhcCCccHH
Confidence 44444 4679999999999888 778999999998311 112235677899999998 599999
Q ss_pred eEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCC-
Q 002250 706 KLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEW- 784 (947)
Q Consensus 706 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~- 784 (947)
.++++|++++..|+|||-|.||+|..++++. .-+++...-++..+||.||.||| .++|.|||+||+|||-.+..
T Consensus 140 qLiefFEdd~~FYLVfEKm~GGplLshI~~~--~~F~E~EAs~vvkdia~aLdFlH---~kgIAHRDlKPENiLC~~pn~ 214 (463)
T KOG0607|consen 140 QLIEFFEDDTRFYLVFEKMRGGPLLSHIQKR--KHFNEREASRVVKDIASALDFLH---TKGIAHRDLKPENILCESPNK 214 (463)
T ss_pred HHHHHhcccceEEEEEecccCchHHHHHHHh--hhccHHHHHHHHHHHHHHHHHHh---hcCcccccCCccceeecCCCC
Confidence 9999999999999999999999999999874 45888888899999999999999 89999999999999997543
Q ss_pred --CeEEeccccceecccC-----CCCcceecccccccccCccccc-----cCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 002250 785 --KPRIADFGLAKIVQTG-----EAGDLTHVIAGTHGYIAPEYAY-----TCKINEKSDVYSFGVVLMELVTGKRPIVPE 852 (947)
Q Consensus 785 --~~kl~DfG~a~~~~~~-----~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slGv~l~elltg~~p~~~~ 852 (947)
-+|||||.++.-.... .........+|+..|||||+.. ...|+.++|.||+|||+|-|++|.+||.+.
T Consensus 215 vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~ 294 (463)
T KOG0607|consen 215 VSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGH 294 (463)
T ss_pred cCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCc
Confidence 4899999987532211 1111122346888999999873 234889999999999999999999999765
Q ss_pred CCC-----cccHHHHHHhhccccccccccccCCCCccC----HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 853 FGD-----SKDIVNWVYSKMDSRDSMLTVVDPNISEIL----KEDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 853 ~~~-----~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~----~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
.+. .....+...... .+.+-...-+++ .....+..+++...+..|+.+|.++.+++.
T Consensus 295 Cg~dCGWdrGe~Cr~CQ~~L------FesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 295 CGADCGWDRGEVCRVCQNKL------FESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred cCCcCCccCCCccHHHHHHH------HHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 421 112222111111 111111111222 223344566777788899999999998886
No 383
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.97 E-value=1.1e-30 Score=277.50 Aligned_cols=239 Identities=28% Similarity=0.334 Sum_probs=191.7
Q ss_pred ccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEEEEecCC
Q 002250 637 IGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYCSITSED 715 (947)
Q Consensus 637 iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 715 (947)
||+|+||.||++... +++.+|+|++.... .........+..|+.++++++||||+++++.+..+.
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~--------------~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 66 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKK--------------IIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEE 66 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhh--------------hcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCC
Confidence 699999999999965 58999999884221 111124567889999999999999999999999999
Q ss_pred ccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEeccccce
Q 002250 716 SNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFGLAK 795 (947)
Q Consensus 716 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 795 (947)
..++||||+++++|.+++.... .+++.....++.|++.|+.|+| +.+++|+||+|+||+++.++.++|+|||.+.
T Consensus 67 ~~~~v~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lh---~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~ 141 (250)
T cd05123 67 KLYLVLEYAPGGELFSHLSKEG--RFSEERARFYAAEIVLALEYLH---SLGIIYRDLKPENILLDADGHIKLTDFGLAK 141 (250)
T ss_pred eeEEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcceEEEcCCCcEEEeecCcce
Confidence 9999999999999999998643 5789999999999999999999 8999999999999999999999999999997
Q ss_pred ecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhccccccccc
Q 002250 796 IVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDSRDSMLT 875 (947)
Q Consensus 796 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 875 (947)
...... .......++..|+|||...+...+.++|+||||+++||+++|+.||.... ............
T Consensus 142 ~~~~~~--~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~-----~~~~~~~~~~~~----- 209 (250)
T cd05123 142 ELSSEG--SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAED-----RKEIYEKILKDP----- 209 (250)
T ss_pred ecccCC--CcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHhcCC-----
Confidence 654432 11234567889999999988888899999999999999999999984321 112111111111
Q ss_pred cccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHH
Q 002250 876 VVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRV 912 (947)
Q Consensus 876 ~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~e 912 (947)
...+...+..+.+++.+|+..||++||++.+
T Consensus 210 ------~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 210 ------LRFPEFLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred ------CCCCCCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 1122222566788999999999999999954
No 384
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.97 E-value=6.7e-31 Score=314.42 Aligned_cols=149 Identities=30% Similarity=0.399 Sum_probs=129.9
Q ss_pred hhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccce
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVK 706 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 706 (947)
.++|.+.+.||+|+||+||+|... +++.||||++..... ........+.+|+.+++.++||||++
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~--------------~~~~~~~~~~~E~~~l~~l~hp~Iv~ 68 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADM--------------INKNMVHQVQAERDALALSKSPFIVH 68 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhc--------------cCHHHHHHHHHHHHHHHhcCCCCcCe
Confidence 367889999999999999999966 789999999842110 01122356889999999999999999
Q ss_pred EEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCe
Q 002250 707 LYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKP 786 (947)
Q Consensus 707 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 786 (947)
+++++......|+||||+++++|.+++.... .+++...+.++.||+.||+||| ..+|+||||||+|||++.++.+
T Consensus 69 ~~~~~~~~~~~~lVmEy~~g~~L~~li~~~~--~l~~~~~~~i~~qil~aL~yLH---~~gIiHrDLKP~NILl~~~g~v 143 (669)
T cd05610 69 LYYSLQSANNVYLVMEYLIGGDVKSLLHIYG--YFDEEMAVKYISEVALALDYLH---RHGIIHRDLKPDNMLISNEGHI 143 (669)
T ss_pred EEEEEEECCEEEEEEeCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCccHHHEEEcCCCCE
Confidence 9999999999999999999999999997643 4788888999999999999999 8899999999999999999999
Q ss_pred EEeccccce
Q 002250 787 RIADFGLAK 795 (947)
Q Consensus 787 kl~DfG~a~ 795 (947)
||+|||+++
T Consensus 144 kL~DFGls~ 152 (669)
T cd05610 144 KLTDFGLSK 152 (669)
T ss_pred EEEeCCCCc
Confidence 999999986
No 385
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.97 E-value=8.1e-31 Score=290.61 Aligned_cols=263 Identities=21% Similarity=0.223 Sum_probs=189.5
Q ss_pred ccCCcccccccCceeEEEEEeC-C--CcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-cccccc
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-S--GKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-RHVNVV 705 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv 705 (947)
+|++.+.||+|+||.||+|... + +..||||++... .......+.+.+|+.+++++ +||||+
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~---------------~~~~~~~~~~~~E~~~l~~l~~h~~iv 65 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNV---------------FSKKILAKRALRELKLLRHFRGHKNIT 65 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccc---------------cccchhHHHHHHHHHHHHHhcCCCChh
Confidence 3677889999999999999965 4 789999987311 01112245677899999999 599999
Q ss_pred eEEEEEecC----CccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEec
Q 002250 706 KLYCSITSE----DSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLD 781 (947)
Q Consensus 706 ~l~~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~ 781 (947)
++++.+... ...++++||+. ++|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH---~~givH~dlkp~Nili~ 139 (332)
T cd07857 66 CLYDMDIVFPGNFNELYLYEELME-ADLHQIIRSG--QPLTDAHFQSFIYQILCGLKYIH---SANVLHRDLKPGNLLVN 139 (332)
T ss_pred eeeeeeeeccccCCcEEEEEeccc-CCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHeEEc
Confidence 999875432 45688999985 6899988753 45889999999999999999999 89999999999999999
Q ss_pred CCCCeEEeccccceecccCCCC--cceecccccccccCcccccc-CCCCCccchHHHHHHHHHHHhCCCCCCCCCCCccc
Q 002250 782 LEWKPRIADFGLAKIVQTGEAG--DLTHVIAGTHGYIAPEYAYT-CKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKD 858 (947)
Q Consensus 782 ~~~~~kl~DfG~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~ 858 (947)
.++.++|+|||+++........ .......||..|+|||++.+ ..++.++||||+||++|||++|+.||..... .+
T Consensus 140 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~--~~ 217 (332)
T cd07857 140 ADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDY--VD 217 (332)
T ss_pred CCCCEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCH--HH
Confidence 9999999999999865433221 11223468999999998765 4588999999999999999999999853210 00
Q ss_pred HHHHHHhh------------ccccc-----cccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 859 IVNWVYSK------------MDSRD-----SMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 859 ~~~~~~~~------------~~~~~-----~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
........ ..... .........+..........+.+++.+|++.||++|||+.++++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 218 QLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred HHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 11000000 00000 00000000111111122456889999999999999999999874
No 386
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=5.1e-31 Score=294.97 Aligned_cols=251 Identities=25% Similarity=0.350 Sum_probs=206.0
Q ss_pred hhccCCcccccccCceeEEEEE-eCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-cccccc
Q 002250 628 IDAVKPENLIGKGGSGNVYKVV-LNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-RHVNVV 705 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv 705 (947)
.+.|++.+.||.|.+|.||+++ .++|+.+|||+..++ ....++++.|..|++.. .|||++
T Consensus 18 ~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~------------------~d~deEiE~eynil~~~~~hpnv~ 79 (953)
T KOG0587|consen 18 ADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPT------------------EDEEEEIELEYNMLKKYSHHPNVA 79 (953)
T ss_pred CCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCC------------------ccccHHHHHHHHHHHhccCCCCcc
Confidence 3678889999999999999999 557999999988533 24557788899999988 699999
Q ss_pred eEEEEEec-----CCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEe
Q 002250 706 KLYCSITS-----EDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILL 780 (947)
Q Consensus 706 ~l~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll 780 (947)
.++|+|.. ++..|+|||||.+|+..|+++......+.|..+.-|+..++.|+.+|| ...++|||||-.|||+
T Consensus 80 ~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH---~nkviHRDikG~NiLL 156 (953)
T KOG0587|consen 80 TFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLH---NNKVIHRDIKGQNVLL 156 (953)
T ss_pred eEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHh---hcceeeecccCceEEE
Confidence 99999854 567899999999999999999877788999999999999999999999 8999999999999999
Q ss_pred cCCCCeEEeccccceecccCCCCcceecccccccccCccccc-----cCCCCCccchHHHHHHHHHHHhCCCCCCCCCCC
Q 002250 781 DLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAY-----TCKINEKSDVYSFGVVLMELVTGKRPIVPEFGD 855 (947)
Q Consensus 781 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~ 855 (947)
+.++.+|++|||.+..+..... .....+||+.|||||++. ...|+.++|+||+|++..||..|.+|+.+..
T Consensus 157 T~e~~VKLvDFGvSaQldsT~g--rRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmH-- 232 (953)
T KOG0587|consen 157 TENAEVKLVDFGVSAQLDSTVG--RRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMH-- 232 (953)
T ss_pred eccCcEEEeeeeeeeeeecccc--cccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcc--
Confidence 9999999999999986654322 233467999999999984 3457889999999999999999999985432
Q ss_pred cccHHHHHHhhccccccccccccCCC-CccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 856 SKDIVNWVYSKMDSRDSMLTVVDPNI-SEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 856 ~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
-++.+....+ .|.. ..-+....+++.+++..|+.+|.++||++.++++
T Consensus 233 ---PmraLF~IpR---------NPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 233 ---PMRALFLIPR---------NPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred ---hhhhhccCCC---------CCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 1111111111 1111 2235677788999999999999999999998875
No 387
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.8e-31 Score=291.40 Aligned_cols=240 Identities=24% Similarity=0.281 Sum_probs=190.2
Q ss_pred hhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-cccccc
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-RHVNVV 705 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv 705 (947)
.+.|.....+|.|+|+.|-.+... +++..|||++... ...-.+|+.++... +||||+
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~---------------------~~~~~~e~~~~~~~~~h~niv 379 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR---------------------ADDNQDEIPISLLVRDHPNIV 379 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheecccc---------------------ccccccccchhhhhcCCCcce
Confidence 467778888999999999998854 7899999998311 23345677777666 799999
Q ss_pred eEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEe-cCCC
Q 002250 706 KLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILL-DLEW 784 (947)
Q Consensus 706 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll-~~~~ 784 (947)
++.+.+.++...|+|||++.++-+.+.+..... ....+..|+.+++.|+.||| +++|||||+||+|||+ ++.+
T Consensus 380 ~~~~v~~~~~~~~~v~e~l~g~ell~ri~~~~~---~~~e~~~w~~~lv~Av~~LH---~~gvvhRDLkp~NIL~~~~~g 453 (612)
T KOG0603|consen 380 KSHDVYEDGKEIYLVMELLDGGELLRRIRSKPE---FCSEASQWAAELVSAVDYLH---EQGVVHRDLKPGNILLDGSAG 453 (612)
T ss_pred eecceecCCceeeeeehhccccHHHHHHHhcch---hHHHHHHHHHHHHHHHHHHH---hcCeeecCCChhheeecCCCC
Confidence 999999999999999999999999888876432 22556679999999999999 8999999999999999 5889
Q ss_pred CeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHH
Q 002250 785 KPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVY 864 (947)
Q Consensus 785 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~ 864 (947)
+++|+|||.++...... ...+-|..|.|||++....|++++|+||||+++|||++|+.||...-.+ .++.
T Consensus 454 ~lrltyFG~a~~~~~~~-----~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-~ei~---- 523 (612)
T KOG0603|consen 454 HLRLTYFGFWSELERSC-----DTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-IEIH---- 523 (612)
T ss_pred cEEEEEechhhhCchhh-----cccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-HHHH----
Confidence 99999999998766541 1224588999999999999999999999999999999999999643222 1111
Q ss_pred hhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 865 SKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 865 ~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
..+. .+... ........+++.+|++.||.+||+|.++..+
T Consensus 524 ~~i~---------~~~~s---~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h 563 (612)
T KOG0603|consen 524 TRIQ---------MPKFS---ECVSDEAKDLLQQLLQVDPALRLGADEIGAH 563 (612)
T ss_pred Hhhc---------CCccc---cccCHHHHHHHHHhccCChhhCcChhhhccC
Confidence 1111 11222 3334456677779999999999999999864
No 388
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.97 E-value=7.3e-31 Score=239.65 Aligned_cols=265 Identities=22% Similarity=0.282 Sum_probs=197.3
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
.|.-.++||+|.||+||||+.. +++.||+|+++-+. ..+.-.....+|+-+++.++|+|||+++
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrldd---------------ddegvpssalreicllkelkhknivrl~ 67 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDD---------------DDEGVPSSALREICLLKELKHKNIVRLH 67 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccC---------------CCCCCcHHHHHHHHHHHHhhhcceeehh
Confidence 3555678999999999999955 68899999985332 1223345677899999999999999999
Q ss_pred EEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEE
Q 002250 709 CSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRI 788 (947)
Q Consensus 709 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl 788 (947)
+....+...-+|+||+ ..+|..+..... ..++......++.|+.+|+.|+| ++.+.|||+||.|.++..+|+.|+
T Consensus 68 dvlhsdkkltlvfe~c-dqdlkkyfdsln-g~~d~~~~rsfmlqllrgl~fch---shnvlhrdlkpqnllin~ngelkl 142 (292)
T KOG0662|consen 68 DVLHSDKKLTLVFEFC-DQDLKKYFDSLN-GDLDPEIVRSFMLQLLRGLGFCH---SHNVLHRDLKPQNLLINRNGELKL 142 (292)
T ss_pred hhhccCceeEEeHHHh-hHHHHHHHHhcC-CcCCHHHHHHHHHHHHhhhhhhh---hhhhhhccCCcceEEeccCCcEEe
Confidence 9999999999999999 457888887653 45888889999999999999999 899999999999999999999999
Q ss_pred eccccceecccCCCCcceecccccccccCccccccCC-CCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc
Q 002250 789 ADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCK-INEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKM 867 (947)
Q Consensus 789 ~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 867 (947)
+|||+|+-.+-.. ...+..+-|..|.+|.++.+.+ |+...|+||-||++.|+.....|..+...-.+.+.+..+...
T Consensus 143 adfglarafgipv--rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg 220 (292)
T KOG0662|consen 143 ADFGLARAFGIPV--RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLG 220 (292)
T ss_pred cccchhhhcCCce--EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhC
Confidence 9999998654332 2233345689999999999876 788999999999999999977776554443444444333222
Q ss_pred cc-ccccc---ccccCCC-C---------ccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 868 DS-RDSML---TVVDPNI-S---------EILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 868 ~~-~~~~~---~~~d~~~-~---------~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
.. ++.+. ..-|-.. + .+.+.....=.++.+..+.-+|.+|.++.+.+++
T Consensus 221 ~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh 283 (292)
T KOG0662|consen 221 TPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH 283 (292)
T ss_pred CCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence 11 11111 1111111 1 1112222233466667777899999999988764
No 389
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=1.4e-30 Score=273.94 Aligned_cols=220 Identities=25% Similarity=0.244 Sum_probs=174.5
Q ss_pred cCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEEEEecCCccE
Q 002250 640 GGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYCSITSEDSNL 718 (947)
Q Consensus 640 G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 718 (947)
|.+|.||+++.+ +++.||+|++... ..+.+|...+....||||+++++++...+..+
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~----------------------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 61 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKS----------------------SEYSRERLTIIPHCVPNMVCLHKYIVSEDSVF 61 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecch----------------------hhhhhHHHHHHhcCCCceeehhhheecCCeEE
Confidence 899999999965 7899999998321 12334555555667999999999999999999
Q ss_pred EEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEeccccceecc
Q 002250 719 LVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFGLAKIVQ 798 (947)
Q Consensus 719 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 798 (947)
+||||+++|+|.+++.+. ..+++.....++.|++.||+||| +.+|+||||||+||+++.++.++++|||.+....
T Consensus 62 lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~ 136 (237)
T cd05576 62 LVLQHAEGGKLWSHISKF--LNIPEECVKRWAAEMVVALDALH---REGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVE 136 (237)
T ss_pred EEEecCCCCCHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEEEecccchhccc
Confidence 999999999999999764 34889999999999999999999 8999999999999999999999999999876543
Q ss_pred cCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhcccccccccccc
Q 002250 799 TGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDSRDSMLTVVD 878 (947)
Q Consensus 799 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 878 (947)
... ....++..|+|||+.....++.++||||+|+++|||++|..|+..... .... ...
T Consensus 137 ~~~-----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~-----------~~~~------~~~ 194 (237)
T cd05576 137 DSC-----DGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPS-----------GINT------HTT 194 (237)
T ss_pred ccc-----ccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCch-----------hccc------ccc
Confidence 321 123457789999999888899999999999999999999988632100 0000 000
Q ss_pred CCCCccCHHHHHHHHHHHHhccCCCCCCCCCHH
Q 002250 879 PNISEILKEDALKVLRIAIHCTNKLPAFRPSMR 911 (947)
Q Consensus 879 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 911 (947)
.. .+......+.+++.+|++.||++||++.
T Consensus 195 ~~---~~~~~~~~~~~li~~~l~~dp~~R~~~~ 224 (237)
T cd05576 195 LN---IPEWVSEEARSLLQQLLQFNPTERLGAG 224 (237)
T ss_pred cC---CcccCCHHHHHHHHHHccCCHHHhcCCC
Confidence 01 1222345678899999999999999973
No 390
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=3.2e-31 Score=271.16 Aligned_cols=263 Identities=20% Similarity=0.227 Sum_probs=203.1
Q ss_pred HHHhhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccc--
Q 002250 625 KEIIDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRH-- 701 (947)
Q Consensus 625 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-- 701 (947)
+.+..+|.+...+|+|.||.|-++... .+..||||+++.. ..-.++..-|+++++++.+
T Consensus 85 D~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V------------------~kYreAa~iEi~vLqki~~~D 146 (415)
T KOG0671|consen 85 DILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV------------------DKYREAALIEIEVLQKINESD 146 (415)
T ss_pred cccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH------------------HHHhhHHHHHHHHHHHHHhcC
Confidence 445789999999999999999999854 5789999988311 1223455679999999942
Q ss_pred c----ccceEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCC
Q 002250 702 V----NVVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSN 777 (947)
Q Consensus 702 ~----niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~N 777 (947)
| -+|.+.+||...+..++|+|.+ |-|+.++++.+...+++..++..|+.|++++++||| +.+++|-||||+|
T Consensus 147 P~g~~rcv~m~~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh---~~kl~HTDLKPEN 222 (415)
T KOG0671|consen 147 PNGKFRCVQMRDWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLH---DLKLTHTDLKPEN 222 (415)
T ss_pred CCCceEEEeeehhhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHH---hcceeecCCChhe
Confidence 2 3678889999999999999999 779999999988899999999999999999999999 8999999999999
Q ss_pred eEecC--------------------CCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHH
Q 002250 778 ILLDL--------------------EWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGV 837 (947)
Q Consensus 778 Ill~~--------------------~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv 837 (947)
|++-+ +..++++|||.|++..... ...+.|..|.|||++.+-.++.++||||+||
T Consensus 223 ILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h-----s~iVsTRHYRAPEViLgLGwS~pCDvWSiGC 297 (415)
T KOG0671|consen 223 ILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH-----STIVSTRHYRAPEVILGLGWSQPCDVWSIGC 297 (415)
T ss_pred EEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccCc-----ceeeeccccCCchheeccCcCCccCceeeee
Confidence 99931 3458999999998765544 3567899999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCcccHHHHHHhhccc------------------ccc---------ccccccCCC-----CccC
Q 002250 838 VLMELVTGKRPIVPEFGDSKDIVNWVYSKMDS------------------RDS---------MLTVVDPNI-----SEIL 885 (947)
Q Consensus 838 ~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~------------------~~~---------~~~~~d~~~-----~~~~ 885 (947)
|++|+.||..-|.... +.+++ .++...... .-. ...+.++-. ....
T Consensus 298 IL~ElytG~~LFqtHe-n~EHL-aMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~ 375 (415)
T KOG0671|consen 298 ILVELYTGETLFQTHE-NLEHL-AMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQD 375 (415)
T ss_pred EEEEeeccceecccCC-cHHHH-HHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccC
Confidence 9999999999886443 11111 111111100 000 011111111 1112
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 886 KEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 886 ~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
..+...+++++.+++.+||.+|+|+.|++.+
T Consensus 376 d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~H 406 (415)
T KOG0671|consen 376 DLEHVQLFDLLRRMLEFDPARRITLREALSH 406 (415)
T ss_pred cHHHhHHHHHHHHHHccCccccccHHHHhcC
Confidence 3456679999999999999999999999863
No 391
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=7e-31 Score=268.65 Aligned_cols=243 Identities=27% Similarity=0.293 Sum_probs=189.4
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-cccccce
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-RHVNVVK 706 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~ 706 (947)
.+|.....||+|+||.|..|.-+ +.+.+|||+++.+..-++. +.+--..|-++++.. +-|.++.
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdD--------------Dvectm~EKrvLAL~~kppFL~q 414 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDD--------------DVECTMVEKRVLALPGKPPFLVQ 414 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecC--------------cccceehhhhheecCCCCchHHH
Confidence 56788899999999999999966 5678999999765543332 222234466677655 5789999
Q ss_pred EEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCe
Q 002250 707 LYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKP 786 (947)
Q Consensus 707 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 786 (947)
+..+|+.-+..|.||||+.||+|.-.++..++. .+....-.|..||-||-+|| +++|+.||||..|||+|.+|.+
T Consensus 415 lHScFQTmDRLyFVMEyvnGGDLMyhiQQ~GkF--KEp~AvFYAaEiaigLFFLh---~kgIiYRDLKLDNvmLd~eGHi 489 (683)
T KOG0696|consen 415 LHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKF--KEPVAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHI 489 (683)
T ss_pred HHHHhhhhhheeeEEEEecCchhhhHHHHhccc--CCchhhhhhHHHHHHhhhhh---cCCeeeeeccccceEeccCCce
Confidence 999999999999999999999999999886664 44445557788899999999 9999999999999999999999
Q ss_pred EEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 002250 787 RIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSK 866 (947)
Q Consensus 787 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 866 (947)
||+|||+++.---+ ...+...+||+.|+|||++....|+..+|.|||||++|||+.|++||+++ +..+.....
T Consensus 490 Ki~DFGmcKEni~~--~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGe-----DE~elF~aI 562 (683)
T KOG0696|consen 490 KIADFGMCKENIFD--GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGE-----DEDELFQAI 562 (683)
T ss_pred EeeecccccccccC--CcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCC-----CHHHHHHHH
Confidence 99999999743322 22345679999999999999999999999999999999999999999543 222222222
Q ss_pred ccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCC
Q 002250 867 MDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRP 908 (947)
Q Consensus 867 ~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP 908 (947)
.+.... ++.....+...+....+.+.|.+|.
T Consensus 563 ~ehnvs-----------yPKslSkEAv~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 563 MEHNVS-----------YPKSLSKEAVAICKGLLTKHPGKRL 593 (683)
T ss_pred HHccCc-----------CcccccHHHHHHHHHHhhcCCcccc
Confidence 222111 2333445566777788889999984
No 392
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=4.1e-31 Score=272.40 Aligned_cols=267 Identities=27% Similarity=0.332 Sum_probs=198.7
Q ss_pred HHHhhccCCcccccccCceeEEEEE-eCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccc
Q 002250 625 KEIIDAVKPENLIGKGGSGNVYKVV-LNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVN 703 (947)
Q Consensus 625 ~~~~~~~~~~~~iG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n 703 (947)
..+.++|-..+.||+|+|++||||. +...+.||||+-+... .++.. +...-.+...+|..|.+.|.||.
T Consensus 459 ptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK-~WrdE---------KKeNYhKHAcREyrIHKeLDHpR 528 (775)
T KOG1151|consen 459 PTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNK-NWRDE---------KKENYHKHACREYRIHKELDHPR 528 (775)
T ss_pred cchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhcc-chhhH---------hhhhHHHHHHHHHhhhhccCcce
Confidence 4556888899999999999999999 5568899999753222 22211 11122355678999999999999
Q ss_pred cceEEEEEecC-CccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecC
Q 002250 704 VVKLYCSITSE-DSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDL 782 (947)
Q Consensus 704 iv~l~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~ 782 (947)
||++|+||.-+ +..|-|+||++|.+|.-+++.. ...++.....|+.||+.||.||.+- +.+|||-||||.|||+-.
T Consensus 529 IVKlYDyfslDtdsFCTVLEYceGNDLDFYLKQh--klmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~ 605 (775)
T KOG1151|consen 529 IVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQH--KLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVN 605 (775)
T ss_pred eeeeeeeeeeccccceeeeeecCCCchhHHHHhh--hhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEec
Confidence 99999999764 5568999999999999999863 4578888999999999999999854 789999999999999953
Q ss_pred ---CCCeEEeccccceecccCCCC-----cceecccccccccCccccccC----CCCCccchHHHHHHHHHHHhCCCCCC
Q 002250 783 ---EWKPRIADFGLAKIVQTGEAG-----DLTHVIAGTHGYIAPEYAYTC----KINEKSDVYSFGVVLMELVTGKRPIV 850 (947)
Q Consensus 783 ---~~~~kl~DfG~a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~----~~~~~~Dv~slGv~l~elltg~~p~~ 850 (947)
-|.+||+|||+++++..+.+. ..+....||++|++||.+.-+ +.+.|+||||.||++|+++.|+.||.
T Consensus 606 GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFG 685 (775)
T KOG1151|consen 606 GTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFG 685 (775)
T ss_pred CcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCC
Confidence 488999999999988765443 234456799999999998543 46789999999999999999999994
Q ss_pred CCCCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 002250 851 PEFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVV 914 (947)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~ 914 (947)
... ...++.+ +... ...-+-.++.- +-...+...++++|+.+.-++|....++.
T Consensus 686 hnq-sQQdILq-------eNTI-lkAtEVqFP~K-PvVsseAkaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 686 HNQ-SQQDILQ-------ENTI-LKATEVQFPPK-PVVSSEAKAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred Cch-hHHHHHh-------hhch-hcceeccCCCC-CccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence 321 2222222 1111 11111111111 11233466788899999999988777664
No 393
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.96 E-value=6.7e-31 Score=292.66 Aligned_cols=244 Identities=25% Similarity=0.421 Sum_probs=186.3
Q ss_pred CCcccccccCce-eEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-cccccceEEE
Q 002250 632 KPENLIGKGGSG-NVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-RHVNVVKLYC 709 (947)
Q Consensus 632 ~~~~~iG~G~~g-~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~ 709 (947)
...+.+|.|+.| .||+|... |+.||||++.+ ......++||..++.- +|||||++++
T Consensus 512 ~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~--------------------e~~~~A~rEi~lL~eSD~H~NviRyyc 570 (903)
T KOG1027|consen 512 SPKEILGYGSNGTVVFRGVYE-GREVAVKRLLE--------------------EFFDFAQREIQLLQESDEHPNVIRYYC 570 (903)
T ss_pred ccHHHcccCCCCcEEEEEeeC-CceehHHHHhh--------------------HhHHHHHHHHHHHHhccCCCceEEEEe
Confidence 345678999988 47999988 89999998831 2334567999999888 6999999999
Q ss_pred EEecCCccEEEEeccCCCChHHHhhhc--CCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecC---C-
Q 002250 710 SITSEDSNLLVYEYLPNGSLWDRLHTC--HKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDL---E- 783 (947)
Q Consensus 710 ~~~~~~~~~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~---~- 783 (947)
.-.++...||..|.| ..+|.|++... ......-...+.+..|+++|++||| +.+||||||||.|||++. +
T Consensus 571 ~E~d~qF~YIalELC-~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLH---sl~iVHRDLkPQNILI~~~~~~~ 646 (903)
T KOG1027|consen 571 SEQDRQFLYIALELC-ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLH---SLKIVHRDLKPQNILISVPSADG 646 (903)
T ss_pred eccCCceEEEEehHh-hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHH---hcccccccCCCceEEEEccCCCc
Confidence 999999999999999 56999999874 1111111345678889999999999 899999999999999975 3
Q ss_pred -CCeEEeccccceecccCCCC-cceecccccccccCccccccCCCCCccchHHHHHHHHHHHhC-CCCCCCCCCCcccHH
Q 002250 784 -WKPRIADFGLAKIVQTGEAG-DLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTG-KRPIVPEFGDSKDIV 860 (947)
Q Consensus 784 -~~~kl~DfG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg-~~p~~~~~~~~~~~~ 860 (947)
..++|+|||+++....+... .......||.+|+|||++....-+.++||||+||++|+.++| .+||......+.++.
T Consensus 647 ~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl 726 (903)
T KOG1027|consen 647 TLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANIL 726 (903)
T ss_pred ceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhh
Confidence 46899999999877655432 223455799999999999998888899999999999999995 899954432222222
Q ss_pred HHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 861 NWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 861 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
. +...+.. +.... ++ ...++|.+|++.+|..||++.+|+.
T Consensus 727 ~-------~~~~L~~-----L~~~~-d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 727 T-------GNYTLVH-----LEPLP-DC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred c-------Cccceee-----eccCc-hH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 1 1111111 11111 11 5678888999999999999999974
No 394
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=8e-31 Score=275.13 Aligned_cols=252 Identities=23% Similarity=0.308 Sum_probs=202.1
Q ss_pred hccCCcccccccCceeEEEEEeCC-CcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLNS-GKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
.+++.+..||-|+||.|-.+..+. ...+|+|+++.. ........+....|-.+|...+.|.||++
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~--------------hIVdtkQqeHv~sEr~Im~~~~s~fIvrL 485 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKK--------------HIVDTKQQEHVFSERNIMMECRSDFIVRL 485 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHh--------------hccchhHHHHHHhHHHHHHhcCchHHHHH
Confidence 456667789999999999998664 334888887421 11223445677889999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
|..|.++..+|+.||-|=||.++..++..+ .++.....-++..+.+|++||| +++||+|||||+|.+++.+|-+|
T Consensus 486 YrTfrd~kyvYmLmEaClGGElWTiLrdRg--~Fdd~tarF~~acv~EAfeYLH---~k~iIYRDLKPENllLd~~Gy~K 560 (732)
T KOG0614|consen 486 YRTFRDSKYVYMLMEACLGGELWTILRDRG--SFDDYTARFYVACVLEAFEYLH---RKGIIYRDLKPENLLLDNRGYLK 560 (732)
T ss_pred HHHhccchhhhhhHHhhcCchhhhhhhhcC--CcccchhhhhHHHHHHHHHHHH---hcCceeccCChhheeeccCCceE
Confidence 999999999999999999999999999743 4666666778888999999999 99999999999999999999999
Q ss_pred EeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc
Q 002250 788 IADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKM 867 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 867 (947)
|.|||+|+....+.... .++||+.|.|||++.+...+.++|.||+|+++||+++|.+||.+. +-........
T Consensus 561 LVDFGFAKki~~g~KTw---TFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~-----dpmktYn~IL 632 (732)
T KOG0614|consen 561 LVDFGFAKKIGSGRKTW---TFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGV-----DPMKTYNLIL 632 (732)
T ss_pred EeehhhHHHhccCCcee---eecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCC-----chHHHHHHHH
Confidence 99999999887765433 468999999999999999999999999999999999999999533 2222212222
Q ss_pred cccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHHH
Q 002250 868 DSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPS-----MRVVVQM 916 (947)
Q Consensus 868 ~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~ev~~~ 916 (947)
.+-+. .+++........+++.+..+.+|.+|.. ..+|-++
T Consensus 633 kGid~---------i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH 677 (732)
T KOG0614|consen 633 KGIDK---------IEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKH 677 (732)
T ss_pred hhhhh---------hhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhh
Confidence 22111 2345666677888899999999999975 5666544
No 395
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=5.1e-30 Score=255.64 Aligned_cols=249 Identities=22% Similarity=0.297 Sum_probs=196.5
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-cccccce
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-RHVNVVK 706 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~ 706 (947)
.+|...+.||+|+|+.|..++++ +.+.+|+|+++.... ....+....+.|-.+..+. +||.+|.
T Consensus 250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~--------------nddedidwvqtek~vfe~asn~pflvg 315 (593)
T KOG0695|consen 250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELV--------------NDDEDIDWVQTEKHVFEQASNNPFLVG 315 (593)
T ss_pred ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhc--------------CCcccchhHHhhHHHHHhccCCCeEEe
Confidence 56888999999999999999955 688999999853221 2234556677888888776 7999999
Q ss_pred EEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCe
Q 002250 707 LYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKP 786 (947)
Q Consensus 707 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 786 (947)
+..+|+.+...++|.||++||+|.-+++.+ ..+++....-....|.-||.||| +++|+.||+|..|||+|..|.+
T Consensus 316 lhscfqtesrlffvieyv~ggdlmfhmqrq--rklpeeharfys~ei~lal~flh---~rgiiyrdlkldnvlldaeghi 390 (593)
T KOG0695|consen 316 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEICLALNFLH---ERGIIYRDLKLDNVLLDAEGHI 390 (593)
T ss_pred hhhhhcccceEEEEEEEecCcceeeehhhh--hcCcHHHhhhhhHHHHHHHHHHh---hcCeeeeeccccceEEccCCce
Confidence 999999999999999999999998877764 34777777777788899999999 9999999999999999999999
Q ss_pred EEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCC--CCcccHHHHHH
Q 002250 787 RIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEF--GDSKDIVNWVY 864 (947)
Q Consensus 787 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~--~~~~~~~~~~~ 864 (947)
|++|+|+++.--. ....++.++|||.|+|||++++..|...+|.||+||+++||+.|+.||+-.. +...+..+++.
T Consensus 391 kltdygmcke~l~--~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylf 468 (593)
T KOG0695|consen 391 KLTDYGMCKEGLG--PGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLF 468 (593)
T ss_pred eecccchhhcCCC--CCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHH
Confidence 9999999975322 2334567899999999999999999999999999999999999999996432 33333334443
Q ss_pred hhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCC
Q 002250 865 SKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRP 908 (947)
Q Consensus 865 ~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP 908 (947)
..+-+... .+++...-+...+...-+++||.+|.
T Consensus 469 qvilekqi----------riprslsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 469 QVILEKQI----------RIPRSLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred HHHhhhcc----------cccceeehhhHHHHHHhhcCCcHHhc
Confidence 33322221 12333333455666788899999985
No 396
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.96 E-value=4.8e-30 Score=240.18 Aligned_cols=200 Identities=29% Similarity=0.369 Sum_probs=164.4
Q ss_pred hccCCcccccccCceeEEEEEe-CCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-cccccce
Q 002250 629 DAVKPENLIGKGGSGNVYKVVL-NSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-RHVNVVK 706 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~ 706 (947)
+.......||+|++|.|-+.++ .+|+..|+|++... ...+...+..+|+.+..+. .+|.+|.
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~t----------------vn~q~q~r~L~dldi~~r~~~CPf~V~ 109 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRAT----------------VNSQEQKRLLMDLDIIMRTVDCPFTVH 109 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhh----------------cChHHHHHHHHhhhhhccCCCCCeEEE
Confidence 4445567899999999999885 47999999998311 1224455667788877665 7999999
Q ss_pred EEEEEecCCccEEEEeccCCCChHHHhhhc--CCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCC
Q 002250 707 LYCSITSEDSNLLVYEYLPNGSLWDRLHTC--HKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEW 784 (947)
Q Consensus 707 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~ 784 (947)
+||.+..++..++.||.| ..||..+-++. .+...++...=+||..|.+||.|||+ ...++|||+||+|||++.+|
T Consensus 110 FyGa~~regdvwIcME~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~--kL~vIHRDvKPsNiLIn~~G 186 (282)
T KOG0984|consen 110 FYGALFREGDVWICMELM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHS--KLSVIHRDVKPSNILINYDG 186 (282)
T ss_pred eehhhhccccEEEeHHHh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHH--HhhhhhccCCcceEEEccCC
Confidence 999999999999999999 55777765542 45678888999999999999999996 67899999999999999999
Q ss_pred CeEEeccccceecccCCCCcceecccccccccCcccccc----CCCCCccchHHHHHHHHHHHhCCCCCC
Q 002250 785 KPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYT----CKINEKSDVYSFGVVLMELVTGKRPIV 850 (947)
Q Consensus 785 ~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Dv~slGv~l~elltg~~p~~ 850 (947)
.+|+||||++.++.+.-. .+...|-..|||||.+.. ..|+-|+||||+|+++.||.+++.||.
