Query 002255
Match_columns 947
No_of_seqs 819 out of 6289
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 18:53:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002255.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002255hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aoj_A High affinity nerve gro 100.0 1.3E-52 4.4E-57 457.5 22.6 261 590-874 41-319 (329)
2 4asz_A BDNF/NT-3 growth factor 100.0 4.1E-53 1.4E-57 454.9 18.2 262 590-874 13-289 (299)
3 3omv_A RAF proto-oncogene seri 100.0 1.8E-52 6.1E-57 449.6 23.1 261 590-876 36-302 (307)
4 4gt4_A Tyrosine-protein kinase 100.0 1.7E-52 5.7E-57 452.2 18.3 261 590-872 26-304 (308)
5 4b9d_A Serine/threonine-protei 100.0 1.7E-52 5.9E-57 455.7 13.4 252 590-867 24-276 (350)
6 4aw0_A HPDK1, 3-phosphoinositi 100.0 2.1E-51 7.3E-56 439.6 17.8 262 590-878 32-295 (311)
7 4fih_A Serine/threonine-protei 100.0 7.7E-51 2.6E-55 442.0 20.2 250 589-867 73-323 (346)
8 4g3f_A NF-kappa-beta-inducing 100.0 9.9E-51 3.4E-55 440.0 19.8 254 590-874 58-316 (336)
9 3fpq_A Serine/threonine-protei 100.0 3.6E-50 1.2E-54 428.5 22.6 246 593-867 29-282 (290)
10 4ase_A Vascular endothelial gr 100.0 5.6E-50 1.9E-54 440.1 19.9 271 584-875 58-348 (353)
11 4fie_A Serine/threonine-protei 100.0 1.2E-49 4E-54 443.4 21.0 250 589-867 150-400 (423)
12 3hyh_A Carbon catabolite-derep 100.0 3.3E-49 1.1E-53 417.2 21.1 247 590-867 13-262 (275)
13 3hmm_A TGF-beta receptor type- 100.0 3.5E-49 1.2E-53 427.7 20.1 273 590-874 3-297 (303)
14 3ubd_A Ribosomal protein S6 ki 100.0 9.8E-50 3.4E-54 427.1 13.4 245 590-863 24-272 (304)
15 4g31_A Eukaryotic translation 100.0 1.1E-47 3.6E-52 413.7 20.8 252 590-867 5-279 (299)
16 3rgz_A Protein brassinosteroid 100.0 5.5E-46 1.9E-50 457.2 26.3 91 367-457 653-746 (768)
17 4b99_A Mitogen-activated prote 100.0 1.4E-45 4.6E-50 412.6 24.2 270 589-867 53-344 (398)
18 4f9c_A Cell division cycle 7-r 100.0 2E-45 6.8E-50 407.1 20.2 205 583-802 14-251 (361)
19 4eco_A Uncharacterized protein 100.0 2.5E-44 8.5E-49 432.3 19.4 417 25-453 27-602 (636)
20 2qkw_B Protein kinase; three-h 100.0 5.3E-44 1.8E-48 393.6 18.3 283 584-874 33-315 (321)
21 3v5w_A G-protein coupled recep 100.0 1.3E-43 4.3E-48 411.8 22.1 250 590-867 189-449 (689)
22 3uto_A Twitchin; kinase, muscl 100.0 1.6E-43 5.4E-48 415.8 23.3 258 588-879 155-416 (573)
23 4ecn_A Leucine-rich repeat pro 100.0 3.6E-43 1.2E-47 428.4 26.0 393 25-438 266-802 (876)
24 3p86_A Serine/threonine-protei 100.0 1.3E-42 4.3E-47 379.6 20.9 265 588-877 35-301 (309)
25 3uim_A Brassinosteroid insensi 100.0 1.2E-42 4.2E-47 383.7 18.1 290 578-872 18-309 (326)
26 2psq_A Fibroblast growth facto 100.0 5.4E-42 1.9E-46 384.3 23.0 265 589-875 80-365 (370)
27 3soc_A Activin receptor type-2 100.0 2.9E-42 9.9E-47 379.6 20.2 272 590-875 24-319 (322)
28 1ogq_A PGIP-2, polygalacturona 100.0 1E-41 3.6E-46 372.9 22.9 293 24-433 2-307 (313)
29 2nru_A Interleukin-1 receptor- 100.0 9.1E-41 3.1E-45 365.4 28.5 285 578-873 13-305 (307)
30 3fe3_A MAP/microtubule affinit 100.0 1.8E-41 6.2E-46 373.0 22.6 249 589-867 14-264 (328)
31 3fxz_A Serine/threonine-protei 100.0 3E-41 1E-45 366.8 23.3 251 588-867 18-269 (297)
32 3s95_A LIMK-1, LIM domain kina 100.0 5.9E-41 2E-45 367.4 23.6 263 590-877 10-285 (310)
33 3kul_A Ephrin type-A receptor 100.0 3.3E-41 1.1E-45 371.4 21.4 261 589-875 48-314 (325)
34 3cbl_A C-FES, proto-oncogene t 100.0 1.2E-41 4E-46 383.0 17.6 261 589-875 113-375 (377)
35 3zgw_A Maternal embryonic leuc 100.0 3.7E-41 1.3E-45 372.5 20.5 253 587-868 7-261 (347)
36 3tki_A Serine/threonine-protei 100.0 6.8E-41 2.3E-45 368.4 21.7 254 589-867 6-261 (323)
37 2c30_A Serine/threonine-protei 100.0 1.8E-40 6.3E-45 364.8 24.2 260 579-867 24-294 (321)
38 2yab_A Death-associated protei 100.0 1.6E-40 5.5E-45 369.8 24.0 253 588-867 10-272 (361)
39 4hcu_A Tyrosine-protein kinase 100.0 5.3E-41 1.8E-45 359.8 19.4 256 590-874 10-266 (269)
40 3lb7_A RAF proto-oncogene seri 100.0 1E-40 3.6E-45 364.2 22.0 265 589-876 35-302 (307)
41 3tt0_A Basic fibroblast growth 100.0 1E-40 3.5E-45 376.3 22.4 267 589-877 68-355 (382)
42 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.2E-40 4E-45 356.8 21.5 257 589-874 7-264 (268)
43 2izr_A Casein kinase I isoform 100.0 1E-40 3.5E-45 368.8 21.2 275 589-887 8-294 (330)
44 2qol_A Ephrin receptor; recept 100.0 5E-41 1.7E-45 376.7 18.5 260 589-874 44-309 (373)
45 1tki_A Titin; serine kinase, m 100.0 1.9E-40 6.4E-45 364.4 22.6 251 588-867 3-257 (321)
46 1luf_A Muscle-specific tyrosin 100.0 6.6E-41 2.2E-45 372.7 19.0 270 586-877 43-338 (343)
47 2ivs_A Proto-oncogene tyrosine 100.0 1.2E-40 4.1E-45 365.7 20.8 265 589-875 22-312 (314)
48 3vhe_A Vascular endothelial gr 100.0 3.6E-41 1.2E-45 377.4 16.9 273 582-875 14-356 (359)
49 3soa_A Calcium/calmodulin-depe 100.0 2E-40 6.7E-45 378.8 22.9 255 587-867 8-267 (444)
50 3l9p_A Anaplastic lymphoma kin 100.0 4E-41 1.4E-45 377.0 16.8 265 589-875 70-346 (367)
51 2bdw_A Hypothetical protein K1 100.0 1.7E-40 5.8E-45 370.8 21.8 255 587-868 26-285 (362)
52 3c0i_A Peripheral plasma membr 100.0 1.7E-40 5.9E-45 369.6 21.4 257 588-867 22-286 (351)
53 1o6l_A RAC-beta serine/threoni 100.0 2.8E-40 9.7E-45 364.4 22.8 249 590-867 5-260 (337)
54 1csn_A Casein kinase-1; phosph 100.0 2.8E-40 9.4E-45 359.9 22.4 275 589-886 9-295 (298)
55 4eqm_A Protein kinase; transfe 100.0 4.4E-40 1.5E-44 357.2 23.8 263 589-874 10-275 (294)
56 3qup_A Tyrosine-protein kinase 100.0 1.1E-40 3.7E-45 367.6 19.1 266 588-874 21-298 (323)
57 3poz_A Epidermal growth factor 100.0 1.1E-40 3.8E-45 367.8 18.8 258 590-874 15-278 (327)
58 3gen_A Tyrosine-protein kinase 100.0 2.2E-40 7.6E-45 357.8 19.7 257 589-874 23-280 (283)
59 3niz_A Rhodanese family protei 100.0 5.5E-40 1.9E-44 359.4 22.8 270 588-867 19-300 (311)
60 1t46_A HOMO sapiens V-KIT hard 100.0 2.9E-40 9.8E-45 362.5 20.5 266 589-875 22-308 (313)
61 3ugc_A Tyrosine-protein kinase 100.0 8.3E-41 2.8E-45 363.4 15.4 273 589-875 9-292 (295)
62 3op5_A Serine/threonine-protei 100.0 3.4E-40 1.2E-44 369.7 20.6 284 588-887 33-342 (364)
63 2pvf_A Fibroblast growth facto 100.0 6.3E-40 2.2E-44 363.1 22.1 267 589-877 34-321 (334)
64 3dbq_A Dual specificity protei 100.0 1.8E-40 6.3E-45 368.6 17.8 254 589-868 8-274 (343)
65 3txo_A PKC-L, NPKC-ETA, protei 100.0 2.5E-40 8.7E-45 367.3 18.8 250 589-867 22-280 (353)
66 3q4u_A Activin receptor type-1 100.0 7E-40 2.4E-44 357.3 22.0 261 588-872 6-300 (301)
67 1qcf_A Haematopoetic cell kina 100.0 2E-40 6.7E-45 382.3 18.5 258 588-874 186-444 (454)
68 3og7_A AKAP9-BRAF fusion prote 100.0 3.5E-40 1.2E-44 357.3 18.8 263 589-874 23-288 (289)
69 2y0a_A Death-associated protei 100.0 1E-39 3.5E-44 359.6 22.8 253 588-867 9-271 (326)
70 3p1a_A MYT1 kinase, membrane-a 100.0 8.9E-40 3E-44 357.8 21.9 248 588-867 55-304 (311)
71 1rjb_A FL cytokine receptor; k 100.0 2.8E-40 9.5E-45 367.8 17.9 266 588-874 43-334 (344)
72 3qd2_B Eukaryotic translation 100.0 1.1E-39 3.8E-44 361.0 22.4 254 588-867 4-325 (332)
73 1mp8_A Focal adhesion kinase 1 100.0 6.2E-40 2.1E-44 353.8 19.7 259 589-875 14-277 (281)
74 3kmu_A ILK, integrin-linked ki 100.0 5.7E-40 1.9E-44 352.1 19.0 254 590-874 10-270 (271)
75 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 4.3E-40 1.5E-44 379.0 19.2 258 589-875 183-441 (452)
76 2zv2_A Calcium/calmodulin-depe 100.0 9.3E-40 3.2E-44 355.7 20.8 250 590-867 13-292 (298)
77 2zmd_A Dual specificity protei 100.0 6.3E-40 2.2E-44 370.0 19.8 253 590-868 56-321 (390)
78 4euu_A Serine/threonine-protei 100.0 4.1E-39 1.4E-43 354.2 25.8 275 589-873 8-308 (319)
79 1opk_A P150, C-ABL, proto-onco 100.0 3.4E-40 1.1E-44 383.9 18.0 257 589-873 219-477 (495)
80 4dc2_A Protein kinase C IOTA t 100.0 1.2E-39 4.1E-44 365.8 21.8 254 589-862 51-307 (396)
81 1fot_A TPK1 delta, CAMP-depend 100.0 1.5E-39 5.1E-44 356.1 21.8 246 590-867 6-258 (318)
82 3dtc_A Mitogen-activated prote 100.0 7.2E-40 2.5E-44 351.4 19.0 256 589-872 6-271 (271)
83 3brb_A Proto-oncogene tyrosine 100.0 1.1E-39 3.8E-44 357.8 20.6 267 588-875 32-309 (313)
84 3lzb_A Epidermal growth factor 100.0 7E-40 2.4E-44 361.1 19.0 258 590-874 15-278 (327)
85 2eva_A TAK1 kinase - TAB1 chim 100.0 1.1E-39 3.9E-44 356.3 20.2 258 590-877 8-266 (307)
86 1k9a_A Carboxyl-terminal SRC k 100.0 1.4E-39 4.8E-44 374.5 22.0 252 589-874 192-445 (450)
87 4aw2_A Serine/threonine-protei 100.0 2.6E-40 9E-45 376.2 15.7 262 582-867 66-338 (437)
88 1kob_A Twitchin; kinase, intra 100.0 2.2E-39 7.5E-44 363.9 22.8 252 588-867 49-304 (387)
89 1ob3_A PFPK5, cell division co 100.0 4.2E-40 1.4E-44 356.5 16.4 266 590-867 2-280 (288)
90 4f0f_A Serine/threonine-protei 100.0 1.9E-39 6.5E-44 351.2 21.5 254 590-872 19-287 (287)
91 3t9t_A Tyrosine-protein kinase 100.0 8E-40 2.7E-44 350.2 18.3 256 590-874 8-264 (267)
92 3gni_B Strad alpha; kinase fol 100.0 1.9E-39 6.5E-44 367.2 22.3 270 590-867 25-333 (389)
93 3o0g_A Cell division protein k 100.0 2E-39 6.9E-44 351.9 21.2 267 590-867 2-282 (292)
94 3kex_A Receptor tyrosine-prote 100.0 2.6E-40 9E-45 364.6 14.3 258 590-874 13-276 (325)
95 4fr4_A YANK1, serine/threonine 100.0 1.5E-39 5.1E-44 363.9 20.5 251 590-867 15-271 (384)
96 4hgt_A Casein kinase I isoform 100.0 2.6E-39 8.8E-44 351.9 21.9 277 587-886 6-292 (296)
97 1xjd_A Protein kinase C, theta 100.0 8.4E-40 2.9E-44 361.6 18.1 250 588-866 15-268 (345)
98 3kk8_A Calcium/calmodulin depe 100.0 4E-39 1.4E-43 348.1 23.0 253 588-867 4-261 (284)
99 1rdq_E PKA C-alpha, CAMP-depen 100.0 2.1E-39 7.1E-44 359.7 21.3 246 590-867 41-293 (350)
100 2vd5_A DMPK protein; serine/th 100.0 4.8E-40 1.7E-44 371.4 16.3 261 582-867 53-327 (412)
101 2xir_A Vascular endothelial gr 100.0 9.3E-40 3.2E-44 359.0 18.2 275 582-877 19-313 (316)
102 3v8s_A RHO-associated protein 100.0 2.5E-40 8.7E-45 373.5 13.9 258 583-867 62-329 (410)
103 3oz6_A Mitogen-activated prote 100.0 2E-39 6.9E-44 366.7 21.1 270 586-867 5-328 (388)
104 3kfa_A Tyrosine-protein kinase 100.0 1.2E-39 3.9E-44 353.1 18.2 259 588-874 11-271 (288)
105 1qpc_A LCK kinase; alpha beta 100.0 1.9E-39 6.4E-44 349.8 19.7 258 589-875 12-270 (279)
106 3lxp_A Non-receptor tyrosine-p 100.0 1.5E-39 5E-44 357.4 19.0 275 590-877 30-313 (318)
107 3ttj_A Mitogen-activated prote 100.0 4.2E-39 1.4E-43 371.0 23.3 264 588-867 60-355 (464)
108 3a8x_A Protein kinase C IOTA t 100.0 4.9E-39 1.7E-43 356.2 23.0 253 590-862 9-264 (345)
109 2i0e_A Protein kinase C-beta I 100.0 2.2E-39 7.4E-44 359.5 20.0 251 588-867 18-276 (353)
110 2wqm_A Serine/threonine-protei 100.0 4.6E-39 1.6E-43 352.4 22.4 270 589-879 31-302 (310)
111 2x4f_A Myosin light chain kina 100.0 3.3E-39 1.1E-43 361.7 21.6 245 595-867 94-342 (373)
112 1p4o_A Insulin-like growth fac 100.0 1.2E-39 4E-44 359.2 17.5 266 587-874 22-299 (322)
113 3uzp_A CKI-delta, CKID, casein 100.0 6.9E-39 2.4E-43 348.5 23.4 276 588-886 7-292 (296)
114 3hko_A Calcium/calmodulin-depe 100.0 3.8E-39 1.3E-43 358.8 21.8 264 585-867 21-330 (345)
115 1u59_A Tyrosine-protein kinase 100.0 4.8E-39 1.6E-43 348.0 21.9 261 590-877 9-275 (287)
116 1xbb_A Tyrosine-protein kinase 100.0 3.9E-39 1.3E-43 349.5 21.0 259 589-874 15-279 (291)
117 3a62_A Ribosomal protein S6 ki 100.0 3.9E-39 1.3E-43 355.1 21.3 250 589-867 16-276 (327)
118 2w4o_A Calcium/calmodulin-depe 100.0 2.2E-39 7.6E-44 360.2 19.4 257 587-879 50-311 (349)
119 2i1m_A Macrophage colony-stimu 100.0 9.7E-40 3.3E-44 361.6 16.4 266 589-875 45-327 (333)
120 3g2f_A Bone morphogenetic prot 100.0 1.5E-39 5.1E-44 360.7 17.9 280 589-880 12-324 (336)
121 3mdy_A Bone morphogenetic prot 100.0 1.5E-38 5.1E-43 352.8 25.9 269 583-875 30-332 (337)
122 3uc3_A Serine/threonine-protei 100.0 2E-39 6.7E-44 362.2 18.8 253 589-868 19-275 (361)
123 4agu_A Cyclin-dependent kinase 100.0 5.5E-39 1.9E-43 352.0 21.9 267 589-867 2-284 (311)
124 3is5_A Calcium-dependent prote 100.0 2.8E-39 9.7E-44 349.3 19.3 255 588-867 20-278 (285)
125 1mqb_A Ephrin type-A receptor 100.0 6.1E-39 2.1E-43 354.7 21.9 259 590-874 44-309 (333)
126 3ork_A Serine/threonine protei 100.0 1.5E-39 5.3E-44 356.1 16.9 261 588-872 10-279 (311)
127 3h4j_B AMPK kdaid, SNF1-like p 100.0 9.1E-40 3.1E-44 359.9 15.1 248 589-867 8-258 (336)
128 3e7e_A HBUB1, BUB1A, mitotic c 100.0 3.8E-39 1.3E-43 361.4 19.8 256 589-875 64-340 (365)
129 2pmi_A Negative RE, cyclin-dep 100.0 2.8E-39 9.5E-44 354.9 18.3 265 589-867 4-293 (317)
130 2yex_A Serine/threonine-protei 100.0 9.7E-39 3.3E-43 343.5 21.9 255 588-867 5-261 (276)
131 4e5w_A Tyrosine-protein kinase 100.0 1.4E-39 4.6E-44 355.2 15.4 270 590-873 21-301 (302)
132 3f3z_A Calcium/calmodulin-depe 100.0 1.1E-38 3.7E-43 343.4 22.2 251 587-867 6-261 (277)
133 2a2a_A Death-associated protei 100.0 1.1E-38 3.7E-43 351.1 22.6 253 588-867 10-272 (321)
134 2y94_A 5'-AMP-activated protei 100.0 7.5E-39 2.6E-43 367.9 22.1 248 590-867 16-266 (476)
135 2r5t_A Serine/threonine-protei 100.0 2.8E-39 9.5E-44 361.2 18.0 250 590-868 38-290 (373)
136 3cc6_A Protein tyrosine kinase 100.0 5.5E-39 1.9E-43 346.4 19.7 258 589-874 11-273 (281)
137 1u5q_A Serine/threonine protei 100.0 5.1E-39 1.7E-43 356.8 19.9 249 589-868 53-306 (348)
138 3c1x_A Hepatocyte growth facto 100.0 3.6E-39 1.2E-43 361.1 18.7 261 591-877 90-358 (373)
139 2h8h_A Proto-oncogene tyrosine 100.0 1.6E-39 5.4E-44 381.7 16.5 257 589-874 266-523 (535)
140 1nxk_A MAP kinase-activated pr 100.0 9.2E-39 3.1E-43 361.6 22.1 252 589-868 60-322 (400)
141 3lxl_A Tyrosine-protein kinase 100.0 3.6E-39 1.2E-43 356.0 17.9 273 590-874 23-303 (327)
142 3lm5_A Serine/threonine-protei 100.0 5.4E-39 1.9E-43 354.3 19.3 261 582-867 20-287 (327)
143 3f66_A Hepatocyte growth facto 100.0 7.2E-39 2.5E-43 348.7 19.9 262 590-877 25-294 (298)
144 2ozo_A Tyrosine-protein kinase 100.0 6.7E-39 2.3E-43 381.7 21.2 261 592-879 337-603 (613)
145 2jii_A Serine/threonine-protei 100.0 2.4E-39 8E-44 361.2 16.1 276 589-886 41-348 (352)
146 3llt_A Serine/threonine kinase 100.0 8.9E-39 3.1E-43 357.9 20.8 267 585-867 30-355 (360)
147 2eue_A Carbon catabolite derep 100.0 1E-38 3.5E-43 343.1 20.5 247 590-867 13-262 (275)
148 3kn6_A Ribosomal protein S6 ki 100.0 5.2E-39 1.8E-43 353.7 18.5 255 595-879 16-276 (325)
149 1t4h_A Serine/threonine-protei 100.0 1.9E-38 6.4E-43 344.0 22.6 248 591-867 27-282 (290)
150 2v62_A Serine/threonine-protei 100.0 9E-39 3.1E-43 355.3 20.4 267 589-873 36-327 (345)
151 2yfx_A Tyrosine-protein kinase 100.0 5.3E-39 1.8E-43 354.7 18.4 264 589-874 29-304 (327)
152 1b6c_B TGF-B superfamily recep 100.0 2.8E-38 9.6E-43 351.3 24.2 270 582-875 34-337 (342)
153 4fl3_A Tyrosine-protein kinase 100.0 7.8E-39 2.7E-43 381.9 21.1 252 596-874 375-631 (635)
154 2h34_A Serine/threonine-protei 100.0 1.1E-38 3.9E-43 348.8 20.6 261 588-874 32-296 (309)
155 4ejn_A RAC-alpha serine/threon 100.0 3.9E-39 1.3E-43 371.0 17.4 251 589-867 147-404 (446)
156 2acx_A G protein-coupled recep 100.0 7.1E-39 2.4E-43 372.5 19.6 255 589-867 183-444 (576)
157 4fvq_A Tyrosine-protein kinase 100.0 4.4E-39 1.5E-43 348.8 16.7 252 589-874 7-275 (289)
158 3pls_A Macrophage-stimulating 100.0 1.4E-38 4.6E-43 346.5 20.6 261 591-877 22-290 (298)
159 3gbz_A Kinase, CMGC CDK; ssgci 100.0 7.1E-39 2.4E-43 353.7 18.4 268 587-867 31-318 (329)
160 3sv0_A Casein kinase I-like; t 100.0 2.5E-38 8.7E-43 364.2 23.5 267 588-877 5-281 (483)
161 2y7j_A Phosphorylase B kinase 100.0 4.7E-38 1.6E-42 351.8 25.0 260 581-867 85-359 (365)
162 2qr7_A Ribosomal protein S6 ki 100.0 6.4E-39 2.2E-43 354.8 17.7 252 587-867 19-277 (342)
163 1fvr_A Tyrosine-protein kinase 100.0 1E-38 3.5E-43 352.3 19.2 261 590-875 25-301 (327)
164 2w5a_A Serine/threonine-protei 100.0 5.8E-39 2E-43 345.9 16.7 257 589-869 5-269 (279)
165 3g33_A Cell division protein k 100.0 9.3E-39 3.2E-43 349.5 18.5 269 587-867 6-296 (308)
166 4eut_A Serine/threonine-protei 100.0 1.7E-38 5.8E-43 359.8 21.2 276 589-874 8-309 (396)
167 1cm8_A Phosphorylated MAP kina 100.0 2E-38 6.8E-43 355.0 21.3 263 588-867 23-307 (367)
168 3rp9_A Mitogen-activated prote 100.0 6.4E-39 2.2E-43 370.9 17.9 196 589-793 52-279 (458)
169 2ac3_A MAP kinase-interacting 100.0 1.8E-38 6.3E-43 348.6 20.7 268 589-867 11-295 (316)
170 3dls_A PAS domain-containing s 100.0 4.4E-39 1.5E-43 355.7 15.7 245 587-867 21-274 (335)
171 3mwu_A Calmodulin-domain prote 100.0 1.5E-38 5.2E-43 370.3 21.0 254 587-868 19-277 (486)
172 1byg_A CSK, protein (C-termina 100.0 6E-39 2E-43 345.6 16.1 253 589-875 20-274 (278)
173 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.1E-38 7.2E-43 368.0 21.9 252 590-862 185-438 (543)
174 3fdn_A Serine/threonine-protei 100.0 2.2E-38 7.5E-43 341.3 20.5 249 589-868 8-258 (279)
175 3gxj_A TGF-beta receptor type- 100.0 2.6E-40 9E-45 361.0 5.6 263 589-874 2-297 (303)
176 3lij_A Calcium/calmodulin depe 100.0 1.9E-38 6.6E-43 370.0 21.5 252 588-867 35-291 (494)
177 2buj_A Serine/threonine-protei 100.0 7E-39 2.4E-43 352.1 16.8 264 589-874 28-306 (317)
178 1x8b_A WEE1HU, WEE1-like prote 100.0 1.8E-38 6.3E-43 343.6 19.9 250 587-867 8-279 (289)
179 3i6u_A CDS1, serine/threonine- 100.0 3.3E-38 1.1E-42 359.6 22.4 255 586-867 131-399 (419)
180 3n9x_A Phosphotransferase; mal 100.0 4.1E-38 1.4E-42 360.5 23.0 203 588-799 24-253 (432)
181 3cok_A Serine/threonine-protei 100.0 1.5E-38 5.1E-43 342.5 18.2 251 589-867 10-262 (278)
182 3bhy_A Death-associated protei 100.0 4.1E-38 1.4E-42 340.0 21.4 252 589-867 4-265 (283)
183 3q5i_A Protein kinase; CDPK, m 100.0 6.2E-38 2.1E-42 366.7 23.9 252 588-867 34-301 (504)
184 3fme_A Dual specificity mitoge 100.0 1.3E-38 4.5E-43 345.2 16.8 255 589-867 6-266 (290)
185 4aaa_A Cyclin-dependent kinase 100.0 2.9E-38 1E-42 349.2 19.9 267 589-867 24-306 (331)
186 2a19_B Interferon-induced, dou 100.0 1.8E-38 6E-43 343.0 17.6 251 587-875 8-275 (284)
187 2rku_A Serine/threonine-protei 100.0 6.3E-38 2.1E-42 340.6 22.0 251 589-868 14-266 (294)
188 1u46_A ACK-1, activated CDC42 100.0 1.7E-38 5.8E-43 344.5 17.4 260 590-874 18-284 (291)
189 2xrw_A Mitogen-activated prote 100.0 7.1E-38 2.4E-42 351.5 22.9 263 589-867 24-318 (371)
190 3eqc_A Dual specificity mitoge 100.0 1.6E-38 5.4E-43 355.9 17.4 266 589-867 32-324 (360)
191 2w1i_A JAK2; chromosomal rearr 100.0 3E-38 1E-42 348.4 19.3 273 589-875 40-323 (326)
192 3mi9_A Cell division protein k 100.0 3.3E-38 1.1E-42 351.9 19.9 269 590-867 17-311 (351)
193 2fst_X Mitogen-activated prote 100.0 4.4E-38 1.5E-42 351.7 20.3 265 588-867 27-311 (367)
194 2owb_A Serine/threonine-protei 100.0 7.4E-38 2.5E-42 346.4 21.8 250 589-867 40-291 (335)
195 1vzo_A Ribosomal protein S6 ki 100.0 1.1E-38 3.8E-43 355.6 15.0 255 590-868 54-322 (355)
196 3nyv_A Calmodulin-domain prote 100.0 2.8E-38 9.4E-43 368.3 18.8 252 588-867 24-281 (484)
197 2jam_A Calcium/calmodulin-depe 100.0 5.5E-38 1.9E-42 342.8 19.9 250 588-867 7-261 (304)
198 3mtl_A Cell division protein k 100.0 1.3E-38 4.5E-43 350.7 15.0 267 590-867 2-281 (324)
199 3ll6_A Cyclin G-associated kin 100.0 2.9E-38 9.9E-43 350.4 17.7 257 590-875 28-309 (337)
200 3a7i_A MST3 kinase, serine/thr 100.0 7.9E-38 2.7E-42 341.4 20.9 251 589-869 21-272 (303)
201 2vgo_A Serine/threonine-protei 100.0 9.3E-38 3.2E-42 337.4 21.0 248 589-867 13-262 (284)
202 3byv_A Rhoptry kinase; malaria 100.0 2.8E-39 9.7E-44 363.9 9.0 246 589-867 72-359 (377)
203 3kvw_A DYRK2, dual specificity 100.0 1.3E-37 4.5E-42 355.5 22.7 202 588-804 95-305 (429)
204 1ua2_A CAK, cell division prot 100.0 5.1E-38 1.7E-42 349.4 18.4 269 587-867 7-291 (346)
205 2wtk_C Serine/threonine-protei 100.0 2.4E-37 8.2E-42 337.9 23.3 255 588-868 3-264 (305)
206 3an0_A Dual specificity mitoge 100.0 3.9E-38 1.3E-42 349.7 17.4 256 588-867 49-310 (340)
207 3cek_A Dual specificity protei 100.0 5.6E-38 1.9E-42 344.2 18.2 255 588-868 26-293 (313)
208 3pfq_A PKC-B, PKC-beta, protei 100.0 6.1E-38 2.1E-42 376.8 20.0 246 588-862 339-587 (674)
209 3com_A Serine/threonine-protei 100.0 1.7E-37 5.7E-42 340.6 21.6 253 586-867 25-278 (314)
210 2y4i_B KSR2, HKSR2, kinase sup 100.0 7.3E-39 2.5E-43 352.3 10.8 261 588-875 31-303 (319)
211 2r3i_A Cell division protein k 100.0 9.6E-38 3.3E-42 340.0 19.4 267 590-867 3-283 (299)
212 3nsz_A CK II alpha, casein kin 100.0 2.9E-37 1E-41 341.3 23.4 256 590-867 36-319 (330)
213 2clq_A Mitogen-activated prote 100.0 2.4E-37 8.3E-42 336.1 22.3 252 591-867 23-278 (295)
214 3pg1_A Mitogen-activated prote 100.0 1.1E-37 3.6E-42 349.5 19.6 274 581-867 13-316 (362)
215 2h6d_A 5'-AMP-activated protei 100.0 1.6E-37 5.4E-42 334.1 20.2 249 589-867 10-261 (276)
216 2ycf_A Serine/threonine-protei 100.0 1.2E-37 4E-42 343.1 19.5 254 587-867 7-274 (322)
217 2j7t_A Serine/threonine-protei 100.0 4.8E-38 1.6E-42 342.9 16.2 253 588-867 17-275 (302)
218 3qyz_A Mitogen-activated prote 100.0 2.8E-37 9.7E-42 345.9 22.4 266 589-867 26-313 (364)
219 3eb0_A Putative uncharacterize 100.0 1.7E-37 5.9E-42 350.1 20.2 266 586-867 3-321 (383)
220 2wei_A Calmodulin-domain prote 100.0 2.2E-37 7.5E-42 335.0 19.7 256 584-867 16-276 (287)
221 2pml_X PFPK7, Ser/Thr protein 100.0 1.1E-37 3.7E-42 347.5 17.5 254 589-867 30-322 (348)
222 1phk_A Phosphorylase kinase; g 100.0 4.3E-37 1.5E-41 334.7 21.4 254 587-867 14-283 (298)
223 3rgf_A Cyclin-dependent kinase 100.0 1.3E-37 4.5E-42 353.9 18.0 279 588-880 18-340 (405)
224 2vwi_A Serine/threonine-protei 100.0 3.7E-38 1.3E-42 344.0 12.5 266 588-867 13-287 (303)
225 4exu_A Mitogen-activated prote 100.0 4.1E-37 1.4E-41 345.4 21.2 262 588-867 40-323 (371)
226 1z57_A Dual specificity protei 100.0 5E-37 1.7E-41 340.7 21.6 263 589-867 13-328 (339)
227 2j0j_A Focal adhesion kinase 1 100.0 2.2E-37 7.5E-42 370.8 20.1 258 589-874 389-651 (656)
228 1wak_A Serine/threonine-protei 100.0 1.9E-37 6.6E-42 352.1 18.3 261 589-867 36-391 (397)
229 2x7f_A TRAF2 and NCK-interacti 100.0 2.8E-37 9.7E-42 340.7 18.9 253 587-867 21-286 (326)
230 1blx_A Cyclin-dependent kinase 100.0 2.7E-37 9.1E-42 341.0 18.6 268 588-867 9-296 (326)
231 3q60_A ROP5B; pseudokinase, tr 100.0 7.7E-38 2.6E-42 351.5 14.1 255 590-867 62-352 (371)
232 1j1b_A Glycogen synthase kinas 100.0 4.5E-37 1.6E-41 350.3 20.5 261 590-867 54-336 (420)
233 4e7w_A Glycogen synthase kinas 100.0 4E-37 1.4E-41 347.9 19.9 263 589-867 39-321 (394)
234 2i6l_A Mitogen-activated prote 100.0 6.3E-37 2.1E-41 337.0 20.7 265 589-867 10-305 (320)
235 2b9h_A MAP kinase FUS3, mitoge 100.0 8.2E-37 2.8E-41 341.1 21.3 269 588-867 9-305 (353)
236 3v47_A TOLL-like receptor 5B a 100.0 3.3E-36 1.1E-40 348.6 26.7 250 51-303 5-318 (455)
237 3coi_A Mitogen-activated prote 100.0 6E-37 2.1E-41 342.0 18.8 261 589-867 23-305 (353)
238 2vx3_A Dual specificity tyrosi 100.0 1.3E-36 4.4E-41 342.9 21.5 204 588-804 52-264 (382)
239 3e3p_A Protein kinase, putativ 100.0 6.8E-37 2.3E-41 342.7 18.6 274 583-867 16-314 (360)
240 1zy4_A Serine/threonine-protei 100.0 1.2E-36 4E-41 332.0 19.5 252 588-867 4-283 (303)
241 2dyl_A Dual specificity mitoge 100.0 7.8E-37 2.7E-41 336.0 17.5 254 589-867 24-283 (318)
242 3aln_A Dual specificity mitoge 100.0 3.9E-37 1.3E-41 339.7 15.1 256 590-868 22-286 (327)
243 2eu9_A Dual specificity protei 100.0 2.8E-36 9.5E-41 337.0 21.5 263 589-867 18-333 (355)
244 3fhr_A MAP kinase-activated pr 100.0 1.3E-36 4.6E-41 336.2 18.3 252 588-867 26-287 (336)
245 3j0a_A TOLL-like receptor 5; m 100.0 7.7E-36 2.6E-40 370.8 26.4 396 54-455 14-564 (844)
246 2rio_A Serine/threonine-protei 100.0 1E-36 3.4E-41 349.0 16.9 251 590-867 15-295 (434)
247 1q8y_A SR protein kinase; tran 100.0 1.4E-36 4.8E-41 341.9 16.8 260 590-867 19-333 (373)
248 3a99_A Proto-oncogene serine/t 100.0 7.2E-37 2.5E-41 336.2 13.7 247 584-867 37-293 (320)
249 2iwi_A Serine/threonine-protei 100.0 2E-36 6.8E-41 331.7 15.2 246 585-867 26-283 (312)
250 3p23_A Serine/threonine-protei 100.0 3.9E-36 1.3E-40 342.9 17.5 248 590-867 24-283 (432)
251 3rgz_A Protein brassinosteroid 100.0 1.5E-35 5.2E-40 364.4 23.4 355 65-433 294-743 (768)
252 3vq2_A TLR4, TOLL-like recepto 100.0 1.2E-34 4E-39 348.3 27.1 374 65-456 32-563 (606)
253 3uqc_A Probable conserved tran 100.0 2.5E-35 8.4E-40 317.8 17.1 233 589-874 30-265 (286)
254 2id5_A Lingo-1, leucine rich r 100.0 1.3E-34 4.4E-39 337.1 24.2 335 55-457 12-362 (477)
255 2pzi_A Probable serine/threoni 100.0 4.8E-35 1.6E-39 354.5 19.4 241 589-873 79-327 (681)
256 2z81_A CD282 antigen, TOLL-lik 100.0 4E-34 1.4E-38 339.4 26.7 378 53-455 3-514 (549)
257 3qa8_A MGC80376 protein; kinas 100.0 1.2E-35 4.2E-40 348.2 12.4 271 589-873 13-308 (676)
258 3dzo_A Rhoptry kinase domain; 100.0 2.2E-35 7.4E-40 335.7 13.3 245 590-867 78-363 (413)
259 3t6q_A CD180 antigen; protein- 100.0 3.3E-33 1.1E-37 335.7 30.6 244 56-302 14-343 (606)
260 3m2w_A MAP kinase-activated pr 100.0 4.2E-34 1.4E-38 311.0 18.0 231 588-867 15-256 (299)
261 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 6.8E-33 2.3E-37 329.2 28.1 137 64-208 51-192 (562)
262 2id5_A Lingo-1, leucine rich r 100.0 3.3E-33 1.1E-37 325.3 24.3 325 58-455 6-337 (477)
263 1ziw_A TOLL-like receptor 3; i 100.0 5.3E-33 1.8E-37 338.6 27.0 375 54-437 4-449 (680)
264 2z63_A TOLL-like receptor 4, v 100.0 6.1E-33 2.1E-37 330.9 25.4 348 66-455 29-535 (570)
265 2z7x_B TOLL-like receptor 1, v 100.0 4.9E-33 1.7E-37 327.6 23.8 127 65-199 21-150 (520)
266 3v47_A TOLL-like receptor 5B a 100.0 2.7E-33 9.2E-38 324.1 21.2 309 65-436 54-413 (455)
267 3t6q_A CD180 antigen; protein- 100.0 1.4E-32 4.8E-37 330.2 27.3 302 113-455 255-564 (606)
268 2vuw_A Serine/threonine-protei 100.0 8.4E-35 2.9E-39 322.2 7.3 240 589-866 19-329 (336)
269 4g8a_A TOLL-like receptor 4; l 100.0 3.2E-32 1.1E-36 329.1 29.4 351 65-455 52-584 (635)
270 3oja_B Anopheles plasmodium-re 100.0 7.9E-33 2.7E-37 330.5 23.3 220 66-302 52-272 (597)
271 4eco_A Uncharacterized protein 100.0 6.8E-33 2.3E-37 332.9 22.3 344 65-432 206-601 (636)
272 3o6n_A APL1; leucine-rich repe 100.0 4.5E-32 1.5E-36 306.9 24.6 220 65-302 45-266 (390)
273 4ecn_A Leucine-rich repeat pro 100.0 2.2E-32 7.7E-37 333.4 23.5 345 65-454 448-843 (876)
274 4fcg_A Uncharacterized protein 100.0 2.8E-33 9.5E-38 307.9 12.8 272 25-430 24-313 (328)
275 2z63_A TOLL-like receptor 4, v 100.0 7E-32 2.4E-36 321.7 23.6 334 65-437 52-537 (570)
276 1ziw_A TOLL-like receptor 3; i 100.0 3.8E-31 1.3E-35 322.2 29.6 225 65-293 49-305 (680)
277 1ogq_A PGIP-2, polygalacturona 100.0 2.8E-32 9.4E-37 298.2 15.8 250 114-456 52-309 (313)
278 3vq2_A TLR4, TOLL-like recepto 100.0 5.3E-31 1.8E-35 316.5 28.4 159 69-233 15-176 (606)
279 3bz5_A Internalin-J, INLJ; leu 100.0 2.3E-30 7.9E-35 297.4 31.9 337 65-436 42-392 (457)
280 3oja_B Anopheles plasmodium-re 100.0 3.1E-31 1.1E-35 316.6 23.7 287 65-435 75-362 (597)
281 2z7x_B TOLL-like receptor 1, v 100.0 8.9E-32 3E-36 316.8 16.4 144 68-222 3-150 (520)
282 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 9.2E-31 3.2E-35 310.9 24.4 317 65-435 76-514 (562)
283 2z81_A CD282 antigen, TOLL-lik 100.0 2.4E-31 8.2E-36 315.5 18.9 344 65-436 50-515 (549)
284 2ft3_A Biglycan; proteoglycan, 100.0 4.2E-30 1.5E-34 283.8 25.2 285 67-429 35-331 (332)
285 2z80_A TOLL-like receptor 2, v 100.0 3.8E-31 1.3E-35 294.9 16.2 285 50-436 26-319 (353)
286 3j0a_A TOLL-like receptor 5; m 100.0 9.8E-30 3.4E-34 315.9 29.3 207 68-282 7-226 (844)
287 1xku_A Decorin; proteoglycan, 100.0 2.6E-29 9E-34 277.3 25.5 214 69-297 35-253 (330)
288 3o6n_A APL1; leucine-rich repe 100.0 6.4E-30 2.2E-34 289.2 20.5 310 86-453 42-354 (390)
289 4fmz_A Internalin; leucine ric 100.0 3.4E-29 1.2E-33 278.6 24.5 214 65-298 44-257 (347)
290 4fmz_A Internalin; leucine ric 100.0 3.5E-29 1.2E-33 278.5 24.6 281 65-431 66-346 (347)
291 1o6v_A Internalin A; bacterial 100.0 3E-29 1E-33 290.5 24.7 303 65-435 68-370 (466)
292 2ft3_A Biglycan; proteoglycan, 100.0 5E-29 1.7E-33 275.2 24.5 283 54-405 33-331 (332)
293 1jl5_A Outer protein YOPM; leu 100.0 2.4E-29 8E-34 288.8 21.4 322 66-439 12-380 (454)
294 1xku_A Decorin; proteoglycan, 100.0 1.1E-28 3.6E-33 272.4 25.8 268 90-431 32-306 (330)
295 1o6v_A Internalin A; bacterial 100.0 6.9E-29 2.4E-33 287.4 22.7 301 65-433 90-390 (466)
296 4g8a_A TOLL-like receptor 4; l 100.0 1.9E-28 6.5E-33 296.0 26.3 333 65-435 76-584 (635)
297 3g06_A SSPH2 (leucine-rich rep 100.0 1.1E-28 3.7E-33 291.6 21.5 285 47-440 14-306 (622)
298 2z66_A Variable lymphocyte rec 100.0 5.3E-29 1.8E-33 271.7 16.5 201 54-298 7-213 (306)
299 3bz5_A Internalin-J, INLJ; leu 100.0 5.5E-28 1.9E-32 277.7 25.5 295 76-432 29-332 (457)
300 3zyi_A Leucine-rich repeat-con 100.0 8.1E-28 2.8E-32 277.3 24.2 249 69-435 58-307 (452)
301 3zyj_A Leucine-rich repeat-con 100.0 1.2E-27 4E-32 275.0 23.8 249 68-434 46-295 (440)
302 2z66_A Variable lymphocyte rec 100.0 1.8E-27 6.3E-32 259.5 22.0 251 92-435 10-265 (306)
303 4azs_A Methyltransferase WBDD; 100.0 6.9E-29 2.3E-33 291.6 9.9 188 597-798 241-438 (569)
304 3oja_A Leucine-rich immune mol 100.0 5.4E-30 1.8E-34 297.1 0.2 224 110-438 32-258 (487)
305 1ozn_A Reticulon 4 receptor; N 99.9 2.9E-27 9.9E-32 255.1 18.3 208 58-298 5-215 (285)
306 1wwl_A Monocyte differentiatio 99.9 3.1E-29 1.1E-33 274.0 1.8 249 85-433 39-311 (312)
307 1jl5_A Outer protein YOPM; leu 99.9 3.2E-26 1.1E-30 262.7 26.5 312 65-441 91-421 (454)
308 2o6q_A Variable lymphocyte rec 99.9 2.1E-26 7.1E-31 246.1 21.7 219 51-301 2-222 (270)
309 4fcg_A Uncharacterized protein 99.9 1.5E-26 5.2E-31 254.1 19.3 201 65-297 104-314 (328)
310 3o53_A Protein LRIM1, AGAP0063 99.9 1.3E-27 4.3E-32 261.9 7.6 267 65-436 10-281 (317)
311 2z80_A TOLL-like receptor 2, v 99.9 1.1E-26 3.7E-31 258.9 13.6 276 64-435 51-335 (353)
312 1ozn_A Reticulon 4 receptor; N 99.9 4.1E-26 1.4E-30 246.0 17.6 179 92-301 14-194 (285)
313 3oja_A Leucine-rich immune mol 99.9 6.5E-27 2.2E-31 271.2 10.5 235 88-427 33-271 (487)
314 1wwl_A Monocyte differentiatio 99.9 9.2E-28 3.1E-32 262.4 2.1 263 47-408 23-310 (312)
315 3zyj_A Leucine-rich repeat-con 99.9 4.3E-25 1.5E-29 253.6 23.8 237 55-298 44-293 (440)
316 3zyi_A Leucine-rich repeat-con 99.9 3.6E-25 1.2E-29 255.2 22.3 236 56-298 56-304 (452)
317 3o53_A Protein LRIM1, AGAP0063 99.9 1.4E-26 4.8E-31 253.6 9.1 245 90-439 11-259 (317)
318 3en9_A Glycoprotease, O-sialog 99.9 5.7E-26 1.9E-30 265.3 8.9 188 593-799 339-539 (540)
319 3g06_A SSPH2 (leucine-rich rep 99.9 2.2E-24 7.4E-29 254.9 22.3 248 65-418 61-308 (622)
320 2z62_A TOLL-like receptor 4, v 99.9 2.6E-24 8.8E-29 230.7 19.0 218 80-302 21-242 (276)
321 2z62_A TOLL-like receptor 4, v 99.9 6.2E-24 2.1E-28 227.8 19.0 212 112-436 28-242 (276)
322 1z7x_W Ribonuclease inhibitor; 99.9 3.5E-27 1.2E-31 273.2 -9.0 231 66-299 29-299 (461)
323 3rfs_A Internalin B, repeat mo 99.9 6.7E-24 2.3E-28 226.8 15.7 42 371-419 206-247 (272)
324 3rfs_A Internalin B, repeat mo 99.9 6E-24 2.1E-28 227.2 13.9 225 90-441 20-245 (272)
325 1z7x_W Ribonuclease inhibitor; 99.9 8.8E-27 3E-31 269.9 -11.9 311 65-433 56-413 (461)
326 3m19_A Variable lymphocyte rec 99.9 8.3E-23 2.8E-27 215.5 18.1 190 52-299 3-194 (251)
327 1p9a_G Platelet glycoprotein I 99.9 1.9E-22 6.5E-27 217.2 21.0 206 107-434 5-211 (290)
328 1p9a_G Platelet glycoprotein I 99.9 2E-22 6.8E-27 217.0 19.9 202 61-298 6-209 (290)
329 2o6q_A Variable lymphocyte rec 99.9 7.3E-22 2.5E-26 210.8 22.4 205 113-435 17-222 (270)
330 4glp_A Monocyte differentiatio 99.9 1.8E-23 6.3E-28 228.0 10.0 203 136-432 91-308 (310)
331 1h6u_A Internalin H; cell adhe 99.9 3.3E-22 1.1E-26 217.5 18.0 59 236-297 172-230 (308)
332 2ast_B S-phase kinase-associat 99.9 1.5E-24 5E-29 240.0 -0.9 211 52-295 35-258 (336)
333 2xwt_C Thyrotropin receptor; s 99.9 3.1E-22 1.1E-26 209.5 14.8 185 80-298 25-219 (239)
334 3goz_A Leucine-rich repeat-con 99.9 5.2E-24 1.8E-28 237.8 0.2 80 70-149 3-93 (362)
335 4glp_A Monocyte differentiatio 99.9 2.3E-22 8E-27 219.3 12.7 227 66-298 65-308 (310)
336 2xwt_C Thyrotropin receptor; s 99.9 1.1E-21 3.7E-26 205.4 16.5 195 65-294 31-236 (239)
337 2ca6_A RAN GTPase-activating p 99.9 1.3E-24 4.3E-29 245.3 -6.6 196 80-298 23-258 (386)
338 1zar_A RIO2 kinase; serine kin 99.9 2.6E-22 8.8E-27 214.7 10.9 154 583-771 83-252 (282)
339 3m19_A Variable lymphocyte rec 99.9 1.1E-20 3.7E-25 199.3 20.5 160 114-305 16-176 (251)
340 3cvr_A Invasion plasmid antige 99.9 1.3E-21 4.4E-26 228.3 14.6 197 50-302 39-248 (571)
341 3goz_A Leucine-rich repeat-con 99.9 1.7E-23 6E-28 233.5 -1.3 263 93-414 2-304 (362)
342 1h6u_A Internalin H; cell adhe 99.9 4.2E-21 1.4E-25 208.8 17.3 194 65-279 41-235 (308)
343 2o6s_A Variable lymphocyte rec 99.8 4.4E-21 1.5E-25 196.1 14.4 183 54-285 7-190 (208)
344 4ay9_X Follicle-stimulating ho 99.8 7.5E-21 2.6E-25 211.0 16.7 197 70-298 14-216 (350)
345 3cvr_A Invasion plasmid antige 99.8 1.4E-20 4.8E-25 219.5 17.3 134 113-297 60-193 (571)
346 2ca6_A RAN GTPase-activating p 99.8 4.2E-22 1.4E-26 224.6 -0.8 206 65-298 32-288 (386)
347 2o6s_A Variable lymphocyte rec 99.8 6.3E-20 2.2E-24 187.5 15.0 151 92-297 10-161 (208)
348 4ay9_X Follicle-stimulating ho 99.8 4.3E-20 1.5E-24 204.9 14.8 251 92-438 12-266 (350)
349 2ast_B S-phase kinase-associat 99.8 2.5E-21 8.7E-26 213.9 3.6 201 65-294 70-282 (336)
350 4b8c_D Glucose-repressible alc 99.8 7.7E-21 2.6E-25 230.2 4.9 223 27-302 131-359 (727)
351 3e6j_A Variable lymphocyte rec 99.8 5.4E-19 1.8E-23 183.2 16.5 163 47-253 12-175 (229)
352 1m9s_A Internalin B; cell inva 99.8 3.9E-19 1.3E-23 209.8 16.8 176 85-301 39-214 (605)
353 1h6t_A Internalin B; cell adhe 99.8 7.2E-19 2.5E-23 189.4 14.5 174 85-299 42-215 (291)
354 1m9s_A Internalin B; cell inva 99.8 2.4E-19 8.2E-24 211.6 10.2 169 89-298 21-189 (605)
355 3ogk_B Coronatine-insensitive 99.8 5.5E-21 1.9E-25 228.5 -5.0 332 65-433 164-528 (592)
356 2v70_A SLIT-2, SLIT homolog 2 99.8 1.6E-18 5.5E-23 178.4 13.4 155 190-435 14-170 (220)
357 1zth_A RIO1 serine protein kin 99.8 1.9E-18 6.5E-23 182.5 11.2 138 592-746 49-219 (258)
358 2v9t_B SLIT homolog 2 protein 99.8 7.9E-18 2.7E-22 173.2 15.6 150 70-251 16-166 (220)
359 2xot_A Amphoterin-induced prot 99.8 3.4E-18 1.2E-22 190.3 13.6 174 69-298 22-203 (361)
360 2v70_A SLIT-2, SLIT homolog 2 99.7 1E-17 3.6E-22 172.2 15.9 135 139-301 35-170 (220)
361 3ogk_B Coronatine-insensitive 99.7 3.2E-20 1.1E-24 221.9 -3.5 332 66-433 139-503 (592)
362 2v9t_B SLIT homolog 2 protein 99.7 7.8E-18 2.7E-22 173.2 13.9 145 54-201 11-166 (220)
363 1h6t_A Internalin B; cell adhe 99.7 4.5E-18 1.5E-22 183.1 12.3 169 65-274 46-214 (291)
364 2xot_A Amphoterin-induced prot 99.7 5.3E-18 1.8E-22 188.8 12.4 147 54-201 18-177 (361)
365 1dce_A Protein (RAB geranylger 99.7 2.8E-20 9.6E-25 218.3 -6.7 189 86-301 346-550 (567)
366 3e6j_A Variable lymphocyte rec 99.7 5.3E-17 1.8E-21 168.1 16.7 154 91-299 21-174 (229)
367 1dce_A Protein (RAB geranylger 99.7 3.2E-20 1.1E-24 217.8 -9.2 203 133-425 346-567 (567)
368 1xeu_A Internalin C; cellular 99.7 5.4E-18 1.9E-22 179.5 8.7 172 87-300 17-188 (263)
369 4ezg_A Putative uncharacterize 99.7 1.5E-17 5.2E-22 168.0 11.0 155 109-298 41-195 (197)
370 2p1m_B Transport inhibitor res 99.7 7.2E-20 2.5E-24 219.0 -8.4 131 65-197 105-245 (594)
371 4b8c_D Glucose-repressible alc 99.7 1.4E-18 4.9E-23 210.4 1.7 162 89-302 173-334 (727)
372 4ezg_A Putative uncharacterize 99.7 3.3E-17 1.1E-21 165.5 10.7 153 86-273 41-194 (197)
373 1xeu_A Internalin C; cellular 99.7 2.2E-17 7.4E-22 174.9 8.7 167 67-275 21-187 (263)
374 2p1m_B Transport inhibitor res 99.7 7.4E-19 2.5E-23 210.2 -7.6 328 65-432 130-520 (594)
375 1w8a_A SLIT protein; signaling 99.7 5.4E-16 1.9E-20 155.7 13.8 133 240-436 11-144 (192)
376 1w8a_A SLIT protein; signaling 99.6 5E-16 1.7E-20 156.0 12.5 131 68-204 11-143 (192)
377 4gyi_A RIO2 kinase; protein ki 99.6 5.9E-16 2E-20 169.0 11.0 140 591-746 96-265 (397)
378 2o6r_A Variable lymphocyte rec 99.6 3E-15 1E-19 148.3 13.1 134 54-204 7-141 (177)
379 2ell_A Acidic leucine-rich nuc 99.6 8.2E-16 2.8E-20 151.0 8.8 137 65-205 24-164 (168)
380 2je0_A Acidic leucine-rich nuc 99.6 1.6E-15 5.3E-20 145.7 6.4 128 65-195 17-148 (149)
381 2wfh_A SLIT homolog 2 protein 99.6 1.1E-14 3.6E-19 146.2 12.3 127 69-201 14-140 (193)
382 2ell_A Acidic leucine-rich nuc 99.6 6.5E-15 2.2E-19 144.5 10.2 133 136-298 24-161 (168)
383 2je0_A Acidic leucine-rich nuc 99.6 5.2E-15 1.8E-19 141.9 9.2 106 236-427 41-149 (149)
384 2o6r_A Variable lymphocyte rec 99.6 1.7E-14 5.9E-19 142.8 13.0 134 239-436 9-142 (177)
385 2wfh_A SLIT homolog 2 protein 99.6 2.3E-14 8E-19 143.7 13.9 131 240-435 13-143 (193)
386 3sb4_A Hypothetical leucine ri 99.5 4.4E-15 1.5E-19 163.0 4.3 285 66-424 26-327 (329)
387 3sb4_A Hypothetical leucine ri 99.5 4.9E-14 1.7E-18 154.6 10.6 257 64-401 48-328 (329)
388 1a9n_A U2A', U2A'; complex (nu 99.5 5.8E-14 2E-18 138.8 9.5 43 389-432 108-154 (176)
389 1a9n_A U2A', U2A'; complex (nu 99.4 5.3E-14 1.8E-18 139.1 6.4 128 65-200 19-153 (176)
390 2r9u_A Variable lymphocyte rec 99.4 1.1E-12 3.7E-17 129.1 12.5 104 68-175 15-119 (174)
391 1ds9_A Outer arm dynein; leuci 99.4 1.1E-15 3.9E-20 154.3 -9.4 160 85-297 14-185 (198)
392 3g39_A Variable lymphocyte rec 99.4 9.8E-13 3.4E-17 128.9 11.2 105 68-176 12-117 (170)
393 1ds9_A Outer arm dynein; leuci 99.4 1E-15 3.5E-20 154.7 -10.6 133 65-204 18-157 (198)
394 4fdw_A Leucine rich hypothetic 99.4 1.8E-11 6E-16 137.2 22.2 261 89-430 113-382 (401)
395 3g39_A Variable lymphocyte rec 99.4 2.1E-12 7.1E-17 126.6 11.9 109 90-203 10-118 (170)
396 2r9u_A Variable lymphocyte rec 99.3 4.6E-12 1.6E-16 124.5 12.0 107 91-202 14-120 (174)
397 2ifg_A High affinity nerve gro 99.2 1.1E-11 3.7E-16 137.1 10.2 106 54-174 8-116 (347)
398 3tm0_A Aminoglycoside 3'-phosp 99.2 2.6E-11 8.8E-16 128.2 12.0 147 585-744 9-212 (263)
399 4fdw_A Leucine rich hypothetic 99.2 8.8E-10 3E-14 123.4 22.9 247 110-431 111-358 (401)
400 2ifg_A High affinity nerve gro 99.1 1E-10 3.4E-15 129.2 10.4 105 92-201 11-117 (347)
401 3un9_A NLR family member X1; l 99.1 8.9E-13 3E-17 146.3 -6.2 66 233-298 179-253 (372)
402 1nd4_A Aminoglycoside 3'-phosp 99.1 9.1E-11 3.1E-15 123.9 7.9 136 591-744 21-213 (264)
403 3un9_A NLR family member X1; l 99.1 2.1E-12 7.1E-17 143.3 -7.0 185 66-274 73-284 (372)
404 3dxp_A Putative acyl-COA dehyd 98.9 2.7E-09 9.2E-14 118.3 12.2 144 594-746 42-249 (359)
405 4fs7_A Uncharacterized protein 98.9 3.8E-08 1.3E-12 110.5 21.7 289 83-428 65-376 (394)
406 3sg8_A APH(2'')-ID; antibiotic 98.8 2.1E-09 7.3E-14 116.1 6.1 188 595-799 25-288 (304)
407 2ra8_A Uncharacterized protein 98.8 4.3E-10 1.5E-14 123.5 -0.2 82 64-148 106-205 (362)
408 4fs7_A Uncharacterized protein 98.7 3.9E-07 1.3E-11 102.1 20.7 271 101-428 59-353 (394)
409 4gt6_A Cell surface protein; l 98.7 1.1E-06 3.7E-11 98.5 23.0 36 256-292 261-296 (394)
410 2ra8_A Uncharacterized protein 98.7 4.9E-09 1.7E-13 115.1 3.0 185 88-298 106-321 (362)
411 3rw6_A Nuclear RNA export fact 98.6 1E-09 3.5E-14 114.1 -4.1 146 53-204 77-237 (267)
412 3r70_A Aminoglycoside phosphot 98.6 3.5E-07 1.2E-11 99.2 14.6 137 591-746 38-238 (320)
413 4gt6_A Cell surface protein; l 98.5 5.1E-06 1.7E-10 93.0 22.7 292 83-430 57-369 (394)
414 3d1u_A Putative fructosamine-3 98.4 7.9E-07 2.7E-11 94.5 10.5 78 592-675 17-97 (288)
415 3tdw_A Gentamicin resistance p 98.4 3.7E-06 1.3E-10 90.4 15.3 136 595-745 24-224 (306)
416 4gkh_A Aminoglycoside 3'-phosp 98.3 4.5E-06 1.5E-10 88.1 14.4 135 596-744 30-222 (272)
417 3ovc_A Hygromycin-B 4-O-kinase 98.3 5.2E-06 1.8E-10 91.4 13.7 149 590-746 41-244 (362)
418 4h09_A Hypothetical leucine ri 98.2 8.1E-05 2.8E-09 82.6 22.7 60 367-428 283-343 (379)
419 1io0_A Tropomodulin; LRR prote 98.2 1.2E-07 4.3E-12 93.7 -2.0 121 78-200 25-164 (185)
420 3rw6_A Nuclear RNA export fact 98.1 1.4E-07 5E-12 97.9 -2.2 79 185-290 168-257 (267)
421 1io0_A Tropomodulin; LRR prote 98.1 2.6E-07 8.7E-12 91.4 -0.7 119 108-250 32-164 (185)
422 3ats_A Putative uncharacterize 98.1 6.5E-06 2.2E-10 90.7 8.8 83 595-677 25-122 (357)
423 2q83_A YTAA protein; 2635576, 97.9 8.1E-05 2.8E-09 81.3 14.8 142 596-744 38-251 (346)
424 4h09_A Hypothetical leucine ri 97.8 0.0014 4.9E-08 72.4 22.8 58 370-428 263-320 (379)
425 2olc_A MTR kinase, methylthior 97.8 0.0001 3.5E-09 82.4 12.0 77 595-673 35-120 (397)
426 3jr1_A Putative fructosamine-3 97.7 0.00027 9.3E-09 75.5 13.2 141 594-741 40-232 (312)
427 3f7w_A Putative fructosamine-3 97.7 0.00012 4.1E-09 77.8 10.0 80 590-675 15-97 (288)
428 2ppq_A HSK, HK, homoserine kin 97.4 0.0011 3.7E-08 71.6 13.2 160 580-744 7-216 (322)
429 2pyw_A Uncharacterized protein 97.4 0.00087 3E-08 75.3 12.8 79 714-794 231-312 (420)
430 1zyl_A Hypothetical protein YI 97.3 0.0031 1.1E-07 68.1 15.3 144 596-745 32-223 (328)
431 3csv_A Aminoglycoside phosphot 97.2 0.0012 4E-08 71.6 10.3 144 596-746 24-218 (333)
432 3dxq_A Choline/ethanolamine ki 97.1 0.0014 4.9E-08 69.8 9.6 72 594-675 22-95 (301)
433 1nw1_A Choline kinase (49.2 KD 97.0 0.0013 4.4E-08 73.9 9.1 73 595-675 78-159 (429)
434 3e4g_A ATP synthase subunit S, 96.9 0.00013 4.6E-09 69.9 0.1 33 90-122 62-95 (176)
435 3feg_A Choline/ethanolamine ki 96.9 0.0028 9.5E-08 69.5 10.4 143 595-744 55-253 (379)
436 3rfe_A Platelet glycoprotein I 96.9 0.0016 5.3E-08 59.6 6.6 37 113-149 32-68 (130)
437 3e4g_A ATP synthase subunit S, 96.8 0.00032 1.1E-08 67.3 1.5 85 111-198 60-150 (176)
438 3c5i_A Choline kinase; choline 96.7 0.0027 9.2E-08 69.9 8.4 74 595-675 38-121 (369)
439 2qg7_A Ethanolamine kinase PV0 96.6 0.01 3.4E-07 66.9 12.4 74 595-675 113-188 (458)
440 3i1a_A Spectinomycin phosphotr 96.6 0.0091 3.1E-07 64.7 11.4 33 714-746 205-237 (339)
441 1pgv_A TMD-1, tropomodulin TMD 96.5 0.00034 1.2E-08 68.4 -0.4 118 156-297 36-170 (197)
442 1pgv_A TMD-1, tropomodulin TMD 96.4 0.00062 2.1E-08 66.6 0.8 68 81-148 33-110 (197)
443 3rfe_A Platelet glycoprotein I 96.3 0.0069 2.4E-07 55.2 6.8 56 240-297 11-68 (130)
444 3f2s_A CK, chetk-alpha, cholin 96.0 0.022 7.4E-07 62.7 10.1 145 596-744 58-279 (401)
445 2yle_A Protein spire homolog 1 95.9 0.037 1.3E-06 54.3 10.0 102 674-797 34-135 (229)
446 3mes_A Choline kinase; malaria 94.5 0.14 4.8E-06 56.8 10.9 142 595-744 75-290 (424)
447 3g15_A CK, chetk-alpha, cholin 91.2 0.85 2.9E-05 50.3 10.9 30 716-745 245-280 (401)
448 3cxl_A N-chimerin; SH2, RHO-GA 85.2 0.11 3.6E-06 58.7 -1.7 62 594-658 146-214 (463)
449 2jwa_A Receptor tyrosine-prote 85.1 0.045 1.5E-06 38.1 -2.9 31 490-521 11-41 (44)
450 4ano_A ESSB; membrane protein, 82.0 3.4 0.00012 40.6 7.8 82 646-742 48-130 (219)
451 2k1k_A Ephrin type-A receptor 82.0 0.075 2.6E-06 36.0 -2.7 24 489-512 9-32 (38)
452 4ann_A ESSB; membrane protein, 79.8 3.1 0.00011 40.7 6.6 115 646-799 43-158 (215)
453 2ks1_B Epidermal growth factor 79.8 0.15 5.2E-06 35.7 -1.9 27 493-519 13-39 (44)
454 2l2t_A Receptor tyrosine-prote 78.1 0.11 3.7E-06 36.3 -3.0 28 492-519 11-38 (44)
455 2lz0_A Uncharacterized protein 34.0 46 0.0016 27.9 4.6 38 107-145 15-52 (100)
456 1iij_A ERBB-2 receptor protein 32.7 0.51 1.7E-05 31.0 -5.9 25 493-518 10-34 (35)
457 3ls8_A Phosphatidylinositol 3- 32.2 3.4E+02 0.012 30.9 12.7 86 651-744 402-501 (614)
458 1cja_A Protein (actin-fragmin 28.5 1.9E+02 0.0064 30.2 8.9 135 596-745 75-237 (342)
459 2lz0_A Uncharacterized protein 21.0 1.8E+02 0.006 24.2 5.9 48 75-123 6-54 (100)
No 1
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.3e-52 Score=457.48 Aligned_cols=261 Identities=32% Similarity=0.537 Sum_probs=209.0
Q ss_pred cCCCcCceecccCceEEEEEEEc------CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCee
Q 002255 590 NNFSEENVLGRGGFGTVYKGELH------DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNER 663 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 663 (947)
++|.+.++||+|+||.||+|+++ +++.||||+++.. +....++|.+|+++|++++|||||+++|+|.+++..
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~ 118 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--SESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPL 118 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence 46777889999999999999875 4788999999754 566678899999999999999999999999999999
Q ss_pred EEEEEecCCCchhhhhhccccc----------CCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCC
Q 002255 664 LLVYEYMPQGTLSRHLFNRKEE----------GLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM 733 (947)
Q Consensus 664 ~lV~e~~~~gsL~~~l~~~~~~----------~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~ 733 (947)
++|||||++|+|.++++..... ...+++|.+++.|+.|||+||+|||+ ++||||||||+|||+++++
T Consensus 119 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLKp~NILl~~~~ 195 (329)
T 4aoj_A 119 LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNCLVGQGL 195 (329)
T ss_dssp EEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTT
T ss_pred EEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHhhEEECCCC
Confidence 9999999999999999764321 12469999999999999999999997 8999999999999999999
Q ss_pred cEEEeecCcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCCccCccchhhHHHH
Q 002255 734 RAKVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDETQSEDSVHLVTW 812 (947)
Q Consensus 734 ~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~l~~~ 812 (947)
.+||+|||+|+...............||+.|||||++.+..|+.++|||||||++|||+| |+.||.+....+. ..
T Consensus 196 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~---~~- 271 (329)
T 4aoj_A 196 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA---ID- 271 (329)
T ss_dssp EEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHH---HH-
T ss_pred cEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHH---HH-
Confidence 999999999997655444444456789999999999999999999999999999999999 8999986543221 11
Q ss_pred HHHhhcChhhHHHHhhc-cCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 002255 813 FRRMHINKDTFRKAIDR-TIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAE 874 (947)
Q Consensus 813 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~ 874 (947)
.+... .+..+ ...+.++.+|+.+||+.||++||||+||++.|+.+.+
T Consensus 272 ------------~i~~g~~~~~p---~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~ 319 (329)
T 4aoj_A 272 ------------CITQGRELERP---RACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 319 (329)
T ss_dssp ------------HHHHTCCCCCC---TTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred ------------HHHcCCCCCCc---ccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence 11111 11111 2234568899999999999999999999999999875
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=4.1e-53 Score=454.95 Aligned_cols=262 Identities=29% Similarity=0.507 Sum_probs=215.9
Q ss_pred cCCCcCceecccCceEEEEEEEc------CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCee
Q 002255 590 NNFSEENVLGRGGFGTVYKGELH------DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNER 663 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 663 (947)
++|.+.+.||+|+||.||+|++. +++.||||+++.. +....++|.+|+++|++++|||||+++|+|.+++..
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~ 90 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPL 90 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC--ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEE
Confidence 56788899999999999999864 4788999999754 566678899999999999999999999999999999
Q ss_pred EEEEEecCCCchhhhhhcccc--------cCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcE
Q 002255 664 LLVYEYMPQGTLSRHLFNRKE--------EGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRA 735 (947)
Q Consensus 664 ~lV~e~~~~gsL~~~l~~~~~--------~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~ 735 (947)
++|||||++|+|.++++.... .....++|.+++.++.|||+||+|||+ ++||||||||+|||+++++.+
T Consensus 91 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDlKp~NILl~~~~~~ 167 (299)
T 4asz_A 91 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLV 167 (299)
T ss_dssp EEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCE
T ss_pred EEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCccCHhhEEECCCCcE
Confidence 999999999999999976431 223469999999999999999999997 899999999999999999999
Q ss_pred EEeecCcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCCccCccchhhHHHHHH
Q 002255 736 KVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDETQSEDSVHLVTWFR 814 (947)
Q Consensus 736 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~l~~~~~ 814 (947)
||+|||+|+...............||+.|||||++.+..|+.++|||||||++|||+| |+.||.+....+. .
T Consensus 168 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~---~---- 240 (299)
T 4asz_A 168 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEV---I---- 240 (299)
T ss_dssp EECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH---H----
T ss_pred EECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH---H----
Confidence 9999999987655433333344579999999999999999999999999999999999 8999987543221 1
Q ss_pred HhhcChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 002255 815 RMHINKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAE 874 (947)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~ 874 (947)
..+..... .+.+...+.++.+|+.+||+.||++|||++||++.|+++.+
T Consensus 241 ---------~~i~~~~~--~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~ 289 (299)
T 4asz_A 241 ---------ECITQGRV--LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAK 289 (299)
T ss_dssp ---------HHHHHTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---------HHHHcCCC--CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 11111111 11112234568899999999999999999999999998865
No 3
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.8e-52 Score=449.61 Aligned_cols=261 Identities=26% Similarity=0.481 Sum_probs=209.1
Q ss_pred cCCCcCceecccCceEEEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEEEe
Q 002255 590 NNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVYEY 669 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 669 (947)
++|++.++||+|+||+||+|+++ ..||||+++....+....++|.+|++++++++|||||+++|++.+ +..++||||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy 112 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQW 112 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred HHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEc
Confidence 56788899999999999999875 369999998766667778899999999999999999999998864 568999999
Q ss_pred cCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceecCCC
Q 002255 670 MPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPDN 749 (947)
Q Consensus 670 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~ 749 (947)
|++|+|.++++... ..++|.++..|+.|||+||+|||+ ++||||||||+|||+++++.+||+|||+|+.....
T Consensus 113 ~~gGsL~~~l~~~~----~~l~~~~~~~i~~qia~gL~yLH~---~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~ 185 (307)
T 3omv_A 113 CEGSSLYKHLHVQE----TKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp CSSCBHHHHHHTSC----CCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCSSSEEEETTEEEEECCCSSCBC----
T ss_pred CCCCCHHHHHhhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCccCCccCHHHEEECCCCcEEEeeccCceecccC
Confidence 99999999996543 358999999999999999999997 79999999999999999999999999999876543
Q ss_pred CCcceeecccccccccCcccccc---CCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHHH
Q 002255 750 GKHSIETRLAGTFGYLAPEYAVT---GRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKA 826 (947)
Q Consensus 750 ~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 826 (947)
.........+||+.|||||++.+ +.|+.++|||||||++|||+||+.||.+...... +...
T Consensus 186 ~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~----------------~~~~ 249 (307)
T 3omv_A 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ----------------IIFM 249 (307)
T ss_dssp --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH----------------HHHH
T ss_pred CcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHH----------------HHHH
Confidence 33333455789999999999864 4689999999999999999999999976543221 1111
Q ss_pred hhccCC---CChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhh
Q 002255 827 IDRTID---LDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAELW 876 (947)
Q Consensus 827 ~~~~~~---~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~~ 876 (947)
+..... ........+..+.+|+.+||+.||++||||.||++.|+.+++.+
T Consensus 250 ~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l 302 (307)
T 3omv_A 250 VGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp HHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred HhcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence 111111 11112233456889999999999999999999999999887643
No 4
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.7e-52 Score=452.23 Aligned_cols=261 Identities=24% Similarity=0.390 Sum_probs=212.7
Q ss_pred cCCCcCceecccCceEEEEEEEc------CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCee
Q 002255 590 NNFSEENVLGRGGFGTVYKGELH------DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNER 663 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 663 (947)
++++..+.||+|+||+||+|++. +++.||||+++... .....++|.+|+.++++++|||||+++|+|.+++..
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~-~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~ 104 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPL 104 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C-CC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc-ChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEE
Confidence 34566789999999999999863 46889999997543 344567899999999999999999999999999999
Q ss_pred EEEEEecCCCchhhhhhccccc-----------CCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCC
Q 002255 664 LLVYEYMPQGTLSRHLFNRKEE-----------GLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD 732 (947)
Q Consensus 664 ~lV~e~~~~gsL~~~l~~~~~~-----------~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~ 732 (947)
++|||||++|+|.++|..+... ....++|.++++|+.|||+||+|||+ ++||||||||+|||++++
T Consensus 105 ~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLK~~NILl~~~ 181 (308)
T 4gt4_A 105 SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS---HHVVHKDLATRNVLVYDK 181 (308)
T ss_dssp EEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGG
T ss_pred EEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCccccceEECCC
Confidence 9999999999999999754321 12358999999999999999999997 899999999999999999
Q ss_pred CcEEEeecCcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCCccCccchhhHHH
Q 002255 733 MRAKVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDETQSEDSVHLVT 811 (947)
Q Consensus 733 ~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~l~~ 811 (947)
+.+||+|||+|+...............||++|||||++.++.|+.++|||||||++|||+| |+.||.+....+ +..
T Consensus 182 ~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~---~~~ 258 (308)
T 4gt4_A 182 LNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD---VVE 258 (308)
T ss_dssp GCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHH---HHH
T ss_pred CCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHH---HHH
Confidence 9999999999987654333334455689999999999999999999999999999999999 899998654322 111
Q ss_pred HHHHhhcChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 002255 812 WFRRMHINKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSL 872 (947)
Q Consensus 812 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l 872 (947)
. +..... .+.+...+..+.+|+.+||+.||++||+|+||++.|+.+
T Consensus 259 ~-------------i~~~~~--~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 259 M-------------IRNRQV--LPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp H-------------HHTTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred H-------------HHcCCC--CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 1 111111 111223345688999999999999999999999999764
No 5
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.7e-52 Score=455.75 Aligned_cols=252 Identities=23% Similarity=0.386 Sum_probs=207.8
Q ss_pred cCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEEE
Q 002255 590 NNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVYE 668 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 668 (947)
++|++.+.||+|+||.||+|+.+ +|+.||||++..........+.+.+|++++++++|||||++++++.+++..|+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 68999999999999999999875 69999999998776677778899999999999999999999999999999999999
Q ss_pred ecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceecCC
Q 002255 669 YMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPD 748 (947)
Q Consensus 669 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~ 748 (947)
||+||+|.+++..++. ..+++.++..++.||+.||+|||+ ++||||||||+|||+++++.+||+|||+|+....
T Consensus 104 y~~gg~L~~~i~~~~~---~~~~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 177 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKG---VLFQEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS 177 (350)
T ss_dssp CCTTCBHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHHH---TTCEETTCCGGGEEECTTCCEEECSTTEESCCCH
T ss_pred CCCCCcHHHHHHHcCC---CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCCEEEcccccceeecC
Confidence 9999999999965432 347888999999999999999997 8999999999999999999999999999987643
Q ss_pred CCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHHHhh
Q 002255 749 NGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKAID 828 (947)
Q Consensus 749 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 828 (947)
. .......+||+.|||||++.+..|+.++|||||||++|||++|+.||.+....+ .+..++.
T Consensus 178 ~--~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~----------------~~~~i~~ 239 (350)
T 4b9d_A 178 T--VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKN----------------LVLKIIS 239 (350)
T ss_dssp H--HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH----------------HHHHHHH
T ss_pred C--cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH----------------HHHHHHc
Confidence 2 112344689999999999999999999999999999999999999997654321 1222222
Q ss_pred ccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 829 RTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 829 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
.... +.......++.+|+.+||+.||++|||+.|+++
T Consensus 240 ~~~~--~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 240 GSFP--PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp TCCC--CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCC--CCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 2221 111223456889999999999999999999976
No 6
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=2.1e-51 Score=439.65 Aligned_cols=262 Identities=24% Similarity=0.368 Sum_probs=218.6
Q ss_pred cCCCcCceecccCceEEEEEEEc-CCcEEEEEEeccccc-ChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEE
Q 002255 590 NNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVV-SEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVY 667 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 667 (947)
++|++.++||+|+||+||+|+.+ +|+.||||++.+... .....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 56999999999999999999875 699999999976432 2334578999999999999999999999999999999999
Q ss_pred EecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceecC
Q 002255 668 EYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 747 (947)
Q Consensus 668 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~ 747 (947)
|||+||+|.+++... ..+++.++..++.||+.||+|||+ ++||||||||+|||++.++.+||+|||+|+.+.
T Consensus 112 Ey~~gG~L~~~i~~~-----~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~ 183 (311)
T 4aw0_A 112 SYAKNGELLKYIRKI-----GSFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 183 (311)
T ss_dssp CCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred ecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEEcCCCCEEEEEcCCceecC
Confidence 999999999999653 348899999999999999999997 899999999999999999999999999999876
Q ss_pred CCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHHHh
Q 002255 748 DNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKAI 827 (947)
Q Consensus 748 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 827 (947)
...........+||+.|||||++.+..|+.++||||+||++|||++|+.||.+.... ..+..+.
T Consensus 184 ~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~----------------~~~~~i~ 247 (311)
T 4aw0_A 184 PESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEG----------------LIFAKII 247 (311)
T ss_dssp TTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH----------------HHHHHHH
T ss_pred CCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH----------------HHHHHHH
Confidence 544444445678999999999999999999999999999999999999999765422 1223333
Q ss_pred hccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhCC
Q 002255 828 DRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAELWKP 878 (947)
Q Consensus 828 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~~~~ 878 (947)
...+.++.. ...++.+|+.+||+.||++|||+.|++..-.=..++|..
T Consensus 248 ~~~~~~p~~---~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~ 295 (311)
T 4aw0_A 248 KLEYDFPEK---FFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295 (311)
T ss_dssp HTCCCCCTT---CCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGT
T ss_pred cCCCCCCcc---cCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcC
Confidence 333433322 235678999999999999999999986543333466653
No 7
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=7.7e-51 Score=442.04 Aligned_cols=250 Identities=22% Similarity=0.355 Sum_probs=207.7
Q ss_pred hcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVY 667 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 667 (947)
.+.|+..+.||+|+||.||+|+.+ +|+.||||++..... ...+.+.+|+++|++++|||||++++++.+++..||||
T Consensus 73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~--~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivm 150 (346)
T 4fih_A 73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 150 (346)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC--SSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCch--hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 357999999999999999999875 699999999975532 23456889999999999999999999999999999999
Q ss_pred EecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceecC
Q 002255 668 EYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 747 (947)
Q Consensus 668 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~ 747 (947)
|||++|+|.+++.. ..+++.++..++.||+.||+|||+ ++||||||||+|||++.+|.+||+|||+|+...
T Consensus 151 Ey~~gg~L~~~l~~------~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~ 221 (346)
T 4fih_A 151 EFLEGGALTDIVTH------TRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 221 (346)
T ss_dssp CCCTTEEHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred eCCCCCcHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEECCCCCEEEecCcCceecC
Confidence 99999999998854 238899999999999999999997 899999999999999999999999999999775
Q ss_pred CCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHHHh
Q 002255 748 DNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKAI 827 (947)
Q Consensus 748 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 827 (947)
.... .....+||+.|||||++.+..|+.++|||||||++|||++|+.||.+....+. +..+.
T Consensus 222 ~~~~--~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~----------------~~~i~ 283 (346)
T 4fih_A 222 KEVP--RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA----------------MKMIR 283 (346)
T ss_dssp SSSC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH----------------HHHHH
T ss_pred CCCC--cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH----------------HHHHH
Confidence 4322 23457899999999999999999999999999999999999999976543221 11111
Q ss_pred hccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 828 DRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 828 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
+..............++.+|+.+||+.||++|||+.|+++
T Consensus 284 ~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 284 DNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp HSSCCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cCCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1111101111223456889999999999999999999865
No 8
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=9.9e-51 Score=440.00 Aligned_cols=254 Identities=22% Similarity=0.292 Sum_probs=206.4
Q ss_pred cCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEEE
Q 002255 590 NNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVYE 668 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 668 (947)
+.|+..++||+|+||.||+|+.+ +|+.||||+++.... ..+|+.++++++|||||++++++.+++..|||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmE 130 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFME 130 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 45778889999999999999875 699999999976532 2469999999999999999999999999999999
Q ss_pred ecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCC-cEEEeecCcceecC
Q 002255 669 YMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM-RAKVADFGLVRLAP 747 (947)
Q Consensus 669 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~-~~kl~DfGla~~~~ 747 (947)
||+||+|.+++... ..+++.++..++.||+.||+|||+ ++||||||||+|||++.+| ++||+|||+|+...
T Consensus 131 y~~gg~L~~~l~~~-----~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~ 202 (336)
T 4g3f_A 131 LLEGGSLGQLIKQM-----GCLPEDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQ 202 (336)
T ss_dssp CCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-
T ss_pred ccCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEeCCCCEEEEeeCCCCeEcc
Confidence 99999999999653 348999999999999999999996 8999999999999999998 69999999999775
Q ss_pred CCCCcc---eeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHH
Q 002255 748 DNGKHS---IETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFR 824 (947)
Q Consensus 748 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 824 (947)
...... .....+||+.|||||++.+..|+.++|||||||++|||+||+.||.+....+.. .
T Consensus 203 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~----------------~ 266 (336)
T 4g3f_A 203 PDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLC----------------L 266 (336)
T ss_dssp -----------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCH----------------H
T ss_pred CCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHH----------------H
Confidence 433211 123467999999999999999999999999999999999999999865543321 1
Q ss_pred HHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 002255 825 KAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAE 874 (947)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~ 874 (947)
.+.................+.+++.+||+.||++|||+.|+++.|....+
T Consensus 267 ~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~ 316 (336)
T 4g3f_A 267 KIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQ 316 (336)
T ss_dssp HHHHSCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHcCCCCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence 11111111111112234567899999999999999999999999877654
No 9
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=3.6e-50 Score=428.52 Aligned_cols=246 Identities=24% Similarity=0.387 Sum_probs=200.1
Q ss_pred CcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEe----CCeeEEEE
Q 002255 593 SEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLD----GNERLLVY 667 (947)
Q Consensus 593 ~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lV~ 667 (947)
+..++||+|+||.||+|.+. +++.||+|++..........+.|.+|++++++++|||||++++++.+ +...|+||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 55678999999999999875 68999999998776677777899999999999999999999999865 34579999
Q ss_pred EecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCC--eeecCCCCCcEEEc-CCCcEEEeecCcce
Q 002255 668 EYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQS--FIHRDLKPSNILLG-DDMRAKVADFGLVR 744 (947)
Q Consensus 668 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~--ivHrDlkp~Nill~-~~~~~kl~DfGla~ 744 (947)
|||++|+|.+++... ..+++..+..++.||+.||+|||+ ++ ||||||||+|||++ +++.+||+|||+|+
T Consensus 109 Ey~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~ylH~---~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~ 180 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp ECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCCCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred eCCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCCEEecccChhheeEECCCCCEEEEeCcCCE
Confidence 999999999999653 348999999999999999999997 45 99999999999997 47999999999998
Q ss_pred ecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHH
Q 002255 745 LAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFR 824 (947)
Q Consensus 745 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 824 (947)
..... .....+||+.|||||++.+ .|+.++|||||||++|||+||+.||.+...... +.
T Consensus 181 ~~~~~----~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~----------------~~ 239 (290)
T 3fpq_A 181 LKRAS----FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ----------------IY 239 (290)
T ss_dssp GCCTT----SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH----------------HH
T ss_pred eCCCC----ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHH----------------HH
Confidence 64332 2345689999999998864 699999999999999999999999975432211 11
Q ss_pred HHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 825 KAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
..+..............+++.+|+.+||+.||++|||++|+++
T Consensus 240 ~~i~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 240 RRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp HHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHcCCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1111111111111222346889999999999999999999866
No 10
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=5.6e-50 Score=440.07 Aligned_cols=271 Identities=25% Similarity=0.404 Sum_probs=219.9
Q ss_pred HHHHHhcCCCcCceecccCceEEEEEEEcC------CcEEEEEEecccccChHHHHHHHHHHHHHHcCCC-CCcceEEEE
Q 002255 584 VLRNVTNNFSEENVLGRGGFGTVYKGELHD------GTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRH-RHLVGLLGY 656 (947)
Q Consensus 584 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~------g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~ 656 (947)
..+...++|++.+.||+|+||.||+|.+.. ++.||||+++... .....++|.+|+++|.+++| ||||+++|+
T Consensus 58 ~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~-~~~~~~~~~~E~~il~~l~hhpnIV~l~g~ 136 (353)
T 4ase_A 58 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGA 136 (353)
T ss_dssp HHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred ccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc-ChHHHHHHHHHHHHHHHcCCCCcEEEEEEE
Confidence 334456889999999999999999998652 3679999997653 44556789999999999965 899999999
Q ss_pred EEeC-CeeEEEEEecCCCchhhhhhccccc-----------CCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCC
Q 002255 657 CLDG-NERLLVYEYMPQGTLSRHLFNRKEE-----------GLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKP 724 (947)
Q Consensus 657 ~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~-----------~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp 724 (947)
|.+. +..++|||||++|+|.++|+..... ....++|.++..++.|||+||+|||+ ++||||||||
T Consensus 137 ~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~---~~iiHRDLK~ 213 (353)
T 4ase_A 137 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAA 213 (353)
T ss_dssp ECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSG
T ss_pred EEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhh---CCeecCccCc
Confidence 9764 5689999999999999999764321 12458999999999999999999997 8999999999
Q ss_pred CcEEEcCCCcEEEeecCcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCCccCc
Q 002255 725 SNILLGDDMRAKVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDETQS 803 (947)
Q Consensus 725 ~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~~~~~ 803 (947)
+|||+++++.+||+|||+|+...............||+.|||||++.+..|+.++|||||||++|||+| |+.||.+...
T Consensus 214 ~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~ 293 (353)
T 4ase_A 214 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 293 (353)
T ss_dssp GGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred cceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCH
Confidence 999999999999999999997765544444556789999999999999999999999999999999998 8999976543
Q ss_pred cchhhHHHHHHHhhcChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 002255 804 EDSVHLVTWFRRMHINKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAEL 875 (947)
Q Consensus 804 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~ 875 (947)
.+. +.+.+..... ...+.....++.+++.+||+.||++|||+.||++.|+++.+.
T Consensus 294 ~~~----------------~~~~i~~g~~-~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 294 DEE----------------FCRRLKEGTR-MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp SHH----------------HHHHHHHTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHH----------------HHHHHHcCCC-CCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 221 1111211111 011112345688999999999999999999999999988753
No 11
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.2e-49 Score=443.44 Aligned_cols=250 Identities=22% Similarity=0.360 Sum_probs=207.6
Q ss_pred hcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVY 667 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 667 (947)
.+.|+..+.||+|+||.||+|+.+ +|+.||||++.... ....+.+.+|+.+|++++|||||++++++.+++..||||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~--~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVm 227 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 227 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTT--CSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccc--hhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEE
Confidence 467999999999999999999875 69999999997653 233456889999999999999999999999999999999
Q ss_pred EecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceecC
Q 002255 668 EYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 747 (947)
Q Consensus 668 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~ 747 (947)
|||+||+|.+++.. ..+++.++..++.||+.||+|||+ ++||||||||+|||++.+|.+||+|||+|+.+.
T Consensus 228 Ey~~gG~L~~~i~~------~~l~e~~~~~~~~qil~aL~ylH~---~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~ 298 (423)
T 4fie_A 228 EFLEGGALTDIVTH------TRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 298 (423)
T ss_dssp ECCTTEEHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSTTTEEECTTCCEEECCCTTCEECC
T ss_pred eCCCCCcHHHHHhc------cCCCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEecCccceECC
Confidence 99999999998854 238899999999999999999997 899999999999999999999999999999775
Q ss_pred CCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHHHh
Q 002255 748 DNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKAI 827 (947)
Q Consensus 748 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 827 (947)
.... .....+||+.|||||++.+..|+.++|||||||++|||++|+.||.+....+. +..+.
T Consensus 299 ~~~~--~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~----------------~~~i~ 360 (423)
T 4fie_A 299 KEVP--RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA----------------MKMIR 360 (423)
T ss_dssp SSCC--CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH----------------HHHHH
T ss_pred CCCc--cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH----------------HHHHH
Confidence 4322 23456899999999999999999999999999999999999999976543221 11111
Q ss_pred hccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 828 DRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 828 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
+..............++.+|+.+||+.||++|||+.|+++
T Consensus 361 ~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 361 DNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp HSCCCCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1111001111123356889999999999999999999865
No 12
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.3e-49 Score=417.18 Aligned_cols=247 Identities=27% Similarity=0.415 Sum_probs=192.6
Q ss_pred cCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccC-hHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEE
Q 002255 590 NNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVS-EKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVY 667 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 667 (947)
++|++.+.||+|+||+||+|..+ +|+.||||++.+.... ....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 68999999999999999999864 6999999999765433 334567999999999999999999999999999999999
Q ss_pred EecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceecC
Q 002255 668 EYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 747 (947)
Q Consensus 668 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~ 747 (947)
||+ +|+|.+++..+ ..+++.++..++.||+.||+|||+ ++|+||||||+|||+++++.+||+|||+|+...
T Consensus 93 Ey~-~g~L~~~l~~~-----~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~ 163 (275)
T 3hyh_A 93 EYA-GNELFDYIVQR-----DKMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT 163 (275)
T ss_dssp ECC-CEEHHHHHHHS-----CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTCCEEECCSSCC----
T ss_pred eCC-CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCChHHeEECCCCCEEEeecCCCeecC
Confidence 999 78999998653 348999999999999999999997 899999999999999999999999999998764
Q ss_pred CCCCcceeecccccccccCccccccCCc-CcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHHH
Q 002255 748 DNGKHSIETRLAGTFGYLAPEYAVTGRV-TTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKA 826 (947)
Q Consensus 748 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 826 (947)
... .....+||+.|||||++.+..+ +.++||||+||++|||++|+.||.+..... .+..+
T Consensus 164 ~~~---~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~----------------~~~~i 224 (275)
T 3hyh_A 164 DGN---FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV----------------LFKNI 224 (275)
T ss_dssp --------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----------------HHHHH
T ss_pred CCC---ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHH----------------HHHHH
Confidence 432 2334689999999999988776 579999999999999999999997643211 12222
Q ss_pred hhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 827 IDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 827 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
......++. ....++.+|+.+||+.||++|||+.|+++
T Consensus 225 ~~~~~~~p~---~~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 225 SNGVYTLPK---FLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp HHTCCCCCT---TSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HcCCCCCCC---CCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 233333222 12356789999999999999999999976
No 13
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3.5e-49 Score=427.75 Aligned_cols=273 Identities=21% Similarity=0.309 Sum_probs=202.7
Q ss_pred cCCCcCceecccCceEEEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCC----eeEE
Q 002255 590 NNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGN----ERLL 665 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~l 665 (947)
.+|.+.++||+|+||+||+|+++ |+.||||++... ......+..|+..+.+++|||||+++++|.+++ ..+|
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~---~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~l 78 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECcc---chhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEE
Confidence 45778899999999999999985 899999998654 222223345666677889999999999998654 5799
Q ss_pred EEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhcc-----CCCeeecCCCCCcEEEcCCCcEEEeec
Q 002255 666 VYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLA-----HQSFIHRDLKPSNILLGDDMRAKVADF 740 (947)
Q Consensus 666 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~-----~~~ivHrDlkp~Nill~~~~~~kl~Df 740 (947)
|||||++|+|.++++.. .++|..+.+++.|+++||+|||+.+ +++||||||||+|||++.++++||+||
T Consensus 79 V~Ey~~~gsL~~~l~~~------~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DF 152 (303)
T 3hmm_A 79 VSDYHEHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp EEECCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCC
T ss_pred EecCCCCCcHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeC
Confidence 99999999999999652 4899999999999999999999731 348999999999999999999999999
Q ss_pred CcceecCCCCCcc--eeecccccccccCccccccC------CcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHH
Q 002255 741 GLVRLAPDNGKHS--IETRLAGTFGYLAPEYAVTG------RVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTW 812 (947)
Q Consensus 741 Gla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~ 812 (947)
|+|+......... .....+||+.|||||++.+. .++.++|||||||++|||+||+.||........... .+
T Consensus 153 Gla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~-~~ 231 (303)
T 3hmm_A 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYY-DL 231 (303)
T ss_dssp TTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTT-TT
T ss_pred CCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccch-hc
Confidence 9998765433221 22346799999999998654 478899999999999999999888754432211000 00
Q ss_pred HHHhhcChhhHH-HHhhccCC--CC--hhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 002255 813 FRRMHINKDTFR-KAIDRTID--LD--EETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAE 874 (947)
Q Consensus 813 ~~~~~~~~~~~~-~~~~~~~~--~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~ 874 (947)
.. ......... .+....+. .+ ....+....+.+|+.+||+.||++||||.||++.|+++.+
T Consensus 232 ~~-~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~ 297 (303)
T 3hmm_A 232 VP-SDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp SC-SSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cc-ccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence 00 000001111 12222221 11 1122445678899999999999999999999999999875
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=9.8e-50 Score=427.10 Aligned_cols=245 Identities=26% Similarity=0.372 Sum_probs=198.0
Q ss_pred cCCCcCceecccCceEEEEEEEc----CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEE
Q 002255 590 NNFSEENVLGRGGFGTVYKGELH----DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLL 665 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 665 (947)
++|++.+.||+|+||+||+|+.. +++.||||+++...........+.+|++++++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 57999999999999999999763 47899999997664444444578899999999999999999999999999999
Q ss_pred EEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCccee
Q 002255 666 VYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 745 (947)
Q Consensus 666 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~ 745 (947)
|||||+||+|.+++... ..+++.++..++.||+.||+|||+ ++||||||||+|||++.++.+||+|||+|+.
T Consensus 104 vmEy~~gg~L~~~l~~~-----~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~ 175 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKE-----VMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKE 175 (304)
T ss_dssp EECCCTTCEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTSCEEEESSEEEEC
T ss_pred EEEcCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHeEEcCCCCEEeccccccee
Confidence 99999999999999653 348999999999999999999997 8999999999999999999999999999986
Q ss_pred cCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHH
Q 002255 746 APDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRK 825 (947)
Q Consensus 746 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 825 (947)
...... .....+||+.|||||++.+..|+.++||||+||++|||+||+.||.+....+ .+..
T Consensus 176 ~~~~~~--~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~----------------~~~~ 237 (304)
T 3ubd_A 176 SIDHEK--KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE----------------TMTM 237 (304)
T ss_dssp -----C--CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----------------HHHH
T ss_pred ccCCCc--cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHH----------------HHHH
Confidence 544322 2334689999999999999999999999999999999999999998654321 1222
Q ss_pred HhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHH
Q 002255 826 AIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMG 863 (947)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 863 (947)
+....+..+. ....++.+|+.+||+.||++|||+.
T Consensus 238 i~~~~~~~p~---~~s~~~~~li~~~L~~dP~~R~ta~ 272 (304)
T 3ubd_A 238 ILKAKLGMPQ---FLSPEAQSLLRMLFKRNPANRLGAG 272 (304)
T ss_dssp HHHCCCCCCT---TSCHHHHHHHHHHTCSSGGGSTTCS
T ss_pred HHcCCCCCCC---cCCHHHHHHHHHHcccCHHHCCCCC
Confidence 3333333222 2335678999999999999999853
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.1e-47 Score=413.72 Aligned_cols=252 Identities=27% Similarity=0.424 Sum_probs=191.9
Q ss_pred cCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCC-------
Q 002255 590 NNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGN------- 661 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------- 661 (947)
++|++.+.||+|+||+||+|+.+ +|+.||||+++... .+...+.+.+|++++++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS-SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 46899999999999999999875 68999999997543 4455678999999999999999999999987544
Q ss_pred -----eeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEE
Q 002255 662 -----ERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAK 736 (947)
Q Consensus 662 -----~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~k 736 (947)
..|+|||||++|+|.+++..+... ...++..++.++.||++||+|||+ ++||||||||+|||++.++.+|
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~~~--~~~~~~~~~~i~~qi~~al~ylH~---~~IiHRDlKp~NILl~~~~~vK 158 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWMNGRCTI--EERERSVCLHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVK 158 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHHHTCCSG--GGSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEE
T ss_pred cCCCcEEEEEEecCCCCcHHHHHHhcCCC--ChhHHHHHHHHHHHHHHHHHHHHH---CcCccccCcHHHeEECCCCcEE
Confidence 368999999999999999764322 335677788999999999999997 8999999999999999999999
Q ss_pred EeecCcceecCCCCCcc----------eeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccch
Q 002255 737 VADFGLVRLAPDNGKHS----------IETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDS 806 (947)
Q Consensus 737 l~DfGla~~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~ 806 (947)
|+|||+|+......... ..+..+||+.|||||++.+..|+.++|||||||++|||++ ||.... +.
T Consensus 159 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~--~~ 233 (299)
T 4g31_A 159 VGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM--ER 233 (299)
T ss_dssp ECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH--HH
T ss_pred EccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc--HH
Confidence 99999998765432211 1234579999999999999999999999999999999996 665321 11
Q ss_pred hhHHHHHHHhhcChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 807 VHLVTWFRRMHINKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 807 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
... +..+.. ...++......+.+.+|+.+||+.||++|||+.|+++
T Consensus 234 ~~~-------------~~~~~~--~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 234 VRT-------------LTDVRN--LKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHH-------------HHHHHT--TCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHH-------------HHHHhc--CCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 000 111111 1223333334456778999999999999999999876
No 16
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=5.5e-46 Score=457.22 Aligned_cols=91 Identities=31% Similarity=0.426 Sum_probs=75.5
Q ss_pred CCCCceeEEEecCCCceeeccccccCCccCCeEeccCCcccccCCCcCCCCCCCCccccccccccccCCCCccce---ee
Q 002255 367 DAGGNITVVNLKNLGLSGTISSNFSRLTSLRQLMLSGNELTGTIPKELTTLPSLEMLDVSNNHLFGKVPNFRQNV---IV 443 (947)
Q Consensus 367 ~~~~~L~~L~Ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~---~~ 443 (947)
..+.+|+.|+|++|+++|.||..|+++++|+.|||++|+|+|.||..++.+++|++||||+|+|+|.||...+.. ..
T Consensus 653 ~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~ 732 (768)
T 3rgz_A 653 GSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPA 732 (768)
T ss_dssp GGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGG
T ss_pred hccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHH
Confidence 345678888888888888999999999999999999999999999999999999999999999999999764432 24
Q ss_pred ecCCCCCCCCCCCC
Q 002255 444 KTDGNPDIGKDSSS 457 (947)
Q Consensus 444 ~~~~n~~~~~~~~~ 457 (947)
.+.||+.+|+.+..
T Consensus 733 ~~~gN~~Lcg~~l~ 746 (768)
T 3rgz_A 733 KFLNNPGLCGYPLP 746 (768)
T ss_dssp GGCSCTEEESTTSC
T ss_pred HhcCCchhcCCCCc
Confidence 57899999987643
No 17
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.4e-45 Score=412.57 Aligned_cols=270 Identities=21% Similarity=0.332 Sum_probs=207.2
Q ss_pred hcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEe------CC
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLD------GN 661 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~ 661 (947)
.++|++.+.||+|+||+||+|+.+ +|+.||||+++.........+.+.+|+++|++++|||||++++++.. .+
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 468999999999999999999875 79999999998766566667889999999999999999999999764 36
Q ss_pred eeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecC
Q 002255 662 ERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 741 (947)
Q Consensus 662 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG 741 (947)
..|+|||||+ |+|.+++... ..+++.++..++.||+.||+|||+ ++||||||||+|||++.++.+||+|||
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~~-----~~l~~~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NIl~~~~~~~Ki~DFG 203 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHSS-----QPLTLEHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFG 203 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTSS-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEEEeCCC-CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CcCcCCCcCccccccCCCCCEEEeecc
Confidence 7899999995 7899988543 358999999999999999999997 899999999999999999999999999
Q ss_pred cceecCCCCC--cceeecccccccccCccccccC-CcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhc
Q 002255 742 LVRLAPDNGK--HSIETRLAGTFGYLAPEYAVTG-RVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHI 818 (947)
Q Consensus 742 la~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~ 818 (947)
+|+.+..... .......+||+.|||||++.+. .++.++||||+||++|||++|++||.+....+....+........
T Consensus 204 la~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~ 283 (398)
T 4b99_A 204 MARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPS 283 (398)
T ss_dssp TCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCC
T ss_pred eeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 9987643221 1223457899999999998775 569999999999999999999999987654433322211111000
Q ss_pred C-------hhhHHHHhhccCCCChhcH-----HHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 819 N-------KDTFRKAIDRTIDLDEETL-----ASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 819 ~-------~~~~~~~~~~~~~~~~~~~-----~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
. .......+..........+ ....++.+|+.+||+.||++|||+.|+++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 284 PAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp GGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 0 0011111111111111111 12346789999999999999999999865
No 18
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=2e-45 Score=407.05 Aligned_cols=205 Identities=25% Similarity=0.406 Sum_probs=173.9
Q ss_pred HHHHHHhcCCCcCceecccCceEEEEEEEc----CCcEEEEEEecccccChHHHHHHHHHHHHHHcC-CCCCcceEEEEE
Q 002255 583 QVLRNVTNNFSEENVLGRGGFGTVYKGELH----DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKV-RHRHLVGLLGYC 657 (947)
Q Consensus 583 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 657 (947)
+.+..+.++|++.++||+|+||+||+|+.+ +++.||||++.... ...++.+|+++++.+ +|||||++++++
T Consensus 14 ~~~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~----~~~~~~~E~~~l~~~~~h~nIv~l~~~~ 89 (361)
T 4f9c_A 14 EAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS----HPIRIAAELQCLTVAGGQDNVMGVKYCF 89 (361)
T ss_dssp HHSGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS----CHHHHHHHHHHHHHTCSBTTBCCCSEEE
T ss_pred HhcCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc----CHHHHHHHHHHHHHhcCCCCCceEEEEE
Confidence 334456789999999999999999999764 46789999986542 235678999999998 699999999999
Q ss_pred EeCCeeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCC-CcEE
Q 002255 658 LDGNERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD-MRAK 736 (947)
Q Consensus 658 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~-~~~k 736 (947)
.+.++.|+||||+++|+|.+++. .+++.++..++.||+.||+|||+ ++||||||||+|||++.+ +.+|
T Consensus 90 ~~~~~~~lvmE~~~g~~L~~~~~--------~l~~~~~~~~~~qll~al~ylH~---~gIiHRDiKPeNiLl~~~~~~~k 158 (361)
T 4f9c_A 90 RKNDHVVIAMPYLEHESFLDILN--------SLSFQEVREYMLNLFKALKRIHQ---FGIVHRDVKPSNFLYNRRLKKYA 158 (361)
T ss_dssp EETTEEEEEEECCCCCCHHHHHT--------TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEE
T ss_pred EECCEEEEEEeCCCcccHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCcCCHHHeEEeCCCCeEE
Confidence 99999999999999999999882 37889999999999999999997 899999999999999877 8999
Q ss_pred EeecCcceecCCCCCc--------------------------ceeecccccccccCccccccC-CcCcccccccHHHHHH
Q 002255 737 VADFGLVRLAPDNGKH--------------------------SIETRLAGTFGYLAPEYAVTG-RVTTKVDVFSFGVILM 789 (947)
Q Consensus 737 l~DfGla~~~~~~~~~--------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~ 789 (947)
|+|||+|+...+.... ...+..+||+.|+|||++.+. .|+.++||||+||++|
T Consensus 159 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ 238 (361)
T 4f9c_A 159 LVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFL 238 (361)
T ss_dssp ECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHH
T ss_pred ECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHH
Confidence 9999999866442211 112335799999999998775 5899999999999999
Q ss_pred HHHhCCCCCCccC
Q 002255 790 ELITGRKALDETQ 802 (947)
Q Consensus 790 elltg~~p~~~~~ 802 (947)
||++|+.||....
