Query 002251
Match_columns 947
No_of_seqs 242 out of 356
Neff 4.3
Searched_HMMs 29240
Date Mon Mar 25 18:43:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002251.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002251hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ypd_A Probable JMJC domain-co 100.0 1E-129 4E-134 1067.8 16.8 353 484-910 20-375 (392)
2 4gjz_A Lysine-specific demethy 99.2 1.5E-11 5E-16 123.9 6.6 36 823-858 197-232 (235)
3 3k2o_A Bifunctional arginine d 99.1 2.5E-10 8.4E-15 125.3 13.9 53 823-875 252-304 (336)
4 2yu1_A JMJC domain-containing 99.1 3.3E-09 1.1E-13 120.5 18.9 83 823-907 262-344 (451)
5 3kv5_D JMJC domain-containing 99.0 2.5E-09 8.5E-14 122.6 16.3 87 824-912 333-419 (488)
6 3kv4_A PHD finger protein 8; e 99.0 3.8E-09 1.3E-13 119.8 17.1 89 824-914 298-386 (447)
7 3k3o_A PHF8, PHD finger protei 99.0 5.5E-09 1.9E-13 116.0 16.4 87 824-913 214-301 (371)
8 3kv9_A JMJC domain-containing 98.9 1.4E-08 4.7E-13 113.7 17.8 87 824-912 242-328 (397)
9 3pua_A GRC5, PHD finger protei 98.9 1.4E-08 4.8E-13 113.5 16.7 87 823-912 240-327 (392)
10 3al5_A HTYW5, JMJC domain-cont 98.8 6.7E-09 2.3E-13 113.4 10.2 42 824-865 237-278 (338)
11 3d8c_A Hypoxia-inducible facto 98.7 4.5E-09 1.5E-13 115.4 3.9 40 823-862 257-297 (349)
12 3pur_A Lysine-specific demethy 98.2 1.1E-05 3.7E-10 93.0 14.0 51 824-874 363-413 (528)
13 2xxz_A Lysine-specific demethy 97.5 0.00015 5.2E-09 79.7 7.8 84 764-866 235-318 (332)
14 3avr_A Lysine-specific demethy 97.5 0.00023 7.9E-09 82.4 9.1 87 764-869 294-380 (531)
15 4ask_A Lysine-specific demethy 97.0 0.00072 2.4E-08 77.7 7.2 85 764-867 269-353 (510)
16 3dxt_A JMJC domain-containing 96.0 0.0065 2.2E-07 67.4 5.9 92 765-868 211-303 (354)
17 3opt_A DNA damage-responsive t 95.4 0.021 7.2E-07 63.7 7.3 91 765-867 254-345 (373)
18 2ox0_A JMJC domain-containing 94.5 0.036 1.2E-06 62.1 6.1 92 765-868 229-321 (381)
19 1vrb_A Putative asparaginyl hy 93.1 0.11 3.9E-06 56.9 6.6 57 824-883 215-281 (342)
20 2d8t_A Dactylidin, ring finger 90.9 0.27 9.1E-06 41.3 4.9 46 191-245 13-58 (71)
21 1yhf_A Hypothetical protein SP 90.7 0.12 4.2E-06 46.1 2.8 58 800-864 57-114 (115)
22 2opk_A Hypothetical protein; p 90.6 0.08 2.8E-06 48.5 1.6 24 829-852 75-98 (112)
23 2pfw_A Cupin 2, conserved barr 90.3 0.1 3.4E-06 46.7 1.8 57 800-864 51-107 (116)
24 3ht1_A REMF protein; cupin fol 90.0 0.17 5.8E-06 46.8 3.2 41 824-864 76-116 (145)
25 3fjs_A Uncharacterized protein 90.0 0.13 4.4E-06 47.1 2.3 54 805-864 57-110 (114)
26 4ayc_A E3 ubiquitin-protein li 89.8 0.5 1.7E-05 44.9 6.4 43 194-245 54-96 (138)
27 2q30_A Uncharacterized protein 89.6 0.11 3.7E-06 45.7 1.5 39 823-863 69-108 (110)
28 2csy_A Zinc finger protein 183 89.4 0.21 7.3E-06 42.9 3.2 48 191-247 13-60 (81)
29 3lag_A Uncharacterized protein 89.3 0.12 4.2E-06 46.6 1.6 24 829-852 61-84 (98)
30 3h8u_A Uncharacterized conserv 89.3 0.18 6.1E-06 45.9 2.7 38 826-863 78-115 (125)
31 1v70_A Probable antibiotics sy 89.2 0.18 6.1E-06 43.4 2.5 38 826-863 66-103 (105)
32 4e2g_A Cupin 2 conserved barre 88.9 0.23 7.8E-06 45.2 3.1 58 800-864 58-115 (126)
33 2ecw_A Tripartite motif-contai 88.5 0.37 1.3E-05 40.9 4.0 52 192-246 18-69 (85)
34 3lrq_A E3 ubiquitin-protein li 88.1 0.24 8.2E-06 44.6 2.6 48 192-246 21-68 (100)
35 2xlg_A SLL1785 protein, CUCA; 88.0 0.27 9.3E-06 51.6 3.4 50 828-877 103-163 (239)
36 2ozj_A Cupin 2, conserved barr 87.8 0.19 6.6E-06 45.1 1.8 49 804-857 58-106 (114)
37 1juh_A Quercetin 2,3-dioxygena 87.8 0.23 7.7E-06 54.4 2.7 40 828-868 292-332 (350)
38 2b8m_A Hypothetical protein MJ 87.7 0.19 6.4E-06 45.4 1.7 40 825-864 63-105 (117)
39 2gu9_A Tetracenomycin polyketi 87.6 0.22 7.6E-06 43.7 2.1 41 824-864 59-99 (113)
40 3ibm_A Cupin 2, conserved barr 87.5 0.22 7.6E-06 48.9 2.2 59 800-864 73-132 (167)
41 2djb_A Polycomb group ring fin 87.4 0.32 1.1E-05 40.9 2.9 46 192-245 14-59 (72)
42 2fqp_A Hypothetical protein BP 87.4 0.26 8.9E-06 43.4 2.4 25 828-852 60-84 (97)
43 3d82_A Cupin 2, conserved barr 86.9 0.3 1E-05 42.3 2.5 28 828-855 69-96 (102)
44 1o5u_A Novel thermotoga mariti 86.8 0.21 7.3E-06 45.5 1.5 31 826-856 67-97 (101)
45 2yur_A Retinoblastoma-binding 86.7 0.34 1.2E-05 41.1 2.7 47 192-244 14-60 (74)
46 2egp_A Tripartite motif-contai 86.7 0.34 1.2E-05 40.9 2.7 52 192-246 11-63 (79)
47 2ecm_A Ring finger and CHY zin 86.6 0.35 1.2E-05 38.1 2.5 46 192-244 4-51 (55)
48 3kgz_A Cupin 2 conserved barre 86.5 0.4 1.4E-05 46.8 3.4 41 824-864 79-119 (156)
49 3h7j_A Bacilysin biosynthesis 85.6 0.3 1E-05 50.4 2.1 59 800-864 163-221 (243)
50 2dip_A Zinc finger SWIM domain 85.0 0.28 9.7E-06 45.3 1.4 36 317-352 29-66 (98)
51 2fc7_A ZZZ3 protein; structure 84.9 0.29 1E-05 43.8 1.4 37 316-352 18-59 (82)
52 1iym_A EL5; ring-H2 finger, ub 84.8 0.78 2.7E-05 36.2 3.8 45 193-244 5-51 (55)
53 2kiz_A E3 ubiquitin-protein li 84.6 0.74 2.5E-05 38.1 3.7 47 191-244 12-59 (69)
54 2ecv_A Tripartite motif-contai 84.3 0.37 1.3E-05 40.9 1.8 52 192-246 18-69 (85)
55 2ecy_A TNF receptor-associated 84.3 0.43 1.5E-05 39.4 2.1 46 192-245 14-59 (66)
56 1y9q_A Transcriptional regulat 84.2 0.36 1.2E-05 47.4 1.9 43 822-865 139-181 (192)
57 2ozi_A Hypothetical protein RP 84.0 0.32 1.1E-05 44.1 1.3 23 830-852 62-84 (98)
58 1lr5_A Auxin binding protein 1 83.7 0.42 1.5E-05 45.9 2.1 25 827-851 88-112 (163)
59 2e5r_A Dystrobrevin alpha; ZZ 83.7 0.36 1.2E-05 41.1 1.4 33 320-352 12-46 (63)
60 2ecj_A Tripartite motif-contai 83.7 1.4 4.7E-05 35.0 4.8 45 192-242 14-58 (58)
61 1tot_A CREB-binding protein; z 83.7 0.29 1E-05 40.3 0.8 33 319-352 6-39 (52)
62 1x4j_A Ring finger protein 38; 83.6 0.67 2.3E-05 39.2 3.0 47 191-244 21-68 (75)
63 3cew_A Uncharacterized cupin p 83.4 0.58 2E-05 42.7 2.8 29 823-851 62-90 (125)
64 2ect_A Ring finger protein 126 83.3 1.1 3.8E-05 37.9 4.3 48 191-245 13-61 (78)
65 2i45_A Hypothetical protein; n 83.1 0.56 1.9E-05 41.6 2.5 38 827-867 67-104 (107)
66 3l2h_A Putative sugar phosphat 82.7 0.52 1.8E-05 45.1 2.3 58 801-863 65-123 (162)
67 2oa2_A BH2720 protein; 1017534 82.5 0.71 2.4E-05 43.8 3.1 25 828-852 89-113 (148)
68 3jzv_A Uncharacterized protein 82.3 0.57 2E-05 46.2 2.4 42 823-864 87-128 (166)
69 2ckl_B Ubiquitin ligase protei 81.7 1.3 4.4E-05 43.1 4.6 48 192-246 53-100 (165)
70 2y43_A E3 ubiquitin-protein li 81.4 1.4 4.7E-05 39.2 4.4 46 192-245 21-66 (99)
71 2ysl_A Tripartite motif-contai 80.6 0.93 3.2E-05 37.7 2.8 48 192-245 19-66 (73)
72 2l0b_A E3 ubiquitin-protein li 80.5 1.4 4.9E-05 38.9 4.1 47 192-245 39-86 (91)
73 4h7l_A Uncharacterized protein 80.5 0.34 1.2E-05 48.3 0.0 45 800-849 62-108 (157)
74 1vj2_A Novel manganese-contain 80.5 0.66 2.3E-05 42.7 2.0 46 801-852 66-111 (126)
75 4axo_A EUTQ, ethanolamine util 80.4 0.77 2.6E-05 45.3 2.5 56 803-865 83-138 (151)
76 2o8q_A Hypothetical protein; c 80.2 0.76 2.6E-05 42.3 2.4 60 800-865 60-120 (134)
77 1chc_A Equine herpes virus-1 r 80.1 1.2 4.1E-05 36.6 3.3 46 192-245 4-49 (68)
78 1x82_A Glucose-6-phosphate iso 79.8 0.96 3.3E-05 45.3 3.1 40 825-864 117-156 (190)
79 2ckl_A Polycomb group ring fin 79.1 1.5 5.2E-05 39.6 3.9 46 192-245 14-59 (108)
80 2ecn_A Ring finger protein 141 79.1 0.67 2.3E-05 38.5 1.4 44 191-244 13-56 (70)
81 2ea6_A Ring finger protein 4; 79.0 1 3.5E-05 36.8 2.5 48 191-245 13-65 (69)
82 4ic3_A E3 ubiquitin-protein li 78.9 1.6 5.5E-05 37.2 3.8 41 192-244 23-63 (74)
83 4i4a_A Similar to unknown prot 78.6 1.2 4E-05 40.5 3.0 56 822-881 67-124 (128)
84 3lwc_A Uncharacterized protein 78.5 0.96 3.3E-05 42.1 2.5 54 804-864 59-113 (119)
85 1t1h_A Gspef-atpub14, armadill 78.5 1.9 6.6E-05 36.4 4.1 46 192-245 7-52 (78)
86 3ng2_A RNF4, snurf, ring finge 78.4 1 3.5E-05 37.2 2.3 48 191-245 8-60 (71)
87 3fl2_A E3 ubiquitin-protein li 77.6 0.89 3E-05 42.1 2.0 47 192-246 51-97 (124)
88 2bnm_A Epoxidase; oxidoreducta 77.6 1 3.4E-05 44.3 2.4 45 800-850 137-185 (198)
89 3l11_A E3 ubiquitin-protein li 77.6 1.4 4.9E-05 40.1 3.3 46 192-245 14-59 (115)
90 3i7d_A Sugar phosphate isomera 77.4 1 3.5E-05 43.8 2.4 58 801-863 62-121 (163)
91 2ep4_A Ring finger protein 24; 77.1 2.6 9E-05 35.2 4.6 46 192-244 14-60 (74)
92 3rns_A Cupin 2 conserved barre 76.8 0.92 3.1E-05 46.3 1.9 48 800-853 170-218 (227)
93 2ecl_A Ring-box protein 2; RNF 76.6 3.4 0.00011 35.8 5.2 32 207-245 42-73 (81)
94 3bcw_A Uncharacterized protein 76.6 0.89 3E-05 42.9 1.7 30 829-858 89-118 (123)
95 1y3t_A Hypothetical protein YX 76.6 1.1 3.7E-05 47.5 2.5 67 800-872 235-301 (337)
96 1z6u_A NP95-like ring finger p 76.6 1.1 3.9E-05 43.4 2.5 47 192-246 77-123 (150)
97 1fi2_A Oxalate oxidase, germin 76.2 1.8 6.1E-05 43.5 3.8 39 827-865 119-157 (201)
98 2xeu_A Ring finger protein 4; 74.9 0.89 3.1E-05 36.6 1.0 32 207-245 22-53 (64)
99 3ztg_A E3 ubiquitin-protein li 74.8 1.9 6.4E-05 37.6 3.1 49 191-245 11-59 (92)
100 1qwr_A Mannose-6-phosphate iso 74.3 1 3.6E-05 48.9 1.7 18 831-848 162-179 (319)
101 1jm7_A BRCA1, breast cancer ty 74.1 1.4 4.7E-05 39.6 2.2 48 192-245 20-67 (112)
102 2f4p_A Hypothetical protein TM 73.9 1.8 6.1E-05 41.3 3.0 35 829-863 89-123 (147)
103 2ct2_A Tripartite motif protei 73.8 2.1 7.2E-05 36.7 3.2 51 191-245 13-65 (88)
104 1zx5_A Mannosephosphate isomer 73.4 1.1 3.9E-05 48.3 1.7 18 831-848 162-179 (300)
105 1o4t_A Putative oxalate decarb 72.3 1.3 4.6E-05 41.2 1.7 31 822-852 91-121 (133)
106 2lri_C Autoimmune regulator; Z 72.0 4 0.00014 35.0 4.4 49 191-244 10-58 (66)
107 1jm7_B BARD1, BRCA1-associated 71.4 2.2 7.6E-05 39.2 2.9 44 192-245 21-64 (117)
108 1g25_A CDK-activating kinase a 70.6 2.8 9.6E-05 34.3 3.1 46 194-245 4-52 (65)
109 3rns_A Cupin 2 conserved barre 70.4 1.5 5.1E-05 44.8 1.7 53 800-858 54-106 (227)
110 1rc6_A Hypothetical protein YL 70.1 1.4 4.7E-05 45.8 1.3 47 801-852 197-243 (261)
111 2ysj_A Tripartite motif-contai 69.3 1.7 5.8E-05 35.3 1.5 45 192-242 19-63 (63)
112 3a1b_A DNA (cytosine-5)-methyl 69.3 3.3 0.00011 41.4 3.8 50 192-244 78-133 (159)
113 1y3t_A Hypothetical protein YX 69.1 2 6.7E-05 45.5 2.3 50 822-872 80-129 (337)
114 3h7j_A Bacilysin biosynthesis 68.9 2 7E-05 44.2 2.3 47 800-852 51-98 (243)
115 2pyt_A Ethanolamine utilizatio 68.4 2.4 8.3E-05 40.3 2.5 35 824-858 90-124 (133)
116 3ql9_A Transcriptional regulat 68.2 2.4 8.2E-05 41.0 2.4 50 192-244 56-110 (129)
117 2lbm_A Transcriptional regulat 68.0 4.6 0.00016 39.6 4.4 49 192-243 62-115 (142)
118 2wfp_A Mannose-6-phosphate iso 67.8 1.8 6.1E-05 48.6 1.7 16 832-847 245-260 (394)
119 1juh_A Quercetin 2,3-dioxygena 67.6 1.9 6.5E-05 47.1 1.8 70 800-875 67-141 (350)
120 1wil_A KIAA1045 protein; ring 67.5 4 0.00014 37.1 3.5 53 191-244 13-75 (89)
121 1sef_A Conserved hypothetical 67.0 2 6.8E-05 45.1 1.8 43 805-852 204-246 (274)
122 4ap4_A E3 ubiquitin ligase RNF 66.8 3.8 0.00013 37.3 3.5 46 192-244 71-121 (133)
123 1v87_A Deltex protein 2; ring- 66.4 2 6.8E-05 38.9 1.5 37 207-245 55-91 (114)
124 2pv0_B DNA (cytosine-5)-methyl 66.2 4 0.00014 46.0 4.1 50 192-244 92-147 (386)
125 2l5u_A Chromodomain-helicase-D 66.0 5 0.00017 33.6 3.7 49 191-244 9-57 (61)
126 1rmd_A RAG1; V(D)J recombinati 65.7 2.6 8.8E-05 38.5 2.1 46 192-245 22-67 (116)
127 1pmi_A PMI, phosphomannose iso 65.5 2.1 7.1E-05 48.8 1.7 16 831-846 270-285 (440)
128 2lv9_A Histone-lysine N-methyl 64.9 4.5 0.00015 36.9 3.5 47 192-243 27-74 (98)
129 2vpv_A Protein MIF2, MIF2P; nu 64.4 3.3 0.00011 41.4 2.7 30 823-852 124-153 (166)
130 4e2q_A Ureidoglycine aminohydr 64.3 2.2 7.7E-05 45.6 1.6 30 822-851 220-249 (266)
131 4diq_A Lysine-specific demethy 64.3 4 0.00014 47.2 3.8 42 822-863 223-266 (489)
132 2xdv_A MYC-induced nuclear ant 63.7 4.1 0.00014 46.4 3.6 31 821-851 193-223 (442)
133 2vqa_A SLL1358 protein, MNCA; 63.2 4.5 0.00015 43.6 3.7 53 828-881 279-331 (361)
134 2d40_A Z3393, putative gentisa 63.2 3.4 0.00012 45.4 2.8 40 824-863 136-175 (354)
135 1e4u_A Transcriptional repress 62.7 3.8 0.00013 35.8 2.5 48 192-246 10-60 (78)
136 3hct_A TNF receptor-associated 62.4 2.5 8.5E-05 38.9 1.3 45 192-244 17-61 (118)
137 2yho_A E3 ubiquitin-protein li 61.2 6.3 0.00021 34.2 3.6 42 192-245 17-58 (79)
138 1bor_A Transcription factor PM 61.0 3.7 0.00013 33.1 1.9 42 192-245 5-46 (56)
139 1sq4_A GLXB, glyoxylate-induce 60.7 2.9 9.8E-05 44.4 1.6 43 805-852 91-133 (278)
140 4ap4_A E3 ubiquitin ligase RNF 60.2 4.6 0.00016 36.8 2.7 46 193-245 7-57 (133)
141 3o36_A Transcription intermedi 60.1 3.6 0.00012 41.0 2.1 48 192-244 3-50 (184)
142 2ecg_A Baculoviral IAP repeat- 58.9 6.7 0.00023 33.3 3.3 42 192-245 24-65 (75)
143 1fp0_A KAP-1 corepressor; PHD 58.8 7.2 0.00025 35.4 3.6 49 191-244 23-71 (88)
144 3u5n_A E3 ubiquitin-protein li 58.6 3.7 0.00013 41.7 2.0 50 191-245 5-54 (207)
145 3nw4_A Gentisate 1,2-dioxygena 58.5 4.4 0.00015 45.3 2.6 29 824-852 139-167 (368)
146 3bu7_A Gentisate 1,2-dioxygena 58.5 4.3 0.00015 45.7 2.6 29 823-851 328-356 (394)
147 3knv_A TNF receptor-associated 58.1 2.1 7.1E-05 41.3 -0.0 45 192-244 30-74 (141)
148 1dgw_A Canavalin; duplicated s 57.0 4.8 0.00017 39.7 2.4 27 826-852 82-108 (178)
149 1zrr_A E-2/E-2' protein; nicke 56.1 7.7 0.00026 39.1 3.7 25 828-852 123-147 (179)
150 3dpl_R Ring-box protein 1; ubi 56.1 4.3 0.00015 37.5 1.7 29 209-244 69-97 (106)
151 1vr3_A Acireductone dioxygenas 56.0 5.9 0.0002 40.5 2.9 37 828-864 128-164 (191)
152 1j58_A YVRK protein; cupin, de 55.8 6.7 0.00023 42.7 3.5 55 826-881 300-354 (385)
153 1wgm_A Ubiquitin conjugation f 55.7 8.3 0.00028 34.9 3.5 45 192-244 21-65 (98)
154 2e6s_A E3 ubiquitin-protein li 54.9 8 0.00027 34.0 3.2 48 195-244 28-76 (77)
155 2y1n_A E3 ubiquitin-protein li 54.4 4.6 0.00016 45.5 2.0 46 193-246 332-377 (389)
156 1wg2_A Zinc finger (AN1-like) 54.3 9.8 0.00033 32.9 3.5 35 191-230 13-47 (64)
157 1sfn_A Conserved hypothetical 53.9 4.3 0.00015 42.0 1.5 31 823-853 82-112 (246)
158 2d5f_A Glycinin A3B4 subunit; 53.9 5.6 0.00019 46.0 2.6 33 832-864 118-150 (493)
159 2yql_A PHD finger protein 21A; 53.2 2.7 9.4E-05 34.4 -0.1 49 191-244 7-55 (56)
160 2vje_A E3 ubiquitin-protein li 53.1 5.3 0.00018 33.2 1.7 48 192-245 7-54 (64)
161 2ea5_A Cell growth regulator w 53.0 12 0.0004 31.6 3.8 42 191-244 13-54 (68)
162 2vqa_A SLL1358 protein, MNCA; 52.5 4.1 0.00014 43.8 1.2 25 827-851 96-120 (361)
163 3es1_A Cupin 2, conserved barr 51.5 6.4 0.00022 39.4 2.3 35 828-863 119-153 (172)
164 3v43_A Histone acetyltransfera 51.2 7.3 0.00025 36.1 2.5 49 193-244 61-111 (112)
165 1f62_A Transcription factor WS 51.2 12 0.00042 29.7 3.5 47 195-244 2-49 (51)
166 2e9q_A 11S globulin subunit be 51.1 5.8 0.0002 45.4 2.1 34 832-865 132-165 (459)
167 2ct0_A Non-SMC element 1 homol 50.9 21 0.00073 31.1 5.2 48 192-245 14-61 (74)
168 4b29_A Dimethylsulfoniopropion 50.8 5 0.00017 41.9 1.4 46 800-851 149-195 (217)
169 1sfn_A Conserved hypothetical 49.6 6.1 0.00021 40.9 1.8 32 821-852 198-229 (246)
170 3t6p_A Baculoviral IAP repeat- 49.2 7.8 0.00027 42.8 2.7 42 192-245 294-335 (345)
171 1sef_A Conserved hypothetical 48.1 6.3 0.00022 41.3 1.7 31 822-852 97-127 (274)
172 2c2l_A CHIP, carboxy terminus 47.4 8.8 0.0003 39.3 2.6 48 191-246 206-253 (281)
173 1rc6_A Hypothetical protein YL 47.2 8.3 0.00029 39.9 2.4 31 822-852 94-124 (261)
174 4e2q_A Ureidoglycine aminohydr 47.2 6 0.00021 42.3 1.4 24 828-851 110-133 (266)
175 3c3v_A Arachin ARAH3 isoform; 46.8 7.8 0.00027 45.0 2.3 34 832-865 131-164 (510)
176 1sq4_A GLXB, glyoxylate-induce 46.6 6 0.0002 41.9 1.2 32 821-852 224-255 (278)
177 1wfl_A Zinc finger protein 216 46.3 15 0.00051 32.6 3.4 35 191-230 23-57 (74)
178 2ysm_A Myeloid/lymphoid or mix 45.9 16 0.00054 33.5 3.8 58 191-254 5-63 (111)
179 1wfk_A Zinc finger, FYVE domai 45.5 9.3 0.00032 34.3 2.1 37 191-228 7-45 (88)
180 1wfh_A Zinc finger (AN1-like) 45.2 15 0.00053 31.7 3.3 36 190-230 12-47 (64)
181 2vje_B MDM4 protein; proto-onc 44.8 8.3 0.00029 31.9 1.6 47 192-244 6-52 (63)
182 1mm2_A MI2-beta; PHD, zinc fin 44.8 8.2 0.00028 32.2 1.5 49 191-244 7-55 (61)
183 1fxz_A Glycinin G1; proglycini 44.5 9.1 0.00031 44.0 2.4 30 829-858 115-144 (476)
184 2d40_A Z3393, putative gentisa 44.4 10 0.00035 41.6 2.6 27 824-850 303-329 (354)
185 3bu7_A Gentisate 1,2-dioxygena 42.7 11 0.00037 42.5 2.6 27 823-849 158-184 (394)
186 3htk_C E3 SUMO-protein ligase 42.5 16 0.00056 39.2 3.8 50 191-246 179-230 (267)
187 1wfp_A Zinc finger (AN1-like) 42.5 26 0.00089 31.1 4.4 36 190-230 22-57 (74)
188 3hcs_A TNF receptor-associated 42.2 8.1 0.00028 37.5 1.3 45 192-244 17-61 (170)
189 2kre_A Ubiquitin conjugation f 41.7 49 0.0017 29.9 6.3 46 191-245 27-72 (100)
190 2arc_A ARAC, arabinose operon 41.2 15 0.00052 33.9 2.9 30 822-851 51-80 (164)
191 3cjx_A Protein of unknown func 40.7 12 0.00043 37.0 2.4 33 832-864 85-126 (165)
192 2ct7_A Ring finger protein 31; 40.5 10 0.00035 33.5 1.6 39 311-349 16-59 (86)
193 2ro1_A Transcription intermedi 40.1 10 0.00035 38.3 1.7 48 193-245 2-49 (189)
194 1wff_A Riken cDNA 2810002D23 p 38.6 19 0.00064 32.7 2.9 36 190-230 22-58 (85)
195 1wev_A Riken cDNA 1110020M19; 37.1 4.1 0.00014 36.5 -1.5 52 192-244 15-71 (88)
196 2y0o_A Probable D-lyxose ketol 36.8 13 0.00045 37.6 1.8 38 826-865 117-155 (175)
197 1uij_A Beta subunit of beta co 36.8 12 0.00041 42.2 1.7 45 801-850 66-114 (416)
198 1vq8_T 50S ribosomal protein L 36.4 9.7 0.00033 36.5 0.8 41 801-843 15-55 (120)
199 3v43_A Histone acetyltransfera 36.3 16 0.00055 33.8 2.3 46 204-254 23-70 (112)
200 3asl_A E3 ubiquitin-protein li 36.3 15 0.00051 31.6 1.9 48 195-244 20-68 (70)
201 1weu_A Inhibitor of growth fam 36.1 39 0.0013 30.8 4.7 48 191-244 34-84 (91)
202 2yrc_A Protein transport prote 36.1 9.2 0.00031 32.3 0.5 16 19-34 8-37 (59)
203 1joc_A EEA1, early endosomal a 36.0 6.4 0.00022 37.5 -0.5 36 192-228 68-105 (125)
204 1fxz_A Glycinin G1; proglycini 35.9 16 0.00055 42.0 2.6 81 799-881 354-438 (476)
205 2puy_A PHD finger protein 21A; 35.5 9.7 0.00033 31.5 0.6 47 192-243 4-50 (60)
206 3shb_A E3 ubiquitin-protein li 35.3 14 0.00048 32.6 1.6 48 195-244 28-76 (77)
207 4a0k_B E3 ubiquitin-protein li 34.7 8.2 0.00028 36.5 0.0 26 212-244 83-108 (117)
208 3j21_U 50S ribosomal protein L 33.6 12 0.00041 35.9 0.9 39 802-842 19-57 (121)
209 2ri7_A Nucleosome-remodeling f 33.1 11 0.00038 36.9 0.6 47 191-244 6-58 (174)
210 3t7l_A Zinc finger FYVE domain 33.1 16 0.00054 32.8 1.6 35 192-227 19-55 (90)
211 2kr4_A Ubiquitin conjugation f 31.3 17 0.00057 31.8 1.4 44 192-244 13-56 (85)
212 2d8v_A Zinc finger FYVE domain 30.6 27 0.00091 30.4 2.5 37 188-227 3-39 (67)
213 3c3v_A Arachin ARAH3 isoform; 30.6 21 0.00073 41.5 2.5 102 760-863 351-453 (510)
214 3ask_A E3 ubiquitin-protein li 30.3 14 0.00047 38.9 0.8 50 193-244 174-224 (226)
215 1z2q_A LM5-1; membrane protein 30.3 22 0.00075 31.4 2.0 35 192-227 20-56 (84)
216 2ea7_A 7S globulin-1; beta bar 30.2 23 0.0008 40.1 2.7 28 826-853 102-130 (434)
217 2cav_A Protein (canavalin); vi 29.9 25 0.00087 40.0 3.0 27 827-853 128-155 (445)
218 3avr_A Lysine-specific demethy 29.1 37 0.0013 39.7 4.2 64 285-351 427-495 (531)
219 1wen_A Inhibitor of growth fam 28.8 27 0.00092 30.2 2.2 47 192-244 15-64 (71)
220 2k16_A Transcription initiatio 28.8 39 0.0013 28.8 3.3 50 192-244 17-67 (75)
221 1j58_A YVRK protein; cupin, de 28.0 27 0.00094 37.9 2.7 25 828-852 123-147 (385)
222 2yw8_A RUN and FYVE domain-con 27.8 24 0.00082 31.0 1.8 36 192-228 18-55 (82)
223 1wep_A PHF8; structural genomi 27.6 1.5E+02 0.0052 25.6 6.9 47 191-244 10-62 (79)
224 1x4u_A Zinc finger, FYVE domai 27.4 24 0.0008 31.1 1.7 36 192-228 13-50 (84)
225 1y02_A CARP2, FYVE-ring finger 27.1 18 0.00062 34.4 1.0 36 192-228 18-55 (120)
226 2o1q_A Putative acetyl/propion 27.0 23 0.00078 33.8 1.6 26 832-857 89-115 (145)
227 2od1_A Protein CBFA2T1; zinc f 26.8 29 0.001 28.7 2.1 32 191-225 11-43 (60)
228 1dvp_A HRS, hepatocyte growth 26.7 18 0.0006 37.0 0.8 35 193-228 161-197 (220)
229 1vfy_A Phosphatidylinositol-3- 26.4 21 0.00073 30.6 1.2 33 194-227 12-46 (73)
230 2o35_A Hypothetical protein DU 26.2 19 0.00064 33.7 0.8 13 217-229 42-54 (105)
231 3zyq_A Hepatocyte growth facto 26.2 18 0.00062 37.3 0.9 35 193-228 164-200 (226)
232 3fyb_A Protein of unknown func 25.9 19 0.00065 33.6 0.8 13 217-229 41-53 (104)
233 2pzo_E CAP-Gly domain-containi 25.6 17 0.00057 29.0 0.3 12 316-327 17-28 (42)
234 1zbd_B Rabphilin-3A; G protein 24.7 36 0.0012 32.9 2.5 73 280-353 17-92 (134)
235 2cs3_A Protein C14ORF4, MY039 24.7 77 0.0026 28.7 4.4 35 191-225 13-48 (93)
236 1v5n_A PDI-like hypothetical p 24.7 27 0.00093 31.3 1.6 31 319-349 47-77 (89)
237 3kgl_A Cruciferin; 11S SEED gl 24.5 30 0.001 39.9 2.2 34 832-865 150-183 (466)
238 2d5f_A Glycinin A3B4 subunit; 23.8 18 0.0006 41.9 0.2 118 760-881 346-464 (493)
239 2hqh_E Restin; beta/BETA struc 23.4 20 0.00067 26.0 0.3 9 318-326 2-10 (26)
240 3qac_A 11S globulin SEED stora 23.4 37 0.0013 39.1 2.7 34 832-865 135-168 (465)
241 1wys_A Riken cDNA 2310008M20 p 23.2 61 0.0021 28.7 3.5 35 190-229 11-47 (75)
242 2dj8_A Protein CBFA2T1; zinc f 22.9 57 0.002 26.8 3.1 32 191-225 13-45 (60)
243 2e6r_A Jumonji/ARID domain-con 22.9 19 0.00067 32.4 0.3 51 191-244 14-65 (92)
244 1wim_A KIAA0161 protein; ring 22.5 19 0.00064 31.6 0.1 51 193-244 5-60 (94)
245 3lqh_A Histone-lysine N-methyl 21.9 66 0.0023 32.6 3.9 47 193-245 2-63 (183)
246 3nw4_A Gentisate 1,2-dioxygena 21.2 45 0.0016 37.2 2.8 30 825-854 315-344 (368)
247 1x4v_A Hypothetical protein LO 20.9 66 0.0022 27.6 3.1 35 191-230 10-46 (63)
248 3vk6_A E3 ubiquitin-protein li 20.2 25 0.00085 32.8 0.4 32 204-244 14-45 (101)
249 3nw0_A Non-structural maintena 20.1 82 0.0028 32.9 4.3 48 192-245 179-226 (238)
No 1
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.1e-129 Score=1067.75 Aligned_cols=353 Identities=27% Similarity=0.467 Sum_probs=272.6
Q ss_pred CchhHHHHHHhhhcCCCEEEeccccCCCCCCCChhhhhhhhhhhcccccccccCceEEEeCCCCCeeecchhhhhccccC
Q 002251 484 RSEGIGNFRKHWVKGEPVIVKQVCDSSSMSIWDPKDIWRGIRETADEKTKDENRIVKAIDCLDWSEVDIELGEFIKGYSE 563 (947)
Q Consensus 484 ~~~~l~hFQ~hW~kGePVIVr~Vl~~~s~lsW~P~~mwra~~e~~~~~~~~~~~~v~aiDCld~~ev~i~i~qFf~Gf~~ 563 (947)
+.+|++|||+||++|||||||||++++++++|+|++||++|++ + .+++|||++|++++|++++||+||++
T Consensus 20 ~~~n~~~Fq~hW~~GePViVs~V~~~~~~~~W~Pe~~~~~~gd---~-------~~~lidC~~~~~~~i~v~~Ff~Gf~~ 89 (392)
T 2ypd_A 20 NSSNWKLFKECWKQGQPAVVSGVHKKMNISLWKAESISLDFGD---H-------QADLLNCKDSIISNANVKEFWDGFEE 89 (392)
T ss_dssp CTTHHHHHHHHHTTTCCEEECCHHHHSCGGGGSHHHHHHHHTT---S-------CCCCEETTTCCBCSCCHHHHHHTSSB
T ss_pred CcccHHHHHHHHhCCCcEEEechhhhCcCCccCHHHHHHHhcC---c-------eeeeeeCCCCccccCcHHHHhhhccc
Confidence 4578999999999999999999999999999999999998753 2 36789999999999999999999999
Q ss_pred Cccc---CCCCceeeeecCCCCchhhHHhhhccchHHHhCCCcccccCCCCccccccccCCCCCCCCCCCCccccccccc
Q 002251 564 GRVR---EDGWPEMLKLKDWPSPSASEEFLLYHKPEFISKLPLLEYIHSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTY 640 (947)
Q Consensus 564 gr~~---~~g~p~mLKLKDWPps~~Fee~lP~h~~eFi~aLP~~EYT~pr~G~LNLAskLP~~~lkPDLGPK~YIAYG~~ 640 (947)
++.+ ++|||+|||||||||+++|+|+||+||+|||++||||||||| +|+||||++||+++++||||||||||||++
T Consensus 90 ~~~r~~~~~g~p~~LKLKDWPp~~~F~e~lP~~~~df~~~LPlpEYt~p-~G~LNLAs~LP~~~~kPDLGPK~YiAYG~~ 168 (392)
T 2ypd_A 90 VSKRQKNKSGETVVLKLKDWPSGEDFKTMMPARYEDLLKSLPLPEYCNP-EGKFNLASHLPGFFVRPDLGPRLCSAYGVV 168 (392)
T ss_dssp GGGC------CCCCEEECSSSBTHHHHHHSHHHHHHHHHHCSSHHHHST-TCTTCCTTTSCGGGCC---CCEEEEECCST
T ss_pred cccCCcCCCCCcceeeecCCCChHHHHHHhHHHHHHHHHcCCchHhhCC-CccchHHHhCCCCCCCCCCCcchhhhcCcc
Confidence 8754 699999999999999999999999999999999999999998 599999999999999999999999999999
Q ss_pred ccccCCCCcceeeeeccccceeeeecccccCCCchhhhhhccchhhcccccCCCCCccCCCCCCCCCCCCCCCCCchhhc
Q 002251 641 EELDRGNSVKNLHFNMPDMVYLLVHMGEVKLPTTEDEKIQSSSRESEVNESVGDPEKVSGEGSFPDLSLGGHDVNNEHVE 720 (947)
Q Consensus 641 eelGrGDSvTkLH~DmSDAVNIL~ht~ev~~~~~q~~~I~k~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ 720 (947)
+++|+|+|||||||||||||||||||++++....... .+.+ +.+++++ .+....+
T Consensus 169 ~~~~~~~gvT~LH~DmsDaVNiL~h~~~~~~~~~~~~-~~~l--------------~~~~~~~----------~d~~~~~ 223 (392)
T 2ypd_A 169 AAKDHDIGTTNLHIEVSDVVNILVYVGIAKGNGILSK-AGIL--------------KKFEEED----------LDDILRK 223 (392)
T ss_dssp TTTCTTCCSEEEEECSSEEEEEEEEEECCBCTTCCCH-HHHH--------------HHHHTSC----------CCHHHHH
T ss_pred hhcccCCCcceeeeehhhhhhhhheecccCccccchh-hhhh--------------hhhhhcc----------ccHHHhh
Confidence 9999999999999999999999999998754432211 0100 0011111 1111111
Q ss_pred ccccchhhhhhhcCccccccccccccccccCCCCCCCCCCCCceeeeeccCCChhHHHHHHHHHHHHhCCCCCCCCCccc
Q 002251 721 KSATDEDEIMEDQGVETGTAEEKTVKSERLNGYSDVSEKTHPGAHWDVFRRQDVPKLIEYLREHWTDFGRPDGVTNDFVT 800 (947)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~GAlWDIFrreDv~KLreyL~kh~~Ef~~~~~~~~~~v~ 800 (947)
+ . ...++.+||+||||||||++|||+||++|++||+.+. ..+.