T Consensus 187 qVKiCDFGIsG~L~dSiA---kt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~ 253 (282)
T KOG0984|consen 187 QVKICDFGISGYLVDSIA---KTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYE 253 (282)
T ss_pred cEEEcccccceeehhhhH---HHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccc
Confidence 999999999987755432 223457788999998853 358899999999999999999999984
No 397
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.96 E-value=2e-29 Score=293.69 Aligned_cols=258 Identities=19% Similarity=0.209 Sum_probs=166.5
Q ss_pred hhccCCcccccccCceeEEEEEeC-C----CcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcccc
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLN-S----GKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHV 702 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~-~----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 702 (947)
.++|.+.+.||+|+||.||+|+.. + +..||||++... ...+....| .++...+.
T Consensus 131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~-------------------~~~e~~~~e--~l~~~~~~ 189 (566)
T PLN03225 131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEY-------------------GAVEIWMNE--RVRRACPN 189 (566)
T ss_pred cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEeccc-------------------chhHHHHHH--HHHhhchh
Confidence 468899999999999999999965 4 689999987311 000111111 11112222
Q ss_pred ccceEEEE------EecCCccEEEEeccCCCChHHHhhhcCCc------------------cCCHHHHHHHHHHHHHHHH
Q 002250 703 NVVKLYCS------ITSEDSNLLVYEYLPNGSLWDRLHTCHKI------------------EMDWVVRYAIAVGAAKGLE 758 (947)
Q Consensus 703 niv~l~~~------~~~~~~~~lv~e~~~~gsL~~~l~~~~~~------------------~~~~~~~~~i~~~ia~~l~ 758 (947)
+++.+... ...+...++||||+++++|.+++...... .........++.|++.||+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~ 269 (566)
T PLN03225 190 SCADFVYGFLEPVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALD 269 (566)
T ss_pred hHHHHHHhhhcccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHH
Confidence 22222211 24566789999999999999998753210 1122345578999999999
Q ss_pred HHhcCCCCCeEeccCCCCCeEecC-CCCeEEeccccceecccCCCCcceecccccccccCccccccC-------------
Q 002250 759 YLHHGFDRPVIHRDVKSSNILLDL-EWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTC------------- 824 (947)
Q Consensus 759 yLH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------------- 824 (947)
||| +++|+||||||+|||++. ++.+||+|||+|+......... .....+|++|+|||.+...
T Consensus 270 yLH---~~gIiHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~-~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~ 345 (566)
T PLN03225 270 GLH---STGIVHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYI-PKEFLLDPRYAAPEQYIMSTQTPSAPSAPVAT 345 (566)
T ss_pred HHH---HCCEEeCcCCHHHEEEeCCCCcEEEEeCCCccccccccccC-CcccccCCCccChHHhhccCCCCCCccccccc
Confidence 999 899999999999999986 5899999999998654332221 2245789999999965322
Q ss_pred ---------CCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhccccc---cccccccCCCC-------ccC
Q 002250 825 ---------KINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDSRD---SMLTVVDPNIS-------EIL 885 (947)
Q Consensus 825 ---------~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~-------~~~ 885 (947)
.++.++|||||||++|||+++..|+.. +...+......... .+.....+... +..
T Consensus 346 ~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (566)
T PLN03225 346 ALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDS------NLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVL 419 (566)
T ss_pred cccchhccccCCCCcccHHHHHHHHHHHhCcCCCch------HHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhc
Confidence 234567999999999999997766421 11111111000000 00001111100 011
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 886 KEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 886 ~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
........+++.+|++.||++|||+.|++++
T Consensus 420 d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~H 450 (566)
T PLN03225 420 DLDGGAGWELLKSMMRFKGRQRISAKAALAH 450 (566)
T ss_pred cccchHHHHHHHHHccCCcccCCCHHHHhCC
Confidence 1112345589999999999999999999975
No 398
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=2.5e-31 Score=255.61 Aligned_cols=269 Identities=20% Similarity=0.270 Sum_probs=191.6
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
..|.-..+||+|.||+||+|+.+ .|+.||+|++.-. .....-.....+|++++..++|+|++.+
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlme---------------neKeGfpitalreikiL~~lkHenv~nl 81 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLME---------------NEKEGFPITALREIKILQLLKHENVVNL 81 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHh---------------ccccCCcHHHHHHHHHHHHhcchhHHHH
Confidence 45666788999999999999955 6888999876311 1122233456789999999999999999
Q ss_pred EEEEec--------CCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeE
Q 002250 708 YCSITS--------EDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNIL 779 (947)
Q Consensus 708 ~~~~~~--------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIl 779 (947)
++.|.. ....|+||.+++. +|.-.+.. ....++...+.+++.++..||.|+| +..|+|||+||.|+|
T Consensus 82 iEic~tk~Tp~~r~r~t~ylVf~~ceh-DLaGlLsn-~~vr~sls~Ikk~Mk~Lm~GL~~iH---r~kilHRDmKaaNvL 156 (376)
T KOG0669|consen 82 IEICRTKATPTNRDRATFYLVFDFCEH-DLAGLLSN-RKVRFSLSEIKKVMKGLMNGLYYIH---RNKILHRDMKAANVL 156 (376)
T ss_pred HHHHhhccCCcccccceeeeeHHHhhh-hHHHHhcC-ccccccHHHHHHHHHHHHHHHHHHH---HhhHHhhcccHhhEE
Confidence 877744 2346899999965 77777765 3456888899999999999999999 899999999999999
Q ss_pred ecCCCCeEEeccccceecccCCCC--cceecccccccccCccccccC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCC-
Q 002250 780 LDLEWKPRIADFGLAKIVQTGEAG--DLTHVIAGTHGYIAPEYAYTC-KINEKSDVYSFGVVLMELVTGKRPIVPEFGD- 855 (947)
Q Consensus 780 l~~~~~~kl~DfG~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~- 855 (947)
++.++.+||+|||+|+.+...+.. ...+..+-|..|.+||.+.+. .|+++.|||+-||++.||+||.+-+.+..+.
T Consensus 157 It~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqq 236 (376)
T KOG0669|consen 157 ITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQ 236 (376)
T ss_pred EcCCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHH
Confidence 999999999999999765543322 223344569999999999875 5899999999999999999998776433211
Q ss_pred cccHHHHH--------HhhccccccccccccCCCCc----cCHHHHH------HHHHHHHhccCCCCCCCCCHHHHHHHh
Q 002250 856 SKDIVNWV--------YSKMDSRDSMLTVVDPNISE----ILKEDAL------KVLRIAIHCTNKLPAFRPSMRVVVQML 917 (947)
Q Consensus 856 ~~~~~~~~--------~~~~~~~~~~~~~~d~~~~~----~~~~~~~------~l~~l~~~cl~~dP~~RPt~~ev~~~L 917 (947)
.-.+.+.+ +..++.-..+..+.-+.+++ ..++... ...+++..++..||.+|+++.+++.+-
T Consensus 237 ql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~ 316 (376)
T KOG0669|consen 237 QLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHD 316 (376)
T ss_pred HHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchh
Confidence 00111111 11111111111111111111 0111122 466788899999999999999998653
No 399
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.96 E-value=5.9e-29 Score=281.70 Aligned_cols=272 Identities=20% Similarity=0.245 Sum_probs=183.8
Q ss_pred hhccCCcccccccCceeEEEEEe-----------------CCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHH
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVL-----------------NSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYD 690 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~-----------------~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (947)
.++|++.++||+|+||+||+|.. ..++.||||++.........++... ........+.+.
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e---~~~~~~~~e~~~ 220 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKT---GTLAKGSAETGM 220 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhh---hhhhhcccchhH
Confidence 46899999999999999999964 2356899999853322111110000 000112234566
Q ss_pred HHHHHHhhcccccc-----ceEEEEEec--------CCccEEEEeccCCCChHHHhhhcC--------------------
Q 002250 691 AEVATLSAVRHVNV-----VKLYCSITS--------EDSNLLVYEYLPNGSLWDRLHTCH-------------------- 737 (947)
Q Consensus 691 ~E~~~l~~l~h~ni-----v~l~~~~~~--------~~~~~lv~e~~~~gsL~~~l~~~~-------------------- 737 (947)
.|+.++.+++|.++ ++++++|.. ++..++||||+++++|.++++...
T Consensus 221 vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~ 300 (507)
T PLN03224 221 VEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDN 300 (507)
T ss_pred HHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhh
Confidence 78888888877654 677777753 356799999999999999987421
Q ss_pred --CccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEeccccceecccCCCCcceecccccccc
Q 002250 738 --KIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGY 815 (947)
Q Consensus 738 --~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y 815 (947)
....+|..+..++.|++.||+|+| +.+|+||||||+||+++.++.+||+|||++.......... .....+|+.|
T Consensus 301 ~~~~~~~~~~~~~i~~ql~~aL~~lH---~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~-~~~g~~tp~Y 376 (507)
T PLN03224 301 MPQDKRDINVIKGVMRQVLTGLRKLH---RIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFN-PLYGMLDPRY 376 (507)
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccC-ccccCCCcce
Confidence 123467788899999999999999 8899999999999999999999999999997654332211 1122357899
Q ss_pred cCccccccCCC----------------------CCccchHHHHHHHHHHHhCCC-CCCCCC--C-----CcccHHHHHHh
Q 002250 816 IAPEYAYTCKI----------------------NEKSDVYSFGVVLMELVTGKR-PIVPEF--G-----DSKDIVNWVYS 865 (947)
Q Consensus 816 ~aPE~~~~~~~----------------------~~~~Dv~slGv~l~elltg~~-p~~~~~--~-----~~~~~~~~~~~ 865 (947)
+|||.+..... ..+.||||+||++|||++|.. ||.... . ...+...|...
T Consensus 377 ~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~ 456 (507)
T PLN03224 377 SPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMY 456 (507)
T ss_pred eChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhh
Confidence 99998754321 124799999999999999875 663211 0 01111112110
Q ss_pred hccccccccccccCCCCccCHHHHHHHHHHHHhccCCCC---CCCCCHHHHHHH
Q 002250 866 KMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLP---AFRPSMRVVVQM 916 (947)
Q Consensus 866 ~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP---~~RPt~~ev~~~ 916 (947)
... ...+. ..........+++.+++..+| .+|+|+.|++++
T Consensus 457 --~~~-------~~~~~-~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 457 --KGQ-------KYDFS-LLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred --ccc-------CCCcc-cccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 000 00111 122334567788889998766 689999999874
No 400
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.96 E-value=5.8e-29 Score=262.55 Aligned_cols=239 Identities=30% Similarity=0.402 Sum_probs=190.6
Q ss_pred CceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEEEEecCCccEE
Q 002250 641 GSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYCSITSEDSNLL 719 (947)
Q Consensus 641 ~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 719 (947)
+||.||+|... +++.+|+|++..... ......+.+|++.+++++|+|++++++++......++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~----------------~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l 64 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKI----------------KKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYL 64 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEeccccc----------------ccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEE
Confidence 58999999976 589999999842211 0115788999999999999999999999999999999
Q ss_pred EEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEeccccceeccc
Q 002250 720 VYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFGLAKIVQT 799 (947)
Q Consensus 720 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 799 (947)
++||+++++|.+++..... +++.....++.+++.+++||| ..+++|+||+|+||++++++.++++|||.+.....
T Consensus 65 ~~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~ 139 (244)
T smart00220 65 VMEYCDGGDLFDLLKKRGR--LSEDEARFYARQILSALEYLH---SNGIIHRDLKPENILLDEDGHVKLADFGLARQLDP 139 (244)
T ss_pred EEeCCCCCCHHHHHHhccC--CCHHHHHHHHHHHHHHHHHHH---HcCeecCCcCHHHeEECCCCcEEEccccceeeecc
Confidence 9999999999999986433 789999999999999999999 88999999999999999999999999999987655
Q ss_pred CCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhccccccccccccC
Q 002250 800 GEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDSRDSMLTVVDP 879 (947)
Q Consensus 800 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 879 (947)
.. ......++..|+|||......++.++||||+|+++||+++|..||... .......+... .....
T Consensus 140 ~~---~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~-~~~~~~~~~~~---~~~~~------- 205 (244)
T smart00220 140 GG---LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGD-DQLLELFKKIG---KPKPP------- 205 (244)
T ss_pred cc---ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCC-CcHHHHHHHHh---ccCCC-------
Confidence 42 122346788999999998888999999999999999999999998432 11111111111 11100
Q ss_pred CCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 880 NISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 880 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
........+..+.+++.+|+..+|++||++.++++
T Consensus 206 -~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 206 -FPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred -CccccccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence 00011014457889999999999999999999987
No 401
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.96 E-value=2.5e-29 Score=238.62 Aligned_cols=258 Identities=19% Similarity=0.282 Sum_probs=197.4
Q ss_pred hhccCCcccccccCceeEEEEE-eCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcc-ccccc
Q 002250 628 IDAVKPENLIGKGGSGNVYKVV-LNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVR-HVNVV 705 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv 705 (947)
.++|++.+++|+|-+++||.|. ..+.+.++||+++| ...+.+.+|+.|++.++ ||||+
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP--------------------VkkkKIkREikIL~nL~gg~NIi 96 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP--------------------VKKKKIKREIKILQNLRGGPNII 96 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeech--------------------HHHHHHHHHHHHHHhccCCCCee
Confidence 4688999999999999999999 56788999999843 34577899999999996 99999
Q ss_pred eEEEEEecCC--ccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCC
Q 002250 706 KLYCSITSED--SNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLE 783 (947)
Q Consensus 706 ~l~~~~~~~~--~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~ 783 (947)
++++...++. ...+|+||+++.+....... ++-..+.-...++++||.|+| +.||+|||+||.|+++|..
T Consensus 97 ~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly~t-----l~d~dIryY~~elLkALdyCH---S~GImHRDVKPhNvmIdh~ 168 (338)
T KOG0668|consen 97 KLLDIVKDPESKTPSLIFEYVNNTDFKQLYPT-----LTDYDIRYYIYELLKALDYCH---SMGIMHRDVKPHNVMIDHE 168 (338)
T ss_pred ehhhhhcCccccCchhHhhhhccccHHHHhhh-----hchhhHHHHHHHHHHHHhHHH---hcCcccccCCcceeeechh
Confidence 9999998754 45799999999877666554 455556667889999999999 9999999999999999965
Q ss_pred -CCeEEeccccceecccCCCCcceecccccccccCccccccC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHH
Q 002250 784 -WKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTC-KINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVN 861 (947)
Q Consensus 784 -~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~ 861 (947)
-..+|+|+|+|.++.++... ...+.+..|.-||.+..- .|+..-|+|||||++..|+..+.||+......+.++.
T Consensus 169 ~rkLrlIDWGLAEFYHp~~eY---nVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVk 245 (338)
T KOG0668|consen 169 LRKLRLIDWGLAEFYHPGKEY---NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVK 245 (338)
T ss_pred hceeeeeecchHhhcCCCcee---eeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHH
Confidence 56999999999988776542 344667788999998654 4888999999999999999999999766555555555
Q ss_pred HHHhhc-------------cccccccccccCCC----Ccc----CH-HHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 862 WVYSKM-------------DSRDSMLTVVDPNI----SEI----LK-EDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 862 ~~~~~~-------------~~~~~~~~~~d~~~----~~~----~~-~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
.+.... .-...+..++.... ..+ .. -..++.++++-..+.+|..+|||++|.+.+
T Consensus 246 IakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 246 IAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred HHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 432211 11111111111100 000 01 123567888889999999999999998753
No 402
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.2e-27 Score=251.14 Aligned_cols=262 Identities=22% Similarity=0.229 Sum_probs=194.5
Q ss_pred hccCCcccccccCceeEEEEE-eCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcc-----c-
Q 002250 629 DAVKPENLIGKGGSGNVYKVV-LNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVR-----H- 701 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----h- 701 (947)
.+|.+.++||.|.|++||.|. ..+.+.||+|+++.. +.-.+....||+++++++ |
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA------------------qhYtEaAlDEIklL~~v~~~Dp~~~ 139 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA------------------QHYTEAALDEIKLLQQVREGDPNDP 139 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh------------------hHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 789999999999999999999 457889999998311 112245678999999983 3
Q ss_pred --cccceEEEEEec----CCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCC
Q 002250 702 --VNVVKLYCSITS----EDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKS 775 (947)
Q Consensus 702 --~niv~l~~~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp 775 (947)
..||++++.|.. +.+++||+|++ |.+|..++.++..+.++...+.+|+.||+.||.|||. ..+|||-||||
T Consensus 140 ~~~~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~--ecgIIHTDlKP 216 (590)
T KOG1290|consen 140 GKKCVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHR--ECGIIHTDLKP 216 (590)
T ss_pred CCceeeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHH--hcCccccCCCc
Confidence 479999999976 45679999999 8899999999888889999999999999999999997 66999999999
Q ss_pred CCeEecCC-----------C------------------------------------------------------------
Q 002250 776 SNILLDLE-----------W------------------------------------------------------------ 784 (947)
Q Consensus 776 ~NIll~~~-----------~------------------------------------------------------------ 784 (947)
+|||+..+ +
T Consensus 217 ENvLl~~~e~~~~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~ 296 (590)
T KOG1290|consen 217 ENVLLCSTEIDPAKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEE 296 (590)
T ss_pred ceeeeeccccchhhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccc
Confidence 99999110 0
Q ss_pred --------------------------------------------------------------------------------
Q 002250 785 -------------------------------------------------------------------------------- 784 (947)
Q Consensus 785 -------------------------------------------------------------------------------- 784 (947)
T Consensus 297 ~~~~~s~n~~~~~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~ 376 (590)
T KOG1290|consen 297 EPNQESYNNEPRINGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIAS 376 (590)
T ss_pred cccccccccccCCCccccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCcccccc
Confidence
Q ss_pred ---------------CeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCC
Q 002250 785 ---------------KPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPI 849 (947)
Q Consensus 785 ---------------~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~ 849 (947)
.+||+|||-|......- +.-.-|..|.|||++.+..|++.+||||++|++||++||...|
T Consensus 377 n~~v~p~~~~~~~di~vKIaDlGNACW~~khF-----T~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLF 451 (590)
T KOG1290|consen 377 NPLVNPDIPLPECDIRVKIADLGNACWVHKHF-----TEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLF 451 (590)
T ss_pred ccccCCCCCCCccceeEEEeeccchhhhhhhh-----chhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceee
Confidence 02333333333221111 0112477899999999999999999999999999999999999
Q ss_pred CCCCC-----CcccHHHHHHhh-------ccccccccccccC--CC------------------CccCHHHHHHHHHHHH
Q 002250 850 VPEFG-----DSKDIVNWVYSK-------MDSRDSMLTVVDP--NI------------------SEILKEDALKVLRIAI 897 (947)
Q Consensus 850 ~~~~~-----~~~~~~~~~~~~-------~~~~~~~~~~~d~--~~------------------~~~~~~~~~~l~~l~~ 897 (947)
++..+ +.+++..++.-. ......-.+.++. .+ -++..+.+.++.++..
T Consensus 452 ePhsG~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~ 531 (590)
T KOG1290|consen 452 EPHSGENYSRDEDHIALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLS 531 (590)
T ss_pred cCCCCCCCCccHHHHHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 87643 233333322111 1111110111110 00 2356788999999999
Q ss_pred hccCCCCCCCCCHHHHHHH
Q 002250 898 HCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 898 ~cl~~dP~~RPt~~ev~~~ 916 (947)
-|++.+|++||||.+.+++
T Consensus 532 PmLef~PeKR~tA~~cl~h 550 (590)
T KOG1290|consen 532 PMLEFDPEKRPTAAQCLKH 550 (590)
T ss_pred HHHhcCccccccHHHHhcC
Confidence 9999999999999999854
No 403
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=2.7e-28 Score=261.95 Aligned_cols=205 Identities=27% Similarity=0.430 Sum_probs=167.0
Q ss_pred hccCCcccccccCceeEEEEE-eCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVV-LNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
..|..++.||-|+||+|..++ ..+...+|+|.+... .+..+ ......++|-.||+....+=||++
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKa------------DVl~r--nQvaHVKAERDILAEADn~WVVrL 694 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKA------------DVLMR--NQVAHVKAERDILAEADNEWVVRL 694 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHH------------HHHhh--hhhhhhhhhhhhHhhcCCcceEEE
Confidence 346667889999999999998 445677899988421 12222 334567789999999999999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
|-.|++++.+|+||+|++||++..+|-+.+ -+++....-++..+++|+++.| ..|+|||||||+|||||.+|.+|
T Consensus 695 yySFQDkdnLYFVMdYIPGGDmMSLLIrmg--IFeE~LARFYIAEltcAiesVH---kmGFIHRDiKPDNILIDrdGHIK 769 (1034)
T KOG0608|consen 695 YYSFQDKDNLYFVMDYIPGGDMMSLLIRMG--IFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIK 769 (1034)
T ss_pred EEEeccCCceEEEEeccCCccHHHHHHHhc--cCHHHHHHHHHHHHHHHHHHHH---hccceecccCccceEEccCCcee
Confidence 999999999999999999999999988743 3566666667778999999999 89999999999999999999999
Q ss_pred Eeccccce---------ecccCCCCcc-------------------------------eecccccccccCccccccCCCC
Q 002250 788 IADFGLAK---------IVQTGEAGDL-------------------------------THVIAGTHGYIAPEYAYTCKIN 827 (947)
Q Consensus 788 l~DfG~a~---------~~~~~~~~~~-------------------------------~~~~~gt~~y~aPE~~~~~~~~ 827 (947)
|+|||++. ++..++.... ....+||+.|+|||++....|+
T Consensus 770 LTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~ 849 (1034)
T KOG0608|consen 770 LTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYT 849 (1034)
T ss_pred eeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCcc
Confidence 99999984 2221111000 0134699999999999999999
Q ss_pred CccchHHHHHHHHHHHhCCCCCCCC
Q 002250 828 EKSDVYSFGVVLMELVTGKRPIVPE 852 (947)
Q Consensus 828 ~~~Dv~slGv~l~elltg~~p~~~~ 852 (947)
.-+|.||.|||+|||+.|+.||...
T Consensus 850 q~cdwws~gvil~em~~g~~pf~~~ 874 (1034)
T KOG0608|consen 850 QLCDWWSVGVILYEMLVGQPPFLAD 874 (1034)
T ss_pred ccchhhHhhHHHHHHhhCCCCccCC
Confidence 9999999999999999999999654
No 404
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=2.5e-29 Score=244.33 Aligned_cols=266 Identities=22% Similarity=0.272 Sum_probs=190.3
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLY 708 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 708 (947)
+.+..+.||.|+||.||.+..+ +|+.||.|++. .....-...+.+-+|++++..++|.|++..+
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~p---------------nvfq~L~s~krvFre~kmLcfFkHdNVLSaL 118 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMP---------------NVFQNLASCKRVFREIKMLSSFRHDNVLSLL 118 (449)
T ss_pred cCCCCCcccccceeEEEeccCCCCccchhHhhcc---------------hHHHHHHHHHHHHHHHHHHHhhccccHHHHH
Confidence 3445688999999999999865 89999999883 1122234456788999999999999999988
Q ss_pred EEEecCC-----ccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCC
Q 002250 709 CSITSED-----SNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLE 783 (947)
Q Consensus 709 ~~~~~~~-----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~ 783 (947)
+..+... +.|+|+|.| ..+|...+-. .+.++...+.-+..||++||.||| +.+|.||||||.|.+++.+
T Consensus 119 DILQPph~dfFqEiYV~TELm-QSDLHKIIVS--PQ~Ls~DHvKVFlYQILRGLKYLH---sA~ILHRDIKPGNLLVNSN 192 (449)
T KOG0664|consen 119 DILQPANPSFFQELYVLTELM-QSDLHKIIVS--PQALTPDHVKVFVYQILRGLKYLH---TANILHRDIKPGNLLVNSN 192 (449)
T ss_pred HhcCCCCchHHHHHHHHHHHH-Hhhhhheecc--CCCCCcchhhhhHHHHHhhhHHHh---hcchhhccCCCccEEeccC
Confidence 8765542 457888988 4467666654 456788888889999999999999 8999999999999999999
Q ss_pred CCeEEeccccceecccCCCCcceecccccccccCccccccCC-CCCccchHHHHHHHHHHHhCCCCCCCCCCC--cccHH
Q 002250 784 WKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCK-INEKSDVYSFGVVLMELVTGKRPIVPEFGD--SKDIV 860 (947)
Q Consensus 784 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slGv~l~elltg~~p~~~~~~~--~~~~~ 860 (947)
...||||||+|+....++... ++..+-|-.|.|||++++.+ |+.++||||.||++.|++..+--|.....- -+-+.
T Consensus 193 CvLKICDFGLARvee~d~~~h-MTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lIt 271 (449)
T KOG0664|consen 193 CILKICDFGLARTWDQRDRLN-MTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMII 271 (449)
T ss_pred ceEEecccccccccchhhhhh-hHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHH
Confidence 999999999999765544322 33445688999999998865 899999999999999999888777432110 00000
Q ss_pred --------HHHHhhcccccccccccc-----C---CCCcc--CHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhc
Q 002250 861 --------NWVYSKMDSRDSMLTVVD-----P---NISEI--LKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEE 919 (947)
Q Consensus 861 --------~~~~~~~~~~~~~~~~~d-----~---~~~~~--~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~ 919 (947)
+-++-..++.. ..++. | .+-.. ......+...+...++..||++|.+..+.+...-.
T Consensus 272 dLLGTPs~EaMr~ACEGAk--~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~ 346 (449)
T KOG0664|consen 272 DLLGTPSQEAMKYACEGAK--NHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYL 346 (449)
T ss_pred HHhCCCcHHHHHHHhhhhH--HHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccc
Confidence 00000011100 01111 0 11111 11222345566778899999999999998876543
No 405
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1.6e-27 Score=232.16 Aligned_cols=260 Identities=19% Similarity=0.301 Sum_probs=196.3
Q ss_pred ccHHHHhhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-
Q 002250 622 FSEKEIIDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV- 699 (947)
Q Consensus 622 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l- 699 (947)
+..-++.+.|.+.+.+|+|.||.+-.++++ +.+.+++|-++. ......+|.+|...--.|
T Consensus 17 l~kv~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~------------------p~tt~~dF~rEfhY~~~Ls 78 (378)
T KOG1345|consen 17 LKKVDLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPR------------------PQTTQADFVREFHYSFFLS 78 (378)
T ss_pred ccccchhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCc------------------chhhHHHHHHHhccceeec
Confidence 334456788999999999999999999976 678899997742 224457899998776666
Q ss_pred cccccceEEEE-EecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCe
Q 002250 700 RHVNVVKLYCS-ITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNI 778 (947)
Q Consensus 700 ~h~niv~l~~~-~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NI 778 (947)
-|.||+..|+. |+..+.+++++||+|.|+|.+-+.. ..+.+....+++.|+++|+.||| +..+||||||.+||
T Consensus 79 ~H~hIi~tY~vaFqt~d~YvF~qE~aP~gdL~snv~~---~GigE~~~K~v~~ql~SAi~fMH---sknlVHRdlK~eNi 152 (378)
T KOG1345|consen 79 PHQHIIDTYEVAFQTSDAYVFVQEFAPRGDLRSNVEA---AGIGEANTKKVFAQLLSAIEFMH---SKNLVHRDLKAENI 152 (378)
T ss_pred cchhhhHHHHHHhhcCceEEEeeccCccchhhhhcCc---ccccHHHHHHHHHHHHHHHHHhh---ccchhhcccccceE
Confidence 48999988865 6777788899999999999888765 34677888899999999999999 99999999999999
Q ss_pred Eec--CCCCeEEeccccceecccCCCCcceecccccccccCccccccC-----CCCCccchHHHHHHHHHHHhCCCCCCC
Q 002250 779 LLD--LEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTC-----KINEKSDVYSFGVVLMELVTGKRPIVP 851 (947)
Q Consensus 779 ll~--~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~Dv~slGv~l~elltg~~p~~~ 851 (947)
|+- +...+|+||||..+..+... ....-+..|.|||..... ...+.+|||.||+++|.++||+.||..
T Consensus 153 Lif~~df~rvKlcDFG~t~k~g~tV-----~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQk 227 (378)
T KOG1345|consen 153 LIFDADFYRVKLCDFGLTRKVGTTV-----KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQK 227 (378)
T ss_pred EEecCCccEEEeeecccccccCcee-----hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchh
Confidence 994 34579999999987443221 122346679999987432 245678999999999999999999986
Q ss_pred CCCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 002250 852 EFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLE 918 (947)
Q Consensus 852 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~ 918 (947)
..-.+...++|.......... ++.....-.+++.++..+-+..+|++|--..++.++-+
T Consensus 228 a~~~d~~Y~~~~~w~~rk~~~--------~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk 286 (378)
T KOG1345|consen 228 ASIMDKPYWEWEQWLKRKNPA--------LPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRK 286 (378)
T ss_pred hhccCchHHHHHHHhcccCcc--------CchhhcccCHHHHHHHHHhcCCcccccchhHHHHHHHH
Confidence 666666777776554433332 22222223345667777889999999955555554443
No 406
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.94 E-value=2.4e-27 Score=253.07 Aligned_cols=201 Identities=25% Similarity=0.370 Sum_probs=168.5
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhccc---CChhhHHHHHHHHhhcc---c
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRS---SRSSEYDAEVATLSAVR---H 701 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~E~~~l~~l~---h 701 (947)
..|...+.+|+|+||.|+.|.++ +...|+||.+.+.. +..... ...-..-.||+||..++ |
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeR------------IL~DtWvrDrkLGtVp~EIqIla~l~~~sH 628 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKER------------ILVDTWVRDRKLGTVPSEIQILATLNKHSH 628 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhh------------hhhhhhhcccccCccchhHHHHHHhhhcCc
Confidence 35888899999999999999976 56789999984322 111111 11223457999999997 9
Q ss_pred cccceEEEEEecCCccEEEEecc-CCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEe
Q 002250 702 VNVVKLYCSITSEDSNLLVYEYL-PNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILL 780 (947)
Q Consensus 702 ~niv~l~~~~~~~~~~~lv~e~~-~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll 780 (947)
+||+|++++|++++.+|++||-. ++-+|.+++... ..+++.....|+.||+.|+++|| +++|||||||-+||.+
T Consensus 629 ~NIlKlLdfFEddd~yyl~te~hg~gIDLFd~IE~k--p~m~E~eAk~IFkQV~agi~hlh---~~~ivhrdikdenviv 703 (772)
T KOG1152|consen 629 ENILKLLDFFEDDDYYYLETEVHGEGIDLFDFIEFK--PRMDEPEAKLIFKQVVAGIKHLH---DQGIVHRDIKDENVIV 703 (772)
T ss_pred cchhhhhheeecCCeeEEEecCCCCCcchhhhhhcc--CccchHHHHHHHHHHHhcccccc---ccCceecccccccEEE
Confidence 99999999999999999999986 356899999864 34788888889999999999999 9999999999999999
Q ss_pred cCCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCC-CccchHHHHHHHHHHHhCCCCCC
Q 002250 781 DLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKIN-EKSDVYSFGVVLMELVTGKRPIV 850 (947)
Q Consensus 781 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~slGv~l~elltg~~p~~ 850 (947)
+.+|-+||+|||.|.+...+. .+.++||..|.|||++.+.+|- ..-||||+|+++|.++....||+
T Consensus 704 d~~g~~klidfgsaa~~ksgp----fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 704 DSNGFVKLIDFGSAAYTKSGP----FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred ecCCeEEEeeccchhhhcCCC----cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 999999999999998765543 3467899999999999988864 56899999999999999988874
No 407
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.94 E-value=8.2e-26 Score=232.75 Aligned_cols=212 Identities=38% Similarity=0.543 Sum_probs=182.2
Q ss_pred ccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEEEEecCC
Q 002250 637 IGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYCSITSED 715 (947)
Q Consensus 637 iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 715 (947)
||+|++|.||++... +++.+++|++...... .....+.+|++.++.++|++++++++++....
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~----------------~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~ 64 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSS----------------SLLEELLREIEILKKLNHPNIVKLYGVFEDEN 64 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccch----------------hHHHHHHHHHHHHHhcCCCCeeeEeeeeecCC
Confidence 689999999999976 4899999998422110 03467899999999999999999999999999
Q ss_pred ccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecC-CCCeEEeccccc
Q 002250 716 SNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDL-EWKPRIADFGLA 794 (947)
Q Consensus 716 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~DfG~a 794 (947)
..++++||+++++|.+++.... ...++..+..++.+++++++||| +.+++|+||+|.||+++. ++.++|+|||.+
T Consensus 65 ~~~~~~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh---~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~ 140 (215)
T cd00180 65 HLYLVMEYCEGGSLKDLLKENE-GKLSEDEILRILLQILEGLEYLH---SNGIIHRDLKPENILLDSDNGKVKLADFGLS 140 (215)
T ss_pred eEEEEEecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHhhEEEeCCCCcEEEecCCce
Confidence 9999999999999999998642 45889999999999999999999 889999999999999999 899999999999
Q ss_pred eecccCCCCcceecccccccccCccccccC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhccccccc
Q 002250 795 KIVQTGEAGDLTHVIAGTHGYIAPEYAYTC-KINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDSRDSM 873 (947)
Q Consensus 795 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 873 (947)
........ ......+...|++||..... .++.++|+|++|+++++|
T Consensus 141 ~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------------------------- 187 (215)
T cd00180 141 KLLTSDKS--LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------------------------- 187 (215)
T ss_pred EEccCCcc--hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------
Confidence 86654321 12234578899999999877 788999999999999999
Q ss_pred cccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 002250 874 LTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQML 917 (947)
Q Consensus 874 ~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L 917 (947)
..+.+++..|++.+|++||++.++++.+
T Consensus 188 ----------------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 ----------------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred ----------------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 4578889999999999999999998753
No 408
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.93 E-value=1.7e-26 Score=231.00 Aligned_cols=258 Identities=23% Similarity=0.267 Sum_probs=191.2
Q ss_pred hhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccce
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVK 706 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 706 (947)
..+|.....+|.|.- .|..|... .+++||+|++-.. ........+..+|..++..++|+||++
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~p---------------f~n~~~akra~rel~l~~~v~~~nii~ 79 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRP---------------FQNQTHAKRAYRELKLMKCVNHKNIIS 79 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCc---------------cccCccchhhhhhhhhhhhhcccceee
Confidence 457777888999988 56666533 6899999987322 111234466788999999999999999
Q ss_pred EEEEEecCC------ccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEe
Q 002250 707 LYCSITSED------SNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILL 780 (947)
Q Consensus 707 l~~~~~~~~------~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll 780 (947)
++.+|.... ..|+||||| .++|...+.- .++-.+...+..|+..|+.||| +.+|+||||||+||++
T Consensus 80 l~n~ftP~~~l~~~~e~y~v~e~m-~~nl~~vi~~----elDH~tis~i~yq~~~~ik~lh---s~~IihRdLkPsnivv 151 (369)
T KOG0665|consen 80 LLNVFTPQKTLEEFQEVYLVMELM-DANLCQVILM----ELDHETISYILYQMLCGIKHLH---SAGIIHRDLKPSNIVV 151 (369)
T ss_pred eeeccCccccHHHHHhHHHHHHhh-hhHHHHHHHH----hcchHHHHHHHHHHHHHHHHHH---hcceeecccCccccee
Confidence 999986543 469999999 5688888872 4677788889999999999999 9999999999999999
Q ss_pred cCCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHH
Q 002250 781 DLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIV 860 (947)
Q Consensus 781 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~ 860 (947)
..+..+||.|||+|+..... -..+-.+.|..|.|||++.+..+.+.+||||.||++.||++|+.-|.+. ..+.
T Consensus 152 ~~~~~lKi~dfg~ar~e~~~---~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~----d~id 224 (369)
T KOG0665|consen 152 NSDCTLKILDFGLARTEDTD---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGK----DHID 224 (369)
T ss_pred cchhheeeccchhhcccCcc---cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCc----hHHH
Confidence 99999999999999865443 1233446789999999999888999999999999999999999887432 2222
Q ss_pred HHHHh---------------------hccccccc-cccccCCC--------CccCHHHHHHHHHHHHhccCCCCCCCCCH
Q 002250 861 NWVYS---------------------KMDSRDSM-LTVVDPNI--------SEILKEDALKVLRIAIHCTNKLPAFRPSM 910 (947)
Q Consensus 861 ~~~~~---------------------~~~~~~~~-~~~~d~~~--------~~~~~~~~~~l~~l~~~cl~~dP~~RPt~ 910 (947)
+|... .....+.. ...+...+ .+...-......+++.+|+-.+|++|-++
T Consensus 225 Q~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv 304 (369)
T KOG0665|consen 225 QWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISV 304 (369)
T ss_pred HHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccH
Confidence 22111 11111100 01111111 11122233446678889999999999999
Q ss_pred HHHHHH
Q 002250 911 RVVVQM 916 (947)
Q Consensus 911 ~ev~~~ 916 (947)
++++++
T Consensus 305 ~daL~H 310 (369)
T KOG0665|consen 305 DDALRH 310 (369)
T ss_pred HHHhcC
Confidence 999975
No 409
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.93 E-value=2e-26 Score=239.82 Aligned_cols=265 Identities=24% Similarity=0.296 Sum_probs=198.7
Q ss_pred HHHhhccCCcccccccCceeEEEEEeC----CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-
Q 002250 625 KEIIDAVKPENLIGKGGSGNVYKVVLN----SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV- 699 (947)
Q Consensus 625 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l- 699 (947)
..+.+.|..+++||+|+|++||+|... ..+.||+|.+. ......++..|++++..+
T Consensus 32 p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~-------------------~ts~p~ri~~El~~L~~~g 92 (418)
T KOG1167|consen 32 PFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIY-------------------RTSSPSRILNELEMLYRLG 92 (418)
T ss_pred hhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecc-------------------cccCchHHHHHHHHHHHhc
Confidence 345578999999999999999999843 36789999883 224556789999999999
Q ss_pred cccccceEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeE
Q 002250 700 RHVNVVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNIL 779 (947)
Q Consensus 700 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIl 779 (947)
.+.||+++.+++..++.+.+|+||++.....++... ++..........+..||+|+| .+|||||||||+|++
T Consensus 93 G~~ni~~~~~~~rnnd~v~ivlp~~~H~~f~~l~~~-----l~~~~i~~Yl~~ll~Al~~~h---~~GIvHRDiKpsNFL 164 (418)
T KOG1167|consen 93 GSDNIIKLNGCFRNNDQVAIVLPYFEHDRFRDLYRS-----LSLAEIRWYLRNLLKALAHLH---KNGIVHRDIKPSNFL 164 (418)
T ss_pred cchhhhcchhhhccCCeeEEEecccCccCHHHHHhc-----CCHHHHHHHHHHHHHHhhhhh---ccCccccCCCccccc
Confidence 589999999999999999999999999888888876 567778888999999999999 899999999999999
Q ss_pred ecC-CCCeEEeccccceecccCC-------------CC------------------c-----------ceeccccccccc
Q 002250 780 LDL-EWKPRIADFGLAKIVQTGE-------------AG------------------D-----------LTHVIAGTHGYI 816 (947)
Q Consensus 780 l~~-~~~~kl~DfG~a~~~~~~~-------------~~------------------~-----------~~~~~~gt~~y~ 816 (947)
.+. .+.-.|.|||+|....... .. . ......||+||.