T Consensus 239 ell~G~~Pf~~~~ 251 (361)
T 4f9c_A 239 SLLSGRYPFYKAS 251 (361)
T ss_dssp HHHHTCSSSSCCS
T ss_pred HHHHCCCCCCCCC
Confidence 9999999996543
No 19
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2.5e-44 Score=432.34 Aligned_cols=417 Identities=18% Similarity=0.245 Sum_probs=286.6
Q ss_pred CChHHHHHHHHHHHHcCCCC----------CCCCC-CCCCCCC---ceeEeCCCCcEEEEEecCCcccccCcccccCCCC
Q 002255 25 QSSSDAAAMQALKTSLGNPA----------SLGWT-DPDPCKW---KHIQCSPSNRVTRIQIGGQNIEGTLPKELNSLSS 90 (947)
Q Consensus 25 ~~~~~~~~l~~~k~~~~~~~----------~~~w~-~~d~C~w---~gv~C~~~~~v~~l~L~~~~l~g~~p~~l~~l~~ 90 (947)
....|++||.++++++..+. ..+|. +.|||.| .||+|+..+||+.|+|+++++.|.+|++|++|++
T Consensus 27 ~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~~L~~ 106 (636)
T 4eco_A 27 EYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTE 106 (636)
T ss_dssp HHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEECGGGGGCTT
T ss_pred hHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcccccCCCCeEEcCCCCEEEEEecCcccCCcCChHHhcCcc
Confidence 33579999999999986542 12585 5699999 9999988899999999999999999999999999
Q ss_pred CCEEEcccCc----------------------------------------------------------------------
Q 002255 91 LTVLEVMKNK---------------------------------------------------------------------- 100 (947)
Q Consensus 91 L~~L~L~~N~---------------------------------------------------------------------- 100 (947)
|++|+|++|.
T Consensus 107 L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l 186 (636)
T 4eco_A 107 LEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDT 186 (636)
T ss_dssp CCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCTT
T ss_pred ceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhhh
Confidence 9999999984
Q ss_pred --------ccCcCC-CCCCCCCCcEEecCCCcCCCC-----------------Cccccc--CCCCCcEEeccCCCCCCCC
Q 002255 101 --------LTGQIP-SLSGLSSLQEVLFDDNNFTSV-----------------PSDFFK--GLTSLQTISLDYNSFDSWV 152 (947)
Q Consensus 101 --------l~~~~p-~~~~l~~L~~L~L~~n~l~~~-----------------~~~~~~--~l~~L~~L~Ls~N~l~~~~ 152 (947)
++| +| .|+++++|++|+|++|++++. .|..++ ++++|++|+|++|++.+ .
T Consensus 187 ~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~-~ 264 (636)
T 4eco_A 187 QIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLT-K 264 (636)
T ss_dssp TTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCS-S
T ss_pred hhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCc-c
Confidence 445 56 689999999999999999993 555577 99999999999999876 7
Q ss_pred CcccccCCCCCCeEeccCce-eee-ccCcccCCCCC------CCccEEEccCCcccCcCCc--cccC-CCCceeeeccCC
Q 002255 153 IPESLKDATGLQRFSANGAN-ITG-TIPDFLGGDTI------PGLMHLHLAFNFLQGPIPL--SFGK-SSIQTLWLNGQK 221 (947)
Q Consensus 153 ~p~~~~~l~~L~~L~l~~n~-l~~-~~p~~~~~~~l------~~L~~L~Ls~N~l~~~~p~--~~~~-~~L~~L~l~~n~ 221 (947)
+|..++++++|++|++++|+ ++| .+|..++ .+ ++|++|+|++|+++ .+|. .++. .+|+.|++++|.
T Consensus 265 ~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~--~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~ 341 (636)
T 4eco_A 265 LPTFLKALPEMQLINVACNRGISGEQLKDDWQ--ALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQ 341 (636)
T ss_dssp CCTTTTTCSSCCEEECTTCTTSCHHHHHHHHH--HHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCC
T ss_pred ChHHHhcCCCCCEEECcCCCCCccccchHHHH--hhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCc
Confidence 89999999999999999998 998 8998876 44 89999999999999 8887 6765 689999999998
Q ss_pred CCCCCCCchhhhcCCCCCcEEEccCCcCcCCCCCCCCCCC-CCEEEccCCccccCCCccccCCC--CCCeEeccCCcccc
Q 002255 222 GDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPLPDLSGLSS-LQDFSVRDNQLTGIVPSSLVNLH--SLAVVNLTNNLFQG 298 (947)
Q Consensus 222 ~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~-L~~L~l~~N~l~g~~p~~l~~l~--~L~~L~Ls~N~l~g 298 (947)
+...+. .+.++++|+.|+|++|+++..+..+..+++ |++|++++|+++ .+|..+..++ +|+.|+|++|+++|
T Consensus 342 l~g~ip----~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~ 416 (636)
T 4eco_A 342 LEGKLP----AFGSEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGS 416 (636)
T ss_dssp CEEECC----CCEEEEEESEEECCSSEEEECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTT
T ss_pred Cccchh----hhCCCCCCCEEECCCCccccccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCC
Confidence 874443 466778888899999988855556888888 888999988888 7888877755 88888888888888
Q ss_pred cCCCCCCCcccccccCCCCcccCcCCCcCCC-----------------ccceeeecccccC--------ChhhhhccCCC
Q 002255 299 QTPKFNSPVRFDMAKGSNSFCLDDAGVACDG-----------------RVNVLLSIVKSVG--------YPAVLAESWKG 353 (947)
Q Consensus 299 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~l~--------~~~~l~~~~~~ 353 (947)
.+|..+...........+...++...+.+.. ..+.+...+.... ....+......
T Consensus 417 ~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls 496 (636)
T 4eco_A 417 VDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLR 496 (636)
T ss_dssp TTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECC
T ss_pred cchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECc
Confidence 8887655222111122222222222222221 0000000000000 00011111111
Q ss_pred CCCCCCCCCCcccCCCCceeEEEecCCCceeeccccccCCccCCeEec------cCCcccccCCCcCCCCCCCCcccccc
Q 002255 354 NNPCNSDWKGVSCDAGGNITVVNLKNLGLSGTISSNFSRLTSLRQLML------SGNELTGTIPKELTTLPSLEMLDVSN 427 (947)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g~ip~~~~~l~~L~~L~L------s~N~l~g~iP~~l~~l~~L~~L~ls~ 427 (947)
.+........+....+++|+.|+|++|++++ +|..++++++|+.|+| ++|++.+.+|..++.+++|+.|+|++
T Consensus 497 ~N~l~~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 575 (636)
T 4eco_A 497 FNKLTKLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGS 575 (636)
T ss_dssp SSCCCBCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCS
T ss_pred CCcCCccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCC
Confidence 1111100000000244556666666666665 5666666666666666 34555666666666666666666666
Q ss_pred ccccccCCCCcc--ceeeecCCCCCCCC
Q 002255 428 NHLFGKVPNFRQ--NVIVKTDGNPDIGK 453 (947)
Q Consensus 428 N~l~g~iP~~~~--~~~~~~~~n~~~~~ 453 (947)
|+| +.||.... ...+.+.+|+..|-
T Consensus 576 N~l-~~ip~~~~~~L~~L~Ls~N~l~~~ 602 (636)
T 4eco_A 576 NDI-RKVNEKITPNISVLDIKDNPNISI 602 (636)
T ss_dssp SCC-CBCCSCCCTTCCEEECCSCTTCEE
T ss_pred CcC-CccCHhHhCcCCEEECcCCCCccc
Confidence 666 55554321 11344555555543
No 20
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=5.3e-44 Score=393.63 Aligned_cols=283 Identities=38% Similarity=0.706 Sum_probs=233.4
Q ss_pred HHHHHhcCCCcCceecccCceEEEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCee
Q 002255 584 VLRNVTNNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNER 663 (947)
Q Consensus 584 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 663 (947)
++..++++|+..+.||+|+||.||+|.+++|+.||||++... .....+.+.+|++++++++||||+++++++.+++..
T Consensus 33 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 110 (321)
T 2qkw_B 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPE--SSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEM 110 (321)
T ss_dssp CCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSC--CSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCC
T ss_pred HHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEeccc--ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeE
Confidence 345577899999999999999999999888999999998765 334567899999999999999999999999999999
Q ss_pred EEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcc
Q 002255 664 LLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLV 743 (947)
Q Consensus 664 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla 743 (947)
++||||+++|+|.+++..... ....++|.+++.++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++
T Consensus 111 ~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 186 (321)
T 2qkw_B 111 ILIYKYMENGNLKRHLYGSDL-PTMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGIS 186 (321)
T ss_dssp EEEEECCTTCBTGGGSSSSCC-CSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCSTTEEECTTCCEEECCCTTC
T ss_pred EEEEEcCCCCcHHHHHhccCC-CccccCHHHHHHHHHHHHHHHHHhcC---CCeecCCCCHHHEEECCCCCEEEeecccc
Confidence 999999999999999865432 22458999999999999999999997 89999999999999999999999999999
Q ss_pred eecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhH
Q 002255 744 RLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTF 823 (947)
Q Consensus 744 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 823 (947)
+...............||+.|+|||++.+..++.++|||||||++|||++|+.||....+.+......|...... ...+
T Consensus 187 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~ 265 (321)
T 2qkw_B 187 KKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHN-NGQL 265 (321)
T ss_dssp EECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHT-TTCC
T ss_pred cccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccc-cccH
Confidence 876543333333445699999999999888999999999999999999999999987776665555555433222 1112
Q ss_pred HHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 002255 824 RKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAE 874 (947)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~ 874 (947)
...+++.+. ..........+.+++.+||+.||++||++.|+++.|+.+.+
T Consensus 266 ~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~ 315 (321)
T 2qkw_B 266 EQIVDPNLA-DKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315 (321)
T ss_dssp CSSSSSSCT-TCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHhcChhhc-cccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence 222232222 22345666788999999999999999999999999998865
No 21
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.3e-43 Score=411.75 Aligned_cols=250 Identities=23% Similarity=0.360 Sum_probs=202.0
Q ss_pred cCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccC----hHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeE
Q 002255 590 NNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVS----EKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERL 664 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 664 (947)
++|++.++||+|+||.||+|+.+ +|+.||||++.+.... .........++.+++.++|||||++++++.+.+..|
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 67999999999999999999876 6999999999754321 112223334567777889999999999999999999
Q ss_pred EEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcce
Q 002255 665 LVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 744 (947)
Q Consensus 665 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~ 744 (947)
+|||||+||+|.+++... ..+++..+..++.||+.||+|||+ ++||||||||+|||++.+|.+||+|||+|+
T Consensus 269 lVmEy~~GGdL~~~l~~~-----~~l~E~~a~~y~~qIl~aL~yLH~---~gIiHRDLKPeNILld~~G~vKL~DFGlA~ 340 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLSQH-----GVFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLAC 340 (689)
T ss_dssp EEECCCCSCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHeEEeCCCCEEecccceee
Confidence 999999999999999653 348899999999999999999996 899999999999999999999999999999
Q ss_pred ecCCCCCcceeecccccccccCcccccc-CCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhH
Q 002255 745 LAPDNGKHSIETRLAGTFGYLAPEYAVT-GRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTF 823 (947)
Q Consensus 745 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 823 (947)
...... ....+||+.|||||++.. ..|+.++||||+||++|||++|+.||.+....+...+ .
T Consensus 341 ~~~~~~----~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i-------------~ 403 (689)
T 3v5w_A 341 DFSKKK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI-------------D 403 (689)
T ss_dssp ECSSCC----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHH-------------H
T ss_pred ecCCCC----CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHH-------------H
Confidence 775432 234689999999999965 5799999999999999999999999976543332111 1
Q ss_pred HHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHH
Q 002255 824 RKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPD-----MGHVVN 867 (947)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 867 (947)
..+....+..+. ....++.+|+.+||+.||.+|++ +.||++
T Consensus 404 ~~i~~~~~~~p~---~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 404 RMTLTMAVELPD---SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp HHHHHCCCCCCT---TSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred HhhcCCCCCCCc---cCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 222233333222 22356789999999999999998 677765
No 22
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.6e-43 Score=415.82 Aligned_cols=258 Identities=24% Similarity=0.385 Sum_probs=214.7
Q ss_pred HhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEE
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLV 666 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 666 (947)
+.++|++.+.||+|+||.||+|..+ +|+.||+|++... .....+.+.+|+++|+.++|||||++++++.+++..|+|
T Consensus 155 il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~--~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv 232 (573)
T 3uto_A 155 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP--HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMI 232 (573)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--SHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEE
T ss_pred CccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEecc--chhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence 3478999999999999999999875 6999999999765 344567889999999999999999999999999999999
Q ss_pred EEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCC--CcEEEeecCcce
Q 002255 667 YEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD--MRAKVADFGLVR 744 (947)
Q Consensus 667 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~--~~~kl~DfGla~ 744 (947)
||||+||+|.+++..+. ..+++.++..++.||+.||+|||+ ++|+||||||+|||++.+ +.+||+|||+|+
T Consensus 233 ~E~~~gg~L~~~i~~~~----~~l~e~~~~~~~~qi~~al~ylH~---~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~ 305 (573)
T 3uto_A 233 YEFMSGGELFEKVADEH----NKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTA 305 (573)
T ss_dssp EECCCCCBHHHHHTCTT----SCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCSSCE
T ss_pred EeecCCCcHHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhccccCCCCCCEEEeecccee
Confidence 99999999999985432 358999999999999999999997 899999999999999854 899999999999
Q ss_pred ecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHH
Q 002255 745 LAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFR 824 (947)
Q Consensus 745 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 824 (947)
.+.... .....+||+.|||||++.+..|+.++||||+||++|||++|+.||.+....+ .+.
T Consensus 306 ~~~~~~---~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~----------------~~~ 366 (573)
T 3uto_A 306 HLDPKQ---SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE----------------TLR 366 (573)
T ss_dssp ECCTTS---EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH----------------HHH
T ss_pred EccCCC---ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH----------------HHH
Confidence 875532 2344689999999999999999999999999999999999999998654322 122
Q ss_pred HHhhccCCCChhc-HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhCCC
Q 002255 825 KAIDRTIDLDEET-LASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAELWKPA 879 (947)
Q Consensus 825 ~~~~~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~~~~~ 879 (947)
.+......+.... .....++.+|+.+||+.||.+||++.|+++ ++|...
T Consensus 367 ~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~------Hpw~~~ 416 (573)
T 3uto_A 367 NVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALE------HPWLTP 416 (573)
T ss_dssp HHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH------STTTSC
T ss_pred HHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhc------CcCcCC
Confidence 2222222222221 223456789999999999999999999866 677643
No 23
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=3.6e-43 Score=428.37 Aligned_cols=393 Identities=19% Similarity=0.254 Sum_probs=280.0
Q ss_pred CChHHHHHHHHHHHHcCCCCCCCCCC------CCC--CCC------------ceeEeCCCCcEEEEEecCCcccccCccc
Q 002255 25 QSSSDAAAMQALKTSLGNPASLGWTD------PDP--CKW------------KHIQCSPSNRVTRIQIGGQNIEGTLPKE 84 (947)
Q Consensus 25 ~~~~~~~~l~~~k~~~~~~~~~~w~~------~d~--C~w------------~gv~C~~~~~v~~l~L~~~~l~g~~p~~ 84 (947)
+...|++||++||+++.++ +|.. .+| |.| .||+|+..+||+.|+|+++++.|.+|++
T Consensus 266 ~~~~d~~ALl~~k~~l~~~---~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~ip~~ 342 (876)
T 4ecn_A 266 EYIKDYKALKAIWEALDGK---NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVPDA 342 (876)
T ss_dssp HHHHHHHHHHHHHHHTTGG---GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEEECGG
T ss_pred cchHHHHHHHHHHHHcCCC---CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCcCchH
Confidence 3457999999999999876 5632 356 999 9999998899999999999999999999
Q ss_pred ccCCCCCCEEEc-ccCcccCc-----------------------------------------------------------
Q 002255 85 LNSLSSLTVLEV-MKNKLTGQ----------------------------------------------------------- 104 (947)
Q Consensus 85 l~~l~~L~~L~L-~~N~l~~~----------------------------------------------------------- 104 (947)
|++|++|++|+| ++|.++|.
T Consensus 343 l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~~~ 422 (876)
T 4ecn_A 343 IGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSR 422 (876)
T ss_dssp GGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCCCC
T ss_pred HhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccccccc
Confidence 999999999999 77765544
Q ss_pred -----------------CC-CCCCCCCCcEEecCCCcCCC-----------------CCccccc--CCCCCcEEeccCCC
Q 002255 105 -----------------IP-SLSGLSSLQEVLFDDNNFTS-----------------VPSDFFK--GLTSLQTISLDYNS 147 (947)
Q Consensus 105 -----------------~p-~~~~l~~L~~L~L~~n~l~~-----------------~~~~~~~--~l~~L~~L~Ls~N~ 147 (947)
+| .|.++++|++|+|++|+|++ .+|..++ ++++|++|+|++|+
T Consensus 423 l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~ 502 (876)
T 4ecn_A 423 ISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCP 502 (876)
T ss_dssp CCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCT
T ss_pred cchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCC
Confidence 56 68889999999999999998 1344455 99999999999999
Q ss_pred CCCCCCcccccCCCCCCeEeccCce-eee-ccCcccCC-----CCCCCccEEEccCCcccCcCCc--cccC-CCCceeee
Q 002255 148 FDSWVIPESLKDATGLQRFSANGAN-ITG-TIPDFLGG-----DTIPGLMHLHLAFNFLQGPIPL--SFGK-SSIQTLWL 217 (947)
Q Consensus 148 l~~~~~p~~~~~l~~L~~L~l~~n~-l~~-~~p~~~~~-----~~l~~L~~L~Ls~N~l~~~~p~--~~~~-~~L~~L~l 217 (947)
+.+ .+|..++++++|++|+|++|+ ++| .+|..++. ..+++|++|+|++|+++ .+|. .++. .+|+.|+|
T Consensus 503 l~~-~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~L 580 (876)
T 4ecn_A 503 NMT-QLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDC 580 (876)
T ss_dssp TCC-SCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEEC
T ss_pred CCc-cChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEEC
Confidence 876 789999999999999999998 888 88876651 13459999999999999 8888 6765 78999999
Q ss_pred ccCCCCCCCCCchhhhcCCCCCcEEEccCCcCcCCCCCCCCCCC-CCEEEccCCccccCCCccccCCCC--CCeEeccCC
Q 002255 218 NGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPLPDLSGLSS-LQDFSVRDNQLTGIVPSSLVNLHS--LAVVNLTNN 294 (947)
Q Consensus 218 ~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~-L~~L~l~~N~l~g~~p~~l~~l~~--L~~L~Ls~N 294 (947)
++|.+. .++ .+.++++|+.|+|++|+++..++.+..+++ |+.|+|++|+|+ .+|..+..++. |+.|+|++|
T Consensus 581 s~N~l~-~lp----~~~~L~~L~~L~Ls~N~l~~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N 654 (876)
T 4ecn_A 581 VHNKVR-HLE----AFGTNVKLTDLKLDYNQIEEIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYN 654 (876)
T ss_dssp TTSCCC-BCC----CCCTTSEESEEECCSSCCSCCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSS
T ss_pred CCCCcc-cch----hhcCCCcceEEECcCCccccchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCC
Confidence 999888 332 577899999999999999954446888888 999999999999 78988887765 999999999
Q ss_pred cccccCCCCCCCcccccccCCCCcccCcCCCcCCCccceeeecccccCChhhhhccCCCCCCCCCCCCCc------ccCC
Q 002255 295 LFQGQTPKFNSPVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGV------SCDA 368 (947)
Q Consensus 295 ~l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~------~~~~ 368 (947)
+++|.+|....... .....++..++...+.+..--......+..+ .......+......... .|..
T Consensus 655 ~l~g~ip~l~~~l~--~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L------~~L~Ls~N~L~~ip~~~~~~~~~~l~n 726 (876)
T 4ecn_A 655 KIGSEGRNISCSMD--DYKGINASTVTLSYNEIQKFPTELFATGSPI------STIILSNNLMTSIPENSLKPKDGNYKN 726 (876)
T ss_dssp CTTTTSSSCSSCTT--TCCCCCEEEEECCSSCCCSCCHHHHHTTCCC------SEEECCSCCCSCCCTTSSSCTTSCCTT
T ss_pred cCCCccccchhhhc--cccCCCcCEEEccCCcCCccCHHHHccCCCC------CEEECCCCcCCccChHHhccccccccc
Confidence 99998875431110 0111122223333332221000000001111 11111111111000000 0112
Q ss_pred CCceeEEEecCCCceeecccccc--CCccCCeEeccCCcccccCCCcCCCCCCCCcccccc------ccccccCCCCc
Q 002255 369 GGNITVVNLKNLGLSGTISSNFS--RLTSLRQLMLSGNELTGTIPKELTTLPSLEMLDVSN------NHLFGKVPNFR 438 (947)
Q Consensus 369 ~~~L~~L~Ls~n~l~g~ip~~~~--~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ls~------N~l~g~iP~~~ 438 (947)
+++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|+|++ +|.++..+++|+.|+|++ |++.|.+|..+
T Consensus 727 l~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l 802 (876)
T 4ecn_A 727 TYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGI 802 (876)
T ss_dssp GGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTG
T ss_pred cCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHH
Confidence 236666777777666 5666665 66667777777776664 666666666666666654 66666666543
No 24
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.3e-42 Score=379.64 Aligned_cols=265 Identities=31% Similarity=0.488 Sum_probs=208.3
Q ss_pred HhcCCCcCceecccCceEEEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEE
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVY 667 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 667 (947)
..++|++.+.||+|+||.||+|+.. |+.||||++..........+++.+|++++++++||||+++++++.+.+..++||
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT 113 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEE
T ss_pred ChhHceeeeEeecCCCeEEEEEEEC-CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEE
Confidence 3568899999999999999999874 899999999877666777788999999999999999999999999999999999
Q ss_pred EecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCC--eeecCCCCCcEEEcCCCcEEEeecCccee
Q 002255 668 EYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQS--FIHRDLKPSNILLGDDMRAKVADFGLVRL 745 (947)
Q Consensus 668 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~--ivHrDlkp~Nill~~~~~~kl~DfGla~~ 745 (947)
||+++|+|.+++...... ..+++..++.++.||+.||+|||+ .+ |+||||||+||+++.++.+||+|||+++.
T Consensus 114 e~~~~~~L~~~l~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~---~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 188 (309)
T 3p86_A 114 EYLSRGSLYRLLHKSGAR--EQLDERRRLSMAYDVAKGMNYLHN---RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL 188 (309)
T ss_dssp ECCTTCBHHHHHHSTTHH--HHSCHHHHHHHHHHHHHHHHHHHT---SSSCCCCTTCCGGGEEECTTCCEEECCCC----
T ss_pred ecCCCCcHHHHHhhcCCC--CCCCHHHHHHHHHHHHHHHHHHHc---CCCCEECCCCChhhEEEeCCCcEEECCCCCCcc
Confidence 999999999999653321 238899999999999999999996 67 99999999999999999999999999986
Q ss_pred cCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHH
Q 002255 746 APDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRK 825 (947)
Q Consensus 746 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 825 (947)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......+... .+.
T Consensus 189 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~---~~~----------- 252 (309)
T 3p86_A 189 KASTF--LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVA---AVG----------- 252 (309)
T ss_dssp ---------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHH---HHH-----------
T ss_pred ccccc--cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHH-----------
Confidence 54322 12334579999999999999999999999999999999999999997654322110 000
Q ss_pred HhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhC
Q 002255 826 AIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAELWK 877 (947)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~~~ 877 (947)
....... .+......+.+++.+||+.||++||++.++++.|+.+.+...
T Consensus 253 ~~~~~~~---~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~ 301 (309)
T 3p86_A 253 FKCKRLE---IPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAV 301 (309)
T ss_dssp HSCCCCC---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC---
T ss_pred hcCCCCC---CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCC
Confidence 0001111 112233568899999999999999999999999999876544
No 25
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.2e-42 Score=383.71 Aligned_cols=290 Identities=39% Similarity=0.723 Sum_probs=232.5
Q ss_pred eeecHHHHHHHhcCCCcCceecccCceEEEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEE
Q 002255 578 MVISIQVLRNVTNNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYC 657 (947)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 657 (947)
..+++.++..+.++|++.+.||+|+||.||+|+.++|+.||||++..... ......+.+|++++++++||||+++++++
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 96 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFC 96 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC------CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccC-chHHHHHHHHHHHHHhccCCCccceEEEE
Confidence 45778899999999999999999999999999988899999999876532 22234689999999999999999999999
Q ss_pred EeCCeeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEE
Q 002255 658 LDGNERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKV 737 (947)
Q Consensus 658 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl 737 (947)
.+++..++||||+++|+|.+++..... ....++|..+..++.|++.||+|||+.+..+|+||||||+||+++.++.+||
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl 175 (326)
T 3uim_A 97 MTPTERLLVYPYMANGSVASCLRERPE-SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV 175 (326)
T ss_dssp CCSSCCEEEEECCTTCBHHHHHHCCST-TCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEE
T ss_pred ecCCceEEEEEeccCCCHHHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEe
Confidence 999999999999999999999976543 2345899999999999999999999833339999999999999999999999
Q ss_pred eecCcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccC--ccchhhHHHHHHH
Q 002255 738 ADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQ--SEDSVHLVTWFRR 815 (947)
Q Consensus 738 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~--~~~~~~l~~~~~~ 815 (947)
+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.... .........|+..
T Consensus 176 ~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 254 (326)
T 3uim_A 176 GDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 254 (326)
T ss_dssp CCCSSCEECCSSSS-CEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTT
T ss_pred ccCccccccCcccc-cccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHH
Confidence 99999987754332 23445669999999999988899999999999999999999999996332 1222233444433
Q ss_pred hhcChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 002255 816 MHINKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSL 872 (947)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l 872 (947)
... ........+.... ..........+.+++.+|++.||++|||+.||++.|+..
T Consensus 255 ~~~-~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 255 LLK-EKKLEALVDVDLQ-GNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp TTS-SCCSTTSSCTTCT-TSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred Hhh-chhhhhhcChhhc-cccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 222 1122222222222 233456667899999999999999999999999999863
No 26
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=5.4e-42 Score=384.30 Aligned_cols=265 Identities=26% Similarity=0.444 Sum_probs=216.7
Q ss_pred hcCCCcCceecccCceEEEEEEEc--------CCcEEEEEEecccccChHHHHHHHHHHHHHHcC-CCCCcceEEEEEEe
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELH--------DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKV-RHRHLVGLLGYCLD 659 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 659 (947)
.++|++.+.||+|+||.||+|++. ++..||||+++... .....+++.+|+++++++ +||||+++++++.+
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 158 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 158 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC-BHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc-CHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc
Confidence 467899999999999999999763 35679999997652 455677899999999999 89999999999999
Q ss_pred CCeeEEEEEecCCCchhhhhhccccc-----------CCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEE
Q 002255 660 GNERLLVYEYMPQGTLSRHLFNRKEE-----------GLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNIL 728 (947)
Q Consensus 660 ~~~~~lV~e~~~~gsL~~~l~~~~~~-----------~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nil 728 (947)
++..++||||+++|+|.+++...... ....+++.+++.++.||+.||+|||+ ++|+||||||+|||
T Consensus 159 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIl 235 (370)
T 2psq_A 159 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVL 235 (370)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEE
T ss_pred CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchhhEE
Confidence 99999999999999999999764321 12347899999999999999999997 89999999999999
Q ss_pred EcCCCcEEEeecCcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCCccCccchh
Q 002255 729 LGDDMRAKVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDETQSEDSV 807 (947)
Q Consensus 729 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~ 807 (947)
++.++.+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||++ |+.||.+....+..
T Consensus 236 l~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~ 315 (370)
T 2psq_A 236 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 315 (370)
T ss_dssp ECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH
T ss_pred ECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 99999999999999987655433333344567889999999999999999999999999999999 99999765432211
Q ss_pred hHHHHHHHhhcChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 002255 808 HLVTWFRRMHINKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAEL 875 (947)
Q Consensus 808 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~ 875 (947)
..+..... ...+......+.+++.+||+.||++||++.|+++.|+.+...
T Consensus 316 -----------------~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~ 365 (370)
T 2psq_A 316 -----------------KLLKEGHR-MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 365 (370)
T ss_dssp -----------------HHHHTTCC-CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -----------------HHHhcCCC-CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 11111111 111122335688999999999999999999999999998754
No 27
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=2.9e-42 Score=379.57 Aligned_cols=272 Identities=24% Similarity=0.372 Sum_probs=212.9
Q ss_pred cCCCcCceecccCceEEEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCC----eeEE
Q 002255 590 NNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGN----ERLL 665 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~l 665 (947)
++|++.++||+|+||.||+|++. ++.||||++... ......+..|+.++++++|||||++++++.+.. ..++
T Consensus 24 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l 99 (322)
T 3soc_A 24 MPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQ---DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL 99 (322)
T ss_dssp EEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred hhchhhheecccCceEEEEEEEC-CCEEEEEEeecC---chHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence 67899999999999999999886 899999998654 333455677999999999999999999998744 4699
Q ss_pred EEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCC----------CeeecCCCCCcEEEcCCCcE
Q 002255 666 VYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQ----------SFIHRDLKPSNILLGDDMRA 735 (947)
Q Consensus 666 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~----------~ivHrDlkp~Nill~~~~~~ 735 (947)
||||+++|+|.+++... .+++..++.++.|++.||+|||+ . +|+||||||+||+++.++.+
T Consensus 100 v~e~~~~g~L~~~l~~~------~~~~~~~~~i~~qi~~al~~LH~---~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~ 170 (322)
T 3soc_A 100 ITAFHEKGSLSDFLKAN------VVSWNELCHIAETMARGLAYLHE---DIPGLKDGHKPAISHRDIKSKNVLLKNNLTA 170 (322)
T ss_dssp EEECCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHTC---CEEEETTEEECEEECSCCSGGGEEECTTCCE
T ss_pred EEecCCCCCHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHh---hccccccccCCCEEeCCCChHhEEECCCCeE
Confidence 99999999999999552 38999999999999999999996 5 99999999999999999999
Q ss_pred EEeecCcceecCCCCCcceeecccccccccCcccccc-----CCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHH
Q 002255 736 KVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVT-----GRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLV 810 (947)
Q Consensus 736 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~ 810 (947)
||+|||+++...............||+.|+|||++.+ ..++.++|||||||++|||++|+.||............
T Consensus 171 kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~ 250 (322)
T 3soc_A 171 CIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFE 250 (322)
T ss_dssp EECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTH
T ss_pred EEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchh
Confidence 9999999987765433333344679999999999876 35677899999999999999999999876543322222
Q ss_pred HHHHHhhcChhhHHHHh-hccCCC--Ch--hcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 002255 811 TWFRRMHINKDTFRKAI-DRTIDL--DE--ETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAEL 875 (947)
Q Consensus 811 ~~~~~~~~~~~~~~~~~-~~~~~~--~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~ 875 (947)
........ .....+.+ ...... .. ........+.+++.+||+.||++|||+.||++.|+.+.+.
T Consensus 251 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 251 EEIGQHPS-LEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp HHHCSSCC-HHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hhhccCCc-hhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 11111111 11122222 111111 11 1223456688999999999999999999999999998754
No 28
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1e-41 Score=372.92 Aligned_cols=293 Identities=27% Similarity=0.477 Sum_probs=223.9
Q ss_pred CCChHHHHHHHHHHHHcCCCCC-CCCC-CCCCCC--CceeEeCCC---CcEEEEEecCCcccc--cCcccccCCCCCCEE
Q 002255 24 SQSSSDAAAMQALKTSLGNPAS-LGWT-DPDPCK--WKHIQCSPS---NRVTRIQIGGQNIEG--TLPKELNSLSSLTVL 94 (947)
Q Consensus 24 ~~~~~~~~~l~~~k~~~~~~~~-~~w~-~~d~C~--w~gv~C~~~---~~v~~l~L~~~~l~g--~~p~~l~~l~~L~~L 94 (947)
.|.+.|++||++||+++.++.. .+|. +.|||. |.||+|+.. ++|+.|+|+++++.| .+|+.|+++++|++|
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~~l~~W~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L 81 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFL 81 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSEE
T ss_pred CCCHHHHHHHHHHHHhcCCcccccCCCCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCCee
Confidence 4778999999999999987652 3785 468998 999999864 799999999999999 999999999999999
Q ss_pred Eccc-CcccCcCC-CCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCCcccccCCCCCCeEeccCce
Q 002255 95 EVMK-NKLTGQIP-SLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGAN 172 (947)
Q Consensus 95 ~L~~-N~l~~~~p-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~ 172 (947)
+|++ |.+.+.+| .|.++++|++|+|++|++++..|..|..+++|++|+|++|.+.+ .+|..+..+++|++|++++|.
T Consensus 82 ~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~ 160 (313)
T 1ogq_A 82 YIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSG-TLPPSISSLPNLVGITFDGNR 160 (313)
T ss_dssp EEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEES-CCCGGGGGCTTCCEEECCSSC
T ss_pred eCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCC-cCChHHhcCCCCCeEECcCCc
Confidence 9995 99998887 68888888888888888877666667777777777777777754 456666666666666666666
Q ss_pred eeeccCcccCCCCCC-CccEEEccCCcccCcCCccccCCCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccCCcCcC
Q 002255 173 ITGTIPDFLGGDTIP-GLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTG 251 (947)
Q Consensus 173 l~~~~p~~~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~ 251 (947)
+++.+|..++ .++ +|++|+|++|++++.+|..+
T Consensus 161 l~~~~p~~l~--~l~~~L~~L~L~~N~l~~~~~~~~-------------------------------------------- 194 (313)
T 1ogq_A 161 ISGAIPDSYG--SFSKLFTSMTISRNRLTGKIPPTF-------------------------------------------- 194 (313)
T ss_dssp CEEECCGGGG--CCCTTCCEEECCSSEEEEECCGGG--------------------------------------------
T ss_pred ccCcCCHHHh--hhhhcCcEEECcCCeeeccCChHH--------------------------------------------
Confidence 6655555554 343 55555555555554444433
Q ss_pred CCCCCCCCCCCCEEEccCCccccCCCccccCCCCCCeEeccCCcccccCCCCCCCcccccccCCCCcccCcCCCcCCCcc
Q 002255 252 PLPDLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQTPKFNSPVRFDMAKGSNSFCLDDAGVACDGRV 331 (947)
Q Consensus 252 ~~~~~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (947)
..+. |++|++++|++++.+|..+..+++|+.|+|++|++++.+|..
T Consensus 195 -----~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~---------------------------- 240 (313)
T 1ogq_A 195 -----ANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKV---------------------------- 240 (313)
T ss_dssp -----GGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGGC----------------------------
T ss_pred -----hCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCcc----------------------------
Confidence 3333 666777777777677777777777777777777777655431
Q ss_pred ceeeecccccCChhhhhccCCCCCCCCCCCCCcccCCCCceeEEEecCCCceeeccccccCCccCCeEeccCCcccccCC
Q 002255 332 NVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLSGTISSNFSRLTSLRQLMLSGNELTGTIP 411 (947)
Q Consensus 332 ~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP 411 (947)
...++|+.|+|++|+++|.+|..++++++|+.|+|++|+|+|.+|
T Consensus 241 -----------------------------------~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip 285 (313)
T 1ogq_A 241 -----------------------------------GLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285 (313)
T ss_dssp -----------------------------------CCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECC
T ss_pred -----------------------------------cccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCC
Confidence 112367888888888888889999999999999999999999999
Q ss_pred CcCCCCCCCCcccccccc-cccc
Q 002255 412 KELTTLPSLEMLDVSNNH-LFGK 433 (947)
Q Consensus 412 ~~l~~l~~L~~L~ls~N~-l~g~ 433 (947)
.. ..+++|+.|++++|+ ++|.
T Consensus 286 ~~-~~l~~L~~l~l~~N~~lc~~ 307 (313)
T 1ogq_A 286 QG-GNLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp CS-TTGGGSCGGGTCSSSEEEST
T ss_pred CC-ccccccChHHhcCCCCccCC
Confidence 87 889999999999998 6764
No 29
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=9.1e-41 Score=365.41 Aligned_cols=285 Identities=37% Similarity=0.651 Sum_probs=233.3
Q ss_pred eeecHHHHHHHhcCCCcC------ceecccCceEEEEEEEcCCcEEEEEEecccc--cChHHHHHHHHHHHHHHcCCCCC
Q 002255 578 MVISIQVLRNVTNNFSEE------NVLGRGGFGTVYKGELHDGTKIAVKRMESAV--VSEKGFAEFKSEIAVLTKVRHRH 649 (947)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~------~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~n 649 (947)
..+++.++..++++|... +.||+|+||.||+|.. +++.||||++.... ......+.+.+|++++++++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 467889999999999887 9999999999999986 58999999987542 23345678999999999999999
Q ss_pred cceEEEEEEeCCeeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEE
Q 002255 650 LVGLLGYCLDGNERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL 729 (947)
Q Consensus 650 iv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill 729 (947)
|+++++++.+++..++||||+++++|.+++..... ...+++..++.++.|++.||+|||+ .+|+||||||+||++
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nili 166 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG--TPPLSWHMRCKIAQGAANGINFLHE---NHHIHRDIKSANILL 166 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGG--CCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEE
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHhc---CCeecCCCCHHHEEE
Confidence 99999999999999999999999999999865432 2458999999999999999999997 899999999999999
Q ss_pred cCCCcEEEeecCcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhH
Q 002255 730 GDDMRAKVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHL 809 (947)
Q Consensus 730 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l 809 (947)
+.++.+||+|||+++...............||+.|+|||++.+ .++.++||||||+++|||++|+.||..........
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~- 244 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL- 244 (307)
T ss_dssp CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTT-
T ss_pred cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHH-
Confidence 9999999999999987655443333445679999999998764 68999999999999999999999998655433221
Q ss_pred HHHHHHhhcChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 002255 810 VTWFRRMHINKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLA 873 (947)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~ 873 (947)
.+..........+...+++.+. .........+.+++.+|++.||.+||++.++++.|+++.
T Consensus 245 -~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 245 -DIKEEIEDEEKTIEDYIDKKMN--DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp -HHHHHHHTTSCCHHHHSCSSCS--CCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred -HHHHHhhhhhhhhhhhcccccc--ccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 1222222223344555555443 234455677889999999999999999999999999874
No 30
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.8e-41 Score=372.99 Aligned_cols=249 Identities=22% Similarity=0.372 Sum_probs=210.9
Q ss_pred hcCCCcCceecccCceEEEEEEE-cCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGEL-HDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVY 667 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 667 (947)
.++|++.+.||+|+||.||+|.. .+|+.||||++..........+.+.+|++++++++||||+++++++...+..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 46899999999999999999987 57999999999877666777788999999999999999999999999999999999
Q ss_pred EecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceecC
Q 002255 668 EYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 747 (947)
Q Consensus 668 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~ 747 (947)
||+++|+|.+++... ..+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 94 e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 165 (328)
T 3fe3_A 94 EYASGGEVFDYLVAH-----GRMKEKEARSKFRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFT 165 (328)
T ss_dssp CCCTTCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTTCCGGGS
T ss_pred ECCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCCHHHEEEcCCCCEEEeeccCceecC
Confidence 999999999998654 238899999999999999999997 899999999999999999999999999998665
Q ss_pred CCCCcceeecccccccccCccccccCCcC-cccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHHH
Q 002255 748 DNGKHSIETRLAGTFGYLAPEYAVTGRVT-TKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKA 826 (947)
Q Consensus 748 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 826 (947)
... .....+||+.|+|||++.+..++ .++||||+||++|||++|+.||.+....+ ....+
T Consensus 166 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~----------------~~~~i 226 (328)
T 3fe3_A 166 VGG---KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE----------------LRERV 226 (328)
T ss_dssp SSC---GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHH----------------HHHHH
T ss_pred CCC---ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHH----------------HHHHH
Confidence 432 23456899999999999887765 79999999999999999999997654221 11222
Q ss_pred hhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 827 IDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 827 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
.......+.. ....+.+++.+||+.||.+|||+.|+++
T Consensus 227 ~~~~~~~p~~---~s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 227 LRGKYRIPFY---MSTDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp HHCCCCCCTT---SCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred HhCCCCCCCC---CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 2232322221 2345789999999999999999999976
No 31
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=3e-41 Score=366.83 Aligned_cols=251 Identities=22% Similarity=0.362 Sum_probs=207.2
Q ss_pred HhcCCCcCceecccCceEEEEEEE-cCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEE
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGEL-HDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLV 666 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 666 (947)
..++|+..+.||+|+||.||+|.. .+|+.||||++..... ...+.+.+|+.++++++||||+++++++..++..++|
T Consensus 18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 95 (297)
T 3fxz_A 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ--PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (297)
T ss_dssp GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGC--SCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccc--cHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEE
Confidence 347899999999999999999986 4689999999875532 2346788999999999999999999999999999999
Q ss_pred EEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceec
Q 002255 667 YEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 746 (947)
Q Consensus 667 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~ 746 (947)
|||+++|+|.+++... .+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 96 ~e~~~~~~L~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 166 (297)
T 3fxz_A 96 MEYLAGGSLTDVVTET------CMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI 166 (297)
T ss_dssp EECCTTCBHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EECCCCCCHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEECCCCCEEEeeCCCceec
Confidence 9999999999998642 37889999999999999999997 79999999999999999999999999999876
Q ss_pred CCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHHH
Q 002255 747 PDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKA 826 (947)
Q Consensus 747 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 826 (947)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.......... ..
T Consensus 167 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~----------------~~ 228 (297)
T 3fxz_A 167 TPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY----------------LI 228 (297)
T ss_dssp CSTTC--CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH----------------HH
T ss_pred CCccc--ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH----------------HH
Confidence 54332 2334679999999999999999999999999999999999999997654322111 11
Q ss_pred hhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 827 IDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 827 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
.................+.+++.+||+.||++||++.|+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 229 ATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp HHHCSCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HhCCCCCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 11111001111223456789999999999999999999976
No 32
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=5.9e-41 Score=367.38 Aligned_cols=263 Identities=27% Similarity=0.435 Sum_probs=214.4
Q ss_pred cCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEEE
Q 002255 590 NNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVYE 668 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 668 (947)
++|.+.++||+|+||.||+|... +++.||+|++... +....+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 87 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF--DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITE 87 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEE
Confidence 57889999999999999999875 6899999988653 56667889999999999999999999999999999999999
Q ss_pred ecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceecCC
Q 002255 669 YMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPD 748 (947)
Q Consensus 669 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~ 748 (947)
|+++|+|.+++.... ..+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 88 ~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 160 (310)
T 3s95_A 88 YIKGGTLRGIIKSMD----SQYPWSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVD 160 (310)
T ss_dssp CCTTCBHHHHHHHCC----TTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEECTTSCEEECCCTTCEECC-
T ss_pred ecCCCcHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCcCeEEECCCCCEEEeecccceeccc
Confidence 999999999996532 348999999999999999999997 8999999999999999999999999999987654
Q ss_pred CCCcce------------eecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHh
Q 002255 749 NGKHSI------------ETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRM 816 (947)
Q Consensus 749 ~~~~~~------------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~ 816 (947)
...... .....||+.|+|||++.+..++.++||||||+++|||++|..|+..........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~-------- 232 (310)
T 3s95_A 161 EKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDF-------- 232 (310)
T ss_dssp -------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTS--------
T ss_pred ccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHH--------
Confidence 322110 114579999999999999999999999999999999999999987654332110
Q ss_pred hcChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhC
Q 002255 817 HINKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAELWK 877 (947)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~~~ 877 (947)
........+.... ......+.+++.+|++.||++||++.++++.|+.+.....
T Consensus 233 ---~~~~~~~~~~~~~-----~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~ 285 (310)
T 3s95_A 233 ---GLNVRGFLDRYCP-----PNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLA 285 (310)
T ss_dssp ---SBCHHHHHHHTCC-----TTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred ---hhhhhccccccCC-----CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcc
Confidence 0011111111111 0112347899999999999999999999999999986543
No 33
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=3.3e-41 Score=371.41 Aligned_cols=261 Identities=25% Similarity=0.438 Sum_probs=211.7
Q ss_pred hcCCCcCceecccCceEEEEEEEc----CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELH----DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERL 664 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 664 (947)
.++|++.++||+|+||.||+|.+. .+..||||+++... .....+.+.+|+.++++++||||+++++++.+++..+
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 126 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY-TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAM 126 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccE
Confidence 367889999999999999999874 35569999997543 4556678999999999999999999999999999999
Q ss_pred EEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcce
Q 002255 665 LVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 744 (947)
Q Consensus 665 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~ 744 (947)
+||||+++|+|.+++.... ..+++.+++.++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 127 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 199 (325)
T 3kul_A 127 IVTEYMENGSLDTFLRTHD----GQFTIMQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSR 199 (325)
T ss_dssp EEEECCTTCBHHHHHHTTT----TCSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCSSCE
T ss_pred EEeeCCCCCcHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEECCCCCEEECCCCccc
Confidence 9999999999999985432 348999999999999999999997 899999999999999999999999999998
Q ss_pred ecCCCCCc-ceeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhcChhh
Q 002255 745 LAPDNGKH-SIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDETQSEDSVHLVTWFRRMHINKDT 822 (947)
Q Consensus 745 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 822 (947)
........ .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+.
T Consensus 200 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~---------------- 263 (325)
T 3kul_A 200 VLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDV---------------- 263 (325)
T ss_dssp ECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHH----------------
T ss_pred ccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHH----------------
Confidence 77553222 12233456889999999998899999999999999999999 9999976543211
Q ss_pred HHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 002255 823 FRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAEL 875 (947)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~ 875 (947)
...+..... ..........+.+++.+||+.||++||++.+|++.|+.+...
T Consensus 264 -~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~ 314 (325)
T 3kul_A 264 -ISSVEEGYR-LPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRS 314 (325)
T ss_dssp -HHHHHTTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred -HHHHHcCCC-CCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhC
Confidence 111111111 111122345688999999999999999999999999998753
No 34
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.2e-41 Score=383.03 Aligned_cols=261 Identities=28% Similarity=0.414 Sum_probs=212.8
Q ss_pred hcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVY 667 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 667 (947)
.++|.+.+.||+|+||.||+|.++ +++.||||+++.. ......+++.+|++++++++|||||++++++..++..++||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 191 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRET-LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM 191 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTT-SCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEcccc-CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence 357888999999999999999986 7899999998754 24455667899999999999999999999999999999999
Q ss_pred EecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceecC
Q 002255 668 EYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 747 (947)
Q Consensus 668 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~ 747 (947)
||+++|+|.+++.... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 192 e~~~~g~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~ 264 (377)
T 3cbl_A 192 ELVQGGDFLTFLRTEG----ARLRVKTLLQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNVLKISDFGMSREEA 264 (377)
T ss_dssp ECCTTCBHHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECT
T ss_pred EcCCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCcCCcccCHHHEEEcCCCcEEECcCCCceecC
Confidence 9999999999996543 248899999999999999999997 899999999999999999999999999998754
Q ss_pred CCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhcChhhHHHH
Q 002255 748 DNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDETQSEDSVHLVTWFRRMHINKDTFRKA 826 (947)
Q Consensus 748 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 826 (947)
............+++.|+|||++....++.++|||||||++|||++ |+.||......+ ..+.
T Consensus 265 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~-----------------~~~~ 327 (377)
T 3cbl_A 265 DGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ-----------------TREF 327 (377)
T ss_dssp TSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHH-----------------HHHH
T ss_pred CCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-----------------HHHH
Confidence 4211111112235778999999998899999999999999999998 999997654321 1111
Q ss_pred hhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 002255 827 IDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAEL 875 (947)
Q Consensus 827 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~ 875 (947)
+..... .+.+...+..+.+++.+||+.||++||++.++++.|+++.+.
T Consensus 328 ~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 328 VEKGGR-LPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp HHTTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHcCCC-CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 221111 011112335688999999999999999999999999998753
No 35
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.7e-41 Score=372.48 Aligned_cols=253 Identities=25% Similarity=0.417 Sum_probs=200.7
Q ss_pred HHhcCCCcCceecccCceEEEEEEE-cCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEE
Q 002255 587 NVTNNFSEENVLGRGGFGTVYKGEL-HDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLL 665 (947)
Q Consensus 587 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 665 (947)
.+.++|++.+.||+|+||.||+|+. .+|+.||||++...... ...+.+.+|++++++++||||+++++++.+.+..++
T Consensus 7 ~l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l 85 (347)
T 3zgw_A 7 ELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG-SDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFM 85 (347)
T ss_dssp TTTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC----CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HHhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccc-hHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEE
Confidence 3568899999999999999999987 47999999999765432 334678899999999999999999999999999999
Q ss_pred EEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCccee
Q 002255 666 VYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 745 (947)
Q Consensus 666 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~ 745 (947)
||||+++|+|.+++.... .+++.++..++.||+.||+|||+ .+|+||||||+||++++++.+||+|||++..
T Consensus 86 v~E~~~gg~L~~~l~~~~-----~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~kL~DFG~a~~ 157 (347)
T 3zgw_A 86 VLEYCPGGELFDYIISQD-----RLSEEETRVVFRQIVSAVAYVHS---QGYAHRDLKPENLLFDEYHKLKLIDFGLCAK 157 (347)
T ss_dssp EEECCTTCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEeCCCCCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCccHHHEEEcCCCCEEEEeccCccc
Confidence 999999999999986532 48899999999999999999997 8999999999999999999999999999876
Q ss_pred cCCCCCcceeecccccccccCccccccCCc-CcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHH
Q 002255 746 APDNGKHSIETRLAGTFGYLAPEYAVTGRV-TTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFR 824 (947)
Q Consensus 746 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 824 (947)
...... .......||+.|+|||++.+..+ +.++||||+||++|||++|+.||.+....+ ...
T Consensus 158 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~----------------~~~ 220 (347)
T 3zgw_A 158 PKGNKD-YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMA----------------LYK 220 (347)
T ss_dssp ---------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHH----------------HHH
T ss_pred ccCCCC-ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHH----------------HHH
Confidence 544222 22334579999999999988775 889999999999999999999997643221 122
Q ss_pred HHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 002255 825 KAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNV 868 (947)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 868 (947)
.+.......+.. ....+.+++.+||+.||++|||+.|+++.
T Consensus 221 ~i~~~~~~~p~~---~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 221 KIMRGKYDVPKW---LSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp HHHHTCCCCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred HHHcCCCCCCCC---CCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 223333332221 23457799999999999999999999874
No 36
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=6.8e-41 Score=368.35 Aligned_cols=254 Identities=23% Similarity=0.352 Sum_probs=204.5
Q ss_pred hcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVY 667 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 667 (947)
.++|++.+.||+|+||.||+|... +++.||||++..... ....+.+.+|+.+++.++||||+++++++.+++..++||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~ 84 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc-cchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 478999999999999999999876 789999999865432 223467889999999999999999999999999999999
Q ss_pred EecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceecC
Q 002255 668 EYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 747 (947)
Q Consensus 668 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~ 747 (947)
||+++|+|.+++... ..+++.++..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 85 e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 156 (323)
T 3tki_A 85 EYCSGGELFDRIEPD-----IGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFR 156 (323)
T ss_dssp ECCTTEEGGGGSBTT-----TBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECE
T ss_pred EcCCCCcHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccccchHHEEEeCCCCEEEEEeeccceec
Confidence 999999999988542 348899999999999999999997 899999999999999999999999999998764
Q ss_pred CCCCcceeecccccccccCccccccCCc-CcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHHH
Q 002255 748 DNGKHSIETRLAGTFGYLAPEYAVTGRV-TTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKA 826 (947)
Q Consensus 748 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 826 (947)
............||+.|+|||++.+..+ +.++|||||||++|||++|+.||........ .+...
T Consensus 157 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~---------------~~~~~ 221 (323)
T 3tki_A 157 YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ---------------EYSDW 221 (323)
T ss_dssp ETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSH---------------HHHHH
T ss_pred cCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHH---------------HHHHH
Confidence 4333333445689999999999987765 7799999999999999999999976543221 11111
Q ss_pred hhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 827 IDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 827 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
...... ..........+.+|+.+||+.||++||++.|+++
T Consensus 222 ~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 222 KEKKTY-LNPWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp HTTCTT-STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hccccc-CCccccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 111111 1111223356789999999999999999999865
No 37
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=1.8e-40 Score=364.76 Aligned_cols=260 Identities=22% Similarity=0.357 Sum_probs=212.0
Q ss_pred eecHHHHHHHhcC----------CCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCC
Q 002255 579 VISIQVLRNVTNN----------FSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRH 647 (947)
Q Consensus 579 ~~~~~~~~~~~~~----------~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h 647 (947)
.+++++++.+++. |...+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+.++++++|
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h 101 (321)
T 2c30_A 24 VVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK--QQRRELLFNEVVIMRDYQH 101 (321)
T ss_dssp -CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT--CCSHHHHHHHHHHHTTCCC
T ss_pred cCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc--hhHHHHHHHHHHHHHhCCC
Confidence 3566777776654 677789999999999999886 79999999987553 3345678999999999999
Q ss_pred CCcceEEEEEEeCCeeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcE
Q 002255 648 RHLVGLLGYCLDGNERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNI 727 (947)
Q Consensus 648 ~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Ni 727 (947)
|||+++++++..++..++||||+++++|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||
T Consensus 102 ~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~------~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NI 172 (321)
T 2c30_A 102 FNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ------VRLNEEQIATVCEAVLQALAYLHA---QGVIHRDIKSDSI 172 (321)
T ss_dssp TTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGE
T ss_pred CCcceEEEEEEECCEEEEEEecCCCCCHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHE
Confidence 9999999999999999999999999999998853 248999999999999999999997 8999999999999
Q ss_pred EEcCCCcEEEeecCcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchh
Q 002255 728 LLGDDMRAKVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSV 807 (947)
Q Consensus 728 ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~ 807 (947)
+++.++.+||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+.
T Consensus 173 ll~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~- 249 (321)
T 2c30_A 173 LLTLDGRVKLSDFGFCAQISKDVP--KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQA- 249 (321)
T ss_dssp EECTTCCEEECCCTTCEECCSSSC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-
T ss_pred EECCCCcEEEeeeeeeeecccCcc--ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-
Confidence 999999999999999987654322 22346799999999999998999999999999999999999999976542211
Q ss_pred hHHHHHHHhhcChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 808 HLVTWFRRMHINKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 808 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
.. .+.................+.+++.+||+.||++||++.|+++
T Consensus 250 --~~-------------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 250 --MK-------------RLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp --HH-------------HHHHSSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred --HH-------------HHhcCCCCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11 1111111101111123356789999999999999999999976
No 38
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.6e-40 Score=369.77 Aligned_cols=253 Identities=25% Similarity=0.353 Sum_probs=209.6
Q ss_pred HhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccCh----HHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCe
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSE----KGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNE 662 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 662 (947)
+.++|++.+.||+|+||.||+|..+ +|+.||+|+++...... ...+.+.+|+.++++++||||+++++++.+++.
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 89 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD 89 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence 5678999999999999999999876 68999999997654322 135688999999999999999999999999999
Q ss_pred eEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCC----cEEEe
Q 002255 663 RLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM----RAKVA 738 (947)
Q Consensus 663 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~----~~kl~ 738 (947)
.++||||+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+||+++.++ .+||+
T Consensus 90 ~~lv~e~~~gg~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~~~vkl~ 161 (361)
T 2yab_A 90 VVLILELVSGGELFDFLAQK-----ESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLI 161 (361)
T ss_dssp EEEEEECCCSCBHHHHHTTC-----SCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEEC
T ss_pred EEEEEEcCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeCCCCCccCEEEE
Confidence 99999999999999998542 348999999999999999999997 8999999999999998877 79999
Q ss_pred ecCcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhc
Q 002255 739 DFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHI 818 (947)
Q Consensus 739 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~ 818 (947)
|||+++....... .....||+.|+|||++.+..++.++|||||||++|||++|..||.+....+
T Consensus 162 DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~------------- 225 (361)
T 2yab_A 162 DFGLAHEIEDGVE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE------------- 225 (361)
T ss_dssp CCSSCEECCTTCC---CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH-------------
T ss_pred ecCCceEcCCCCc---cccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH-------------
Confidence 9999987755322 234579999999999998899999999999999999999999997654221
Q ss_pred ChhhHHHHhhccCCCChhc-HHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 819 NKDTFRKAIDRTIDLDEET-LASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
.+..+......++... ......+.+|+.+||..||++||++.|+++
T Consensus 226 ---~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 226 ---TLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp ---HHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ---HHHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1222222233322221 122345789999999999999999999876
No 39
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=5.3e-41 Score=359.77 Aligned_cols=256 Identities=29% Similarity=0.477 Sum_probs=211.8
Q ss_pred cCCCcCceecccCceEEEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEEEe
Q 002255 590 NNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVYEY 669 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 669 (947)
++|++.+.||+|+||.||+|...+++.||+|++...... .+++.+|++++++++||||+++++++.+++..++||||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF 86 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBC---HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccccC---HHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEe
Confidence 578889999999999999999988999999999865433 35789999999999999999999999999999999999
Q ss_pred cCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceecCCC
Q 002255 670 MPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPDN 749 (947)
Q Consensus 670 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~ 749 (947)
+++++|.+++.... ..+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 87 ~~~~~L~~~l~~~~----~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 159 (269)
T 4hcu_A 87 MEHGCLSDYLRTQR----GLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 159 (269)
T ss_dssp CTTCBHHHHHHTTT----TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred CCCCcHHHHHHhcC----cccCHHHHHHHHHHHHHHHHHHHh---CCeecCCcchheEEEcCCCCEEecccccccccccc
Confidence 99999999986533 358899999999999999999997 89999999999999999999999999999866442
Q ss_pred CCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhcChhhHHHHhh
Q 002255 750 GKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDETQSEDSVHLVTWFRRMHINKDTFRKAID 828 (947)
Q Consensus 750 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 828 (947)
. ........||+.|+|||++.+..++.++||||||+++|||++ |+.||......+. ...+..
T Consensus 160 ~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~----------------~~~~~~ 222 (269)
T 4hcu_A 160 Q-YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV----------------VEDIST 222 (269)
T ss_dssp H-HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH----------------HHHHHT
T ss_pred c-cccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHH----------------HHHHhc
Confidence 1 122233467888999999998899999999999999999999 9999976543211 111111
Q ss_pred ccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 002255 829 RTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAE 874 (947)
Q Consensus 829 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~ 874 (947)
. .. ...+......+.+++.+|++.||++||+++++++.|+++.+
T Consensus 223 ~-~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 223 G-FR-LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp T-CC-CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred C-cc-CCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 1 11 01111223568899999999999999999999999999875
No 40
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1e-40 Score=364.23 Aligned_cols=265 Identities=26% Similarity=0.479 Sum_probs=207.5
Q ss_pred hcCCCcCceecccCceEEEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEEE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVYE 668 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 668 (947)
.++|.+.++||+|+||.||+|.+. ..+|+|+++.........+.+.+|++++++++||||+++++++. .+..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence 367899999999999999999764 46999998876656677789999999999999999999999865 556899999
Q ss_pred ecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceecCC
Q 002255 669 YMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPD 748 (947)
Q Consensus 669 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~ 748 (947)
|+++++|.+++.... ..+++.+++.++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 112 ~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~ 184 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQE----TKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp CCSSCBHHHHHHTSC----CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCSSSEEECTTSCEEECCCCSSCC---
T ss_pred cCCCCcHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHh---CCEeeCCCChhhEEEcCCCCEEEccCCCceeccc
Confidence 999999999986432 458999999999999999999997 7999999999999999999999999999986543
Q ss_pred CCCcceeecccccccccCccccc---cCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHH
Q 002255 749 NGKHSIETRLAGTFGYLAPEYAV---TGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRK 825 (947)
Q Consensus 749 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 825 (947)
...........||+.|+|||++. +..++.++|||||||++|||++|+.||......+.. ...+....
T Consensus 185 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~--~~~~~~~~-------- 254 (307)
T 3lb7_A 185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQI--IFMVGRGY-------- 254 (307)
T ss_dssp ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHH--HHHHHHTC--------
T ss_pred ccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHH--HHHHhcCC--------
Confidence 22223334467999999999886 567889999999999999999999999765432211 11111000
Q ss_pred HhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhh
Q 002255 826 AIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAELW 876 (947)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~~ 876 (947)
..+ ............+.+++.+|++.+|++||++.|+++.|+.+.+.+
T Consensus 255 -~~~--~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~ 302 (307)
T 3lb7_A 255 -ASP--DLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp -CCC--CSTTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred -CCc--chhhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhc
Confidence 000 001111123356889999999999999999999999999887543
No 41
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1e-40 Score=376.25 Aligned_cols=267 Identities=29% Similarity=0.435 Sum_probs=218.2
Q ss_pred hcCCCcCceecccCceEEEEEEEc--------CCcEEEEEEecccccChHHHHHHHHHHHHHHcC-CCCCcceEEEEEEe
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELH--------DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKV-RHRHLVGLLGYCLD 659 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 659 (947)
.++|.+.++||+|+||.||+|+.. .+..||||+++.. ......+++.+|+++++++ +|||||++++++.+
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccc-cCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 468899999999999999999863 2457999999765 3556678899999999999 99999999999999
Q ss_pred CCeeEEEEEecCCCchhhhhhccccc-----------CCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEE
Q 002255 660 GNERLLVYEYMPQGTLSRHLFNRKEE-----------GLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNIL 728 (947)
Q Consensus 660 ~~~~~lV~e~~~~gsL~~~l~~~~~~-----------~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nil 728 (947)
++..++||||+++|+|.+++...... ....+++.+++.++.||+.||+|||+ .+|+||||||+|||
T Consensus 147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIl 223 (382)
T 3tt0_A 147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVL 223 (382)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEE
T ss_pred CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCcceEE
Confidence 99999999999999999999765421 12358999999999999999999997 79999999999999
Q ss_pred EcCCCcEEEeecCcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCCccCccchh
Q 002255 729 LGDDMRAKVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDETQSEDSV 807 (947)
Q Consensus 729 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~ 807 (947)
++.++.+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||++ |+.||......+
T Consensus 224 l~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~-- 301 (382)
T 3tt0_A 224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-- 301 (382)
T ss_dssp ECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--
T ss_pred EcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH--
Confidence 99999999999999987655433333444568899999999999999999999999999999999 999997654221
Q ss_pred hHHHHHHHhhcChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhC
Q 002255 808 HLVTWFRRMHINKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAELWK 877 (947)
Q Consensus 808 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~~~ 877 (947)
+.+.+..... ..........+.+++.+||+.||++||++.||++.|+++.....
T Consensus 302 ---------------~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~ 355 (382)
T 3tt0_A 302 ---------------LFKLLKEGHR-MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTS 355 (382)
T ss_dssp ---------------HHHHHHTTCC-CCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSC
T ss_pred ---------------HHHHHHcCCC-CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHh
Confidence 1111111111 01111233568899999999999999999999999999876543
No 42
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=1.2e-40 Score=356.84 Aligned_cols=257 Identities=27% Similarity=0.409 Sum_probs=212.8
Q ss_pred hcCCCcCceecccCceEEEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEEE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVYE 668 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 668 (947)
.++|++.+.||+|+||.||+|+.+++..||||+++..... .+++.+|++++++++||||+++++++.++...++|||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS---EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTE 83 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBC---HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCc---HHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEE
Confidence 4678999999999999999999998889999999765333 3578999999999999999999999999999999999
Q ss_pred ecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceecCC
Q 002255 669 YMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPD 748 (947)
Q Consensus 669 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~ 748 (947)
|+++++|.+++.... ..+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 84 ~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~ 156 (268)
T 3sxs_A 84 YISNGCLLNYLRSHG----KGLEPSQLLEMCYDVCEGMAFLES---HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD 156 (268)
T ss_dssp CCTTCBHHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCSGGGEEECTTCCEEECCTTCEEECCT
T ss_pred ccCCCcHHHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCcceEEECCCCCEEEccCccceecch
Confidence 999999999996643 348899999999999999999997 8999999999999999999999999999987755
Q ss_pred CCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhcChhhHHHHh
Q 002255 749 NGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDETQSEDSVHLVTWFRRMHINKDTFRKAI 827 (947)
Q Consensus 749 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 827 (947)
... .......+|+.|+|||++.+..++.++||||||+++|||++ |+.||......+. .....
T Consensus 157 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~----------------~~~~~ 219 (268)
T 3sxs_A 157 DQY-VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEV----------------VLKVS 219 (268)
T ss_dssp TCE-EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHH----------------HHHHH
T ss_pred hhh-hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHH----------------HHHHH
Confidence 332 22334557788999999998899999999999999999999 9999976543211 11111
Q ss_pred hccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 002255 828 DRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAE 874 (947)
Q Consensus 828 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~ 874 (947)
..... ..+......+.+++.+|++.||++||++.|+++.|+.+.+
T Consensus 220 ~~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (268)
T 3sxs_A 220 QGHRL--YRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE 264 (268)
T ss_dssp TTCCC--CCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred cCCCC--CCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence 11111 0111123468899999999999999999999999998764
No 43
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1e-40 Score=368.83 Aligned_cols=275 Identities=16% Similarity=0.206 Sum_probs=218.9
Q ss_pred hcCCCcCceecccCceEEEEEEE-cCCcEEEEEEecccccChHHHHHHHHHHHHHHcC-CCCCcceEEEEEEeCCeeEEE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGEL-HDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKV-RHRHLVGLLGYCLDGNERLLV 666 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV 666 (947)
.++|++.+.||+|+||.||+|.. .+|+.||||++..... .+.+.+|+++++++ +||||+++++++..++..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv 83 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR----APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMV 83 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS----SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc----hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEE
Confidence 46799999999999999999986 4789999999875421 24578999999999 999999999999999999999
Q ss_pred EEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCc-----EEEeecC
Q 002255 667 YEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR-----AKVADFG 741 (947)
Q Consensus 667 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~-----~kl~DfG 741 (947)
|||+ +++|.+++.... ..+++.+++.++.|++.||+|||+ .+|+||||||+|||++.++. +||+|||
T Consensus 84 ~e~~-~~~L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~---~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg 155 (330)
T 2izr_A 84 LELL-GPSLEDLFDLCD----RTFSLKTVLMIAIQLISRMEYVHS---KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFA 155 (330)
T ss_dssp EECC-CCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTCTTSEEECCCT
T ss_pred EEeC-CCCHHHHHHHcC----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeeccCCCCCCceEEEEEcc
Confidence 9999 999999986532 358999999999999999999997 79999999999999998887 9999999
Q ss_pred cceecCCCCCcc-----eeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHh
Q 002255 742 LVRLAPDNGKHS-----IETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRM 816 (947)
Q Consensus 742 la~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~ 816 (947)
+++......... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+.......+...
T Consensus 156 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~ 235 (330)
T 2izr_A 156 LAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDT 235 (330)
T ss_dssp TCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHH
T ss_pred cceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhh
Confidence 998764432211 123568999999999999999999999999999999999999999876544332222222111
Q ss_pred hcChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhCCCCCCCCCcc
Q 002255 817 HINKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAELWKPAEPDSDDIY 887 (947)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~~~~~~~~~~~~~ 887 (947)
.. ........... +.+.+++.+|++.||.+||++.+|.+.|+++.+..........+|.
T Consensus 236 ~~-----------~~~~~~~~~~~-p~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~~~~~~~dw~ 294 (330)
T 2izr_A 236 KR-----------ATPIEVLCENF-PEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDWI 294 (330)
T ss_dssp HH-----------HSCHHHHTTTC-HHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCCSCCCTTT
T ss_pred hc-----------cCCHHHHhccC-hHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCccCC
Confidence 00 00000000011 2688999999999999999999999999998877655555455554
No 44
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=5e-41 Score=376.68 Aligned_cols=260 Identities=26% Similarity=0.482 Sum_probs=201.1
Q ss_pred hcCCCcCceecccCceEEEEEEEc----CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELH----DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERL 664 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 664 (947)
.++|++.+.||+|+||.||+|+++ ++..||||+++... .....+++.+|+.++++++||||+++++++.+++..+
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 122 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM 122 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceE
Confidence 357999999999999999999865 57789999997643 4556678999999999999999999999999999999
Q ss_pred EEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcce
Q 002255 665 LVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 744 (947)
Q Consensus 665 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~ 744 (947)
+||||+++|+|.+++.... ..+++.+++.++.||++||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 123 lv~e~~~~~sL~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 195 (373)
T 2qol_A 123 IVTEYMENGSLDSFLRKHD----AQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGR 195 (373)
T ss_dssp EEEECCTTCBHHHHHHTTT----TCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC----
T ss_pred EEEeCCCCCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEEcCCCCEEECcCcccc
Confidence 9999999999999996532 358999999999999999999997 799999999999999999999999999998
Q ss_pred ecCCCCCcc-eeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhcChhh
Q 002255 745 LAPDNGKHS-IETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDETQSEDSVHLVTWFRRMHINKDT 822 (947)
Q Consensus 745 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 822 (947)
......... ......+++.|+|||++.+..++.++|||||||++|||++ |+.||......+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~----------------- 258 (373)
T 2qol_A 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD----------------- 258 (373)
T ss_dssp ------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHH-----------------
T ss_pred ccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH-----------------
Confidence 765432211 1222345788999999999999999999999999999998 999997654221
Q ss_pred HHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 002255 823 FRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAE 874 (947)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~ 874 (947)
..+.+...... +........+.+++.+|++.||++||++.+|++.|+.+..
T Consensus 259 ~~~~i~~~~~~-~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~ 309 (373)
T 2qol_A 259 VIKAVDEGYRL-PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309 (373)
T ss_dssp HHHHHHTTEEC-CCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCC-CCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHh
Confidence 11111111110 1111234568899999999999999999999999999865
No 45
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-40 Score=364.37 Aligned_cols=251 Identities=20% Similarity=0.297 Sum_probs=209.6
Q ss_pred HhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEE
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLV 666 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 666 (947)
+.++|++.+.||+|+||.||+|... +++.||+|.+... ......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 3 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 79 (321)
T 1tki_A 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK---GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMI 79 (321)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC---THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC---cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEE
Confidence 4578999999999999999999876 5889999998743 34456789999999999999999999999999999999
Q ss_pred EEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcC--CCcEEEeecCcce
Q 002255 667 YEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD--DMRAKVADFGLVR 744 (947)
Q Consensus 667 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~--~~~~kl~DfGla~ 744 (947)
|||+++|+|.+++.... ..+++.++..++.||+.||+|||+ .+|+||||||+||+++. ++.+||+|||+++
T Consensus 80 ~e~~~g~~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~---~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~ 152 (321)
T 1tki_A 80 FEFISGLDIFERINTSA----FELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQAR 152 (321)
T ss_dssp ECCCCCCBHHHHHTSSS----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCTTCE
T ss_pred EEeCCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEccCCCCCEEEEECCCCe
Confidence 99999999999985432 358899999999999999999997 89999999999999987 7899999999998
Q ss_pred ecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHH
Q 002255 745 LAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFR 824 (947)
Q Consensus 745 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 824 (947)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .+.
T Consensus 153 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~----------------~~~ 213 (321)
T 1tki_A 153 QLKPGD---NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ----------------IIE 213 (321)
T ss_dssp ECCTTC---EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHH----------------HHH
T ss_pred ECCCCC---ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHH----------------HHH
Confidence 875532 2334579999999999998889999999999999999999999997654221 122
Q ss_pred HHhhccCCCChhcH-HHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 825 KAIDRTIDLDEETL-ASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 825 ~~~~~~~~~~~~~~-~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
.+............ ....++.+++.+||+.||++|||+.|+++
T Consensus 214 ~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 214 NIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp HHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 23333333222221 23356789999999999999999999987
No 46
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=6.6e-41 Score=372.74 Aligned_cols=270 Identities=29% Similarity=0.440 Sum_probs=216.0
Q ss_pred HHHhcCCCcCceecccCceEEEEEEEc------CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEe
Q 002255 586 RNVTNNFSEENVLGRGGFGTVYKGELH------DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLD 659 (947)
Q Consensus 586 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 659 (947)
....++|++.+.||+|+||.||+|+.. +++.||||+++... .....+.+.+|++++++++||||+++++++.+
T Consensus 43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 121 (343)
T 1luf_A 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDNPNIVKLLGVCAV 121 (343)
T ss_dssp BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence 345688999999999999999999875 34889999997653 45556789999999999999999999999999
Q ss_pred CCeeEEEEEecCCCchhhhhhcccccC-------------------CCcccHHHHHHHHHHHHHHHHHHhhccCCCeeec
Q 002255 660 GNERLLVYEYMPQGTLSRHLFNRKEEG-------------------LKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHR 720 (947)
Q Consensus 660 ~~~~~lV~e~~~~gsL~~~l~~~~~~~-------------------~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHr 720 (947)
++..++||||+++|+|.+++....... ...+++.+++.++.||++||+|||+ ++|+||
T Consensus 122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~---~~ivH~ 198 (343)
T 1luf_A 122 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHR 198 (343)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCS
T ss_pred CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecC
Confidence 999999999999999999997643211 1468999999999999999999997 899999
Q ss_pred CCCCCcEEEcCCCcEEEeecCcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCC
Q 002255 721 DLKPSNILLGDDMRAKVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALD 799 (947)
Q Consensus 721 Dlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~ 799 (947)
||||+||+++.++.+||+|||+++...............||+.|+|||++.+..++.++||||||+++|||++ |+.||.
T Consensus 199 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 278 (343)
T 1luf_A 199 DLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYY 278 (343)
T ss_dssp CCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred CCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCC
Confidence 9999999999999999999999986644322223344578999999999998899999999999999999999 999997
Q ss_pred ccCccchhhHHHHHHHhhcChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhC
Q 002255 800 ETQSEDSVHLVTWFRRMHINKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAELWK 877 (947)
Q Consensus 800 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~~~ 877 (947)
.....+. ...+.+.... ..+......+.+++.+||+.||++||++.++++.|+++.+.+.
T Consensus 279 ~~~~~~~----------------~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~ 338 (343)
T 1luf_A 279 GMAHEEV----------------IYYVRDGNIL--ACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAE 338 (343)
T ss_dssp TSCHHHH----------------HHHHHTTCCC--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC---
T ss_pred CCChHHH----------------HHHHhCCCcC--CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhh
Confidence 6542211 1111111111 1111233568899999999999999999999999999876543
No 47
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.2e-40 Score=365.68 Aligned_cols=265 Identities=27% Similarity=0.406 Sum_probs=217.0
Q ss_pred hcCCCcCceecccCceEEEEEEE------cCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCe
Q 002255 589 TNNFSEENVLGRGGFGTVYKGEL------HDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNE 662 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 662 (947)
.++|.+.+.||+|+||.||+|.. .+++.||||+++... .....+.+.+|++++++++||||+++++++.+++.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 100 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA-SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC-CHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence 46788999999999999999976 245789999997543 45567889999999999999999999999999999
Q ss_pred eEEEEEecCCCchhhhhhccccc-------------------CCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCC
Q 002255 663 RLLVYEYMPQGTLSRHLFNRKEE-------------------GLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLK 723 (947)
Q Consensus 663 ~~lV~e~~~~gsL~~~l~~~~~~-------------------~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlk 723 (947)
.++||||+++|+|.+++...... ....+++.+++.++.||++||+|||+ ++|+|||||
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dik 177 (314)
T 2ivs_A 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLA 177 (314)
T ss_dssp CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHH---TTEECCCCS
T ss_pred eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHH---CCCcccccc
Confidence 99999999999999999764321 12348899999999999999999997 899999999
Q ss_pred CCcEEEcCCCcEEEeecCcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCCccC
Q 002255 724 PSNILLGDDMRAKVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDETQ 802 (947)
Q Consensus 724 p~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~~~~ 802 (947)
|+||+++.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||....
T Consensus 178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 257 (314)
T 2ivs_A 178 ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP 257 (314)
T ss_dssp GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 9999999999999999999987755443333344567889999999998899999999999999999999 999997654
Q ss_pred ccchhhHHHHHHHhhcChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 002255 803 SEDSVHLVTWFRRMHINKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAEL 875 (947)
Q Consensus 803 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~ 875 (947)
..... ..+..... ..........+.+++.+||+.||++||++.|+++.|+++.+.
T Consensus 258 ~~~~~-----------------~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 258 PERLF-----------------NLLKTGHR-MERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp GGGHH-----------------HHHHTTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHH-----------------HHhhcCCc-CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 33211 11111111 111122335688999999999999999999999999988653
No 48
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=3.6e-41 Score=377.37 Aligned_cols=273 Identities=25% Similarity=0.392 Sum_probs=218.5
Q ss_pred HHHHHHHhcCCCcCceecccCceEEEEEEEc------CCcEEEEEEecccccChHHHHHHHHHHHHHHcC-CCCCcceEE
Q 002255 582 IQVLRNVTNNFSEENVLGRGGFGTVYKGELH------DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKV-RHRHLVGLL 654 (947)
Q Consensus 582 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~ 654 (947)
....+...++|++.+.||+|+||.||+|++. +++.||||+++... .....+.+.+|++++.++ +|||||+++
T Consensus 14 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hpniv~~~ 92 (359)
T 3vhe_A 14 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLL 92 (359)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC-CHHHHHHHHHHHHHHHhhcCCcceeeee
Confidence 3444556789999999999999999999742 46789999997642 445567899999999999 799999999
Q ss_pred EEEEeCCe-eEEEEEecCCCchhhhhhcccccC-----------------------------------------------
Q 002255 655 GYCLDGNE-RLLVYEYMPQGTLSRHLFNRKEEG----------------------------------------------- 686 (947)
Q Consensus 655 ~~~~~~~~-~~lV~e~~~~gsL~~~l~~~~~~~----------------------------------------------- 686 (947)
+++.+.+. .++||||+++|+|.+++.......
T Consensus 93 ~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (359)
T 3vhe_A 93 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKS 172 (359)
T ss_dssp EEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------------
T ss_pred eeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccc
Confidence 99987554 899999999999999997643210
Q ss_pred --------------CCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceecCCCCCc
Q 002255 687 --------------LKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPDNGKH 752 (947)
Q Consensus 687 --------------~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~ 752 (947)
...+++..++.++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++........
T Consensus 173 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 249 (359)
T 3vhe_A 173 LSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 249 (359)
T ss_dssp -----------CTTTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTC
T ss_pred cchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCcEEEEeccceeeecccccc
Confidence 1228899999999999999999997 79999999999999999999999999999876554444
Q ss_pred ceeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhcChhhHHHHhhccC
Q 002255 753 SIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDETQSEDSVHLVTWFRRMHINKDTFRKAIDRTI 831 (947)
Q Consensus 753 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 831 (947)
.......||+.|+|||++.+..++.++|||||||++|||++ |+.||......+.. ...+....
T Consensus 250 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~----------------~~~~~~~~ 313 (359)
T 3vhe_A 250 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF----------------CRRLKEGT 313 (359)
T ss_dssp EEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHH----------------HHHHHHTC
T ss_pred hhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHH----------------HHHHHcCC
Confidence 44455678999999999999999999999999999999998 99999765432211 11111111
Q ss_pred CCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 002255 832 DLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAEL 875 (947)
Q Consensus 832 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~ 875 (947)
. ...+......+.+++.+|++.||++||++.|+++.|+++.+.
T Consensus 314 ~-~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 314 R-MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp C-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred C-CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 1 011112234688999999999999999999999999998754
No 49
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=2e-40 Score=378.79 Aligned_cols=255 Identities=21% Similarity=0.322 Sum_probs=210.8
Q ss_pred HHhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEE
Q 002255 587 NVTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLL 665 (947)
Q Consensus 587 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 665 (947)
.+.++|++.+.||+|+||.||+|... +|+.||+|++..........+.+.+|++++++++|||||++++++.+++..++
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 87 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL 87 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence 45678999999999999999999765 78999999998766556667789999999999999999999999999999999
Q ss_pred EEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEc---CCCcEEEeecCc
Q 002255 666 VYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLG---DDMRAKVADFGL 742 (947)
Q Consensus 666 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~---~~~~~kl~DfGl 742 (947)
||||+++|+|.+++..+ ..+++..+..++.||+.||+|||+ .+|+||||||+|||++ .++.+||+|||+
T Consensus 88 v~E~~~gg~L~~~i~~~-----~~~~e~~~~~i~~qil~aL~~lH~---~givHrDlKp~NIll~~~~~~~~vkL~DFG~ 159 (444)
T 3soa_A 88 IFDLVTGGELFEDIVAR-----EYYSEADASHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGL 159 (444)
T ss_dssp EECCCBCCBHHHHHHHC-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSSTTEEESBSSTTCCEEECCCSS
T ss_pred EEEeCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEeccCCCCcEEEccCce
Confidence 99999999999988653 348899999999999999999997 8999999999999998 568899999999
Q ss_pred ceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhh
Q 002255 743 VRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDT 822 (947)
Q Consensus 743 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 822 (947)
++....... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||.+....+ .
T Consensus 160 a~~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~----------------~ 221 (444)
T 3soa_A 160 AIEVEGEQQ--AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHR----------------L 221 (444)
T ss_dssp CBCCCTTCC--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH----------------H
T ss_pred eEEecCCCc--eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHH----------------H
Confidence 987654322 2234679999999999998899999999999999999999999997644221 1
Q ss_pred HHHHhhccCCCChhc-HHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 823 FRKAIDRTIDLDEET-LASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 823 ~~~~~~~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
+..+........... ......+.+|+.+||+.||++||++.|+++
T Consensus 222 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 222 YQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp HHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 222222222222111 123456889999999999999999999987
No 50
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=4e-41 Score=377.03 Aligned_cols=265 Identities=26% Similarity=0.406 Sum_probs=213.1
Q ss_pred hcCCCcCceecccCceEEEEEEEc------CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCe
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELH------DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNE 662 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 662 (947)
.++|++.+.||+|+||.||+|++. +++.||||+++.. .......++.+|+.++++++|||||++++++.++..
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~ 148 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV-CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 148 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccc-cChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence 467889999999999999999853 4678999998754 345566789999999999999999999999999999
Q ss_pred eEEEEEecCCCchhhhhhccccc--CCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCC---cEEE
Q 002255 663 RLLVYEYMPQGTLSRHLFNRKEE--GLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM---RAKV 737 (947)
Q Consensus 663 ~~lV~e~~~~gsL~~~l~~~~~~--~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~---~~kl 737 (947)
.++||||+++|+|.+++...... ....+++.+++.++.||+.||+|||+ ++|+||||||+|||++.++ .+||
T Consensus 149 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~~~kL 225 (367)
T 3l9p_A 149 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKI 225 (367)
T ss_dssp CEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred CEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEEecCCCCceEEE
Confidence 99999999999999999764321 22358999999999999999999997 8999999999999999555 5999
Q ss_pred eecCcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHh
Q 002255 738 ADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDETQSEDSVHLVTWFRRM 816 (947)
Q Consensus 738 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~l~~~~~~~ 816 (947)
+|||+++...............||+.|+|||++.+..++.++|||||||++|||++ |+.||......+.
T Consensus 226 ~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~---------- 295 (367)
T 3l9p_A 226 GDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV---------- 295 (367)
T ss_dssp CCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH----------
T ss_pred CCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH----------
Confidence 99999975433222223334568999999999999999999999999999999998 9999976542211
Q ss_pred hcChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 002255 817 HINKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAEL 875 (947)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~ 875 (947)
.+.+..... ..........+.+++.+||+.||++||++.+|++.|+.+.+.
T Consensus 296 -------~~~i~~~~~-~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~ 346 (367)
T 3l9p_A 296 -------LEFVTSGGR-MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 346 (367)
T ss_dssp -------HHHHHTTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -------HHHHHcCCC-CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence 111111111 011112334688999999999999999999999999988753
No 51
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.7e-40 Score=370.78 Aligned_cols=255 Identities=23% Similarity=0.382 Sum_probs=211.8
Q ss_pred HHhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEE
Q 002255 587 NVTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLL 665 (947)
Q Consensus 587 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 665 (947)
.+.++|++.+.||+|+||.||+|..+ +|+.||+|++..........+.+.+|++++++++|||||++++++.+++..++
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 105 (362)
T 2bdw_A 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 105 (362)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 45678999999999999999999875 68999999998776666777889999999999999999999999999999999
Q ss_pred EEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCC---CcEEEeecCc
Q 002255 666 VYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD---MRAKVADFGL 742 (947)
Q Consensus 666 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~---~~~kl~DfGl 742 (947)
||||+++|+|.+++..+ ..+++.++..++.||+.||+|||+ .+|+||||||+||+++.+ +.+||+|||+
T Consensus 106 v~e~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~ 177 (362)
T 2bdw_A 106 VFDLVTGGELFEDIVAR-----EFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGL 177 (362)
T ss_dssp EECCCCSCBHHHHHTTC-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred EEecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEeecCc
Confidence 99999999999988543 348899999999999999999997 799999999999999865 4599999999
Q ss_pred ceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhh
Q 002255 743 VRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDT 822 (947)
Q Consensus 743 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 822 (947)
++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .
T Consensus 178 a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~----------------~ 238 (362)
T 2bdw_A 178 AIEVNDSEA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR----------------L 238 (362)
T ss_dssp CBCCTTCCS---CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----------------H
T ss_pred ceEecCCcc---cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH----------------H
Confidence 987654322 234679999999999998899999999999999999999999997644211 1
Q ss_pred HHHHhhccCCCChhc-HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 002255 823 FRKAIDRTIDLDEET-LASISTVADLAGHCCAREPYQRPDMGHVVNV 868 (947)
Q Consensus 823 ~~~~~~~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 868 (947)
+..+........... ......+.+++.+||+.||++||++.|+++.
T Consensus 239 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 239 YAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp HHHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred HHHHHhCCCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 112222222222111 1234567899999999999999999999864
No 52
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.7e-40 Score=369.64 Aligned_cols=257 Identities=23% Similarity=0.339 Sum_probs=208.2
Q ss_pred HhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEeccccc---ChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCee
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVV---SEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNER 663 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 663 (947)
+.++|++.+.||+|+||.||+|..+ +|+.||||++..... .....+.+.+|+.++++++||||+++++++.+++..
T Consensus 22 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 101 (351)
T 3c0i_A 22 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGML 101 (351)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred cccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 3467999999999999999999875 689999999864321 112357789999999999999999999999999999
Q ss_pred EEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCc---EEEeec
Q 002255 664 LLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR---AKVADF 740 (947)
Q Consensus 664 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~---~kl~Df 740 (947)
++||||+++|+|.+++...... ...+++..+..++.||+.||+|||+ ++|+||||||+||+++.++. +||+||
T Consensus 102 ~lv~e~~~g~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH~---~~ivHrDlkp~NIl~~~~~~~~~vkl~Df 177 (351)
T 3c0i_A 102 YMVFEFMDGADLCFEIVKRADA-GFVYSEAVASHYMRQILEALRYCHD---NNIIHRDVKPHCVLLASKENSAPVKLGGF 177 (351)
T ss_dssp EEEEECCSSCBHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECSSSTTCCEEECCC
T ss_pred EEEEeCCCCCCHHHHHHHhccc-CCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChHHeEEecCCCCCcEEEecC
Confidence 9999999999999888654332 2357899999999999999999997 89999999999999987654 999999
Q ss_pred CcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcCh
Q 002255 741 GLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINK 820 (947)
Q Consensus 741 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~ 820 (947)
|+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 178 g~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~----------------- 238 (351)
T 3c0i_A 178 GVAIQLGESGL--VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE----------------- 238 (351)
T ss_dssp TTCEECCTTSC--BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH-----------------
T ss_pred cceeEecCCCe--eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH-----------------
Confidence 99987755322 23345799999999999988999999999999999999999999976321
Q ss_pred hhHHHHhhccCCCChhcH-HHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 821 DTFRKAIDRTIDLDEETL-ASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~-~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
..+..+...........+ .....+.+++.+||+.||++||++.|+++
T Consensus 239 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 239 RLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp HHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 111222222222222111 22356789999999999999999999987
No 53
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=2.8e-40 Score=364.40 Aligned_cols=249 Identities=27% Similarity=0.397 Sum_probs=206.8
Q ss_pred cCCCcCceecccCceEEEEEEEc-CCcEEEEEEeccccc-ChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEE
Q 002255 590 NNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVV-SEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVY 667 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 667 (947)
++|++.+.||+|+||.||+|+.+ +|+.||+|++++... .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 67899999999999999999876 689999999976421 2234567889999999999999999999999999999999
Q ss_pred EecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceecC
Q 002255 668 EYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 747 (947)
Q Consensus 668 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~ 747 (947)
||+++|+|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++...
T Consensus 85 E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 156 (337)
T 1o6l_A 85 EYANGGELFFHLSRE-----RVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 156 (337)
T ss_dssp ECCTTCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred eCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCCHHHEEECCCCCEEEeeccchhhcc
Confidence 999999999988653 247899999999999999999997 899999999999999999999999999998643
Q ss_pred CCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHHHh
Q 002255 748 DNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKAI 827 (947)
Q Consensus 748 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 827 (947)
.... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....+.
T Consensus 157 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~----------------~~~~i~ 218 (337)
T 1o6l_A 157 SDGA--TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER----------------LFELIL 218 (337)
T ss_dssp CTTC--CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH----------------HHHHHH
T ss_pred cCCC--cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHH----------------HHHHHH
Confidence 3222 2334689999999999999999999999999999999999999997644221 112222
Q ss_pred hccCCCChhcHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q 002255 828 DRTIDLDEETLASISTVADLAGHCCAREPYQRP-----DMGHVVN 867 (947)
Q Consensus 828 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 867 (947)
......+. ....++.+++.+||+.||++|| ++.|+++
T Consensus 219 ~~~~~~p~---~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 219 MEEIRFPR---TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp HCCCCCCT---TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred cCCCCCCC---CCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 22232222 2235678999999999999999 8888876
No 54
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=2.8e-40 Score=359.92 Aligned_cols=275 Identities=16% Similarity=0.234 Sum_probs=220.0
Q ss_pred hcCCCcCceecccCceEEEEEEE-cCCcEEEEEEecccccChHHHHHHHHHHHHHHcC-CCCCcceEEEEEEeCCeeEEE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGEL-HDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKV-RHRHLVGLLGYCLDGNERLLV 666 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV 666 (947)
.++|++.+.||+|+||.||+|.. .+|+.||||++.... ..+.+.+|+.+++++ +|+|++++++++.++...++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 84 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS----DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLV 84 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT----TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC----ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEE
Confidence 46799999999999999999986 478999999986542 224578899999999 799999999999999999999
Q ss_pred EEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCc-----EEEeecC
Q 002255 667 YEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR-----AKVADFG 741 (947)
Q Consensus 667 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~-----~kl~DfG 741 (947)
|||+ +++|.+++.... ..+++.++..++.||+.||+|||+ ++|+||||||+||+++.++. +||+|||
T Consensus 85 ~e~~-~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg 156 (298)
T 1csn_A 85 IDLL-GPSLEDLLDLCG----RKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFG 156 (298)
T ss_dssp EECC-CCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEECCCT
T ss_pred EEec-CCCHHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEeccCCCCCCCeEEEEECc
Confidence 9999 999999996532 348999999999999999999996 89999999999999987776 9999999
Q ss_pred cceecCCCCCc-----ceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHh
Q 002255 742 LVRLAPDNGKH-----SIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRM 816 (947)
Q Consensus 742 la~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~ 816 (947)
+++........ .......||+.|+|||++.+..++.++|||||||++|||++|+.||..............+...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 236 (298)
T 1csn_A 157 MVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEK 236 (298)
T ss_dssp TCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHH
T ss_pred cccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhh
Confidence 99876543221 1234567999999999999989999999999999999999999999876544333222222111
Q ss_pred hcChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhCCCCCCCCCc
Q 002255 817 HINKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAELWKPAEPDSDDI 886 (947)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~~~~~~~~~~~~ 886 (947)
.. ...... ........+.+++.+|++.||++||++.+|++.|+++.+..........||
T Consensus 237 ~~-~~~~~~----------~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~~~~~~~dw 295 (298)
T 1csn_A 237 KQ-STPLRE----------LCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTTEDENFDW 295 (298)
T ss_dssp HH-HSCHHH----------HTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCSCSCCGG
T ss_pred cc-CccHHH----------HHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCCCCCCcccc
Confidence 10 000000 011223568899999999999999999999999999988766655555554
No 55
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=4.4e-40 Score=357.18 Aligned_cols=263 Identities=21% Similarity=0.375 Sum_probs=207.9
Q ss_pred hcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccc-cChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAV-VSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLV 666 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 666 (947)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... ......+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 478999999999999999999865 68999999986543 2445567899999999999999999999999999999999
Q ss_pred EEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceec
Q 002255 667 YEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 746 (947)
Q Consensus 667 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~ 746 (947)
|||+++++|.+++... ..+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 90 ~e~~~g~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 161 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESH-----GPLSVDTAINFTNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKAL 161 (294)
T ss_dssp EECCCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCSSSTTC
T ss_pred EeCCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEEeCCCcccc
Confidence 9999999999998653 248899999999999999999997 89999999999999999999999999999866
Q ss_pred CCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHHH
Q 002255 747 PDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKA 826 (947)
Q Consensus 747 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 826 (947)
..... .......||+.|+|||++.+..++.++||||||+++|||++|+.||......... ..............
T Consensus 162 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~-----~~~~~~~~~~~~~~ 235 (294)
T 4eqm_A 162 SETSL-TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIA-----IKHIQDSVPNVTTD 235 (294)
T ss_dssp --------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHH-----HHHHSSCCCCHHHH
T ss_pred ccccc-cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHH-----HHHhhccCCCcchh
Confidence 44221 2233457999999999999989999999999999999999999999765432110 00000000001000
Q ss_pred hhccCCCChhcHHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHHhhhh
Q 002255 827 IDRTIDLDEETLASISTVADLAGHCCAREPYQRP-DMGHVVNVLSSLAE 874 (947)
Q Consensus 827 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~l~~ 874 (947)
+ ....+..+.+++.+|++.||++|| +++++.+.|+.+..
T Consensus 236 ~---------~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~ 275 (294)
T 4eqm_A 236 V---------RKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLH 275 (294)
T ss_dssp S---------CTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSS
T ss_pred c---------ccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHh
Confidence 1 112235688999999999999999 89999999987654
No 56
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.1e-40 Score=367.60 Aligned_cols=266 Identities=27% Similarity=0.446 Sum_probs=198.4
Q ss_pred HhcCCCcCceecccCceEEEEEEEcC-C---cEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCee
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGELHD-G---TKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNER 663 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-g---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 663 (947)
..++|++.+.||+|+||.||+|.... + ..||||+++.........+++.+|++++++++||||+++++++......
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 34689999999999999999997653 3 2799999987655566678899999999999999999999999877655
Q ss_pred ------EEEEEecCCCchhhhhhccccc-CCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEE
Q 002255 664 ------LLVYEYMPQGTLSRHLFNRKEE-GLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAK 736 (947)
Q Consensus 664 ------~lV~e~~~~gsL~~~l~~~~~~-~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~k 736 (947)
++||||+++|+|.+++...... ....+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+|
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~Dikp~NIli~~~~~~k 177 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSS---RNFIHRDLAARNCMLAEDMTVC 177 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEE
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHc---CCcccCCCCcceEEEcCCCCEE
Confidence 9999999999999998654322 12258999999999999999999997 7999999999999999999999
Q ss_pred EeecCcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCCccCccchhhHHHHHHH
Q 002255 737 VADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDETQSEDSVHLVTWFRR 815 (947)
Q Consensus 737 l~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~l~~~~~~ 815 (947)
|+|||+++...............+++.|+|||.+.+..++.++|||||||++|||++ |+.||......+.
T Consensus 178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~--------- 248 (323)
T 3qup_A 178 VADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEI--------- 248 (323)
T ss_dssp ECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH---------
T ss_pred EeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHH---------
Confidence 999999987655433333344567889999999999999999999999999999999 8999976543321
Q ss_pred hhcChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 002255 816 MHINKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAE 874 (947)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~ 874 (947)
...+...... .........+.+++.+||+.||++||++.++++.|+++..
T Consensus 249 -------~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~ 298 (323)
T 3qup_A 249 -------YNYLIGGNRL--KQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILG 298 (323)
T ss_dssp -------HHHHHTTCCC--CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -------HHHHhcCCCC--CCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 1111111110 1111233568899999999999999999999999999874
No 57
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.1e-40 Score=367.80 Aligned_cols=258 Identities=28% Similarity=0.443 Sum_probs=203.4
Q ss_pred cCCCcCceecccCceEEEEEEEc-CCc----EEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeE
Q 002255 590 NNFSEENVLGRGGFGTVYKGELH-DGT----KIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERL 664 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~----~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 664 (947)
++|+..++||+|+||.||+|++. +++ +||+|.+.... .....+++.+|+.++++++||||+++++++.++. .+
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~ 92 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC--------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc-CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence 67889999999999999999864 344 46888876432 3345678999999999999999999999998755 78
Q ss_pred EEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcce
Q 002255 665 LVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 744 (947)
Q Consensus 665 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~ 744 (947)
+||||+++|+|.+++.... ..+++..++.++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 93 ~v~e~~~~g~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 165 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEEECCTTCBHHHHHHHST----TSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTHHH
T ss_pred EEEEecCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCChheEEECCCCCEEEccCccee
Confidence 9999999999999996643 348999999999999999999997 799999999999999999999999999998
Q ss_pred ecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhcChhhH
Q 002255 745 LAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDETQSEDSVHLVTWFRRMHINKDTF 823 (947)
Q Consensus 745 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 823 (947)
...............||+.|+|||++.+..++.++|||||||++|||++ |+.||......+ +
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-----------------~ 228 (327)
T 3poz_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE-----------------I 228 (327)
T ss_dssp HHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG-----------------H
T ss_pred EccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH-----------------H
Confidence 7755444333444567889999999999999999999999999999999 999997654322 1
Q ss_pred HHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 002255 824 RKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAE 874 (947)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~ 874 (947)
...+..... ..........+.+++.+||+.||++||++.|+++.|+.+..
T Consensus 229 ~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 229 SSILEKGER-LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp HHHHHTTCC-CCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred HHHHHcCCC-CCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 122222111 11112234568899999999999999999999999998764
No 58
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=2.2e-40 Score=357.78 Aligned_cols=257 Identities=24% Similarity=0.411 Sum_probs=209.0
Q ss_pred hcCCCcCceecccCceEEEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEEE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVYE 668 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 668 (947)
.++|++.+.||+|+||.||+|.+.++..||+|+++..... .+++.+|++++++++||||+++++++.+++..++|||
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 99 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS---EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE 99 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBC---HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCC---HHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEe
Confidence 4678899999999999999999998889999999865433 3578899999999999999999999999999999999
Q ss_pred ecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceecCC
Q 002255 669 YMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPD 748 (947)
Q Consensus 669 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~ 748 (947)
|+++++|.+++.... ..+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 100 ~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 172 (283)
T 3gen_A 100 YMANGCLLNYLREMR----HRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 172 (283)
T ss_dssp CCTTCBHHHHHHCGG----GCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCC
T ss_pred ccCCCcHHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCccceEEEcCCCCEEEccccccccccc
Confidence 999999999996533 248899999999999999999997 8999999999999999999999999999986644
Q ss_pred CCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhcChhhHHHHh
Q 002255 749 NGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDETQSEDSVHLVTWFRRMHINKDTFRKAI 827 (947)
Q Consensus 749 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 827 (947)
.. ........+|+.|+|||++.+..++.++||||||+++|||++ |+.||......+. ...+.
T Consensus 173 ~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~----------------~~~~~ 235 (283)
T 3gen_A 173 DE-YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET----------------AEHIA 235 (283)
T ss_dssp HH-HHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH----------------HHHHH
T ss_pred cc-cccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHH----------------HHHHh
Confidence 21 112233457788999999998899999999999999999998 9999976543211 11111
Q ss_pred hccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 002255 828 DRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAE 874 (947)
Q Consensus 828 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~ 874 (947)
.. .. ..........+.+++.+||+.||++||++.++++.|+++.+
T Consensus 236 ~~-~~-~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~ 280 (283)
T 3gen_A 236 QG-LR-LYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 280 (283)
T ss_dssp TT-CC-CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cc-cC-CCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhh
Confidence 11 11 01111223467899999999999999999999999998864
No 59
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=5.5e-40 Score=359.37 Aligned_cols=270 Identities=25% Similarity=0.355 Sum_probs=205.1
Q ss_pred HhcCCCcCceecccCceEEEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEE
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVY 667 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 667 (947)
+.++|++.++||+|+||.||+|+..+|+.||+|++..........+.+.+|++++++++||||+++++++.+++..++||
T Consensus 19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 98 (311)
T 3niz_A 19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF 98 (311)
T ss_dssp SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence 45789999999999999999999988999999999766544555678899999999999999999999999999999999
Q ss_pred EecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceecC
Q 002255 668 EYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 747 (947)
Q Consensus 668 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~ 747 (947)
||++ |+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 99 e~~~-~~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 170 (311)
T 3niz_A 99 EFME-KDLKKVLDENK----TGLQDSQIKIYLYQLLRGVAHCHQ---HRILHRDLKPQNLLINSDGALKLADFGLARAFG 170 (311)
T ss_dssp ECCS-EEHHHHHHTCT----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEETT
T ss_pred cCCC-CCHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCchHhEEECCCCCEEEccCcCceecC
Confidence 9997 58888775432 348899999999999999999997 899999999999999999999999999998765
Q ss_pred CCCCcceeecccccccccCcccccc-CCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcCh-----h
Q 002255 748 DNGKHSIETRLAGTFGYLAPEYAVT-GRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINK-----D 821 (947)
Q Consensus 748 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~-----~ 821 (947)
.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+....+.......... .