T Consensus 224 r----------------------------~-----~~~~~~~GAlW~Ifr~~D~~klr~~L~~~~~e~~~~~----~~~~ 266 (392)
T 2ypd_A 224 R----------------------------L-----KDSSEIPGALWHIYAGKDVDKIREFLQKISKEQGLEV----LPEH 266 (392)
T ss_dssp H----------------------------H-----TCTTCCEEEEEEEECGGGHHHHHHHHHHHHHHHC----------C
T ss_pred h----------------------------c-----cCCCCCCCceeeeeCHhhHHHHHHHHHHHHHhhCCCc----cCCC
Confidence 1 1 1345689999999999999999999999999997653 3478
Q ss_pred CCCcCcceecCHHHHHHHHHHhCccceEEEeecCceEEecCCCccccccccccceeeccccCCCCHHHHHHHHHHHhcCC
Q 002251 801 HPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLP 880 (947)
Q Consensus 801 hPIHDQ~fYLd~~hk~rLkEEyGVepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~eC~rLteEfR~Lp 880 (947)
||||||+||||.+||++|+|||||+||||+|++|||||||||||||||||+||||||+||||||||++|++||+|||+||
T Consensus 267 dPihdq~~yL~~~~r~~L~ee~gv~~~~~~Q~~GeavfiPaG~~HQV~Nl~~~i~va~df~spe~~~~c~~lt~E~R~l~ 346 (392)
T 2ypd_A 267 DPIRDQSWYVNKKLRQRLLEEYGVRTCTLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSPEHLVESFHLTQELRLLK 346 (392)
T ss_dssp CHHHHTCCCCCHHHHHHHHHHHCCCCEEEEEETTCEEEECTTCEEEEEESSEEEEEEEEECCGGGHHHHHHHHHHC----
T ss_pred CcCcCCCEEecHHHHHHHHHhcCCeeEEEEEcCCCEEEecCCCHHHHhcccchhhHhhhhcChhhHHHHHHHHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred CchhhhhhhhhhhhhHHHHHHHHHHHHHHh
Q 002251 881 NDHEAKLQVLEVGKISLYAASSAIKEVQKL 910 (947)
Q Consensus 881 ~~H~aK~d~LeVkKm~lya~~~Avke~~~l 910 (947)
+|.+|+||||||+|++||+..||++|++.
T Consensus 347 -~~~~~edkLqvk~m~~~av~~av~~l~~~ 375 (392)
T 2ypd_A 347 -EEINYDDKLQVKNILYHAVKEMVRALKIH 375 (392)
T ss_dssp ------------------------------
T ss_pred -hhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 69999999999999999999999999973
No 2
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=99.19 E-value=1.5e-11 Score=123.88 Aligned_cols=36 Identities=25% Similarity=0.249 Sum_probs=32.5
Q ss_pred CccceEEEeecCceEEecCCCccccccccccceeec
Q 002251 823 GVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGL 858 (947)
Q Consensus 823 GVepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAl 858 (947)
++.++.++|.+||++|||+|..|||+||..||.|..
T Consensus 197 ~~~~~~~~l~pGD~LyiP~gW~H~V~~l~~sisvn~ 232 (235)
T 4gjz_A 197 KAPFLSCILSPGEILFIPVKYWHYVRALDLSFSVSF 232 (235)
T ss_dssp GCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEE
T ss_pred CCCcEEEEECCCCEEEeCCCCcEEEEECCCEEEEEE
Confidence 357899999999999999999999999999887754
No 3
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=99.14 E-value=2.5e-10 Score=125.26 Aligned_cols=53 Identities=25% Similarity=0.336 Sum_probs=50.2
Q ss_pred CccceEEEeecCceEEecCCCccccccccccceeeccccCCCCHHHHHHHHHH
Q 002251 823 GVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEE 875 (947)
Q Consensus 823 GVepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~eC~rLteE 875 (947)
+..++.++|.+||++|||+|-.|||+||..||.|+..|+++.|+...+++|-+
T Consensus 252 ~~~~~~~~l~pGd~l~iP~gw~H~v~~~~~sisv~~~f~~~~nl~~~~~~~~~ 304 (336)
T 3k2o_A 252 EFKPLEILQKPGETVFVPGGWWHVVLNLDTTIAITQNFASSTNFPVVWHKTVR 304 (336)
T ss_dssp GGCCEEEEECTTCEEEECTTCEEEEEESSCEEEEEEEECCTTTHHHHHHHHHH
T ss_pred cCceEEEEECCCCEEEeCCCCcEEEecCCCeEEEEcccCCcccHHHHHHHHHh
Confidence 46789999999999999999999999999999999999999999999999953
No 4
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=99.06 E-value=3.3e-09 Score=120.45 Aligned_cols=83 Identities=14% Similarity=0.112 Sum_probs=65.5
Q ss_pred CccceEEEeecCceEEecCCCccccccccccceeeccccCCCCHHHHHHHHHHHhcCCCchhhhhhhhhhhhhHHHHHHH
Q 002251 823 GVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPNDHEAKLQVLEVGKISLYAASS 902 (947)
Q Consensus 823 GVepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~eC~rLteEfR~Lp~~H~aK~d~LeVkKm~lya~~~ 902 (947)
-.+++.++|..||++|||+|.-|||.||..||-|+..|++.-|+..-+++++==+++... .|-.--....|+||++..
T Consensus 262 ~~~~~~v~l~pGE~LfIPsGWwH~V~nledsIait~NF~~~~nl~~~l~~~~~E~~~~v~--~~~~~p~f~~~~w~~~~~ 339 (451)
T 2yu1_A 262 VSDCQRIELKQGYTFVIPSGWIHAVYTPTDTLVFGGNFLHSFNIPMQLKIYNIEDRTRVP--NKFRYPFYYEMCWYVLER 339 (451)
T ss_dssp SSCCEEEEECTTCEEEECTTCEEEEECSSCEEEEEEEECCSSSHHHHHHHHHHHHHTTCC--TTSSCTTHHHHHHHHHHH
T ss_pred cccceEEEECCCcEEEeCCCceEEEecCCCeEEEeeeeCCcccHHHHHHHHHHHHhhCCC--ccccCccHHHHHHHHHHH
Confidence 457899999999999999999999999999999999999999999999887622222111 244444456899999766
Q ss_pred HHHHH
Q 002251 903 AIKEV 907 (947)
Q Consensus 903 Avke~ 907 (947)
-++.+
T Consensus 340 ~~~~~ 344 (451)
T 2yu1_A 340 YVYCI 344 (451)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66544
No 5
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=99.03 E-value=2.5e-09 Score=122.58 Aligned_cols=87 Identities=18% Similarity=0.263 Sum_probs=73.0
Q ss_pred ccceEEEeecCceEEecCCCccccccccccceeeccccCCCCHHHHHHHHHHHhcCCCchhhhhhhhhhhhhHHHHHHHH
Q 002251 824 VEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPNDHEAKLQVLEVGKISLYAASSA 903 (947)
Q Consensus 824 VepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~eC~rLteEfR~Lp~~H~aK~d~LeVkKm~lya~~~A 903 (947)
.+++.++|..||++|||+|..|||.||..||-|...|++..|+...++..+==+.|.. ..|-+.-.-.+|++|.+..-
T Consensus 333 ~~~~~~~l~pGe~lfIPsGWwH~V~nledsIai~~NF~~~~nl~~~l~~~~~e~~~~~--~~~~~~p~f~~~~w~~~~~~ 410 (488)
T 3kv5_D 333 DKCYKCVVKQGHTLFVPTGWIHAVLTSQDCMAFGGNFLHNLNIGMQLRCYEMEKRLKT--PDLFKFPFFEAICWFVAKNL 410 (488)
T ss_dssp SCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCSTTHHHHHHHHHHHHHTTC--CTTSSCTTHHHHHHHHHHHH
T ss_pred cceEEEeeCCCCEEEeCCCceEEeeCCCCeEEEccccCCccCHHHHHHHHHHHHhcCC--cccccCccHHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999887654343322 34555666678899999998
Q ss_pred HHHHHHhcc
Q 002251 904 IKEVQKLVL 912 (947)
Q Consensus 904 vke~~~l~~ 912 (947)
++.++.+.-
T Consensus 411 l~~~~~~~~ 419 (488)
T 3kv5_D 411 LETLKELRE 419 (488)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHHHh
Confidence 888887764
No 6
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=99.02 E-value=3.8e-09 Score=119.85 Aligned_cols=89 Identities=16% Similarity=0.229 Sum_probs=75.0
Q ss_pred ccceEEEeecCceEEecCCCccccccccccceeeccccCCCCHHHHHHHHHHHhcCCCchhhhhhhhhhhhhHHHHHHHH
Q 002251 824 VEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPNDHEAKLQVLEVGKISLYAASSA 903 (947)
Q Consensus 824 VepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~eC~rLteEfR~Lp~~H~aK~d~LeVkKm~lya~~~A 903 (947)
.+++.++|..||++|||+|..|||.||..||-|+..|++..|+..-++..+==+.+.. ..|-..=.-.+|+||++...
T Consensus 298 ~~~~~v~l~pGetlfIPsGWwH~V~nledsIai~~NF~~~~nl~~~l~~~~~E~~~~~--~~~~~~p~f~~~~w~~~~~~ 375 (447)
T 3kv4_A 298 DKCYKCSVKQGQTLFIPTGWIHAVLTPVDCLAFGGNFLHSLNIEMQLKAYEIEKRLST--ADLFRFPNFETICWYVGKHI 375 (447)
T ss_dssp SCCEEEEEETTCEEEECTTCEEEEEESSCEEEEEEEECCSTTHHHHHHHHHHHHHTTC--CGGGSCTTHHHHHHHHHHHH
T ss_pred cceEEEEECCCcEEecCCCCeEEEecCCCEEEEccccccccCHHHHHHHHHHHHhcCC--CccccccCHHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999998873333322 23445556678999999999
Q ss_pred HHHHHHhccCC
Q 002251 904 IKEVQKLVLDP 914 (947)
Q Consensus 904 vke~~~l~~~p 914 (947)
++.++.+.-+.
T Consensus 376 ~~~~~~~~~~~ 386 (447)
T 3kv4_A 376 LDIFRGLRENR 386 (447)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHhcC
Confidence 99999886543
No 7
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=98.98 E-value=5.5e-09 Score=116.01 Aligned_cols=87 Identities=18% Similarity=0.280 Sum_probs=71.8
Q ss_pred ccceEEEeecCceEEecCCCccccccccccceeeccccCCCCHHHHHHHHH-HHhcCCCchhhhhhhhhhhhhHHHHHHH
Q 002251 824 VEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAE-EIRCLPNDHEAKLQVLEVGKISLYAASS 902 (947)
Q Consensus 824 VepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~eC~rLte-EfR~Lp~~H~aK~d~LeVkKm~lya~~~ 902 (947)
.+++.++|..||++|||+|..|||.||..||-|+..|++..|+...++..+ |-| +.. ..|-.-=.-.+|+||++..
T Consensus 214 ~~~~ev~l~pGEtLfIPsGWwH~V~nledSIai~~NFl~~~nl~~~l~~~~~E~~-~~~--~~~f~fp~F~~~~w~~~~~ 290 (371)
T 3k3o_A 214 DKCYKCSVKQGQTLFIPTGWIHAVLTPVDCLAFGGNFLHSLNIEMQLKAYEIEKR-LST--ADLFRFPNFETICWYVGKH 290 (371)
T ss_dssp SCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCSTTHHHHHHHHHHHHH-HC------CCCTTHHHHHHHHHHH
T ss_pred CceEEEEECCCcEEEeCCCCeEEEecCCCeEEECCcccchhhHHHHHHHHHHHHh-cCC--CcccccccHHHHHHHHHHH
Confidence 689999999999999999999999999999999999999999999999887 433 211 2344444567899999999
Q ss_pred HHHHHHHhccC
Q 002251 903 AIKEVQKLVLD 913 (947)
Q Consensus 903 Avke~~~l~~~ 913 (947)
.++.++.+.-+
T Consensus 291 ~~~~~~~~~~~ 301 (371)
T 3k3o_A 291 ILDIFRGLREN 301 (371)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHhc
Confidence 99999887543
No 8
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=98.95 E-value=1.4e-08 Score=113.75 Aligned_cols=87 Identities=18% Similarity=0.263 Sum_probs=72.7
Q ss_pred ccceEEEeecCceEEecCCCccccccccccceeeccccCCCCHHHHHHHHHHHhcCCCchhhhhhhhhhhhhHHHHHHHH
Q 002251 824 VEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPNDHEAKLQVLEVGKISLYAASSA 903 (947)
Q Consensus 824 VepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~eC~rLteEfR~Lp~~H~aK~d~LeVkKm~lya~~~A 903 (947)
.+++.++|..||++|||+|..|||.||..||-|...|+++.|+...++..+-=+.|.. ..|-+--.-.+|++|++..-
T Consensus 242 ~~~~~v~l~pGe~lfIPsGW~H~V~nledSIai~~NFl~~~nl~~~l~~~~~E~~~k~--~~~~~fp~F~~~~w~~a~~~ 319 (397)
T 3kv9_A 242 DKCYKCVVKQGHTLFVPTGWIHAVLTSQDCMAFGGNFLHNLNIGMQLRCYEMEKRLKT--PDLFKFPFFEAICWFVAKNL 319 (397)
T ss_dssp SCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCSTTHHHHHHHHHHHHHHTC--GGGGGSTTHHHHHHHHHHHH
T ss_pred CceEEEEECCCCEEEeCCCCeEEccCCcCeEEECCcccCchhHHHHHHHHHHHHhcCC--CccCcCccHHHHHHHHHHHH
Confidence 5799999999999999999999999999999999999999999988877553333321 34666667778899999998
Q ss_pred HHHHHHhcc
Q 002251 904 IKEVQKLVL 912 (947)
Q Consensus 904 vke~~~l~~ 912 (947)
++.++++.-
T Consensus 320 l~~~~~~~~ 328 (397)
T 3kv9_A 320 LETLKELRE 328 (397)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 888887764
No 9
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=98.92 E-value=1.4e-08 Score=113.47 Aligned_cols=87 Identities=18% Similarity=0.185 Sum_probs=72.2
Q ss_pred CccceEEEeecCceEEecCCCccccccccccceeeccccCCCCHHHHHHHHH-HHhcCCCchhhhhhhhhhhhhHHHHHH
Q 002251 823 GVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAE-EIRCLPNDHEAKLQVLEVGKISLYAAS 901 (947)
Q Consensus 823 GVepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~eC~rLte-EfR~Lp~~H~aK~d~LeVkKm~lya~~ 901 (947)
..+++.++|..||++|||+|..|||.||..||-|...||+..|+..-++..+ |-| +.. ..|-.-=...+|+||++.
T Consensus 240 ~~~~~ev~l~pGEtlfIPsGWwH~V~nledSIai~gNFl~~~nl~~~l~~~~~E~~-~~~--~~~f~fp~F~~~~wy~~~ 316 (392)
T 3pua_A 240 VDKCYKCIVKQGQTLFIPSGWIYATLTPVDCLAFAGHFLHSLSVEMQMRAYEVERR-LKL--GSLTQFPNFETACWYMGK 316 (392)
T ss_dssp SSCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCTTCHHHHHHHHHHHHH-HTC--CCSSCCTTHHHHHHHHHH
T ss_pred ccceEEEEECCCcEEeeCCCceEEEecCCCEEEEcCcccChhhHHHHHHHHHHHHH-hCC--CccCcCCChHHHHHHHHH
Confidence 3679999999999999999999999999999999999999999999999887 544 221 123444456788999999
Q ss_pred HHHHHHHHhcc
Q 002251 902 SAIKEVQKLVL 912 (947)
Q Consensus 902 ~Avke~~~l~~ 912 (947)
..+++++.+.-
T Consensus 317 ~~l~~~~~~~~ 327 (392)
T 3pua_A 317 HLLEAFKGSHK 327 (392)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhh
Confidence 99998887643
No 10
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=98.84 E-value=6.7e-09 Score=113.39 Aligned_cols=42 Identities=19% Similarity=0.201 Sum_probs=39.4
Q ss_pred ccceEEEeecCceEEecCCCccccccccccceeeccccCCCC
Q 002251 824 VEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPES 865 (947)
Q Consensus 824 VepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEn 865 (947)
+.++.+++.+||++|||+|..|||+||..||.|..-|.++..
T Consensus 237 ~~~~~~~L~pGD~LyiP~gWwH~v~~l~~sisvn~~~~~~~~ 278 (338)
T 3al5_A 237 ARRYECSLEAGDVLFIPALWFHNVISEEFGVGVNIFWKHLPS 278 (338)
T ss_dssp CCEEEEEECTTCEEEECTTCEEEEEESSCEEEEEEEECSSCG
T ss_pred CCCEEEEECCCCEEEECCCCeEEEeeCCCEEEEEEEecCCcc
Confidence 579999999999999999999999999999999999988764
No 11
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=98.72 E-value=4.5e-09 Score=115.41 Aligned_cols=40 Identities=15% Similarity=0.334 Sum_probs=36.4
Q ss_pred CccceEEEeecCceEEecCCCcccccccc-ccceeeccccC
Q 002251 823 GVEPWSFEQHLGEAVFIPAGCPFQVRNLQ-STVQLGLDFLF 862 (947)
Q Consensus 823 GVepWtf~Q~lGEAVFIPAGCPHQVRNLk-SCIKVAlDFVS 862 (947)
.+.++.+++.+||++|||+|..|||+||. .++.|++.|..
T Consensus 257 ~~~~~~~~l~pGD~LyiP~gWwH~V~~l~d~~~sisvn~w~ 297 (349)
T 3d8c_A 257 NVVGYETVVGPGDVLYIPMYWWHHIESLLNGGITITVNFWY 297 (349)
T ss_dssp GCCEEEEEECTTCEEEECTTCEEEEEECTTSCCEEEEEEEE
T ss_pred cCCcEEEEECCCCEEEECCCCcEEEEEcCCCCcEEEEEEEc
Confidence 35799999999999999999999999998 58999999875
No 12
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=98.18 E-value=1.1e-05 Score=93.01 Aligned_cols=51 Identities=20% Similarity=0.231 Sum_probs=46.9
Q ss_pred ccceEEEeecCceEEecCCCccccccccccceeeccccCCCCHHHHHHHHH
Q 002251 824 VEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAE 874 (947)
Q Consensus 824 VepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~eC~rLte 874 (947)
.....++|..||++|||+|..|+|.|+..||-|.-.||+..||..-+++++
T Consensus 363 ~~~~~v~l~pGEtlfIPsGW~HaV~tleDSIaiggNFl~~~nl~~qlri~~ 413 (528)
T 3pur_A 363 GAVKRVVIKEGQTLLIPAGWIHAVLTPVDSLVFGGNFLHLGNLEMQMRVYH 413 (528)
T ss_dssp TCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCGGGHHHHHHHHH
T ss_pred ccEEEEEECCCCEEEecCCceEEEecCCCeEEEcCcccchhhHHHHHHHHH
Confidence 345589999999999999999999999999999999999999999988664
No 13
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=97.49 E-value=0.00015 Score=79.70 Aligned_cols=84 Identities=14% Similarity=0.130 Sum_probs=70.4
Q ss_pred eeeeeccCCChhHHHHHHHHHHHHhCCCCCCCCCcccCCCcCcceecCHHHHHHHHHHhCccceEEEeecCceEEecCCC
Q 002251 764 AHWDVFRRQDVPKLIEYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGC 843 (947)
Q Consensus 764 AlWDIFrreDv~KLreyL~kh~~Ef~~~~~~~~~~v~hPIHDQ~fYLd~~hk~rLkEEyGVepWtf~Q~lGEAVFIPAGC 843 (947)
-+|=.-..+.+.+++++++++. .| +|.+.++++.+. |+ +.||--+.|+|++||.|+|++||
T Consensus 235 ~~Wy~VP~e~~~~~e~l~~k~~--------------~d-~~~~~~~~~p~~---L~-~~gIPvyr~~QkpGd~Vi~~Pga 295 (332)
T 2xxz_A 235 CEWFAVHEHYWETISAFCDRHG--------------VD-YLTGSWWPILDD---LY-ASNIPVYRFVQRPGDLVWINAGT 295 (332)
T ss_dssp EEEEEECGGGHHHHHHHHHHTT--------------CC-TTTSCBCCCHHH---HH-HTTCCCEEEEECTTCEEEECTTC
T ss_pred eEEEEECHHHHHHHHHHHHhcC--------------Cc-hhhceecCCHHH---HH-hCCCCeEEEEECCCCEEEECCCc
Confidence 3999999999999999998632 12 234567777654 33 45999999999999999999999
Q ss_pred ccccccccccceeeccccCCCCH
Q 002251 844 PFQVRNLQSTVQLGLDFLFPESV 866 (947)
Q Consensus 844 PHQVRNLkSCIKVAlDFVSPEnV 866 (947)
-|||.|.--|+++|..|..|...
T Consensus 296 yH~v~n~G~~~n~awN~a~~~~~ 318 (332)
T 2xxz_A 296 VHWVQATGWCNNIAWNVGPLTAY 318 (332)
T ss_dssp EEEEEESSSEEEEEEEEESCTTG
T ss_pred eEEEEecceeeEEEEEeCCCcHH
Confidence 99999999999999999999765
No 14
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=97.45 E-value=0.00023 Score=82.43 Aligned_cols=87 Identities=17% Similarity=0.123 Sum_probs=73.0
Q ss_pred eeeeeccCCChhHHHHHHHHHHHHhCCCCCCCCCcccCCCcCcceecCHHHHHHHHHHhCccceEEEeecCceEEecCCC
Q 002251 764 AHWDVFRRQDVPKLIEYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGC 843 (947)
Q Consensus 764 AlWDIFrreDv~KLreyL~kh~~Ef~~~~~~~~~~v~hPIHDQ~fYLd~~hk~rLkEEyGVepWtf~Q~lGEAVFIPAGC 843 (947)
.+|=.-..++..|++++++++. .|. |...|+++.+. |+ +.||--+.|+|++||.|++++||
T Consensus 294 ~~Wy~VP~e~~~k~e~l~~k~~--------------~~~-~~~~~~~~p~~---L~-~~gIPvyr~vQkpGd~Vi~~Pga 354 (531)
T 3avr_A 294 CEWFVVPEGYWGVLNDFCEKNN--------------LNF-LMGSWWPNLED---LY-EANVPVYRFIQRPGDLVWINAGT 354 (531)
T ss_dssp EEEEEECGGGHHHHHHHHHHTT--------------CCT-TTSCBCCCHHH---HH-HTTCCCEEEEECTTCEEEECTTC
T ss_pred eEEEEeCHHHHHHHHHHHHHcC--------------CCh-hhceeecCHHH---HH-hCCCCeEEEEECCCCEEEECCCc
Confidence 4899999999999999998641 122 34567887654 33 45999999999999999999999
Q ss_pred ccccccccccceeeccccCCCCHHHH
Q 002251 844 PFQVRNLQSTVQLGLDFLFPESVGEA 869 (947)
Q Consensus 844 PHQVRNLkSCIKVAlDFVSPEnV~eC 869 (947)
.|||.|+--|+++|..|..|.-+.--
T Consensus 355 yH~v~n~G~~~n~awN~a~~~~~q~~ 380 (531)
T 3avr_A 355 VHWVQAIGWCNNIAWNVGPLTACQYK 380 (531)
T ss_dssp EEEEEESSSEEEEEEEECCSSHHHHH
T ss_pred eEEEEecceeeeeEEEeccCchHHHH
Confidence 99999999999999999999976643
No 15
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=97.04 E-value=0.00072 Score=77.68 Aligned_cols=85 Identities=13% Similarity=0.098 Sum_probs=70.5
Q ss_pred eeeeeccCCChhHHHHHHHHHHHHhCCCCCCCCCcccCCCcCcceecCHHHHHHHHHHhCccceEEEeecCceEEecCCC
Q 002251 764 AHWDVFRRQDVPKLIEYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGC 843 (947)
Q Consensus 764 AlWDIFrreDv~KLreyL~kh~~Ef~~~~~~~~~~v~hPIHDQ~fYLd~~hk~rLkEEyGVepWtf~Q~lGEAVFIPAGC 843 (947)
-+|=.-..+...+++++++++. .+ ++.+.|+.+.+. ..+.||.-+.|+|++||.|++++|+
T Consensus 269 c~WY~VP~e~~~k~e~l~~k~~--------------~d-~l~~~~~pspe~----L~kagIPvyr~iQkPGdfVit~Pgt 329 (510)
T 4ask_A 269 CEWFAVHEHYWETISAFCDRHG--------------VD-YLTGSWWPILDD----LYASNIPVYRFVQRPGDLVWINAGT 329 (510)
T ss_dssp EEEEEECGGGHHHHHHHHHHTT--------------CC-TTTSCBCCCHHH----HHHTTCCCEEEEECTTCEEEECTTC
T ss_pred eeEEEECHHHHHHHHHHHHHhC--------------cc-hhhccccCCHHH----HHhCCCCeEEEEECCCCEEEECCCc
Confidence 3999999999999999998642 12 234667777663 3457999999999999999999999
Q ss_pred ccccccccccceeeccccCCCCHH
Q 002251 844 PFQVRNLQSTVQLGLDFLFPESVG 867 (947)
Q Consensus 844 PHQVRNLkSCIKVAlDFVSPEnV~ 867 (947)
.|+|+|.-=|++||..|.-|-...
T Consensus 330 yH~Vqs~Gf~~niaWNvap~t~~q 353 (510)
T 4ask_A 330 VHWVQATGWCNNIAWNVGPLTAYQ 353 (510)
T ss_dssp EEEEEESSSEEEEEEEECBSSHHH
T ss_pred eEEEEecCeeeeeEEEecCCCHHH
Confidence 999999999999999998886543
No 16
>3dxt_A JMJC domain-containing histone demethylation PROT; JMJD2D, histone demethylase, H3K9, jumonji domain-CONT protein 2D, oxidoreductase; 1.80A {Homo sapiens} PDB: 3dxu_A* 4hon_A* 4hoo_A 2w2i_A*
Probab=95.98 E-value=0.0065 Score=67.39 Aligned_cols=92 Identities=18% Similarity=0.101 Sum_probs=76.6
Q ss_pred eeeeccCCChhHHHHHHHHHHHH-hCCCCCCCCCcccCCCcCcceecCHHHHHHHHHHhCccceEEEeecCceEEecCCC
Q 002251 765 HWDVFRRQDVPKLIEYLREHWTD-FGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGC 843 (947)
Q Consensus 765 lWDIFrreDv~KLreyL~kh~~E-f~~~~~~~~~~v~hPIHDQ~fYLd~~hk~rLkEEyGVepWtf~Q~lGEAVFIPAGC 843 (947)
+|=.-..++..|+++++++..-+ |+. ++ +=+|.+.+.+++.. |+ +.||.-.+++|++||.|++-.|+
T Consensus 211 ~WY~VP~~~~~kfE~l~k~~~p~~~~~--c~------~fL~h~~~lisP~~---L~-~~GIpv~~~vQ~pGEfViTfP~a 278 (354)
T 3dxt_A 211 TWYVVPPEHGQRLERLARELFPGSSRG--CG------AFLRHKVALISPTV---LK-ENGIPFNRITQEAGEFMVTFPYG 278 (354)
T ss_dssp EEEEECGGGHHHHHHHHHHHSHHHHHH--CT------TGGGGCCEEECHHH---HH-HTTCCCEEEEECTTCEEEECTTC
T ss_pred EEEEeCHHHHHHHHHHHHHhCchhhhh--cH------HHHhcCcccCCHHH---HH-HCCCceEEEEeCCCcEEEECCCc
Confidence 99999999999999999987532 221 11 12456788889873 44 47999999999999999999999
Q ss_pred ccccccccccceeeccccCCCCHHH
Q 002251 844 PFQVRNLQSTVQLGLDFLFPESVGE 868 (947)
Q Consensus 844 PHQVRNLkSCIKVAlDFVSPEnV~e 868 (947)
=|.|.|+--++..|+.|..|.=+..
T Consensus 279 YH~gfn~Gfn~aEAvNFA~~~Wl~~ 303 (354)
T 3dxt_A 279 YHAGFNHGFNCAEAINFATPRWIDY 303 (354)
T ss_dssp EEEEEESSSEEEEEEEECCGGGHHH
T ss_pred eEEEeeccccHhHhhccCcHHHHHh
Confidence 9999999999999999999998763
No 17
>3opt_A DNA damage-responsive transcriptional repressor R; RPH1, histone demethylase, catalytic core, oxidoreductase; HET: DNA AKG; 2.20A {Saccharomyces cerevisiae} PDB: 3opw_A*
Probab=95.43 E-value=0.021 Score=63.71 Aligned_cols=91 Identities=15% Similarity=0.182 Sum_probs=73.1
Q ss_pred eeeeccCCChhHHHHHHHHHHH-HhCCCCCCCCCcccCCCcCcceecCHHHHHHHHHHhCccceEEEeecCceEEecCCC
Q 002251 765 HWDVFRRQDVPKLIEYLREHWT-DFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGC 843 (947)
Q Consensus 765 lWDIFrreDv~KLreyL~kh~~-Ef~~~~~~~~~~v~hPIHDQ~fYLd~~hk~rLkEEyGVepWtf~Q~lGEAVFIPAGC 843 (947)
+|=.-..+++.|+++++++++- +|.. ++ + =+|...+.+++.. |+ +.||.-.+++|++||.|++=.|+
T Consensus 254 ~WY~VP~~~~~kfE~l~k~~~p~~~~~--c~--~----fL~h~~~lisP~~---L~-~~GIpv~r~vQ~pGEfViTfP~a 321 (373)
T 3opt_A 254 QWYSIPQEDRFKFYKFMQEQFPEEAKN--CP--E----FLRHKMFLASPKL---LQ-ENGIRCNEIVHHEGEFMITYPYG 321 (373)
T ss_dssp EEEECCGGGHHHHHHHHHHSSHHHHSS--CS--S----CTTTSCEEECHHH---HH-TTTCCCEEEEECTTCEEEECTTC
T ss_pred EEEEeCHHHHHHHHHHHHHhChhhhhh--CH--H----HhhCCcccCCHHH---HH-hcCCceEEEEECCCCEEEECCCc
Confidence 9999999999999999998753 4432 11 1 2345678888863 44 57999999999999999999999
Q ss_pred ccccccccccceeeccccCCCCHH
Q 002251 844 PFQVRNLQSTVQLGLDFLFPESVG 867 (947)
Q Consensus 844 PHQVRNLkSCIKVAlDFVSPEnV~ 867 (947)
=|.|.|+--++..|+.|..|+=+.
T Consensus 322 YH~gfn~Gfn~aEAvNFA~~~Wl~ 345 (373)
T 3opt_A 322 YHAGFNYGYNLAESVNFALEEWLP 345 (373)
T ss_dssp CEEEEESSSEEEEEEEECCC----
T ss_pred eEEEEecCccHHHHHccCcHHHHH
Confidence 999999999999999999987654
No 18
>2ox0_A JMJC domain-containing histone demethylation PROT; double-stranded beta helix, demethylase, oxygenase, SGC, STR genomics, structural genomics consortium, oxidoreductase; HET: MLY ALY OGA; 1.95A {Homo sapiens} PDB: 2oq7_A* 2os2_A* 2ot7_A* 2oq6_A* 2vd7_A* 2ybk_A* 2ybp_A* 2ybs_A* 3njy_A* 3pdq_A* 3u4s_A* 2p5b_A* 2q8c_A* 2q8d_A* 2q8e_A* 2gp5_A* 2gp3_A* 2wwj_A* 2pxj_A* 2xml_A*
Probab=94.54 E-value=0.036 Score=62.06 Aligned_cols=92 Identities=12% Similarity=0.034 Sum_probs=76.1
Q ss_pred eeeeccCCChhHHHHHHHHHHH-HhCCCCCCCCCcccCCCcCcceecCHHHHHHHHHHhCccceEEEeecCceEEecCCC
Q 002251 765 HWDVFRRQDVPKLIEYLREHWT-DFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGC 843 (947)
Q Consensus 765 lWDIFrreDv~KLreyL~kh~~-Ef~~~~~~~~~~v~hPIHDQ~fYLd~~hk~rLkEEyGVepWtf~Q~lGEAVFIPAGC 843 (947)
+|=+-..+++.|++++++++.- .|.. + .+=+|...+.++.+. |+ +.||.-.+++|++||.|++=.|+
T Consensus 229 ~WY~VP~~~~~kfE~l~~~~~P~~~~~--~------~~~L~h~~~~isP~~---L~-~~GIpv~r~vQ~pGEfViTfP~a 296 (381)
T 2ox0_A 229 SWYSVPPEHGKRLERLAKGFFPGSAQS--C------EAFLRHKMTLISPLM---LK-KYGIPFDKVTQEAGEFMITFPYG 296 (381)
T ss_dssp EEEEECGGGHHHHHHHHHHHSHHHHHH--C------TTGGGGSCEEECHHH---HH-HTTCCCEEEEECTTCEEEECTTC
T ss_pred EEEecCHHHHHHHHHHHHHhChhhhhc--c------hHHhhccccccCHHH---HH-HCCCceEEEEecCCCEEEECCCc
Confidence 9999999999999999998753 3322 1 122456788888864 33 57999999999999999999999
Q ss_pred ccccccccccceeeccccCCCCHHH
Q 002251 844 PFQVRNLQSTVQLGLDFLFPESVGE 868 (947)
Q Consensus 844 PHQVRNLkSCIKVAlDFVSPEnV~e 868 (947)
=|.|.|+--++..|+.|..|+=+..
T Consensus 297 YH~gfn~GfN~aEAvNFA~~~Wl~~ 321 (381)
T 2ox0_A 297 YHAGFNHGFNCAESTNFATRRWIEY 321 (381)
T ss_dssp EEEEEECSSEEEEEEEECCTTHHHH
T ss_pred EEEeecCcccHHHHhccCcHHHHHH
Confidence 9999999999999999998876643
No 19
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=93.12 E-value=0.11 Score=56.89 Aligned_cols=57 Identities=12% Similarity=0.188 Sum_probs=42.4
Q ss_pred ccceEEEeecCceEEecCCCccccccc--cccceeeccccCCCCHHHHHHH--------HHHHhcCCCch
Q 002251 824 VEPWSFEQHLGEAVFIPAGCPFQVRNL--QSTVQLGLDFLFPESVGEAVRL--------AEEIRCLPNDH 883 (947)
Q Consensus 824 VepWtf~Q~lGEAVFIPAGCPHQVRNL--kSCIKVAlDFVSPEnV~eC~rL--------teEfR~Lp~~H 883 (947)
..++.++-.+||+.|||+|.+|+|+++ ..||.|.+- +| +..+-+.- ..+||.||.+.
T Consensus 215 ~~~~~~~L~pGD~LyiP~gwwH~v~s~~~~~slsvsi~--~~-~~~dll~~~l~~~~~~~~~~r~lp~~~ 281 (342)
T 1vrb_A 215 PDAEIVNLTPGTMLYLPRGLWHSTKSDQATLALNITFG--QP-AWLDLMLAALRKKLISDNRFRELAVNH 281 (342)
T ss_dssp CSSEEEEECTTCEEEECTTCEEEEECSSCEEEEEEEEC--CC-BHHHHHHHHHHHHHTTSGGGGSBCCCT
T ss_pred CCceEEEECCCcEEEeCCCccEEEEECCCCceEEEEEC--CC-cHHHHHHHHHHHHHHhCHHhhhCCCcc
Confidence 567999999999999999999999999 468888877 45 33333221 23677777543
No 20
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.95 E-value=0.27 Score=41.33 Aligned_cols=46 Identities=22% Similarity=0.374 Sum_probs=34.0
Q ss_pred cCCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002251 191 TGGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (947)
Q Consensus 191 ~~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (947)
.....|--|...-...++. .|+ ..||..||..|.... ..||.||..
T Consensus 13 ~~~~~C~IC~~~~~~~~~~--~Cg-H~fC~~Ci~~~~~~~------~~CP~Cr~~ 58 (71)
T 2d8t_A 13 LTVPECAICLQTCVHPVSL--PCK-HVFCYLCVKGASWLG------KRCALCRQE 58 (71)
T ss_dssp SSCCBCSSSSSBCSSEEEE--TTT-EEEEHHHHHHCTTCS------SBCSSSCCB
T ss_pred CCCCCCccCCcccCCCEEc--cCC-CHHHHHHHHHHHHCC------CcCcCcCch
Confidence 4667899998665543332 588 579999999998642 689999874
No 21
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=90.68 E-value=0.12 Score=46.08 Aligned_cols=58 Identities=19% Similarity=0.354 Sum_probs=39.0
Q ss_pred cCCCcCcceecCHHHHHHHHHHhCccceEEEeecCceEEecCCCccccccccccceeeccccCCC
Q 002251 800 THPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPE 864 (947)
Q Consensus 800 ~hPIHDQ~fYLd~~hk~rLkEEyGVepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 864 (947)
.|+ +++-+|+.... -++.+..=++.=..||+++||+|.||+++|...|.-+.+ ++.||
T Consensus 57 ~H~-~~e~~~vl~G~-----~~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~v-~~~~~ 114 (115)
T 1yhf_A 57 SSP-GDAMVTILSGL-----AEITIDQETYRVAEGQTIVMPAGIPHALYAVEAFQMLLV-VVKPE 114 (115)
T ss_dssp CCS-SEEEEEEEESE-----EEEEETTEEEEEETTCEEEECTTSCEEEEESSCEEEEEE-EECSC
T ss_pred ECC-CcEEEEEEeCE-----EEEEECCEEEEECCCCEEEECCCCCEEEEECCCceEEEE-EEccC
Confidence 355 46667765542 123345556777899999999999999999886544333 44444
No 22
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=90.65 E-value=0.08 Score=48.48 Aligned_cols=24 Identities=21% Similarity=0.314 Sum_probs=20.6
Q ss_pred EEeecCceEEecCCCccccccccc
Q 002251 829 FEQHLGEAVFIPAGCPFQVRNLQS 852 (947)
Q Consensus 829 f~Q~lGEAVFIPAGCPHQVRNLkS 852 (947)
+.=..||.|+||||.||+++|.-.
T Consensus 75 ~~l~~Gd~i~ipa~~~H~~~n~~~ 98 (112)
T 2opk_A 75 RVMRPGDWLHVPAHCRHRVAWTDG 98 (112)
T ss_dssp EEECTTEEEEECTTCCEEEEEECS
T ss_pred EEECCCCEEEECCCCcEEEEeCCC
Confidence 444679999999999999999864
No 23
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=90.28 E-value=0.1 Score=46.75 Aligned_cols=57 Identities=16% Similarity=0.197 Sum_probs=38.7
Q ss_pred cCCCcCcceecCHHHHHHHHHHhCccceEEEeecCceEEecCCCccccccccccceeeccccCCC
Q 002251 800 THPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPE 864 (947)
Q Consensus 800 ~hPIHDQ~fYLd~~hk~rLkEEyGVepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 864 (947)
.|| ++|-+|+-.-. -++-|..=++.=..||+++||+|.||+++|...|. .+.+.+|.