T Consensus 165 ~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfR 244 (418)
T KOG1167|consen 165 YNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFR 244 (418)
T ss_pred cccccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCC
Confidence 985 4778999999996211000 00 0 001245999999
Q ss_pred CccccccCC-CCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc----------cccccccc----------
Q 002250 817 APEYAYTCK-INEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKM----------DSRDSMLT---------- 875 (947)
Q Consensus 817 aPE~~~~~~-~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~----------~~~~~~~~---------- 875 (947)
|||++.... .++++||||.||++.-+++++.||.....+-..+.+.+.... .+...+.+
T Consensus 245 aPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~ 324 (418)
T KOG1167|consen 245 APEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPEL 324 (418)
T ss_pred chHHHhhccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHH
Confidence 999997654 678999999999999999999999766555444444332211 01100000
Q ss_pred -----ccc-CCC----------CccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 876 -----VVD-PNI----------SEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 876 -----~~d-~~~----------~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
-++ ..+ ....+..+..++++..+|++.||.+|.|+++.+++
T Consensus 325 ~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 325 RVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred HhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 000 000 01111223468899999999999999999999864
No 410
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.93 E-value=6.7e-27 Score=253.94 Aligned_cols=253 Identities=26% Similarity=0.317 Sum_probs=196.5
Q ss_pred hhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccce
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVK 706 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 706 (947)
.++|.....+|.|+||.||||+.. .++..|||+++-. ......-.+.|+-+++..+|||||.
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLe-----------------p~dd~~~iqqei~~~~dc~h~niva 76 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLE-----------------PGDDFSGIQQEIGMLRDCRHPNIVA 76 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeecc-----------------CCccccccccceeeeecCCCcChHH
Confidence 478899999999999999999954 7899999998421 2244556778999999999999999
Q ss_pred EEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCe
Q 002250 707 LYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKP 786 (947)
Q Consensus 707 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 786 (947)
++|.+...+..++.|||+.+|+|++.-+.. .++++.+.--++....+|++||| +++-+|||||-.||++++.|.+
T Consensus 77 y~gsylr~dklwicMEycgggslQdiy~~T--gplselqiayvcRetl~gl~ylh---s~gk~hRdiKGanilltd~gDv 151 (829)
T KOG0576|consen 77 YFGSYLRRDKLWICMEYCGGGSLQDIYHVT--GPLSELQIAYVCRETLQGLKYLH---SQGKIHRDIKGANILLTDEGDV 151 (829)
T ss_pred HHhhhhhhcCcEEEEEecCCCcccceeeec--ccchhHHHHHHHhhhhccchhhh---cCCcccccccccceeecccCce
Confidence 999999999999999999999999988763 35777777778889999999999 8999999999999999999999
Q ss_pred EEeccccceecccCCCCcceecccccccccCcccc---ccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHH
Q 002250 787 RIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYA---YTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWV 863 (947)
Q Consensus 787 kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~ 863 (947)
|++|||.+..+...- .....+.||+.|||||+. +.+.|...+|||+.|+...|+-.-++|.+.... .+-.
T Consensus 152 klaDfgvsaqitati--~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhp-----mr~l 224 (829)
T KOG0576|consen 152 KLADFGVSAQITATI--AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHP-----MRAL 224 (829)
T ss_pred eecccCchhhhhhhh--hhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccch-----HHHH
Confidence 999999986543322 123356899999999987 456689999999999999999988888532211 1110
Q ss_pred HhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 864 YSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 864 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
+-.- ...+++...+-.....+.+-.++..|+.++|.+||++...+.
T Consensus 225 ~LmT------kS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 225 FLMT------KSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred HHhh------ccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 0000 111122111122233455778888999999999999876543
No 411
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.93 E-value=6.1e-25 Score=229.03 Aligned_cols=199 Identities=32% Similarity=0.476 Sum_probs=169.5
Q ss_pred cCCcccccccCceeEEEEEeCC-CcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEE
Q 002250 631 VKPENLIGKGGSGNVYKVVLNS-GKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYC 709 (947)
Q Consensus 631 ~~~~~~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 709 (947)
|+..+.||+|++|.||+|.... ++.+|+|.+...... .....+.+|++.+++++|+|++++++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~----------------~~~~~~~~e~~~~~~~~~~~i~~~~~ 64 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE----------------KQREEFLREIRILKKLKHPNIVKLYG 64 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch----------------HHHHHHHHHHHHHHhCCCCChhhhee
Confidence 4567889999999999999774 899999998422110 13567889999999999999999999
Q ss_pred EEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEe
Q 002250 710 SITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIA 789 (947)
Q Consensus 710 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 789 (947)
++......++++||+++++|.+++..... .+++.....++.+++.++.||| ..+++|+|++|+||+++.++.++|+
T Consensus 65 ~~~~~~~~~~v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~di~~~ni~v~~~~~~~l~ 140 (225)
T smart00221 65 VFEDPEPLYLVMEYCEGGDLFDYLRKKGG-KLSEEEARFYLRQILEALEYLH---SLGIVHRDLKPENILLGMDGLVKLA 140 (225)
T ss_pred eeecCCceEEEEeccCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEe
Confidence 99999999999999999999999987432 2789999999999999999999 7899999999999999999999999
Q ss_pred ccccceecccCCCCcceecccccccccCcccc-ccCCCCCccchHHHHHHHHHHHhCCCCCC
Q 002250 790 DFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYA-YTCKINEKSDVYSFGVVLMELVTGKRPIV 850 (947)
Q Consensus 790 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~slGv~l~elltg~~p~~ 850 (947)
|||.+......... ......++..|++||.. ....++.++|||+||++++||++|+.||.
T Consensus 141 d~g~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~ 201 (225)
T smart00221 141 DFGLARFIHRDLAA-LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFS 201 (225)
T ss_pred eCceeeEecCcccc-cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCcc
Confidence 99999876554311 12234678899999998 56667889999999999999999999984
No 412
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.92 E-value=2.9e-26 Score=241.69 Aligned_cols=201 Identities=23% Similarity=0.261 Sum_probs=167.8
Q ss_pred HHHhhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcc---
Q 002250 625 KEIIDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVR--- 700 (947)
Q Consensus 625 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--- 700 (947)
+.+-.+|.+....|+|-|++|.+|... -|+.||||+|.-.. ...+.=.+|+++|++|+
T Consensus 428 E~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE------------------~M~KtGl~EleiLkKL~~AD 489 (752)
T KOG0670|consen 428 ELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE------------------VMHKTGLKELEILKKLNDAD 489 (752)
T ss_pred hhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch------------------HHhhhhhHHHHHHHHhhccC
Confidence 445578999999999999999999954 58899999994221 12233357999999995
Q ss_pred ---ccccceEEEEEecCCccEEEEeccCCCChHHHhhhcC-CccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCC
Q 002250 701 ---HVNVVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCH-KIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSS 776 (947)
Q Consensus 701 ---h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~ 776 (947)
--|.++++..|....++|||+|-+ ..+|.+.+++.+ ...+....+..++.|+.-||..|. ..+|+|.||||.
T Consensus 490 ~Edk~Hclrl~r~F~hknHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK---~c~vlHaDIKPD 565 (752)
T KOG0670|consen 490 PEDKFHCLRLFRHFKHKNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLK---KCGVLHADIKPD 565 (752)
T ss_pred chhhhHHHHHHHHhhhcceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHH---hcCeeecccCcc
Confidence 248899999999999999999998 569999999875 356788889999999999999999 889999999999
Q ss_pred CeEecCC-CCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCC
Q 002250 777 NILLDLE-WKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVP 851 (947)
Q Consensus 777 NIll~~~-~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~ 851 (947)
|||+.+. ..+||||||.|......+.... .-+..|.|||++.+-.|+...|+||.||.+||+.||+..|.+
T Consensus 566 NiLVNE~k~iLKLCDfGSA~~~~eneitPY----LVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG 637 (752)
T KOG0670|consen 566 NILVNESKNILKLCDFGSASFASENEITPY----LVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPG 637 (752)
T ss_pred ceEeccCcceeeeccCccccccccccccHH----HHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCC
Confidence 9999865 5689999999987665543221 235689999999999999999999999999999999988843
No 413
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.92 E-value=1.8e-24 Score=273.66 Aligned_cols=340 Identities=19% Similarity=0.230 Sum_probs=257.2
Q ss_pred CCccCCCCCCCCEEECcCcc------cccccCccccCCC-CCcEEEeecccccccCCccCCCCCCccEEeccCCCCCCCC
Q 002250 174 IPEGIGNLTQLQNLELSDNE------LFGEIPAGIVKLN-KLWQLELYNNSLSGRLPVGFSNLTNLMNFDVSQNRLEGDL 246 (947)
Q Consensus 174 ~p~~~~~l~~L~~L~Ls~N~------l~~~~~~~l~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 246 (947)
.+..|.++++|+.|.+..+. +...+|..|..++ +|+.|++.+|.++ .+|..| ...+|++|+|++|++...+
T Consensus 550 ~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~~L~ 627 (1153)
T PLN03210 550 HENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLEKLW 627 (1153)
T ss_pred cHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCccccccc
Confidence 34567788888888886653 2234566666664 5888888888887 667666 4688888888888888777
Q ss_pred ccccccCCCCEEEccCccCcccCCCCccCCCcCcEEEccCccccccCCcCccCcccccccccccccccCCCCCCcccCCc
Q 002250 247 SELRFLNQLSSLHLFENQFSGEIPEEFGEFKHLTELSLYTNRLTGTLPQKLGSWADFNYVDVSENLLTGPIPPDMCKTGA 326 (947)
Q Consensus 247 ~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ 326 (947)
..+..+++|+.|+|+++.....+| .++.+++|+.|+|++|.....+|..++.+++|+.|++++|.....+|..+ .+.+
T Consensus 628 ~~~~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~s 705 (1153)
T PLN03210 628 DGVHSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKS 705 (1153)
T ss_pred cccccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCC
Confidence 777788888888888776444566 47778888888888877666888888888888888888876555677655 6778
Q ss_pred cceeeecccccCCcCCccccCCCCccEEEcccccccccCCCCCCCCCCcceeccccCCcC-------CCCCCcccccccc
Q 002250 327 MTDLLVLQNNFNGTVPETYANCKSLIRFRVNNNSLSGTIPPGIWSLPNLSIIDLSTNQFE-------GPVTDDIGNAKSL 399 (947)
Q Consensus 327 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~-------~~~~~~~~~l~~L 399 (947)
|+.|.+.+|...+.+|.. ..+|+.|++++|.+. .+|..+ .+++|+.|++.++... ...+..+..+++|
T Consensus 706 L~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL 780 (1153)
T PLN03210 706 LYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSL 780 (1153)
T ss_pred CCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchhhccccccccchhhhhccccc
Confidence 888888888777777754 357888899999987 566655 5788888888764422 1222233445789
Q ss_pred cEEEccCccccccCCCCCCCCCcceEEEcccCcccCCCCcccccccccchhhccccccCCCCCcccccccccceeeccCc
Q 002250 400 ALLLLANNRFSGELPSKISEASSLVSIQLSLNQFSGQIPLDIGKLKKLSSLYLHDNMFSGPLPYSIGSCVSLTDINFAQN 479 (947)
Q Consensus 400 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 479 (947)
+.|+|++|...+.+|..++++++|+.|++++|...+.+|..+ ++++|+.|+|++|.....+|.. .++|+.|+|++|
T Consensus 781 ~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n 856 (1153)
T PLN03210 781 TRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRT 856 (1153)
T ss_pred hheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEeECCCC
Confidence 999999998877899999999999999999876555778766 7889999999998655555543 367889999999
Q ss_pred eeeeecCCCCCccCcCcEEECCC-CccCCccCCcccccccceeeCCCCc
Q 002250 480 SLSGKIPDSLGSLPSLNSLNLSN-NKFSGEIPISLTYPKLSLLDLSNNQ 527 (947)
Q Consensus 480 ~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~~~L~~L~ls~N~ 527 (947)
.++ .+|..+..+++|+.|+|++ |++++.++....+++|+.++++++.
T Consensus 857 ~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 857 GIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred CCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCCc
Confidence 998 7888899999999999988 5676544444456888889988874
No 414
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.91 E-value=1.4e-26 Score=237.12 Aligned_cols=275 Identities=21% Similarity=0.204 Sum_probs=192.6
Q ss_pred ccceeeccCccccCcCchhhhcCCCccEEeCcCccCcCCCCC-cccccccceeecCC-CCccCccCcccccccCCCceee
Q 002250 62 ALQKINLGTNFLYGTITEGLKSCTRLQVLDLGNNSFSGEVPD-LSMLHELSFLNLNS-SGISGKFPWKSLENLTNLEFLS 139 (947)
Q Consensus 62 ~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~-l~~l~~L~~L~L~~-n~i~~~~~~~~l~~l~~L~~L~ 139 (947)
.-..++|..|+|+.+.+.+|+.+++|+.||||+|.|+.+.|+ |.+|++|..|-+.+ |+|+ .+|...|.+|..|+.|.
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~-~l~k~~F~gL~slqrLl 146 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKIT-DLPKGAFGGLSSLQRLL 146 (498)
T ss_pred cceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchh-hhhhhHhhhHHHHHHHh
Confidence 456788889999888889999999999999999999887665 88888888777766 7887 56668899999999999
Q ss_pred CCCCCCCCCCCChhhcccccCcEEEccCccccccCCccCCCCCCCCEEECcCccc------------ccccCccccCCCC
Q 002250 140 LGDNPFDPSPFPMEVLKLEKLYWLYLTNCSVTGQIPEGIGNLTQLQNLELSDNEL------------FGEIPAGIVKLNK 207 (947)
Q Consensus 140 Ls~n~i~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l------------~~~~~~~l~~l~~ 207 (947)
+.-|++.-.. ...+..+++|..|.+..|.+..+--..|..+.+++.+.+..|.+ ....|..+++..-
T Consensus 147 lNan~i~Cir-~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc 225 (498)
T KOG4237|consen 147 LNANHINCIR-QDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARC 225 (498)
T ss_pred cChhhhcchh-HHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhccccee
Confidence 9888886542 55677888888888888888844444888888888888888872 1223334444444
Q ss_pred CcEEEeecccccccCCccCCCC-CCcc-EEeccCCCCCCCC-ccccccCCCCEEEccCccCcccCCCCccCCCcCcEEEc
Q 002250 208 LWQLELYNNSLSGRLPVGFSNL-TNLM-NFDVSQNRLEGDL-SELRFLNQLSSLHLFENQFSGEIPEEFGEFKHLTELSL 284 (947)
Q Consensus 208 L~~L~L~~n~l~~~~~~~~~~l-~~L~-~L~Ls~N~l~~~~-~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L 284 (947)
..-..+.++++...-+..|... ..+. .+....+.....+ ..|..+++|+.|+|++|+|+.+-+.+|.++..+++|+|
T Consensus 226 ~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L 305 (498)
T KOG4237|consen 226 VSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYL 305 (498)
T ss_pred cchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhc
Confidence 4444455555554434333221 1111 1111111111111 23677778888888888888777778888888888888
Q ss_pred cCccccccCCcCccCcccccccccccccccCCCCCCcccCCccceeeecccccC
Q 002250 285 YTNRLTGTLPQKLGSWADFNYVDVSENLLTGPIPPDMCKTGAMTDLLVLQNNFN 338 (947)
Q Consensus 285 ~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~L~l~~n~~~ 338 (947)
..|+|...--..|.++..|+.|+|.+|+|+..-|..|..+..+.+|.+.+|.+.
T Consensus 306 ~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~ 359 (498)
T KOG4237|consen 306 TRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFN 359 (498)
T ss_pred CcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCccc
Confidence 888887666666777788888888888887777777777777777777776653
No 415
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.91 E-value=2.6e-23 Score=263.22 Aligned_cols=336 Identities=20% Similarity=0.236 Sum_probs=214.2
Q ss_pred hcccccCcEEEccCcc------ccccCCccCCCCC-CCCEEECcCcccccccCccccCCCCCcEEEeecccccccCCccC
Q 002250 154 VLKLEKLYWLYLTNCS------VTGQIPEGIGNLT-QLQNLELSDNELFGEIPAGIVKLNKLWQLELYNNSLSGRLPVGF 226 (947)
Q Consensus 154 ~~~l~~L~~L~L~~n~------l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~ 226 (947)
|.++++|+.|.+.++. +...+|..|..++ +|+.|++.+|.+. .+|..| .+.+|++|+|.+|++. .++..+
T Consensus 554 F~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~ 630 (1153)
T PLN03210 554 FKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWDGV 630 (1153)
T ss_pred HhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-cccccc
Confidence 4455555555554332 2223444454443 4666666666553 445544 3455666666666665 445555
Q ss_pred CCCCCccEEeccCCCCCCCCccccccCCCCEEEccCccCcccCCCCccCCCcCcEEEccCccccccCCcCccCccccccc
Q 002250 227 SNLTNLMNFDVSQNRLEGDLSELRFLNQLSSLHLFENQFSGEIPEEFGEFKHLTELSLYTNRLTGTLPQKLGSWADFNYV 306 (947)
Q Consensus 227 ~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 306 (947)
..+++|+.|+|++|......+.+..+++|+.|+|++|.....+|..+..+++|+.|++++|..-..+|..+ ++++|+.|
T Consensus 631 ~~l~~Lk~L~Ls~~~~l~~ip~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L 709 (1153)
T PLN03210 631 HSLTGLRNIDLRGSKNLKEIPDLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYRL 709 (1153)
T ss_pred ccCCCCCEEECCCCCCcCcCCccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCEE
Confidence 56666666666655433333345556666666666655444566666666666666666654333555544 55666666
Q ss_pred ccccccccCCCCCCcccCCccceeeecccccCCcCCccccCCCCccEEEccccccc-------ccCCCCCCCCCCcceec
Q 002250 307 DVSENLLTGPIPPDMCKTGAMTDLLVLQNNFNGTVPETYANCKSLIRFRVNNNSLS-------GTIPPGIWSLPNLSIID 379 (947)
Q Consensus 307 ~Ls~N~l~~~~p~~~~~~~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~-------~~~p~~~~~l~~L~~L~ 379 (947)
++++|.....+|.. ..+++.|.+.+|.+. .+|..+ .+++|..|.+.++... ...+..+...++|+.|+
T Consensus 710 ~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~ 784 (1153)
T PLN03210 710 NLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLF 784 (1153)
T ss_pred eCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchhhccccccccchhhhhccccchhee
Confidence 66666544444432 234556666666543 344433 4566666666653321 11122233356889999
Q ss_pred cccCCcCCCCCCcccccccccEEEccCccccccCCCCCCCCCcceEEEcccCcccCCCCcccccccccchhhccccccCC
Q 002250 380 LSTNQFEGPVTDDIGNAKSLALLLLANNRFSGELPSKISEASSLVSIQLSLNQFSGQIPLDIGKLKKLSSLYLHDNMFSG 459 (947)
Q Consensus 380 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 459 (947)
|++|...+.+|..++++++|+.|++++|..-+.+|..+ ++++|+.|+|++|.....+|.. .++|+.|+|++|.++
T Consensus 785 Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i~- 859 (1153)
T PLN03210 785 LSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRTGIE- 859 (1153)
T ss_pred CCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEeECCCCCCc-
Confidence 99988777788888899999999998876555777766 7889999999987655556643 367889999999998
Q ss_pred CCCcccccccccceeeccC-ceeeeecCCCCCccCcCcEEECCCCc
Q 002250 460 PLPYSIGSCVSLTDINFAQ-NSLSGKIPDSLGSLPSLNSLNLSNNK 504 (947)
Q Consensus 460 ~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~ 504 (947)
.+|.++..+++|+.|+|++ |+|. .+|..+..+++|+.|++++|.
T Consensus 860 ~iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 860 EVPWWIEKFSNLSFLDMNGCNNLQ-RVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred cChHHHhcCCCCCEEECCCCCCcC-ccCcccccccCCCeeecCCCc
Confidence 6788899999999999998 4665 688888899999999999885
No 416
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.91 E-value=9.5e-25 Score=268.52 Aligned_cols=197 Identities=19% Similarity=0.183 Sum_probs=140.9
Q ss_pred hccc-cccceEEEEE-------ecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeE
Q 002250 698 AVRH-VNVVKLYCSI-------TSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVI 769 (947)
Q Consensus 698 ~l~h-~niv~l~~~~-------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~iv 769 (947)
.++| +||++++++| ...+..+.++||+ +++|.+++... ...+++..+..++.||++||+||| +++|+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH---~~gIv 102 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP-DRSVDAFECFHVFRQIVEIVNAAH---SQGIV 102 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc-cccccHHHHHHHHHHHHHHHHHHH---hCCee
Confidence 4556 6888888887 2334567888988 66999999753 346899999999999999999999 89999
Q ss_pred eccCCCCCeEecC-------------------CCCeEEeccccceecccCCC--------------Ccceeccccccccc
Q 002250 770 HRDVKSSNILLDL-------------------EWKPRIADFGLAKIVQTGEA--------------GDLTHVIAGTHGYI 816 (947)
Q Consensus 770 H~Dlkp~NIll~~-------------------~~~~kl~DfG~a~~~~~~~~--------------~~~~~~~~gt~~y~ 816 (947)
||||||+|||++. ++.+|++|||+++....... ........||+.||
T Consensus 103 HrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 182 (793)
T PLN00181 103 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYT 182 (793)
T ss_pred eccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceE
Confidence 9999999999954 44566777777653211000 00011235788999
Q ss_pred CccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHH
Q 002250 817 APEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIA 896 (947)
Q Consensus 817 aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~ 896 (947)
|||++.+..++.++|||||||++|||++|..|+.... ..+...... ...+ ...........++
T Consensus 183 APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~---~~~~~~~~~----------~~~~----~~~~~~~~~~~~~ 245 (793)
T PLN00181 183 SPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS---RTMSSLRHR----------VLPP----QILLNWPKEASFC 245 (793)
T ss_pred ChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH---HHHHHHHHh----------hcCh----hhhhcCHHHHHHH
Confidence 9999999999999999999999999999988863211 001111000 0011 1111223456788
Q ss_pred HhccCCCCCCCCCHHHHHHH
Q 002250 897 IHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 897 ~~cl~~dP~~RPt~~ev~~~ 916 (947)
.+|++.+|.+||+|.|++++
T Consensus 246 ~~~L~~~P~~Rps~~eil~h 265 (793)
T PLN00181 246 LWLLHPEPSCRPSMSELLQS 265 (793)
T ss_pred HHhCCCChhhCcChHHHhhc
Confidence 89999999999999999864
No 417
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.90 E-value=1.2e-23 Score=246.07 Aligned_cols=123 Identities=28% Similarity=0.377 Sum_probs=71.6
Q ss_pred CcceeccccCCcCCCCCCcccccccccEEEccCccccccCCCCCCCCCcceEEEcccCcccCCCCcccccccccchhhcc
Q 002250 374 NLSIIDLSTNQFEGPVTDDIGNAKSLALLLLANNRFSGELPSKISEASSLVSIQLSLNQFSGQIPLDIGKLKKLSSLYLH 453 (947)
Q Consensus 374 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 453 (947)
+|+.|+|++|+|++. |.. ..+|+.|++++|+|+ .+|.. ..+|+.|++++|+|+ .+|.. .++|+.|+++
T Consensus 343 ~Lq~LdLS~N~Ls~L-P~l---p~~L~~L~Ls~N~L~-~LP~l---~~~L~~LdLs~N~Lt-~LP~l---~s~L~~LdLS 410 (788)
T PRK15387 343 GLQELSVSDNQLASL-PTL---PSELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLT-SLPVL---PSELKELMVS 410 (788)
T ss_pred ccceEecCCCccCCC-CCC---Ccccceehhhccccc-cCccc---ccccceEEecCCccc-CCCCc---ccCCCEEEcc
Confidence 455555555555532 221 234555555555555 34432 235666666666666 34432 2456666777
Q ss_pred ccccCCCCCcccccccccceeeccCceeeeecCCCCCccCcCcEEECCCCccCCccCCcc
Q 002250 454 DNMFSGPLPYSIGSCVSLTDINFAQNSLSGKIPDSLGSLPSLNSLNLSNNKFSGEIPISL 513 (947)
Q Consensus 454 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 513 (947)
+|+|++ +|.. ..+|+.|+|++|+|+ .+|..++++++|+.|+|++|+|++.+|..+
T Consensus 411 ~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L 465 (788)
T PRK15387 411 GNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQAL 465 (788)
T ss_pred CCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHH
Confidence 776663 4432 235666777777776 677777777777777777777777665543
No 418
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.90 E-value=6.1e-26 Score=232.53 Aligned_cols=276 Identities=18% Similarity=0.216 Sum_probs=202.6
Q ss_pred cCcEEEccCccccccCCccCCCCCCCCEEECcCcccccccCccccCCCCCcEEEeec-ccccccCCccCCCCCCccEEec
Q 002250 159 KLYWLYLTNCSVTGQIPEGIGNLTQLQNLELSDNELFGEIPAGIVKLNKLWQLELYN-NSLSGRLPVGFSNLTNLMNFDV 237 (947)
Q Consensus 159 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L~L 237 (947)
.-..++|..|+|+.+.|.+|+.+++|+.||||+|+|+.+.|++|.++++|.+|-+.+ |+|+......|.+|.+|+.|.+
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLll 147 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLL 147 (498)
T ss_pred cceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhc
Confidence 345677777777766677788888888888888888777788888887776666655 7787666667888888888888
Q ss_pred cCCCCCCCCc-cccccCCCCEEEccCccCcccCCCCccCCCcCcEEEccCccc------------cccCCcCccCccccc
Q 002250 238 SQNRLEGDLS-ELRFLNQLSSLHLFENQFSGEIPEEFGEFKHLTELSLYTNRL------------TGTLPQKLGSWADFN 304 (947)
Q Consensus 238 s~N~l~~~~~-~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l------------~~~~p~~l~~l~~L~ 304 (947)
.-|++..... .|..+++|..|.|..|.+..+--..|..+..++.+.+..|.+ ....|..++...-..
T Consensus 148 Nan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~ 227 (498)
T KOG4237|consen 148 NANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVS 227 (498)
T ss_pred ChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceecc
Confidence 8887776553 577777888888888887743334777788888888887772 223444555555555
Q ss_pred ccccccccccCCCCCCcccC-CccceeeecccccCCcCC-ccccCCCCccEEEcccccccccCCCCCCCCCCcceecccc
Q 002250 305 YVDVSENLLTGPIPPDMCKT-GAMTDLLVLQNNFNGTVP-ETYANCKSLIRFRVNNNSLSGTIPPGIWSLPNLSIIDLST 382 (947)
Q Consensus 305 ~L~Ls~N~l~~~~p~~~~~~-~~l~~L~l~~n~~~~~~p-~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~ 382 (947)
...+.++++..+-+..+... ..+..-.....+..+.-| ..|..+++|++|+|++|+|+.+.+.+|..+..++.|.|..
T Consensus 228 p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~ 307 (498)
T KOG4237|consen 228 PYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTR 307 (498)
T ss_pred hHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCc
Confidence 55666666654333333221 122222223333444555 6789999999999999999999999999999999999999
Q ss_pred CCcCCCCCCcccccccccEEEccCccccccCCCCCCCCCcceEEEcccCccc
Q 002250 383 NQFEGPVTDDIGNAKSLALLLLANNRFSGELPSKISEASSLVSIQLSLNQFS 434 (947)
Q Consensus 383 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 434 (947)
|+|..+-...|.++..|+.|+|.+|+|+..-|.+|..+..|.+|+|-.|.+.
T Consensus 308 N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~ 359 (498)
T KOG4237|consen 308 NKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFN 359 (498)
T ss_pred chHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCccc
Confidence 9998887888999999999999999999888999999999999999888754
No 419
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.90 E-value=2.3e-23 Score=243.86 Aligned_cols=266 Identities=26% Similarity=0.339 Sum_probs=179.6
Q ss_pred cCcEEEccCccccccCCccCCCCCCCCEEECcCcccccccCccccCCCCCcEEEeecccccccCCccCCCCCCccEEecc
Q 002250 159 KLYWLYLTNCSVTGQIPEGIGNLTQLQNLELSDNELFGEIPAGIVKLNKLWQLELYNNSLSGRLPVGFSNLTNLMNFDVS 238 (947)
Q Consensus 159 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 238 (947)
+-..|+|++|.++ .+|..+. ++|+.|++++|+|+ .+|.. +++|++|+|++|+|+. +|.. .++|+.|+|+
T Consensus 202 ~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~Lts-LP~l---p~sL~~L~Ls 270 (788)
T PRK15387 202 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLTS-LPVL---PPGLLELSIF 270 (788)
T ss_pred CCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccCc-ccCc---ccccceeecc
Confidence 3556777777776 4566554 36777777777776 34432 4567777777777773 4432 3566777777
Q ss_pred CCCCCCCCccccccCCCCEEEccCccCcccCCCCccCCCcCcEEEccCccccccCCcCccCcccccccccccccccCCCC
Q 002250 239 QNRLEGDLSELRFLNQLSSLHLFENQFSGEIPEEFGEFKHLTELSLYTNRLTGTLPQKLGSWADFNYVDVSENLLTGPIP 318 (947)
Q Consensus 239 ~N~l~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p 318 (947)
+|.++.++.. +.+|+.|+|++|+++ .+|.. .++|+.|+|++|+++ .+|... .+|+.|++++|.+++ +|
T Consensus 271 ~N~L~~Lp~l---p~~L~~L~Ls~N~Lt-~LP~~---p~~L~~LdLS~N~L~-~Lp~lp---~~L~~L~Ls~N~L~~-LP 338 (788)
T PRK15387 271 SNPLTHLPAL---PSGLCKLWIFGNQLT-SLPVL---PPGLQELSVSDNQLA-SLPALP---SELCKLWAYNNQLTS-LP 338 (788)
T ss_pred CCchhhhhhc---hhhcCEEECcCCccc-ccccc---ccccceeECCCCccc-cCCCCc---ccccccccccCcccc-cc
Confidence 7776654432 245667777777776 34432 356777777777776 344422 345666666666652 33
Q ss_pred CCcccCCccceeeecccccCCcCCccccCCCCccEEEcccccccccCCCCCCCCCCcceeccccCCcCCCCCCccccccc
Q 002250 319 PDMCKTGAMTDLLVLQNNFNGTVPETYANCKSLIRFRVNNNSLSGTIPPGIWSLPNLSIIDLSTNQFEGPVTDDIGNAKS 398 (947)
Q Consensus 319 ~~~~~~~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 398 (947)
. . ..+|+.|+|++|+|+ .+|.. .++|+.|++++|+|+. +|.. +.+
T Consensus 339 ~------------------------l---p~~Lq~LdLS~N~Ls-~LP~l---p~~L~~L~Ls~N~L~~-LP~l---~~~ 383 (788)
T PRK15387 339 T------------------------L---PSGLQELSVSDNQLA-SLPTL---PSELYKLWAYNNRLTS-LPAL---PSG 383 (788)
T ss_pred c------------------------c---ccccceEecCCCccC-CCCCC---Ccccceehhhcccccc-Cccc---ccc
Confidence 1 0 135777888888887 34543 2467778888888875 4432 356
Q ss_pred ccEEEccCccccccCCCCCCCCCcceEEEcccCcccCCCCcccccccccchhhccccccCCCCCcccccccccceeeccC
Q 002250 399 LALLLLANNRFSGELPSKISEASSLVSIQLSLNQFSGQIPLDIGKLKKLSSLYLHDNMFSGPLPYSIGSCVSLTDINFAQ 478 (947)
Q Consensus 399 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 478 (947)
|+.|++++|+|+ .+|.. .++|+.|++++|+|+ .+|.. ..+|+.|+|++|+|+ .+|..+..+++|+.|+|++
T Consensus 384 L~~LdLs~N~Lt-~LP~l---~s~L~~LdLS~N~Ls-sIP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~ 454 (788)
T PRK15387 384 LKELIVSGNRLT-SLPVL---PSELKELMVSGNRLT-SLPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEG 454 (788)
T ss_pred cceEEecCCccc-CCCCc---ccCCCEEEccCCcCC-CCCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCC
Confidence 888899999888 46643 357889999999998 46753 356888999999998 6888999999999999999
Q ss_pred ceeeeecCCCCCc
Q 002250 479 NSLSGKIPDSLGS 491 (947)
Q Consensus 479 N~l~~~~p~~~~~ 491 (947)
|+|++..|..+..
T Consensus 455 N~Ls~~~~~~L~~ 467 (788)
T PRK15387 455 NPLSERTLQALRE 467 (788)
T ss_pred CCCCchHHHHHHH
Confidence 9999887776533
No 420
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.90 E-value=3.7e-23 Score=206.70 Aligned_cols=167 Identities=22% Similarity=0.211 Sum_probs=126.8
Q ss_pred CChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEeccccceecccCCCCcce
Q 002250 727 GSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFGLAKIVQTGEAGDLT 806 (947)
Q Consensus 727 gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~ 806 (947)
|+|.++++.. ...+++..+..++.|++.||+||| +.+ ||+||+++.++.+|+ ||.+.......
T Consensus 1 GsL~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~lH---~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~----- 63 (176)
T smart00750 1 VSLADILEVR-GRPLNEEEIWAVCLQCLRALRELH---RQA------KSGNILLTWDGLLKL--DGSVAFKTPEQ----- 63 (176)
T ss_pred CcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHH---hcC------CcccEeEcCccceee--ccceEeecccc-----
Confidence 6899999863 346899999999999999999999 555 999999999999999 99998654422
Q ss_pred ecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhccccccccccccCCCCccCH
Q 002250 807 HVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILK 886 (947)
Q Consensus 807 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 886 (947)
..||+.|||||++.+..++.++|||||||++|||+||+.||.........+..+..... .. ++.-.....
T Consensus 64 --~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~-~~-------~~~~~~~~~ 133 (176)
T smart00750 64 --SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMP-AD-------DPRDRSNLE 133 (176)
T ss_pred --CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhc-cC-------CccccccHH
Confidence 25889999999999999999999999999999999999998543222222222111111 00 001011122
Q ss_pred HHHH--HHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 002250 887 EDAL--KVLRIAIHCTNKLPAFRPSMRVVVQMLEEA 920 (947)
Q Consensus 887 ~~~~--~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 920 (947)
.... .+.+++.+|++.+|++||++.|+++++...
T Consensus 134 ~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~ 169 (176)
T smart00750 134 SVSAARSFADFMRVCASRLPQRREAANHYLAHCRAL 169 (176)
T ss_pred HHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence 2222 689999999999999999999999988754
No 421
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.90 E-value=1.9e-24 Score=210.32 Aligned_cols=253 Identities=20% Similarity=0.310 Sum_probs=190.1
Q ss_pred ccCCcccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYC 709 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 709 (947)
......+|.+...|+.|+|+++ |..+++|++.... -......+|..|.-.++.+.||||+.++|
T Consensus 191 ~lnl~tkl~e~hsgelwrgrwq-gndivakil~vr~---------------~t~risrdfneefp~lrifshpnilpvlg 254 (448)
T KOG0195|consen 191 SLNLITKLAESHSGELWRGRWQ-GNDIVAKILNVRE---------------VTARISRDFNEEFPALRIFSHPNILPVLG 254 (448)
T ss_pred hhhhhhhhccCCCccccccccc-Ccchhhhhhhhhh---------------cchhhcchhhhhCcceeeecCCchhhhhh
Confidence 3445567889999999999998 6667778773211 11223467899999999999999999999
Q ss_pred EEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEe
Q 002250 710 SITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIA 789 (947)
Q Consensus 710 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 789 (947)
.|..+....++..||+.|+|...++.......+..+..+++.++|+|++|||+- ++-|----+.+..|++|++.+++|+
T Consensus 255 acnsppnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltaris 333 (448)
T KOG0195|consen 255 ACNSPPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARIS 333 (448)
T ss_pred hccCCCCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhhee
Confidence 999999999999999999999999998888888899999999999999999952 2334445689999999999888774
Q ss_pred ccccceecccCCCCcceecccccccccCccccccCCCC---CccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhh
Q 002250 790 DFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKIN---EKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSK 866 (947)
Q Consensus 790 DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~---~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 866 (947)
= +-+++.... ....-.+.||+||.+....-+ .++|+|||++++||+.|...||..-..
T Consensus 334 m-ad~kfsfqe------~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlsp------------ 394 (448)
T KOG0195|consen 334 M-ADTKFSFQE------VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSP------------ 394 (448)
T ss_pred c-ccceeeeec------cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCc------------
Confidence 1 111111111 112336889999999776543 578999999999999999999953210
Q ss_pred ccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 002250 867 MDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEA 920 (947)
Q Consensus 867 ~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 920 (947)
++.. +.-.+++....+++.....+.++|.-|++.||.+||.+..|+-.|++.
T Consensus 395 mecg--mkialeglrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm 446 (448)
T KOG0195|consen 395 MECG--MKIALEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKM 446 (448)
T ss_pred hhhh--hhhhhccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHh
Confidence 0000 011122222344555566788889999999999999999999988863
No 422
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.88 E-value=1.1e-22 Score=240.20 Aligned_cols=207 Identities=24% Similarity=0.383 Sum_probs=144.9
Q ss_pred CCccEEeCcCccCcCCCCCcccccccceeecCCCCccCccCcccccccCCCceeeCCCCCCCCCCCChhhcccccCcEEE
Q 002250 85 TRLQVLDLGNNSFSGEVPDLSMLHELSFLNLNSSGISGKFPWKSLENLTNLEFLSLGDNPFDPSPFPMEVLKLEKLYWLY 164 (947)
Q Consensus 85 ~~L~~L~Ls~n~i~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~~l~~L~~L~ 164 (947)
.+.+.|+|+++.++..+..+. ++|+.|+|++|+|+ .+|. .+ .++|++|+|++|.++. +|..+. +.|+.|+
T Consensus 178 ~~~~~L~L~~~~LtsLP~~Ip--~~L~~L~Ls~N~Lt-sLP~-~l--~~nL~~L~Ls~N~Lts--LP~~l~--~~L~~L~ 247 (754)
T PRK15370 178 NNKTELRLKILGLTTIPACIP--EQITTLILDNNELK-SLPE-NL--QGNIKTLYANSNQLTS--IPATLP--DTIQEME 247 (754)
T ss_pred cCceEEEeCCCCcCcCCcccc--cCCcEEEecCCCCC-cCCh-hh--ccCCCEEECCCCcccc--CChhhh--ccccEEE
Confidence 456788888888876655443 46788888888887 3442 22 2578888888888765 344332 4688888
Q ss_pred ccCccccccCCccCCCCCCCCEEECcCcccccccCccccCCCCCcEEEeecccccccCCccCCCCCCccEEeccCCCCCC
Q 002250 165 LTNCSVTGQIPEGIGNLTQLQNLELSDNELFGEIPAGIVKLNKLWQLELYNNSLSGRLPVGFSNLTNLMNFDVSQNRLEG 244 (947)
Q Consensus 165 L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 244 (947)
|++|.+. .+|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|+. +|..+. ++|+.|++++|+++.