T Consensus 171 ~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 248 (311)
T 3niz_A 171 IPVR--SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQ 248 (311)
T ss_dssp SCCC-----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGT
T ss_pred CCcc--cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhh
Confidence 4322 2234578999999999876 568999999999999999999999998765544322211111000000 0
Q ss_pred hHHHHhhccCCC-Chhc-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 822 TFRKAIDRTIDL-DEET-----LASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 822 ~~~~~~~~~~~~-~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
......+..... .... .....++.+|+.+||+.||++|||++|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 249 ELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp TSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred ccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 000001111000 0000 112246789999999999999999999976
No 60
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=2.9e-40 Score=362.53 Aligned_cols=266 Identities=26% Similarity=0.430 Sum_probs=217.2
Q ss_pred hcCCCcCceecccCceEEEEEEE------cCCcEEEEEEecccccChHHHHHHHHHHHHHHcC-CCCCcceEEEEEEeCC
Q 002255 589 TNNFSEENVLGRGGFGTVYKGEL------HDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKV-RHRHLVGLLGYCLDGN 661 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 661 (947)
.++|++.+.||+|+||.||+|++ .+++.||||+++... .....+.+.+|+++++++ +||||+++++++.+++
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 100 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA-HLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 100 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch-hHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence 46789999999999999999985 246789999997553 344567899999999999 9999999999999999
Q ss_pred eeEEEEEecCCCchhhhhhccccc-------------CCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEE
Q 002255 662 ERLLVYEYMPQGTLSRHLFNRKEE-------------GLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNIL 728 (947)
Q Consensus 662 ~~~lV~e~~~~gsL~~~l~~~~~~-------------~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nil 728 (947)
..++||||+++|+|.+++...... ....+++.+++.++.||+.||+|||+ ++|+||||||+||+
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil 177 (313)
T 1t46_A 101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNIL 177 (313)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEE
T ss_pred CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEE
Confidence 999999999999999999764321 12358999999999999999999997 89999999999999
Q ss_pred EcCCCcEEEeecCcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCCccCccchh
Q 002255 729 LGDDMRAKVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDETQSEDSV 807 (947)
Q Consensus 729 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~ 807 (947)
++.++.+||+|||+++...............||+.|+|||++.+..++.++||||||+++|||++ |+.||........
T Consensus 178 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~- 256 (313)
T 1t46_A 178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK- 256 (313)
T ss_dssp EETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH-
T ss_pred EcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhH-
Confidence 99999999999999987765444333445568889999999998999999999999999999999 9999976543221
Q ss_pred hHHHHHHHhhcChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 002255 808 HLVTWFRRMHINKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAEL 875 (947)
Q Consensus 808 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~ 875 (947)
....+..... ..........+.+++.+|++.||++||++.|+++.|+++...
T Consensus 257 ---------------~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 308 (313)
T 1t46_A 257 ---------------FYKMIKEGFR-MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (313)
T ss_dssp ---------------HHHHHHHTCC-CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---------------HHHHhccCCC-CCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 1111111111 011112335688999999999999999999999999988753
No 61
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=8.3e-41 Score=363.44 Aligned_cols=273 Identities=24% Similarity=0.432 Sum_probs=209.1
Q ss_pred hcCCCcCceecccCceEEEEEEEc-----CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEe--CC
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELH-----DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLD--GN 661 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~-----~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~ 661 (947)
.++|++.+.||+|+||.||+|++. +++.||||++... .....+.+.+|++++++++||||+++++++.. ..
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 86 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 86 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHT
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 467899999999999999999852 5889999999754 45666789999999999999999999999865 35
Q ss_pred eeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecC
Q 002255 662 ERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 741 (947)
Q Consensus 662 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG 741 (947)
..++||||+++|+|.+++.... ..+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 87 ~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg 159 (295)
T 3ugc_A 87 NLKLIMEYLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFG 159 (295)
T ss_dssp SCEEEEECCTTCBHHHHHHHCG----GGCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCC
T ss_pred ceEEEEEeCCCCCHHHHHHhcc----cccCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHhhEEEcCCCeEEEccCc
Confidence 6899999999999999996643 248899999999999999999997 899999999999999999999999999
Q ss_pred cceecCCCCCc-ceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcCh
Q 002255 742 LVRLAPDNGKH-SIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINK 820 (947)
Q Consensus 742 la~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~ 820 (947)
+++........ .......|+..|+|||++.+..++.++||||||+++|||++|..|+...... ............
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~----~~~~~~~~~~~~ 235 (295)
T 3ugc_A 160 LTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE----FMRMIGNDKQGQ 235 (295)
T ss_dssp SCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH----HHHHHCTTCCTH
T ss_pred ccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHH----HHhhhcCccccc
Confidence 99876543221 2233446788899999999999999999999999999999999998653211 000000000000
Q ss_pred ---hhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 002255 821 ---DTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAEL 875 (947)
Q Consensus 821 ---~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~ 875 (947)
....+.+..... .+........+.+++.+||+.||++||++.|+++.|+.+.+.
T Consensus 236 ~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 236 MIVFHLIELLKNNGR-LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp HHHHHHHHHHHTTCC-CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHhccCc-CCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 011112221111 111223345688999999999999999999999999998753
No 62
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=3.4e-40 Score=369.66 Aligned_cols=284 Identities=16% Similarity=0.219 Sum_probs=215.9
Q ss_pred HhcCCCcCceecccCceEEEEEEEcC------CcEEEEEEecccccChH---------HHHHHHHHHHHHHcCCCCCcce
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGELHD------GTKIAVKRMESAVVSEK---------GFAEFKSEIAVLTKVRHRHLVG 652 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~~~------g~~vavK~~~~~~~~~~---------~~~~~~~E~~~l~~l~h~niv~ 652 (947)
..++|++.+.||+|+||.||+|.++. ++.||||++........ ....+..|+..++.++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 34689999999999999999998764 47899999875421100 0123445666777888999999
Q ss_pred EEEEEEeC----CeeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEE
Q 002255 653 LLGYCLDG----NERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNIL 728 (947)
Q Consensus 653 l~~~~~~~----~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nil 728 (947)
+++++... ...++||||+ +++|.+++.... ..+++.+++.++.||+.||+|||+ .+|+||||||+|||
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~----~~l~~~~~~~i~~qi~~~l~~lH~---~~iiHrDlkp~Nil 184 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA----KRFSRKTVLQLSLRILDILEYIHE---HEYVHGDIKASNLL 184 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEE
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEEecCCHHHEE
Confidence 99998764 4579999999 999999986532 358999999999999999999997 79999999999999
Q ss_pred Ec--CCCcEEEeecCcceecCCCCCcc-----eeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCcc
Q 002255 729 LG--DDMRAKVADFGLVRLAPDNGKHS-----IETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDET 801 (947)
Q Consensus 729 l~--~~~~~kl~DfGla~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~ 801 (947)
++ .++.+||+|||+++.+....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+.
T Consensus 185 l~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~ 264 (364)
T 3op5_A 185 LNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDN 264 (364)
T ss_dssp EESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred EecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence 99 88999999999998765432211 113346999999999999989999999999999999999999999864
Q ss_pred CccchhhHHHHHHHhhcChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhCCCCC
Q 002255 802 QSEDSVHLVTWFRRMHINKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAELWKPAEP 881 (947)
Q Consensus 802 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~~~~~~~ 881 (947)
...... ........ ...+...++..+... ..+..+.+++.+|++.+|++||++.+|++.|+.+.+.......
T Consensus 265 ~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~----~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~~~~ 336 (364)
T 3op5_A 265 LKDPKY--VRDSKIRY--RENIASLMDKCFPAA----NAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKDD 336 (364)
T ss_dssp TTCHHH--HHHHHHHH--HHCHHHHHHHHSCTT----CCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCCC
T ss_pred ccCHHH--HHHHHHHh--hhhHHHHHHHhcccc----cCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCcC
Confidence 433221 11111110 122334444333211 1234688999999999999999999999999999887776666
Q ss_pred CCCCcc
Q 002255 882 DSDDIY 887 (947)
Q Consensus 882 ~~~~~~ 887 (947)
...+|.
T Consensus 337 ~~~dw~ 342 (364)
T 3op5_A 337 GKLDLS 342 (364)
T ss_dssp CCCCC-
T ss_pred CccceE
Confidence 666653
No 63
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=6.3e-40 Score=363.10 Aligned_cols=267 Identities=27% Similarity=0.449 Sum_probs=216.0
Q ss_pred hcCCCcCceecccCceEEEEEEEc--------CCcEEEEEEecccccChHHHHHHHHHHHHHHcC-CCCCcceEEEEEEe
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELH--------DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKV-RHRHLVGLLGYCLD 659 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 659 (947)
.++|++.+.||+|+||.||+|... ++..||||++.... .....+.+.+|+++++++ +||||+++++++.+
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC-cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 468899999999999999999863 46789999997543 455677899999999999 89999999999999
Q ss_pred CCeeEEEEEecCCCchhhhhhcccccC-----------CCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEE
Q 002255 660 GNERLLVYEYMPQGTLSRHLFNRKEEG-----------LKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNIL 728 (947)
Q Consensus 660 ~~~~~lV~e~~~~gsL~~~l~~~~~~~-----------~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nil 728 (947)
++..++||||+++|+|.+++......+ ...+++.+++.++.||+.||+|||+ .+|+||||||+||+
T Consensus 113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIl 189 (334)
T 2pvf_A 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVL 189 (334)
T ss_dssp SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEE
T ss_pred CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCccceEE
Confidence 999999999999999999997643211 1348899999999999999999997 89999999999999
Q ss_pred EcCCCcEEEeecCcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCCccCccchh
Q 002255 729 LGDDMRAKVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDETQSEDSV 807 (947)
Q Consensus 729 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~ 807 (947)
++.++.+||+|||+++...............+|+.|+|||++.+..++.++||||||+++|||++ |+.||......+.
T Consensus 190 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~- 268 (334)
T 2pvf_A 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL- 268 (334)
T ss_dssp ECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH-
T ss_pred EcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHH-
Confidence 99999999999999987765443333344567889999999988899999999999999999999 9999976542211
Q ss_pred hHHHHHHHhhcChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhC
Q 002255 808 HLVTWFRRMHINKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAELWK 877 (947)
Q Consensus 808 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~~~ 877 (947)
. ..+..... ..........+.+++.+||+.||++||++.|+++.|+++.....
T Consensus 269 --~--------------~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~ 321 (334)
T 2pvf_A 269 --F--------------KLLKEGHR-MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321 (334)
T ss_dssp --H--------------HHHHHTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred --H--------------HHHhcCCC-CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccc
Confidence 1 11111100 01111233568899999999999999999999999999876543
No 64
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.8e-40 Score=368.64 Aligned_cols=254 Identities=22% Similarity=0.358 Sum_probs=201.2
Q ss_pred hcCCCcCceecccCceEEEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCC--CCcceEEEEEEeCCeeEEE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRH--RHLVGLLGYCLDGNERLLV 666 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lV 666 (947)
.++|++.+.||+|+||.||+|...+++.||||++..........+.+.+|+.++++++| +||+++++++.++...++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 35689999999999999999998889999999998766667777889999999999976 9999999999999999999
Q ss_pred EEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceec
Q 002255 667 YEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 746 (947)
Q Consensus 667 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~ 746 (947)
|| +.+++|.+++... ..+++.++..++.||+.||+|||+ .+|+||||||+|||++ ++.+||+|||+++..
T Consensus 88 ~e-~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~al~~lH~---~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~ 157 (343)
T 3dbq_A 88 ME-CGNIDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQM 157 (343)
T ss_dssp EC-CCSEEHHHHHHHS-----CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC
T ss_pred Ee-CCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEE-CCcEEEeeccccccc
Confidence 99 5688999999653 348899999999999999999997 7999999999999997 678999999999877
Q ss_pred CCCCCcceeecccccccccCcccccc-----------CCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHH
Q 002255 747 PDNGKHSIETRLAGTFGYLAPEYAVT-----------GRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRR 815 (947)
Q Consensus 747 ~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~ 815 (947)
.............||+.|+|||++.+ ..++.++|||||||++|||++|+.||......
T Consensus 158 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~----------- 226 (343)
T 3dbq_A 158 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ----------- 226 (343)
T ss_dssp ------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSH-----------
T ss_pred CcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhH-----------
Confidence 55433333445689999999999864 67899999999999999999999999754321
Q ss_pred hhcChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 002255 816 MHINKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNV 868 (947)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 868 (947)
...+...++...... .+......+.+++.+||+.||++||++.|+++.
T Consensus 227 ----~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 227 ----ISKLHAIIDPNHEIE-FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp ----HHHHHHHHCTTSCCC-CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ----HHHHHHHhcCCcccC-CcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 011222232222111 111112457899999999999999999999874
No 65
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=2.5e-40 Score=367.26 Aligned_cols=250 Identities=24% Similarity=0.392 Sum_probs=203.3
Q ss_pred hcCCCcCceecccCceEEEEEEEc-CCcEEEEEEeccccc-ChHHHHHHHHHHHHHHcC-CCCCcceEEEEEEeCCeeEE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVV-SEKGFAEFKSEIAVLTKV-RHRHLVGLLGYCLDGNERLL 665 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 665 (947)
.++|++.++||+|+||.||+|+.+ +|+.||||+++.... .....+.+.+|+++++.+ +||||+++++++.+.+..|+
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 478999999999999999999876 589999999976432 233456788999999998 69999999999999999999
Q ss_pred EEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCccee
Q 002255 666 VYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 745 (947)
Q Consensus 666 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~ 745 (947)
||||+++|+|.+++... ..+++.++..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 102 v~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NILl~~~g~ikL~DFG~a~~ 173 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKS-----RRFDEARARFYAAEIISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKE 173 (353)
T ss_dssp EEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCCHHHEEECCCCCEEEccccceee
Confidence 99999999999998653 248899999999999999999997 8999999999999999999999999999986
Q ss_pred cCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHH
Q 002255 746 APDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRK 825 (947)
Q Consensus 746 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 825 (947)
..... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||...... +.+..
T Consensus 174 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~----------------~~~~~ 235 (353)
T 3txo_A 174 GICNG--VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED----------------DLFEA 235 (353)
T ss_dssp SCC-----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH----------------HHHHH
T ss_pred cccCC--ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH----------------HHHHH
Confidence 43322 2234468999999999999889999999999999999999999999765432 12233
Q ss_pred HhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCH------HHHHH
Q 002255 826 AIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDM------GHVVN 867 (947)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~ 867 (947)
+.......+.. ....+.+++.+||+.||++||++ .|+++
T Consensus 236 i~~~~~~~p~~---~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 236 ILNDEVVYPTW---LHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp HHHCCCCCCTT---SCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred HHcCCCCCCCC---CCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 33333332222 23457899999999999999998 66654
No 66
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=7e-40 Score=357.28 Aligned_cols=261 Identities=23% Similarity=0.395 Sum_probs=203.1
Q ss_pred HhcCCCcCceecccCceEEEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHHHHc--CCCCCcceEEEEEEeC----C
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTK--VRHRHLVGLLGYCLDG----N 661 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~----~ 661 (947)
+.++|++.+.||+|+||.||+|++ +|+.||||++... ....+..|.+++.. ++||||+++++++... .
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~ 79 (301)
T 3q4u_A 6 VARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR-----DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSST 79 (301)
T ss_dssp CGGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG-----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEE
T ss_pred ccCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc-----cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCc
Confidence 457899999999999999999988 5899999998643 23456667777776 7999999999997642 4
Q ss_pred eeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhcc-----CCCeeecCCCCCcEEEcCCCcEE
Q 002255 662 ERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLA-----HQSFIHRDLKPSNILLGDDMRAK 736 (947)
Q Consensus 662 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~-----~~~ivHrDlkp~Nill~~~~~~k 736 (947)
..++||||+++|+|.+++.. ..+++..++.++.||+.||+|||+.. +++|+||||||+|||++.++.+|
T Consensus 80 ~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~k 153 (301)
T 3q4u_A 80 QLWLITHYHEMGSLYDYLQL------TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCC 153 (301)
T ss_dssp EEEEEECCCTTCBHHHHHTT------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEE
T ss_pred eeEEehhhccCCCHHHHHhh------cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEE
Confidence 57999999999999999943 34899999999999999999999211 28999999999999999999999
Q ss_pred EeecCcceecCCCCCcc--eeecccccccccCccccccC------CcCcccccccHHHHHHHHHhC----------CCCC
Q 002255 737 VADFGLVRLAPDNGKHS--IETRLAGTFGYLAPEYAVTG------RVTTKVDVFSFGVILMELITG----------RKAL 798 (947)
Q Consensus 737 l~DfGla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlGvil~elltg----------~~p~ 798 (947)
|+|||+++......... ......||+.|+|||++.+. .++.++|||||||++|||++| +.||
T Consensus 154 l~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf 233 (301)
T 3q4u_A 154 IADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPF 233 (301)
T ss_dssp ECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred EeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccc
Confidence 99999998665433221 12234799999999999776 556799999999999999999 7888
Q ss_pred CccCccchhhHHHHHHHhhcChhhHHHHhhc---cCCCC--hhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 002255 799 DETQSEDSVHLVTWFRRMHINKDTFRKAIDR---TIDLD--EETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSL 872 (947)
Q Consensus 799 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l 872 (947)
......+... ......+.. ..... .........+.+++.+||+.||++|||+.||++.|+++
T Consensus 234 ~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 234 YDVVPNDPSF------------EDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp TTTSCSSCCH------------HHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred cccCCCCcch------------hhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 6544322110 111111111 11111 12234556789999999999999999999999999875
No 67
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=2e-40 Score=382.33 Aligned_cols=258 Identities=27% Similarity=0.470 Sum_probs=210.9
Q ss_pred HhcCCCcCceecccCceEEEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEE
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVY 667 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 667 (947)
..++|++.+.||+|+||.||+|.++++..||||+++... ...++|.+|++++++++|||||++++++. ++..++||
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~ 261 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS---MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIIT 261 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS---BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC---ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEE
Confidence 356788999999999999999999888999999997643 23578999999999999999999999986 66789999
Q ss_pred EecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceecC
Q 002255 668 EYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 747 (947)
Q Consensus 668 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~ 747 (947)
||+++|+|.+++..... ..+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++...
T Consensus 262 e~~~~g~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~ 335 (454)
T 1qcf_A 262 EFMAKGSLLDFLKSDEG---SKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIE 335 (454)
T ss_dssp CCCTTCBHHHHHHSHHH---HTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTCCEEECSTTGGGGBC
T ss_pred eecCCCcHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEEECCCCcEEEeeCCCceEcC
Confidence 99999999999975432 237888999999999999999997 799999999999999999999999999998764
Q ss_pred CCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhcChhhHHHH
Q 002255 748 DNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDETQSEDSVHLVTWFRRMHINKDTFRKA 826 (947)
Q Consensus 748 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 826 (947)
... ........+|..|+|||++....++.++|||||||++|||++ |+.||.+....+.. ..
T Consensus 336 ~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~-----------------~~ 397 (454)
T 1qcf_A 336 DNE-YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI-----------------RA 397 (454)
T ss_dssp CHH-HHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH-----------------HH
T ss_pred CCc-eeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHH-----------------HH
Confidence 321 111233456789999999998899999999999999999999 99999765432211 11
Q ss_pred hhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 002255 827 IDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAE 874 (947)
Q Consensus 827 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~ 874 (947)
+...... +.+...+..+.+++.+||+.||++||++.+|++.|+.+..
T Consensus 398 i~~~~~~-~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~ 444 (454)
T 1qcf_A 398 LERGYRM-PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT 444 (454)
T ss_dssp HHHTCCC-CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred HHcCCCC-CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence 1111111 1112234568899999999999999999999999998754
No 68
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=3.5e-40 Score=357.28 Aligned_cols=263 Identities=29% Similarity=0.524 Sum_probs=200.3
Q ss_pred hcCCCcCceecccCceEEEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEEE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVYE 668 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 668 (947)
.++|++.++||+|+||.||+|+.. ..||||+++.........+.+.+|++++++++||||+++++++ .....++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 468999999999999999999764 4699999987766677778899999999999999999999965 5567899999
Q ss_pred ecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceecCC
Q 002255 669 YMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPD 748 (947)
Q Consensus 669 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~ 748 (947)
|+++++|.+++.... ..+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 100 ~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 172 (289)
T 3og7_A 100 WCEGSSLYHHLHASE----TKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSR 172 (289)
T ss_dssp CCCEEEHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEEEECCCC-------
T ss_pred ecCCCcHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHh---CCcccccCccceEEECCCCCEEEccceecccccc
Confidence 999999999985432 458999999999999999999997 8999999999999999999999999999986544
Q ss_pred CCCcceeecccccccccCccccc---cCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHH
Q 002255 749 NGKHSIETRLAGTFGYLAPEYAV---TGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRK 825 (947)
Q Consensus 749 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 825 (947)
...........||+.|+|||++. ...++.++||||||+++|||++|+.||......+. ....+.....
T Consensus 173 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~--~~~~~~~~~~------- 243 (289)
T 3og7_A 173 WSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ--IIEMVGRGSL------- 243 (289)
T ss_dssp -----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHH--HHHHHHHTSC-------
T ss_pred ccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHH--HHHHhccccc-------
Confidence 32223334467999999999986 56788899999999999999999999976543221 1111111000
Q ss_pred HhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 002255 826 AIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAE 874 (947)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~ 874 (947)
.. ............+.+++.+||+.||++||++.++++.|+++.+
T Consensus 244 --~~--~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 244 --SP--DLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp --CC--CTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred --Cc--chhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 00 0011112234568899999999999999999999999998753
No 69
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1e-39 Score=359.62 Aligned_cols=253 Identities=22% Similarity=0.357 Sum_probs=207.4
Q ss_pred HhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccCh----HHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCe
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSE----KGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNE 662 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 662 (947)
+.++|.+.+.||+|+||.||+|..+ +|+.||+|++....... ...+.+.+|+.++++++||||+++++++.++..
T Consensus 9 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 88 (326)
T 2y0a_A 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD 88 (326)
T ss_dssp HHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred cccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence 4567999999999999999999876 68999999997653221 135788999999999999999999999999999
Q ss_pred eEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCC----cEEEe
Q 002255 663 RLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM----RAKVA 738 (947)
Q Consensus 663 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~----~~kl~ 738 (947)
.++||||+++|+|.+++... ..+++.++..++.||+.||+|||+ .+|+||||||+||+++.++ .+||+
T Consensus 89 ~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~ 160 (326)
T 2y0a_A 89 VILILELVAGGELFDFLAEK-----ESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKII 160 (326)
T ss_dssp EEEEEECCCSCBHHHHHTTS-----SCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCSSSSSCCEEEC
T ss_pred EEEEEEcCCCCCHHHHHHhc-----CCcCHHHHHHHHHHHHHHHHHHHH---CCeEcCCCCHHHEEEecCCCCCCCEEEE
Confidence 99999999999999998542 348999999999999999999997 8999999999999999887 89999
Q ss_pred ecCcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhc
Q 002255 739 DFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHI 818 (947)
Q Consensus 739 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~ 818 (947)
|||+++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+.
T Consensus 161 Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~------------ 225 (326)
T 2y0a_A 161 DFGLAHKIDFGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET------------ 225 (326)
T ss_dssp CCTTCEECCTTSC---CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH------------
T ss_pred ECCCCeECCCCCc---cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH------------
Confidence 9999987754322 2345799999999999988999999999999999999999999976542211
Q ss_pred ChhhHHHHhhccCCCChhc-HHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 819 NKDTFRKAIDRTIDLDEET-LASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
+..+........... ......+.+++.+||+.||++|||+.|+++
T Consensus 226 ----~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 226 ----LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp ----HHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ----HHHHHhcCCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 111111111111111 122345789999999999999999999976
No 70
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=8.9e-40 Score=357.84 Aligned_cols=248 Identities=26% Similarity=0.306 Sum_probs=198.7
Q ss_pred HhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcC-CCCCcceEEEEEEeCCeeEE
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKV-RHRHLVGLLGYCLDGNERLL 665 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 665 (947)
..++|++.++||+|+||+||+|... +|+.||||++...........++..|+..+.++ +||||+++++++.+++..++
T Consensus 55 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~l 134 (311)
T 3p1a_A 55 FQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYL 134 (311)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEE
Confidence 3467999999999999999999886 799999999876655555566667777766666 89999999999999999999
Q ss_pred EEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCccee
Q 002255 666 VYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 745 (947)
Q Consensus 666 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~ 745 (947)
||||+ +++|.+++.... ..++|..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 135 v~e~~-~~~L~~~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~ 206 (311)
T 3p1a_A 135 QTELC-GPSLQQHCEAWG----ASLPEAQVWGYLRDTLLALAHLHS---QGLVHLDVKPANIFLGPRGRCKLGDFGLLVE 206 (311)
T ss_dssp EEECC-CCBHHHHHHHHC----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECGGGCEEECCCTTCEE
T ss_pred EEecc-CCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEccceeeee
Confidence 99999 779988886543 358999999999999999999997 7999999999999999999999999999987
Q ss_pred cCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHH
Q 002255 746 APDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRK 825 (947)
Q Consensus 746 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 825 (947)
..... ......||+.|+|||++.+ .++.++|||||||++|||++|..|+..... ...
T Consensus 207 ~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~-------------------~~~ 263 (311)
T 3p1a_A 207 LGTAG---AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG-------------------WQQ 263 (311)
T ss_dssp CC---------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH-------------------HHH
T ss_pred cccCC---CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH-------------------HHH
Confidence 65432 2334579999999998875 799999999999999999999776643211 111
Q ss_pred HhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 826 AIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
+...... ..........+.+++.+||+.||++||++.|+++
T Consensus 264 ~~~~~~~-~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 264 LRQGYLP-PEFTAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp HTTTCCC-HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HhccCCC-cccccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 1111110 1111122356889999999999999999999976
No 71
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.8e-40 Score=367.79 Aligned_cols=266 Identities=26% Similarity=0.443 Sum_probs=212.3
Q ss_pred HhcCCCcCceecccCceEEEEEEEc------CCcEEEEEEecccccChHHHHHHHHHHHHHHcC-CCCCcceEEEEEEeC
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGELH------DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKV-RHRHLVGLLGYCLDG 660 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 660 (947)
..++|++.+.||+|+||.||+|... ++..||||++.... .....+.+.+|+.+++++ +||||+++++++..+
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 121 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA-DSSEREALMSELKMMTQLGSHENIVNLLGACTLS 121 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc-CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeC
Confidence 3478899999999999999999862 45689999997542 334457899999999999 899999999999999
Q ss_pred CeeEEEEEecCCCchhhhhhccccc------------------CCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCC
Q 002255 661 NERLLVYEYMPQGTLSRHLFNRKEE------------------GLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDL 722 (947)
Q Consensus 661 ~~~~lV~e~~~~gsL~~~l~~~~~~------------------~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDl 722 (947)
+..++||||+++|+|.+++...... ....+++..++.++.||+.||+|||+ .+|+||||
T Consensus 122 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Di 198 (344)
T 1rjb_A 122 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDL 198 (344)
T ss_dssp SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH---TTEEETTC
T ss_pred CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCC
Confidence 9999999999999999999764321 11347899999999999999999997 89999999
Q ss_pred CCCcEEEcCCCcEEEeecCcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCCcc
Q 002255 723 KPSNILLGDDMRAKVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDET 801 (947)
Q Consensus 723 kp~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~~~ 801 (947)
||+||+++.++.+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||+| |+.||...
T Consensus 199 kp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 278 (344)
T 1rjb_A 199 AARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI 278 (344)
T ss_dssp SGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred ChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccC
Confidence 99999999999999999999987655443334445568899999999988899999999999999999998 99999765
Q ss_pred CccchhhHHHHHHHhhcChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 002255 802 QSEDSVHLVTWFRRMHINKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAE 874 (947)
Q Consensus 802 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~ 874 (947)
..... +...+...... .........+.+++.+||+.||++||++.|+++.|+.+..
T Consensus 279 ~~~~~----------------~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 334 (344)
T 1rjb_A 279 PVDAN----------------FYKLIQNGFKM-DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLA 334 (344)
T ss_dssp CCSHH----------------HHHHHHTTCCC-CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred CcHHH----------------HHHHHhcCCCC-CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence 43221 11222221111 1111234568899999999999999999999999998764
No 72
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1.1e-39 Score=360.99 Aligned_cols=254 Identities=26% Similarity=0.394 Sum_probs=202.5
Q ss_pred HhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCC-----
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGN----- 661 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 661 (947)
..++|++.+.||+|+||.||+|+.+ +|+.||||++.... .....+.+.+|++++++++|||||++++++.+..
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 82 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQ 82 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS-TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC-chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhh
Confidence 4567999999999999999999886 79999999997553 3445678999999999999999999999986543
Q ss_pred ----------------------------------------------------eeEEEEEecCCCchhhhhhcccccCCCc
Q 002255 662 ----------------------------------------------------ERLLVYEYMPQGTLSRHLFNRKEEGLKP 689 (947)
Q Consensus 662 ----------------------------------------------------~~~lV~e~~~~gsL~~~l~~~~~~~~~~ 689 (947)
..++||||+++|+|.+++...... ..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~--~~ 160 (332)
T 3qd2_B 83 EEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSL--ED 160 (332)
T ss_dssp HHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSG--GG
T ss_pred hhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCc--cc
Confidence 379999999999999999764432 34
Q ss_pred ccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceecCCCCCc----------ceeeccc
Q 002255 690 LEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPDNGKH----------SIETRLA 759 (947)
Q Consensus 690 ~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~----------~~~~~~~ 759 (947)
..+..++.++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++........ .......
T Consensus 161 ~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (332)
T 3qd2_B 161 REHGVCLHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQV 237 (332)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC
T ss_pred hhhHHHHHHHHHHHHHHHHHHh---CCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccC
Confidence 6777889999999999999997 89999999999999999999999999999877553211 1223457
Q ss_pred ccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHHHhhccCCCChhcHH
Q 002255 760 GTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKAIDRTIDLDEETLA 839 (947)
Q Consensus 760 gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 839 (947)
||+.|+|||++.+..++.++|||||||++|||++|..|+.... . ....... .........
T Consensus 238 gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~-----~-------------~~~~~~~--~~~~~~~~~ 297 (332)
T 3qd2_B 238 GTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV-----R-------------IITDVRN--LKFPLLFTQ 297 (332)
T ss_dssp -CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHH-----H-------------HHHHHHT--TCCCHHHHH
T ss_pred CCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHH-----H-------------HHHHhhc--cCCCccccc
Confidence 9999999999999899999999999999999999877643210 0 0111111 122233334
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 840 SISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 840 ~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
....+.+++.+||+.||++||++.|+++
T Consensus 298 ~~~~~~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 298 KYPQEHMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HCHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred CChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence 4466789999999999999999999986
No 73
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=6.2e-40 Score=353.84 Aligned_cols=259 Identities=25% Similarity=0.393 Sum_probs=199.6
Q ss_pred hcCCCcCceecccCceEEEEEEEcC----CcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELHD----GTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERL 664 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 664 (947)
.++|++.+.||+|+||.||+|.... +..||+|++.... .....+.+.+|+.++++++||||+++++++. ++..+
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 91 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 91 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT-SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccE
Confidence 4688999999999999999998743 4579999987542 4555678999999999999999999999984 56789
Q ss_pred EEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcce
Q 002255 665 LVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 744 (947)
Q Consensus 665 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~ 744 (947)
+||||+++++|.+++.... ..+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 92 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 164 (281)
T 1mp8_A 92 IIMELCTLGELRSFLQVRK----YSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSR 164 (281)
T ss_dssp EEEECCTTEEHHHHHHHTT----TTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC-----
T ss_pred EEEecCCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHEEECCCCCEEECcccccc
Confidence 9999999999999996532 348899999999999999999997 899999999999999999999999999998
Q ss_pred ecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhcChhhH
Q 002255 745 LAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDETQSEDSVHLVTWFRRMHINKDTF 823 (947)
Q Consensus 745 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 823 (947)
....... .......+|+.|+|||++....++.++||||||+++|||++ |+.||......+..
T Consensus 165 ~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~---------------- 227 (281)
T 1mp8_A 165 YMEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI---------------- 227 (281)
T ss_dssp ---------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH----------------
T ss_pred ccCcccc-cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHH----------------
Confidence 7654322 12233457889999999988899999999999999999997 99999765433211
Q ss_pred HHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 002255 824 RKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAEL 875 (947)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~ 875 (947)
..+..... ..........+.+++.+|++.||++||++.|+++.|+.+.+.
T Consensus 228 ~~i~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 277 (281)
T 1mp8_A 228 GRIENGER--LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 277 (281)
T ss_dssp HHHHTTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHcCCC--CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 11111110 011112335688999999999999999999999999998753
No 74
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=5.7e-40 Score=352.08 Aligned_cols=254 Identities=22% Similarity=0.339 Sum_probs=209.1
Q ss_pred cCCCcCceecccCceEEEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeC--CeeEEEE
Q 002255 590 NNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDG--NERLLVY 667 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lV~ 667 (947)
++|++.+.||+|+||.||+|+++ ++.||||++..........+.+.+|+.++++++||||+++++++.+. ...++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 67899999999999999999986 89999999987766677778899999999999999999999999877 7889999
Q ss_pred EecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCC--eeecCCCCCcEEEcCCCcEEEeecCccee
Q 002255 668 EYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQS--FIHRDLKPSNILLGDDMRAKVADFGLVRL 745 (947)
Q Consensus 668 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~--ivHrDlkp~Nill~~~~~~kl~DfGla~~ 745 (947)
||+++|+|.+++..... ..+++.+++.++.|++.||+|||+ .+ |+||||||+||+++.++.++++|||++..
T Consensus 89 e~~~~~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~ 162 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGTN---FVVDQSQAVKFALDMARGMAFLHT---LEPLIPRHALNSRSVMIDEDMTARISMADVKFS 162 (271)
T ss_dssp ECCTTCBHHHHHHSCSS---CCCCHHHHHHHHHHHHHHHHHHTT---SSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT
T ss_pred cccCCCcHHHHHhhccc---CCCCHHHHHHHHHHHHHHHHHHhc---CCCceecCCCccceEEEcCCcceeEEeccceee
Confidence 99999999999965332 358999999999999999999996 67 99999999999999999999999988654
Q ss_pred cCCCCCcceeecccccccccCccccccCCcCc---ccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhh
Q 002255 746 APDNGKHSIETRLAGTFGYLAPEYAVTGRVTT---KVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDT 822 (947)
Q Consensus 746 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 822 (947)
... ....||+.|+|||++.+..++. ++||||||+++|||++|+.||......+.
T Consensus 163 ~~~-------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~---------------- 219 (271)
T 3kmu_A 163 FQS-------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEI---------------- 219 (271)
T ss_dssp TSC-------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHH----------------
T ss_pred ecc-------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHH----------------
Confidence 322 2246899999999998765544 79999999999999999999976543211
Q ss_pred HHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 002255 823 FRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAE 874 (947)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~ 874 (947)
.......... ..........+.+++.+||+.||++||++.|+++.|+.+.+
T Consensus 220 ~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 220 GMKVALEGLR-PTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp HHHHHHSCCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred HHHHHhcCCC-CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 1111111111 11112233568899999999999999999999999998753
No 75
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=4.3e-40 Score=378.99 Aligned_cols=258 Identities=31% Similarity=0.510 Sum_probs=205.5
Q ss_pred hcCCCcCceecccCceEEEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEEE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVYE 668 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 668 (947)
.++|++.+.||+|+||.||+|.++.+..||||+++.... ..++|.+|++++++++||||+++++++.+ +..++|||
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e 258 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 258 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC---CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEeh
Confidence 467888999999999999999998888899999986532 24678999999999999999999999876 67899999
Q ss_pred ecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceecCC
Q 002255 669 YMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPD 748 (947)
Q Consensus 669 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~ 748 (947)
|+++|+|.+++..... ..+++.+++.++.||+.||+|||+ ++|+||||||+|||+++++.+||+|||+++....
T Consensus 259 ~~~~gsL~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 332 (452)
T 1fmk_A 259 YMSKGSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIED 332 (452)
T ss_dssp CCTTCBHHHHHSHHHH---TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCTTC----
T ss_pred hhcCCCHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEECCCCCEEECCCccceecCC
Confidence 9999999999965322 348899999999999999999997 8999999999999999999999999999987654
Q ss_pred CCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhcChhhHHHHh
Q 002255 749 NGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDETQSEDSVHLVTWFRRMHINKDTFRKAI 827 (947)
Q Consensus 749 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 827 (947)
.. ........++..|+|||++....++.++|||||||++|||++ |+.||.+....+. .+.+
T Consensus 333 ~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~-----------------~~~i 394 (452)
T 1fmk_A 333 NE-YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV-----------------LDQV 394 (452)
T ss_dssp -----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH-----------------HHHH
T ss_pred Cc-eecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHH-----------------HHHH
Confidence 22 122233457889999999998999999999999999999999 9999976543211 1111
Q ss_pred hccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 002255 828 DRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAEL 875 (947)
Q Consensus 828 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~ 875 (947)
...... +.+......+.+++.+||+.||++||++.++++.|+.+...
T Consensus 395 ~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~ 441 (452)
T 1fmk_A 395 ERGYRM-PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441 (452)
T ss_dssp HTTCCC-CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred HcCCCC-CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence 111110 11122345688999999999999999999999999987644
No 76
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=9.3e-40 Score=355.67 Aligned_cols=250 Identities=26% Similarity=0.397 Sum_probs=196.7
Q ss_pred cCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccCh------------------------HHHHHHHHHHHHHHc
Q 002255 590 NNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSE------------------------KGFAEFKSEIAVLTK 644 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~------------------------~~~~~~~~E~~~l~~ 644 (947)
++|++.+.||+|+||.||+|... +|+.||||++....... ...+.+.+|++++++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 92 (298)
T 2zv2_A 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK 92 (298)
T ss_dssp TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence 68999999999999999999875 68899999997543211 123568999999999
Q ss_pred CCCCCcceEEEEEEe--CCeeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCC
Q 002255 645 VRHRHLVGLLGYCLD--GNERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDL 722 (947)
Q Consensus 645 l~h~niv~l~~~~~~--~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDl 722 (947)
++||||+++++++.+ ++..++||||+++++|.+++.. ..+++.++..++.||+.||+|||+ .+|+||||
T Consensus 93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dl 163 (298)
T 2zv2_A 93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL------KPLSEDQARFYFQDLIKGIEYLHY---QKIIHRDI 163 (298)
T ss_dssp CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCC
T ss_pred CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCC
Confidence 999999999999986 5688999999999999876532 358999999999999999999997 79999999
Q ss_pred CCCcEEEcCCCcEEEeecCcceecCCCCCcceeecccccccccCccccccCC---cCcccccccHHHHHHHHHhCCCCCC
Q 002255 723 KPSNILLGDDMRAKVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGR---VTTKVDVFSFGVILMELITGRKALD 799 (947)
Q Consensus 723 kp~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwSlGvil~elltg~~p~~ 799 (947)
||+||+++.++.+||+|||+++....... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||.
T Consensus 164 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~ 241 (298)
T 2zv2_A 164 KPSNLLVGEDGHIKIADFGVSNEFKGSDA--LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFM 241 (298)
T ss_dssp CGGGEEECTTSCEEECCCTTCEECSSSSC--EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred CHHHEEECCCCCEEEecCCCccccccccc--cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCC
Confidence 99999999999999999999987654322 234467999999999987654 4788999999999999999999997
Q ss_pred ccCccchhhHHHHHHHhhcChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 800 ETQSEDSVHLVTWFRRMHINKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 800 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
...... .. ..+........ ........+.+++.+||+.||++||++.|+++
T Consensus 242 ~~~~~~---~~-------------~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 242 DERIMC---LH-------------SKIKSQALEFP-DQPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp CSSHHH---HH-------------HHHHHCCCCCC-SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CccHHH---HH-------------HHHhcccCCCC-CccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 643211 11 11111111111 11122356889999999999999999999865
No 77
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=6.3e-40 Score=370.05 Aligned_cols=253 Identities=21% Similarity=0.357 Sum_probs=201.9
Q ss_pred cCCCcCceecccCceEEEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHHHHcCC--CCCcceEEEEEEeCCeeEEEE
Q 002255 590 NNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVR--HRHLVGLLGYCLDGNERLLVY 667 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lV~ 667 (947)
.+|++.+.||+|+||.||+|...+++.||||++..........+.+.+|+.++++++ ||||+++++++..++..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 468999999999999999999888999999999876656677788999999999996 599999999999999999999
Q ss_pred EecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceecC
Q 002255 668 EYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 747 (947)
Q Consensus 668 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~ 747 (947)
| +.+++|.+++.... .+++.++..++.||+.||+|||+ .+|+||||||+|||++ ++.+||+|||+++...
T Consensus 136 E-~~~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~ 205 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKK-----SIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 205 (390)
T ss_dssp E-CCSEEHHHHHHHCS-----SCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-
T ss_pred e-cCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEEE-CCeEEEEecCcccccc
Confidence 9 56899999986532 47888999999999999999996 8999999999999995 5899999999998765
Q ss_pred CCCCcceeecccccccccCcccccc-----------CCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHh
Q 002255 748 DNGKHSIETRLAGTFGYLAPEYAVT-----------GRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRM 816 (947)
Q Consensus 748 ~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~ 816 (947)
...........+||+.|+|||++.+ ..++.++|||||||++|||++|+.||......
T Consensus 206 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~------------ 273 (390)
T 2zmd_A 206 PDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ------------ 273 (390)
T ss_dssp --------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCH------------
T ss_pred CCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHH------------
Confidence 4333323345679999999999865 36889999999999999999999999754321
Q ss_pred hcChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 002255 817 HINKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNV 868 (947)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 868 (947)
...+..+++....... +......+.+|+.+||+.||++||++.|+++.
T Consensus 274 ---~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 274 ---ISKLHAIIDPNHEIEF-PDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp ---HHHHHHHHCTTSCCCC-CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ---HHHHHHHhCccccCCC-CccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 1112233333222111 11113457899999999999999999999874
No 78
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=4.1e-39 Score=354.18 Aligned_cols=275 Identities=20% Similarity=0.282 Sum_probs=211.6
Q ss_pred hcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCC--eeEE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGN--ERLL 665 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~l 665 (947)
.++|.+.++||+|+||.||+|... +|+.||||++..... ....+.+.+|++++++++||||+++++++.... ..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL 86 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEE
Confidence 367899999999999999999876 589999999975432 233567889999999999999999999998765 7799
Q ss_pred EEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEE----cCCCcEEEeecC
Q 002255 666 VYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL----GDDMRAKVADFG 741 (947)
Q Consensus 666 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill----~~~~~~kl~DfG 741 (947)
||||+++++|.+++...... ..+++.+++.++.||+.||+|||+ .+|+||||||+||++ +.++.+||+|||
T Consensus 87 v~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg 161 (319)
T 4euu_A 87 IMEFCPCGSLYTVLEEPSNA--YGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161 (319)
T ss_dssp EEECCTTCBHHHHHHSGGGT--TCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEECTTSCEEEEECCCT
T ss_pred EEeCCCCCCHHHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEeccCCCCceEEEccCC
Confidence 99999999999999764332 338999999999999999999997 899999999999999 788889999999
Q ss_pred cceecCCCCCcceeecccccccccCccccc--------cCCcCcccccccHHHHHHHHHhCCCCCCccCccch-hhHHHH
Q 002255 742 LVRLAPDNGKHSIETRLAGTFGYLAPEYAV--------TGRVTTKVDVFSFGVILMELITGRKALDETQSEDS-VHLVTW 812 (947)
Q Consensus 742 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~-~~l~~~ 812 (947)
+++....... .....||+.|+|||++. +..++.++|||||||++|||++|+.||........ ......
T Consensus 162 ~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~ 238 (319)
T 4euu_A 162 AARELEDDEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYK 238 (319)
T ss_dssp TCEECCTTCC---BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHH
T ss_pred CceecCCCCc---eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHH
Confidence 9987755332 23457999999999886 46789999999999999999999999975443221 111111
Q ss_pred HHHhhcChhhHH---H----Hh--hccCC-CChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 002255 813 FRRMHINKDTFR---K----AI--DRTID-LDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLA 873 (947)
Q Consensus 813 ~~~~~~~~~~~~---~----~~--~~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~ 873 (947)
+..... ..... . .+ ...+. ...........+.+++.+||+.||++||++.|+++...+-.
T Consensus 239 ~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 239 IITGKP-SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp HHHHCC-TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred HhcCCC-cccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 111000 00000 0 00 00001 01223455567889999999999999999999999887654
No 79
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=3.4e-40 Score=383.93 Aligned_cols=257 Identities=27% Similarity=0.463 Sum_probs=212.4
Q ss_pred hcCCCcCceecccCceEEEEEEEcC-CcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELHD-GTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVY 667 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 667 (947)
.++|++.++||+|+||.||+|.++. +..||||+++... ...++|.+|++++++++|||||+++++|.+++..++||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 295 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 295 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc---cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEE
Confidence 4578889999999999999999874 8899999997653 23578999999999999999999999999999999999
Q ss_pred EecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceecC
Q 002255 668 EYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 747 (947)
Q Consensus 668 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~ 747 (947)
||+++|+|.+++..... ..+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++...
T Consensus 296 E~~~~g~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 369 (495)
T 1opk_A 296 EFMTYGNLLDYLRECNR---QEVSAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMT 369 (495)
T ss_dssp ECCTTCBHHHHHHHSCT---TTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCEEECCTTCEECCT
T ss_pred EccCCCCHHHHHHhcCc---CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChhhEEECCCCcEEEeecccceecc
Confidence 99999999999965332 458899999999999999999997 899999999999999999999999999998765
Q ss_pred CCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhcChhhHHHH
Q 002255 748 DNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDETQSEDSVHLVTWFRRMHINKDTFRKA 826 (947)
Q Consensus 748 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 826 (947)
... ........++..|+|||++....++.++|||||||++|||++ |+.||......+. .+.
T Consensus 370 ~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~-----------------~~~ 431 (495)
T 1opk_A 370 GDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV-----------------YEL 431 (495)
T ss_dssp TCC-EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH-----------------HHH
T ss_pred CCc-eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHH-----------------HHH
Confidence 422 222233456789999999998899999999999999999999 9999976543221 111
Q ss_pred hhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 002255 827 IDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLA 873 (947)
Q Consensus 827 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~ 873 (947)
+...... ..+......+.+|+.+||+.||++||++.+|++.|+.+.
T Consensus 432 ~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 432 LEKDYRM-ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp HHTTCCC-CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred HHcCCCC-CCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 2222111 111223356889999999999999999999999998764
No 80
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.2e-39 Score=365.80 Aligned_cols=254 Identities=23% Similarity=0.395 Sum_probs=202.4
Q ss_pred hcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccC-hHHHHHHHHHHHHHHcC-CCCCcceEEEEEEeCCeeEE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVS-EKGFAEFKSEIAVLTKV-RHRHLVGLLGYCLDGNERLL 665 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 665 (947)
.++|++.++||+|+||.||+|+.+ +++.||||++++.... ....+.+.+|..++.++ +|||||++++++.+++..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 367899999999999999999876 5789999999865433 23345688899999887 89999999999999999999
Q ss_pred EEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCccee
Q 002255 666 VYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 745 (947)
Q Consensus 666 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~ 745 (947)
||||+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 131 V~E~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFGla~~ 202 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE 202 (396)
T ss_dssp EEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEcCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEECCCCCEEEeecceeee
Confidence 99999999999988653 248899999999999999999997 8999999999999999999999999999986
Q ss_pred cCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHH
Q 002255 746 APDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRK 825 (947)
Q Consensus 746 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 825 (947)
...... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||......+.... .........
T Consensus 203 ~~~~~~--~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~-------~~~~~~~~~ 273 (396)
T 4dc2_A 203 GLRPGD--TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ-------NTEDYLFQV 273 (396)
T ss_dssp CCCTTC--CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC-------------CCHHHHHHH
T ss_pred cccCCC--ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccch-------hhHHHHHHH
Confidence 433222 23456899999999999999999999999999999999999999975432211000 000111223
Q ss_pred HhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCH
Q 002255 826 AIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDM 862 (947)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 862 (947)
+....+..+.. ....+.+|+.+||+.||++||++
T Consensus 274 i~~~~~~~p~~---~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 274 ILEKQIRIPRS---LSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp HHHCCCCCCTT---SCHHHHHHHHHHTCSCTTTSTTC
T ss_pred HhccccCCCCc---CCHHHHHHHHHHhcCCHhHcCCC
Confidence 33333333222 33467899999999999999996
No 81
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-39 Score=356.09 Aligned_cols=246 Identities=28% Similarity=0.439 Sum_probs=206.1
Q ss_pred cCCCcCceecccCceEEEEEEEc-CCcEEEEEEeccccc-ChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEE
Q 002255 590 NNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVV-SEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVY 667 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 667 (947)
++|++.+.||+|+||.||+|+.+ +|+.||+|+++.... .....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 67899999999999999999876 689999999976432 1234567889999999999999999999999999999999
Q ss_pred EecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceecC
Q 002255 668 EYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 747 (947)
Q Consensus 668 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~ 747 (947)
||+++|+|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+||+++.++.+||+|||+++...
T Consensus 86 e~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~ 157 (318)
T 1fot_A 86 DYIEGGELFSLLRKS-----QRFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVP 157 (318)
T ss_dssp CCCCSCBHHHHHHHT-----SSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCSSCEECS
T ss_pred eCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChheEEEcCCCCEEEeecCcceecC
Confidence 999999999999653 247889999999999999999996 899999999999999999999999999998764
Q ss_pred CCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHHHh
Q 002255 748 DNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKAI 827 (947)
Q Consensus 748 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 827 (947)
.. ....+||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..+..++
T Consensus 158 ~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~----------------~~~~~i~ 216 (318)
T 1fot_A 158 DV-----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM----------------KTYEKIL 216 (318)
T ss_dssp SC-----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH----------------HHHHHHH
T ss_pred Cc-----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH----------------HHHHHHH
Confidence 32 23457999999999999999999999999999999999999999764421 1223333
Q ss_pred hccCCCChhcHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q 002255 828 DRTIDLDEETLASISTVADLAGHCCAREPYQRP-----DMGHVVN 867 (947)
Q Consensus 828 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 867 (947)
......+. ....++.+++.+|++.||++|| ++.|+++
T Consensus 217 ~~~~~~p~---~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 217 NAELRFPP---FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp HCCCCCCT---TSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred hCCCCCCC---CCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 33333222 1234678999999999999999 7888765
No 82
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=7.2e-40 Score=351.36 Aligned_cols=256 Identities=28% Similarity=0.462 Sum_probs=195.3
Q ss_pred hcCCCcCceecccCceEEEEEEEcCCcEEEEEEecccccC--hHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVS--EKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLV 666 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 666 (947)
.++|+..+.||+|+||.||+|.+. |+.||||+++..... ....+.+.+|+++++.++||||+++++++.+++..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 367889999999999999999876 899999998754322 23357889999999999999999999999999999999
Q ss_pred EEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcC--------CCcEEEe
Q 002255 667 YEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD--------DMRAKVA 738 (947)
Q Consensus 667 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~--------~~~~kl~ 738 (947)
|||+++++|.+++.. ..+++..++.++.|++.||+|||+.+..+|+||||||+||+++. ++.+||+
T Consensus 85 ~e~~~~~~L~~~~~~------~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~ 158 (271)
T 3dtc_A 85 MEFARGGPLNRVLSG------KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKIT 158 (271)
T ss_dssp EECCTTEEHHHHHTS------SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEEC
T ss_pred EEcCCCCCHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEc
Confidence 999999999998843 34889999999999999999999832223999999999999986 7789999
Q ss_pred ecCcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhc
Q 002255 739 DFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHI 818 (947)
Q Consensus 739 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~ 818 (947)
|||+++...... .....||+.|+|||++.+..++.++||||||+++|||++|+.||........
T Consensus 159 Dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~------------ 222 (271)
T 3dtc_A 159 DFGLAREWHRTT----KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAV------------ 222 (271)
T ss_dssp CCCC-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHH------------
T ss_pred cCCccccccccc----ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH------------
Confidence 999998654432 2235799999999999988999999999999999999999999976542211
Q ss_pred ChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 002255 819 NKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSL 872 (947)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l 872 (947)
.......... ..........+.+++.+|++.||++||++.|+++.|+++
T Consensus 223 ----~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 223 ----AYGVAMNKLA-LPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp ----HHHHHTSCCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred ----HHhhhcCCCC-CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 1111111111 111122335688999999999999999999999999764
No 83
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.1e-39 Score=357.82 Aligned_cols=267 Identities=28% Similarity=0.438 Sum_probs=204.5
Q ss_pred HhcCCCcCceecccCceEEEEEEEc----CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCC--
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGELH----DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGN-- 661 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-- 661 (947)
..++|.+.+.||+|+||.||+|... ++..||||+++.........+.+.+|+.++++++||||+++++++.+.+
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 111 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ 111 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence 3567889999999999999999764 3458999999876666677788999999999999999999999998755
Q ss_pred ---eeEEEEEecCCCchhhhhhcccc-cCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEE
Q 002255 662 ---ERLLVYEYMPQGTLSRHLFNRKE-EGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKV 737 (947)
Q Consensus 662 ---~~~lV~e~~~~gsL~~~l~~~~~-~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl 737 (947)
..++||||+++|+|.+++..... .....+++..++.++.||+.||+|||+ .+|+||||||+||+++.++.+||
T Consensus 112 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kl 188 (313)
T 3brb_A 112 GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSN---RNFLHRDLAARNCMLRDDMTVCV 188 (313)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCSGGGEEECTTSCEEE
T ss_pred CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEE
Confidence 34999999999999999854321 233568999999999999999999996 89999999999999999999999
Q ss_pred eecCcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHh
Q 002255 738 ADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDETQSEDSVHLVTWFRRM 816 (947)
Q Consensus 738 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~l~~~~~~~ 816 (947)
+|||+++...............+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+.
T Consensus 189 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~---------- 258 (313)
T 3brb_A 189 ADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEM---------- 258 (313)
T ss_dssp CSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH----------
T ss_pred eecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHH----------
Confidence 99999987654332223344567889999999999899999999999999999999 8899976543221
Q ss_pred hcChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 002255 817 HINKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAEL 875 (947)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~ 875 (947)
...+..... ..........+.+++.+||+.||++||++.++++.|+++.+.
T Consensus 259 ------~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~ 309 (313)
T 3brb_A 259 ------YDYLLHGHR--LKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES 309 (313)
T ss_dssp ------HHHHHTTCC--CCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ------HHHHHcCCC--CCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 111111111 111122335688999999999999999999999999998754
No 84
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=7e-40 Score=361.14 Aligned_cols=258 Identities=28% Similarity=0.442 Sum_probs=201.4
Q ss_pred cCCCcCceecccCceEEEEEEEc-CCc----EEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeE
Q 002255 590 NNFSEENVLGRGGFGTVYKGELH-DGT----KIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERL 664 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~----~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 664 (947)
++|++.++||+|+||.||+|.+. +++ +||+|.+.... .....+.+.+|+.++++++||||+++++++..+. .+
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS-SCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc-CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 67999999999999999999864 444 35777775432 3345678999999999999999999999998765 78
Q ss_pred EEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcce
Q 002255 665 LVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 744 (947)
Q Consensus 665 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~ 744 (947)
+||||+.+|+|.+++.... ..+++..++.++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 93 ~v~~~~~~g~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~ 165 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEECCCSSCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTC--
T ss_pred EEEEecCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHhh---CCCcCCCCCHHHEEEcCCCCEEEccCccee
Confidence 9999999999999996643 348899999999999999999997 899999999999999999999999999998
Q ss_pred ecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhcChhhH
Q 002255 745 LAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDETQSEDSVHLVTWFRRMHINKDTF 823 (947)
Q Consensus 745 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 823 (947)
...............||+.|+|||++.+..++.++|||||||++|||++ |+.||......+.
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~----------------- 228 (327)
T 3lzb_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI----------------- 228 (327)
T ss_dssp --------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH-----------------
T ss_pred EccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH-----------------
Confidence 7655433333344567889999999999999999999999999999999 9999976543321
Q ss_pred HHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 002255 824 RKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAE 874 (947)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~ 874 (947)
...+..... ..........+.+++.+||+.||.+||++.|+++.|+.+..
T Consensus 229 ~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 278 (327)
T 3lzb_A 229 SSILEKGER-LPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp HHHHHTTCC-CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred HHHHHcCCC-CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 112221111 11112233468899999999999999999999999998863
No 85
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=356.31 Aligned_cols=258 Identities=32% Similarity=0.531 Sum_probs=201.4
Q ss_pred cCCCcCceecccCceEEEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEEEe
Q 002255 590 NNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVYEY 669 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 669 (947)
++|++.+.||+|+||.||+|++. ++.||||++... ...+.+.+|++++++++||||+++++++. +..++||||
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~ 80 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE----SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEY 80 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST----THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEEC
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh----hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEc
Confidence 57888999999999999999886 789999998643 34578999999999999999999999876 457999999
Q ss_pred cCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCc-EEEeecCcceecCC
Q 002255 670 MPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR-AKVADFGLVRLAPD 748 (947)
Q Consensus 670 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~-~kl~DfGla~~~~~ 748 (947)
+++|+|.+++..... ...+++..++.++.|+++||+|||+...++|+||||||+||+++.++. +||+|||+++....
T Consensus 81 ~~~~~L~~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~ 158 (307)
T 2eva_A 81 AEGGSLYNVLHGAEP--LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT 158 (307)
T ss_dssp CTTCBHHHHHHCSSS--EECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------
T ss_pred CCCCCHHHHHhccCC--CCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccc
Confidence 999999999965432 134788899999999999999999754478999999999999998886 79999999876533
Q ss_pred CCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHHHhh
Q 002255 749 NGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKAID 828 (947)
Q Consensus 749 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 828 (947)
. .....||+.|+|||++.+..++.++||||||+++|||++|+.||........ .. .+. ...
T Consensus 159 ~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~-~~~------------~~~ 219 (307)
T 2eva_A 159 H-----MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF-RI-MWA------------VHN 219 (307)
T ss_dssp -----------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHH-HH-HHH------------HHT
T ss_pred c-----cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHH-HH-HHH------------Hhc
Confidence 2 1234699999999999988999999999999999999999999975432211 00 000 000
Q ss_pred ccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhC
Q 002255 829 RTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAELWK 877 (947)
Q Consensus 829 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~~~ 877 (947)
... ..........+.+++.+|++.||++||++.|+++.|+.+.+.+.
T Consensus 220 ~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 266 (307)
T 2eva_A 220 GTR--PPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFP 266 (307)
T ss_dssp TCC--CCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCC
T ss_pred CCC--CCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhcc
Confidence 000 11111233567899999999999999999999999999876543
No 86
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.4e-39 Score=374.52 Aligned_cols=252 Identities=31% Similarity=0.490 Sum_probs=207.7
Q ss_pred hcCCCcCceecccCceEEEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCC-eeEEEE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGN-ERLLVY 667 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lV~ 667 (947)
.++|++.+.||+|+||.||+|.++ |+.||||+++... ..+.|.+|++++++++|||||++++++.+.+ ..++||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~ 266 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 266 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT----TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch----HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEE
Confidence 467888999999999999999886 7899999997542 3467899999999999999999999987765 789999
Q ss_pred EecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceecC
Q 002255 668 EYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 747 (947)
Q Consensus 668 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~ 747 (947)
||+++|+|.+++..... ..+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++...
T Consensus 267 e~~~~g~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 340 (450)
T 1k9a_A 267 EYMAKGSLVDYLRSRGR---SVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 340 (450)
T ss_dssp ECCTTCBHHHHHHHHCT---TTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EecCCCcHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEECCCCCEEEeeCCCccccc
Confidence 99999999999976432 347889999999999999999997 899999999999999999999999999998653
Q ss_pred CCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhcChhhHHHH
Q 002255 748 DNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDETQSEDSVHLVTWFRRMHINKDTFRKA 826 (947)
Q Consensus 748 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 826 (947)
... ....+++.|+|||++.+..++.++|||||||++|||++ |+.||......+.. ..
T Consensus 341 ~~~-----~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~-----------------~~ 398 (450)
T 1k9a_A 341 STQ-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV-----------------PR 398 (450)
T ss_dssp -----------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHH-----------------HH
T ss_pred ccc-----cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH-----------------HH
Confidence 321 12357889999999999999999999999999999998 99999765433221 11
Q ss_pred hhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 002255 827 IDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAE 874 (947)
Q Consensus 827 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~ 874 (947)
+..... ...+......+.+++.+||+.||++||++.++++.|+.+..
T Consensus 399 i~~~~~-~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~ 445 (450)
T 1k9a_A 399 VEKGYK-MDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRT 445 (450)
T ss_dssp HHTTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHcCCC-CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 111111 01112234568899999999999999999999999998875
No 87
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=2.6e-40 Score=376.16 Aligned_cols=262 Identities=22% Similarity=0.323 Sum_probs=209.8
Q ss_pred HHHHHHHhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEeccccc-ChHHHHHHHHHHHHHHcCCCCCcceEEEEEEe
Q 002255 582 IQVLRNVTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVV-SEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLD 659 (947)
Q Consensus 582 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 659 (947)
+.+++...++|++.++||+|+||.||+|+.+ +++.||||++.+... .....+.+.+|+.++..++||||+++++++.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 3445556789999999999999999999886 478999999975321 11222348899999999999999999999999
Q ss_pred CCeeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEee
Q 002255 660 GNERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVAD 739 (947)
Q Consensus 660 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~D 739 (947)
++..++||||+++|+|.+++.... ..+++..+..++.||+.||+|||+ .+||||||||+|||++.++.+||+|
T Consensus 146 ~~~~~lV~Ey~~gg~L~~~l~~~~----~~l~e~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILl~~~g~vkL~D 218 (437)
T 4aw2_A 146 DNNLYLVMDYYVGGDLLTLLSKFE----DRLPEEMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLAD 218 (437)
T ss_dssp SSEEEEEECCCTTCBHHHHHHTTT----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECC
T ss_pred CCEEEEEEecCCCCcHHHHHHHcc----CCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeeEcCCCCEEEcc
Confidence 999999999999999999996532 348999999999999999999997 8999999999999999999999999
Q ss_pred cCcceecCCCCCcceeecccccccccCccccc-----cCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHH
Q 002255 740 FGLVRLAPDNGKHSIETRLAGTFGYLAPEYAV-----TGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFR 814 (947)
Q Consensus 740 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~ 814 (947)
||+++....... ......+||+.|+|||++. ...++.++|||||||++|||++|+.||......+.
T Consensus 219 FGla~~~~~~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~-------- 289 (437)
T 4aw2_A 219 FGSCLKLMEDGT-VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET-------- 289 (437)
T ss_dssp CTTCEECCTTSC-EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH--------
T ss_pred hhhhhhcccCCC-cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHH--------
Confidence 999987655332 2234468999999999987 56789999999999999999999999986543221
Q ss_pred HhhcChhhHHHHhhc--cCCCChhcHHHHHHHHHHHHHhcccCCCC--CCCHHHHHH
Q 002255 815 RMHINKDTFRKAIDR--TIDLDEETLASISTVADLAGHCCAREPYQ--RPDMGHVVN 867 (947)
Q Consensus 815 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~ 867 (947)
+..++.. .+..+.........+.+|+.+||..+|++ ||++.|+++
T Consensus 290 --------~~~i~~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 290 --------YGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp --------HHHHHTHHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred --------HHhhhhccccccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 1111111 11112111123356789999999888888 999999876
No 88
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-39 Score=363.87 Aligned_cols=252 Identities=20% Similarity=0.312 Sum_probs=206.9
Q ss_pred HhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEE
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLV 666 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 666 (947)
+.++|++.+.||+|+||.||+|..+ +|+.||+|++... .......+.+|++++++++||||+++++++.++...++|
T Consensus 49 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 126 (387)
T 1kob_A 49 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTP--YPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLI 126 (387)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--SHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEE
T ss_pred cccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEeccc--chhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEE
Confidence 3578999999999999999999875 6899999998754 334456789999999999999999999999999999999
Q ss_pred EEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcC--CCcEEEeecCcce
Q 002255 667 YEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD--DMRAKVADFGLVR 744 (947)
Q Consensus 667 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~--~~~~kl~DfGla~ 744 (947)
|||+++|+|.+++.... ..+++.++..++.||+.||+|||+ .+|+||||||+|||++. ++.+||+|||+++
T Consensus 127 ~E~~~gg~L~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~vkL~DFG~a~ 199 (387)
T 1kob_A 127 LEFLSGGELFDRIAAED----YKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLAT 199 (387)
T ss_dssp EECCCCCBHHHHTTCTT----CCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCCTTCE
T ss_pred EEcCCCCcHHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccchHHeEEecCCCCceEEEecccce
Confidence 99999999999885432 348999999999999999999997 89999999999999974 5789999999998
Q ss_pred ecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHH
Q 002255 745 LAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFR 824 (947)
Q Consensus 745 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 824 (947)
....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .. .
T Consensus 200 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~---~~-------------~ 260 (387)
T 1kob_A 200 KLNPDEI---VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE---TL-------------Q 260 (387)
T ss_dssp ECCTTSC---EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH---HH-------------H
T ss_pred ecCCCcc---eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHH---HH-------------H
Confidence 7755322 233579999999999998899999999999999999999999997654221 11 1
Q ss_pred HHhhccCCCChh-cHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 825 KAIDRTIDLDEE-TLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 825 ~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
.+.......... .......+.+++.+||+.||++||++.|+++
T Consensus 261 ~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 261 NVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp HHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 111111111111 1123356789999999999999999999976
No 89
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=4.2e-40 Score=356.50 Aligned_cols=266 Identities=24% Similarity=0.364 Sum_probs=201.4
Q ss_pred cCCCcCceecccCceEEEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEEEe
Q 002255 590 NNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVYEY 669 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 669 (947)
++|++.+.||+|+||.||+|+..+|+.||+|++..........+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 57899999999999999999988899999999976543444456788999999999999999999999999999999999
Q ss_pred cCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceecCCC
Q 002255 670 MPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPDN 749 (947)
Q Consensus 670 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~ 749 (947)
+++ +|.+++.... ..+++..+..++.||+.||+|||+ ++|+||||||+||+++.++.+||+|||+++.....
T Consensus 82 ~~~-~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 153 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCE----GGLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIP 153 (288)
T ss_dssp CSE-EHHHHHHTST----TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-
T ss_pred cCC-CHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEeECccccccCcc
Confidence 974 8988885532 348889999999999999999997 89999999999999999999999999999866432
Q ss_pred CCcceeecccccccccCcccccc-CCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcCh-hhHHHH-
Q 002255 750 GKHSIETRLAGTFGYLAPEYAVT-GRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINK-DTFRKA- 826 (947)
Q Consensus 750 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~- 826 (947)
.. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+... .......... ..+...
T Consensus 154 ~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 229 (288)
T 1ob3_A 154 VR--KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLM--RIFRILGTPNSKNWPNVT 229 (288)
T ss_dssp ----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH--HHHHHHCCCCTTTSTTGG
T ss_pred cc--ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHHHHHCCCChhhchhhh
Confidence 21 1234578999999999875 458999999999999999999999997654332211 1111110000 000000
Q ss_pred ----hhccCCC------ChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 827 ----IDRTIDL------DEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 827 ----~~~~~~~------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
.++.... ..........+.+++.+||+.||++||++.|+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 230 ELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp GSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0000000 0000112356789999999999999999999876
No 90
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.9e-39 Score=351.24 Aligned_cols=254 Identities=31% Similarity=0.558 Sum_probs=203.0
Q ss_pred cCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHH-----HHHHHHHHHHHHcCCCCCcceEEEEEEeCCee
Q 002255 590 NNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKG-----FAEFKSEIAVLTKVRHRHLVGLLGYCLDGNER 663 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~-----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 663 (947)
++|++.+.||+|+||.||+|+.. +++.||+|++......... .+.+.+|++++++++||||+++++++.+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 67889999999999999999874 7899999998654322211 167899999999999999999999986654
Q ss_pred EEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCC--eeecCCCCCcEEEcCCCc-----EE
Q 002255 664 LLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQS--FIHRDLKPSNILLGDDMR-----AK 736 (947)
Q Consensus 664 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~--ivHrDlkp~Nill~~~~~-----~k 736 (947)
++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+ .+ |+||||||+||+++.++. +|
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~l~~~l~~lH~---~~~~ivH~dikp~Nil~~~~~~~~~~~~k 169 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLDKA----HPIKWSVKLRLMLDIALGIEYMQN---QNPPIVHRDLRSPNIFLQSLDENAPVCAK 169 (287)
T ss_dssp EEEEECCTTCBHHHHHHCTT----SCCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCSCCSGGGEEESCCCTTCSCCEE
T ss_pred eEEEEecCCCCHHHHHhccc----CCccHHHHHHHHHHHHHHHHHHHh---CCCCeecCCCCcceEEEeccCCCCceeEE
Confidence 79999999999999886533 358999999999999999999996 67 999999999999988776 99
Q ss_pred EeecCcceecCCCCCcceeecccccccccCcccc--ccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHH
Q 002255 737 VADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYA--VTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFR 814 (947)
Q Consensus 737 l~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~--~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~ 814 (947)
|+|||+++.... ......||+.|+|||++ ....++.++|||||||++|||++|+.||......... ..
T Consensus 170 l~Dfg~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~-~~---- 239 (287)
T 4f0f_A 170 VADFGLSQQSVH-----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK-FI---- 239 (287)
T ss_dssp ECCCTTCBCCSS-----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHH-HH----
T ss_pred eCCCCccccccc-----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHH-HH----
Confidence 999999975433 23346799999999998 3456789999999999999999999999765433211 11
Q ss_pred HhhcChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 002255 815 RMHINKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSL 872 (947)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l 872 (947)
......... ..........+.+++.+||+.||++||++.|+++.|+++
T Consensus 240 ---------~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 240 ---------NMIREEGLR-PTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp ---------HHHHHSCCC-CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred ---------HHHhccCCC-CCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 111111111 111122345688999999999999999999999999764
No 91
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=8e-40 Score=350.17 Aligned_cols=256 Identities=29% Similarity=0.468 Sum_probs=210.9
Q ss_pred cCCCcCceecccCceEEEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEEEe
Q 002255 590 NNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVYEY 669 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 669 (947)
++|++.+.||+|+||.||+|...+++.||+|++...... .+++.+|++++++++||||+++++++.+++..++||||
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEF 84 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBC---HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECC
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCC---HHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeC
Confidence 578889999999999999999988899999999865433 36789999999999999999999999999999999999
Q ss_pred cCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceecCCC
Q 002255 670 MPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPDN 749 (947)
Q Consensus 670 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~ 749 (947)
+++++|.+++.... ..+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 85 ~~~~~L~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 157 (267)
T 3t9t_A 85 MEHGCLSDYLRTQR----GLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 157 (267)
T ss_dssp CTTCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred CCCCcHHHHHhhCc----ccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEECCCCCEEEcccccccccccc
Confidence 99999999996532 347899999999999999999997 89999999999999999999999999999865432
Q ss_pred CCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhcChhhHHHHhh
Q 002255 750 GKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDETQSEDSVHLVTWFRRMHINKDTFRKAID 828 (947)
Q Consensus 750 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 828 (947)
. ........|++.|+|||++.+..++.++||||||+++|||++ |+.||......+. ...+..
T Consensus 158 ~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~----------------~~~i~~ 220 (267)
T 3t9t_A 158 Q-YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV----------------VEDIST 220 (267)
T ss_dssp H-HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH----------------HHHHHT
T ss_pred c-ccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHH----------------HHHHhc
Confidence 1 112233467889999999988899999999999999999999 8999976442211 111111
Q ss_pred ccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 002255 829 RTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAE 874 (947)
Q Consensus 829 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~ 874 (947)
. .. ...+......+.+++.+|++.||++||++.++++.|+++.+
T Consensus 221 ~-~~-~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 221 G-FR-LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp T-CC-CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred C-Cc-CCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 1 10 00111223567899999999999999999999999998865
No 92
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.9e-39 Score=367.25 Aligned_cols=270 Identities=17% Similarity=0.273 Sum_probs=207.6
Q ss_pred cCCCcCceeccc--CceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEE
Q 002255 590 NNFSEENVLGRG--GFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLV 666 (947)
Q Consensus 590 ~~~~~~~~lg~G--~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 666 (947)
++|++.++||+| +||.||+|+.+ +|+.||||++..........+.+.+|+.++++++|||||++++++.+++..++|
T Consensus 25 ~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 104 (389)
T 3gni_B 25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVV 104 (389)
T ss_dssp GGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred CcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEE
Confidence 678999999999 99999999886 699999999987766677778899999999999999999999999999999999
Q ss_pred EEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceec
Q 002255 667 YEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 746 (947)
Q Consensus 667 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~ 746 (947)
|||+++|+|.+++..... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||.+...
T Consensus 105 ~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~ 178 (389)
T 3gni_B 105 TSFMAYGSAKDLICTHFM---DGMNELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSM 178 (389)
T ss_dssp EECCTTCBHHHHHHHTCT---TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEccCCCCHHHHHhhhcc---cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccccceee
Confidence 999999999999866432 348899999999999999999997 89999999999999999999999999998654
Q ss_pred CCCCCc-----ceeecccccccccCcccccc--CCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhh--
Q 002255 747 PDNGKH-----SIETRLAGTFGYLAPEYAVT--GRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMH-- 817 (947)
Q Consensus 747 ~~~~~~-----~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~-- 817 (947)
...+.. .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+.... ......
T Consensus 179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~--~~~~~~~~ 256 (389)
T 3gni_B 179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLE--KLNGTVPC 256 (389)
T ss_dssp EETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHH--C-------
T ss_pred ccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH--HhcCCCCc
Confidence 322111 11223478999999999987 5799999999999999999999999976544322110 000000
Q ss_pred ------cChhh-------------HHHHhh--------ccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 818 ------INKDT-------------FRKAID--------RTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 818 ------~~~~~-------------~~~~~~--------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
..... ....+. ...............+.+|+.+||+.||++|||+.|+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~ 333 (389)
T 3gni_B 257 LLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLN 333 (389)
T ss_dssp -------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred cccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 00000 000000 000000111223356889999999999999999999975
No 93
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=2e-39 Score=351.91 Aligned_cols=267 Identities=23% Similarity=0.324 Sum_probs=203.4
Q ss_pred cCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEEE
Q 002255 590 NNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVYE 668 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 668 (947)
++|++.+.||+|+||.||+|... +|+.||||++............+.+|+.++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 57899999999999999999875 68999999998765556666888999999999999999999999999999999999
Q ss_pred ecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceecCC
Q 002255 669 YMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPD 748 (947)
Q Consensus 669 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~ 748 (947)
|+++ ++.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 82 ~~~~-~l~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lH~---~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 153 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCN----GDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGI 153 (292)
T ss_dssp CCSE-EHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCS
T ss_pred cCCC-CHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccceecCC
Confidence 9975 6666554322 348999999999999999999997 7999999999999999999999999999987654
Q ss_pred CCCcceeecccccccccCccccccCC-cCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcCh-hhHHHH
Q 002255 749 NGKHSIETRLAGTFGYLAPEYAVTGR-VTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINK-DTFRKA 826 (947)
Q Consensus 749 ~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~ 826 (947)
... ......||+.|+|||++.+.. ++.++|||||||++|||++|..||........ .+........... ..+...
T Consensus 154 ~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~ 230 (292)
T 3o0g_A 154 PVR--CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD-QLKRIFRLLGTPTEEQWPSM 230 (292)
T ss_dssp CCS--CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHH-HHHHHHHHHCCCCTTTCTTG
T ss_pred ccc--cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHH-HHHHHHHHhCCCChhhhhhh
Confidence 322 233457899999999987765 79999999999999999999888644332111 1111111111000 000000
Q ss_pred hh---c--------cCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 827 ID---R--------TIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 827 ~~---~--------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
.. . ..............+.+|+.+||+.||++|||++|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 231 TKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp GGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 00 0 00000011123356789999999999999999999976
No 94
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=2.6e-40 Score=364.57 Aligned_cols=258 Identities=26% Similarity=0.458 Sum_probs=204.3
Q ss_pred cCCCcCceecccCceEEEEEEEc-CCcE----EEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeE
Q 002255 590 NNFSEENVLGRGGFGTVYKGELH-DGTK----IAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERL 664 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~----vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 664 (947)
++|++.++||+|+||.||+|.+. +++. ||+|.+.... .......+.+|+.++++++||||+++++++. ++..+
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 90 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS-GRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQ 90 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTT-SCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccc-cHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccE
Confidence 57889999999999999999865 3443 7888775432 2223456788999999999999999999886 56689
Q ss_pred EEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcce
Q 002255 665 LVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 744 (947)
Q Consensus 665 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~ 744 (947)
+||||+++|+|.+++.... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 91 ~v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 163 (325)
T 3kex_A 91 LVTQYLPLGSLLDHVRQHR----GALGPQLLLNWGVQIAKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVAD 163 (325)
T ss_dssp EEEECCTTCBSHHHHHSSG----GGSCTTHHHHHHHHHHHHHHHHHH---TTCCCSCCSSTTEEESSSSCEEECSCSGGG
T ss_pred EEEEeCCCCCHHHHHHHcc----ccCCHHHHHHHHHHHHHHHHHHHh---CCCCCCccchheEEECCCCeEEECCCCccc
Confidence 9999999999999986542 347888999999999999999997 799999999999999999999999999999
Q ss_pred ecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhcChhhH
Q 002255 745 LAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDETQSEDSVHLVTWFRRMHINKDTF 823 (947)
Q Consensus 745 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 823 (947)
...............||..|+|||++.+..++.++|||||||++|||++ |+.||......+..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~---------------- 227 (325)
T 3kex_A 164 LLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVP---------------- 227 (325)
T ss_dssp GSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHH----------------
T ss_pred ccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHH----------------
Confidence 8765544444455678889999999998999999999999999999999 99999865433211
Q ss_pred HHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 002255 824 RKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAE 874 (947)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~ 874 (947)
..+..... ..........+.+++.+||+.||.+||++.|+++.|+.+..
T Consensus 228 -~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 228 -DLLEKGER-LAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp -HHHHTTCB-CCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred -HHHHcCCC-CCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 11111100 00011122347799999999999999999999999998753
No 95
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=363.85 Aligned_cols=251 Identities=25% Similarity=0.375 Sum_probs=204.6
Q ss_pred cCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccc-cChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEE
Q 002255 590 NNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAV-VSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVY 667 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 667 (947)
++|++.+.||+|+||.||+|... +++.||+|++.... ......+.+.+|++++++++|||||++++++.+.+..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 67899999999999999999876 58899999987543 12234567889999999999999999999999999999999
Q ss_pred EecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceecC
Q 002255 668 EYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 747 (947)
Q Consensus 668 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~ 747 (947)
||+.+|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 95 e~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 166 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQN-----VHFKEETVKLFICELVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLP 166 (384)
T ss_dssp CCCTTEEHHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred ecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEECCCCCEEEeccceeeecc
Confidence 999999999998643 348899999999999999999997 899999999999999999999999999998775
Q ss_pred CCCCcceeecccccccccCcccccc---CCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHH
Q 002255 748 DNGKHSIETRLAGTFGYLAPEYAVT---GRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFR 824 (947)
Q Consensus 748 ~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 824 (947)
... ......||+.|+|||++.. ..++.++|||||||++|||++|+.||.............
T Consensus 167 ~~~---~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~------------- 230 (384)
T 4fr4_A 167 RET---QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVH------------- 230 (384)
T ss_dssp TTC---CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHH-------------
T ss_pred CCC---ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHH-------------
Confidence 432 2345689999999999864 458999999999999999999999997654333222211
Q ss_pred HHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCC-HHHHHH
Q 002255 825 KAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPD-MGHVVN 867 (947)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~ 867 (947)
.+.......+. .....+.+|+.+||+.||++||+ +.++.+
T Consensus 231 ~~~~~~~~~p~---~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 231 TFETTVVTYPS---AWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp HHHHCCCCCCT---TSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred HHhhcccCCCC---cCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 11111122111 22356789999999999999998 666654
No 96
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=2.6e-39 Score=351.85 Aligned_cols=277 Identities=19% Similarity=0.280 Sum_probs=212.6
Q ss_pred HHhcCCCcCceecccCceEEEEEEE-cCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEE-EeCCeeE
Q 002255 587 NVTNNFSEENVLGRGGFGTVYKGEL-HDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYC-LDGNERL 664 (947)
Q Consensus 587 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~ 664 (947)
.+.++|++.+.||+|+||.||+|+. .+++.||||++.... ...++.+|+++++.++|++++..+.++ ..++..+
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (296)
T 4hgt_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT----KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 81 (296)
T ss_dssp -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEE
T ss_pred ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc----cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceE
Confidence 4568899999999999999999986 578999999876442 224578899999999988877766665 6678889
Q ss_pred EEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEE---cCCCcEEEeecC
Q 002255 665 LVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL---GDDMRAKVADFG 741 (947)
Q Consensus 665 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill---~~~~~~kl~DfG 741 (947)
+||||+ +++|.+++.... ..+++.++..++.||+.||+|||+ .+|+||||||+||++ +.++.+||+|||
T Consensus 82 lv~e~~-~~~L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg 153 (296)
T 4hgt_A 82 MVMELL-GPSLEDLFNFCS----RKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFG 153 (296)
T ss_dssp EEEECC-CCBHHHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECCGGGTTCEEECCCT
T ss_pred EEEEcc-CCCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeeeeccCCCCeEEEecCc
Confidence 999999 999999986432 348999999999999999999997 899999999999999 788999999999
Q ss_pred cceecCCCCCc-----ceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHh
Q 002255 742 LVRLAPDNGKH-----SIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRM 816 (947)
Q Consensus 742 la~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~ 816 (947)
+++........ .......||+.|+|||++.+..++.++|||||||++|||++|+.||..............+...
T Consensus 154 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 233 (296)
T 4hgt_A 154 LAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEK 233 (296)
T ss_dssp TCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHH
T ss_pred cceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcc
Confidence 99876543321 1223467999999999999999999999999999999999999999876544332222211111
Q ss_pred hcChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhCCCCCCCCCc
Q 002255 817 HINKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAELWKPAEPDSDDI 886 (947)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~~~~~~~~~~~~ 886 (947)
.. .. ............+.+++.+|++.||++||++.++++.|+++.+..........||
T Consensus 234 ~~---------~~--~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~~~~~~~dw 292 (296)
T 4hgt_A 234 KM---------ST--PIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDW 292 (296)
T ss_dssp HH---------HS--CHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTCCTTCCCGG
T ss_pred cc---------cc--hhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCCCccCccch
Confidence 00 00 0000001123568899999999999999999999999999988766555444444
No 97
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=8.4e-40 Score=361.60 Aligned_cols=250 Identities=26% Similarity=0.401 Sum_probs=204.6
Q ss_pred HhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEeccccc-ChHHHHHHHHHHHHHHcC-CCCCcceEEEEEEeCCeeE
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVV-SEKGFAEFKSEIAVLTKV-RHRHLVGLLGYCLDGNERL 664 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 664 (947)
..++|.+.++||+|+||.||+|+.+ +|+.||||+++.... .....+.+..|..++..+ +||||+++++++.+.+..+
T Consensus 15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~ 94 (345)
T 1xjd_A 15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF 94 (345)
T ss_dssp -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEE
Confidence 4578999999999999999999886 689999999976421 123456778899999887 8999999999999999999
Q ss_pred EEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcce
Q 002255 665 LVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 744 (947)
Q Consensus 665 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~ 744 (947)
+||||+++|+|.+++... ..+++.++..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 95 lv~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~ 166 (345)
T 1xjd_A 95 FVMEYLNGGDLMYHIQSC-----HKFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCK 166 (345)
T ss_dssp EEEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred EEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCChhhEEECCCCCEEEeEChhhh
Confidence 999999999999998653 248899999999999999999997 899999999999999999999999999998
Q ss_pred ecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHH
Q 002255 745 LAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFR 824 (947)
Q Consensus 745 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 824 (947)
....... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .+.
T Consensus 167 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~----------------~~~ 228 (345)
T 1xjd_A 167 ENMLGDA--KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE----------------LFH 228 (345)
T ss_dssp CCCCTTC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----------------HHH
T ss_pred hcccCCC--cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHH----------------HHH
Confidence 6433221 2345689999999999999999999999999999999999999997654321 111
Q ss_pred HHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHH-HHH
Q 002255 825 KAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMG-HVV 866 (947)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl 866 (947)
.+.......+. .....+.+++.+||+.||++||++. +++
T Consensus 229 ~i~~~~~~~p~---~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 229 SIRMDNPFYPR---WLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp HHHHCCCCCCT---TSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred HHHhCCCCCCc---ccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 22222222221 1235678999999999999999997 554
No 98
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=4e-39 Score=348.09 Aligned_cols=253 Identities=23% Similarity=0.384 Sum_probs=210.1
Q ss_pred HhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEE
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLV 666 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 666 (947)
+.++|++.+.||+|+||.||+|..+ +|+.||+|++..........+.+.+|++++++++||||+++++++.+++..++|
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 83 (284)
T 3kk8_A 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 83 (284)
T ss_dssp TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence 4578999999999999999999875 589999999987766777778899999999999999999999999999999999
Q ss_pred EEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCc---EEEeecCcc
Q 002255 667 YEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR---AKVADFGLV 743 (947)
Q Consensus 667 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~---~kl~DfGla 743 (947)
|||+++++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+|||++
T Consensus 84 ~e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~ 155 (284)
T 3kk8_A 84 FDLVTGGELFEDIVAR-----EFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLA 155 (284)
T ss_dssp ECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred EecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcCcCCCCHHHEEEecCCCCCcEEEeeceee
Confidence 9999999999888653 348899999999999999999997 89999999999999986655 999999999
Q ss_pred eecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhH
Q 002255 744 RLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTF 823 (947)
Q Consensus 744 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 823 (947)
........ .....||+.|+|||++.+..++.++||||||+++|+|++|+.||........ .
T Consensus 156 ~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~----------------~ 216 (284)
T 3kk8_A 156 IEVNDSEA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL----------------Y 216 (284)
T ss_dssp EECCSSCB---CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----------------H
T ss_pred EEcccCcc---ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHH----------------H
Confidence 87654322 2345799999999999999999999999999999999999999976542211 1
Q ss_pred HHHhhccCCCCh-hcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 824 RKAIDRTIDLDE-ETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 824 ~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
..+......... ........+.+++.+|++.||++||++.|+++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 217 AQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp HHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHhccccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 111111111111 11123356789999999999999999999977
No 99
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=2.1e-39 Score=359.74 Aligned_cols=246 Identities=25% Similarity=0.345 Sum_probs=206.2
Q ss_pred cCCCcCceecccCceEEEEEEEc-CCcEEEEEEeccccc-ChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEE
Q 002255 590 NNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVV-SEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVY 667 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 667 (947)
++|++.+.||+|+||.||+|+.+ +|+.||||++..... .....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 67999999999999999999876 689999999975432 2234567889999999999999999999999999999999
Q ss_pred EecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceecC
Q 002255 668 EYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 747 (947)
Q Consensus 668 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~ 747 (947)
||+++|+|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++...
T Consensus 121 e~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~ 192 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRI-----GRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192 (350)
T ss_dssp ECCTTCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred cCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCccceEEECCCCCEEEcccccceecc
Confidence 999999999999653 238899999999999999999997 899999999999999999999999999998764
Q ss_pred CCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHHHh
Q 002255 748 DNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKAI 827 (947)
Q Consensus 748 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 827 (947)
.. ....+||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .+..+.
T Consensus 193 ~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~----------------~~~~i~ 251 (350)
T 1rdq_E 193 GR-----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ----------------IYEKIV 251 (350)
T ss_dssp SC-----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----------------HHHHHH
T ss_pred CC-----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHH----------------HHHHHH
Confidence 42 234579999999999999999999999999999999999999997654221 122333
Q ss_pred hccCCCChhcHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHH
Q 002255 828 DRTIDLDEETLASISTVADLAGHCCAREPYQRPD-----MGHVVN 867 (947)
Q Consensus 828 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 867 (947)
......+. .....+.+++.+||+.||++||+ +.||++
T Consensus 252 ~~~~~~p~---~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 252 SGKVRFPS---HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp HCCCCCCT---TCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred cCCCCCCC---CCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 33333222 22356789999999999999998 777755
No 100
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.8e-40 Score=371.40 Aligned_cols=261 Identities=23% Similarity=0.317 Sum_probs=207.8
Q ss_pred HHHHHHHhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEeccccc-ChHHHHHHHHHHHHHHcCCCCCcceEEEEEEe
Q 002255 582 IQVLRNVTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVV-SEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLD 659 (947)
Q Consensus 582 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 659 (947)
+++.+...++|++.++||+|+||.||+|+.+ +|+.||||++.+... .....+.+.+|+.++..++||||+++++++.+
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 132 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD 132 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 3444555789999999999999999999885 699999999975321 22234558899999999999999999999999
Q ss_pred CCeeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEee
Q 002255 660 GNERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVAD 739 (947)
Q Consensus 660 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~D 739 (947)
++..|+||||+++|+|.+++.... ..+++..+..++.||+.||+|||+ .+||||||||+|||++.++.+||+|
T Consensus 133 ~~~~~lVmE~~~gg~L~~~l~~~~----~~l~~~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILld~~g~vkL~D 205 (412)
T 2vd5_A 133 ENYLYLVMEYYVGGDLLTLLSKFG----ERIPAEMARFYLAEIVMAIDSVHR---LGYVHRDIKPDNILLDRCGHIRLAD 205 (412)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHHS----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECC
T ss_pred CCEEEEEEcCCCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccCHHHeeecCCCCEEEee
Confidence 999999999999999999996532 248899999999999999999997 8999999999999999999999999
Q ss_pred cCcceecCCCCCcceeecccccccccCccccc-------cCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHH
Q 002255 740 FGLVRLAPDNGKHSIETRLAGTFGYLAPEYAV-------TGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTW 812 (947)
Q Consensus 740 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~ 812 (947)
||+++....... ......+||+.|+|||++. ...++.++|||||||++|||++|+.||......+.
T Consensus 206 FGla~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~------ 278 (412)
T 2vd5_A 206 FGSCLKLRADGT-VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAET------ 278 (412)
T ss_dssp CTTCEECCTTSC-EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH------
T ss_pred chhheeccCCCc-cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHH------
Confidence 999987755332 1223468999999999987 35789999999999999999999999976543221
Q ss_pred HHHhhcChhhHHHHhh--ccCCCChhcHHHHHHHHHHHHHhcccCCCCC---CCHHHHHH
Q 002255 813 FRRMHINKDTFRKAID--RTIDLDEETLASISTVADLAGHCCAREPYQR---PDMGHVVN 867 (947)
Q Consensus 813 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---Ps~~evl~ 867 (947)
+.+++. ..+..+........++.+|+.+||. +|++| |++.|+++
T Consensus 279 ----------~~~i~~~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 279 ----------YGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp ----------HHHHHTHHHHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred ----------HHHHHhcccCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 111111 1111111112233567899999999 99998 58888755
No 101
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=9.3e-40 Score=358.96 Aligned_cols=275 Identities=25% Similarity=0.393 Sum_probs=219.1
Q ss_pred HHHHHHHhcCCCcCceecccCceEEEEEEE------cCCcEEEEEEecccccChHHHHHHHHHHHHHHcC-CCCCcceEE
Q 002255 582 IQVLRNVTNNFSEENVLGRGGFGTVYKGEL------HDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKV-RHRHLVGLL 654 (947)
Q Consensus 582 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~ 654 (947)
........++|++.+.||+|+||.||+|.+ .+++.||||+++... .....+.+.+|+++++++ +||||++++
T Consensus 19 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 97 (316)
T 2xir_A 19 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLL 97 (316)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred ccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC-CcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence 344445568999999999999999999975 246889999997653 445567899999999999 799999999
Q ss_pred EEEEeCC-eeEEEEEecCCCchhhhhhcccccC-----------CCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCC
Q 002255 655 GYCLDGN-ERLLVYEYMPQGTLSRHLFNRKEEG-----------LKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDL 722 (947)
Q Consensus 655 ~~~~~~~-~~~lV~e~~~~gsL~~~l~~~~~~~-----------~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDl 722 (947)
+++...+ ..++||||+++|+|.+++....... ...+++..++.++.|++.||+|||+ .+|+||||
T Consensus 98 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~di 174 (316)
T 2xir_A 98 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDL 174 (316)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHH---TTCCCSCC
T ss_pred EEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHh---CCcccccC
Confidence 9988754 5899999999999999997643210 1238899999999999999999997 89999999
Q ss_pred CCCcEEEcCCCcEEEeecCcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCCcc
Q 002255 723 KPSNILLGDDMRAKVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDET 801 (947)
Q Consensus 723 kp~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~~~ 801 (947)
||+||+++.++.+||+|||+++...............||+.|+|||++.+..++.++||||||+++|||++ |+.||...
T Consensus 175 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~ 254 (316)
T 2xir_A 175 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254 (316)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred ccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCccc
Confidence 99999999999999999999987655443333445678899999999999999999999999999999998 99999765
Q ss_pred CccchhhHHHHHHHhhcChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhC
Q 002255 802 QSEDSVHLVTWFRRMHINKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAELWK 877 (947)
Q Consensus 802 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~~~ 877 (947)
...+. +...+..... ..........+.+++.+||+.||++||++.|+++.|+.+.+...
T Consensus 255 ~~~~~----------------~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 313 (316)
T 2xir_A 255 KIDEE----------------FCRRLKEGTR-MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313 (316)
T ss_dssp CCSHH----------------HHHHHHHTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred chhHH----------------HHHHhccCcc-CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 43221 1111111110 00111123468899999999999999999999999999876543
No 102
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=2.5e-40 Score=373.46 Aligned_cols=258 Identities=22% Similarity=0.310 Sum_probs=207.1
Q ss_pred HHHHHHhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEeccccc-ChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeC
Q 002255 583 QVLRNVTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVV-SEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDG 660 (947)
Q Consensus 583 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 660 (947)
+.++...++|++.++||+|+||.||+|+.+ +++.||+|++.+... .....+.+.+|+.+++.++|||||++++++.++
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 344455688999999999999999999876 588999999875321 112234578999999999999999999999999
Q ss_pred CeeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeec
Q 002255 661 NERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADF 740 (947)
Q Consensus 661 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~Df 740 (947)
+..|+||||+++|+|.+++... .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+||
T Consensus 142 ~~~~lV~E~~~gg~L~~~l~~~------~~~e~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DF 212 (410)
T 3v8s_A 142 RYLYMVMEYMPGGDLVNLMSNY------DVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADF 212 (410)
T ss_dssp SEEEEEECCCTTEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCC
T ss_pred CEEEEEEeCCCCCcHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeeECCCCCEEEecc
Confidence 9999999999999999988542 37888999999999999999997 89999999999999999999999999
Q ss_pred CcceecCCCCCcceeecccccccccCccccccCC----cCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHh
Q 002255 741 GLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGR----VTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRM 816 (947)
Q Consensus 741 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~ 816 (947)
|+++....... ......+||+.|+|||++.+.. ++.++|||||||++|||++|+.||......+.
T Consensus 213 G~a~~~~~~~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~---------- 281 (410)
T 3v8s_A 213 GTCMKMNKEGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT---------- 281 (410)
T ss_dssp TTCEECCTTSE-EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHH----------
T ss_pred ceeEeeccCCc-ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhH----------
Confidence 99987755322 2233568999999999997655 88999999999999999999999976543221
Q ss_pred hcChhhHHHHhhcc--CCCChhcHHHHHHHHHHHHHhcccCCCC--CCCHHHHHH
Q 002255 817 HINKDTFRKAIDRT--IDLDEETLASISTVADLAGHCCAREPYQ--RPDMGHVVN 867 (947)
Q Consensus 817 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~ 867 (947)
+..++... +..+. .......+.+|+.+||+.+|++ ||++.||++
T Consensus 282 ------~~~i~~~~~~~~~p~-~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 282 ------YSKIMNHKNSLTFPD-DNDISKEAKNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp ------HHHHHTHHHHCCCCT-TCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred ------HHHHHhccccccCCC-cccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence 11222111 11111 0112345789999999999988 999999976
No 103
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2e-39 Score=366.73 Aligned_cols=270 Identities=26% Similarity=0.404 Sum_probs=197.7
Q ss_pred HHHhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCC-CCCcceEEEEEEeCC--
Q 002255 586 RNVTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVR-HRHLVGLLGYCLDGN-- 661 (947)
Q Consensus 586 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~-- 661 (947)
+.+.++|++.+.||+|+||.||+|... +|+.||||++..........+.+.+|+.+++++. ||||+++++++...+
T Consensus 5 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~ 84 (388)
T 3oz6_A 5 RHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDR 84 (388)
T ss_dssp HHHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSS
T ss_pred CcccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCC
Confidence 456789999999999999999999875 6899999999766556677788899999999997 999999999997544
Q ss_pred eeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecC
Q 002255 662 ERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 741 (947)
Q Consensus 662 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG 741 (947)
..|+||||++ ++|.+++.. ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 85 ~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG 154 (388)
T 3oz6_A 85 DVYLVFDYME-TDLHAVIRA------NILEPVHKQYVVYQLIKVIKYLHS---GGLLHRDMKPSNILLNAECHVKVADFG 154 (388)
T ss_dssp CEEEEEECCS-EEHHHHHHH------TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEEecccC-cCHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHeEEcCCCCEEecCCc
Confidence 6899999996 689888854 247888999999999999999997 899999999999999999999999999
Q ss_pred cceecCCCC-------------------CcceeecccccccccCcccccc-CCcCcccccccHHHHHHHHHhCCCCCCcc
Q 002255 742 LVRLAPDNG-------------------KHSIETRLAGTFGYLAPEYAVT-GRVTTKVDVFSFGVILMELITGRKALDET 801 (947)
Q Consensus 742 la~~~~~~~-------------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~p~~~~ 801 (947)
+++...... .....+..+||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.
T Consensus 155 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 234 (388)
T 3oz6_A 155 LSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGS 234 (388)
T ss_dssp TCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCC
Confidence 998764311 1112334689999999999876 67899999999999999999999999876
Q ss_pred CccchhhHHHHHHHhhcChhh------------HHHHhhccC-----CCC-hhc------------HHHHHHHHHHHHHh
Q 002255 802 QSEDSVHLVTWFRRMHINKDT------------FRKAIDRTI-----DLD-EET------------LASISTVADLAGHC 851 (947)
Q Consensus 802 ~~~~~~~l~~~~~~~~~~~~~------------~~~~~~~~~-----~~~-~~~------------~~~~~~l~~li~~c 851 (947)
...+....+ +......... +.+.+.... ... ... ......+.+|+.+|
T Consensus 235 ~~~~~~~~i--~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~ 312 (388)
T 3oz6_A 235 STMNQLERI--IGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKL 312 (388)
T ss_dssp SHHHHHHHH--HHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHH
T ss_pred CHHHHHHHH--HHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHh
Confidence 543332221 1111110000 000000000 000 000 01234678999999
Q ss_pred cccCCCCCCCHHHHHH
Q 002255 852 CAREPYQRPDMGHVVN 867 (947)
Q Consensus 852 l~~dP~~RPs~~evl~ 867 (947)
|+.||++|||+.|+++
T Consensus 313 L~~dP~~R~t~~e~l~ 328 (388)
T 3oz6_A 313 LQFNPNKRISANDALK 328 (388)
T ss_dssp CCSSGGGSCCHHHHTT
T ss_pred hccCcccCCCHHHHhC
Confidence 9999999999999876
No 104
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.2e-39 Score=353.14 Aligned_cols=259 Identities=27% Similarity=0.451 Sum_probs=214.5
Q ss_pred HhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEE
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLV 666 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 666 (947)
..++|++.+.||+|+||.||+|.++ ++..||+|++... ....+.+.+|++++++++||||+++++++.+++..++|
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v 87 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC---STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC---HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEE
Confidence 3467889999999999999999886 4889999998754 33457889999999999999999999999999999999
Q ss_pred EEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceec
Q 002255 667 YEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 746 (947)
Q Consensus 667 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~ 746 (947)
|||+++++|.+++..... ..+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 88 ~e~~~~~~L~~~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~ 161 (288)
T 3kfa_A 88 TEFMTYGNLLDYLRECNR---QEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLM 161 (288)
T ss_dssp EECCTTEEHHHHHHHCCT---TTSCHHHHHHHHHHHHHHHHHHHH---HTCCCSCCSGGGEEECGGGCEEECCCCGGGTS
T ss_pred EEcCCCCcHHHHHHhccc---CCccHhHHHHHHHHHHHHHHHHHH---CCccCCCCCcceEEEcCCCCEEEccCccceec
Confidence 999999999999965332 458999999999999999999997 79999999999999999999999999999876
Q ss_pred CCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhcChhhHHH
Q 002255 747 PDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDETQSEDSVHLVTWFRRMHINKDTFRK 825 (947)
Q Consensus 747 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 825 (947)
.... ........+|+.|+|||++.+..++.++||||||+++|+|++ |..||........ .+
T Consensus 162 ~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~-----------------~~ 223 (288)
T 3kfa_A 162 TGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV-----------------YE 223 (288)
T ss_dssp CSSS-SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH-----------------HH
T ss_pred cCCc-cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH-----------------HH
Confidence 5432 223344567889999999998899999999999999999999 9999976543221 11
Q ss_pred HhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 002255 826 AIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAE 874 (947)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~ 874 (947)
.+..... ..........+.+++.+|++.||.+||++.++++.|+.+.+
T Consensus 224 ~~~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~ 271 (288)
T 3kfa_A 224 LLEKDYR-MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271 (288)
T ss_dssp HHHTTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHhccCC-CCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHH
Confidence 1111111 11112233568899999999999999999999999998765
No 105
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1.9e-39 Score=349.75 Aligned_cols=258 Identities=28% Similarity=0.464 Sum_probs=210.2
Q ss_pred hcCCCcCceecccCceEEEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEEE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVYE 668 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 668 (947)
.++|++.+.||+|+||.||+|..++++.||||++..... ..+.+.+|++++++++||||+++++++. ++..++|||
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e 87 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM---SPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITE 87 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc---cHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEe
Confidence 467889999999999999999998888999999976532 3467899999999999999999999986 456899999
Q ss_pred ecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceecCC
Q 002255 669 YMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPD 748 (947)
Q Consensus 669 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~ 748 (947)
|+++++|.+++..... ..+++.++..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++....
T Consensus 88 ~~~~~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 161 (279)
T 1qpc_A 88 YMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIED 161 (279)
T ss_dssp CCTTCBHHHHTTSHHH---HTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred cCCCCCHHHHHhcCCC---CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHhhEEEcCCCCEEECCCcccccccC
Confidence 9999999999865322 248899999999999999999997 8999999999999999999999999999987754
Q ss_pred CCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhcChhhHHHHh
Q 002255 749 NGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDETQSEDSVHLVTWFRRMHINKDTFRKAI 827 (947)
Q Consensus 749 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 827 (947)
.. ........+++.|+|||++.+..++.++||||||+++|||++ |+.||......+. . ..+
T Consensus 162 ~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~---~--------------~~~ 223 (279)
T 1qpc_A 162 NE-YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV---I--------------QNL 223 (279)
T ss_dssp SC-EECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH---H--------------HHH
T ss_pred cc-cccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHH---H--------------HHH
Confidence 32 222234457889999999988899999999999999999999 8999976542211 1 111
Q ss_pred hccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 002255 828 DRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAEL 875 (947)
Q Consensus 828 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~ 875 (947)
..... ..........+.+++.+|++.||++||++.++++.|+.+...