T Consensus 51 ~H~-~~e~~~vl~G~-----~~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~--~l~v~~p~ 107 (116)
T 2pfw_A 51 AHR-HSQVSYVVEGE-----FHVNVDGVIKVLTAGDSFFVPPHVDHGAVCPTGGI--LIDTFSPA 107 (116)
T ss_dssp CCS-SEEEEEEEEEC-----EEEEETTEEEEECTTCEEEECTTCCEEEEESSCEE--EEEEEESC
T ss_pred ECC-cceEEEEEeeE-----EEEEECCEEEEeCCCCEEEECcCCceeeEeCCCcE--EEEEECCc
Confidence 456 56666665442 12334444677789999999999999999998763 34444553
No 24
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=90.05 E-value=0.17 Score=46.82 Aligned_cols=41 Identities=27% Similarity=0.138 Sum_probs=31.4
Q ss_pred ccceEEEeecCceEEecCCCccccccccccceeeccccCCC
Q 002251 824 VEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPE 864 (947)
Q Consensus 824 VepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 864 (947)
|..=++.=..||+|+||+|.||+++|...---+.+-+++|.
T Consensus 76 ~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~l~i~~~~ 116 (145)
T 3ht1_A 76 DQGRTEEVGPGEAIFIPRGEPHGFVTGPGQTCRFLVVAPCE 116 (145)
T ss_dssp GGTEEEEECTTCEEEECTTCCBEEECCTTCCEEEEEEEESC
T ss_pred ECCEEEEECCCCEEEECCCCeEEeEcCCCCCEEEEEEECCC
Confidence 44556777889999999999999999876544555555555
No 25
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=89.97 E-value=0.13 Score=47.09 Aligned_cols=54 Identities=19% Similarity=0.293 Sum_probs=36.7
Q ss_pred CcceecCHHHHHHHHHHhCccceEEEeecCceEEecCCCccccccccccceeeccccCCC
Q 002251 805 GEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPE 864 (947)
Q Consensus 805 DQ~fYLd~~hk~rLkEEyGVepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 864 (947)
++.+|+-.-. -++-|..=++.=..||+|+||+|.||+++|...+. +.+-+|.|.
T Consensus 57 ~e~~~Vl~G~-----~~~~i~~~~~~l~~Gd~i~ip~~~~H~~~~~~~~~-~~~~~v~p~ 110 (114)
T 3fjs_A 57 PSTIQCLEGE-----VEIGVDGAQRRLHQGDLLYLGAGAAHDVNAITNTS-LLVTVVLVD 110 (114)
T ss_dssp CEEEEEEESC-----EEEEETTEEEEECTTEEEEECTTCCEEEEESSSEE-EEEEEECC-
T ss_pred cEEEEEEECE-----EEEEECCEEEEECCCCEEEECCCCcEEEEeCCCcE-EEEEEEeCC
Confidence 4555554432 13445556778889999999999999999997653 334555554
No 26
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=89.84 E-value=0.5 Score=44.89 Aligned_cols=43 Identities=30% Similarity=0.813 Sum_probs=31.7
Q ss_pred CCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002251 194 QICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (947)
Q Consensus 194 ~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (947)
.+|-=|...-...++ ..|+ ..||..||..|... ...||.||..
T Consensus 54 ~~C~iC~~~~~~~~~--~~Cg-H~fc~~Ci~~~~~~------~~~CP~Cr~~ 96 (138)
T 4ayc_A 54 LQCIICSEYFIEAVT--LNCA-HSFCSYCINEWMKR------KIECPICRKD 96 (138)
T ss_dssp SBCTTTCSBCSSEEE--ETTS-CEEEHHHHHHHTTT------CSBCTTTCCB
T ss_pred CCCcccCcccCCceE--CCCC-CCccHHHHHHHHHc------CCcCCCCCCc
Confidence 468888766554433 3688 48999999999864 2479999874
No 27
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=89.63 E-value=0.11 Score=45.71 Aligned_cols=39 Identities=18% Similarity=0.175 Sum_probs=29.5
Q ss_pred Ccc-ceEEEeecCceEEecCCCccccccccccceeeccccCC
Q 002251 823 GVE-PWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFP 863 (947)
Q Consensus 823 GVe-pWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSP 863 (947)
.+. .=++.=..||+++||+|.||+++|...+. .+..++|
T Consensus 69 ~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~--~l~~~~p 108 (110)
T 2q30_A 69 VGDGDAVIPAPRGAVLVAPISTPHGVRAVTDMK--VLVTIAP 108 (110)
T ss_dssp ECGGGCEEEECTTEEEEEETTSCEEEEESSSEE--EEEEEES
T ss_pred EeCCCEEEEECCCCEEEeCCCCcEEEEEcCCcE--EEEEECC
Confidence 344 45677789999999999999999998753 3444554
No 28
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.44 E-value=0.21 Score=42.87 Aligned_cols=48 Identities=25% Similarity=0.554 Sum_probs=35.9
Q ss_pred cCCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCCccc
Q 002251 191 TGGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGSCN 247 (947)
Q Consensus 191 ~~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg~CN 247 (947)
.....|--|...-...++ ..|+ ..||..||..|+.. ...||.||..-+
T Consensus 13 ~~~~~C~IC~~~~~~p~~--~~Cg-H~fC~~Ci~~~~~~------~~~CP~Cr~~~~ 60 (81)
T 2csy_A 13 EIPFRCFICRQAFQNPVV--TKCR-HYFCESCALEHFRA------TPRCYICDQPTG 60 (81)
T ss_dssp CCCSBCSSSCSBCCSEEE--CTTS-CEEEHHHHHHHHHH------CSBCSSSCCBCC
T ss_pred CCCCCCcCCCchhcCeeE--ccCC-CHhHHHHHHHHHHC------CCcCCCcCcccc
Confidence 356789999776555443 5798 58999999999842 458999998554
No 29
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=89.34 E-value=0.12 Score=46.58 Aligned_cols=24 Identities=25% Similarity=0.268 Sum_probs=20.8
Q ss_pred EEeecCceEEecCCCccccccccc
Q 002251 829 FEQHLGEAVFIPAGCPFQVRNLQS 852 (947)
Q Consensus 829 f~Q~lGEAVFIPAGCPHQVRNLkS 852 (947)
+.-..||++|||+|.+|++.|.-+
T Consensus 61 ~~l~~G~~~~ip~G~~H~~~N~g~ 84 (98)
T 3lag_A 61 AQLKTGRSYARKAGVQHDVRNEST 84 (98)
T ss_dssp CCBCTTCCEEECTTCEEEEBCCSS
T ss_pred EEecCCcEEEEcCCCcEECEECCC
Confidence 445789999999999999999864
No 30
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=89.34 E-value=0.18 Score=45.91 Aligned_cols=38 Identities=11% Similarity=0.033 Sum_probs=29.2
Q ss_pred ceEEEeecCceEEecCCCccccccccccceeeccccCC
Q 002251 826 PWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFP 863 (947)
Q Consensus 826 pWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSP 863 (947)
.=++.=..||+|+||+|.||+++|..+---+.+.+++|
T Consensus 78 ~~~~~l~~Gd~~~i~~~~~H~~~n~~~~~~~~l~v~~p 115 (125)
T 3h8u_A 78 GIVTHLKAGDIAIAKPGQVHGAMNSGPEPFIFVSVVAP 115 (125)
T ss_dssp TCEEEEETTEEEEECTTCCCEEEECSSSCEEEEEEEES
T ss_pred CeEEEeCCCCEEEECCCCEEEeEeCCCCCEEEEEEECC
Confidence 33555678999999999999999987654455555665
No 31
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=89.19 E-value=0.18 Score=43.39 Aligned_cols=38 Identities=34% Similarity=0.328 Sum_probs=27.0
Q ss_pred ceEEEeecCceEEecCCCccccccccccceeeccccCC
Q 002251 826 PWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFP 863 (947)
Q Consensus 826 pWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSP 863 (947)
.=++.=..||+++||+|.||+++|...---+.+-+++|
T Consensus 66 ~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~~~v~~p 103 (105)
T 1v70_A 66 EEEALLAPGMAAFAPAGAPHGVRNESASPALLLVVTAP 103 (105)
T ss_dssp TEEEEECTTCEEEECTTSCEEEECCSSSCEEEEEEEES
T ss_pred CEEEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEeCC
Confidence 34566679999999999999999986432233444444
No 32
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=88.94 E-value=0.23 Score=45.16 Aligned_cols=58 Identities=22% Similarity=0.245 Sum_probs=40.2
Q ss_pred cCCCcCcceecCHHHHHHHHHHhCccceEEEeecCceEEecCCCccccccccccceeeccccCCC
Q 002251 800 THPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPE 864 (947)
Q Consensus 800 ~hPIHDQ~fYLd~~hk~rLkEEyGVepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 864 (947)
.|| ++|-+|+-.-. -++-|..-++.=..||+|+||+|.||.++|... --+.+.+++|-
T Consensus 58 ~H~-~~e~~~vl~G~-----~~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~-~~~~l~v~~p~ 115 (126)
T 4e2g_A 58 EHP-HEQAGVMLEGT-----LELTIGEETRVLRPGMAYTIPGGVRHRARTFED-GCLVLDIFSPP 115 (126)
T ss_dssp CCS-SEEEEEEEEEC-----EEEEETTEEEEECTTEEEEECTTCCEEEECCTT-CEEEEEEEESC
T ss_pred cCC-CceEEEEEEeE-----EEEEECCEEEEeCCCCEEEECCCCcEEeEECCC-CEEEEEEECCC
Confidence 455 46666665442 123444556777899999999999999999988 33455666664
No 33
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=88.46 E-value=0.37 Score=40.91 Aligned_cols=52 Identities=25% Similarity=0.578 Sum_probs=36.7
Q ss_pred CCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCCcc
Q 002251 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGSC 246 (947)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg~C 246 (947)
....|.-|...-...++ ..|+ ..||..||..|+...........||.||...
T Consensus 18 ~~~~C~IC~~~~~~p~~--~~Cg-H~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~ 69 (85)
T 2ecw_A 18 EEVTCPICLELLKEPVS--ADCN-HSFCRACITLNYESNRNTDGKGNCPVCRVPY 69 (85)
T ss_dssp TTTSCTTTCSCCSSCEE--CTTS-CCBCHHHHHHHHHHSBCTTSCBCCTTTCCCC
T ss_pred cCCCCcCCChhhCccee--CCCC-CHHHHHHHHHHHHhccCCCCCCCCCCCCCcC
Confidence 56789999877555443 3588 4899999999976422123367999998753
No 34
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=88.06 E-value=0.24 Score=44.64 Aligned_cols=48 Identities=29% Similarity=0.712 Sum_probs=37.1
Q ss_pred CCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCCcc
Q 002251 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGSC 246 (947)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg~C 246 (947)
....|.-|...-. ..+.|..|+ ..||..||..|.... ...||.||..-
T Consensus 21 ~~~~C~IC~~~~~-~p~~~~~Cg-H~FC~~Ci~~~~~~~-----~~~CP~Cr~~~ 68 (100)
T 3lrq_A 21 EVFRCFICMEKLR-DARLCPHCS-KLCCFSCIRRWLTEQ-----RAQCPHCRAPL 68 (100)
T ss_dssp HHTBCTTTCSBCS-SEEECTTTC-CEEEHHHHHHHHHHT-----CSBCTTTCCBC
T ss_pred CCCCCccCCcccc-CccccCCCC-ChhhHHHHHHHHHHC-----cCCCCCCCCcC
Confidence 5678999986654 467788999 589999999998642 16899999854
No 35
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=87.96 E-value=0.27 Score=51.56 Aligned_cols=50 Identities=8% Similarity=0.088 Sum_probs=39.2
Q ss_pred EEEeecCceEEecCCCcccccccccc-ceeecccc----------CCCCHHHHHHHHHHHh
Q 002251 828 SFEQHLGEAVFIPAGCPFQVRNLQST-VQLGLDFL----------FPESVGEAVRLAEEIR 877 (947)
Q Consensus 828 tf~Q~lGEAVFIPAGCPHQVRNLkSC-IKVAlDFV----------SPEnV~eC~rLteEfR 877 (947)
++.=..||.||||+|.||..+|.-.- .++.+-++ +|..+.++|+...+..
T Consensus 103 ~~~l~~GD~i~iP~g~~H~~~N~~~~~~~~~l~~~~~~~~~~~~~~p~~~e~~f~~l~~~~ 163 (239)
T 2xlg_A 103 SIQSEPKQLIYSPNHYMHGFVNPTDKTLPIVFVWMRNEVAPDFPYHDGGMREYFQAVGPRI 163 (239)
T ss_dssp EEECCTTEEEEECTTEEEEEECCSSSCEEEEEEEEECSSCTTCSCTTCSHHHHHHHHSCBC
T ss_pred EEEECCCCEEEECCCCCEEEEeCCCCCEEEEEEEEecccChhhccCcchHHHHHHHhhhhc
Confidence 78888999999999999999998753 23313334 8888999999887654
No 36
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=87.82 E-value=0.19 Score=45.07 Aligned_cols=49 Identities=6% Similarity=0.005 Sum_probs=34.3
Q ss_pred cCcceecCHHHHHHHHHHhCccceEEEeecCceEEecCCCccccccccccceee
Q 002251 804 YGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLG 857 (947)
Q Consensus 804 HDQ~fYLd~~hk~rLkEEyGVepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVA 857 (947)
+++-+|+-.-. -++.|..=++.=..||+++||||.||.++|...|.=+.
T Consensus 58 ~~e~~~vl~G~-----~~~~i~~~~~~l~~Gd~i~i~~~~~H~~~~~~~~~~~~ 106 (114)
T 2ozj_A 58 GDTLYLILQGE-----AVITFDDQKIDLVPEDVLMVPAHKIHAIAGKGRFKMLQ 106 (114)
T ss_dssp SCEEEEEEEEE-----EEEEETTEEEEECTTCEEEECTTCCBEEEEEEEEEEEE
T ss_pred CCeEEEEEeCE-----EEEEECCEEEEecCCCEEEECCCCcEEEEeCCCcEEEE
Confidence 35556654432 13455566777889999999999999999986654333
No 37
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=87.79 E-value=0.23 Score=54.43 Aligned_cols=40 Identities=20% Similarity=0.219 Sum_probs=34.5
Q ss_pred EEEeecCceEEecCCCccccccccccceeeccccCC-CCHHH
Q 002251 828 SFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFP-ESVGE 868 (947)
Q Consensus 828 tf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSP-EnV~e 868 (947)
++.=+.||+||||||.||+++|.... +..+=|.+| ..++.
T Consensus 292 ~~~l~~Gd~~~iPag~~h~~~~~~~~-~~~l~~~~g~~g~~~ 332 (350)
T 1juh_A 292 ATELGSGDVAFIPGGVEFKYYSEAYF-SKVLFVSSGSDGLDQ 332 (350)
T ss_dssp CEEECTTCEEEECTTCCEEEEESSSS-EEEEEEEESSSSHHH
T ss_pred EEEeCCCCEEEECCCCCEEEEecCCe-EEEEEEecCccchhh
Confidence 56668899999999999999998776 888888888 77766
No 38
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=87.74 E-value=0.19 Score=45.35 Aligned_cols=40 Identities=18% Similarity=0.266 Sum_probs=27.8
Q ss_pred cceEE-EeecCceEEecCCCcccccccccc--ceeeccccCCC
Q 002251 825 EPWSF-EQHLGEAVFIPAGCPFQVRNLQST--VQLGLDFLFPE 864 (947)
Q Consensus 825 epWtf-~Q~lGEAVFIPAGCPHQVRNLkSC--IKVAlDFVSPE 864 (947)
..-++ .=..||++|||+|.||+++|..+. .-+.+.|-+|+
T Consensus 63 ~~~~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~l~i~~~~~~ 105 (117)
T 2b8m_A 63 EDQEPHNYKEGNIVYVPFNVKMLIQNINSDILEFFVVKAPHPK 105 (117)
T ss_dssp TTSCCEEEETTCEEEECTTCEEEEECCSSSEEEEEEEECSCGG
T ss_pred CCEEEEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEEECCCCC
Confidence 33344 567899999999999999998753 33444444443
No 39
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=87.55 E-value=0.22 Score=43.68 Aligned_cols=41 Identities=22% Similarity=0.327 Sum_probs=29.4
Q ss_pred ccceEEEeecCceEEecCCCccccccccccceeeccccCCC
Q 002251 824 VEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPE 864 (947)
Q Consensus 824 VepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 864 (947)
|..=++.=..||+++||+|.+|+.+|..+---+.+-+++|.
T Consensus 59 ~~~~~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~v~~~~ 99 (113)
T 2gu9_A 59 VDGHTQALQAGSLIAIERGQAHEIRNTGDTPLKTVNFYHPP 99 (113)
T ss_dssp ETTEEEEECTTEEEEECTTCCEEEECCSSSCEEEEEEEESC
T ss_pred ECCEEEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEEECCC
Confidence 34446677899999999999999999865333344444553
No 40
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=87.45 E-value=0.22 Score=48.88 Aligned_cols=59 Identities=15% Similarity=0.039 Sum_probs=41.0
Q ss_pred cCCCcCcceecCHHHHHHHHHHhCccceEEEeecCceEEecCCCcccccccc-ccceeeccccCCC
Q 002251 800 THPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQ-STVQLGLDFLFPE 864 (947)
Q Consensus 800 ~hPIHDQ~fYLd~~hk~rLkEEyGVepWtf~Q~lGEAVFIPAGCPHQVRNLk-SCIKVAlDFVSPE 864 (947)
.|+ ++|-+|+-.-. -++-|..=++.=..||+||||+|.||+++|.. +---+.+-+++|+
T Consensus 73 ~H~-~~E~~~Vl~G~-----~~~~i~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~~~ 132 (167)
T 3ibm_A 73 RHE-HTHVVMVVRGH-----AEVVLDDRVEPLTPLDCVYIAPHAWHQIHATGANEPLGFLCIVDSD 132 (167)
T ss_dssp BCS-SCEEEEEEESE-----EEEEETTEEEEECTTCEEEECTTCCEEEEEESSSCCEEEEEEEESS
T ss_pred cCC-CcEEEEEEeCE-----EEEEECCEEEEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEEeCC
Confidence 466 67777765542 13445555777789999999999999999987 4333344455665
No 41
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=87.41 E-value=0.32 Score=40.90 Aligned_cols=46 Identities=22% Similarity=0.535 Sum_probs=34.2
Q ss_pred CCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002251 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (947)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (947)
....|--|...-.. .+.-+.|+ ..||..||..|... ...||.||..
T Consensus 14 ~~~~C~IC~~~~~~-p~~~~~Cg-H~fC~~Ci~~~~~~------~~~CP~Cr~~ 59 (72)
T 2djb_A 14 PYILCSICKGYLID-ATTITECL-HTFCKSCIVRHFYY------SNRCPKCNIV 59 (72)
T ss_dssp GGGSCTTTSSCCSS-CEECSSSC-CEECHHHHHHHHHH------CSSCTTTCCC
T ss_pred CCCCCCCCChHHHC-cCEECCCC-CHHHHHHHHHHHHc------CCcCCCcCcc
Confidence 56789999765544 34445788 58999999999842 4689999874
No 42
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=87.41 E-value=0.26 Score=43.42 Aligned_cols=25 Identities=20% Similarity=0.187 Sum_probs=21.5
Q ss_pred EEEeecCceEEecCCCccccccccc
Q 002251 828 SFEQHLGEAVFIPAGCPFQVRNLQS 852 (947)
Q Consensus 828 tf~Q~lGEAVFIPAGCPHQVRNLkS 852 (947)
++.=..||+|+||||.||+++|.-+
T Consensus 60 ~~~l~~Gd~~~~p~~~~H~~~N~g~ 84 (97)
T 2fqp_A 60 TSQLTRGVSYTRPEGVEHNVINPSD 84 (97)
T ss_dssp EEEECTTCCEEECTTCEEEEECCSS
T ss_pred EEEEcCCCEEEeCCCCcccCEeCCC
Confidence 4555779999999999999999864
No 43
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=86.93 E-value=0.3 Score=42.29 Aligned_cols=28 Identities=18% Similarity=0.232 Sum_probs=23.1
Q ss_pred EEEeecCceEEecCCCccccccccccce
Q 002251 828 SFEQHLGEAVFIPAGCPFQVRNLQSTVQ 855 (947)
Q Consensus 828 tf~Q~lGEAVFIPAGCPHQVRNLkSCIK 855 (947)
++.=..||+|+||+|.+|+++|...|.=
T Consensus 69 ~~~l~~Gd~~~ip~~~~H~~~~~~~~~~ 96 (102)
T 3d82_A 69 NITLQAGEMYVIPKGVEHKPMAKEECKI 96 (102)
T ss_dssp EEEEETTEEEEECTTCCBEEEEEEEEEE
T ss_pred EEEEcCCCEEEECCCCeEeeEcCCCCEE
Confidence 4555789999999999999999865543
No 44
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=86.78 E-value=0.21 Score=45.50 Aligned_cols=31 Identities=16% Similarity=0.202 Sum_probs=26.0
Q ss_pred ceEEEeecCceEEecCCCcccccccccccee
Q 002251 826 PWSFEQHLGEAVFIPAGCPFQVRNLQSTVQL 856 (947)
Q Consensus 826 pWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKV 856 (947)
.-++.=..||+|+||+|.||+.+|....-|+
T Consensus 67 g~~~~l~~GD~i~ip~g~~H~~~n~~~~~~~ 97 (101)
T 1o5u_A 67 GKKYVIEKGDLVTFPKGLRCRWKVLEPVRKH 97 (101)
T ss_dssp CCEEEEETTCEEEECTTCEEEEEEEEEEEEE
T ss_pred CCEEEECCCCEEEECCCCcEEEEeCCCeeEE
Confidence 5567788999999999999999998765443
No 45
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=86.71 E-value=0.34 Score=41.12 Aligned_cols=47 Identities=32% Similarity=0.708 Sum_probs=33.8
Q ss_pred CCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002251 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (947)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (947)
....|--|...-...++ -..|+ ..||..||..|.... -...||.||.
T Consensus 14 ~~~~C~IC~~~~~~p~~-~~~Cg-H~fC~~Ci~~~~~~~----~~~~CP~Cr~ 60 (74)
T 2yur_A 14 DELLCLICKDIMTDAVV-IPCCG-NSYCDECIRTALLES----DEHTCPTCHQ 60 (74)
T ss_dssp GGGSCSSSCCCCTTCEE-CSSSC-CEECTTHHHHHHHHS----SSSCCSSSCC
T ss_pred CCCCCcCCChHHhCCeE-cCCCC-CHHHHHHHHHHHHhc----CCCcCCCCCC
Confidence 56789999765555444 33388 589999999998531 1358999987
No 46
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=86.68 E-value=0.34 Score=40.94 Aligned_cols=52 Identities=21% Similarity=0.439 Sum_probs=35.9
Q ss_pred CCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCc-hhhhhhcCCCCCCcc
Q 002251 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIP-LEELEKVCPACRGSC 246 (947)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~-~edv~~~CP~Crg~C 246 (947)
....|--|...-...++ ..|+ ..||..||..|+.... .......||.||...
T Consensus 11 ~~~~C~IC~~~~~~p~~--l~Cg-H~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~ 63 (79)
T 2egp_A 11 EEVTCPICLELLTEPLS--LDCG-HSLCRACITVSNKEAVTSMGGKSSCPVCGISY 63 (79)
T ss_dssp CCCEETTTTEECSSCCC--CSSS-CCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCC
T ss_pred cCCCCcCCCcccCCeeE--CCCC-CHHHHHHHHHHHHhcccCCCCCCcCCCCCCcC
Confidence 56778888876554333 3688 5899999999987521 112356899998753
No 47
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=86.63 E-value=0.35 Score=38.13 Aligned_cols=46 Identities=22% Similarity=0.528 Sum_probs=33.8
Q ss_pred CCCCccccccCC--CCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002251 192 GGQICHQCRRND--RERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (947)
Q Consensus 192 ~~~~CHQCrqkt--~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (947)
....|--|...- ....+....|+ ..||..||..|... ...||.||.
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~Cg-H~fc~~Ci~~~~~~------~~~CP~Cr~ 51 (55)
T 2ecm_A 4 GSSGCPICLEDIHTSRVVAHVLPCG-HLLHRTCYEEMLKE------GYRCPLCSG 51 (55)
T ss_dssp CCCSCTTTCCCCCTTTSCEEECTTS-CEEETTHHHHHHHH------TCCCTTSCC
T ss_pred CCCcCcccChhhcCCCcCeEecCCC-CcccHHHHHHHHHc------CCcCCCCCC
Confidence 345688887653 23456677798 48999999999753 178999985
No 48
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=86.47 E-value=0.4 Score=46.82 Aligned_cols=41 Identities=22% Similarity=0.075 Sum_probs=30.2
Q ss_pred ccceEEEeecCceEEecCCCccccccccccceeeccccCCC
Q 002251 824 VEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPE 864 (947)
Q Consensus 824 VepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 864 (947)
|..=++.=..||+||||+|.+|+++|..+---+-+-+++|+
T Consensus 79 v~g~~~~l~~Gd~i~ip~~~~H~~~n~g~~~~~~l~i~~~~ 119 (156)
T 3kgz_A 79 VGETISDVAQGDLVFIPPMTWHQFRANRGDCLGFLCVVNAA 119 (156)
T ss_dssp ETTEEEEEETTCEEEECTTCCEEEECCSSSCEEEEEEEESS
T ss_pred ECCEEEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEEeCC
Confidence 44446667889999999999999999876433444555554
No 49
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=85.63 E-value=0.3 Score=50.38 Aligned_cols=59 Identities=19% Similarity=0.243 Sum_probs=40.9
Q ss_pred cCCCcCcceecCHHHHHHHHHHhCccceEEEeecCceEEecCCCccccccccccceeeccccCCC
Q 002251 800 THPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPE 864 (947)
Q Consensus 800 ~hPIHDQ~fYLd~~hk~rLkEEyGVepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 864 (947)
.|| +.|-+|+-.-. -++.|..=++.=..||+|+||+|+||+++|...---+.+++++|-
T Consensus 163 ~H~-~~e~~~Vl~G~-----~~~~i~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v~~p~ 221 (243)
T 3h7j_A 163 KHR-NEQIGICIGGG-----YDMTVEGCTVEMKFGTAYFCEPREDHGAINRSEKESKSINIFFPP 221 (243)
T ss_dssp CCS-SEEEEEECSSC-----EEEEETTEEEEECTTCEEEECTTCCEEEEECSSSCEEEEEEEESC
T ss_pred eCC-CcEEEEEEECE-----EEEEECCEEEEECCCCEEEECCCCcEEeEeCCCCCEEEEEEEcCC
Confidence 455 46777776552 134444556667899999999999999999966544556666663
No 50
>2dip_A Zinc finger SWIM domain-containing protein 2; ZZ domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=84.97 E-value=0.28 Score=45.30 Aligned_cols=36 Identities=31% Similarity=0.724 Sum_probs=30.1
Q ss_pred ccccccCCCcc-ccccccccCCCC-CcchhhhhhHHhh
Q 002251 317 DEQMCCNICRI-PIIDYHRHCGNC-MYDLCLSCCQDLR 352 (947)
Q Consensus 317 DERvyCDnCkT-SIvD~HRSCp~C-sYDLCLsCC~ELR 352 (947)
-..+.||.|.. +|+-+--.|..| .||||..|-..-+
T Consensus 29 H~gv~Cd~C~~~pI~G~RykC~~C~d~DLC~~C~~~~~ 66 (98)
T 2dip_A 29 HLGIPCNNCKQFPIEGKCYKCTECIEYHLCQECFDSYC 66 (98)
T ss_dssp CCCCCCSSSCCSSCCSCEEEESSSSSCEEEHHHHHTTS
T ss_pred cCCCCCcCCCCCCcccCeEECCCCCCccHHHHHHccCC
Confidence 34589999996 799988889999 7999999976543
No 51
>2fc7_A ZZZ3 protein; structure genomics, ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=84.89 E-value=0.29 Score=43.77 Aligned_cols=37 Identities=35% Similarity=0.786 Sum_probs=30.7
Q ss_pred cccccccCCCcc-ccccccccCCCCC----cchhhhhhHHhh
Q 002251 316 ADEQMCCNICRI-PIIDYHRHCGNCM----YDLCLSCCQDLR 352 (947)
Q Consensus 316 ~DERvyCDnCkT-SIvD~HRSCp~Cs----YDLCLsCC~ELR 352 (947)
.-..+.||.|.. +|+-+--.|..|. ||||..|-...+
T Consensus 18 ~H~~~~Cd~C~~~pI~G~RykC~~C~d~~~yDLC~~C~~~g~ 59 (82)
T 2fc7_A 18 QHVGFKCDNCGIEPIQGVRWHCQDCPPEMSLDFCDSCSDCLH 59 (82)
T ss_dssp EESSCCCSSSCCSSEESCEEEESSSCSSSCCEEEGGGTTCCC
T ss_pred eeCcCCCCCCCCCcceeceEECCcCCCCcceecHHHHHhCcc
Confidence 345789999996 8999888899886 999999987544
No 52
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=84.81 E-value=0.78 Score=36.18 Aligned_cols=45 Identities=24% Similarity=0.771 Sum_probs=31.2
Q ss_pred CCCccccccCCCC--CeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002251 193 GQICHQCRRNDRE--RVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (947)
Q Consensus 193 ~~~CHQCrqkt~~--~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (947)
...|.-|...-.. ..+....|+ ..||..||..|... ...||.||.
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~~C~-H~f~~~Ci~~w~~~------~~~CP~Cr~ 51 (55)
T 1iym_A 5 GVECAVCLAELEDGEEARFLPRCG-HGFHAECVDMWLGS------HSTCPLCRL 51 (55)
T ss_dssp SCCCTTTCCCCCTTSCCEECSSSC-CEECTTHHHHTTTT------CCSCSSSCC
T ss_pred CCcCccCCccccCCCceEECCCCC-CcccHHHHHHHHHc------CCcCcCCCC
Confidence 4467777655322 244455688 58999999999864 357999986
No 53
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=84.59 E-value=0.74 Score=38.11 Aligned_cols=47 Identities=23% Similarity=0.545 Sum_probs=33.4
Q ss_pred cCCCCccccccCCC-CCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002251 191 TGGQICHQCRRNDR-ERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (947)
Q Consensus 191 ~~~~~CHQCrqkt~-~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (947)
.....|.-|...-. ...+....|+ ..||..||..|... ...||.||.
T Consensus 12 ~~~~~C~IC~~~~~~~~~~~~~~C~-H~fc~~Ci~~~~~~------~~~CP~Cr~ 59 (69)
T 2kiz_A 12 DTEEKCTICLSILEEGEDVRRLPCM-HLFHQVCVDQWLIT------NKKCPICRV 59 (69)
T ss_dssp TCCCSBTTTTBCCCSSSCEEECTTS-CEEEHHHHHHHHHH------CSBCTTTCS
T ss_pred CCCCCCeeCCccccCCCcEEEeCCC-CHHHHHHHHHHHHc------CCCCcCcCc
Confidence 45678888876432 2345556788 58999999999753 346999986
No 54
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=84.33 E-value=0.37 Score=40.90 Aligned_cols=52 Identities=23% Similarity=0.566 Sum_probs=35.6
Q ss_pred CCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCCcc
Q 002251 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGSC 246 (947)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg~C 246 (947)
....|--|...-...++ ..|+ ..||..||..|+...........||.||...
T Consensus 18 ~~~~C~IC~~~~~~p~~--~~Cg-H~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~ 69 (85)
T 2ecv_A 18 EEVTCPICLELLTQPLS--LDCG-HSFCQACLTANHKKSMLDKGESSCPVCRISY 69 (85)
T ss_dssp CCCCCTTTCSCCSSCBC--CSSS-CCBCTTHHHHHHHHHHHTTSCCCCTTTCCSS
T ss_pred CCCCCCCCCcccCCcee--CCCC-CHHHHHHHHHHHHHhhcCCCCCcCCCCCCcc
Confidence 56789999876554333 3688 5899999999975311122357899998754
No 55
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=84.25 E-value=0.43 Score=39.40 Aligned_cols=46 Identities=24% Similarity=0.595 Sum_probs=33.0
Q ss_pred CCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002251 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (947)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (947)
....|--|...-...++ ..|+ ..||..||..|... ....||.||..
T Consensus 14 ~~~~C~IC~~~~~~p~~--~~Cg-H~fC~~Ci~~~~~~-----~~~~CP~Cr~~ 59 (66)
T 2ecy_A 14 DKYKCEKCHLVLCSPKQ--TECG-HRFCESCMAALLSS-----SSPKCTACQES 59 (66)
T ss_dssp CCEECTTTCCEESSCCC--CSSS-CCCCHHHHHHHHTT-----SSCCCTTTCCC
T ss_pred cCCCCCCCChHhcCeeE--CCCC-CHHHHHHHHHHHHh-----CcCCCCCCCcC
Confidence 45678888765554443 5788 58999999999851 23579999863
No 56
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=84.24 E-value=0.36 Score=47.45 Aligned_cols=43 Identities=9% Similarity=-0.034 Sum_probs=33.4
Q ss_pred hCccceEEEeecCceEEecCCCccccccccccceeeccccCCCC
Q 002251 822 FGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPES 865 (947)
Q Consensus 822 yGVepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEn 865 (947)
+.|..=++.=..||+||||+|.||+.+|.-+--- .+-|+.|..
T Consensus 139 ~~~~~~~~~l~~GD~i~i~~~~~H~~~n~~~~~~-~l~v~~~~~ 181 (192)
T 1y9q_A 139 VFFDEQWHELQQGEHIRFFSDQPHGYAAVTEKAV-FQNIVAYPR 181 (192)
T ss_dssp EEETTEEEEECTTCEEEEECSSSEEEEESSSCEE-EEEEEECCC
T ss_pred EEECCEEEEeCCCCEEEEcCCCCeEeECCCCCcE-EEEEEecCc
Confidence 5556667788899999999999999999865333 666777654
No 57
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=84.04 E-value=0.32 Score=44.11 Aligned_cols=23 Identities=26% Similarity=0.313 Sum_probs=20.4
Q ss_pred EeecCceEEecCCCccccccccc
Q 002251 830 EQHLGEAVFIPAGCPFQVRNLQS 852 (947)
Q Consensus 830 ~Q~lGEAVFIPAGCPHQVRNLkS 852 (947)
.=..||++|+|||.+|+++|--+
T Consensus 62 ~l~aGd~~~~p~G~~H~~~N~g~ 84 (98)
T 2ozi_A 62 QLKTGRSYARKAGVQHDVRNEST 84 (98)
T ss_dssp CBCTTCCEEECTTCEEEEEECSS
T ss_pred EECCCCEEEECCCCceeCEECCC
Confidence 44689999999999999999765
No 58
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=83.73 E-value=0.42 Score=45.88 Aligned_cols=25 Identities=24% Similarity=0.207 Sum_probs=23.2
Q ss_pred eEEEeecCceEEecCCCcccccccc
Q 002251 827 WSFEQHLGEAVFIPAGCPFQVRNLQ 851 (947)
Q Consensus 827 Wtf~Q~lGEAVFIPAGCPHQVRNLk 851 (947)
-++.=..||+|+||+|.||+++|..
T Consensus 88 ~~~~l~~Gd~i~ip~~~~H~~~n~~ 112 (163)
T 1lr5_A 88 QEIPFFQNTTFSIPVNDPHQVWNSD 112 (163)
T ss_dssp EEEEECTTEEEEECTTCCEEEECCC
T ss_pred EEEEeCCCCEEEECCCCcEEeEeCC
Confidence 7778889999999999999999986
No 59
>2e5r_A Dystrobrevin alpha; ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=83.72 E-value=0.36 Score=41.12 Aligned_cols=33 Identities=24% Similarity=0.789 Sum_probs=28.8
Q ss_pred cccCCCcc-ccccccccCCCC-CcchhhhhhHHhh
Q 002251 320 MCCNICRI-PIIDYHRHCGNC-MYDLCLSCCQDLR 352 (947)
Q Consensus 320 vyCDnCkT-SIvD~HRSCp~C-sYDLCLsCC~ELR 352 (947)
+.||.|.. +|+-+-=.|..| .||||..|-..-+
T Consensus 12 ~~Cd~C~~~pi~G~RykC~~C~d~DLC~~C~~~g~ 46 (63)
T 2e5r_A 12 VECSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGH 46 (63)
T ss_dssp SCCSSSCCCSSCSCEEEESSCSSCEECHHHHHHCC
T ss_pred CCCcCCCCcceecceEEecCCCCchhHHHHHhCCC
Confidence 88999996 599988899998 7999999998644
No 60
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=83.68 E-value=1.4 Score=34.96 Aligned_cols=45 Identities=31% Similarity=0.944 Sum_probs=32.6
Q ss_pred CCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCC
Q 002251 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPAC 242 (947)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~C 242 (947)
....|--|...-...++ ..|+ ..||..||..|+..+ .....||.|
T Consensus 14 ~~~~C~IC~~~~~~p~~--~~Cg-H~fC~~Ci~~~~~~~---~~~~~CP~C 58 (58)
T 2ecj_A 14 VEASCSVCLEYLKEPVI--IECG-HNFCKACITRWWEDL---ERDFPCPVC 58 (58)
T ss_dssp CCCBCSSSCCBCSSCCC--CSSC-CCCCHHHHHHHTTSS---CCSCCCSCC
T ss_pred cCCCCccCCcccCccEe--CCCC-CccCHHHHHHHHHhc---CCCCCCCCC
Confidence 56688889876655433 4688 489999999997642 135689988
No 61
>1tot_A CREB-binding protein; zinc binding, CBP, TAZ2, transferase; NMR {Mus musculus} SCOP: g.44.1.6
Probab=83.67 E-value=0.29 Score=40.27 Aligned_cols=33 Identities=33% Similarity=0.888 Sum_probs=26.8
Q ss_pred ccccCCCccccccccccCCCC-CcchhhhhhHHhh
Q 002251 319 QMCCNICRIPIIDYHRHCGNC-MYDLCLSCCQDLR 352 (947)
Q Consensus 319 RvyCDnCkTSIvD~HRSCp~C-sYDLCLsCC~ELR 352 (947)
.+.||+|...| -..-.|..| .||||..|-..-.
T Consensus 6 ~~~Cd~C~~~i-g~R~~C~~C~dyDLC~~C~~~~~ 39 (52)
T 1tot_A 6 VYTCNECKHHV-ETRWHCTVCEDYDLCINCYNTKS 39 (52)
T ss_dssp CEEETTTTEEE-SSEEEESSSSSCEECHHHHHHHC
T ss_pred EEECCCCCCCC-cceEEcCCCCCchhHHHHHhCCC
Confidence 47899999996 566678888 6999999987643
No 62
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=83.55 E-value=0.67 Score=39.18 Aligned_cols=47 Identities=19% Similarity=0.753 Sum_probs=34.2
Q ss_pred cCCCCccccccCCC-CCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002251 191 TGGQICHQCRRNDR-ERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (947)
Q Consensus 191 ~~~~~CHQCrqkt~-~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (947)
.....|.-|...-. ...+....|+ ..||..||..|... ...||.||.