T Consensus 248 Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt~ 318 (754)
T PRK15370 248 LSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLTA 318 (754)
T ss_pred CcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCcccc
Confidence 8888887 5666554 47888888888886 4666554 478888888888884 454443 468888888888877
Q ss_pred CCccccccCCCCEEEccCccCcccCCCCccCCCcCcEEEccCccccccCCcCccCcccccccccccccccCCCCC
Q 002250 245 DLSELRFLNQLSSLHLFENQFSGEIPEEFGEFKHLTELSLYTNRLTGTLPQKLGSWADFNYVDVSENLLTGPIPP 319 (947)
Q Consensus 245 ~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~ 319 (947)
.+..+. ++|+.|++++|.+++ +|..+. ++|+.|+|++|+++ .+|..+. ++|+.|+|++|.++ .+|.
T Consensus 319 LP~~l~--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt-~LP~ 384 (754)
T PRK15370 319 LPETLP--PGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALT-NLPE 384 (754)
T ss_pred CCcccc--ccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCC-CCCH
Confidence 655443 578888888888874 565553 67888888888887 5666553 57888888888877 3444
No 423
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.88 E-value=2.4e-22 Score=218.39 Aligned_cols=172 Identities=18% Similarity=0.162 Sum_probs=129.5
Q ss_pred HHHhhccCCcccccccCceeEEEEEeC--CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcccc
Q 002250 625 KEIIDAVKPENLIGKGGSGNVYKVVLN--SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHV 702 (947)
Q Consensus 625 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 702 (947)
..+.+.|.+.+.||+|+||+||+|..+ +++.||||++....... ........|.+|++++++++|+
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~------------~~~~~~~~~~~E~~iL~~L~h~ 81 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWW------------SKPLARHLAAREIRALKTVRGI 81 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEeccccccc------------ccHHHHHHHHHHHHHHHhccCC
Confidence 344578999999999999999999865 57778999873111000 0112235689999999999999
Q ss_pred ccce-EEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccC-CCCCeEe
Q 002250 703 NVVK-LYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDV-KSSNILL 780 (947)
Q Consensus 703 niv~-l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dl-kp~NIll 780 (947)
|+++ ++++ +..|+||||++|++|... .. .. ...++.++++||+||| +.+|+|||| ||+|||+
T Consensus 82 ~iv~~l~~~----~~~~LVmE~~~G~~L~~~-~~-----~~---~~~~~~~i~~aL~~lH---~~gIiHrDL~KP~NILv 145 (365)
T PRK09188 82 GVVPQLLAT----GKDGLVRGWTEGVPLHLA-RP-----HG---DPAWFRSAHRALRDLH---RAGITHNDLAKPQNWLM 145 (365)
T ss_pred CCCcEEEEc----CCcEEEEEccCCCCHHHh-Cc-----cc---hHHHHHHHHHHHHHHH---HCCCeeCCCCCcceEEE
Confidence 9985 4432 457999999999999632 11 11 1356788999999999 899999999 9999999
Q ss_pred cCCCCeEEeccccceecccCCCCcc------eecccccccccCccccccC
Q 002250 781 DLEWKPRIADFGLAKIVQTGEAGDL------THVIAGTHGYIAPEYAYTC 824 (947)
Q Consensus 781 ~~~~~~kl~DfG~a~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~ 824 (947)
+.++.+||+|||+|+.......... -....+++.|+|||++...
T Consensus 146 ~~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 146 GPDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred cCCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 9999999999999987654432111 1245688999999998643
No 424
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.86 E-value=7.2e-21 Score=208.61 Aligned_cols=261 Identities=23% Similarity=0.210 Sum_probs=193.3
Q ss_pred ccCCcccccccCceeEEEEEeCCC--cEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccc----cc
Q 002250 630 AVKPENLIGKGGSGNVYKVVLNSG--KELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRH----VN 703 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~~~--~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h----~n 703 (947)
+|++.+.||+|+||.||.|..... ..+|+|...... ......+..|+.++..+.. ++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~-----------------~~~~~~l~~E~~vl~~l~~~~~~~~ 81 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKEL-----------------GSKPSVLKIEIQVLKKLEKKNGPSH 81 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecc-----------------cCCCccchhHHHHHHHHhhhcCCCC
Confidence 799999999999999999996643 478888763111 1111267789999999873 68
Q ss_pred cceEEEEE-ecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecC
Q 002250 704 VVKLYCSI-TSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDL 782 (947)
Q Consensus 704 iv~l~~~~-~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~ 782 (947)
+.++++.. ..+...|+||+.+ |.+|.+.........++.....+++.|++.+|+++| +.+++||||||.|+++..
T Consensus 82 ~~~~~~~G~~~~~~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH---~~G~iHRDiKp~N~~~g~ 157 (322)
T KOG1164|consen 82 FPKLLDHGRSTEDFNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLH---SKGFIHRDIKPENFVVGQ 157 (322)
T ss_pred CCEEEEeccCCCceeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHH---hcCcccCCcCHHHeeecC
Confidence 99999999 5777889999999 889999887766678999999999999999999999 999999999999999986
Q ss_pred C-----CCeEEeccccceecc--cCCC----Cc-c-eecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCC
Q 002250 783 E-----WKPRIADFGLAKIVQ--TGEA----GD-L-THVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPI 849 (947)
Q Consensus 783 ~-----~~~kl~DfG~a~~~~--~~~~----~~-~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~ 849 (947)
. ..+.+.|||+|+... .... .. . .....||.+|+++....+...+.+.|+||++.++.|+..|..||
T Consensus 158 ~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW 237 (322)
T KOG1164|consen 158 SSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPW 237 (322)
T ss_pred CCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCC
Confidence 5 458999999998322 1111 01 1 22456999999999999999999999999999999999999998
Q ss_pred CCCCCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCC
Q 002250 850 VPEFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAEP 922 (947)
Q Consensus 850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~ 922 (947)
...... ........... ... ... .....+..+.++...+-..+...+|....+...+++...
T Consensus 238 ~~~~~~-~~~~~~~~~~~--~~~----~~~----~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~ 299 (322)
T KOG1164|consen 238 EALEMT-DLKSKFEKDPR--KLL----TDR----FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFD 299 (322)
T ss_pred cccccc-chHHHHHHHhh--hhc----ccc----ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHH
Confidence 432211 11111110000 000 000 111223445555556666889999999999998876543
No 425
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.86 E-value=9.1e-21 Score=190.54 Aligned_cols=200 Identities=23% Similarity=0.322 Sum_probs=171.7
Q ss_pred hccCCcccccccCceeEEEEE-eCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcc-ccccce
Q 002250 629 DAVKPENLIGKGGSGNVYKVV-LNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVR-HVNVVK 706 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~ 706 (947)
..|+++++||+|+||+.+.|+ +-++++||||.= .+..+...+..|.+..+.|. .++|..
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfE-------------------PrkS~APQLrdEYr~YKlL~g~~GIP~ 88 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFE-------------------PRKSEAPQLRDEYRTYKLLGGTEGIPQ 88 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEec-------------------cccCCcchHHHHHHHHHHHcCCCCCCc
Confidence 368999999999999999999 557999999953 22345567888999999885 689999
Q ss_pred EEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCC---
Q 002250 707 LYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLE--- 783 (947)
Q Consensus 707 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~--- 783 (947)
+|-+..++.+-.+|+|.+ |-+|+|++.-|++ .++..++..+|.|++.-++|+| ++..|.|||||+|+||..-
T Consensus 89 vYYFGqeG~~NiLVidLL-GPSLEDLFD~CgR-~FSvKTV~miA~Qmi~rie~vH---~k~LIYRDIKPdNFLIGrp~~k 163 (449)
T KOG1165|consen 89 VYYFGQEGKYNILVIDLL-GPSLEDLFDLCGR-RFSVKTVAMIAKQMITRIEYVH---EKDLIYRDIKPDNFLIGRPGTK 163 (449)
T ss_pred eeeeccccchhhhhhhhh-CcCHHHHHHHhcC-cccHHhHHHHHHHHHHHHHHHH---hcceeecccCccceeecCCCCC
Confidence 988888888888999999 8899999988764 6899999999999999999999 8999999999999999743
Q ss_pred --CCeEEeccccceecccCCCCc-----ceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 002250 784 --WKPRIADFGLAKIVQTGEAGD-----LTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPE 852 (947)
Q Consensus 784 --~~~kl~DfG~a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~ 852 (947)
..+.++|||+|+.+.+..... ......||.+||+--...+.+-+.+.|+=|+|-|+++.+-|..||.+-
T Consensus 164 ~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGL 239 (449)
T KOG1165|consen 164 DANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGL 239 (449)
T ss_pred CCceEEEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccc
Confidence 458999999999887654422 223456999999999999999999999999999999999999999643
No 426
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.84 E-value=4.9e-21 Score=226.21 Aligned_cols=267 Identities=24% Similarity=0.421 Sum_probs=122.1
Q ss_pred CCCEEECcCcccccccCccccCCCCCcEEEeecccccccCCccCCCCCCccEEeccCCCCCCCCccccccCCCCEEEccC
Q 002250 183 QLQNLELSDNELFGEIPAGIVKLNKLWQLELYNNSLSGRLPVGFSNLTNLMNFDVSQNRLEGDLSELRFLNQLSSLHLFE 262 (947)
Q Consensus 183 ~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~L~~ 262 (947)
+|+.|+|++|+|+ .+|..+. .+|++|+|++|+|+ .+|..+. .+|+.|+|++|+++.++..+. .+|+.|+|++
T Consensus 200 ~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~~LP~~l~--s~L~~L~Ls~ 271 (754)
T PRK15370 200 QITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRITELPERLP--SALQSLDLFH 271 (754)
T ss_pred CCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccCcCChhHh--CCCCEEECcC
Confidence 4444444444444 2333322 24455555555544 2333222 245555555555544433332 3455566666
Q ss_pred ccCcccCCCCccCCCcCcEEEccCccccccCCcCccCcccccccccccccccCCCCCCcccCCccceeeecccccCCcCC
Q 002250 263 NQFSGEIPEEFGEFKHLTELSLYTNRLTGTLPQKLGSWADFNYVDVSENLLTGPIPPDMCKTGAMTDLLVLQNNFNGTVP 342 (947)
Q Consensus 263 N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~L~l~~n~~~~~~p 342 (947)
|+|+ .+|..+. ++|+.|+|++|+++ .+|..+. ++|+.|++++|.++. +|..+.
T Consensus 272 N~L~-~LP~~l~--~sL~~L~Ls~N~Lt-~LP~~lp--~sL~~L~Ls~N~Lt~-LP~~l~-------------------- 324 (754)
T PRK15370 272 NKIS-CLPENLP--EELRYLSVYDNSIR-TLPAHLP--SGITHLNVQSNSLTA-LPETLP-------------------- 324 (754)
T ss_pred CccC-ccccccC--CCCcEEECCCCccc-cCcccch--hhHHHHHhcCCcccc-CCcccc--------------------
Confidence 6555 3444332 35666666666665 3444332 356666666666652 232111
Q ss_pred ccccCCCCccEEEcccccccccCCCCCCCCCCcceeccccCCcCCCCCCcccccccccEEEccCccccccCCCCCCCCCc
Q 002250 343 ETYANCKSLIRFRVNNNSLSGTIPPGIWSLPNLSIIDLSTNQFEGPVTDDIGNAKSLALLLLANNRFSGELPSKISEASS 422 (947)
Q Consensus 343 ~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 422 (947)
++|+.|++++|.+++ +|..+. ++|+.|+|++|+|+. +|..+ .++|+.|++++|+|+ .+|..+. ..
T Consensus 325 ------~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~~-LP~~l--p~~L~~LdLs~N~Lt-~LP~~l~--~s 389 (754)
T PRK15370 325 ------PGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQITV-LPETL--PPTITTLDVSRNALT-NLPENLP--AA 389 (754)
T ss_pred ------ccceeccccCCcccc-CChhhc--CcccEEECCCCCCCc-CChhh--cCCcCEEECCCCcCC-CCCHhHH--HH
Confidence 234444444444442 333332 345555555555542 22222 234555555555555 3444332 24
Q ss_pred ceEEEcccCcccCCCCcccc----cccccchhhccccccCCCCCcccccccccceeeccCceeee-ecCCCCCccCcCcE
Q 002250 423 LVSIQLSLNQFSGQIPLDIG----KLKKLSSLYLHDNMFSGPLPYSIGSCVSLTDINFAQNSLSG-KIPDSLGSLPSLNS 497 (947)
Q Consensus 423 L~~L~Ls~N~l~~~~p~~~~----~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~ 497 (947)
|+.|++++|+|+ .+|..+. .++++..|+|.+|.++. ..+.+|+.| ++.+.+.| .++...+...+++.
T Consensus 390 L~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls~------~tl~~L~~L-l~s~~~~gp~i~~~~~~~~~l~~ 461 (754)
T PRK15370 390 LQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFSE------RTIQNMQRL-MSSVGYQGPRVLFAMGDFSIVRV 461 (754)
T ss_pred HHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCccH------HHHHHHHHh-hhcccccCCcccccccccccccc
Confidence 555566666655 3443322 23555666666666541 234444444 33344433 23333344444443
Q ss_pred EECCCCccCC
Q 002250 498 LNLSNNKFSG 507 (947)
Q Consensus 498 L~Ls~N~l~~ 507 (947)
...-.+.+.+
T Consensus 462 ~~~l~~a~~~ 471 (754)
T PRK15370 462 TRPLHQAVQG 471 (754)
T ss_pred cchHHHHHhc
Confidence 3333333433
No 427
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.83 E-value=1.7e-21 Score=226.18 Aligned_cols=269 Identities=19% Similarity=0.242 Sum_probs=197.1
Q ss_pred CCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEEE
Q 002250 632 KPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYCS 710 (947)
Q Consensus 632 ~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 710 (947)
...+.+|.|++|.|+.+... ..+..+.|.+... .. .. .........+..|+-+-..+.|||++..+..
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~-~~-~~---------~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~ 389 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVR-VK-PT---------ESERKYNYNITSEFCIGSSLSHPNIIETLDI 389 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcc-cC-Cc---------ccHHHHhhhhhhheeecccccCCchhhhHHH
Confidence 35678999999988877643 3444555543200 00 00 0000111226678888889999999888877
Q ss_pred EecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEec
Q 002250 711 ITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIAD 790 (947)
Q Consensus 711 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 790 (947)
+.+....+-+|||+++ +|..++... ..+....+..+..|+..|++|+| +.+|.|||+|++|+++..+|.+||+|
T Consensus 390 ~~~~~~~~~~mE~~~~-Dlf~~~~~~--~~~~~~e~~c~fKqL~~Gv~y~h---~~GiahrdlK~enll~~~~g~lki~D 463 (601)
T KOG0590|consen 390 VQEIDGILQSMEYCPY-DLFSLVMSN--GKLTPLEADCFFKQLLRGVKYLH---SMGLAHRDLKLENLLVTENGILKIID 463 (601)
T ss_pred HhhcccchhhhhcccH-HHHHHHhcc--cccchhhhhHHHHHHHHHHHHHH---hcCceeccCccccEEEecCCceEEee
Confidence 7776666666999999 999999874 34677788889999999999999 89999999999999999999999999
Q ss_pred cccceecccCCCC--cceecccccccccCccccccCCCCCc-cchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhc
Q 002250 791 FGLAKIVQTGEAG--DLTHVIAGTHGYIAPEYAYTCKINEK-SDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKM 867 (947)
Q Consensus 791 fG~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~-~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 867 (947)
||.+....-+... ......+|...|+|||.+....|+++ .||||.|+++..|++|+.||...-.....+.
T Consensus 464 fg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~------- 536 (601)
T KOG0590|consen 464 FGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFK------- 536 (601)
T ss_pred cCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchh-------
Confidence 9999766544332 34456789999999999999999875 7999999999999999999965433322220
Q ss_pred cccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH--HhhccCCCC
Q 002250 868 DSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQ--MLEEAEPCS 924 (947)
Q Consensus 868 ~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~--~L~~~~~~~ 924 (947)
.........+...........+.+...++.++++.||.+|.|+.+|++ .+++++-|-
T Consensus 537 ~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~~c~ 595 (601)
T KOG0590|consen 537 TNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIECCH 595 (601)
T ss_pred hhccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhcceEE
Confidence 001111111222334456667778889999999999999999999984 566666664
No 428
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.83 E-value=2.8e-19 Score=198.72 Aligned_cols=262 Identities=28% Similarity=0.364 Sum_probs=196.7
Q ss_pred cCCcccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcccc-ccceEEE
Q 002250 631 VKPENLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHV-NVVKLYC 709 (947)
Q Consensus 631 ~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~-niv~l~~ 709 (947)
|...+.||.|+||.||++... ..+|+|.+..... ........+.+|+.+++.+.|+ +++++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~--------------~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~ 65 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLE--------------SKSKEVERFLREIQILASLNHPPNIVKLYD 65 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhc--------------cchhHHHHHHHHHHHHHHccCCcceeeEEE
Confidence 567788999999999999977 8899998842211 0012467789999999999988 7999999
Q ss_pred EEecCCccEEEEeccCCCChHHHhhhcCC-ccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCC-CeE
Q 002250 710 SITSEDSNLLVYEYLPNGSLWDRLHTCHK-IEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEW-KPR 787 (947)
Q Consensus 710 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~-~~k 787 (947)
.+......+++++|+.++++.+++..... ..........+..|++.+++|+| +.+++|||+||+||+++..+ .++
T Consensus 66 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H---~~~~~hrd~kp~nil~~~~~~~~~ 142 (384)
T COG0515 66 FFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH---SKGIIHRDIKPENILLDRDGRVVK 142 (384)
T ss_pred EEecCCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeecCCCCeEE
Confidence 99777778999999999999977765322 26788889999999999999999 88999999999999999988 799
Q ss_pred EeccccceecccCCCCc----ceecccccccccCcccccc---CCCCCccchHHHHHHHHHHHhCCCCCCCCCCC--ccc
Q 002250 788 IADFGLAKIVQTGEAGD----LTHVIAGTHGYIAPEYAYT---CKINEKSDVYSFGVVLMELVTGKRPIVPEFGD--SKD 858 (947)
Q Consensus 788 l~DfG~a~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~--~~~ 858 (947)
++|||.++......... ......||..|+|||.+.. ..+....|+||+|++++++++|..||...... ...
T Consensus 143 l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~ 222 (384)
T COG0515 143 LIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQ 222 (384)
T ss_pred EeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHH
Confidence 99999998655443221 2345679999999999987 57888999999999999999999996433221 112
Q ss_pred HHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 002250 859 IVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQM 916 (947)
Q Consensus 859 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~ 916 (947)
..+........ ....... ..........+.+++..|+..+|..|.++.+....
T Consensus 223 ~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 223 TLKIILELPTP--SLASPLS---PSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred HHHHHHhcCCc--ccccccC---ccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 22222111111 0000000 00002233567788889999999999999887764
No 429
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.83 E-value=9.4e-21 Score=182.11 Aligned_cols=202 Identities=27% Similarity=0.340 Sum_probs=167.9
Q ss_pred HhhccCCcccccccCceeEEEEE-eCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccc-ccc
Q 002250 627 IIDAVKPENLIGKGGSGNVYKVV-LNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRH-VNV 704 (947)
Q Consensus 627 ~~~~~~~~~~iG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~ni 704 (947)
....|+++++||.|+||.+|.|. ..+|.+||||+=. .......+..|.++.+.++| ..|
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es-------------------~~a~hpqL~yEskvY~iL~~g~Gi 73 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLES-------------------SKAKHPQLLYESKVYRILQGGVGI 73 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeec-------------------ccCCCcchhHHHHHHHHhccCCCC
Confidence 35789999999999999999999 6789999999741 11334556779999999975 577
Q ss_pred ceEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCC-
Q 002250 705 VKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLE- 783 (947)
Q Consensus 705 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~- 783 (947)
..+..+..+...-.+||+.. |-+|.+.+.-+.+ .++..+++-.|.|++.-++|+| .++++||||||+|+|..-+
T Consensus 74 P~i~~y~~e~~ynvlVMdLL-GPsLEdLfnfC~R-~ftmkTvLMLaDQml~RiEyvH---~r~fiHRDIKPdNFLMGlgr 148 (341)
T KOG1163|consen 74 PHIRHYGTEKDYNVLVMDLL-GPSLEDLFNFCSR-RFTMKTVLMLADQMLSRIEYVH---LRNFIHRDIKPDNFLMGLGR 148 (341)
T ss_pred chhhhhccccccceeeeecc-CccHHHHHHHHhh-hhhHHhHHHHHHHHHHHHHHHH---hhccccccCCccceeecccc
Confidence 77788888888899999999 8899999887643 5888899999999999999999 8999999999999999743
Q ss_pred --CCeEEeccccceecccCCCC-----cceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCC
Q 002250 784 --WKPRIADFGLAKIVQTGEAG-----DLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPE 852 (947)
Q Consensus 784 --~~~kl~DfG~a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~ 852 (947)
..+.++|||+|+.+.+.... .......||.+|.+--...+...+.+.|+=|+|.++.++--|..||.+.
T Consensus 149 h~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQgl 224 (341)
T KOG1163|consen 149 HCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGL 224 (341)
T ss_pred ccceEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCccccc
Confidence 56889999999876544321 1223456999999988877777888999999999999999999999654
No 430
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.82 E-value=2.4e-20 Score=187.90 Aligned_cols=183 Identities=14% Similarity=0.143 Sum_probs=136.5
Q ss_pred HHHHhhccCCcccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccc
Q 002250 624 EKEIIDAVKPENLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVN 703 (947)
Q Consensus 624 ~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n 703 (947)
++-+..+|+..+.+|.|+||.||.+.. +++.+|||++++..... ......-.....+++|+..+.++.|++
T Consensus 26 ~~~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~--------~~~~~~f~~g~~~e~Ea~~l~rL~~~G 96 (232)
T PRK10359 26 DDFLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRT--------ERFLKSFVKGDYYENLIVQTDRVRSEG 96 (232)
T ss_pred HHHhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCch--------HHHHHhhhhhHHHHHHHHHHHHHHHCC
Confidence 355668899999999999999999766 57789999996443211 001011111344789999999999999
Q ss_pred cceEEEEEecC--------CccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCC
Q 002250 704 VVKLYCSITSE--------DSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKS 775 (947)
Q Consensus 704 iv~l~~~~~~~--------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp 775 (947)
|..+.+++... +..++||||++|.+|.++.. .+. ....+++.++..+| ..+++|||++|
T Consensus 97 I~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH---~~gi~H~Dikp 163 (232)
T PRK10359 97 LASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLH---QHGMVSGDPHK 163 (232)
T ss_pred CCcceEeeeecccccccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHH---HcCCccCCCCh
Confidence 99999886543 35789999999999988742 222 23558899999999 89999999999
Q ss_pred CCeEecCCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHH
Q 002250 776 SNILLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELV 843 (947)
Q Consensus 776 ~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell 843 (947)
+||++++++ ++++|||............ .+.....+..++|+|+||+++....
T Consensus 164 ~Nili~~~g-i~liDfg~~~~~~e~~a~d--------------~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 164 GNFIVSKNG-LRIIDLSGKRCTAQRKAKD--------------RIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred HHEEEeCCC-EEEEECCCcccccchhhHH--------------HHHHHhHhcccccccceeEeehHHH
Confidence 999999988 9999999886553222111 1233445667899999999887654
No 431
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.80 E-value=2e-19 Score=180.04 Aligned_cols=156 Identities=18% Similarity=0.155 Sum_probs=110.5
Q ss_pred cccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccch--hhh-------hhcccCChhhHHHHHHHHhhcccccc
Q 002250 634 ENLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSS--TAI-------LSKRSSRSSEYDAEVATLSAVRHVNV 704 (947)
Q Consensus 634 ~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~--~~~-------~~~~~~~~~~~~~E~~~l~~l~h~ni 704 (947)
...||+|+||.||+|...+|++||||+++++........... ... .............|++.+.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 467999999999999988899999999975432111100000 000 00000001233569999999988876
Q ss_pred ceEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHH-hcCCCCCeEeccCCCCCeEecCC
Q 002250 705 VKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYL-HHGFDRPVIHRDVKSSNILLDLE 783 (947)
Q Consensus 705 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yL-H~~~~~~ivH~Dlkp~NIll~~~ 783 (947)
.....+.. ...++||||++++++...... ...++......++.|++.+|+|+ | +.+|+||||||+||+++ +
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~--~~~~~~~~~~~i~~qi~~~L~~l~H---~~giiHrDlkP~NIli~-~ 153 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRLK--DAPLSESKARELYLQVIQIMRILYQ---DCRLVHADLSEYNLLYH-D 153 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhhh--cCCCCHHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEE-C
Confidence 44333222 234899999998877654332 24578888999999999999999 6 78999999999999998 4
Q ss_pred CCeEEeccccceec
Q 002250 784 WKPRIADFGLAKIV 797 (947)
Q Consensus 784 ~~~kl~DfG~a~~~ 797 (947)
+.++|+|||+|...
T Consensus 154 ~~v~LiDFG~a~~~ 167 (190)
T cd05147 154 GKLYIIDVSQSVEH 167 (190)
T ss_pred CcEEEEEccccccC
Confidence 78999999999754
No 432
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.80 E-value=2.3e-19 Score=197.97 Aligned_cols=219 Identities=26% Similarity=0.413 Sum_probs=167.4
Q ss_pred HhhccccccceEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCC
Q 002250 696 LSAVRHVNVVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKS 775 (947)
Q Consensus 696 l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp 775 (947)
|+.+.|.|+.+++|.+.++...++|.+|++.|+|.|.+.. ....++|.....+..+++.||+|+|+ ++-..|+.+++
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~-~~~~~d~~F~~s~~rdi~~Gl~ylh~--s~i~~hg~l~s 77 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN-EDIKLDYFFILSFIRDISKGLAYLHN--SPIGYHGALKS 77 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc-cccCccHHHHHHHHHHHHHHHHHHhc--Ccceeeeeecc
Confidence 3567899999999999999999999999999999999987 56789999999999999999999994 33349999999
Q ss_pred CCeEecCCCCeEEeccccceecccCCCCcceecccccccccCccccccCC-------CCCccchHHHHHHHHHHHhCCCC
Q 002250 776 SNILLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCK-------INEKSDVYSFGVVLMELVTGKRP 848 (947)
Q Consensus 776 ~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-------~~~~~Dv~slGv~l~elltg~~p 848 (947)
+|++++..+.+|++|||+.................-..-|.|||.+.... .+.+.||||||++++|+++.+.|
T Consensus 78 ~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~ 157 (484)
T KOG1023|consen 78 SNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGP 157 (484)
T ss_pred ccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCc
Confidence 99999999999999999987764311111111112345699999987642 45679999999999999999999
Q ss_pred CCCCCCCc--ccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCCCC
Q 002250 849 IVPEFGDS--KDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEAEPCS 924 (947)
Q Consensus 849 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~~~~~ 924 (947)
|....... .++...+.. .. ...+.|.+.... +....+..++..||..+|++||++.+|-..++......
T Consensus 158 ~~~~~~~~~~~eii~~~~~--~~----~~~~rP~i~~~~-e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~~ 228 (484)
T KOG1023|consen 158 FDLRNLVEDPDEIILRVKK--GG----SNPFRPSIELLN-ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKGG 228 (484)
T ss_pred cccccccCChHHHHHHHHh--cC----CCCcCcchhhhh-hcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcccc
Confidence 97544322 233333222 01 112223332222 44447899999999999999999999999988776643
No 433
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.79 E-value=9.1e-19 Score=176.36 Aligned_cols=157 Identities=22% Similarity=0.224 Sum_probs=112.9
Q ss_pred cccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchh--hhh-h------cccCChhhHHHHHHHHhhcccccc
Q 002250 634 ENLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSST--AIL-S------KRSSRSSEYDAEVATLSAVRHVNV 704 (947)
Q Consensus 634 ~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~--~~~-~------~~~~~~~~~~~E~~~l~~l~h~ni 704 (947)
...||+|+||.||+|...+|+.||||++.+............. ... . ........+.+|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4679999999999999778999999999765321110000000 000 0 000012334689999999999987
Q ss_pred ceEEEEEecCCccEEEEeccCCCChHHH-hhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCC-CCeEeccCCCCCeEecC
Q 002250 705 VKLYCSITSEDSNLLVYEYLPNGSLWDR-LHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFD-RPVIHRDVKSSNILLDL 782 (947)
Q Consensus 705 v~l~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~-~~ivH~Dlkp~NIll~~ 782 (947)
.....+... ..++||||++++++... +.. ...+.....+++.|++.++.|+| . .+|+||||||+||+++
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~---~~~~~~~~~~i~~~l~~~l~~lH---~~~givHrDlkP~NIll~- 152 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLKD---VPLEEEEAEELYEQVVEQMRRLY---QEAGLVHGDLSEYNILYH- 152 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhhh---ccCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCChhhEEEE-
Confidence 544443332 24899999998865443 332 34677788899999999999999 6 8999999999999999
Q ss_pred CCCeEEeccccceeccc
Q 002250 783 EWKPRIADFGLAKIVQT 799 (947)
Q Consensus 783 ~~~~kl~DfG~a~~~~~ 799 (947)
++.++|+|||+|.....
T Consensus 153 ~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 153 DGKPYIIDVSQAVELDH 169 (190)
T ss_pred CCCEEEEEcccceecCC
Confidence 88999999999986543
No 434
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.78 E-value=1.2e-18 Score=171.27 Aligned_cols=191 Identities=17% Similarity=0.122 Sum_probs=138.8
Q ss_pred CCcccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcc-ccccceEEEE
Q 002250 632 KPENLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVR-HVNVVKLYCS 710 (947)
Q Consensus 632 ~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~ 710 (947)
.+...|++|+||+||.+.- .+.+++.+.+..+... ....+...+.+|+++++++. |+++++++++
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~-------------~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~ 70 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWW-------------LRGVAWWLARREALALRQLDGLPRTPRLLHW 70 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhh-------------hhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE
Confidence 4567899999999997766 5778887766311100 00111235889999999995 5889999886
Q ss_pred EecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccC-CCCCeEecCCCCeEEe
Q 002250 711 ITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDV-KSSNILLDLEWKPRIA 789 (947)
Q Consensus 711 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dl-kp~NIll~~~~~~kl~ 789 (947)
...+++|||++|.+|.+.... . ...+..|++.+++++| +.+|+|||| ||.||+++.++.++|+
T Consensus 71 ----~~~~lvmeyI~G~~L~~~~~~------~---~~~~~~qi~~~L~~lH---~~GIvHrDL~kp~NILv~~~g~i~LI 134 (218)
T PRK12274 71 ----DGRHLDRSYLAGAAMYQRPPR------G---DLAYFRAARRLLQQLH---RCGVAHNDLAKEANWLVQEDGSPAVI 134 (218)
T ss_pred ----cCEEEEEeeecCccHHhhhhh------h---hHHHHHHHHHHHHHHH---HCcCccCCCCCcceEEEcCCCCEEEE
Confidence 446999999999998754422 0 1246678899999999 899999999 7999999999999999
Q ss_pred ccccceecccCCCC----cc-------eecccccccccCccccccC-CCC-CccchHHHHHHHHHHHhCCCCCCCC
Q 002250 790 DFGLAKIVQTGEAG----DL-------THVIAGTHGYIAPEYAYTC-KIN-EKSDVYSFGVVLMELVTGKRPIVPE 852 (947)
Q Consensus 790 DfG~a~~~~~~~~~----~~-------~~~~~gt~~y~aPE~~~~~-~~~-~~~Dv~slGv~l~elltg~~p~~~~ 852 (947)
|||+|......... .. ......++.|++|+....- ..+ .+.+.++-|..+|.++|+..|...+
T Consensus 135 DFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~ 210 (218)
T PRK12274 135 DFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED 210 (218)
T ss_pred ECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence 99999855433210 00 1122357778888755332 222 5679999999999999999887544
No 435
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.78 E-value=6e-19 Score=181.34 Aligned_cols=204 Identities=21% Similarity=0.228 Sum_probs=143.5
Q ss_pred cccccceEEEEEec---------------------------CCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHH
Q 002250 700 RHVNVVKLYCSITS---------------------------EDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVG 752 (947)
Q Consensus 700 ~h~niv~l~~~~~~---------------------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ 752 (947)
+|||||++.++|.+ +...|+||.-.+ .+|.+++-... .+.....-|..|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~~---~s~r~~~~~laQ 349 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTRH---RSYRTGRVILAQ 349 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcCC---CchHHHHHHHHH
Confidence 59999999877643 234589998884 58888887632 344455667789
Q ss_pred HHHHHHHHhcCCCCCeEeccCCCCCeEec--CCC--CeEEeccccceecccCC----CCcceecccccccccCccccccC
Q 002250 753 AAKGLEYLHHGFDRPVIHRDVKSSNILLD--LEW--KPRIADFGLAKIVQTGE----AGDLTHVIAGTHGYIAPEYAYTC 824 (947)
Q Consensus 753 ia~~l~yLH~~~~~~ivH~Dlkp~NIll~--~~~--~~kl~DfG~a~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~ 824 (947)
+.+|+.||| .++|.|||+|++|||+. +|+ ..+++|||++--..... .....-...|...-||||+....
T Consensus 350 lLEav~hL~---~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~ 426 (598)
T KOG4158|consen 350 LLEAVTHLH---KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAV 426 (598)
T ss_pred HHHHHHHHH---HccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcC
Confidence 999999999 89999999999999994 343 46899999884222110 00001123477889999987543
Q ss_pred C------CCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHh
Q 002250 825 K------INEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIH 898 (947)
Q Consensus 825 ~------~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~ 898 (947)
. .-.|+|.|+.|.+.||+++...||+...+..-+... --...++..++.++..+.+++..
T Consensus 427 PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~--------------Yqe~qLPalp~~vpp~~rqlV~~ 492 (598)
T KOG4158|consen 427 PGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRT--------------YQESQLPALPSRVPPVARQLVFD 492 (598)
T ss_pred CCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhh--------------hhhhhCCCCcccCChHHHHHHHH
Confidence 2 225899999999999999999999642211111111 01123455667778889999999
Q ss_pred ccCCCCCCCCCHHHHHHHhhccCCCC
Q 002250 899 CTNKLPAFRPSMRVVVQMLEEAEPCS 924 (947)
Q Consensus 899 cl~~dP~~RPt~~ev~~~L~~~~~~~ 924 (947)
.++.||++|++..-...+|.-.-..+
T Consensus 493 lL~r~pskRvsp~iAANvl~LsLw~~ 518 (598)
T KOG4158|consen 493 LLKRDPSKRVSPNIAANVLNLSLWRM 518 (598)
T ss_pred HhcCCccccCCccHHHhHHHHHHhcC
Confidence 99999999999887777666544333
No 436
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.78 E-value=5.5e-21 Score=174.13 Aligned_cols=179 Identities=26% Similarity=0.460 Sum_probs=155.1
Q ss_pred CCccccccCcccccCCcccceeeccCccccCcCchhhhcCCCccEEeCcCccCcCCCCCcccccccceeecCCCCccCcc
Q 002250 45 EQQLLGVVPFDSICGLQALQKINLGTNFLYGTITEGLKSCTRLQVLDLGNNSFSGEVPDLSMLHELSFLNLNSSGISGKF 124 (947)
Q Consensus 45 ~~~~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~l~~l~~L~~L~L~~n~i~~~~ 124 (947)
+.+++.....+-+..+..++.|.|++|++ ..+|..+..+.+|+.|++++|+|+..+++++.+++|+.|++.-|++. ..
T Consensus 17 DrgiSsf~~~~gLf~~s~ITrLtLSHNKl-~~vppnia~l~nlevln~~nnqie~lp~~issl~klr~lnvgmnrl~-~l 94 (264)
T KOG0617|consen 17 DRGISSFEELPGLFNMSNITRLTLSHNKL-TVVPPNIAELKNLEVLNLSNNQIEELPTSISSLPKLRILNVGMNRLN-IL 94 (264)
T ss_pred ccccccHhhcccccchhhhhhhhcccCce-eecCCcHHHhhhhhhhhcccchhhhcChhhhhchhhhheecchhhhh-cC
Confidence 34444433334466778899999999999 56677899999999999999999999999999999999999999986 56
Q ss_pred CcccccccCCCceeeCCCCCCCCCCCChhhcccccCcEEEccCccccccCCccCCCCCCCCEEECcCcccccccCccccC
Q 002250 125 PWKSLENLTNLEFLSLGDNPFDPSPFPMEVLKLEKLYWLYLTNCSVTGQIPEGIGNLTQLQNLELSDNELFGEIPAGIVK 204 (947)
Q Consensus 125 ~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~ 204 (947)
| ..|+.++.|+.|||.+|.+....+|..|..++.|+-|+|+.|.+. .+|..++++++|+.|.+.+|.+- .+|..++.
T Consensus 95 p-rgfgs~p~levldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~ 171 (264)
T KOG0617|consen 95 P-RGFGSFPALEVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGD 171 (264)
T ss_pred c-cccCCCchhhhhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHH
Confidence 6 789999999999999999998889999999999999999999998 88889999999999999999986 78899999
Q ss_pred CCCCcEEEeecccccccCCccCCCC
Q 002250 205 LNKLWQLELYNNSLSGRLPVGFSNL 229 (947)
Q Consensus 205 l~~L~~L~L~~n~l~~~~~~~~~~l 229 (947)
+..|++|++.+|+++ .+|..++++
T Consensus 172 lt~lrelhiqgnrl~-vlppel~~l 195 (264)
T KOG0617|consen 172 LTRLRELHIQGNRLT-VLPPELANL 195 (264)
T ss_pred HHHHHHHhcccceee-ecChhhhhh
Confidence 999999999999998 666665553
No 437
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.76 E-value=2.6e-19 Score=205.42 Aligned_cols=252 Identities=20% Similarity=0.244 Sum_probs=178.2
Q ss_pred ccCCcccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHH--HhhccccccceE
Q 002250 630 AVKPENLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVAT--LSAVRHVNVVKL 707 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~l 707 (947)
.+...+.+|.+.|=+|.+|+.+.|. |+||++-.. ........|.++++- ...++|||.+++
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~----------------~p~~sL~~~~qrL~~ik~~l~~~pn~lPf 86 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQ----------------DPTISLRPFKQRLEEIKFALMKAPNCLPF 86 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEecc----------------CCCCCchHHHHHHHHHHHHhhcCCcccch
Confidence 6777889999999999999998776 999998321 112233344433333 445589999999
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
.-+...+...|||-+|+ ..+|.|++.. +.-+.......|+.|+..|+..+| ..+|+|||||.+|||++.=.=+.