T Consensus 224 ~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 270 (279)
T 1qpc_A 224 ERGYR-MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270 (279)
T ss_dssp HTTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hcccC-CCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHh
Confidence 11111 011112335688999999999999999999999999998754
No 106
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.5e-39 Score=357.41 Aligned_cols=275 Identities=26% Similarity=0.421 Sum_probs=214.2
Q ss_pred cCC-CcCceecccCceEEEEEEEc-----CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEe--CC
Q 002255 590 NNF-SEENVLGRGGFGTVYKGELH-----DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLD--GN 661 (947)
Q Consensus 590 ~~~-~~~~~lg~G~~g~Vy~~~~~-----~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~ 661 (947)
++| ++.+.||+|+||.||++.++ +|+.||||+++.. ......+.+.+|++++++++||||+++++++.+ ..
T Consensus 30 ~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (318)
T 3lxp_A 30 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD-AGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAA 108 (318)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTT-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTT
T ss_pred HHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccc-cChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCc
Confidence 344 88999999999999998753 5889999999765 345567789999999999999999999999987 46
Q ss_pred eeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecC
Q 002255 662 ERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 741 (947)
Q Consensus 662 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG 741 (947)
..++||||+++|+|.+++... .+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~------~~~~~~~~~i~~~l~~~l~~LH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg 179 (318)
T 3lxp_A 109 SLQLVMEYVPLGSLRDYLPRH------SIGLAQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFG 179 (318)
T ss_dssp EEEEEECCCTTCBHHHHGGGS------CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGG
T ss_pred eEEEEEecccCCcHHHHHhhC------CCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEEcCCCCEEECCcc
Confidence 789999999999999998542 38899999999999999999997 899999999999999999999999999
Q ss_pred cceecCCCCCc-ceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcCh
Q 002255 742 LVRLAPDNGKH-SIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINK 820 (947)
Q Consensus 742 la~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~ 820 (947)
+++........ .......||+.|+|||++.+..++.++||||||+++|||++|+.||........ ....+.... ...
T Consensus 180 ~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~-~~~~~~~~~-~~~ 257 (318)
T 3lxp_A 180 LAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFL-ELIGIAQGQ-MTV 257 (318)
T ss_dssp GCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHH-HHHCSCCHH-HHH
T ss_pred ccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhh-hhhcccccc-hhH
Confidence 99987654322 223345688899999999988999999999999999999999999975421100 000000000 001
Q ss_pred hhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhC
Q 002255 821 DTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAELWK 877 (947)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~~~ 877 (947)
..+.+.+..... ..........+.+++.+||+.||++||++.|+++.|+.+.+.+.
T Consensus 258 ~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 313 (318)
T 3lxp_A 258 LRLTELLERGER-LPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ 313 (318)
T ss_dssp HHHHHHHHTTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcccC-CCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhc
Confidence 112222222222 11122334568899999999999999999999999999987654
No 107
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=4.2e-39 Score=370.95 Aligned_cols=264 Identities=23% Similarity=0.328 Sum_probs=201.5
Q ss_pred HhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeC------
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDG------ 660 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 660 (947)
+.++|++.++||+|+||.||+|... +|+.||||++..........+++.+|+.+++.++|||||++++++...
T Consensus 60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 139 (464)
T 3ttj_A 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 139 (464)
T ss_dssp EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence 3578999999999999999999765 689999999987655666778899999999999999999999999654
Q ss_pred CeeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeec
Q 002255 661 NERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADF 740 (947)
Q Consensus 661 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~Df 740 (947)
.+.|+||||+++ +|.+.+.. .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+||
T Consensus 140 ~~~~lv~E~~~~-~l~~~~~~-------~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDlkp~NIll~~~~~~kl~DF 208 (464)
T 3ttj_A 140 QDVYLVMELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDF 208 (464)
T ss_dssp CEEEEEEECCSE-EHHHHHTS-------CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCC
T ss_pred CeEEEEEeCCCC-CHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChHhEEEeCCCCEEEEEE
Confidence 467999999965 46666532 27889999999999999999997 79999999999999999999999999
Q ss_pred CcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcC-
Q 002255 741 GLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHIN- 819 (947)
Q Consensus 741 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~- 819 (947)
|+++...... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||.+....+....+ +......
T Consensus 209 G~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i--~~~lg~p~ 283 (464)
T 3ttj_A 209 GLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKV--IEQLGTPC 283 (464)
T ss_dssp CCC-----CC---CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH--HHHHCSCC
T ss_pred EeeeecCCCc---ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH--HHhcCCCC
Confidence 9998764422 234468999999999999999999999999999999999999999876543322111 1111000
Q ss_pred -------hhhHHHHhhccCCCC-----------------hhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 820 -------KDTFRKAIDRTIDLD-----------------EETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 820 -------~~~~~~~~~~~~~~~-----------------~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
....+..+....... .........+.+|+.+||+.||++|||+.|+++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 284 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp HHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 111122222111100 111122456889999999999999999999987
No 108
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=4.9e-39 Score=356.25 Aligned_cols=253 Identities=24% Similarity=0.400 Sum_probs=203.6
Q ss_pred cCCCcCceecccCceEEEEEEEc-CCcEEEEEEeccccc-ChHHHHHHHHHHHHHHcC-CCCCcceEEEEEEeCCeeEEE
Q 002255 590 NNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVV-SEKGFAEFKSEIAVLTKV-RHRHLVGLLGYCLDGNERLLV 666 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV 666 (947)
++|++.+.||+|+||.||+|+.+ +|+.||+|++..... .....+.+.+|+.+++++ +||||+++++++.+++..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 57889999999999999999876 588999999986543 345567788999999998 899999999999999999999
Q ss_pred EEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceec
Q 002255 667 YEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 746 (947)
Q Consensus 667 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~ 746 (947)
|||+++|+|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++..
T Consensus 89 ~e~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~ 160 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 160 (345)
T ss_dssp ECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCGGGCBCS
T ss_pred EeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEEeccccccc
Confidence 9999999999998653 248899999999999999999997 89999999999999999999999999999864
Q ss_pred CCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHHH
Q 002255 747 PDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKA 826 (947)
Q Consensus 747 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 826 (947)
..... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||......+.... .........+
T Consensus 161 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~-------~~~~~~~~~i 231 (345)
T 3a8x_A 161 LRPGD--TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ-------NTEDYLFQVI 231 (345)
T ss_dssp CCTTC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC--------------CHHHHHHHH
T ss_pred cCCCC--cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCccccccccc-------ccHHHHHHHH
Confidence 33221 23456899999999999999999999999999999999999999975332111000 0001112223
Q ss_pred hhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCH
Q 002255 827 IDRTIDLDEETLASISTVADLAGHCCAREPYQRPDM 862 (947)
Q Consensus 827 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 862 (947)
.......+. .....+.+++.+||+.||++||++
T Consensus 232 ~~~~~~~p~---~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 232 LEKQIRIPR---SLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp HHCCCCCCT---TSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred HcCCCCCCC---CCCHHHHHHHHHHhcCCHhHCCCC
Confidence 333333222 233567899999999999999996
No 109
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=2.2e-39 Score=359.50 Aligned_cols=251 Identities=24% Similarity=0.365 Sum_probs=205.6
Q ss_pred HhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEeccccc-ChHHHHHHHHHHHHHHcC-CCCCcceEEEEEEeCCeeE
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVV-SEKGFAEFKSEIAVLTKV-RHRHLVGLLGYCLDGNERL 664 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 664 (947)
..++|++.++||+|+||.||+|+.+ +|+.||||+++.... .....+.+..|..++..+ +||||+++++++.+.+..|
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 3478999999999999999999886 478999999976432 223456788999999988 7999999999999999999
Q ss_pred EEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcce
Q 002255 665 LVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 744 (947)
Q Consensus 665 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~ 744 (947)
+||||+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 98 lv~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~ 169 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCK 169 (353)
T ss_dssp EEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred EEEeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEEcCCCcEEEEeCCccc
Confidence 999999999999998653 248899999999999999999997 899999999999999999999999999998
Q ss_pred ecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHH
Q 002255 745 LAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFR 824 (947)
Q Consensus 745 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 824 (947)
....... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..+.
T Consensus 170 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~----------------~~~~ 231 (353)
T 2i0e_A 170 ENIWDGV--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED----------------ELFQ 231 (353)
T ss_dssp CCCCTTC--CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH----------------HHHH
T ss_pred ccccCCc--ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH----------------HHHH
Confidence 6433221 234568999999999999999999999999999999999999999765422 1222
Q ss_pred HHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCH-----HHHHH
Q 002255 825 KAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDM-----GHVVN 867 (947)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~ 867 (947)
.+......++. ....++.+++.+||+.||++||++ .++++
T Consensus 232 ~i~~~~~~~p~---~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 232 SIMEHNVAYPK---SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp HHHHCCCCCCT---TSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred HHHhCCCCCCC---CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 33333333222 233567899999999999999964 55544
No 110
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=4.6e-39 Score=352.38 Aligned_cols=270 Identities=23% Similarity=0.354 Sum_probs=204.3
Q ss_pred hcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccc-cChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAV-VSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLV 666 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 666 (947)
.++|++.+.||+|+||.||+|... +|+.||||++.... ......+++.+|+.++++++||||+++++++.+++..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 357999999999999999999874 78999999997532 3455677899999999999999999999999999999999
Q ss_pred EEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceec
Q 002255 667 YEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 746 (947)
Q Consensus 667 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~ 746 (947)
|||+++++|.+++...... ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 111 ~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQ-KRLIPERTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFF 186 (310)
T ss_dssp EECCCSCBHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred EecCCCCCHHHHHHHhccc-ccCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence 9999999999998653322 2458899999999999999999997 89999999999999999999999999998866
Q ss_pred CCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHHH
Q 002255 747 PDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKA 826 (947)
Q Consensus 747 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 826 (947)
..... ......|++.|+|||++.+..++.++||||||+++|||++|+.||....... ..+.. .+
T Consensus 187 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~-------------~~ 250 (310)
T 2wqm_A 187 SSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL-YSLCK-------------KI 250 (310)
T ss_dssp --------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCH-HHHHH-------------HH
T ss_pred cCCCc--cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhH-HHHHH-------------Hh
Confidence 44221 2234578999999999998899999999999999999999999997543211 11111 11
Q ss_pred hhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhCCC
Q 002255 827 IDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAELWKPA 879 (947)
Q Consensus 827 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~~~~~ 879 (947)
...... ..........+.+++.+||+.||++||++.+|++.|+++...+..+
T Consensus 251 ~~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~~ 302 (310)
T 2wqm_A 251 EQCDYP-PLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASS 302 (310)
T ss_dssp HTTCSC-CCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC--
T ss_pred hcccCC-CCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhhh
Confidence 111111 0001122346889999999999999999999999999998766544
No 111
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=3.3e-39 Score=361.67 Aligned_cols=245 Identities=27% Similarity=0.381 Sum_probs=198.1
Q ss_pred CceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEEEecCCC
Q 002255 595 ENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVYEYMPQG 673 (947)
Q Consensus 595 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 673 (947)
.++||+|+||.||+|... +|+.||+|+++.. .....+++.+|++++++++||||+++++++.+++..++||||++++
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~ 171 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTR--GMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGG 171 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECC--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEccc--ccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence 578999999999999875 6899999999765 3345678999999999999999999999999999999999999999
Q ss_pred chhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEE--cCCCcEEEeecCcceecCCCCC
Q 002255 674 TLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL--GDDMRAKVADFGLVRLAPDNGK 751 (947)
Q Consensus 674 sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill--~~~~~~kl~DfGla~~~~~~~~ 751 (947)
+|.+++.... ..+++..+..++.||+.||+|||+ .+|+||||||+|||+ +.++.+||+|||+++.......
T Consensus 172 ~L~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~ 244 (373)
T 2x4f_A 172 ELFDRIIDES----YNLTELDTILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK 244 (373)
T ss_dssp EEHHHHHHTG----GGCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB
T ss_pred cHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc
Confidence 9999886533 348899999999999999999997 899999999999999 5678999999999997755332
Q ss_pred cceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHHHhhccC
Q 002255 752 HSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKAIDRTI 831 (947)
Q Consensus 752 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 831 (947)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .+..++....
T Consensus 245 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~----------------~~~~i~~~~~ 305 (373)
T 2x4f_A 245 ---LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAE----------------TLNNILACRW 305 (373)
T ss_dssp ---CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHH----------------HHHHHHHTCC
T ss_pred ---cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH----------------HHHHHHhccC
Confidence 233479999999999988899999999999999999999999997654321 1222222222
Q ss_pred CCChh-cHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 832 DLDEE-TLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 832 ~~~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
..... .......+.+|+.+||+.||.+||++.|+++
T Consensus 306 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 306 DLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp CSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 21111 1223456889999999999999999999987
No 112
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1.2e-39 Score=359.20 Aligned_cols=266 Identities=26% Similarity=0.443 Sum_probs=214.0
Q ss_pred HHhcCCCcCceecccCceEEEEEEEc------CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeC
Q 002255 587 NVTNNFSEENVLGRGGFGTVYKGELH------DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDG 660 (947)
Q Consensus 587 ~~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 660 (947)
...++|++.+.||+|+||.||+|... +++.||||++.... ......++.+|++++++++||||+++++++.++
T Consensus 22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 100 (322)
T 1p4o_A 22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 100 (322)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS-CHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSS
T ss_pred chhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc-CHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccC
Confidence 34578999999999999999999764 36789999987542 445567899999999999999999999999999
Q ss_pred CeeEEEEEecCCCchhhhhhcccc-----cCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcE
Q 002255 661 NERLLVYEYMPQGTLSRHLFNRKE-----EGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRA 735 (947)
Q Consensus 661 ~~~~lV~e~~~~gsL~~~l~~~~~-----~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~ 735 (947)
+..++||||+++|+|.+++..... .....+++..++.++.||+.||+|||+ ++|+||||||+||+++.++.+
T Consensus 101 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~NIli~~~~~~ 177 (322)
T 1p4o_A 101 QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTV 177 (322)
T ss_dssp SSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGGGEEECTTCCE
T ss_pred CccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCCccCCCccceEEEcCCCeE
Confidence 999999999999999999865331 112346899999999999999999997 799999999999999999999
Q ss_pred EEeecCcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCCccCccchhhHHHHHH
Q 002255 736 KVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDETQSEDSVHLVTWFR 814 (947)
Q Consensus 736 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~l~~~~~ 814 (947)
||+|||+++...............||+.|+|||++.+..++.++||||||+++|||++ |+.||......+.
T Consensus 178 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~-------- 249 (322)
T 1p4o_A 178 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV-------- 249 (322)
T ss_dssp EECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHH--------
T ss_pred EECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHH--------
Confidence 9999999986544322222333467889999999998899999999999999999999 8899976542211
Q ss_pred HhhcChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 002255 815 RMHINKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAE 874 (947)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~ 874 (947)
...+...... .........+.+++.+|++.||++||++.|+++.|+++..
T Consensus 250 --------~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 250 --------LRFVMEGGLL--DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp --------HHHHHTTCCC--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred --------HHHHHcCCcC--CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 1111111111 1112233568899999999999999999999999988754
No 113
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=6.9e-39 Score=348.48 Aligned_cols=276 Identities=20% Similarity=0.287 Sum_probs=215.6
Q ss_pred HhcCCCcCceecccCceEEEEEEE-cCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEE-EeCCeeEE
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGEL-HDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYC-LDGNERLL 665 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~l 665 (947)
+.++|++.+.||+|+||.||+|+. .+|+.||||++..... .+++.+|+.+++.++|++++..+.++ ..++..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l 82 (296)
T 3uzp_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVM 82 (296)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS----CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEE
T ss_pred eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc----hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEE
Confidence 357899999999999999999987 5799999999875432 24688999999999998877666655 56778899
Q ss_pred EEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEE---cCCCcEEEeecCc
Q 002255 666 VYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGL 742 (947)
Q Consensus 666 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill---~~~~~~kl~DfGl 742 (947)
||||+ +++|.+++.... ..+++.+++.++.|++.||+|||+ ++|+||||||+||++ +.++.+||+|||+
T Consensus 83 v~e~~-~~~L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~ 154 (296)
T 3uzp_A 83 VMELL-GPSLEDLFNFCS----RKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGL 154 (296)
T ss_dssp EEECC-CCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEEECCCTT
T ss_pred EEEec-CCCHHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHeEEecCCCCCeEEEeeCCC
Confidence 99999 999999986432 348999999999999999999997 899999999999999 4889999999999
Q ss_pred ceecCCCCCcc-----eeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhh
Q 002255 743 VRLAPDNGKHS-----IETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMH 817 (947)
Q Consensus 743 a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~ 817 (947)
++......... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+.......+....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 234 (296)
T 3uzp_A 155 AKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKK 234 (296)
T ss_dssp CEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccc
Confidence 98765533211 1234679999999999999899999999999999999999999998755433322222111110
Q ss_pred cChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhCCCCCCCCCc
Q 002255 818 INKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAELWKPAEPDSDDI 886 (947)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~~~~~~~~~~~~ 886 (947)
. .... ..+ .......+.+++.+||+.||++||++.++++.|+.+............+|
T Consensus 235 ~-~~~~-~~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~~~~~~dw 292 (296)
T 3uzp_A 235 M-STPI-EVL---------CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDW 292 (296)
T ss_dssp H-HSCH-HHH---------TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTCCSSCCCGG
T ss_pred c-CCch-HHH---------HhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCCcccccccc
Confidence 0 0000 000 01123568899999999999999999999999999987766555544444
No 114
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.8e-39 Score=358.76 Aligned_cols=264 Identities=23% Similarity=0.290 Sum_probs=206.6
Q ss_pred HHHHhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEeccccc---ChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeC
Q 002255 585 LRNVTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVV---SEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDG 660 (947)
Q Consensus 585 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 660 (947)
+..+.++|++.+.||+|+||.||+|... +++.||+|++..... .....+.+.+|++++++++||||+++++++.++
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 3567789999999999999999999875 688999999875421 344567899999999999999999999999999
Q ss_pred CeeEEEEEecCCCchhhhhhcccccC-----------------------------------CCcccHHHHHHHHHHHHHH
Q 002255 661 NERLLVYEYMPQGTLSRHLFNRKEEG-----------------------------------LKPLEWTRRLTIALDVARG 705 (947)
Q Consensus 661 ~~~~lV~e~~~~gsL~~~l~~~~~~~-----------------------------------~~~~~~~~~~~i~~~i~~~ 705 (947)
+..++||||+++|+|.+++....... ...+++..+..++.||+.|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 99999999999999999985321110 1234677788999999999
Q ss_pred HHHHhhccCCCeeecCCCCCcEEEcCCC--cEEEeecCcceecCCCCC--cceeecccccccccCcccccc--CCcCccc
Q 002255 706 VEYLHGLAHQSFIHRDLKPSNILLGDDM--RAKVADFGLVRLAPDNGK--HSIETRLAGTFGYLAPEYAVT--GRVTTKV 779 (947)
Q Consensus 706 L~~LH~~~~~~ivHrDlkp~Nill~~~~--~~kl~DfGla~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~--~~~~~~~ 779 (947)
|+|||+ .+|+||||||+||+++.++ .+||+|||+++....... ........||+.|+|||++.+ ..++.++
T Consensus 181 l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 257 (345)
T 3hko_A 181 LHYLHN---QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257 (345)
T ss_dssp HHHHHH---TTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred HHHHHH---CCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence 999997 7999999999999998776 899999999986533221 112345679999999999865 6789999
Q ss_pred ccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHHHhhccCCCCh-hcHHHHHHHHHHHHHhcccCCCC
Q 002255 780 DVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKAIDRTIDLDE-ETLASISTVADLAGHCCAREPYQ 858 (947)
Q Consensus 780 DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~ 858 (947)
|||||||++|||++|+.||......+ ....++........ ........+.+++.+||+.||++
T Consensus 258 DiwslG~il~el~~g~~pf~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~ 321 (345)
T 3hko_A 258 DAWSAGVLLHLLLMGAVPFPGVNDAD----------------TISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDE 321 (345)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHH----------------HHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTT
T ss_pred HHHHHHHHHHHHHHCCCCCCCCChHH----------------HHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhH
Confidence 99999999999999999997654322 12223333322211 11123456889999999999999
Q ss_pred CCCHHHHHH
Q 002255 859 RPDMGHVVN 867 (947)
Q Consensus 859 RPs~~evl~ 867 (947)
||++.|+++
T Consensus 322 Rps~~~~l~ 330 (345)
T 3hko_A 322 RFDAMRALQ 330 (345)
T ss_dssp SCCHHHHHH
T ss_pred CCCHHHHhc
Confidence 999999977
No 115
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.8e-39 Score=348.02 Aligned_cols=261 Identities=23% Similarity=0.387 Sum_probs=210.9
Q ss_pred cCCCcCc-eecccCceEEEEEEEc---CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEE
Q 002255 590 NNFSEEN-VLGRGGFGTVYKGELH---DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLL 665 (947)
Q Consensus 590 ~~~~~~~-~lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 665 (947)
++|.+.+ .||+|+||.||+|.+. ++..||||+++... .....+++.+|++++++++||||+++++++ ..+..++
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~l 86 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALML 86 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc-chhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEE
Confidence 4555665 9999999999999764 57889999997652 455678899999999999999999999999 5567899
Q ss_pred EEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCccee
Q 002255 666 VYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 745 (947)
Q Consensus 666 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~ 745 (947)
||||+++++|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 87 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~ 159 (287)
T 1u59_A 87 VMEMAGGGPLHKFLVGKR----EEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKA 159 (287)
T ss_dssp EEECCTTEEHHHHHTTCT----TTSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEeCCCCCHHHHHHhCC----ccCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCchheEEEcCCCCEEECcccceee
Confidence 999999999999985432 348999999999999999999997 8999999999999999999999999999987
Q ss_pred cCCCCCc-ceeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhcChhhH
Q 002255 746 APDNGKH-SIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDETQSEDSVHLVTWFRRMHINKDTF 823 (947)
Q Consensus 746 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 823 (947)
....... .......||+.|+|||++.+..++.++||||||+++|||++ |+.||......+. ..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~---~~------------ 224 (287)
T 1u59_A 160 LGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV---MA------------ 224 (287)
T ss_dssp CTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHH---HH------------
T ss_pred eccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHH---HH------------
Confidence 7543322 11233457899999999988889999999999999999999 9999976543211 11
Q ss_pred HHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhC
Q 002255 824 RKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAELWK 877 (947)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~~~ 877 (947)
.+..... ...+......+.+++.+|++.||++||++.++++.|+.+.....
T Consensus 225 --~i~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 275 (287)
T 1u59_A 225 --FIEQGKR-MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA 275 (287)
T ss_dssp --HHHTTCC-CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred --HHhcCCc-CCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence 1111100 11112234568899999999999999999999999999876544
No 116
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=3.9e-39 Score=349.46 Aligned_cols=259 Identities=25% Similarity=0.373 Sum_probs=206.4
Q ss_pred hcCCCcCc-eecccCceEEEEEEEc---CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeE
Q 002255 589 TNNFSEEN-VLGRGGFGTVYKGELH---DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERL 664 (947)
Q Consensus 589 ~~~~~~~~-~lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 664 (947)
.++|.+.+ .||+|+||.||+|.+. +++.||||+++.........+++.+|++++++++||||+++++++ ..+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 35677777 9999999999999653 468899999986654455578899999999999999999999999 667789
Q ss_pred EEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcce
Q 002255 665 LVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 744 (947)
Q Consensus 665 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~ 744 (947)
+||||+++++|.+++... ..+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 94 lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 165 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQN-----RHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSK 165 (291)
T ss_dssp EEEECCTTEEHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred EEEEeCCCCCHHHHHHhC-----cCCCHHHHHHHHHHHHHHHHHHHh---CCeEcCCCCcceEEEeCCCcEEEccCCcce
Confidence 999999999999999653 348899999999999999999997 799999999999999999999999999998
Q ss_pred ecCCCCCcc-eeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhcChhh
Q 002255 745 LAPDNGKHS-IETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDETQSEDSVHLVTWFRRMHINKDT 822 (947)
Q Consensus 745 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 822 (947)
......... ......+++.|+|||++.+..++.++||||||+++|||++ |+.||......+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~---------------- 229 (291)
T 1xbb_A 166 ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV---------------- 229 (291)
T ss_dssp ECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH----------------
T ss_pred eeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHH----------------
Confidence 775543321 1223456789999999988889999999999999999999 9999976543211
Q ss_pred HHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 002255 823 FRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAE 874 (947)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~ 874 (947)
...+..... ..........+.+++.+||+.||++||++.++++.|+++..
T Consensus 230 -~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 279 (291)
T 1xbb_A 230 -TAMLEKGER-MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 279 (291)
T ss_dssp -HHHHHTTCC-CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred -HHHHHcCCC-CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 111111100 11112234568899999999999999999999999998864
No 117
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=3.9e-39 Score=355.14 Aligned_cols=250 Identities=27% Similarity=0.435 Sum_probs=195.2
Q ss_pred hcCCCcCceecccCceEEEEEEE----cCCcEEEEEEeccccc--ChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCe
Q 002255 589 TNNFSEENVLGRGGFGTVYKGEL----HDGTKIAVKRMESAVV--SEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNE 662 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~----~~g~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 662 (947)
.++|++.+.||+|+||.||+|+. .+|+.||+|+++.... .......+.+|++++++++||||+++++++..++.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 36799999999999999999987 4789999999976532 22345668899999999999999999999999999
Q ss_pred eEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCc
Q 002255 663 RLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGL 742 (947)
Q Consensus 663 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGl 742 (947)
.++||||+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 167 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLERE-----GIFMEDTACFYLAEISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGL 167 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTSCEEECCCSC
T ss_pred EEEEEeCCCCCcHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCEEcccCCHHHeEECCCCcEEEEeCCc
Confidence 99999999999999998653 247888999999999999999997 7999999999999999999999999999
Q ss_pred ceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhh
Q 002255 743 VRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDT 822 (947)
Q Consensus 743 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 822 (947)
++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .
T Consensus 168 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~----------------~ 229 (327)
T 3a62_A 168 CKESIHDGT--VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKK----------------T 229 (327)
T ss_dssp C------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH----------------H
T ss_pred ccccccCCc--cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHH----------------H
Confidence 876433221 2334679999999999998899999999999999999999999997654221 1
Q ss_pred HHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q 002255 823 FRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRP-----DMGHVVN 867 (947)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 867 (947)
+..+.......+. .....+.+++.+||+.||++|| ++.|+++
T Consensus 230 ~~~i~~~~~~~p~---~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 230 IDKILKCKLNLPP---YLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp HHHHHHTCCCCCT---TSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred HHHHHhCCCCCCC---CCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 2222332222222 1235678999999999999999 6666655
No 118
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=2.2e-39 Score=360.23 Aligned_cols=257 Identities=25% Similarity=0.364 Sum_probs=194.4
Q ss_pred HHhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEE
Q 002255 587 NVTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLL 665 (947)
Q Consensus 587 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 665 (947)
.+.++|++.+.||+|+||.||+|+.+ +++.||||+++... ..+.+.+|++++++++||||+++++++.+++..++
T Consensus 50 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 125 (349)
T 2w4o_A 50 ALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV----DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISL 125 (349)
T ss_dssp CGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC--------------CHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch----hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEE
Confidence 35678999999999999999999886 57899999997542 34578899999999999999999999999999999
Q ss_pred EEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcC---CCcEEEeecCc
Q 002255 666 VYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD---DMRAKVADFGL 742 (947)
Q Consensus 666 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~---~~~~kl~DfGl 742 (947)
||||+++|+|.+++... ..+++.++..++.||+.||+|||+ .+|+||||||+||+++. ++.+||+|||+
T Consensus 126 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~ 197 (349)
T 2w4o_A 126 VLELVTGGELFDRIVEK-----GYYSERDAADAVKQILEAVAYLHE---NGIVHRDLKPENLLYATPAPDAPLKIADFGL 197 (349)
T ss_dssp EECCCCSCBHHHHHTTC-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESSSSTTCCEEECCCC-
T ss_pred EEEeCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCcccEEEecCCCCCCEEEccCcc
Confidence 99999999999998543 348899999999999999999997 79999999999999975 89999999999
Q ss_pred ceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhh
Q 002255 743 VRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDT 822 (947)
Q Consensus 743 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 822 (947)
++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ .
T Consensus 198 a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~---------------~ 259 (349)
T 2w4o_A 198 SKIVEHQV---LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQF---------------M 259 (349)
T ss_dssp ------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHH---------------H
T ss_pred ccccCccc---ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHH---------------H
Confidence 98664321 22345799999999999988999999999999999999999999976443211 1
Q ss_pred HHHHhhccCCCC-hhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhCCC
Q 002255 823 FRKAIDRTIDLD-EETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAELWKPA 879 (947)
Q Consensus 823 ~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~~~~~ 879 (947)
+..+........ +........+.+++.+||+.||++||++.|+++ ++|...
T Consensus 260 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~------hp~~~~ 311 (349)
T 2w4o_A 260 FRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ------HPWVTG 311 (349)
T ss_dssp HHHHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH------STTTTS
T ss_pred HHHHHhCCCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhc------CcccCC
Confidence 122222222111 111223456789999999999999999999976 566543
No 119
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=9.7e-40 Score=361.64 Aligned_cols=266 Identities=26% Similarity=0.421 Sum_probs=214.7
Q ss_pred hcCCCcCceecccCceEEEEEEEcC------CcEEEEEEecccccChHHHHHHHHHHHHHHcC-CCCCcceEEEEEEeCC
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELHD------GTKIAVKRMESAVVSEKGFAEFKSEIAVLTKV-RHRHLVGLLGYCLDGN 661 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~~------g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 661 (947)
.++|++.+.||+|+||.||+|.... +..||+|.+.... .....+.+.+|+++++++ +||||+++++++.+++
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 123 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA-HADEKEALMSELKIMSHLGQHENIVNLLGACTHGG 123 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc-ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence 4788999999999999999998752 2479999987653 445567899999999999 8999999999999999
Q ss_pred eeEEEEEecCCCchhhhhhccccc---------CCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCC
Q 002255 662 ERLLVYEYMPQGTLSRHLFNRKEE---------GLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD 732 (947)
Q Consensus 662 ~~~lV~e~~~~gsL~~~l~~~~~~---------~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~ 732 (947)
..++||||+++|+|.+++...... ....+++..++.++.||+.||+|||+ .+|+||||||+||+++.+
T Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~ 200 (333)
T 2i1m_A 124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNG 200 (333)
T ss_dssp SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGCEEEGG
T ss_pred ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCcccceEEECCC
Confidence 999999999999999998754321 12357899999999999999999997 799999999999999999
Q ss_pred CcEEEeecCcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCCccCccchhhHHH
Q 002255 733 MRAKVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDETQSEDSVHLVT 811 (947)
Q Consensus 733 ~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~l~~ 811 (947)
+.+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||++ |..||........
T Consensus 201 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~----- 275 (333)
T 2i1m_A 201 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK----- 275 (333)
T ss_dssp GEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHH-----
T ss_pred CeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHH-----
Confidence 9999999999986654433333444567889999999998899999999999999999999 9999976543221
Q ss_pred HHHHhhcChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 002255 812 WFRRMHINKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAEL 875 (947)
Q Consensus 812 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~ 875 (947)
+...+...... ..+......+.+++.+||+.||++||++.|+++.|+.+.+.
T Consensus 276 -----------~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 327 (333)
T 2i1m_A 276 -----------FYKLVKDGYQM-AQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 327 (333)
T ss_dssp -----------HHHHHHHTCCC-CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -----------HHHHHhcCCCC-CCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHh
Confidence 11122211110 11111235688999999999999999999999999987653
No 120
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=360.69 Aligned_cols=280 Identities=25% Similarity=0.388 Sum_probs=202.1
Q ss_pred hcCCCcCceecccCceEEEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHH--HHcCCCCCcceEEEEEEe-----CC
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAV--LTKVRHRHLVGLLGYCLD-----GN 661 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~l~~~~~~-----~~ 661 (947)
.++|++.+.||+|+||.||+|+. +++.||||++.... ...+..|.++ +..++||||+++++++.. ..
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~-----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 85 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN-----RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRM 85 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc-----hhhHHHHHHHHHHHhccCcchhhheecccccccCCCc
Confidence 36889999999999999999977 48999999986431 2334444444 445899999999986643 23
Q ss_pred eeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhcc------CCCeeecCCCCCcEEEcCCCcE
Q 002255 662 ERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLA------HQSFIHRDLKPSNILLGDDMRA 735 (947)
Q Consensus 662 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~------~~~ivHrDlkp~Nill~~~~~~ 735 (947)
..++||||+++|+|.+++... ..++..++.++.||+.||+|||+.. +.+|+||||||+|||++.++.+
T Consensus 86 ~~~lv~e~~~~g~L~~~l~~~------~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 159 (336)
T 3g2f_A 86 EYLLVMEYYPNGSLXKYLSLH------TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTC 159 (336)
T ss_dssp EEEEEECCCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCE
T ss_pred eEEEEEecCCCCcHHHHHhhc------ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcE
Confidence 568999999999999999553 2588899999999999999999721 1199999999999999999999
Q ss_pred EEeecCcceecCCCCC------cceeecccccccccCcccccc-------CCcCcccccccHHHHHHHHHhCCCCCCccC
Q 002255 736 KVADFGLVRLAPDNGK------HSIETRLAGTFGYLAPEYAVT-------GRVTTKVDVFSFGVILMELITGRKALDETQ 802 (947)
Q Consensus 736 kl~DfGla~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwSlGvil~elltg~~p~~~~~ 802 (947)
||+|||+++....... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 160 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~ 239 (336)
T 3g2f_A 160 VISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGE 239 (336)
T ss_dssp EECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTS
T ss_pred EEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCcc
Confidence 9999999987654221 112234579999999999876 456789999999999999999987775443
Q ss_pred ccchhh-HHHHHHHhhcChhhHHHHhhccC---CCCh---hcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 002255 803 SEDSVH-LVTWFRRMHINKDTFRKAIDRTI---DLDE---ETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAEL 875 (947)
Q Consensus 803 ~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~ 875 (947)
...... ..................+.... .... ........+.+++.+||+.||++|||++|+++.|+.+.+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~ 319 (336)
T 3g2f_A 240 SVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMI 319 (336)
T ss_dssp CCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred chhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHH
Confidence 222111 00000000001111112221111 1111 1123455789999999999999999999999999999988
Q ss_pred hCCCC
Q 002255 876 WKPAE 880 (947)
Q Consensus 876 ~~~~~ 880 (947)
|....
T Consensus 320 ~~~~~ 324 (336)
T 3g2f_A 320 WERNK 324 (336)
T ss_dssp CCC--
T ss_pred HHhcc
Confidence 87654
No 121
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-38 Score=352.80 Aligned_cols=269 Identities=24% Similarity=0.381 Sum_probs=205.7
Q ss_pred HHHHHHhcCCCcCceecccCceEEEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHHHHcC--CCCCcceEEEEEEeC
Q 002255 583 QVLRNVTNNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKV--RHRHLVGLLGYCLDG 660 (947)
Q Consensus 583 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~ 660 (947)
...+.+.++|++.+.||+|+||.||+|+.. |+.||||++... ....+..|.+++... +||||+++++++...
T Consensus 30 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~ 103 (337)
T 3mdy_A 30 LVQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT-----EEASWFRETEIYQTVLMRHENILGFIAADIKG 103 (337)
T ss_dssp HHHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG-----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEES
T ss_pred ccccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc-----ccchhhhHHHHHHHHhhcCCCeeeEEEEEccC
Confidence 344566789999999999999999999886 899999998643 223455566666655 899999999999887
Q ss_pred ----CeeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhcc-----CCCeeecCCCCCcEEEcC
Q 002255 661 ----NERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLA-----HQSFIHRDLKPSNILLGD 731 (947)
Q Consensus 661 ----~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~-----~~~ivHrDlkp~Nill~~ 731 (947)
...++||||+++|+|.+++... .+++..++.++.|++.||+|||+.. +.+|+||||||+||+++.
T Consensus 104 ~~~~~~~~lv~e~~~~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~ 177 (337)
T 3mdy_A 104 TGSWTQLYLITDYHENGSLYDYLKST------TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKK 177 (337)
T ss_dssp CGGGCEEEEEECCCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECT
T ss_pred CCCCCceEEEEeccCCCcHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECC
Confidence 7889999999999999999542 4889999999999999999999620 129999999999999999
Q ss_pred CCcEEEeecCcceecCCCCCcc--eeecccccccccCccccccCCcCcc------cccccHHHHHHHHHhC---------
Q 002255 732 DMRAKVADFGLVRLAPDNGKHS--IETRLAGTFGYLAPEYAVTGRVTTK------VDVFSFGVILMELITG--------- 794 (947)
Q Consensus 732 ~~~~kl~DfGla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~------~DvwSlGvil~elltg--------- 794 (947)
++.+||+|||+++......... ......||+.|+|||++.+...+.+ +|||||||++|||++|
T Consensus 178 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~ 257 (337)
T 3mdy_A 178 NGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEE 257 (337)
T ss_dssp TSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCC
T ss_pred CCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccc
Confidence 9999999999998765432221 1224579999999999987766655 9999999999999999
Q ss_pred -CCCCCccCccchhhHHHHHHHhhcChhhHHHHhh-ccCC--CC--hhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 002255 795 -RKALDETQSEDSVHLVTWFRRMHINKDTFRKAID-RTID--LD--EETLASISTVADLAGHCCAREPYQRPDMGHVVNV 868 (947)
Q Consensus 795 -~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~--~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 868 (947)
+.||......... .......+. .... .. .........+.+++.+||+.||++||++.||++.
T Consensus 258 ~~~p~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 325 (337)
T 3mdy_A 258 YQLPYHDLVPSDPS------------YEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKT 325 (337)
T ss_dssp CCCTTTTTSCSSCC------------HHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred ccccHhhhcCCCCc------------hhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence 5666543322211 011111111 1111 11 1122556678999999999999999999999999
Q ss_pred HHhhhhh
Q 002255 869 LSSLAEL 875 (947)
Q Consensus 869 L~~l~~~ 875 (947)
|+.+.+.
T Consensus 326 L~~l~~~ 332 (337)
T 3mdy_A 326 LAKMSES 332 (337)
T ss_dssp HHHHHHT
T ss_pred HHHHHhh
Confidence 9998753
No 122
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=2e-39 Score=362.23 Aligned_cols=253 Identities=21% Similarity=0.315 Sum_probs=194.7
Q ss_pred hcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVY 667 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 667 (947)
.++|++.+.||+|+||.||+|+.. +++.||||++..... ..+.+.+|+.++++++||||+++++++.+++..++||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 95 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA---IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIM 95 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT---SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc---ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEE
Confidence 368999999999999999999876 789999999976432 2356789999999999999999999999999999999
Q ss_pred EecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCc--EEEeecCccee
Q 002255 668 EYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR--AKVADFGLVRL 745 (947)
Q Consensus 668 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~--~kl~DfGla~~ 745 (947)
||+++|+|.+++.... .+++..+..++.|++.||+|||+ ++|+||||||+||+++.++. +||+|||+++.
T Consensus 96 e~~~~~~L~~~l~~~~-----~~~~~~~~~i~~ql~~~L~~LH~---~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~ 167 (361)
T 3uc3_A 96 EYASGGELYERICNAG-----RFSEDEARFFFQQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKS 167 (361)
T ss_dssp ECCCSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHH---TTCCSCCCCGGGEEECSSSSCCEEECCCCCC--
T ss_pred EeCCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCceEEEeecCcccc
Confidence 9999999999986532 48899999999999999999997 89999999999999987765 99999999875
Q ss_pred cCCCCCcceeecccccccccCccccccCCcCcc-cccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHH
Q 002255 746 APDNGKHSIETRLAGTFGYLAPEYAVTGRVTTK-VDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFR 824 (947)
Q Consensus 746 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 824 (947)
..... ......||+.|+|||++.+..++.+ +|||||||++|||++|+.||......... .....
T Consensus 168 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~------------~~~~~ 232 (361)
T 3uc3_A 168 SVLHS---QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDY------------RKTIQ 232 (361)
T ss_dssp ----------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCH------------HHHHH
T ss_pred ccccC---CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHH------------HHHHH
Confidence 43221 2234579999999999988887665 89999999999999999999765432221 11112
Q ss_pred HHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 002255 825 KAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNV 868 (947)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 868 (947)
.+.......... ......+.+|+.+||+.||++|||+.|+++.
T Consensus 233 ~~~~~~~~~~~~-~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 233 RILSVKYSIPDD-IRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp HHHTTCCCCCTT-SCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHhcCCCCCCCc-CCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 222222221111 1123567899999999999999999999874
No 123
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=5.5e-39 Score=351.97 Aligned_cols=267 Identities=22% Similarity=0.288 Sum_probs=203.0
Q ss_pred hcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVY 667 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 667 (947)
.++|++.+.||+|+||.||+|... +|+.||||++..........+.+.+|++++++++||||+++++++.+++..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 468999999999999999999876 5899999999776555566778899999999999999999999999999999999
Q ss_pred EecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceecC
Q 002255 668 EYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 747 (947)
Q Consensus 668 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~ 747 (947)
||+++++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 82 e~~~~~~l~~~~~~~-----~~~~~~~~~~i~~~l~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 153 (311)
T 4agu_A 82 EYCDHTVLHELDRYQ-----RGVPEHLVKSITWQTLQAVNFCHK---HNCIHRDVKPENILITKHSVIKLCDFGFARLLT 153 (311)
T ss_dssp ECCSEEHHHHHHHTS-----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EeCCCchHHHHHhhh-----cCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCChhhEEEcCCCCEEEeeCCCchhcc
Confidence 999999998887542 348899999999999999999997 899999999999999999999999999998765
Q ss_pred CCCCcceeecccccccccCcccccc-CCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHHH
Q 002255 748 DNGKHSIETRLAGTFGYLAPEYAVT-GRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKA 826 (947)
Q Consensus 748 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 826 (947)
.... ......||+.|+|||++.+ ..++.++||||||+++|||++|+.||......+.......... .........
T Consensus 154 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 229 (311)
T 4agu_A 154 GPSD--YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLG--DLIPRHQQV 229 (311)
T ss_dssp --------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHC--SCCHHHHHH
T ss_pred Cccc--ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhc--ccccccccc
Confidence 4322 2234578999999999876 5689999999999999999999999987654433222111100 000000111
Q ss_pred hhc-------cCCCC----h---hcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 827 IDR-------TIDLD----E---ETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 827 ~~~-------~~~~~----~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
... ..... . ........+.+++.+||+.||++|||++|+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 230 FSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp HHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred cccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 100 00000 0 00122345789999999999999999999976
No 124
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=2.8e-39 Score=349.29 Aligned_cols=255 Identities=27% Similarity=0.406 Sum_probs=200.9
Q ss_pred HhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEE
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLV 666 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 666 (947)
+.++|.+.+.||+|+||.||+|... +++.||+|++.... .....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 20 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 98 (285)
T 3is5_A 20 IDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR-SQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIV 98 (285)
T ss_dssp HHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG-CCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccc-cchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEE
Confidence 4578999999999999999999875 68899999987653 233457889999999999999999999999999999999
Q ss_pred EEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEE---cCCCcEEEeecCcc
Q 002255 667 YEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGLV 743 (947)
Q Consensus 667 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill---~~~~~~kl~DfGla 743 (947)
|||+++|+|.+++....... ..+++..+..++.|++.||+|||+ .+|+||||||+||++ +.++.+||+|||++
T Consensus 99 ~e~~~~~~L~~~l~~~~~~~-~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a 174 (285)
T 3is5_A 99 METCEGGELLERIVSAQARG-KALSEGYVAELMKQMMNALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLA 174 (285)
T ss_dssp ECCCSCCBHHHHHHHHHHHT-CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEESSSSTTCCEEECCCCCC
T ss_pred EEeCCCCcHHHHHHhhhhcc-cCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCCCHHHEEEecCCCCCCEEEEeeecc
Confidence 99999999999886543222 458999999999999999999997 899999999999999 45688999999999
Q ss_pred eecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhH
Q 002255 744 RLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTF 823 (947)
Q Consensus 744 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 823 (947)
+...... ......||+.|+|||++. +.++.++||||||+++|||++|+.||......+..
T Consensus 175 ~~~~~~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~---------------- 234 (285)
T 3is5_A 175 ELFKSDE---HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQ---------------- 234 (285)
T ss_dssp CC-------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----------------
T ss_pred eecCCcc---cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHH----------------
Confidence 8664432 223457999999999875 57899999999999999999999999765422111
Q ss_pred HHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 824 RKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
....................+.+++.+||+.||++||++.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 235 QKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp HHHHHCCCCCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred hhhccCCcccccccCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 01111111111111112356789999999999999999999976
No 125
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.1e-39 Score=354.68 Aligned_cols=259 Identities=26% Similarity=0.475 Sum_probs=203.7
Q ss_pred cCCCcCceecccCceEEEEEEEcC-----CcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeE
Q 002255 590 NNFSEENVLGRGGFGTVYKGELHD-----GTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERL 664 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~~-----g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 664 (947)
++|+..+.||+|+||.||+|.... +..||||+++... .......+.+|++++++++||||+++++++.+.+..+
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 122 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY-TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM 122 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence 567788999999999999997653 2459999997543 4555678999999999999999999999999999999
Q ss_pred EEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcce
Q 002255 665 LVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 744 (947)
Q Consensus 665 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~ 744 (947)
+||||+++|+|.+++.... ..+++.+++.++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 123 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 195 (333)
T 1mqb_A 123 IITEYMENGALDKFLREKD----GEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSR 195 (333)
T ss_dssp EEEECCTTEEHHHHHHHTT----TCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC--
T ss_pred EEEeCCCCCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChheEEECCCCcEEECCCCcch
Confidence 9999999999999986532 348899999999999999999997 799999999999999999999999999998
Q ss_pred ecCCCCCc-ceeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhcChhh
Q 002255 745 LAPDNGKH-SIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDETQSEDSVHLVTWFRRMHINKDT 822 (947)
Q Consensus 745 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 822 (947)
........ .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~---------------- 259 (333)
T 1mqb_A 196 VLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEV---------------- 259 (333)
T ss_dssp ---------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH----------------
T ss_pred hhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHH----------------
Confidence 76543221 11223456889999999998899999999999999999999 9999976542211
Q ss_pred HHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 002255 823 FRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAE 874 (947)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~ 874 (947)
...+.+. .. .+........+.+++.+||+.||++||++.++++.|+.+..
T Consensus 260 ~~~~~~~-~~-~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 309 (333)
T 1mqb_A 260 MKAINDG-FR-LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR 309 (333)
T ss_dssp HHHHHTT-CC-CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HHHHHCC-Cc-CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 1111111 11 01112234568899999999999999999999999998875
No 126
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.5e-39 Score=356.13 Aligned_cols=261 Identities=22% Similarity=0.364 Sum_probs=198.5
Q ss_pred HhcCCCcCceecccCceEEEEEEE-cCCcEEEEEEeccccc-ChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCe---
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGEL-HDGTKIAVKRMESAVV-SEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNE--- 662 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--- 662 (947)
+.++|++.+.||+|+||.||+|+. .+++.||||+++.... .......+.+|++++++++||||+++++++.....
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 89 (311)
T 3ork_A 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP 89 (311)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEE
T ss_pred ecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCc
Confidence 347899999999999999999987 4789999999976533 34456789999999999999999999999876543
Q ss_pred -eEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecC
Q 002255 663 -RLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 741 (947)
Q Consensus 663 -~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG 741 (947)
.++||||+++++|.+++... ..+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 90 ~~~lv~e~~~g~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg 161 (311)
T 3ork_A 90 LPYIVMEYVDGVTLRDIVHTE-----GPMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFG 161 (311)
T ss_dssp EEEEEEECCCEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEETTSCEEECCCS
T ss_pred ccEEEEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEcCCCCEEEeecc
Confidence 49999999999999998653 248899999999999999999997 899999999999999999999999999
Q ss_pred cceecCCCCCc-ceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcCh
Q 002255 742 LVRLAPDNGKH-SIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINK 820 (947)
Q Consensus 742 la~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~ 820 (947)
+++........ .......||+.|+|||++.+..++.++|||||||++|||++|+.||......+.
T Consensus 162 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~-------------- 227 (311)
T 3ork_A 162 IARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV-------------- 227 (311)
T ss_dssp CC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--------------
T ss_pred CcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH--------------
Confidence 99866543221 222345799999999999998999999999999999999999999976543211
Q ss_pred hhHHHHhhccCCCC-hhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH-HHHhh
Q 002255 821 DTFRKAIDRTIDLD-EETLASISTVADLAGHCCAREPYQRPDMGHVVN-VLSSL 872 (947)
Q Consensus 821 ~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~-~L~~l 872 (947)
....+....... .........+.+++.+||+.||++||++.++++ .+..+
T Consensus 228 --~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 228 --AYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp --HHHHHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred --HHHHhcCCCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 011111111100 001113356889999999999999997766554 44433
No 127
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=9.1e-40 Score=359.91 Aligned_cols=248 Identities=25% Similarity=0.388 Sum_probs=202.5
Q ss_pred hcCCCcCceecccCceEEEEEEE-cCCcEEEEEEecccccCh-HHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGEL-HDGTKIAVKRMESAVVSE-KGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLV 666 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 666 (947)
.++|.+.+.||+|+||.||+|.. .+|+.||||++....... .....+.+|+++++.++||||+++++++.+++..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 36899999999999999999987 478999999987542211 2235788999999999999999999999999999999
Q ss_pred EEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceec
Q 002255 667 YEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 746 (947)
Q Consensus 667 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~ 746 (947)
|||+ +|+|.+++... ..+++.++..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 88 ~E~~-~g~l~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~ 158 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEK-----KRMTEDEGRRFFQQIICAIEYCHR---HKIVHRDLKPENLLLDDNLNVKIADFGLSNIM 158 (336)
T ss_dssp ECCC-CEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCCSTTTEEECTTCCEEECCSSCTBTT
T ss_pred EECC-CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCchhhEEEcCCCCEEEEEeccceec
Confidence 9999 78999988653 248899999999999999999997 79999999999999999999999999999876
Q ss_pred CCCCCcceeecccccccccCccccccCCc-CcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHH
Q 002255 747 PDNGKHSIETRLAGTFGYLAPEYAVTGRV-TTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRK 825 (947)
Q Consensus 747 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 825 (947)
.... .....+||+.|+|||++.+..+ +.++|||||||++|||++|+.||.......... .
T Consensus 159 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~----------------~ 219 (336)
T 3h4j_B 159 TDGN---FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFK----------------K 219 (336)
T ss_dssp TTSB---TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBC----------------C
T ss_pred cCCc---ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHH----------------H
Confidence 5432 2234579999999999988776 689999999999999999999997654322110 0
Q ss_pred HhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 826 AIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
+.......+ ......+.+++.+||+.||.+|||+.|+++
T Consensus 220 i~~~~~~~p---~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 220 VNSCVYVMP---DFLSPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp CCSSCCCCC---TTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred HHcCCCCCc---ccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 001111111 112345789999999999999999999976
No 128
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=3.8e-39 Score=361.40 Aligned_cols=256 Identities=18% Similarity=0.200 Sum_probs=208.9
Q ss_pred hcCCCcCceecccCceEEEEEE------EcCCcEEEEEEecccccChHHHHHHHHHHHHHHcCC---CCCcceEEEEEEe
Q 002255 589 TNNFSEENVLGRGGFGTVYKGE------LHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVR---HRHLVGLLGYCLD 659 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~------~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~ 659 (947)
.++|.+.++||+|+||.||+|. ..+++.||||++... ...++..|++++++++ |+||+++++++..
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~ 138 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA-----NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF 138 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC-----CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC-----ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence 4678899999999999999993 456899999998754 2356788888888887 9999999999999
Q ss_pred CCeeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcC--------
Q 002255 660 GNERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD-------- 731 (947)
Q Consensus 660 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~-------- 731 (947)
++..++||||+++|+|.+++..........+++..++.++.||+.||+|||+ ++||||||||+|||++.
T Consensus 139 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~---~~ivHrDiKp~NIll~~~~~~~~~~ 215 (365)
T 3e7e_A 139 QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHD---CEIIHGDIKPDNFILGNGFLEQDDE 215 (365)
T ss_dssp SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECGGGTCC---
T ss_pred CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEecccccCcccc
Confidence 9999999999999999999976544444669999999999999999999996 89999999999999998
Q ss_pred ---CCcEEEeecCcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhh
Q 002255 732 ---DMRAKVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVH 808 (947)
Q Consensus 732 ---~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~ 808 (947)
++.+||+|||+|+..............+||+.|+|||++.+..++.++|||||||++|||++|+.||.........
T Consensus 216 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~- 294 (365)
T 3e7e_A 216 DDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECK- 294 (365)
T ss_dssp ---CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEE-
T ss_pred ccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCcee-
Confidence 8999999999998654333333445678999999999999999999999999999999999999999654321100
Q ss_pred HHHHHHHhhcChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCC-CCHHHHHHHHHhhhhh
Q 002255 809 LVTWFRRMHINKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQR-PDMGHVVNVLSSLAEL 875 (947)
Q Consensus 809 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R-Ps~~evl~~L~~l~~~ 875 (947)
+...+... .....+.+++..|++.+|.+| |+++++.+.|+++.+.
T Consensus 295 ------------------~~~~~~~~----~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 295 ------------------PEGLFRRL----PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340 (365)
T ss_dssp ------------------ECSCCTTC----SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred ------------------echhcccc----CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence 01111100 123456789999999999998 5788889888887654
No 129
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=2.8e-39 Score=354.94 Aligned_cols=265 Identities=25% Similarity=0.385 Sum_probs=192.0
Q ss_pred hcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVY 667 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 667 (947)
.++|++.+.||+|+||.||+|..+ +|+.||+|+++... .....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 82 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS-EEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVF 82 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCS-TTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccc-ccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEE
Confidence 367999999999999999999865 68999999997553 2233467889999999999999999999999999999999
Q ss_pred EecCCCchhhhhhccccc-CCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceec
Q 002255 668 EYMPQGTLSRHLFNRKEE-GLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 746 (947)
Q Consensus 668 e~~~~gsL~~~l~~~~~~-~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~ 746 (947)
||++ |+|.+++...... ....+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 83 e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 158 (317)
T 2pmi_A 83 EFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE---NKILHRDLKPQNLLINKRGQLKLGDFGLARAF 158 (317)
T ss_dssp ECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCSSCEET
T ss_pred EecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCChHHeEEcCCCCEEECcCccceec
Confidence 9997 6999988654321 22348899999999999999999997 89999999999999999999999999999876
Q ss_pred CCCCCcceeecccccccccCcccccc-CCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChh----
Q 002255 747 PDNGKHSIETRLAGTFGYLAPEYAVT-GRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKD---- 821 (947)
Q Consensus 747 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~---- 821 (947)
..... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+....+ .........
T Consensus 159 ~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i--~~~~~~~~~~~~~ 234 (317)
T 2pmi_A 159 GIPVN--TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLI--FDIMGTPNESLWP 234 (317)
T ss_dssp TSCCC--CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH--HHHHCSCCTTTCG
T ss_pred CCCcc--cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH--HHHhCCCChhHhh
Confidence 53221 2234578999999999876 46899999999999999999999999876543322111 111100000
Q ss_pred ------------------hHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 822 ------------------TFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 822 ------------------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
.+.+.+.+... ......+.+++.+||+.||++|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 235 SVTKLPKYNPNIQQRPPRDLRQVLQPHTK-----EPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp GGGGCTTCCTTCCCCCCCCSHHHHGGGCS-----SCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhhhhhcccccccccchhHHHhhccccc-----ccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 00111111000 012346889999999999999999999876
No 130
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=9.7e-39 Score=343.54 Aligned_cols=255 Identities=23% Similarity=0.346 Sum_probs=206.8
Q ss_pred HhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEE
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLV 666 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 666 (947)
..++|++.+.||+|+||.||+|... +++.||||++.... .....+.+.+|+.+++.++||||+++++++.+++..++|
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 83 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGG-CTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeecc-chhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEE
Confidence 4578999999999999999999876 68999999987543 233457889999999999999999999999999999999
Q ss_pred EEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceec
Q 002255 667 YEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 746 (947)
Q Consensus 667 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~ 746 (947)
|||+++++|.+++... ..+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++...
T Consensus 84 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 155 (276)
T 2yex_A 84 LEYCSGGELFDRIEPD-----IGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVF 155 (276)
T ss_dssp EECCTTEEGGGGSBTT-----TBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEecCCCcHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCChHHEEEccCCCEEEeeCCCcccc
Confidence 9999999999988542 348899999999999999999997 89999999999999999999999999999866
Q ss_pred CCCCCcceeecccccccccCccccccCCc-CcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHH
Q 002255 747 PDNGKHSIETRLAGTFGYLAPEYAVTGRV-TTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRK 825 (947)
Q Consensus 747 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 825 (947)
.............||+.|+|||++.+..+ +.++||||||+++|||++|+.||........ .. ..
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~--------------~~ 220 (276)
T 2yex_A 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-EY--------------SD 220 (276)
T ss_dssp EETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH-HH--------------HH
T ss_pred CCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH-HH--------------HH
Confidence 44332223345679999999999987665 7899999999999999999999976543221 11 11
Q ss_pred HhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 826 AIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
....... ..........+.+++.+||+.||++||++.|+++
T Consensus 221 ~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 221 WKEKKTY-LNPWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp HHTTCTT-STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hhhcccc-cCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 1111111 0111122346789999999999999999999876
No 131
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.4e-39 Score=355.20 Aligned_cols=270 Identities=23% Similarity=0.408 Sum_probs=208.5
Q ss_pred cCCCcCceecccCceEEEEEEE-----cCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeC--Ce
Q 002255 590 NNFSEENVLGRGGFGTVYKGEL-----HDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDG--NE 662 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~ 662 (947)
++|++.+.||+|+||.||+|++ .+++.||||++.... .....+.+.+|++++++++||||+++++++.+. ..
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 99 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 99 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce
Confidence 5688899999999999999984 368999999997553 334457889999999999999999999999876 66
Q ss_pred eEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCc
Q 002255 663 RLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGL 742 (947)
Q Consensus 663 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGl 742 (947)
.++||||+++|+|.+++.... ..+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 100 ~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~ 172 (302)
T 4e5w_A 100 IKLIMEFLPSGSLKEYLPKNK----NKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGL 172 (302)
T ss_dssp EEEEEECCTTCBHHHHHHHHT----TTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTT
T ss_pred EEEEEEeCCCCcHHHHHHhcc----ccCCHHHHHHHHHHHHHHHHHhhc---CCcccCCCchheEEEcCCCCEEECcccc
Confidence 899999999999999985533 348899999999999999999997 8999999999999999999999999999
Q ss_pred ceecCCCCCc-ceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcC--
Q 002255 743 VRLAPDNGKH-SIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHIN-- 819 (947)
Q Consensus 743 a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~-- 819 (947)
++........ .......||..|+|||++.+..++.++||||||+++|||++|+.|+...... ... .......
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~-~~~~~~~~~ 247 (302)
T 4e5w_A 173 TKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMAL----FLK-MIGPTHGQM 247 (302)
T ss_dssp CEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH----HHH-HHCSCCGGG
T ss_pred cccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhH----Hhh-ccCCccccc
Confidence 9877654322 2234457888999999999999999999999999999999999987532110 000 0000000
Q ss_pred -hhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 002255 820 -KDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLA 873 (947)
Q Consensus 820 -~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~ 873 (947)
.......+..... ..........+.+++.+||+.||.+||++.++++.|+++.
T Consensus 248 ~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 248 TVTRLVNTLKEGKR-LPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHHHHHHHHHTTCC-CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHhccCC-CCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 0111112221111 1111223456889999999999999999999999999875
No 132
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1.1e-38 Score=343.39 Aligned_cols=251 Identities=24% Similarity=0.364 Sum_probs=206.0
Q ss_pred HHhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEE
Q 002255 587 NVTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLL 665 (947)
Q Consensus 587 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 665 (947)
.+.++|++.+.||+|+||.||+|..+ ++..||+|++..... ...+.+.+|++++++++||||+++++++.+++..++
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (277)
T 3f3z_A 6 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV--EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYL 83 (277)
T ss_dssp CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC--SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc--chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEE
Confidence 35678999999999999999999876 477899999876532 335688999999999999999999999999999999
Q ss_pred EEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEE---cCCCcEEEeecCc
Q 002255 666 VYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGL 742 (947)
Q Consensus 666 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill---~~~~~~kl~DfGl 742 (947)
||||+++++|.+++... ..+++.++..++.|++.||+|||+ .+|+||||||+||++ +.++.+||+|||+
T Consensus 84 v~e~~~~~~L~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~ 155 (277)
T 3f3z_A 84 VMELCTGGELFERVVHK-----RVFRESDAARIMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGL 155 (277)
T ss_dssp EEECCCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTT
T ss_pred EEeccCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEecCCCCCcEEEEeccc
Confidence 99999999999988653 348899999999999999999997 899999999999999 7889999999999
Q ss_pred ceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhh
Q 002255 743 VRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDT 822 (947)
Q Consensus 743 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 822 (947)
+....... ......||+.|+|||++.+ .++.++||||||+++|||++|+.||......+ .
T Consensus 156 ~~~~~~~~---~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----------------~ 215 (277)
T 3f3z_A 156 AARFKPGK---MMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSE----------------V 215 (277)
T ss_dssp CEECCTTS---CBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH----------------H
T ss_pred ceeccCcc---chhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHH----------------H
Confidence 98765432 2234579999999998765 59999999999999999999999997654221 1
Q ss_pred HHHHhhccCCCChhc-HHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 823 FRKAIDRTIDLDEET-LASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 823 ~~~~~~~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
...+........... ......+.+++.+|++.||++||++.++++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 216 MLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp HHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred HHHHHhCCCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 112222222222111 123356889999999999999999999976
No 133
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=1.1e-38 Score=351.12 Aligned_cols=253 Identities=24% Similarity=0.356 Sum_probs=207.8
Q ss_pred HhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccCh----HHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCe
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSE----KGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNE 662 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 662 (947)
+.++|++.+.||+|+||.||+|..+ +|+.||||++....... ...+++.+|+.++++++||||+++++++.+++.
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 89 (321)
T 2a2a_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTD 89 (321)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred hhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE
Confidence 4567999999999999999999876 68999999997653222 135789999999999999999999999999999
Q ss_pred eEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCC----cEEEe
Q 002255 663 RLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM----RAKVA 738 (947)
Q Consensus 663 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~----~~kl~ 738 (947)
.++||||+++++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++ .+||+
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~lH~---~~ivH~dikp~NIl~~~~~~~~~~~kl~ 161 (321)
T 2a2a_A 90 VVLILELVSGGELFDFLAQK-----ESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLI 161 (321)
T ss_dssp EEEEECCCCSCBHHHHHHTC-----SCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEEC
T ss_pred EEEEEEcCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChHHEEEecCCCCcCCEEEc
Confidence 99999999999999998643 348999999999999999999997 8999999999999999888 79999
Q ss_pred ecCcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhc
Q 002255 739 DFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHI 818 (947)
Q Consensus 739 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~ 818 (947)
|||+++....... .....||+.|+|||++.+..++.++||||||+++|||++|+.||......+.
T Consensus 162 Dfg~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~------------ 226 (321)
T 2a2a_A 162 DFGLAHEIEDGVE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET------------ 226 (321)
T ss_dssp CCTTCEECCTTCC---CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH------------
T ss_pred cCccceecCcccc---ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHH------------
Confidence 9999987755322 2345799999999999988999999999999999999999999976542211
Q ss_pred ChhhHHHHhhccCCCChhc-HHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 819 NKDTFRKAIDRTIDLDEET-LASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
+..+.......+... ......+.+++.+||+.||++||++.|+++
T Consensus 227 ----~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 227 ----LANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp ----HHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred ----HHHHHhcccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 111111111111111 122345789999999999999999999977
No 134
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=7.5e-39 Score=367.93 Aligned_cols=248 Identities=28% Similarity=0.443 Sum_probs=206.6
Q ss_pred cCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccC-hHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEE
Q 002255 590 NNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVS-EKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVY 667 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 667 (947)
++|.+.+.||+|+||.||+|+.. +|+.||||++...... ....+.+.+|+.+++.++||||+++++++...+..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 67899999999999999999876 7999999999754321 123567899999999999999999999999999999999
Q ss_pred EecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceecC
Q 002255 668 EYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 747 (947)
Q Consensus 668 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~ 747 (947)
||+++|+|.+++... ..+++.++..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 96 E~~~gg~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~ 167 (476)
T 2y94_A 96 EYVSGGELFDYICKN-----GRLDEKESRRLFQQILSGVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 167 (476)
T ss_dssp ECCSSEEHHHHTTSS-----SSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred eCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCCcccccHHHEEEecCCCeEEEeccchhhcc
Confidence 999999999998542 348999999999999999999996 899999999999999999999999999998775
Q ss_pred CCCCcceeecccccccccCccccccCCc-CcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHHH
Q 002255 748 DNGKHSIETRLAGTFGYLAPEYAVTGRV-TTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKA 826 (947)
Q Consensus 748 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 826 (947)
... .....+||+.|+|||++.+..+ +.++|||||||++|||++|+.||.+.... ..+..+
T Consensus 168 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~----------------~~~~~i 228 (476)
T 2y94_A 168 DGE---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP----------------TLFKKI 228 (476)
T ss_dssp TTC---CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH----------------HHHHHH
T ss_pred ccc---cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH----------------HHHHHH
Confidence 432 2234579999999999987765 68999999999999999999999765422 112223
Q ss_pred hhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 827 IDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 827 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
.+.....+. .....+.+++.+||+.||++|||+.|+++
T Consensus 229 ~~~~~~~p~---~~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 229 CDGIFYTPQ---YLNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp HTTCCCCCT---TCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hcCCcCCCc---cCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 333222221 12345789999999999999999999987
No 135
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=2.8e-39 Score=361.18 Aligned_cols=250 Identities=25% Similarity=0.375 Sum_probs=196.4
Q ss_pred cCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccC-hHHHHHHHHHHHH-HHcCCCCCcceEEEEEEeCCeeEEE
Q 002255 590 NNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVS-EKGFAEFKSEIAV-LTKVRHRHLVGLLGYCLDGNERLLV 666 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lV 666 (947)
++|++.++||+|+||.||+|+.+ +++.||||++++.... ......+.+|..+ ++.++|||||++++++.+.+..|+|
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv 117 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence 67899999999999999999876 5889999999766432 3344567777776 5778999999999999999999999
Q ss_pred EEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceec
Q 002255 667 YEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 746 (947)
Q Consensus 667 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~ 746 (947)
|||+++|+|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++..
T Consensus 118 ~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~ikL~DFG~a~~~ 189 (373)
T 2r5t_A 118 LDYINGGELFYHLQRE-----RCFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKEN 189 (373)
T ss_dssp EECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCBCGGG
T ss_pred EeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEeeCcccccc
Confidence 9999999999998653 247888899999999999999997 89999999999999999999999999999864
Q ss_pred CCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHHH
Q 002255 747 PDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKA 826 (947)
Q Consensus 747 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 826 (947)
..... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||...... +.+..+
T Consensus 190 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~----------------~~~~~i 251 (373)
T 2r5t_A 190 IEHNS--TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA----------------EMYDNI 251 (373)
T ss_dssp BCCCC--CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHH----------------HHHHHH
T ss_pred ccCCC--ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH----------------HHHHHH
Confidence 33221 234568999999999999999999999999999999999999999764422 122333
Q ss_pred hhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 002255 827 IDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNV 868 (947)
Q Consensus 827 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 868 (947)
+...+..... ....+.+++.+||+.||++||++.+.++.
T Consensus 252 ~~~~~~~~~~---~~~~~~~li~~lL~~dp~~R~~~~~~~~~ 290 (373)
T 2r5t_A 252 LNKPLQLKPN---ITNSARHLLEGLLQKDRTKRLGAKDDFME 290 (373)
T ss_dssp HHSCCCCCSS---SCHHHHHHHHHHTCSSGGGSTTTTTTHHH
T ss_pred HhcccCCCCC---CCHHHHHHHHHHcccCHHhCCCCCCCHHH
Confidence 3333332221 23457899999999999999998654443
No 136
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=5.5e-39 Score=346.44 Aligned_cols=258 Identities=24% Similarity=0.397 Sum_probs=205.6
Q ss_pred hcCCCcCceecccCceEEEEEEEcC----CcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELHD----GTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERL 664 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 664 (947)
.++|.+.+.||+|+||.||+|.+.. +..||+|++.... .....+.+.+|+.++++++||||+++++++.+ +..+
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~ 88 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC-TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTW 88 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS-CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc-CchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCE
Confidence 4678899999999999999998643 3469999987653 44556889999999999999999999999865 4568
Q ss_pred EEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcce
Q 002255 665 LVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 744 (947)
Q Consensus 665 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~ 744 (947)
+||||+++++|.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++
T Consensus 89 ~v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 161 (281)
T 3cc6_A 89 IIMELYPYGELGHYLERNK----NSLKVLTLVLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSR 161 (281)
T ss_dssp EEEECCTTCBHHHHHHHHT----TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEEETTEEEECCCCGGG
T ss_pred EEEecCCCCCHHHHHHhcc----ccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEECCCCcEEeCccCCCc
Confidence 9999999999999996532 348899999999999999999997 899999999999999999999999999998
Q ss_pred ecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhcChhhH
Q 002255 745 LAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDETQSEDSVHLVTWFRRMHINKDTF 823 (947)
Q Consensus 745 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 823 (947)
....... .......+|+.|+|||++.+..++.++||||||+++|||++ |+.||......+.. ..
T Consensus 162 ~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~---~~----------- 226 (281)
T 3cc6_A 162 YIEDEDY-YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI---GV----------- 226 (281)
T ss_dssp CC----------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHH---HH-----------
T ss_pred ccccccc-cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHH---HH-----------
Confidence 6654322 12234567889999999988899999999999999999998 99999765433211 11
Q ss_pred HHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 002255 824 RKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAE 874 (947)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~ 874 (947)
+..... ..........+.+++.+|++.||++||++.|+++.|+.+.+
T Consensus 227 ---~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 273 (281)
T 3cc6_A 227 ---LEKGDR-LPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQ 273 (281)
T ss_dssp ---HHHTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---HhcCCC-CCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence 111000 00111223558899999999999999999999999998864
No 137
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=5.1e-39 Score=356.75 Aligned_cols=249 Identities=27% Similarity=0.420 Sum_probs=202.1
Q ss_pred hcCCCcCceecccCceEEEEEEE-cCCcEEEEEEeccccc-ChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGEL-HDGTKIAVKRMESAVV-SEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLV 666 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 666 (947)
.+.|+..+.||+|+||.||+|+. .+|+.||||++..... .....+++.+|++++++++||||+++++++.+++..++|
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 45688999999999999999986 4789999999976532 234457899999999999999999999999999999999
Q ss_pred EEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceec
Q 002255 667 YEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 746 (947)
Q Consensus 667 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~ 746 (947)
|||+. |+|.+++.... ..+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 133 ~e~~~-g~l~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 204 (348)
T 1u5q_A 133 MEYCL-GSASDLLEVHK----KPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIM 204 (348)
T ss_dssp EECCS-EEHHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEECCCTTCBSS
T ss_pred EecCC-CCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEeeccCceec
Confidence 99996 68888775432 358999999999999999999997 79999999999999999999999999999865
Q ss_pred CCCCCcceeecccccccccCccccc---cCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhH
Q 002255 747 PDNGKHSIETRLAGTFGYLAPEYAV---TGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTF 823 (947)
Q Consensus 747 ~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 823 (947)
... ....||+.|+|||++. ...++.++|||||||++|||++|+.||......+. +
T Consensus 205 ~~~------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~----------------~ 262 (348)
T 1u5q_A 205 APA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA----------------L 262 (348)
T ss_dssp SSB------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH----------------H
T ss_pred CCC------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH----------------H
Confidence 432 2357999999999884 56789999999999999999999999976542211 1
Q ss_pred HHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 002255 824 RKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNV 868 (947)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 868 (947)
..+...... ..........+.+++.+||+.||++||++.++++.
T Consensus 263 ~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 263 YHIAQNESP-ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp HHHHHSCCC-CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred HHHHhcCCC-CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 111111110 00111223457899999999999999999999774
No 138
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.6e-39 Score=361.07 Aligned_cols=261 Identities=29% Similarity=0.439 Sum_probs=198.1
Q ss_pred CCCcCceecccCceEEEEEEEc--CC--cEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEe-CCeeEE
Q 002255 591 NFSEENVLGRGGFGTVYKGELH--DG--TKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLD-GNERLL 665 (947)
Q Consensus 591 ~~~~~~~lg~G~~g~Vy~~~~~--~g--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~l 665 (947)
.|+..++||+|+||.||+|.+. ++ ..||||.++.. ......+++.+|+.++++++||||+++++++.+ ++..++
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~l 168 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 168 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSC-SCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEE
Confidence 4667789999999999999764 22 36899988653 244567889999999999999999999998764 457899
Q ss_pred EEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCccee
Q 002255 666 VYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 745 (947)
Q Consensus 666 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~ 745 (947)
||||+++|+|.+++.... ..+++.+++.++.||++||+|||+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 169 v~e~~~~g~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 241 (373)
T 3c1x_A 169 VLPYMKHGDLRNFIRNET----HNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARD 241 (373)
T ss_dssp EEECCTTCBHHHHHHCTT----CCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred EEECCCCCCHHHHHhhcc----cCCCHHHHHHHHHHHHHHHHHHHH---CCEecCccchheEEECCCCCEEEeecccccc
Confidence 999999999999996532 347899999999999999999997 8999999999999999999999999999986
Q ss_pred cCCCCCc--ceeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhcChhh
Q 002255 746 APDNGKH--SIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDETQSEDSVHLVTWFRRMHINKDT 822 (947)
Q Consensus 746 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 822 (947)
....... .......+|+.|+|||++.+..++.++|||||||++|||++ |.+||......+...
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~-------------- 307 (373)
T 3c1x_A 242 MYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV-------------- 307 (373)
T ss_dssp ----------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHH--------------
T ss_pred ccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHH--------------
Confidence 6443211 12234567889999999999999999999999999999999 677776554332111
Q ss_pred HHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhC
Q 002255 823 FRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAELWK 877 (947)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~~~ 877 (947)
.+...... ..+......+.+++.+||+.||++||++.|+++.|+.+...+.
T Consensus 308 --~~~~~~~~--~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~ 358 (373)
T 3c1x_A 308 --YLLQGRRL--LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 358 (373)
T ss_dssp --HHHTTCCC--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred --HHHcCCCC--CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcc
Confidence 11111110 0111223568899999999999999999999999999886554
No 139
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.6e-39 Score=381.74 Aligned_cols=257 Identities=31% Similarity=0.515 Sum_probs=209.6
Q ss_pred hcCCCcCceecccCceEEEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEEE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVYE 668 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 668 (947)
.++|++.++||+|+||.||+|.++++..||||+++.... ..++|.+|+++|++++|||||++++++.+ +..++|||
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e 341 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 341 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC---CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeee
Confidence 467888999999999999999998888999999986532 24678999999999999999999999876 67899999
Q ss_pred ecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceecCC
Q 002255 669 YMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPD 748 (947)
Q Consensus 669 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~ 748 (947)
|+++|+|.+++..... ..+++.+++.++.||+.||+|||+ ++||||||||+|||+++++.+||+|||+++....
T Consensus 342 ~~~~gsL~~~l~~~~~---~~l~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 415 (535)
T 2h8h_A 342 YMSKGSLLDFLKGETG---KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIED 415 (535)
T ss_dssp CCTTEEHHHHHSHHHH---TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCC
T ss_pred hhcCCcHHHHHhhcCC---CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEEcCCCcEEEcccccceecCC
Confidence 9999999999965322 347899999999999999999997 8999999999999999999999999999986643
Q ss_pred CCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhcChhhHHHHh
Q 002255 749 NGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDETQSEDSVHLVTWFRRMHINKDTFRKAI 827 (947)
Q Consensus 749 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 827 (947)
.. ........++..|+|||++....++.++|||||||++|||++ |+.||.+....+. .+.+
T Consensus 416 ~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~-----------------~~~i 477 (535)
T 2h8h_A 416 NE-YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV-----------------LDQV 477 (535)
T ss_dssp HH-HHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHH-----------------HHHH
T ss_pred Cc-eecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH-----------------HHHH
Confidence 21 112223457789999999998999999999999999999999 9999976542211 1111
Q ss_pred hccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 002255 828 DRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAE 874 (947)
Q Consensus 828 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~ 874 (947)
...... .........+.+|+.+||+.||++||++.+|++.|+.+..
T Consensus 478 ~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~ 523 (535)
T 2h8h_A 478 ERGYRM-PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 523 (535)
T ss_dssp HTTCCC-CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred HcCCCC-CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence 111111 1111234568899999999999999999999999998754
No 140
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=9.2e-39 Score=361.59 Aligned_cols=252 Identities=21% Similarity=0.289 Sum_probs=193.5
Q ss_pred hcCCCcC-ceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHc-CCCCCcceEEEEEEe----CC
Q 002255 589 TNNFSEE-NVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTK-VRHRHLVGLLGYCLD----GN 661 (947)
Q Consensus 589 ~~~~~~~-~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~----~~ 661 (947)
.++|.+. ++||+|+||.||+|..+ +|+.||||++... ..+.+|+.++.+ .+||||+++++++.. +.
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~ 132 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAGRK 132 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCc
Confidence 3566665 78999999999999875 6899999998642 356778888744 589999999999875 56
Q ss_pred eeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcC---CCcEEEe
Q 002255 662 ERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD---DMRAKVA 738 (947)
Q Consensus 662 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~---~~~~kl~ 738 (947)
..|+||||+++|+|.+++..+.. ..+++.++..++.||+.||+|||+ .+|+||||||+|||++. ++.+||+
T Consensus 133 ~~~lv~E~~~gg~L~~~l~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~~~kl~ 206 (400)
T 1nxk_A 133 CLLIVMECLDGGELFSRIQDRGD---QAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLT 206 (400)
T ss_dssp EEEEEEECCCSEEHHHHHHCC------CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSTTCCEEEC
T ss_pred EEEEEEEeCCCCcHHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCcceEEEecCCCCccEEEE
Confidence 78999999999999999965432 358999999999999999999997 89999999999999997 7899999
Q ss_pred ecCcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhc
Q 002255 739 DFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHI 818 (947)
Q Consensus 739 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~ 818 (947)
|||+++...... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||.........
T Consensus 207 DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~----------- 272 (400)
T 1nxk_A 207 DFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS----------- 272 (400)
T ss_dssp CCTTCEECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSC-----------
T ss_pred ecccccccCCCC---ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCcccccc-----------
Confidence 999998764422 223467999999999999999999999999999999999999999765432211
Q ss_pred ChhhHHHHhhccCCCChhc-HHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 002255 819 NKDTFRKAIDRTIDLDEET-LASISTVADLAGHCCAREPYQRPDMGHVVNV 868 (947)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 868 (947)
......+....+...... .....++.+|+.+||+.||++||++.|+++.
T Consensus 273 -~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 273 -PGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp -CSHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -HHHHHHHHcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 011112222222211111 1233568899999999999999999999874
No 141
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=3.6e-39 Score=356.02 Aligned_cols=273 Identities=26% Similarity=0.377 Sum_probs=212.6
Q ss_pred cCCCcCceecccCceEEEEEEE-----cCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEE--eCCe
Q 002255 590 NNFSEENVLGRGGFGTVYKGEL-----HDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCL--DGNE 662 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~ 662 (947)
++|++.+.||+|+||.||+|++ .+++.||||++... .....+.+.+|++++++++||||+++++++. +...
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 100 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS--GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQS 100 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC--CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCce
Confidence 6788999999999999999985 36889999999765 4555678999999999999999999999987 4567
Q ss_pred eEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCc
Q 002255 663 RLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGL 742 (947)
Q Consensus 663 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGl 742 (947)
.++||||+++++|.+++.... ..+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 173 (327)
T 3lxl_A 101 LRLVMEYLPSGCLRDFLQRHR----ARLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADFGL 173 (327)
T ss_dssp EEEEEECCTTCBHHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCGGG
T ss_pred EEEEEeecCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChhhEEECCCCCEEEccccc
Confidence 899999999999999996543 248999999999999999999997 8999999999999999999999999999
Q ss_pred ceecCCCCCcc-eeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChh
Q 002255 743 VRLAPDNGKHS-IETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKD 821 (947)
Q Consensus 743 a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~ 821 (947)
++......... ......||+.|+|||++.+..++.++||||||+++|||++|+.||.......... ..+... .....
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~-~~~~~~-~~~~~ 251 (327)
T 3lxl_A 174 AKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRM-MGCERD-VPALS 251 (327)
T ss_dssp CEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHH-CC-----CCHHH
T ss_pred ceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhh-cccccc-cccHH
Confidence 98775543322 2234568889999999998899999999999999999999999986543211000 000000 00001
Q ss_pred hHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 002255 822 TFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAE 874 (947)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~ 874 (947)
...+.+..... ..........+.+++.+||+.||++||++.|+++.|+.+..
T Consensus 252 ~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 303 (327)
T 3lxl_A 252 RLLELLEEGQR-LPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS 303 (327)
T ss_dssp HHHHHHHTTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC--
T ss_pred HHHHHhhcccC-CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 12222222221 11122334568899999999999999999999999998754
No 142
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=5.4e-39 Score=354.28 Aligned_cols=261 Identities=25% Similarity=0.350 Sum_probs=209.0
Q ss_pred HHHHHHHhcCCCcC-ceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCC-CCCcceEEEEEE
Q 002255 582 IQVLRNVTNNFSEE-NVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVR-HRHLVGLLGYCL 658 (947)
Q Consensus 582 ~~~~~~~~~~~~~~-~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~ 658 (947)
++..+.+.++|.+. +.||+|+||.||+|... +|+.||+|++............+.+|+.+++++. ||||+++++++.
T Consensus 20 ~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~ 99 (327)
T 3lm5_A 20 FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYE 99 (327)
T ss_dssp SBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEE
T ss_pred HHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEE
Confidence 34456677888887 89999999999999876 6899999999876555555678999999999994 699999999999
Q ss_pred eCCeeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcC---CCcE
Q 002255 659 DGNERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD---DMRA 735 (947)
Q Consensus 659 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~---~~~~ 735 (947)
+++..++||||+++|+|.+++.... ...+++.++..++.|++.||+|||+ .+|+||||||+||+++. ++.+
T Consensus 100 ~~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~i~~ql~~~L~~LH~---~givH~Dikp~NIl~~~~~~~~~~ 173 (327)
T 3lm5_A 100 NTSEIILILEYAAGGEIFSLCLPEL---AEMVSENDVIRLIKQILEGVYYLHQ---NNIVHLDLKPQNILLSSIYPLGDI 173 (327)
T ss_dssp CSSEEEEEEECCTTEEGGGGGSSCC----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESCBTTBCCE
T ss_pred eCCeEEEEEEecCCCcHHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCChHHEEEecCCCCCcE
Confidence 9999999999999999999885432 2458999999999999999999997 89999999999999998 7899
Q ss_pred EEeecCcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHH
Q 002255 736 KVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRR 815 (947)
Q Consensus 736 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~ 815 (947)
||+|||+++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+.
T Consensus 174 kL~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~--------- 241 (327)
T 3lm5_A 174 KIVDFGMSRKIGHACE---LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQET--------- 241 (327)
T ss_dssp EECCGGGCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---------
T ss_pred EEeeCccccccCCccc---cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH---------
Confidence 9999999987654322 2345799999999999989999999999999999999999999976543211
Q ss_pred hhcChhhHHHHhhccCCCC-hhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 816 MHINKDTFRKAIDRTIDLD-EETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
...+........ .........+.+++.+||+.||++||++.|+++
T Consensus 242 -------~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 242 -------YLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp -------HHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred -------HHHHHhcccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 111111111111 111223356789999999999999999999865
No 143
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=7.2e-39 Score=348.70 Aligned_cols=262 Identities=29% Similarity=0.435 Sum_probs=205.6
Q ss_pred cCCCcCceecccCceEEEEEEEcC----CcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEE-eCCeeE
Q 002255 590 NNFSEENVLGRGGFGTVYKGELHD----GTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCL-DGNERL 664 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~ 664 (947)
.+|++.++||+|+||.||+|...+ +..||+|.+... ......+.+.+|+.++++++||||+++++++. .++..+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTC-CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccC-CCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 467888999999999999998642 235899998753 24556678999999999999999999999865 456789
Q ss_pred EEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcce
Q 002255 665 LVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 744 (947)
Q Consensus 665 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~ 744 (947)
+||||+++|+|.+++.... ..+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 104 ~v~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~ql~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~ 176 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRNET----HNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLAR 176 (298)
T ss_dssp EEEECCTTCBHHHHHHCTT----CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSCGGGC
T ss_pred EEEeCCCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEECCCCCEEECcccccc
Confidence 9999999999999996532 347899999999999999999997 899999999999999999999999999998
Q ss_pred ecCCCCCc--ceeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhcChh
Q 002255 745 LAPDNGKH--SIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDETQSEDSVHLVTWFRRMHINKD 821 (947)
Q Consensus 745 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~ 821 (947)
........ .......||+.|+|||.+.+..++.++||||||+++|||++ |.+||......+..
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~-------------- 242 (298)
T 3f66_A 177 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-------------- 242 (298)
T ss_dssp CCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHH--------------
T ss_pred cccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHH--------------
Confidence 66443211 12334567889999999998899999999999999999999 55566544322211
Q ss_pred hHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhC
Q 002255 822 TFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAELWK 877 (947)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~~~ 877 (947)
.......... ........+.+++.+|++.||++||++.|+++.|+++...+.
T Consensus 243 --~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~ 294 (298)
T 3f66_A 243 --VYLLQGRRLL--QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 294 (298)
T ss_dssp --HHHHTTCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred --HHHhcCCCCC--CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 1111111110 111123468899999999999999999999999999876443
No 144
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.7e-39 Score=381.68 Aligned_cols=261 Identities=22% Similarity=0.367 Sum_probs=204.7
Q ss_pred CCcCc-eecccCceEEEEEEEc---CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEE
Q 002255 592 FSEEN-VLGRGGFGTVYKGELH---DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVY 667 (947)
Q Consensus 592 ~~~~~-~lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 667 (947)
+.+.+ .||+|+||.||+|.++ ++..||||+++... .....+++.+|++++++++|||||++++++.. +..++||
T Consensus 337 ~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~ 414 (613)
T 2ozo_A 337 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVM 414 (613)
T ss_dssp EEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCC-SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEE
T ss_pred eeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEE
Confidence 33334 7999999999999774 46679999997652 33456789999999999999999999999976 5689999
Q ss_pred EecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceecC
Q 002255 668 EYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 747 (947)
Q Consensus 668 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~ 747 (947)
||+++|+|.+++.... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++...
T Consensus 415 E~~~~g~L~~~l~~~~----~~l~~~~~~~i~~qi~~~L~~LH~---~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~ 487 (613)
T 2ozo_A 415 EMAGGGPLHKFLVGKR----EEIPVSNVAELLHQVSMGMKYLEE---KNFVHRNLAARNVLLVNRHYAKISDFGLSKALG 487 (613)
T ss_dssp ECCTTCBHHHHHTTCT----TTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC
T ss_pred EeCCCCcHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCcCCHHHEEEcCCCcEEEeeccCccccc
Confidence 9999999999986532 458999999999999999999997 899999999999999999999999999998764
Q ss_pred CCCCc-ceeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhcChhhHHH
Q 002255 748 DNGKH-SIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDETQSEDSVHLVTWFRRMHINKDTFRK 825 (947)
Q Consensus 748 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 825 (947)
..... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+. .+
T Consensus 488 ~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~-----------------~~ 550 (613)
T 2ozo_A 488 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV-----------------MA 550 (613)
T ss_dssp --------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHH-----------------HH
T ss_pred CCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH-----------------HH
Confidence 43221 11222346789999999998999999999999999999998 9999986543221 11
Q ss_pred HhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhCCC
Q 002255 826 AIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAELWKPA 879 (947)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~~~~~ 879 (947)
.+..... ...+......+.+++.+||+.||++||++.+|++.|+.+.......
T Consensus 551 ~i~~~~~-~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~~ 603 (613)
T 2ozo_A 551 FIEQGKR-MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASK 603 (613)
T ss_dssp HHHTTCC-CCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSCS
T ss_pred HHHcCCC-CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhccc
Confidence 1111111 1111223456889999999999999999999999999987655443
No 145
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.4e-39 Score=361.21 Aligned_cols=276 Identities=14% Similarity=0.205 Sum_probs=212.7
Q ss_pred hcCCCcCceecccCceEEEEEEEcC---------CcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcce-------
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELHD---------GTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVG------- 652 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~~---------g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~------- 652 (947)
.++|++.+.||+|+||.||+|+... ++.||||++... +.+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-------~~~~~E~~~l~~l~h~niv~~~~~~~~ 113 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-------GRLFNEQNFFQRAAKPLQVNKWKKLYS 113 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-------STHHHHHHHHHHHCCHHHHHHHHHHTT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-------chHHHHHHHHHHhcccchhhhhhhhcc
Confidence 3678999999999999999998763 789999998754 36788999999999999987
Q ss_pred --------EEEEEEe-CCeeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCC
Q 002255 653 --------LLGYCLD-GNERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLK 723 (947)
Q Consensus 653 --------l~~~~~~-~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlk 723 (947)
+++++.. +...++||||+ +++|.+++..... ..+++.+++.++.||+.||+|||+ .+|+|||||
T Consensus 114 ~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~---~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dik 186 (352)
T 2jii_A 114 TPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPK---HVLSERSVLQVACRLLDALEFLHE---NEYVHGNVT 186 (352)
T ss_dssp CTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGG---GCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCC
T ss_pred CCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCc---CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCC
Confidence 6777776 77889999999 9999999976422 348999999999999999999997 799999999
Q ss_pred CCcEEEcCCC--cEEEeecCcceecCCCCCc-----ceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCC
Q 002255 724 PSNILLGDDM--RAKVADFGLVRLAPDNGKH-----SIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRK 796 (947)
Q Consensus 724 p~Nill~~~~--~~kl~DfGla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~ 796 (947)
|+||+++.++ .+||+|||+++........ .......||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus 187 p~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~ 266 (352)
T 2jii_A 187 AENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFL 266 (352)
T ss_dssp GGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCC
Confidence 9999999998 9999999999866432211 11234579999999999999899999999999999999999999
Q ss_pred CCCccCccchhhHHHHHHHhhcChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhh
Q 002255 797 ALDETQSEDSVHLVTWFRRMHINKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAELW 876 (947)
Q Consensus 797 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~~ 876 (947)
||........ ......... ....................+.+++.+||+.||++||++.++++.|+.+.+..
T Consensus 267 pf~~~~~~~~-~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 338 (352)
T 2jii_A 267 PWTNCLPNTE-DIMKQKQKF-------VDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDL 338 (352)
T ss_dssp TTGGGTTCHH-HHHHHHHHH-------HHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred CcccCCcCHH-HHHHHHHhc-------cCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhc
Confidence 9987542221 111111100 00000000000000012356889999999999999999999999999998877
Q ss_pred CCCCCCCCCc
Q 002255 877 KPAEPDSDDI 886 (947)
Q Consensus 877 ~~~~~~~~~~ 886 (947)
........+|
T Consensus 339 ~~~~~~~~dw 348 (352)
T 2jii_A 339 RVSPYDPIGL 348 (352)
T ss_dssp TCCTTSCCCC
T ss_pred CCCcCccccC
Confidence 6555555444
No 146
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=8.9e-39 Score=357.94 Aligned_cols=267 Identities=22% Similarity=0.294 Sum_probs=207.5
Q ss_pred HHHHhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCC-----CCCcceEEEEEE
Q 002255 585 LRNVTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVR-----HRHLVGLLGYCL 658 (947)
Q Consensus 585 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~l~~~~~ 658 (947)
...+.++|++.++||+|+||.||+|+.. +++.||||+++.. ......+..|+.+++.++ ||||+++++++.
T Consensus 30 g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~ 106 (360)
T 3llt_A 30 GMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI---KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFM 106 (360)
T ss_dssp TCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEE
T ss_pred ceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc---hhhhhhhHHHHHHHHHhcccCCCCCCeecccceee
Confidence 3345689999999999999999999874 6899999998742 445567888999999996 999999999999
Q ss_pred eCCeeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcC-------
Q 002255 659 DGNERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD------- 731 (947)
Q Consensus 659 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~------- 731 (947)
..+..++||||+ +++|.+++..... ..+++.++..++.||+.||+|||+ .+|+||||||+|||++.
T Consensus 107 ~~~~~~lv~e~~-~~~L~~~~~~~~~---~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~~~ 179 (360)
T 3llt_A 107 YYDHMCLIFEPL-GPSLYEIITRNNY---NGFHIEDIKLYCIEILKALNYLRK---MSLTHTDLKPENILLDDPYFEKSL 179 (360)
T ss_dssp ETTEEEEEECCC-CCBHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCTTCCEEE
T ss_pred ECCeeEEEEcCC-CCCHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCcccEEEccccccccc
Confidence 999999999999 9999999965432 348899999999999999999997 89999999999999975
Q ss_pred ------------------CCcEEEeecCcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHh
Q 002255 732 ------------------DMRAKVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT 793 (947)
Q Consensus 732 ------------------~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt 793 (947)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~ 254 (360)
T 3llt_A 180 ITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY-----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYT 254 (360)
T ss_dssp EEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC-----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHH
T ss_pred cchhcccccccccccccCCCCEEEEeccCceecCCC-----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHH
Confidence 789999999999875442 234579999999999999999999999999999999999
Q ss_pred CCCCCCccCccchhhHHHHHHHhhcChhhHHHHhhcc-------------C---------------CCChhcHHHHHHHH
Q 002255 794 GRKALDETQSEDSVHLVTWFRRMHINKDTFRKAIDRT-------------I---------------DLDEETLASISTVA 845 (947)
Q Consensus 794 g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-------------~---------------~~~~~~~~~~~~l~ 845 (947)
|+.||......+....+..... .............. . ............+.
T Consensus 255 g~~pf~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 333 (360)
T 3llt_A 255 GSLLFRTHEHMEHLAMMESIIQ-PIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFC 333 (360)
T ss_dssp SSCSCCCSSHHHHHHHHHHHTC-CCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHH
T ss_pred CCCCCCCCcHHHHHHHHHHhcC-CCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHH
Confidence 9999987554332222211100 00011111111000 0 00000111124577
Q ss_pred HHHHHhcccCCCCCCCHHHHHH
Q 002255 846 DLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 846 ~li~~cl~~dP~~RPs~~evl~ 867 (947)
+|+.+||+.||++|||++|+++
T Consensus 334 ~li~~~L~~dP~~Rpta~elL~ 355 (360)
T 3llt_A 334 DFLYSILQIDPTLRPSPAELLK 355 (360)
T ss_dssp HHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHHHHHhcCChhhCCCHHHHhc
Confidence 9999999999999999999875
No 147
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1e-38 Score=343.14 Aligned_cols=247 Identities=26% Similarity=0.407 Sum_probs=181.8
Q ss_pred cCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccC-hHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEE
Q 002255 590 NNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVS-EKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVY 667 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 667 (947)
++|++.+.||+|+||.||+|... +|+.||+|++...... ....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 68999999999999999999864 6899999999765432 333567899999999999999999999999999999999
Q ss_pred EecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceecC
Q 002255 668 EYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 747 (947)
Q Consensus 668 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~ 747 (947)
||+ +++|.+++... ..+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 93 e~~-~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 163 (275)
T 2eue_A 93 EYA-GNELFDYIVQR-----DKMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT 163 (275)
T ss_dssp ECC-CEEHHHHHHTS-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCSSCC----
T ss_pred hhc-CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCeeccCChHhEEECCCCCEEEeecccceecc
Confidence 999 77888887543 348899999999999999999997 799999999999999999999999999998664
Q ss_pred CCCCcceeecccccccccCccccccCCc-CcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHHH
Q 002255 748 DNGKHSIETRLAGTFGYLAPEYAVTGRV-TTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKA 826 (947)
Q Consensus 748 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 826 (947)
... ......||+.|+|||++.+..+ +.++||||||+++|||++|+.||....... ....+
T Consensus 164 ~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----------------~~~~~ 224 (275)
T 2eue_A 164 DGN---FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV----------------LFKNI 224 (275)
T ss_dssp --------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHH----------------HHHHH
T ss_pred Ccc---cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH----------------HHHHH
Confidence 432 1234569999999999987765 789999999999999999999997644211 11111
Q ss_pred hhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 827 IDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 827 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
......... .....+.+++.+||+.||++|||+.|+++
T Consensus 225 ~~~~~~~~~---~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 225 SNGVYTLPK---FLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp HHTCCCCCT---TSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HhCCCCCCc---cCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 222222111 12345789999999999999999999976
No 148
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=5.2e-39 Score=353.68 Aligned_cols=255 Identities=24% Similarity=0.348 Sum_probs=184.7
Q ss_pred CceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCC-CCCcceEEEEEEeCCeeEEEEEecCC
Q 002255 595 ENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVR-HRHLVGLLGYCLDGNERLLVYEYMPQ 672 (947)
Q Consensus 595 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~~~~ 672 (947)
.+.||+|+||.||+|..+ +|+.||||++... ....+.+|+.+++.+. ||||+++++++.++...++||||+++
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 90 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-----MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNG 90 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-----GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh-----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCC
Confidence 478999999999999875 6899999998643 3457788999999997 99999999999999999999999999
Q ss_pred CchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCC---cEEEeecCcceecCCC
Q 002255 673 GTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM---RAKVADFGLVRLAPDN 749 (947)
Q Consensus 673 gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~---~~kl~DfGla~~~~~~ 749 (947)
|+|.+++... ..+++.++..++.||+.||+|||+ .+|+||||||+||+++.++ .+||+|||+++.....
T Consensus 91 ~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 162 (325)
T 3kn6_A 91 GELFERIKKK-----KHFSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD 162 (325)
T ss_dssp CBHHHHHHHC-----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-
T ss_pred CcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCeecCCCHHHEEEecCCCcccEEEeccccceecCCC
Confidence 9999999653 348999999999999999999997 8999999999999998765 8999999999876543
Q ss_pred CCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHHHhhc
Q 002255 750 GKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKAIDR 829 (947)
Q Consensus 750 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 829 (947)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||............ .+....+...
T Consensus 163 ~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~---------~~~~~~i~~~ 231 (325)
T 3kn6_A 163 NQ--PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSA---------VEIMKKIKKG 231 (325)
T ss_dssp -----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCH---------HHHHHHHTTT
T ss_pred CC--cccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccH---------HHHHHHHHcC
Confidence 22 223457899999999999999999999999999999999999999765432110000 1112222333
Q ss_pred cCCCChhc-HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhCCC
Q 002255 830 TIDLDEET-LASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAELWKPA 879 (947)
Q Consensus 830 ~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~~~~~ 879 (947)
........ .....++.+|+.+||+.||++||++.|+++ +.|...
T Consensus 232 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~------h~w~~~ 276 (325)
T 3kn6_A 232 DFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY------NEWLQD 276 (325)
T ss_dssp CCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT------CGGGCT
T ss_pred CCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc------Chhhcc
Confidence 33322222 223456889999999999999999999864 566543
No 149
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.9e-38 Score=343.98 Aligned_cols=248 Identities=24% Similarity=0.381 Sum_probs=201.7
Q ss_pred CCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEe----CCeeEE
Q 002255 591 NFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLD----GNERLL 665 (947)
Q Consensus 591 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~l 665 (947)
.|.+.+.||+|+||.||+|... ++..||+|++..........+.+.+|+.++++++||||+++++++.. +...++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 4677889999999999999875 68899999998776677778899999999999999999999999875 456899
Q ss_pred EEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCC--eeecCCCCCcEEEc-CCCcEEEeecCc
Q 002255 666 VYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQS--FIHRDLKPSNILLG-DDMRAKVADFGL 742 (947)
Q Consensus 666 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~--ivHrDlkp~Nill~-~~~~~kl~DfGl 742 (947)
||||+++++|.+++... ..+++..+..++.|++.||+|||+ .+ |+||||||+||+++ .++.+||+|||+
T Consensus 107 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~ 178 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGL 178 (290)
T ss_dssp EEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEEECCTTG
T ss_pred EEEecCCCCHHHHHHHc-----cCCCHHHHHHHHHHHHHHHHHHHc---CCCCEEECCCCHHHEEEECCCCCEEEeeCCC
Confidence 99999999999999653 347899999999999999999997 56 99999999999998 789999999999
Q ss_pred ceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhh
Q 002255 743 VRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDT 822 (947)
Q Consensus 743 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 822 (947)
+...... ......||+.|+|||++. +.++.++||||||+++|+|++|+.||........
T Consensus 179 ~~~~~~~----~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~---------------- 237 (290)
T 1t4h_A 179 ATLKRAS----FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ---------------- 237 (290)
T ss_dssp GGGCCTT----SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH----------------
T ss_pred ccccccc----ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHH----------------
Confidence 9755432 223457999999999876 5699999999999999999999999976443211
Q ss_pred HHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 823 FRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
....+................+.+++.+||+.||++||++.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 238 IYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp HHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHhccCCccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 111111111111112222356889999999999999999999976
No 150
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=9e-39 Score=355.34 Aligned_cols=267 Identities=17% Similarity=0.207 Sum_probs=199.9
Q ss_pred hcCCCcCceecccCceEEEEEEEc----CCcEEEEEEecccccCh---------HHHHHHHHHHHHHHcCCCCCcceEEE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELH----DGTKIAVKRMESAVVSE---------KGFAEFKSEIAVLTKVRHRHLVGLLG 655 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~---------~~~~~~~~E~~~l~~l~h~niv~l~~ 655 (947)
.++|.+.+.||+|+||.||+|... ++..||||++....... .....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 367899999999999999999875 57889999987542111 01134678899999999999999999
Q ss_pred EEEe----CCeeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcC
Q 002255 656 YCLD----GNERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD 731 (947)
Q Consensus 656 ~~~~----~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~ 731 (947)
++.. +...++||||+ +++|.+++.... .+++.+++.++.||+.||+|||+ .+|+||||||+||+++.
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~ 186 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG-----TFKKSTVLQLGIRMLDVLEYIHE---NEYVHGDIKAANLLLGY 186 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG-----BCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEES
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCcCHHHEEEcc
Confidence 9988 77889999999 999999986533 58999999999999999999997 79999999999999998
Q ss_pred CC--cEEEeecCcceecCCCCCc-----ceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCcc
Q 002255 732 DM--RAKVADFGLVRLAPDNGKH-----SIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSE 804 (947)
Q Consensus 732 ~~--~~kl~DfGla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~ 804 (947)
++ .+||+|||+++........ .......||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 187 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~ 266 (345)
T 2v62_A 187 KNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKD 266 (345)
T ss_dssp SSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTC
T ss_pred CCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccc
Confidence 87 9999999999876432211 1113457999999999999889999999999999999999999999653322
Q ss_pred chhhHHHHHHHh-hcChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 002255 805 DSVHLVTWFRRM-HINKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLA 873 (947)
Q Consensus 805 ~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~ 873 (947)
..... ...... ............. ......+.+++.+||+.||++||++.+|++.|+.+.