T Consensus 21 ~~~~~C~IC~~~~~~~~~~~~l~C~-H~fh~~Ci~~w~~~------~~~CP~Cr~ 68 (75)
T 1x4j_A 21 SEQTLCVVCMCDFESRQLLRVLPCN-HEFHAKCVDKWLKA------NRTCPICRA 68 (75)
T ss_dssp SSCCEETTTTEECCBTCEEEEETTT-EEEETTHHHHHHHH------CSSCTTTCC
T ss_pred CCCCCCeECCcccCCCCeEEEECCC-CHhHHHHHHHHHHc------CCcCcCcCC
Confidence 35667888986542 3355666788 58999999999742 358999986
No 63
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=83.44 E-value=0.58 Score=42.68 Aligned_cols=29 Identities=14% Similarity=0.110 Sum_probs=24.7
Q ss_pred CccceEEEeecCceEEecCCCcccccccc
Q 002251 823 GVEPWSFEQHLGEAVFIPAGCPFQVRNLQ 851 (947)
Q Consensus 823 GVepWtf~Q~lGEAVFIPAGCPHQVRNLk 851 (947)
.|..-++.=..||+||||+|.||+.+|..
T Consensus 62 ~i~~~~~~l~~Gd~i~i~~~~~H~~~~~~ 90 (125)
T 3cew_A 62 TIDGEKIELQAGDWLRIAPDGKRQISAAS 90 (125)
T ss_dssp EETTEEEEEETTEEEEECTTCCEEEEEBT
T ss_pred EECCEEEEeCCCCEEEECCCCcEEEEcCC
Confidence 44556777889999999999999999984
No 64
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=83.29 E-value=1.1 Score=37.88 Aligned_cols=48 Identities=31% Similarity=0.750 Sum_probs=33.5
Q ss_pred cCCCCccccccCCCC-CeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002251 191 TGGQICHQCRRNDRE-RVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (947)
Q Consensus 191 ~~~~~CHQCrqkt~~-~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (947)
.....|.-|...-.. ..+.-..|+ ..||..||..|... ...||.||..
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~C~-H~fc~~Ci~~~~~~------~~~CP~Cr~~ 61 (78)
T 2ect_A 13 GSGLECPVCKEDYALGESVRQLPCN-HLFHDSCIVPWLEQ------HDSCPVCRKS 61 (78)
T ss_dssp SSSCCCTTTTSCCCTTSCEEECTTS-CEEETTTTHHHHTT------TCSCTTTCCC
T ss_pred CCCCCCeeCCccccCCCCEEEeCCC-CeecHHHHHHHHHc------CCcCcCcCCc
Confidence 356789999765432 233334588 48999999999853 2489999863
No 65
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=83.07 E-value=0.56 Score=41.62 Aligned_cols=38 Identities=13% Similarity=0.147 Sum_probs=26.6
Q ss_pred eEEEeecCceEEecCCCccccccccccceeeccccCCCCHH
Q 002251 827 WSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVG 867 (947)
Q Consensus 827 Wtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~ 867 (947)
=++.=..||+++||+|.||..+|...|.=+ ++.|....
T Consensus 67 ~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~l---~i~~~~~~ 104 (107)
T 2i45_A 67 GSMTIREGEMAVVPKSVSHRPRSENGCSLV---LIELSDPS 104 (107)
T ss_dssp CEEEECTTEEEEECTTCCEEEEEEEEEEEE---EEECC---
T ss_pred cEEEECCCCEEEECCCCcEeeEeCCCeEEE---EEECCCcc
Confidence 467778899999999999999997654322 44555443
No 66
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=82.73 E-value=0.52 Score=45.10 Aligned_cols=58 Identities=17% Similarity=0.142 Sum_probs=37.5
Q ss_pred CCCcCcceecCHHHHHHHHHHhCccceEEEeecCceEEecCC-CccccccccccceeeccccCC
Q 002251 801 HPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAG-CPFQVRNLQSTVQLGLDFLFP 863 (947)
Q Consensus 801 hPIHDQ~fYLd~~hk~rLkEEyGVepWtf~Q~lGEAVFIPAG-CPHQVRNLkSCIKVAlDFVSP 863 (947)
|+-.++.+|+-.-. -++-|..=++.=..||+|+||+| .+|+++|...---+.+-+.+|
T Consensus 65 H~~~~E~~~Vl~G~-----~~~~~~~~~~~l~~Gd~i~i~~~~~~H~~~n~~~~~~~~l~v~~p 123 (162)
T 3l2h_A 65 HHYEEEAVYVLSGK-----GTLTMENDQYPIAPGDFVGFPCHAAAHSISNDGTETLVCLVIGQR 123 (162)
T ss_dssp ESSCCEEEEEEESC-----EEEEETTEEEEECTTCEEEECTTSCCEEEECCSSSCEEEEEEEEC
T ss_pred CCCCCEEEEEEEEE-----EEEEECCEEEEeCCCCEEEECCCCceEEeEeCCCCCEEEEEEECC
Confidence 33345555554331 12334445677889999999998 999999986644445555555
No 67
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=82.51 E-value=0.71 Score=43.79 Aligned_cols=25 Identities=36% Similarity=0.340 Sum_probs=21.9
Q ss_pred EEEeecCceEEecCCCccccccccc
Q 002251 828 SFEQHLGEAVFIPAGCPFQVRNLQS 852 (947)
Q Consensus 828 tf~Q~lGEAVFIPAGCPHQVRNLkS 852 (947)
++.=..||+|+||+|.||+++|..+
T Consensus 89 ~~~l~~Gd~i~ip~g~~H~~~n~~~ 113 (148)
T 2oa2_A 89 QEEVFDDYAILIPAGTWHNVRNTGN 113 (148)
T ss_dssp EEEEETTCEEEECTTCEEEEEECSS
T ss_pred eEEECCCCEEEECCCCcEEEEECCC
Confidence 3677899999999999999999854
No 68
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=82.28 E-value=0.57 Score=46.24 Aligned_cols=42 Identities=19% Similarity=-0.100 Sum_probs=29.7
Q ss_pred CccceEEEeecCceEEecCCCccccccccccceeeccccCCC
Q 002251 823 GVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPE 864 (947)
Q Consensus 823 GVepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 864 (947)
-|..=++.=..||+||||+|.||+++|...---+.+-+++|+
T Consensus 87 ~v~g~~~~l~~GD~i~ip~g~~H~~~n~~~~~~~~l~i~~~~ 128 (166)
T 3jzv_A 87 MVGRAVSAVAPYDLVTIPGWSWHQFRAPADEALGFLCMVNAE 128 (166)
T ss_dssp EETTEEEEECTTCEEEECTTCCEEEECCTTSCEEEEEEEESS
T ss_pred EECCEEEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEEccC
Confidence 344556777889999999999999999765333334444543
No 69
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=81.71 E-value=1.3 Score=43.09 Aligned_cols=48 Identities=25% Similarity=0.556 Sum_probs=35.2
Q ss_pred CCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCCcc
Q 002251 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGSC 246 (947)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg~C 246 (947)
...+|--|...-. ..+.+..|+ ..||..||..|... ....||.||...
T Consensus 53 ~~~~C~IC~~~~~-~p~~~~~Cg-H~fC~~Ci~~~~~~-----~~~~CP~Cr~~~ 100 (165)
T 2ckl_B 53 SELMCPICLDMLK-NTMTTKECL-HRFCADCIITALRS-----GNKECPTCRKKL 100 (165)
T ss_dssp HHHBCTTTSSBCS-SEEEETTTC-CEEEHHHHHHHHHT-----TCCBCTTTCCBC
T ss_pred CCCCCcccChHhh-CcCEeCCCC-ChhHHHHHHHHHHh-----CcCCCCCCCCcC
Confidence 4568888865444 355666899 58999999999753 146799999754
No 70
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=81.40 E-value=1.4 Score=39.17 Aligned_cols=46 Identities=24% Similarity=0.543 Sum_probs=34.0
Q ss_pred CCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002251 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (947)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (947)
....|--|...-.. -+....|+ ..||..||..|... ...||.||..
T Consensus 21 ~~~~C~IC~~~~~~-p~~~~~Cg-H~fC~~Ci~~~~~~------~~~CP~Cr~~ 66 (99)
T 2y43_A 21 DLLRCGICFEYFNI-AMIIPQCS-HNYCSLCIRKFLSY------KTQCPTCCVT 66 (99)
T ss_dssp HHTBCTTTCSBCSS-EEECTTTC-CEEEHHHHHHHHTT------CCBCTTTCCB
T ss_pred CCCCcccCChhhCC-cCEECCCC-CHhhHHHHHHHHHC------CCCCCCCCCc
Confidence 45678888765544 34445788 58999999999874 2589999874
No 71
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=80.58 E-value=0.93 Score=37.73 Aligned_cols=48 Identities=25% Similarity=0.468 Sum_probs=34.4
Q ss_pred CCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002251 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (947)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (947)
....|--|...-...++. .|+ ..||..||..|.... .....||.||..
T Consensus 19 ~~~~C~IC~~~~~~~~~~--~Cg-H~fC~~Ci~~~~~~~---~~~~~CP~Cr~~ 66 (73)
T 2ysl_A 19 EEVICPICLDILQKPVTI--DCG-HNFCLKCITQIGETS---CGFFKCPLCKTS 66 (73)
T ss_dssp CCCBCTTTCSBCSSEEEC--TTC-CEEEHHHHHHHCSSS---CSCCCCSSSCCC
T ss_pred cCCEeccCCcccCCeEEc--CCC-ChhhHHHHHHHHHcC---CCCCCCCCCCCc
Confidence 566888888765543332 799 589999999998621 234589999874
No 72
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=80.51 E-value=1.4 Score=38.85 Aligned_cols=47 Identities=23% Similarity=0.584 Sum_probs=33.6
Q ss_pred CCCCccccccCCC-CCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002251 192 GGQICHQCRRNDR-ERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (947)
Q Consensus 192 ~~~~CHQCrqkt~-~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (947)
....|.-|...-. +..+....|+ ..||..||..|... ...||.||..
T Consensus 39 ~~~~C~IC~~~~~~~~~~~~l~C~-H~Fh~~Ci~~wl~~------~~~CP~Cr~~ 86 (91)
T 2l0b_A 39 QEMCCPICCSEYVKGDVATELPCH-HYFHKPCVSIWLQK------SGTCPVCRCM 86 (91)
T ss_dssp SCSEETTTTEECCTTCEEEEETTT-EEEEHHHHHHHHTT------TCBCTTTCCB
T ss_pred CCCCCcccChhhcCCCcEEecCCC-ChHHHHHHHHHHHc------CCcCcCcCcc
Confidence 5667999975542 2344445688 58999999999864 2489999963
No 73
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=80.49 E-value=0.34 Score=48.28 Aligned_cols=45 Identities=16% Similarity=0.096 Sum_probs=35.4
Q ss_pred cCCCcCcceecCH--HHHHHHHHHhCccceEEEeecCceEEecCCCcccccc
Q 002251 800 THPLYGEVVYLNG--DHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRN 849 (947)
Q Consensus 800 ~hPIHDQ~fYLd~--~hk~rLkEEyGVepWtf~Q~lGEAVFIPAGCPHQVRN 849 (947)
.|+-+++.||+-. .. -++-|.+=++.=..||+|+||+|.+|++.+
T Consensus 62 ~H~~~~E~~yVLe~~G~-----g~v~idge~~~l~~GD~v~IPpg~~H~i~g 108 (157)
T 4h7l_A 62 YHREHQEIYVVLDHAAH-----ATIELNGQSYPLTKLLAISIPPLVRHRIVG 108 (157)
T ss_dssp BCSSCEEEEEEEEECTT-----CEEEETTEEEECCTTEEEEECTTCCEEEES
T ss_pred ECCCCcEEEEEEecCcE-----EEEEECCEEEEeCCCCEEEECCCCeEeeEC
Confidence 5777788888765 32 235566667888999999999999999985
No 74
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=80.48 E-value=0.66 Score=42.72 Aligned_cols=46 Identities=15% Similarity=0.126 Sum_probs=30.9
Q ss_pred CCCcCcceecCHHHHHHHHHHhCccceEEEeecCceEEecCCCccccccccc
Q 002251 801 HPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQS 852 (947)
Q Consensus 801 hPIHDQ~fYLd~~hk~rLkEEyGVepWtf~Q~lGEAVFIPAGCPHQVRNLkS 852 (947)
|+ ..+-+|+..-. -++.|..=++.=..||+|+||+|.||+.+|..+
T Consensus 66 H~-~~e~~~Vl~G~-----~~~~i~~~~~~l~~Gd~i~ip~g~~H~~~~~~~ 111 (126)
T 1vj2_A 66 HP-WEHEIFVLKGK-----LTVLKEQGEETVEEGFYIFVEPNEIHGFRNDTD 111 (126)
T ss_dssp CS-SCEEEEEEESE-----EEEECSSCEEEEETTEEEEECTTCCEEEECCSS
T ss_pred CC-CcEEEEEEEeE-----EEEEECCEEEEECCCCEEEECCCCcEEeEeCCC
Confidence 44 44555554432 123344445666789999999999999999864
No 75
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=80.41 E-value=0.77 Score=45.28 Aligned_cols=56 Identities=20% Similarity=0.331 Sum_probs=40.0
Q ss_pred CcCcceecCHHHHHHHHHHhCccceEEEeecCceEEecCCCccccccccccceeeccccCCCC
Q 002251 803 LYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPES 865 (947)
Q Consensus 803 IHDQ~fYLd~~hk~rLkEEyGVepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEn 865 (947)
=+++.+|+-.-. -++-|.+=++.=..||+||||+|.+|..+|...|..+++ +.|-+
T Consensus 83 ~~eE~~yVLeG~-----~~l~i~g~~~~l~~GD~i~iP~G~~h~~~n~~~a~~l~V--~~P~~ 138 (151)
T 4axo_A 83 NYDEIDYVIDGT-----LDIIIDGRKVSASSGELIFIPKGSKIQFSVPDYARFIYV--TYPAD 138 (151)
T ss_dssp SSEEEEEEEEEE-----EEEEETTEEEEEETTCEEEECTTCEEEEEEEEEEEEEEE--EECSC
T ss_pred CCcEEEEEEEeE-----EEEEECCEEEEEcCCCEEEECCCCEEEEEeCCCEEEEEE--ECCCC
Confidence 356777765432 123345567888899999999999999999988877766 34543
No 76
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=80.25 E-value=0.76 Score=42.29 Aligned_cols=60 Identities=20% Similarity=0.250 Sum_probs=38.9
Q ss_pred cCCCcCcceecCHHHHHHHHHHhCccc-eEEEeecCceEEecCCCccccccccccceeeccccCCCC
Q 002251 800 THPLYGEVVYLNGDHKRKLKEEFGVEP-WSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPES 865 (947)
Q Consensus 800 ~hPIHDQ~fYLd~~hk~rLkEEyGVep-Wtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEn 865 (947)
.|+-.++.+|+-.-. -++-+.. -++.=..||+|+||+|.||..+|...-. ..+-+++|..
T Consensus 60 ~H~~~~E~~~vl~G~-----~~~~~~~~~~~~l~~Gd~~~ip~g~~H~~~~~~~~~-~~l~~~~p~~ 120 (134)
T 2o8q_A 60 THTVGFQLFYVLRGW-----VEFEYEDIGAVMLEAGGSAFQPPGVRHRELRHSDDL-EVLEIVSPAG 120 (134)
T ss_dssp EECCSCEEEEEEESE-----EEEEETTTEEEEEETTCEEECCTTCCEEEEEECTTC-EEEEEESSTT
T ss_pred ECCCCcEEEEEEeCE-----EEEEECCcEEEEecCCCEEEECCCCcEEeEeCCCCe-EEEEEECCCc
Confidence 455556666664432 1233444 5777889999999999999999965423 3344556654
No 77
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=80.12 E-value=1.2 Score=36.61 Aligned_cols=46 Identities=22% Similarity=0.706 Sum_probs=32.7
Q ss_pred CCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002251 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (947)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (947)
....|.-|...-.. .+....|+ ..||..||.+|... ...||.||..
T Consensus 4 ~~~~C~IC~~~~~~-~~~~~~C~-H~fc~~Ci~~~~~~------~~~CP~Cr~~ 49 (68)
T 1chc_A 4 VAERCPICLEDPSN-YSMALPCL-HAFCYVCITRWIRQ------NPTCPLCKVP 49 (68)
T ss_dssp CCCCCSSCCSCCCS-CEEETTTT-EEESTTHHHHHHHH------SCSTTTTCCC
T ss_pred CCCCCeeCCccccC-CcEecCCC-CeeHHHHHHHHHhC------cCcCcCCChh
Confidence 35578888766443 23556788 57999999999742 3589999864
No 78
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=79.78 E-value=0.96 Score=45.25 Aligned_cols=40 Identities=13% Similarity=0.155 Sum_probs=30.6
Q ss_pred cceEEEeecCceEEecCCCccccccccccceeeccccCCC
Q 002251 825 EPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPE 864 (947)
Q Consensus 825 epWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 864 (947)
+.+++.=..||+|+||+|.||+.+|..+--=+.+.+++|.
T Consensus 117 ~~~~~~l~~GD~v~ip~g~~H~~~N~g~~~~~~l~v~~~~ 156 (190)
T 1x82_A 117 DAKWISMEPGTVVYVPPYWAHRTVNIGDEPFIFLAIYPAD 156 (190)
T ss_dssp CEEEEEECTTCEEEECTTCEEEEEECSSSCEEEEEEEETT
T ss_pred cEEEEEECCCcEEEECCCCeEEEEECCcccEEEEEEECCC
Confidence 4566888999999999999999999876433445555554
No 79
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=79.13 E-value=1.5 Score=39.61 Aligned_cols=46 Identities=22% Similarity=0.594 Sum_probs=34.5
Q ss_pred CCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002251 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (947)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (947)
....|--|...-.. -+....|+ ..||..||..|.... ..||.||..
T Consensus 14 ~~~~C~IC~~~~~~-p~~~~~Cg-H~fC~~Ci~~~~~~~------~~CP~Cr~~ 59 (108)
T 2ckl_A 14 PHLMCVLCGGYFID-ATTIIECL-HSFCKTCIVRYLETS------KYCPICDVQ 59 (108)
T ss_dssp GGTBCTTTSSBCSS-EEEETTTC-CEEEHHHHHHHHTSC------SBCTTTCCB
T ss_pred CcCCCccCChHHhC-cCEeCCCC-ChhhHHHHHHHHHhC------CcCcCCCcc
Confidence 56678888765544 44555788 589999999998752 689999874
No 80
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=79.12 E-value=0.67 Score=38.48 Aligned_cols=44 Identities=27% Similarity=0.830 Sum_probs=32.4
Q ss_pred cCCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002251 191 TGGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (947)
Q Consensus 191 ~~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (947)
.....|--|...-.. .-..|+ ..||..||..|... ...||.||.
T Consensus 13 ~~~~~C~IC~~~~~~---~~~~Cg-H~fc~~Ci~~~~~~------~~~CP~Cr~ 56 (70)
T 2ecn_A 13 TDEEECCICMDGRAD---LILPCA-HSFCQKCIDKWSDR------HRNCPICRL 56 (70)
T ss_dssp CCCCCCSSSCCSCCS---EEETTT-EEECHHHHHHSSCC------CSSCHHHHH
T ss_pred CCCCCCeeCCcCccC---cccCCC-CcccHHHHHHHHHC------cCcCCCcCC
Confidence 356789899877655 224577 57999999999863 457998874
No 81
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=78.95 E-value=1 Score=36.76 Aligned_cols=48 Identities=23% Similarity=0.706 Sum_probs=33.7
Q ss_pred cCCCCccccccCCC-----CCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002251 191 TGGQICHQCRRNDR-----ERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (947)
Q Consensus 191 ~~~~~CHQCrqkt~-----~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (947)
.....|--|...-. ...+.-..|+ ..||..||..|... ...||.||..
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~~~~Cg-H~fc~~Ci~~~~~~------~~~CP~Cr~~ 65 (69)
T 2ea6_A 13 SGTVSCPICMDGYSEIVQNGRLIVSTECG-HVFCSQCLRDSLKN------ANTCPTCRKK 65 (69)
T ss_dssp TCCCCCTTTCCCHHHHTTTTCCEEECSSS-CEEEHHHHHHHHHH------CSSCTTTCCC
T ss_pred CCCCCCcccCccccccccccCCeEeCCCC-ChhcHHHHHHHHHc------CCCCCCCCCc
Confidence 35667888876432 2334556788 58999999999753 4589999863
No 82
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=78.85 E-value=1.6 Score=37.19 Aligned_cols=41 Identities=24% Similarity=0.635 Sum_probs=31.3
Q ss_pred CCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002251 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (947)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (947)
....|--|.....+.++ ..|+...||..|+..| ..||.||.
T Consensus 23 ~~~~C~iC~~~~~~~~~--~pCgH~~~C~~C~~~~----------~~CP~Cr~ 63 (74)
T 4ic3_A 23 EEKLCKICMDRNIAIVF--VPCGHLVTCKQCAEAV----------DKCPMCYT 63 (74)
T ss_dssp HHTBCTTTSSSBCCEEE--ETTCCBCCCHHHHTTC----------SBCTTTCC
T ss_pred cCCCCCCCCCCCCCEEE--cCCCChhHHHHhhhcC----------ccCCCcCc
Confidence 45689999877665443 3688544999999987 68999996
No 83
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=78.61 E-value=1.2 Score=40.54 Aligned_cols=56 Identities=14% Similarity=0.127 Sum_probs=35.5
Q ss_pred hCccceEEEeecCceEEecCCCcccccccc--ccceeeccccCCCCHHHHHHHHHHHhcCCC
Q 002251 822 FGVEPWSFEQHLGEAVFIPAGCPFQVRNLQ--STVQLGLDFLFPESVGEAVRLAEEIRCLPN 881 (947)
Q Consensus 822 yGVepWtf~Q~lGEAVFIPAGCPHQVRNLk--SCIKVAlDFVSPEnV~eC~rLteEfR~Lp~ 881 (947)
+-|..=++.=..||+|+||+|.+|+++|.. .+.-+++ +++|+-+. .+..+...-|.
T Consensus 67 ~~i~~~~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~i-~f~~~~~~---~~~~~~~~~~~ 124 (128)
T 4i4a_A 67 IRINDEDFPVTKGDLIIIPLDSEHHVINNNQEDFHFYTI-WWDKESTL---NFLTRLEQDHH 124 (128)
T ss_dssp EEETTEEEEEETTCEEEECTTCCEEEEECSSSCEEEEEE-EECHHHHH---HHHHHHHHC--
T ss_pred EEECCEEEEECCCcEEEECCCCcEEeEeCCCCCEEEEEE-EECHHHHH---HHHHhcccccc
Confidence 445566777899999999999999999974 3333343 34454443 45555544443
No 84
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=78.52 E-value=0.96 Score=42.14 Aligned_cols=54 Identities=15% Similarity=0.289 Sum_probs=33.7
Q ss_pred cCcceecCHHHHHHHHHHhCccceEEEeecCceEEecCCCccccccc-cccceeeccccCCC
Q 002251 804 YGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNL-QSTVQLGLDFLFPE 864 (947)
Q Consensus 804 HDQ~fYLd~~hk~rLkEEyGVepWtf~Q~lGEAVFIPAGCPHQVRNL-kSCIKVAlDFVSPE 864 (947)
+++.+|+-.-. -++-+.+=++.=..||+||||||.+|..+|. ..+. .+--++|-
T Consensus 59 ~~E~~~Vl~G~-----~~~~~~g~~~~l~~GD~v~ip~g~~H~~~~~~~~~~--~l~v~~P~ 113 (119)
T 3lwc_A 59 VDDVMIVLEGR-----LSVSTDGETVTAGPGEIVYMPKGETVTIRSHEEGAL--TAYVTYPH 113 (119)
T ss_dssp SEEEEEEEEEE-----EEEEETTEEEEECTTCEEEECTTCEEEEEEEEEEEE--EEEEEECC
T ss_pred CCEEEEEEeCE-----EEEEECCEEEEECCCCEEEECCCCEEEEEcCCCCeE--EEEEECCC
Confidence 45666654431 1122234466778999999999999999997 3333 33345553
No 85
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=78.47 E-value=1.9 Score=36.41 Aligned_cols=46 Identities=22% Similarity=0.372 Sum_probs=34.4
Q ss_pred CCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002251 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (947)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (947)
....|--|..--.+.++ ..|+ ..||..||..|... -...||.||..
T Consensus 7 ~~~~C~IC~~~~~~Pv~--~~Cg-H~fc~~Ci~~~~~~-----~~~~CP~C~~~ 52 (78)
T 1t1h_A 7 EYFRCPISLELMKDPVI--VSTG-QTYERSSIQKWLDA-----GHKTCPKSQET 52 (78)
T ss_dssp SSSSCTTTSCCCSSEEE--ETTT-EEEEHHHHHHHHTT-----TCCBCTTTCCB
T ss_pred ccCCCCCccccccCCEE--cCCC-CeecHHHHHHHHHH-----CcCCCCCCcCC
Confidence 56788888876655444 3688 58999999999863 14689999863
No 86
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=78.35 E-value=1 Score=37.19 Aligned_cols=48 Identities=23% Similarity=0.706 Sum_probs=34.2
Q ss_pred cCCCCccccccCCC-----CCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002251 191 TGGQICHQCRRNDR-----ERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (947)
Q Consensus 191 ~~~~~CHQCrqkt~-----~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (947)
.....|--|...-. +..+....|+ -.||..||..|... ...||.||..
T Consensus 8 ~~~~~C~IC~~~~~~~~~~~~~~~~~~Cg-H~fc~~Ci~~~~~~------~~~CP~Cr~~ 60 (71)
T 3ng2_A 8 SGTVSCPICMDGYSEIVQNGRLIVSTECG-HVFCSQCLRDSLKN------ANTCPTCRKK 60 (71)
T ss_dssp TTCCBCTTTCCBHHHHHTTTCCEEECTTS-CEEEHHHHHHHHHH------CSBCTTTCCB
T ss_pred CCCCCCcccChhhhccccccCCeEeCCCC-ChHhHHHHHHHHHc------CCCCCCCCCc
Confidence 35667888876532 2344566788 58999999999753 2589999874
No 87
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=77.63 E-value=0.89 Score=42.14 Aligned_cols=47 Identities=21% Similarity=0.506 Sum_probs=33.8
Q ss_pred CCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCCcc
Q 002251 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGSC 246 (947)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg~C 246 (947)
....|.-|...-...++ ..|+ ..||..||..|... ....||.||...
T Consensus 51 ~~~~C~IC~~~~~~p~~--~~Cg-H~fC~~Ci~~~~~~-----~~~~CP~Cr~~~ 97 (124)
T 3fl2_A 51 ETFQCICCQELVFRPIT--TVCQ-HNVCKDCLDRSFRA-----QVFSCPACRYDL 97 (124)
T ss_dssp HHTBCTTTSSBCSSEEE--CTTS-CEEEHHHHHHHHHT-----TCCBCTTTCCBC
T ss_pred cCCCCCcCChHHcCcEE--eeCC-CcccHHHHHHHHhH-----CcCCCCCCCccC
Confidence 45678889866554443 3798 58999999999852 234899999754
No 88
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=77.63 E-value=1 Score=44.28 Aligned_cols=45 Identities=11% Similarity=0.115 Sum_probs=32.6
Q ss_pred cCCCcCcceecCHHHHHHHHHHhCccc----eEEEeecCceEEecCCCccccccc
Q 002251 800 THPLYGEVVYLNGDHKRKLKEEFGVEP----WSFEQHLGEAVFIPAGCPFQVRNL 850 (947)
Q Consensus 800 ~hPIHDQ~fYLd~~hk~rLkEEyGVep----Wtf~Q~lGEAVFIPAGCPHQVRNL 850 (947)
.||- ++.+|+-.-. -++.|.. =++.=..||+|+||+|.||+++|.
T Consensus 137 ~h~~-~E~~~Vl~G~-----~~~~~~~~~~~~~~~l~~GD~~~~~~~~~H~~~n~ 185 (198)
T 2bnm_A 137 GHAG-NEFLFVLEGE-----IHMKWGDKENPKEALLPTGASMFVEEHVPHAFTAA 185 (198)
T ss_dssp CCSS-CEEEEEEESC-----EEEEESCTTSCEEEEECTTCEEEECTTCCEEEEES
T ss_pred cCCC-eEEEEEEeee-----EEEEECCcCCcccEEECCCCEEEeCCCCceEEEec
Confidence 4444 5666664432 1344555 677888999999999999999998
No 89
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=77.57 E-value=1.4 Score=40.12 Aligned_cols=46 Identities=24% Similarity=0.539 Sum_probs=33.7
Q ss_pred CCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002251 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (947)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (947)
....|.-|...-...++. .|+ ..||..||..|... -...||.||..
T Consensus 14 ~~~~C~iC~~~~~~p~~~--~Cg-H~fC~~Ci~~~~~~-----~~~~CP~Cr~~ 59 (115)
T 3l11_A 14 SECQCGICMEILVEPVTL--PCN-HTLCKPCFQSTVEK-----ASLCCPFCRRR 59 (115)
T ss_dssp HHHBCTTTCSBCSSCEEC--TTS-CEECHHHHCCCCCT-----TTSBCTTTCCB
T ss_pred CCCCCccCCcccCceeEc--CCC-CHHhHHHHHHHHhH-----CcCCCCCCCcc
Confidence 456788888665554443 788 58999999999853 13689999873
No 90
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=77.40 E-value=1 Score=43.83 Aligned_cols=58 Identities=17% Similarity=0.009 Sum_probs=38.4
Q ss_pred CCCcCcceecCHHHHHHHHHHhCccceEEEeecCceEEecCC--CccccccccccceeeccccCC
Q 002251 801 HPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAG--CPFQVRNLQSTVQLGLDFLFP 863 (947)
Q Consensus 801 hPIHDQ~fYLd~~hk~rLkEEyGVepWtf~Q~lGEAVFIPAG--CPHQVRNLkSCIKVAlDFVSP 863 (947)
|+-.++-+|+..-. -++-|..=++.=..||+|+||+| .+|+++|..+---+.+-+.+|
T Consensus 62 H~~~eE~~~Vl~G~-----~~~~~~~~~~~l~~GD~i~ip~~~~~~H~~~n~~~~~~~~l~v~~p 121 (163)
T 3i7d_A 62 HMEQDEFVMVTEGA-----LVLVDDQGEHPMVPGDCAAFPAGDPNGHQFVNRTDAPATFLVVGTR 121 (163)
T ss_dssp ESSCCEEEEEEESC-----EEEEETTEEEEECTTCEEEECTTCCCCBEEECCSSSCEEEEEEEEC
T ss_pred CCCCcEEEEEEECE-----EEEEECCEEEEeCCCCEEEECCCCCcceEEEECCCCCEEEEEEECC
Confidence 44335666665442 12344455777889999999999 999999987644444545444
No 91
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=77.10 E-value=2.6 Score=35.21 Aligned_cols=46 Identities=22% Similarity=0.619 Sum_probs=31.4
Q ss_pred CCCCccccccCCCC-CeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002251 192 GGQICHQCRRNDRE-RVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (947)
Q Consensus 192 ~~~~CHQCrqkt~~-~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (947)
....|--|...-.. ..+.-..|+ ..||..||..|... ...||.||.
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~C~-H~f~~~Ci~~~~~~------~~~CP~Cr~ 60 (74)
T 2ep4_A 14 LHELCAVCLEDFKPRDELGICPCK-HAFHRKCLIKWLEV------RKVCPLCNM 60 (74)
T ss_dssp CSCBCSSSCCBCCSSSCEEEETTT-EEEEHHHHHHHHHH------CSBCTTTCC
T ss_pred CCCCCcCCCcccCCCCcEEEcCCC-CEecHHHHHHHHHc------CCcCCCcCc
Confidence 56678888876422 222222587 58999999999743 248999986
No 92
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=76.75 E-value=0.92 Score=46.35 Aligned_cols=48 Identities=21% Similarity=0.303 Sum_probs=35.2
Q ss_pred cCCCcCcceecCHHHHHHHHHHhCccceEEEeecCceEEecCCCcccccc-cccc
Q 002251 800 THPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRN-LQST 853 (947)
Q Consensus 800 ~hPIHDQ~fYLd~~hk~rLkEEyGVepWtf~Q~lGEAVFIPAGCPHQVRN-LkSC 853 (947)
.|| ++|.+|+-.-. -++.|..=++.=..||+|+||||+||.++| ...|
T Consensus 170 ~H~-~~e~~~Vl~G~-----~~~~i~g~~~~l~~Gd~i~ip~~~~H~~~~~~~~~ 218 (227)
T 3rns_A 170 KAP-GDALVTVLDGE-----GKYYVDGKPFIVKKGESAVLPANIPHAVEAETENF 218 (227)
T ss_dssp CCS-SEEEEEEEEEE-----EEEEETTEEEEEETTEEEEECTTSCEEEECCSSCE
T ss_pred ECC-CcEEEEEEeEE-----EEEEECCEEEEECCCCEEEECCCCcEEEEeCCCCE
Confidence 466 56777765542 234455556777899999999999999999 7654
No 93
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=76.64 E-value=3.4 Score=35.81 Aligned_cols=32 Identities=28% Similarity=0.805 Sum_probs=24.0
Q ss_pred eEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002251 207 VVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (947)
Q Consensus 207 ~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (947)
.+.-..|+ -.|+..||..|.... ..||.||..
T Consensus 42 ~~~~~~C~-H~FH~~Ci~~Wl~~~------~~CP~CR~~ 73 (81)
T 2ecl_A 42 VVVWGECN-HSFHNCCMSLWVKQN------NRCPLCQQD 73 (81)
T ss_dssp CEEEETTS-CEEEHHHHHHHTTTC------CBCTTTCCB
T ss_pred EEEeCCCC-CccChHHHHHHHHhC------CCCCCcCCC
Confidence 33334688 589999999998753 389999963
No 94
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=76.64 E-value=0.89 Score=42.91 Aligned_cols=30 Identities=13% Similarity=0.187 Sum_probs=25.3
Q ss_pred EEeecCceEEecCCCccccccccccceeec
Q 002251 829 FEQHLGEAVFIPAGCPFQVRNLQSTVQLGL 858 (947)
Q Consensus 829 f~Q~lGEAVFIPAGCPHQVRNLkSCIKVAl 858 (947)
+.=..||+|+||+|.||..+|+...-|+-+
T Consensus 89 ~~l~~GD~~~ip~g~~h~~~~~~~~rK~yv 118 (123)
T 3bcw_A 89 HAVKAGDAFIMPEGYTGRWEVDRHVKKIYF 118 (123)
T ss_dssp EEEETTCEEEECTTCCCEEEEEEEEEEEEE
T ss_pred EEECCCCEEEECCCCeEEEEECCceeEEEE
Confidence 445789999999999999999988777643
No 95
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=76.63 E-value=1.1 Score=47.49 Aligned_cols=67 Identities=15% Similarity=0.115 Sum_probs=46.4
Q ss_pred cCCCcCcceecCHHHHHHHHHHhCccceEEEeecCceEEecCCCccccccccccceeeccccCCCCHHHHHHH
Q 002251 800 THPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRL 872 (947)
Q Consensus 800 ~hPIHDQ~fYLd~~hk~rLkEEyGVepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~eC~rL 872 (947)
.||-.++-+|+-.-. -++.|..-++.=..||.++||+|+||+.+|... --..+-+++|....+-++-
T Consensus 235 ~H~~~~e~~~vl~G~-----~~~~i~~~~~~l~~GD~~~ip~~~~H~~~n~~~-~~~~l~v~~~~~~~~~~~~ 301 (337)
T 1y3t_A 235 YHEYHTETFYCLEGQ-----MTMWTDGQEIQLNPGDFLHVPANTVHSYRLDSH-YTKMVGVLVPGLFEPFFRT 301 (337)
T ss_dssp ECSSCEEEEEEEESC-----EEEEETTEEEEECTTCEEEECTTCCEEEEECSS-SEEEEEEEESSTTTHHHHH
T ss_pred CCCCCcEEEEEEeCE-----EEEEECCEEEEECCCCEEEECCCCeEEEEECCC-CeEEEEEEcCccHHHHHHH
Confidence 344334555554432 134556667888999999999999999999976 4445566788887665543
No 96
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=76.57 E-value=1.1 Score=43.42 Aligned_cols=47 Identities=23% Similarity=0.570 Sum_probs=34.6
Q ss_pred CCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCCcc
Q 002251 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGSC 246 (947)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg~C 246 (947)
....|--|...-...++ ..|+ -.||..||..|... -...||.||...
T Consensus 77 ~~~~C~IC~~~~~~pv~--~~Cg-H~fC~~Ci~~~~~~-----~~~~CP~Cr~~~ 123 (150)
T 1z6u_A 77 QSFMCVCCQELVYQPVT--TECF-HNVCKDCLQRSFKA-----QVFSCPACRHDL 123 (150)
T ss_dssp HHTBCTTTSSBCSSEEE--CTTS-CEEEHHHHHHHHHT-----TCCBCTTTCCBC
T ss_pred cCCEeecCChhhcCCEE--cCCC-CchhHHHHHHHHHh-----CCCcCCCCCccC
Confidence 34678889876555444 5899 58999999999853 234799998754
No 97
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=76.25 E-value=1.8 Score=43.47 Aligned_cols=39 Identities=21% Similarity=0.139 Sum_probs=29.7
Q ss_pred eEEEeecCceEEecCCCccccccccccceeeccccCCCC
Q 002251 827 WSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPES 865 (947)
Q Consensus 827 Wtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEn 865 (947)
.++.=..||+++||+|.+|.++|.-.---+.+-+.++.+
T Consensus 119 ~~~~l~~GD~~~iP~g~~H~~~N~g~~~~~~l~v~~~~~ 157 (201)
T 1fi2_A 119 YSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNSQN 157 (201)
T ss_dssp EEEEEETTCEEEECTTCCEEEEECSSSCEEEEEEESSSC
T ss_pred EEEEECCCCEEEECCCCeEEEEeCCCCCEEEEEEECCCC
Confidence 366678899999999999999998654444555566555
No 98
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=74.93 E-value=0.89 Score=36.60 Aligned_cols=32 Identities=22% Similarity=0.818 Sum_probs=24.4
Q ss_pred eEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002251 207 VVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (947)
Q Consensus 207 ~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (947)
.+.-..|+ ..||..||..|... ...||.||..
T Consensus 22 ~~~~~~Cg-H~fc~~Ci~~~~~~------~~~CP~Cr~~ 53 (64)
T 2xeu_A 22 LIVSTECG-HVFCSQCLRDSLKN------ANTCPTCRKK 53 (64)
T ss_dssp CEEEETTS-CEEEHHHHHHHHHH------CSBCTTTCCB
T ss_pred CEEeCCCC-CchhHHHHHHHHHc------CCCCCCCCcc
Confidence 34556788 58999999999753 4589999874
No 99
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=74.76 E-value=1.9 Score=37.64 Aligned_cols=49 Identities=31% Similarity=0.686 Sum_probs=34.7
Q ss_pred cCCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002251 191 TGGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (947)
Q Consensus 191 ~~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (947)
.....|.-|...-.+.++ -..|+ ..||..||..|+... ....||.||..