T Consensus 87 qk~~~t~kAAylvRqyv-khnLyDRlST--RPFL~~iEKkWiaFQLL~al~qcH---~~gVcHGDIKsENILiTSWNW~~ 160 (1431)
T KOG1240|consen 87 QKVLVTDKAAYLVRQYV-KHNLYDRLST--RPFLVLIEKKWIAFQLLKALSQCH---KLGVCHGDIKSENILITSWNWLY 160 (1431)
T ss_pred HHHHHhhHHHHHHHHHH-hhhhhhhhcc--chHHHHHHHHHHHHHHHHHHHHHH---HcCccccccccceEEEeeechhh
Confidence 88888888889999999 4599999986 334677778889999999999999 89999999999999999877789
Q ss_pred Eecccccee--cccCCCCcce---ecccccccccCccccccCC-----------CCCccchHHHHHHHHHHHh-CCCCCC
Q 002250 788 IADFGLAKI--VQTGEAGDLT---HVIAGTHGYIAPEYAYTCK-----------INEKSDVYSFGVVLMELVT-GKRPIV 850 (947)
Q Consensus 788 l~DfG~a~~--~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~-----------~~~~~Dv~slGv~l~ellt-g~~p~~ 850 (947)
|+||..-+. .+.+...... +....-.+|+|||.+.... .+++-||||.||++.|+++ |++||.
T Consensus 161 LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~ 240 (1431)
T KOG1240|consen 161 LTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFT 240 (1431)
T ss_pred hhcccccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCccc
Confidence 999986643 2222222211 1112335799999875421 4567899999999999998 788873
Q ss_pred CCCCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhc
Q 002250 851 PEFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEE 919 (947)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~ 919 (947)
-..+..+ +.. +... .+ ..+.++.. ..+..++..|++.||++|.++.+.++.-++
T Consensus 241 -----LSQL~aY--r~~-~~~~-~e---~~Le~Ied---~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG 294 (1431)
T KOG1240|consen 241 -----LSQLLAY--RSG-NADD-PE---QLLEKIED---VSLRNLILSMIQRDPSKRLSAEDYLQKYRG 294 (1431)
T ss_pred -----HHHHHhH--hcc-CccC-HH---HHHHhCcC---ccHHHHHHHHHccCchhccCHHHHHHhhhc
Confidence 1111111 111 0100 00 00111111 146778889999999999999999988655
No 438
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.76 E-value=2.8e-19 Score=196.33 Aligned_cols=235 Identities=26% Similarity=0.324 Sum_probs=179.8
Q ss_pred ccccCceeEEEEE----eCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcc-ccccceEEEEE
Q 002250 637 IGKGGSGNVYKVV----LNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVR-HVNVVKLYCSI 711 (947)
Q Consensus 637 iG~G~~g~Vy~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~ 711 (947)
+|+|+||.|+.++ ...|+-+|+|+........+ .......|..++...+ ||.+|++.-.+
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~---------------~~~~t~~er~il~~~~~~~f~v~lhyaf 66 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVR---------------DRTHTKQERIILAFVHNTPFLVKLHYAF 66 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccc---------------cccccccHHHHHhhccCCCceeeeeeee
Confidence 6999999999865 23477899998854332221 1114456788888886 99999999999
Q ss_pred ecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEecc
Q 002250 712 TSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADF 791 (947)
Q Consensus 712 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 791 (947)
+.+...+++++|..+|.+...+... ..++..........+|-+++++| +.+|+|||+|++||+++.+|.+++.||
T Consensus 67 qt~~kl~l~ld~~rgg~lft~l~~~--~~f~~~~~~~~~aelaLald~lh---~l~iiyrd~k~enilld~~Ghi~~tdf 141 (612)
T KOG0603|consen 67 QTDGKLYLILDFLRGGDLFTRLSKE--VMFDELDVAFYLAELALALDHLH---KLGIAYRDYKLENVLLLLEGHIKLTDF 141 (612)
T ss_pred ccccchhHhhhhcccchhhhccccC--CchHHHHHHHHHHHHHHHHhhcc---hhHHHHhcccccceeecccCccccCCc
Confidence 9999999999999999998888764 33566666666677888999999 899999999999999999999999999
Q ss_pred ccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhccccc
Q 002250 792 GLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDSRD 871 (947)
Q Consensus 792 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 871 (947)
|.++..-..+. .+||..|||||++. .....+|.||||++++||+||..||.. +.... ....
T Consensus 142 glske~v~~~~------~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~------~~~~~---Il~~-- 202 (612)
T KOG0603|consen 142 GLSKEAVKEKI------ACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG------DTMKR---ILKA-- 202 (612)
T ss_pred hhhhHhHhhhh------cccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch------HHHHH---Hhhh--
Confidence 99986544332 28999999999988 467889999999999999999999853 22221 1111
Q ss_pred cccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHH-HHHHHhhc
Q 002250 872 SMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMR-VVVQMLEE 919 (947)
Q Consensus 872 ~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~-ev~~~L~~ 919 (947)
-..++.+......+++..+...+|..|.-.. +.+..+++
T Consensus 203 ---------~~~~p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~ 242 (612)
T KOG0603|consen 203 ---------ELEMPRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQ 242 (612)
T ss_pred ---------ccCCchhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhc
Confidence 1234556666677788888889999986542 44444443
No 439
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.76 E-value=4e-20 Score=168.57 Aligned_cols=179 Identities=26% Similarity=0.432 Sum_probs=117.9
Q ss_pred CCCCCCcceeccccCCcCCCCCCcccccccccEEEccCccccccCCCCCCCCCcceEEEcccCcccCCCCcccccccccc
Q 002250 369 IWSLPNLSIIDLSTNQFEGPVTDDIGNAKSLALLLLANNRFSGELPSKISEASSLVSIQLSLNQFSGQIPLDIGKLKKLS 448 (947)
Q Consensus 369 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 448 (947)
+.++.++..|.||+|+++ .+|..+..+.+|+.|++++|+|+ .+|..++.+++|+.|+++-|++. ..|..|+.++.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 344556666666666666 34445666666666677777666 66667777777777777777776 6677777777777
Q ss_pred hhhccccccCC-CCCcccccccccceeeccCceeeeecCCCCCccCcCcEEECCCCccCCccCCcc-cccccceeeCCCC
Q 002250 449 SLYLHDNMFSG-PLPYSIGSCVSLTDINFAQNSLSGKIPDSLGSLPSLNSLNLSNNKFSGEIPISL-TYPKLSLLDLSNN 526 (947)
Q Consensus 449 ~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~~~L~~L~ls~N 526 (947)
.|||++|++.. .+|..|..|+.|+.|+|+.|.+. .+|..++++++|+.|.+..|.+- .+|... .+.+|+.|.+.+|
T Consensus 106 vldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgn 183 (264)
T KOG0617|consen 106 VLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGN 183 (264)
T ss_pred hhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccc
Confidence 77777777653 36777777777777777777776 67777777777777777777776 334433 3567777777777
Q ss_pred cCCCCCCCccccc----ccccccccCCCCC
Q 002250 527 QLAGPIPEPLNIK----AFIDSFTGNPGLC 552 (947)
Q Consensus 527 ~l~~~~p~~~~~~----~~~~~~~gN~~~c 552 (947)
+++..+|+..+.. ....-+..|||.-
T Consensus 184 rl~vlppel~~l~l~~~k~v~r~E~NPwv~ 213 (264)
T KOG0617|consen 184 RLTVLPPELANLDLVGNKQVMRMEENPWVN 213 (264)
T ss_pred eeeecChhhhhhhhhhhHHHHhhhhCCCCC
Confidence 7776666654311 1122456787764
No 440
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.75 E-value=3.9e-18 Score=177.13 Aligned_cols=235 Identities=19% Similarity=0.233 Sum_probs=148.9
Q ss_pred ccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcc--------
Q 002250 630 AVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVR-------- 700 (947)
Q Consensus 630 ~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-------- 700 (947)
.+...+.||.|+++.||.++.. +++++|||++.-... ......+.+++|.-....+.
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~--------------~~~~~~~~~~~e~l~~~~~~~~~~p~~a 78 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPAD--------------ASANEYEQLKEEQLAITLFPGVKNPKEA 78 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESST--------------THTTHHHHHHHHHHGGGGSTT--SHHHH
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccc--------------cchHHHHHHHHHHHHhhhhccCCCHHHH
Confidence 3445678999999999999976 589999999853321 11133455666665555432
Q ss_pred --ccccceEEEE---------EecC---C-----ccEEEEeccCCCChHHHhhh---cC--CccCCHHHHHHHHHHHHHH
Q 002250 701 --HVNVVKLYCS---------ITSE---D-----SNLLVYEYLPNGSLWDRLHT---CH--KIEMDWVVRYAIAVGAAKG 756 (947)
Q Consensus 701 --h~niv~l~~~---------~~~~---~-----~~~lv~e~~~~gsL~~~l~~---~~--~~~~~~~~~~~i~~~ia~~ 756 (947)
|-.++.-++. +... . ..+++|+-+ .++|.+.+.. .. ........+..+..|+++.
T Consensus 79 ~~~~r~l~P~d~~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~l 157 (288)
T PF14531_consen 79 YRHLRFLVPLDLLRIPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRL 157 (288)
T ss_dssp HHHH-B---SEEEEETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHH
T ss_pred HHhceEEeeeEEEEEcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHH
Confidence 2112211111 1111 1 235677777 5688887652 11 2235566778888999999
Q ss_pred HHHHhcCCCCCeEeccCCCCCeEecCCCCeEEeccccceecccCCCCcceecccccccccCcccccc--------CCCCC
Q 002250 757 LEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYT--------CKINE 828 (947)
Q Consensus 757 l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~ 828 (947)
+++|| ..++||+||+|+|++++.+|.++|+||+.....+.... ....+..|.+||.... ..++.
T Consensus 158 vA~Lh---~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~-----~~~~~~~~~PPe~~~~~~~~~~~~~~~t~ 229 (288)
T PF14531_consen 158 VANLH---SYGLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRYR-----CSEFPVAFTPPELESCAGQFGQNNAPYTF 229 (288)
T ss_dssp HHHHH---HTTEEEST-SGGGEEE-TTS-EEE--GGGEEETTEEEE-----GGGS-TTTS-HHHHHHHTSCHHSEEEE-H
T ss_pred HHHHh---hcceEecccceeeEEEcCCCCEEEcChHHHeecCceee-----ccCCCcccCChhhhhhhcccCcccceeee
Confidence 99999 89999999999999999999999999998765433211 1234578999997643 24788
Q ss_pred ccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCC
Q 002250 829 KSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFR 907 (947)
Q Consensus 829 ~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~R 907 (947)
+.|.|++|+++|.|++|..||....... ..+..+..+. +.++.+..++..+++.+|.+|
T Consensus 230 ~~DaW~LG~~ly~lWC~~lPf~~~~~~~-------------------~~~~~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 230 ATDAWQLGITLYSLWCGRLPFGLSSPEA-------------------DPEWDFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHHHHHHHHHHHHHHSS-STCCCGGGS-------------------TSGGGGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred ccCHHHHHHHHHHHHHccCCCCCCCccc-------------------cccccchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 8999999999999999999985321100 0001334455 778889999999999999987
No 441
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.74 E-value=2.6e-20 Score=205.46 Aligned_cols=60 Identities=27% Similarity=0.401 Sum_probs=28.9
Q ss_pred ccccEEEccCcccc----ccCCCCCCCCCcceEEEcccCcccCC----CCcccccc-cccchhhccccc
Q 002250 397 KSLALLLLANNRFS----GELPSKISEASSLVSIQLSLNQFSGQ----IPLDIGKL-KKLSSLYLHDNM 456 (947)
Q Consensus 397 ~~L~~L~L~~N~l~----~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l-~~L~~L~Ls~N~ 456 (947)
..|+.|++++|.++ ..+...+..+++|+.+++++|.++.. +...+... +.|+.|++.+|.
T Consensus 250 ~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (319)
T cd00116 250 ISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDS 318 (319)
T ss_pred CCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCC
Confidence 34445555555443 11223334445666666666666532 22222333 456666666654
No 442
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.72 E-value=3.2e-17 Score=193.37 Aligned_cols=194 Identities=22% Similarity=0.267 Sum_probs=158.2
Q ss_pred hccCCcccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcc---ccccc
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVR---HVNVV 705 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv 705 (947)
+.|.+.+.||+|+||+||+|...+|+.||+|+=.|.+. ++|.-=.+++.+|+ -+-|+
T Consensus 698 ~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~--------------------WEfYI~~q~~~RLk~~~~~~~~ 757 (974)
T KOG1166|consen 698 EKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNP--------------------WEFYICLQVMERLKPQMLPSIM 757 (974)
T ss_pred eeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCc--------------------eeeeehHHHHHhhchhhhcchH
Confidence 56788899999999999999988899999998755442 23333344555555 23455
Q ss_pred eEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEec----
Q 002250 706 KLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLD---- 781 (947)
Q Consensus 706 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~---- 781 (947)
.+...+.-.+.-++|+||.+.|+|.+++.. ....+|...+.++.|+++.+++|| ..+|||+||||+|+||.
T Consensus 758 ~~~~a~~~~~~S~lv~ey~~~Gtlld~~N~--~~~m~e~lv~~~~~qml~ive~lH---~~~IIHgDiKPDNfll~~~~~ 832 (974)
T KOG1166|consen 758 HISSAHVFQNASVLVSEYSPYGTLLDLINT--NKVMDEYLVMFFSCQMLRIVEHLH---AMGIIHGDIKPDNFLLRREIC 832 (974)
T ss_pred HHHHHHccCCcceeeeeccccccHHHhhcc--CCCCCchhhhHHHHHHHHHHHHHH---hcceecccCCcceeEeecccC
Confidence 555556667788999999999999999984 456899999999999999999999 89999999999999995
Q ss_pred ---CCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCC
Q 002250 782 ---LEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKR 847 (947)
Q Consensus 782 ---~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~ 847 (947)
+...++|+|||.+-.+..-........+++|-.+-.+|+..+..+++.+|-|.++.+++-|+.|++
T Consensus 833 ~~~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 833 ADSDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred CCCcccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 235689999999965543333334446788999999999999999999999999999999999984
No 443
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.72 E-value=1.1e-19 Score=200.53 Aligned_cols=279 Identities=22% Similarity=0.259 Sum_probs=128.5
Q ss_pred EEeCcCccCcCCC--CCcccccccceeecCCCCccCc----cCcccccccCCCceeeCCCCCCCC--CC---CChhhccc
Q 002250 89 VLDLGNNSFSGEV--PDLSMLHELSFLNLNSSGISGK----FPWKSLENLTNLEFLSLGDNPFDP--SP---FPMEVLKL 157 (947)
Q Consensus 89 ~L~Ls~n~i~~~~--~~l~~l~~L~~L~L~~n~i~~~----~~~~~l~~l~~L~~L~Ls~n~i~~--~~---~~~~~~~l 157 (947)
.|+|+.+.+++.- ..+..+++|+.|+++++.++.. ++ ..+...++|++|+++++.+.. .. ++..+..+
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~-~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~ 80 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALA-SALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKG 80 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHH-HHHhhCCCceEEeccccccCCcchHHHHHHHHHHhc
Confidence 4677777776422 2255666677777777777432 22 345556667777777776542 00 11223334
Q ss_pred ccCcEEEccCccccccCCccCCCCCCCCEEECcCcccccccCccccCCCCCcEEEeecccccc----cCCccCCCC-CCc
Q 002250 158 EKLYWLYLTNCSVTGQIPEGIGNLTQLQNLELSDNELFGEIPAGIVKLNKLWQLELYNNSLSG----RLPVGFSNL-TNL 232 (947)
Q Consensus 158 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~----~~~~~~~~l-~~L 232 (947)
++|+.|++++|.+.+..+..+..+.+ . ++|++|++++|++++ .+...+..+ ++|
T Consensus 81 ~~L~~L~l~~~~~~~~~~~~~~~l~~--------------------~-~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L 139 (319)
T cd00116 81 CGLQELDLSDNALGPDGCGVLESLLR--------------------S-SSLQELKLNNNGLGDRGLRLLAKGLKDLPPAL 139 (319)
T ss_pred CceeEEEccCCCCChhHHHHHHHHhc--------------------c-CcccEEEeeCCccchHHHHHHHHHHHhCCCCc
Confidence 45555555555444333333333322 0 114444444444441 111223333 445
Q ss_pred cEEeccCCCCCCC-----CccccccCCCCEEEccCccCccc----CCCCccCCCcCcEEEccCcccccc----CCcCccC
Q 002250 233 MNFDVSQNRLEGD-----LSELRFLNQLSSLHLFENQFSGE----IPEEFGEFKHLTELSLYTNRLTGT----LPQKLGS 299 (947)
Q Consensus 233 ~~L~Ls~N~l~~~-----~~~l~~l~~L~~L~L~~N~i~~~----~~~~~~~l~~L~~L~L~~N~l~~~----~p~~l~~ 299 (947)
+.|++++|.+++. ...+..+.+|+.|++++|.+++. ++..+..+++|++|++++|.+++. ++..+..
T Consensus 140 ~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~ 219 (319)
T cd00116 140 EKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLAS 219 (319)
T ss_pred eEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcc
Confidence 5555555554421 11233344555555555555421 122233344556666655555422 2233444
Q ss_pred cccccccccccccccCCCCCCcccCCccceeeecccccCCcCCccccCCCCccEEEcccccccc----cCCCCCCCCCCc
Q 002250 300 WADFNYVDVSENLLTGPIPPDMCKTGAMTDLLVLQNNFNGTVPETYANCKSLIRFRVNNNSLSG----TIPPGIWSLPNL 375 (947)
Q Consensus 300 l~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~----~~p~~~~~l~~L 375 (947)
+++|++|++++|.+++.....++.. .....+.|+.|++++|.++. .+...+..+++|
T Consensus 220 ~~~L~~L~ls~n~l~~~~~~~l~~~-------------------~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L 280 (319)
T cd00116 220 LKSLEVLNLGDNNLTDAGAAALASA-------------------LLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESL 280 (319)
T ss_pred cCCCCEEecCCCcCchHHHHHHHHH-------------------HhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCc
Confidence 5556666666665543111111000 00123455566666665541 112233344566
Q ss_pred ceeccccCCcCCC----CCCccccc-ccccEEEccCcc
Q 002250 376 SIIDLSTNQFEGP----VTDDIGNA-KSLALLLLANNR 408 (947)
Q Consensus 376 ~~L~Ls~N~l~~~----~~~~~~~l-~~L~~L~L~~N~ 408 (947)
+++++++|.+... ....+... ..|+.+++.+|.
T Consensus 281 ~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (319)
T cd00116 281 LELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDS 318 (319)
T ss_pred cEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCC
Confidence 6666666666533 22222222 455666665554
No 444
>PRK10345 hypothetical protein; Provisional
Probab=99.71 E-value=5.8e-17 Score=163.47 Aligned_cols=136 Identities=18% Similarity=0.297 Sum_probs=103.1
Q ss_pred CCcccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-----cccccce
Q 002250 632 KPENLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-----RHVNVVK 706 (947)
Q Consensus 632 ~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~ 706 (947)
...+.||+|+||.||. .+.....+||++.... ......+.+|+.+++.+ .||||++
T Consensus 5 ~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~-----------------~~~~~~~~rEi~~l~~L~~~~~~h~nIvr 65 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRG-----------------DGGDKEIRRELKYYAHLSRRLIDWSGIPR 65 (210)
T ss_pred CCcceecCCCceEEEE--CCCCcCeEEEEEeccc-----------------cchHHHHHHHHHHHHHhhccCCCCcccce
Confidence 3457899999999996 5433444799884221 12345689999999999 5799999
Q ss_pred EEEEEecCC---ccE-EEEec--cCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHH-HHHhcCCCCCeEeccCCCCCeE
Q 002250 707 LYCSITSED---SNL-LVYEY--LPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGL-EYLHHGFDRPVIHRDVKSSNIL 779 (947)
Q Consensus 707 l~~~~~~~~---~~~-lv~e~--~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l-~yLH~~~~~~ivH~Dlkp~NIl 779 (947)
++|+++++. ..+ +|+|| .++|+|.+++... .+++. ..++.+++.++ +||| +.+|+||||||+||+
T Consensus 66 ~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh---~~~IvhrDlKp~NIL 137 (210)
T PRK10345 66 YYGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLL---DNRIVTMELKPQNIL 137 (210)
T ss_pred eeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHH---HCCEeecCCCHHHEE
Confidence 999998874 334 78999 5579999999762 24444 24566777777 9999 899999999999999
Q ss_pred ecC----CCCeEEec-cccc
Q 002250 780 LDL----EWKPRIAD-FGLA 794 (947)
Q Consensus 780 l~~----~~~~kl~D-fG~a 794 (947)
++. ++.++|+| ||..
T Consensus 138 l~~~~~~~~~~~LiDg~G~~ 157 (210)
T PRK10345 138 CQRISESEVIPVVCDNIGES 157 (210)
T ss_pred EeccCCCCCcEEEEECCCCc
Confidence 974 34799999 5543
No 445
>smart00090 RIO RIO-like kinase.
Probab=99.68 E-value=1.4e-16 Score=165.16 Aligned_cols=157 Identities=22% Similarity=0.207 Sum_probs=111.6
Q ss_pred cCCcccccccCceeEEEEE--eCCCcEEEEEEecCCCCCCCCC--cc-chhh----hhhcccCChhhHHHHHHHHhhccc
Q 002250 631 VKPENLIGKGGSGNVYKVV--LNSGKELAVKHIWPSNSGFRGD--YR-SSTA----ILSKRSSRSSEYDAEVATLSAVRH 701 (947)
Q Consensus 631 ~~~~~~iG~G~~g~Vy~~~--~~~~~~vavK~~~~~~~~~~~~--~~-~~~~----~~~~~~~~~~~~~~E~~~l~~l~h 701 (947)
|++.+.||+|+||.||+|. ..+|+.||||++.......... .. .... ...........+++|++.++++.+
T Consensus 30 ~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~ 109 (237)
T smart00090 30 SAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYE 109 (237)
T ss_pred HHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 6678899999999999998 5689999999996543211000 00 0000 000000112346789999999976
Q ss_pred c--ccceEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCC-eEeccCCCCCe
Q 002250 702 V--NVVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRP-VIHRDVKSSNI 778 (947)
Q Consensus 702 ~--niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~-ivH~Dlkp~NI 778 (947)
. .+.+++++ ...++||||++++++..+.... ..........++.|++.+++||| ..+ |+||||||+||
T Consensus 110 ~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH---~~g~iiH~Dikp~NI 180 (237)
T smart00090 110 AGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD--VEPEEEEEFELYDDILEEMRKLY---KEGELVHGDLSEYNI 180 (237)
T ss_pred cCCCCCeeeEe----cCceEEEEEecCCccccccccc--CCcchHHHHHHHHHHHHHHHHHH---hcCCEEeCCCChhhE
Confidence 3 34444443 2458999999998887765332 23455566789999999999999 888 99999999999
Q ss_pred EecCCCCeEEeccccceec
Q 002250 779 LLDLEWKPRIADFGLAKIV 797 (947)
Q Consensus 779 ll~~~~~~kl~DfG~a~~~ 797 (947)
+++ ++.++++|||.|...
T Consensus 181 li~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 181 LVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred EEE-CCCEEEEEChhhhcc
Confidence 999 889999999998744
No 446
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.67 E-value=2.5e-16 Score=160.07 Aligned_cols=153 Identities=22% Similarity=0.151 Sum_probs=111.6
Q ss_pred cCCcccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhh-----hcccCChhhHHHHHHHHhhcccc--c
Q 002250 631 VKPENLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAIL-----SKRSSRSSEYDAEVATLSAVRHV--N 703 (947)
Q Consensus 631 ~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~E~~~l~~l~h~--n 703 (947)
|.+.+.||+|+||.||+|..++|+.||||+++.+............... .........+.+|+.++.++.|+ .
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 96 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFP 96 (198)
T ss_pred hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 6778899999999999999888999999998654322211110000000 00011223467899999999887 4
Q ss_pred cceEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCC
Q 002250 704 VVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLE 783 (947)
Q Consensus 704 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~ 783 (947)
+++.++. ...++||||+++++|.+.... .....++.+++.++.++| ..+|+||||||+||+++++
T Consensus 97 v~~~~~~----~~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh---~~gi~H~Dl~p~Nill~~~ 161 (198)
T cd05144 97 VPKPIDW----NRHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAY---KHGIIHGDLSEFNILVDDD 161 (198)
T ss_pred CCceeec----CCceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHH---HCCCCcCCCCcccEEEcCC
Confidence 4444442 456899999999998765431 234567889999999999 8999999999999999999
Q ss_pred CCeEEeccccceecc
Q 002250 784 WKPRIADFGLAKIVQ 798 (947)
Q Consensus 784 ~~~kl~DfG~a~~~~ 798 (947)
+.++|+|||.+....
T Consensus 162 ~~~~liDfg~~~~~~ 176 (198)
T cd05144 162 EKIYIIDWPQMVSTD 176 (198)
T ss_pred CcEEEEECCccccCC
Confidence 999999999986443
No 447
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.67 E-value=4.6e-16 Score=160.32 Aligned_cols=142 Identities=22% Similarity=0.297 Sum_probs=114.4
Q ss_pred ccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEEEEecC
Q 002250 635 NLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYCSITSE 714 (947)
Q Consensus 635 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 714 (947)
+.||+|++|.||+|.. +|..|+||+..+...... ..........+.+|+.++..+.|+++.....++...
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~---------~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~ 71 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHP---------ELDERIRRERTRREARIMSRARKAGVNVPAVYFVDP 71 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcCh---------HHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeC
Confidence 5789999999999988 578899998743211000 000011234678899999999999988777777777
Q ss_pred CccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEeccccc
Q 002250 715 DSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFGLA 794 (947)
Q Consensus 715 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a 794 (947)
+..++||||++|++|.+++.... + .+..++.+++.++.++| ..+++|||++|.||+++ ++.++++|||.+
T Consensus 72 ~~~~lv~e~~~G~~L~~~~~~~~-----~-~~~~i~~~i~~~l~~lH---~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a 141 (211)
T PRK14879 72 ENFIIVMEYIEGEPLKDLINSNG-----M-EELELSREIGRLVGKLH---SAGIIHGDLTTSNMILS-GGKIYLIDFGLA 141 (211)
T ss_pred CCCEEEEEEeCCcCHHHHHHhcc-----H-HHHHHHHHHHHHHHHHH---hCCcccCCCCcccEEEE-CCCEEEEECCcc
Confidence 88899999999999999987521 2 77889999999999999 89999999999999999 789999999988
Q ss_pred ee
Q 002250 795 KI 796 (947)
Q Consensus 795 ~~ 796 (947)
..
T Consensus 142 ~~ 143 (211)
T PRK14879 142 EF 143 (211)
T ss_pred cC
Confidence 64
No 448
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.65 E-value=8.5e-16 Score=180.20 Aligned_cols=145 Identities=23% Similarity=0.294 Sum_probs=113.8
Q ss_pred hhccCCcccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
...|...+.||+|+||+||+|.+.. +.+++|+..+... +. .........+.+.+|++++++++|++++..
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~-~~~v~k~~~~~~~--~~-------~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p 401 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLG-RDAVIKERVPKGY--RH-------PELDERLRTERTRAEARLLSEARRAGVPTP 401 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecC-ccceeEEEecccc--cc-------hhHHHHHHHHHHHHHHHHHHhhcccCCCee
Confidence 3455678999999999999998764 4455554321110 00 000111234568899999999999999988
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
..++..+...++||||+++++|.+++. ....++.++++++.||| +.+++|||+||+||++ +++.++
T Consensus 402 ~~~~~~~~~~~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH---~~giiHrDlkp~NILl-~~~~~~ 467 (535)
T PRK09605 402 VIYDVDPEEKTIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLH---KAGIVHGDLTTSNFIV-RDDRLY 467 (535)
T ss_pred EEEEEeCCCCEEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHH---hCCCccCCCChHHEEE-ECCcEE
Confidence 888887788899999999999999886 24568899999999999 8999999999999999 678999
Q ss_pred Eecccccee
Q 002250 788 IADFGLAKI 796 (947)
Q Consensus 788 l~DfG~a~~ 796 (947)
|+|||+++.
T Consensus 468 liDFGla~~ 476 (535)
T PRK09605 468 LIDFGLGKY 476 (535)
T ss_pred EEeCccccc
Confidence 999999875
No 449
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.65 E-value=6.8e-16 Score=157.42 Aligned_cols=138 Identities=24% Similarity=0.302 Sum_probs=108.0
Q ss_pred cccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEEEEecCC
Q 002250 636 LIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYCSITSED 715 (947)
Q Consensus 636 ~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 715 (947)
.||+|+||.||+|.. +++.|++|+..+...... ..........+.+|++++..+.|+++.....++....
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~---------~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~ 70 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHP---------ELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPD 70 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCc---------hHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC
Confidence 489999999999985 478999998643211000 0001122356788999999999887665555556667
Q ss_pred ccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEeccccce
Q 002250 716 SNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFGLAK 795 (947)
Q Consensus 716 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 795 (947)
..++||||++|++|.+++..... .++.+++.++.++| +.+++|||++|.||+++ ++.++++|||.+.
T Consensus 71 ~~~lv~e~~~g~~l~~~~~~~~~---------~~~~~i~~~l~~lH---~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~ 137 (199)
T TIGR03724 71 NKTIVMEYIEGKPLKDVIEEGND---------ELLREIGRLVGKLH---KAGIVHGDLTTSNIIVR-DDKLYLIDFGLGK 137 (199)
T ss_pred CCEEEEEEECCccHHHHHhhcHH---------HHHHHHHHHHHHHH---HCCeecCCCCcceEEEE-CCcEEEEECCCCc
Confidence 78999999999999998765211 68889999999999 89999999999999999 8899999999986
Q ss_pred e
Q 002250 796 I 796 (947)
Q Consensus 796 ~ 796 (947)
.
T Consensus 138 ~ 138 (199)
T TIGR03724 138 Y 138 (199)
T ss_pred C
Confidence 5
No 450
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.64 E-value=5e-17 Score=175.38 Aligned_cols=174 Identities=25% Similarity=0.312 Sum_probs=130.5
Q ss_pred ccEEEEeccCCCChHHHhhh-cCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEeccccc
Q 002250 716 SNLLVYEYLPNGSLWDRLHT-CHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFGLA 794 (947)
Q Consensus 716 ~~~lv~e~~~~gsL~~~l~~-~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a 794 (947)
..|+.|+++.-.+|.+|+.. ......++.....++.|++.|++| ++.+|||+||.||+...+..+||+|||+.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFgl~ 403 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFGLV 403 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhhhe
Confidence 46899999999999999974 345567889999999999999998 58999999999999999999999999999
Q ss_pred eecccCC----CCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHh-CCCCCCCCCCCcccHHHHHHhhccc
Q 002250 795 KIVQTGE----AGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVT-GKRPIVPEFGDSKDIVNWVYSKMDS 869 (947)
Q Consensus 795 ~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 869 (947)
....... .....+..+||..||+||.+.+..|+.++||||+|++++|++. -..+|+. ..
T Consensus 404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er--------~~-------- 467 (516)
T KOG1033|consen 404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFER--------IA-------- 467 (516)
T ss_pred eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHH--------HH--------
Confidence 7665544 1222345579999999999999999999999999999999997 2222210 00
Q ss_pred cccccccccCCCCc-cCHHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 002250 870 RDSMLTVVDPNISE-ILKEDALKVLRIAIHCTNKLPAFRPSMRVVV 914 (947)
Q Consensus 870 ~~~~~~~~d~~~~~-~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~ 914 (947)
.+..+-|..+++ +..+ .+.=+.+..++++..|.+||++.++.
T Consensus 468 --t~~d~r~g~ip~~~~~d-~p~e~~ll~~lls~~p~~RP~~~~~~ 510 (516)
T KOG1033|consen 468 --TLTDIRDGIIPPEFLQD-YPEEYTLLQQLLSPSPEERPSAIEVA 510 (516)
T ss_pred --hhhhhhcCCCChHHhhc-CcHHHHHHHHhcCCCcccCchHHHHh
Confidence 011122222321 2222 22234677899999999999555443
No 451
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.61 E-value=6e-16 Score=178.30 Aligned_cols=208 Identities=23% Similarity=0.323 Sum_probs=140.4
Q ss_pred hccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceE
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKL 707 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 707 (947)
.+|..++.|-.|+||.||.++++ ..+.+|+|+= ..+ .+.+- ++.....|.+|
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~kiN-kq~----------------------lilRn--ilt~a~npfvv-- 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMKIN-KQN----------------------LILRN--ILTFAGNPFVV-- 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhccc-ccc----------------------hhhhc--cccccCCccee--
Confidence 57888899999999999999977 4678888532 000 00000 22222333332
Q ss_pred EEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeE
Q 002250 708 YCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 708 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 787 (947)
|+-...++..+..+.+ ++.+++|+| +.+|+|||+||+|.+++.-|.+|
T Consensus 136 -------------------gDc~tllk~~g~lPvd----------mvla~Eylh---~ygivhrdlkpdnllIT~mGhiK 183 (1205)
T KOG0606|consen 136 -------------------GDCATLLKNIGPLPVD----------MVLAVEYLH---SYGIVHRDLKPDNLLITSMGHIK 183 (1205)
T ss_pred -------------------chhhhhcccCCCCcch----------hhHHhHhhc---cCCeecCCCCCCcceeeeccccc
Confidence 4444445543332222 167899999 89999999999999999999999
Q ss_pred EeccccceecccC------------CCCcc-eecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCC
Q 002250 788 IADFGLAKIVQTG------------EAGDL-THVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFG 854 (947)
Q Consensus 788 l~DfG~a~~~~~~------------~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~ 854 (947)
++|||+++..... ..+.. ...++||+.|+|||++....|...+|+|++|+++||.+-|+.||+++-
T Consensus 184 lTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdt- 262 (1205)
T KOG0606|consen 184 LTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDT- 262 (1205)
T ss_pred ccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCC-
Confidence 9999988633211 01111 224689999999999999999999999999999999999999996541
Q ss_pred CcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCC
Q 002250 855 DSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRP 908 (947)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP 908 (947)
.+++.. ..+.... ..++..+..+.+..+++.+.++++|..|-
T Consensus 263 -peelfg---~visd~i--------~wpE~dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 263 -PEELFG---QVISDDI--------EWPEEDEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred -HHHHHh---hhhhhhc--------cccccCcCCCHHHHHHHHHHHHhChHhhc
Confidence 111111 1111111 11222344456677888899999999995
No 452
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.57 E-value=1.7e-14 Score=145.45 Aligned_cols=153 Identities=22% Similarity=0.215 Sum_probs=101.9
Q ss_pred cccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchh-hhhh-c-----ccCChhhHHHHHHHHhhccccc--c
Q 002250 634 ENLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSST-AILS-K-----RSSRSSEYDAEVATLSAVRHVN--V 704 (947)
Q Consensus 634 ~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~-~~~~-~-----~~~~~~~~~~E~~~l~~l~h~n--i 704 (947)
.+.||+|+||+||+|...+++.||||++.+............. .... . ..........|...+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 4679999999999999888999999998654332211111000 0000 0 0001112246777777775543 4
Q ss_pred ceEEEEEecCCccEEEEeccCCCChHH-HhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCC-CCeEeccCCCCCeEecC
Q 002250 705 VKLYCSITSEDSNLLVYEYLPNGSLWD-RLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFD-RPVIHRDVKSSNILLDL 782 (947)
Q Consensus 705 v~l~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~-~~ivH~Dlkp~NIll~~ 782 (947)
.+.++. ...++||||++++.+.. .+.... .. .....++.+++.++.++| . .+|+||||||+||+++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~---~~-~~~~~~~~~~~~~l~~lh---~~~~ivH~Dl~p~Nili~- 149 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR---LL-EDPEELYDQILELMRKLY---REAGLVHGDLSEYNILVD- 149 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh---hc-ccHHHHHHHHHHHHHHHh---hccCcCcCCCChhhEEEE-
Confidence 455543 24589999999854322 121111 11 456778899999999999 6 8999999999999999
Q ss_pred CCCeEEeccccceecc
Q 002250 783 EWKPRIADFGLAKIVQ 798 (947)
Q Consensus 783 ~~~~kl~DfG~a~~~~ 798 (947)
++.++++|||.+....
T Consensus 150 ~~~~~liDfg~a~~~~ 165 (187)
T cd05119 150 DGKVYIIDVPQAVEID 165 (187)
T ss_pred CCcEEEEECccccccc
Confidence 8999999999996443
No 453
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.53 E-value=8.4e-14 Score=135.12 Aligned_cols=135 Identities=23% Similarity=0.194 Sum_probs=112.2
Q ss_pred CcccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccc--cccceEEEE
Q 002250 633 PENLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRH--VNVVKLYCS 710 (947)
Q Consensus 633 ~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~ 710 (947)
+.+.||+|.++.||++...+ +.++||++.... . ...+.+|+.+++.++| ..+++++++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~------------------~-~~~~~~e~~~~~~l~~~~~~~p~~~~~ 61 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSRE------------------K-GADREREVAILQLLARKGLPVPKVLAS 61 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCC------------------c-hhHHHHHHHHHHHHHHcCCCCCeEEEE
Confidence 35679999999999999864 789999873210 1 3568899999999987 599999999
Q ss_pred EecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEec
Q 002250 711 ITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIAD 790 (947)
Q Consensus 711 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 790 (947)
+..++..+++|||++++.+..+ +......++.+++++++++|.....+++|+|++|+||++++.+.+++.|
T Consensus 62 ~~~~~~~~~v~e~~~g~~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~D 132 (155)
T cd05120 62 GESDGWSYLLMEWIEGETLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIID 132 (155)
T ss_pred cCCCCccEEEEEecCCeecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEe
Confidence 9888889999999988776544 5566677889999999999953335799999999999999989999999
Q ss_pred ccccee
Q 002250 791 FGLAKI 796 (947)
Q Consensus 791 fG~a~~ 796 (947)
||.++.