T Consensus 267 ~~~~~-~~~~~~~~~~~~~~~~~~~~--------~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 327 (345)
T 2v62_A 267 PVAVQ-TAKTNLLDELPQSVLKWAPS--------GSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG 327 (345)
T ss_dssp HHHHH-HHHHHHHHTTTHHHHHHSCT--------TSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred cHHHH-HHHHhhcccccHHHHhhccc--------cccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence 21111 111000 0001111111000 012346889999999999999999999999998754
No 151
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=5.3e-39 Score=354.65 Aligned_cols=264 Identities=25% Similarity=0.415 Sum_probs=207.4
Q ss_pred hcCCCcCceecccCceEEEEEEE------cCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCe
Q 002255 589 TNNFSEENVLGRGGFGTVYKGEL------HDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNE 662 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 662 (947)
.++|++.+.||+|+||.||+|++ .+++.||||++... .......++.+|+.++++++||||+++++++.+++.
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 107 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV-CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 107 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccc-cchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence 46899999999999999999973 35778999999644 245566789999999999999999999999999999
Q ss_pred eEEEEEecCCCchhhhhhccccc--CCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcC---CCcEEE
Q 002255 663 RLLVYEYMPQGTLSRHLFNRKEE--GLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD---DMRAKV 737 (947)
Q Consensus 663 ~~lV~e~~~~gsL~~~l~~~~~~--~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~---~~~~kl 737 (947)
.++||||+++++|.+++...... ....+++.+++.++.||+.||+|||+ .+|+||||||+||+++. +..+||
T Consensus 108 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~i~H~dlkp~NIli~~~~~~~~~kl 184 (327)
T 2yfx_A 108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKI 184 (327)
T ss_dssp CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeecCcCCHhHEEEecCCCcceEEE
Confidence 99999999999999999764321 12348899999999999999999997 89999999999999984 456999
Q ss_pred eecCcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHh
Q 002255 738 ADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDETQSEDSVHLVTWFRRM 816 (947)
Q Consensus 738 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~l~~~~~~~ 816 (947)
+|||+++...............||+.|+|||++.+..++.++||||||+++|||++ |+.||......+ ..
T Consensus 185 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~~------ 255 (327)
T 2yfx_A 185 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE---VL------ 255 (327)
T ss_dssp CCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH---HH------
T ss_pred CccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHH---HH------
Confidence 99999875543332223334568999999999988899999999999999999998 999997643221 11
Q ss_pred hcChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 002255 817 HINKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAE 874 (947)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~ 874 (947)
+.+..... ..........+.+++.+||+.||++||++.++++.|+.+..
T Consensus 256 --------~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~ 304 (327)
T 2yfx_A 256 --------EFVTSGGR-MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 304 (327)
T ss_dssp --------HHHHTTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --------HHHhcCCC-CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence 11111100 01111223568899999999999999999999999998865
No 152
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=2.8e-38 Score=351.35 Aligned_cols=270 Identities=22% Similarity=0.371 Sum_probs=212.3
Q ss_pred HHHHHHHhcCCCcCceecccCceEEEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHHHHc--CCCCCcceEEEEEEe
Q 002255 582 IQVLRNVTNNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTK--VRHRHLVGLLGYCLD 659 (947)
Q Consensus 582 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~ 659 (947)
+...+.+.++|++.+.||+|+||.||+|+.. |+.||||++... ....+.+|++++.. ++||||+++++++..
T Consensus 34 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~ 107 (342)
T 1b6c_B 34 LLVQRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNK 107 (342)
T ss_dssp HHHHHHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGG-----GHHHHHHHHHHHHHSCCCCTTBCCEEEEEEC
T ss_pred eeecccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCch-----hHHHHHHHHHHHHHhhcCCCcEEEEEeeecc
Confidence 3445667789999999999999999999885 899999998643 34567889999888 789999999999988
Q ss_pred CC----eeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhcc-----CCCeeecCCCCCcEEEc
Q 002255 660 GN----ERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLA-----HQSFIHRDLKPSNILLG 730 (947)
Q Consensus 660 ~~----~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~-----~~~ivHrDlkp~Nill~ 730 (947)
.. ..++||||+++|+|.+++... .+++.+++.++.|++.||+|||+.. ..+|+||||||+||+++
T Consensus 108 ~~~~~~~~~lv~e~~~~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~ 181 (342)
T 1b6c_B 108 DNGTWTQLWLVSDYHEHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK 181 (342)
T ss_dssp CCSSCCCEEEEECCCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEEC
T ss_pred cCCccceeEEEEeecCCCcHHHHHhcc------CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEEC
Confidence 76 789999999999999999542 3889999999999999999999210 27999999999999999
Q ss_pred CCCcEEEeecCcceecCCCCCcc--eeecccccccccCccccccC------CcCcccccccHHHHHHHHHhC--------
Q 002255 731 DDMRAKVADFGLVRLAPDNGKHS--IETRLAGTFGYLAPEYAVTG------RVTTKVDVFSFGVILMELITG-------- 794 (947)
Q Consensus 731 ~~~~~kl~DfGla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlGvil~elltg-------- 794 (947)
.++.+||+|||+++......... ......||+.|+|||++.+. .++.++|||||||++|||++|
T Consensus 182 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~ 261 (342)
T 1b6c_B 182 KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHE 261 (342)
T ss_dssp TTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCC
T ss_pred CCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCccc
Confidence 99999999999998765433221 22345799999999998765 344789999999999999999
Q ss_pred --CCCCCccCccchhhHHHHHHHhhcChhhHHH-HhhccCCC--Ch--hcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 795 --RKALDETQSEDSVHLVTWFRRMHINKDTFRK-AIDRTIDL--DE--ETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 795 --~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~--~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
+.||......+.. . ..+.+ ........ .. ........+.+++.+||+.||++||++.||++
T Consensus 262 ~~~~p~~~~~~~~~~-~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~ 329 (342)
T 1b6c_B 262 DYQLPYYDLVPSDPS-V-----------EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 329 (342)
T ss_dssp CCCCTTTTTSCSSCC-H-----------HHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred ccccCccccCcCccc-H-----------HHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 6777654332111 0 11111 11221111 11 12345567889999999999999999999999
Q ss_pred HHHhhhhh
Q 002255 868 VLSSLAEL 875 (947)
Q Consensus 868 ~L~~l~~~ 875 (947)
.|+.+.+.
T Consensus 330 ~L~~i~~~ 337 (342)
T 1b6c_B 330 TLSQLSQQ 337 (342)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
Confidence 99998764
No 153
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=7.8e-39 Score=381.90 Aligned_cols=252 Identities=25% Similarity=0.375 Sum_probs=202.6
Q ss_pred ceecccCceEEEEEEEc---CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEEEecCC
Q 002255 596 NVLGRGGFGTVYKGELH---DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVYEYMPQ 672 (947)
Q Consensus 596 ~~lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 672 (947)
+.||+|+||.||+|.+. .++.||||+++.........+++.+|++++++++|||||++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 57999999999999653 46789999998765566667889999999999999999999999964 568899999999
Q ss_pred CchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceecCCCCCc
Q 002255 673 GTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPDNGKH 752 (947)
Q Consensus 673 gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~ 752 (947)
|+|.+++... ..+++.++..++.||+.||+|||+ ++||||||||+|||++.++.+||+|||+++........
T Consensus 454 g~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~yLH~---~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 525 (635)
T 4fl3_A 454 GPLNKYLQQN-----RHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 525 (635)
T ss_dssp EEHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----
T ss_pred CCHHHHHhhC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccc
Confidence 9999999643 348899999999999999999997 89999999999999999999999999999876543321
Q ss_pred -ceeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhcChhhHHHHhhcc
Q 002255 753 -SIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDETQSEDSVHLVTWFRRMHINKDTFRKAIDRT 830 (947)
Q Consensus 753 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 830 (947)
.......||+.|+|||++.+..++.++|||||||++|||++ |+.||.+....+ ....+...
T Consensus 526 ~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~-----------------~~~~i~~~ 588 (635)
T 4fl3_A 526 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE-----------------VTAMLEKG 588 (635)
T ss_dssp ---------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-----------------HHHHHHTT
T ss_pred cccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-----------------HHHHHHcC
Confidence 22333457889999999999999999999999999999998 999997654322 11112111
Q ss_pred CCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 002255 831 IDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAE 874 (947)
Q Consensus 831 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~ 874 (947)
.. ...+......+.+++.+||+.||++||++.+|++.|+++..
T Consensus 589 ~~-~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 589 ER-MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp CC-CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CC-CCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 11 11112234568899999999999999999999999998764
No 154
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.1e-38 Score=348.78 Aligned_cols=261 Identities=21% Similarity=0.298 Sum_probs=201.6
Q ss_pred HhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEeccccc-ChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEE
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVV-SEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLL 665 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 665 (947)
..++|++.+.||+|+||.||+|... +++.||+|++..... .....+.+.+|+.++++++||||+++++++..++..++
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYV 111 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence 3578999999999999999999875 688999999976532 33445789999999999999999999999999999999
Q ss_pred EEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCccee
Q 002255 666 VYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 745 (947)
Q Consensus 666 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~ 745 (947)
||||+++++|.+++... ..+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 112 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~ 183 (309)
T 2h34_A 112 DMRLINGVDLAAMLRRQ-----GPLAPPRAVAIVRQIGSALDAAHA---AGATHRDVKPENILVSADDFAYLVDFGIASA 183 (309)
T ss_dssp EEECCCCEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSCCC---
T ss_pred EEEecCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CcCCcCCCChHHEEEcCCCCEEEecCccCcc
Confidence 99999999999998653 348899999999999999999997 7999999999999999999999999999876
Q ss_pred cCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHH
Q 002255 746 APDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRK 825 (947)
Q Consensus 746 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 825 (947)
...... .......||+.|+|||++.+..++.++||||||+++|||++|+.||...... . ...
T Consensus 184 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~--------------~~~ 245 (309)
T 2h34_A 184 TTDEKL-TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS---V--------------MGA 245 (309)
T ss_dssp --------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH---H--------------HHH
T ss_pred cccccc-ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH---H--------------HHH
Confidence 644321 1223457999999999999889999999999999999999999999754321 0 111
Q ss_pred HhhccCCC-ChhcHHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHHhhhh
Q 002255 826 AIDRTIDL-DEETLASISTVADLAGHCCAREPYQRP-DMGHVVNVLSSLAE 874 (947)
Q Consensus 826 ~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~l~~ 874 (947)
.+...... ..........+.+++.+||+.||++|| ++.++++.|+.+..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~ 296 (309)
T 2h34_A 246 HINQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALA 296 (309)
T ss_dssp HHHSCCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC
T ss_pred HhccCCCCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHH
Confidence 11111110 011112234578999999999999999 99999999987653
No 155
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=3.9e-39 Score=371.00 Aligned_cols=251 Identities=26% Similarity=0.389 Sum_probs=197.4
Q ss_pred hcCCCcCceecccCceEEEEEEEc-CCcEEEEEEeccccc-ChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVV-SEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLV 666 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 666 (947)
.++|++.++||+|+||.||+|... +|+.||||++..... .......+.+|++++++++||||+++++++.+.+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 467999999999999999999875 689999999976432 334456788999999999999999999999999999999
Q ss_pred EEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceec
Q 002255 667 YEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 746 (947)
Q Consensus 667 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~ 746 (947)
|||+++|+|.+++... ..+++..+..++.||+.||+|||+ .++|+||||||+|||++.++.+||+|||+++..
T Consensus 227 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~--~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 299 (446)
T 4ejn_A 227 MEYANGGELFFHLSRE-----RVFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEG 299 (446)
T ss_dssp ECCCSSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHH--HTCCCCCCCCGGGEEECSSSCEEECCCCCCCTT
T ss_pred EeeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHhh--cCCEEECCCCHHHEEECCCCCEEEccCCCceec
Confidence 9999999999988653 348899999999999999999995 278999999999999999999999999999864
Q ss_pred CCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHHH
Q 002255 747 PDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKA 826 (947)
Q Consensus 747 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 826 (947)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....+
T Consensus 300 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~----------------~~~~i 361 (446)
T 4ejn_A 300 IKDGA--TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK----------------LFELI 361 (446)
T ss_dssp CC-------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----------------HHHHH
T ss_pred cCCCc--ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH----------------HHHHH
Confidence 33221 2344689999999999999999999999999999999999999997654321 11222
Q ss_pred hhccCCCChhcHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q 002255 827 IDRTIDLDEETLASISTVADLAGHCCAREPYQRP-----DMGHVVN 867 (947)
Q Consensus 827 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 867 (947)
......++. .....+.+|+.+||+.||++|| ++.|+++
T Consensus 362 ~~~~~~~p~---~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 362 LMEEIRFPR---TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp HHCCCCCCT---TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred HhCCCCCCc---cCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 222222221 1235678999999999999999 9998866
No 156
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=7.1e-39 Score=372.46 Aligned_cols=255 Identities=27% Similarity=0.408 Sum_probs=207.8
Q ss_pred hcCCCcCceecccCceEEEEEEEc-CCcEEEEEEeccccc-ChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVV-SEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLV 666 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 666 (947)
.++|+..++||+|+||.||+|+.+ +|+.||||++..... .......+.+|++++++++|||||++++++.+++..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 467999999999999999999875 699999999975432 223346788999999999999999999999999999999
Q ss_pred EEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceec
Q 002255 667 YEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 746 (947)
Q Consensus 667 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~ 746 (947)
|||+++|+|.+++..... ..+++..+..++.||+.||+|||+ .+||||||||+|||++.++.+||+|||+++..
T Consensus 263 mEy~~gg~L~~~l~~~~~---~~l~e~~~~~i~~qIl~aL~yLH~---~gIvHrDLKPeNILld~~g~vKL~DFGla~~~ 336 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQ---AGFPEARAVFYAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHV 336 (576)
T ss_dssp ECCCCSCBHHHHHHSSSS---CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEcCCCCcHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCchheEEEeCCCCeEEEecccceec
Confidence 999999999999865432 348999999999999999999997 79999999999999999999999999999877
Q ss_pred CCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHHH
Q 002255 747 PDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKA 826 (947)
Q Consensus 747 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 826 (947)
..... ....+||+.|+|||++.+..++.++|||||||++|||++|+.||........... ....+
T Consensus 337 ~~~~~---~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~------------i~~~i 401 (576)
T 2acx_A 337 PEGQT---IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREE------------VERLV 401 (576)
T ss_dssp CTTCC---EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHH------------HHHHH
T ss_pred ccCcc---ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHH------------HHHHh
Confidence 54322 2345899999999999998999999999999999999999999986543221110 01111
Q ss_pred hhccCCCChhcHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q 002255 827 IDRTIDLDEETLASISTVADLAGHCCAREPYQRP-----DMGHVVN 867 (947)
Q Consensus 827 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 867 (947)
........ ......+.+|+.+||+.||++|| ++.||++
T Consensus 402 ~~~~~~~p---~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 402 KEVPEEYS---ERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp HHCCCCCC---TTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred hcccccCC---ccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 11111111 12235678999999999999999 6788875
No 157
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=4.4e-39 Score=348.78 Aligned_cols=252 Identities=24% Similarity=0.395 Sum_probs=202.1
Q ss_pred hcCCCcCceecccCceEEEEEEEc-CC-------cEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeC
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELH-DG-------TKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDG 660 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g-------~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 660 (947)
.++|.+.+.||+|+||.||+|... ++ ..||+|++... .....+.+.+|++++++++||||+++++++.++
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 84 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA--HRNYSESFFEAASMMSKLSHKHLVLNYGVCVCG 84 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGG--GGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCT
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccc--cHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeC
Confidence 467889999999999999999765 23 47999998654 344567899999999999999999999999999
Q ss_pred CeeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCc------
Q 002255 661 NERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR------ 734 (947)
Q Consensus 661 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~------ 734 (947)
+..++||||+++|+|.+++.... ..+++..+..++.||+.||+|||+ ++|+||||||+||+++.++.
T Consensus 85 ~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~ 157 (289)
T 4fvq_A 85 DENILVQEFVKFGSLDTYLKKNK----NCINILWKLEVAKQLAAAMHFLEE---NTLIHGNVCAKNILLIREEDRKTGNP 157 (289)
T ss_dssp TCCEEEEECCTTCBHHHHHHHTG----GGCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEEECCBGGGTBC
T ss_pred CCCEEEEECCCCCCHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHhh---CCeECCCcCcceEEEecCCccccccc
Confidence 99999999999999999996543 238899999999999999999997 89999999999999998887
Q ss_pred --EEEeecCcceecCCCCCcceeecccccccccCcccccc-CCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHH
Q 002255 735 --AKVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVT-GRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVT 811 (947)
Q Consensus 735 --~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~ 811 (947)
+||+|||+++..... ....||+.|+|||++.+ ..++.++|||||||++|||++|..|+........
T Consensus 158 ~~~kl~Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~----- 226 (289)
T 4fvq_A 158 PFIKLSDPGISITVLPK------DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQR----- 226 (289)
T ss_dssp CEEEECCCCSCTTTSCH------HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH-----
T ss_pred ceeeeccCcccccccCc------cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHH-----
Confidence 999999998654331 23468899999999987 6789999999999999999996554433221110
Q ss_pred HHHHhhcChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 002255 812 WFRRMHINKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAE 874 (947)
Q Consensus 812 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~ 874 (947)
............. .....+.+++.+||+.||++||++.|+++.|+++..
T Consensus 227 -----------~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~ 275 (289)
T 4fvq_A 227 -----------KLQFYEDRHQLPA---PKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT 275 (289)
T ss_dssp -----------HHHHHHTTCCCCC---CSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred -----------HHHHhhccCCCCC---CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 0011111111111 112347899999999999999999999999998764
No 158
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-38 Score=346.55 Aligned_cols=261 Identities=26% Similarity=0.392 Sum_probs=206.2
Q ss_pred CCCcCceecccCceEEEEEEEc-CC---cEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCee-EE
Q 002255 591 NFSEENVLGRGGFGTVYKGELH-DG---TKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNER-LL 665 (947)
Q Consensus 591 ~~~~~~~lg~G~~g~Vy~~~~~-~g---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-~l 665 (947)
.|...++||+|+||.||+|.+. ++ ..||+|++... ......+.+.+|+.++++++||||+++++++.+.+.. ++
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 100 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI-TEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHV 100 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTC-CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeecccc-ccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEE
Confidence 4556789999999999999764 22 37999998753 2445668899999999999999999999999876655 99
Q ss_pred EEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCccee
Q 002255 666 VYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 745 (947)
Q Consensus 666 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~ 745 (947)
||||+.+|+|.+++.... ..+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 101 v~e~~~~~~L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 173 (298)
T 3pls_A 101 LLPYMCHGDLLQFIRSPQ----RNPTVKDLISFGLQVARGMEYLAE---QKFVHRDLAARNCMLDESFTVKVADFGLARD 173 (298)
T ss_dssp EECCCTTCBHHHHHHCTT----CCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECCTTSSCT
T ss_pred EEecccCCCHHHHHhccc----cCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEeCcCCCccc
Confidence 999999999999996532 457899999999999999999997 7999999999999999999999999999986
Q ss_pred cCCCCC--cceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCC-CccCccchhhHHHHHHHhhcChhh
Q 002255 746 APDNGK--HSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKAL-DETQSEDSVHLVTWFRRMHINKDT 822 (947)
Q Consensus 746 ~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~-~~~~~~~~~~l~~~~~~~~~~~~~ 822 (947)
...... ........+|+.|+|||.+.+..++.++||||||+++|||++|..|+ ......+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~----------------- 236 (298)
T 3pls_A 174 ILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFD----------------- 236 (298)
T ss_dssp TTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGG-----------------
T ss_pred ccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHH-----------------
Confidence 544221 11223456889999999999999999999999999999999965554 4332221
Q ss_pred HHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhC
Q 002255 823 FRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAELWK 877 (947)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~~~ 877 (947)
....+..... ..........+.+++.+|++.||.+||++.++++.|+++.....
T Consensus 237 ~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~ 290 (298)
T 3pls_A 237 LTHFLAQGRR-LPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALL 290 (298)
T ss_dssp HHHHHHTTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCC
T ss_pred HHHHhhcCCC-CCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHh
Confidence 1111111111 11111223468899999999999999999999999999987544
No 159
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=7.1e-39 Score=353.67 Aligned_cols=268 Identities=22% Similarity=0.313 Sum_probs=194.5
Q ss_pred HHhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEE
Q 002255 587 NVTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLL 665 (947)
Q Consensus 587 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 665 (947)
...++|++.++||+|+||.||+|... +|+.||||+++.........+.+.+|++++++++||||+++++++.+++..++
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence 34578999999999999999999865 78999999997665445556778899999999999999999999999999999
Q ss_pred EEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEc-----CCCcEEEeec
Q 002255 666 VYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLG-----DDMRAKVADF 740 (947)
Q Consensus 666 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~-----~~~~~kl~Df 740 (947)
||||++ |+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++ .++.+||+||
T Consensus 111 v~e~~~-~~L~~~~~~~-----~~~~~~~~~~i~~ql~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Df 181 (329)
T 3gbz_A 111 IFEYAE-NDLKKYMDKN-----PDVSMRVIKSFLYQLINGVNFCHS---RRCLHRDLKPQNLLLSVSDASETPVLKIGDF 181 (329)
T ss_dssp EEECCS-EEHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEC-----CCEEEECCT
T ss_pred EEecCC-CCHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCEECCCCCHHHEEEecCCCCccceEEECcC
Confidence 999997 5999988653 238899999999999999999997 7999999999999994 5556999999
Q ss_pred CcceecCCCCCcceeecccccccccCccccccC-CcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcC
Q 002255 741 GLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTG-RVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHIN 819 (947)
Q Consensus 741 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~ 819 (947)
|+++....... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||......+... .........
T Consensus 182 g~a~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~--~~~~~~~~~ 257 (329)
T 3gbz_A 182 GLARAFGIPIR--QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLF--KIFEVLGLP 257 (329)
T ss_dssp THHHHHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHHHHCCC
T ss_pred CCccccCCccc--ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHH--HHHHHhCCC
Confidence 99986643221 22345789999999998774 48999999999999999999999997654332211 111111100
Q ss_pred hhh-HHHHh------hccCCCChhc------HHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 820 KDT-FRKAI------DRTIDLDEET------LASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 820 ~~~-~~~~~------~~~~~~~~~~------~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
... +.... .......... .....++.+|+.+||+.||++|||+.|+++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 258 DDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp CTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred chhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 000 00000 0000000000 012256789999999999999999999976
No 160
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=2.5e-38 Score=364.18 Aligned_cols=267 Identities=19% Similarity=0.295 Sum_probs=211.8
Q ss_pred HhcCCCcCceecccCceEEEEEEE-cCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCC-CCcceEEEEEEeCCeeEE
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGEL-HDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRH-RHLVGLLGYCLDGNERLL 665 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~l 665 (947)
+.++|++.++||+|+||.||+|.. .+++.||||++..... ..++..|+++++.++| ++++.+..++.+.+..++
T Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~l 80 (483)
T 3sv0_A 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVL 80 (483)
T ss_dssp ETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS----SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEE
T ss_pred cCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc----cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEE
Confidence 357899999999999999999987 4689999998865432 2357889999999987 556666667778889999
Q ss_pred EEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEE---cCCCcEEEeecCc
Q 002255 666 VYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGL 742 (947)
Q Consensus 666 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill---~~~~~~kl~DfGl 742 (947)
||||+ +++|.+++.... ..+++.+++.++.||+.||+|||+ ++||||||||+|||+ +.++.+||+|||+
T Consensus 81 vme~~-g~sL~~ll~~~~----~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDIKP~NILl~~~~~~~~vkL~DFGl 152 (483)
T 3sv0_A 81 VMDLL-GPSLEDLFNFCS----RKLSLKTVLMLADQMINRVEFVHS---KSFLHRDIKPDNFLMGLGRRANQVYIIDFGL 152 (483)
T ss_dssp EEECC-CCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTTCEEECCCTT
T ss_pred EEECC-CCCHHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCcceEEEecCCCCCeEEEEeCCc
Confidence 99999 999999986432 348999999999999999999997 899999999999999 6889999999999
Q ss_pred ceecCCCCCc-----ceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhh
Q 002255 743 VRLAPDNGKH-----SIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMH 817 (947)
Q Consensus 743 a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~ 817 (947)
++........ .......||+.|+|||++.+..++.++|||||||++|||++|+.||..............+....
T Consensus 153 a~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~ 232 (483)
T 3sv0_A 153 AKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK 232 (483)
T ss_dssp CEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHH
T ss_pred ceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhcc
Confidence 9876553321 11235679999999999999999999999999999999999999998766544333322222111
Q ss_pred cChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhhhC
Q 002255 818 INKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAELWK 877 (947)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~~~ 877 (947)
. ......+ ......++.+++.+||+.+|++||++.+|++.|+.+.....
T Consensus 233 ~-~~~~~~l----------~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~~ 281 (483)
T 3sv0_A 233 V-ATSIEAL----------CRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREG 281 (483)
T ss_dssp H-HSCHHHH----------HTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred c-cccHHHH----------hcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHcC
Confidence 1 0000110 01123568899999999999999999999999999876443
No 161
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=4.7e-38 Score=351.81 Aligned_cols=260 Identities=27% Similarity=0.400 Sum_probs=210.4
Q ss_pred cHHHHHHHhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEeccccc--C----hHHHHHHHHHHHHHHcC-CCCCcce
Q 002255 581 SIQVLRNVTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVV--S----EKGFAEFKSEIAVLTKV-RHRHLVG 652 (947)
Q Consensus 581 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~----~~~~~~~~~E~~~l~~l-~h~niv~ 652 (947)
.......+.++|++.+.||+|+||.||+|..+ +|+.||||++..... . ....+.+.+|+.+++++ +||||++
T Consensus 85 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~ 164 (365)
T 2y7j_A 85 DWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIIT 164 (365)
T ss_dssp HHHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCC
T ss_pred cchhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 34556677789999999999999999999886 799999999875431 1 12245788999999999 7999999
Q ss_pred EEEEEEeCCeeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCC
Q 002255 653 LLGYCLDGNERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD 732 (947)
Q Consensus 653 l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~ 732 (947)
+++++......++||||+++++|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+||+++.+
T Consensus 165 ~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~~LH~---~gi~H~Dlkp~NIl~~~~ 236 (365)
T 2y7j_A 165 LIDSYESSSFMFLVFDLMRKGELFDYLTEK-----VALSEKETRSIMRSLLEAVSFLHA---NNIVHRDLKPENILLDDN 236 (365)
T ss_dssp EEEEEEBSSEEEEEECCCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTT
T ss_pred EEEEEeeCCEEEEEEEeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCC
Confidence 999999999999999999999999998653 348899999999999999999997 799999999999999999
Q ss_pred CcEEEeecCcceecCCCCCcceeecccccccccCcccccc------CCcCcccccccHHHHHHHHHhCCCCCCccCccch
Q 002255 733 MRAKVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVT------GRVTTKVDVFSFGVILMELITGRKALDETQSEDS 806 (947)
Q Consensus 733 ~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~ 806 (947)
+.+||+|||++........ .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.......
T Consensus 237 ~~ikl~DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~- 312 (365)
T 2y7j_A 237 MQIRLSDFGFSCHLEPGEK---LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQIL- 312 (365)
T ss_dssp CCEEECCCTTCEECCTTCC---BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-
T ss_pred CCEEEEecCcccccCCCcc---cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHH-
Confidence 9999999999987754322 234679999999998863 358899999999999999999999997643211
Q ss_pred hhHHHHHHHhhcChhhHHHHhhccCCCChhc-HHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 807 VHLVTWFRRMHINKDTFRKAIDRTIDLDEET-LASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 807 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
.+..+........... ......+.+++.+||+.||++||++.|+++
T Consensus 313 ---------------~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 313 ---------------MLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp ---------------HHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ---------------HHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1111222222211111 122345889999999999999999999976
No 162
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=6.4e-39 Score=354.82 Aligned_cols=252 Identities=23% Similarity=0.364 Sum_probs=202.3
Q ss_pred HHhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcC-CCCCcceEEEEEEeCCeeE
Q 002255 587 NVTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKV-RHRHLVGLLGYCLDGNERL 664 (947)
Q Consensus 587 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 664 (947)
.+.++|++.+.||+|+||.||+|..+ +|+.||||++..... ...+|++++.++ +||||+++++++.+++..+
T Consensus 19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~ 92 (342)
T 2qr7_A 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR------DPTEEIEILLRYGQHPNIITLKDVYDDGKYVY 92 (342)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC------CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEE
T ss_pred CccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC------ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEE
Confidence 35678999999999999999999876 688999999976532 234688888888 7999999999999999999
Q ss_pred EEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCC----CcEEEeec
Q 002255 665 LVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD----MRAKVADF 740 (947)
Q Consensus 665 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~----~~~kl~Df 740 (947)
+||||+++|+|.+++... ..+++.++..++.||+.||+|||+ .+|+||||||+||++..+ +.+||+||
T Consensus 93 lv~E~~~gg~L~~~i~~~-----~~~~~~~~~~~~~qi~~al~~lH~---~givHrDlkp~NIl~~~~~~~~~~~kl~Df 164 (342)
T 2qr7_A 93 VVTELMKGGELLDKILRQ-----KFFSEREASAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDF 164 (342)
T ss_dssp EEECCCCSCBHHHHHHTC-----TTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSCSGGGEEECCC
T ss_pred EEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcEeccCCHHHEEEecCCCCcCeEEEEEC
Confidence 999999999999988653 348899999999999999999997 899999999999998543 35999999
Q ss_pred CcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcCh
Q 002255 741 GLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINK 820 (947)
Q Consensus 741 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~ 820 (947)
|+++....... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||..........+.
T Consensus 165 g~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~---------- 232 (342)
T 2qr7_A 165 GFAKQLRAENG--LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEIL---------- 232 (342)
T ss_dssp TTCEECBCTTC--CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHH----------
T ss_pred CCcccCcCCCC--ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHH----------
Confidence 99987654322 223457999999999998888999999999999999999999999764332222111
Q ss_pred hhHHHHhhccCCCChh-cHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 821 DTFRKAIDRTIDLDEE-TLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 821 ~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
..+....+..... .......+.+|+.+||+.||++||++.|+++
T Consensus 233 ---~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 233 ---ARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp ---HHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred ---HHHccCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 2222222222111 1123356789999999999999999999877
No 163
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1e-38 Score=352.32 Aligned_cols=261 Identities=33% Similarity=0.523 Sum_probs=206.2
Q ss_pred cCCCcCceecccCceEEEEEEEc-CCcE--EEEEEecccccChHHHHHHHHHHHHHHcC-CCCCcceEEEEEEeCCeeEE
Q 002255 590 NNFSEENVLGRGGFGTVYKGELH-DGTK--IAVKRMESAVVSEKGFAEFKSEIAVLTKV-RHRHLVGLLGYCLDGNERLL 665 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~--vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 665 (947)
++|++.+.||+|+||.||+|+.. +|.. ||+|+++... .....+.+.+|+++++++ +||||+++++++.+++..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeecccc-chHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence 67889999999999999999765 5664 4999887532 344556789999999999 89999999999999999999
Q ss_pred EEEecCCCchhhhhhcccc-----------cCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCc
Q 002255 666 VYEYMPQGTLSRHLFNRKE-----------EGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR 734 (947)
Q Consensus 666 V~e~~~~gsL~~~l~~~~~-----------~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~ 734 (947)
||||+++|+|.+++..... .....+++.+++.++.||+.||+|||+ .+|+||||||+||+++.++.
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYV 180 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGC
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCccceEEEcCCCe
Confidence 9999999999999976431 112458999999999999999999997 89999999999999999999
Q ss_pred EEEeecCcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCCccCccchhhHHHHH
Q 002255 735 AKVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDETQSEDSVHLVTWF 813 (947)
Q Consensus 735 ~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~l~~~~ 813 (947)
+||+|||+++..... .......+++.|+|||++.+..++.++|||||||++|||++ |+.||......+
T Consensus 181 ~kL~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~-------- 249 (327)
T 1fvr_A 181 AKIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE-------- 249 (327)
T ss_dssp EEECCTTCEESSCEE---CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--------
T ss_pred EEEcccCcCcccccc---ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHH--------
Confidence 999999998743321 11223457889999999988889999999999999999998 999997654221
Q ss_pred HHhhcChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 002255 814 RRMHINKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAEL 875 (947)
Q Consensus 814 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~ 875 (947)
..+.+..... ..........+.+++.+||+.||++||++.|+++.|+.+.+.
T Consensus 250 ---------~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 301 (327)
T 1fvr_A 250 ---------LYEKLPQGYR-LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 301 (327)
T ss_dssp ---------HHHHGGGTCC-CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred ---------HHHHhhcCCC-CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 1111111111 011112335688999999999999999999999999998764
No 164
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=5.8e-39 Score=345.87 Aligned_cols=257 Identities=21% Similarity=0.359 Sum_probs=207.0
Q ss_pred hcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEe--CCeeEE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLD--GNERLL 665 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~l 665 (947)
.++|++.+.||+|+||.||+|... +|+.||+|++..........+.+.+|++++++++||||+++++++.+ +...++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 367899999999999999999876 68999999998766666777889999999999999999999998854 578899
Q ss_pred EEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCC-----eeecCCCCCcEEEcCCCcEEEeec
Q 002255 666 VYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQS-----FIHRDLKPSNILLGDDMRAKVADF 740 (947)
Q Consensus 666 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~-----ivHrDlkp~Nill~~~~~~kl~Df 740 (947)
||||+++++|.+++...... ...+++..++.++.|++.||+|||+ .+ |+||||||+||+++.++.+||+||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~---~~~~~~~ivH~dl~p~NIl~~~~~~~kl~df 160 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKE-RQYLDEEFVLRVMTQLTLALKECHR---RSDGGHTVLHRDLKPANVFLDGKQNVKLGDF 160 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHH---HC------CCCCCSGGGEEECSSSCEEECCC
T ss_pred EEeCCCCCCHHHHHHhhccc-CCCCCHHHHHHHHHHHHHHHHHHhc---ccCCCCeeEEeccchhhEEEcCCCCEEEecC
Confidence 99999999999999764332 2458999999999999999999997 45 999999999999999999999999
Q ss_pred CcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcCh
Q 002255 741 GLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINK 820 (947)
Q Consensus 741 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~ 820 (947)
|+++....... ......||+.|+|||++.+..++.++||||||+++|||++|+.||......+ ..
T Consensus 161 g~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~---------- 225 (279)
T 2w5a_A 161 GLARILNHDTS--FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE---LA---------- 225 (279)
T ss_dssp CHHHHC---CH--HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HH----------
T ss_pred chheeeccccc--cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHH---HH----------
Confidence 99986644221 1233568999999999998899999999999999999999999997654221 11
Q ss_pred hhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 002255 821 DTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVL 869 (947)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 869 (947)
..+...... .........+.+++.+||+.||++||++.|+++.+
T Consensus 226 ---~~i~~~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~ 269 (279)
T 2w5a_A 226 ---GKIREGKFR--RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENP 269 (279)
T ss_dssp ---HHHHHTCCC--CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred ---HHHhhcccc--cCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhCh
Confidence 111111111 11112335688999999999999999999998843
No 165
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=9.3e-39 Score=349.55 Aligned_cols=269 Identities=25% Similarity=0.328 Sum_probs=199.3
Q ss_pred HHhcCCCcCceecccCceEEEEEEE-cCCcEEEEEEecccccC---hHHHHHHHHHHHHHHcCC---CCCcceEEEEEEe
Q 002255 587 NVTNNFSEENVLGRGGFGTVYKGEL-HDGTKIAVKRMESAVVS---EKGFAEFKSEIAVLTKVR---HRHLVGLLGYCLD 659 (947)
Q Consensus 587 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~ 659 (947)
.+.++|++.+.||+|+||.||+|+. .+|+.||||++...... ......+.+|++++++++ ||||+++++++..
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~ 85 (308)
T 3g33_A 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT 85 (308)
T ss_dssp ----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred ccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeec
Confidence 3467999999999999999999986 46899999998754211 111245667777777764 9999999999987
Q ss_pred CC-----eeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCc
Q 002255 660 GN-----ERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR 734 (947)
Q Consensus 660 ~~-----~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~ 734 (947)
.. ..++||||+. ++|.+++..... ..+++.++..++.||+.||+|||+ .+|+||||||+||+++.++.
T Consensus 86 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~---~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~ 158 (308)
T 3g33_A 86 SRTDREIKVTLVFEHVD-QDLRTYLDKAPP---PGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGT 158 (308)
T ss_dssp CCSSSEEEEEEEEECCC-CBHHHHHHTCCT---TCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCTTTEEECTTSC
T ss_pred cCCCCceeEEEEehhhh-cCHHHHHhhccC---CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCC
Confidence 65 5799999996 699999865432 348999999999999999999997 78999999999999999999
Q ss_pred EEEeecCcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHH
Q 002255 735 AKVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFR 814 (947)
Q Consensus 735 ~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~ 814 (947)
+||+|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+....+ ..
T Consensus 159 ~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i--~~ 233 (308)
T 3g33_A 159 VKLADFGLARIYSYQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKI--FD 233 (308)
T ss_dssp EEECSCSCTTTSTTCC---CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHH--HH
T ss_pred EEEeeCccccccCCCc---ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH--HH
Confidence 9999999998664432 224467999999999999999999999999999999999999999775543222111 11
Q ss_pred HhhcCh-hhHHH-------HhhccCCCC--hhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 815 RMHINK-DTFRK-------AIDRTIDLD--EETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 815 ~~~~~~-~~~~~-------~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
...... ..+.. .+....... .........+.+++.+||+.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 234 LIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp HHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 110000 00000 000000000 000112346789999999999999999999876
No 166
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.7e-38 Score=359.75 Aligned_cols=276 Identities=20% Similarity=0.281 Sum_probs=212.1
Q ss_pred hcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCC--eeEE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGN--ERLL 665 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~l 665 (947)
.++|.+.++||+|+||.||+|+.. +|+.||||++..... ....+.+.+|++++++++||||+++++++...+ ..++
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~l 86 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL 86 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEE
Confidence 367899999999999999999876 589999999975432 233567889999999999999999999998755 7799
Q ss_pred EEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEE----cCCCcEEEeecC
Q 002255 666 VYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL----GDDMRAKVADFG 741 (947)
Q Consensus 666 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill----~~~~~~kl~DfG 741 (947)
||||+++|+|.+++...... ..+++..++.++.||+.||+|||+ .+|+||||||+||++ +.++.+||+|||
T Consensus 87 v~e~~~~g~L~~~l~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG 161 (396)
T 4eut_A 87 IMEFCPCGSLYTVLEEPSNA--YGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161 (396)
T ss_dssp EECCCTTEEHHHHTTSGGGT--TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEECTTSCEEEEECCGG
T ss_pred EEecCCCCCHHHHHHhhhcc--cCCCHHHHHHHHHHHHHHHHHHHH---CCEEECCcCHHHEEEeecCCCceeEEEecCC
Confidence 99999999999999764332 338999999999999999999997 899999999999999 778889999999
Q ss_pred cceecCCCCCcceeecccccccccCcccccc--------CCcCcccccccHHHHHHHHHhCCCCCCccCccch-hhHHHH
Q 002255 742 LVRLAPDNGKHSIETRLAGTFGYLAPEYAVT--------GRVTTKVDVFSFGVILMELITGRKALDETQSEDS-VHLVTW 812 (947)
Q Consensus 742 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~-~~l~~~ 812 (947)
+++...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ......
T Consensus 162 ~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~ 238 (396)
T 4eut_A 162 AARELEDDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYK 238 (396)
T ss_dssp GCEECCCGG---GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHH
T ss_pred CceEccCCC---ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHH
Confidence 998765432 2234579999999998864 5678899999999999999999999975443221 111111
Q ss_pred HHHhhcChhhH---HHH----h--hccCC-CChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 002255 813 FRRMHINKDTF---RKA----I--DRTID-LDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAE 874 (947)
Q Consensus 813 ~~~~~~~~~~~---~~~----~--~~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~ 874 (947)
+..... .... ... + ...+. ...........+.+++.+||+.||++||++.++++.++++.+
T Consensus 239 ~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~ 309 (396)
T 4eut_A 239 IITGKP-SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (396)
T ss_dssp HHHSCC-TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHT
T ss_pred HhcCCC-cccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhh
Confidence 111000 0000 000 0 00000 011224555678899999999999999999999999998865
No 167
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2e-38 Score=354.95 Aligned_cols=263 Identities=25% Similarity=0.383 Sum_probs=200.9
Q ss_pred HhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCC-----
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGN----- 661 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 661 (947)
+.++|+..+.||+|+||.||+|... +|+.||||++..........+++.+|++++++++||||+++++++....
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 102 (367)
T 1cm8_A 23 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 102 (367)
T ss_dssp CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred ecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence 3578999999999999999999874 6999999999766555666788999999999999999999999997653
Q ss_pred -eeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeec
Q 002255 662 -ERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADF 740 (947)
Q Consensus 662 -~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~Df 740 (947)
..++||||+ +++|.+++.. ..+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~------~~l~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Df 172 (367)
T 1cm8_A 103 TDFYLVMPFM-GTDLGKLMKH------EKLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDF 172 (367)
T ss_dssp CCCEEEEECC-SEEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCC
T ss_pred ceEEEEEecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCHHHEEEcCCCCEEEEee
Confidence 469999999 8899998854 237889999999999999999997 89999999999999999999999999
Q ss_pred CcceecCCCCCcceeecccccccccCcccccc-CCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcC
Q 002255 741 GLVRLAPDNGKHSIETRLAGTFGYLAPEYAVT-GRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHIN 819 (947)
Q Consensus 741 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~ 819 (947)
|+++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+....+....+ +......
T Consensus 173 g~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i--~~~~g~~ 245 (367)
T 1cm8_A 173 GLARQADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEI--MKVTGTP 245 (367)
T ss_dssp TTCEECCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH--HHHHCCC
T ss_pred ecccccccc-----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH--HHhcCCC
Confidence 999876432 234578999999999877 67999999999999999999999999876543322111 1111111
Q ss_pred hh---------hHHHHhhccCCC-----ChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 820 KD---------TFRKAIDRTIDL-----DEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 820 ~~---------~~~~~~~~~~~~-----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
.. .....+...... ..........+.+|+.+||+.||++|||+.|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 246 PAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp CHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 11 111111111000 0011122356789999999999999999999987
No 168
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=6.4e-39 Score=370.94 Aligned_cols=196 Identities=27% Similarity=0.416 Sum_probs=157.4
Q ss_pred hcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeC-----Ce
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDG-----NE 662 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 662 (947)
.++|++.++||+|+||.||+|... +|+.||||++..........+++.+|++++++++|||||++++++... ..
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 478999999999999999999765 689999999977655666778899999999999999999999998543 57
Q ss_pred eEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCc
Q 002255 663 RLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGL 742 (947)
Q Consensus 663 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGl 742 (947)
.|+||||+ +++|.+++... ..+++..+..++.||+.||+|||+ .+||||||||+|||++.++.+||+|||+
T Consensus 132 ~~lv~e~~-~~~L~~~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~---~~iiHrDlKp~NILl~~~~~~kl~DFGl 202 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFRTP-----VYLTELHIKTLLYNLLVGVKYVHS---AGILHRDLKPANCLVNQDCSVKVCDFGL 202 (458)
T ss_dssp EEEEECCC-SEEHHHHHHSS-----CCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEEecc-ccchhhhcccC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCcCCCCCChhhEEECCCCCEeeccccc
Confidence 89999998 67999888542 348999999999999999999997 8999999999999999999999999999
Q ss_pred ceecCCCCCc-------------------------ceeecccccccccCcccc-ccCCcCcccccccHHHHHHHHHh
Q 002255 743 VRLAPDNGKH-------------------------SIETRLAGTFGYLAPEYA-VTGRVTTKVDVFSFGVILMELIT 793 (947)
Q Consensus 743 a~~~~~~~~~-------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwSlGvil~ellt 793 (947)
++........ ...+..+||+.|+|||++ ....++.++|||||||++|||++
T Consensus 203 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~ellt 279 (458)
T 3rp9_A 203 ARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279 (458)
T ss_dssp CBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHT
T ss_pred chhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHH
Confidence 9876432211 122346789999999976 45679999999999999999999
No 169
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.8e-38 Score=348.65 Aligned_cols=268 Identities=23% Similarity=0.317 Sum_probs=199.7
Q ss_pred hcCCCcC-ceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcC-CCCCcceEEEEEEeCCeeEE
Q 002255 589 TNNFSEE-NVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKV-RHRHLVGLLGYCLDGNERLL 665 (947)
Q Consensus 589 ~~~~~~~-~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 665 (947)
.++|++. ++||+|+||.||+|... +++.||||++.... ....+.+.+|++++.++ +||||+++++++.+++..++
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~l 88 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP--GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYL 88 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS--SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc--chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEE
Confidence 4678774 78999999999999864 68999999997652 33456889999999995 79999999999999999999
Q ss_pred EEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCc---EEEeecCc
Q 002255 666 VYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR---AKVADFGL 742 (947)
Q Consensus 666 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~---~kl~DfGl 742 (947)
||||+++|+|.+++... ..+++.++..++.||+.||+|||+ .+|+||||||+||+++.++. +||+|||+
T Consensus 89 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~ 160 (316)
T 2ac3_A 89 VFEKMRGGSILSHIHKR-----RHFNELEASVVVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFDL 160 (316)
T ss_dssp EEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESCSSSSCSEEECCTTC
T ss_pred EEEcCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEEccCCCcCceEEEEccC
Confidence 99999999999999653 247899999999999999999997 79999999999999998776 99999999
Q ss_pred ceecCCCCCc-----ceeecccccccccCcccccc-----CCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHH
Q 002255 743 VRLAPDNGKH-----SIETRLAGTFGYLAPEYAVT-----GRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTW 812 (947)
Q Consensus 743 a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~ 812 (947)
++........ .......||+.|+|||++.. ..++.++|||||||++|||++|+.||......+.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~ 240 (316)
T 2ac3_A 161 GSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGE 240 (316)
T ss_dssp CC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----
T ss_pred ccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccc
Confidence 8765432111 11223469999999999865 5689999999999999999999999976543221000000
Q ss_pred HHHhhcChhhHHHHhhccCCCChhc-HHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 813 FRRMHINKDTFRKAIDRTIDLDEET-LASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
... .........+........... ......+.+++.+||+.||++||++.|+++
T Consensus 241 ~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 241 ACP-ACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp CCH-HHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred cch-hHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 000 000011222223333322211 122356889999999999999999999977
No 170
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.4e-39 Score=355.68 Aligned_cols=245 Identities=23% Similarity=0.340 Sum_probs=203.4
Q ss_pred HHhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccCh------HHHHHHHHHHHHHHcCCCCCcceEEEEEEe
Q 002255 587 NVTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSE------KGFAEFKSEIAVLTKVRHRHLVGLLGYCLD 659 (947)
Q Consensus 587 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 659 (947)
...++|++.+.||+|+||.||+|... +++.||||++....... .....+.+|++++++++||||+++++++.+
T Consensus 21 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~ 100 (335)
T 3dls_A 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN 100 (335)
T ss_dssp HHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred ccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee
Confidence 45678999999999999999999864 68899999997654222 133467789999999999999999999999
Q ss_pred CCeeEEEEEecCCC-chhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEe
Q 002255 660 GNERLLVYEYMPQG-TLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVA 738 (947)
Q Consensus 660 ~~~~~lV~e~~~~g-sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~ 738 (947)
++..++||||+.+| +|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+
T Consensus 101 ~~~~~lv~e~~~~g~~l~~~~~~~-----~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~ 172 (335)
T 3dls_A 101 QGFFQLVMEKHGSGLDLFAFIDRH-----PRLDEPLASYIFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLI 172 (335)
T ss_dssp SSEEEEEEECCTTSCBHHHHHHTC-----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEEC
T ss_pred CCEEEEEEEeCCCCccHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeEEeccCHHHEEEcCCCcEEEe
Confidence 99999999999777 999988543 348999999999999999999997 799999999999999999999999
Q ss_pred ecCcceecCCCCCcceeecccccccccCccccccCCc-CcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhh
Q 002255 739 DFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRV-TTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMH 817 (947)
Q Consensus 739 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~ 817 (947)
|||+++....... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||......
T Consensus 173 Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------------- 236 (335)
T 3dls_A 173 DFGSAAYLERGKL---FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET------------- 236 (335)
T ss_dssp CCTTCEECCTTCC---BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG-------------
T ss_pred ecccceECCCCCc---eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH-------------
Confidence 9999987755332 234579999999999988776 78999999999999999999999753211
Q ss_pred cChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 818 INKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
........ ......+.+++.+||+.||++||++.|+++
T Consensus 237 ---------~~~~~~~~---~~~~~~l~~li~~~L~~dP~~Rps~~ell~ 274 (335)
T 3dls_A 237 ---------VEAAIHPP---YLVSKELMSLVSGLLQPVPERRTTLEKLVT 274 (335)
T ss_dssp ---------TTTCCCCS---SCCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ---------HhhccCCC---cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 01111101 112345789999999999999999999977
No 171
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.5e-38 Score=370.29 Aligned_cols=254 Identities=27% Similarity=0.364 Sum_probs=207.0
Q ss_pred HHhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEE
Q 002255 587 NVTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLL 665 (947)
Q Consensus 587 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 665 (947)
.+.++|++.++||+|+||.||+|..+ +|+.||||++............+.+|++++++++|||||++++++.+....++
T Consensus 19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 98 (486)
T 3mwu_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (486)
T ss_dssp HHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEE
Confidence 35678999999999999999999876 78999999997554334456788999999999999999999999999999999
Q ss_pred EEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEc---CCCcEEEeecCc
Q 002255 666 VYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLG---DDMRAKVADFGL 742 (947)
Q Consensus 666 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~---~~~~~kl~DfGl 742 (947)
||||+.+|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++ .++.+||+|||+
T Consensus 99 v~e~~~~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~ 170 (486)
T 3mwu_A 99 VGELYTGGELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGL 170 (486)
T ss_dssp EECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEESSSSTTCCEEECSCSC
T ss_pred EEEcCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEEECCc
Confidence 99999999999988654 248899999999999999999997 8999999999999995 566899999999
Q ss_pred ceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhh
Q 002255 743 VRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDT 822 (947)
Q Consensus 743 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 822 (947)
++...... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+....+ .
T Consensus 171 a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~----------------~ 230 (486)
T 3mwu_A 171 STCFQQNT---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD----------------I 230 (486)
T ss_dssp TTTBCCC-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH----------------H
T ss_pred CeECCCCC---ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH----------------H
Confidence 98664432 2234579999999998865 69999999999999999999999997654321 1
Q ss_pred HHHHhhccCCCChh-cHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 002255 823 FRKAIDRTIDLDEE-TLASISTVADLAGHCCAREPYQRPDMGHVVNV 868 (947)
Q Consensus 823 ~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 868 (947)
+..+.......... .......+.+++.+||+.||++|||+.++++.
T Consensus 231 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 231 LKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp HHHHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred HHHHHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 12222222222211 12234567899999999999999999999873
No 172
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=6e-39 Score=345.57 Aligned_cols=253 Identities=30% Similarity=0.475 Sum_probs=200.4
Q ss_pred hcCCCcCceecccCceEEEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeC-CeeEEEE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDG-NERLLVY 667 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~lV~ 667 (947)
.++|++.+.||+|+||.||+|+.+ |+.||||+++.. ...+.+.+|++++++++||||+++++++.+. +..++||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~ 94 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 94 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCC----C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecch----hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEE
Confidence 367899999999999999999876 899999998754 2456789999999999999999999997654 4789999
Q ss_pred EecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceecC
Q 002255 668 EYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 747 (947)
Q Consensus 668 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~ 747 (947)
||+++++|.+++..... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 95 e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 168 (278)
T 1byg_A 95 EYMAKGSLVDYLRSRGR---SVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 168 (278)
T ss_dssp CCCTTEEHHHHHHHHHH---HHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC-----
T ss_pred ecCCCCCHHHHHHhccc---ccCCHHHHHHHHHHHHHHHHHHHh---CCccccCCCcceEEEeCCCcEEEeecccccccc
Confidence 99999999999965432 237888999999999999999997 899999999999999999999999999987654
Q ss_pred CCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhcChhhHHHH
Q 002255 748 DNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDETQSEDSVHLVTWFRRMHINKDTFRKA 826 (947)
Q Consensus 748 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 826 (947)
... ....+++.|+|||++.+..++.++||||||+++|||++ |+.||......+. ...
T Consensus 169 ~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~-----------------~~~ 226 (278)
T 1byg_A 169 STQ-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV-----------------VPR 226 (278)
T ss_dssp ------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGH-----------------HHH
T ss_pred ccc-----cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHH-----------------HHH
Confidence 321 22357889999999988899999999999999999998 9999976543221 111
Q ss_pred hhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 002255 827 IDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAEL 875 (947)
Q Consensus 827 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~ 875 (947)
+..... ..........+.+++.+|++.||++||++.|+++.|+.+...
T Consensus 227 ~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 227 VEKGYK-MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp HTTTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HhcCCC-CCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence 111111 011122345688999999999999999999999999998753
No 173
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=2.1e-38 Score=368.01 Aligned_cols=252 Identities=27% Similarity=0.440 Sum_probs=205.9
Q ss_pred cCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccC-hHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEE
Q 002255 590 NNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVS-EKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVY 667 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 667 (947)
++|...++||+|+||.||+|+.+ +|+.||+|++...... ....+.+.+|++++++++||||+++++++.+.+..|+||
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 67889999999999999999885 6999999999754322 233567889999999999999999999999999999999
Q ss_pred EecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceecC
Q 002255 668 EYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 747 (947)
Q Consensus 668 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~ 747 (947)
||+++|+|.+++...... ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 265 E~~~gg~L~~~l~~~~~~-~~~l~e~~~~~~~~qi~~aL~~LH~---~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDED-NPGFQEPRAIFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp CCCTTCBHHHHHHTSSTT-SCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EeccCCCHHHHHHHhhcc-cccccHHHHHHHHHHHHHHHHHHHH---cCCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 999999999998654321 2458999999999999999999997 899999999999999999999999999998765
Q ss_pred CCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHHHh
Q 002255 748 DNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKAI 827 (947)
Q Consensus 748 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 827 (947)
.... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||......... ......+.
T Consensus 341 ~~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~------------~~~~~~i~ 406 (543)
T 3c4z_A 341 AGQT--KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVEN------------KELKQRVL 406 (543)
T ss_dssp TTCC--CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCH------------HHHHHHHH
T ss_pred CCCc--ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhH------------HHHHHHHh
Confidence 4322 223458999999999999999999999999999999999999999765432111 11112223
Q ss_pred hccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCH
Q 002255 828 DRTIDLDEETLASISTVADLAGHCCAREPYQRPDM 862 (947)
Q Consensus 828 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 862 (947)
......+. .....+.+++.+||+.||++||++
T Consensus 407 ~~~~~~p~---~~s~~~~~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 407 EQAVTYPD---KFSPASKDFCEALLQKDPEKRLGF 438 (543)
T ss_dssp HCCCCCCT---TSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred hcccCCCc---ccCHHHHHHHHHhccCCHhHCCCC
Confidence 33222221 223567899999999999999976
No 174
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=2.2e-38 Score=341.35 Aligned_cols=249 Identities=29% Similarity=0.491 Sum_probs=201.9
Q ss_pred hcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccC-hHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVS-EKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLV 666 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 666 (947)
.++|++.+.||+|+||.||+|... +++.||||++...... ......+.+|+.++++++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 468999999999999999999876 5779999998654322 22346789999999999999999999999999999999
Q ss_pred EEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceec
Q 002255 667 YEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 746 (947)
Q Consensus 667 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~ 746 (947)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++...
T Consensus 88 ~e~~~~~~l~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~ 159 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHA 159 (279)
T ss_dssp ECCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHT---TTCEECCCCGGGEEECTTSCEEECSCCEESCC
T ss_pred EecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHhEEEcCCCCEEEEeccccccC
Confidence 9999999999998653 248899999999999999999996 89999999999999999999999999998654
Q ss_pred CCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHHH
Q 002255 747 PDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKA 826 (947)
Q Consensus 747 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 826 (947)
... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||......+. ...+
T Consensus 160 ~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----------------~~~~ 219 (279)
T 3fdn_A 160 PSS----RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET----------------YKRI 219 (279)
T ss_dssp ------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH----------------HHHH
T ss_pred Ccc----cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHH----------------HHHH
Confidence 332 12345799999999999988999999999999999999999999976542211 1111
Q ss_pred hhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 002255 827 IDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNV 868 (947)
Q Consensus 827 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 868 (947)
......... .....+.+++.+||+.||++||++.|+++.
T Consensus 220 ~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 220 SRVEFTFPD---FVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp HHTCCCCCT---TSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred HhCCCCCCC---cCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 111112111 123457899999999999999999999873
No 175
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.6e-40 Score=360.98 Aligned_cols=263 Identities=21% Similarity=0.349 Sum_probs=190.2
Q ss_pred hcCCCcCceecccCceEEEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHHHHc--CCCCCcceEEEEEEeCC----e
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTK--VRHRHLVGLLGYCLDGN----E 662 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~ 662 (947)
.++|++.+.||+|+||.||+|++. |+.||||++... ....+.+|.+++.. ++||||+++++++.... .
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 75 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 75 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T-----THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEE
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc-----chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccce
Confidence 468999999999999999999875 899999998643 23567788888888 79999999999998776 7
Q ss_pred eEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhcc-----CCCeeecCCCCCcEEEcCCCcEEE
Q 002255 663 RLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLA-----HQSFIHRDLKPSNILLGDDMRAKV 737 (947)
Q Consensus 663 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~-----~~~ivHrDlkp~Nill~~~~~~kl 737 (947)
.++||||+++|+|.+++... .+++..++.++.|++.||+|||... .++|+||||||+||+++.++.+||
T Consensus 76 ~~lv~e~~~~g~L~~~l~~~------~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl 149 (303)
T 3gxj_A 76 LWLVSDYHEHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCI 149 (303)
T ss_dssp EEEEEECCTTCCHHHHHHHC------CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-B
T ss_pred eEEEEeccCCCCHHHHHhcc------CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEE
Confidence 89999999999999999542 3777888999999999999999211 289999999999999999999999
Q ss_pred eecCcceecCCCCCcc--eeecccccccccCccccccC------CcCcccccccHHHHHHHHHhC----------CCCCC
Q 002255 738 ADFGLVRLAPDNGKHS--IETRLAGTFGYLAPEYAVTG------RVTTKVDVFSFGVILMELITG----------RKALD 799 (947)
Q Consensus 738 ~DfGla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlGvil~elltg----------~~p~~ 799 (947)
+|||+++......... ......||+.|+|||++.+. .++.++|||||||++|||++| +.||.
T Consensus 150 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~ 229 (303)
T 3gxj_A 150 ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYY 229 (303)
T ss_dssp CCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTT
T ss_pred eecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeecccc
Confidence 9999997654432221 12334799999999998766 455789999999999999999 56665
Q ss_pred ccCccchhhHHHHHHHhhcChhhHHHHhhccCCCCh----hcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 002255 800 ETQSEDSVHLVTWFRRMHINKDTFRKAIDRTIDLDE----ETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAE 874 (947)
Q Consensus 800 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~ 874 (947)
........ ................. ........+.+++.+||+.||++||++.+|++.|+.+.+
T Consensus 230 ~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~ 297 (303)
T 3gxj_A 230 DLVPSDPS-----------VEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp TTCC-CCC-----------CC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CC
T ss_pred ccCCCCcc-----------HHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhh
Confidence 43221110 01111222222222111 112455678899999999999999999999999998764
No 176
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.9e-38 Score=370.02 Aligned_cols=252 Identities=26% Similarity=0.387 Sum_probs=202.1
Q ss_pred HhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEE
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLV 666 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 666 (947)
+.++|++.+.||+|+||.||+|+.+ +++.||+|++............+.+|+.++++++|||||++++++.+....++|
T Consensus 35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 114 (494)
T 3lij_A 35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV 114 (494)
T ss_dssp HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 4567999999999999999999876 688999999987654444567889999999999999999999999999999999
Q ss_pred EEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcC---CCcEEEeecCcc
Q 002255 667 YEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD---DMRAKVADFGLV 743 (947)
Q Consensus 667 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~---~~~~kl~DfGla 743 (947)
|||+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++. ++.+||+|||++
T Consensus 115 ~e~~~~g~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a 186 (494)
T 3lij_A 115 MECYKGGELFDEIIHR-----MKFNEVDAAVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLS 186 (494)
T ss_dssp EECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChhhEEEeCCCCCCcEEEEECCCC
Confidence 9999999999988654 248899999999999999999997 89999999999999976 455999999999
Q ss_pred eecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhH
Q 002255 744 RLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTF 823 (947)
Q Consensus 744 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 823 (947)
+...... ......||+.|+|||++. +.++.++||||+||++|+|++|+.||......+ .+
T Consensus 187 ~~~~~~~---~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~----------------~~ 246 (494)
T 3lij_A 187 AVFENQK---KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQE----------------IL 246 (494)
T ss_dssp EECBTTB---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----------------HH
T ss_pred eECCCCc---cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHH----------------HH
Confidence 8765432 223457999999999875 579999999999999999999999998654321 11
Q ss_pred HHHhhccCCCChhc-HHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 824 RKAIDRTIDLDEET-LASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 824 ~~~~~~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
..+........... ......+.+++.+||+.||.+|||+.|+++
T Consensus 247 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 247 RKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp HHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHhCCCCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 22222222222211 123456789999999999999999999986
No 177
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=7e-39 Score=352.14 Aligned_cols=264 Identities=27% Similarity=0.397 Sum_probs=205.8
Q ss_pred hcCCCcCceecccCceEEEEEEE-cCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEe----CCee
Q 002255 589 TNNFSEENVLGRGGFGTVYKGEL-HDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLD----GNER 663 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~ 663 (947)
.++|++.+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|++++++++||||+++++++.. ....
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 105 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH--EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEA 105 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES--SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC--CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCcee
Confidence 36799999999999999999987 57899999998654 45567789999999999999999999999873 3477
Q ss_pred EEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcc
Q 002255 664 LLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLV 743 (947)
Q Consensus 664 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla 743 (947)
++||||+++|+|.+++...... ...+++.+++.++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 106 ~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~dfg~~ 181 (317)
T 2buj_A 106 WLLLPFFKRGTLWNEIERLKDK-GNFLTEDQILWLLLGICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGSM 181 (317)
T ss_dssp EEEEECCTTCBHHHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred EEEEEeCCCCcHHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCCEEEEecCcc
Confidence 9999999999999998764322 2458999999999999999999997 79999999999999999999999999998
Q ss_pred eecCCCCCcc-------eeecccccccccCccccccCC---cCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHH
Q 002255 744 RLAPDNGKHS-------IETRLAGTFGYLAPEYAVTGR---VTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWF 813 (947)
Q Consensus 744 ~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~ 813 (947)
+......... ......||+.|+|||++.... ++.++||||||+++|||++|+.||........
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~------- 254 (317)
T 2buj_A 182 NQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD------- 254 (317)
T ss_dssp EESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTS-------
T ss_pred hhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccc-------
Confidence 7653211100 012245799999999987543 68999999999999999999999964321110
Q ss_pred HHhhcChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 002255 814 RRMHINKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAE 874 (947)
Q Consensus 814 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~ 874 (947)
.....+....... ........+.+++.+||+.||.+||++.++++.|+.+..
T Consensus 255 --------~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~ 306 (317)
T 2buj_A 255 --------SVALAVQNQLSIP-QSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP 306 (317)
T ss_dssp --------CHHHHHHCC--CC-CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred --------hhhHHhhccCCCC-ccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence 1111111111111 111223568899999999999999999999999998753
No 178
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1.8e-38 Score=343.64 Aligned_cols=250 Identities=21% Similarity=0.324 Sum_probs=203.6
Q ss_pred HHhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcC-CCCCcceEEEEEEeCCeeE
Q 002255 587 NVTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKV-RHRHLVGLLGYCLDGNERL 664 (947)
Q Consensus 587 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 664 (947)
...++|++.+.||+|+||.||+|... +++.||+|++...........++.+|+..+.++ +||||+++++++.+++..+
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~ 87 (289)
T 1x8b_A 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHML 87 (289)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEE
T ss_pred cccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEE
Confidence 35578999999999999999999886 799999999987655556678889999999999 9999999999999999999
Q ss_pred EEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCC------------
Q 002255 665 LVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD------------ 732 (947)
Q Consensus 665 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~------------ 732 (947)
+||||+++++|.+++...... ...+++.++..++.||+.||+|||+ ++|+||||||+||+++.+
T Consensus 88 lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~ 163 (289)
T 1x8b_A 88 IQNEYCNGGSLADAISENYRI-MSYFKEAELKDLLLQVGRGLRYIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDE 163 (289)
T ss_dssp EEEECCTTCBHHHHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEC--------------
T ss_pred EEEEecCCCcHHHHHHhhccc-ccCCCHHHHHHHHHHHHHHHHHHHh---CCEeecCCCHHHEEEcCCCCCccccccccc
Confidence 999999999999999764322 1348899999999999999999997 899999999999999844
Q ss_pred -------CcEEEeecCcceecCCCCCcceeecccccccccCccccccC-CcCcccccccHHHHHHHHHhCCCCCCccCcc
Q 002255 733 -------MRAKVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTG-RVTTKVDVFSFGVILMELITGRKALDETQSE 804 (947)
Q Consensus 733 -------~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~p~~~~~~~ 804 (947)
..+||+|||.++...... ...||+.|+|||++.+. .++.++|||||||++|||++|.+++.....
T Consensus 164 ~~~~~~~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~- 236 (289)
T 1x8b_A 164 DDWASNKVMFKIGDLGHVTRISSPQ------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ- 236 (289)
T ss_dssp ------CCCEEECCCTTCEETTCSC------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH-
T ss_pred ccccCCceEEEEcccccccccCCcc------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH-
Confidence 489999999998765432 23599999999998765 567899999999999999999887643211
Q ss_pred chhhHHHHHHHhhcChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 805 DSVHLVTWFRRMHINKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 805 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
...+...... ..+......+.+++.+||+.||++||++.|+++
T Consensus 237 ------------------~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 237 ------------------WHEIRQGRLP--RIPQVLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp ------------------HHHHHTTCCC--CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ------------------HHHHHcCCCC--CCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 1111111111 111122356889999999999999999999976
No 179
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=3.3e-38 Score=359.62 Aligned_cols=255 Identities=25% Similarity=0.377 Sum_probs=194.5
Q ss_pred HHHhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccC------hHHHHHHHHHHHHHHcCCCCCcceEEEEEE
Q 002255 586 RNVTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVS------EKGFAEFKSEIAVLTKVRHRHLVGLLGYCL 658 (947)
Q Consensus 586 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 658 (947)
..+.++|.+.+.||+|+||.||+|... +++.||||++...... ......+.+|++++++++|||||++++++.
T Consensus 131 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~ 210 (419)
T 3i6u_A 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD 210 (419)
T ss_dssp HHHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE
T ss_pred hhhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence 356789999999999999999999875 6899999999764321 122335889999999999999999999975
Q ss_pred eCCeeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCC---CcE
Q 002255 659 DGNERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD---MRA 735 (947)
Q Consensus 659 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~---~~~ 735 (947)
.+..++||||+++|+|.+++... ..+++.++..++.|++.||+|||+ .+|+||||||+|||++.+ +.+
T Consensus 211 -~~~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~~~~ 281 (419)
T 3i6u_A 211 -AEDYYIVLELMEGGELFDKVVGN-----KRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLI 281 (419)
T ss_dssp -SSEEEEEEECCTTCBGGGGTSSS-----CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSSSCCE
T ss_pred -cCceEEEEEcCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCCCcceE
Confidence 45689999999999999988543 348999999999999999999997 799999999999999754 459
Q ss_pred EEeecCcceecCCCCCcceeecccccccccCcccccc---CCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHH
Q 002255 736 KVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVT---GRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTW 812 (947)
Q Consensus 736 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~ 812 (947)
||+|||+++..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ +.
T Consensus 282 kl~DFG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~--~~-- 354 (419)
T 3i6u_A 282 KITDFGHSKILGET---SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS--LK-- 354 (419)
T ss_dssp EECCSSTTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCC--HH--
T ss_pred EEeecccceecCCC---ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHH--HH--
Confidence 99999999876442 22334679999999999853 5688899999999999999999999976543211 11
Q ss_pred HHHhhcChhhHHHHhhccCCCChhc-HHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 813 FRRMHINKDTFRKAIDRTIDLDEET-LASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
..+........... ......+.+++.+||+.||++||++.|+++
T Consensus 355 -----------~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 355 -----------DQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp -----------HHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred -----------HHHhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 11111111111111 122356789999999999999999999876
No 180
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=4.1e-38 Score=360.54 Aligned_cols=203 Identities=27% Similarity=0.392 Sum_probs=170.4
Q ss_pred HhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeC-----C
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDG-----N 661 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~ 661 (947)
+.++|++.++||+|+||.||+|... +|+.||||++..........+++.+|++++++++||||+++++++... .
T Consensus 24 i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 103 (432)
T 3n9x_A 24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD 103 (432)
T ss_dssp CCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred ecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence 3578999999999999999999875 688999999987655666678899999999999999999999999766 5
Q ss_pred eeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecC
Q 002255 662 ERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 741 (947)
Q Consensus 662 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG 741 (947)
..|+||||+. |+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 104 ~~~lv~e~~~-~~L~~~~~~~-----~~l~~~~~~~i~~qil~aL~~LH~---~givHrDlkp~NILl~~~~~~kL~DFG 174 (432)
T 3n9x_A 104 ELYIVLEIAD-SDLKKLFKTP-----IFLTEEHIKTILYNLLLGENFIHE---SGIIHRDLKPANCLLNQDCSVKVCDFG 174 (432)
T ss_dssp CEEEEEECCS-EEHHHHHHSS-----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred eEEEEEecCC-cCHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHeEECCCCCEEEccCC
Confidence 7899999985 6999988542 348999999999999999999997 799999999999999999999999999
Q ss_pred cceecCCCCCc--------------------ceeecccccccccCcccc-ccCCcCcccccccHHHHHHHHHhCCCCCC
Q 002255 742 LVRLAPDNGKH--------------------SIETRLAGTFGYLAPEYA-VTGRVTTKVDVFSFGVILMELITGRKALD 799 (947)
Q Consensus 742 la~~~~~~~~~--------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwSlGvil~elltg~~p~~ 799 (947)
+++........ ...+..+||+.|+|||++ ....++.++|||||||++|||++|..||.
T Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 175 LARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp TCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred CcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 99876543211 112456899999999986 55679999999999999999998655543
No 181
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=342.48 Aligned_cols=251 Identities=28% Similarity=0.471 Sum_probs=184.6
Q ss_pred hcCCCcCceecccCceEEEEEEE-cCCcEEEEEEecccccC-hHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGEL-HDGTKIAVKRMESAVVS-EKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLV 666 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 666 (947)
.++|++.+.||+|+||.||+|+. .+|+.||||++...... ....+.+.+|++++++++||||+++++++.+++..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 46799999999999999999987 47899999998654221 12346789999999999999999999999999999999
Q ss_pred EEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceec
Q 002255 667 YEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 746 (947)
Q Consensus 667 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~ 746 (947)
|||+++++|.+++.... ..+++..+..++.|+++||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 90 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~ 162 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRV----KPFSENEARHFMHQIITGMLYLHS---HGILHRDLTLSNLLLTRNMNIKIADFGLATQL 162 (278)
T ss_dssp EECCTTEEHHHHHHTCS----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSSCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EecCCCCcHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEEeecceeec
Confidence 99999999999986532 458999999999999999999997 79999999999999999999999999999876
Q ss_pred CCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHHH
Q 002255 747 PDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKA 826 (947)
Q Consensus 747 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 826 (947)
..... ......||+.|+|||++.+..++.++||||||+++|||++|+.||......+. +...
T Consensus 163 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----------------~~~~ 224 (278)
T 3cok_A 163 KMPHE--KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT----------------LNKV 224 (278)
T ss_dssp C------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---------------------C
T ss_pred cCCCC--cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH----------------HHHH
Confidence 53222 12235789999999999888899999999999999999999999976543221 1111
Q ss_pred hhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 827 IDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 827 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
.......+. .....+.+++.+||+.||++||++.++++
T Consensus 225 ~~~~~~~~~---~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 225 VLADYEMPS---FLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp CSSCCCCCT---TSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhcccCCcc---ccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 111111111 12346789999999999999999999876
No 182
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=4.1e-38 Score=339.99 Aligned_cols=252 Identities=24% Similarity=0.384 Sum_probs=203.9
Q ss_pred hcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccCh----HHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCee
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSE----KGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNER 663 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 663 (947)
.++|++.+.||+|+||.||+|... +|+.||+|+++...... ...+.+.+|+.++++++||||+++++++.+++..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 467999999999999999999886 68999999987653322 1357899999999999999999999999999999
Q ss_pred EEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCC----cEEEee
Q 002255 664 LLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM----RAKVAD 739 (947)
Q Consensus 664 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~----~~kl~D 739 (947)
++||||+++++|.+++... ..+++.++..++.||+.||+|||+ .+|+||||||+||+++.++ .+||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~~~~kl~d 155 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAEK-----ESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLID 155 (283)
T ss_dssp EEEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSSSSCCEEECC
T ss_pred EEEEeecCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChHHEEEecCCCCCCceEEEe
Confidence 9999999999999998653 348899999999999999999997 8999999999999999877 899999
Q ss_pred cCcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcC
Q 002255 740 FGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHIN 819 (947)
Q Consensus 740 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~ 819 (947)
||+++....... .....||+.|+|||++.+..++.++||||||+++|||++|+.||......+.
T Consensus 156 fg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~------------- 219 (283)
T 3bhy_A 156 FGIAHKIEAGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQET------------- 219 (283)
T ss_dssp CTTCEECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-------------
T ss_pred cccceeccCCCc---ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHH-------------
Confidence 999987654322 2345699999999999988999999999999999999999999976542211
Q ss_pred hhhHHHHhhccCCCChh-cHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 820 KDTFRKAIDRTIDLDEE-TLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 820 ~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
+..+.......... .......+.+++.+|++.||++||++.|+++
T Consensus 220 ---~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 220 ---LTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp ---HHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ---HHHhHhcccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence 11111111111111 1122345789999999999999999999987
No 183
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=6.2e-38 Score=366.69 Aligned_cols=252 Identities=25% Similarity=0.367 Sum_probs=203.9
Q ss_pred HhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccCh-----------HHHHHHHHHHHHHHcCCCCCcceEEE
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSE-----------KGFAEFKSEIAVLTKVRHRHLVGLLG 655 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~-----------~~~~~~~~E~~~l~~l~h~niv~l~~ 655 (947)
+.++|.+.++||+|+||.||+|..+ +++.||||++....... ...+.+.+|+.++++++|||||++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 5688999999999999999999876 58899999997653221 33567899999999999999999999
Q ss_pred EEEeCCeeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCC--
Q 002255 656 YCLDGNERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM-- 733 (947)
Q Consensus 656 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~-- 733 (947)
++.++...++||||+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+||+++.++
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~ 185 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINR-----HKFDECDAANIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSL 185 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESSTTCC
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCcHHHEEEecCCCC
Confidence 999999999999999999999988653 248999999999999999999997 8999999999999998776
Q ss_pred -cEEEeecCcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHH
Q 002255 734 -RAKVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTW 812 (947)
Q Consensus 734 -~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~ 812 (947)
.+||+|||+++...... ......||+.|+|||++. +.++.++||||+||++|+|++|+.||.+....+
T Consensus 186 ~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------- 254 (504)
T 3q5i_A 186 LNIKIVDFGLSSFFSKDY---KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQD------- 254 (504)
T ss_dssp SSEEECCCTTCEECCTTS---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-------
T ss_pred ccEEEEECCCCEEcCCCC---ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-------
Confidence 69999999998775532 223457999999999876 579999999999999999999999998654321
Q ss_pred HHHhhcChhhHHHHhhccCCCChhcH-HHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 813 FRRMHINKDTFRKAIDRTIDLDEETL-ASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
.+..+....+......+ .....+.+|+.+||+.||.+|||+.|+++
T Consensus 255 ---------~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 255 ---------IIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp ---------HHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ---------HHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 12222222222222211 22356889999999999999999999986
No 184
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1.3e-38 Score=345.20 Aligned_cols=255 Identities=23% Similarity=0.323 Sum_probs=190.4
Q ss_pred hcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVY 667 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 667 (947)
.++|++.+.||+|+||.||+|... +|+.||||++..........+.+.++...++.++||||+++++++.+++..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 468999999999999999999874 7899999999765434444455566666688889999999999999999999999
Q ss_pred EecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCC-CeeecCCCCCcEEEcCCCcEEEeecCcceec
Q 002255 668 EYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQ-SFIHRDLKPSNILLGDDMRAKVADFGLVRLA 746 (947)
Q Consensus 668 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~-~ivHrDlkp~Nill~~~~~~kl~DfGla~~~ 746 (947)
||++ |+|.+++...... ...+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||+++..
T Consensus 86 e~~~-~~l~~~l~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVIDK-GQTIPEDILGKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 160 (290)
T ss_dssp ECCS-EEHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHH---HSCCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred ehhc-cchHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 9996 5888877553222 2458999999999999999999997 5 9999999999999999999999999999876
Q ss_pred CCCCCcceeecccccccccCcccc----ccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhh
Q 002255 747 PDNGKHSIETRLAGTFGYLAPEYA----VTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDT 822 (947)
Q Consensus 747 ~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 822 (947)
..... .....||+.|+|||++ .+..++.++|||||||++|||++|+.||....... ..
T Consensus 161 ~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---------------~~ 222 (290)
T 3fme_A 161 VDDVA---KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF---------------QQ 222 (290)
T ss_dssp ------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHH---------------HH
T ss_pred ccccc---ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchH---------------HH
Confidence 44322 2334799999999996 55678999999999999999999999997543211 11
Q ss_pred HHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 823 FRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
+...+..... ..........+.+++.+|++.||++|||+.|+++
T Consensus 223 ~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 223 LKQVVEEPSP-QLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp HHHHHHSCCC-CCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHhccCCC-CcccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 1122222111 1111122356889999999999999999999977
No 185
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=2.9e-38 Score=349.25 Aligned_cols=267 Identities=23% Similarity=0.379 Sum_probs=203.7
Q ss_pred hcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVY 667 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 667 (947)
.++|++.+.||+|+||.||+|... +|+.||||++..........+.+.+|++++++++||||+++++++.+++..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 367999999999999999999876 5899999999776556666778899999999999999999999999999999999
Q ss_pred EecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceecC
Q 002255 668 EYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 747 (947)
Q Consensus 668 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~ 747 (947)
||+++++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 104 e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 175 (331)
T 4aaa_A 104 EFVDHTILDDLELFP-----NGLDYQVVQKYLFQIINGIGFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLA 175 (331)
T ss_dssp ECCSEEHHHHHHHST-----TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred ecCCcchHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHH---CCEEccCcChheEEEcCCCcEEEEeCCCceeec
Confidence 999999998876432 348899999999999999999997 899999999999999999999999999998664
Q ss_pred CCCCcceeecccccccccCccccccC-CcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHHH
Q 002255 748 DNGKHSIETRLAGTFGYLAPEYAVTG-RVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKA 826 (947)
Q Consensus 748 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 826 (947)
.... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||......+.... ...............
T Consensus 176 ~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~--~~~~~~~~~~~~~~~ 251 (331)
T 4aaa_A 176 APGE--VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYH--IMMCLGNLIPRHQEL 251 (331)
T ss_dssp ----------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH--HHHHHCSCCHHHHHH
T ss_pred CCcc--ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHH--HHHHhCCCChhhhhH
Confidence 4322 22345799999999998765 689999999999999999999999977654322211 111111101111111
Q ss_pred hhcc----------CCC-Ch---hcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 827 IDRT----------IDL-DE---ETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 827 ~~~~----------~~~-~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
+... ... .. ........+.+|+.+||+.||++||++.|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 252 FNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp HHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred hhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 1100 000 00 00122456889999999999999999999876
No 186
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.8e-38 Score=343.03 Aligned_cols=251 Identities=29% Similarity=0.496 Sum_probs=206.3
Q ss_pred HHhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEe------
Q 002255 587 NVTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLD------ 659 (947)
Q Consensus 587 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------ 659 (947)
...++|++.+.||+|+||.||+|... +|+.||+|++.... +.+.+|++++++++||||+++++++..
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (284)
T 2a19_B 8 RFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPE 81 (284)
T ss_dssp HHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC--
T ss_pred hhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcc
Confidence 45578999999999999999999886 79999999987542 356789999999999999999998864
Q ss_pred ----------CCeeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEE
Q 002255 660 ----------GNERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL 729 (947)
Q Consensus 660 ----------~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill 729 (947)
....++||||+++|+|.+++..... ..+++..++.++.||+.||+|||+ .+|+||||||+||++
T Consensus 82 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~ 155 (284)
T 2a19_B 82 TSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG---EKLDKVLALELFEQITKGVDYIHS---KKLINRDLKPSNIFL 155 (284)
T ss_dssp -------CCEEEEEEEEECCCCSCBHHHHHHHGGG---SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEE
T ss_pred cccccccccCcceEEEEEeccCCCCHHHHHhhccC---CCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHEEE
Confidence 3457999999999999999975432 358899999999999999999997 799999999999999
Q ss_pred cCCCcEEEeecCcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhH
Q 002255 730 GDDMRAKVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHL 809 (947)
Q Consensus 730 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l 809 (947)
+.++.+||+|||+++....... .....||+.|+|||++.+..++.++||||||+++|||++|..|+....
T Consensus 156 ~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~------- 225 (284)
T 2a19_B 156 VDTKQVKIGDFGLVTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS------- 225 (284)
T ss_dssp EETTEEEECCCTTCEESSCCSC---CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH-------
T ss_pred cCCCCEEECcchhheecccccc---ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH-------
Confidence 9999999999999987755322 234579999999999998899999999999999999999998874321
Q ss_pred HHHHHHhhcChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 002255 810 VTWFRRMHINKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAEL 875 (947)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~ 875 (947)
..........+. . .....+.+++.+||+.||++||++.|+++.|+.+.+.
T Consensus 226 -----------~~~~~~~~~~~~-~----~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~ 275 (284)
T 2a19_B 226 -----------KFFTDLRDGIIS-D----IFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKS 275 (284)
T ss_dssp -----------HHHHHHHTTCCC-T----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred -----------HHHHHhhccccc-c----cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhC
Confidence 001111111111 1 1224578999999999999999999999999987653
No 187
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=6.3e-38 Score=340.56 Aligned_cols=251 Identities=24% Similarity=0.413 Sum_probs=207.9
Q ss_pred hcCCCcCceecccCceEEEEEEEc-CCcEEEEEEeccccc-ChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVV-SEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLV 666 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 666 (947)
.++|.+.+.||+|+||.||+|... +++.||+|++..... .....+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 467889999999999999999876 588999999876542 345567889999999999999999999999999999999
Q ss_pred EEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceec
Q 002255 667 YEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 746 (947)
Q Consensus 667 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~ 746 (947)
|||+++++|.+++... ..+++.++..++.|+++||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 94 ~e~~~~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 165 (294)
T 2rku_A 94 LELCRRRSLLELHKRR-----KALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 165 (294)
T ss_dssp EECCTTCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEcCCCCEEEEeccCceec
Confidence 9999999999988543 348899999999999999999997 89999999999999999999999999999876
Q ss_pred CCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHHH
Q 002255 747 PDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKA 826 (947)
Q Consensus 747 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 826 (947)
..... ......||+.|+|||++.+..++.++||||||+++|||++|+.||......+. ...+
T Consensus 166 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~----------------~~~~ 227 (294)
T 2rku_A 166 EYDGE--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET----------------YLRI 227 (294)
T ss_dssp CSTTC--CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH----------------HHHH
T ss_pred ccCcc--ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH----------------HHHH
Confidence 54322 22345799999999999888899999999999999999999999976542211 1111
Q ss_pred hhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 002255 827 IDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNV 868 (947)
Q Consensus 827 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 868 (947)
......... .....+.+++.+|++.||++||++.|+++.
T Consensus 228 ~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 228 KKNEYSIPK---HINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp HTTCCCCCT---TSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred hhccCCCcc---ccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 122222111 223457899999999999999999999873
No 188
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1.7e-38 Score=344.48 Aligned_cols=260 Identities=27% Similarity=0.433 Sum_probs=199.1
Q ss_pred cCCCcCceecccCceEEEEEEEc--CCc--EEEEEEeccccc-ChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeE
Q 002255 590 NNFSEENVLGRGGFGTVYKGELH--DGT--KIAVKRMESAVV-SEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERL 664 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~--~g~--~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 664 (947)
++|++.+.||+|+||.||+|++. +++ .||||+++.... .....+.+.+|++++++++||||+++++++..+. .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 57899999999999999999864 233 689999876532 3345678999999999999999999999998765 88
Q ss_pred EEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcce
Q 002255 665 LVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 744 (947)
Q Consensus 665 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~ 744 (947)
+||||+++++|.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++
T Consensus 97 ~v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~ 169 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKHQ----GHFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMR 169 (291)
T ss_dssp EEEECCTTCBHHHHHHHHG----GGSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred eeEecccCCCHHHHHHhcc----CCcCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEEcCCCCEEEccccccc
Confidence 9999999999999986543 348899999999999999999997 899999999999999999999999999998
Q ss_pred ecCCCCCcc-eeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhcChhh
Q 002255 745 LAPDNGKHS-IETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDETQSEDSVHLVTWFRRMHINKDT 822 (947)
Q Consensus 745 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 822 (947)
......... ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||......+.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~---------------- 233 (291)
T 1u46_A 170 ALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI---------------- 233 (291)
T ss_dssp ECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH----------------
T ss_pred cccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHH----------------
Confidence 775543322 2234567889999999988889999999999999999999 9999976543211
Q ss_pred HHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 002255 823 FRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAE 874 (947)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~ 874 (947)
...+...... ..........+.+++.+|++.||++||++.++++.|+++..
T Consensus 234 ~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 284 (291)
T 1u46_A 234 LHKIDKEGER-LPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 284 (291)
T ss_dssp HHHHHTSCCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred HHHHHccCCC-CCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence 1111111111 11112234568899999999999999999999999988753
No 189
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=7.1e-38 Score=351.51 Aligned_cols=263 Identities=24% Similarity=0.326 Sum_probs=196.9
Q ss_pred hcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCC------
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGN------ 661 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 661 (947)
.++|++.+.||+|+||.||+|... +|+.||||++..........+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 478999999999999999999865 6899999999876555666788999999999999999999999997654
Q ss_pred eeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecC
Q 002255 662 ERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 741 (947)
Q Consensus 662 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG 741 (947)
..++||||++ |+|.+.+.. .+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 104 ~~~lv~e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 172 (371)
T 2xrw_A 104 DVYIVMELMD-ANLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFG 172 (371)
T ss_dssp EEEEEEECCS-EEHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCCC
T ss_pred ceEEEEEcCC-CCHHHHHhh-------ccCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEEEee
Confidence 7899999996 578777732 37889999999999999999997 799999999999999999999999999
Q ss_pred cceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhc---
Q 002255 742 LVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHI--- 818 (947)
Q Consensus 742 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~--- 818 (947)
+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+....+.... .+.....
T Consensus 173 ~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~--i~~~~~~~~~ 247 (371)
T 2xrw_A 173 LARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK--VIEQLGTPCP 247 (371)
T ss_dssp C-------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH--HHC-CCCCCH
T ss_pred ccccccccc---ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH--HHHHhCCCCH
Confidence 998664321 22345799999999999998999999999999999999999999987543221110 0000000
Q ss_pred -----ChhhHHHHhhccCCC-----------------ChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 819 -----NKDTFRKAIDRTIDL-----------------DEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 819 -----~~~~~~~~~~~~~~~-----------------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
........+...... ..........+.+|+.+||+.||++|||++|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 248 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp HHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 001111111111100 0111223567889999999999999999999987
No 190
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1.6e-38 Score=355.89 Aligned_cols=266 Identities=21% Similarity=0.336 Sum_probs=206.2
Q ss_pred hcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVY 667 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 667 (947)
.++|++.+.||+|+||.||+|... +|+.||+|++.... .....+.+.+|+.++++++||||+++++++.+++..++||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 110 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 110 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC-CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc-CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEE
Confidence 367999999999999999999876 68999999987653 4556678999999999999999999999999999999999
Q ss_pred EecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceecC
Q 002255 668 EYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 747 (947)
Q Consensus 668 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~ 747 (947)
||+++++|.+++.... .+++..+..++.|++.||+|||+ +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 111 e~~~~~~L~~~l~~~~-----~~~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 183 (360)
T 3eqc_A 111 EHMDGGSLDQVLKKAG-----RIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 183 (360)
T ss_dssp CCCTTCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHH--HHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHH
T ss_pred ECCCCCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHH--hCCEEcCCccHHHEEECCCCCEEEEECCCCcccc
Confidence 9999999999996532 47899999999999999999997 2489999999999999999999999999987543
Q ss_pred CCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHH--------------
Q 002255 748 DNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWF-------------- 813 (947)
Q Consensus 748 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~-------------- 813 (947)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+........
T Consensus 184 ~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (360)
T 3eqc_A 184 DS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRT 259 (360)
T ss_dssp HH----C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC----------------
T ss_pred cc----cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCccc
Confidence 21 123457999999999999999999999999999999999999999765432211110000
Q ss_pred --------HHhhcC----hhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 814 --------RRMHIN----KDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 814 --------~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
...... ............. ..........+.+|+.+||+.||++|||+.|+++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 260 PGRPLNKFGMDSRPPMAIFELLDYIVNEPPP-KLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp --------------CCCHHHHHHHHHHSCCC-CCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred CCCcccccccCCCCcccchhhhhHHhccCCC-CCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 000000 0011111111111 1111112346889999999999999999999987
No 191
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=3e-38 Score=348.36 Aligned_cols=273 Identities=24% Similarity=0.437 Sum_probs=211.8
Q ss_pred hcCCCcCceecccCceEEEEEEE-----cCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCC--
Q 002255 589 TNNFSEENVLGRGGFGTVYKGEL-----HDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGN-- 661 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-- 661 (947)
.++|++.+.||+|+||.||+|++ .+|+.||||++... .....+.+.+|++++++++||||+++++++...+
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 117 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 117 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC--CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCC
Confidence 35688999999999999999985 36889999998764 4556678999999999999999999999987644
Q ss_pred eeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecC
Q 002255 662 ERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 741 (947)
Q Consensus 662 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG 741 (947)
..++||||+++++|.+++.... ..+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 118 ~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kL~Dfg 190 (326)
T 2w1i_A 118 NLKLIMEYLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFG 190 (326)
T ss_dssp CCEEEECCCTTCBHHHHHHHST----TSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCT
T ss_pred ceEEEEECCCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCCcceEEEcCCCcEEEecCc
Confidence 6899999999999999996543 348899999999999999999997 899999999999999999999999999
Q ss_pred cceecCCCCCcc-eeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcC-
Q 002255 742 LVRLAPDNGKHS-IETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHIN- 819 (947)
Q Consensus 742 la~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~- 819 (947)
+++......... ......++..|+|||++.+..++.++||||||+++|||++|..|+...... ...........
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~----~~~~~~~~~~~~ 266 (326)
T 2w1i_A 191 LTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE----FMRMIGNDKQGQ 266 (326)
T ss_dssp TCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHH----HHHHHCTTCCTH
T ss_pred chhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHH----HHHhhccccchh
Confidence 998775543221 123345788899999998888999999999999999999999998643110 00000000000
Q ss_pred --hhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 002255 820 --KDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAEL 875 (947)
Q Consensus 820 --~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~ 875 (947)
...+.+.+...... +........+.+++.+||+.||++||++.|+++.|+.+.+.
T Consensus 267 ~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 267 MIVFHLIELLKNNGRL-PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp HHHHHHHHHHHTTCCC-CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHhhcCCCC-CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 00112222221111 11122345688999999999999999999999999998764
No 192
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=3.3e-38 Score=351.94 Aligned_cols=269 Identities=22% Similarity=0.333 Sum_probs=203.1
Q ss_pred cCCCcCceecccCceEEEEEEE-cCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEe--------C
Q 002255 590 NNFSEENVLGRGGFGTVYKGEL-HDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLD--------G 660 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--------~ 660 (947)
++|++.+.||+|+||.||+|+. .+|+.||||++............+.+|++++++++||||+++++++.. +
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 6799999999999999999987 478999999987665444445678899999999999999999999987 4
Q ss_pred CeeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeec
Q 002255 661 NERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADF 740 (947)
Q Consensus 661 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~Df 740 (947)
+..++||||++ |+|.+.+.... ..+++.++..++.||+.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 97 ~~~~lv~e~~~-~~l~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~kl~Df 168 (351)
T 3mi9_A 97 GSIYLVFDFCE-HDLAGLLSNVL----VKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADF 168 (351)
T ss_dssp CEEEEEEECCS-EEHHHHHHCTT----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCC
T ss_pred ceEEEEEeccC-CCHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCCEEEccc
Confidence 56899999996 47777775432 348999999999999999999997 89999999999999999999999999
Q ss_pred CcceecCCCCCc--ceeecccccccccCcccccc-CCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhh
Q 002255 741 GLVRLAPDNGKH--SIETRLAGTFGYLAPEYAVT-GRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMH 817 (947)
Q Consensus 741 Gla~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~ 817 (947)
|+++........ .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+....+.......
T Consensus 169 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~ 248 (351)
T 3mi9_A 169 GLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSI 248 (351)
T ss_dssp TTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred hhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Confidence 999876532211 22344678999999998876 458999999999999999999999998765433222221111110
Q ss_pred cChhhHHHHhh----ccCCC----ChhcH------HHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 818 INKDTFRKAID----RTIDL----DEETL------ASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 818 ~~~~~~~~~~~----~~~~~----~~~~~------~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
. ...+...-. ..+.. ..... .....+.+|+.+||+.||++|||+.|+++
T Consensus 249 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 249 T-PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp C-TTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred C-hhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 0 000000000 00000 00000 11245789999999999999999999977
No 193
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=4.4e-38 Score=351.72 Aligned_cols=265 Identities=26% Similarity=0.402 Sum_probs=190.2
Q ss_pred HhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeC------
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDG------ 660 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 660 (947)
+.++|++.+.||+|+||.||+|... +|+.||||++..........+.+.+|++++++++||||+++++++...
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 106 (367)
T 2fst_X 27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106 (367)
T ss_dssp EETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence 3478999999999999999999864 689999999976655566678899999999999999999999999754
Q ss_pred CeeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeec
Q 002255 661 NERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADF 740 (947)
Q Consensus 661 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~Df 740 (947)
...++||||+ +++|.+++.. ..+++..+..++.||++||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 107 ~~~~lv~e~~-~~~L~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kL~DF 176 (367)
T 2fst_X 107 NDVYLVTHLM-GADLNNIVKC------QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDF 176 (367)
T ss_dssp CCCEEEEECC-CEECC-----------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECC-
T ss_pred CeEEEEeccc-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHhhEEECCCCCEEEeec
Confidence 5679999999 7899888853 348899999999999999999997 89999999999999999999999999
Q ss_pred CcceecCCCCCcceeecccccccccCcccccc-CCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHh---
Q 002255 741 GLVRLAPDNGKHSIETRLAGTFGYLAPEYAVT-GRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRM--- 816 (947)
Q Consensus 741 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~--- 816 (947)
|+++..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+....+......
T Consensus 177 G~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~ 251 (367)
T 2fst_X 177 GLARHTADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 251 (367)
T ss_dssp -------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCH
T ss_pred ccccccccc-----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence 999865432 234579999999999876 67899999999999999999999999876543322221111000
Q ss_pred ----hcChhhHHHHhhccCCCChhcH-----HHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 817 ----HINKDTFRKAIDRTIDLDEETL-----ASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 817 ----~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
.......+..+........... .....+.+|+.+||+.||++|||+.|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 252 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp HHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 0001112222221111111111 12346789999999999999999999976
No 194
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=7.4e-38 Score=346.44 Aligned_cols=250 Identities=24% Similarity=0.419 Sum_probs=207.6
Q ss_pred hcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccc-cChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAV-VSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLV 666 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 666 (947)
.++|.+.+.||+|+||.||++... +++.||+|++.... ......+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 467899999999999999999876 57899999987653 2345567899999999999999999999999999999999
Q ss_pred EEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceec
Q 002255 667 YEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 746 (947)
Q Consensus 667 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~ 746 (947)
|||+++++|.+++... ..+++.++..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 120 ~e~~~~~~L~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 191 (335)
T 2owb_A 120 LELCRRRSLLELHKRR-----KALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 191 (335)
T ss_dssp ECCCTTCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EecCCCCCHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCEecCCCchhEEEcCCCCEEEeeccCceec
Confidence 9999999999988553 348899999999999999999997 79999999999999999999999999999876
Q ss_pred CCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHHH
Q 002255 747 PDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKA 826 (947)
Q Consensus 747 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 826 (947)
..... ......||+.|+|||++.+..++.++||||||+++|||++|+.||......+. +..+
T Consensus 192 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----------------~~~~ 253 (335)
T 2owb_A 192 EYDGE--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET----------------YLRI 253 (335)
T ss_dssp CSTTC--CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH----------------HHHH
T ss_pred ccCcc--cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHH----------------HHHH
Confidence 54322 22345799999999999988899999999999999999999999976442211 1111
Q ss_pred hhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 827 IDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 827 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
......... .....+.+++.+||+.||++||++.|+++
T Consensus 254 ~~~~~~~~~---~~~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 254 KKNEYSIPK---HINPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp HHTCCCCCT---TSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred hcCCCCCCc---cCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 122222111 12245789999999999999999999977
No 195
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-38 Score=355.60 Aligned_cols=255 Identities=24% Similarity=0.337 Sum_probs=201.8
Q ss_pred cCCCcCceecccCceEEEEEEE----cCCcEEEEEEeccccc--ChHHHHHHHHHHHHHHcC-CCCCcceEEEEEEeCCe
Q 002255 590 NNFSEENVLGRGGFGTVYKGEL----HDGTKIAVKRMESAVV--SEKGFAEFKSEIAVLTKV-RHRHLVGLLGYCLDGNE 662 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~----~~g~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 662 (947)
++|++.++||+|+||.||+|+. .+|+.||||+++.... .....+.+.+|+++++++ +||||+++++++..++.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 6799999999999999999987 3689999999875421 112335677899999999 69999999999999999
Q ss_pred eEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCc
Q 002255 663 RLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGL 742 (947)
Q Consensus 663 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGl 742 (947)
.++||||+++|+|.+++... ..+++.++..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 134 ~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 205 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQR-----ERFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGL 205 (355)
T ss_dssp EEEEECCCCSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEESCSSE
T ss_pred EEEEeecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCcEEEeeCCC
Confidence 99999999999999999653 248899999999999999999997 7999999999999999999999999999
Q ss_pred ceecCCCCCcceeecccccccccCcccccc--CCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcCh
Q 002255 743 VRLAPDNGKHSIETRLAGTFGYLAPEYAVT--GRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINK 820 (947)
Q Consensus 743 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~ 820 (947)
++....... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........
T Consensus 206 a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~----------- 273 (355)
T 1vzo_A 206 SKEFVADET-ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAE----------- 273 (355)
T ss_dssp EEECCGGGG-GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHH-----------
T ss_pred CeecccCCC-CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHH-----------
Confidence 987644222 22334679999999999875 3478999999999999999999999975543222110
Q ss_pred hhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 002255 821 DTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRP-----DMGHVVNV 868 (947)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 868 (947)
............. ......+.+|+.+||+.||++|| ++.|+++.
T Consensus 274 -~~~~~~~~~~~~~---~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 274 -ISRRILKSEPPYP---QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp -HHHHHHHCCCCCC---TTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred -HHHHHhccCCCCC---cccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 1111122111111 12234578999999999999999 88888763
No 196
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=2.8e-38 Score=368.30 Aligned_cols=252 Identities=26% Similarity=0.388 Sum_probs=208.0
Q ss_pred HhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccC-hHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEE
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVS-EKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLL 665 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 665 (947)
+.++|++.++||+|+||.||+|..+ +|+.||||++...... ....+.+.+|++++++++|||||++++++.+.+..++
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 4568999999999999999999876 7899999999765322 3446789999999999999999999999999999999
Q ss_pred EEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEE---cCCCcEEEeecCc
Q 002255 666 VYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGL 742 (947)
Q Consensus 666 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill---~~~~~~kl~DfGl 742 (947)
||||+.+|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+||++ +.++.+||+|||+
T Consensus 104 v~e~~~~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~ 175 (484)
T 3nyv_A 104 VGEVYTGGELFDEIISR-----KRFSEVDAARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGL 175 (484)
T ss_dssp EECCCCSCBHHHHHHTC-----SCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEECCTTH
T ss_pred EEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEecCCCCCcEEEEeeee
Confidence 99999999999988653 348999999999999999999997 899999999999999 5678999999999
Q ss_pred ceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhh
Q 002255 743 VRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDT 822 (947)
Q Consensus 743 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 822 (947)
++....... .....||+.|+|||++.+ .++.++||||+||++|+|++|+.||......+ .
T Consensus 176 a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~----------------~ 235 (484)
T 3nyv_A 176 STHFEASKK---MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYD----------------I 235 (484)
T ss_dssp HHHBCCCCS---HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----------------H
T ss_pred eEEcccccc---cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHH----------------H
Confidence 987654322 234579999999998865 79999999999999999999999998654321 1
Q ss_pred HHHHhhccCCCChhc-HHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 823 FRKAIDRTIDLDEET-LASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 823 ~~~~~~~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
+..+....+...... ......+.+|+.+||+.||.+|||+.|+++
T Consensus 236 ~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 236 LKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp HHHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 122222222222111 223456789999999999999999999987
No 197
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=5.5e-38 Score=342.76 Aligned_cols=250 Identities=26% Similarity=0.402 Sum_probs=203.1
Q ss_pred HhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEE
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLV 666 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 666 (947)
+.++|.+.+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSP--AFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLV 84 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC--------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccc--ccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEE
Confidence 5578999999999999999999875 68999999997542 23346788999999999999999999999999999999
Q ss_pred EEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEE---cCCCcEEEeecCcc
Q 002255 667 YEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL---GDDMRAKVADFGLV 743 (947)
Q Consensus 667 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill---~~~~~~kl~DfGla 743 (947)
|||+++++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||++ +.++.+||+|||++
T Consensus 85 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~ 156 (304)
T 2jam_A 85 MQLVSGGELFDRILER-----GVYTEKDASLVIQQVLSAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDFGLS 156 (304)
T ss_dssp ECCCCSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCSCCGGGCEESSSSTTCCEEBCSCSTT
T ss_pred EEcCCCccHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEecCCCCCCEEEccCCcc
Confidence 9999999999988653 247899999999999999999997 799999999999999 78899999999998
Q ss_pred eecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhH
Q 002255 744 RLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTF 823 (947)
Q Consensus 744 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 823 (947)
+..... ......||+.|+|||++.+..++.++||||||+++|||++|+.||......+ ..