T Consensus 11 ~~~~~C~IC~~~~~~p~~-~~~Cg-H~fC~~Ci~~~~~~~----~~~~CP~Cr~~ 59 (92)
T 3ztg_A 11 PDELLCLICKDIMTDAVV-IPCCG-NSYCDECIRTALLES----DEHTCPTCHQN 59 (92)
T ss_dssp CTTTEETTTTEECSSCEE-CTTTC-CEECHHHHHHHHHHC----TTCCCTTTCCS
T ss_pred CcCCCCCCCChhhcCceE-CCCCC-CHHHHHHHHHHHHhc----CCCcCcCCCCc
Confidence 356789999876555443 33488 589999999997421 13689999864
No 100
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=74.33 E-value=1 Score=48.92 Aligned_cols=18 Identities=17% Similarity=0.414 Sum_probs=15.4
Q ss_pred eecCceEEecCCCccccc
Q 002251 831 QHLGEAVFIPAGCPFQVR 848 (947)
Q Consensus 831 Q~lGEAVFIPAGCPHQVR 848 (947)
=++|||+|||||.||=.-
T Consensus 162 l~pGd~~~ipaGt~HA~~ 179 (319)
T 1qwr_A 162 IKPGDFYYVPSGTLHALC 179 (319)
T ss_dssp CCTTCEEEECTTCCEEEC
T ss_pred cCCCCEEEcCCCCceEec
Confidence 358999999999999743
No 101
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=74.11 E-value=1.4 Score=39.63 Aligned_cols=48 Identities=25% Similarity=0.542 Sum_probs=33.4
Q ss_pred CCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002251 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (947)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (947)
....|--|...-...++ ..|+ ..||..||..|.... .....||.||..
T Consensus 20 ~~~~C~IC~~~~~~p~~--~~Cg-H~fC~~Ci~~~~~~~---~~~~~CP~Cr~~ 67 (112)
T 1jm7_A 20 KILECPICLELIKEPVS--TKCD-HIFCKFCMLKLLNQK---KGPSQCPLCKND 67 (112)
T ss_dssp HHTSCSSSCCCCSSCCB--CTTS-CCCCSHHHHHHHHSS---SSSCCCTTTSCC
T ss_pred CCCCCcccChhhcCeEE--CCCC-CHHHHHHHHHHHHhC---CCCCCCcCCCCc
Confidence 34578888765544333 4788 589999999998642 123589999864
No 102
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=73.90 E-value=1.8 Score=41.25 Aligned_cols=35 Identities=11% Similarity=-0.001 Sum_probs=25.7
Q ss_pred EEeecCceEEecCCCccccccccccceeeccccCC
Q 002251 829 FEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFP 863 (947)
Q Consensus 829 f~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSP 863 (947)
+.=..||+|+||+|.||+.+|....--+.+-++.|
T Consensus 89 ~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v~~~ 123 (147)
T 2f4p_A 89 RILKKGDVVEIPPNVVHWHGAAPDEELVHIGISTQ 123 (147)
T ss_dssp EEEETTCEEEECTTCCEEEEEBTTBCEEEEEEECC
T ss_pred EEECCCCEEEECCCCcEEeEeCCCCCEEEEEEEcc
Confidence 55679999999999999999986543333444443
No 103
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=73.81 E-value=2.1 Score=36.67 Aligned_cols=51 Identities=18% Similarity=0.340 Sum_probs=34.5
Q ss_pred cCCCCccccccCCCC--CeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002251 191 TGGQICHQCRRNDRE--RVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (947)
Q Consensus 191 ~~~~~CHQCrqkt~~--~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (947)
.....|--|...-.. ....-..|+ ..||..||..|.... .....||.||..
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~Cg-H~fC~~Ci~~~~~~~---~~~~~CP~Cr~~ 65 (88)
T 2ct2_A 13 REVLECPICMESFTEEQLRPKLLHCG-HTICRQCLEKLLASS---INGVRCPFCSKI 65 (88)
T ss_dssp CSCCBCTTTCCBCCTTSSCEEECSSS-CEEEHHHHHHHHHHC---SSCBCCTTTCCC
T ss_pred cCCCCCccCCccccccCCCeEECCCC-ChhhHHHHHHHHHcC---CCCcCCCCCCCc
Confidence 356778888865443 112334688 589999999997531 124689999875
No 104
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=73.39 E-value=1.1 Score=48.31 Aligned_cols=18 Identities=17% Similarity=0.191 Sum_probs=15.4
Q ss_pred eecCceEEecCCCccccc
Q 002251 831 QHLGEAVFIPAGCPFQVR 848 (947)
Q Consensus 831 Q~lGEAVFIPAGCPHQVR 848 (947)
=++|||+|||||.||=.-
T Consensus 162 l~pGd~~~ipaGt~HA~~ 179 (300)
T 1zx5_A 162 TTPYDTFVIRPGIPHAGE 179 (300)
T ss_dssp CCTTCEEEECTTCCEEEE
T ss_pred CCCCCEEEcCCCCceEcC
Confidence 368999999999999743
No 105
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=72.27 E-value=1.3 Score=41.20 Aligned_cols=31 Identities=16% Similarity=0.242 Sum_probs=25.6
Q ss_pred hCccceEEEeecCceEEecCCCccccccccc
Q 002251 822 FGVEPWSFEQHLGEAVFIPAGCPFQVRNLQS 852 (947)
Q Consensus 822 yGVepWtf~Q~lGEAVFIPAGCPHQVRNLkS 852 (947)
+.|..-++.=..||+++||+|.||+.+|...
T Consensus 91 ~~i~~~~~~l~~Gd~i~i~~~~~H~~~n~~~ 121 (133)
T 1o4t_A 91 FHDNGKDVPIKAGDVCFTDSGESHSIENTGN 121 (133)
T ss_dssp EEETTEEEEEETTEEEEECTTCEEEEECCSS
T ss_pred EEECCEEEEeCCCcEEEECCCCcEEeEECCC
Confidence 4455667777899999999999999999754
No 106
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=71.96 E-value=4 Score=34.96 Aligned_cols=49 Identities=22% Similarity=0.516 Sum_probs=36.1
Q ss_pred cCCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002251 191 TGGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (947)
Q Consensus 191 ~~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (947)
..+..|..|++. +.++.|-.|. ..|=..||.-.-..+. +-.|.||.|..
T Consensus 10 ~~~~~C~vC~~~--~~ll~Cd~C~-~~~H~~Cl~P~l~~~P--~g~W~C~~C~~ 58 (66)
T 2lri_C 10 APGARCGVCGDG--TDVLRCTHCA-AAFHWRCHFPAGTSRP--GTGLRCRSCSG 58 (66)
T ss_dssp CTTCCCTTTSCC--TTCEECSSSC-CEECHHHHCTTTCCCC--SSSCCCTTTTT
T ss_pred CCCCCcCCCCCC--CeEEECCCCC-CceecccCCCccCcCC--CCCEECccccC
Confidence 356679999864 4599999999 4899999964433322 23699999975
No 107
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=71.45 E-value=2.2 Score=39.21 Aligned_cols=44 Identities=27% Similarity=0.626 Sum_probs=33.0
Q ss_pred CCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002251 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (947)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (947)
...+|--|...-...++. ..|+ ..||..||..|.. ..||.||..
T Consensus 21 ~~~~C~IC~~~~~~pv~~-~~Cg-H~fC~~Ci~~~~~--------~~CP~Cr~~ 64 (117)
T 1jm7_B 21 KLLRCSRCTNILREPVCL-GGCE-HIFCSNCVSDCIG--------TGCPVCYTP 64 (117)
T ss_dssp HTTSCSSSCSCCSSCBCC-CSSS-CCBCTTTGGGGTT--------TBCSSSCCB
T ss_pred hCCCCCCCChHhhCccEe-CCCC-CHHHHHHHHHHhc--------CCCcCCCCc
Confidence 567888897655543332 2688 5899999999976 589999986
No 108
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=70.61 E-value=2.8 Score=34.30 Aligned_cols=46 Identities=22% Similarity=0.616 Sum_probs=29.9
Q ss_pred CCcccccc-C--CCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002251 194 QICHQCRR-N--DRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (947)
Q Consensus 194 ~~CHQCrq-k--t~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (947)
.+|--|.. . .....+.=..|+ ..||..||..|+.. ....||.||..
T Consensus 4 ~~C~IC~~~~~~~~~~~~~~~~Cg-H~fC~~Ci~~~~~~-----~~~~CP~Cr~~ 52 (65)
T 1g25_A 4 QGCPRCKTTKYRNPSLKLMVNVCG-HTLCESCVDLLFVR-----GAGNCPECGTP 52 (65)
T ss_dssp TCCSTTTTHHHHCSSCCEEECTTC-CCEEHHHHHHHHHT-----TSSSCTTTCCC
T ss_pred CcCCcCCCCccCCCccCeecCCCC-CHhHHHHHHHHHHc-----CCCcCCCCCCc
Confidence 46777776 1 222211224688 58999999999753 13589999874
No 109
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=70.42 E-value=1.5 Score=44.80 Aligned_cols=53 Identities=11% Similarity=0.045 Sum_probs=39.5
Q ss_pred cCCCcCcceecCHHHHHHHHHHhCccceEEEeecCceEEecCCCccccccccccceeec
Q 002251 800 THPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGL 858 (947)
Q Consensus 800 ~hPIHDQ~fYLd~~hk~rLkEEyGVepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAl 858 (947)
.|| +++.+|+-.-- =++.|.+=++.=..||.++||||.||-++|+..|+=+..
T Consensus 54 ~h~-~~~~~~Vl~G~-----~~~~i~~~~~~l~~Gd~~~~p~~~~H~~~a~~~~~~l~i 106 (227)
T 3rns_A 54 AML-GNRYYYCFNGN-----GEIFIENNKKTISNGDFLEITANHNYSIEARDNLKLIEI 106 (227)
T ss_dssp SCS-SCEEEEEEESE-----EEEEESSCEEEEETTEEEEECSSCCEEEEESSSEEEEEE
T ss_pred ccC-CCEEEEEEeCE-----EEEEECCEEEEECCCCEEEECCCCCEEEEECCCcEEEEE
Confidence 466 78888875541 234455656677889999999999999999988765544
No 110
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=70.08 E-value=1.4 Score=45.84 Aligned_cols=47 Identities=9% Similarity=0.065 Sum_probs=32.9
Q ss_pred CCCcCcceecCHHHHHHHHHHhCccceEEEeecCceEEecCCCccccccccc
Q 002251 801 HPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQS 852 (947)
Q Consensus 801 hPIHDQ~fYLd~~hk~rLkEEyGVepWtf~Q~lGEAVFIPAGCPHQVRNLkS 852 (947)
|+-.++-+|+-.-. -++.|..=++.=..||+||||+|+||+.+|.-.
T Consensus 197 H~~~~E~~~Vl~G~-----~~~~i~~~~~~l~~GD~i~~~~~~~H~~~n~g~ 243 (261)
T 1rc6_A 197 THVQEHGAYILSGQ-----GVYNLDNNWIPVKKGDYIFMGAYSLQAGYGVGR 243 (261)
T ss_dssp EESSCEEEEEEESE-----EEEESSSCEEEEETTCEEEECSSEEEEEEEC--
T ss_pred CCCceEEEEEEEeE-----EEEEECCEEEEeCCCCEEEECCCCcEEeEeCCC
Confidence 44445566664431 245566667788999999999999999999854
No 111
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=69.35 E-value=1.7 Score=35.31 Aligned_cols=45 Identities=24% Similarity=0.486 Sum_probs=32.5
Q ss_pred CCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCC
Q 002251 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPAC 242 (947)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~C 242 (947)
....|--|...-...++. .|+ ..||..||..|... ......||.|
T Consensus 19 ~~~~C~IC~~~~~~p~~~--~Cg-H~fC~~Ci~~~~~~---~~~~~~CP~C 63 (63)
T 2ysj_A 19 EEVICPICLDILQKPVTI--DCG-HNFCLKCITQIGET---SCGFFKCPLC 63 (63)
T ss_dssp CCCBCTTTCSBCSSCEEC--TTS-SEECHHHHHHHHHH---CSSCCCCSCC
T ss_pred cCCCCCcCCchhCCeEEe--CCC-CcchHHHHHHHHHc---CCCCCcCcCC
Confidence 567899998765554443 798 58999999999852 1234589988
No 112
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=69.33 E-value=3.3 Score=41.39 Aligned_cols=50 Identities=18% Similarity=0.442 Sum_probs=40.4
Q ss_pred CCCCccccccCCCCCeEEcc--cCCCccccHhHHhhhcCCCchhhh----hhcCCCCCC
Q 002251 192 GGQICHQCRRNDRERVVWCV--KCDKRGYCDSCISTWYSDIPLEEL----EKVCPACRG 244 (947)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~--~C~~~~FC~~CL~~rY~e~~~edv----~~~CP~Crg 244 (947)
....|.+|-... .++.|. +|.+ .||..||....|.-+.+++ .|.|=.|.-
T Consensus 78 ~~~yC~wC~~Gg--~l~~Cdn~~C~r-~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~P 133 (159)
T 3a1b_A 78 YQSYCTICCGGR--EVLMCGNNNCCR-CFCVECVDLLVGPGAAQAAIKEDPWNCYMCGH 133 (159)
T ss_dssp SBSSCTTTSCCS--EEEECSSTTTCC-EEEHHHHHHHTCTTHHHHHHTSSSCCCTTTCS
T ss_pred CcceeeEecCCC--eEEeeCCCCCCC-chhHHHHHHhcCHhHHHHHhccCCCEEEecCC
Confidence 456899999754 699999 6995 9999999999998666554 599988864
No 113
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=69.09 E-value=2 Score=45.47 Aligned_cols=50 Identities=16% Similarity=0.211 Sum_probs=37.2
Q ss_pred hCccceEEEeecCceEEecCCCccccccccccceeeccccCCCCHHHHHHH
Q 002251 822 FGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRL 872 (947)
Q Consensus 822 yGVepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~eC~rL 872 (947)
+.|..-++.=..||.|+||+|.||..+|...- -..+.+++|....+-+.-
T Consensus 80 ~~~~~~~~~l~~Gd~~~~p~~~~H~~~n~~~~-~~~~~~~~p~~~~~~~~~ 129 (337)
T 1y3t_A 80 LTLDGERYLLISGDYANIPAGTPHSYRMQSHR-TRLVSYTMKGNVAHLYSV 129 (337)
T ss_dssp EEETTEEEEECTTCEEEECTTCCEEEEECSTT-EEEEEEEETTSSTHHHHH
T ss_pred EEECCEEEEECCCCEEEECCCCcEEEEECCCC-eEEEEEECCCCHHHHHHH
Confidence 44456677788999999999999999999762 334556777777765433
No 114
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=68.95 E-value=2 Score=44.16 Aligned_cols=47 Identities=15% Similarity=0.116 Sum_probs=33.9
Q ss_pred cCCCcCcceecCHHHHHHHHHHhCccceEEEeecCceEE-ecCCCccccccccc
Q 002251 800 THPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVF-IPAGCPFQVRNLQS 852 (947)
Q Consensus 800 ~hPIHDQ~fYLd~~hk~rLkEEyGVepWtf~Q~lGEAVF-IPAGCPHQVRNLkS 852 (947)
.|| +.|-+|+-.-. =++-|..=++.=..||+|| ||+|.||+++|...
T Consensus 51 ~H~-~~e~~~Vl~G~-----~~~~~~~~~~~l~~Gd~i~~ip~~~~H~~~n~~~ 98 (243)
T 3h7j_A 51 QHK-EVQIGMVVSGE-----LMMTVGDVTRKMTALESAYIAPPHVPHGARNDTD 98 (243)
T ss_dssp CCS-SEEEEEEEESE-----EEEEETTEEEEEETTTCEEEECTTCCEEEEECSS
T ss_pred ECC-CcEEEEEEEeE-----EEEEECCEEEEECCCCEEEEcCCCCcEeeEeCCC
Confidence 466 66777765442 1234445566778999997 99999999999887
No 115
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=68.41 E-value=2.4 Score=40.27 Aligned_cols=35 Identities=23% Similarity=0.297 Sum_probs=28.2
Q ss_pred ccceEEEeecCceEEecCCCccccccccccceeec
Q 002251 824 VEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGL 858 (947)
Q Consensus 824 VepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAl 858 (947)
+.+=++.=..||++|||+|.||..+|...+.++.+
T Consensus 90 ~~g~~~~l~~GD~i~~p~g~~h~~~~~~~~~~l~v 124 (133)
T 2pyt_A 90 HEGETMIAKAGDVMFIPKGSSIEFGTPTSVRFLYV 124 (133)
T ss_dssp ETTEEEEEETTCEEEECTTCEEEEEEEEEEEEEEE
T ss_pred ECCEEEEECCCcEEEECCCCEEEEEeCCCEEEEEE
Confidence 34556677899999999999999999877766654
No 116
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=68.16 E-value=2.4 Score=41.04 Aligned_cols=50 Identities=20% Similarity=0.539 Sum_probs=37.4
Q ss_pred CCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchh-----hhhhcCCCCCC
Q 002251 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLE-----ELEKVCPACRG 244 (947)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~e-----dv~~~CP~Crg 244 (947)
....|..|... +.++-|..|-+ .||..||..-.+.-... +-.|.|+.|+-
T Consensus 56 ~~~~C~vC~dG--G~LlcCd~Cpr-~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~ 110 (129)
T 3ql9_A 56 MDEQCRWCAEG--GNLICCDFCHN-AFCKKCILRNLGRRELSTIMDENNQWYCYICHP 110 (129)
T ss_dssp CBSSCTTTCCC--SEEEECSSSSC-EEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCC
T ss_pred CCCcCeecCCC--CeeEecCCCch-hhhHHHhCCCcchhHHHHhccCCCCeEcCCcCC
Confidence 45679999854 45899999995 99999999876532222 33599999954
No 117
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=68.02 E-value=4.6 Score=39.65 Aligned_cols=49 Identities=22% Similarity=0.592 Sum_probs=37.2
Q ss_pred CCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCch-----hhhhhcCCCCC
Q 002251 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPL-----EELEKVCPACR 243 (947)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~-----edv~~~CP~Cr 243 (947)
....|-.|.... .++-|..|-+ .||..||..--+.-.. .+-.|.||.|+
T Consensus 62 ~~d~C~vC~~GG--~LlcCD~Cpr-~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~ 115 (142)
T 2lbm_A 62 MDEQCRWCAEGG--NLICCDFCHN-AFCKKCILRNLGRKELSTIMDENNQWYCYICH 115 (142)
T ss_dssp CBCSCSSSCCCS--SEEECSSSCC-EEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTC
T ss_pred CCCeecccCCCC--cEEeCCCCCC-eeeHhhcCCCCChhhhhhcccCCCCCEeeccc
Confidence 567899998655 4999999995 9999999876653122 23369999996
No 118
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=67.83 E-value=1.8 Score=48.62 Aligned_cols=16 Identities=38% Similarity=0.551 Sum_probs=14.7
Q ss_pred ecCceEEecCCCcccc
Q 002251 832 HLGEAVFIPAGCPFQV 847 (947)
Q Consensus 832 ~lGEAVFIPAGCPHQV 847 (947)
++|||+|||||.||=.
T Consensus 245 ~pGd~~fipAG~~HAy 260 (394)
T 2wfp_A 245 NPGEAMFLFAETPHAY 260 (394)
T ss_dssp CTTCEEEECTTCCEEE
T ss_pred CCCCEEEcCCCCceEc
Confidence 7899999999999973
No 119
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=67.58 E-value=1.9 Score=47.15 Aligned_cols=70 Identities=10% Similarity=0.025 Sum_probs=51.0
Q ss_pred cCCCcCcceecCHHHHHHHHHHhCccc-----eEEEeecCceEEecCCCccccccccccceeeccccCCCCHHHHHHHHH
Q 002251 800 THPLYGEVVYLNGDHKRKLKEEFGVEP-----WSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAE 874 (947)
Q Consensus 800 ~hPIHDQ~fYLd~~hk~rLkEEyGVep-----Wtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~eC~rLte 874 (947)
.|+-+++.||+-.-. =++-|.. -++.=..||.|+||+|.||..+|...-. ..+-+++|....+-|+-..
T Consensus 67 ~H~~~~E~~~Vl~G~-----~~~~v~~~~g~~~~~~L~~GD~v~ip~g~~H~~~n~~~~~-~~l~v~~p~~~~~~f~~l~ 140 (350)
T 1juh_A 67 IHQKHYENFYCNKGS-----FQLWAQSGNETQQTRVLSSGDYGSVPRNVTHTFQIQDPDT-EMTGVIVPGGFEDLFYYLG 140 (350)
T ss_dssp ECSSCEEEEEEEESE-----EEEEEEETTSCCEEEEEETTCEEEECTTEEEEEEECSTTE-EEEEEEESSCTTHHHHHHS
T ss_pred cCCCceEEEEEEEEE-----EEEEECCcCCceEEEEECCCCEEEECCCCcEEEEeCCCCC-EEEEEEcCccHHHHHHHhc
Confidence 466667777764432 1344555 7788899999999999999999987654 6677888988766655443
Q ss_pred H
Q 002251 875 E 875 (947)
Q Consensus 875 E 875 (947)
+
T Consensus 141 ~ 141 (350)
T 1juh_A 141 T 141 (350)
T ss_dssp E
T ss_pred c
Confidence 3
No 120
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=67.48 E-value=4 Score=37.12 Aligned_cols=53 Identities=21% Similarity=0.478 Sum_probs=42.5
Q ss_pred cCCCCccccccCCCCCeEEcccCCCccccHhHHhh-hcCCCc--h-------hhhhhcCCCCCC
Q 002251 191 TGGQICHQCRRNDRERVVWCVKCDKRGYCDSCIST-WYSDIP--L-------EELEKVCPACRG 244 (947)
Q Consensus 191 ~~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~-rY~e~~--~-------edv~~~CP~Crg 244 (947)
+.-.+|--|.+-+.+.+..|+.|+| .|=..||++ .|.... . -+.-|.||.|-.
T Consensus 13 ~~D~~C~VC~~~t~~~l~pCRvC~R-vfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~Cen 75 (89)
T 1wil_A 13 VNDEMCDVCEVWTAESLFPCRVCTR-VFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDN 75 (89)
T ss_dssp CCSCCCTTTCCCCSSCCSSCSSSSS-CCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCC
T ss_pred CCCcccCccccccccceeccccccc-cccHhhcccccccccHHHHHHHHccCCCCCccccccch
Confidence 3677999999999999999999995 899999999 587532 1 133599999954
No 121
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=67.00 E-value=2 Score=45.08 Aligned_cols=43 Identities=14% Similarity=0.227 Sum_probs=31.8
Q ss_pred CcceecCHHHHHHHHHHhCccceEEEeecCceEEecCCCccccccccc
Q 002251 805 GEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQS 852 (947)
Q Consensus 805 DQ~fYLd~~hk~rLkEEyGVepWtf~Q~lGEAVFIPAGCPHQVRNLkS 852 (947)
++-+|+-.-. -++.|..-++.=..||+|+||||+||+.+|...
T Consensus 204 ~E~~yVl~G~-----~~~~i~~~~~~l~~GD~i~i~~~~~H~~~n~~~ 246 (274)
T 1sef_A 204 EHGAYLISGQ-----GMYNLDNEWYPVEKGDYIFMSAYVPQAAYAVGR 246 (274)
T ss_dssp CEEEEEEECE-----EEEEETTEEEEEETTCEEEECTTCCEEEEEECS
T ss_pred eEEEEEEeCE-----EEEEECCEEEEECCCCEEEECCCCCEEEEeCCC
Confidence 4555554331 245566667888999999999999999999855
No 122
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=66.78 E-value=3.8 Score=37.32 Aligned_cols=46 Identities=24% Similarity=0.725 Sum_probs=31.8
Q ss_pred CCCCccccccCCC-----CCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002251 192 GGQICHQCRRNDR-----ERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (947)
Q Consensus 192 ~~~~CHQCrqkt~-----~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (947)
....|--|...-. ........|+ ..||..||..|... ...||.||.
T Consensus 71 ~~~~C~iC~~~~~~~~~~~~~~~~~~Cg-H~fc~~Ci~~~~~~------~~~CP~Cr~ 121 (133)
T 4ap4_A 71 GTVSCPICMDGYSEIVQNGRLIVSTECG-HVFCSQCLRDSLKN------ANTCPTCRK 121 (133)
T ss_dssp SSCBCTTTCCBHHHHHHTTCCEEEETTS-BEEEHHHHHHHHHH------CSBCTTTCC
T ss_pred CCCCCCCCCCccccccccCcceEeCCCC-ChhhHHHHHHHHHc------CCCCCCCCC
Confidence 4556777775322 2233555788 58999999999642 459999996
No 123
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=66.40 E-value=2 Score=38.95 Aligned_cols=37 Identities=22% Similarity=0.504 Sum_probs=25.5
Q ss_pred eEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002251 207 VVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (947)
Q Consensus 207 ~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (947)
++.-..|+ ..||..||..|... ........||.||..
T Consensus 55 ~~~~~~C~-H~Fh~~Ci~~wl~~-~~~~~~~~CP~CR~~ 91 (114)
T 1v87_A 55 VGRLTKCS-HAFHLLCLLAMYCN-GNKDGSLQCPSCKTI 91 (114)
T ss_dssp CEEESSSC-CEECHHHHHHHHHH-TCCSSCCBCTTTCCB
T ss_pred ceecCCCC-CcccHHHHHHHHHc-ccCCCCCcCCCCCCc
Confidence 44456788 58999999999721 001234689999974
No 124
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=66.25 E-value=4 Score=45.96 Aligned_cols=50 Identities=20% Similarity=0.531 Sum_probs=40.3
Q ss_pred CCCCccccccCCCCCeEEcc--cCCCccccHhHHhhhcCCCchhhh----hhcCCCCCC
Q 002251 192 GGQICHQCRRNDRERVVWCV--KCDKRGYCDSCISTWYSDIPLEEL----EKVCPACRG 244 (947)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~--~C~~~~FC~~CL~~rY~e~~~edv----~~~CP~Crg 244 (947)
....|.+|-... .++.|. +|.+ .||..||....+.-..+.+ .|.|=.|.-
T Consensus 92 ~~~yCr~C~~Gg--~l~~Cdn~~C~r-~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p 147 (386)
T 2pv0_B 92 YQSYCSICCSGE--TLLICGNPDCTR-CYCFECVDSLVGPGTSGKVHAMSNWVCYLCLP 147 (386)
T ss_dssp SBCSCTTTCCCS--SCEECCSTTCCC-EECHHHHHHHTCTTHHHHHHHCSSCCCTTTSS
T ss_pred CcccceEcCCCC--eEEEeCCCCCCc-chHHHHHHHhcChhHHHHhhccCCceEEEcCC
Confidence 466899998754 599999 7994 9999999999987655554 599988874
No 125
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=66.02 E-value=5 Score=33.56 Aligned_cols=49 Identities=22% Similarity=0.649 Sum_probs=37.3
Q ss_pred cCCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002251 191 TGGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (947)
Q Consensus 191 ~~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (947)
.....|..|++. +.++.|-.|.+ .|=..||.---.++. .-.|.||.|..
T Consensus 9 ~~~~~C~vC~~~--g~ll~CD~C~~-~fH~~Cl~p~l~~~p--~g~W~C~~C~~ 57 (61)
T 2l5u_A 9 DHQDYCEVCQQG--GEIILCDTCPR-AYHMVCLDPDMEKAP--EGKWSCPHCEK 57 (61)
T ss_dssp CCCSSCTTTSCC--SSEEECSSSSC-EEEHHHHCTTCCSCC--CSSCCCTTGGG
T ss_pred CCCCCCccCCCC--CcEEECCCCCh-hhhhhccCCCCCCCC--CCceECccccc
Confidence 467789999874 57999999995 899999975433322 24799999963
No 126
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=65.73 E-value=2.6 Score=38.49 Aligned_cols=46 Identities=24% Similarity=0.584 Sum_probs=33.7
Q ss_pred CCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002251 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (947)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (947)
....|--|...-...++ ..|+ ..||..||..|.... ...||.||..
T Consensus 22 ~~~~C~IC~~~~~~p~~--~~Cg-H~fC~~Ci~~~~~~~-----~~~CP~Cr~~ 67 (116)
T 1rmd_A 22 KSISCQICEHILADPVE--TSCK-HLFCRICILRCLKVM-----GSYCPSCRYP 67 (116)
T ss_dssp HHTBCTTTCSBCSSEEE--CTTS-CEEEHHHHHHHHHHT-----CSBCTTTCCB
T ss_pred CCCCCCCCCcHhcCcEE--cCCC-CcccHHHHHHHHhHC-----cCcCCCCCCC
Confidence 45678888766554444 5799 589999999997531 3479999873
No 127
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=65.54 E-value=2.1 Score=48.80 Aligned_cols=16 Identities=38% Similarity=0.557 Sum_probs=14.7
Q ss_pred eecCceEEecCCCccc
Q 002251 831 QHLGEAVFIPAGCPFQ 846 (947)
Q Consensus 831 Q~lGEAVFIPAGCPHQ 846 (947)
=++|||+|||||.||=
T Consensus 270 L~pGea~flpAg~~HA 285 (440)
T 1pmi_A 270 LNKGEAMFLQAKDPHA 285 (440)
T ss_dssp ECTTCEEEECTTCCEE
T ss_pred cCCCCEEecCCCCccc
Confidence 4689999999999997
No 128
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=64.92 E-value=4.5 Score=36.91 Aligned_cols=47 Identities=21% Similarity=0.446 Sum_probs=32.5
Q ss_pred CCCCccccccCC-CCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCC
Q 002251 192 GGQICHQCRRND-RERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACR 243 (947)
Q Consensus 192 ~~~~CHQCrqkt-~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Cr 243 (947)
....| .|++.. .+.++.|-.|.+ -|=..|+.--..... -.|.||.|+
T Consensus 27 d~vrC-iC~~~~~~~~mi~Cd~C~~-w~H~~C~~~~~~~~p---~~w~C~~C~ 74 (98)
T 2lv9_A 27 DVTRC-ICGFTHDDGYMICCDKCSV-WQHIDCMGIDRQHIP---DTYLCERCQ 74 (98)
T ss_dssp CBCCC-TTSCCSCSSCEEEBTTTCB-EEETTTTTCCTTSCC---SSBCCTTTS
T ss_pred CCEEe-ECCCccCCCcEEEcCCCCC-cCcCcCCCCCccCCC---CCEECCCCc
Confidence 34568 588765 457999999994 777788754322221 169999996
No 129
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=64.43 E-value=3.3 Score=41.39 Aligned_cols=30 Identities=23% Similarity=0.177 Sum_probs=25.4
Q ss_pred CccceEEEeecCceEEecCCCccccccccc
Q 002251 823 GVEPWSFEQHLGEAVFIPAGCPFQVRNLQS 852 (947)
Q Consensus 823 GVepWtf~Q~lGEAVFIPAGCPHQVRNLkS 852 (947)
-|..=+|.=..||.++||||.||..+|.-+
T Consensus 124 tl~g~~~~L~~Gds~~iP~g~~H~~~N~~d 153 (166)
T 2vpv_A 124 TVCKNKFLSVKGSTFQIPAFNEYAIANRGN 153 (166)
T ss_dssp EETTEEEEEETTCEEEECTTCEEEEEECSS
T ss_pred EECCEEEEEcCCCEEEECCCCCEEEEECCC
Confidence 344567778899999999999999999765
No 130
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=64.34 E-value=2.2 Score=45.56 Aligned_cols=30 Identities=10% Similarity=0.201 Sum_probs=23.0
Q ss_pred hCccceEEEeecCceEEecCCCcccccccc
Q 002251 822 FGVEPWSFEQHLGEAVFIPAGCPFQVRNLQ 851 (947)
Q Consensus 822 yGVepWtf~Q~lGEAVFIPAGCPHQVRNLk 851 (947)
|.+..=.++=..||++|||+||||+..|.-
T Consensus 220 y~l~~~~~~V~~GD~i~~~~~~~h~~~n~G 249 (266)
T 4e2q_A 220 YRLGDNWYPVQAGDVIWMAPFVPQWYAALG 249 (266)
T ss_dssp EEETTEEEEEETTCEEEECTTCCEEEEEES
T ss_pred EEECCEEEEecCCCEEEECCCCcEEEEeCC
Confidence 334444455568999999999999999863
No 131
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=64.33 E-value=4 Score=47.18 Aligned_cols=42 Identities=17% Similarity=0.237 Sum_probs=34.6
Q ss_pred hCccceEEEeecCceEEecCCCccccccccc--cceeeccccCC
Q 002251 822 FGVEPWSFEQHLGEAVFIPAGCPFQVRNLQS--TVQLGLDFLFP 863 (947)
Q Consensus 822 yGVepWtf~Q~lGEAVFIPAGCPHQVRNLkS--CIKVAlDFVSP 863 (947)
.+-..+.++-.+||..|||.|.+|||+++-. +|.++.-+-.+
T Consensus 223 ~~~p~~e~~L~pGDvLYiP~g~~H~~~s~~~~~SlhlTi~~~~~ 266 (489)
T 4diq_A 223 LGEPVLQTVLEPGDLLYFPRGFIHQAECQDGVHSLHLTLSTYQR 266 (489)
T ss_dssp CCCCSEEEEECTTCEEEECTTCEEEEEBCSSCCEEEEEEEECTT
T ss_pred ccCcceEEEECCCCEEEECCCCceEEEecCCCceEEEeecccCc
Confidence 3556789999999999999999999999954 67777766544
No 132
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=63.71 E-value=4.1 Score=46.41 Aligned_cols=31 Identities=19% Similarity=0.342 Sum_probs=27.8
Q ss_pred HhCccceEEEeecCceEEecCCCcccccccc
Q 002251 821 EFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQ 851 (947)
Q Consensus 821 EyGVepWtf~Q~lGEAVFIPAGCPHQVRNLk 851 (947)
++|...+.++=.+||+.|||+|.+|+|+.+-
T Consensus 193 ~~~~~~~~~~L~pGD~LYiP~g~~H~~~s~~ 223 (442)
T 2xdv_A 193 RIGRPVHEFMLKPGDLLYFPRGTIHQADTPA 223 (442)
T ss_dssp TSCSCSEEEEECTTCEEEECTTCEEEEECCS
T ss_pred hcCCcceEEEECCCcEEEECCCceEEEEecC
Confidence 3566778999999999999999999999986
No 133
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=63.25 E-value=4.5 Score=43.56 Aligned_cols=53 Identities=13% Similarity=0.157 Sum_probs=35.7
Q ss_pred EEEeecCceEEecCCCccccccccccceeeccccCCCCHHHHHHHHHHHhcCCC
Q 002251 828 SFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPN 881 (947)
Q Consensus 828 tf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~eC~rLteEfR~Lp~ 881 (947)
++.=..||+++||+|+||+++|..+--=+.+-|++|.+... +.|++=++.+|.
T Consensus 279 ~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~ 331 (361)
T 2vqa_A 279 VSRLQQGDVGYVPKGYGHAIRNSSQKPLDIVVVFNDGDYQS-IDLSTWLASNPS 331 (361)
T ss_dssp EEEECTTCEEEECTTCEEEEECCSSSCEEEEEEESSSSCCC-EEHHHHHHTSCH
T ss_pred EEEECCCCEEEECCCCeEEeEECCCCCEEEEEEECCCCcce-eeHHHHhhhCCH
Confidence 56667899999999999999998653334455556654222 234455777765
No 134
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=63.21 E-value=3.4 Score=45.37 Aligned_cols=40 Identities=18% Similarity=-0.020 Sum_probs=30.4
Q ss_pred ccceEEEeecCceEEecCCCccccccccccceeeccccCC
Q 002251 824 VEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFP 863 (947)
Q Consensus 824 VepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSP 863 (947)
|.+=++.=..||+|+||+|.+|+.+|...---+-++|..|
T Consensus 136 v~g~~~~l~~GD~~~iP~g~~H~~~n~~~~~~~~l~v~d~ 175 (354)
T 2d40_A 136 VDGERTPMNEGDFILTPQWRWHDHGNPGDEPVIWLDGLDL 175 (354)
T ss_dssp ETTEEEECCTTCEEEECTTSCEEEECCSSSCEEEEEEECH
T ss_pred ECCEEEEEcCCCEEEECCCCcEEeEeCCCCCEEEEEEECc
Confidence 4556788889999999999999999986532344566554
No 135
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=62.74 E-value=3.8 Score=35.78 Aligned_cols=48 Identities=25% Similarity=0.572 Sum_probs=31.6
Q ss_pred CCCCccccccCCC--C-CeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCCcc
Q 002251 192 GGQICHQCRRNDR--E-RVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGSC 246 (947)
Q Consensus 192 ~~~~CHQCrqkt~--~-~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg~C 246 (947)
...+|-=|...-. + ....| .|+ ..||..||.+...+ ....||.||..-
T Consensus 10 ~~~~CpICle~~~~~d~~~~p~-~CG-H~fC~~Cl~~~~~~-----~~~~CP~CR~~~ 60 (78)
T 1e4u_A 10 DPVECPLCMEPLEIDDINFFPC-TCG-YQICRFCWHRIRTD-----ENGLCPACRKPY 60 (78)
T ss_dssp CCCBCTTTCCBCCTTTTTCCSS-TTS-CCCCHHHHHHHTTS-----SCSBCTTTCCBC
T ss_pred cCCcCCccCccCcccccccccc-CCC-CCcCHHHHHHHHhc-----CCCCCCCCCCcc
Confidence 4556777776331 1 22334 588 58999999987643 246899999754
No 136
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=62.41 E-value=2.5 Score=38.93 Aligned_cols=45 Identities=27% Similarity=0.533 Sum_probs=32.1
Q ss_pred CCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002251 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (947)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (947)
....|--|...-...++ ..|+ -.||..||..|... ....||.||.
T Consensus 17 ~~~~C~IC~~~~~~p~~--~~Cg-H~fC~~Ci~~~~~~-----~~~~CP~Cr~ 61 (118)
T 3hct_A 17 SKYECPICLMALREAVQ--TPCG-HRFCKACIIKSIRD-----AGHKCPVDNE 61 (118)
T ss_dssp GGGBCTTTCSBCSSEEE--CTTS-CEEEHHHHHHHHHH-----HCSBCTTTCC
T ss_pred CCCCCCcCChhhcCeEE--CCcC-ChhhHHHHHHHHhh-----CCCCCCCCCC
Confidence 45678888866555433 3699 58999999998742 1238999985
No 137
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=61.18 E-value=6.3 Score=34.24 Aligned_cols=42 Identities=24% Similarity=0.739 Sum_probs=30.0
Q ss_pred CCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002251 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (947)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (947)
....|--|.....+.+. ..|+...||..|+..+ +.||.||..
T Consensus 17 ~~~~C~IC~~~~~~~v~--~pCgH~~~C~~C~~~~----------~~CP~Cr~~ 58 (79)
T 2yho_A 17 EAMLCMVCCEEEINSTF--CPCGHTVCCESCAAQL----------QSCPVCRSR 58 (79)
T ss_dssp HHTBCTTTSSSBCCEEE--ETTCBCCBCHHHHTTC----------SBCTTTCCB
T ss_pred CCCEeEEeCcccCcEEE--ECCCCHHHHHHHHHhc----------CcCCCCCch
Confidence 34578888876665333 3577544999999865 399999973
No 138
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=60.97 E-value=3.7 Score=33.10 Aligned_cols=42 Identities=21% Similarity=0.593 Sum_probs=29.1
Q ss_pred CCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002251 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (947)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (947)
...+|--|...-...+ -..|+ ..||..||..+ ...||.||..