T Consensus 133 f~~~~~ 138 (155)
T cd05120 133 WEYAGY 138 (155)
T ss_pred cccccC
Confidence 998864
No 454
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.51 E-value=7.5e-16 Score=165.93 Aligned_cols=189 Identities=31% Similarity=0.495 Sum_probs=166.1
Q ss_pred cccCCCceeeCCCCCCCCCCCChhhcccccCcEEEccCccccccCCccCCCCCCCCEEECcCcccccccCccccCCCCCc
Q 002250 130 ENLTNLEFLSLGDNPFDPSPFPMEVLKLEKLYWLYLTNCSVTGQIPEGIGNLTQLQNLELSDNELFGEIPAGIVKLNKLW 209 (947)
Q Consensus 130 ~~l~~L~~L~Ls~n~i~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~ 209 (947)
..+..-...||+.|++.. +|..+..+-.|+.|.|..|.+. .+|..+.++..|++|||+.|+++ ..|..++.|+ |+
T Consensus 72 ~~ltdt~~aDlsrNR~~e--lp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lk 146 (722)
T KOG0532|consen 72 YDLTDTVFADLSRNRFSE--LPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LK 146 (722)
T ss_pred ccccchhhhhcccccccc--CchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ce
Confidence 345555678888888865 5566677778888999999998 88999999999999999999996 8899999886 99
Q ss_pred EEEeecccccccCCccCCCCCCccEEeccCCCCCCCCccccccCCCCEEEccCccCcccCCCCccCCCcCcEEEccCccc
Q 002250 210 QLELYNNSLSGRLPVGFSNLTNLMNFDVSQNRLEGDLSELRFLNQLSSLHLFENQFSGEIPEEFGEFKHLTELSLYTNRL 289 (947)
Q Consensus 210 ~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l 289 (947)
.|-+++|+++ .+|..++.+..|..||.+.|.+...++.+..+.+|+.|.+..|++. .+|+.++.|+ |..||++.|++
T Consensus 147 vli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~slpsql~~l~slr~l~vrRn~l~-~lp~El~~Lp-Li~lDfScNki 223 (722)
T KOG0532|consen 147 VLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQSLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSLP-LIRLDFSCNKI 223 (722)
T ss_pred eEEEecCccc-cCCcccccchhHHHhhhhhhhhhhchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCCc-eeeeecccCce
Confidence 9999999999 8899999999999999999999999999999999999999999998 7788888775 99999999999
Q ss_pred cccCCcCccCcccccccccccccccCCCCCCcccCCccc
Q 002250 290 TGTLPQKLGSWADFNYVDVSENLLTGPIPPDMCKTGAMT 328 (947)
Q Consensus 290 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~l~ 328 (947)
+ .+|-.|.+|..|++|-|.+|.++ ..|..+|....+.
T Consensus 224 s-~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC~kGkVH 260 (722)
T KOG0532|consen 224 S-YLPVDFRKMRHLQVLQLENNPLQ-SPPAQICEKGKVH 260 (722)
T ss_pred e-ecchhhhhhhhheeeeeccCCCC-CChHHHHhcccee
Confidence 9 99999999999999999999998 5677777665543
No 455
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.50 E-value=2.1e-13 Score=141.76 Aligned_cols=149 Identities=17% Similarity=0.162 Sum_probs=108.1
Q ss_pred ccccc-ccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcccccc--ceEEEE
Q 002250 634 ENLIG-KGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNV--VKLYCS 710 (947)
Q Consensus 634 ~~~iG-~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni--v~l~~~ 710 (947)
...|| .|+.|+||.+... +..++||.+.......+ .. .............+.+|++++.+++|++| ++.+++
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~k--v~--~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~ 110 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGK--LS--KDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAA 110 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHh--hh--hhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEee
Confidence 45688 8999999999886 78899998843221000 00 00000111344678899999999998875 677776
Q ss_pred EecCCc-c---EEEEeccCC-CChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCC
Q 002250 711 ITSEDS-N---LLVYEYLPN-GSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWK 785 (947)
Q Consensus 711 ~~~~~~-~---~lv~e~~~~-gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~ 785 (947)
...+.. . ++||||+++ .+|.+++... .++.. ...+++.++.+|| ..+|+||||||.|||++.++.
T Consensus 111 ~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~~---~l~~~----~~~~i~~~l~~lH---~~GI~HrDlkp~NILv~~~~~ 180 (239)
T PRK01723 111 RVVRHGLFYRADILIERIEGARDLVALLQEA---PLSEE----QWQAIGQLIARFH---DAGVYHADLNAHNILLDPDGK 180 (239)
T ss_pred eeeecCcceeeeEEEEecCCCCCHHHHHhcC---CCCHH----HHHHHHHHHHHHH---HCCCCCCCCCchhEEEcCCCC
Confidence 544322 2 599999997 6898888652 33433 3567899999999 899999999999999999999
Q ss_pred eEEeccccceec
Q 002250 786 PRIADFGLAKIV 797 (947)
Q Consensus 786 ~kl~DfG~a~~~ 797 (947)
++|+|||.+...
T Consensus 181 v~LIDfg~~~~~ 192 (239)
T PRK01723 181 FWLIDFDRGELR 192 (239)
T ss_pred EEEEECCCcccC
Confidence 999999998753
No 456
>PLN03150 hypothetical protein; Provisional
Probab=99.47 E-value=4.7e-14 Score=167.02 Aligned_cols=116 Identities=38% Similarity=0.633 Sum_probs=64.6
Q ss_pred cchhhccccccCCCCCcccccccccceeeccCceeeeecCCCCCccCcCcEEECCCCccCCccCCccc-ccccceeeCCC
Q 002250 447 LSSLYLHDNMFSGPLPYSIGSCVSLTDINFAQNSLSGKIPDSLGSLPSLNSLNLSNNKFSGEIPISLT-YPKLSLLDLSN 525 (947)
Q Consensus 447 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~~~L~~L~ls~ 525 (947)
++.|+|++|.+.|.+|..++.+++|+.|+|++|+|+|.+|..++.+++|+.|+|++|+++|.+|..+. +++|+.|+|++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 44455555555555555555555555555555555555555555555555555555555555555443 35555555555
Q ss_pred CcCCCCCCCcccc---cccccccccCCCCCCCCccccCccCC
Q 002250 526 NQLAGPIPEPLNI---KAFIDSFTGNPGLCSKTDEYFKSCSS 564 (947)
Q Consensus 526 N~l~~~~p~~~~~---~~~~~~~~gN~~~c~~~~~~~~~~~s 564 (947)
|+++|.+|..+.. ......+.+|+++|+.+. .+.|..
T Consensus 500 N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~--l~~C~~ 539 (623)
T PLN03150 500 NSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPG--LRACGP 539 (623)
T ss_pred CcccccCChHHhhccccCceEEecCCccccCCCC--CCCCcc
Confidence 5555555544321 112346788999998754 246743
No 457
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.46 E-value=8.5e-15 Score=170.44 Aligned_cols=258 Identities=26% Similarity=0.253 Sum_probs=186.3
Q ss_pred hccCCcccccccCceeEEEEEeCC--CcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcc-ccccc
Q 002250 629 DAVKPENLIGKGGSGNVYKVVLNS--GKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVR-HVNVV 705 (947)
Q Consensus 629 ~~~~~~~~iG~G~~g~Vy~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv 705 (947)
..|.+.+.||+|+|+.|-.+.... ...+|+|.+.... ...........|..+-..+. |+|++
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~---------------~~~~~~~~i~~e~~~~~~~s~h~n~~ 84 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP---------------KSEDSSEHIDTETDIQKKLSKHSNTV 84 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCC---------------CccchhhhcCcccccccccccccccc
Confidence 467788889999999998887643 3445666542111 11122233445677767776 99999
Q ss_pred eEEEEEecCCccEEEEeccCCCChHHHh-hhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCC
Q 002250 706 KLYCSITSEDSNLLVYEYLPNGSLWDRL-HTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEW 784 (947)
Q Consensus 706 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l-~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~ 784 (947)
.+++.....+..+++.||.+++++.+-+ +... ...+....-....|+..++.|+|. ..+++|||+||+|.+++..+
T Consensus 85 ~~~~~~~~~~~~~~~~~~s~g~~~f~~i~~~~~-~~~~~~~~~~~~~ql~s~l~~~H~--~~~~~h~~ikP~n~~l~~s~ 161 (601)
T KOG0590|consen 85 HMIEPSSSPRSYLLSLSYSDGGSLFSKISHPDS-TGTSSSSASRYLPQLNSGLSYLHP--ENGVTHRDIKPSNSLLDESG 161 (601)
T ss_pred ccCCccCCCcccccccCcccccccccccccCCc-cCCCCcchhhhhhhhccCccccCc--ccccccCCCCCccchhccCC
Confidence 9999999999999999999999999988 4422 123344445578889999999995 57899999999999999999
Q ss_pred -CeEEeccccceeccc-CCCCcceecccc-cccccCccccccC-CCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHH
Q 002250 785 -KPRIADFGLAKIVQT-GEAGDLTHVIAG-THGYIAPEYAYTC-KINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIV 860 (947)
Q Consensus 785 -~~kl~DfG~a~~~~~-~~~~~~~~~~~g-t~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~ 860 (947)
..+++|||+|..+.. ..........+| ++.|+|||...+. ...+..|+||.|+++.-+++|..|+...........
T Consensus 162 ~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~ 241 (601)
T KOG0590|consen 162 SALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYS 241 (601)
T ss_pred CcccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccce
Confidence 999999999987776 444445556678 9999999998874 456788999999999999999999865544333333
Q ss_pred HHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 861 NWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 861 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
.|........ ............++..+++..+|+.|.+..++..
T Consensus 242 ~~~~~~~~~~-----------~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 242 SWKSNKGRFT-----------QLPWNSISDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred eecccccccc-----------cCccccCChhhhhcccccccCCchhccccccccc
Confidence 3332210000 1111222334556666888889999998877654
No 458
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.46 E-value=6.5e-14 Score=159.00 Aligned_cols=180 Identities=33% Similarity=0.512 Sum_probs=93.7
Q ss_pred ccCCCceeeCCCCCCCCCCCChhhcccc-cCcEEEccCccccccCCccCCCCCCCCEEECcCcccccccCccccCCCCCc
Q 002250 131 NLTNLEFLSLGDNPFDPSPFPMEVLKLE-KLYWLYLTNCSVTGQIPEGIGNLTQLQNLELSDNELFGEIPAGIVKLNKLW 209 (947)
Q Consensus 131 ~l~~L~~L~Ls~n~i~~~~~~~~~~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~ 209 (947)
.++.++.|++.+|.+.. ++.....+. +|+.|++++|++. .+|..+..+++|+.|++++|++. .+|.....++.|+
T Consensus 114 ~~~~l~~L~l~~n~i~~--i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~ 189 (394)
T COG4886 114 ELTNLTSLDLDNNNITD--IPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLN 189 (394)
T ss_pred cccceeEEecCCccccc--Cccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhh
Confidence 33444444444444443 222233332 4555555555555 33344555555555555555554 3444444555555
Q ss_pred EEEeecccccccCCccCCCCCCccEEeccCCCCCCCCccccccCCCCEEEccCccCcccCCCCccCCCcCcEEEccCccc
Q 002250 210 QLELYNNSLSGRLPVGFSNLTNLMNFDVSQNRLEGDLSELRFLNQLSSLHLFENQFSGEIPEEFGEFKHLTELSLYTNRL 289 (947)
Q Consensus 210 ~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l 289 (947)
.|++++|+++ .+|.....+..|++|++++|++...+..+..+.++..|.+.+|++. ..+..++.+++++.|++++|.+
T Consensus 190 ~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~~~~~~~~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s~n~i 267 (394)
T COG4886 190 NLDLSGNKIS-DLPPEIELLSALEELDLSNNSIIELLSSLSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQI 267 (394)
T ss_pred heeccCCccc-cCchhhhhhhhhhhhhhcCCcceecchhhhhcccccccccCCceee-eccchhccccccceeccccccc
Confidence 5555555555 3444434444455556665554445555555555555556666655 3345555666666666666666
Q ss_pred cccCCcCccCcccccccccccccccCCCC
Q 002250 290 TGTLPQKLGSWADFNYVDVSENLLTGPIP 318 (947)
Q Consensus 290 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p 318 (947)
+ .++. ++.+.+++.|++++|.+....|
T Consensus 268 ~-~i~~-~~~~~~l~~L~~s~n~~~~~~~ 294 (394)
T COG4886 268 S-SISS-LGSLTNLRELDLSGNSLSNALP 294 (394)
T ss_pred c-cccc-ccccCccCEEeccCccccccch
Confidence 5 3333 5566666666666666654443
No 459
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.45 E-value=3.5e-13 Score=152.45 Aligned_cols=159 Identities=22% Similarity=0.200 Sum_probs=106.6
Q ss_pred cccccccCceeEEEEEeCCCcEEEEEEecCCCCCC-CCCc----------------------cchhhhhhcccCChhhHH
Q 002250 634 ENLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGF-RGDY----------------------RSSTAILSKRSSRSSEYD 690 (947)
Q Consensus 634 ~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~~~~----------------------~~~~~~~~~~~~~~~~~~ 690 (947)
.+.||.|++|.||+|++++|+.||||+.+|+.... ..+. ..............-+|.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 46799999999999999999999999997653110 0000 000000000011122577
Q ss_pred HHHHHHhhcc----ccccceEEEEEe-cCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHH-HHHHHhcCC
Q 002250 691 AEVATLSAVR----HVNVVKLYCSIT-SEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAK-GLEYLHHGF 764 (947)
Q Consensus 691 ~E~~~l~~l~----h~niv~l~~~~~-~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~-~l~yLH~~~ 764 (947)
+|++.+.+++ |.+-+.+-..+. ..+..++||||++|++|.++..... ...+ +.+++..++. .+..+|
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~-~~~~---~~~ia~~~~~~~l~ql~--- 274 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDE-AGLD---RKALAENLARSFLNQVL--- 274 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHh-cCCC---HHHHHHHHHHHHHHHHH---
Confidence 7888887773 333333333332 2456799999999999988765321 1122 3456666655 467888
Q ss_pred CCCeEeccCCCCCeEecCCCCeEEeccccceeccc
Q 002250 765 DRPVIHRDVKSSNILLDLEWKPRIADFGLAKIVQT 799 (947)
Q Consensus 765 ~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 799 (947)
..+++|+|++|.||++++++.++++|||++.....
T Consensus 275 ~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 275 RDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred hCCceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 88999999999999999999999999999976643
No 460
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.42 E-value=1.1e-14 Score=156.96 Aligned_cols=179 Identities=27% Similarity=0.466 Sum_probs=140.5
Q ss_pred cCCccccCCCCccEEEcccccccccCCCCCCCCCCcceeccccCCcCCCCCCcccccccccEEEccCccccccCCCCCCC
Q 002250 340 TVPETYANCKSLIRFRVNNNSLSGTIPPGIWSLPNLSIIDLSTNQFEGPVTDDIGNAKSLALLLLANNRFSGELPSKISE 419 (947)
Q Consensus 340 ~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 419 (947)
.+|..+..+-.|+.+.|..|.+. .+|..++++..|.+|||+.|+++ ..|..+..++ |+.|.+++|+++ .+|..++.
T Consensus 89 elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig~ 164 (722)
T KOG0532|consen 89 ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNNKLT-SLPEEIGL 164 (722)
T ss_pred cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEecCccc-cCCccccc
Confidence 33444444455555666666665 67777777777888888888877 3455555554 889999999998 88999998
Q ss_pred CCcceEEEcccCcccCCCCcccccccccchhhccccccCCCCCcccccccccceeeccCceeeeecCCCCCccCcCcEEE
Q 002250 420 ASSLVSIQLSLNQFSGQIPLDIGKLKKLSSLYLHDNMFSGPLPYSIGSCVSLTDINFAQNSLSGKIPDSLGSLPSLNSLN 499 (947)
Q Consensus 420 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 499 (947)
+..|..||.+.|.+. .+|..++++.+|+.|.+..|++. .+|..+. .-.|..||+|.|+++ .+|-.|.+|+.|++|-
T Consensus 165 ~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~-~LpLi~lDfScNkis-~iPv~fr~m~~Lq~l~ 240 (722)
T KOG0532|consen 165 LPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELC-SLPLIRLDFSCNKIS-YLPVDFRKMRHLQVLQ 240 (722)
T ss_pred chhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHh-CCceeeeecccCcee-ecchhhhhhhhheeee
Confidence 899999999999999 78889999999999999999998 6777777 456899999999999 8999999999999999
Q ss_pred CCCCccCCccCCcccc-cc---cceeeCCCCc
Q 002250 500 LSNNKFSGEIPISLTY-PK---LSLLDLSNNQ 527 (947)
Q Consensus 500 Ls~N~l~~~~p~~~~~-~~---L~~L~ls~N~ 527 (947)
|.+|.|+ .+|..+.. .+ .++|+..-.+
T Consensus 241 LenNPLq-SPPAqIC~kGkVHIFKyL~~qA~q 271 (722)
T KOG0532|consen 241 LENNPLQ-SPPAQICEKGKVHIFKYLSTQACQ 271 (722)
T ss_pred eccCCCC-CChHHHHhccceeeeeeecchhcc
Confidence 9999998 56665543 33 3456655553
No 461
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.41 E-value=2.3e-13 Score=154.49 Aligned_cols=196 Identities=35% Similarity=0.523 Sum_probs=86.9
Q ss_pred EEeccCCCCCCCCccccccCCCCEEEccCccCcccCCCCccCCC-cCcEEEccCccccccCCcCccCccccccccccccc
Q 002250 234 NFDVSQNRLEGDLSELRFLNQLSSLHLFENQFSGEIPEEFGEFK-HLTELSLYTNRLTGTLPQKLGSWADFNYVDVSENL 312 (947)
Q Consensus 234 ~L~Ls~N~l~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~-~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 312 (947)
.|+++.|.+......+..++.++.|++.+|.++ .++.....+. +|+.|++++|.+. .+|..++.+++|+.|++++|+
T Consensus 97 ~l~~~~~~~~~~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~ 174 (394)
T COG4886 97 SLDLNLNRLRSNISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFND 174 (394)
T ss_pred eeeccccccccCchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCch
Confidence 345555554444444444455555555555555 3444444442 5555555555555 444445555555555555555
Q ss_pred ccCCCCCCcccCCccceeeecccccCCcCCccccCCCCccEEEcccccccccCCCCCCCCCCcceeccccCCcCCCCCCc
Q 002250 313 LTGPIPPDMCKTGAMTDLLVLQNNFNGTVPETYANCKSLIRFRVNNNSLSGTIPPGIWSLPNLSIIDLSTNQFEGPVTDD 392 (947)
Q Consensus 313 l~~~~p~~~~~~~~l~~L~l~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 392 (947)
++ .+|. .....+.|+.|++++|++. .+|..+.....|++|++++|.+. ..+..
T Consensus 175 l~-~l~~------------------------~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~ 227 (394)
T COG4886 175 LS-DLPK------------------------LLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSS 227 (394)
T ss_pred hh-hhhh------------------------hhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchh
Confidence 54 1111 1113334444444444444 33333323333444444444321 12233
Q ss_pred ccccccccEEEccCccccccCCCCCCCCCcceEEEcccCcccCCCCcccccccccchhhccccccCCCC
Q 002250 393 IGNAKSLALLLLANNRFSGELPSKISEASSLVSIQLSLNQFSGQIPLDIGKLKKLSSLYLHDNMFSGPL 461 (947)
Q Consensus 393 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 461 (947)
+..+..+..+.+.+|++. .++..+..+++++.|++++|+++ .++. ++.+.+|+.|++++|.+...+
T Consensus 228 ~~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s~n~i~-~i~~-~~~~~~l~~L~~s~n~~~~~~ 293 (394)
T COG4886 228 LSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQIS-SISS-LGSLTNLRELDLSGNSLSNAL 293 (394)
T ss_pred hhhcccccccccCCceee-eccchhccccccceecccccccc-cccc-ccccCccCEEeccCccccccc
Confidence 334444444444444443 22334444444444444444444 2222 444444444444444444333
No 462
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.36 E-value=2.5e-12 Score=146.72 Aligned_cols=168 Identities=17% Similarity=0.165 Sum_probs=105.2
Q ss_pred HHHhhccCCcccccccCceeEEEEEeCC-CcEEEEEEecCCCCCC--------------------CCC-c--cchhhhhh
Q 002250 625 KEIIDAVKPENLIGKGGSGNVYKVVLNS-GKELAVKHIWPSNSGF--------------------RGD-Y--RSSTAILS 680 (947)
Q Consensus 625 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~--------------------~~~-~--~~~~~~~~ 680 (947)
+++...|+. +.||.|++|.||+|++++ |+.||||+++|..... .+. + ........
T Consensus 116 ~~~F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~ 194 (537)
T PRK04750 116 EEWFDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFE 194 (537)
T ss_pred HHHHHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHH
Confidence 344556766 789999999999999987 9999999997653110 000 0 00000111
Q ss_pred cccCChhhHHHHHHHHhhcc----ccccceEEEEEec-CCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHH-
Q 002250 681 KRSSRSSEYDAEVATLSAVR----HVNVVKLYCSITS-EDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAA- 754 (947)
Q Consensus 681 ~~~~~~~~~~~E~~~l~~l~----h~niv~l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia- 754 (947)
..-...-+|.+|+..+.+++ +...+.+-.++.+ ....++||||++|+.+.+...-. ....+.. .++...+
T Consensus 195 ~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~-~~g~d~~---~la~~~v~ 270 (537)
T PRK04750 195 KTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALR-AAGTDMK---LLAERGVE 270 (537)
T ss_pred HHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHH-hcCCCHH---HHHHHHHH
Confidence 11112234667777777663 4445555555543 55678999999999998753211 1111211 1222111
Q ss_pred HHHHHHhcCCCCCeEeccCCCCCeEecCCC----CeEEeccccceecccC
Q 002250 755 KGLEYLHHGFDRPVIHRDVKSSNILLDLEW----KPRIADFGLAKIVQTG 800 (947)
Q Consensus 755 ~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~DfG~a~~~~~~ 800 (947)
.-+..+. ..+++|+|+||.||+++.++ .+++.|||++......
T Consensus 271 ~~~~Qif---~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~~ 317 (537)
T PRK04750 271 VFFTQVF---RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNKE 317 (537)
T ss_pred HHHHHHH---hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCHH
Confidence 1233334 67999999999999999888 9999999999876543
No 463
>PLN03150 hypothetical protein; Provisional
Probab=99.36 E-value=1e-12 Score=155.71 Aligned_cols=126 Identities=37% Similarity=0.639 Sum_probs=97.3
Q ss_pred ccccCCCCCc----ccceeeeCC---CC--ceeEeccCCCccccccCcccccCCcccceeeccCccccCcCchhhhcCCC
Q 002250 16 SSWTEANSVC----KFNGIVCDS---NG--LVAEINLPEQQLLGVVPFDSICGLQALQKINLGTNFLYGTITEGLKSCTR 86 (947)
Q Consensus 16 ~sw~~~~~~C----~w~gv~c~~---~~--~v~~l~l~~~~~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~ 86 (947)
.+|. +..|| .|.||+|+. .+ +|+.|+|+++++.|.+| .+++.+++|+.|+|++|.+.|.+|..++.+++
T Consensus 390 ~~W~-g~~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip-~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~ 467 (623)
T PLN03150 390 FGWN-GDPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIP-NDISKLRHLQSINLSGNSIRGNIPPSLGSITS 467 (623)
T ss_pred CCCC-CCCCCCcccccccceeeccCCCCceEEEEEECCCCCccccCC-HHHhCCCCCCEEECCCCcccCcCChHHhCCCC
Confidence 4896 54553 799999962 22 58888888888888887 57888888888888888888888888888888
Q ss_pred ccEEeCcCccCcCCCCC-cccccccceeecCCCCccCccCcccccc-cCCCceeeCCCCC
Q 002250 87 LQVLDLGNNSFSGEVPD-LSMLHELSFLNLNSSGISGKFPWKSLEN-LTNLEFLSLGDNP 144 (947)
Q Consensus 87 L~~L~Ls~n~i~~~~~~-l~~l~~L~~L~L~~n~i~~~~~~~~l~~-l~~L~~L~Ls~n~ 144 (947)
|+.|||++|++++.+|. ++.|++|++|+|++|++++.+| ..+.. +.++..+++++|.
T Consensus 468 L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP-~~l~~~~~~~~~l~~~~N~ 526 (623)
T PLN03150 468 LEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVP-AALGGRLLHRASFNFTDNA 526 (623)
T ss_pred CCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCC-hHHhhccccCceEEecCCc
Confidence 88888888888886665 7888888888888888887777 34443 2455566666664
No 464
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.33 E-value=1.5e-13 Score=144.32 Aligned_cols=226 Identities=19% Similarity=0.180 Sum_probs=129.4
Q ss_pred eeeccCccccCcCchhh----hcCCCccEEeCcCccCcCCCC--CcccccccceeecCCCCccCcc-CcccccccCCCce
Q 002250 65 KINLGTNFLYGTITEGL----KSCTRLQVLDLGNNSFSGEVP--DLSMLHELSFLNLNSSGISGKF-PWKSLENLTNLEF 137 (947)
Q Consensus 65 ~L~L~~n~i~~~~~~~l----~~l~~L~~L~Ls~n~i~~~~~--~l~~l~~L~~L~L~~n~i~~~~-~~~~l~~l~~L~~ 137 (947)
.+.+++-.+..+.-+.+ .++++|++..|.++.+..... ....|++++.||||.|-+..-. .......|++|+.
T Consensus 97 ~~si~nK~vE~iGfDki~akQsn~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~ 176 (505)
T KOG3207|consen 97 VLSISNKQVEFIGFDKIAAKQSNLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLEN 176 (505)
T ss_pred HhhhcCceeEEecHHHHHHHhhhHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchh
Confidence 34444444443333222 345666666666666554332 3556666666666666554311 1123445667777
Q ss_pred eeCCCCCCCCCCCChhhcccccCcEEEccCcccccc-CCccCCCCCCCCEEECcCcccccccCccccCCCCCcEEEeecc
Q 002250 138 LSLGDNPFDPSPFPMEVLKLEKLYWLYLTNCSVTGQ-IPEGIGNLTQLQNLELSDNELFGEIPAGIVKLNKLWQLELYNN 216 (947)
Q Consensus 138 L~Ls~n~i~~~~~~~~~~~l~~L~~L~L~~n~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n 216 (947)
|+|+.|++....-...-..++.|+.|.|+.|.++.. +-..+..+++|+.|+|..|...........-+..|++|||++|
T Consensus 177 LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N 256 (505)
T KOG3207|consen 177 LNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNN 256 (505)
T ss_pred cccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCC
Confidence 777777654321112223456677777777777632 1122345677777777777433343444455666777777777
Q ss_pred cccccCC-ccCCCCCCccEEeccCCCCCCCC--cc-----ccccCCCCEEEccCccCccc-CCCCccCCCcCcEEEccCc
Q 002250 217 SLSGRLP-VGFSNLTNLMNFDVSQNRLEGDL--SE-----LRFLNQLSSLHLFENQFSGE-IPEEFGEFKHLTELSLYTN 287 (947)
Q Consensus 217 ~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~--~~-----l~~l~~L~~L~L~~N~i~~~-~~~~~~~l~~L~~L~L~~N 287 (947)
++-.... ...+.++.|..|+++.+.++.+. +. ....++|+.|++..|+|..- .-..+..+++|++|.+..|
T Consensus 257 ~li~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n 336 (505)
T KOG3207|consen 257 NLIDFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLN 336 (505)
T ss_pred cccccccccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhcccc
Confidence 7763221 34566777777777777776532 11 34567788888888888521 1133555677888888888
Q ss_pred ccc
Q 002250 288 RLT 290 (947)
Q Consensus 288 ~l~ 290 (947)
.++
T Consensus 337 ~ln 339 (505)
T KOG3207|consen 337 YLN 339 (505)
T ss_pred ccc
Confidence 876
No 465
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.30 E-value=4.9e-13 Score=133.20 Aligned_cols=207 Identities=25% Similarity=0.223 Sum_probs=82.2
Q ss_pred cCchhhhcCCCccEEeCcCccCcCCCCCcccccccceeecCCCCccCccCcccccccCCCceeeCCCCCCCCCCCChhhc
Q 002250 76 TITEGLKSCTRLQVLDLGNNSFSGEVPDLSMLHELSFLNLNSSGISGKFPWKSLENLTNLEFLSLGDNPFDPSPFPMEVL 155 (947)
Q Consensus 76 ~~~~~l~~l~~L~~L~Ls~n~i~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~ 155 (947)
.+|-.+..+.+|..+.+|.|.-..+..-...-+.|+++...+..++.. | .+-....+..+.-+.-.....+......
T Consensus 205 ~l~f~l~~f~~l~~~~~s~~~~~~i~~~~~~kptl~t~~v~~s~~~~~-~--~l~pe~~~~D~~~~E~~t~~G~~~~~~d 281 (490)
T KOG1259|consen 205 RLSFNLNAFRNLKTLKFSALSTENIVDIELLKPTLQTICVHNTTIQDV-P--SLLPETILADPSGSEPSTSNGSALVSAD 281 (490)
T ss_pred ccccchHHhhhhheeeeeccchhheeceeecCchhheeeeeccccccc-c--cccchhhhcCccCCCCCccCCceEEecc
Confidence 344455556667777766664332111112224555665555554422 1 1222222211111111111111111111
Q ss_pred ccccCcEEEccCccccccCCccCCCCCCCCEEECcCcccccccCccccCCCCCcEEEeecccccccCCccCCCCCCccEE
Q 002250 156 KLEKLYWLYLTNCSVTGQIPEGIGNLTQLQNLELSDNELFGEIPAGIVKLNKLWQLELYNNSLSGRLPVGFSNLTNLMNF 235 (947)
Q Consensus 156 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 235 (947)
....|++|+|++|.|+ .+.++..-++.++.|++|+|.|... ..+..+++|+.||||+|.++ .+..+-..+-+.++|
T Consensus 282 TWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL 357 (490)
T KOG1259|consen 282 TWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTL 357 (490)
T ss_pred hHhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHhhhcCEeee
Confidence 2233444444444444 3333444444444444444444321 22444444444444444444 233333334444444
Q ss_pred eccCCCCCCCCccccccCCCCEEEccCccCccc-CCCCccCCCcCcEEEccCcccc
Q 002250 236 DVSQNRLEGDLSELRFLNQLSSLHLFENQFSGE-IPEEFGEFKHLTELSLYTNRLT 290 (947)
Q Consensus 236 ~Ls~N~l~~~~~~l~~l~~L~~L~L~~N~i~~~-~~~~~~~l~~L~~L~L~~N~l~ 290 (947)
.|+.|.|+ ..+.+..+-+|..||+++|+|... --..++++|.|++|.|.+|++.
T Consensus 358 ~La~N~iE-~LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~ 412 (490)
T KOG1259|consen 358 KLAQNKIE-TLSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLA 412 (490)
T ss_pred ehhhhhHh-hhhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcc
Confidence 44444443 223333344444444444444311 1123444444444444444444
No 466
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.24 E-value=9.2e-13 Score=149.59 Aligned_cols=243 Identities=26% Similarity=0.280 Sum_probs=135.2
Q ss_pred CCcccceeeccCccccCcCchhhhcCCCccEEeCcCccCcCCCCCcccccccceeecCCCCccCccCcccccccCCCcee
Q 002250 59 GLQALQKINLGTNFLYGTITEGLKSCTRLQVLDLGNNSFSGEVPDLSMLHELSFLNLNSSGISGKFPWKSLENLTNLEFL 138 (947)
Q Consensus 59 ~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~l~~l~~L~~L 138 (947)
.+..++.++++.|.|.. +-..+..+++|+.|+|.+|+|......+..+++|++|+|++|.|+... .+..++.|+.|
T Consensus 70 ~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i~~~l~~~~~L~~L~ls~N~I~~i~---~l~~l~~L~~L 145 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKIENLLSSLVNLQVLDLSFNKITKLE---GLSTLTLLKEL 145 (414)
T ss_pred HhHhHHhhccchhhhhh-hhcccccccceeeeeccccchhhcccchhhhhcchheecccccccccc---chhhccchhhh
Confidence 45556666666666633 334456666777777777766644333666667777777777766442 35566666677
Q ss_pred eCCCCCCCCCCCChhhcccccCcEEEccCccccccCC-ccCCCCCCCCEEECcCcccccccCccccCCCCCcEEEeeccc
Q 002250 139 SLGDNPFDPSPFPMEVLKLEKLYWLYLTNCSVTGQIP-EGIGNLTQLQNLELSDNELFGEIPAGIVKLNKLWQLELYNNS 217 (947)
Q Consensus 139 ~Ls~n~i~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~ 217 (947)
++++|.|.... .+..++.|+.+++++|++...-+ . ...+.+|+.+++.+|.+. ....+..+..+..+++..|.
T Consensus 146 ~l~~N~i~~~~---~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~--~i~~~~~~~~l~~~~l~~n~ 219 (414)
T KOG0531|consen 146 NLSGNLISDIS---GLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIR--EIEGLDLLKKLVLLSLLDNK 219 (414)
T ss_pred eeccCcchhcc---CCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchh--cccchHHHHHHHHhhccccc
Confidence 77777665432 23346666666666666664322 1 355666666666666664 22344444555555666666
Q ss_pred ccccCCccCCCCCC--ccEEeccCCCCCCCCccccccCCCCEEEccCccCcccCCCCccCCCcCcEEEccCcccccc---
Q 002250 218 LSGRLPVGFSNLTN--LMNFDVSQNRLEGDLSELRFLNQLSSLHLFENQFSGEIPEEFGEFKHLTELSLYTNRLTGT--- 292 (947)
Q Consensus 218 l~~~~~~~~~~l~~--L~~L~Ls~N~l~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~--- 292 (947)
++..-+ +..+.. |+.+++++|++......+..+..+..|++.+|++... ..+...+.+..+.+..|++...
T Consensus 220 i~~~~~--l~~~~~~~L~~l~l~~n~i~~~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (414)
T KOG0531|consen 220 ISKLEG--LNELVMLHLRELYLSGNRISRSPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLALSEAI 295 (414)
T ss_pred ceeccC--cccchhHHHHHHhcccCccccccccccccccccccchhhcccccc--ccccccchHHHhccCcchhcchhhh
Confidence 653211 222222 6666666666664445555566666666666666532 2234445555666666655411
Q ss_pred CCcC-ccCcccccccccccccccC
Q 002250 293 LPQK-LGSWADFNYVDVSENLLTG 315 (947)
Q Consensus 293 ~p~~-l~~l~~L~~L~Ls~N~l~~ 315 (947)
.... ....+.++.+.+..|.+..
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~ 319 (414)
T KOG0531|consen 296 SQEYITSAAPTLVTLTLELNPIRK 319 (414)
T ss_pred hccccccccccccccccccCcccc
Confidence 1111 3444555566666665554
No 467
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.23 E-value=1.5e-11 Score=136.36 Aligned_cols=251 Identities=19% Similarity=0.205 Sum_probs=174.2
Q ss_pred hccCCcccccc--cCceeEEEEEe--C-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-ccc
Q 002250 629 DAVKPENLIGK--GGSGNVYKVVL--N-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-RHV 702 (947)
Q Consensus 629 ~~~~~~~~iG~--G~~g~Vy~~~~--~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~ 702 (947)
..+.....+|. |.+|.||.+.. . ++..+|+|+-+.... .......=.+|+...+++ .|+
T Consensus 114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s---------------~p~~~~~k~~~~~s~~~i~~~~ 178 (524)
T KOG0601|consen 114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFS---------------PPLDSKRKLREFLSHHKIDSHE 178 (524)
T ss_pred hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCC---------------CccccccccchhhcccccCccc
Confidence 34566788999 99999999986 3 688899997421111 111222234577777777 599
Q ss_pred ccceEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHH----HHHHHhcCCCCCeEeccCCCCCe
Q 002250 703 NVVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAK----GLEYLHHGFDRPVIHRDVKSSNI 778 (947)
Q Consensus 703 niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~----~l~yLH~~~~~~ivH~Dlkp~NI 778 (947)
+.++.+..+...+..++-+|++ +.++.++.+.... .++....+....+..+ |+.++| +..++|-|+||.||
T Consensus 179 ~~v~~~~~~e~~~~lfiqtE~~-~~sl~~~~~~~~~-~~p~~~l~~~~~~~~~~~~~al~~~h---s~~~~~~~~kp~~i 253 (524)
T KOG0601|consen 179 NPVRDSPAWEGSGILFIQTELC-GESLQSYCHTPCN-FLPDNLLWNSLRDWLSRDVTALSHLH---SNNIVHDDLKPANI 253 (524)
T ss_pred cccccCcccccCCcceeeeccc-cchhHHhhhcccc-cCCchhhhhHHhhhhhcccccccccC---CCcccccccchhhe
Confidence 9999999999999999999999 5788888776322 2344445555555556 999999 99999999999999
Q ss_pred EecCC-CCeEEeccccceecccCCCCcce---ecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCC
Q 002250 779 LLDLE-WKPRIADFGLAKIVQTGEAGDLT---HVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFG 854 (947)
Q Consensus 779 ll~~~-~~~kl~DfG~a~~~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~ 854 (947)
+...+ ...+++|||+............. ....|...|++||...+ .++..+|+|++|.++.|..++..+......
T Consensus 254 ~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~ 332 (524)
T KOG0601|consen 254 FTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKN 332 (524)
T ss_pred ecccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCC
Confidence 99999 88999999999877665432221 11257788999997654 688899999999999999998776532210
Q ss_pred CcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 002250 855 DSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQ 915 (947)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~ 915 (947)
..|. ..+..... .++.+.-..++...+..+++.+|-.|++.+.+..