T Consensus 157 ~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----------------~~ 216 (304)
T 2jam_A 157 KMEQNG----IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESK----------------LF 216 (304)
T ss_dssp CCCCCB----TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHH----------------HH
T ss_pred eecCCC----ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH----------------HH
Confidence 765332 1223468999999999998899999999999999999999999997644221 11
Q ss_pred HHHhhccCCCC-hhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 824 RKAIDRTIDLD-EETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 824 ~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
..+........ .........+.+++.+|++.||++||++.|+++
T Consensus 217 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 217 EKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp HHHHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred HHHHcCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11222211111 111123356889999999999999999999976
No 198
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=350.71 Aligned_cols=267 Identities=24% Similarity=0.347 Sum_probs=196.2
Q ss_pred cCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEEE
Q 002255 590 NNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVYE 668 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 668 (947)
++|.+.+.||+|+||.||+|... +++.||||++.... .......+.+|++++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEH-EEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE 80 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC-------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccc-ccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEec
Confidence 57899999999999999999876 78999999987542 11222245679999999999999999999999999999999
Q ss_pred ecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceecCC
Q 002255 669 YMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPD 748 (947)
Q Consensus 669 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~ 748 (947)
|++ |+|.+++.... ..+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 81 ~~~-~~l~~~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 152 (324)
T 3mtl_A 81 YLD-KDLKQYLDDCG----NIINMHNVKLFLFQLLRGLAYCHR---QKVLHRDLKPQNLLINERGELKLADFGLARAKSI 152 (324)
T ss_dssp CCS-EEHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCCGGGEEECTTCCEEECSSSEEECC--
T ss_pred ccc-cCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCcCHHHEEECCCCCEEEccCcccccccC
Confidence 996 68988886543 348899999999999999999997 8999999999999999999999999999986543
Q ss_pred CCCcceeecccccccccCcccccc-CCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcCh-------
Q 002255 749 NGKHSIETRLAGTFGYLAPEYAVT-GRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINK------- 820 (947)
Q Consensus 749 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~------- 820 (947)
... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+....+..........
T Consensus 153 ~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 230 (324)
T 3mtl_A 153 PTK--TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILS 230 (324)
T ss_dssp ------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGG
T ss_pred Ccc--ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhc
Confidence 221 2234578999999999876 568999999999999999999999998765433222221111100000
Q ss_pred -hhHHHHhhccCCCC---hhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 821 -DTFRKAIDRTIDLD---EETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 821 -~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
..+.....+..... .........+.+|+.+||+.||++|||+.|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 231 NEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp CHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred chhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 00000000000000 000112346789999999999999999999976
No 199
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.9e-38 Score=350.40 Aligned_cols=257 Identities=25% Similarity=0.329 Sum_probs=189.0
Q ss_pred cCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCC-CCCcceEEEEEE--------e
Q 002255 590 NNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVR-HRHLVGLLGYCL--------D 659 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~--------~ 659 (947)
.+|++.++||+|+||.||+|... +|+.||||++... .....+.+.+|+.+++++. ||||+++++++. .
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 105 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN--EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG 105 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES--SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC--chHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence 57889999999999999999875 6899999998654 4555678899999999996 999999999995 3
Q ss_pred CCeeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCC--eeecCCCCCcEEEcCCCcEEE
Q 002255 660 GNERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQS--FIHRDLKPSNILLGDDMRAKV 737 (947)
Q Consensus 660 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~--ivHrDlkp~Nill~~~~~~kl 737 (947)
....++||||+. |+|.+++...... ..+++.+++.++.||+.||+|||+ .+ |+||||||+||+++.++.+||
T Consensus 106 ~~~~~lv~e~~~-g~L~~~l~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~---~~~~ivH~Dikp~NIl~~~~~~~kl 179 (337)
T 3ll6_A 106 QAEFLLLTELCK-GQLVEFLKKMESR--GPLSCDTVLKIFYQTCRAVQHMHR---QKPPIIHRDLKVENLLLSNQGTIKL 179 (337)
T ss_dssp SEEEEEEEECCS-EEHHHHHHHHHTT--CSCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCCCCCGGGCEECTTSCEEB
T ss_pred CceEEEEEEecC-CCHHHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHh---CCCCEEEccCCcccEEECCCCCEEE
Confidence 345799999995 7999988653322 458999999999999999999996 66 999999999999999999999
Q ss_pred eecCcceecCCCCCcc----------eeecccccccccCcccc---ccCCcCcccccccHHHHHHHHHhCCCCCCccCcc
Q 002255 738 ADFGLVRLAPDNGKHS----------IETRLAGTFGYLAPEYA---VTGRVTTKVDVFSFGVILMELITGRKALDETQSE 804 (947)
Q Consensus 738 ~DfGla~~~~~~~~~~----------~~~~~~gt~~y~aPE~~---~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~ 804 (947)
+|||+++......... ......||+.|+|||++ .+..++.++|||||||++|||++|+.||......
T Consensus 180 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~ 259 (337)
T 3ll6_A 180 CDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL 259 (337)
T ss_dssp CCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC------
T ss_pred ecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH
Confidence 9999998765432211 11134689999999998 5667899999999999999999999999654321
Q ss_pred chhhHHHHHHHhhcChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 002255 805 DSVHLVTWFRRMHINKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAEL 875 (947)
Q Consensus 805 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~ 875 (947)
. .+........ .......+.+++.+||+.||++||++.|+++.|+.+...
T Consensus 260 ~--------------------~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~ 309 (337)
T 3ll6_A 260 R--------------------IVNGKYSIPP-HDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAA 309 (337)
T ss_dssp --------------------------CCCCT-TCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred H--------------------hhcCcccCCc-ccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 1 1111111010 011123467999999999999999999999999998764
No 200
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=7.9e-38 Score=341.35 Aligned_cols=251 Identities=25% Similarity=0.407 Sum_probs=206.8
Q ss_pred hcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVY 667 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 667 (947)
.+.|+..+.||+|+||.||+|... +++.||||++.... .....+.+.+|+.++++++||||+++++++.++...++||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 99 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE-AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM 99 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTT-CSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccc-cHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEE
Confidence 467899999999999999999865 68999999997653 2344678999999999999999999999999999999999
Q ss_pred EecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceecC
Q 002255 668 EYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 747 (947)
Q Consensus 668 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~ 747 (947)
||+++++|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 100 e~~~~~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~ 170 (303)
T 3a7i_A 100 EYLGGGSALDLLEP------GPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT 170 (303)
T ss_dssp ECCTTEEHHHHHTT------SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECB
T ss_pred EeCCCCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChheEEECCCCCEEEeecccceecC
Confidence 99999999998853 348899999999999999999997 899999999999999999999999999998765
Q ss_pred CCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHHHh
Q 002255 748 DNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKAI 827 (947)
Q Consensus 748 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 827 (947)
.... ......||+.|+|||++.+..++.++||||||+++|||++|+.||......... ..+ .
T Consensus 171 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~---~~~-------------~ 232 (303)
T 3a7i_A 171 DTQI--KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVL---FLI-------------P 232 (303)
T ss_dssp TTBC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH---HHH-------------H
T ss_pred cccc--ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHH---HHh-------------h
Confidence 4321 223457999999999999989999999999999999999999999765432111 111 0
Q ss_pred hccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 002255 828 DRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVL 869 (947)
Q Consensus 828 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 869 (947)
.... ..........+.+++.+||+.||++||++.|+++..
T Consensus 233 ~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 233 KNNP--PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp HSCC--CCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred cCCC--CCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 1000 011112234578999999999999999999998853
No 201
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=9.3e-38 Score=337.39 Aligned_cols=248 Identities=27% Similarity=0.449 Sum_probs=205.1
Q ss_pred hcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccC-hHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVS-EKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLV 666 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 666 (947)
.++|++.+.||+|+||.||+|... +++.||+|++...... ....+.+.+|++++++++||||+++++++.+++..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 367899999999999999999876 5788999998654221 12246789999999999999999999999999999999
Q ss_pred EEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceec
Q 002255 667 YEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 746 (947)
Q Consensus 667 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~ 746 (947)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++...
T Consensus 93 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~ 164 (284)
T 2vgo_A 93 LEFAPRGELYKELQKH-----GRFDEQRSATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHA 164 (284)
T ss_dssp ECCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEEcCCCCEEEecccccccC
Confidence 9999999999998653 247899999999999999999996 89999999999999999999999999998765
Q ss_pred CCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHHH
Q 002255 747 PDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKA 826 (947)
Q Consensus 747 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 826 (947)
.... .....|++.|+|||++.+..++.++||||||+++|||++|+.||......+ ....+
T Consensus 165 ~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----------------~~~~~ 224 (284)
T 2vgo_A 165 PSLR----RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE----------------THRRI 224 (284)
T ss_dssp SSSC----BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH----------------HHHHH
T ss_pred cccc----cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhH----------------HHHHH
Confidence 4422 234579999999999998899999999999999999999999997644221 11122
Q ss_pred hhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 827 IDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 827 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
......... .....+.+++.+|++.||.+||++.++++
T Consensus 225 ~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 225 VNVDLKFPP---FLSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp HTTCCCCCT---TSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hccccCCCC---cCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 222222221 12346789999999999999999999987
No 202
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=2.8e-39 Score=363.89 Aligned_cols=246 Identities=15% Similarity=0.162 Sum_probs=193.1
Q ss_pred hcCCCcCceecccCceEEEEEEE-cCCcEEEEEEecccc-cChHHHHHHHHHH---HHHHcCCCCCcceEE-------EE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGEL-HDGTKIAVKRMESAV-VSEKGFAEFKSEI---AVLTKVRHRHLVGLL-------GY 656 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~-~~~~~~~~~~~E~---~~l~~l~h~niv~l~-------~~ 656 (947)
.++|++.+.||+|+||.||+|.. .+|+.||||++.... ......+.+.+|+ +++++++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46788899999999999999986 569999999997542 2344567899999 555556899999998 77
Q ss_pred EEeCCe-----------------eEEEEEecCCCchhhhhhcccccC--CCcccHHHHHHHHHHHHHHHHHHhhccCCCe
Q 002255 657 CLDGNE-----------------RLLVYEYMPQGTLSRHLFNRKEEG--LKPLEWTRRLTIALDVARGVEYLHGLAHQSF 717 (947)
Q Consensus 657 ~~~~~~-----------------~~lV~e~~~~gsL~~~l~~~~~~~--~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i 717 (947)
+.+++. .++||||+ +|+|.+++....... ...+++..++.++.||+.||+|||+ .+|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHH---TTE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHh---CCe
Confidence 665532 78999999 689999997643221 1345678889999999999999997 799
Q ss_pred eecCCCCCcEEEcCCCcEEEeecCcceecCCCCCcceeecccccccccCccccccC-----------CcCcccccccHHH
Q 002255 718 IHRDLKPSNILLGDDMRAKVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTG-----------RVTTKVDVFSFGV 786 (947)
Q Consensus 718 vHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~DvwSlGv 786 (947)
+||||||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~ 301 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGL 301 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHH
Confidence 9999999999999999999999999986432 2334567 999999999887 8999999999999
Q ss_pred HHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 002255 787 ILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVV 866 (947)
Q Consensus 787 il~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 866 (947)
++|||++|+.||.......... .+..... .....+.+++.+||+.||++||++.|++
T Consensus 302 il~elltg~~Pf~~~~~~~~~~----------------~~~~~~~-------~~~~~~~~li~~~L~~dp~~Rpt~~e~l 358 (377)
T 3byv_A 302 VIYWIWCADLPITKDAALGGSE----------------WIFRSCK-------NIPQPVRALLEGFLRYPKEDRLLPLQAM 358 (377)
T ss_dssp HHHHHHHSSCCC------CCSG----------------GGGSSCC-------CCCHHHHHHHHHHTCSSGGGCCCHHHHH
T ss_pred HHHHHHHCCCCCcccccccchh----------------hhhhhcc-------CCCHHHHHHHHHHcCCCchhCCCHHHHh
Confidence 9999999999997654322110 0111100 1124578999999999999999999998
Q ss_pred H
Q 002255 867 N 867 (947)
Q Consensus 867 ~ 867 (947)
+
T Consensus 359 ~ 359 (377)
T 3byv_A 359 E 359 (377)
T ss_dssp T
T ss_pred h
Confidence 6
No 203
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.3e-37 Score=355.50 Aligned_cols=202 Identities=26% Similarity=0.350 Sum_probs=175.0
Q ss_pred HhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcC------CCCCcceEEEEEEeC
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKV------RHRHLVGLLGYCLDG 660 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~~~~~~~ 660 (947)
+..+|++.++||+|+||.||+|... +++.||||++... ......+.+|+++++.+ .|+||+++++++...
T Consensus 95 ~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 171 (429)
T 3kvw_A 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE---KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFR 171 (429)
T ss_dssp ETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEET
T ss_pred ccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc---cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccC
Confidence 3468999999999999999999775 5899999999753 34456778888888887 567999999999999
Q ss_pred CeeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCc--EEEe
Q 002255 661 NERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR--AKVA 738 (947)
Q Consensus 661 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~--~kl~ 738 (947)
...++||||+. ++|.+++..... ..+++..+..++.||+.||+|||+ .+||||||||+|||++.++. +||+
T Consensus 172 ~~~~lv~e~~~-~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NILl~~~~~~~vkL~ 244 (429)
T 3kvw_A 172 NHICMTFELLS-MNLYELIKKNKF---QGFSLPLVRKFAHSILQCLDALHK---NRIIHCDLKPENILLKQQGRSGIKVI 244 (429)
T ss_dssp TEEEEEECCCC-CBHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHHH---HTEECSCCSGGGEEESSTTSCCEEEC
T ss_pred CeEEEEEeccC-CCHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEccCCCcceEEe
Confidence 99999999995 689998865432 348999999999999999999997 79999999999999999987 9999
Q ss_pred ecCcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCcc
Q 002255 739 DFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSE 804 (947)
Q Consensus 739 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~ 804 (947)
|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 245 DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~ 305 (429)
T 3kvw_A 245 DFGSSCYEHQR-----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEG 305 (429)
T ss_dssp CCTTCEETTCC-----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred ecccceecCCc-----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHH
Confidence 99999865432 22357999999999999999999999999999999999999999876543
No 204
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.1e-38 Score=349.44 Aligned_cols=269 Identities=25% Similarity=0.325 Sum_probs=196.4
Q ss_pred HHhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccCh---HHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCe
Q 002255 587 NVTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSE---KGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNE 662 (947)
Q Consensus 587 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 662 (947)
...++|++.+.||+|+||.||+|... +|+.||||++....... ...+.+.+|++++++++||||+++++++.+.+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 44578999999999999999999875 58999999987543221 112467899999999999999999999999999
Q ss_pred eEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCc
Q 002255 663 RLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGL 742 (947)
Q Consensus 663 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGl 742 (947)
.++||||+++ +|.+++.... ..+++.++..++.|+++||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 158 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDNS----LVLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGL 158 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTCC----SSCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCGG
T ss_pred eEEEEEcCCC-CHHHHHHhcC----cCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCCHHHEEEcCCCCEEEEeccc
Confidence 9999999975 8888875432 347888899999999999999997 8999999999999999999999999999
Q ss_pred ceecCCCCCcceeecccccccccCccccccC-CcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcCh-
Q 002255 743 VRLAPDNGKHSIETRLAGTFGYLAPEYAVTG-RVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINK- 820 (947)
Q Consensus 743 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~- 820 (947)
++....... ......||+.|+|||++.+. .++.++|||||||++|||++|.+||.+....+.. ...+.......
T Consensus 159 a~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~--~~i~~~~~~~~~ 234 (346)
T 1ua2_A 159 AKSFGSPNR--AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQL--TRIFETLGTPTE 234 (346)
T ss_dssp GSTTTSCCC--CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH--HHHHHHHCCCCT
T ss_pred ceeccCCcc--cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHH--HHHHHHcCCCCh
Confidence 987644322 23345799999999998654 5899999999999999999999999765432221 11111110000
Q ss_pred hhHHHHhh--ccCC---CChhc-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 821 DTFRKAID--RTID---LDEET-----LASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 821 ~~~~~~~~--~~~~---~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
..+..... .... ..... ......+.+|+.+||+.||++|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 291 (346)
T 1ua2_A 235 EQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 291 (346)
T ss_dssp TTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred hhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence 00000000 0000 00000 122356889999999999999999999977
No 205
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=2.4e-37 Score=337.91 Aligned_cols=255 Identities=23% Similarity=0.323 Sum_probs=200.6
Q ss_pred HhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEeccccc--ChHHHHHHHHHHHHHHcCCCCCcceEEEEEE--eCCe
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVV--SEKGFAEFKSEIAVLTKVRHRHLVGLLGYCL--DGNE 662 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~ 662 (947)
..++|.+.+.||+|+||.||+|... +++.||+|++..... .....+.+.+|++++++++||||+++++++. +...
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence 4578999999999999999999874 688999999975432 1234578999999999999999999999984 4567
Q ss_pred eEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCc
Q 002255 663 RLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGL 742 (947)
Q Consensus 663 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGl 742 (947)
.++||||++++ |.+++..... ..+++..+..++.||+.||+|||+ ++|+||||||+||+++.++.+||+|||+
T Consensus 83 ~~lv~e~~~~~-l~~~~~~~~~---~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~NIl~~~~~~~kl~dfg~ 155 (305)
T 2wtk_C 83 MYMVMEYCVCG-MQEMLDSVPE---KRFPVCQAHGYFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGV 155 (305)
T ss_dssp EEEEEECCSEE-HHHHHHHSTT---CSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred EEEEehhccCC-HHHHHHhCcc---cccCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEcCCCcEEeecccc
Confidence 89999999876 7676654332 458899999999999999999997 8999999999999999999999999999
Q ss_pred ceecCCCCCcceeecccccccccCccccccCC--cCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcCh
Q 002255 743 VRLAPDNGKHSIETRLAGTFGYLAPEYAVTGR--VTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINK 820 (947)
Q Consensus 743 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~ 820 (947)
++...............||+.|+|||++.+.. ++.++||||||+++|||++|+.||......+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--------------- 220 (305)
T 2wtk_C 156 AEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYK--------------- 220 (305)
T ss_dssp CEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHH---------------
T ss_pred ccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHH---------------
Confidence 98765433333344567999999999987643 4789999999999999999999997643211
Q ss_pred hhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 002255 821 DTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNV 868 (947)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 868 (947)
....+......... .....+.+++.+|++.||++||++.|+++.
T Consensus 221 -~~~~i~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 221 -LFENIGKGSYAIPG---DCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp -HHHHHHHCCCCCCS---SSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred -HHHHHhcCCCCCCC---ccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 11111122222111 123457899999999999999999999873
No 206
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=3.9e-38 Score=349.74 Aligned_cols=256 Identities=23% Similarity=0.341 Sum_probs=200.2
Q ss_pred HhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHH-HHcCCCCCcceEEEEEEeCCeeEE
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAV-LTKVRHRHLVGLLGYCLDGNERLL 665 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~l 665 (947)
..++|++.+.||+|+||.||+|... +|+.||||++....... ...++..|+.+ ++.++||||+++++++.+++..++
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~l 127 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQ-EQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI 127 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCH-HHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcH-HHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEE
Confidence 3468889999999999999999874 78999999997664343 34455555555 778899999999999999999999
Q ss_pred EEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCccee
Q 002255 666 VYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 745 (947)
Q Consensus 666 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~ 745 (947)
||||+++ +|.+++..... ....+++..+..++.||+.||+|||+ +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 128 v~e~~~~-~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~--~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~ 203 (340)
T 3an0_A 128 CMELMDT-SLDKFYKQVID-KGQTIPEDILGKIAVSIVKALEHLHS--KLSVIHRDVKPSNVLINALGQVKMCDFGISGY 203 (340)
T ss_dssp EECCCSE-EHHHHHHHHHH-TSCCCCHHHHHHHHHHHHHHHHHHHH--HTCCCCCSCCSTTEEECSTTCEEECCCSHHHH
T ss_pred EHHHhhC-cHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhh--cCCeecCCCCHHHEEECCCCCEEEeeCCCcee
Confidence 9999974 99888865322 22468999999999999999999997 23999999999999999999999999999986
Q ss_pred cCCCCCcceeecccccccccCccccc----cCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChh
Q 002255 746 APDNGKHSIETRLAGTFGYLAPEYAV----TGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKD 821 (947)
Q Consensus 746 ~~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~ 821 (947)
.... .......||+.|+|||++. ...++.++|||||||++|||++|+.||....... .
T Consensus 204 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~---------------~ 265 (340)
T 3an0_A 204 LVDS---VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF---------------Q 265 (340)
T ss_dssp HSCH---HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHH---------------H
T ss_pred cccc---cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchH---------------H
Confidence 6432 1223357999999999964 3478999999999999999999999997543211 1
Q ss_pred hHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 822 TFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
.+...+..... ..........+.+++.+||+.||++||++.|+++
T Consensus 266 ~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 266 QLKQVVEEPSP-QLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp HHHHHHHSCCC-CCCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHHhcCCCC-CCCcccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 11122221111 1111123456889999999999999999999977
No 207
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=5.6e-38 Score=344.18 Aligned_cols=255 Identities=22% Similarity=0.350 Sum_probs=200.1
Q ss_pred HhcCCCcCceecccCceEEEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHHHHcCC--CCCcceEEEEEEeCCeeEE
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVR--HRHLVGLLGYCLDGNERLL 665 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~l 665 (947)
..++|++.+.||+|+||.||+|...+++.||||++..........+.+.+|++++++++ |+||+++++++.+++..++
T Consensus 26 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 105 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 105 (313)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEE
Confidence 34678999999999999999999888999999999876656677788999999999997 5999999999999999999
Q ss_pred EEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCccee
Q 002255 666 VYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 745 (947)
Q Consensus 666 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~ 745 (947)
||| +.+++|.+++... ..+++..+..++.|+++||+|||+ .+|+||||||+||++++ +.+||+|||+++.
T Consensus 106 v~e-~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~ 175 (313)
T 3cek_A 106 VME-CGNIDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIVD-GMLKLIDFGIANQ 175 (313)
T ss_dssp EEC-CCSEEHHHHHHHC-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEET-TEEEECCCSSSCC
T ss_pred EEe-cCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEEEC-CeEEEeecccccc
Confidence 999 5689999998653 247889999999999999999997 79999999999999964 8999999999987
Q ss_pred cCCCCCcceeecccccccccCcccccc-----------CCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHH
Q 002255 746 APDNGKHSIETRLAGTFGYLAPEYAVT-----------GRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFR 814 (947)
Q Consensus 746 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~ 814 (947)
..............||+.|+|||++.+ ..++.++||||||+++|||++|+.||.......
T Consensus 176 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~--------- 246 (313)
T 3cek_A 176 MQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI--------- 246 (313)
T ss_dssp --------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH---------
T ss_pred ccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHH---------
Confidence 654333223344579999999999865 468889999999999999999999997543211
Q ss_pred HhhcChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 002255 815 RMHINKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNV 868 (947)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 868 (947)
..+...++...... ........+.+++.+||+.||++||++.|+++.
T Consensus 247 ------~~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 247 ------SKLHAIIDPNHEIE-FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp ------HHHHHHHCTTSCCC-CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ------HHHHHHHhcccccC-CcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 11222222221111 111113467899999999999999999999873
No 208
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=6.1e-38 Score=376.78 Aligned_cols=246 Identities=24% Similarity=0.370 Sum_probs=205.3
Q ss_pred HhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEeccccc-ChHHHHHHHHHHHHHHcC-CCCCcceEEEEEEeCCeeE
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVV-SEKGFAEFKSEIAVLTKV-RHRHLVGLLGYCLDGNERL 664 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 664 (947)
..++|++.++||+|+||.||+|+.+ +++.||||+++.... .....+.+..|..++..+ +||+|+++++++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 3478999999999999999999876 588999999976421 223456788899999988 7999999999999999999
Q ss_pred EEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcce
Q 002255 665 LVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 744 (947)
Q Consensus 665 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~ 744 (947)
+||||+++|+|.+++... ..+++.++..++.||+.||+|||+ .+||||||||+|||++.++.+||+|||+++
T Consensus 419 lV~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~gIiHrDLKp~NILl~~~g~ikL~DFGla~ 490 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCK 490 (674)
T ss_dssp EEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TSEECCCCCSTTEEECSSSCEEECCCTTCE
T ss_pred EEEeCcCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeEeccCChhhEEEcCCCcEEEeecceee
Confidence 999999999999999654 248899999999999999999997 899999999999999999999999999998
Q ss_pred ecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHH
Q 002255 745 LAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFR 824 (947)
Q Consensus 745 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 824 (947)
....... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.... +.+.
T Consensus 491 ~~~~~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~----------------~~~~ 552 (674)
T 3pfq_A 491 ENIWDGV--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED----------------ELFQ 552 (674)
T ss_dssp ECCCTTC--CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH----------------HHHH
T ss_pred ccccCCc--ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHH----------------HHHH
Confidence 6543322 234568999999999999999999999999999999999999999865422 1233
Q ss_pred HHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCH
Q 002255 825 KAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDM 862 (947)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 862 (947)
.++...+.++. ....++.+|+.+||+.||++||++
T Consensus 553 ~i~~~~~~~p~---~~s~~~~~li~~lL~~dP~~R~~~ 587 (674)
T 3pfq_A 553 SIMEHNVAYPK---SMSKEAVAICKGLMTKHPGKRLGC 587 (674)
T ss_dssp HHHSSCCCCCT---TSCHHHHHHHHHHSCSSSTTCTTC
T ss_pred HHHhCCCCCCc---cCCHHHHHHHHHHccCCHHHCCCC
Confidence 34444433332 234567899999999999999997
No 209
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.7e-37 Score=340.63 Aligned_cols=253 Identities=25% Similarity=0.399 Sum_probs=199.8
Q ss_pred HHHhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeE
Q 002255 586 RNVTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERL 664 (947)
Q Consensus 586 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 664 (947)
....++|++.+.||+|+||.||+|... +|+.||||++.... ..+++.+|+.++++++||||+++++++..++..+
T Consensus 25 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 100 (314)
T 3com_A 25 KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES----DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLW 100 (314)
T ss_dssp -----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS----CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred hcchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH----HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEE
Confidence 345678999999999999999999876 58999999987542 2457889999999999999999999999999999
Q ss_pred EEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcce
Q 002255 665 LVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 744 (947)
Q Consensus 665 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~ 744 (947)
+||||+++++|.+++.... ..+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 101 lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 173 (314)
T 3com_A 101 IVMEYCGAGSVSDIIRLRN----KTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVAG 173 (314)
T ss_dssp EEEECCTTEEHHHHHHHHT----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEeecCCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCcCHHHEEECCCCCEEEeecccch
Confidence 9999999999999986422 358899999999999999999997 899999999999999999999999999998
Q ss_pred ecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHH
Q 002255 745 LAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFR 824 (947)
Q Consensus 745 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 824 (947)
....... ......||+.|+|||++.+..++.++||||||+++|||++|+.||.......... .+.
T Consensus 174 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~---~~~---------- 238 (314)
T 3com_A 174 QLTDTMA--KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIF---MIP---------- 238 (314)
T ss_dssp ECBTTBS--CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH---HHH----------
T ss_pred hhhhhcc--ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHH---HHh----------
Confidence 7644321 2234579999999999998899999999999999999999999997654221110 000
Q ss_pred HHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 825 KAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
........ ........+.+++.+||+.||.+||++.++++
T Consensus 239 ~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 239 TNPPPTFR---KPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp HSCCCCCS---SGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred cCCCcccC---CcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 00000111 11122356889999999999999999999976
No 210
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=7.3e-39 Score=352.34 Aligned_cols=261 Identities=22% Similarity=0.387 Sum_probs=201.6
Q ss_pred HhcCCCcCceecccCceEEEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEE
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVY 667 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 667 (947)
..++|++.+.||+|+||.||+|..+. .||+|+++.........+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~ 108 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIIT 108 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEEC
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEe
Confidence 34789999999999999999998763 5999998765444444567788999999999999999999999999999999
Q ss_pred EecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceecC
Q 002255 668 EYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 747 (947)
Q Consensus 668 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~ 747 (947)
||+++++|.+++.... ..+++.+++.++.||+.||+|||+ .+|+||||||+||+++ ++.+||+|||+++...
T Consensus 109 e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~ 180 (319)
T 2y4i_B 109 SLCKGRTLYSVVRDAK----IVLDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKNVFYD-NGKVVITDFGLFSISG 180 (319)
T ss_dssp BCCCSEEHHHHTTSSC----CCCCSHHHHHHHHHHHHHHHHHHH---TTCCCCCCCSTTEEEC---CCEECCCSCCC---
T ss_pred ecccCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChhhEEEe-CCCEEEeecCCccccc
Confidence 9999999999996532 358889999999999999999997 7999999999999998 6899999999987543
Q ss_pred CCC---CcceeecccccccccCcccccc---------CCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHH
Q 002255 748 DNG---KHSIETRLAGTFGYLAPEYAVT---------GRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRR 815 (947)
Q Consensus 748 ~~~---~~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~ 815 (947)
... .........||+.|+|||++.. ..++.++||||||+++|||++|+.||.........
T Consensus 181 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~-------- 252 (319)
T 2y4i_B 181 VLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAII-------- 252 (319)
T ss_dssp -------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHH--------
T ss_pred cccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH--------
Confidence 211 1112233569999999998864 35788999999999999999999999765432110
Q ss_pred hhcChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhhh
Q 002255 816 MHINKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAEL 875 (947)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~~ 875 (947)
...... .............+.+++.+|++.||++||++.++++.|+.+...
T Consensus 253 --------~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~ 303 (319)
T 2y4i_B 253 --------WQMGTG-MKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR 303 (319)
T ss_dssp --------HHHHTT-CCCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred --------HHhccC-CCCCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence 011111 000111111224578999999999999999999999999988754
No 211
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=9.6e-38 Score=340.02 Aligned_cols=267 Identities=24% Similarity=0.364 Sum_probs=200.9
Q ss_pred cCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEEE
Q 002255 590 NNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVYE 668 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 668 (947)
++|++.+.||+|+||.||+|+.+ +|+.||||++..........+.+.+|++++++++||||+++++++..++..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57899999999999999999876 68999999987654344445678899999999999999999999999999999999
Q ss_pred ecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceecCC
Q 002255 669 YMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPD 748 (947)
Q Consensus 669 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~ 748 (947)
|+. ++|.+++..... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....
T Consensus 83 ~~~-~~L~~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 155 (299)
T 2r3i_A 83 FLH-QDLKKFMDASAL---TGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 155 (299)
T ss_dssp CCS-EEHHHHHHHTTT---TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCC
T ss_pred ccc-CCHHHHHHhhhc---cCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHeEEcCCCCEEECcchhhhhccC
Confidence 997 699998865432 347889999999999999999997 7999999999999999999999999999886643
Q ss_pred CCCcceeecccccccccCccccccCC-cCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhH-HHH
Q 002255 749 NGKHSIETRLAGTFGYLAPEYAVTGR-VTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTF-RKA 826 (947)
Q Consensus 749 ~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~ 826 (947)
... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||......+. +.............. ...
T Consensus 156 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 231 (299)
T 2r3i_A 156 PVR--TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ--LFRIFRTLGTPDEVVWPGV 231 (299)
T ss_dssp CSB--CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHHHHCCCCTTTSTTG
T ss_pred Ccc--ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHH--HHHHHHHhCCCchhhhhHh
Confidence 221 123346899999999987765 78999999999999999999999976543221 111111111100000 000
Q ss_pred -----hhccC----CCC--hhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 827 -----IDRTI----DLD--EETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 827 -----~~~~~----~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
..... ... .........+.+++.+|++.||++||++.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 232 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp GGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00000 000 000112356789999999999999999999976
No 212
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=2.9e-37 Score=341.28 Aligned_cols=256 Identities=19% Similarity=0.313 Sum_probs=199.8
Q ss_pred cCCCcCceecccCceEEEEEEE-cCCcEEEEEEecccccChHHHHHHHHHHHHHHcCC-CCCcceEEEEEEe--CCeeEE
Q 002255 590 NNFSEENVLGRGGFGTVYKGEL-HDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVR-HRHLVGLLGYCLD--GNERLL 665 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~--~~~~~l 665 (947)
++|++.+.||+|+||.||+|.. .+++.||||+++.. ..+.+.+|++++++++ ||||+++++++.+ ....++
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~l 110 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV-----KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPAL 110 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-----CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc-----chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEE
Confidence 6799999999999999999986 47899999998743 2367889999999997 9999999999987 667899
Q ss_pred EEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCC-cEEEeecCcce
Q 002255 666 VYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM-RAKVADFGLVR 744 (947)
Q Consensus 666 V~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~-~~kl~DfGla~ 744 (947)
||||+++++|.+++. .+++.++..++.||+.||+|||+ .+|+||||||+|||++.++ .+||+|||+++
T Consensus 111 v~e~~~~~~l~~~~~--------~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~ 179 (330)
T 3nsz_A 111 VFEHVNNTDFKQLYQ--------TLTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 179 (330)
T ss_dssp EEECCCCCCHHHHGG--------GCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEeccCchhHHHHHH--------hCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEcCCCCEEEEEeCCCce
Confidence 999999999998873 27888899999999999999997 8999999999999999777 89999999998
Q ss_pred ecCCCCCcceeecccccccccCcccccc-CCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhH
Q 002255 745 LAPDNGKHSIETRLAGTFGYLAPEYAVT-GRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTF 823 (947)
Q Consensus 745 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 823 (947)
....... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ..+....... . ....
T Consensus 180 ~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~-~~l~~~~~~~-~-~~~~ 253 (330)
T 3nsz_A 180 FYHPGQE---YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY-DQLVRIAKVL-G-TEDL 253 (330)
T ss_dssp ECCTTCC---CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHH-HHHHHHHHHH-C-HHHH
T ss_pred EcCCCCc---cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchH-HHHHHHHHhc-C-Cchh
Confidence 7655332 234578999999999877 678999999999999999999999996543221 1111111111 0 1111
Q ss_pred HHHhhc-cCCCC---------------------hhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 824 RKAIDR-TIDLD---------------------EETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 824 ~~~~~~-~~~~~---------------------~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
.+.++. ....+ .........+.+|+.+||+.||++|||++|+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 254 YDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred hhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 111111 00000 011113456889999999999999999999976
No 213
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=2.4e-37 Score=336.10 Aligned_cols=252 Identities=22% Similarity=0.355 Sum_probs=198.1
Q ss_pred CCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEEEe
Q 002255 591 NFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVYEY 669 (947)
Q Consensus 591 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 669 (947)
+|....+||+|+||.||+|... +++.||||.+... .....+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 100 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER--DSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQ 100 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECC--CC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCC--chHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEe
Confidence 4555679999999999999874 6889999998765 334457889999999999999999999999999999999999
Q ss_pred cCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcC-CCcEEEeecCcceecCC
Q 002255 670 MPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD-DMRAKVADFGLVRLAPD 748 (947)
Q Consensus 670 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~-~~~~kl~DfGla~~~~~ 748 (947)
+++++|.+++..... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++. ++.+||+|||+++....
T Consensus 101 ~~~~~L~~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~ 175 (295)
T 2clq_A 101 VPGGSLSALLRSKWG--PLKDNEQTIGFYTKQILEGLKYLHD---NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG 175 (295)
T ss_dssp CSEEEHHHHHHHTTC--CCTTCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC
T ss_pred CCCCCHHHHHHhhcc--CCCccHHHHHHHHHHHHHHHHHHHh---CCEEccCCChhhEEEECCCCCEEEeecccccccCC
Confidence 999999999865422 2346788899999999999999997 89999999999999987 89999999999987654
Q ss_pred CCCcceeecccccccccCccccccCC--cCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHHH
Q 002255 749 NGKHSIETRLAGTFGYLAPEYAVTGR--VTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKA 826 (947)
Q Consensus 749 ~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 826 (947)
... ......||+.|+|||++.+.. ++.++||||||+++|||++|+.||......... .. .. ..
T Consensus 176 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~-~~-----------~~ 240 (295)
T 2clq_A 176 INP--CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAA-MF-KV-----------GM 240 (295)
T ss_dssp -------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHH-HH-HH-----------HH
T ss_pred CCC--cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHH-HH-hh-----------cc
Confidence 221 223457999999999987643 789999999999999999999999754322110 00 00 00
Q ss_pred hhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 827 IDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 827 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
...... ........+.+++.+||+.||++||++.|+++
T Consensus 241 ~~~~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 241 FKVHPE---IPESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp HCCCCC---CCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred cccccc---ccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 011111 11122356789999999999999999999976
No 214
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1.1e-37 Score=349.49 Aligned_cols=274 Identities=20% Similarity=0.320 Sum_probs=203.5
Q ss_pred cHHHHHHHhcCCCcCceecccCceEEEEEEEcCCcEEEEEEeccccc---------ChHHHHHHHHHHHHHHcCCCCCcc
Q 002255 581 SIQVLRNVTNNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVV---------SEKGFAEFKSEIAVLTKVRHRHLV 651 (947)
Q Consensus 581 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~---------~~~~~~~~~~E~~~l~~l~h~niv 651 (947)
..+++..+.++|++.+.||+|+||.||+|...+|+.||||++..... .....+.+.+|++++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 45778889999999999999999999999988899999999865422 223347899999999999999999
Q ss_pred eEEEEEEe-----CCeeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCc
Q 002255 652 GLLGYCLD-----GNERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSN 726 (947)
Q Consensus 652 ~l~~~~~~-----~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~N 726 (947)
++++++.. ....++||||+. |+|.+++.... ..+++..+..++.||+.||+|||+ .+|+||||||+|
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~N 164 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR----IVISPQHIQYFMYHILLGLHVLHE---AGVVHRDLHPGN 164 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGG
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHH---CcCEecCCChHH
Confidence 99999854 336799999997 68888886432 358999999999999999999997 799999999999
Q ss_pred EEEcCCCcEEEeecCcceecCCCCCcceeecccccccccCcccccc-CCcCcccccccHHHHHHHHHhCCCCCCccCccc
Q 002255 727 ILLGDDMRAKVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVT-GRVTTKVDVFSFGVILMELITGRKALDETQSED 805 (947)
Q Consensus 727 ill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~ 805 (947)
|+++.++.+||+|||+++...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+
T Consensus 165 Il~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~ 241 (362)
T 3pg1_A 165 ILLADNNDITICDFNLAREDTADA---NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYN 241 (362)
T ss_dssp EEECTTCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred EEEcCCCCEEEEecCccccccccc---ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHH
Confidence 999999999999999997544322 2234578999999998876 678999999999999999999999998755332
Q ss_pred hhhHHHHHHHhhc---------ChhhHHHHhhccCC-CChhc-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 806 SVHLVTWFRRMHI---------NKDTFRKAIDRTID-LDEET-----LASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 806 ~~~l~~~~~~~~~---------~~~~~~~~~~~~~~-~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
....+ +..... ........+..... ..... ......+.+|+.+||+.||++|||+.|+++
T Consensus 242 ~~~~i--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 242 QLNKI--VEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp HHHHH--HHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHH--HHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 22111 110000 01111122211111 01001 112345789999999999999999999976
No 215
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.6e-37 Score=334.06 Aligned_cols=249 Identities=30% Similarity=0.447 Sum_probs=196.2
Q ss_pred hcCCCcCceecccCceEEEEEEEc-CCcEEEEEEeccccc-ChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVV-SEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLV 666 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 666 (947)
.++|++.+.||+|+||.||+|... +|+.||||++..... .....+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 368999999999999999999886 799999999875421 123356789999999999999999999999999999999
Q ss_pred EEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceec
Q 002255 667 YEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 746 (947)
Q Consensus 667 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~ 746 (947)
|||+++++|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||++...
T Consensus 90 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~ 161 (276)
T 2h6d_A 90 MEYVSGGELFDYICKH-----GRVEEMEARRLFQQILSAVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMM 161 (276)
T ss_dssp EECCCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---HCSSCCCCCGGGEEECTTSCEEECCCCGGGCC
T ss_pred EeccCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChhhEEECCCCCEEEeeccccccc
Confidence 9999999999998653 247899999999999999999997 79999999999999999999999999999876
Q ss_pred CCCCCcceeecccccccccCccccccCCc-CcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHH
Q 002255 747 PDNGKHSIETRLAGTFGYLAPEYAVTGRV-TTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRK 825 (947)
Q Consensus 747 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 825 (947)
.... ......||+.|+|||.+.+..+ +.++||||||+++|||++|+.||....... . ...
T Consensus 162 ~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~---~-------------~~~ 222 (276)
T 2h6d_A 162 SDGE---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPT---L-------------FKK 222 (276)
T ss_dssp CC----------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHH---H-------------HHH
T ss_pred CCCc---ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH---H-------------HHH
Confidence 4432 1234578999999999987665 689999999999999999999997643211 1 111
Q ss_pred HhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 826 AIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
+.......+. .....+.+++.+|++.||++||++.|+++
T Consensus 223 ~~~~~~~~~~---~~~~~l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 223 IRGGVFYIPE---YLNRSVATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp HHHCCCCCCT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hhcCcccCch---hcCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 1111111111 12345789999999999999999999987
No 216
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1.2e-37 Score=343.10 Aligned_cols=254 Identities=25% Similarity=0.364 Sum_probs=198.1
Q ss_pred HHhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEeccccc------ChHHHHHHHHHHHHHHcCCCCCcceEEEEEEe
Q 002255 587 NVTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVV------SEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLD 659 (947)
Q Consensus 587 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~------~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 659 (947)
.+.++|.+.+.||+|+||.||+|... +++.||||++..... .......+.+|++++++++||||+++++++..
T Consensus 7 ~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 86 (322)
T 2ycf_A 7 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 86 (322)
T ss_dssp HHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEES
T ss_pred hhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcC
Confidence 45678999999999999999999875 588999999875432 11223468899999999999999999999876
Q ss_pred CCeeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCc---EE
Q 002255 660 GNERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR---AK 736 (947)
Q Consensus 660 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~---~k 736 (947)
++ .++||||+++++|.+++... ..+++..+..++.||+.||+|||+ ++|+||||||+||+++.++. +|
T Consensus 87 ~~-~~lv~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~k 157 (322)
T 2ycf_A 87 ED-YYIVLELMEGGELFDKVVGN-----KRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIK 157 (322)
T ss_dssp SS-EEEEEECCTTEETHHHHSTT-----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSSSCCEE
T ss_pred Cc-eEEEEecCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEecCCCCCeEE
Confidence 55 89999999999999988542 348899999999999999999997 89999999999999987654 99
Q ss_pred EeecCcceecCCCCCcceeecccccccccCccccc---cCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHH
Q 002255 737 VADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAV---TGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWF 813 (947)
Q Consensus 737 l~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~ 813 (947)
|+|||+++...... ......||+.|+|||++. ...++.++|||||||++|||++|+.||........ +...+
T Consensus 158 l~Dfg~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~~ 232 (322)
T 2ycf_A 158 ITDFGHSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS--LKDQI 232 (322)
T ss_dssp ECCCTTCEECCCCH---HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSC--HHHHH
T ss_pred EccCccceeccccc---ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHH--HHHHH
Confidence 99999998765421 223457999999999874 46789999999999999999999999976543221 11111
Q ss_pred HHhhcChhhHHHHhhccCCCChh-cHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 814 RRMHINKDTFRKAIDRTIDLDEE-TLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 814 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
........+. .......+.+++.+||+.||++||++.|+++
T Consensus 233 -------------~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 233 -------------TSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp -------------HHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -------------HhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 1111111111 1122356789999999999999999999976
No 217
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=4.8e-38 Score=342.92 Aligned_cols=253 Identities=23% Similarity=0.349 Sum_probs=198.8
Q ss_pred HhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEE
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLV 666 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 666 (947)
..++|++.+.||+|+||.||+|... +|+.||+|++... .....+.+.+|++++++++||||+++++++..++..++|
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 94 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIM 94 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCC--CHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEE
Confidence 4578999999999999999999886 5899999998754 334467889999999999999999999999999999999
Q ss_pred EEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceec
Q 002255 667 YEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 746 (947)
Q Consensus 667 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~ 746 (947)
|||+++++|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++...
T Consensus 95 ~e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 167 (302)
T 2j7t_A 95 IEFCPGGAVDAIMLELD----RGLTEPQIQVVCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKN 167 (302)
T ss_dssp EECCTTEEHHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCCHHHHHH
T ss_pred EEeCCCCcHHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEECCCCCEEEEECCCCccc
Confidence 99999999999886532 348899999999999999999997 79999999999999999999999999987533
Q ss_pred CCCCCcceeecccccccccCcccc-----ccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChh
Q 002255 747 PDNGKHSIETRLAGTFGYLAPEYA-----VTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKD 821 (947)
Q Consensus 747 ~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~ 821 (947)
... ........||+.|+|||++ ....++.++||||||+++|||++|+.||......+.
T Consensus 168 ~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--------------- 230 (302)
T 2j7t_A 168 LKT--LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV--------------- 230 (302)
T ss_dssp HHH--HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH---------------
T ss_pred ccc--ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHH---------------
Confidence 211 0112235789999999988 356789999999999999999999999976543211
Q ss_pred hHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 822 TFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
.....................+.+++.+|++.||++||++.++++
T Consensus 231 -~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 231 -LLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp -HHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred -HHHHhccCCcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 111111111111111222356889999999999999999999866
No 218
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=2.8e-37 Score=345.94 Aligned_cols=266 Identities=23% Similarity=0.363 Sum_probs=203.9
Q ss_pred hcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeC-----Ce
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDG-----NE 662 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 662 (947)
.++|++.++||+|+||.||+|... +++.||||++.... .....+.+.+|++++++++||||+++++++... ..
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT-CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEecccc-CcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 468999999999999999999875 68899999987532 445567899999999999999999999999754 46
Q ss_pred eEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCc
Q 002255 663 RLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGL 742 (947)
Q Consensus 663 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGl 742 (947)
.++||||+. |+|.+++.. ..+++.++..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 105 ~~iv~e~~~-~~L~~~l~~------~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 174 (364)
T 3qyz_A 105 VYIVQDLME-TDLYKLLKT------QHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGL 174 (364)
T ss_dssp EEEEEECCS-EEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEEcccC-cCHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChHhEEECCCCCEEEEeCcc
Confidence 899999996 699988854 238899999999999999999997 8999999999999999999999999999
Q ss_pred ceecCCCCCcc-eeecccccccccCcccccc-CCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcCh
Q 002255 743 VRLAPDNGKHS-IETRLAGTFGYLAPEYAVT-GRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINK 820 (947)
Q Consensus 743 a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~ 820 (947)
++......... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+....+... .....
T Consensus 175 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~--~~~~~ 252 (364)
T 3qyz_A 175 ARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI--LGSPS 252 (364)
T ss_dssp CEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHH--HCSCC
T ss_pred eEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHH--hCCCC
Confidence 98765432211 1234579999999998654 45899999999999999999999999876554432221111 00000
Q ss_pred -hh--------HHHHhhccCCCChhc-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 821 -DT--------FRKAIDRTIDLDEET-----LASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 821 -~~--------~~~~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
+. ............... ......+.+|+.+||+.||++|||+.|+++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 253 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp HHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00 011111100000000 112356789999999999999999999986
No 219
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.7e-37 Score=350.14 Aligned_cols=266 Identities=21% Similarity=0.299 Sum_probs=198.0
Q ss_pred HHHhcCCCcCceecccCceEEEEEEE-cCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeC----
Q 002255 586 RNVTNNFSEENVLGRGGFGTVYKGEL-HDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDG---- 660 (947)
Q Consensus 586 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~---- 660 (947)
+...++|++.+.||+|+||.||+|.. .+|+.||||++..... ...+|+++++.++|||||++++++...
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 76 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR------YKNRELDIMKVLDHVNIIKLVDYFYTTGDEE 76 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT------SCCHHHHHHTTCCCTTBCCEEEEEEEC----
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc------hHHHHHHHHHHcCCCCccchhheeeecCccc
Confidence 34567899999999999999999986 4799999999865421 224699999999999999999998543
Q ss_pred ----------------------------------CeeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHH
Q 002255 661 ----------------------------------NERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGV 706 (947)
Q Consensus 661 ----------------------------------~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L 706 (947)
...++||||++ |+|.+.+...... ...+++..+..++.||++||
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~-~~~l~~~~~~~i~~qi~~aL 154 (383)
T 3eb0_A 77 PKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRS-GRSIPMNLISIYIYQLFRAV 154 (383)
T ss_dssp ---------------------------------CCEEEEEECCCS-EEHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHH
Confidence 34789999997 6888877653322 24589999999999999999
Q ss_pred HHHhhccCCCeeecCCCCCcEEEc-CCCcEEEeecCcceecCCCCCcceeecccccccccCccccccC-CcCcccccccH
Q 002255 707 EYLHGLAHQSFIHRDLKPSNILLG-DDMRAKVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTG-RVTTKVDVFSF 784 (947)
Q Consensus 707 ~~LH~~~~~~ivHrDlkp~Nill~-~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSl 784 (947)
+|||+ .+|+||||||+||+++ .++.+||+|||+++....... .....||+.|+|||++.+. .++.++||||+
T Consensus 155 ~~LH~---~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Diwsl 228 (383)
T 3eb0_A 155 GFIHS---LGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP---SVAYICSRFYRAPELMLGATEYTPSIDLWSI 228 (383)
T ss_dssp HHHHT---TTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC---CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHH
T ss_pred HHHHH---CcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC---CcCcccCCCccCHHHhcCCCCCCcchhhhhH
Confidence 99996 8999999999999998 689999999999987654322 2345789999999988764 48999999999
Q ss_pred HHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHHHhhccCC---CC---h------hcHHHHHHHHHHHHHhc
Q 002255 785 GVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKAIDRTID---LD---E------ETLASISTVADLAGHCC 852 (947)
Q Consensus 785 Gvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~---~------~~~~~~~~l~~li~~cl 852 (947)
||++|||++|+.||.+....+.. ...+..............++... +. . ........+.+|+.+||
T Consensus 229 G~il~ell~g~~pf~~~~~~~~~--~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L 306 (383)
T 3eb0_A 229 GCVFGELILGKPLFSGETSIDQL--VRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQIL 306 (383)
T ss_dssp HHHHHHHHHSSCSSCCSSHHHHH--HHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHC
T ss_pred HHHHHHHHhCCCCCCCCChHHHH--HHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHc
Confidence 99999999999999875543322 22222111111111111111100 00 0 00112345789999999
Q ss_pred ccCCCCCCCHHHHHH
Q 002255 853 AREPYQRPDMGHVVN 867 (947)
Q Consensus 853 ~~dP~~RPs~~evl~ 867 (947)
+.||++|||+.|+++
T Consensus 307 ~~dP~~R~t~~e~l~ 321 (383)
T 3eb0_A 307 RYEPDLRINPYEAMA 321 (383)
T ss_dssp CSSGGGSCCHHHHHT
T ss_pred cCChhhCCCHHHHhc
Confidence 999999999999986
No 220
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=2.2e-37 Score=334.97 Aligned_cols=256 Identities=27% Similarity=0.364 Sum_probs=208.5
Q ss_pred HHHHHhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCe
Q 002255 584 VLRNVTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNE 662 (947)
Q Consensus 584 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 662 (947)
......++|++.+.||+|+||.||+|... +++.||||++..........+.+.+|++++++++||||+++++++.+.+.
T Consensus 16 ~~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 95 (287)
T 2wei_A 16 FQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSS 95 (287)
T ss_dssp HTHHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred HHHHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCe
Confidence 34567789999999999999999999876 68999999997665555566789999999999999999999999999999
Q ss_pred eEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCC---CcEEEee
Q 002255 663 RLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD---MRAKVAD 739 (947)
Q Consensus 663 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~---~~~kl~D 739 (947)
.++||||+++++|.+++... ..+++.+++.++.||+.||+|||+ .+|+||||||+||+++.+ +.+||+|
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIlv~~~~~~~~~kL~D 167 (287)
T 2wei_A 96 FYIVGELYTGGELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIID 167 (287)
T ss_dssp EEEEECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECS
T ss_pred EEEEEEccCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChhhEEEecCCCcccEEEec
Confidence 99999999999999988653 248899999999999999999997 799999999999999754 4799999
Q ss_pred cCcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcC
Q 002255 740 FGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHIN 819 (947)
Q Consensus 740 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~ 819 (947)
||+++....... .....||+.|+|||.+.+ .++.++||||||+++|+|++|+.||......+.
T Consensus 168 fg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~------------- 230 (287)
T 2wei_A 168 FGLSTCFQQNTK---MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDI------------- 230 (287)
T ss_dssp TTGGGTBCCCSS---CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-------------
T ss_pred cCcceeecCCCc---cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHH-------------
Confidence 999886644321 223468999999998765 589999999999999999999999976542211
Q ss_pred hhhHHHHhhccCCCCh-hcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 820 KDTFRKAIDRTIDLDE-ETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 820 ~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
...+......... ........+.+++.+|++.||++||++.|+++
T Consensus 231 ---~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 231 ---LKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp ---HHHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ---HHHHHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 1111122221111 11123456889999999999999999999987
No 221
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1.1e-37 Score=347.51 Aligned_cols=254 Identities=22% Similarity=0.344 Sum_probs=204.6
Q ss_pred hcCCCcCceecccCceEEEEEEEcCCcEEEEEEecccccChH---------------HHHHHHHHHHHHHcCCCCCcceE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEK---------------GFAEFKSEIAVLTKVRHRHLVGL 653 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~---------------~~~~~~~E~~~l~~l~h~niv~l 653 (947)
.++|++.+.||+|+||.||+|.. +|+.||||++........ ..+.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46899999999999999999988 899999999875432211 12789999999999999999999
Q ss_pred EEEEEeCCeeEEEEEecCCCchhhh------hhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcE
Q 002255 654 LGYCLDGNERLLVYEYMPQGTLSRH------LFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNI 727 (947)
Q Consensus 654 ~~~~~~~~~~~lV~e~~~~gsL~~~------l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Ni 727 (947)
++++.+.+..++||||+++|+|.++ +... ....+++..+..++.|++.||+|||+ ..+|+||||||+||
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~--~~~i~H~dl~p~Ni 183 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKN---YTCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNI 183 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSS---SCCCCCHHHHHHHHHHHHHHHHHHHH--TSCEECCCCCGGGE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhc---cccCCCHHHHHHHHHHHHHHHHHHhc--cCCEeecCCChHhE
Confidence 9999999999999999999999998 4321 12568999999999999999999995 37999999999999
Q ss_pred EEcCCCcEEEeecCcceecCCCCCcceeecccccccccCccccccC-CcCc-ccccccHHHHHHHHHhCCCCCCccCccc
Q 002255 728 LLGDDMRAKVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTG-RVTT-KVDVFSFGVILMELITGRKALDETQSED 805 (947)
Q Consensus 728 ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~DvwSlGvil~elltg~~p~~~~~~~~ 805 (947)
+++.++.+||+|||+++..... ......||+.|+|||++.+. .++. ++||||||+++|||++|+.||.......
T Consensus 184 l~~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~ 259 (348)
T 2pml_X 184 LMDKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLV 259 (348)
T ss_dssp EECTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSH
T ss_pred EEcCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHH
Confidence 9999999999999999876442 23446799999999999877 6666 9999999999999999999998654321
Q ss_pred hhhHHHHHHHhhcChhhHHHHhhccCCCCh----------------hcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 806 SVHLVTWFRRMHINKDTFRKAIDRTIDLDE----------------ETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 806 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
.... .+......... ........+.+++.+||+.||++||++.|+++
T Consensus 260 --~~~~-------------~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 260 --ELFN-------------NIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp --HHHH-------------HHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred --HHHH-------------HHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1111 11111111110 00223356889999999999999999999977
No 222
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=4.3e-37 Score=334.66 Aligned_cols=254 Identities=26% Similarity=0.327 Sum_probs=205.6
Q ss_pred HHhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEeccccc---C----hHHHHHHHHHHHHHHcCC-CCCcceEEEEE
Q 002255 587 NVTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVV---S----EKGFAEFKSEIAVLTKVR-HRHLVGLLGYC 657 (947)
Q Consensus 587 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~----~~~~~~~~~E~~~l~~l~-h~niv~l~~~~ 657 (947)
...++|++.+.||+|+||.||+|..+ +|+.||||++..... . ....+.+.+|+++++++. ||||+++++++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 34578999999999999999999875 689999999975421 1 223467889999999996 99999999999
Q ss_pred EeCCeeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEE
Q 002255 658 LDGNERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKV 737 (947)
Q Consensus 658 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl 737 (947)
..++..++||||+++++|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl 165 (298)
T 1phk_A 94 ETNTFFFLVFDLMKKGELFDYLTEK-----VTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKL 165 (298)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEE
T ss_pred ccCCeEEEEEeccCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEcCCCcEEE
Confidence 9999999999999999999998653 348899999999999999999997 89999999999999999999999
Q ss_pred eecCcceecCCCCCcceeecccccccccCccccc------cCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHH
Q 002255 738 ADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAV------TGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVT 811 (947)
Q Consensus 738 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~ 811 (947)
+|||+++....... .....||+.|+|||++. ...++.++||||||+++|||++|+.||.......
T Consensus 166 ~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------ 236 (298)
T 1phk_A 166 TDFGFSCQLDPGEK---LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML------ 236 (298)
T ss_dssp CCCTTCEECCTTCC---BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------
T ss_pred ecccchhhcCCCcc---cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHH------
Confidence 99999987654322 23457999999999885 4568899999999999999999999997643211
Q ss_pred HHHHhhcChhhHHHHhhccCCCCh-hcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 812 WFRRMHINKDTFRKAIDRTIDLDE-ETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 812 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
....+......... ........+.+++.+||+.||++||++.|+++
T Consensus 237 ----------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 237 ----------MLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp ----------HHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred ----------HHHHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 11122222222111 11223456889999999999999999999876
No 223
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.3e-37 Score=353.88 Aligned_cols=279 Identities=25% Similarity=0.357 Sum_probs=188.3
Q ss_pred HhcCCCc-CceecccCceEEEEEEEc---CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEe--CC
Q 002255 588 VTNNFSE-ENVLGRGGFGTVYKGELH---DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLD--GN 661 (947)
Q Consensus 588 ~~~~~~~-~~~lg~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~ 661 (947)
+.+.|++ .++||+|+||.||+|+++ +++.||||++...... ..+.+|+.++++++|||||++++++.. +.
T Consensus 18 ~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 93 (405)
T 3rgf_A 18 VEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGIS----MSACREIALLRELKHPNVISLQKVFLSHADR 93 (405)
T ss_dssp HHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCC----HHHHHHHHHHHHCCCTTBCCCCEEEEETTTT
T ss_pred hhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCC----HHHHHHHHHHHhcCCCCeeeEeeEEecCCCC
Confidence 3455666 568999999999999876 5788999999755322 467889999999999999999999964 67
Q ss_pred eeEEEEEecCCCchhhhhhccccc----CCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEE----cCCC
Q 002255 662 ERLLVYEYMPQGTLSRHLFNRKEE----GLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL----GDDM 733 (947)
Q Consensus 662 ~~~lV~e~~~~gsL~~~l~~~~~~----~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill----~~~~ 733 (947)
..++||||+. |+|.+++...... ....+++..+..++.||+.||+|||+ .+|+||||||+|||+ +.++
T Consensus 94 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~Dlkp~NIll~~~~~~~~ 169 (405)
T 3rgf_A 94 KVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERG 169 (405)
T ss_dssp EEEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECCSSTTTT
T ss_pred eEEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeCCCcCHHHeEEecCCCCCC
Confidence 8999999995 5888877543211 12348899999999999999999997 899999999999999 6789
Q ss_pred cEEEeecCcceecCCCCCc-ceeecccccccccCccccccC-CcCcccccccHHHHHHHHHhCCCCCCccCccc------
Q 002255 734 RAKVADFGLVRLAPDNGKH-SIETRLAGTFGYLAPEYAVTG-RVTTKVDVFSFGVILMELITGRKALDETQSED------ 805 (947)
Q Consensus 734 ~~kl~DfGla~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~p~~~~~~~~------ 805 (947)
.+||+|||+++........ .......||+.|+|||++.+. .++.++|||||||++|||++|+.||.......
T Consensus 170 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~ 249 (405)
T 3rgf_A 170 RVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPY 249 (405)
T ss_dssp CEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCC
T ss_pred cEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccc
Confidence 9999999999876542211 223346799999999998774 58999999999999999999999997554321
Q ss_pred -hhhHHHHHHHhhcChh-------------hHHHHhh-ccCCCChhc-------HHHHHHHHHHHHHhcccCCCCCCCHH
Q 002255 806 -SVHLVTWFRRMHINKD-------------TFRKAID-RTIDLDEET-------LASISTVADLAGHCCAREPYQRPDMG 863 (947)
Q Consensus 806 -~~~l~~~~~~~~~~~~-------------~~~~~~~-~~~~~~~~~-------~~~~~~l~~li~~cl~~dP~~RPs~~ 863 (947)
...+...+........ .+...+. ......... ......+.+|+.+||+.||.+|||+.
T Consensus 250 ~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~ 329 (405)
T 3rgf_A 250 HHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSE 329 (405)
T ss_dssp CHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHH
T ss_pred hHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHH
Confidence 1111111111110000 0000000 000000000 00024577999999999999999999
Q ss_pred HHHHHHHhhhhhhCCCC
Q 002255 864 HVVNVLSSLAELWKPAE 880 (947)
Q Consensus 864 evl~~L~~l~~~~~~~~ 880 (947)
|+++ ++|....
T Consensus 330 e~L~------hp~f~~~ 340 (405)
T 3rgf_A 330 QAMQ------DPYFLED 340 (405)
T ss_dssp HHHT------SGGGTSS
T ss_pred HHhc------ChhhccC
Confidence 9976 5665443
No 224
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=3.7e-38 Score=343.96 Aligned_cols=266 Identities=23% Similarity=0.381 Sum_probs=186.4
Q ss_pred HhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEE
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLV 666 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 666 (947)
..++|++.+.||+|+||.||+|... +++.||||++.... .....+++.+|+.++++++||||+++++++..++..++|
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEK-CQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV 91 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC-----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhh-cchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence 3578999999999999999999754 68999999986543 233456788999999999999999999999999999999
Q ss_pred EEecCCCchhhhhhcccc---cCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcc
Q 002255 667 YEYMPQGTLSRHLFNRKE---EGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLV 743 (947)
Q Consensus 667 ~e~~~~gsL~~~l~~~~~---~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla 743 (947)
|||+++++|.+++..... .....+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 168 (303)
T 2vwi_A 92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK---NGQIHRDVKAGNILLGEDGSVQIADFGVS 168 (303)
T ss_dssp EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEECCCHHH
T ss_pred ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCCChhhEEEcCCCCEEEEeccch
Confidence 999999999998864221 122458999999999999999999997 79999999999999999999999999998
Q ss_pred eecCCCCCc---ceeecccccccccCcccccc-CCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcC
Q 002255 744 RLAPDNGKH---SIETRLAGTFGYLAPEYAVT-GRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHIN 819 (947)
Q Consensus 744 ~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~ 819 (947)
+........ .......||+.|+|||++.+ ..++.++||||||+++|||++|+.||........... .. ...
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~--~~---~~~ 243 (303)
T 2vwi_A 169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLML--TL---QND 243 (303)
T ss_dssp HHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHH--HH---TSS
T ss_pred heeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHH--Hh---ccC
Confidence 765443211 12234579999999998865 5689999999999999999999999976553322110 00 000
Q ss_pred hhhHH-HHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 820 KDTFR-KAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 820 ~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
..... ...+.. ........+.+++.+||+.||++||++.|+++
T Consensus 244 ~~~~~~~~~~~~-----~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 244 PPSLETGVQDKE-----MLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp CCCTTC-----C-----CCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CCccccccccch-----hhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 00000 000000 00112245789999999999999999999976
No 225
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=4.1e-37 Score=345.35 Aligned_cols=262 Identities=22% Similarity=0.354 Sum_probs=201.5
Q ss_pred HhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCee---
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNER--- 663 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~--- 663 (947)
+.++|...+.||+|+||.||+|... +|+.||||++..........+.+.+|+.++++++||||+++++++...+..
T Consensus 40 l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 119 (371)
T 4exu_A 40 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred ccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence 3578999999999999999999875 689999999987655666678899999999999999999999999877654
Q ss_pred ---EEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeec
Q 002255 664 ---LLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADF 740 (947)
Q Consensus 664 ---~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~Df 740 (947)
++||||+. ++|.+++. ..+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 120 ~~~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kL~Df 188 (371)
T 4exu_A 120 YDFYLVMPFMQ-TDLQKIMG-------MEFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDF 188 (371)
T ss_dssp CCCEEEEECCC-EEHHHHTT-------SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECST
T ss_pred eeEEEEEcccc-ccHHHHhh-------cCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCcCHHHeEECCCCCEEEEec
Confidence 99999996 68887772 238899999999999999999997 79999999999999999999999999
Q ss_pred CcceecCCCCCcceeecccccccccCcccccc-CCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcC
Q 002255 741 GLVRLAPDNGKHSIETRLAGTFGYLAPEYAVT-GRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHIN 819 (947)
Q Consensus 741 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~ 819 (947)
|+++..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+.... ........
T Consensus 189 g~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~--i~~~~~~~ 261 (371)
T 4exu_A 189 GLARHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQ--ILKVTGVP 261 (371)
T ss_dssp TCC-------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH--HHHHHCCC
T ss_pred CcccccccC-----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHH--HHHHhCCC
Confidence 999865432 234578999999999877 6789999999999999999999999986553322211 11111110
Q ss_pred h---------hhHHHHhhccCCCChh-----cHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 820 K---------DTFRKAIDRTIDLDEE-----TLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 820 ~---------~~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
. ......+......... .......+.+|+.+||+.||++||++.|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 262 GTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp CHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred cHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 0 0111111111110000 0112356889999999999999999999976
No 226
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=5e-37 Score=340.70 Aligned_cols=263 Identities=22% Similarity=0.334 Sum_probs=204.5
Q ss_pred hcCCCcCceecccCceEEEEEEE-c-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCC------CcceEEEEEEeC
Q 002255 589 TNNFSEENVLGRGGFGTVYKGEL-H-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHR------HLVGLLGYCLDG 660 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~-~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~------niv~l~~~~~~~ 660 (947)
.++|++.+.||+|+||.||+|.. + +|+.||||+++.. ....+.+.+|+++++.++|+ +++++++++...
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~ 89 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV---DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHH 89 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEET
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC---CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccC
Confidence 46899999999999999999987 3 6889999998743 44567788999999999765 499999999999
Q ss_pred CeeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcC---------
Q 002255 661 NERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD--------- 731 (947)
Q Consensus 661 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~--------- 731 (947)
+..++||||+ +++|.+++..... ..+++.++..++.||+.||+|||+ ++|+||||||+||+++.
T Consensus 90 ~~~~lv~e~~-~~~l~~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~~ 162 (339)
T 1z57_A 90 GHICIVFELL-GLSTYDFIKENGF---LPFRLDHIRKMAYQICKSVNFLHS---NKLTHTDLKPENILFVQSDYTEAYNP 162 (339)
T ss_dssp TEEEEEEECC-CCBHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCCCEEEEEC-
T ss_pred CcEEEEEcCC-CCCHHHHHHhcCC---CCCcHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeccccccccCC
Confidence 9999999999 8999999865432 358899999999999999999997 89999999999999987
Q ss_pred ----------CCcEEEeecCcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCcc
Q 002255 732 ----------DMRAKVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDET 801 (947)
Q Consensus 732 ----------~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~ 801 (947)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 163 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 237 (339)
T 1z57_A 163 KIKRDERTLINPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTH 237 (339)
T ss_dssp ---CEEEEESCCCEEECCCSSCEETTSC-----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccCCCceEeeCcccccCccc-----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 678999999999875432 23457999999999999989999999999999999999999999865
Q ss_pred CccchhhHHHHHHHhhcChhhHH--------------------------HHhhccCCCChhcHHHHHHHHHHHHHhcccC
Q 002255 802 QSEDSVHLVTWFRRMHINKDTFR--------------------------KAIDRTIDLDEETLASISTVADLAGHCCARE 855 (947)
Q Consensus 802 ~~~~~~~l~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 855 (947)
...+........... ....... ....+..............+.+++.+||+.|
T Consensus 238 ~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d 316 (339)
T 1z57_A 238 DSKEHLAMMERILGP-LPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYD 316 (339)
T ss_dssp CHHHHHHHHHHHHCS-CCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSS
T ss_pred ChHHHHHHHHHHhCC-CCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcC
Confidence 543322221111100 0000000 0000000001112234567889999999999
Q ss_pred CCCCCCHHHHHH
Q 002255 856 PYQRPDMGHVVN 867 (947)
Q Consensus 856 P~~RPs~~evl~ 867 (947)
|++|||+.|+++
T Consensus 317 P~~Rpt~~ell~ 328 (339)
T 1z57_A 317 PAKRITLREALK 328 (339)
T ss_dssp TTTSCCHHHHTT
T ss_pred cccccCHHHHhc
Confidence 999999999976
No 227
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=2.2e-37 Score=370.80 Aligned_cols=258 Identities=25% Similarity=0.397 Sum_probs=206.0
Q ss_pred hcCCCcCceecccCceEEEEEEEcC----CcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELHD----GTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERL 664 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 664 (947)
.++|++.+.||+|+||.||+|.+.. +..||||+++.. ......+.+.+|+.++++++||||+++++++. ++..+
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~ 466 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC-TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 466 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSST-TCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCE
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceE
Confidence 4678999999999999999998742 567999998754 24555678999999999999999999999985 56689
Q ss_pred EEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcce
Q 002255 665 LVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 744 (947)
Q Consensus 665 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~ 744 (947)
+||||+++|+|.+++.... ..+++..++.++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++
T Consensus 467 lv~E~~~~g~L~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDikp~NILl~~~~~vkL~DFG~a~ 539 (656)
T 2j0j_A 467 IIMELCTLGELRSFLQVRK----FSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSR 539 (656)
T ss_dssp EEEECCTTCBHHHHHHHTT----TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCCCC
T ss_pred EEEEcCCCCcHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchHhEEEeCCCCEEEEecCCCe
Confidence 9999999999999996532 348899999999999999999997 899999999999999999999999999998
Q ss_pred ecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhcChhhH
Q 002255 745 LAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELIT-GRKALDETQSEDSVHLVTWFRRMHINKDTF 823 (947)
Q Consensus 745 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 823 (947)
....... .......+|+.|+|||++.+..++.++|||||||++|||++ |..||.+....+. ..
T Consensus 540 ~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~---~~------------ 603 (656)
T 2j0j_A 540 YMEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV---IG------------ 603 (656)
T ss_dssp SCCC-----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH---HH------------
T ss_pred ecCCCcc-eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHH---HH------------
Confidence 7654322 22234467889999999998899999999999999999997 9999976543221 11
Q ss_pred HHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 002255 824 RKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAE 874 (947)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~ 874 (947)
.+..... ...+......+.+++.+||+.||++||++.|+++.|+.+.+
T Consensus 604 -~i~~~~~--~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~ 651 (656)
T 2j0j_A 604 -RIENGER--LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 651 (656)
T ss_dssp -HHHHTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -HHHcCCC--CCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 1111110 01111233568899999999999999999999999998864
No 228
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.9e-37 Score=352.14 Aligned_cols=261 Identities=23% Similarity=0.271 Sum_probs=201.8
Q ss_pred hcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCC--------CCCcceEEEEEE-
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVR--------HRHLVGLLGYCL- 658 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~~~~~- 658 (947)
.++|++.++||+|+||.||+|... +++.||||++... ....+.+.+|++++++++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~ 112 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA---EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKI 112 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC---CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceee
Confidence 478999999999999999999865 6889999999743 445678899999999995 788999999987
Q ss_pred ---eCCeeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCC-CeeecCCCCCcEEEcCCC-
Q 002255 659 ---DGNERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQ-SFIHRDLKPSNILLGDDM- 733 (947)
Q Consensus 659 ---~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~-~ivHrDlkp~Nill~~~~- 733 (947)
.+...++||||+ ++++.+++..... ..+++..+..++.||+.||+|||+ + +|+||||||+|||++.++
T Consensus 113 ~~~~~~~~~lv~e~~-~~~l~~~~~~~~~---~~~~~~~~~~i~~qi~~aL~~lH~---~~givHrDikp~NIll~~~~~ 185 (397)
T 1wak_A 113 SGVNGTHICMVFEVL-GHHLLKWIIKSNY---QGLPLPCVKKIIQQVLQGLDYLHT---KCRIIHTDIKPENILLSVNEQ 185 (397)
T ss_dssp EETTEEEEEEEECCC-CCBHHHHHHHTTT---SCCCHHHHHHHHHHHHHHHHHHHH---TTCEECCCCSGGGEEECCCHH
T ss_pred cCCCCceEEEEEecc-CccHHHHHHhccc---CCCCHHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHeeEeccch
Confidence 456789999999 6666666654322 358999999999999999999997 6 999999999999999775
Q ss_pred ------------------------------------------------cEEEeecCcceecCCCCCcceeeccccccccc
Q 002255 734 ------------------------------------------------RAKVADFGLVRLAPDNGKHSIETRLAGTFGYL 765 (947)
Q Consensus 734 ------------------------------------------------~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~ 765 (947)
.+||+|||+++..... .....||+.|+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt~~y~ 260 (397)
T 1wak_A 186 YIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQTRQYR 260 (397)
T ss_dssp HHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSCGGGC
T ss_pred hhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCCCCccc
Confidence 8999999999876442 23357999999
Q ss_pred CccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhh---HHHHHHHh-hcChhhH------------------
Q 002255 766 APEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVH---LVTWFRRM-HINKDTF------------------ 823 (947)
Q Consensus 766 aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~---l~~~~~~~-~~~~~~~------------------ 823 (947)
|||++.+..++.++|||||||++|||++|+.||......+... ....+... .......
T Consensus 261 aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 340 (397)
T 1wak_A 261 SLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLK 340 (397)
T ss_dssp CHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBS
T ss_pred CChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccc
Confidence 9999999899999999999999999999999997655432211 11111111 0000000
Q ss_pred ----------HHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 824 ----------RKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 824 ----------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
.+.+.... .........+.+|+.+||+.||++|||++|+++
T Consensus 341 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 341 HITKLKPWGLFEVLVEKY---EWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp SCCCCCCCCHHHHHHHTS---CCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred cccccCCcchhHhhhhhc---ccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 00111111 112345567889999999999999999999976
No 229
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.8e-37 Score=340.75 Aligned_cols=253 Identities=24% Similarity=0.376 Sum_probs=196.1
Q ss_pred HHhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcC-CCCCcceEEEEEEe-----
Q 002255 587 NVTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKV-RHRHLVGLLGYCLD----- 659 (947)
Q Consensus 587 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~----- 659 (947)
...++|++.+.||+|+||.||+|+.. +|+.||||++.... ...+.+.+|+.+++++ +||||+++++++..
T Consensus 21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~ 97 (326)
T 2x7f_A 21 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG---DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG 97 (326)
T ss_dssp CCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--C
T ss_pred CCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc---ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCcc
Confidence 45678999999999999999999874 68999999987542 2346788999999999 79999999999987
Q ss_pred -CCeeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEe
Q 002255 660 -GNERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVA 738 (947)
Q Consensus 660 -~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~ 738 (947)
.+..++||||+++|+|.+++..... ..+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~kl~ 171 (326)
T 2x7f_A 98 MDDQLWLVMEFCGAGSVTDLIKNTKG---NTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLV 171 (326)
T ss_dssp CCCEEEEEEECCTTEEHHHHHHHSGG---GCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEEC
T ss_pred ccceEEEEEEcCCCCcHHHHHHhccc---CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCcHHHEEEcCCCCEEEe
Confidence 4678999999999999999976432 347889999999999999999997 799999999999999999999999
Q ss_pred ecCcceecCCCCCcceeecccccccccCccccc-----cCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHH
Q 002255 739 DFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAV-----TGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWF 813 (947)
Q Consensus 739 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~ 813 (947)
|||++........ ......||+.|+|||++. +..++.++|||||||++|||++|+.||......... .
T Consensus 172 Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~---~-- 244 (326)
T 2x7f_A 172 DFGVSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRAL---F-- 244 (326)
T ss_dssp CCTTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHH---H--
T ss_pred eCcCceecCcCcc--ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHH---H--
Confidence 9999886543211 123457999999999986 567899999999999999999999999765432111 0
Q ss_pred HHhhcChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 814 RRMHINKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 814 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
.+...... ..........+.+++.+||+.||++||++.++++
T Consensus 245 -----------~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 245 -----------LIPRNPAP-RLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp -----------HHHHSCCC-CCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred -----------HhhcCccc-cCCccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 01110000 0001112346789999999999999999999977
No 230
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=2.7e-37 Score=340.97 Aligned_cols=268 Identities=24% Similarity=0.360 Sum_probs=201.7
Q ss_pred HhcCCCcCceecccCceEEEEEEE--cCCcEEEEEEecccccChHHHHHHHHHHHHHHcC---CCCCcceEEEEEE----
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGEL--HDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKV---RHRHLVGLLGYCL---- 658 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~--~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~---- 658 (947)
+.++|++.+.||+|+||.||+|.. .+|+.||+|++............+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 457899999999999999999987 3688999999876543333334566777777766 8999999999987
Q ss_pred -eCCeeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEE
Q 002255 659 -DGNERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKV 737 (947)
Q Consensus 659 -~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl 737 (947)
.....++||||+. |+|.+++..... ..+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~---~gi~H~dlkp~Nili~~~~~~kl 161 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPE---PGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKL 161 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCT---TCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEE
T ss_pred CCCceEEEEEecCC-CCHHHHHHhccc---CCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHHHeEEcCCCCEEE
Confidence 4567899999997 699999865432 348899999999999999999997 89999999999999999999999
Q ss_pred eecCcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhh
Q 002255 738 ADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMH 817 (947)
Q Consensus 738 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~ 817 (947)
+|||+++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......+... .......
T Consensus 162 ~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~--~i~~~~~ 236 (326)
T 1blx_A 162 ADFGLARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLG--KILDVIG 236 (326)
T ss_dssp CSCCSCCCCCGG---GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH--HHHHHHC
T ss_pred ecCcccccccCC---CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHH--HHHHHcC
Confidence 999999865432 12334578999999999998899999999999999999999999998654322211 1111100
Q ss_pred cC-hhhHHH-------HhhccC--CCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 818 IN-KDTFRK-------AIDRTI--DLDEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 818 ~~-~~~~~~-------~~~~~~--~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
.. ...+.. .+.... ............+.+++.+||+.||++||++.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 237 LPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp CCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00 000000 000000 000011122356789999999999999999999975
No 231
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=7.7e-38 Score=351.53 Aligned_cols=255 Identities=10% Similarity=0.060 Sum_probs=183.3
Q ss_pred cCCCcCceecccCceEEEEEEEc-CCcEEEEEEeccccc-ChHHHHHHHHHHHHHHcC--CCCCcceEE-------EEEE
Q 002255 590 NNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVV-SEKGFAEFKSEIAVLTKV--RHRHLVGLL-------GYCL 658 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l--~h~niv~l~-------~~~~ 658 (947)
.+|...+.||+|+||.||+|.+. +|+.||||++..... .....+.+.+|+.+++.+ +||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 45888999999999999999875 789999999987643 234456778885544444 699988755 5554
Q ss_pred eC-----------------CeeEEEEEecCCCchhhhhhcccccCCCcccHHHH------HHHHHHHHHHHHHHhhccCC
Q 002255 659 DG-----------------NERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRR------LTIALDVARGVEYLHGLAHQ 715 (947)
Q Consensus 659 ~~-----------------~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~------~~i~~~i~~~L~~LH~~~~~ 715 (947)
.. ...++||||++ |+|.+++..... .+.+..+ ..++.||+.||+|||+ +
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~----~~~~~~~~~~~vk~~i~~qi~~aL~~LH~---~ 213 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF----VYVFRGDEGILALHILTAQLIRLAANLQS---K 213 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH----SCCCCHHHHHHHHHHHHHHHHHHHHHHHH---T
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc----ccchhhhhhhhhHHHHHHHHHHHHHHHHH---C
Confidence 33 33799999998 899999976432 2344445 7788999999999997 8
Q ss_pred CeeecCCCCCcEEEcCCCcEEEeecCcceecCCCCCcceeecccccccccCcccccc--CCcCcccccccHHHHHHHHHh
Q 002255 716 SFIHRDLKPSNILLGDDMRAKVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVT--GRVTTKVDVFSFGVILMELIT 793 (947)
Q Consensus 716 ~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGvil~ellt 793 (947)
+|+||||||+|||++.++.+||+|||+++..... .....||+.|+|||++.+ ..++.++|||||||++|||++
T Consensus 214 ~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~ellt 288 (371)
T 3q60_A 214 GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR-----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWC 288 (371)
T ss_dssp TEEETTCSGGGEEECTTSCEEECCGGGEEETTCE-----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHH
T ss_pred CCccCcCCHHHEEECCCCCEEEEecceeeecCCC-----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHh
Confidence 9999999999999999999999999999876431 123467799999999987 679999999999999999999
Q ss_pred CCCCCCccCccchhhHHHHHHHhhcChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 794 GRKALDETQSEDSVHLVTWFRRMHINKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 794 g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
|+.||........... ................ ........+.+|+.+||+.||++||++.|+++
T Consensus 289 g~~Pf~~~~~~~~~~~---------~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 289 LFLPFGLVTPGIKGSW---------KRPSLRVPGTDSLAFG-SCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp SSCSTTBCCTTCTTCC---------CBCCTTSCCCCSCCCT-TSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCCCCCCcCcccccch---------hhhhhhhccccccchh-hccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 9999987643211100 0000000000111111 11123456889999999999999999999975
No 232
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=4.5e-37 Score=350.28 Aligned_cols=261 Identities=23% Similarity=0.356 Sum_probs=195.3
Q ss_pred cCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeC----C--e
Q 002255 590 NNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDG----N--E 662 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----~--~ 662 (947)
.+|+..++||+|+||.||+|++. +|+.||||++.... ..+.+|++++++++|||||++++++... + .
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~------~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~ 127 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 127 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT------TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc------hhHHHHHHHHHHcCCCCccceeeEEeccCCCCccee
Confidence 46888999999999999999885 68999999986542 1234699999999999999999998542 2 3
Q ss_pred eEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCC-CcEEEeecC
Q 002255 663 RLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD-MRAKVADFG 741 (947)
Q Consensus 663 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~-~~~kl~DfG 741 (947)
.++||||+++ ++.+.+..... ....+++..+..++.||++||+|||+ .+|+||||||+|||++.+ +.+||+|||
T Consensus 128 ~~lv~e~~~~-~l~~~~~~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NILl~~~~~~~kl~DFG 202 (420)
T 1j1b_A 128 LNLVLDYVPE-TVYRVARHYSR-AKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFG 202 (420)
T ss_dssp EEEEEECCCE-EHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred EEeehhcccc-cHHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChhhEEEeCCCCeEEeccch
Confidence 5799999965 67666643222 22458999999999999999999996 899999999999999965 678999999
Q ss_pred cceecCCCCCcceeecccccccccCccccccC-CcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcCh
Q 002255 742 LVRLAPDNGKHSIETRLAGTFGYLAPEYAVTG-RVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINK 820 (947)
Q Consensus 742 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~ 820 (947)
+++....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||.+....+ .+...+.......
T Consensus 203 ~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~--~l~~i~~~lg~p~ 277 (420)
T 1j1b_A 203 SAKQLVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD--QLVEIIKVLGTPT 277 (420)
T ss_dssp TCEECCTTCC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHHHCSCC
T ss_pred hhhhcccCCC---ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCCC
Confidence 9987654322 2345789999999998764 78999999999999999999999998754332 2222222221111
Q ss_pred -hhHHHHhhccCC---CC---hhcH------HHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 821 -DTFRKAIDRTID---LD---EETL------ASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 821 -~~~~~~~~~~~~---~~---~~~~------~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
+.+.+. .+.+. +. ...+ ....++.+|+.+||+.||++||++.|+++
T Consensus 278 ~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 278 REQIREM-NPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HHHHHHH-CSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHhh-ChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 111111 11110 00 0011 12356889999999999999999999986
No 233
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=4e-37 Score=347.86 Aligned_cols=263 Identities=21% Similarity=0.326 Sum_probs=195.1
Q ss_pred hcCCCcCceecccCceEEEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCe------
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNE------ 662 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~------ 662 (947)
..+|++.++||+|+||.||+|+...+..||+|++..... ...+|+++++.++||||+++++++...+.
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~------~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~ 112 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR------FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVF 112 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT------SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc------hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceE
Confidence 357899999999999999999998777899998865421 12369999999999999999999965432
Q ss_pred eEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEc-CCCcEEEeecC
Q 002255 663 RLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLG-DDMRAKVADFG 741 (947)
Q Consensus 663 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~-~~~~~kl~DfG 741 (947)
.++||||++++ +.+.+..... ....+++..+..++.||+.||+|||+ .+|+||||||+|||++ .++.+||+|||
T Consensus 113 ~~lv~e~~~~~-l~~~~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~kL~DFG 187 (394)
T 4e7w_A 113 LNLVLEYVPET-VYRASRHYAK-LKQTMPMLLIKLYMYQLLRSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFG 187 (394)
T ss_dssp EEEEEECCSEE-HHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred EEEEeeccCcc-HHHHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEcCCCCcEEEeeCC
Confidence 78999999765 4443332211 12458899999999999999999997 8999999999999999 79999999999
Q ss_pred cceecCCCCCcceeecccccccccCccccccC-CcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcCh
Q 002255 742 LVRLAPDNGKHSIETRLAGTFGYLAPEYAVTG-RVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINK 820 (947)
Q Consensus 742 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~ 820 (947)
+++....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||.+....+. +...+.......
T Consensus 188 ~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~--l~~i~~~~g~p~ 262 (394)
T 4e7w_A 188 SAKILIAGEP---NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQ--LVEIIKVLGTPS 262 (394)
T ss_dssp TCEECCTTCC---CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHCCCC
T ss_pred CcccccCCCC---CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHhCCCC
Confidence 9987654322 2345789999999998764 589999999999999999999999987653322 222222211111
Q ss_pred hhHHHHhhccCC---C---Chhc------HHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 821 DTFRKAIDRTID---L---DEET------LASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 821 ~~~~~~~~~~~~---~---~~~~------~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
........+... + .... .....++.+|+.+||+.||++||++.|+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 263 REQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp HHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 111111111100 0 0000 112356889999999999999999999976
No 234
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=6.3e-37 Score=336.98 Aligned_cols=265 Identities=20% Similarity=0.342 Sum_probs=195.0
Q ss_pred hcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEE---------
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCL--------- 658 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--------- 658 (947)
.++|++.+.||+|+||.||+|... +|+.||||++... .....+++.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 87 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT--DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDD 87 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC--SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC-
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC--ChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccc
Confidence 478999999999999999999886 4899999998754 4566788999999999999999999999874
Q ss_pred -----eCCeeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEc-CC
Q 002255 659 -----DGNERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLG-DD 732 (947)
Q Consensus 659 -----~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~-~~ 732 (947)
+....++||||++ |+|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++ ++
T Consensus 88 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~ 157 (320)
T 2i6l_A 88 VGSLTELNSVYIVQEYME-TDLANVLEQ------GPLLEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANLFINTED 157 (320)
T ss_dssp ---CCSCSEEEEEEECCS-EEHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTT
T ss_pred cccccccCceeEEeeccC-CCHHHHhhc------CCccHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCC
Confidence 3467899999997 699998843 347889999999999999999997 8999999999999997 56
Q ss_pred CcEEEeecCcceecCCCCC-cceeecccccccccCcccccc-CCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHH
Q 002255 733 MRAKVADFGLVRLAPDNGK-HSIETRLAGTFGYLAPEYAVT-GRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLV 810 (947)
Q Consensus 733 ~~~kl~DfGla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~ 810 (947)
+.+||+|||+++....... ........||+.|+|||.+.+ ..++.++|||||||++|||++|+.||......+...
T Consensus 158 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~-- 235 (320)
T 2i6l_A 158 LVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQ-- 235 (320)
T ss_dssp TEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--
T ss_pred CeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHH--
Confidence 7999999999986643211 112234567999999998865 678999999999999999999999998765322211
Q ss_pred HHHHHhhcCh-hhHHHHh-------hccCCCC-----hhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 811 TWFRRMHINK-DTFRKAI-------DRTIDLD-----EETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 811 ~~~~~~~~~~-~~~~~~~-------~~~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
.......... ....+.. ....... .........+.+++.+||+.||++||++.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 236 LILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp HHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 1111111100 0111110 0000000 001122456889999999999999999999977
No 235
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=8.2e-37 Score=341.10 Aligned_cols=269 Identities=24% Similarity=0.331 Sum_probs=202.5
Q ss_pred HhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeC-----C
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDG-----N 661 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~ 661 (947)
+.++|++.+.||+|+||.||+|... +|+.||||++... .......++.+|++++++++||||+++++++..+ .
T Consensus 9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 87 (353)
T 2b9h_A 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF-DKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFN 87 (353)
T ss_dssp SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCC
T ss_pred cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccc-ccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccc
Confidence 4578999999999999999999876 6899999999643 2445567788999999999999999999998754 6
Q ss_pred eeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecC
Q 002255 662 ERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 741 (947)
Q Consensus 662 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG 741 (947)
..++||||+. ++|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 88 ~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg 157 (353)
T 2b9h_A 88 EVYIIQELMQ-TDLHRVIST------QMLSDDHIQYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFG 157 (353)
T ss_dssp CEEEEECCCS-EEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCT
T ss_pred eEEEEEeccC-ccHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEcCCCcEEEEecc
Confidence 7899999996 699988854 248899999999999999999997 899999999999999999999999999
Q ss_pred cceecCCCCCcc--------eeecccccccccCcccccc-CCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHH
Q 002255 742 LVRLAPDNGKHS--------IETRLAGTFGYLAPEYAVT-GRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTW 812 (947)
Q Consensus 742 la~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~ 812 (947)
+++......... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+....+..
T Consensus 158 ~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~ 237 (353)
T 2b9h_A 158 LARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFG 237 (353)
T ss_dssp TCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred cccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHH
Confidence 998765422111 1223578999999998754 6789999999999999999999999987653322111110
Q ss_pred HHHhhc--------ChhhHHHHhhccCCCChh-----cHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 813 FRRMHI--------NKDTFRKAIDRTIDLDEE-----TLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 813 ~~~~~~--------~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
...... ......+.+......... .......+.+++.+||+.||++||++.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 238 IIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp HHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000000 001112222111110000 0122356789999999999999999999977
No 236
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=3.3e-36 Score=348.58 Aligned_cols=250 Identities=19% Similarity=0.241 Sum_probs=201.3
Q ss_pred CCCCCCce--eEeCCC---------CcEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCC--CCCCCCCCcEE
Q 002255 51 PDPCKWKH--IQCSPS---------NRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP--SLSGLSSLQEV 117 (947)
Q Consensus 51 ~d~C~w~g--v~C~~~---------~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p--~~~~l~~L~~L 117 (947)
.+.|.|.+ |.|+.. .+++.|+|++|++++..|..|.++++|++|+|++|.+.+.++ .|.++++|++|
T Consensus 5 ~~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L 84 (455)
T 3v47_A 5 TSECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIIL 84 (455)
T ss_dssp --CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEE
T ss_pred cceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEE
Confidence 34566655 888642 479999999999999889999999999999999999987664 69999999999
Q ss_pred ecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCCccc--ccCCCCCCeEeccCceeeeccCcc-cCCCCCCCccEEEc
Q 002255 118 LFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPES--LKDATGLQRFSANGANITGTIPDF-LGGDTIPGLMHLHL 194 (947)
Q Consensus 118 ~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~--~~~l~~L~~L~l~~n~l~~~~p~~-~~~~~l~~L~~L~L 194 (947)
+|++|+++++++..|.++++|++|+|++|++.+ .++.. +..+++|++|+|++|++++..|.. +. .+++|++|+|
T Consensus 85 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~--~l~~L~~L~L 161 (455)
T 3v47_A 85 KLDYNQFLQLETGAFNGLANLEVLTLTQCNLDG-AVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFL--NMRRFHVLDL 161 (455)
T ss_dssp ECTTCTTCEECTTTTTTCTTCCEEECTTSCCBT-HHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGG--GCTTCCEEEC
T ss_pred eCCCCccCccChhhccCcccCCEEeCCCCCCCc-cccCcccccCcccCCEEECCCCccCccCcccccC--CCCcccEEeC
Confidence 999999999999999999999999999999975 34444 999999999999999999888876 55 6899999999
Q ss_pred cCCcccCcCCccccC---CCCceeeeccCCCCCCCCCchh-----hhcCCCCCcEEEccCCcCcCCCCC-----------
Q 002255 195 AFNFLQGPIPLSFGK---SSIQTLWLNGQKGDSKLNGSVA-----VIQNMTSLTQLWLHGNSFTGPLPD----------- 255 (947)
Q Consensus 195 s~N~l~~~~p~~~~~---~~L~~L~l~~n~~~~~~~~~~~-----~~~~l~~L~~L~L~~N~l~~~~~~----------- 255 (947)
++|++++..|..+.. .+|+.|++++|.+......... .+..+++|+.|+|++|++++..|.
T Consensus 162 ~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L 241 (455)
T 3v47_A 162 TFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKI 241 (455)
T ss_dssp TTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCE
T ss_pred CCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccce
Confidence 999999988887755 5677888888877665433221 123456777777777777543221
Q ss_pred ---------------------------CC--CCCCCCEEEccCCccccCCCccccCCCCCCeEeccCCcccccCCCC
Q 002255 256 ---------------------------LS--GLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQTPKF 303 (947)
Q Consensus 256 ---------------------------~~--~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~ 303 (947)
+. ..++|++|++++|++++.+|..+.++++|+.|+|++|++++..|..
T Consensus 242 ~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~ 318 (455)
T 3v47_A 242 QSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNA 318 (455)
T ss_dssp EEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTT
T ss_pred eeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhH
Confidence 11 1257888888888888888888888888888888888888776654
No 237
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=6e-37 Score=341.96 Aligned_cols=261 Identities=23% Similarity=0.363 Sum_probs=200.5
Q ss_pred hcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCe-----
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNE----- 662 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 662 (947)
.++|...+.||+|+||.||+|..+ +|+.||||++..........+.+.+|+.++++++||||+++++++.....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 467999999999999999999875 68999999998765556667889999999999999999999999987654
Q ss_pred -eEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecC
Q 002255 663 -RLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 741 (947)
Q Consensus 663 -~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG 741 (947)
.++||||+. ++|.+++.. .+++..+..++.||+.||+|||+ ++|+||||||+||+++.++.+||+|||
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg 171 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL-------KFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFG 171 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS-------CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTCCEEECSTT
T ss_pred eEEEEecccc-CCHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEeECCCCcEEEeecc
Confidence 499999996 688877632 38899999999999999999997 899999999999999999999999999
Q ss_pred cceecCCCCCcceeecccccccccCcccccc-CCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcCh
Q 002255 742 LVRLAPDNGKHSIETRLAGTFGYLAPEYAVT-GRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINK 820 (947)
Q Consensus 742 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~ 820 (947)
+++..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....+....+ ........
T Consensus 172 ~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i--~~~~~~~~ 244 (353)
T 3coi_A 172 LARHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQI--LKVTGVPG 244 (353)
T ss_dssp CTTC-------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHH--HHHHCBCC
T ss_pred cccCCCCC-----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH--HHHhCCCC
Confidence 98765332 234578999999999876 67899999999999999999999999875533221111 11111100
Q ss_pred ---------hhHHHHhhcc-----CCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 821 ---------DTFRKAIDRT-----IDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 821 ---------~~~~~~~~~~-----~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
......+... .............+.+++.+||+.||++||++.++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 245 TEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp HHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0111111110 0011111223456889999999999999999999976
No 238
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1.3e-36 Score=342.86 Aligned_cols=204 Identities=24% Similarity=0.310 Sum_probs=174.6
Q ss_pred HhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCC-CC-----CcceEEEEEEeC
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVR-HR-----HLVGLLGYCLDG 660 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~~~~~~~ 660 (947)
+.++|++.+.||+|+||.||+|... +++.||||+++.. .....++..|+++++.++ |+ +|+++++++..+
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 128 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK---KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR 128 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc---HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC
Confidence 4578999999999999999999876 6889999999743 344567888999999885 55 499999999999
Q ss_pred CeeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEc--CCCcEEEe
Q 002255 661 NERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLG--DDMRAKVA 738 (947)
Q Consensus 661 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~--~~~~~kl~ 738 (947)
+..++||||+. |+|.+++..... ..+++..+..++.|++.||+|||+. +.+||||||||+|||++ .++.+||+
T Consensus 129 ~~~~lv~e~~~-~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~ 203 (382)
T 2vx3_A 129 NHLCLVFEMLS-YNLYDLLRNTNF---RGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIV 203 (382)
T ss_dssp TEEEEEEECCC-CBHHHHHHHTTT---SCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEEC
T ss_pred CceEEEEecCC-CCHHHHHhhcCc---CCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEE
Confidence 99999999995 599999866432 3488999999999999999999952 37899999999999995 47889999
Q ss_pred ecCcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCcc
Q 002255 739 DFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSE 804 (947)
Q Consensus 739 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~ 804 (947)
|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 204 DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~ 264 (382)
T 2vx3_A 204 DFGSSCQLGQR-----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEV 264 (382)
T ss_dssp CCTTCEETTCC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred eccCceecccc-----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 99999877442 22457999999999999999999999999999999999999999876543
No 239
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=6.8e-37 Score=342.72 Aligned_cols=274 Identities=23% Similarity=0.295 Sum_probs=192.3
Q ss_pred HHHHHHhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCC
Q 002255 583 QVLRNVTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGN 661 (947)
Q Consensus 583 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 661 (947)
.......++|++.+.||+|+||.||+|+.. +|+.||||++.... .....+.+|++.++.++||||+++++++...+
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~ 92 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP---RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLG 92 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT---TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEEC
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc---cccHHHHHHHHHHHhcCCCCcccHHHhhhccc
Confidence 345667789999999999999999999875 68999999986542 22235567888889999999999999997643
Q ss_pred e-------eEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcC-CC
Q 002255 662 E-------RLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD-DM 733 (947)
Q Consensus 662 ~-------~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~-~~ 733 (947)
. .++||||+++ +|.+.+..... ....+++..+..++.|++.||.|||.. .++|+||||||+|||++. ++
T Consensus 93 ~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~-~~~ivH~Dlkp~NIll~~~~~ 169 (360)
T 3e3p_A 93 ERDRRDIYLNVVMEYVPD-TLHRCCRNYYR-RQVAPPPILIKVFLFQLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEADG 169 (360)
T ss_dssp SSCTTCEEEEEEEECCSC-BHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHTST-TTCCBCSCCCGGGEEEETTTT
T ss_pred cccccceeEEEEeecccc-cHHHHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHhCC-CCCeecCcCCHHHEEEeCCCC
Confidence 3 7899999976 55444433211 224578899999999999999999921 289999999999999997 89
Q ss_pred cEEEeecCcceecCCCCCcceeecccccccccCccccccCC-cCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHH
Q 002255 734 RAKVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGR-VTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTW 812 (947)
Q Consensus 734 ~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~ 812 (947)
.+||+|||+++....... .....||+.|+|||++.+.. ++.++|||||||++|||++|+.||......+.. ...
T Consensus 170 ~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~--~~~ 244 (360)
T 3e3p_A 170 TLKLCDFGSAKKLSPSEP---NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQL--HEI 244 (360)
T ss_dssp EEEECCCTTCBCCCTTSC---CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH--HHH
T ss_pred cEEEeeCCCceecCCCCC---cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHH--HHH
Confidence 999999999987654322 23457899999999986544 899999999999999999999999875533222 222
Q ss_pred HHHhhcChhhHHHHhhccC-CC--------------ChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 813 FRRMHINKDTFRKAIDRTI-DL--------------DEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~~-~~--------------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
..............+.+.. .. ..........+.+|+.+||+.||++|||+.|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 245 VRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp HHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 2222111111111111110 00 0001113457889999999999999999999976
No 240
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.2e-36 Score=331.98 Aligned_cols=252 Identities=25% Similarity=0.417 Sum_probs=192.4
Q ss_pred HhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEe-------
Q 002255 588 VTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLD------- 659 (947)
Q Consensus 588 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------- 659 (947)
..++|++.+.||+|+||.||+|+.. +|+.||||++... ....+.+.+|+.++++++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT---EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKP 80 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE---HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc---HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhh
Confidence 4578999999999999999999875 7899999998643 4556789999999999999999999999865
Q ss_pred ------CCeeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCC
Q 002255 660 ------GNERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDM 733 (947)
Q Consensus 660 ------~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~ 733 (947)
....++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+ .+|+||||||+||+++.++
T Consensus 81 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dlkp~Nil~~~~~ 153 (303)
T 1zy4_A 81 MTAVKKKSTLFIQMEYCENGTLYDLIHSEN----LNQQRDEYWRLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESR 153 (303)
T ss_dssp -----CEEEEEEEEECCCSCBHHHHHHHSC----GGGCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTS
T ss_pred hcccccCCceEEEEecCCCCCHHHhhhccc----cccchHHHHHHHHHHHHHHHHHHh---CCeecccCCHHhEEEcCCC
Confidence 356799999999999999996532 347888999999999999999997 7999999999999999999
Q ss_pred cEEEeecCcceecCCCCC------------cceeecccccccccCccccccC-CcCcccccccHHHHHHHHHhCCCCCCc
Q 002255 734 RAKVADFGLVRLAPDNGK------------HSIETRLAGTFGYLAPEYAVTG-RVTTKVDVFSFGVILMELITGRKALDE 800 (947)
Q Consensus 734 ~~kl~DfGla~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~p~~~ 800 (947)
.+||+|||+++....... ........||+.|+|||++.+. .++.++|||||||++|||++ ||..
T Consensus 154 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~ 230 (303)
T 1zy4_A 154 NVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFST 230 (303)
T ss_dssp CEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSS
T ss_pred CEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCC
Confidence 999999999886543210 1122345689999999998754 68999999999999999998 4432
Q ss_pred cCccchhhHHHHHHHhhcChhhHHHHhhccCCCC-hhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 801 TQSEDSVHLVTWFRRMHINKDTFRKAIDRTIDLD-EETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 801 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
.. +.... ...+.......+ .........+.+++.+||+.||++||++.++++
T Consensus 231 ~~--~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 231 GM--ERVNI-------------LKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HH--HHHHH-------------HHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ch--hHHHH-------------HHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 11 11111 111111111111 111223345789999999999999999999987
No 241
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=7.8e-37 Score=335.98 Aligned_cols=254 Identities=23% Similarity=0.362 Sum_probs=182.5
Q ss_pred hcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEEE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLVY 667 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 667 (947)
.++|+..+.||+|+||.||+|... +|+.||||++..........+.+.++..+++.++||||+++++++.+++..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 367889999999999999999885 6899999999765433344445556666788889999999999999999999999
Q ss_pred EecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceecC
Q 002255 668 EYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAP 747 (947)
Q Consensus 668 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~ 747 (947)
||+ ++.+..+..... ..+++..+..++.|++.||+|||+ +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 104 e~~-~~~~~~l~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~--~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 176 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQ----GPIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLV 176 (318)
T ss_dssp CCC-SEEHHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHH--HHCCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred ecc-CCcHHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHh--hCCEEeCCCCHHHEEECCCCCEEEEECCCchhcc
Confidence 999 555554443221 348899999999999999999996 2389999999999999999999999999987654
Q ss_pred CCCCcceeecccccccccCccccc-----cCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhh
Q 002255 748 DNGKHSIETRLAGTFGYLAPEYAV-----TGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDT 822 (947)
Q Consensus 748 ~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 822 (947)
... ......||+.|+|||++. ...++.++|||||||++|||++|+.||....... ..