T Consensus 5 ~~~~C~IC~~~~~~p~--~l~Cg-H~fC~~Ci~~~---------~~~CP~Cr~~ 46 (56)
T 1bor_A 5 QFLRCQQCQAEAKCPK--LLPCL-HTLCSGCLEAS---------GMQCPICQAP 46 (56)
T ss_dssp CCSSCSSSCSSCBCCS--CSTTS-CCSBTTTCSSS---------SSSCSSCCSS
T ss_pred cCCCceEeCCccCCeE--EcCCC-CcccHHHHccC---------CCCCCcCCcE
Confidence 4567888876554432 24577 58999999772 4579999864
No 139
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=60.72 E-value=2.9 Score=44.36 Aligned_cols=43 Identities=21% Similarity=0.386 Sum_probs=31.1
Q ss_pred CcceecCHHHHHHHHHHhCccceEEEeecCceEEecCCCccccccccc
Q 002251 805 GEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQS 852 (947)
Q Consensus 805 DQ~fYLd~~hk~rLkEEyGVepWtf~Q~lGEAVFIPAGCPHQVRNLkS 852 (947)
++.+|+-.-. -++.|..=++.=..||+++||+|.||+++|.-+
T Consensus 91 eE~~~Vl~G~-----l~v~v~g~~~~L~~GD~i~ip~~~~H~~~N~g~ 133 (278)
T 1sq4_A 91 EAVLFVVEGE-----LSLTLQGQVHAMQPGGYAFIPPGADYKVRNTTG 133 (278)
T ss_dssp EEEEEEEESC-----EEEEESSCEEEECTTEEEEECTTCCEEEECCSS
T ss_pred eEEEEEEeCE-----EEEEECCEEEEECCCCEEEECCCCcEEEEECCC
Confidence 5556654331 134445567788899999999999999999843
No 140
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=60.15 E-value=4.6 Score=36.77 Aligned_cols=46 Identities=22% Similarity=0.672 Sum_probs=31.7
Q ss_pred CCCccccccCCC-----CCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002251 193 GQICHQCRRNDR-----ERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (947)
Q Consensus 193 ~~~CHQCrqkt~-----~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (947)
...|--|...-. +..+.-..|+ -.||..||..|.... ..||.||..
T Consensus 7 ~~~C~IC~~~~~~~~~~~~~~~~~~Cg-H~fc~~Ci~~~~~~~------~~CP~Cr~~ 57 (133)
T 4ap4_A 7 TVSCPICMDGYSEIVQNGRLIVSTECG-HVFCSQCLRDSLKNA------NTCPTCRKK 57 (133)
T ss_dssp SCBCTTTCCBHHHHHHTTCCEEEETTC-CEEEHHHHHHHHTTC------SBCTTTCCB
T ss_pred CCCCcccChhhhCccccccCeEecCCC-ChhhHHHHHHHHHhC------CCCCCCCCc
Confidence 456777765432 2333555788 589999999998652 389998863
No 141
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=60.08 E-value=3.6 Score=40.98 Aligned_cols=48 Identities=27% Similarity=0.633 Sum_probs=35.2
Q ss_pred CCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002251 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (947)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (947)
+...|..|++. +.++.|-.|.+ .|-..|+..-..... .-.|.||.|+.
T Consensus 3 ~~~~C~~C~~~--g~ll~Cd~C~~-~~H~~C~~p~l~~~p--~~~W~C~~C~~ 50 (184)
T 3o36_A 3 NEDWCAVCQNG--GELLCCEKCPK-VFHLSCHVPTLTNFP--SGEWICTFCRD 50 (184)
T ss_dssp SCSSCTTTCCC--SSCEECSSSSC-EECTTTSSSCCSSCC--SSCCCCTTTSC
T ss_pred CCCccccCCCC--CeeeecCCCCc-ccCccccCCCCCCCC--CCCEECccccC
Confidence 34679999865 45999999994 899999855433322 23699999986
No 142
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=58.92 E-value=6.7 Score=33.25 Aligned_cols=42 Identities=24% Similarity=0.612 Sum_probs=29.1
Q ss_pred CCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002251 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (947)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (947)
....|--|...-...++ ..|+...||..|+.+. ..||.||..
T Consensus 24 ~~~~C~IC~~~~~~~~~--~pCgH~~~C~~C~~~~----------~~CP~Cr~~ 65 (75)
T 2ecg_A 24 EEKLCKICMDRNIAIVF--VPCGHLVTCKQCAEAV----------DKCPMCYTV 65 (75)
T ss_dssp HHHSCSSSCSSCCCBCC--SSSCCCCBCHHHHHHC----------SBCTTTCCB
T ss_pred CCCCCCcCCCCCCCEEE--ecCCCHHHHHHHhhCC----------CCCccCCce
Confidence 45578889876654332 4688533999999542 689999963
No 143
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=58.76 E-value=7.2 Score=35.43 Aligned_cols=49 Identities=24% Similarity=0.603 Sum_probs=36.9
Q ss_pred cCCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002251 191 TGGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (947)
Q Consensus 191 ~~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (947)
.....|..|++.. .++.|-.|.+ .|=..||..-..++. +-.|.||.|+.
T Consensus 23 ~n~~~C~vC~~~g--~LL~CD~C~~-~fH~~Cl~PpL~~~P--~g~W~C~~C~~ 71 (88)
T 1fp0_A 23 DSATICRVCQKPG--DLVMCNQCEF-CFHLDCHLPALQDVP--GEEWSCSLCHV 71 (88)
T ss_dssp SSSSCCSSSCSSS--CCEECTTSSC-EECTTSSSTTCCCCC--SSSCCCCSCCC
T ss_pred CCCCcCcCcCCCC--CEEECCCCCC-ceecccCCCCCCCCc--CCCcCCccccC
Confidence 4677899999764 6999999995 788888855443332 23799999975
No 144
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=58.61 E-value=3.7 Score=41.72 Aligned_cols=50 Identities=22% Similarity=0.552 Sum_probs=36.6
Q ss_pred cCCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002251 191 TGGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (947)
Q Consensus 191 ~~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (947)
.....|..|++.. .++.|-.|.+ .|-..||..-..... .-.|.||.|+..
T Consensus 5 ~~~~~C~~C~~~g--~ll~Cd~C~~-~~H~~Cl~p~l~~~p--~~~W~C~~C~~~ 54 (207)
T 3u5n_A 5 PNEDWCAVCQNGG--DLLCCEKCPK-VFHLTCHVPTLLSFP--SGDWICTFCRDI 54 (207)
T ss_dssp SSCSSBTTTCCCE--EEEECSSSSC-EECTTTSSSCCSSCC--SSCCCCTTTSCS
T ss_pred CCCCCCCCCCCCC--ceEEcCCCCC-ccCCccCCCCCCCCC--CCCEEeCceeCc
Confidence 4567799998654 5999999994 899999864333322 236999999863
No 145
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=58.50 E-value=4.4 Score=45.25 Aligned_cols=29 Identities=17% Similarity=0.158 Sum_probs=24.9
Q ss_pred ccceEEEeecCceEEecCCCccccccccc
Q 002251 824 VEPWSFEQHLGEAVFIPAGCPFQVRNLQS 852 (947)
Q Consensus 824 VepWtf~Q~lGEAVFIPAGCPHQVRNLkS 852 (947)
|.+=+|.=..||+||||+|+.|++.|--+
T Consensus 139 vdG~~~~~~~GD~v~iP~g~~H~~~N~gd 167 (368)
T 3nw4_A 139 VNGDPVRMSRGDLLLTPGWCFHGHMNDTD 167 (368)
T ss_dssp ETTEEEEEETTCEEEECTTCCEEEEECSS
T ss_pred ECCEEEEEeCCCEEEECCCCcEEeEeCCC
Confidence 45667888999999999999999999643
No 146
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=58.46 E-value=4.3 Score=45.69 Aligned_cols=29 Identities=21% Similarity=0.035 Sum_probs=25.9
Q ss_pred CccceEEEeecCceEEecCCCcccccccc
Q 002251 823 GVEPWSFEQHLGEAVFIPAGCPFQVRNLQ 851 (947)
Q Consensus 823 GVepWtf~Q~lGEAVFIPAGCPHQVRNLk 851 (947)
-|.+-+|.-..||+||||+|.+||+.|.-
T Consensus 328 ~V~ge~~~~~~GD~~~iP~g~~H~~~N~g 356 (394)
T 3bu7_A 328 IVGGKRFDWSEHDIFCVPAWTWHEHCNTQ 356 (394)
T ss_dssp EETTEEEEECTTCEEEECTTCCEEEEECC
T ss_pred EECCEEEEEeCCCEEEECCCCeEEeEeCC
Confidence 45678899999999999999999999974
No 147
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=58.14 E-value=2.1 Score=41.25 Aligned_cols=45 Identities=27% Similarity=0.659 Sum_probs=32.9
Q ss_pred CCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002251 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (947)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (947)
....|--|..--...++ +.|+ -.||..||..|... ....||.||.
T Consensus 30 ~~~~C~IC~~~~~~pv~--~~Cg-H~FC~~Ci~~~~~~-----~~~~CP~Cr~ 74 (141)
T 3knv_A 30 AKYLCSACRNVLRRPFQ--AQCG-HRYCSFCLASILSS-----GPQNCAACVH 74 (141)
T ss_dssp GGGBCTTTCSBCSSEEE--CTTS-CEEEHHHHHHHGGG-----SCEECHHHHH
T ss_pred cCcCCCCCChhhcCcEE--CCCC-CccCHHHHHHHHhc-----CCCCCCCCCC
Confidence 55689999876655543 4899 58999999999742 1247888775
No 148
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=57.04 E-value=4.8 Score=39.73 Aligned_cols=27 Identities=30% Similarity=0.474 Sum_probs=23.2
Q ss_pred ceEEEeecCceEEecCCCccccccccc
Q 002251 826 PWSFEQHLGEAVFIPAGCPFQVRNLQS 852 (947)
Q Consensus 826 pWtf~Q~lGEAVFIPAGCPHQVRNLkS 852 (947)
.-++.=..||+++||+|.||..+|.-.
T Consensus 82 ~~~~~l~~GDv~~~P~g~~H~~~N~g~ 108 (178)
T 1dgw_A 82 RDTYKLDQGDAIKIQAGTPFYLINPDN 108 (178)
T ss_dssp EEEEEEETTEEEEECTTCCEEEEECCS
T ss_pred cEEEEECCCCEEEECCCCeEEEEeCCC
Confidence 446677889999999999999999854
No 149
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=56.12 E-value=7.7 Score=39.06 Aligned_cols=25 Identities=12% Similarity=0.072 Sum_probs=21.5
Q ss_pred EEEeecCceEEecCCCccccccccc
Q 002251 828 SFEQHLGEAVFIPAGCPFQVRNLQS 852 (947)
Q Consensus 828 tf~Q~lGEAVFIPAGCPHQVRNLkS 852 (947)
.+.=..||.|+||||.||...+-..
T Consensus 123 ~~~l~~GDli~IP~g~~H~~~~~~~ 147 (179)
T 1zrr_A 123 QVLCEKNDLISVPAHTPHWFDMGSE 147 (179)
T ss_dssp EEECCCSCEEEECTTCCBCCCCSSC
T ss_pred EEEECCCCEEEECCCCeEeeecCCC
Confidence 4556899999999999999887665
No 150
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=56.11 E-value=4.3 Score=37.50 Aligned_cols=29 Identities=28% Similarity=0.637 Sum_probs=23.0
Q ss_pred EcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002251 209 WCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (947)
Q Consensus 209 ~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (947)
.-..|+ ..|+..||..|... ...||.||.
T Consensus 69 ~~~~C~-H~FH~~Ci~~Wl~~------~~~CP~Cr~ 97 (106)
T 3dpl_R 69 AWGVCN-HAFHFHCISRWLKT------RQVCPLDNR 97 (106)
T ss_dssp EEETTS-CEEEHHHHHHHHTT------CSBCSSSCS
T ss_pred eecccC-cEECHHHHHHHHHc------CCcCcCCCC
Confidence 334688 58999999999764 358999986
No 151
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=55.96 E-value=5.9 Score=40.49 Aligned_cols=37 Identities=14% Similarity=0.218 Sum_probs=27.3
Q ss_pred EEEeecCceEEecCCCccccccccccceeeccccCCC
Q 002251 828 SFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPE 864 (947)
Q Consensus 828 tf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 864 (947)
++.=..||.|+||||.||...+-..--=+|+.|-+++
T Consensus 128 ~i~v~~GDlIiIPaG~~H~f~~~~~~~~~airlF~~~ 164 (191)
T 1vr3_A 128 RISMEKGDMITLPAGIYHRFTLDEKNYVKAMRLFVGE 164 (191)
T ss_dssp EEEEETTEEEEECTTCCEEEEECTTCCEEEEEEESSS
T ss_pred EEEECCCCEEEECcCCcCCcccCCCCCEEEEEEECCC
Confidence 6777899999999999999887655333455555544
No 152
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=55.77 E-value=6.7 Score=42.71 Aligned_cols=55 Identities=18% Similarity=0.326 Sum_probs=33.6
Q ss_pred ceEEEeecCceEEecCCCccccccccccceeeccccCCCCHHHHHHHHHHHhcCCC
Q 002251 826 PWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPN 881 (947)
Q Consensus 826 pWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~eC~rLteEfR~Lp~ 881 (947)
.-++.=..||+++||+|.||+++|..+--=+.+-++.|..... +.+.+-++.+|.
T Consensus 300 ~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~v~~~~~~~d-~~~~~~l~~~~~ 354 (385)
T 1j58_A 300 ARTFNYQAGDVGYVPFAMGHYVENIGDEPLVFLEIFKDDHYAD-VSLNQWLAMLPE 354 (385)
T ss_dssp EEEEEEESSCEEEECTTCBEEEEECSSSCEEEEEEESSSSCCC-EEHHHHHHTSCH
T ss_pred EEEEEEcCCCEEEECCCCeEEEEECCCCCEEEEEEECCCCccc-cCHHHHHHhCCH
Confidence 3456677999999999999999998643223334444432111 123444555553
No 153
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=55.74 E-value=8.3 Score=34.90 Aligned_cols=45 Identities=13% Similarity=0.025 Sum_probs=34.5
Q ss_pred CCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002251 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (947)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (947)
...+|-=|..--.+.++ ..|+...||..||..|..+ ...||+|+.
T Consensus 21 ~~~~CpI~~~~m~dPV~--~~cG~htf~r~cI~~~l~~------~~~cP~~~~ 65 (98)
T 1wgm_A 21 DEFLDPIMSTLMCDPVV--LPSSRVTVDRSTIARHLLS------DQTDPFNRS 65 (98)
T ss_dssp TTTBCTTTCSBCSSEEE--CTTTCCEEEHHHHHHHTTT------SCBCTTTCS
T ss_pred HhcCCcCccccccCCeE--CCCCCeEECHHHHHHHHHh------CCCCCCCCC
Confidence 56788888877666555 4677458999999999874 258999985
No 154
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=54.85 E-value=8 Score=34.04 Aligned_cols=48 Identities=25% Similarity=0.646 Sum_probs=31.9
Q ss_pred CccccccCC-CCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002251 195 ICHQCRRND-RERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (947)
Q Consensus 195 ~CHQCrqkt-~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (947)
.|..|.+.. .+.++.|-.|.+ .|=..||.---..+. +...|.||.|..
T Consensus 28 ~C~vC~~~~~~~~ll~CD~C~~-~yH~~Cl~Ppl~~~P-~g~~W~C~~C~~ 76 (77)
T 2e6s_A 28 SCRVCGGKHEPNMQLLCDECNV-AYHIYCLNPPLDKVP-EEEYWYCPSCKT 76 (77)
T ss_dssp SCSSSCCCCCSTTEEECSSSCC-EEETTSSSSCCSSCC-CSSCCCCTTTCC
T ss_pred CCcCcCCcCCCCCEEEcCCCCc-cccccccCCCccCCC-CCCCcCCcCccC
Confidence 667777764 457888888884 677777753322222 223799999974
No 155
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=54.41 E-value=4.6 Score=45.45 Aligned_cols=46 Identities=33% Similarity=0.786 Sum_probs=33.3
Q ss_pred CCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCCcc
Q 002251 193 GQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGSC 246 (947)
Q Consensus 193 ~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg~C 246 (947)
...|.-|...-.. .....|+ ..||..||..|... ....||.||...
T Consensus 332 ~~~C~ICle~~~~--pv~lpCG-H~FC~~Ci~~wl~~-----~~~~CP~CR~~i 377 (389)
T 2y1n_A 332 FQLCKICAENDKD--VKIEPCG-HLMCTSCLTSWQES-----EGQGCPFCRCEI 377 (389)
T ss_dssp SSBCTTTSSSBCC--EEEETTC-CEECHHHHHHHHHH-----TCSBCTTTCCBC
T ss_pred CCCCCccCcCCCC--eEEeCCC-ChhhHHHHHHHHhc-----CCCCCCCCCCcc
Confidence 3689999876654 3445788 47999999988641 235899999743
No 156
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=54.29 E-value=9.8 Score=32.88 Aligned_cols=35 Identities=23% Similarity=0.576 Sum_probs=27.5
Q ss_pred cCCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCC
Q 002251 191 TGGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDI 230 (947)
Q Consensus 191 ~~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~ 230 (947)
.....|..|+++.--....| .|+ +.||. .-||++.
T Consensus 13 ~~~~rC~~C~kkvgl~~f~C-rCg-~~FC~---~HR~~e~ 47 (64)
T 1wg2_A 13 RPNNRCFSCNKKVGVMGFKC-KCG-STFCG---SHRYPEK 47 (64)
T ss_dssp CCSCSCTTTCCCCTTSCEEC-TTS-CEECS---SSCSSTT
T ss_pred CcCCcChhhCCcccccCeEe-ecC-CEecc---cCCCccc
Confidence 56789999999854446899 799 58986 6789874
No 157
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=53.92 E-value=4.3 Score=41.97 Aligned_cols=31 Identities=16% Similarity=0.127 Sum_probs=25.0
Q ss_pred CccceEEEeecCceEEecCCCcccccccccc
Q 002251 823 GVEPWSFEQHLGEAVFIPAGCPFQVRNLQST 853 (947)
Q Consensus 823 GVepWtf~Q~lGEAVFIPAGCPHQVRNLkSC 853 (947)
.|..=++.=..||+++||||.||+++|...+
T Consensus 82 ~~~~~~~~l~~Gd~~~~p~~~~H~~~n~~~~ 112 (246)
T 1sfn_A 82 AVGGETRTLREYDYVYLPAGEKHMLTAKTDA 112 (246)
T ss_dssp ECSSCEEEECTTEEEEECTTCCCEEEEEEEE
T ss_pred EECCEEEEECCCCEEEECCCCCEEEEeCCCE
Confidence 3445566778899999999999999998544
No 158
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=53.88 E-value=5.6 Score=45.95 Aligned_cols=33 Identities=21% Similarity=0.429 Sum_probs=25.7
Q ss_pred ecCceEEecCCCccccccccccceeeccccCCC
Q 002251 832 HLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPE 864 (947)
Q Consensus 832 ~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 864 (947)
..||+|+||||.||-..|.-+--=|++-++.+-
T Consensus 118 ~~GDvi~iPaG~~h~~~N~g~~~l~~v~~~d~~ 150 (493)
T 2d5f_A 118 NEGDVLVIPPGVPYWTYNTGDEPVVAISLLDTS 150 (493)
T ss_dssp ETTEEEEECTTCCEEEEECSSSCEEEEEEECTT
T ss_pred cCCCEEEECCCCcEEEEeCCCCCEEEEEEecCc
Confidence 679999999999999999987555555444433
No 159
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=53.15 E-value=2.7 Score=34.41 Aligned_cols=49 Identities=27% Similarity=0.709 Sum_probs=35.7
Q ss_pred cCCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002251 191 TGGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (947)
Q Consensus 191 ~~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (947)
.....|..|++. +.++.|-.|. ..|=..||..-...+. .-.|.||.|..
T Consensus 7 ~~~~~C~vC~~~--g~ll~Cd~C~-~~~H~~Cl~ppl~~~p--~g~W~C~~C~~ 55 (56)
T 2yql_A 7 GHEDFCSVCRKS--GQLLMCDTCS-RVYHLDCLDPPLKTIP--KGMWICPRCQD 55 (56)
T ss_dssp SSCCSCSSSCCS--SCCEECSSSS-CEECSSSSSSCCCSCC--CSSCCCHHHHC
T ss_pred CCCCCCccCCCC--CeEEEcCCCC-cceECccCCCCcCCCC--CCceEChhhhC
Confidence 467789999975 4699999999 4788888864333322 23799999854
No 160
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=53.08 E-value=5.3 Score=33.20 Aligned_cols=48 Identities=21% Similarity=0.417 Sum_probs=33.8
Q ss_pred CCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002251 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (947)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (947)
....|--|.....+.++.-.-|+...||..|+.++.. ..+.||.||..
T Consensus 7 ~~~~C~IC~~~~~~~~~~~~pCgH~~~C~~C~~~~~~------~~~~CPiCR~~ 54 (64)
T 2vje_A 7 AIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKK------RNKPCPVCRQP 54 (64)
T ss_dssp GGSCCTTTSSSCSCEEEEETTEEEEEECHHHHHHHHH------TTCCCTTTCCC
T ss_pred CcCCCCcCCCCCCCEEEECCCCCChhhHHHHHHHHHH------cCCcCCCcCcc
Confidence 4567888987777655433357744489999988763 24689999973
No 161
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=53.04 E-value=12 Score=31.62 Aligned_cols=42 Identities=26% Similarity=0.708 Sum_probs=30.3
Q ss_pred cCCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002251 191 TGGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (947)
Q Consensus 191 ~~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (947)
.....|--|.......+ -.-|+...||..|+.+ .+.||.||.
T Consensus 13 ~~~~~C~IC~~~~~~~v--~~pCgH~~~C~~C~~~----------~~~CP~CR~ 54 (68)
T 2ea5_A 13 ENSKDCVVCQNGTVNWV--LLPCRHTCLCDGCVKY----------FQQCPMCRQ 54 (68)
T ss_dssp CCSSCCSSSSSSCCCCE--ETTTTBCCSCTTHHHH----------CSSCTTTCC
T ss_pred CCCCCCCCcCcCCCCEE--EECCCChhhhHHHHhc----------CCCCCCCCc
Confidence 35678999988776533 2356643499999983 268999996
No 162
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=52.47 E-value=4.1 Score=43.80 Aligned_cols=25 Identities=12% Similarity=0.215 Sum_probs=22.3
Q ss_pred eEEEeecCceEEecCCCcccccccc
Q 002251 827 WSFEQHLGEAVFIPAGCPFQVRNLQ 851 (947)
Q Consensus 827 Wtf~Q~lGEAVFIPAGCPHQVRNLk 851 (947)
-++.=..||++|||+|.||..+|.-
T Consensus 96 ~~~~l~~GD~~~ip~g~~H~~~n~~ 120 (361)
T 2vqa_A 96 EIADVDKGGLWYFPRGWGHSIEGIG 120 (361)
T ss_dssp EEEEEETTEEEEECTTCEEEEEECS
T ss_pred EEEEEcCCCEEEECCCCeEEEEeCC
Confidence 4567778999999999999999986
No 163
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=51.48 E-value=6.4 Score=39.43 Aligned_cols=35 Identities=14% Similarity=0.024 Sum_probs=25.9
Q ss_pred EEEeecCceEEecCCCccccccccccceeeccccCC
Q 002251 828 SFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFP 863 (947)
Q Consensus 828 tf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSP 863 (947)
++.=..||+| ||+|.||+.+|.-.---..+-.++|
T Consensus 119 ~~~L~~GDsi-~~~g~~H~~~N~g~~~ar~l~V~~P 153 (172)
T 3es1_A 119 KRTVRQGGII-VQRGTNHLWRNTTDKPCRIAFILIE 153 (172)
T ss_dssp EEEECTTCEE-EECSCCBEEECCSSSCEEEEEEEEE
T ss_pred EEEECCCCEE-EeCCCcEEEEeCCCCCEEEEEEEcC
Confidence 4566799999 9999999999987654444444444
No 164
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=51.21 E-value=7.3 Score=36.10 Aligned_cols=49 Identities=24% Similarity=0.716 Sum_probs=35.8
Q ss_pred CCCccccccCC--CCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002251 193 GQICHQCRRND--RERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (947)
Q Consensus 193 ~~~CHQCrqkt--~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (947)
-+.|+-|++.. .+.++.|..|.+ .|=..||..-..++.. -.|.||.|+.
T Consensus 61 C~~C~vC~~~~~~~~~ll~Cd~C~~-~yH~~Cl~p~l~~~P~--~~W~C~~C~~ 111 (112)
T 3v43_A 61 CKTCSSCRDQGKNADNMLFCDSCDR-GFHMECCDPPLTRMPK--GMWICQICRP 111 (112)
T ss_dssp TCCBTTTCCCCCTTCCCEECTTTCC-EECGGGCSSCCSSCCS--SCCCCTTTSC
T ss_pred CCccccccCcCCCccceEEcCCCCC-eeecccCCCCCCCCCC--CCeECCCCCC
Confidence 44688888753 357999999994 8889999655554332 2799999974
No 165
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=51.17 E-value=12 Score=29.69 Aligned_cols=47 Identities=28% Similarity=0.804 Sum_probs=34.6
Q ss_pred CccccccCC-CCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002251 195 ICHQCRRND-RERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (947)
Q Consensus 195 ~CHQCrqkt-~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (947)
.|..|++.. .+.++.|-.|.+ .|=..||.--..++. +-.|.||.|+.
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~-~~H~~Cl~p~l~~~P--~g~W~C~~C~~ 49 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNK-AFHLFCLRPALYEVP--DGEWQCPACQP 49 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCC-EECHHHHCTTCCSCC--SSCCSCTTTSC
T ss_pred CCCCCCCCCCCCCEEECCCCCh-hhCcccCCCCcCCCC--CCcEECcCccc
Confidence 588898876 457999999995 788889864333322 23799999975
No 166
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=51.12 E-value=5.8 Score=45.40 Aligned_cols=34 Identities=18% Similarity=0.224 Sum_probs=26.1
Q ss_pred ecCceEEecCCCccccccccccceeeccccCCCC
Q 002251 832 HLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPES 865 (947)
Q Consensus 832 ~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEn 865 (947)
..||+|+||||.||-..|.-+--=+++-++++-|
T Consensus 132 ~~GDv~~iPaG~~H~~~N~g~~~l~~l~~~d~~n 165 (459)
T 2e9q_A 132 REGDLLVVPAGVSHWMYNRGQSDLVLIVFADTRN 165 (459)
T ss_dssp ETTEEEEECTTCCEEEEECSSSCEEEEEEEESSS
T ss_pred cCCCEEEECCCCCEEEEeCCCCCEEEEEEecCCC
Confidence 5699999999999999999865555554444443
No 167
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=50.86 E-value=21 Score=31.12 Aligned_cols=48 Identities=21% Similarity=0.509 Sum_probs=36.3
Q ss_pred CCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002251 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (947)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (947)
.-..|.-|+.--. .-..|..|+ .+|=..||.+|+... ..-.||.||..
T Consensus 14 ~i~~C~IC~~~i~-~g~~C~~C~-h~fH~~Ci~kWl~~~----~~~~CP~Cr~~ 61 (74)
T 2ct0_A 14 AVKICNICHSLLI-QGQSCETCG-IRMHLPCVAKYFQSN----AEPRCPHCNDY 61 (74)
T ss_dssp SSCBCSSSCCBCS-SSEECSSSC-CEECHHHHHHHSTTC----SSCCCTTTCSC
T ss_pred CCCcCcchhhHcc-cCCccCCCC-chhhHHHHHHHHHhc----CCCCCCCCcCc
Confidence 5567888886654 356899999 589999999999642 12589999864
No 168
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=50.76 E-value=5 Score=41.94 Aligned_cols=46 Identities=20% Similarity=0.277 Sum_probs=30.9
Q ss_pred cCCCcCcceecCHHHHHHHHHHhCcc-ceEEEeecCceEEecCCCcccccccc
Q 002251 800 THPLYGEVVYLNGDHKRKLKEEFGVE-PWSFEQHLGEAVFIPAGCPFQVRNLQ 851 (947)
Q Consensus 800 ~hPIHDQ~fYLd~~hk~rLkEEyGVe-pWtf~Q~lGEAVFIPAGCPHQVRNLk 851 (947)
.|| ++|.+|+=.. .-||.|. .=++.=..||.||||+|.||-+|+..
T Consensus 149 sHp-~EEiy~VLsG-----~~e~~v~~g~~~~l~pGd~v~ipsgv~Ha~rt~d 195 (217)
T 4b29_A 149 EHL-PEELYSVVSG-----RALFHLRNAPDLMLEPGQTRFHPANAPHAMTTLT 195 (217)
T ss_dssp ECS-SEEEEEEEEE-----CEEEEETTSCCEEECTTCEEEECTTCCEEEECCS
T ss_pred CCC-CceEEEEEeC-----CEEEEECCCCEEecCCCCEEEcCCCCceeEEECC
Confidence 466 4555554322 1246555 44566789999999999999999743
No 169
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=49.60 E-value=6.1 Score=40.88 Aligned_cols=32 Identities=19% Similarity=0.350 Sum_probs=26.1
Q ss_pred HhCccceEEEeecCceEEecCCCccccccccc
Q 002251 821 EFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQS 852 (947)
Q Consensus 821 EyGVepWtf~Q~lGEAVFIPAGCPHQVRNLkS 852 (947)
+|-+..=++.=..||.+|++||+||+.+|.-.
T Consensus 198 ~~~~~~~~~~l~~GD~~~~~~~~pH~~~n~g~ 229 (246)
T 1sfn_A 198 LYKLEENYYPVTAGDIIWMGAHCPQWYGALGR 229 (246)
T ss_dssp EEEETTEEEEEETTCEEEECTTCCEEEEEESS
T ss_pred EEEECCEEEEcCCCCEEEECCCCCEEEEcCCC
Confidence 45566666677889999999999999999654
No 170
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=49.25 E-value=7.8 Score=42.79 Aligned_cols=42 Identities=26% Similarity=0.719 Sum_probs=32.4
Q ss_pred CCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002251 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (947)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (947)
....|.-|...-...+.. .|+...||..|+..+ ..||.||..
T Consensus 294 ~~~~C~IC~~~~~~~v~l--pCgH~~fC~~C~~~~----------~~CP~CR~~ 335 (345)
T 3t6p_A 294 EERTCKVCMDKEVSVVFI--PCGHLVVCQECAPSL----------RKCPICRGI 335 (345)
T ss_dssp TTCBCTTTSSSBCCEEEE--TTCCEEECTTTGGGC----------SBCTTTCCB
T ss_pred CCCCCCccCCcCCceEEc--CCCChhHhHHHHhcC----------CcCCCCCCC
Confidence 567999999877654433 688534999999977 689999974
No 171
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=48.11 E-value=6.3 Score=41.26 Aligned_cols=31 Identities=13% Similarity=0.103 Sum_probs=25.1
Q ss_pred hCccceEEEeecCceEEecCCCccccccccc
Q 002251 822 FGVEPWSFEQHLGEAVFIPAGCPFQVRNLQS 852 (947)
Q Consensus 822 yGVepWtf~Q~lGEAVFIPAGCPHQVRNLkS 852 (947)
+.|..=++.=..||++++|||.||+++|.-+
T Consensus 97 ~~~~~~~~~L~~GD~~~~~~~~~H~~~N~~~ 127 (274)
T 1sef_A 97 VSDGQETHELEAGGYAYFTPEMKMYLANAQE 127 (274)
T ss_dssp EECSSCEEEEETTEEEEECTTSCCEEEESSS
T ss_pred EEECCEEEEECCCCEEEECCCCCEEEEeCCC
Confidence 3444556777889999999999999999854
No 172
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=47.41 E-value=8.8 Score=39.26 Aligned_cols=48 Identities=13% Similarity=0.036 Sum_probs=34.7
Q ss_pred cCCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCCcc
Q 002251 191 TGGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGSC 246 (947)
Q Consensus 191 ~~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg~C 246 (947)
.....|.-|..--.+.++ +.|+ ..||..||..|..+. ...||+|+...
T Consensus 206 ~~~~~c~i~~~~~~dPv~--~~~g-h~f~~~~i~~~~~~~-----~~~cP~~~~~~ 253 (281)
T 2c2l_A 206 PDYLCGKISFELMREPCI--TPSG-ITYDRKDIEEHLQRV-----GHFNPVTRSPL 253 (281)
T ss_dssp CSTTBCTTTCSBCSSEEE--CSSC-CEEETTHHHHHHHHT-----CSSCTTTCCCC
T ss_pred CcccCCcCcCCHhcCCeE--CCCC-CEECHHHHHHHHHHC-----CCCCcCCCCCC
Confidence 356788888877776555 4588 589999999997431 22499998644
No 173
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=47.24 E-value=8.3 Score=39.93 Aligned_cols=31 Identities=23% Similarity=0.291 Sum_probs=25.1
Q ss_pred hCccceEEEeecCceEEecCCCccccccccc
Q 002251 822 FGVEPWSFEQHLGEAVFIPAGCPFQVRNLQS 852 (947)
Q Consensus 822 yGVepWtf~Q~lGEAVFIPAGCPHQVRNLkS 852 (947)
+.|..=++.=..||+++||||.||+.+|.-+
T Consensus 94 ~~~~~~~~~L~~Gd~~~~~~~~~H~~~N~~~ 124 (261)
T 1rc6_A 94 AKAEGKTFALSEGGYLYCPPGSLMTFVNAQA 124 (261)
T ss_dssp EEETTEEEEEETTEEEEECTTCCCEEEECSS
T ss_pred EEECCEEEEECCCCEEEECCCCCEEEEeCCC
Confidence 3344556777899999999999999999854
No 174
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=47.16 E-value=6 Score=42.28 Aligned_cols=24 Identities=8% Similarity=0.221 Sum_probs=20.7
Q ss_pred EEEeecCceEEecCCCcccccccc
Q 002251 828 SFEQHLGEAVFIPAGCPFQVRNLQ 851 (947)
Q Consensus 828 tf~Q~lGEAVFIPAGCPHQVRNLk 851 (947)
++.=..||++++|||.+||++|-.
T Consensus 110 ~~~L~~Gds~y~p~~~~H~~~N~~ 133 (266)
T 4e2q_A 110 SKKLTVDSYAYLPPNFHHSLDCVE 133 (266)
T ss_dssp CEEECTTEEEEECTTCCCEEEESS
T ss_pred EEEEcCCCEEEECCCCCEEEEeCC
Confidence 455678999999999999999954
No 175
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=46.75 E-value=7.8 Score=45.02 Aligned_cols=34 Identities=18% Similarity=0.316 Sum_probs=26.4
Q ss_pred ecCceEEecCCCccccccccccceeeccccCCCC
Q 002251 832 HLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPES 865 (947)
Q Consensus 832 ~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEn 865 (947)
..||+|+||||.||-..|.-+--=||+-++.+-|
T Consensus 131 ~~GDvi~iPaG~~hw~~N~g~~~l~~v~~~d~~n 164 (510)
T 3c3v_A 131 NEGDLIAVPTGVAFWLYNDHDTDVVAVSLTDTNN 164 (510)
T ss_dssp CTTEEEEECTTCEEEEEECSSSCEEEEEEECTTB
T ss_pred cCCCEEEECCCCCEEEEeCCCCCEEEEEEeCCCC
Confidence 5699999999999999999875555554454444
No 176
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=46.57 E-value=6 Score=41.90 Aligned_cols=32 Identities=16% Similarity=0.203 Sum_probs=26.1
Q ss_pred HhCccceEEEeecCceEEecCCCccccccccc
Q 002251 821 EFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQS 852 (947)
Q Consensus 821 EyGVepWtf~Q~lGEAVFIPAGCPHQVRNLkS 852 (947)
+|-+..=++.=..||.+|+|+||||+.+|.-.
T Consensus 224 ~~~~~~~~~~v~~GD~~~~~~~~~h~~~n~g~ 255 (278)
T 1sq4_A 224 VYRLNQDWVEVEAGDFMWLRAFCPQACYSGGP 255 (278)
T ss_dssp EEEETTEEEEEETTCEEEEEESCCEEEECCSS
T ss_pred EEEECCEEEEeCCCCEEEECCCCCEEEEcCCC
Confidence 45555666777899999999999999999754
No 177
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=46.26 E-value=15 Score=32.59 Aligned_cols=35 Identities=26% Similarity=0.508 Sum_probs=27.3
Q ss_pred cCCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCC
Q 002251 191 TGGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDI 230 (947)
Q Consensus 191 ~~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~ 230 (947)
.....|+.|+++.--....|+ |+ +.||. .-||++.
T Consensus 23 ~~~nRC~~CrKkvgL~gf~Cr-Cg-~~FCs---~HRy~e~ 57 (74)
T 1wfl_A 23 PKKNRCFMCRKKVGLTGFDCR-CG-NLFCG---LHRYSDK 57 (74)
T ss_dssp SCTTBCSSSCCBCGGGCEECT-TS-CEECS---SSCSTTT
T ss_pred CcCCcChhhCCcccccCeecC-CC-CEech---hcCCCcc
Confidence 456789999998543468998 99 58986 7889974
No 178
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=45.87 E-value=16 Score=33.52 Aligned_cols=58 Identities=21% Similarity=0.665 Sum_probs=42.9
Q ss_pred cCCCCccccccCCC-CCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCCcccccccccc
Q 002251 191 TGGQICHQCRRNDR-ERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGSCNCKACLRA 254 (947)
Q Consensus 191 ~~~~~CHQCrqkt~-~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg~CNCs~Clr~ 254 (947)
.+...|..|..... ..++.|..|.+ .|=..||......+ ....|.||.|. .|.+|.+.