T Consensus 333 -----~~W~--~~r~~~ip--------~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 333 -----SSWS--QLRQGYIP--------LEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred -----CCcc--ccccccCc--------hhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 0111 01111100 1111112223444777899999999999887764
No 468
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.23 E-value=4.7e-13 Score=137.06 Aligned_cols=242 Identities=22% Similarity=0.252 Sum_probs=147.7
Q ss_pred cccCCcccceeeccCccccCc----CchhhhcCCCccEEeCcCc---cCcCCCCCcccccccceeecCCCCccCccCccc
Q 002250 56 SICGLQALQKINLGTNFLYGT----ITEGLKSCTRLQVLDLGNN---SFSGEVPDLSMLHELSFLNLNSSGISGKFPWKS 128 (947)
Q Consensus 56 ~~~~l~~L~~L~L~~n~i~~~----~~~~l~~l~~L~~L~Ls~n---~i~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~ 128 (947)
.+..+..+++|+|++|.+... +...+.+-++|+..++|+- +....+|+ .|..| .++
T Consensus 25 ~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e--~L~~l---------------~~a 87 (382)
T KOG1909|consen 25 ELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPE--ALKML---------------SKA 87 (382)
T ss_pred HhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHH--HHHHH---------------HHH
Confidence 355677888888888888432 4556677788888888764 22222221 00000 134
Q ss_pred ccccCCCceeeCCCCCCCCCCCCh---hhcccccCcEEEccCccccccCCc-------------cCCCCCCCCEEECcCc
Q 002250 129 LENLTNLEFLSLGDNPFDPSPFPM---EVLKLEKLYWLYLTNCSVTGQIPE-------------GIGNLTQLQNLELSDN 192 (947)
Q Consensus 129 l~~l~~L~~L~Ls~n~i~~~~~~~---~~~~l~~L~~L~L~~n~l~~~~p~-------------~~~~l~~L~~L~Ls~N 192 (947)
+...++|++||||+|.|....++. .+..+..|++|+|.||.+.-.-.. -.+.-+.|+++..+.|
T Consensus 88 L~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rN 167 (382)
T KOG1909|consen 88 LLGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRN 167 (382)
T ss_pred HhcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeecc
Confidence 445556666666666665433222 234456666666666666521111 2233467888888888
Q ss_pred cccccc----CccccCCCCCcEEEeecccccc----cCCccCCCCCCccEEeccCCCCCCC-----CccccccCCCCEEE
Q 002250 193 ELFGEI----PAGIVKLNKLWQLELYNNSLSG----RLPVGFSNLTNLMNFDVSQNRLEGD-----LSELRFLNQLSSLH 259 (947)
Q Consensus 193 ~l~~~~----~~~l~~l~~L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~-----~~~l~~l~~L~~L~ 259 (947)
++.... ...|...+.|+.+.++.|.|.. .+..+|..+++|+.|||.+|-++.. ...++.+++|++|+
T Consensus 168 rlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~ 247 (382)
T KOG1909|consen 168 RLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELN 247 (382)
T ss_pred ccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeec
Confidence 775322 2345556778888888887753 2234567778888888888877642 23466677788888
Q ss_pred ccCccCcccCCCCcc-----CCCcCcEEEccCccccc----cCCcCccCccccccccccccccc
Q 002250 260 LFENQFSGEIPEEFG-----EFKHLTELSLYTNRLTG----TLPQKLGSWADFNYVDVSENLLT 314 (947)
Q Consensus 260 L~~N~i~~~~~~~~~-----~l~~L~~L~L~~N~l~~----~~p~~l~~l~~L~~L~Ls~N~l~ 314 (947)
+++|.+......+|. ..++|+.|.|.+|.++. .+...+...+.|..|+|++|.+.
T Consensus 248 l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 248 LGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred ccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 888887754443332 25778888888888772 23344556778888888888873
No 469
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.22 E-value=1.7e-11 Score=124.20 Aligned_cols=211 Identities=20% Similarity=0.242 Sum_probs=140.8
Q ss_pred HHHHHHHHhhccccccceEEEEEecCC-----ccEEEEeccCCCChHHHhhhc--CCccCCHHHHHHHHHHHHHHHHHHh
Q 002250 689 YDAEVATLSAVRHVNVVKLYCSITSED-----SNLLVYEYLPNGSLWDRLHTC--HKIEMDWVVRYAIAVGAAKGLEYLH 761 (947)
Q Consensus 689 ~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~~ia~~l~yLH 761 (947)
...-..-+-++-|-|||++..|+.+.. ...++.|||+.|++..++++. ....+....-.+++.||..||.|||
T Consensus 114 ~~~vFdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLh 193 (458)
T KOG1266|consen 114 RRAVFDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLH 193 (458)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhh
Confidence 333445556678999999999886643 357899999999999999864 2345666677789999999999999
Q ss_pred cCCCCCeEeccCCCCCeEecCCCCeEEeccccceecccCCC--CcceecccccccccCccccccCCCCCccchHHHHHHH
Q 002250 762 HGFDRPVIHRDVKSSNILLDLEWKPRIADFGLAKIVQTGEA--GDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVL 839 (947)
Q Consensus 762 ~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l 839 (947)
. +.++|+|+++.-+-|++..++-+|+.--.-......... ........+-++|.|||+-.....+.++|||+||...
T Consensus 194 s-~~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcA 272 (458)
T KOG1266|consen 194 S-CDPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCA 272 (458)
T ss_pred c-cCCccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHH
Confidence 5 489999999999999999998888753221111111100 1112233467899999988777788899999999999
Q ss_pred HHHHhCCCCCCCCCCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 002250 840 MELVTGKRPIVPEFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLE 918 (947)
Q Consensus 840 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~ 918 (947)
.||.-+..-- ......-.++- ..........++.- ..++..|++..|..||+|.+.+.+.-
T Consensus 273 lemailEiq~--tnseS~~~~ee-----~ia~~i~~len~lq-----------r~~i~kcl~~eP~~rp~ar~llfHpl 333 (458)
T KOG1266|consen 273 LEMAILEIQS--TNSESKVEVEE-----NIANVIIGLENGLQ-----------RGSITKCLEGEPNGRPDARLLLFHPL 333 (458)
T ss_pred HHHHHheecc--CCCcceeehhh-----hhhhheeeccCccc-----------cCcCcccccCCCCCCcchhhhhcCce
Confidence 9998875321 00000000000 00000001111111 23455899999999999999876543
No 470
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.21 E-value=6.8e-11 Score=117.11 Aligned_cols=127 Identities=20% Similarity=0.234 Sum_probs=94.0
Q ss_pred cccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccc-eEEEEEe
Q 002250 634 ENLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVV-KLYCSIT 712 (947)
Q Consensus 634 ~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~~~~~ 712 (947)
.+.++.|.++.||+++.. ++.+++|+..+.. .....+.+|+.+++.+.+.+++ +++.+..
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~------------------~~~~~~~~E~~~l~~l~~~~~~P~~~~~~~ 63 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGT------------------ELLINRENEAENSKLAAEAGIGPKLYYFDP 63 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCc------------------ccccCHHHHHHHHHHHHHhCCCCceEEEeC
Confidence 356889999999999876 7889999863211 1123467899999998765544 4554433
Q ss_pred cCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCC-----eEeccCCCCCeEecCCCCeE
Q 002250 713 SEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRP-----VIHRDVKSSNILLDLEWKPR 787 (947)
Q Consensus 713 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~-----ivH~Dlkp~NIll~~~~~~k 787 (947)
...++||||++|.++.+.- ......+.+++++++.|| ..+ ++|+|++|.||+++ ++.++
T Consensus 64 --~~~~lv~e~i~G~~l~~~~----------~~~~~~~~~l~~~l~~LH---~~~~~~~~~~HgD~~~~Nil~~-~~~~~ 127 (170)
T cd05151 64 --ETGVLITEFIEGSELLTED----------FSDPENLEKIAKLLKKLH---SSPLPDLVPCHNDLLPGNFLLD-DGRLW 127 (170)
T ss_pred --CCCeEEEEecCCCcccccc----------ccCHHHHHHHHHHHHHHh---CCCCCCceeecCCCCcCcEEEE-CCeEE
Confidence 3458999999998875430 011234568899999999 555 59999999999999 66899
Q ss_pred Eeccccce
Q 002250 788 IADFGLAK 795 (947)
Q Consensus 788 l~DfG~a~ 795 (947)
++|||.+.
T Consensus 128 liDf~~a~ 135 (170)
T cd05151 128 LIDWEYAG 135 (170)
T ss_pred EEeccccc
Confidence 99999875
No 471
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.20 E-value=2e-10 Score=113.71 Aligned_cols=153 Identities=13% Similarity=0.118 Sum_probs=104.6
Q ss_pred ccccccCceeEEEEEeCC-------CcEEEEEEecCCCCCCCCCccchhhhhhc-----ccCChh----hHHHHHHHHhh
Q 002250 635 NLIGKGGSGNVYKVVLNS-------GKELAVKHIWPSNSGFRGDYRSSTAILSK-----RSSRSS----EYDAEVATLSA 698 (947)
Q Consensus 635 ~~iG~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~----~~~~E~~~l~~ 698 (947)
..||.|--+.||.|...+ +..+|||+.+.....++............ ...... ..++|++.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999998543 57999999986665554432211111000 011122 23489999999
Q ss_pred ccc--cccceEEEEEecCCccEEEEeccCCCChHH-HhhhcCCccCCHHHHHHHHHHHHHHHHHH-hcCCCCCeEeccCC
Q 002250 699 VRH--VNVVKLYCSITSEDSNLLVYEYLPNGSLWD-RLHTCHKIEMDWVVRYAIAVGAAKGLEYL-HHGFDRPVIHRDVK 774 (947)
Q Consensus 699 l~h--~niv~l~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~~~~~~~~i~~~ia~~l~yL-H~~~~~~ivH~Dlk 774 (947)
+.. -++.+.+++ ...++||||+.++.+.. .++. ..++......+..+++.+|.++ | ..++||||++
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd---~~~~~~~~~~i~~~i~~~l~~l~H---~~glVHGDLs 152 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD---AKLNDEEMKNAYYQVLSMMKQLYK---ECNLVHADLS 152 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc---cccCHHHHHHHHHHHHHHHHHHHH---hCCeecCCCC
Confidence 953 466666654 56789999997654322 2222 2234445566778999999999 7 7899999999
Q ss_pred CCCeEecCCCCeEEeccccceecc
Q 002250 775 SSNILLDLEWKPRIADFGLAKIVQ 798 (947)
Q Consensus 775 p~NIll~~~~~~kl~DfG~a~~~~ 798 (947)
+.||+++ ++.+.++|||.|....
T Consensus 153 ~~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 153 EYNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred HHHEEEE-CCcEEEEECCCceeCC
Confidence 9999997 4689999999886543
No 472
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.20 E-value=3.7e-12 Score=126.99 Aligned_cols=203 Identities=24% Similarity=0.227 Sum_probs=142.8
Q ss_pred ccccCCcccceeeccCccccCcCchhhhcCCCccEEeCcCccCcCCCCCcccccccceeecCCCC-ccCccCcccccccC
Q 002250 55 DSICGLQALQKINLGTNFLYGTITEGLKSCTRLQVLDLGNNSFSGEVPDLSMLHELSFLNLNSSG-ISGKFPWKSLENLT 133 (947)
Q Consensus 55 ~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~l~~l~~L~~L~L~~n~-i~~~~~~~~l~~l~ 133 (947)
-.+.-+++|.++.++++.-.. +.+.-..=+.|+.+...+.-++.. |.+--.+.+.-+.-+.-. ..|... .......
T Consensus 208 f~l~~f~~l~~~~~s~~~~~~-i~~~~~~kptl~t~~v~~s~~~~~-~~l~pe~~~~D~~~~E~~t~~G~~~-~~~dTWq 284 (490)
T KOG1259|consen 208 FNLNAFRNLKTLKFSALSTEN-IVDIELLKPTLQTICVHNTTIQDV-PSLLPETILADPSGSEPSTSNGSAL-VSADTWQ 284 (490)
T ss_pred cchHHhhhhheeeeeccchhh-eeceeecCchhheeeeeccccccc-ccccchhhhcCccCCCCCccCCceE-EecchHh
Confidence 346677788888887765422 222222235677777776655532 222111222211111111 122211 3445567
Q ss_pred CCceeeCCCCCCCCCCCChhhcccccCcEEEccCccccccCCccCCCCCCCCEEECcCcccccccCccccCCCCCcEEEe
Q 002250 134 NLEFLSLGDNPFDPSPFPMEVLKLEKLYWLYLTNCSVTGQIPEGIGNLTQLQNLELSDNELFGEIPAGIVKLNKLWQLEL 213 (947)
Q Consensus 134 ~L~~L~Ls~n~i~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L 213 (947)
.|++||||+|.|+. +.....-+++++.|++++|.|+.+ +.+..+++|+.||||+|.++ .+..+-.++.+++.|.|
T Consensus 285 ~LtelDLS~N~I~~--iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~L 359 (490)
T KOG1259|consen 285 ELTELDLSGNLITQ--IDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKL 359 (490)
T ss_pred hhhhccccccchhh--hhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHhhhcCEeeeeh
Confidence 79999999999976 455677789999999999999843 35889999999999999997 55566678899999999
Q ss_pred ecccccccCCccCCCCCCccEEeccCCCCCCCC--ccccccCCCCEEEccCccCcc
Q 002250 214 YNNSLSGRLPVGFSNLTNLMNFDVSQNRLEGDL--SELRFLNQLSSLHLFENQFSG 267 (947)
Q Consensus 214 ~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~--~~l~~l~~L~~L~L~~N~i~~ 267 (947)
+.|.|... ..++.+-+|..||+++|+|.... ..+++++.|+.+.|.+|.+.+
T Consensus 360 a~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 360 AQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred hhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccc
Confidence 99999854 56788899999999999998643 468999999999999999984
No 473
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.20 E-value=2.4e-12 Score=146.18 Aligned_cols=271 Identities=24% Similarity=0.254 Sum_probs=177.1
Q ss_pred cccceeeccCccccCcCchhhhcCCCccEEeCcCccCcCCCCCcccccccceeecCCCCccCccCcccccccCCCceeeC
Q 002250 61 QALQKINLGTNFLYGTITEGLKSCTRLQVLDLGNNSFSGEVPDLSMLHELSFLNLNSSGISGKFPWKSLENLTNLEFLSL 140 (947)
Q Consensus 61 ~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~l~~l~~L~~L~L 140 (947)
+.++.++...+.+....-. ...+..++.++|..|.|......+..+++|+.|++.+|+|..... .+..+++|++|+|
T Consensus 49 ~~~~~~~~~~~~~~~~~~~-~~~l~~l~~l~l~~n~i~~~~~~l~~~~~l~~l~l~~n~i~~i~~--~l~~~~~L~~L~l 125 (414)
T KOG0531|consen 49 SDLEEIDLIFNLDGSDEDL-VESLTSLKELNLRQNLIAKILNHLSKLKSLEALDLYDNKIEKIEN--LLSSLVNLQVLDL 125 (414)
T ss_pred chhhhhcchhccccchhhh-HHHhHhHHhhccchhhhhhhhcccccccceeeeeccccchhhccc--chhhhhcchheec
Confidence 3455556555554222111 267788888889999998755668889999999999999985422 2788999999999
Q ss_pred CCCCCCCCCCChhhcccccCcEEEccCccccccCCccCCCCCCCCEEECcCcccccccC-ccccCCCCCcEEEeeccccc
Q 002250 141 GDNPFDPSPFPMEVLKLEKLYWLYLTNCSVTGQIPEGIGNLTQLQNLELSDNELFGEIP-AGIVKLNKLWQLELYNNSLS 219 (947)
Q Consensus 141 s~n~i~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~l~~l~~L~~L~L~~n~l~ 219 (947)
++|.|+... .+..++.|+.|++++|.|+.. ..+..+++|+.+++++|++....+ . ...+.+|+.+++.+|.+.
T Consensus 126 s~N~I~~i~---~l~~l~~L~~L~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~ 199 (414)
T KOG0531|consen 126 SFNKITKLE---GLSTLTLLKELNLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIR 199 (414)
T ss_pred ccccccccc---chhhccchhhheeccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchh
Confidence 999998754 466777799999999998843 466678889999999998874433 2 567778888888888887
Q ss_pred ccCCccCCCCCCccEEeccCCCCCCCCccccccC--CCCEEEccCccCcccCCCCccCCCcCcEEEccCccccccCCcCc
Q 002250 220 GRLPVGFSNLTNLMNFDVSQNRLEGDLSELRFLN--QLSSLHLFENQFSGEIPEEFGEFKHLTELSLYTNRLTGTLPQKL 297 (947)
Q Consensus 220 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~--~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l 297 (947)
.. ..+..+..+..+++..|.++... .+..+. .|+.+++++|.+. ..+..+..+..+..|++.+|++... ..+
T Consensus 200 ~i--~~~~~~~~l~~~~l~~n~i~~~~-~l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~--~~~ 273 (414)
T KOG0531|consen 200 EI--EGLDLLKKLVLLSLLDNKISKLE-GLNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNL--EGL 273 (414)
T ss_pred cc--cchHHHHHHHHhhcccccceecc-CcccchhHHHHHHhcccCccc-cccccccccccccccchhhcccccc--ccc
Confidence 33 33445555556677777766322 222222 2677777777776 3335556666677777777766521 123
Q ss_pred cCcccccccccccccccCCCCCCcccCCccceeeecccccCCcCCc-cccCCCCccEEEcccccccccCCC
Q 002250 298 GSWADFNYVDVSENLLTGPIPPDMCKTGAMTDLLVLQNNFNGTVPE-TYANCKSLIRFRVNNNSLSGTIPP 367 (947)
Q Consensus 298 ~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~l~~L~l~~n~~~~~~p~-~~~~l~~L~~L~L~~n~l~~~~p~ 367 (947)
.....+..+....|.+.... ..... .......++.+.+..|.+....+.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (414)
T KOG0531|consen 274 ERLPKLSELWLNDNKLALSE---------------------AISQEYITSAAPTLVTLTLELNPIRKISSL 323 (414)
T ss_pred cccchHHHhccCcchhcchh---------------------hhhccccccccccccccccccCcccccccc
Confidence 34445555555555554210 01111 144556777777887777655443
No 474
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.15 E-value=3.8e-12 Score=133.83 Aligned_cols=212 Identities=20% Similarity=0.144 Sum_probs=151.5
Q ss_pred cccccccceeecCCCCccCccCcccccccCCCceeeCCCCCCCCC-CCChhhcccccCcEEEccCccccccCCccC-CCC
Q 002250 104 LSMLHELSFLNLNSSGISGKFPWKSLENLTNLEFLSLGDNPFDPS-PFPMEVLKLEKLYWLYLTNCSVTGQIPEGI-GNL 181 (947)
Q Consensus 104 l~~l~~L~~L~L~~n~i~~~~~~~~l~~l~~L~~L~Ls~n~i~~~-~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~-~~l 181 (947)
-+++++|+...|.+..+.....-.....|++++.||||+|-+... ++...+..|++|+.|+|+.|.+.-...... ..+
T Consensus 117 Qsn~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l 196 (505)
T KOG3207|consen 117 QSNLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLL 196 (505)
T ss_pred hhhHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhh
Confidence 467888999999888876322113667889999999999976432 233345678999999999998874333222 256
Q ss_pred CCCCEEECcCccccccc-CccccCCCCCcEEEeecccccccCCccCCCCCCccEEeccCCCCCCCC--ccccccCCCCEE
Q 002250 182 TQLQNLELSDNELFGEI-PAGIVKLNKLWQLELYNNSLSGRLPVGFSNLTNLMNFDVSQNRLEGDL--SELRFLNQLSSL 258 (947)
Q Consensus 182 ~~L~~L~Ls~N~l~~~~-~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~--~~l~~l~~L~~L 258 (947)
++|+.|.|+.|.++... ...+..+++|+.|+|..|..-........-+..|++|||++|++.... .....++.|+.|
T Consensus 197 ~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~L 276 (505)
T KOG3207|consen 197 SHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQL 276 (505)
T ss_pred hhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhh
Confidence 78999999999886322 223456788999999999643344445566788999999999887655 457788889999
Q ss_pred EccCccCccc-CCCC-----ccCCCcCcEEEccCccccc-cCCcCccCcccccccccccccccC
Q 002250 259 HLFENQFSGE-IPEE-----FGEFKHLTELSLYTNRLTG-TLPQKLGSWADFNYVDVSENLLTG 315 (947)
Q Consensus 259 ~L~~N~i~~~-~~~~-----~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~Ls~N~l~~ 315 (947)
+++.+.|..+ .|+. ...+++|++|++..|++.. ..-..+..+++|+.|.+..|.++.
T Consensus 277 nls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln~ 340 (505)
T KOG3207|consen 277 NLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLNK 340 (505)
T ss_pred hccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhcccccccc
Confidence 9999988743 2333 3557889999999999852 112345667788888888888873
No 475
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.15 E-value=1.6e-11 Score=118.95 Aligned_cols=58 Identities=29% Similarity=0.458 Sum_probs=8.4
Q ss_pred CCCccEEeCcCccCcCCCCCcc-cccccceeecCCCCccCccCcccccccCCCceeeCCCCCC
Q 002250 84 CTRLQVLDLGNNSFSGEVPDLS-MLHELSFLNLNSSGISGKFPWKSLENLTNLEFLSLGDNPF 145 (947)
Q Consensus 84 l~~L~~L~Ls~n~i~~~~~~l~-~l~~L~~L~L~~n~i~~~~~~~~l~~l~~L~~L~Ls~n~i 145 (947)
+.++++|+|++|.|+. +..++ .+.+|+.|+|++|.|+.. ..+..+++|++|++++|.|
T Consensus 18 ~~~~~~L~L~~n~I~~-Ie~L~~~l~~L~~L~Ls~N~I~~l---~~l~~L~~L~~L~L~~N~I 76 (175)
T PF14580_consen 18 PVKLRELNLRGNQIST-IENLGATLDKLEVLDLSNNQITKL---EGLPGLPRLKTLDLSNNRI 76 (175)
T ss_dssp -------------------S--TT-TT--EEE-TTS--S-----TT----TT--EEE--SS--
T ss_pred cccccccccccccccc-ccchhhhhcCCCEEECCCCCCccc---cCccChhhhhhcccCCCCC
Confidence 3345555555555552 22333 244444444444444421 1233344444444444444
No 476
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.14 E-value=2.3e-11 Score=117.91 Aligned_cols=83 Identities=34% Similarity=0.462 Sum_probs=21.4
Q ss_pred CCCCCEEECcCcccccccCccccCCCCCcEEEeecccccccCCccC-CCCCCccEEeccCCCCCCC--CccccccCCCCE
Q 002250 181 LTQLQNLELSDNELFGEIPAGIVKLNKLWQLELYNNSLSGRLPVGF-SNLTNLMNFDVSQNRLEGD--LSELRFLNQLSS 257 (947)
Q Consensus 181 l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~--~~~l~~l~~L~~ 257 (947)
+.+|+.|+|++|+|+.. +.+..+++|++|++++|+|+. +...+ ..+++|++|+|++|+|... ...+..+++|+.
T Consensus 41 l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~ 117 (175)
T PF14580_consen 41 LDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRISS-ISEGLDKNLPNLQELYLSNNKISDLNELEPLSSLPKLRV 117 (175)
T ss_dssp -TT--EEE-TTS--S----TT----TT--EEE--SS---S--CHHHHHH-TT--EEE-TTS---SCCCCGGGGG-TT--E
T ss_pred hcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCCc-cccchHHhCCcCCEEECcCCcCCChHHhHHHHcCCCcce
Confidence 44555555555555422 234444455555555555542 22222 2344444444444444331 123334444444
Q ss_pred EEccCccCc
Q 002250 258 LHLFENQFS 266 (947)
Q Consensus 258 L~L~~N~i~ 266 (947)
|+|.+|.++
T Consensus 118 L~L~~NPv~ 126 (175)
T PF14580_consen 118 LSLEGNPVC 126 (175)
T ss_dssp EE-TT-GGG
T ss_pred eeccCCccc
Confidence 444444443
No 477
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.08 E-value=1.2e-09 Score=122.07 Aligned_cols=167 Identities=17% Similarity=0.165 Sum_probs=123.9
Q ss_pred eCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEEEEecCCccEEEEeccCCCCh
Q 002250 650 LNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYCSITSEDSNLLVYEYLPNGSL 729 (947)
Q Consensus 650 ~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 729 (947)
..++.+|.|....... ........+-++.++.++||||+++++.++.++..|+|+|.+ -.|
T Consensus 34 k~~~~~vsVF~~~~~~-----------------~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV--~Pl 94 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSN-----------------GEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERV--RPL 94 (690)
T ss_pred eccCCceEEEEEeCCC-----------------chhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecc--ccH
Confidence 4468888888763211 012344567788899999999999999999999999999998 467
Q ss_pred HHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEeccccceecccCCCCcceecc
Q 002250 730 WDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFGLAKIVQTGEAGDLTHVI 809 (947)
Q Consensus 730 ~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~ 809 (947)
..+++..+ .......+.||+.||.|||+ ..+++|++|.-..|+++..|+.||++|-++........ .....
T Consensus 95 ~~~lk~l~-----~~~v~~Gl~qIl~AL~FL~~--d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~--~~~~~ 165 (690)
T KOG1243|consen 95 ETVLKELG-----KEEVCLGLFQILAALSFLND--DCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA--PAKSL 165 (690)
T ss_pred HHHHHHhH-----HHHHHHHHHHHHHHHHHHhc--cCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc--ccccc
Confidence 77887633 55566678899999999996 77999999999999999999999999998864332221 00111
Q ss_pred cccccccCccccccCCCCCccchHHHHHHHHHHHhCC
Q 002250 810 AGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGK 846 (947)
Q Consensus 810 ~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~ 846 (947)
.--..|..|+.+.... -..|.|-||++++|++.|.
T Consensus 166 ~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 166 YLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred hhhhcccChhhcCccc--cchhhhhHHHHHHHHhCcc
Confidence 1223466666443221 2359999999999999993
No 478
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.07 E-value=1e-10 Score=129.83 Aligned_cols=249 Identities=20% Similarity=0.172 Sum_probs=173.5
Q ss_pred hhccCCcccccccCceeEEEEEeC--CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-ccccc
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLN--SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-RHVNV 704 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~ni 704 (947)
..+|..+..||.|.|+.|++...+ ++..+++|.+........ ....-..|+.+...+ .|.++
T Consensus 264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~---------------~di~sl~ev~l~~~l~~~~~~ 328 (524)
T KOG0601|consen 264 LTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFA---------------SDIFSLGEVILEAILGSHLPS 328 (524)
T ss_pred cCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchH---------------hhhcchhhhhHhhHhhccccc
Confidence 356778889999999999998744 578899997743322111 111123466666666 58899
Q ss_pred ceEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCC-
Q 002250 705 VKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLE- 783 (947)
Q Consensus 705 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~- 783 (947)
++.+..+......|+--||+++++....... ..-++...++++..|++.++.++| ++.++|+|+||+||++..+
T Consensus 329 ~g~~~~W~~~r~~~ip~e~~~~~s~~l~~~~--~~~~d~~~~~~~~~q~~~~l~~i~---s~~~~~~d~~psni~i~~~~ 403 (524)
T KOG0601|consen 329 VGKNSSWSQLRQGYIPLEFCEGGSSSLRSVT--SQMLDEDPRLRLTAQILTALNVIH---SKLFVHLDVKPSNILISNDG 403 (524)
T ss_pred CCCCCCccccccccCchhhhcCcchhhhhHH--HHhcCcchhhhhHHHHHhcccccc---chhhhcccccccceeeccch
Confidence 9988888887888899999999988777632 344677788889999999999999 8999999999999999886
Q ss_pred CCeEEeccccceecccCCCCcceeccccccccc--CccccccCCCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHH
Q 002250 784 WKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYI--APEYAYTCKINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVN 861 (947)
Q Consensus 784 ~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~ 861 (947)
+..+++|||++..+.-.. ....++-+++ +|+......+..+.|+||||.-+.|.++|..-- .....
T Consensus 404 ~~~~~~~~~~~t~~~~~~-----~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls-------~~~~~ 471 (524)
T KOG0601|consen 404 FFSKLGDFGCWTRLAFSS-----GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLS-------ESGVQ 471 (524)
T ss_pred hhhhccccccccccceec-----ccccccccccccchhhccccccccccccccccccccccccCcccC-------ccccc
Confidence 888999999986422111 1122333444 555556667888999999999999999986431 11111
Q ss_pred HHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 002250 862 WVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMRVVVQMLEEA 920 (947)
Q Consensus 862 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev~~~L~~~ 920 (947)
| ..+....++.....- ..+..+...+...++..||.+.+...+.+..
T Consensus 472 ~-----------~~i~~~~~p~~~~~~-~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~ 518 (524)
T KOG0601|consen 472 S-----------LTIRSGDTPNLPGLK-LQLQVLLKVMINPDRKRRPSAVELSLHSEFY 518 (524)
T ss_pred c-----------eeeecccccCCCchH-HhhhhhhhhhcCCccccchhhhhhcccchhh
Confidence 1 111111122222222 4566667778889999999998887665443
No 479
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.04 E-value=2.2e-11 Score=124.95 Aligned_cols=233 Identities=23% Similarity=0.308 Sum_probs=130.9
Q ss_pred CceeEeccCCCcccc----ccCcccccCCcccceeeccCccc---cCcCch-------hhhcCCCccEEeCcCccCcCCC
Q 002250 36 GLVAEINLPEQQLLG----VVPFDSICGLQALQKINLGTNFL---YGTITE-------GLKSCTRLQVLDLGNNSFSGEV 101 (947)
Q Consensus 36 ~~v~~l~l~~~~~~~----~~~~~~~~~l~~L~~L~L~~n~i---~~~~~~-------~l~~l~~L~~L~Ls~n~i~~~~ 101 (947)
.-++.++|+++.+-. .+. ..+...++|+..++++-.. ...+|+ ++..+++|++||||.|-|....
T Consensus 30 ~s~~~l~lsgnt~G~EAa~~i~-~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g 108 (382)
T KOG1909|consen 30 DSLTKLDLSGNTFGTEAARAIA-KVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKG 108 (382)
T ss_pred CceEEEeccCCchhHHHHHHHH-HHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCccc
Confidence 579999999987632 122 4466778899999986332 233444 4566789999999999886432
Q ss_pred C-C----cccccccceeecCCCCccCccC------------cccccccCCCceeeCCCCCCCCCCC---ChhhcccccCc
Q 002250 102 P-D----LSMLHELSFLNLNSSGISGKFP------------WKSLENLTNLEFLSLGDNPFDPSPF---PMEVLKLEKLY 161 (947)
Q Consensus 102 ~-~----l~~l~~L~~L~L~~n~i~~~~~------------~~~l~~l~~L~~L~Ls~n~i~~~~~---~~~~~~l~~L~ 161 (947)
+ . +.+++.|++|.|.+|.+.-.-. .+....-++|+++..+.|.+...+. ...+...+.|+
T Consensus 109 ~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~le 188 (382)
T KOG1909|consen 109 IRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAEAFQSHPTLE 188 (382)
T ss_pred hHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHHHHHhccccc
Confidence 2 1 6778999999999998852111 0112334556666666666654321 12333445555
Q ss_pred EEEccCcccccc----CCccCCCCCCCCEEECcCcccccccCccccCCCCCcEEEeecccccccCCccCCCCCCccEEec
Q 002250 162 WLYLTNCSVTGQ----IPEGIGNLTQLQNLELSDNELFGEIPAGIVKLNKLWQLELYNNSLSGRLPVGFSNLTNLMNFDV 237 (947)
Q Consensus 162 ~L~L~~n~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 237 (947)
.+.++.|.|... +...|..+++|+.|||.+|-++..... .+...++.+++|++|++
T Consensus 189 evr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~--------------------~LakaL~s~~~L~El~l 248 (382)
T KOG1909|consen 189 EVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSV--------------------ALAKALSSWPHLRELNL 248 (382)
T ss_pred eEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHH--------------------HHHHHhcccchheeecc
Confidence 555555554311 112334445555555555544321111 12233444555555555
Q ss_pred cCCCCCCC-----Cccc-cccCCCCEEEccCccCcc----cCCCCccCCCcCcEEEccCccc
Q 002250 238 SQNRLEGD-----LSEL-RFLNQLSSLHLFENQFSG----EIPEEFGEFKHLTELSLYTNRL 289 (947)
Q Consensus 238 s~N~l~~~-----~~~l-~~l~~L~~L~L~~N~i~~----~~~~~~~~l~~L~~L~L~~N~l 289 (947)
++|.++.- ...+ ...++|+.|.+.+|.|+. .+...+...+.|..|+|++|.+
T Consensus 249 ~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 249 GDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred cccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 55555431 1111 224566777777776652 2222345567788888888877
No 480
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.98 E-value=3.9e-09 Score=109.61 Aligned_cols=142 Identities=23% Similarity=0.256 Sum_probs=107.3
Q ss_pred ccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccc--cccceEEEEEe
Q 002250 635 NLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRH--VNVVKLYCSIT 712 (947)
Q Consensus 635 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~ 712 (947)
+.+|.|.++.||++...+|+.+++|....... ......+..|+++++.+.+ ..+.+++.+..
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~----------------~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~ 67 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGAL----------------LPSAHDVAREYRVLRALAGTGVPVPKVLALCE 67 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCccc----------------CcccccHHHHHHHHHHhhCCCCCCCCEEEECC
Confidence 56899999999999987778999998632110 0123467889999999976 34677787776
Q ss_pred cCC---ccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcC--------------------------
Q 002250 713 SED---SNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHG-------------------------- 763 (947)
Q Consensus 713 ~~~---~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~-------------------------- 763 (947)
... ..++||||++|.++.+.+.. ..++...+..++.++++++.+||+.
T Consensus 68 ~~~~~~~~~~v~e~i~G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (223)
T cd05154 68 DPSVLGTPFYVMERVDGRVLRDRLLR---PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRR 144 (223)
T ss_pred CCCccCCceEEEEEeCCEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHH
Confidence 643 56899999999888776532 2356667777888888888888831
Q ss_pred ---------------------------CCCCeEeccCCCCCeEecC--CCCeEEeccccce
Q 002250 764 ---------------------------FDRPVIHRDVKSSNILLDL--EWKPRIADFGLAK 795 (947)
Q Consensus 764 ---------------------------~~~~ivH~Dlkp~NIll~~--~~~~kl~DfG~a~ 795 (947)
....++|+|++|.||+++. ++.+.++||+.+.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~ 205 (223)
T cd05154 145 QYDASRTDEPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELAT 205 (223)
T ss_pred HHHhhcccccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccc
Confidence 0245799999999999998 5668999999875
No 481
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.97 E-value=5.4e-09 Score=99.21 Aligned_cols=139 Identities=25% Similarity=0.324 Sum_probs=99.6
Q ss_pred ccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEEEEecC
Q 002250 635 NLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYCSITSE 714 (947)
Q Consensus 635 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 714 (947)
..+++|+-+.+|.+.+. |.++.+|.=.+. .|+.+. -.......+-.+|+.++++++--.|..-.=+..++
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K--~YR~p~-------LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~ 71 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPK--RYRHPE-------LDEKLRRERTRREARILAKAREAGVPVPIVYDVDP 71 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCc--ccCChH-------HHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcC
Confidence 35789999999999876 445666653221 122110 01112234567899999998655544444456677
Q ss_pred CccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEeccccc
Q 002250 715 DSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFGLA 794 (947)
Q Consensus 715 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a 794 (947)
+...|+|||++|..|.+.+... +..++..|-.-+.-|| ..+|||+|+.++||++..+. +.++|||++
T Consensus 72 ~~~~I~me~I~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH---~~givHGDLTtsNiIl~~~~-i~~IDfGLg 138 (204)
T COG3642 72 DNGLIVMEYIEGELLKDALEEA---------RPDLLREVGRLVGKLH---KAGIVHGDLTTSNIILSGGR-IYFIDFGLG 138 (204)
T ss_pred CCCEEEEEEeCChhHHHHHHhc---------chHHHHHHHHHHHHHH---hcCeecCCCccceEEEeCCc-EEEEECCcc
Confidence 7788999999999999888763 2345556666677899 89999999999999998765 999999998
Q ss_pred ee
Q 002250 795 KI 796 (947)
Q Consensus 795 ~~ 796 (947)
.+
T Consensus 139 ~~ 140 (204)
T COG3642 139 EF 140 (204)
T ss_pred cc
Confidence 74
No 482
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.95 E-value=4e-10 Score=136.28 Aligned_cols=87 Identities=28% Similarity=0.370 Sum_probs=50.5
Q ss_pred hcccccCcEEEccCccccccCCccCCCCCCCCEEECcCcccccccCccccCCCCCcEEEeecccccccCCccCCCCCCcc
Q 002250 154 VLKLEKLYWLYLTNCSVTGQIPEGIGNLTQLQNLELSDNELFGEIPAGIVKLNKLWQLELYNNSLSGRLPVGFSNLTNLM 233 (947)
Q Consensus 154 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 233 (947)
|..++.|..|||++|.=-+.+|..++.|-+|++|+|++..+. .+|..+.+++.|.+|++..+.-...+|.....|.+|+
T Consensus 567 f~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr 645 (889)
T KOG4658|consen 567 FRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLR 645 (889)
T ss_pred HhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhccccc
Confidence 344555555555554444456666666666666666666664 5666666666666666666554444455555566666
Q ss_pred EEeccCCC
Q 002250 234 NFDVSQNR 241 (947)
Q Consensus 234 ~L~Ls~N~ 241 (947)
+|.+....
T Consensus 646 ~L~l~~s~ 653 (889)
T KOG4658|consen 646 VLRLPRSA 653 (889)
T ss_pred EEEeeccc
Confidence 66665544
No 483
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.93 E-value=1.1e-08 Score=96.36 Aligned_cols=151 Identities=20% Similarity=0.264 Sum_probs=106.7
Q ss_pred CcccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEEEEe
Q 002250 633 PENLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYCSIT 712 (947)
Q Consensus 633 ~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 712 (947)
....+-+|+-+.|+++.++ |+...||.-.+ ..|+.+.- .......+-.+|++.+.++.--.|.--.-++.
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~--K~YRHP~L-------D~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~ 80 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFS--KRYRHPAL-------DQKLTRKRTKQEARLLAKCRALGIPAPRLIFI 80 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeeccc--ccccchHH-------HHHHHHHHHHHHHHHHHHHHHhCCCCceEEEE
Confidence 4567889999999999988 78878885422 22332211 11122355678999999886544443344566
Q ss_pred cCCccEEEEeccCC-CChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCC---CeEE
Q 002250 713 SEDSNLLVYEYLPN-GSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEW---KPRI 788 (947)
Q Consensus 713 ~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~---~~kl 788 (947)
+...-.++|||++| .++.+++......+.........+..|-+.+.-|| ...|+|+||..+||++..++ .+.+
T Consensus 81 D~~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH---~ndiiHGDLTTSNill~~~~~~~~~~l 157 (229)
T KOG3087|consen 81 DTYGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLH---DNDIIHGDLTTSNILLRSDGNQITPIL 157 (229)
T ss_pred ecCCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhh---hCCeecccccccceEEecCCCcCceEE
Confidence 66667899999976 47888887653333333333667888888899999 89999999999999997554 4589
Q ss_pred ecccccee
Q 002250 789 ADFGLAKI 796 (947)
Q Consensus 789 ~DfG~a~~ 796 (947)
+|||++..