T Consensus 177 ~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---------------~~ 238 (318)
T 2dyl_A 177 DDK---AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDF---------------EV 238 (318)
T ss_dssp -------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHH---------------HH
T ss_pred CCc---cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccH---------------HH
Confidence 422 223457999999999984 4568899999999999999999999997543211 11
Q ss_pred HHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 823 FRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
+...........+........+.+++.+||+.||.+||++.++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 239 LTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp HHHHHHSCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHhccCCCCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 111222111111111122356889999999999999999999987
No 242
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=3.9e-37 Score=339.75 Aligned_cols=256 Identities=25% Similarity=0.348 Sum_probs=180.1
Q ss_pred cCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHH-HHHcCCCCCcceEEEEEEeCCeeEEEE
Q 002255 590 NNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIA-VLTKVRHRHLVGLLGYCLDGNERLLVY 667 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lV~ 667 (947)
++|+..+.||+|+||.||+|..+ +|+.||||++.... ......++..|+. +++.++||||+++++++.+++..++||
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTV-DEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCC-CHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeeccc-CchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 67889999999999999999875 68999999997653 3344455666666 777789999999999999999999999
Q ss_pred EecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCC-CeeecCCCCCcEEEcCCCcEEEeecCcceec
Q 002255 668 EYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQ-SFIHRDLKPSNILLGDDMRAKVADFGLVRLA 746 (947)
Q Consensus 668 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~-~ivHrDlkp~Nill~~~~~~kl~DfGla~~~ 746 (947)
||++ |+|.+++..........+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||+++..
T Consensus 101 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 176 (327)
T 3aln_A 101 ELMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE---NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQL 176 (327)
T ss_dssp CCCS-EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHH---HHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred eecC-CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhc---cCCEeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence 9997 488777754322223568999999999999999999997 5 9999999999999999999999999999866
Q ss_pred CCCCCcceeecccccccccCcccc----ccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhh
Q 002255 747 PDNGKHSIETRLAGTFGYLAPEYA----VTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDT 822 (947)
Q Consensus 747 ~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 822 (947)
.... ......||+.|+|||++ .+..++.++|||||||++|||++|+.||........ .
T Consensus 177 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---------------~ 238 (327)
T 3aln_A 177 VDSI---AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD---------------Q 238 (327)
T ss_dssp --------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC---------------------
T ss_pred cccc---ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH---------------H
Confidence 4432 12334799999999998 456789999999999999999999999975432100 0
Q ss_pred HHHHhhccC-CC-ChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 002255 823 FRKAIDRTI-DL-DEETLASISTVADLAGHCCAREPYQRPDMGHVVNV 868 (947)
Q Consensus 823 ~~~~~~~~~-~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 868 (947)
+...+.... .. ..........+.+++.+||+.||++||++.|+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 239 LTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp -CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 000111100 00 00011233568899999999999999999999773
No 243
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=2.8e-36 Score=337.03 Aligned_cols=263 Identities=21% Similarity=0.311 Sum_probs=201.5
Q ss_pred hcCCCcCceecccCceEEEEEEEc-CC-cEEEEEEecccccChHHHHHHHHHHHHHHcCCCCC------cceEEEEEEeC
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELH-DG-TKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRH------LVGLLGYCLDG 660 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g-~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~ 660 (947)
.++|++.+.||+|+||.||+|... ++ +.||+|+++.. ....+.+.+|++++++++|++ ++.+++++...
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 94 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV---GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFH 94 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEET
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc---ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeC
Confidence 478999999999999999999875 34 68999998743 445577889999999997765 89999999999
Q ss_pred CeeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEE-----------
Q 002255 661 NERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILL----------- 729 (947)
Q Consensus 661 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill----------- 729 (947)
+..++||||+ ++++.+++.... ...+++.++..++.||+.||+|||+ .+|+||||||+|||+
T Consensus 95 ~~~~lv~e~~-~~~l~~~l~~~~---~~~~~~~~~~~i~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~~ 167 (355)
T 2eu9_A 95 GHMCIAFELL-GKNTFEFLKENN---FQPYPLPHVRHMAYQLCHALRFLHE---NQLTHTDLKPENILFVNSEFETLYNE 167 (355)
T ss_dssp TEEEEEEECC-CCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEESCCCEEEEECC
T ss_pred CeEEEEEecc-CCChHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEecccccccccc
Confidence 9999999999 667777775432 2358999999999999999999996 899999999999999
Q ss_pred --------cCCCcEEEeecCcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCcc
Q 002255 730 --------GDDMRAKVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDET 801 (947)
Q Consensus 730 --------~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~ 801 (947)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 168 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 242 (355)
T 2eu9_A 168 HKSCEEKSVKNTSIRVADFGSATFDHEH-----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTH 242 (355)
T ss_dssp C-CCCEEEESCCCEEECCCTTCEETTSC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccccccCCCcEEEeecCcccccccc-----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCC
Confidence 56889999999999875442 23457999999999999999999999999999999999999999865
Q ss_pred CccchhhHHHHHHHhhcChhhHHH----------------------HhhccC----CCChhcHHHHHHHHHHHHHhcccC
Q 002255 802 QSEDSVHLVTWFRRMHINKDTFRK----------------------AIDRTI----DLDEETLASISTVADLAGHCCARE 855 (947)
Q Consensus 802 ~~~~~~~l~~~~~~~~~~~~~~~~----------------------~~~~~~----~~~~~~~~~~~~l~~li~~cl~~d 855 (947)
...+........... ........ .+.... ............+.+|+.+||+.|
T Consensus 243 ~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d 321 (355)
T 2eu9_A 243 ENREHLVMMEKILGP-IPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFD 321 (355)
T ss_dssp SHHHHHHHHHHHHCC-CCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSS
T ss_pred CHHHHHHHHHHHcCC-CcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCC
Confidence 543322221111100 00000000 000000 000111223456889999999999
Q ss_pred CCCCCCHHHHHH
Q 002255 856 PYQRPDMGHVVN 867 (947)
Q Consensus 856 P~~RPs~~evl~ 867 (947)
|++|||+.|+++
T Consensus 322 P~~Rpt~~e~l~ 333 (355)
T 2eu9_A 322 PAQRITLAEALL 333 (355)
T ss_dssp TTTSCCHHHHTT
T ss_pred hhhCcCHHHHhc
Confidence 999999999865
No 244
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.3e-36 Score=336.21 Aligned_cols=252 Identities=23% Similarity=0.295 Sum_probs=173.4
Q ss_pred HhcCCCcC-ceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEe----CC
Q 002255 588 VTNNFSEE-NVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLD----GN 661 (947)
Q Consensus 588 ~~~~~~~~-~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~ 661 (947)
+.++|.+. ++||+|+||.||+|..+ +|+.||||++... .. ...+....++.++||||+++++++.. +.
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~---~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 99 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS---PK---ARQEVDHHWQASGGPHIVCILDVYENMHHGKR 99 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS---HH---HHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc---HH---HHHHHHHHHHhcCCCChHHHHHHHhhccCCCc
Confidence 45788885 46999999999999876 6899999998653 22 12223334667799999999999876 44
Q ss_pred eeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcC---CCcEEEe
Q 002255 662 ERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD---DMRAKVA 738 (947)
Q Consensus 662 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~---~~~~kl~ 738 (947)
..++||||+++|+|.+++..+.. ..+++.+++.++.||+.||+|||+ .+|+||||||+||+++. ++.+||+
T Consensus 100 ~~~lv~e~~~gg~L~~~l~~~~~---~~l~~~~~~~i~~ql~~~l~~LH~---~~ivH~dlkp~NIll~~~~~~~~~kl~ 173 (336)
T 3fhr_A 100 CLLIIMECMEGGELFSRIQERGD---QAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLT 173 (336)
T ss_dssp EEEEEEECCTTEEHHHHHHTC-C---CCCBHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEEC
T ss_pred eEEEEEeccCCCCHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEEecCCCceEEEe
Confidence 58999999999999999975432 458999999999999999999997 79999999999999986 4569999
Q ss_pred ecCcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhc
Q 002255 739 DFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHI 818 (947)
Q Consensus 739 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~ 818 (947)
|||+++...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..........
T Consensus 174 Dfg~~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~---------- 239 (336)
T 3fhr_A 174 DFGFAKETTQNA----LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP---------- 239 (336)
T ss_dssp CCTTCEEC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC--------------------
T ss_pred ccccceeccccc----cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh----------
Confidence 999998664422 233578999999999988889999999999999999999999997654322100
Q ss_pred ChhhHHHHhhccCCCC-hhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 819 NKDTFRKAIDRTIDLD-EETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 819 ~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
.....+........ .........+.+++.+||+.||++||++.|+++
T Consensus 240 --~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 240 --GMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp -------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred --hHHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00001111111111 111123456889999999999999999999987
No 245
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=7.7e-36 Score=370.82 Aligned_cols=396 Identities=19% Similarity=0.221 Sum_probs=248.4
Q ss_pred CCCceeEeCCCCcEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcC-C-CCCCCCCCcEEecCCCcCCCCCccc
Q 002255 54 CKWKHIQCSPSNRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQI-P-SLSGLSSLQEVLFDDNNFTSVPSDF 131 (947)
Q Consensus 54 C~w~gv~C~~~~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~-p-~~~~l~~L~~L~L~~n~l~~~~~~~ 131 (947)
|.|..|.+ -..+++.|+|++|.+++..|..|.++++|++|+|++|.+.+.+ | .|.++++|++|+|++|+++++.|..
T Consensus 14 ~~L~~vP~-lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~ 92 (844)
T 3j0a_A 14 CNLTQVPQ-VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDA 92 (844)
T ss_dssp CCSSCCCS-SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTS
T ss_pred CCCCCCCC-CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhH
Confidence 56777777 5678999999999999988999999999999999999776666 4 6999999999999999999999999
Q ss_pred ccCCCCCcEEeccCCCCCCCCCccc--ccCCCCCCeEeccCceeeeccC-cccCCCCCCCccEEEccCCcccCcCCcccc
Q 002255 132 FKGLTSLQTISLDYNSFDSWVIPES--LKDATGLQRFSANGANITGTIP-DFLGGDTIPGLMHLHLAFNFLQGPIPLSFG 208 (947)
Q Consensus 132 ~~~l~~L~~L~Ls~N~l~~~~~p~~--~~~l~~L~~L~l~~n~l~~~~p-~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 208 (947)
|.++++|++|+|++|.+.+ .+|.. +.++++|++|+|++|.+++..+ ..|+ .+++|++|+|++|.+++..+..+.
T Consensus 93 ~~~l~~L~~L~Ls~n~l~~-~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~--~L~~L~~L~Ls~N~i~~~~~~~l~ 169 (844)
T 3j0a_A 93 FQGLFHLFELRLYFCGLSD-AVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFG--KLNSLKSIDFSSNQIFLVCEHELE 169 (844)
T ss_dssp SCSCSSCCCEECTTCCCSS-CCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGG--TCSSCCEEEEESSCCCCCCSGGGH
T ss_pred ccCCcccCEeeCcCCCCCc-ccccCccccccCCCCEEECCCCcccccccchhHh--hCCCCCEEECCCCcCCeeCHHHcc
Confidence 9999999999999999976 44544 8899999999999999987765 4566 688999999999998877665543
Q ss_pred C---CC------------------------------CceeeeccCCCCCCCCCchh------------------------
Q 002255 209 K---SS------------------------------IQTLWLNGQKGDSKLNGSVA------------------------ 231 (947)
Q Consensus 209 ~---~~------------------------------L~~L~l~~n~~~~~~~~~~~------------------------ 231 (947)
. .+ |+.|++++|.+.........
T Consensus 170 ~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~ 249 (844)
T 3j0a_A 170 PLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGF 249 (844)
T ss_dssp HHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSC
T ss_pred cccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccc
Confidence 2 22 56666666643322111100
Q ss_pred ---------hhcC--CCCCcEEEccCCcCcCCCCC-CCCCCCCCEEEccCCccccCCCccccCCCCCCeEeccCCccccc
Q 002255 232 ---------VIQN--MTSLTQLWLHGNSFTGPLPD-LSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQ 299 (947)
Q Consensus 232 ---------~~~~--l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ 299 (947)
.+.+ .++|+.|+|++|.+++..+. +..+++|+.|+|++|++++..|..|..+++|++|+|++|++++.
T Consensus 250 ~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 329 (844)
T 3j0a_A 250 HNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGEL 329 (844)
T ss_dssp SSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCC
T ss_pred cccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCcc
Confidence 0111 13455555555555544432 44455555555555555544454555555555555555555444
Q ss_pred CCCCCCCcc-cc----------------cccCCCCcccCcCCCcCCC------------ccceeeeccc-----------
Q 002255 300 TPKFNSPVR-FD----------------MAKGSNSFCLDDAGVACDG------------RVNVLLSIVK----------- 339 (947)
Q Consensus 300 ~p~~~~~~~-~~----------------~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~----------- 339 (947)
.|..+..+. +. +....++..++...+.+.. ..+.+...+.
T Consensus 330 ~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls 409 (844)
T 3j0a_A 330 YSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLS 409 (844)
T ss_dssp CSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECC
T ss_pred CHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceeecc
Confidence 443322111 00 0001111222222221111 0000000000
Q ss_pred -----ccC------ChhhhhccCC-------------------------CCCCCCCCCC-C---cccCCCCceeEEEecC
Q 002255 340 -----SVG------YPAVLAESWK-------------------------GNNPCNSDWK-G---VSCDAGGNITVVNLKN 379 (947)
Q Consensus 340 -----~l~------~~~~l~~~~~-------------------------~~~~~~~~~~-~---~~~~~~~~L~~L~Ls~ 379 (947)
.+. ....+..... ..+.....+. + ..+..+++|+.|+|++
T Consensus 410 ~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~ 489 (844)
T 3j0a_A 410 ENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNH 489 (844)
T ss_dssp SCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCH
T ss_pred cCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCC
Confidence 000 0000000000 0000000000 0 0123356788888888
Q ss_pred CCceeeccccccCCccCCeEeccCCcccccCCCcCCCCCCCCccccccccccccCCCCccce-eeecCCCCCCCCCC
Q 002255 380 LGLSGTISSNFSRLTSLRQLMLSGNELTGTIPKELTTLPSLEMLDVSNNHLFGKVPNFRQNV-IVKTDGNPDIGKDS 455 (947)
Q Consensus 380 n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~-~~~~~~n~~~~~~~ 455 (947)
|++++..|..|.++++|+.|+|++|+|++..|..+. ++|+.|||++|+|+|.+|..+... .+.+.+||+.|.+.
T Consensus 490 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~C~c~ 564 (844)
T 3j0a_A 490 NYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFICECE 564 (844)
T ss_dssp HHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCSSCCEEEEEEECCCCSSS
T ss_pred CcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhCCcCEEEecCCCcccccc
Confidence 888888888888888899999999988865555555 788899999999999888765544 56789999999765
No 246
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1e-36 Score=348.98 Aligned_cols=251 Identities=26% Similarity=0.352 Sum_probs=187.5
Q ss_pred cCCCcCceecccCceEEEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHHHHcC-CCCCcceEEEEEEeCCeeEEEEE
Q 002255 590 NNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKV-RHRHLVGLLGYCLDGNERLLVYE 668 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e 668 (947)
+.|...++||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +|||||++++++.+++..++|||
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~-----~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E 89 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID-----FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALE 89 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG-----GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH-----HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEe
Confidence 455667899999999998877778999999998643 235678899999986 89999999999999999999999
Q ss_pred ecCCCchhhhhhcccccCC--CcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCC-------------C
Q 002255 669 YMPQGTLSRHLFNRKEEGL--KPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDD-------------M 733 (947)
Q Consensus 669 ~~~~gsL~~~l~~~~~~~~--~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~-------------~ 733 (947)
|+. |+|.+++........ ....+..++.++.||+.||+|||+ .+|+||||||+|||++.+ +
T Consensus 90 ~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~ 165 (434)
T 2rio_A 90 LCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENL 165 (434)
T ss_dssp CCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEECCHHHHSCCTTCCCSC
T ss_pred cCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCcccccccccCCCce
Confidence 995 799999976432211 111333457899999999999997 899999999999999754 4
Q ss_pred cEEEeecCcceecCCCCCcc--eeecccccccccCcccccc-------CCcCcccccccHHHHHHHHHh-CCCCCCccCc
Q 002255 734 RAKVADFGLVRLAPDNGKHS--IETRLAGTFGYLAPEYAVT-------GRVTTKVDVFSFGVILMELIT-GRKALDETQS 803 (947)
Q Consensus 734 ~~kl~DfGla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwSlGvil~ellt-g~~p~~~~~~ 803 (947)
.+||+|||+++......... ......||+.|+|||++.+ ..++.++|||||||++|||++ |+.||.....
T Consensus 166 ~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~ 245 (434)
T 2rio_A 166 RILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS 245 (434)
T ss_dssp EEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTT
T ss_pred EEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchh
Confidence 89999999999775532211 1234579999999999865 578999999999999999999 9999975432
Q ss_pred cchhhHHHHHHHhhcChhhHHHHhhccCCC----ChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 804 EDSVHLVTWFRRMHINKDTFRKAIDRTIDL----DEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 804 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
.. ..++...... .........++.+++.+||+.||++||++.||++
T Consensus 246 ~~------------------~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 246 RE------------------SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp HH------------------HHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hH------------------HHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 11 0111111111 1112344567889999999999999999999986
No 247
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=1.4e-36 Score=341.95 Aligned_cols=260 Identities=21% Similarity=0.318 Sum_probs=198.9
Q ss_pred cCCCcCceecccCceEEEEEEE-cCCcEEEEEEecccccChHHHHHHHHHHHHHHcCC-----------CCCcceEEEEE
Q 002255 590 NNFSEENVLGRGGFGTVYKGEL-HDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVR-----------HRHLVGLLGYC 657 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~~~ 657 (947)
++|++.+.||+|+||.||+|.. .+++.||||++... ....+.+.+|++++++++ ||||+++++++
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~ 95 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD---KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHF 95 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC---ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHh
Confidence 6899999999999999999987 46899999998743 344567889999999886 89999999998
Q ss_pred EeCC----eeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCC-CeeecCCCCCcEEEc--
Q 002255 658 LDGN----ERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQ-SFIHRDLKPSNILLG-- 730 (947)
Q Consensus 658 ~~~~----~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~-~ivHrDlkp~Nill~-- 730 (947)
...+ ..++||||+ +++|.+++..... ..+++..+..++.||+.||+|||+ + +|+||||||+|||++
T Consensus 96 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~---~~~~~~~~~~i~~qi~~aL~~lH~---~~~ivH~Dikp~NIll~~~ 168 (373)
T 1q8y_A 96 NHKGPNGVHVVMVFEVL-GENLLALIKKYEH---RGIPLIYVKQISKQLLLGLDYMHR---RCGIIHTDIKPENVLMEIV 168 (373)
T ss_dssp EEEETTEEEEEEEECCC-CEEHHHHHHHTTT---SCCCHHHHHHHHHHHHHHHHHHHH---TTCEECSCCSGGGEEEEEE
T ss_pred hccCCCCceEEEEEecC-CCCHHHHHHHhhc---cCCcHHHHHHHHHHHHHHHHHHHh---cCCEEecCCChHHeEEecc
Confidence 8654 789999999 9999999865432 348899999999999999999997 5 999999999999994
Q ss_pred ----CCCcEEEeecCcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccc-
Q 002255 731 ----DDMRAKVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSED- 805 (947)
Q Consensus 731 ----~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~- 805 (947)
..+.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 169 ~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~ 243 (373)
T 1q8y_A 169 DSPENLIQIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSY 243 (373)
T ss_dssp ETTTTEEEEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC--------
T ss_pred CCCcCcceEEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCccccc
Confidence 4458999999999876442 223479999999999999899999999999999999999999997654221
Q ss_pred ---hhhHHHHHHHhhcChhh----------------------------HHHHhhccCCCChhcHHHHHHHHHHHHHhccc
Q 002255 806 ---SVHLVTWFRRMHINKDT----------------------------FRKAIDRTIDLDEETLASISTVADLAGHCCAR 854 (947)
Q Consensus 806 ---~~~l~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 854 (947)
...+...+......... ....+..... ........+.+|+.+||+.
T Consensus 244 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~L~~ 320 (373)
T 1q8y_A 244 TKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYK---FSKDEAKEISDFLSPMLQL 320 (373)
T ss_dssp -CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTC---CCHHHHHHHHHHHGGGGCS
T ss_pred CChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhccc---CCcchHHHHHHHHHHHhcc
Confidence 11111111111100000 0111111111 1234556788999999999
Q ss_pred CCCCCCCHHHHHH
Q 002255 855 EPYQRPDMGHVVN 867 (947)
Q Consensus 855 dP~~RPs~~evl~ 867 (947)
||++|||++|+++
T Consensus 321 dP~~Rpt~~ell~ 333 (373)
T 1q8y_A 321 DPRKRADAGGLVN 333 (373)
T ss_dssp STTTCBCHHHHHT
T ss_pred CccccCCHHHHhh
Confidence 9999999999976
No 248
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=7.2e-37 Score=336.17 Aligned_cols=247 Identities=25% Similarity=0.382 Sum_probs=200.0
Q ss_pred HHHHHhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccCh----HHHHHHHHHHHHHHcCC--CCCcceEEEE
Q 002255 584 VLRNVTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSE----KGFAEFKSEIAVLTKVR--HRHLVGLLGY 656 (947)
Q Consensus 584 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~--h~niv~l~~~ 656 (947)
......++|++.+.||+|+||.||+|... +++.||||++....... ...+.+.+|+.++++++ |+||++++++
T Consensus 37 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~ 116 (320)
T 3a99_A 37 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW 116 (320)
T ss_dssp ---CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEE
T ss_pred ccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEE
Confidence 33456688999999999999999999864 68999999997653322 12245678999999996 5999999999
Q ss_pred EEeCCeeEEEEEecCC-CchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEc-CCCc
Q 002255 657 CLDGNERLLVYEYMPQ-GTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLG-DDMR 734 (947)
Q Consensus 657 ~~~~~~~~lV~e~~~~-gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~-~~~~ 734 (947)
+..++..++|||++.+ ++|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+||+++ +++.
T Consensus 117 ~~~~~~~~lv~e~~~~~~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~ 188 (320)
T 3a99_A 117 FERPDSFVLILERPEPVQDLFDFITER-----GALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGE 188 (320)
T ss_dssp EECSSEEEEEEECCSSEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTE
T ss_pred EecCCcEEEEEEcCCCCccHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcEeCCCCHHHEEEeCCCCC
Confidence 9999999999999976 8999998653 348899999999999999999997 8999999999999999 7899
Q ss_pred EEEeecCcceecCCCCCcceeecccccccccCccccccCCc-CcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHH
Q 002255 735 AKVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRV-TTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWF 813 (947)
Q Consensus 735 ~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~ 813 (947)
+||+|||+++...... .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||.....
T Consensus 189 ~kL~Dfg~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~---------- 254 (320)
T 3a99_A 189 LKLIDFGSGALLKDTV----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE---------- 254 (320)
T ss_dssp EEECCCTTCEECCSSC----BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH----------
T ss_pred EEEeeCcccccccccc----ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh----------
Confidence 9999999998765432 234579999999999877665 6889999999999999999999964310
Q ss_pred HHhhcChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 814 RRMHINKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 814 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
.......... .....+.+++.+||+.||++||++.|+++
T Consensus 255 ------------~~~~~~~~~~---~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 255 ------------IIRGQVFFRQ---RVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp ------------HHHCCCCCSS---CCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ------------hhcccccccc---cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0111111111 12345789999999999999999999976
No 249
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=2e-36 Score=331.72 Aligned_cols=246 Identities=25% Similarity=0.399 Sum_probs=191.4
Q ss_pred HHHHhcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccCh----HHHHHHHHHHHHHHcC----CCCCcceEEE
Q 002255 585 LRNVTNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSE----KGFAEFKSEIAVLTKV----RHRHLVGLLG 655 (947)
Q Consensus 585 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l----~h~niv~l~~ 655 (947)
.+...++|++.+.||+|+||.||+|... +++.||||++....... .....+.+|+.++.++ +||||+++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 4456789999999999999999999764 68899999997653222 1234466799999999 8999999999
Q ss_pred EEEeCCeeEEEEEe-cCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEc-CCC
Q 002255 656 YCLDGNERLLVYEY-MPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLG-DDM 733 (947)
Q Consensus 656 ~~~~~~~~~lV~e~-~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~-~~~ 733 (947)
++...+..++|||| +.+++|.+++... ..+++..++.++.||+.||+|||+ .+|+||||||+||+++ .++
T Consensus 106 ~~~~~~~~~~v~e~~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~ 177 (312)
T 2iwi_A 106 WFETQEGFMLVLERPLPAQDLFDYITEK-----GPLGEGPSRCFFGQVVAAIQHCHS---RGVVHRDIKDENILIDLRRG 177 (312)
T ss_dssp EC-----CEEEEECCSSEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHH---HTEECCCCSGGGEEEETTTT
T ss_pred EEecCCeEEEEEEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChhhEEEeCCCC
Confidence 99999999999999 7899999999653 248899999999999999999997 7999999999999999 889
Q ss_pred cEEEeecCcceecCCCCCcceeecccccccccCccccccCCcC-cccccccHHHHHHHHHhCCCCCCccCccchhhHHHH
Q 002255 734 RAKVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVT-TKVDVFSFGVILMELITGRKALDETQSEDSVHLVTW 812 (947)
Q Consensus 734 ~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~ 812 (947)
.+||+|||+++...... .....||+.|+|||++.+..+. .++||||||+++|||++|+.||....
T Consensus 178 ~~kl~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~---------- 243 (312)
T 2iwi_A 178 CAKLIDFGSGALLHDEP----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ---------- 243 (312)
T ss_dssp EEEECCCSSCEECCSSC----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH----------
T ss_pred eEEEEEcchhhhcccCc----ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH----------
Confidence 99999999998765432 2345799999999998776664 58999999999999999999996421
Q ss_pred HHHhhcChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 813 FRRMHINKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
+.......... .....+.+++.+||+.||++||++.|+++
T Consensus 244 ------------~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 244 ------------EILEAELHFPA---HVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp ------------HHHHTCCCCCT---TSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred ------------HHhhhccCCcc---cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 01111111111 12345789999999999999999999976
No 250
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.9e-36 Score=342.92 Aligned_cols=248 Identities=24% Similarity=0.370 Sum_probs=185.6
Q ss_pred cCCCcCceecccCceEEEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHHHHcC-CCCCcceEEEEEEeCCeeEEEEE
Q 002255 590 NNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKV-RHRHLVGLLGYCLDGNERLLVYE 668 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e 668 (947)
.+|...++||+|+||+||.....+|+.||||++..... ..+.+|+++++++ +|||||++++++.++...++|||
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~-----~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E 98 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF-----SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE 98 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE-----EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH-----HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEE
Confidence 46888899999999997766667799999999865422 2356799999999 79999999999999999999999
Q ss_pred ecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcC-----CCcEEEeecCcc
Q 002255 669 YMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD-----DMRAKVADFGLV 743 (947)
Q Consensus 669 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~-----~~~~kl~DfGla 743 (947)
|+. |+|.+++..... ...+.++..++.||+.||+|||+ .+|+||||||+|||++. ...+||+|||++
T Consensus 99 ~~~-g~L~~~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a 170 (432)
T 3p23_A 99 LCA-ATLQEYVEQKDF----AHLGLEPITLLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLC 170 (432)
T ss_dssp CCS-EEHHHHHHSSSC----CCCSSCHHHHHHHHHHHHHHHHH---TTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEE
T ss_pred CCC-CCHHHHHHhcCC----CccchhHHHHHHHHHHHHHHHHH---CcCEeCCCCHHHEEEecCCCCCceeEEEecccce
Confidence 995 699999865432 23344567899999999999997 79999999999999953 346889999999
Q ss_pred eecCCCCCc-ceeecccccccccCccccc---cCCcCcccccccHHHHHHHHHh-CCCCCCccCccchhhHHHHHHHhhc
Q 002255 744 RLAPDNGKH-SIETRLAGTFGYLAPEYAV---TGRVTTKVDVFSFGVILMELIT-GRKALDETQSEDSVHLVTWFRRMHI 818 (947)
Q Consensus 744 ~~~~~~~~~-~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvil~ellt-g~~p~~~~~~~~~~~l~~~~~~~~~ 818 (947)
+........ .......||+.|+|||++. ...++.++|||||||++|||++ |..||.......
T Consensus 171 ~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~------------- 237 (432)
T 3p23_A 171 KKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQ------------- 237 (432)
T ss_dssp ECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHH-------------
T ss_pred eeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHH-------------
Confidence 876543211 2234467999999999987 4567889999999999999999 899996543211
Q ss_pred ChhhHHHHhhc-cCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 819 NKDTFRKAIDR-TIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 819 ~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
....... ..............+.+|+.+||+.||++||++.||++
T Consensus 238 ----~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 238 ----ANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp ----HHHHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ----HHHHhccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 0111111 11111111223345779999999999999999999985
No 251
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.5e-35 Score=364.36 Aligned_cols=355 Identities=26% Similarity=0.389 Sum_probs=256.2
Q ss_pred CcEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCC-C-CCCCCCCcEEecCCCcCCCCCcccccCCC-CCcEE
Q 002255 65 NRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-S-LSGLSSLQEVLFDDNNFTSVPSDFFKGLT-SLQTI 141 (947)
Q Consensus 65 ~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p-~-~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L 141 (947)
..++.|+|++|.+++.+|..|+++++|++|+|++|.++|.+| . +.++++|++|+|++|++++..|..+..++ +|++|
T Consensus 294 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L 373 (768)
T 3rgz_A 294 DTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTL 373 (768)
T ss_dssp TTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEE
T ss_pred CcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEE
Confidence 578899999999999999999999999999999999988887 3 88888888888888888866665555544 45555
Q ss_pred e--------------------------ccCCCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEcc
Q 002255 142 S--------------------------LDYNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLA 195 (947)
Q Consensus 142 ~--------------------------Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls 195 (947)
+ |++|++.+ .+|..+.++++|++|++++|++++.+|..++ .+++|++|+|+
T Consensus 374 ~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~--~l~~L~~L~L~ 450 (768)
T 3rgz_A 374 DLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTG-KIPPTLSNCSELVSLHLSFNYLSGTIPSSLG--SLSKLRDLKLW 450 (768)
T ss_dssp ECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEE-ECCGGGGGCTTCCEEECCSSEEESCCCGGGG--GCTTCCEEECC
T ss_pred EccCCCcCCCcChhhhhcccCCccEEECCCCcccc-ccCHHHhcCCCCCEEECcCCcccCcccHHHh--cCCCCCEEECC
Confidence 4 44554443 4666777777777777777777777777776 57778888888
Q ss_pred CCcccCcCCccccC-CCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccCCcCcCCCCC-CCCCCCCCEEEccCCccc
Q 002255 196 FNFLQGPIPLSFGK-SSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPLPD-LSGLSSLQDFSVRDNQLT 273 (947)
Q Consensus 196 ~N~l~~~~p~~~~~-~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~l~~N~l~ 273 (947)
+|++++.+|..+.. .+|+.|+|++|.+..... ..+.++++|+.|+|++|++++.+|. +..+++|++|+|++|+++
T Consensus 451 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p---~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 527 (768)
T 3rgz_A 451 LNMLEGEIPQELMYVKTLETLILDFNDLTGEIP---SGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFS 527 (768)
T ss_dssp SSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCC---GGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCE
T ss_pred CCcccCcCCHHHcCCCCceEEEecCCcccCcCC---HHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCccc
Confidence 88887777777755 678888888887765543 3467788999999999999988885 788899999999999999
Q ss_pred cCCCccccCCCCCCeEeccCCcccccCCCCCCCccc----cc--------------------------------------
Q 002255 274 GIVPSSLVNLHSLAVVNLTNNLFQGQTPKFNSPVRF----DM-------------------------------------- 311 (947)
Q Consensus 274 g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~----~~-------------------------------------- 311 (947)
|.+|..+.++++|+.|+|++|+++|.+|..+..... ..
T Consensus 528 ~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 607 (768)
T 3rgz_A 528 GNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRL 607 (768)
T ss_dssp EECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGG
T ss_pred CcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhcc
Confidence 999999999999999999999999998864322110 00
Q ss_pred ---------------------ccCCCCcccCcCCCcCCCccceeeecccccCChhhhhccCCCCCCCCCCCCCcccCCCC
Q 002255 312 ---------------------AKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAGG 370 (947)
Q Consensus 312 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 370 (947)
....+...++...+.+.+..+ ..++....+.......+...... ...+..+.
T Consensus 608 ~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip------~~l~~l~~L~~L~Ls~N~l~g~i-p~~l~~L~ 680 (768)
T 3rgz_A 608 STRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIP------KEIGSMPYLFILNLGHNDISGSI-PDEVGDLR 680 (768)
T ss_dssp GGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCC------GGGGGCTTCCEEECCSSCCCSCC-CGGGGGCT
T ss_pred ccccccccccceecccCchhhhccccccEEECcCCcccccCC------HHHhccccCCEEeCcCCccCCCC-ChHHhCCC
Confidence 000111222333333332222 22222222222222222211111 11344567
Q ss_pred ceeEEEecCCCceeeccccccCCccCCeEeccCCcccccCCCcCCCCCCCCcccccccc-cccc
Q 002255 371 NITVVNLKNLGLSGTISSNFSRLTSLRQLMLSGNELTGTIPKELTTLPSLEMLDVSNNH-LFGK 433 (947)
Q Consensus 371 ~L~~L~Ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ls~N~-l~g~ 433 (947)
+|+.|+|++|+++|.||..++++++|++|||++|+|+|.||.. +.+..+..+.+.+|. |+|.
T Consensus 681 ~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~-~~~~~~~~~~~~gN~~Lcg~ 743 (768)
T 3rgz_A 681 GLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM-GQFETFPPAKFLNNPGLCGY 743 (768)
T ss_dssp TCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSS-SSGGGSCGGGGCSCTEEEST
T ss_pred CCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCc-hhhccCCHHHhcCCchhcCC
Confidence 8999999999999999999999999999999999999999965 556677777888885 7775
No 252
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.2e-34 Score=348.32 Aligned_cols=374 Identities=17% Similarity=0.154 Sum_probs=264.4
Q ss_pred CcEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEec
Q 002255 65 NRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISL 143 (947)
Q Consensus 65 ~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (947)
.+++.|+|++|.+++..+..|.++++|++|+|++|.+++.+| .|.++++|++|+|++|++++++|..|+++++|++|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 478999999999998888889999999999999999998877 6899999999999999999998888999999999999
Q ss_pred cCCCCCCCCCcccccCCCCCCeEeccCceeee-ccCcccCCCCCCCccEEEccCCcccCcCCccccC-------------
Q 002255 144 DYNSFDSWVIPESLKDATGLQRFSANGANITG-TIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGK------------- 209 (947)
Q Consensus 144 s~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~-~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~------------- 209 (947)
++|++.. ..+..++++++|++|++++|.+++ .+|..++ .+++|++|+|++|++++..|..++.
T Consensus 112 ~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~--~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l 188 (606)
T 3vq2_A 112 VETKLAS-LESFPIGQLITLKKLNVAHNFIHSCKLPAYFS--NLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDM 188 (606)
T ss_dssp TTSCCCC-SSSSCCTTCTTCCEEECCSSCCCCCCCCGGGG--TCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEEC
T ss_pred cCCcccc-ccccccCCCCCCCEEeCCCCcccceechHhHh--hcCCCCEEEccCCcceecChhhhhhhhccccccceeec
Confidence 9999876 455778999999999999999886 6788887 6889999999988888766554322
Q ss_pred ---------------CCCceeeeccCCCC---------------------------------------------------
Q 002255 210 ---------------SSIQTLWLNGQKGD--------------------------------------------------- 223 (947)
Q Consensus 210 ---------------~~L~~L~l~~n~~~--------------------------------------------------- 223 (947)
.+|+.|++++|.+.
T Consensus 189 ~~n~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l 268 (606)
T 3vq2_A 189 SLNPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRL 268 (606)
T ss_dssp TTCCCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEE
T ss_pred cCCCcceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheec
Confidence 13444444444321
Q ss_pred ----------------------------------------------------CCC----------------CCchhhhcC
Q 002255 224 ----------------------------------------------------SKL----------------NGSVAVIQN 235 (947)
Q Consensus 224 ----------------------------------------------------~~~----------------~~~~~~~~~ 235 (947)
... ......+..
T Consensus 269 ~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l~~lp~~~l~~L~~L~l~~n~~~~~~~~~~ 348 (606)
T 3vq2_A 269 TYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLTLTMNKGSISFKKVA 348 (606)
T ss_dssp CCCTTCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCCSSCCCCCCSSCCEEEEESCSSCEECCCCC
T ss_pred cccccccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccCcccccCCCCccceeeccCCcCccchhhcc
Confidence 000 000001234
Q ss_pred CCCCcEEEccCCcCcCCC--C-CCCCCCCCCEEEccCCccccCCCccccCCCCCCeEeccCCcccccCC-CCCCCccccc
Q 002255 236 MTSLTQLWLHGNSFTGPL--P-DLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQTP-KFNSPVRFDM 311 (947)
Q Consensus 236 l~~L~~L~L~~N~l~~~~--~-~~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p-~~~~~~~~~~ 311 (947)
+++|+.|+|++|.+++.. + .+..+++|++|++++|.+++ +|..+..+++|+.|++++|++++.+| ..+...
T Consensus 349 l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l---- 423 (606)
T 3vq2_A 349 LPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSL---- 423 (606)
T ss_dssp CTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTC----
T ss_pred CCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhcc----
Confidence 456666666666666542 2 35667888888888888884 66788888888888888888888766 332211
Q ss_pred ccCCCCcccCcCCCcCCCccceeeecccccCChhhhhccCCCCCCCCCCCCCcccCCCCceeEEEecCCCceeecccccc
Q 002255 312 AKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLSGTISSNFS 391 (947)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g~ip~~~~ 391 (947)
.+...++...+.+..... ..+.....+.......+..........+..+.+|+.|+|++|++++.+|..|+
T Consensus 424 ---~~L~~L~l~~n~l~~~~~------~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 494 (606)
T 3vq2_A 424 ---EKLLYLDISYTNTKIDFD------GIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFD 494 (606)
T ss_dssp ---TTCCEEECTTSCCEECCT------TTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTT
T ss_pred ---ccCCEEECcCCCCCccch------hhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhc
Confidence 122222222222221111 11111111222221111110000011234567899999999999999999999
Q ss_pred CCccCCeEeccCCcccccCCCcCCCCCCCCccccccccccccCCCCcc-----ceeeecCCCCCCCCCCC
Q 002255 392 RLTSLRQLMLSGNELTGTIPKELTTLPSLEMLDVSNNHLFGKVPNFRQ-----NVIVKTDGNPDIGKDSS 456 (947)
Q Consensus 392 ~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ls~N~l~g~iP~~~~-----~~~~~~~~n~~~~~~~~ 456 (947)
++++|+.|+|++|++++.+|..+..+++|+.|||++|+|+ .+|.... ...+.+.+|++.|..+.
T Consensus 495 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 495 TLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp TCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred ccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCcc
Confidence 9999999999999999988999999999999999999998 5665322 23467899999997653
No 253
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=2.5e-35 Score=317.76 Aligned_cols=233 Identities=12% Similarity=0.078 Sum_probs=185.7
Q ss_pred hcCCCcCceecccCceEEEEEEEc-CCcEEEEEEeccccc-ChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVV-SEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLV 666 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 666 (947)
.++|++.+.||+|+||.||+|... +|+.||||++..... .....+.+.+|+.++++++||||+++++++.+++..|+|
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 468999999999999999999876 489999999986543 345568899999999999999999999999999999999
Q ss_pred EEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceec
Q 002255 667 YEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 746 (947)
Q Consensus 667 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~ 746 (947)
|||+++++|.+++... ....++.+++.|++.||+|||+ ++|+||||||+||+++.++.+||+++|
T Consensus 110 ~e~~~g~~L~~~l~~~-------~~~~~~~~i~~ql~~aL~~lH~---~givH~Dikp~NIll~~~g~~kl~~~~----- 174 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTS-------PSPVGAIRAMQSLAAAADAAHR---AGVALSIDHPSRVRVSIDGDVVLAYPA----- 174 (286)
T ss_dssp EECCCEEEHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEETTSCEEECSCC-----
T ss_pred EEecCCCCHHHHHhcC-------CChHHHHHHHHHHHHHHHHHHH---CCCccCCCCcccEEEcCCCCEEEEecc-----
Confidence 9999999999998431 2344678899999999999997 899999999999999999999998443
Q ss_pred CCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHHH
Q 002255 747 PDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKA 826 (947)
Q Consensus 747 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 826 (947)
|++ .++.++|||||||++|||++|+.||.+....+..... . ..
T Consensus 175 -----------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~---------~----~~ 217 (286)
T 3uqc_A 175 -----------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA---------E----RD 217 (286)
T ss_dssp -----------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC---------C----BC
T ss_pred -----------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH---------H----HH
Confidence 333 3688999999999999999999999876543211000 0 00
Q ss_pred hhccCCC-ChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhh
Q 002255 827 IDRTIDL-DEETLASISTVADLAGHCCAREPYQRPDMGHVVNVLSSLAE 874 (947)
Q Consensus 827 ~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~l~~ 874 (947)
+...... ..........+.+++.+||+.||++| |+.|+++.|+.+..
T Consensus 218 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~ 265 (286)
T 3uqc_A 218 TAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATA 265 (286)
T ss_dssp TTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC
T ss_pred hccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhc
Confidence 0000000 00011223468899999999999999 99999999998764
No 254
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-34 Score=337.15 Aligned_cols=335 Identities=16% Similarity=0.171 Sum_probs=270.9
Q ss_pred CCceeEeCCC----------CcEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCc
Q 002255 55 KWKHIQCSPS----------NRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNN 123 (947)
Q Consensus 55 ~w~gv~C~~~----------~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~ 123 (947)
.|..|.|... .+++.|+|++|++++..+..|.++++|++|+|++|.+++..| .|.++++|++|+|++|+
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 4778888632 368899999999998888889999999999999999998877 78999999999999999
Q ss_pred CCCCCcccccCCCCCcEEeccCCCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCcccCcC
Q 002255 124 FTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPI 203 (947)
Q Consensus 124 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~ 203 (947)
++.+++..|.++++|++|+|++|++.. ..+..+.++++|++|++++|.+++..|..|. .+++|++|+|++|++++..
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~--~l~~L~~L~l~~n~l~~~~ 168 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVI-LLDYMFQDLYNLKSLEVGDNDLVYISHRAFS--GLNSLEQLTLEKCNLTSIP 168 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCE-ECTTTTTTCTTCCEEEECCTTCCEECTTSST--TCTTCCEEEEESCCCSSCC
T ss_pred CCccCcccccCCCCCCEEECCCCcccc-CChhHccccccCCEEECCCCccceeChhhcc--CCCCCCEEECCCCcCcccC
Confidence 999999889999999999999999976 6678889999999999999999988888887 6889999999999998665
Q ss_pred CccccC-CCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccCCcCcCCCC-CCCCCCCCCEEEccCCccccCCCcccc
Q 002255 204 PLSFGK-SSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPLP-DLSGLSSLQDFSVRDNQLTGIVPSSLV 281 (947)
Q Consensus 204 p~~~~~-~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~g~~p~~l~ 281 (947)
+..+.. .+|+.|+|++|.+...... .+.++++|+.|+|++|.+.+.++ ......+|+.|+|++|++++..+..+.
T Consensus 169 ~~~l~~l~~L~~L~l~~n~i~~~~~~---~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~ 245 (477)
T 2id5_A 169 TEALSHLHGLIVLRLRHLNINAIRDY---SFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVR 245 (477)
T ss_dssp HHHHTTCTTCCEEEEESCCCCEECTT---CSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHT
T ss_pred hhHhcccCCCcEEeCCCCcCcEeChh---hcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhc
Confidence 555654 6799999999888765443 36678899999999988777665 355566899999999999855446788
Q ss_pred CCCCCCeEeccCCcccccCCCCCCCcccccccCCCCcccCcCCCcCCCccceeeecccccCChhhhhccCCCCCCCCCCC
Q 002255 282 NLHSLAVVNLTNNLFQGQTPKFNSPVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDW 361 (947)
Q Consensus 282 ~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~ 361 (947)
++++|+.|+|++|++++..+..+
T Consensus 246 ~l~~L~~L~Ls~n~l~~~~~~~~--------------------------------------------------------- 268 (477)
T 2id5_A 246 HLVYLRFLNLSYNPISTIEGSML--------------------------------------------------------- 268 (477)
T ss_dssp TCTTCCEEECCSSCCCEECTTSC---------------------------------------------------------
T ss_pred CccccCeeECCCCcCCccChhhc---------------------------------------------------------
Confidence 89999999999999886655321
Q ss_pred CCcccCCCCceeEEEecCCCceeeccccccCCccCCeEeccCCcccccCCCcCCCCCCCCccccccccccccCCCCcc--
Q 002255 362 KGVSCDAGGNITVVNLKNLGLSGTISSNFSRLTSLRQLMLSGNELTGTIPKELTTLPSLEMLDVSNNHLFGKVPNFRQ-- 439 (947)
Q Consensus 362 ~~~~~~~~~~L~~L~Ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ls~N~l~g~iP~~~~-- 439 (947)
....+|+.|+|++|++++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+|.+..+..+.
T Consensus 269 -----~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~ 343 (477)
T 2id5_A 269 -----HELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFR 343 (477)
T ss_dssp -----TTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHHHT
T ss_pred -----cccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccchHhHHh
Confidence 2234789999999999999999999999999999999999966566788999999999999999887653211
Q ss_pred -ceeeecCCCCCCCCCCCC
Q 002255 440 -NVIVKTDGNPDIGKDSSS 457 (947)
Q Consensus 440 -~~~~~~~~n~~~~~~~~~ 457 (947)
.....+.++...|..|..
T Consensus 344 ~~~~~~~~~~~~~C~~p~~ 362 (477)
T 2id5_A 344 RRWRLNFNRQQPTCATPEF 362 (477)
T ss_dssp TTTSSCCTTCCCBEEESGG
T ss_pred hhhccccCccCceeCCchH
Confidence 111334556666655433
No 255
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.8e-35 Score=354.46 Aligned_cols=241 Identities=22% Similarity=0.350 Sum_probs=195.8
Q ss_pred hcCCCcCceecccCceEEEEEEEc--CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCe----
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELH--DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNE---- 662 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~--~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---- 662 (947)
.++|++.++||+|+||.||+|.+. +|+.||||++.... .......+.+|++++++++|||||++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 157 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG-DAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDP 157 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC-CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC-CHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCc
Confidence 478999999999999999999885 58999999986542 44556788999999999999999999999987655
Q ss_pred -eEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecC
Q 002255 663 -RLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFG 741 (947)
Q Consensus 663 -~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfG 741 (947)
.|+||||+++++|.+++.. .+++.+++.++.||+.||+|||+ ++||||||||+|||++.+ .+||+|||
T Consensus 158 ~~~lv~E~~~g~~L~~~~~~-------~l~~~~~~~~~~qi~~aL~~lH~---~giiHrDlkp~NIll~~~-~~kl~DFG 226 (681)
T 2pzi_A 158 VGYIVMEYVGGQSLKRSKGQ-------KLPVAEAIAYLLEILPALSYLHS---IGLVYNDLKPENIMLTEE-QLKLIDLG 226 (681)
T ss_dssp EEEEEEECCCCEECC----C-------CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSS-CEEECCCT
T ss_pred eeEEEEEeCCCCcHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHH---CCCeecccChHHeEEeCC-cEEEEecc
Confidence 6999999999999887632 48999999999999999999997 899999999999999986 99999999
Q ss_pred cceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhcChh
Q 002255 742 LVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKD 821 (947)
Q Consensus 742 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~ 821 (947)
+++..... ....||+.|+|||++.+. ++.++|||||||++|||++|..||........
T Consensus 227 ~a~~~~~~------~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~--------------- 284 (681)
T 2pzi_A 227 AVSRINSF------GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDGL--------------- 284 (681)
T ss_dssp TCEETTCC------SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSSC---------------
T ss_pred cchhcccC------CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccccc---------------
Confidence 99876543 335799999999988765 48999999999999999999988865321110
Q ss_pred hHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCC-HHHHHHHHHhhh
Q 002255 822 TFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPD-MGHVVNVLSSLA 873 (947)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~~L~~l~ 873 (947)
............+.+++.+||+.||++||+ +.++.+.|..+.
T Consensus 285 ----------~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 327 (681)
T 2pzi_A 285 ----------PEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL 327 (681)
T ss_dssp ----------CTTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred ----------cccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence 001111222356789999999999999995 666767666553
No 256
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=4e-34 Score=339.39 Aligned_cols=378 Identities=17% Similarity=0.165 Sum_probs=250.8
Q ss_pred CCCCceeEeCCC------------CcEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEec
Q 002255 53 PCKWKHIQCSPS------------NRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLF 119 (947)
Q Consensus 53 ~C~w~gv~C~~~------------~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L 119 (947)
.|.|.|+ |+.. .+++.|+|++|++++..|..|.++++|++|+|++|++++.+| .|.++++|++|+|
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 4899888 8632 379999999999999889999999999999999999999887 7999999999999
Q ss_pred CCCcCCCCCcccccCCCCCcEEeccCCCCCCCCCcccccCCCCCCeEeccCceeeeccC-cccCCCCCCCccEEEccCCc
Q 002255 120 DDNNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGANITGTIP-DFLGGDTIPGLMHLHLAFNF 198 (947)
Q Consensus 120 ~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p-~~~~~~~l~~L~~L~Ls~N~ 198 (947)
++|+++++++..|+.+++|++|+|++|++....+|..++++++|++|++++|.+.+.+| ..+. .+++|++|+|++|+
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~--~l~~L~~L~L~~n~ 159 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFA--GLTSLNELEIKALS 159 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTT--TCCEEEEEEEEETT
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhh--cccccCeeeccCCc
Confidence 99999999999999999999999999999865567889999999999999999655665 5676 68999999999999
Q ss_pred ccCcCCccccC-------------------------CCCceeeeccCCCCCCCCCch-----------------------
Q 002255 199 LQGPIPLSFGK-------------------------SSIQTLWLNGQKGDSKLNGSV----------------------- 230 (947)
Q Consensus 199 l~~~~p~~~~~-------------------------~~L~~L~l~~n~~~~~~~~~~----------------------- 230 (947)
+++.+|..++. .+|+.|++++|.+........
T Consensus 160 l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 239 (549)
T 2z81_A 160 LRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDES 239 (549)
T ss_dssp CCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHH
T ss_pred ccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhH
Confidence 99888877643 356667777766654210000
Q ss_pred -----hhhcC-----------------------------------------------------------CCCCcEEEccC
Q 002255 231 -----AVIQN-----------------------------------------------------------MTSLTQLWLHG 246 (947)
Q Consensus 231 -----~~~~~-----------------------------------------------------------l~~L~~L~L~~ 246 (947)
..+.. ..+|+.|++++
T Consensus 240 ~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~ 319 (549)
T 2z81_A 240 FNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVEN 319 (549)
T ss_dssp HHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEES
T ss_pred HHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEecc
Confidence 00000 12233333333
Q ss_pred CcCcCCCCCC-CCCCCCCEEEccCCccccCCCc---cccCCCCCCeEeccCCcccccCCCCCCCcccccccCCCCcccCc
Q 002255 247 NSFTGPLPDL-SGLSSLQDFSVRDNQLTGIVPS---SLVNLHSLAVVNLTNNLFQGQTPKFNSPVRFDMAKGSNSFCLDD 322 (947)
Q Consensus 247 N~l~~~~~~~-~~l~~L~~L~l~~N~l~g~~p~---~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~~~~~~~~~~ 322 (947)
|.++..+..+ ..+++|++|++++|++++.+|. .++.+++|++|+|++|++++..+.. ..+....+...++.
T Consensus 320 n~l~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~-----~~~~~l~~L~~L~L 394 (549)
T 2z81_A 320 SKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTG-----EILLTLKNLTSLDI 394 (549)
T ss_dssp SCCCCCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHH-----HHGGGCTTCCEEEC
T ss_pred CccccCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccch-----hhhhcCCCCCEEEC
Confidence 3333211122 2456666666666666665532 2556666666666666665432100 00111122222222
Q ss_pred CCCcCCCccceeeecccccCChhhhhccCCCCCCCCCCCCCcccCCCCceeEEEecCCCceeeccccccCCccCCeEecc
Q 002255 323 AGVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLSGTISSNFSRLTSLRQLMLS 402 (947)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g~ip~~~~~l~~L~~L~Ls 402 (947)
..+.+. ..+..+..+..+.......+. +..+......+|+.|+|++|++++.+ +.+++|++|+|+
T Consensus 395 s~N~l~-------~lp~~~~~~~~L~~L~Ls~N~----l~~l~~~~~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls 459 (549)
T 2z81_A 395 SRNTFH-------PMPDSCQWPEKMRFLNLSSTG----IRVVKTCIPQTLEVLDVSNNNLDSFS----LFLPRLQELYIS 459 (549)
T ss_dssp TTCCCC-------CCCSCCCCCTTCCEEECTTSC----CSCCCTTSCTTCSEEECCSSCCSCCC----CCCTTCCEEECC
T ss_pred CCCCCc-------cCChhhcccccccEEECCCCC----cccccchhcCCceEEECCCCChhhhc----ccCChhcEEECC
Confidence 222222 111111111111111111111 11111112357888888888888743 467888888888
Q ss_pred CCcccccCCCcCCCCCCCCccccccccccccCCCCccc----eeeecCCCCCCCCCC
Q 002255 403 GNELTGTIPKELTTLPSLEMLDVSNNHLFGKVPNFRQN----VIVKTDGNPDIGKDS 455 (947)
Q Consensus 403 ~N~l~g~iP~~l~~l~~L~~L~ls~N~l~g~iP~~~~~----~~~~~~~n~~~~~~~ 455 (947)
+|+|+ .||. ...+++|++|||++|+|++.+|..+.. ..+.+.+|++.|..+
T Consensus 460 ~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 460 RNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp SSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred CCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 88888 7886 467888888888888888888864432 246778888877653
No 257
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1.2e-35 Score=348.17 Aligned_cols=271 Identities=24% Similarity=0.352 Sum_probs=202.5
Q ss_pred hcCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEEe------CC
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCLD------GN 661 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~ 661 (947)
.++|++.++||+|+||.||+|... +|+.||||++... ......+.+.+|++++++++||||+++++++.. ++
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~-~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~ 91 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE-LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND 91 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSC-CCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence 478999999999999999999764 6899999998764 355667889999999999999999999998765 66
Q ss_pred eeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCc---EEEe
Q 002255 662 ERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMR---AKVA 738 (947)
Q Consensus 662 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~---~kl~ 738 (947)
..++||||+++|+|.+++..... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+
T Consensus 92 ~~~LVmEy~~ggsL~~~L~~~~~--~~~lse~~i~~I~~QLl~aL~yLHs---~gIVHrDLKP~NILl~~~g~~~~vKL~ 166 (676)
T 3qa8_A 92 LPLLAMEYCEGGDLRKYLNQFEN--CCGLKEGPIRTLLSDISSALRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKII 166 (676)
T ss_dssp SCCCEEECCSSCBHHHHHHSSSC--TTCCCSSHHHHHHHHHHHHHHHHHH---TTBCCCCCCSTTEEEECCSSSCEEEEC
T ss_pred eEEEEEEeCCCCCHHHHHHhccc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEeecCCCceeEEEc
Confidence 78999999999999999976432 2357888999999999999999997 89999999999999997765 9999
Q ss_pred ecCcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhhc
Q 002255 739 DFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHI 818 (947)
Q Consensus 739 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~~ 818 (947)
|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... .|......
T Consensus 167 DFG~a~~~~~~~---~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~-----~~~~~i~~ 238 (676)
T 3qa8_A 167 DLGYAKELDQGE---LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPV-----QWHGKVRE 238 (676)
T ss_dssp SCCCCCBTTSCC---CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHH-----HSSTTCC-
T ss_pred cccccccccccc---ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchh-----hhhhhhhc
Confidence 999998765432 2234679999999999999999999999999999999999999997542110 00000000
Q ss_pred Chh---hHHHHhhccCCC-------ChhcHHHHHHHHHHHHHhcccCCCCCCCHHH-----HHHHHHhhh
Q 002255 819 NKD---TFRKAIDRTIDL-------DEETLASISTVADLAGHCCAREPYQRPDMGH-----VVNVLSSLA 873 (947)
Q Consensus 819 ~~~---~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e-----vl~~L~~l~ 873 (947)
... ............ ..........+.+++.+||+.||++||++.+ ..+.+..+.
T Consensus 239 ~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL 308 (676)
T 3qa8_A 239 KSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSIL 308 (676)
T ss_dssp -----CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHH
T ss_pred ccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHH
Confidence 000 000000011100 1112234567889999999999999999988 445555554
No 258
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=2.2e-35 Score=335.65 Aligned_cols=245 Identities=17% Similarity=0.151 Sum_probs=182.0
Q ss_pred cCCCcCceecccCceEEEEEEEc-CCcEEEEEEecccc-cChHHHHHHHHHHHHHHcCCC-CCcc---------e-----
Q 002255 590 NNFSEENVLGRGGFGTVYKGELH-DGTKIAVKRMESAV-VSEKGFAEFKSEIAVLTKVRH-RHLV---------G----- 652 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h-~niv---------~----- 652 (947)
..|...++||+|+||.||+|.+. +|+.||||++.... ......+.+.+|+.+++.++| +|.. .
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 45677889999999999999864 79999999987432 223345789999999999987 3211 1
Q ss_pred -------EEEEEEe-----CCeeEEEEEecCCCchhhhhhccc--ccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCee
Q 002255 653 -------LLGYCLD-----GNERLLVYEYMPQGTLSRHLFNRK--EEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFI 718 (947)
Q Consensus 653 -------l~~~~~~-----~~~~~lV~e~~~~gsL~~~l~~~~--~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~iv 718 (947)
+..++.. ....+++|+++ +++|.+++.... ......+++..++.++.||++||+|||+ ++||
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH---TTEE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHh---CCcc
Confidence 1111111 22456777765 789998884221 1122458899999999999999999997 8999
Q ss_pred ecCCCCCcEEEcCCCcEEEeecCcceecCCCCCcceeecccccccccCcccc----------ccCCcCcccccccHHHHH
Q 002255 719 HRDLKPSNILLGDDMRAKVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYA----------VTGRVTTKVDVFSFGVIL 788 (947)
Q Consensus 719 HrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~DvwSlGvil 788 (947)
||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ ....++.++|||||||++
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil 307 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAI 307 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHH
Confidence 9999999999999999999999999875432 334577 999999998 555688999999999999
Q ss_pred HHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHHHhhccCCCChhcHHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 789 MELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKAIDRTIDLDEETLASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 789 ~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
|||++|+.||......+.. ...+..... .+..+.+|+.+||+.||++||++.++++
T Consensus 308 ~elltg~~Pf~~~~~~~~~----------------~~~~~~~~~-------~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 308 YWIWCADLPNTDDAALGGS----------------EWIFRSCKN-------IPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HHHHHSSCCCCTTGGGSCS----------------GGGGSSCCC-------CCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHHCCCCCCCcchhhhH----------------HHHHhhccc-------CCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 9999999999765432211 111111111 1255889999999999999999988865
No 259
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=3.3e-33 Score=335.65 Aligned_cols=244 Identities=15% Similarity=0.156 Sum_probs=184.3
Q ss_pred CceeEeCC----------CCcEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCcC
Q 002255 56 WKHIQCSP----------SNRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNF 124 (947)
Q Consensus 56 w~gv~C~~----------~~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~l 124 (947)
+..|.|.. ...++.|+|++|++++..|..|+++++|++|+|++|++++..| .|.++++|++|+|++|++
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 93 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPL 93 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcc
Confidence 45677853 2478999999999998888999999999999999999999887 799999999999999999
Q ss_pred CCCCcccccCCCCCcEEeccCCCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCcccCcCC
Q 002255 125 TSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIP 204 (947)
Q Consensus 125 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p 204 (947)
+++++..|+++++|++|+|++|++.+ ..+..++++++|++|++++|.+++..+..+. .+++|++|+|++|++++..|
T Consensus 94 ~~~~~~~~~~l~~L~~L~L~~n~i~~-l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~--~l~~L~~L~L~~n~l~~~~~ 170 (606)
T 3t6q_A 94 IFMAETALSGPKALKHLFFIQTGISS-IDFIPLHNQKTLESLYLGSNHISSIKLPKGF--PTEKLKVLDFQNNAIHYLSK 170 (606)
T ss_dssp SEECTTTTSSCTTCCEEECTTSCCSC-GGGSCCTTCTTCCEEECCSSCCCCCCCCTTC--CCTTCCEEECCSSCCCEECH
T ss_pred cccChhhhcccccccEeeccccCccc-CCcchhccCCcccEEECCCCcccccCccccc--CCcccCEEEcccCcccccCh
Confidence 99999999999999999999999976 4467889999999999999999874433333 37888888888888887666
Q ss_pred ccccC-CCCc--eeeeccCCCCCCCCCch---------------------------------------------------
Q 002255 205 LSFGK-SSIQ--TLWLNGQKGDSKLNGSV--------------------------------------------------- 230 (947)
Q Consensus 205 ~~~~~-~~L~--~L~l~~n~~~~~~~~~~--------------------------------------------------- 230 (947)
..++. .+|+ .|++++|.+........
T Consensus 171 ~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~ 250 (606)
T 3t6q_A 171 EDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEG 250 (606)
T ss_dssp HHHHTTTTCCSEEEECTTCCCCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGG
T ss_pred hhhhhhcccceeEEecCCCccCccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhch
Confidence 66644 4566 66777776554332211
Q ss_pred ---------------------hhhcCCCCCcEEEccCCcCcCCCCCCCCCCCCCEEEccCCccccCCCccccCCCCCCeE
Q 002255 231 ---------------------AVIQNMTSLTQLWLHGNSFTGPLPDLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVV 289 (947)
Q Consensus 231 ---------------------~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L 289 (947)
..+.++++|+.|+|++|+++..++.+..+++|++|++++|++++..|..+.++++|++|
T Consensus 251 l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 330 (606)
T 3t6q_A 251 LCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLSELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHL 330 (606)
T ss_dssp GGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCSCCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEE
T ss_pred hhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccCCCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEE
Confidence 12445666666666666666544456666666666666666666656666666666666
Q ss_pred eccCCcccccCCC
Q 002255 290 NLTNNLFQGQTPK 302 (947)
Q Consensus 290 ~Ls~N~l~g~~p~ 302 (947)
++++|.+.+.+|.
T Consensus 331 ~l~~n~~~~~~~~ 343 (606)
T 3t6q_A 331 SIKGNTKRLELGT 343 (606)
T ss_dssp ECCSCSSCCBCCS
T ss_pred ECCCCCcccccch
Confidence 6666666655543
No 260
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=4.2e-34 Score=311.04 Aligned_cols=231 Identities=20% Similarity=0.312 Sum_probs=178.6
Q ss_pred HhcCCCcC-ceecccCceEEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHH-HcCCCCCcceEEEEEEe----C
Q 002255 588 VTNNFSEE-NVLGRGGFGTVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVL-TKVRHRHLVGLLGYCLD----G 660 (947)
Q Consensus 588 ~~~~~~~~-~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~----~ 660 (947)
+.++|.+. ++||+|+||.||+|... +++.||+|++... ..+.+|+.++ +..+||||+++++++.. +
T Consensus 15 ~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~ 87 (299)
T 3m2w_A 15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAGR 87 (299)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred cccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCC
Confidence 34667776 78999999999999874 6899999998643 3567888888 55699999999999987 6
Q ss_pred CeeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcC---CCcEEE
Q 002255 661 NERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGD---DMRAKV 737 (947)
Q Consensus 661 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~---~~~~kl 737 (947)
...++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++. ++.+||
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~kl 161 (299)
T 3m2w_A 88 KCLLIVMECLDGGELFSRIQDRGD---QAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKL 161 (299)
T ss_dssp EEEEEEECCCCSCBHHHHHHHCTT---CCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEE
T ss_pred ceEEEEEeecCCCcHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEecCCCCCcEEE
Confidence 778999999999999999976432 358999999999999999999997 89999999999999998 789999
Q ss_pred eecCcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCCccCccchhhHHHHHHHhh
Q 002255 738 ADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMH 817 (947)
Q Consensus 738 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~~~~~~~~~~l~~~~~~~~ 817 (947)
+|||+++... +..++.++|||||||++|||++|+.||.........
T Consensus 162 ~Dfg~a~~~~------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~---------- 207 (299)
T 3m2w_A 162 TDFGFAKETT------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS---------- 207 (299)
T ss_dssp CCCTTCEECT------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-----------------
T ss_pred eccccccccc------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh----------
Confidence 9999986542 235678999999999999999999999754322100
Q ss_pred cChhhHHHHhhccCCCChhc-HHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002255 818 INKDTFRKAIDRTIDLDEET-LASISTVADLAGHCCAREPYQRPDMGHVVN 867 (947)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 867 (947)
.................. ......+.+++.+||+.||++||++.|+++
T Consensus 208 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 208 --PGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp --CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred --HHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 000000000111111100 123456889999999999999999999987
No 261
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=6.8e-33 Score=329.23 Aligned_cols=137 Identities=18% Similarity=0.197 Sum_probs=117.1
Q ss_pred CCcEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEe
Q 002255 64 SNRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTIS 142 (947)
Q Consensus 64 ~~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 142 (947)
..+++.|+|++|++++..|..|.++++|++|+|++|++++..| .|.++++|++|+|++|+++.++.. .+++|++|+
T Consensus 51 ~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~---~l~~L~~L~ 127 (562)
T 3a79_B 51 PPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQNISCC---PMASLRHLD 127 (562)
T ss_dssp CTTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCCEECSC---CCTTCSEEE
T ss_pred CCCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCCccCcc---ccccCCEEE
Confidence 3689999999999998888899999999999999999999877 699999999999999999988876 799999999
Q ss_pred ccCCCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCc--cEEEccCCcc--cCcCCcccc
Q 002255 143 LDYNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGL--MHLHLAFNFL--QGPIPLSFG 208 (947)
Q Consensus 143 Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L--~~L~Ls~N~l--~~~~p~~~~ 208 (947)
|++|++....+|..++++++|++|++++|.+++.. +. .+++| ++|+|++|++ ++..|..+.
T Consensus 128 Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~~---~~--~l~~L~L~~L~L~~n~l~~~~~~~~~l~ 192 (562)
T 3a79_B 128 LSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQLD---LL--PVAHLHLSCILLDLVSYHIKGGETESLQ 192 (562)
T ss_dssp CCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTTT---TG--GGTTSCEEEEEEEESSCCCCSSSCCEEE
T ss_pred CCCCCccccCchHhhcccCcccEEecCCCccccCc---hh--hhhhceeeEEEeecccccccccCccccc
Confidence 99999987556789999999999999999998632 22 34455 8888888888 666665553
No 262
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.3e-33 Score=325.25 Aligned_cols=325 Identities=17% Similarity=0.178 Sum_probs=280.4
Q ss_pred eeEeCCCCcEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCcCCCCCcccccCCC
Q 002255 58 HIQCSPSNRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNFTSVPSDFFKGLT 136 (947)
Q Consensus 58 gv~C~~~~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 136 (947)
+..|... ...+++.+++++ .+|..+. ++|+.|+|++|++++..+ .|.++++|++|+|++|.++++.+..|.+++
T Consensus 6 ~C~C~~~--~~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~ 80 (477)
T 2id5_A 6 RCECSAQ--DRAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLF 80 (477)
T ss_dssp TCEEETT--TTEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred CCeECCC--CCEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCc
Confidence 4457543 246889999988 7787664 689999999999999887 799999999999999999999999999999
Q ss_pred CCcEEeccCCCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCcccCcCCccccC-CCCcee
Q 002255 137 SLQTISLDYNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGK-SSIQTL 215 (947)
Q Consensus 137 ~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L 215 (947)
+|++|+|++|++.. ..+..|.++++|++|+|++|.+++..|..|. .+++|++|+|++|++++..+..|.. .+|+.|
T Consensus 81 ~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~--~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 157 (477)
T 2id5_A 81 NLRTLGLRSNRLKL-IPLGVFTGLSNLTKLDISENKIVILLDYMFQ--DLYNLKSLEVGDNDLVYISHRAFSGLNSLEQL 157 (477)
T ss_dssp TCCEEECCSSCCCS-CCTTSSTTCTTCCEEECTTSCCCEECTTTTT--TCTTCCEEEECCTTCCEECTTSSTTCTTCCEE
T ss_pred cCCEEECCCCcCCc-cCcccccCCCCCCEEECCCCccccCChhHcc--ccccCCEEECCCCccceeChhhccCCCCCCEE
Confidence 99999999999976 4445689999999999999999999998887 7999999999999999888888865 789999
Q ss_pred eeccCCCCCCCCCchhhhcCCCCCcEEEccCCcCcCCCC-CCCCCCCCCEEEccCCccccCCCccccCCCCCCeEeccCC
Q 002255 216 WLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPLP-DLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNN 294 (947)
Q Consensus 216 ~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N 294 (947)
+|++|.+.... ...+.++++|+.|+|++|.+++..+ .+..+++|+.|++++|.+.+.+|..+....+|+.|+|++|
T Consensus 158 ~l~~n~l~~~~---~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n 234 (477)
T 2id5_A 158 TLEKCNLTSIP---TEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHC 234 (477)
T ss_dssp EEESCCCSSCC---HHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESS
T ss_pred ECCCCcCcccC---hhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCC
Confidence 99999877543 3457789999999999999998777 4888999999999999988888888888889999999999
Q ss_pred cccccCCCCCCCcccccccCCCCcccCcCCCcCCCccceeeecccccCChhhhhccCCCCCCCCCCCCCcccCCCCceeE
Q 002255 295 LFQGQTPKFNSPVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAGGNITV 374 (947)
Q Consensus 295 ~l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~ 374 (947)
++++..+. .+..+.+|+.
T Consensus 235 ~l~~~~~~--------------------------------------------------------------~~~~l~~L~~ 252 (477)
T 2id5_A 235 NLTAVPYL--------------------------------------------------------------AVRHLVYLRF 252 (477)
T ss_dssp CCCSCCHH--------------------------------------------------------------HHTTCTTCCE
T ss_pred cccccCHH--------------------------------------------------------------HhcCccccCe
Confidence 98743221 1123457999
Q ss_pred EEecCCCceeeccccccCCccCCeEeccCCcccccCCCcCCCCCCCCccccccccccccCCCCccc----eeeecCCCCC
Q 002255 375 VNLKNLGLSGTISSNFSRLTSLRQLMLSGNELTGTIPKELTTLPSLEMLDVSNNHLFGKVPNFRQN----VIVKTDGNPD 450 (947)
Q Consensus 375 L~Ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ls~N~l~g~iP~~~~~----~~~~~~~n~~ 450 (947)
|+|++|.+++..+..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..+.. ..+.+.+|++
T Consensus 253 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 332 (477)
T 2id5_A 253 LNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPL 332 (477)
T ss_dssp EECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCE
T ss_pred eECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCc
Confidence 999999999988899999999999999999999999999999999999999999999877754332 3577899999
Q ss_pred CCCCC
Q 002255 451 IGKDS 455 (947)
Q Consensus 451 ~~~~~ 455 (947)
.|...
T Consensus 333 ~c~c~ 337 (477)
T 2id5_A 333 ACDCR 337 (477)
T ss_dssp ECSGG
T ss_pred cCccc
Confidence 98754
No 263
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=5.3e-33 Score=338.55 Aligned_cols=375 Identities=18% Similarity=0.132 Sum_probs=268.3
Q ss_pred CCCceeEeCC----------CCcEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCC
Q 002255 54 CKWKHIQCSP----------SNRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDN 122 (947)
Q Consensus 54 C~w~gv~C~~----------~~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n 122 (947)
|.+..|.|+. ..+++.|+|++|++++..+..|.++++|++|+|++|.+++.+| .|.++++|++|+|++|
T Consensus 4 ~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 83 (680)
T 1ziw_A 4 VSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHN 83 (680)
T ss_dssp CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSS
T ss_pred eECCeeECCCCCccccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCC
Confidence 4455566642 2479999999999998777889999999999999999999888 6899999999999999
Q ss_pred cCCCCCcccccCCCCCcEEeccCCCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCcccCc
Q 002255 123 NFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGP 202 (947)
Q Consensus 123 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~ 202 (947)
+++++++..|.++++|++|+|++|++.+ ..|..++++++|++|++++|.+++..|..++ .+++|++|+|++|++++.
T Consensus 84 ~l~~l~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~--~l~~L~~L~L~~n~l~~~ 160 (680)
T 1ziw_A 84 ELSQLSDKTFAFCTNLTELHLMSNSIQK-IKNNPFVKQKNLITLDLSHNGLSSTKLGTQV--QLENLQELLLSNNKIQAL 160 (680)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCCCC-CCSCTTTTCTTCCEEECCSSCCSCCCCCSSS--CCTTCCEEECCSSCCCCB
T ss_pred ccCccChhhhccCCCCCEEECCCCccCc-cChhHccccCCCCEEECCCCcccccCchhhc--ccccCCEEEccCCccccc
Confidence 9999999999999999999999999975 5568899999999999999999999888887 799999999999999987
Q ss_pred CCcccc---CCCCceeeeccCCCCCCCCCchhhhcC------------------------CCCCcEEEccCCcCcCCCCC
Q 002255 203 IPLSFG---KSSIQTLWLNGQKGDSKLNGSVAVIQN------------------------MTSLTQLWLHGNSFTGPLPD 255 (947)
Q Consensus 203 ~p~~~~---~~~L~~L~l~~n~~~~~~~~~~~~~~~------------------------l~~L~~L~L~~N~l~~~~~~ 255 (947)
.+..+. ..+|+.|++++|.+..........+.+ .++|+.|+|++|.+++..|.
T Consensus 161 ~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~ 240 (680)
T 1ziw_A 161 KSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNT 240 (680)
T ss_dssp CHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTT
T ss_pred CHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChh
Confidence 776553 368999999999888766554433222 26788889999999887774
Q ss_pred -CCCCC--CCCEEEccCCccccCCCccccCCCCCCeEeccCCcccccCCCCCCCcc-cccccC-----------------
Q 002255 256 -LSGLS--SLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQTPKFNSPVR-FDMAKG----------------- 314 (947)
Q Consensus 256 -~~~l~--~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~-~~~~~~----------------- 314 (947)
+.+++ +|+.|++++|++++..|..|.++++|++|+|++|++++.+|..+.... +.....
T Consensus 241 ~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i 320 (680)
T 1ziw_A 241 TFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKI 320 (680)
T ss_dssp TTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEE
T ss_pred HhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhccccccccccc
Confidence 66664 499999999999988888899999999999999999988876544322 110000
Q ss_pred --------CCCcccCcCCCcCCCccceeeecccccCChhhhhccCCCCCCC-CCCCCCccc--CCCCceeEEEecCCCce
Q 002255 315 --------SNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPC-NSDWKGVSC--DAGGNITVVNLKNLGLS 383 (947)
Q Consensus 315 --------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~-~~~~~~~~~--~~~~~L~~L~Ls~n~l~ 383 (947)
.+...++...+.+..... ..+.....+.......+.. ........+ -...+|+.|+|++|+++
T Consensus 321 ~~~~~~~l~~L~~L~l~~n~l~~~~~------~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~ 394 (680)
T 1ziw_A 321 DDFSFQWLKCLEHLNMEDNDIPGIKS------NMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKIS 394 (680)
T ss_dssp CTTTTTTCTTCCEEECCSCCBCCCCT------TTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCC
T ss_pred ChhhcccCCCCCEEECCCCccCCCCh------hHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCC
Confidence 111111111111111000 0000001111111100000 000000000 01136777777777777
Q ss_pred eeccccccCCccCCeEeccCCcccccCC-CcCCCCCCCCccccccccccccCCCC
Q 002255 384 GTISSNFSRLTSLRQLMLSGNELTGTIP-KELTTLPSLEMLDVSNNHLFGKVPNF 437 (947)
Q Consensus 384 g~ip~~~~~l~~L~~L~Ls~N~l~g~iP-~~l~~l~~L~~L~ls~N~l~g~iP~~ 437 (947)
+..|..|..+++|+.|+|++|++++.+| ..+..+++|++|++++|++++..|..
T Consensus 395 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~ 449 (680)
T 1ziw_A 395 KIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNS 449 (680)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTT
T ss_pred eEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhh
Confidence 7777777777788888888888777676 56777777777888877777665543
No 264
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.1e-33 Score=330.93 Aligned_cols=348 Identities=17% Similarity=0.175 Sum_probs=220.2
Q ss_pred cEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEecc
Q 002255 66 RVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLD 144 (947)
Q Consensus 66 ~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 144 (947)
+++.|+|++|++++..+..|.++++|++|+|++|++++..+ .|.++++|++|+|++|+++++++..|..+++|++|+|+
T Consensus 29 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 108 (570)
T 2z63_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (570)
T ss_dssp SCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred cccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccccc
Confidence 56677777777776666667777777777777777766655 56677777777777777777766667777777777777
Q ss_pred CCCCCCCCCcccccCCCCCCeEeccCceeee-ccCcccCCCCCCCccEEEccCCcccCcCCcccc---------------
Q 002255 145 YNSFDSWVIPESLKDATGLQRFSANGANITG-TIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFG--------------- 208 (947)
Q Consensus 145 ~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~-~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--------------- 208 (947)
+|++.. ..+..++++++|++|++++|.+++ .+|..++ .+++|++|++++|++++..|..++
T Consensus 109 ~n~l~~-l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~--~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~ 185 (570)
T 2z63_A 109 ETNLAS-LENFPIGHLKTLKELNVAHNLIQSFKLPEYFS--NLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLS 185 (570)
T ss_dssp TSCCCC-STTCSCTTCTTCCEEECCSSCCCCCCCCGGGG--GCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECT
T ss_pred cccccc-CCCccccccccccEEecCCCccceecChhhhc--ccCCCCEEeCcCCccceecHHHccchhccchhhhhcccC
Confidence 776654 222346666666666666666665 3566665 466666666666666544333222
Q ss_pred -------------CCCCcee------------------------------------------------------------
Q 002255 209 -------------KSSIQTL------------------------------------------------------------ 215 (947)
Q Consensus 209 -------------~~~L~~L------------------------------------------------------------ 215 (947)
..+|+.|
T Consensus 186 ~n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~ 265 (570)
T 2z63_A 186 LNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLA 265 (570)
T ss_dssp TCCCCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEE
T ss_pred CCCceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhh
Confidence 1122222
Q ss_pred ----------------------eeccCCCCCCCCC----------------------chh----------------hhcC
Q 002255 216 ----------------------WLNGQKGDSKLNG----------------------SVA----------------VIQN 235 (947)
Q Consensus 216 ----------------------~l~~n~~~~~~~~----------------------~~~----------------~~~~ 235 (947)
++++|.+...... ... ....
T Consensus 266 ~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~ 345 (570)
T 2z63_A 266 YLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVD 345 (570)
T ss_dssp ETTEEESCSTTTTGGGTTCSEEEEESCEECSCCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCB
T ss_pred cchhhhhhchhhhcCcCcccEEEecCccchhhhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCcccccccccc
Confidence 2222222111000 000 0023
Q ss_pred CCCCcEEEccCCcCcCCC--C-CCCCCCCCCEEEccCCccccCCCccccCCCCCCeEeccCCcccccCCC-CCCCccccc
Q 002255 236 MTSLTQLWLHGNSFTGPL--P-DLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQTPK-FNSPVRFDM 311 (947)
Q Consensus 236 l~~L~~L~L~~N~l~~~~--~-~~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~~~~~~ 311 (947)
+++|+.|+|++|++++.. + .+.++++|++|++++|++++. |..+..+++|+.|++++|.+++.+|. .+..
T Consensus 346 ~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~----- 419 (570)
T 2z63_A 346 LPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITM-SSNFLGLEQLEHLDFQHSNLKQMSEFSVFLS----- 419 (570)
T ss_dssp CTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEE-EEEEETCTTCCEEECTTSEEESCTTSCTTTT-----
T ss_pred CCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccc-cccccccCCCCEEEccCCccccccchhhhhc-----
Confidence 455666666666666542 2 356788999999999999965 44599999999999999999987663 2211
Q ss_pred ccCCCCcccCcCCCcCCCccceeeecccccCChhhhhccCCCCCCCCCCCCCcccCCCCceeEEEecCCCce-eeccccc
Q 002255 312 AKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLS-GTISSNF 390 (947)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~-g~ip~~~ 390 (947)
..+...++...+.+.... ...+..+++|+.|+|++|.++ +.+|..+
T Consensus 420 --l~~L~~L~l~~n~l~~~~-------------------------------~~~~~~l~~L~~L~l~~n~l~~~~~p~~~ 466 (570)
T 2z63_A 420 --LRNLIYLDISHTHTRVAF-------------------------------NGIFNGLSSLEVLKMAGNSFQENFLPDIF 466 (570)
T ss_dssp --CTTCCEEECTTSCCEECC-------------------------------TTTTTTCTTCCEEECTTCEEGGGEECSCC
T ss_pred --CCCCCEEeCcCCcccccc-------------------------------hhhhhcCCcCcEEECcCCcCccccchhhh
Confidence 112222222222111000 011233567888888888887 6788888
Q ss_pred cCCccCCeEeccCCcccccCCCcCCCCCCCCccccccccccccCCCCccc----eeeecCCCCCCCCCC
Q 002255 391 SRLTSLRQLMLSGNELTGTIPKELTTLPSLEMLDVSNNHLFGKVPNFRQN----VIVKTDGNPDIGKDS 455 (947)
Q Consensus 391 ~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ls~N~l~g~iP~~~~~----~~~~~~~n~~~~~~~ 455 (947)
+.+++|+.|+|++|++++..|..+..+++|++|+|++|++++.+|..+.. ..+.+.+|++.|..+
T Consensus 467 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 467 TELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp TTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred hcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCc
Confidence 88888888888888888777888888888888888888888877754432 245677888877654
No 265
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=4.9e-33 Score=327.63 Aligned_cols=127 Identities=17% Similarity=0.224 Sum_probs=102.5
Q ss_pred CcEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEec
Q 002255 65 NRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISL 143 (947)
Q Consensus 65 ~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (947)
.+++.|+|++|++++..|..|.++++|++|+|++|++++..| .|.++++|++|+|++|+++.++.. .+++|++|+|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~---~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVKISCH---PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCEEECC---CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCceeecCcc---ccCCccEEec
Confidence 578899999999987777889999999999999999988877 788899999999999999987765 7889999999
Q ss_pred cCCCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCc--cEEEccCCcc
Q 002255 144 DYNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGL--MHLHLAFNFL 199 (947)
Q Consensus 144 s~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L--~~L~Ls~N~l 199 (947)
++|++.+..+|..++++++|++|++++|.+++. .+. .+++| ++|+|++|++
T Consensus 98 ~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~---~~~--~l~~L~L~~L~l~~n~l 150 (520)
T 2z7x_B 98 SFNAFDALPICKEFGNMSQLKFLGLSTTHLEKS---SVL--PIAHLNISKVLLVLGET 150 (520)
T ss_dssp CSSCCSSCCCCGGGGGCTTCCEEEEEESSCCGG---GGG--GGTTSCEEEEEEEECTT
T ss_pred cCCccccccchhhhccCCcceEEEecCcccchh---hcc--ccccceeeEEEeecccc
Confidence 999987656788899999999999988888652 222 24444 5666666555
No 266
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2.7e-33 Score=324.08 Aligned_cols=309 Identities=19% Similarity=0.233 Sum_probs=250.0
Q ss_pred CcEEEEEecCCcccccCc-ccccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCcCCCCCc--ccccCCCCCcE
Q 002255 65 NRVTRIQIGGQNIEGTLP-KELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNFTSVPS--DFFKGLTSLQT 140 (947)
Q Consensus 65 ~~v~~l~L~~~~l~g~~p-~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~l~~~~~--~~~~~l~~L~~ 140 (947)
.+++.|+|++|.+.+.++ ..|.++++|++|+|++|++++.+| .|.++++|++|+|++|++++..+ ..|..+++|++
T Consensus 54 ~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~ 133 (455)
T 3v47_A 54 QDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEM 133 (455)
T ss_dssp TTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCE
T ss_pred ccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCE
Confidence 479999999999987774 569999999999999999999877 79999999999999999998443 44899999999
Q ss_pred EeccCCCCCCCCCccc-ccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCcccCcCCcccc---------CC
Q 002255 141 ISLDYNSFDSWVIPES-LKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFG---------KS 210 (947)
Q Consensus 141 L~Ls~N~l~~~~~p~~-~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~---------~~ 210 (947)
|+|++|++.+ ..|.. +.++++|++|++++|.+++..|..+......+|+.|++++|.+.+..+..++ ..
T Consensus 134 L~L~~n~l~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~ 212 (455)
T 3v47_A 134 LVLRDNNIKK-IQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNT 212 (455)
T ss_dssp EECCSSBCCS-CCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTC
T ss_pred EECCCCccCc-cCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccc
Confidence 9999999976 45655 8999999999999999999888877632224566666666666544333221 13
Q ss_pred CCceeeeccCCCCCCCCCch----------------------------------hhhc--CCCCCcEEEccCCcCcCCCC
Q 002255 211 SIQTLWLNGQKGDSKLNGSV----------------------------------AVIQ--NMTSLTQLWLHGNSFTGPLP 254 (947)
Q Consensus 211 ~L~~L~l~~n~~~~~~~~~~----------------------------------~~~~--~l~~L~~L~L~~N~l~~~~~ 254 (947)
+|+.|++++|.+........ ..+. ..++|+.|+|++|.+++.+|
T Consensus 213 ~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~ 292 (455)
T 3v47_A 213 SITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLK 292 (455)
T ss_dssp EEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECT
T ss_pred eeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccch
Confidence 45555665555432111000 0111 23689999999999999888
Q ss_pred C-CCCCCCCCEEEccCCccccCCCccccCCCCCCeEeccCCcccccCCCCCCCcccccccCCCCcccCcCCCcCCCccce
Q 002255 255 D-LSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQTPKFNSPVRFDMAKGSNSFCLDDAGVACDGRVNV 333 (947)
Q Consensus 255 ~-~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (947)
. +..+++|++|+|++|++++..|..|.++++|++|+|++|++++..|..+
T Consensus 293 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~----------------------------- 343 (455)
T 3v47_A 293 SVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMF----------------------------- 343 (455)
T ss_dssp TTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGG-----------------------------
T ss_pred hhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHh-----------------------------
Confidence 5 8889999999999999999889999999999999999999987655421
Q ss_pred eeecccccCChhhhhccCCCCCCCCCCCCCcccCCCCceeEEEecCCCceeeccccccCCccCCeEeccCCcccccCCCc
Q 002255 334 LLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLSGTISSNFSRLTSLRQLMLSGNELTGTIPKE 413 (947)
Q Consensus 334 ~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~ 413 (947)
..+.+|+.|+|++|++++..|..|+++++|++|+|++|+|++..+..
T Consensus 344 ---------------------------------~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 390 (455)
T 3v47_A 344 ---------------------------------ENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGI 390 (455)
T ss_dssp ---------------------------------TTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTT
T ss_pred ---------------------------------cCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhH
Confidence 22357999999999999999999999999999999999999655567
Q ss_pred CCCCCCCCccccccccccccCCC
Q 002255 414 LTTLPSLEMLDVSNNHLFGKVPN 436 (947)
Q Consensus 414 l~~l~~L~~L~ls~N~l~g~iP~ 436 (947)
+..+++|+.|+|++|+++|.+|.
T Consensus 391 ~~~l~~L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 391 FDRLTSLQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp TTTCTTCCEEECCSSCBCCCTTT
T ss_pred hccCCcccEEEccCCCcccCCCc
Confidence 89999999999999999999995
No 267
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.4e-32 Score=330.19 Aligned_cols=302 Identities=19% Similarity=0.204 Sum_probs=195.4
Q ss_pred CCcEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEE
Q 002255 113 SLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHL 192 (947)
Q Consensus 113 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L 192 (947)
+|++|++++|.++++++..|..+++|++|+|++|++. .+|..+..+++|++|++++|.+++..|..+. .+++|++|
T Consensus 255 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~--~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~--~l~~L~~L 330 (606)
T 3t6q_A 255 SVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS--ELPSGLVGLSTLKKLVLSANKFENLCQISAS--NFPSLTHL 330 (606)
T ss_dssp EEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS--CCCSSCCSCTTCCEEECTTCCCSBGGGGCGG--GCTTCSEE
T ss_pred ceeEEEeecCccCccCHHHhccccCCCEEeccCCccC--CCChhhcccccCCEEECccCCcCcCchhhhh--ccCcCCEE
Confidence 4555555555666666666666666666666666665 3566666666666666666666665565555 46666666
Q ss_pred EccCCcccCcCCcc-ccC-CCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccCCcCcCCCCC-CCCCCCCCEEEccC
Q 002255 193 HLAFNFLQGPIPLS-FGK-SSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPLPD-LSGLSSLQDFSVRD 269 (947)
Q Consensus 193 ~Ls~N~l~~~~p~~-~~~-~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~l~~ 269 (947)
+|++|.+.+.+|.. +.. .+|+.|++++|.+..... ....+.++++|+.|+|++|.+++..|. +..+++|++|++++
T Consensus 331 ~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 409 (606)
T 3t6q_A 331 SIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDC-CNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAF 409 (606)
T ss_dssp ECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEE-STTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTT
T ss_pred ECCCCCcccccchhhhhccCcCCEEECCCCccccccC-cchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCC
Confidence 66666666555543 333 556666666666544320 012345566666666666666665553 55666666666666
Q ss_pred CccccCCCcc-ccCCCCCCeEeccCCcccccCCCCCCCcccccccCCCCcccCcCCCcCCCccceeeecccccCChhhhh
Q 002255 270 NQLTGIVPSS-LVNLHSLAVVNLTNNLFQGQTPKFNSPVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVLA 348 (947)
Q Consensus 270 N~l~g~~p~~-l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~ 348 (947)
|++++..|.. +.++++|+.|+|++|.+++.+|..+.... +...++...+.+.+..
T Consensus 410 n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~-------~L~~L~L~~n~l~~~~----------------- 465 (606)
T 3t6q_A 410 TRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLP-------ALQHLNLQGNHFPKGN----------------- 465 (606)
T ss_dssp CCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCT-------TCCEEECTTCBCGGGE-----------------
T ss_pred CcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCC-------CCCEEECCCCCCCccc-----------------
Confidence 6666554433 66666666666666666665555432211 1112222211111000
Q ss_pred ccCCCCCCCCCCCCCcccCCCCceeEEEecCCCceeeccccccCCccCCeEeccCCcccccCCCcCCCCCCCCccccccc
Q 002255 349 ESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLSGTISSNFSRLTSLRQLMLSGNELTGTIPKELTTLPSLEMLDVSNN 428 (947)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ls~N 428 (947)
......+..+++|+.|+|++|.+++..|..|+++++|+.|+|++|++++.+|..+..+++| .|+|++|
T Consensus 466 -----------~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N 533 (606)
T 3t6q_A 466 -----------IQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASN 533 (606)
T ss_dssp -----------ECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSS
T ss_pred -----------cccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCC
Confidence 0000123345789999999999999999999999999999999999999999999999999 9999999
Q ss_pred cccccCCCCccc----eeeecCCCCCCCCCC
Q 002255 429 HLFGKVPNFRQN----VIVKTDGNPDIGKDS 455 (947)
Q Consensus 429 ~l~g~iP~~~~~----~~~~~~~n~~~~~~~ 455 (947)
++++.+|..+.. ..+.+.+||+.|..+
T Consensus 534 ~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 534 HISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp CCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred cccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 999998875432 367889999998653
No 268
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=8.4e-35 Score=322.21 Aligned_cols=240 Identities=16% Similarity=0.198 Sum_probs=185.8
Q ss_pred hcCCCcCceecccCceEEEEEEEcCCcEEEEEEeccccc------ChHHHHHHHHHHHHHHcCC---------CCCcceE
Q 002255 589 TNNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVV------SEKGFAEFKSEIAVLTKVR---------HRHLVGL 653 (947)
Q Consensus 589 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~------~~~~~~~~~~E~~~l~~l~---------h~niv~l 653 (947)
.++|++.+.||+|+||.||+|+. +|+.||||++..... .....+.+.+|+.+++.++ |||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 46788999999999999999988 589999999976532 2233477889999999886 8888888
Q ss_pred EEEEE------------------------------eCCeeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHH
Q 002255 654 LGYCL------------------------------DGNERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVA 703 (947)
Q Consensus 654 ~~~~~------------------------------~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~ 703 (947)
.+++. .++..++||||+++|++.+.+.. ..+++.++..++.||+
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~------~~~~~~~~~~i~~qi~ 171 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT------KLSSLATAKSILHQLT 171 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT------TCCCHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh------cCCCHHHHHHHHHHHH
Confidence 87653 26789999999999987776633 3478999999999999
Q ss_pred HHHHHHh-hccCCCeeecCCCCCcEEEcCCC--------------------cEEEeecCcceecCCCCCcceeecccccc
Q 002255 704 RGVEYLH-GLAHQSFIHRDLKPSNILLGDDM--------------------RAKVADFGLVRLAPDNGKHSIETRLAGTF 762 (947)
Q Consensus 704 ~~L~~LH-~~~~~~ivHrDlkp~Nill~~~~--------------------~~kl~DfGla~~~~~~~~~~~~~~~~gt~ 762 (947)
.||+||| + ++|+||||||+|||++.++ .+||+|||+|+..... ...||+
T Consensus 172 ~aL~~lH~~---~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-------~~~gt~ 241 (336)
T 2vuw_A 172 ASLAVAEAS---LRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-------IVVFCD 241 (336)
T ss_dssp HHHHHHHHH---HCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-------EEECCC
T ss_pred HHHHHHHHh---CCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-------cEEEee
Confidence 9999999 7 7999999999999999887 9999999999876432 237999
Q ss_pred cccCccccccCCcCcccccccHHHH-HHHHHhCCCCCCccCccchhhHHHHHHHhhcChhhHHHHhh----ccCCCChhc
Q 002255 763 GYLAPEYAVTGRVTTKVDVFSFGVI-LMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKAID----RTIDLDEET 837 (947)
Q Consensus 763 ~y~aPE~~~~~~~~~~~DvwSlGvi-l~elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 837 (947)
.|+|||++.+.. +.++||||+|++ .+++++|..||.... |... ....++. .........
T Consensus 242 ~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~---------~~~~------~~~~~~~~~~~~~~~~~~~~ 305 (336)
T 2vuw_A 242 VSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVL---------WLHY------LTDKMLKQMTFKTKCNTPAM 305 (336)
T ss_dssp CTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHH---------HHHH------HHHHHHHTCCCSSCCCSHHH
T ss_pred cccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchh---------hhhH------HHHhhhhhhccCcccchhhh
Confidence 999999998655 899999998777 778888999884311 1000 0111111 111112223
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 002255 838 LASISTVADLAGHCCAREPYQRPDMGHVV 866 (947)
Q Consensus 838 ~~~~~~l~~li~~cl~~dP~~RPs~~evl 866 (947)
.....++.+|+.+||+.| |+.|++
T Consensus 306 ~~~s~~~~dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 306 KQIKRKIQEFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp HHHHHHHHHHHHHGGGSS-----SHHHHH
T ss_pred hhcCHHHHHHHHHHhccC-----CHHHHH
Confidence 345667889999999976 888887
No 269
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=3.2e-32 Score=329.12 Aligned_cols=351 Identities=19% Similarity=0.175 Sum_probs=266.9
Q ss_pred CcEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEec
Q 002255 65 NRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISL 143 (947)
Q Consensus 65 ~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (947)
..++.|||++|+|++..+.+|.++++|++|+|++|+|++.+| .|.+|++|++|+|++|+|+++++..|.++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 368999999999997777889999999999999999999888 7999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCcccccCCCCCCeEeccCceeee-ccCcccCCCCCCCccEEEccCCcccCcCCccccC-------------
Q 002255 144 DYNSFDSWVIPESLKDATGLQRFSANGANITG-TIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGK------------- 209 (947)
Q Consensus 144 s~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~-~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~------------- 209 (947)
++|++.+ ..+..|+++++|++|+|++|.+++ .+|..++ .+++|++|+|++|++++..|..+..
T Consensus 132 s~N~l~~-l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~--~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~l 208 (635)
T 4g8a_A 132 VETNLAS-LENFPIGHLKTLKELNVAHNLIQSFKLPEYFS--NLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDL 208 (635)
T ss_dssp TTSCCCC-STTCCCTTCTTCCEEECCSSCCCCCCCCGGGG--GCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEEC
T ss_pred CCCcCCC-CChhhhhcCcccCeeccccCccccCCCchhhc--cchhhhhhcccCccccccccccccchhhhhhhhhhhhc
Confidence 9999976 455679999999999999999976 4677776 6899999999999998765544321
Q ss_pred ---------------CC---------------------------------------------------------------
Q 002255 210 ---------------SS--------------------------------------------------------------- 211 (947)
Q Consensus 210 ---------------~~--------------------------------------------------------------- 211 (947)
..
T Consensus 209 s~n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~ 288 (635)
T 4g8a_A 209 SLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRL 288 (635)
T ss_dssp TTCCCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEE
T ss_pred ccCcccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhh
Confidence 00
Q ss_pred -----------------------------------------CceeeeccCCCCCCCCCc----------------hhhhc
Q 002255 212 -----------------------------------------IQTLWLNGQKGDSKLNGS----------------VAVIQ 234 (947)
Q Consensus 212 -----------------------------------------L~~L~l~~n~~~~~~~~~----------------~~~~~ 234 (947)
++.|++.+|.+....... .....
T Consensus 289 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~ 368 (635)
T 4g8a_A 289 AYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEV 368 (635)
T ss_dssp ECCCSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCC
T ss_pred hhhcccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccc
Confidence 111111111111000000 00112
Q ss_pred CCCCCcEEEccCCcCcC--------------------------CCCCCCCCCCCCEEEccCCccccCCC-ccccCCCCCC
Q 002255 235 NMTSLTQLWLHGNSFTG--------------------------PLPDLSGLSSLQDFSVRDNQLTGIVP-SSLVNLHSLA 287 (947)
Q Consensus 235 ~l~~L~~L~L~~N~l~~--------------------------~~~~~~~l~~L~~L~l~~N~l~g~~p-~~l~~l~~L~ 287 (947)
++++|+.|++++|.+.. ..+.+..+++|+.+++..|++....+ ..+..+++|+
T Consensus 369 ~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~ 448 (635)
T 4g8a_A 369 DLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLI 448 (635)
T ss_dssp BCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCC
T ss_pred cccccccchhhccccccccccccchhhhhhhhhhhccccccccccccccccccccchhhhhccccccccccccccccccc
Confidence 35677888888877643 22346678899999999998876554 5578899999
Q ss_pred eEeccCCcccccCCCCCCCcccccccCCCCcccCcCCCcCCCccceeeecccccCChhhhhccCCCCCCCCCCCCCcccC
Q 002255 288 VVNLTNNLFQGQTPKFNSPVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCD 367 (947)
Q Consensus 288 ~L~Ls~N~l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~ 367 (947)
.+++++|.+++..|..+.... ....++...+... .. +..-.+.
T Consensus 449 ~l~ls~n~l~~~~~~~~~~~~-------~L~~L~Ls~N~~~-------~~-----------------------~~~~~~~ 491 (635)
T 4g8a_A 449 YLDISHTHTRVAFNGIFNGLS-------SLEVLKMAGNSFQ-------EN-----------------------FLPDIFT 491 (635)
T ss_dssp EEECTTSCCEECCTTTTTTCT-------TCCEEECTTCEEG-------GG-----------------------EECSCCT
T ss_pred cccccccccccccccccccch-------hhhhhhhhhcccc-------cc-----------------------cCchhhh
Confidence 999999999988776543222 1111111111000 00 0001123
Q ss_pred CCCceeEEEecCCCceeeccccccCCccCCeEeccCCcccccCCCcCCCCCCCCccccccccccccCCCCccce-----e
Q 002255 368 AGGNITVVNLKNLGLSGTISSNFSRLTSLRQLMLSGNELTGTIPKELTTLPSLEMLDVSNNHLFGKVPNFRQNV-----I 442 (947)
Q Consensus 368 ~~~~L~~L~Ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~-----~ 442 (947)
...+|++|+|++|+|++.+|..|+++++|++|+|++|+|++..|..|..+++|++|||++|+|++.+|..+... .
T Consensus 492 ~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~ 571 (635)
T 4g8a_A 492 ELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAF 571 (635)
T ss_dssp TCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCE
T ss_pred hccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCE
Confidence 45689999999999999999999999999999999999998888899999999999999999999999765432 4
Q ss_pred eecCCCCCCCCCC
Q 002255 443 VKTDGNPDIGKDS 455 (947)
Q Consensus 443 ~~~~~n~~~~~~~ 455 (947)
+.+.+||+.|.+.
T Consensus 572 L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 572 LNLTQNDFACTCE 584 (635)
T ss_dssp EECTTCCBCCSGG
T ss_pred EEeeCCCCcccCC
Confidence 6789999999764
No 270
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=7.9e-33 Score=330.48 Aligned_cols=220 Identities=15% Similarity=0.138 Sum_probs=179.7
Q ss_pred cEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEecc
Q 002255 66 RVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLD 144 (947)
Q Consensus 66 ~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 144 (947)
+++.++++++.+....+..|..+++|++|+|++|.+++.+| .|.++++|++|+|++|.++++++..|+++++|++|+|+
T Consensus 52 ~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 131 (597)
T 3oja_B 52 NQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLE 131 (597)
T ss_dssp CCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEee
Confidence 56889999999886555568899999999999999999888 89999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCcccCcCCccccCCCCceeeeccCCCCC
Q 002255 145 YNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDS 224 (947)
Q Consensus 145 ~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~l~~n~~~~ 224 (947)
+|.|.. ..+..|+++++|++|+|++|.+++..|..|. .+++|++|+|++|.+++..+..+ .+|+.|++++|.+..
T Consensus 132 ~n~l~~-l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~--~l~~L~~L~L~~N~l~~~~~~~l--~~L~~L~l~~n~l~~ 206 (597)
T 3oja_B 132 RNDLSS-LPRGIFHNTPKLTTLSMSNNNLERIEDDTFQ--ATTSLQNLQLSSNRLTHVDLSLI--PSLFHANVSYNLLST 206 (597)
T ss_dssp SSCCCC-CCTTTTTTCTTCCEEECCSSCCCBCCTTTTT--TCTTCCEEECTTSCCSBCCGGGC--TTCSEEECCSSCCSE
T ss_pred CCCCCC-CCHHHhccCCCCCEEEeeCCcCCCCChhhhh--cCCcCcEEECcCCCCCCcChhhh--hhhhhhhcccCcccc
Confidence 999975 3445579999999999999999999898887 78999999999999997543332 568888888887654
Q ss_pred CCCCchhhhcCCCCCcEEEccCCcCcCCCCCCCCCCCCCEEEccCCccccCCCccccCCCCCCeEeccCCcccccCCC
Q 002255 225 KLNGSVAVIQNMTSLTQLWLHGNSFTGPLPDLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQTPK 302 (947)
Q Consensus 225 ~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~ 302 (947)
. ...++|+.|+|++|.++...+.+ .++|+.|+|++|.+++ +..+..+++|+.|+|++|.+++.+|.