T Consensus 5 ~~~~~C~~C~~~g~~~~ll~C~~C~~-~~H~~Cl~~~~~~~--~~~~W~C~~C~---~C~~C~~~ 63 (111)
T 2ysm_A 5 SSGANCAVCDSPGDLLDQFFCTTCGQ-HYHGMCLDIAVTPL--KRAGWQCPECK---VCQNCKQS 63 (111)
T ss_dssp CCCSCBTTTCCCCCTTTSEECSSSCC-EECTTTTTCCCCTT--TSTTCCCTTTC---CCTTTCCC
T ss_pred CCCCCCcCCCCCCCCcCCeECCCCCC-CcChHHhCCccccc--cccCccCCcCC---cccccCcc
Confidence 36678999987763 46799999995 78888997665322 23579999987 57777654
No 179
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=45.47 E-value=9.3 Score=34.31 Aligned_cols=37 Identities=22% Similarity=0.477 Sum_probs=29.7
Q ss_pred cCCCCccccccCC--CCCeEEcccCCCccccHhHHhhhcC
Q 002251 191 TGGQICHQCRRND--RERVVWCVKCDKRGYCDSCISTWYS 228 (947)
Q Consensus 191 ~~~~~CHQCrqkt--~~~~v~C~~C~~~~FC~~CL~~rY~ 228 (947)
.....|..|.++- ..+.-.|+.|+ ..||..|...+.+
T Consensus 7 ~~~~~C~~C~~~F~~~~RrHHCR~CG-~vfC~~Cs~~~~~ 45 (88)
T 1wfk_A 7 GMESRCYGCAVKFTLFKKEYGCKNCG-RAFCNGCLSFSAL 45 (88)
T ss_dssp CCCSBCTTTCCBCCSSSCEEECSSSC-CEEETTTSCEEEE
T ss_pred CcCCCCcCcCCcccCccccccCCCCC-CEEChhHcCCcee
Confidence 4667899999864 35678999999 5999999987643
No 180
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=45.19 E-value=15 Score=31.66 Aligned_cols=36 Identities=22% Similarity=0.633 Sum_probs=27.9
Q ss_pred CcCCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCC
Q 002251 190 DTGGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDI 230 (947)
Q Consensus 190 ~~~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~ 230 (947)
+.....|..|+++.--....| .|+ +.||. .-||++.
T Consensus 12 k~~~~rC~~C~kkvgl~~f~C-rCg-~~FC~---~HRy~e~ 47 (64)
T 1wfh_A 12 PQRPNRCTVCRKRVGLTGFMC-RCG-TTFCG---SHRYPEV 47 (64)
T ss_dssp CSSCCCCTTTCCCCCTTCEEC-SSS-CEECT---TTCSTTT
T ss_pred CCcCCcChhhCCccCccCEEe-ecC-CEecc---ccCCccc
Confidence 356789999999864446899 699 58986 6789874
No 181
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=44.84 E-value=8.3 Score=31.90 Aligned_cols=47 Identities=17% Similarity=0.382 Sum_probs=32.8
Q ss_pred CCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002251 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (947)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (947)
....|--|.....+.++.=..|+...||..|+.++... .+.||.||.
T Consensus 6 ~~~~C~IC~~~~~~~~~~~~pCgH~~~C~~C~~~~~~~------~~~CPiCR~ 52 (63)
T 2vje_B 6 LLKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKA------GASCPICKK 52 (63)
T ss_dssp GGSBCTTTSSSBSCEEEEETTEEEEEECHHHHHHHHHT------TCBCTTTCC
T ss_pred cCCCCcccCCcCCCeEEEecCCCCHhHHHHHHHHHHHh------CCcCCCcCc
Confidence 45678889877766554334566434999999876532 379999997
No 182
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=44.83 E-value=8.2 Score=32.25 Aligned_cols=49 Identities=24% Similarity=0.669 Sum_probs=35.6
Q ss_pred cCCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002251 191 TGGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (947)
Q Consensus 191 ~~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (947)
.....|..|++. +.++.|-.|.+ .|=..||.---.++. .-.|.||.|+.
T Consensus 7 ~~~~~C~vC~~~--g~ll~Cd~C~~-~fH~~Cl~ppl~~~p--~g~W~C~~C~~ 55 (61)
T 1mm2_A 7 HHMEFCRVCKDG--GELLCCDTCPS-SYHIHCLNPPLPEIP--NGEWLCPRCTC 55 (61)
T ss_dssp SSCSSCTTTCCC--SSCBCCSSSCC-CBCSSSSSSCCSSCC--SSCCCCTTTTT
T ss_pred CCCCcCCCCCCC--CCEEEcCCCCH-HHcccccCCCcCcCC--CCccCChhhcC
Confidence 456789999864 46999999995 788888864333322 23799999974
No 183
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=44.50 E-value=9.1 Score=43.99 Aligned_cols=30 Identities=17% Similarity=0.393 Sum_probs=23.2
Q ss_pred EEeecCceEEecCCCccccccccccceeec
Q 002251 829 FEQHLGEAVFIPAGCPFQVRNLQSTVQLGL 858 (947)
Q Consensus 829 f~Q~lGEAVFIPAGCPHQVRNLkSCIKVAl 858 (947)
+.=..||+|+||||.+|-..|.-+--=|++
T Consensus 115 ~~l~~GDvi~iPaG~~h~~~N~G~~~l~~i 144 (476)
T 1fxz_A 115 YNFREGDLIAVPTGVAWWMYNNEDTPVVAV 144 (476)
T ss_dssp EEECTTEEEEECTTCEEEEEECSSSCEEEE
T ss_pred EEEeCCCEEEECCCCcEEEEeCCCCCEEEE
Confidence 334579999999999999999975444443
No 184
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=44.41 E-value=10 Score=41.62 Aligned_cols=27 Identities=7% Similarity=0.105 Sum_probs=24.3
Q ss_pred ccceEEEeecCceEEecCCCccccccc
Q 002251 824 VEPWSFEQHLGEAVFIPAGCPFQVRNL 850 (947)
Q Consensus 824 VepWtf~Q~lGEAVFIPAGCPHQVRNL 850 (947)
|.+-+|.=..||+++||+|++||++|-
T Consensus 303 v~~~~~~~~~GD~~~vP~~~~H~~~n~ 329 (354)
T 2d40_A 303 IGNETFSFSAKDIFVVPTWHGVSFQTT 329 (354)
T ss_dssp ETTEEEEEETTCEEEECTTCCEEEEEE
T ss_pred ECCEEEEEcCCCEEEECCCCeEEEEeC
Confidence 457888999999999999999999994
No 185
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=42.68 E-value=11 Score=42.47 Aligned_cols=27 Identities=19% Similarity=0.108 Sum_probs=24.5
Q ss_pred CccceEEEeecCceEEecCCCcccccc
Q 002251 823 GVEPWSFEQHLGEAVFIPAGCPFQVRN 849 (947)
Q Consensus 823 GVepWtf~Q~lGEAVFIPAGCPHQVRN 849 (947)
-|.+=++.-..||+||||+|..|+++|
T Consensus 158 ~v~G~~~~~~~GD~i~~P~g~~H~~~N 184 (394)
T 3bu7_A 158 IVDGHKVELGANDFVLTPNGTWHEHGI 184 (394)
T ss_dssp EETTEEEEECTTCEEEECTTCCEEEEE
T ss_pred EECCEEEEEcCCCEEEECcCCCEEEEc
Confidence 455668999999999999999999999
No 186
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=42.53 E-value=16 Score=39.19 Aligned_cols=50 Identities=14% Similarity=0.329 Sum_probs=38.5
Q ss_pred cCCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCC--CCCcc
Q 002251 191 TGGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPA--CRGSC 246 (947)
Q Consensus 191 ~~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~--Crg~C 246 (947)
....+|.-|..--...++ .+.|+ ..||..||..|..+. ..|.||+ |+..+
T Consensus 179 ~~el~CPIcl~~f~DPVt-s~~CG-HsFcR~cI~~~~~~~----~~~~CPvtGCr~~l 230 (267)
T 3htk_C 179 KIELTCPITCKPYEAPLI-SRKCN-HVFDRDGIQNYLQGY----TTRDCPQAACSQVV 230 (267)
T ss_dssp BCCSBCTTTSSBCSSEEE-ESSSC-CEEEHHHHHHHSTTC----SCEECSGGGCSCEE
T ss_pred ceeeECcCccCcccCCee-eCCCC-CcccHHHHHHHHHhC----CCCCCCcccccCcC
Confidence 577899999977666554 46788 589999999998642 3489999 98843
No 187
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=42.49 E-value=26 Score=31.06 Aligned_cols=36 Identities=17% Similarity=0.568 Sum_probs=28.2
Q ss_pred CcCCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCC
Q 002251 190 DTGGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDI 230 (947)
Q Consensus 190 ~~~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~ 230 (947)
++....|+.|+++.--....| .|+ +.||. .-||++.
T Consensus 22 k~~~~RC~~C~kkvgL~~f~C-rCg-~~FCs---~HRy~e~ 57 (74)
T 1wfp_A 22 KSTATRCLSCNKKVGVTGFKC-RCG-STFCG---THRYPES 57 (74)
T ss_dssp TCCCCBCSSSCCBCTTTCEEC-TTS-CEECT---TTCSTTT
T ss_pred cccCccchhhcCcccccceEe-ccC-CEecc---ccCCCcC
Confidence 456789999998865457899 699 58986 6789874
No 188
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=42.19 E-value=8.1 Score=37.49 Aligned_cols=45 Identities=27% Similarity=0.520 Sum_probs=32.5
Q ss_pred CCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002251 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (947)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (947)
....|--|..--... +.+ .|+ -.||..||..|... ....||.||.
T Consensus 17 ~~~~C~IC~~~~~~p-v~~-~Cg-H~fC~~Ci~~~~~~-----~~~~CP~Cr~ 61 (170)
T 3hcs_A 17 SKYECPICLMALREA-VQT-PCG-HRFCKACIIKSIRD-----AGHKCPVDNE 61 (170)
T ss_dssp GGGBCTTTCSBCSSE-EEC-TTS-CEEEHHHHHHHHHH-----HCSBCTTTCC
T ss_pred CCCCCCCCChhhcCc-EEC-CCC-CHHHHHHHHHHHHh-----CCCCCCCCcc
Confidence 456888888765554 444 799 58999999998742 1238999875
No 189
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=41.71 E-value=49 Score=29.91 Aligned_cols=46 Identities=11% Similarity=-0.129 Sum_probs=35.0
Q ss_pred cCCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002251 191 TGGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (947)
Q Consensus 191 ~~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (947)
....+|-=|..--.+.++. .|+ ..||..||..|... ...||+|+..
T Consensus 27 p~~~~CpI~~~~m~dPV~~--~cG-htf~r~~I~~~l~~------~~~cP~~~~~ 72 (100)
T 2kre_A 27 PDEFRDPLMDTLMTDPVRL--PSG-TIMDRSIILRHLLN------SPTDPFNRQT 72 (100)
T ss_dssp STTTBCTTTCSBCSSEEEE--TTT-EEEEHHHHHHHTTS------CSBCSSSCCB
T ss_pred cHhhCCcCccCcccCCeEC--CCC-CEEchHHHHHHHHc------CCCCCCCCCC
Confidence 3567888888776665553 488 58999999999874 3589999863
No 190
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=41.20 E-value=15 Score=33.92 Aligned_cols=30 Identities=13% Similarity=0.179 Sum_probs=24.3
Q ss_pred hCccceEEEeecCceEEecCCCcccccccc
Q 002251 822 FGVEPWSFEQHLGEAVFIPAGCPFQVRNLQ 851 (947)
Q Consensus 822 yGVepWtf~Q~lGEAVFIPAGCPHQVRNLk 851 (947)
+-|..=++.=..||++|||+|.+|+.++-.
T Consensus 51 ~~i~~~~~~l~~Gd~~~i~p~~~H~~~~~~ 80 (164)
T 2arc_A 51 VKNQGREFVCRPGDILLFPPGEIHHYGRHP 80 (164)
T ss_dssp EEETTEEEEECTTCEEEECTTCCEEEEECT
T ss_pred EEECCEEEEecCCeEEEEcCCCCEEEEeCC
Confidence 345555677789999999999999988764
No 191
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=40.73 E-value=12 Score=36.99 Aligned_cols=33 Identities=15% Similarity=0.095 Sum_probs=27.9
Q ss_pred ecCceEEecCCCcccccccc----ccceee-----ccccCCC
Q 002251 832 HLGEAVFIPAGCPFQVRNLQ----STVQLG-----LDFLFPE 864 (947)
Q Consensus 832 ~lGEAVFIPAGCPHQVRNLk----SCIKVA-----lDFVSPE 864 (947)
..||.+++|+|.+|++.+.. -||-++ +-|+.|.
T Consensus 85 ~aGd~~~~P~g~~H~~~a~~~~~~gci~l~v~~GpL~~~~~~ 126 (165)
T 3cjx_A 85 TAGCYLYEPGGSIHQFNTPRDNEGQTEVIFMLSGCNVNFTQD 126 (165)
T ss_dssp ETTEEEEECTTCEECEECCTTCSSCEEEEEEEESCEEEECTT
T ss_pred CCCeEEEeCCCCceeeEeCCCCCCCcEEEEEEeccceecCCC
Confidence 58999999999999999998 897777 5666654
No 192
>2ct7_A Ring finger protein 31; IBR, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.4
Probab=40.49 E-value=10 Score=33.54 Aligned_cols=39 Identities=23% Similarity=0.671 Sum_probs=28.4
Q ss_pred ccccCcccc-cccCCCccccc----cccccCCCCCcchhhhhhH
Q 002251 311 RAKLSADEQ-MCCNICRIPII----DYHRHCGNCMYDLCLSCCQ 349 (947)
Q Consensus 311 ~a~~~~DER-vyCDnCkTSIv----D~HRSCp~CsYDLCLsCC~ 349 (947)
+..+..+.+ .||-+|.+.|. .....||.|.+..|..|-.
T Consensus 16 e~~v~~~~~~~wCP~C~~~~~~~~~~~~v~C~~C~~~FC~~C~~ 59 (86)
T 2ct7_A 16 EGVLMRDPKFLWCAQCSFGFIYEREQLEATCPQCHQTFCVRCKR 59 (86)
T ss_dssp CSCCCSCCCEECCSSSCCCEECCCSCSCEECTTTCCEECSSSCS
T ss_pred HHHHhcCCCEeECcCCCchheecCCCCceEeCCCCCccccccCC
Confidence 344444555 47999999764 3446899999999999964
No 193
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=40.10 E-value=10 Score=38.30 Aligned_cols=48 Identities=25% Similarity=0.598 Sum_probs=34.6
Q ss_pred CCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002251 193 GQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (947)
Q Consensus 193 ~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (947)
...|..|+... .++.|-.|.+ .|-..|+..--.... .-.|.||.|+..
T Consensus 2 ~~~C~~C~~~g--~ll~Cd~C~~-~~H~~Cl~p~l~~~p--~g~W~C~~C~~~ 49 (189)
T 2ro1_A 2 ATICRVCQKPG--DLVMCNQCEF-CFHLDCHLPALQDVP--GEEWSCSLCHVL 49 (189)
T ss_dssp CCCBTTTCCCS--SCCCCTTTCC-BCCSTTSTTCCSSCC--CTTCCTTTTSCS
T ss_pred CCcCccCCCCC--ceeECCCCCc-hhccccCCCCcccCC--CCCCCCcCccCC
Confidence 35688998654 5889999995 899999854332221 346999999865
No 194
>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=38.59 E-value=19 Score=32.71 Aligned_cols=36 Identities=19% Similarity=0.517 Sum_probs=28.1
Q ss_pred CcCCCCccccccCCCC-CeEEcccCCCccccHhHHhhhcCCC
Q 002251 190 DTGGQICHQCRRNDRE-RVVWCVKCDKRGYCDSCISTWYSDI 230 (947)
Q Consensus 190 ~~~~~~CHQCrqkt~~-~~v~C~~C~~~~FC~~CL~~rY~e~ 230 (947)
++....|+.|+++..- ....|+ |+ +.||. .-||++.
T Consensus 22 k~~~~rC~~C~kkvgl~~~f~Cr-Cg-~~FC~---~HRy~e~ 58 (85)
T 1wff_A 22 KKIMKHCFLCGKKTGLATSFECR-CG-NNFCA---SHRYAEA 58 (85)
T ss_dssp CCCCCBCSSSCCBCSSSSCEECT-TC-CEECT---TTCSTGG
T ss_pred cccCccchhhCCeecccCCeEcC-CC-CEecc---cCCCccC
Confidence 4567899999998754 378996 99 58986 6789873
No 195
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=37.12 E-value=4.1 Score=36.52 Aligned_cols=52 Identities=25% Similarity=0.495 Sum_probs=36.0
Q ss_pred CCCCccccccCCC---CCeEEcccCCCccccHhHHhhhcCCCc--hhhhhhcCCCCCC
Q 002251 192 GGQICHQCRRNDR---ERVVWCVKCDKRGYCDSCISTWYSDIP--LEELEKVCPACRG 244 (947)
Q Consensus 192 ~~~~CHQCrqkt~---~~~v~C~~C~~~~FC~~CL~~rY~e~~--~edv~~~CP~Crg 244 (947)
....|..|++.+. +.++.|-.|.+ .|=..|+.-...... ..+-.|.||.|+.
T Consensus 15 ~~~~C~vC~~~~~~~~~~ll~CD~C~~-~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~ 71 (88)
T 1wev_A 15 MGLACVVCRQMTVASGNQLVECQECHN-LYHQDCHKPQVTDKEVNDPRLVWYCARCTR 71 (88)
T ss_dssp HCCSCSSSCCCCCCTTCCEEECSSSCC-EEETTTSSSCCCHHHHHCTTCCCCCHHHHH
T ss_pred CCCcCCCCCCCCCCCCCceEECCCCCC-eEcCccCCCcccccccCCCCCCeeCccccc
Confidence 6779999999874 67999999995 677777654332100 1123699998854
No 196
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=36.82 E-value=13 Score=37.56 Aligned_cols=38 Identities=16% Similarity=0.156 Sum_probs=29.3
Q ss_pred ceE-EEeecCceEEecCCCccccccccccceeeccccCCCC
Q 002251 826 PWS-FEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPES 865 (947)
Q Consensus 826 pWt-f~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEn 865 (947)
+|+ ++..+||.|.||.|.+|...|.... |.++=||+-|
T Consensus 117 a~~~i~L~pGesvtIppg~~H~f~ageeg--vli~EvSt~~ 155 (175)
T 2y0o_A 117 VWHEIELEPGGQYTIPPNTKHWFQAGEEG--AVVTEMSSTS 155 (175)
T ss_dssp CCEEEEECTTCEEEECTTCCEEEEEEEEE--EEEEEEEECC
T ss_pred CCcEEEECCCCEEEECCCCcEEEEeCCCC--EEEEEEeCCC
Confidence 344 5899999999999999999995544 5566666544
No 197
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=36.79 E-value=12 Score=42.17 Aligned_cols=45 Identities=22% Similarity=0.325 Sum_probs=32.3
Q ss_pred CCCcCcceecCHHHHHHHHHHhCc----cceEEEeecCceEEecCCCccccccc
Q 002251 801 HPLYGEVVYLNGDHKRKLKEEFGV----EPWSFEQHLGEAVFIPAGCPFQVRNL 850 (947)
Q Consensus 801 hPIHDQ~fYLd~~hk~rLkEEyGV----epWtf~Q~lGEAVFIPAGCPHQVRNL 850 (947)
||-.++.+|+-.-. -.+|| ...++.=..||+++||+|.+|-+.|.
T Consensus 66 h~~a~E~~yVl~G~-----g~v~~v~~~~~~~~~l~~GDv~~iP~G~~H~~~N~ 114 (416)
T 1uij_A 66 HADADFLLFVLSGR-----AILTLVNNDDRDSYNLHPGDAQRIPAGTTYYLVNP 114 (416)
T ss_dssp EESEEEEEEEEESC-----EEEEEECSSCEEEEEECTTEEEEECTTCEEEEEEC
T ss_pred cCCCceEEEEEeeE-----EEEEEEECCCCeEEEecCCCEEEECCCCeEEEEec
Confidence 55555666665441 12343 35677778899999999999999999
No 198
>1vq8_T 50S ribosomal protein L24P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: b.34.5.1 PDB: 1vq4_T* 1vq5_T* 1vq6_T* 1vq7_T* 1s72_T* 1vq9_T* 1vqk_T* 1vql_T* 1vqm_T* 1vqn_T* 1vqo_T* 1vqp_T* 1yhq_T* 1yi2_T* 1yij_T* 1yit_T* 1yj9_T* 1yjn_T* 1yjw_T* 2otj_T* ...
Probab=36.37 E-value=9.7 Score=36.48 Aligned_cols=41 Identities=22% Similarity=0.306 Sum_probs=35.9
Q ss_pred CCCcCcceecCHHHHHHHHHHhCccceEEEeecCceEEecCCC
Q 002251 801 HPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGC 843 (947)
Q Consensus 801 hPIHDQ~fYLd~~hk~rLkEEyGVepWtf~Q~lGEAVFIPAGC 843 (947)
=|.|...-.+.+.+-+.|+++|||.-|.| +-||-|.|=||=
T Consensus 15 Ap~h~rrk~msa~LskeLr~ky~vr~~~I--kkGD~V~Vi~G~ 55 (120)
T 1vq8_T 15 APLHERHKQVRATLSADLREEYGQRNVRV--NAGDTVEVLRGD 55 (120)
T ss_dssp CCGGGSGGGGEEEECHHHHHHHTCSEEEC--CTTCEEEECSST
T ss_pred CCcchhhheeeCcCCHHHHHhhccccccc--cCCCEEEEEecC
Confidence 38889988888888899999999999976 579999999983
No 199
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=36.30 E-value=16 Score=33.78 Aligned_cols=46 Identities=22% Similarity=0.596 Sum_probs=32.5
Q ss_pred CCCeEEcccCCCccccHhHHhhhcCCCc--hhhhhhcCCCCCCcccccccccc
Q 002251 204 RERVVWCVKCDKRGYCDSCISTWYSDIP--LEELEKVCPACRGSCNCKACLRA 254 (947)
Q Consensus 204 ~~~~v~C~~C~~~~FC~~CL~~rY~e~~--~edv~~~CP~Crg~CNCs~Clr~ 254 (947)
.+.++.|..|++ .|=..||..... ++ .....|.||.|+ .|.+|.+.
T Consensus 23 ~~~Ll~C~~C~~-~~H~~Cl~~~~~-~~~~~~~~~W~C~~C~---~C~vC~~~ 70 (112)
T 3v43_A 23 PEELISCADCGN-SGHPSCLKFSPE-LTVRVKALRWQCIECK---TCSSCRDQ 70 (112)
T ss_dssp CCCCEECTTTCC-EECHHHHTCCHH-HHHHHHTSCCCCTTTC---CBTTTCCC
T ss_pred chhceEhhhcCC-CCCCchhcCCHH-HHHHhhccccccccCC---ccccccCc
Confidence 457999999995 788899853211 11 123479999998 58888864
No 200
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=36.29 E-value=15 Score=31.59 Aligned_cols=48 Identities=31% Similarity=0.768 Sum_probs=35.3
Q ss_pred CccccccCC-CCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002251 195 ICHQCRRND-RERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (947)
Q Consensus 195 ~CHQCrqkt-~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (947)
.|+.|++.. .+.++.|-.|.+ .|=..||..-...+. +...|.||.|+.
T Consensus 20 ~C~~C~~~~~~~~ll~CD~C~~-~yH~~Cl~Ppl~~~P-~g~~W~C~~C~~ 68 (70)
T 3asl_A 20 ACHLCGGRQDPDKQLMCDECDM-AFHIYCLDPPLSSVP-SEDEWYCPECRN 68 (70)
T ss_dssp SBTTTCCCSCGGGEEECTTTCC-EEEGGGSSSCCSSCC-SSSCCCCTTTSC
T ss_pred CCcCCCCcCCCCCEEEcCCCCC-ceecccCCCCcCCCC-CCCCcCCcCccC
Confidence 688888876 457999999994 788888875444332 233899999974
No 201
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=36.13 E-value=39 Score=30.77 Aligned_cols=48 Identities=17% Similarity=0.516 Sum_probs=34.3
Q ss_pred cCCCCccccccCCCCCeEEccc--CCCccccHhHHhhhcCCCchh-hhhhcCCCCCC
Q 002251 191 TGGQICHQCRRNDRERVVWCVK--CDKRGYCDSCISTWYSDIPLE-ELEKVCPACRG 244 (947)
Q Consensus 191 ~~~~~CHQCrqkt~~~~v~C~~--C~~~~FC~~CL~~rY~e~~~e-dv~~~CP~Crg 244 (947)
.....| -|++...+.++.|-+ |.+.-|=..|+. ++.. .-.|.||.|+.
T Consensus 34 ~e~~yC-iC~~~~~g~MI~CD~~dC~~~WfH~~CVg-----l~~~p~g~W~Cp~C~~ 84 (91)
T 1weu_A 34 NEPTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVG-----LTTKPRGKWFCPRCSQ 84 (91)
T ss_dssp CCCBCS-TTCCBCCSCCCCCSCSSCSCCCCCSTTTT-----CSSCCCSSCCCTTTCC
T ss_pred CCCcEE-ECCCCCCCCEeEecCCCCCCCCEecccCC-----cCcCCCCCEECcCccC
Confidence 356788 899987788999999 664456667775 2221 24799999974
No 202
>2yrc_A Protein transport protein SEC23A; zinc binding, copii, coat protein complex-II, endoplasmic reticulum, golgi, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yrd_A
Probab=36.08 E-value=9.2 Score=32.28 Aligned_cols=16 Identities=31% Similarity=0.974 Sum_probs=13.4
Q ss_pred CCCCcccC--------------CCCcceec
Q 002251 19 DDLRCKRS--------------DGKQWRCT 34 (947)
Q Consensus 19 ~~~rc~r~--------------dgk~wrc~ 34 (947)
++.||+|+ +||+|+|.
T Consensus 8 ~pvRC~r~~CraylNP~~~~~~~~~~W~C~ 37 (59)
T 2yrc_A 8 EPVLCSRTTCRAVLNPLCQVDYRAKLWACN 37 (59)
T ss_dssp CCCBCSCTTTCCBCCTTSEEEGGGTEEECS
T ss_pred CCcccCCCCCCeEECCceEEECCCCEEEcc
Confidence 68899992 58999995
No 203
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=36.03 E-value=6.4 Score=37.48 Aligned_cols=36 Identities=22% Similarity=0.469 Sum_probs=28.5
Q ss_pred CCCCccccccCC--CCCeEEcccCCCccccHhHHhhhcC
Q 002251 192 GGQICHQCRRND--RERVVWCVKCDKRGYCDSCISTWYS 228 (947)
Q Consensus 192 ~~~~CHQCrqkt--~~~~v~C~~C~~~~FC~~CL~~rY~ 228 (947)
....|..|..+- ..+.-.|+.|+ ..||..|...+.+
T Consensus 68 ~~~~C~~C~~~Fs~~~RrHHCR~CG-~vfC~~Cs~~~~~ 105 (125)
T 1joc_A 68 EVQNCMACGKGFSVTVRRHHCRQCG-NIFCAECSAKNAL 105 (125)
T ss_dssp GCCBCTTTCCBCCSSSCCEECTTTC-CEECGGGSCEEEC
T ss_pred CCCCCcCcCCccccccccccCCCCC-eEEChHHhCCccc
Confidence 456799998864 34678999999 5999999988754
No 204
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=35.88 E-value=16 Score=42.01 Aligned_cols=81 Identities=11% Similarity=0.061 Sum_probs=45.6
Q ss_pred ccCCCcCcceecCHHH-HHHHHHHhCccceEEEeecCceEEecCCCccccccccccceeeccccCCCCHHHHHHH---HH
Q 002251 799 VTHPLYGEVVYLNGDH-KRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRL---AE 874 (947)
Q Consensus 799 v~hPIHDQ~fYLd~~h-k~rLkEEyGVepWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~eC~rL---te 874 (947)
-.||-.++.+|+..-. +..+-.+-|-+-.+..=..||.++||+|.||.+.|...-+.+..=|+||.. ..- .| +.
T Consensus 354 H~Hp~a~Ei~yVl~G~~~v~v~~~~G~~~~~~~l~~GDv~viP~G~~H~~~ng~~~l~~l~f~~s~~p-~~~-~laG~~s 431 (476)
T 1fxz_A 354 HYNLNANSIIYALNGRALIQVVNCNGERVFDGELQEGRVLIVPQNFVVAARSQSDNFEYVSFKTNDTP-MIG-TLAGANS 431 (476)
T ss_dssp EEETTCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEECSTTEEEEEEESSSSC-CEE-ESSSTTC
T ss_pred eECCCCCEEEEEEeCEEEEEEEecCCCEEeeeEEcCCCEEEECCCCeEEEEeCCCCEEEEEEECCCCC-cee-EccchhH
Confidence 3678777777766542 111111222222333357899999999999999996444444444446532 111 22 34
Q ss_pred HHhcCCC
Q 002251 875 EIRCLPN 881 (947)
Q Consensus 875 EfR~Lp~ 881 (947)
=|+.+|.
T Consensus 432 ~~~~~p~ 438 (476)
T 1fxz_A 432 LLNALPE 438 (476)
T ss_dssp TGGGSCH
T ss_pred HHHhCCH
Confidence 4666665
No 205
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=35.45 E-value=9.7 Score=31.48 Aligned_cols=47 Identities=28% Similarity=0.746 Sum_probs=34.4
Q ss_pred CCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCC
Q 002251 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACR 243 (947)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Cr 243 (947)
....|..|++. +.++.|-.|. ..|=..|+..-...+. .-.|.||.|.
T Consensus 4 ~~~~C~vC~~~--g~ll~Cd~C~-~~fH~~Cl~ppl~~~p--~g~W~C~~C~ 50 (60)
T 2puy_A 4 HEDFCSVCRKS--GQLLMCDTCS-RVYHLDCLDPPLKTIP--KGMWICPRCQ 50 (60)
T ss_dssp CCSSCTTTCCC--SSCEECSSSS-CEECGGGSSSCCSSCC--CSCCCCHHHH
T ss_pred CCCCCcCCCCC--CcEEEcCCCC-cCEECCcCCCCcCCCC--CCceEChhcc
Confidence 45679999875 5799999999 5888889864333322 2379999884
No 206
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=35.34 E-value=14 Score=32.57 Aligned_cols=48 Identities=31% Similarity=0.772 Sum_probs=34.1
Q ss_pred CccccccCCC-CCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002251 195 ICHQCRRNDR-ERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (947)
Q Consensus 195 ~CHQCrqkt~-~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (947)
.|+.|++... +.++.|-.|.+ .|=..||.---..+. +...|.||.|+.
T Consensus 28 ~C~vC~~~~d~~~ll~CD~C~~-~yH~~Cl~PpL~~~P-~g~~W~C~~C~~ 76 (77)
T 3shb_A 28 ACHLCGGRQDPDKQLMCDECDM-AFHIYCLDPPLSSVP-SEDEWYCPECRN 76 (77)
T ss_dssp SBTTTCCCSCGGGEEECTTTCC-EEETTTSSSCCSSCC-SSSCCCCTTTC-
T ss_pred cCCccCCCCCCcceeEeCCCCC-ccCcccCCCcccCCC-CCCceECcCccc
Confidence 7899998874 57999999995 788888864333322 222499999985
No 207
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=34.69 E-value=8.2 Score=36.47 Aligned_cols=26 Identities=31% Similarity=0.811 Sum_probs=0.0
Q ss_pred cCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002251 212 KCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (947)
Q Consensus 212 ~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (947)
.|+ ..|+..||..|... ...||.||.
T Consensus 83 ~C~-H~FH~~CI~~Wl~~------~~~CP~Cr~ 108 (117)
T 4a0k_B 83 VCN-HAFHFHCISRWLKT------RQVCPLDNR 108 (117)
T ss_dssp ---------------------------------
T ss_pred CcC-ceEcHHHHHHHHHc------CCcCCCCCC
Confidence 577 58999999999764 357999986
No 208
>3j21_U 50S ribosomal protein L24P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=33.55 E-value=12 Score=35.89 Aligned_cols=39 Identities=26% Similarity=0.413 Sum_probs=34.8
Q ss_pred CCcCcceecCHHHHHHHHHHhCccceEEEeecCceEEecCC
Q 002251 802 PLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAG 842 (947)
Q Consensus 802 PIHDQ~fYLd~~hk~rLkEEyGVepWtf~Q~lGEAVFIPAG 842 (947)
|.|...-++.+.+=..|+++|||.-|.| +-||-|.|=+|
T Consensus 19 p~h~r~k~msa~LSkeLR~ky~~r~~~I--kkGD~V~Vi~G 57 (121)
T 3j21_U 19 PLHVRQKLMSAPLSRELREKYKVRNLPV--RVGDKVRIMRG 57 (121)
T ss_dssp CTTGGGGGSEEEBCHHHHHHTCCSEEEC--CSSSEEEECSS
T ss_pred CcchhhhhhcCcCCHHHHHHhCCccccc--ccCCEEEEeec
Confidence 7888888888888889999999999988 57999999998
No 209
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=33.13 E-value=11 Score=36.92 Aligned_cols=47 Identities=28% Similarity=0.675 Sum_probs=34.9
Q ss_pred cCCCCccccccCC--CCCeEEcccCCCccccHhHHhhhcCCCchhh----hhhcCCCCCC
Q 002251 191 TGGQICHQCRRND--RERVVWCVKCDKRGYCDSCISTWYSDIPLEE----LEKVCPACRG 244 (947)
Q Consensus 191 ~~~~~CHQCrqkt--~~~~v~C~~C~~~~FC~~CL~~rY~e~~~ed----v~~~CP~Crg 244 (947)
.....| -|++.. .+.++.|-.|. .-|-..|+. ++..+ -.|.||.|+.
T Consensus 6 ~~~~~C-~C~~~~~~~~~mi~Cd~C~-~WfH~~Cv~-----~~~~~~~~~~~~~C~~C~~ 58 (174)
T 2ri7_A 6 DTKLYC-ICKTPEDESKFYIGCDRCQ-NWYHGRCVG-----ILQSEAELIDEYVCPQCQS 58 (174)
T ss_dssp -CCEET-TTTEECCTTSCEEECTTTC-CEEEHHHHT-----CCHHHHTTCSSCCCHHHHH
T ss_pred CCCcEe-eCCCCCCCCCCEeECCCCC-chhChhhcC-----CchhhccCccCeecCCCcc
Confidence 466788 898864 45699999999 589999983 33332 3699999875
No 210
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=33.11 E-value=16 Score=32.82 Aligned_cols=35 Identities=20% Similarity=0.560 Sum_probs=28.3
Q ss_pred CCCCccccccCC--CCCeEEcccCCCccccHhHHhhhc
Q 002251 192 GGQICHQCRRND--RERVVWCVKCDKRGYCDSCISTWY 227 (947)
Q Consensus 192 ~~~~CHQCrqkt--~~~~v~C~~C~~~~FC~~CL~~rY 227 (947)
....|..|+++= ..+.-.|+.|+ ..||..|..++-
T Consensus 19 ~~~~C~~C~~~F~~~~RrhhCr~CG-~v~C~~Cs~~~~ 55 (90)
T 3t7l_A 19 EAPNCMNCQVKFTFTKRRHHCRACG-KVFCGVCCNRKC 55 (90)
T ss_dssp GCCBCTTTCCBCCSSSCCEECTTTC-CEECGGGSCEEE
T ss_pred cCCcCcCCCCcccchhhCccccCCC-CEECCcccCCee
Confidence 467899999764 34678999999 599999998874
No 211
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=31.32 E-value=17 Score=31.83 Aligned_cols=44 Identities=11% Similarity=-0.119 Sum_probs=33.1
Q ss_pred CCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002251 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (947)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (947)
....|-=|..--.+.++ ..|+ ..||..||..|..+ ...||+|+.
T Consensus 13 ~~~~CpI~~~~m~dPV~--~~cG-htf~r~~I~~~l~~------~~~cP~~~~ 56 (85)
T 2kr4_A 13 DEFRDPLMDTLMTDPVR--LPSG-TVMDRSIILRHLLN------SPTDPFNRQ 56 (85)
T ss_dssp TTTBCTTTCSBCSSEEE--CTTS-CEEEHHHHHHHHHH------CSBCTTTCC
T ss_pred hheECcccCchhcCCeE--CCCC-CEECHHHHHHHHhc------CCCCCCCcC
Confidence 56778888776665554 3488 58999999999853 368999985
No 212
>2d8v_A Zinc finger FYVE domain-containing protein 19; zfyve19, ZF- B_BOX, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.43.1.1
Probab=30.65 E-value=27 Score=30.45 Aligned_cols=37 Identities=27% Similarity=0.645 Sum_probs=29.7
Q ss_pred ccCcCCCCccccccCCCCCeEEcccCCCccccHhHHhhhc
Q 002251 188 SEDTGGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWY 227 (947)
Q Consensus 188 ~~~~~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY 227 (947)
++......|..|... ..++|..|..-.||.+|.+.--
T Consensus 3 ~~~ee~pWC~ICneD---AtlrC~gCdgDLYC~rC~rE~H 39 (67)
T 2d8v_A 3 SGSSGLPWCCICNED---ATLRCAGCDGDLYCARCFREGH 39 (67)
T ss_dssp SSCCCCSSCTTTCSC---CCEEETTTTSEEECSSHHHHHT
T ss_pred CcCcCCCeeEEeCCC---CeEEecCCCCceehHHHHHHHc
Confidence 445677899999865 3689999987899999987654
No 213
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=30.62 E-value=21 Score=41.47 Aligned_cols=102 Identities=8% Similarity=-0.074 Sum_probs=53.9
Q ss_pred CCCceeeeeccCCChhHHHHHHHHHHHHhCCCCCCCCCcccCCCcCcceecCHHH-HHHHHHHhCccceEEEeecCceEE
Q 002251 760 THPGAHWDVFRRQDVPKLIEYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDH-KRKLKEEFGVEPWSFEQHLGEAVF 838 (947)
Q Consensus 760 ~~~GAlWDIFrreDv~KLreyL~kh~~Ef~~~~~~~~~~v~hPIHDQ~fYLd~~h-k~rLkEEyGVepWtf~Q~lGEAVF 838 (947)
..+|.+.-+... +.|-|.. |.--...+...-......-.||-.++.+|+..-. +..+-.+-|-+-.+..=..||.++
T Consensus 351 ~~gG~v~~~~~~-~fP~L~~-l~is~a~v~L~PG~~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~G~~~~~~~l~~GDv~v 428 (510)
T 3c3v_A 351 PQAGSLKTANEL-NLLILRW-LGLSAEYGNLYRNALFVPHYNTNAHSIIYALRGRAHVQVVDSNGNRVYDEELQEGHVLV 428 (510)
T ss_dssp TTTEEEEEECTT-TSTTHHH-HTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEE
T ss_pred CCCeEEEEeccc-cCccccc-ceEEEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEeCCCCEEEeEEEcCCcEEE
Confidence 457777777764 5777652 2111111111111111114688777887776542 111111222223333357899999
Q ss_pred ecCCCccccccccccceeeccccCC
Q 002251 839 IPAGCPFQVRNLQSTVQLGLDFLFP 863 (947)
Q Consensus 839 IPAGCPHQVRNLkSCIKVAlDFVSP 863 (947)
||+|.||-+.|...-+.+..=|+|+
T Consensus 429 iP~G~~H~~~Ng~e~l~~l~f~~s~ 453 (510)
T 3c3v_A 429 VPQNFAVAGKSQSDNFEYVAFKTDS 453 (510)
T ss_dssp ECTTCEEEEEECSSEEEEEEEESSS
T ss_pred ECCCCeEEEEeCCCCEEEEEEECCC
Confidence 9999999999954444444433344
No 214
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=30.30 E-value=14 Score=38.86 Aligned_cols=50 Identities=30% Similarity=0.700 Sum_probs=32.8
Q ss_pred CCCccccccCC-CCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002251 193 GQICHQCRRND-RERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (947)
Q Consensus 193 ~~~CHQCrqkt-~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (947)
.-.|..|++.. .+.++.|-.|.+ .|=..||..--..+. +...|.||.|+.