T Consensus 158 Idfgls~~ 165 (229)
T KOG3087|consen 158 IDFGLSSV 165 (229)
T ss_pred Eeecchhc
Confidence 99999854
No 484
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.90 E-value=4.2e-10 Score=130.88 Aligned_cols=252 Identities=23% Similarity=0.268 Sum_probs=163.7
Q ss_pred hhccCCcccccccCceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccce
Q 002250 628 IDAVKPENLIGKGGSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVK 706 (947)
Q Consensus 628 ~~~~~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 706 (947)
.+.+.+.+.+-+|+++.++-++-. .|...++|+...... ....+.+....+-.++-...||.++.
T Consensus 803 ~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~--------------i~~~~~~s~r~~s~~~i~p~~P~v~~ 868 (1205)
T KOG0606|consen 803 PDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPK--------------IRTNDYESIRSKSNILITPRSPAVVR 868 (1205)
T ss_pred CccceecccccCCCCcccccCCccccccccchhhhccchh--------------hccccccccCCccCccccCCCCceec
Confidence 355666778889999999887633 354455554321110 01111222222322332334566665
Q ss_pred EEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCe
Q 002250 707 LYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKP 786 (947)
Q Consensus 707 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 786 (947)
..-.+......++|++|..+++|...++..+. .+..........+..+.+||| ...+.|||++|.|.+...++..
T Consensus 869 ~~~s~~~rsP~~L~~~~~~~~~~~Skl~~~~~--~saepaRs~i~~~vqs~e~L~---s~~r~h~~~~p~~~l~~~~gh~ 943 (1205)
T KOG0606|consen 869 SFPSFPCRSPLPLVGHYLNGGDLPSKLHNSGC--LSAEPARSPILERVQSLESLH---SSLRKHRDLKPDSLLIAYDGHR 943 (1205)
T ss_pred ccCCCCCCCCcchhhHHhccCCchhhhhcCCC--cccccccchhHHHHhhhhccc---cchhhcccccccchhhcccCCc
Confidence 55445556778999999999999999987542 333333344455678899999 7779999999999999999999
Q ss_pred EEeccccceecccC---------------------------CC--CcceecccccccccCccccccCCCCCccchHHHHH
Q 002250 787 RIADFGLAKIVQTG---------------------------EA--GDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGV 837 (947)
Q Consensus 787 kl~DfG~a~~~~~~---------------------------~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv 837 (947)
+++|||........ .. ........||+.|.|||...+......+|.|+.|+
T Consensus 944 ~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~ 1023 (1205)
T KOG0606|consen 944 PLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGV 1023 (1205)
T ss_pred ccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhh
Confidence 99999843211100 00 01122456899999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCCCCCCCHH
Q 002250 838 VLMELVTGKRPIVPEFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLPAFRPSMR 911 (947)
Q Consensus 838 ~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 911 (947)
+++|.++|..||...... .+ ...+-.+ +...+..+.+...+..+++...+..+|.+|-.|.
T Consensus 1024 ~l~e~l~g~pp~na~tpq--~~----f~ni~~~-------~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1024 CLFEVLTGIPPFNAETPQ--QI----FENILNR-------DIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred hhhhhhcCCCCCCCcchh--hh----hhccccC-------CCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 999999999998543211 11 1111111 1122334445555667777788888899987766
No 485
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.89 E-value=6.8e-09 Score=102.53 Aligned_cols=143 Identities=24% Similarity=0.213 Sum_probs=84.3
Q ss_pred eEEEEEeCCCcEEEEEEecCCCCCCCCCccchhh---------hhhcccCChhhHHHHHHHHhhcccc--ccceEEEEEe
Q 002250 644 NVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTA---------ILSKRSSRSSEYDAEVATLSAVRHV--NVVKLYCSIT 712 (947)
Q Consensus 644 ~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~~~~~ 712 (947)
.||.|...+|..+|||+.+....+++........ ............++|++.|.++..- ++.+.+++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 4899999999999999997655444321000000 0011111235577899999999755 566666552
Q ss_pred cCCccEEEEeccC--CCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHH-HhcCCCCCeEeccCCCCCeEecCCCCeEEe
Q 002250 713 SEDSNLLVYEYLP--NGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEY-LHHGFDRPVIHRDVKSSNILLDLEWKPRIA 789 (947)
Q Consensus 713 ~~~~~~lv~e~~~--~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~y-LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 789 (947)
..++||||++ |..+..+... . ++......+..+++..+.. +| ..+++|+|+.+.||+++++ .+.++
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~-~---~~~~~~~~~~~~il~~~~~~~~---~~givHGDLs~~NIlv~~~-~~~iI 148 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDV-D---LSPEEPKELLEEILEEIIKMLH---KAGIVHGDLSEYNILVDDG-KVYII 148 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHC-G---GGGSTHHHHHHHHHHHHHHHHH---CTTEEESS-STTSEEEETT-CEEE-
T ss_pred ---CCEEEEEecCCCccchhhHHhc-c---ccchhHHHHHHHHHHHHHHHHH---hcCceecCCChhhEEeecc-eEEEE
Confidence 4579999998 5444333322 1 1122234455566664554 57 8899999999999999988 99999
Q ss_pred ccccceecc
Q 002250 790 DFGLAKIVQ 798 (947)
Q Consensus 790 DfG~a~~~~ 798 (947)
|||.|....
T Consensus 149 Df~qav~~~ 157 (188)
T PF01163_consen 149 DFGQAVDSS 157 (188)
T ss_dssp -GTTEEETT
T ss_pred ecCcceecC
Confidence 999886543
No 486
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.86 E-value=1.6e-09 Score=131.12 Aligned_cols=129 Identities=25% Similarity=0.219 Sum_probs=79.3
Q ss_pred ccCcEEEccCccccccCCccCCCCCCCCEEECcCcc--cccccCccccCCCCCcEEEeecccccccCCccCCCCCCccEE
Q 002250 158 EKLYWLYLTNCSVTGQIPEGIGNLTQLQNLELSDNE--LFGEIPAGIVKLNKLWQLELYNNSLSGRLPVGFSNLTNLMNF 235 (947)
Q Consensus 158 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~--l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 235 (947)
...+...+-+|.+. .++.... .++|++|-+..|. +.....+.|..++.|+.|||++|.=-+.+|..++++-+|++|
T Consensus 523 ~~~rr~s~~~~~~~-~~~~~~~-~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL 600 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIE-HIAGSSE-NPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYL 600 (889)
T ss_pred hheeEEEEeccchh-hccCCCC-CCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcc
Confidence 45555666666655 3333332 2356666666664 433333445666677777777666555667777777777777
Q ss_pred eccCCCCCCCCccccccCCCCEEEccCccCcccCCCCccCCCcCcEEEccCcc
Q 002250 236 DVSQNRLEGDLSELRFLNQLSSLHLFENQFSGEIPEEFGEFKHLTELSLYTNR 288 (947)
Q Consensus 236 ~Ls~N~l~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~ 288 (947)
+|++..++.+|..+.++..|.+|++..+.....+|.....+++|++|.+..-.
T Consensus 601 ~L~~t~I~~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 601 DLSDTGISHLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred cccCCCccccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccc
Confidence 77777776666677777777777777666544555666667777777665544
No 487
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.80 E-value=3.3e-09 Score=84.46 Aligned_cols=60 Identities=33% Similarity=0.526 Sum_probs=39.9
Q ss_pred ccchhhccccccCCCCCcccccccccceeeccCceeeeecCCCCCccCcCcEEECCCCcc
Q 002250 446 KLSSLYLHDNMFSGPLPYSIGSCVSLTDINFAQNSLSGKIPDSLGSLPSLNSLNLSNNKF 505 (947)
Q Consensus 446 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 505 (947)
+|++|++++|+++...+..|..+++|++|++++|+++...|+.|.++++|++|++++|+|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 456666666666655556666666777777777777666666667777777777777664
No 488
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.78 E-value=1.4e-08 Score=115.28 Aligned_cols=158 Identities=23% Similarity=0.228 Sum_probs=105.3
Q ss_pred ccccccCceeEEEEEeCCCcEEEEEEecCCCCC-----------------------CCCCccchhhhhhcccCChhhHHH
Q 002250 635 NLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSG-----------------------FRGDYRSSTAILSKRSSRSSEYDA 691 (947)
Q Consensus 635 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~ 691 (947)
+.|+.++-|.||+|++++|+.||||+.+|+... .+-..........+.-...-++.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 679999999999999999999999999886521 111111122222223333445778
Q ss_pred HHHHHhhcc----ccccceEEEEE-ecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHH-HHHHhcCCC
Q 002250 692 EVATLSAVR----HVNVVKLYCSI-TSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKG-LEYLHHGFD 765 (947)
Q Consensus 692 E~~~l~~l~----h~niv~l~~~~-~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~-l~yLH~~~~ 765 (947)
|+.-+.+++ ...-+++-..| +..+...++|||++|-.+.+...-.. ...+ +..++..++++ +..+- .
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~-~g~d---~k~ia~~~~~~f~~q~~---~ 283 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS-AGID---RKELAELLVRAFLRQLL---R 283 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh-cCCC---HHHHHHHHHHHHHHHHH---h
Confidence 888887773 22233343444 33567799999999998888743221 2234 22233333322 33333 5
Q ss_pred CCeEeccCCCCCeEecCCCCeEEeccccceeccc
Q 002250 766 RPVIHRDVKSSNILLDLEWKPRIADFGLAKIVQT 799 (947)
Q Consensus 766 ~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~ 799 (947)
.+++|.|.+|.||+++.+|.+.+.|||+.....+
T Consensus 284 dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 284 DGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred cCccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 7999999999999999999999999999876544
No 489
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.75 E-value=1.2e-07 Score=99.70 Aligned_cols=152 Identities=18% Similarity=0.121 Sum_probs=102.5
Q ss_pred ccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccc--cceEEEEEe
Q 002250 635 NLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVN--VVKLYCSIT 712 (947)
Q Consensus 635 ~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~ 712 (947)
+.+-+.....|+++.+. |+.+.||+....... ...............+.+|...+.++...+ .++.+++..
T Consensus 28 e~v~~~~~rrvvr~~~~-g~~~~vKr~~~~~~~------~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e 100 (268)
T PRK15123 28 EVFRELEGRRTLRFELA-GKSYFLKWHRGTGWG------EIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGE 100 (268)
T ss_pred cEEecCCCceEEEEEEC-CEEEEEEEecCCcHH------HHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEE
Confidence 34444444557777664 789999977322100 000000001122235789999999885333 334455554
Q ss_pred c-----CCccEEEEeccCCC-ChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecC----
Q 002250 713 S-----EDSNLLVYEYLPNG-SLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDL---- 782 (947)
Q Consensus 713 ~-----~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~---- 782 (947)
. ...-++|+|++++. +|.+++......+.+...+..++.+++..+.-|| ..+|+|+|++++|||++.
T Consensus 101 ~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH---~~Gi~HgDL~~~NiLl~~~~~~ 177 (268)
T PRK15123 101 RGSNPATRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMH---AAGINHRDCYICHFLLHLPFPG 177 (268)
T ss_pred ecCCCccceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---HCcCccCCCChhhEEEeccccC
Confidence 3 22468999999886 8999886432334566677789999999999999 899999999999999975
Q ss_pred ---CCCeEEecccccee
Q 002250 783 ---EWKPRIADFGLAKI 796 (947)
Q Consensus 783 ---~~~~kl~DfG~a~~ 796 (947)
++.+.++||+.+..
T Consensus 178 ~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 178 REEDLKLSVIDLHRAQI 194 (268)
T ss_pred CCCCceEEEEECCcccc
Confidence 46799999998864
No 490
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.74 E-value=7.5e-09 Score=82.41 Aligned_cols=59 Identities=41% Similarity=0.544 Sum_probs=28.3
Q ss_pred CCCEEECcCcccccccCccccCCCCCcEEEeecccccccCCccCCCCCCccEEeccCCC
Q 002250 183 QLQNLELSDNELFGEIPAGIVKLNKLWQLELYNNSLSGRLPVGFSNLTNLMNFDVSQNR 241 (947)
Q Consensus 183 ~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 241 (947)
+|++|+|++|+|+...+..|.++++|++|++++|.++...+..|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 34444444444443333444444444555555444444444445555555555555444
No 491
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.74 E-value=6.4e-08 Score=97.63 Aligned_cols=152 Identities=20% Similarity=0.190 Sum_probs=98.2
Q ss_pred cCCcccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcc-----cCChhhHHHHHHHHhhcccc--c
Q 002250 631 VKPENLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKR-----SSRSSEYDAEVATLSAVRHV--N 703 (947)
Q Consensus 631 ~~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~E~~~l~~l~h~--n 703 (947)
..+.+.||.|--+.||.|..+.|.++|||.=+.....++...+......... .......++|.++|.++... .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 3467899999999999999999999999964333222221111111100000 01123467899999999544 5
Q ss_pred cceEEEEEecCCccEEEEeccCCCChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCC
Q 002250 704 VVKLYCSITSEDSNLLVYEYLPNGSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLE 783 (947)
Q Consensus 704 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~ 783 (947)
+.+.+++ +...+||||++|-.|...-- +....-.++..|..-+.-+- ..||||+|+.+-||++++|
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r~-------~~en~~~il~~il~~~~~~~---~~GiVHGDlSefNIlV~~d 238 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLRL-------DVENPDEILDKILEEVRKAY---RRGIVHGDLSEFNILVTED 238 (304)
T ss_pred CCCcccc----ccceeeeehcccceeecccC-------cccCHHHHHHHHHHHHHHHH---HcCccccCCchheEEEecC
Confidence 5555544 45689999998866543221 11112223334444444444 4789999999999999999
Q ss_pred CCeEEecccccee
Q 002250 784 WKPRIADFGLAKI 796 (947)
Q Consensus 784 ~~~kl~DfG~a~~ 796 (947)
|.+.++||--+..
T Consensus 239 g~~~vIDwPQ~v~ 251 (304)
T COG0478 239 GDIVVIDWPQAVP 251 (304)
T ss_pred CCEEEEeCccccc
Confidence 9999999987653
No 492
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.74 E-value=2e-10 Score=127.60 Aligned_cols=175 Identities=29% Similarity=0.282 Sum_probs=91.6
Q ss_pred chhhhcCCCccEEeCcCccCcCCCCCcccccccceeecCCC-------------CccCccCcccccccCCCceeeCCCCC
Q 002250 78 TEGLKSCTRLQVLDLGNNSFSGEVPDLSMLHELSFLNLNSS-------------GISGKFPWKSLENLTNLEFLSLGDNP 144 (947)
Q Consensus 78 ~~~l~~l~~L~~L~Ls~n~i~~~~~~l~~l~~L~~L~L~~n-------------~i~~~~~~~~l~~l~~L~~L~Ls~n~ 144 (947)
|-.|..+.+|++|.|.++.|.....-..--.+|++|...+. .|+...+ .-.|...+.++|.
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~~~GL~~lr~qLe~LIC~~Sl~Al~~v~ascggd~~ns~~------Wn~L~~a~fsyN~ 175 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLSTAKGLQELRHQLEKLICHNSLDALRHVFASCGGDISNSPV------WNKLATASFSYNR 175 (1096)
T ss_pred CceeccccceeeEEecCcchhhhhhhHHHHHhhhhhhhhccHHHHHHHHHHhccccccchh------hhhHhhhhcchhh
Confidence 44566677788888877777642111111123444433222 1111111 1235555566665
Q ss_pred CCCCCCChhhcccccCcEEEccCccccccCCccCCCCCCCCEEECcCcccccccCc-cccCCCCCcEEEeecccccccCC
Q 002250 145 FDPSPFPMEVLKLEKLYWLYLTNCSVTGQIPEGIGNLTQLQNLELSDNELFGEIPA-GIVKLNKLWQLELYNNSLSGRLP 223 (947)
Q Consensus 145 i~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-~l~~l~~L~~L~L~~n~l~~~~~ 223 (947)
+.. +...+.-++.|+.|+|++|+++.. +.+..|++|++|||++|++. .+|. ...++ +|..|.|++|.++..
T Consensus 176 L~~--mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc-~L~~L~lrnN~l~tL-- 247 (1096)
T KOG1859|consen 176 LVL--MDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGC-KLQLLNLRNNALTTL-- 247 (1096)
T ss_pred HHh--HHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc-cccccchhhh-hheeeeecccHHHhh--
Confidence 543 233444555666666666666643 25666666666666666665 3332 22222 266666666666633
Q ss_pred ccCCCCCCccEEeccCCCCCCC--CccccccCCCCEEEccCccCc
Q 002250 224 VGFSNLTNLMNFDVSQNRLEGD--LSELRFLNQLSSLHLFENQFS 266 (947)
Q Consensus 224 ~~~~~l~~L~~L~Ls~N~l~~~--~~~l~~l~~L~~L~L~~N~i~ 266 (947)
..+.+|++|+.|||++|-|.+. ...++.+..|+.|+|.+|.+-
T Consensus 248 ~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 248 RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 3455666666666666666542 234555556666666666653
No 493
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.69 E-value=3.8e-07 Score=99.13 Aligned_cols=169 Identities=21% Similarity=0.314 Sum_probs=128.1
Q ss_pred CceeEEEEEeC-CCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhccccccceEEEEEec----CC
Q 002250 641 GSGNVYKVVLN-SGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHVNVVKLYCSITS----ED 715 (947)
Q Consensus 641 ~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~ 715 (947)
--.+.||+..+ ||..|.+|+++...... ...-..-+++++++.|+|+|++-++|.. +.
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~-----------------~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~ 350 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQS-----------------TNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDL 350 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccC-----------------cccchHHHHHHHHhccCceeehhhhhhhhccCcc
Confidence 44688999954 89999999996432211 1122345788999999999999988863 44
Q ss_pred ccEEEEeccCC-CChHHHhhhc-------------CCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEec
Q 002250 716 SNLLVYEYLPN-GSLWDRLHTC-------------HKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLD 781 (947)
Q Consensus 716 ~~~lv~e~~~~-gsL~~~l~~~-------------~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~ 781 (947)
..++||+|.|+ ++|.+.-... .+...++...|.++.|++.||.++| +.|..-+-|.+++|+++
T Consensus 351 SlvlvYDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIH---ssGLAck~L~~~kIlv~ 427 (655)
T KOG3741|consen 351 SLVLVYDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIH---SSGLACKTLDLKKILVT 427 (655)
T ss_pred eEEEEEecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHH---hcCceeecccHhHeEee
Confidence 56899999986 6777755322 1234677889999999999999999 88999999999999999
Q ss_pred CCCCeEEeccccceecccCCCCcceecccccccccCccccccCCCCCccchHHHHHHHHHHHhCCCC
Q 002250 782 LEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAYTCKINEKSDVYSFGVVLMELVTGKRP 848 (947)
Q Consensus 782 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p 848 (947)
.+.+++|+..|+......+.. |.+.+ -.+-|.=.||.+++-+.||..-
T Consensus 428 G~~RIriS~C~i~Dvl~~d~~----------------~~le~---~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 428 GKMRIRISGCGIMDVLQEDPT----------------EPLES---QQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred CcceEEEecccceeeecCCCC----------------cchhH---HhhhhHHHHHHHHHHHhhcccc
Confidence 999999999998876654431 11111 1346888999999999999643
No 494
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.66 E-value=7.2e-09 Score=104.01 Aligned_cols=205 Identities=21% Similarity=0.181 Sum_probs=114.6
Q ss_pred CcccceeeccCccccCcCc-hhh-hcCCCccEEeCcCccCcC--CCCC-cccccccceeecCCCCccCccCcccc-cccC
Q 002250 60 LQALQKINLGTNFLYGTIT-EGL-KSCTRLQVLDLGNNSFSG--EVPD-LSMLHELSFLNLNSSGISGKFPWKSL-ENLT 133 (947)
Q Consensus 60 l~~L~~L~L~~n~i~~~~~-~~l-~~l~~L~~L~Ls~n~i~~--~~~~-l~~l~~L~~L~L~~n~i~~~~~~~~l-~~l~ 133 (947)
+..++.|.+.++.|-...- ..| ..++.+++|||.+|.|+. ++.. +.+|+.|++|+|+.|.+...+. .+ ..+.
T Consensus 44 ~ra~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~--~lp~p~~ 121 (418)
T KOG2982|consen 44 LRALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIK--SLPLPLK 121 (418)
T ss_pred ccchhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccc--cCccccc
Confidence 3345566666666633221 222 357889999999998875 3333 6888999999999998876554 34 4677
Q ss_pred CCceeeCCCCCCCCCCCChhhcccccCcEEEccCccccccC--CccCCCC-CCCCEEECcCccccc--ccCccccCCCCC
Q 002250 134 NLEFLSLGDNPFDPSPFPMEVLKLEKLYWLYLTNCSVTGQI--PEGIGNL-TQLQNLELSDNELFG--EIPAGIVKLNKL 208 (947)
Q Consensus 134 ~L~~L~Ls~n~i~~~~~~~~~~~l~~L~~L~L~~n~l~~~~--p~~~~~l-~~L~~L~Ls~N~l~~--~~~~~l~~l~~L 208 (947)
+|+.|-|.+..+........+..+++++.|+++.|.+.... .+..... +.+++|.+..|.... ....--.-++++
T Consensus 122 nl~~lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~Fpnv 201 (418)
T KOG2982|consen 122 NLRVLVLNGTGLSWTQSTSSLDDLPKVTELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRIFPNV 201 (418)
T ss_pred ceEEEEEcCCCCChhhhhhhhhcchhhhhhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhhcccc
Confidence 88888888887766556666777888888888888544211 1111111 233344433332210 000001123455
Q ss_pred cEEEeecccccccC-CccCCCCCCccEEeccCCCCCCC--CccccccCCCCEEEccCccCc
Q 002250 209 WQLELYNNSLSGRL-PVGFSNLTNLMNFDVSQNRLEGD--LSELRFLNQLSSLHLFENQFS 266 (947)
Q Consensus 209 ~~L~L~~n~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~--~~~l~~l~~L~~L~L~~N~i~ 266 (947)
..+.+..|.|+... ...+..++.+.-|+|+.|+|... ...+..+++|..|.+++|.+.
T Consensus 202 ~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~ 262 (418)
T KOG2982|consen 202 NSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLS 262 (418)
T ss_pred hheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCccc
Confidence 55556666554321 22344455555555555555432 233445555555555555544
No 495
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.54 E-value=7.8e-07 Score=94.13 Aligned_cols=257 Identities=17% Similarity=0.184 Sum_probs=155.5
Q ss_pred CCcccccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhc-cccccceEEEE
Q 002250 632 KPENLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAV-RHVNVVKLYCS 710 (947)
Q Consensus 632 ~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~ 710 (947)
...+.+|+|+-+.+|-.--- ...+.|+.+..... .-...++.|.+. .||-+-.=+.|
T Consensus 14 ~~gr~LgqGgea~ly~l~e~--~d~VAKIYh~Pppa--------------------~~aqk~a~la~~p~~p~~~~rvaW 71 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGEV--RDQVAKIYHAPPPA--------------------AQAQKVAELAATPDAPLLNYRVAW 71 (637)
T ss_pred CCCccccCCccceeeecchh--hchhheeecCCCch--------------------HHHHHHHHhccCCCCcchhhhhcc
Confidence 34678999999999964311 12344666432211 011123333333 45533321222
Q ss_pred E------ec-CCccEEEEeccCCC-ChHHHhhh----cCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCe
Q 002250 711 I------TS-EDSNLLVYEYLPNG-SLWDRLHT----CHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNI 778 (947)
Q Consensus 711 ~------~~-~~~~~lv~e~~~~g-sL~~~l~~----~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NI 778 (947)
= -+ +....+.|..+++. .+.++... +.....+|...++++..+|.+.+.|| ..|.+-+|+.++|+
T Consensus 72 Pqa~L~G~~~~~~iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH---~~Gh~vGDVn~~~~ 148 (637)
T COG4248 72 PQATLHGGRRGKVIGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLH---EHGHVVGDVNQNSF 148 (637)
T ss_pred cHHHhhCCCccceeEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHH---hcCCcccccCccce
Confidence 1 11 22245778877764 22333321 12234799999999999999999999 88999999999999
Q ss_pred EecCCCCeEEeccccceecccCCCCcceecccccccccCccccc-----cCCCCCccchHHHHHHHHHHHhC-CCCCCCC
Q 002250 779 LLDLEWKPRIADFGLAKIVQTGEAGDLTHVIAGTHGYIAPEYAY-----TCKINEKSDVYSFGVVLMELVTG-KRPIVPE 852 (947)
Q Consensus 779 ll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slGv~l~elltg-~~p~~~~ 852 (947)
|+++++.+.+.|-+.-.....+. ....-+|...|.+||.-. +...+...|.|.+||++++++.| ++||.+.
T Consensus 149 lVsd~~~V~LVdsDsfqi~~ng~---~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI 225 (637)
T COG4248 149 LVSDDSKVVLVDSDSFQINANGT---LHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGI 225 (637)
T ss_pred eeecCceEEEEcccceeeccCCc---eEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcc
Confidence 99999999999865444332222 222346889999999754 22345678999999999999986 8999654
Q ss_pred CC--C-----cccHHHH--HHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCC--CCCCCCHHHHHHHhhcc
Q 002250 853 FG--D-----SKDIVNW--VYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKL--PAFRPSMRVVVQMLEEA 920 (947)
Q Consensus 853 ~~--~-----~~~~~~~--~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~d--P~~RPt~~ev~~~L~~~ 920 (947)
.. + ..++... .+...+.... .-+....-.+-.+..+..+..+|+... +.-|||++..+..|.++
T Consensus 226 ~~~~~ap~p~E~~Ia~g~f~ya~~~~~g~----~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al 300 (637)
T COG4248 226 PLISDAPNPLETDIAHGRFAYASDQRRGL----KPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDAL 300 (637)
T ss_pred cccCCCCCcchhhhhcceeeechhccCCC----CCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHH
Confidence 21 1 1112111 1111111000 001111112334566778888898765 56799999999888763
No 496
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.50 E-value=3.3e-09 Score=118.15 Aligned_cols=187 Identities=27% Similarity=0.288 Sum_probs=118.7
Q ss_pred cCCCccccccCcccccCCcccceeeccCccccCcCchhhhcC-CCccEEeCcCccCcC-------CCCCccc---ccccc
Q 002250 43 LPEQQLLGVVPFDSICGLQALQKINLGTNFLYGTITEGLKSC-TRLQVLDLGNNSFSG-------EVPDLSM---LHELS 111 (947)
Q Consensus 43 l~~~~~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l-~~L~~L~Ls~n~i~~-------~~~~l~~---l~~L~ 111 (947)
.+..+-++ | -+|..+..|+.|-|.++.|.. ...+..+ ..|+.|.-++ .++. -..++.+ -..|.
T Consensus 94 ~pa~~pt~--p-i~ifpF~sLr~LElrg~~L~~--~~GL~~lr~qLe~LIC~~-Sl~Al~~v~ascggd~~ns~~Wn~L~ 167 (1096)
T KOG1859|consen 94 SPARDPTE--P-ISIFPFRSLRVLELRGCDLST--AKGLQELRHQLEKLICHN-SLDALRHVFASCGGDISNSPVWNKLA 167 (1096)
T ss_pred cCCCCCCC--C-ceeccccceeeEEecCcchhh--hhhhHHHHHhhhhhhhhc-cHHHHHHHHHHhccccccchhhhhHh
Confidence 34455555 3 468889999999999999854 2222222 3455554332 2211 1112211 23567
Q ss_pred eeecCCCCccCccCcccccccCCCceeeCCCCCCCCCCCChhhcccccCcEEEccCccccccCCcc-CCCCCCCCEEECc
Q 002250 112 FLNLNSSGISGKFPWKSLENLTNLEFLSLGDNPFDPSPFPMEVLKLEKLYWLYLTNCSVTGQIPEG-IGNLTQLQNLELS 190 (947)
Q Consensus 112 ~L~L~~n~i~~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~-~~~l~~L~~L~Ls 190 (947)
+.+.++|.+.- .. .++.-++.|+.|||++|++.... .+..+++|++|||++|.++ .+|.. ...+ +|+.|.|+
T Consensus 168 ~a~fsyN~L~~-mD-~SLqll~ale~LnLshNk~~~v~---~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc-~L~~L~lr 240 (1096)
T KOG1859|consen 168 TASFSYNRLVL-MD-ESLQLLPALESLNLSHNKFTKVD---NLRRLPKLKHLDLSYNCLR-HVPQLSMVGC-KLQLLNLR 240 (1096)
T ss_pred hhhcchhhHHh-HH-HHHHHHHHhhhhccchhhhhhhH---HHHhcccccccccccchhc-cccccchhhh-hheeeeec
Confidence 77778887752 22 56777888888888888887643 5677888888888888887 44432 2222 48888888
Q ss_pred CcccccccCccccCCCCCcEEEeecccccccCC-ccCCCCCCccEEeccCCCCCC
Q 002250 191 DNELFGEIPAGIVKLNKLWQLELYNNSLSGRLP-VGFSNLTNLMNFDVSQNRLEG 244 (947)
Q Consensus 191 ~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~ 244 (947)
+|.++.. ..+.+|++|+.|||++|-|.+.-. ..+..|..|..|+|.+|.+-.
T Consensus 241 nN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c 293 (1096)
T KOG1859|consen 241 NNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCC 293 (1096)
T ss_pred ccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcccc
Confidence 8887643 456778888888888888875321 124456777888888887754
No 497
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.48 E-value=5.3e-08 Score=109.74 Aligned_cols=151 Identities=18% Similarity=0.314 Sum_probs=102.2
Q ss_pred HHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCCeEEeccccceecccCCCCcc-------eecccccccccCccccccC
Q 002250 752 GAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWKPRIADFGLAKIVQTGEAGDL-------THVIAGTHGYIAPEYAYTC 824 (947)
Q Consensus 752 ~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~ 824 (947)
+++.|+.|+|. +.++||+.|.|++|.++..+..||+.|+.+........... .........|.|||++...
T Consensus 107 ~v~dgl~flh~--sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~ 184 (700)
T KOG2137|consen 107 NVADGLAFLHR--SAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGT 184 (700)
T ss_pred cccchhhhhcc--CcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccc
Confidence 45689999996 78999999999999999999999999998864433111111 1112245679999999998
Q ss_pred CCCCccchHHHHHHHHHHHhCCCCCCCCCCCcccHHHHHHhhccccccccccccCCCCccCHHHHHHHHHHHHhccCCCC
Q 002250 825 KINEKSDVYSFGVVLMELVTGKRPIVPEFGDSKDIVNWVYSKMDSRDSMLTVVDPNISEILKEDALKVLRIAIHCTNKLP 904 (947)
Q Consensus 825 ~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~l~~~cl~~dP 904 (947)
..+.++|+||+||++|.+..|..+.....+. ........ ...+-.......+.+.++.+-+.+.+..++
T Consensus 185 ~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~-~~~~~~~~----------~~~~~~~~~~s~~~p~el~~~l~k~l~~~~ 253 (700)
T KOG2137|consen 185 TNTPASDVFSLGVLIYTIYNGGKSIIAANGG-LLSYSFSR----------NLLNAGAFGYSNNLPSELRESLKKLLNGDS 253 (700)
T ss_pred cccccccceeeeeEEEEEecCCcchhhccCC-cchhhhhh----------cccccccccccccCcHHHHHHHHHHhcCCc
Confidence 8899999999999999999655543222111 00000000 001111112224455567777788899999
Q ss_pred CCCCCHHHHHH
Q 002250 905 AFRPSMRVVVQ 915 (947)
Q Consensus 905 ~~RPt~~ev~~ 915 (947)
..||++.++..
T Consensus 254 ~~rp~~~~l~~ 264 (700)
T KOG2137|consen 254 AVRPTLDLLLS 264 (700)
T ss_pred ccCcchhhhhc
Confidence 99998877654
No 498
>PRK09902 hypothetical protein; Provisional
Probab=98.48 E-value=2.8e-06 Score=84.26 Aligned_cols=144 Identities=22% Similarity=0.121 Sum_probs=104.2
Q ss_pred ccccCceeEEEEEeCCCcEEEEEEecCCCCCCCCCccchhhhhhcccCChhhHHHHHHHHhhcccc--ccceEEEEEe--
Q 002250 637 IGKGGSGNVYKVVLNSGKELAVKHIWPSNSGFRGDYRSSTAILSKRSSRSSEYDAEVATLSAVRHV--NVVKLYCSIT-- 712 (947)
Q Consensus 637 iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~~~~~-- 712 (947)
-|+||-+.|++.... |+.+-+|+.. +.- ++. -........|.+|+..+.++..- .+.+.. ++.
T Consensus 26 ~~rgG~SgV~r~~~~-g~~~ylKrq~--nhl-~~s--------~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~ 92 (216)
T PRK09902 26 YRRNGMSGVQCVERN-GKKLYVKRMT--HHL-FHS--------VRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAV 92 (216)
T ss_pred cCCCCcceEEEEEeC-CcEEEEEecc--Ccc-ccc--------ccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeee
Confidence 367899999998776 4578899762 000 000 01123557899999999999532 244444 332
Q ss_pred -cCC--ccEEEEeccCC-CChHHHhhhcCCccCCHHHHHHHHHHHHHHHHHHhcCCCCCeEeccCCCCCeEecCCCC--e
Q 002250 713 -SED--SNLLVYEYLPN-GSLWDRLHTCHKIEMDWVVRYAIAVGAAKGLEYLHHGFDRPVIHRDVKSSNILLDLEWK--P 786 (947)
Q Consensus 713 -~~~--~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~~~~~ivH~Dlkp~NIll~~~~~--~ 786 (947)
.+. ..+||+|-+++ -+|.+++....-.+.+...+..+..+++..+.-|| ..++.|+|+.+.||+++.++. +
T Consensus 93 k~~~~~rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH---~~Gv~Hgdly~khIll~~~g~~~v 169 (216)
T PRK09902 93 KIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMH---SVNRQHGCCYVRHIYVKTEGKAEA 169 (216)
T ss_pred ccCCceEEEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHhheeecCCCCeeE
Confidence 111 24799998764 58999987644445677888899999999999999 899999999999999986666 9
Q ss_pred EEecccccee
Q 002250 787 RIADFGLAKI 796 (947)
Q Consensus 787 kl~DfG~a~~ 796 (947)
+++||--++.
T Consensus 170 ~lIDlEk~r~ 179 (216)
T PRK09902 170 GFLDLEKSRR 179 (216)
T ss_pred EEEEhhccch
Confidence 9999987764
No 499
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.37 E-value=1.8e-06 Score=97.86 Aligned_cols=158 Identities=18% Similarity=0.209 Sum_probs=95.9
Q ss_pred cccccccCceeEEEEEeCCCcEEEEEEecCCCCCC--------------------CCCccchhhhhhcccCChhhHHHHH
Q 002250 634 ENLIGKGGSGNVYKVVLNSGKELAVKHIWPSNSGF--------------------RGDYRSSTAILSKRSSRSSEYDAEV 693 (947)
Q Consensus 634 ~~~iG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~E~ 693 (947)
.+.||..+.|.||+|++++|+.||||+-+|+-... +.++.-......+.--..-+|..|+
T Consensus 166 ~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA 245 (538)
T KOG1235|consen 166 EEPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA 245 (538)
T ss_pred cchhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence 46799999999999999999999999998765211 0000000000111111223456666
Q ss_pred HHHhhc----cccc---cceEEEEE-ecCCccEEEEeccCCCChHHH--hhhcCCccCCHHHHHHHHHHHHHHHHHHhcC
Q 002250 694 ATLSAV----RHVN---VVKLYCSI-TSEDSNLLVYEYLPNGSLWDR--LHTCHKIEMDWVVRYAIAVGAAKGLEYLHHG 763 (947)
Q Consensus 694 ~~l~~l----~h~n---iv~l~~~~-~~~~~~~lv~e~~~~gsL~~~--l~~~~~~~~~~~~~~~i~~~ia~~l~yLH~~ 763 (947)
+-..+. +|-+ =|++-.++ .-.....++||||+|..+.|. +.+. .++... ++..+.++ |++.-
T Consensus 246 ~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~---gi~~~~---i~~~l~~~--~~~qI 317 (538)
T KOG1235|consen 246 KNAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDKR---GISPHD---ILNKLVEA--YLEQI 317 (538)
T ss_pred HhHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHHc---CCCHHH---HHHHHHHH--HHHHH
Confidence 665555 3545 12222333 234567899999999877765 3332 233332 22222222 22221
Q ss_pred CCCCeEeccCCCCCeEecC----CCCeEEeccccceeccc
Q 002250 764 FDRPVIHRDVKSSNILLDL----EWKPRIADFGLAKIVQT 799 (947)
Q Consensus 764 ~~~~ivH~Dlkp~NIll~~----~~~~kl~DfG~a~~~~~ 799 (947)
...|++|+|-+|.||+++. ++++.+.|||+......
T Consensus 318 f~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~ 357 (538)
T KOG1235|consen 318 FKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH 357 (538)
T ss_pred HhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence 2568999999999999984 67899999999875543
No 500
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.37 E-value=5.7e-06 Score=84.27 Aligned_cols=110 Identities=24% Similarity=0.263 Sum_probs=86.0
Q ss_pred CChhhHHHHHHHHhhcccc--ccceEEEEEecCC----ccEEEEeccCCC-ChHHHhhhcCCccCCHHHHHHHHHHHHHH
Q 002250 684 SRSSEYDAEVATLSAVRHV--NVVKLYCSITSED----SNLLVYEYLPNG-SLWDRLHTCHKIEMDWVVRYAIAVGAAKG 756 (947)
Q Consensus 684 ~~~~~~~~E~~~l~~l~h~--niv~l~~~~~~~~----~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~~~~i~~~ia~~ 756 (947)
.......+|...+.++... .+.+.+++.+... ..++|+|++++. +|.+++..... .+......++.+++..
T Consensus 53 ~~~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~--~~~~~~~~ll~~l~~~ 130 (206)
T PF06293_consen 53 LRRSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ--LDPSQRRELLRALARL 130 (206)
T ss_pred ccchHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc--cchhhHHHHHHHHHHH
Confidence 3455788899988888533 3456666665532 247999999884 79998886333 5566677899999999
Q ss_pred HHHHhcCCCCCeEeccCCCCCeEecCCC---CeEEeccccceecc
Q 002250 757 LEYLHHGFDRPVIHRDVKSSNILLDLEW---KPRIADFGLAKIVQ 798 (947)
Q Consensus 757 l~yLH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~DfG~a~~~~ 798 (947)
++-|| ..+|+|+|+++.|||++.+. .+.++||+-++...
T Consensus 131 i~~lH---~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~ 172 (206)
T PF06293_consen 131 IAKLH---DAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRP 172 (206)
T ss_pred HHHHH---HCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeCC
Confidence 99999 89999999999999999887 89999999887543
Done!