T Consensus 174 ~c~C~vC~~~~~~~~lL~CD~C~~-~yH~~CL~PPL~~vP-~G~~W~Cp~C~~ 224 (226)
T 3ask_A 174 VCACHLCGGRQDPDKQLMCDECDM-AFHIYCLDPPLSSVP-SEDEWYCPECRN 224 (226)
T ss_dssp TTSCSSSCCCCC--CCEECSSSCC-EECSCC--CCCCSCC-SSSCCCCGGGC-
T ss_pred CCCCcCCCCCCCCCCeEEcCCCCc-ceeCccCCCCcccCC-CCCCCCCcCCcC
Confidence 44799999876 457999999995 677778864333322 223799999974
No 215
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=30.30 E-value=22 Score=31.37 Aligned_cols=35 Identities=20% Similarity=0.430 Sum_probs=28.6
Q ss_pred CCCCccccccCC--CCCeEEcccCCCccccHhHHhhhc
Q 002251 192 GGQICHQCRRND--RERVVWCVKCDKRGYCDSCISTWY 227 (947)
Q Consensus 192 ~~~~CHQCrqkt--~~~~v~C~~C~~~~FC~~CL~~rY 227 (947)
....|..|+++= ..+.-.|+.|+ ..||..|..++.
T Consensus 20 ~~~~C~~C~~~Fs~~~RrHHCR~CG-~v~C~~Cs~~~~ 56 (84)
T 1z2q_A 20 DAPACNGCGCVFTTTVRRHHCRNCG-YVLCGDCSRHRA 56 (84)
T ss_dssp TCCBCTTTCCBCCTTSCCEECTTTC-CEECTGGGCCEE
T ss_pred CCCCCcCcCCccccchhcccccCCC-cEEChHHhCCeE
Confidence 566899999875 34678999999 599999998874
No 216
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=30.24 E-value=23 Score=40.11 Aligned_cols=28 Identities=32% Similarity=0.334 Sum_probs=24.1
Q ss_pred ceEEEeecCceEEecCCCcccccccc-cc
Q 002251 826 PWSFEQHLGEAVFIPAGCPFQVRNLQ-ST 853 (947)
Q Consensus 826 pWtf~Q~lGEAVFIPAGCPHQVRNLk-SC 853 (947)
..++.=..||+++||+|.+|.+.|.- ++
T Consensus 102 ~~~~~l~~GDv~~iP~G~~H~~~N~g~~e 130 (434)
T 2ea7_A 102 RDSYILEQGHAQKIPAGTTFFLVNPDDNE 130 (434)
T ss_dssp EEEEEEETTEEEEECTTCEEEEEECCSSC
T ss_pred CEEEEeCCCCEEEECCCccEEEEeCCCCC
Confidence 45777788999999999999999996 54
No 217
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=29.95 E-value=25 Score=39.95 Aligned_cols=27 Identities=30% Similarity=0.485 Sum_probs=23.6
Q ss_pred eEEEeecCceEEecCCCcccccccc-cc
Q 002251 827 WSFEQHLGEAVFIPAGCPFQVRNLQ-ST 853 (947)
Q Consensus 827 Wtf~Q~lGEAVFIPAGCPHQVRNLk-SC 853 (947)
.++.=..||.++||+|.+|.+.|.- ++
T Consensus 128 ~~~~l~~GDv~~~P~G~~H~~~N~g~~~ 155 (445)
T 2cav_A 128 DTYKLDQGDAIKIQAGTPFYLINPDNNQ 155 (445)
T ss_dssp EEEEEETTEEEEECTTCCEEEEECCSSC
T ss_pred EEEEecCCCEEEECCCCcEEEEECCCCC
Confidence 5677788999999999999999996 44
No 218
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=29.11 E-value=37 Score=39.70 Aligned_cols=64 Identities=20% Similarity=0.390 Sum_probs=39.3
Q ss_pred hhhhhhhhhhhhhhhhhhccccccccccccCcccccccCCCccccccccccCC--CC---CcchhhhhhHHh
Q 002251 285 VKQIHQIQCSEVELEKKLRGNEIDLARAKLSADEQMCCNICRIPIIDYHRHCG--NC---MYDLCLSCCQDL 351 (947)
Q Consensus 285 Lkqi~~EQ~~E~EiEAkIqG~~i~i~~a~~~~DERvyCDnCkTSIvD~HRSCp--~C---sYDLCLsCC~EL 351 (947)
++.|.++|.....+. -+|+++.. ......+...||..|++-+|++.-.|+ +| .++.|+.|..+-
T Consensus 427 ~rsl~~~~~~~~~l~--~~g~~i~~-~~~~~~~~~~~C~~C~~~lFn~~~v~~~~~~~~~~~v~C~~Ca~~~ 495 (531)
T 3avr_A 427 LRTLKQCQTLREALI--AAGKEIIW-HGRTKEEPAHYCSICEVEVFDLLFVTNESNSRKTYIVHCQDCARKT 495 (531)
T ss_dssp HHHHHHHHHHHHHHH--HTTCCEEE-CCCCTTCCCEECTTTCCEECSEEEEEECTTCSSEEEEECHHHHHHH
T ss_pred HHHHHHHHHHHHHHH--hCCCEEEe-ccccCCCCCeeccccchhheeeEEEEecCCCCCCCCcCChhhhhhc
Confidence 455666554322222 22443321 122234567899999999999997774 23 247999999974
No 219
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=28.81 E-value=27 Score=30.19 Aligned_cols=47 Identities=17% Similarity=0.523 Sum_probs=34.1
Q ss_pred CCCCccccccCCCCCeEEccc--CCCccccHhHHhhhcCCCchh-hhhhcCCCCCC
Q 002251 192 GGQICHQCRRNDRERVVWCVK--CDKRGYCDSCISTWYSDIPLE-ELEKVCPACRG 244 (947)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~--C~~~~FC~~CL~~rY~e~~~e-dv~~~CP~Crg 244 (947)
....| -|++...+.++.|-+ |.+.-|=..|+. ++.. .-.|.||.|+.
T Consensus 15 ~~~~C-~C~~~~~g~MI~CD~~~C~~~wfH~~Cvg-----l~~~p~g~w~Cp~C~~ 64 (71)
T 1wen_A 15 EPTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVG-----LTTKPRGKWFCPRCSQ 64 (71)
T ss_dssp SCCCS-TTCCCSCSSEECCSCSSCSCCCEETTTTT-----CSSCCSSCCCCTTTSS
T ss_pred CCCEE-ECCCCCCCCEeEeeCCCCCCccEecccCC-----cCcCCCCCEECCCCCc
Confidence 56788 599987788999999 764457677775 2222 24799999964
No 220
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=28.75 E-value=39 Score=28.80 Aligned_cols=50 Identities=28% Similarity=0.617 Sum_probs=36.7
Q ss_pred CCCCccccccCCCC-CeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002251 192 GGQICHQCRRNDRE-RVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (947)
Q Consensus 192 ~~~~CHQCrqkt~~-~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (947)
....|.-|++...+ .++.|-.|. .-|=..|+.---.. .....|.||.|+.
T Consensus 17 ~~~~C~~C~~~~~~~~mi~CD~C~-~wfH~~Cv~~~~~~--~~~~~w~C~~C~~ 67 (75)
T 2k16_A 17 QIWICPGCNKPDDGSPMIGCDDCD-DWYHWPCVGIMAAP--PEEMQWFCPKCAN 67 (75)
T ss_dssp EEECBTTTTBCCSSCCEEECSSSS-SEEEHHHHTCSSCC--CSSSCCCCTTTHH
T ss_pred CCcCCCCCCCCCCCCCEEEcCCCC-cccccccCCCCccC--CCCCCEEChhccC
Confidence 55679999988765 699999999 57888888643322 1235799999963
No 221
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=28.01 E-value=27 Score=37.87 Aligned_cols=25 Identities=20% Similarity=0.454 Sum_probs=22.2
Q ss_pred EEEeecCceEEecCCCccccccccc
Q 002251 828 SFEQHLGEAVFIPAGCPFQVRNLQS 852 (947)
Q Consensus 828 tf~Q~lGEAVFIPAGCPHQVRNLkS 852 (947)
++.=..||.++||+|.+|.++|...
T Consensus 123 ~~~l~~GD~~~ip~g~~H~~~n~~~ 147 (385)
T 1j58_A 123 IDDVGEGDLWYFPSGLPHSIQALEE 147 (385)
T ss_dssp EEEEETTEEEEECTTCCEEEEEEEE
T ss_pred EEEeCCCCEEEECCCCeEEEEECCC
Confidence 5577799999999999999999865
No 222
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=27.85 E-value=24 Score=30.99 Aligned_cols=36 Identities=25% Similarity=0.660 Sum_probs=28.8
Q ss_pred CCCCccccccCC--CCCeEEcccCCCccccHhHHhhhcC
Q 002251 192 GGQICHQCRRND--RERVVWCVKCDKRGYCDSCISTWYS 228 (947)
Q Consensus 192 ~~~~CHQCrqkt--~~~~v~C~~C~~~~FC~~CL~~rY~ 228 (947)
....|..|.++- ..+.-.|+.|+ ..||..|..++.+
T Consensus 18 ~~~~C~~C~~~Fs~~~RrHHCR~CG-~v~C~~Cs~~~~~ 55 (82)
T 2yw8_A 18 EATHCRQCEKEFSISRRKHHCRNCG-HIFCNTCSSNELA 55 (82)
T ss_dssp CCCBCTTTCCBCBTTBCCEECTTTC-CEECSGGGCEEEC
T ss_pred cCCcccCcCCcccCccccccCCCCC-CEEChHHhCCeee
Confidence 456799999865 34678999999 5999999988754
No 223
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=27.63 E-value=1.5e+02 Score=25.55 Aligned_cols=47 Identities=26% Similarity=0.528 Sum_probs=34.2
Q ss_pred cCCCCccccccCC--CCCeEEcccCCCccccHhHHhhhcCCCchhh----hhhcCCCCCC
Q 002251 191 TGGQICHQCRRND--RERVVWCVKCDKRGYCDSCISTWYSDIPLEE----LEKVCPACRG 244 (947)
Q Consensus 191 ~~~~~CHQCrqkt--~~~~v~C~~C~~~~FC~~CL~~rY~e~~~ed----v~~~CP~Crg 244 (947)
.....| -|++.. .+.+|.|-.|. .-|=..|+. ++.+. ..|.||.|+.
T Consensus 10 ~~~~~C-~C~~~~d~~~~MIqCd~C~-~WfH~~Cvg-----l~~~~~~~~~~~~C~~C~~ 62 (79)
T 1wep_A 10 LVPVYC-LCRQPYNVNHFMIECGLCQ-DWFHGSCVG-----IEEENAVDIDIYHCPDCEA 62 (79)
T ss_dssp CCCCCS-TTSCSCCSSSCEEEBTTTC-CEEEHHHHT-----CCHHHHTTCSBBCCTTTTT
T ss_pred CCccEE-EcCCccCCCCceEEcCCCC-CcEEeeecC-----cccccccCCCeEECCCccc
Confidence 466778 788865 56799999998 467777773 34332 3699999986
No 224
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.38 E-value=24 Score=31.13 Aligned_cols=36 Identities=19% Similarity=0.458 Sum_probs=29.1
Q ss_pred CCCCccccccCC--CCCeEEcccCCCccccHhHHhhhcC
Q 002251 192 GGQICHQCRRND--RERVVWCVKCDKRGYCDSCISTWYS 228 (947)
Q Consensus 192 ~~~~CHQCrqkt--~~~~v~C~~C~~~~FC~~CL~~rY~ 228 (947)
....|..|+++= ..+.--|+.|+ ..||..|..++.+
T Consensus 13 ~~~~C~~C~~~F~~~~RrHHCR~CG-~vfC~~Cs~~~~~ 50 (84)
T 1x4u_A 13 NFGNCTGCSATFSVLKKRRSCSNCG-NSFCSRCCSFKVP 50 (84)
T ss_dssp CCSSCSSSCCCCCSSSCCEECSSSC-CEECTTTSCEEEC
T ss_pred CCCcCcCcCCccccchhhhhhcCCC-cEEChhhcCCcee
Confidence 566899999875 34678999999 5999999987754
No 225
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=27.06 E-value=18 Score=34.44 Aligned_cols=36 Identities=22% Similarity=0.553 Sum_probs=25.9
Q ss_pred CCCCccccccCC--CCCeEEcccCCCccccHhHHhhhcC
Q 002251 192 GGQICHQCRRND--RERVVWCVKCDKRGYCDSCISTWYS 228 (947)
Q Consensus 192 ~~~~CHQCrqkt--~~~~v~C~~C~~~~FC~~CL~~rY~ 228 (947)
....|..|..+= ..+.-.|++|+ +.||..|..++.+
T Consensus 18 ~~~~C~~C~~~Fs~~~RkHHCR~CG-~ifC~~Cs~~~~~ 55 (120)
T 1y02_A 18 LEPSCKSCGAHFANTARKQTCLDCK-KNFCMTCSSQVGN 55 (120)
T ss_dssp --CCCTTTCCCCSSGGGCEECTTTC-CEECGGGEEC---
T ss_pred ccCcccCcCCccccccccccCCCCC-CeeCHHHhCCCCC
Confidence 346899998764 24678999999 5999999988865
No 226
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=27.04 E-value=23 Score=33.85 Aligned_cols=26 Identities=4% Similarity=-0.217 Sum_probs=22.3
Q ss_pred ecCceEEecCCCccc-cccccccceee
Q 002251 832 HLGEAVFIPAGCPFQ-VRNLQSTVQLG 857 (947)
Q Consensus 832 ~lGEAVFIPAGCPHQ-VRNLkSCIKVA 857 (947)
..||.+++|+|.+|+ +.+...|+=+.
T Consensus 89 ~~Gd~~~~p~g~~H~p~~~~e~~~~l~ 115 (145)
T 2o1q_A 89 IAPGYGYESANARHDKTEFPVASEFYM 115 (145)
T ss_dssp ESSEEEEECTTCEESCCEEEEEEEEEE
T ss_pred CCCEEEEECcCCccCCeECCCCeEEEE
Confidence 689999999999999 88888886443
No 227
>2od1_A Protein CBFA2T1; zinc finger, cross-braced topology, metal binding protein; NMR {Homo sapiens}
Probab=26.85 E-value=29 Score=28.67 Aligned_cols=32 Identities=25% Similarity=0.717 Sum_probs=24.9
Q ss_pred cCCCCccccccCCCCCeEEcccCCCccccH-hHHhh
Q 002251 191 TGGQICHQCRRNDRERVVWCVKCDKRGYCD-SCIST 225 (947)
Q Consensus 191 ~~~~~CHQCrqkt~~~~v~C~~C~~~~FC~-~CL~~ 225 (947)
.....|..|... ....|+.|+...||. .|-..
T Consensus 11 ~~~~~C~~C~~~---~~~~Cs~C~~v~YCs~~CQ~~ 43 (60)
T 2od1_A 11 DSSESCWNCGRK---ASETCSGCNTARYCGSFCQHK 43 (60)
T ss_dssp CCSSCCTTTSSC---CCEECTTTSCCEESSHHHHHH
T ss_pred CCCCccccCCCc---ccccCCCCCCeeecCHHHHHH
Confidence 467899999973 467999999888995 56544
No 228
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=26.72 E-value=18 Score=37.04 Aligned_cols=35 Identities=29% Similarity=0.838 Sum_probs=28.0
Q ss_pred CCCccccccCC--CCCeEEcccCCCccccHhHHhhhcC
Q 002251 193 GQICHQCRRND--RERVVWCVKCDKRGYCDSCISTWYS 228 (947)
Q Consensus 193 ~~~CHQCrqkt--~~~~v~C~~C~~~~FC~~CL~~rY~ 228 (947)
...|+.|+++= ..+.-.|+.|| ..||..|...+.+
T Consensus 161 ~~~C~~C~~~F~~~~rrhhCr~CG-~v~C~~Cs~~~~~ 197 (220)
T 1dvp_A 161 GRVCHRCRVEFTFTNRKHHCRNCG-QVFCGQCTAKQCP 197 (220)
T ss_dssp CSBCTTTCCBCCSSSCCEECTTTC-CEECSTTSCEEEE
T ss_pred CCccCCCCCccCCcccccccCCcC-CEEChHHhCCeee
Confidence 46899998764 34678999999 5999999988753
No 229
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=26.43 E-value=21 Score=30.63 Aligned_cols=33 Identities=21% Similarity=0.484 Sum_probs=26.5
Q ss_pred CCccccccCC--CCCeEEcccCCCccccHhHHhhhc
Q 002251 194 QICHQCRRND--RERVVWCVKCDKRGYCDSCISTWY 227 (947)
Q Consensus 194 ~~CHQCrqkt--~~~~v~C~~C~~~~FC~~CL~~rY 227 (947)
..|..|+++= ..+.-.|+.|+ +.||..|..++.
T Consensus 12 ~~C~~C~~~F~~~~RrHHCR~CG-~v~C~~Cs~~~~ 46 (73)
T 1vfy_A 12 DACMICSKKFSLLNRKHHCRSCG-GVFCQEHSSNSI 46 (73)
T ss_dssp SBCTTTCCBCBTTBCCEECTTTC-CEECGGGSCEEE
T ss_pred CcccCCCCccCCccccccCCCCC-EEEcccccCCeE
Confidence 4799999764 34678999999 599999997764
No 230
>2o35_A Hypothetical protein DUF1244; helix bundle, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.12A {Sinorhizobium meliloti} SCOP: a.293.1.1
Probab=26.18 E-value=19 Score=33.68 Aligned_cols=13 Identities=46% Similarity=1.671 Sum_probs=11.9
Q ss_pred cccHhHHhhhcCC
Q 002251 217 GYCDSCISTWYSD 229 (947)
Q Consensus 217 ~FC~~CL~~rY~e 229 (947)
.||..||.+||.+
T Consensus 42 GFCRNCLskWy~~ 54 (105)
T 2o35_A 42 GFCRNCLSNWYRE 54 (105)
T ss_dssp SCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 5999999999985
No 231
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=26.18 E-value=18 Score=37.33 Aligned_cols=35 Identities=29% Similarity=0.738 Sum_probs=27.6
Q ss_pred CCCccccccCC--CCCeEEcccCCCccccHhHHhhhcC
Q 002251 193 GQICHQCRRND--RERVVWCVKCDKRGYCDSCISTWYS 228 (947)
Q Consensus 193 ~~~CHQCrqkt--~~~~v~C~~C~~~~FC~~CL~~rY~ 228 (947)
...|..|+++= ..+.-.|++|+ ..||..|..++-+
T Consensus 164 ~~~C~~C~~~F~~~~RrhHCR~CG-~v~C~~Cs~~~~~ 200 (226)
T 3zyq_A 164 AEECHRCRVQFGVMTRKHHCRACG-QIFCGKCSSKYST 200 (226)
T ss_dssp CSBCTTTCCBCBTTBCCEECTTTC-CEECTTTCCEEEE
T ss_pred CCCCcCcCCCCCccccccccCCCc-CEeChhhcCCccc
Confidence 45899998755 34678999999 5999999987643
No 232
>3fyb_A Protein of unknown function (DUF1244); hydrocar degrading, structural genomics, PSI-2; HET: PEG; 1.80A {Alcanivorax borkumensis SK2}
Probab=25.89 E-value=19 Score=33.58 Aligned_cols=13 Identities=23% Similarity=1.237 Sum_probs=11.8
Q ss_pred cccHhHHhhhcCC
Q 002251 217 GYCDSCISTWYSD 229 (947)
Q Consensus 217 ~FC~~CL~~rY~e 229 (947)
.||..||.+||.+
T Consensus 41 GFCRNCLskWy~~ 53 (104)
T 3fyb_A 41 DFCRNCLAKWLME 53 (104)
T ss_dssp SCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 5999999999985
No 233
>2pzo_E CAP-Gly domain-containing linker protein 1; structural protein microtubule binding, dynactin, cytoskeleton associated protein, P150glued; 2.60A {Homo sapiens} PDB: 3e2u_E
Probab=25.59 E-value=17 Score=29.03 Aligned_cols=12 Identities=33% Similarity=1.005 Sum_probs=7.0
Q ss_pred cccccccCCCcc
Q 002251 316 ADEQMCCNICRI 327 (947)
Q Consensus 316 ~DERvyCDnCkT 327 (947)
..||.|||+|-+
T Consensus 17 ~~eRpYCd~CEv 28 (42)
T 2pzo_E 17 GEERPYCEICEM 28 (42)
T ss_dssp ----CEETTTTE
T ss_pred ccCCcccccccc
Confidence 378999999964
No 234
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=24.74 E-value=36 Score=32.89 Aligned_cols=73 Identities=15% Similarity=0.360 Sum_probs=44.6
Q ss_pred hhhhhhhhhhhhhhhhhhhhhhhccccccccccccCcccccccCCCcccc-c--cccccCCCCCcchhhhhhHHhhh
Q 002251 280 AVLPVVKQIHQIQCSEVELEKKLRGNEIDLARAKLSADEQMCCNICRIPI-I--DYHRHCGNCMYDLCLSCCQDLRE 353 (947)
Q Consensus 280 ~lLP~Lkqi~~EQ~~E~EiEAkIqG~~i~i~~a~~~~DERvyCDnCkTSI-v--D~HRSCp~CsYDLCLsCC~ELR~ 353 (947)
.+|.||..-.+++..|.|.=.+++..-.++.+. ...+..-.|.+|..+. | +--+-|..|.+..|-.|+-....
T Consensus 17 ~Il~Vl~Rd~~l~~~E~~ri~kL~~~l~~~k~~-~~~~~~~~C~~C~~~~g~l~~~g~~C~~C~~~VC~~C~~~~~~ 92 (134)
T 1zbd_B 17 IINRVIARAEKMETMEQERIGRLVDRLETMRKN-VAGDGVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCGVETSN 92 (134)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CCSCSSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSEEECCC
T ss_pred HHHHHHhhHHHHHHhHHHHHHHHHHHHHHHHHH-hccCCCccccccCCCcccccCCCCCCCCCCcccccccCCccCC
Confidence 456677766665555544322332210111211 2235567899998876 3 56789999999999999876643
No 235
>2cs3_A Protein C14ORF4, MY039 protein; ZF-C3HC4 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.3
Probab=24.74 E-value=77 Score=28.74 Aligned_cols=35 Identities=20% Similarity=0.544 Sum_probs=27.9
Q ss_pred cCCCCccccccCCCC-CeEEcccCCCccccHhHHhh
Q 002251 191 TGGQICHQCRRNDRE-RVVWCVKCDKRGYCDSCIST 225 (947)
Q Consensus 191 ~~~~~CHQCrqkt~~-~~v~C~~C~~~~FC~~CL~~ 225 (947)
.....|+-|+..--+ -.|.|-+-.-.+||.+|-+.
T Consensus 13 ~a~l~CtlC~erLEdtHFVQCPsv~~HkFCFpCsr~ 48 (93)
T 2cs3_A 13 SGPLCCTICHERLEDTHFVQCPSVPSHKFCFPCSRE 48 (93)
T ss_dssp CCSCCCSSSCSCCSSTTSEECSSCSSCEECHHHHHH
T ss_pred CCeeEeecchhhhccCceeeCCCccCCeeeccccHH
Confidence 367899999877644 58999987767899999764
No 236
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=24.73 E-value=27 Score=31.32 Aligned_cols=31 Identities=26% Similarity=0.647 Sum_probs=28.1
Q ss_pred ccccCCCccccccccccCCCCCcchhhhhhH
Q 002251 319 QMCCNICRIPIIDYHRHCGNCMYDLCLSCCQ 349 (947)
Q Consensus 319 RvyCDnCkTSIvD~HRSCp~CsYDLCLsCC~ 349 (947)
...||.|...+..+-=.|..|.|+|=+.|-.
T Consensus 47 ~~~C~~C~~~~~~~~Y~C~~C~f~lH~~Ca~ 77 (89)
T 1v5n_A 47 VYTCDKCEEEGTIWSYHCDECDFDLHAKCAL 77 (89)
T ss_dssp SCCCTTTSCCCCSCEEECTTTCCCCCHHHHH
T ss_pred CeEeCCCCCcCCCcEEEcCCCCCeEcHHhcC
Confidence 3569999999999999999999999999975
No 237
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=24.52 E-value=30 Score=39.85 Aligned_cols=34 Identities=15% Similarity=0.041 Sum_probs=25.1
Q ss_pred ecCceEEecCCCccccccccccceeeccccCCCC
Q 002251 832 HLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPES 865 (947)
Q Consensus 832 ~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEn 865 (947)
+.||+|.||||.||=.-|.-.-==+++-++.|=|
T Consensus 150 ~~GDvi~iPaG~~~~~~N~g~e~L~~l~~~d~~n 183 (466)
T 3kgl_A 150 RTGDTIATHPGVAQWFYNDGNQPLVIVSVLDLAS 183 (466)
T ss_dssp ETTEEEEECTTCEEEEECCSSSCEEEEEEEESSS
T ss_pred cCCCEEEECCCCcEEEEeCCCCcEEEEEEEcCCC
Confidence 4699999999999999998754444444444443
No 238
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=23.77 E-value=18 Score=41.86 Aligned_cols=118 Identities=10% Similarity=0.077 Sum_probs=61.5
Q ss_pred CCCceeeeeccCCChhHHHHHHHHHHHHhCCCCCCCCCcccCCCcCcceecCHHH-HHHHHHHhCccceEEEeecCceEE
Q 002251 760 THPGAHWDVFRRQDVPKLIEYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDH-KRKLKEEFGVEPWSFEQHLGEAVF 838 (947)
Q Consensus 760 ~~~GAlWDIFrreDv~KLreyL~kh~~Ef~~~~~~~~~~v~hPIHDQ~fYLd~~h-k~rLkEEyGVepWtf~Q~lGEAVF 838 (947)
..+|.+.-+... +.|-|... ..-...+...-......-.||=.++.+|+..-. +..+-.+.|-+-.+..=..||.++
T Consensus 346 ~~gG~v~~~~~~-~~P~L~~l-gls~a~v~l~pG~~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~g~~~~~~~l~~GDv~v 423 (493)
T 2d5f_A 346 PKAGRISTLNSL-TLPALRQF-GLSAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVNAQGNAVFDGELRRGQLLV 423 (493)
T ss_dssp TTTEEEEEESTT-TSTTHHHH-TCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEE
T ss_pred CCCeEEEEeccc-cCcccccc-ceEEEEEEccCCceeeeeECCCCCEEEEEEeceEEEEEEcCCCCEEEeEEEcCCCEEE
Confidence 457778777654 67777532 111111111111111113678777877776542 111111222222333457899999
Q ss_pred ecCCCccccccccccceeeccccCCCCHHHHHHHHHHHhcCCC
Q 002251 839 IPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPN 881 (947)
Q Consensus 839 IPAGCPHQVRNLkSCIKVAlDFVSPEnV~eC~rLteEfR~Lp~ 881 (947)
||+|.||...|...-..+..=|.|+..-..- |+.=|+.+|.
T Consensus 424 vP~G~~H~~~n~~e~~~~l~~~ts~~p~~~~--l~s~~~~~p~ 464 (493)
T 2d5f_A 424 VPQNFVVAEQGGEQGLEYVVFKTHHNAVSSY--IKDVFRAIPS 464 (493)
T ss_dssp ECTTCEEEEEEEEEEEEEEEEESSTTCCEEE--HHHHHHHSCH
T ss_pred ECCCCeEeeeeCCCCEEEEEEECCCCCccee--HHHHHHhCCH
Confidence 9999999999975444443333333221111 2666777875
No 239
>2hqh_E Restin; beta/BETA structure, zinc finger motif, structural protein, binding; 1.80A {Homo sapiens}
Probab=23.39 E-value=20 Score=26.02 Aligned_cols=9 Identities=33% Similarity=1.003 Sum_probs=5.6
Q ss_pred cccccCCCc
Q 002251 318 EQMCCNICR 326 (947)
Q Consensus 318 ERvyCDnCk 326 (947)
+|.||++|-
T Consensus 2 ~RpYCe~CE 10 (26)
T 2hqh_E 2 SRPYCEICE 10 (26)
T ss_dssp --CEETTTT
T ss_pred CCccchHHH
Confidence 688888885
No 240
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=23.37 E-value=37 Score=39.09 Aligned_cols=34 Identities=15% Similarity=0.174 Sum_probs=25.8
Q ss_pred ecCceEEecCCCccccccccccceeeccccCCCC
Q 002251 832 HLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPES 865 (947)
Q Consensus 832 ~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEn 865 (947)
+.||+|+||||.+|=.-|--+-==|++-++.|-|
T Consensus 135 ~~GDvi~iPaG~~hw~~N~G~~~lv~v~~~d~~n 168 (465)
T 3qac_A 135 REGDIFAMPAGVSHWAYNNGDQPLVAVILIDTAN 168 (465)
T ss_dssp ETTEEEEECTTCEEEEECCSSSCEEEEEEECTTS
T ss_pred cCCCEEEECCCCeEEEEcCCCCCEEEEEEEcCCC
Confidence 5799999999999999998765455555555444
No 241
>1wys_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=23.22 E-value=61 Score=28.65 Aligned_cols=35 Identities=29% Similarity=0.483 Sum_probs=28.1
Q ss_pred CcCCCCccc--cccCCCCCeEEcccCCCccccHhHHhhhcCC
Q 002251 190 DTGGQICHQ--CRRNDRERVVWCVKCDKRGYCDSCISTWYSD 229 (947)
Q Consensus 190 ~~~~~~CHQ--Crqkt~~~~v~C~~C~~~~FC~~CL~~rY~e 229 (947)
-..++.|.- |++++. ..+.|..|+ +.||. .-||++
T Consensus 11 ~~~g~~Cs~~~C~~~df-lpf~C~~C~-~~FC~---~HR~~e 47 (75)
T 1wys_A 11 LDIGQHCQVQHCRQRDF-LPFVCDGCS-GIFCL---EHRSKD 47 (75)
T ss_dssp CCCCCCCSCTTTCCCSC-CCEECTTTC-CEECS---TTCSSG
T ss_pred cccCCCcCcccCCCccc-eeeECcccC-cCcCc---ccCCcc
Confidence 357899999 999987 477999999 58985 667765
No 242
>2dj8_A Protein CBFA2T1; zinc finger MYND domain, protein MTG8, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.85.1.1
Probab=22.94 E-value=57 Score=26.84 Aligned_cols=32 Identities=25% Similarity=0.717 Sum_probs=24.6
Q ss_pred cCCCCccccccCCCCCeEEcccCCCccccH-hHHhh
Q 002251 191 TGGQICHQCRRNDRERVVWCVKCDKRGYCD-SCIST 225 (947)
Q Consensus 191 ~~~~~CHQCrqkt~~~~v~C~~C~~~~FC~-~CL~~ 225 (947)
.....|+.|.+. ....|+.|+...||. .|-..
T Consensus 13 ~~~~~C~~C~~~---~~~~Cs~C~~v~YCs~~CQ~~ 45 (60)
T 2dj8_A 13 DSSESCWNCGRK---ASETCSGCNTARYCGSFCQHK 45 (60)
T ss_dssp CCSCCCSSSCSC---CCEECTTTSCCEESSHHHHHH
T ss_pred CCCcccccCCCC---CcccCCCCCCEeeeCHHHHHH
Confidence 356799999973 467999999888995 56544
No 243
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.93 E-value=19 Score=32.42 Aligned_cols=51 Identities=29% Similarity=0.683 Sum_probs=36.1
Q ss_pred cCCCCccccccCC-CCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002251 191 TGGQICHQCRRND-RERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (947)
Q Consensus 191 ~~~~~CHQCrqkt-~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (947)
.....|..|++.. .+.++.|-.|.+ .|=..||..--.++. .-.|.||.|+.
T Consensus 14 ~~~~~C~vC~~~~~~~~ll~CD~C~~-~~H~~Cl~Ppl~~~P--~g~W~C~~C~~ 65 (92)
T 2e6r_A 14 IDSYICQVCSRGDEDDKLLFCDGCDD-NYHIFCLLPPLPEIP--RGIWRCPKCIL 65 (92)
T ss_dssp CCCCCCSSSCCSGGGGGCEECTTTCC-EECSSSSSSCCSSCC--SSCCCCHHHHH
T ss_pred cCCCCCccCCCcCCCCCEEEcCCCCc-hhccccCCCCcccCC--CCCcCCccCcC
Confidence 4667899999887 457999999995 677777753222222 23799999853
No 244
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=22.49 E-value=19 Score=31.64 Aligned_cols=51 Identities=18% Similarity=0.444 Sum_probs=32.3
Q ss_pred CCCccccccCCCCC-eEEcccCCCccccHhHHhhhcCCCchhh--hhhcCCC--CCC
Q 002251 193 GQICHQCRRNDRER-VVWCVKCDKRGYCDSCISTWYSDIPLEE--LEKVCPA--CRG 244 (947)
Q Consensus 193 ~~~CHQCrqkt~~~-~v~C~~C~~~~FC~~CL~~rY~e~~~ed--v~~~CP~--Crg 244 (947)
..+|-=|...-... .+.-..|+ ..||..||..+......+. ....||. |+.
T Consensus 5 ~~~C~IC~~~~~~~~~~~l~~Cg-H~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~ 60 (94)
T 1wim_A 5 SSGCKLCLGEYPVEQMTTIAQCQ-CIFCTLCLKQYVELLIKEGLETAISCPDAACPK 60 (94)
T ss_dssp BCCCSSSCCCCBGGGEEEETTTT-EEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSS
T ss_pred CcCCcccCcccccccceEcCCCC-CcccHHHHHHHHHHHhhcCCcccccCccccCCC
Confidence 34677777554333 33444688 5899999998875422222 2478998 775
No 245
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=21.86 E-value=66 Score=32.55 Aligned_cols=47 Identities=23% Similarity=0.629 Sum_probs=32.7
Q ss_pred CCCccccccCCCC-----CeEEcccCCCccccHhHHhhhcCCCchh----------hhhhcCCCCCCc
Q 002251 193 GQICHQCRRNDRE-----RVVWCVKCDKRGYCDSCISTWYSDIPLE----------ELEKVCPACRGS 245 (947)
Q Consensus 193 ~~~CHQCrqkt~~-----~~v~C~~C~~~~FC~~CL~~rY~e~~~e----------dv~~~CP~Crg~ 245 (947)
|..|--|++.-.. ..+.|-.|++ -|=+.|.. ++.+ +..|.||.|+..
T Consensus 2 G~~CpiC~k~Y~~~~~~~~MIqCd~C~~-W~H~~Cvg-----i~~~~~e~~~~~pe~~~y~Cp~C~~~ 63 (183)
T 3lqh_A 2 GNFCPLCDKCYDDDDYESKMMQCGKCDR-WVHSKCEN-----LSDEMYEILSNLPESVAYTCVNCTER 63 (183)
T ss_dssp CCBCTTTCCBCTTCCTTCCEEECTTTCC-EEEGGGSS-----CCHHHHHHHHHSHHHHCCCCTTTCCS
T ss_pred cCcCCCCcCccCCcccCCCeEECCCCCc-ccchhccc-----cCHHHHHHhhcCCCCCeeECcCCCCC
Confidence 6678888876432 3899999994 66667762 3432 236999999874
No 246
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=21.18 E-value=45 Score=37.20 Aligned_cols=30 Identities=10% Similarity=0.174 Sum_probs=25.1
Q ss_pred cceEEEeecCceEEecCCCccccccccccc
Q 002251 825 EPWSFEQHLGEAVFIPAGCPFQVRNLQSTV 854 (947)
Q Consensus 825 epWtf~Q~lGEAVFIPAGCPHQVRNLkSCI 854 (947)
.+=+|.=..||++.||+|++||..|...|+
T Consensus 315 ~~~~~~w~~gD~fvvP~w~~h~~~n~~~a~ 344 (368)
T 3nw4_A 315 NGETTKLEKGDMFVVPSWVPWSLQAETQFD 344 (368)
T ss_dssp TTEEEEECTTCEEEECTTCCEEEEESSSEE
T ss_pred CCEEEEecCCCEEEECCCCcEEEEeCCCEE
Confidence 345677889999999999999999976554
No 247
>1x4v_A Hypothetical protein LOC130617; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.93 E-value=66 Score=27.56 Aligned_cols=35 Identities=23% Similarity=0.546 Sum_probs=28.0
Q ss_pred cCCCCccc--cccCCCCCeEEcccCCCccccHhHHhhhcCCC
Q 002251 191 TGGQICHQ--CRRNDRERVVWCVKCDKRGYCDSCISTWYSDI 230 (947)
Q Consensus 191 ~~~~~CHQ--Crqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~ 230 (947)
+.+..|-. |++++.- .+.|..|+ +.|| +.-||++.
T Consensus 10 ~~~~~Cs~~~Ck~~~ll-~f~C~~C~-~~FC---~~HR~~e~ 46 (63)
T 1x4v_A 10 IFTNKCERAGCRQREMM-KLTCERCS-RNFC---IKHRHPLD 46 (63)
T ss_dssp TTCCCCCSTTCCCCCSS-CCBCSSSC-CBCC---HHHHSTTS
T ss_pred ccCCCCCccCCCCCCcc-ceECCCCC-cccC---cccCCccC
Confidence 57889998 9999763 56899999 5887 58899874
No 248
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=20.16 E-value=25 Score=32.84 Aligned_cols=32 Identities=25% Similarity=0.646 Sum_probs=21.8
Q ss_pred CCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002251 204 RERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (947)
Q Consensus 204 ~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (947)
.++++.|. -.||..|+..|..+ -...||.|+.
T Consensus 14 ygRmIPCk----HvFCydCa~~~~~~-----~~k~Cp~C~~ 45 (101)
T 3vk6_A 14 YGRMIPCK----HVFCYDCAILHEKK-----GDKMCPGCSD 45 (101)
T ss_dssp EEEEETTC----CEEEHHHHHHHHHT-----TCCBCTTTCC
T ss_pred Eeeecccc----ccHHHHHHHHHHhc-----cCCCCcCcCC
Confidence 34556654 58999999876422 1248999986
No 249
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=20.06 E-value=82 Score=32.91 Aligned_cols=48 Identities=21% Similarity=0.509 Sum_probs=36.7
Q ss_pred CCCCccccccCCCCCeEEcccCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002251 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (947)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~~~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (947)
.-..|..|+.--. .-..|.+|+ .+|=..|+.+|.... ..-.||.|...
T Consensus 179 ~i~~C~iC~~iv~-~g~~C~~C~-~~~H~~C~~~~~~~~----~~~~CP~C~~~ 226 (238)
T 3nw0_A 179 AVKICNICHSLLI-QGQSCETCG-IRMHLPCVAKYFQSN----AEPRCPHCNDY 226 (238)
T ss_dssp TCCBCTTTCSBCS-SCEECSSSC-CEECHHHHHHHTTTC----SSCBCTTTCCB
T ss_pred CCCcCcchhhHHh-CCcccCccC-hHHHHHHHHHHHHhC----CCCCCCCCCCC
Confidence 3678999997665 357999999 589999999998641 24589988763
Done!