T Consensus 207 l--------~~~~~L~~L~ls~n~l~~~~~~~--~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~ 272 (597)
T 3oja_B 207 L--------AIPIAVEELDASHNSINVVRGPV--NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYH 272 (597)
T ss_dssp E--------ECCTTCSEEECCSSCCCEEECSC--CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESG
T ss_pred c--------cCCchhheeeccCCccccccccc--CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHH
Confidence 2 33567777888888777655433 2567777777777775 36677777777777777777766554
No 271
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=6.8e-33 Score=332.88 Aligned_cols=344 Identities=17% Similarity=0.237 Sum_probs=269.6
Q ss_pred CcEEEEEecCCccccc-----------------Cccccc--CCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCc-
Q 002255 65 NRVTRIQIGGQNIEGT-----------------LPKELN--SLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNN- 123 (947)
Q Consensus 65 ~~v~~l~L~~~~l~g~-----------------~p~~l~--~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~- 123 (947)
.+++.|+|++|.++|. +|+.++ ++++|++|+|++|.+.+.+| .|.++++|++|+|++|+
T Consensus 206 ~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~ 285 (636)
T 4eco_A 206 TKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRG 285 (636)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTT
T ss_pred cCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCC
Confidence 5799999999999996 999999 99999999999999999998 79999999999999998
Q ss_pred CCC-CCcccccCC------CCCcEEeccCCCCCCCCCcc--cccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEc
Q 002255 124 FTS-VPSDFFKGL------TSLQTISLDYNSFDSWVIPE--SLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHL 194 (947)
Q Consensus 124 l~~-~~~~~~~~l------~~L~~L~Ls~N~l~~~~~p~--~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~L 194 (947)
+++ ..|..+..+ ++|++|+|++|++. .+|. .++++++|++|++++|+++|.+| .++ .+++|++|+|
T Consensus 286 l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~--~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~--~l~~L~~L~L 360 (636)
T 4eco_A 286 ISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK--TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFG--SEIKLASLNL 360 (636)
T ss_dssp SCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS--SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCE--EEEEESEEEC
T ss_pred CccccchHHHHhhhccccCCCCCEEECCCCcCC--ccCchhhhccCCCCCEEeCcCCcCccchh-hhC--CCCCCCEEEC
Confidence 998 666667666 99999999999997 5888 99999999999999999999999 776 7899999999
Q ss_pred cCCcccCcCCccccC-CC-CceeeeccCCCCCCCCCchhhhcCC--CCCcEEEccCCcCcCCCCC-CC-------CCCCC
Q 002255 195 AFNFLQGPIPLSFGK-SS-IQTLWLNGQKGDSKLNGSVAVIQNM--TSLTQLWLHGNSFTGPLPD-LS-------GLSSL 262 (947)
Q Consensus 195 s~N~l~~~~p~~~~~-~~-L~~L~l~~n~~~~~~~~~~~~~~~l--~~L~~L~L~~N~l~~~~~~-~~-------~l~~L 262 (947)
++|+++ .+|..+.. .+ |+.|++++|.+... .. .+..+ ++|+.|+|++|.+++.+|. +. .+.+|
T Consensus 361 ~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~~l-p~---~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L 435 (636)
T 4eco_A 361 AYNQIT-EIPANFCGFTEQVENLSFAHNKLKYI-PN---IFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINV 435 (636)
T ss_dssp CSSEEE-ECCTTSEEECTTCCEEECCSSCCSSC-CS---CCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCE
T ss_pred CCCccc-cccHhhhhhcccCcEEEccCCcCccc-ch---hhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCC
Confidence 999999 88888766 66 99999999998843 22 23343 4899999999999998874 66 77899
Q ss_pred CEEEccCCccccCCCcc-ccCCCCCCeEeccCCcccccCCCCC-CCcccccccCCCCcccCcCCCcCCCccceeeecccc
Q 002255 263 QDFSVRDNQLTGIVPSS-LVNLHSLAVVNLTNNLFQGQTPKFN-SPVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKS 340 (947)
Q Consensus 263 ~~L~l~~N~l~g~~p~~-l~~l~~L~~L~Ls~N~l~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (947)
++|+|++|+++ .+|.. +..+++|++|+|++|+++ .+|... ...........+...++...+.+. .++..
T Consensus 436 ~~L~Ls~N~l~-~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-------~lp~~ 506 (636)
T 4eco_A 436 SSINLSNNQIS-KFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-------KLSDD 506 (636)
T ss_dssp EEEECCSSCCC-SCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-------BCCGG
T ss_pred CEEECcCCccC-cCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-------ccChh
Confidence 99999999999 55555 556999999999999999 555432 211000001113333444443333 12222
Q ss_pred cC--ChhhhhccCCCCCCCCCCCCCcccCCCCceeEEEe------cCCCceeeccccccCCccCCeEeccCCcccccCCC
Q 002255 341 VG--YPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNL------KNLGLSGTISSNFSRLTSLRQLMLSGNELTGTIPK 412 (947)
Q Consensus 341 l~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~L~L------s~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~ 412 (947)
+. .+..+.......+.... +. .....+.+|+.|+| ++|.+.+.+|..++++++|+.|+|++|+| +.||.
T Consensus 507 ~~~~~l~~L~~L~Ls~N~l~~-ip-~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~ 583 (636)
T 4eco_A 507 FRATTLPYLVGIDLSYNSFSK-FP-TQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNE 583 (636)
T ss_dssp GSTTTCTTCCEEECCSSCCSS-CC-CGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCS
T ss_pred hhhccCCCcCEEECCCCCCCC-cC-hhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCH
Confidence 21 22223333333332222 11 12335788999999 56889999999999999999999999999 69999
Q ss_pred cCCCCCCCCccccccccccc
Q 002255 413 ELTTLPSLEMLDVSNNHLFG 432 (947)
Q Consensus 413 ~l~~l~~L~~L~ls~N~l~g 432 (947)
.+. ++|+.|||++|++..
T Consensus 584 ~~~--~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 584 KIT--PNISVLDIKDNPNIS 601 (636)
T ss_dssp CCC--TTCCEEECCSCTTCE
T ss_pred hHh--CcCCEEECcCCCCcc
Confidence 877 799999999997753
No 272
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=4.5e-32 Score=306.90 Aligned_cols=220 Identities=16% Similarity=0.163 Sum_probs=174.6
Q ss_pred CcEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEec
Q 002255 65 NRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISL 143 (947)
Q Consensus 65 ~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (947)
.+++.++++++.+...-+..+..+++|++|+|++|.+++..+ .|.++++|++|+|++|+++++++..|..+++|++|+|
T Consensus 45 ~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124 (390)
T ss_dssp CCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEEC
Confidence 467889999999885444457899999999999999998887 8999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCcc-cccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCcccCcCCccccCCCCceeeeccCCC
Q 002255 144 DYNSFDSWVIPE-SLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKG 222 (947)
Q Consensus 144 s~N~l~~~~~p~-~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~l~~n~~ 222 (947)
++|++.. +|. .+.++++|++|++++|.+++..|..+. .+++|++|+|++|++++.....+ .+|+.|++++|.+
T Consensus 125 ~~n~l~~--l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~--~l~~L~~L~l~~n~l~~~~~~~l--~~L~~L~l~~n~l 198 (390)
T 3o6n_A 125 ERNDLSS--LPRGIFHNTPKLTTLSMSNNNLERIEDDTFQ--ATTSLQNLQLSSNRLTHVDLSLI--PSLFHANVSYNLL 198 (390)
T ss_dssp CSSCCCC--CCTTTTTTCTTCCEEECCSSCCCBCCTTTTS--SCTTCCEEECCSSCCSBCCGGGC--TTCSEEECCSSCC
T ss_pred CCCccCc--CCHHHhcCCCCCcEEECCCCccCccChhhcc--CCCCCCEEECCCCcCCccccccc--cccceeecccccc
Confidence 9999975 554 468999999999999999988888887 68999999999999986532222 5688888888766
Q ss_pred CCCCCCchhhhcCCCCCcEEEccCCcCcCCCCCCCCCCCCCEEEccCCccccCCCccccCCCCCCeEeccCCcccccCCC
Q 002255 223 DSKLNGSVAVIQNMTSLTQLWLHGNSFTGPLPDLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQTPK 302 (947)
Q Consensus 223 ~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~ 302 (947)
... ...++|+.|++++|.++...... .++|+.|++++|++++. ..+.++++|++|+|++|.+++.+|.
T Consensus 199 ~~~--------~~~~~L~~L~l~~n~l~~~~~~~--~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~ 266 (390)
T 3o6n_A 199 STL--------AIPIAVEELDASHNSINVVRGPV--NVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYH 266 (390)
T ss_dssp SEE--------ECCSSCSEEECCSSCCCEEECCC--CSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESG
T ss_pred ccc--------CCCCcceEEECCCCeeeeccccc--cccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChh
Confidence 542 23456777777777776653322 35677777777777643 4567777777777777777665543
No 273
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.2e-32 Score=333.39 Aligned_cols=345 Identities=18% Similarity=0.207 Sum_probs=272.5
Q ss_pred CcEEEEEecCCcccc-----------------cCccccc--CCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCc-
Q 002255 65 NRVTRIQIGGQNIEG-----------------TLPKELN--SLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNN- 123 (947)
Q Consensus 65 ~~v~~l~L~~~~l~g-----------------~~p~~l~--~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~- 123 (947)
.+++.|+|++|.++| .+|+.++ ++++|++|+|++|.+.+.+| .|.++++|++|+|++|+
T Consensus 448 ~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~ 527 (876)
T 4ecn_A 448 TKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRG 527 (876)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTT
T ss_pred CCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCC
Confidence 579999999999999 4999988 99999999999999999998 79999999999999998
Q ss_pred CCC-CCcccccC-------CCCCcEEeccCCCCCCCCCcc--cccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEE
Q 002255 124 FTS-VPSDFFKG-------LTSLQTISLDYNSFDSWVIPE--SLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLH 193 (947)
Q Consensus 124 l~~-~~~~~~~~-------l~~L~~L~Ls~N~l~~~~~p~--~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~ 193 (947)
+++ ..|..+.. +++|++|+|++|++. .+|. .++++++|+.|+|++|+++ .+| .++ .+++|++|+
T Consensus 528 lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~--~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~--~L~~L~~L~ 601 (876)
T 4ecn_A 528 ISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE--EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFG--TNVKLTDLK 601 (876)
T ss_dssp SCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC--BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCC--TTSEESEEE
T ss_pred cccccchHHHHhhhhcccccCCccEEEeeCCcCC--ccCChhhhhcCCCCCEEECCCCCcc-cch-hhc--CCCcceEEE
Confidence 997 55554444 459999999999997 5888 9999999999999999999 888 776 799999999
Q ss_pred ccCCcccCcCCccccC-CC-CceeeeccCCCCCCCCCchhhhcCCC--CCcEEEccCCcCcCCCCCCC------CCCCCC
Q 002255 194 LAFNFLQGPIPLSFGK-SS-IQTLWLNGQKGDSKLNGSVAVIQNMT--SLTQLWLHGNSFTGPLPDLS------GLSSLQ 263 (947)
Q Consensus 194 Ls~N~l~~~~p~~~~~-~~-L~~L~l~~n~~~~~~~~~~~~~~~l~--~L~~L~L~~N~l~~~~~~~~------~l~~L~ 263 (947)
|++|+++ .+|..+.. .+ |+.|+|++|.+... + ..+..++ +|+.|+|++|++++.+|.+. .+.+|+
T Consensus 602 Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~~l-p---~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~ 676 (876)
T 4ecn_A 602 LDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLKYI-P---NIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINAS 676 (876)
T ss_dssp CCSSCCS-CCCTTSCEECTTCCEEECCSSCCCSC-C---SCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEE
T ss_pred CcCCccc-cchHHHhhccccCCEEECcCCCCCcC-c---hhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcC
Confidence 9999999 88888766 56 99999999998843 2 2344444 49999999999999887644 456899
Q ss_pred EEEccCCccccCCCcccc-CCCCCCeEeccCCcccccCCCCCCC-cccccccCCCCcccCcCCCcCCCccceeeeccccc
Q 002255 264 DFSVRDNQLTGIVPSSLV-NLHSLAVVNLTNNLFQGQTPKFNSP-VRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSV 341 (947)
Q Consensus 264 ~L~l~~N~l~g~~p~~l~-~l~~L~~L~Ls~N~l~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 341 (947)
.|+|++|+|+ .+|..+. .+++|+.|+|++|+++ .+|..... ....+....++..++...+.+. .++
T Consensus 677 ~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-------~lp--- 744 (876)
T 4ecn_A 677 TVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-------SLS--- 744 (876)
T ss_dssp EEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-------CCC---
T ss_pred EEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-------cch---
Confidence 9999999999 6777654 8999999999999999 55543211 1000000012222222222111 000
Q ss_pred CChhhhhccCCCCCCCCCCCCCcccCCCCceeEEEecCCCceeeccccccCCccCCeEeccC------CcccccCCCcCC
Q 002255 342 GYPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLSGTISSNFSRLTSLRQLMLSG------NELTGTIPKELT 415 (947)
Q Consensus 342 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g~ip~~~~~l~~L~~L~Ls~------N~l~g~iP~~l~ 415 (947)
..+....+++|+.|+|++|.+++ +|..++++++|+.|+|++ |++.+.+|..|.
T Consensus 745 --------------------~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~ 803 (876)
T 4ecn_A 745 --------------------DDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGIT 803 (876)
T ss_dssp --------------------GGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGG
T ss_pred --------------------HHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHh
Confidence 00111245789999999999998 899999999999999976 889999999999
Q ss_pred CCCCCCccccccccccccCCCCccc--eeeecCCCCCCCCC
Q 002255 416 TLPSLEMLDVSNNHLFGKVPNFRQN--VIVKTDGNPDIGKD 454 (947)
Q Consensus 416 ~l~~L~~L~ls~N~l~g~iP~~~~~--~~~~~~~n~~~~~~ 454 (947)
.+++|+.|+|++|+| +.||..... ..+.+.+|+...-.
T Consensus 804 ~L~~L~~L~Ls~N~L-~~Ip~~l~~~L~~LdLs~N~l~~i~ 843 (876)
T 4ecn_A 804 TCPSLIQLQIGSNDI-RKVDEKLTPQLYILDIADNPNISID 843 (876)
T ss_dssp GCSSCCEEECCSSCC-CBCCSCCCSSSCEEECCSCTTCEEE
T ss_pred cCCCCCEEECCCCCC-CccCHhhcCCCCEEECCCCCCCccC
Confidence 999999999999999 899975432 24567788765433
No 274
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=2.8e-33 Score=307.88 Aligned_cols=272 Identities=16% Similarity=0.256 Sum_probs=158.1
Q ss_pred CChHHHHHHHHHHHHcC-CCCCC--CCC-----CCCCCCCceeEeCC---------CCcEEEEEecCCcccccCcccccC
Q 002255 25 QSSSDAAAMQALKTSLG-NPASL--GWT-----DPDPCKWKHIQCSP---------SNRVTRIQIGGQNIEGTLPKELNS 87 (947)
Q Consensus 25 ~~~~~~~~l~~~k~~~~-~~~~~--~w~-----~~d~C~w~gv~C~~---------~~~v~~l~L~~~~l~g~~p~~l~~ 87 (947)
+...|++||++||+++. ++..| +|. ..++|.|.|+.|.. ..+|+.|+|++|++. .+|+.+++
T Consensus 24 ~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~~ 102 (328)
T 4fcg_A 24 ALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAFR 102 (328)
T ss_dssp CCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGGG
T ss_pred cCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhhhh
Confidence 33579999999999984 44343 573 46899999999952 356777777777766 66666666
Q ss_pred CCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCCcccccCCCCCCeE
Q 002255 88 LSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRF 166 (947)
Q Consensus 88 l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L 166 (947)
+++|++|+|++|.++ .+| .+.++++|++|+|++|+++.++ ..+..+++|++|+|++|++.+ .+|..+...
T Consensus 103 l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~~lp-~~l~~l~~L~~L~L~~n~~~~-~~p~~~~~~------ 173 (328)
T 4fcg_A 103 LSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLRALP-ASIASLNRLRELSIRACPELT-ELPEPLAST------ 173 (328)
T ss_dssp GTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCCCCC-GGGGGCTTCCEEEEEEETTCC-CCCSCSEEE------
T ss_pred CCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccccCc-HHHhcCcCCCEEECCCCCCcc-ccChhHhhc------
Confidence 677777777766666 333 4555555555555555555332 234445555555555544432 233222110
Q ss_pred eccCceeeeccCcccCCCCCCCccEEEccCCcccCcCCccccCCCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccC
Q 002255 167 SANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHG 246 (947)
Q Consensus 167 ~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~ 246 (947)
.++..+. .+++|++|+|++|+++ .+|.
T Consensus 174 ---------~~~~~~~--~l~~L~~L~L~~n~l~-~lp~----------------------------------------- 200 (328)
T 4fcg_A 174 ---------DASGEHQ--GLVNLQSLRLEWTGIR-SLPA----------------------------------------- 200 (328)
T ss_dssp ---------C-CCCEE--ESTTCCEEEEEEECCC-CCCG-----------------------------------------
T ss_pred ---------cchhhhc--cCCCCCEEECcCCCcC-cchH-----------------------------------------
Confidence 0001111 2444444444444444 3333
Q ss_pred CcCcCCCCCCCCCCCCCEEEccCCccccCCCccccCCCCCCeEeccCCcccccCCCCCCCcccccccCCCCcccCcCCCc
Q 002255 247 NSFTGPLPDLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQTPKFNSPVRFDMAKGSNSFCLDDAGVA 326 (947)
Q Consensus 247 N~l~~~~~~~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (947)
.+..+++|++|+|++|++++ +|..+..+++|++|+|++|++.+.+|..+.
T Consensus 201 --------~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~--------------------- 250 (328)
T 4fcg_A 201 --------SIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFG--------------------- 250 (328)
T ss_dssp --------GGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTT---------------------
T ss_pred --------hhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhc---------------------
Confidence 34444444444444444442 344444555555555555555444443211
Q ss_pred CCCccceeeecccccCChhhhhccCCCCCCCCCCCCCcccCCCCceeEEEecCCCceeeccccccCCccCCeEeccCCcc
Q 002255 327 CDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLSGTISSNFSRLTSLRQLMLSGNEL 406 (947)
Q Consensus 327 ~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l 406 (947)
.+.+|+.|+|++|.+.+.+|..++++++|+.|+|++|++
T Consensus 251 -----------------------------------------~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~ 289 (328)
T 4fcg_A 251 -----------------------------------------GRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVN 289 (328)
T ss_dssp -----------------------------------------CCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTT
T ss_pred -----------------------------------------CCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCc
Confidence 112455555555555556677778888888888888888
Q ss_pred cccCCCcCCCCCCCCccccccccc
Q 002255 407 TGTIPKELTTLPSLEMLDVSNNHL 430 (947)
Q Consensus 407 ~g~iP~~l~~l~~L~~L~ls~N~l 430 (947)
.|.+|.+++.+++|+.++++.|.+
T Consensus 290 ~~~iP~~l~~L~~L~~l~l~~~~~ 313 (328)
T 4fcg_A 290 LSRLPSLIAQLPANCIILVPPHLQ 313 (328)
T ss_dssp CCCCCGGGGGSCTTCEEECCGGGS
T ss_pred hhhccHHHhhccCceEEeCCHHHH
Confidence 888888888888888888887665
No 275
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.98 E-value=7e-32 Score=321.75 Aligned_cols=334 Identities=19% Similarity=0.181 Sum_probs=255.9
Q ss_pred CcEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEec
Q 002255 65 NRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISL 143 (947)
Q Consensus 65 ~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (947)
.+++.|+|++|++++..+..|.++++|++|+|++|++++.+| .|.++++|++|++++|+++++++..|+++++|++|+|
T Consensus 52 ~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 131 (570)
T 2z63_A 52 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 131 (570)
T ss_dssp SSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEEC
T ss_pred CCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCCCccccccccccEEec
Confidence 478999999999998778889999999999999999988877 7899999999999999999988877899999999999
Q ss_pred cCCCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCC----------------------------------------
Q 002255 144 DYNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGG---------------------------------------- 183 (947)
Q Consensus 144 s~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~---------------------------------------- 183 (947)
++|.+....+|..++++++|++|++++|.+++..|..+..
T Consensus 132 ~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~ 211 (570)
T 2z63_A 132 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNF 211 (570)
T ss_dssp CSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCC
T ss_pred CCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCCceecCHHHhccCcceeEeccccc
Confidence 9999876557889999999999999988876654432210
Q ss_pred -------------------------------------------------------------------CCCCCccEEEccC
Q 002255 184 -------------------------------------------------------------------DTIPGLMHLHLAF 196 (947)
Q Consensus 184 -------------------------------------------------------------------~~l~~L~~L~Ls~ 196 (947)
..+++|++|++++
T Consensus 212 ~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~ 291 (570)
T 2z63_A 212 DSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVS 291 (570)
T ss_dssp SCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEES
T ss_pred ccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEecC
Confidence 0134555666666
Q ss_pred CcccCcCCccccC-------------------------------------------CCCceeeeccCCCCCCCCCchhhh
Q 002255 197 NFLQGPIPLSFGK-------------------------------------------SSIQTLWLNGQKGDSKLNGSVAVI 233 (947)
Q Consensus 197 N~l~~~~p~~~~~-------------------------------------------~~L~~L~l~~n~~~~~~~~~~~~~ 233 (947)
|.++ .+|..+.. .+|+.|++++|.+.... .....+
T Consensus 292 ~~l~-~l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~~~~L~~L~l~~n~l~~~~-~~~~~~ 369 (570)
T 2z63_A 292 VTIE-RVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKG-CCSQSD 369 (570)
T ss_dssp CEEC-SCCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCBCTTCCEEECCSSCCBEEE-EEEHHH
T ss_pred ccch-hhhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCccccccccccCCCCCEEeCcCCccCccc-cccccc
Confidence 6555 34433321 23444444444433211 013457
Q ss_pred cCCCCCcEEEccCCcCcCCCCCCCCCCCCCEEEccCCccccCCC-ccccCCCCCCeEeccCCcccccCCCCCCCcccccc
Q 002255 234 QNMTSLTQLWLHGNSFTGPLPDLSGLSSLQDFSVRDNQLTGIVP-SSLVNLHSLAVVNLTNNLFQGQTPKFNSPVRFDMA 312 (947)
Q Consensus 234 ~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~g~~p-~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~ 312 (947)
.++++|+.|+|++|.+++.++.+..+++|++|++++|++++..| ..+.++++|++|+|++|.+++.+|..+....
T Consensus 370 ~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~---- 445 (570)
T 2z63_A 370 FGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLS---- 445 (570)
T ss_dssp HTCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCT----
T ss_pred cccCccCEEECCCCccccccccccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCC----
Confidence 78999999999999999887778889999999999999998766 5788999999999999999998886543322
Q ss_pred cCCCCcccCcCCCcCCCccceeeecccccCChhhhhccCCCCCCCCCCCCCcccCCCCceeEEEecCCCceeeccccccC
Q 002255 313 KGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLSGTISSNFSR 392 (947)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g~ip~~~~~ 392 (947)
+...++...+.+... ..+ ..+..+++|+.|+|++|++++..|..|++
T Consensus 446 ---~L~~L~l~~n~l~~~-----~~p-------------------------~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 492 (570)
T 2z63_A 446 ---SLEVLKMAGNSFQEN-----FLP-------------------------DIFTELRNLTFLDLSQCQLEQLSPTAFNS 492 (570)
T ss_dssp ---TCCEEECTTCEEGGG-----EEC-------------------------SCCTTCTTCCEEECTTSCCCEECTTTTTT
T ss_pred ---cCcEEECcCCcCccc-----cch-------------------------hhhhcccCCCEEECCCCccccCChhhhhc
Confidence 222222222211100 000 11234568999999999999999999999
Q ss_pred CccCCeEeccCCcccccCCCcCCCCCCCCccccccccccccCCCC
Q 002255 393 LTSLRQLMLSGNELTGTIPKELTTLPSLEMLDVSNNHLFGKVPNF 437 (947)
Q Consensus 393 l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ls~N~l~g~iP~~ 437 (947)
+++|+.|+|++|++++..|..+..+++|+.|++++|+++|.+|..
T Consensus 493 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~ 537 (570)
T 2z63_A 493 LSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 537 (570)
T ss_dssp CTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred ccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcch
Confidence 999999999999999888888999999999999999999999964
No 276
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.98 E-value=3.8e-31 Score=322.18 Aligned_cols=225 Identities=22% Similarity=0.238 Sum_probs=169.2
Q ss_pred CcEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEec
Q 002255 65 NRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISL 143 (947)
Q Consensus 65 ~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (947)
.+++.|+|++|.+++..|..|+++++|++|+|++|.+++.++ .|.++++|++|+|++|+++++++..|.++++|++|+|
T Consensus 49 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 128 (680)
T 1ziw_A 49 SQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDL 128 (680)
T ss_dssp TTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEEC
T ss_pred CcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEEC
Confidence 478999999999998888899999999999999999998777 6999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCcccCcCCccccC--------------
Q 002255 144 DYNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGK-------------- 209 (947)
Q Consensus 144 s~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-------------- 209 (947)
++|.+.+ ..|..++++++|++|++++|.+++..+..+....+++|++|+|++|++++..|..+..
T Consensus 129 s~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l 207 (680)
T 1ziw_A 129 SHNGLSS-TKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQL 207 (680)
T ss_dssp CSSCCSC-CCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCC
T ss_pred CCCcccc-cCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhcccccc
Confidence 9999976 6778889999999999999999887777654224578899999999888777765532
Q ss_pred --------------CCCceeeeccCCCCCCCCCchhhhcCC--CCCcEEEccCCcCcCCCCC-CCCCCCCCEEEccCCcc
Q 002255 210 --------------SSIQTLWLNGQKGDSKLNGSVAVIQNM--TSLTQLWLHGNSFTGPLPD-LSGLSSLQDFSVRDNQL 272 (947)
Q Consensus 210 --------------~~L~~L~l~~n~~~~~~~~~~~~~~~l--~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~l~~N~l 272 (947)
.+|+.|++++|.+....... +.++ ++|+.|+|++|++++.++. +..+++|++|++++|++
T Consensus 208 ~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~---~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l 284 (680)
T 1ziw_A 208 GPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTT---FLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNI 284 (680)
T ss_dssp HHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTT---TGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCB
T ss_pred ChhhHHHHHHHhhhccccEEEccCCcccccChhH---hhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCcc
Confidence 34566666666655443332 2233 2366666666666665553 56666666666666666
Q ss_pred ccCCCccccCCCCCCeEeccC
Q 002255 273 TGIVPSSLVNLHSLAVVNLTN 293 (947)
Q Consensus 273 ~g~~p~~l~~l~~L~~L~Ls~ 293 (947)
++..|..+..+++|+.|+|++
T Consensus 285 ~~~~~~~~~~l~~L~~L~L~~ 305 (680)
T 1ziw_A 285 QHLFSHSLHGLFNVRYLNLKR 305 (680)
T ss_dssp SEECTTTTTTCTTCCEEECTT
T ss_pred CccChhhhcCCCCccEEeccc
Confidence 655555444444444444433
No 277
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.97 E-value=2.8e-32 Score=298.15 Aligned_cols=250 Identities=26% Similarity=0.421 Sum_probs=183.5
Q ss_pred CcEEecCCCcCCC--CCcccccCCCCCcEEeccC-CCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCcc
Q 002255 114 LQEVLFDDNNFTS--VPSDFFKGLTSLQTISLDY-NSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLM 190 (947)
Q Consensus 114 L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~Ls~-N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~ 190 (947)
+++|+|++|.+++ ..|..|.++++|++|+|++ |.+.+ .+|..++++++|++|+|++|++++.+|..+. .+++|+
T Consensus 52 l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~-~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~--~l~~L~ 128 (313)
T 1ogq_A 52 VNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVG-PIPPAIAKLTQLHYLYITHTNVSGAIPDFLS--QIKTLV 128 (313)
T ss_dssp EEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEES-CCCGGGGGCTTCSEEEEEEECCEEECCGGGG--GCTTCC
T ss_pred EEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccc-cCChhHhcCCCCCEEECcCCeeCCcCCHHHh--CCCCCC
Confidence 3344444444443 3333444555555555552 54443 4555555555555555556666666666665 566677
Q ss_pred EEEccCCcccCcCCccccCCCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccCCcCcCCCC-CCCCCC-CCCEEEcc
Q 002255 191 HLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPLP-DLSGLS-SLQDFSVR 268 (947)
Q Consensus 191 ~L~Ls~N~l~~~~p~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~-~L~~L~l~ 268 (947)
+|+|++|++++.+|..+. ++++|++|+|++|++++.+| .+..++ +|++|+++
T Consensus 129 ~L~Ls~N~l~~~~p~~~~--------------------------~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~ 182 (313)
T 1ogq_A 129 TLDFSYNALSGTLPPSIS--------------------------SLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTIS 182 (313)
T ss_dssp EEECCSSEEESCCCGGGG--------------------------GCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECC
T ss_pred EEeCCCCccCCcCChHHh--------------------------cCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECc
Confidence 777777776666665543 36777777777777776655 366666 89999999
Q ss_pred CCccccCCCccccCCCCCCeEeccCCcccccCCCCCCCcccccccCCCCcccCcCCCcCCCccceeeecccccCChhhhh
Q 002255 269 DNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQTPKFNSPVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVLA 348 (947)
Q Consensus 269 ~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~ 348 (947)
+|++++.+|..+..++ |+.|+|++|++++.+|..+
T Consensus 183 ~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~-------------------------------------------- 217 (313)
T 1ogq_A 183 RNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLF-------------------------------------------- 217 (313)
T ss_dssp SSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGC--------------------------------------------
T ss_pred CCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHH--------------------------------------------
Confidence 9999999999999998 9999999999998776532
Q ss_pred ccCCCCCCCCCCCCCcccCCCCceeEEEecCCCceeeccccccCCccCCeEeccCCcccccCCCcCCCCCCCCccccccc
Q 002255 349 ESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLSGTISSNFSRLTSLRQLMLSGNELTGTIPKELTTLPSLEMLDVSNN 428 (947)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ls~N 428 (947)
...++|+.|+|++|.+++.+|. +..+++|++|+|++|+|+|.+|..+..+++|++|+|++|
T Consensus 218 ------------------~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 278 (313)
T 1ogq_A 218 ------------------GSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFN 278 (313)
T ss_dssp ------------------CTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSS
T ss_pred ------------------hcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCC
Confidence 2234799999999999988877 899999999999999999999999999999999999999
Q ss_pred cccccCCCCccc---eeeecCCCCCCCCCCC
Q 002255 429 HLFGKVPNFRQN---VIVKTDGNPDIGKDSS 456 (947)
Q Consensus 429 ~l~g~iP~~~~~---~~~~~~~n~~~~~~~~ 456 (947)
+|+|.+|...+. ..+.+.+|+++|+.|.
T Consensus 279 ~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p~ 309 (313)
T 1ogq_A 279 NLCGEIPQGGNLQRFDVSAYANNKCLCGSPL 309 (313)
T ss_dssp EEEEECCCSTTGGGSCGGGTCSSSEEESTTS
T ss_pred cccccCCCCccccccChHHhcCCCCccCCCC
Confidence 999999986322 2456889999998643
No 278
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.97 E-value=5.3e-31 Score=316.47 Aligned_cols=159 Identities=20% Similarity=0.265 Sum_probs=141.9
Q ss_pred EEEecCCcccccCcccccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEeccCCC
Q 002255 69 RIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNS 147 (947)
Q Consensus 69 ~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 147 (947)
.+++++++++ .+|..+. ++|++|+|++|++++.++ .|.++++|++|+|++|+++++++..|.++++|++|+|++|+
T Consensus 15 ~~~c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~ 91 (606)
T 3vq2_A 15 TYQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNP 91 (606)
T ss_dssp EEECTTSCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred ceEccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCc
Confidence 5788888888 7887765 899999999999999888 89999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCcccC-cCCccccC-CCCceeeeccCCCCCC
Q 002255 148 FDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQG-PIPLSFGK-SSIQTLWLNGQKGDSK 225 (947)
Q Consensus 148 l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~-~~L~~L~l~~n~~~~~ 225 (947)
+.+ ..|..|+++++|++|++++|.+++..+..++ .+++|++|+|++|++++ .+|..++. .+|+.|++++|.+...
T Consensus 92 l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~--~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~ 168 (606)
T 3vq2_A 92 IQS-FSPGSFSGLTSLENLVAVETKLASLESFPIG--QLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTI 168 (606)
T ss_dssp CCC-CCTTSSTTCTTCCEEECTTSCCCCSSSSCCT--TCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEE
T ss_pred ccc-cChhhcCCcccCCEEEccCCccccccccccC--CCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceec
Confidence 976 6689999999999999999999988878887 79999999999999986 67888876 7899999999998876
Q ss_pred CCCchhhh
Q 002255 226 LNGSVAVI 233 (947)
Q Consensus 226 ~~~~~~~~ 233 (947)
....+..+
T Consensus 169 ~~~~~~~l 176 (606)
T 3vq2_A 169 TVNDLQFL 176 (606)
T ss_dssp CTTTTHHH
T ss_pred Chhhhhhh
Confidence 55544333
No 279
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.97 E-value=2.3e-30 Score=297.43 Aligned_cols=337 Identities=16% Similarity=0.119 Sum_probs=237.4
Q ss_pred CcEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCCCCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEecc
Q 002255 65 NRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLD 144 (947)
Q Consensus 65 ~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 144 (947)
.+++.|+|++|++++. | .++.+++|++|+|++|++++. | +..+++|++|+|++|++++++ ++.+++|++|+|+
T Consensus 42 ~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~-~~~l~~L~~L~Ls~N~l~~~~---~~~l~~L~~L~L~ 114 (457)
T 3bz5_A 42 ATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D-LSQNTNLTYLACDSNKLTNLD---VTPLTKLTYLNCD 114 (457)
T ss_dssp TTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C-CTTCTTCSEEECCSSCCSCCC---CTTCTTCCEEECC
T ss_pred CCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c-cccCCCCCEEECcCCCCceee---cCCCCcCCEEECC
Confidence 4789999999999964 5 799999999999999999985 4 899999999999999999984 8899999999999
Q ss_pred CCCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCcccCcCCccccCCCCceeeeccCCCCC
Q 002255 145 YNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDS 224 (947)
Q Consensus 145 ~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~l~~n~~~~ 224 (947)
+|++.+ +| ++.+++|++|++++|++++. + ++ .+++|++|++++|+..+.++ .....+|+.|++++|++..
T Consensus 115 ~N~l~~--l~--~~~l~~L~~L~l~~N~l~~l-~--l~--~l~~L~~L~l~~n~~~~~~~-~~~l~~L~~L~ls~n~l~~ 184 (457)
T 3bz5_A 115 TNKLTK--LD--VSQNPLLTYLNCARNTLTEI-D--VS--HNTQLTELDCHLNKKITKLD-VTPQTQLTTLDCSFNKITE 184 (457)
T ss_dssp SSCCSC--CC--CTTCTTCCEEECTTSCCSCC-C--CT--TCTTCCEEECTTCSCCCCCC-CTTCTTCCEEECCSSCCCC
T ss_pred CCcCCe--ec--CCCCCcCCEEECCCCcccee-c--cc--cCCcCCEEECCCCCcccccc-cccCCcCCEEECCCCccce
Confidence 999976 44 89999999999999999974 3 54 68999999999997776663 2233789999999999887
Q ss_pred CCCCchhhhcCCCCCcEEEccCCcCcCCCCCCCCCCCCCEEEccCCccccCCCccccCCCCCCeEeccCCcccccCCCCC
Q 002255 225 KLNGSVAVIQNMTSLTQLWLHGNSFTGPLPDLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQTPKFN 304 (947)
Q Consensus 225 ~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~ 304 (947)
.. +..+++|+.|+|++|++++. ++..+++|++|++++|++++ +| +..+++|+.|++++|++++..+..+
T Consensus 185 l~------l~~l~~L~~L~l~~N~l~~~--~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l 253 (457)
T 3bz5_A 185 LD------VSQNKLLNRLNCDTNNITKL--DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTL 253 (457)
T ss_dssp CC------CTTCTTCCEEECCSSCCSCC--CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTC
T ss_pred ec------cccCCCCCEEECcCCcCCee--ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHC
Confidence 42 56789999999999999986 58889999999999999997 66 8899999999999999998766544
Q ss_pred CCcccccccCCCCcccCcCCCcCCCccceeeecccccCChhhhhccCCCCCCCC-CCCCCcccCCCCceeEEEecCCCce
Q 002255 305 SPVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCN-SDWKGVSCDAGGNITVVNLKNLGLS 383 (947)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~L~~L~Ls~n~l~ 383 (947)
..+..-.....+...++...+...+.++ ......+..+..-.....+..++. ..+..+.....++|+.|+|++|+++
T Consensus 254 ~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~ 331 (457)
T 3bz5_A 254 SKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELT 331 (457)
T ss_dssp TTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCS
T ss_pred CCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCccc
Confidence 4333111111122223333222222111 011111111111000001111110 1122233445567788888888887
Q ss_pred eeccccccCCccCCeEeccCCcccccCCCcCCC-------------CCCCCccccccccccccCCC
Q 002255 384 GTISSNFSRLTSLRQLMLSGNELTGTIPKELTT-------------LPSLEMLDVSNNHLFGKVPN 436 (947)
Q Consensus 384 g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~-------------l~~L~~L~ls~N~l~g~iP~ 436 (947)
| ++ ++++++|+.|+|++|+|+| +| .+.. +..|..+++++|+|+|.||.
T Consensus 332 ~-l~--l~~l~~L~~L~l~~N~l~~-l~-~L~~L~l~~n~l~g~~~~~~l~~l~l~~N~l~g~ip~ 392 (457)
T 3bz5_A 332 E-LD--VSHNTKLKSLSCVNAHIQD-FS-SVGKIPALNNNFEAEGQTITMPKETLTNNSLTIAVSP 392 (457)
T ss_dssp C-CC--CTTCTTCSEEECCSSCCCB-CT-TGGGSSGGGTSEEEEEEEEECCCBCCBTTBEEEECCT
T ss_pred c-cc--cccCCcCcEEECCCCCCCC-cc-ccccccccCCcEEecceeeecCccccccCcEEEEcCh
Confidence 7 33 7778888888888888875 32 1111 12345556666666666664
No 280
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.97 E-value=3.1e-31 Score=316.62 Aligned_cols=287 Identities=20% Similarity=0.254 Sum_probs=252.6
Q ss_pred CcEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEec
Q 002255 65 NRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISL 143 (947)
Q Consensus 65 ~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (947)
.+++.|+|++|.+++..|..|+.+++|++|+|++|.+++.+| .|.++++|++|+|++|.++++++..|.++++|++|+|
T Consensus 75 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 154 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 154 (597)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEe
Confidence 368999999999998888899999999999999999999888 6899999999999999999999999999999999999
Q ss_pred cCCCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCcccCcCCccccCCCCceeeeccCCCC
Q 002255 144 DYNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGD 223 (947)
Q Consensus 144 s~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~l~~n~~~ 223 (947)
++|.+.+ ..|..++++++|++|+|++|.+++..+ . .+++|++|++++|.+++... ..+|+.|++++|.+.
T Consensus 155 s~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~---~--~l~~L~~L~l~~n~l~~l~~----~~~L~~L~ls~n~l~ 224 (597)
T 3oja_B 155 SNNNLER-IEDDTFQATTSLQNLQLSSNRLTHVDL---S--LIPSLFHANVSYNLLSTLAI----PIAVEELDASHNSIN 224 (597)
T ss_dssp CSSCCCB-CCTTTTTTCTTCCEEECTTSCCSBCCG---G--GCTTCSEEECCSSCCSEEEC----CTTCSEEECCSSCCC
T ss_pred eCCcCCC-CChhhhhcCCcCcEEECcCCCCCCcCh---h--hhhhhhhhhcccCccccccC----CchhheeeccCCccc
Confidence 9999976 677889999999999999999997532 2 57899999999999986321 246999999999987
Q ss_pred CCCCCchhhhcCCCCCcEEEccCCcCcCCCCCCCCCCCCCEEEccCCccccCCCccccCCCCCCeEeccCCcccccCCCC
Q 002255 224 SKLNGSVAVIQNMTSLTQLWLHGNSFTGPLPDLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQTPKF 303 (947)
Q Consensus 224 ~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~ 303 (947)
...... .++|+.|+|++|.+++. +.+..+++|+.|+|++|.+++.+|..|..+++|+.|+|++|.+++..+.
T Consensus 225 ~~~~~~------~~~L~~L~L~~n~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~- 296 (597)
T 3oja_B 225 VVRGPV------NVELTILKLQHNNLTDT-AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLY- 296 (597)
T ss_dssp EEECSC------CSCCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCEEECS-
T ss_pred cccccc------CCCCCEEECCCCCCCCC-hhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCCCCcc-
Confidence 654432 46899999999999974 6688899999999999999999999999999999999999999874221
Q ss_pred CCCcccccccCCCCcccCcCCCcCCCccceeeecccccCChhhhhccCCCCCCCCCCCCCcccCCCCceeEEEecCCCce
Q 002255 304 NSPVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLS 383 (947)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~ 383 (947)
...+++|+.|+|++|.++
T Consensus 297 --------------------------------------------------------------~~~l~~L~~L~Ls~N~l~ 314 (597)
T 3oja_B 297 --------------------------------------------------------------GQPIPTLKVLDLSHNHLL 314 (597)
T ss_dssp --------------------------------------------------------------SSCCTTCCEEECCSSCCC
T ss_pred --------------------------------------------------------------cccCCCCcEEECCCCCCC
Confidence 012347999999999999
Q ss_pred eeccccccCCccCCeEeccCCcccccCCCcCCCCCCCCccccccccccccCC
Q 002255 384 GTISSNFSRLTSLRQLMLSGNELTGTIPKELTTLPSLEMLDVSNNHLFGKVP 435 (947)
Q Consensus 384 g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ls~N~l~g~iP 435 (947)
.+|..++.+++|+.|+|++|+|+ .+| +..+++|+.|+|++|+|+|..+
T Consensus 315 -~i~~~~~~l~~L~~L~L~~N~l~-~~~--~~~~~~L~~L~l~~N~~~~~~~ 362 (597)
T 3oja_B 315 -HVERNQPQFDRLENLYLDHNSIV-TLK--LSTHHTLKNLTLSHNDWDCNSL 362 (597)
T ss_dssp -CCGGGHHHHTTCSEEECCSSCCC-CCC--CCTTCCCSEEECCSSCEEHHHH
T ss_pred -ccCcccccCCCCCEEECCCCCCC-CcC--hhhcCCCCEEEeeCCCCCChhH
Confidence 68889999999999999999999 454 7788999999999999998754
No 281
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.97 E-value=8.9e-32 Score=316.83 Aligned_cols=144 Identities=17% Similarity=0.229 Sum_probs=128.3
Q ss_pred EEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEeccCC
Q 002255 68 TRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYN 146 (947)
Q Consensus 68 ~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N 146 (947)
+.|++++|+++ .+|..+. ++|++|+|++|.+++.+| .|.++++|++|+|++|++++++|..|.++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 46899999999 7888777 899999999999999887 7999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCCCCCeEeccCceeee-ccCcccCCCCCCCccEEEccCCcccCcCCccccCCCC--ceeeeccCCC
Q 002255 147 SFDSWVIPESLKDATGLQRFSANGANITG-TIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSI--QTLWLNGQKG 222 (947)
Q Consensus 147 ~l~~~~~p~~~~~l~~L~~L~l~~n~l~~-~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L--~~L~l~~n~~ 222 (947)
++.. +|.. .+++|++|+|++|.+++ .+|..++ .+++|++|+|++|++++.....+ .+| +.|++++|.+
T Consensus 80 ~l~~--lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~--~l~~L~~L~L~~n~l~~~~~~~l--~~L~L~~L~l~~n~l 150 (520)
T 2z7x_B 80 KLVK--ISCH--PTVNLKHLDLSFNAFDALPICKEFG--NMSQLKFLGLSTTHLEKSSVLPI--AHLNISKVLLVLGET 150 (520)
T ss_dssp CCCE--EECC--CCCCCSEEECCSSCCSSCCCCGGGG--GCTTCCEEEEEESSCCGGGGGGG--TTSCEEEEEEEECTT
T ss_pred ceee--cCcc--ccCCccEEeccCCccccccchhhhc--cCCcceEEEecCcccchhhcccc--ccceeeEEEeecccc
Confidence 9974 6766 89999999999999997 5788888 79999999999999987332222 456 9999999988
No 282
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.97 E-value=9.2e-31 Score=310.86 Aligned_cols=317 Identities=19% Similarity=0.194 Sum_probs=229.2
Q ss_pred CcEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCCCCCCCCCCcEEecCCCcCCCCC-cccccCCCCCcEEec
Q 002255 65 NRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVP-SDFFKGLTSLQTISL 143 (947)
Q Consensus 65 ~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L~L 143 (947)
.+++.|+|++|.+++..|..|.++++|++|+|++|+++. +|.. .+++|++|+|++|++++++ |..|+++++|++|+|
T Consensus 76 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~-~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L 153 (562)
T 3a79_B 76 SELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQN-ISCC-PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGL 153 (562)
T ss_dssp TTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCCE-ECSC-CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEE
T ss_pred CCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCCc-cCcc-ccccCCEEECCCCCccccCchHhhcccCcccEEec
Confidence 579999999999999889999999999999999999995 5533 8999999999999999976 578999999999999
Q ss_pred cCCCCCCCCCcccccCCCCC--CeEeccCcee--eeccCcccCCCC------------------------C---------
Q 002255 144 DYNSFDSWVIPESLKDATGL--QRFSANGANI--TGTIPDFLGGDT------------------------I--------- 186 (947)
Q Consensus 144 s~N~l~~~~~p~~~~~l~~L--~~L~l~~n~l--~~~~p~~~~~~~------------------------l--------- 186 (947)
++|++.. ..+..+++| ++|++++|.+ ++..|..+.... +
T Consensus 154 ~~n~l~~----~~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~ 229 (562)
T 3a79_B 154 SAAKFRQ----LDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIK 229 (562)
T ss_dssp ECSBCCT----TTTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEE
T ss_pred CCCcccc----CchhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEeccc
Confidence 9999965 234444555 9999999988 666666554211 1
Q ss_pred ----------------------------------------------CCccEEEccCCcccCcCCcccc------------
Q 002255 187 ----------------------------------------------PGLMHLHLAFNFLQGPIPLSFG------------ 208 (947)
Q Consensus 187 ----------------------------------------------~~L~~L~Ls~N~l~~~~p~~~~------------ 208 (947)
++|++|++++|+++|.+|..+.
T Consensus 230 ~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~ 309 (562)
T 3a79_B 230 LNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMI 309 (562)
T ss_dssp CCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEE
T ss_pred ccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheeh
Confidence 2677777777888877777651
Q ss_pred --------------------CCCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccCCcCcCCCC-CCCCCCCCCEEEc
Q 002255 209 --------------------KSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPLP-DLSGLSSLQDFSV 267 (947)
Q Consensus 209 --------------------~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~l 267 (947)
..+|+.|++++|.+..... ...+++|++|+|++|++++.+| .+.++++|++|+|
T Consensus 310 ~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~-----~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 384 (562)
T 3a79_B 310 EHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVC-----PPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLIL 384 (562)
T ss_dssp EEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCC-----CSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEEC
T ss_pred hhcccceeecChhhhhhhhccCcceEEEccCCCcccccC-----ccCCCCceEEECCCCccccchhhhhcccCCCCEEEC
Confidence 1235666666665543221 1568999999999999999766 5889999999999
Q ss_pred cCCcccc--CCCccccCCCCCCeEeccCCcccccCCCC-CCCcccccccCCCCcccCcCCCcCCCccceeeecccccCCh
Q 002255 268 RDNQLTG--IVPSSLVNLHSLAVVNLTNNLFQGQTPKF-NSPVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYP 344 (947)
Q Consensus 268 ~~N~l~g--~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 344 (947)
++|++++ .+|..+.++++|++|+|++|++++.+|.. +... .+...++...+.+.
T Consensus 385 ~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l-------~~L~~L~l~~n~l~---------------- 441 (562)
T 3a79_B 385 QRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWA-------ESILVLNLSSNMLT---------------- 441 (562)
T ss_dssp CSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCC-------TTCCEEECCSSCCC----------------
T ss_pred CCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCc-------ccCCEEECCCCCCC----------------
Confidence 9999996 34577999999999999999999866642 1110 11111111111111
Q ss_pred hhhhccCCCCCCCCCCCCCcccCCC-CceeEEEecCCCceeeccccccCCccCCeEeccCCcccccCCCc-CCCCCCCCc
Q 002255 345 AVLAESWKGNNPCNSDWKGVSCDAG-GNITVVNLKNLGLSGTISSNFSRLTSLRQLMLSGNELTGTIPKE-LTTLPSLEM 422 (947)
Q Consensus 345 ~~l~~~~~~~~~~~~~~~~~~~~~~-~~L~~L~Ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~-l~~l~~L~~ 422 (947)
+..+... .+|+.|+|++|+++ .+|..+.++++|+.|+|++|+|+ .+|.. +..+++|+.
T Consensus 442 ------------------~~~~~~l~~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~ 501 (562)
T 3a79_B 442 ------------------GSVFRCLPPKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQY 501 (562)
T ss_dssp ------------------GGGGSSCCTTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCC
T ss_pred ------------------cchhhhhcCcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCE
Confidence 0111111 35667777777666 56666666677777777777776 56655 666677777
Q ss_pred cccccccccccCC
Q 002255 423 LDVSNNHLFGKVP 435 (947)
Q Consensus 423 L~ls~N~l~g~iP 435 (947)
|+|++|+++|.+|
T Consensus 502 L~l~~N~~~c~c~ 514 (562)
T 3a79_B 502 IWLHDNPWDCTCP 514 (562)
T ss_dssp EECCSCCBCCCHH
T ss_pred EEecCCCcCCCcc
Confidence 7777777766665
No 283
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.97 E-value=2.4e-31 Score=315.49 Aligned_cols=344 Identities=19% Similarity=0.163 Sum_probs=255.1
Q ss_pred CcEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCcCCCC-CcccccCCCCCcEEe
Q 002255 65 NRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNFTSV-PSDFFKGLTSLQTIS 142 (947)
Q Consensus 65 ~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~ 142 (947)
.+++.|+|++|++++..|..|+++++|++|+|++|++++.+| .|.++++|++|+|++|+++++ .+..|.++++|++|+
T Consensus 50 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~ 129 (549)
T 2z81_A 50 ANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLR 129 (549)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEE
T ss_pred CcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEE
Confidence 579999999999998888899999999999999999999888 499999999999999999975 356789999999999
Q ss_pred ccCCCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCC----------------------CCCCccEEEccCCccc
Q 002255 143 LDYNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGD----------------------TIPGLMHLHLAFNFLQ 200 (947)
Q Consensus 143 Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~----------------------~l~~L~~L~Ls~N~l~ 200 (947)
|++|++.+...+..+.++++|++|++++|.+++.+|..++.. .+++|++|+|++|+++
T Consensus 130 L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~ 209 (549)
T 2z81_A 130 IGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLA 209 (549)
T ss_dssp EEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCT
T ss_pred CCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccc
Confidence 999985443344689999999999999999999888877521 2578888888888888
Q ss_pred CcC--Ccccc--CC------------------------------------------------------------------
Q 002255 201 GPI--PLSFG--KS------------------------------------------------------------------ 210 (947)
Q Consensus 201 ~~~--p~~~~--~~------------------------------------------------------------------ 210 (947)
+.. |..+. ..
T Consensus 210 ~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~ 289 (549)
T 2z81_A 210 RFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIR 289 (549)
T ss_dssp TCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEE
T ss_pred cccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhccccccccc
Confidence 632 11110 01
Q ss_pred ---------------------CCceeeeccCCCCCCCCCchhh-hcCCCCCcEEEccCCcCcCCCC----CCCCCCCCCE
Q 002255 211 ---------------------SIQTLWLNGQKGDSKLNGSVAV-IQNMTSLTQLWLHGNSFTGPLP----DLSGLSSLQD 264 (947)
Q Consensus 211 ---------------------~L~~L~l~~n~~~~~~~~~~~~-~~~l~~L~~L~L~~N~l~~~~~----~~~~l~~L~~ 264 (947)
+|+.|++++|.+.. .+.. +.++++|+.|+|++|++++.+| .+..+++|++
T Consensus 290 ~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~~----ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~ 365 (549)
T 2z81_A 290 RLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFL----VPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQT 365 (549)
T ss_dssp SCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCCC----CCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCE
T ss_pred ccccchhhhcccchhhhhhcccceEEEeccCcccc----CCHHHHhcCccccEEEccCCccccccccchhhhhccccCcE
Confidence 23334444443321 1222 3568999999999999998653 3678999999
Q ss_pred EEccCCccccCCC--ccccCCCCCCeEeccCCcccccCCCCCCCcccccccCCCCcccCcCCCcCCCccceeeecccccC
Q 002255 265 FSVRDNQLTGIVP--SSLVNLHSLAVVNLTNNLFQGQTPKFNSPVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVG 342 (947)
Q Consensus 265 L~l~~N~l~g~~p--~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 342 (947)
|+|++|++++..+ ..+..+++|++|+|++|++++ +|..+.. ..+...++...+.+.. ....+
T Consensus 366 L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~~~~-------~~~L~~L~Ls~N~l~~-------l~~~~- 429 (549)
T 2z81_A 366 LVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFHP-MPDSCQW-------PEKMRFLNLSSTGIRV-------VKTCI- 429 (549)
T ss_dssp EECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCCC-CCSCCCC-------CTTCCEEECTTSCCSC-------CCTTS-
T ss_pred EEccCCcccccccchhhhhcCCCCCEEECCCCCCcc-CChhhcc-------cccccEEECCCCCccc-------ccchh-
Confidence 9999999986432 568899999999999999984 5543321 1222333333332221 00000
Q ss_pred ChhhhhccCCCCCCCCCCCCCcccCCCCceeEEEecCCCceeeccccccCCccCCeEeccCCcccccCCCcCCCCCCCCc
Q 002255 343 YPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLSGTISSNFSRLTSLRQLMLSGNELTGTIPKELTTLPSLEM 422 (947)
Q Consensus 343 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~ 422 (947)
+..+.......+. +.+. ....++|+.|+|++|+|+ .||. .+.+++|+.|+|++|+|++.+|..+..+++|+.
T Consensus 430 -~~~L~~L~Ls~N~----l~~~-~~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 501 (549)
T 2z81_A 430 -PQTLEVLDVSNNN----LDSF-SLFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQK 501 (549)
T ss_dssp -CTTCSEEECCSSC----CSCC-CCCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCE
T ss_pred -cCCceEEECCCCC----hhhh-cccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCE
Confidence 0111112222221 1221 135678999999999999 7887 578999999999999999888888999999999
Q ss_pred cccccccccccCCC
Q 002255 423 LDVSNNHLFGKVPN 436 (947)
Q Consensus 423 L~ls~N~l~g~iP~ 436 (947)
|+|++|+++|.+|.
T Consensus 502 L~l~~N~~~~~~~~ 515 (549)
T 2z81_A 502 IWLHTNPWDCSCPR 515 (549)
T ss_dssp EECCSSCBCCCHHH
T ss_pred EEecCCCccCCCcc
Confidence 99999999999983
No 284
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=4.2e-30 Score=283.81 Aligned_cols=285 Identities=19% Similarity=0.250 Sum_probs=217.2
Q ss_pred EEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEeccC
Q 002255 67 VTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDY 145 (947)
Q Consensus 67 v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 145 (947)
++.++++++++. .+|..+. ++|++|+|++|.+++.+| .|.++++|++|+|++|+++++++..|..+++|++|+|++
T Consensus 35 l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 111 (332)
T 2ft3_A 35 LRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISK 111 (332)
T ss_dssp TTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCS
T ss_pred CCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCC
Confidence 345666667776 6777664 689999999999988877 789999999999999999999888899999999999999
Q ss_pred CCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCccc--CcCCccccCCCCceeeeccCCCC
Q 002255 146 NSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQ--GPIPLSFGKSSIQTLWLNGQKGD 223 (947)
Q Consensus 146 N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~~~L~~L~l~~n~~~ 223 (947)
|++.. +|..+. ++|++|++++|.+++..+..+. .+++|++|+|++|+++ +..|..+...+|+.|++++|.+.
T Consensus 112 n~l~~--l~~~~~--~~L~~L~l~~n~i~~~~~~~~~--~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~ 185 (332)
T 2ft3_A 112 NHLVE--IPPNLP--SSLVELRIHDNRIRKVPKGVFS--GLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLT 185 (332)
T ss_dssp SCCCS--CCSSCC--TTCCEEECCSSCCCCCCSGGGS--SCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBCS
T ss_pred CcCCc--cCcccc--ccCCEEECCCCccCccCHhHhC--CCccCCEEECCCCccccCCCCcccccCCccCEEECcCCCCC
Confidence 99874 666655 7899999999999876666676 6889999999999986 36677776667888888888776
Q ss_pred CCCCCchhhhcCCCCCcEEEccCCcCcCCCC-CCCCCCCCCEEEccCCccccCCCccccCCCCCCeEeccCCcccccCCC
Q 002255 224 SKLNGSVAVIQNMTSLTQLWLHGNSFTGPLP-DLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQTPK 302 (947)
Q Consensus 224 ~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~ 302 (947)
...... .++|+.|+|++|.+++..+ .+..+++|++|+|++|++++..+..+..+++|+.|+|++|+++ .+|.
T Consensus 186 ~l~~~~------~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~ 258 (332)
T 2ft3_A 186 GIPKDL------PETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPA 258 (332)
T ss_dssp SCCSSS------CSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCT
T ss_pred ccCccc------cCCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecCh
Confidence 643322 2678888888888887765 4777888888888888888777777888888888888888877 3443
Q ss_pred CCCCcccccccCCCCcccCcCCCcCCCccceeeecccccCChhhhhccCCCCCCCCCCCCCcccCCCCceeEEEecCCCc
Q 002255 303 FNSPVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGL 382 (947)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l 382 (947)
.+ ...++|+.|+|++|.+
T Consensus 259 ~l--------------------------------------------------------------~~l~~L~~L~l~~N~l 276 (332)
T 2ft3_A 259 GL--------------------------------------------------------------PDLKLLQVVYLHTNNI 276 (332)
T ss_dssp TG--------------------------------------------------------------GGCTTCCEEECCSSCC
T ss_pred hh--------------------------------------------------------------hcCccCCEEECCCCCC
Confidence 11 1223678888888888
Q ss_pred eeeccccccCC------ccCCeEeccCCccc--ccCCCcCCCCCCCCcccccccc
Q 002255 383 SGTISSNFSRL------TSLRQLMLSGNELT--GTIPKELTTLPSLEMLDVSNNH 429 (947)
Q Consensus 383 ~g~ip~~~~~l------~~L~~L~Ls~N~l~--g~iP~~l~~l~~L~~L~ls~N~ 429 (947)
++..+..|..+ .+|+.|+|++|.+. +..|..|..+++|+.|+|++|+
T Consensus 277 ~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 277 TKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred CccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 87666666543 56888888888887 5666778888888888888774
No 285
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=3.8e-31 Score=294.94 Aligned_cols=285 Identities=17% Similarity=0.247 Sum_probs=234.3
Q ss_pred CCCCCCCceeEeCCCCcEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCcCCCCC
Q 002255 50 DPDPCKWKHIQCSPSNRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNFTSVP 128 (947)
Q Consensus 50 ~~d~C~w~gv~C~~~~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~l~~~~ 128 (947)
...+|.|.|+ |+ +++++++ .+|..+. ++|++|+|++|++++.++ .|.++++|++|+|++|++++++
T Consensus 26 ~~~~C~~~~~-c~---------~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 92 (353)
T 2z80_A 26 ASLSCDRNGI-CK---------GSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIE 92 (353)
T ss_dssp -CCEECTTSE-EE---------CCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEEC
T ss_pred cCCCCCCCeE-ee---------CCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccC
Confidence 3567999887 64 4566777 7787765 599999999999998877 7999999999999999999999
Q ss_pred cccccCCCCCcEEeccCCCCCCCCCcccccCCCCCCeEeccCceeeeccC-cccCCCCCCCccEEEccCCc-ccCcCCcc
Q 002255 129 SDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGANITGTIP-DFLGGDTIPGLMHLHLAFNF-LQGPIPLS 206 (947)
Q Consensus 129 ~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p-~~~~~~~l~~L~~L~Ls~N~-l~~~~p~~ 206 (947)
+..|.++++|++|+|++|++.. ..+..+.++++|++|++++|++++..+ ..+. .+++|++|+|++|+ +++..+..
T Consensus 93 ~~~~~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~--~l~~L~~L~l~~n~~~~~~~~~~ 169 (353)
T 2z80_A 93 EDSFSSLGSLEHLDLSYNYLSN-LSSSWFKPLSSLTFLNLLGNPYKTLGETSLFS--HLTKLQILRVGNMDTFTKIQRKD 169 (353)
T ss_dssp TTTTTTCTTCCEEECCSSCCSS-CCHHHHTTCTTCSEEECTTCCCSSSCSSCSCT--TCTTCCEEEEEESSSCCEECTTT
T ss_pred HhhcCCCCCCCEEECCCCcCCc-CCHhHhCCCccCCEEECCCCCCcccCchhhhc--cCCCCcEEECCCCccccccCHHH
Confidence 9999999999999999999975 344458999999999999999985433 3565 68999999999995 65444444
Q ss_pred ccCCCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccCCcCcCCCC-CCCCCCCCCEEEccCCccccCCCccccCCCC
Q 002255 207 FGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPLP-DLSGLSSLQDFSVRDNQLTGIVPSSLVNLHS 285 (947)
Q Consensus 207 ~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~ 285 (947)
+ .++++|+.|+|++|.+++..| .+..+++|++|++++|+++...+..+..+++
T Consensus 170 ~--------------------------~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~ 223 (353)
T 2z80_A 170 F--------------------------AGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSS 223 (353)
T ss_dssp T--------------------------TTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTT
T ss_pred c--------------------------cCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhccc
Confidence 4 358999999999999999866 5888999999999999997443344556999
Q ss_pred CCeEeccCCcccccCCCCCCCcccccccCCCCcccCcCCCcCCCccceeeecccccCChhhhhccCCCCCCCCCCCCCcc
Q 002255 286 LAVVNLTNNLFQGQTPKFNSPVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVS 365 (947)
Q Consensus 286 L~~L~Ls~N~l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~ 365 (947)
|+.|+|++|++++..+..+..
T Consensus 224 L~~L~L~~n~l~~~~~~~l~~----------------------------------------------------------- 244 (353)
T 2z80_A 224 VECLELRDTDLDTFHFSELST----------------------------------------------------------- 244 (353)
T ss_dssp EEEEEEESCBCTTCCCC---------------------------------------------------------------
T ss_pred ccEEECCCCcccccccccccc-----------------------------------------------------------
Confidence 999999999999765432110
Q ss_pred cCCCCceeEEEecCCCcee----eccccccCCccCCeEeccCCcccccCCCc-CCCCCCCCccccccccccccCCC
Q 002255 366 CDAGGNITVVNLKNLGLSG----TISSNFSRLTSLRQLMLSGNELTGTIPKE-LTTLPSLEMLDVSNNHLFGKVPN 436 (947)
Q Consensus 366 ~~~~~~L~~L~Ls~n~l~g----~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~-l~~l~~L~~L~ls~N~l~g~iP~ 436 (947)
......++.++|++|.+++ .+|..+.++++|+.|+|++|+|+ .+|.. |..+++|++|+|++|+++|.+|.
T Consensus 245 ~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~~~~ 319 (353)
T 2z80_A 245 GETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCPR 319 (353)
T ss_dssp --CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred ccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCcCCC
Confidence 0112357788888888887 58899999999999999999999 78887 48999999999999999999883
No 286
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.97 E-value=9.8e-30 Score=315.93 Aligned_cols=207 Identities=16% Similarity=0.163 Sum_probs=172.1
Q ss_pred EEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCc-CCCCCcccccCCCCCcEEeccC
Q 002255 68 TRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNN-FTSVPSDFFKGLTSLQTISLDY 145 (947)
Q Consensus 68 ~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~Ls~ 145 (947)
..+++++++++ .+|. ..++|++|||++|.+++..| .|.++++|++|+|++|. +..+++..|.++++|++|+|++
T Consensus 7 ~~~dcs~~~L~-~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~ 82 (844)
T 3j0a_A 7 RIAFYRFCNLT-QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGS 82 (844)
T ss_dssp EEEEESCCCSS-CCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTT
T ss_pred eEEEccCCCCC-CCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCC
Confidence 35678888988 6776 45899999999999999877 89999999999999995 4567788999999999999999
Q ss_pred CCCCCCCCcccccCCCCCCeEeccCceeeeccCcc--cCCCCCCCccEEEccCCcccCcCC-ccccC-CCCceeeeccCC
Q 002255 146 NSFDSWVIPESLKDATGLQRFSANGANITGTIPDF--LGGDTIPGLMHLHLAFNFLQGPIP-LSFGK-SSIQTLWLNGQK 221 (947)
Q Consensus 146 N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~--~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~-~~L~~L~l~~n~ 221 (947)
|++.. ..|..|+++++|++|+|++|.+++.+|.. +. .+++|++|+|++|.+++..+ ..|+. .+|+.|+|++|.
T Consensus 83 N~l~~-~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~--~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~ 159 (844)
T 3j0a_A 83 SKIYF-LHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFR--NLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQ 159 (844)
T ss_dssp CCCCE-ECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCS--SCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSC
T ss_pred CcCcc-cCHhHccCCcccCEeeCcCCCCCcccccCcccc--ccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCc
Confidence 99976 67999999999999999999999877765 66 79999999999999998765 45654 789999999998
Q ss_pred CCCCCCCchhhhcCCCCCcEEEccCCcCcCCCCC-CCCCCC------CCEEEccCCccccCCCccccC
Q 002255 222 GDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPLPD-LSGLSS------LQDFSVRDNQLTGIVPSSLVN 282 (947)
Q Consensus 222 ~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~------L~~L~l~~N~l~g~~p~~l~~ 282 (947)
+..........+.+ ++|+.|+|++|.+++..+. +..+.+ |+.|++++|++++.+|..+..
T Consensus 160 i~~~~~~~l~~l~~-~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~ 226 (844)
T 3j0a_A 160 IFLVCEHELEPLQG-KTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSN 226 (844)
T ss_dssp CCCCCSGGGHHHHH-CSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGG
T ss_pred CCeeCHHHcccccC-CccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHh
Confidence 88776655444332 7889999999999887663 444444 899999999888777766654
No 287
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=2.6e-29 Score=277.28 Aligned_cols=214 Identities=22% Similarity=0.334 Sum_probs=127.3
Q ss_pred EEEecCCcccccCcccccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEeccCCC
Q 002255 69 RIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNS 147 (947)
Q Consensus 69 ~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 147 (947)
.+++++++++ .+|..+. +.|++|+|++|++++.++ .|.++++|++|+|++|+++++.+..|..+++|++|+|++|+
T Consensus 35 ~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 111 (330)
T 1xku_A 35 VVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQ 111 (330)
T ss_dssp EEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSC
T ss_pred EEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCc
Confidence 4445555555 5565554 578888888888887776 67888888888888888888877778888888888888888
Q ss_pred CCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCcccC--cCCccccC-CCCceeeeccCCCCC
Q 002255 148 FDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQG--PIPLSFGK-SSIQTLWLNGQKGDS 224 (947)
Q Consensus 148 l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~-~~L~~L~l~~n~~~~ 224 (947)
+.. +|..+. ++|++|++++|.+++..+..+. .+++|++|+|++|+++. ..+..+.. .+|+.|++++|.+..
T Consensus 112 l~~--l~~~~~--~~L~~L~l~~n~l~~~~~~~~~--~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 185 (330)
T 1xku_A 112 LKE--LPEKMP--KTLQELRVHENEITKVRKSVFN--GLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT 185 (330)
T ss_dssp CSB--CCSSCC--TTCCEEECCSSCCCBBCHHHHT--TCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS
T ss_pred CCc--cChhhc--ccccEEECCCCcccccCHhHhc--CCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc
Confidence 764 565554 6788888888888876666666 57788888888888753 44444432 233333333333332
Q ss_pred CCCCchhhhcCCCCCcEEEccCCcCcCCCC-CCCCCCCCCEEEccCCccccCCCccccCCCCCCeEeccCCccc
Q 002255 225 KLNGSVAVIQNMTSLTQLWLHGNSFTGPLP-DLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQ 297 (947)
Q Consensus 225 ~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~ 297 (947)
..... .++|+.|+|++|.+++..+ .+..+++|++|+|++|++++..+..+..+++|++|+|++|+++
T Consensus 186 l~~~~------~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 253 (330)
T 1xku_A 186 IPQGL------PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV 253 (330)
T ss_dssp CCSSC------CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS
T ss_pred CCccc------cccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc
Confidence 21111 1334444444444444333 2334444444444444444333334444444444444444443
No 288
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.97 E-value=6.4e-30 Score=289.18 Aligned_cols=310 Identities=13% Similarity=0.111 Sum_probs=231.5
Q ss_pred cCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCCcccccCCCCCC
Q 002255 86 NSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQ 164 (947)
Q Consensus 86 ~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~ 164 (947)
..+++|+.|++++|.++..++ .|.++++|++|+|++|.++++++..|..+++|++|+|++|++.. ..|..++++++|+
T Consensus 42 ~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~ 120 (390)
T 3o6n_A 42 ITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRY-LPPHVFQNVPLLT 120 (390)
T ss_dssp GGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCC
T ss_pred cccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCc-CCHHHhcCCCCCC
Confidence 346899999999999988776 47889999999999999999999999999999999999999976 5677899999999
Q ss_pred eEeccCceeeeccCcccCCCCCCCccEEEccCCcccCcCCccccC-CCCceeeeccCCCCCCCCCchhhhcCCCCCcEEE
Q 002255 165 RFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGK-SSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLW 243 (947)
Q Consensus 165 ~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~ 243 (947)
+|++++|.++...+..+. .+++|++|+|++|++++..|..+.. .+|+.|++++|.+.... +..+++|+.|+
T Consensus 121 ~L~L~~n~l~~l~~~~~~--~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~------~~~l~~L~~L~ 192 (390)
T 3o6n_A 121 VLVLERNDLSSLPRGIFH--NTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD------LSLIPSLFHAN 192 (390)
T ss_dssp EEECCSSCCCCCCTTTTT--TCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC------GGGCTTCSEEE
T ss_pred EEECCCCccCcCCHHHhc--CCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccc------cccccccceee
Confidence 999999999955444455 6899999999999999888887865 78999999999987652 45689999999
Q ss_pred ccCCcCcCCCCCCCCCCCCCEEEccCCccccCCCccccCCCCCCeEeccCCcccccCCCCCCCcccccccCCCCcccCcC
Q 002255 244 LHGNSFTGPLPDLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQTPKFNSPVRFDMAKGSNSFCLDDA 323 (947)
Q Consensus 244 L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~~~~~~~~~~~ 323 (947)
+++|.+++. ....+|+.|++++|+++.. |.. ..++|+.|+|++|.+++. +. +....+...++..
T Consensus 193 l~~n~l~~~----~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~-~~--------l~~l~~L~~L~Ls 256 (390)
T 3o6n_A 193 VSYNLLSTL----AIPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT-AW--------LLNYPGLVEVDLS 256 (390)
T ss_dssp CCSSCCSEE----ECCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC-GG--------GGGCTTCSEEECC
T ss_pred ccccccccc----CCCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc-HH--------HcCCCCccEEECC
Confidence 999998863 3346899999999999854 443 357999999999999864 11 1122223333333
Q ss_pred CCcCCCccceeeecccccCChhhhhccCCCCCCCCCCCCCcccCCCCceeEEEecCCCceeeccccccCCccCCeEeccC
Q 002255 324 GVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLSGTISSNFSRLTSLRQLMLSG 403 (947)
Q Consensus 324 ~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g~ip~~~~~l~~L~~L~Ls~ 403 (947)
.+.+.... ...+...++|+.|+|++|++++ +|..+..+++|+.|+|++
T Consensus 257 ~n~l~~~~-------------------------------~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~ 304 (390)
T 3o6n_A 257 YNELEKIM-------------------------------YHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSH 304 (390)
T ss_dssp SSCCCEEE-------------------------------SGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCS
T ss_pred CCcCCCcC-------------------------------hhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCC
Confidence 22221100 0012234567777777777764 455666677777777777
Q ss_pred CcccccCCCcCCCCCCCCccccccccccccCCCCccc-eeeecCCCCCCCC
Q 002255 404 NELTGTIPKELTTLPSLEMLDVSNNHLFGKVPNFRQN-VIVKTDGNPDIGK 453 (947)
Q Consensus 404 N~l~g~iP~~l~~l~~L~~L~ls~N~l~g~iP~~~~~-~~~~~~~n~~~~~ 453 (947)
|+++ .+|..+..+++|+.|+|++|+++......... ..+.+.+|++.|.
T Consensus 305 n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~L~~L~l~~N~~~~~ 354 (390)
T 3o6n_A 305 NHLL-HVERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKNLTLSHNDWDCN 354 (390)
T ss_dssp SCCC-CCGGGHHHHTTCSEEECCSSCCCCCCCCTTCCCSEEECCSSCEEHH
T ss_pred Ccce-ecCccccccCcCCEEECCCCccceeCchhhccCCEEEcCCCCccch
Confidence 7777 66666777777777777777776543322222 2455677776664
No 289
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.97 E-value=3.4e-29 Score=278.61 Aligned_cols=214 Identities=20% Similarity=0.341 Sum_probs=164.1
Q ss_pred CcEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCCCCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEecc
Q 002255 65 NRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLD 144 (947)
Q Consensus 65 ~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 144 (947)
.+++.|+++++++. .++ .+..+++|++|+|++|.+++..+ +.++++|++|+|++|.++.++ .+..+++|++|+|+
T Consensus 44 ~~L~~L~l~~~~i~-~~~-~~~~~~~L~~L~l~~n~i~~~~~-~~~l~~L~~L~L~~n~i~~~~--~~~~l~~L~~L~l~ 118 (347)
T 4fmz_A 44 ESITKLVVAGEKVA-SIQ-GIEYLTNLEYLNLNGNQITDISP-LSNLVKLTNLYIGTNKITDIS--ALQNLTNLRELYLN 118 (347)
T ss_dssp TTCSEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCCG--GGTTCTTCSEEECT
T ss_pred ccccEEEEeCCccc-cch-hhhhcCCccEEEccCCccccchh-hhcCCcCCEEEccCCcccCch--HHcCCCcCCEEECc
Confidence 46788888888887 444 47888888888888888886555 888888888888888888863 47888888888888
Q ss_pred CCCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCcccCcCCccccCCCCceeeeccCCCCC
Q 002255 145 YNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDS 224 (947)
Q Consensus 145 ~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~l~~n~~~~ 224 (947)
+|++.. ++. +..+++|++|++++|.....++. +. .+++|++|++++|.+.+..+ .-...+|+.|++++|.+..
T Consensus 119 ~n~i~~--~~~-~~~l~~L~~L~l~~n~~~~~~~~-~~--~l~~L~~L~l~~~~~~~~~~-~~~l~~L~~L~l~~n~l~~ 191 (347)
T 4fmz_A 119 EDNISD--ISP-LANLTKMYSLNLGANHNLSDLSP-LS--NMTGLNYLTVTESKVKDVTP-IANLTDLYSLSLNYNQIED 191 (347)
T ss_dssp TSCCCC--CGG-GTTCTTCCEEECTTCTTCCCCGG-GT--TCTTCCEEECCSSCCCCCGG-GGGCTTCSEEECTTSCCCC
T ss_pred CCcccC--chh-hccCCceeEEECCCCCCcccccc-hh--hCCCCcEEEecCCCcCCchh-hccCCCCCEEEccCCcccc
Confidence 888865 444 88888888888888866655554 44 67888888888888875444 2233678888888887765
Q ss_pred CCCCchhhhcCCCCCcEEEccCCcCcCCCCCCCCCCCCCEEEccCCccccCCCccccCCCCCCeEeccCCcccc
Q 002255 225 KLNGSVAVIQNMTSLTQLWLHGNSFTGPLPDLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQG 298 (947)
Q Consensus 225 ~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g 298 (947)
... +..+++|+.|++++|.+++..+ +..+++|++|++++|++++. +. +..+++|++|++++|.+++
T Consensus 192 ~~~-----~~~l~~L~~L~l~~n~l~~~~~-~~~~~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~ 257 (347)
T 4fmz_A 192 ISP-----LASLTSLHYFTAYVNQITDITP-VANMTRLNSLKIGNNKITDL-SP-LANLSQLTWLEIGTNQISD 257 (347)
T ss_dssp CGG-----GGGCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC
T ss_pred ccc-----ccCCCccceeecccCCCCCCch-hhcCCcCCEEEccCCccCCC-cc-hhcCCCCCEEECCCCccCC
Confidence 432 5678888888888888887655 77788888888888888854 33 8888888888888888774
No 290
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.97 E-value=3.5e-29 Score=278.45 Aligned_cols=281 Identities=24% Similarity=0.354 Sum_probs=237.9
Q ss_pred CcEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCCCCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEecc
Q 002255 65 NRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLD 144 (947)
Q Consensus 65 ~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 144 (947)
.+++.|+|++|.+++ +++ +..+++|++|+|++|.++. ++.+.++++|++|+|++|.++++++ +..+++|++|+++
T Consensus 66 ~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~L~~n~i~~-~~~~~~l~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~l~ 140 (347)
T 4fmz_A 66 TNLEYLNLNGNQITD-ISP-LSNLVKLTNLYIGTNKITD-ISALQNLTNLRELYLNEDNISDISP--LANLTKMYSLNLG 140 (347)
T ss_dssp TTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CGGGTTCTTCSEEECTTSCCCCCGG--GTTCTTCCEEECT
T ss_pred CCccEEEccCCcccc-chh-hhcCCcCCEEEccCCcccC-chHHcCCCcCCEEECcCCcccCchh--hccCCceeEEECC
Confidence 579999999999984 555 9999999999999999986 4689999999999999999999876 8899999999999
Q ss_pred CCCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCcccCcCCccccCCCCceeeeccCCCCC
Q 002255 145 YNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDS 224 (947)
Q Consensus 145 ~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~l~~n~~~~ 224 (947)
+|.... .+..+..+++|++|++++|.+.+..+ +. .+++|++|++++|++++..+ .-...+|+.|++++|.+..
T Consensus 141 ~n~~~~--~~~~~~~l~~L~~L~l~~~~~~~~~~--~~--~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~ 213 (347)
T 4fmz_A 141 ANHNLS--DLSPLSNMTGLNYLTVTESKVKDVTP--IA--NLTDLYSLSLNYNQIEDISP-LASLTSLHYFTAYVNQITD 213 (347)
T ss_dssp TCTTCC--CCGGGTTCTTCCEEECCSSCCCCCGG--GG--GCTTCSEEECTTSCCCCCGG-GGGCTTCCEEECCSSCCCC
T ss_pred CCCCcc--cccchhhCCCCcEEEecCCCcCCchh--hc--cCCCCCEEEccCCccccccc-ccCCCccceeecccCCCCC
Confidence 997644 34559999999999999999986554 54 68999999999999985443 2234789999999998876
Q ss_pred CCCCchhhhcCCCCCcEEEccCCcCcCCCCCCCCCCCCCEEEccCCccccCCCccccCCCCCCeEeccCCcccccCCCCC
Q 002255 225 KLNGSVAVIQNMTSLTQLWLHGNSFTGPLPDLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQTPKFN 304 (947)
Q Consensus 225 ~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~ 304 (947)
... +..+++|+.|+|++|.+++..+ +..+++|++|++++|++++. ..+..+++|++|++++|++++. |.
T Consensus 214 ~~~-----~~~~~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~-~~-- 282 (347)
T 4fmz_A 214 ITP-----VANMTRLNSLKIGNNKITDLSP-LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI-SV-- 282 (347)
T ss_dssp CGG-----GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC-GG--
T ss_pred Cch-----hhcCCcCCEEEccCCccCCCcc-hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC-hh--
Confidence 533 6678999999999999998766 88899999999999999853 5689999999999999998753 11
Q ss_pred CCcccccccCCCCcccCcCCCcCCCccceeeecccccCChhhhhccCCCCCCCCCCCCCcccCCCCceeEEEecCCCcee
Q 002255 305 SPVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLSG 384 (947)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g 384 (947)
+..+++|+.|+|++|.+++
T Consensus 283 -------------------------------------------------------------~~~l~~L~~L~L~~n~l~~ 301 (347)
T 4fmz_A 283 -------------------------------------------------------------LNNLSQLNSLFLNNNQLGN 301 (347)
T ss_dssp -------------------------------------------------------------GGGCTTCSEEECCSSCCCG
T ss_pred -------------------------------------------------------------hcCCCCCCEEECcCCcCCC
Confidence 1123479999999999999
Q ss_pred eccccccCCccCCeEeccCCcccccCCCcCCCCCCCCcccccccccc
Q 002255 385 TISSNFSRLTSLRQLMLSGNELTGTIPKELTTLPSLEMLDVSNNHLF 431 (947)
Q Consensus 385 ~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ls~N~l~ 431 (947)
..|..++.+++|+.|+|++|++++..| +..+++|+.|++++|+|+
T Consensus 302 ~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 302 EDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp GGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred cChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 999999999999999999999996666 889999999999999985
No 291
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.97 E-value=3e-29 Score=290.50 Aligned_cols=303 Identities=22% Similarity=0.336 Sum_probs=203.5
Q ss_pred CcEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCCCCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEecc
Q 002255 65 NRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLD 144 (947)
Q Consensus 65 ~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 144 (947)
.+++.|+|++|.+++. ++ +.++++|++|+|++|.+++..+ +.++++|++|+|++|+++++++ +..+++|++|+|+
T Consensus 68 ~~L~~L~Ls~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~ 142 (466)
T 1o6v_A 68 NNLTQINFSNNQLTDI-TP-LKNLTKLVDILMNNNQIADITP-LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELS 142 (466)
T ss_dssp TTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEE
T ss_pred cCCCEEECCCCccCCc-hh-hhccccCCEEECCCCccccChh-hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEECC
Confidence 3677777777777744 33 7777777777777777776665 7777777777777777777654 6777777777777
Q ss_pred CCCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCcccCcCCccccCCCCceeeeccCCCCC
Q 002255 145 YNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDS 224 (947)
Q Consensus 145 ~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~l~~n~~~~ 224 (947)
+|.+.. ++ .+..+++|++|+++ |.+.+..+ +. .+++|++|+|++|++++. +......+|+.|++++|.+..
T Consensus 143 ~n~l~~--~~-~~~~l~~L~~L~l~-~~~~~~~~--~~--~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l~~ 213 (466)
T 1o6v_A 143 SNTISD--IS-ALSGLTSLQQLSFG-NQVTDLKP--LA--NLTTLERLDISSNKVSDI-SVLAKLTNLESLIATNNQISD 213 (466)
T ss_dssp EEEECC--CG-GGTTCTTCSEEEEE-ESCCCCGG--GT--TCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCC
T ss_pred CCccCC--Ch-hhccCCcccEeecC-CcccCchh--hc--cCCCCCEEECcCCcCCCC-hhhccCCCCCEEEecCCcccc
Confidence 777754 33 36666666666664 34443322 44 578888888888888753 332233678888888887765
Q ss_pred CCCCchhhhcCCCCCcEEEccCCcCcCCCCCCCCCCCCCEEEccCCccccCCCccccCCCCCCeEeccCCcccccCCCCC
Q 002255 225 KLNGSVAVIQNMTSLTQLWLHGNSFTGPLPDLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQTPKFN 304 (947)
Q Consensus 225 ~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~ 304 (947)
... +..+++|+.|+|++|.+++. +.+..+++|+.|++++|++++..| +..+++|+.|+|++|++++..+ .
T Consensus 214 ~~~-----~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~-~- 283 (466)
T 1o6v_A 214 ITP-----LGILTNLDELSLNGNQLKDI-GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP-L- 283 (466)
T ss_dssp CGG-----GGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG-G-
T ss_pred ccc-----ccccCCCCEEECCCCCcccc-hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc-c-
Confidence 432 55678888888888888764 567778888888888888886544 7888888888888888876543 1
Q ss_pred CCcccccccCCCCcccCcCCCcCCCccceeeecccccCChhhhhccCCCCCCCCCCCCCcccCCCCceeEEEecCCCcee
Q 002255 305 SPVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLSG 384 (947)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g 384 (947)
....+...++...+.+.... ....+++|+.|+|++|.+++
T Consensus 284 -------~~l~~L~~L~L~~n~l~~~~---------------------------------~~~~l~~L~~L~L~~n~l~~ 323 (466)
T 1o6v_A 284 -------AGLTALTNLELNENQLEDIS---------------------------------PISNLKNLTYLTLYFNNISD 323 (466)
T ss_dssp -------TTCTTCSEEECCSSCCSCCG---------------------------------GGGGCTTCSEEECCSSCCSC
T ss_pred -------cCCCccCeEEcCCCcccCch---------------------------------hhcCCCCCCEEECcCCcCCC
Confidence 11112222222222111100 02234567777777777776
Q ss_pred eccccccCCccCCeEeccCCcccccCCCcCCCCCCCCccccccccccccCC
Q 002255 385 TISSNFSRLTSLRQLMLSGNELTGTIPKELTTLPSLEMLDVSNNHLFGKVP 435 (947)
Q Consensus 385 ~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ls~N~l~g~iP 435 (947)
..| ++.+++|+.|+|++|++++. ..+..+++|+.|++++|++++.+|
T Consensus 324 ~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~ 370 (466)
T 1o6v_A 324 ISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP 370 (466)
T ss_dssp CGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG
T ss_pred chh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch
Confidence 655 66777777777777777753 467777777777777777777776
No 292
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.96 E-value=5e-29 Score=275.25 Aligned_cols=283 Identities=21% Similarity=0.274 Sum_probs=239.4
Q ss_pred CCCceeEeCCC----------CcEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCC
Q 002255 54 CKWKHIQCSPS----------NRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDN 122 (947)
Q Consensus 54 C~w~gv~C~~~----------~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n 122 (947)
|.|+.+.|+.. .+++.|+|++|++.+..|..|.++++|++|+|++|++++..| .|.++++|++|+|++|
T Consensus 33 c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 112 (332)
T 2ft3_A 33 CHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKN 112 (332)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSS
T ss_pred ccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCC
Confidence 78999999642 378999999999998888899999999999999999999877 7999999999999999
Q ss_pred cCCCCCcccccCCCCCcEEeccCCCCCCCCCcccccCCCCCCeEeccCceee--eccCcccCCCCCCCccEEEccCCccc
Q 002255 123 NFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGANIT--GTIPDFLGGDTIPGLMHLHLAFNFLQ 200 (947)
Q Consensus 123 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~--~~~p~~~~~~~l~~L~~L~Ls~N~l~ 200 (947)
+++.+++..+ ++|++|+|++|++.. ..+..+.++++|++|++++|.++ +..|..+. .+ +|++|++++|+++
T Consensus 113 ~l~~l~~~~~---~~L~~L~l~~n~i~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~--~l-~L~~L~l~~n~l~ 185 (332)
T 2ft3_A 113 HLVEIPPNLP---SSLVELRIHDNRIRK-VPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFD--GL-KLNYLRISEAKLT 185 (332)
T ss_dssp CCCSCCSSCC---TTCCEEECCSSCCCC-CCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSC--SC-CCSCCBCCSSBCS
T ss_pred cCCccCcccc---ccCCEEECCCCccCc-cCHhHhCCCccCCEEECCCCccccCCCCccccc--CC-ccCEEECcCCCCC
Confidence 9999888755 899999999999976 45567999999999999999996 46777776 45 9999999999999
Q ss_pred CcCCccccCCCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccCCcCcCCCC-CCCCCCCCCEEEccCCccccCCCcc
Q 002255 201 GPIPLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPLP-DLSGLSSLQDFSVRDNQLTGIVPSS 279 (947)
Q Consensus 201 ~~~p~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~g~~p~~ 279 (947)
+ +|..+. .+|+.|++++|.+...... .+.++++|+.|+|++|++++..+ .+..+++|++|+|++|+++ .+|..
T Consensus 186 ~-l~~~~~-~~L~~L~l~~n~i~~~~~~---~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~ 259 (332)
T 2ft3_A 186 G-IPKDLP-ETLNELHLDHNKIQAIELE---DLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAG 259 (332)
T ss_dssp S-CCSSSC-SSCSCCBCCSSCCCCCCTT---SSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTT
T ss_pred c-cCcccc-CCCCEEECCCCcCCccCHH---HhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChh
Confidence 5 666655 6899999999998876533 46678999999999999999887 4888999999999999999 89999
Q ss_pred ccCCCCCCeEeccCCcccccCCCCCCCcccccccCCCCcccCcCCCcCCCccceeeecccccCChhhhhccCCCCCCCCC
Q 002255 280 LVNLHSLAVVNLTNNLFQGQTPKFNSPVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNS 359 (947)
Q Consensus 280 l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~ 359 (947)
+..+++|+.|+|++|++++..+..+.....
T Consensus 260 l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~-------------------------------------------------- 289 (332)
T 2ft3_A 260 LPDLKLLQVVYLHTNNITKVGVNDFCPVGF-------------------------------------------------- 289 (332)
T ss_dssp GGGCTTCCEEECCSSCCCBCCTTSSSCSSC--------------------------------------------------
T ss_pred hhcCccCCEEECCCCCCCccChhHcccccc--------------------------------------------------
Confidence 999999999999999999766543221110
Q ss_pred CCCCcccCCCCceeEEEecCCCce--eeccccccCCccCCeEeccCCc
Q 002255 360 DWKGVSCDAGGNITVVNLKNLGLS--GTISSNFSRLTSLRQLMLSGNE 405 (947)
Q Consensus 360 ~~~~~~~~~~~~L~~L~Ls~n~l~--g~ip~~~~~l~~L~~L~Ls~N~ 405 (947)
......|+.|++++|.+. +..|..|..+++|+.|+|++|+
T Consensus 290 ------~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 290 ------GVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp ------CSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred ------ccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 011246889999999988 6778899999999999999985
No 293
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.96 E-value=2.4e-29 Score=288.78 Aligned_cols=322 Identities=21% Similarity=0.251 Sum_probs=170.1
Q ss_pred cEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCC-CCCCCC--------------------------------
Q 002255 66 RVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLS-------------------------------- 112 (947)
Q Consensus 66 ~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~-------------------------------- 112 (947)
++++|++++|++ |.+|++|++|++|++|++++|.+.|.+| .+++++
T Consensus 12 ~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~lp~~~ 90 (454)
T 1jl5_A 12 FLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLPELP 90 (454)
T ss_dssp -----------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCCCSCC
T ss_pred cchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccCCCCc
Confidence 556666666666 5666666666666666666666666555 455544
Q ss_pred -CCcEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccE
Q 002255 113 -SLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMH 191 (947)
Q Consensus 113 -~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~ 191 (947)
+|++|++++|++++++. .+++|++|++++|++.+ +|.. .++|++|++++|++++ +| .++ .+++|++
T Consensus 91 ~~L~~L~l~~n~l~~lp~----~~~~L~~L~l~~n~l~~--l~~~---~~~L~~L~L~~n~l~~-lp-~~~--~l~~L~~ 157 (454)
T 1jl5_A 91 PHLESLVASCNSLTELPE----LPQSLKSLLVDNNNLKA--LSDL---PPLLEYLGVSNNQLEK-LP-ELQ--NSSFLKI 157 (454)
T ss_dssp TTCSEEECCSSCCSSCCC----CCTTCCEEECCSSCCSC--CCSC---CTTCCEEECCSSCCSS-CC-CCT--TCTTCCE
T ss_pred CCCCEEEccCCcCCcccc----ccCCCcEEECCCCccCc--ccCC---CCCCCEEECcCCCCCC-Cc-ccC--CCCCCCE
Confidence 44455555555544332 12455555555555543 2221 1578888888888875 66 355 6788888
Q ss_pred EEccCCcccCcCCccccCCCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccCCcCcCCCCCCCCCCCCCEEEccCCc
Q 002255 192 LHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPLPDLSGLSSLQDFSVRDNQ 271 (947)
Q Consensus 192 L~Ls~N~l~~~~p~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~ 271 (947)
|++++|++++ +|..+ .+|++|++++|.+.... .+.++++|+.|++++|++++. |.+ .++|++|++++|+
T Consensus 158 L~l~~N~l~~-lp~~~--~~L~~L~L~~n~l~~l~-----~~~~l~~L~~L~l~~N~l~~l-~~~--~~~L~~L~l~~n~ 226 (454)
T 1jl5_A 158 IDVDNNSLKK-LPDLP--PSLEFIAAGNNQLEELP-----ELQNLPFLTAIYADNNSLKKL-PDL--PLSLESIVAGNNI 226 (454)
T ss_dssp EECCSSCCSC-CCCCC--TTCCEEECCSSCCSSCC-----CCTTCTTCCEEECCSSCCSSC-CCC--CTTCCEEECCSSC
T ss_pred EECCCCcCcc-cCCCc--ccccEEECcCCcCCcCc-----cccCCCCCCEEECCCCcCCcC-CCC--cCcccEEECcCCc
Confidence 8888888875 55544 37888888888776632 366788888888888888863 332 2478888888888
Q ss_pred cccCCCccccCCCCCCeEeccCCcccccCCCCCCCcccccccCCCC-----------cccCcCCCcCCCccceeeecccc
Q 002255 272 LTGIVPSSLVNLHSLAVVNLTNNLFQGQTPKFNSPVRFDMAKGSNS-----------FCLDDAGVACDGRVNVLLSIVKS 340 (947)
Q Consensus 272 l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~ 340 (947)
++ .+|. +..+++|++|++++|++++ +|.....+.. +....|. ..++...+.+.+ +...+
T Consensus 227 l~-~lp~-~~~l~~L~~L~l~~N~l~~-l~~~~~~L~~-L~l~~N~l~~l~~~~~~L~~L~ls~N~l~~----l~~~~-- 296 (454)
T 1jl5_A 227 LE-ELPE-LQNLPFLTTIYADNNLLKT-LPDLPPSLEA-LNVRDNYLTDLPELPQSLTFLDVSENIFSG----LSELP-- 296 (454)
T ss_dssp CS-SCCC-CTTCTTCCEEECCSSCCSS-CCSCCTTCCE-EECCSSCCSCCCCCCTTCCEEECCSSCCSE----ESCCC--
T ss_pred CC-cccc-cCCCCCCCEEECCCCcCCc-ccccccccCE-EECCCCcccccCcccCcCCEEECcCCccCc----ccCcC--
Confidence 87 6674 7788888888888888876 3332211110 0011111 111111111111 00000
Q ss_pred cCChhhhhccCCCCCCCCCCCCCcccCCCCceeEEEecCCCceeeccccccCCccCCeEeccCCcccccCCCcCCCCCCC
Q 002255 341 VGYPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLSGTISSNFSRLTSLRQLMLSGNELTGTIPKELTTLPSL 420 (947)
Q Consensus 341 l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L 420 (947)
..+.......+. +.++ +....+|+.|++++|++++ +|.. +++|+.|+|++|+++ .+|. .+++|
T Consensus 297 ----~~L~~L~l~~N~----l~~i-~~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L 359 (454)
T 1jl5_A 297 ----PNLYYLNASSNE----IRSL-CDLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE---LPQNL 359 (454)
T ss_dssp ----TTCCEEECCSSC----CSEE-CCCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC---CCTTC
T ss_pred ----CcCCEEECcCCc----CCcc-cCCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCccc-cccc---hhhhc
Confidence 111111111111 1111 1122467777777777775 5553 466777777777777 5665 35667
Q ss_pred Cccccccccccc--cCCCCcc
Q 002255 421 EMLDVSNNHLFG--KVPNFRQ 439 (947)
Q Consensus 421 ~~L~ls~N~l~g--~iP~~~~ 439 (947)
++|+|++|+++| .+|....
T Consensus 360 ~~L~L~~N~l~~l~~ip~~l~ 380 (454)
T 1jl5_A 360 KQLHVEYNPLREFPDIPESVE 380 (454)
T ss_dssp CEEECCSSCCSSCCCCCTTCC
T ss_pred cEEECCCCCCCcCCCChHHHH
Confidence 777777777777 6665443
No 294
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.96 E-value=1.1e-28 Score=272.40 Aligned_cols=268 Identities=17% Similarity=0.199 Sum_probs=215.0
Q ss_pred CCCEEEcccCcccCcCCCCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCCcccccCCCCCCeEecc
Q 002255 90 SLTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSAN 169 (947)
Q Consensus 90 ~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~ 169 (947)
+|+.++++++.++..+..+. +.|++|+|++|+++++++..|.++++|++|+|++|++.+ ..|..+.++++|++|+++
T Consensus 32 ~l~~l~~~~~~l~~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 32 HLRVVQCSDLGLEKVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISK-ISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp ETTEEECTTSCCCSCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCC-BCTTTTTTCTTCCEEECC
T ss_pred CCeEEEecCCCccccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCe-eCHHHhcCCCCCCEEECC
Confidence 68899999999986554554 689999999999999999999999999999999999976 568999999999999999
Q ss_pred CceeeeccCcccCCCCCCCccEEEccCCcccCcCCccccC-CCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccCCc
Q 002255 170 GANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGK-SSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNS 248 (947)
Q Consensus 170 ~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~ 248 (947)
+|.++ .+|..+. ++|++|++++|++++..+..+.. .+|+.|++++|.+.... .....+.++++|+.|+|++|.
T Consensus 109 ~n~l~-~l~~~~~----~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~-~~~~~~~~l~~L~~L~l~~n~ 182 (330)
T 1xku_A 109 KNQLK-ELPEKMP----KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSG-IENGAFQGMKKLSYIRIADTN 182 (330)
T ss_dssp SSCCS-BCCSSCC----TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGG-BCTTGGGGCTTCCEEECCSSC
T ss_pred CCcCC-ccChhhc----ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccC-cChhhccCCCCcCEEECCCCc
Confidence 99998 5676653 79999999999999776666654 67888888888775421 122446678888889999888
Q ss_pred CcCCCCCCCCCCCCCEEEccCCccccCCCccccCCCCCCeEeccCCcccccCCCCCCCcccccccCCCCcccCcCCCcCC
Q 002255 249 FTGPLPDLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQTPKFNSPVRFDMAKGSNSFCLDDAGVACD 328 (947)
Q Consensus 249 l~~~~~~~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (947)
++..+..+. ++|++|++++|++++..|..+..+++|+.|+|++|++++..+..+
T Consensus 183 l~~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~------------------------ 236 (330)
T 1xku_A 183 ITTIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSL------------------------ 236 (330)
T ss_dssp CCSCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTG------------------------
T ss_pred cccCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhc------------------------
Confidence 887554443 788888999888888778888888888889988888887655321
Q ss_pred CccceeeecccccCChhhhhccCCCCCCCCCCCCCcccCCCCceeEEEecCCCceeeccccccCCccCCeEeccCCcccc
Q 002255 329 GRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLSGTISSNFSRLTSLRQLMLSGNELTG 408 (947)
Q Consensus 329 ~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g 408 (947)
...++|+.|+|++|.++ .+|..+..+++|++|+|++|+|++
T Consensus 237 --------------------------------------~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~ 277 (330)
T 1xku_A 237 --------------------------------------ANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISA 277 (330)
T ss_dssp --------------------------------------GGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCC
T ss_pred --------------------------------------cCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCc
Confidence 11236888888888888 788888888888888888888885
Q ss_pred cCCCcCCC------CCCCCcccccccccc
Q 002255 409 TIPKELTT------LPSLEMLDVSNNHLF 431 (947)
Q Consensus 409 ~iP~~l~~------l~~L~~L~ls~N~l~ 431 (947)
..+..|+. .+.|+.|++++|++.
T Consensus 278 ~~~~~f~~~~~~~~~~~l~~l~l~~N~~~ 306 (330)
T 1xku_A 278 IGSNDFCPPGYNTKKASYSGVSLFSNPVQ 306 (330)
T ss_dssp CCTTSSSCSSCCTTSCCCSEEECCSSSSC
T ss_pred cChhhcCCcccccccccccceEeecCccc
Confidence 55555654 367788888888875
No 295
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.96 E-value=6.9e-29 Score=287.44 Aligned_cols=301 Identities=24% Similarity=0.348 Sum_probs=239.7
Q ss_pred CcEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCCCCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEecc
Q 002255 65 NRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLD 144 (947)
Q Consensus 65 ~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 144 (947)
.+++.|+|++|.+.+..+ ++++++|++|+|++|.+++..+ +.++++|++|++++|.+++++ .+..+++|++|+++
T Consensus 90 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~l~ 164 (466)
T 1o6v_A 90 TKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP-LKNLTNLNRLELSSNTISDIS--ALSGLTSLQQLSFG 164 (466)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG-GTTCTTCSEEEEEEEEECCCG--GGTTCTTCSEEEEE
T ss_pred ccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH-HcCCCCCCEEECCCCccCCCh--hhccCCcccEeecC
Confidence 579999999999996544 9999999999999999998655 999999999999999999875 38889999999996
Q ss_pred CCCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCcccCcCCccccCCCCceeeeccCCCCC
Q 002255 145 YNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDS 224 (947)
Q Consensus 145 ~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~l~~n~~~~ 224 (947)
|.+.. ++ .+.++++|++|++++|.+++. + .+. .+++|++|++++|++++..| .-...+|+.|++++|.+..
T Consensus 165 -~~~~~--~~-~~~~l~~L~~L~l~~n~l~~~-~-~l~--~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~ 235 (466)
T 1o6v_A 165 -NQVTD--LK-PLANLTTLERLDISSNKVSDI-S-VLA--KLTNLESLIATNNQISDITP-LGILTNLDELSLNGNQLKD 235 (466)
T ss_dssp -ESCCC--CG-GGTTCTTCCEEECCSSCCCCC-G-GGG--GCTTCSEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCC
T ss_pred -CcccC--ch-hhccCCCCCEEECcCCcCCCC-h-hhc--cCCCCCEEEecCCccccccc-ccccCCCCEEECCCCCccc
Confidence 55543 23 388999999999999998754 3 344 68899999999999987665 2223679999999998776
Q ss_pred CCCCchhhhcCCCCCcEEEccCCcCcCCCCCCCCCCCCCEEEccCCccccCCCccccCCCCCCeEeccCCcccccCCCCC
Q 002255 225 KLNGSVAVIQNMTSLTQLWLHGNSFTGPLPDLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQTPKFN 304 (947)
Q Consensus 225 ~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~ 304 (947)
. ..+..+++|+.|+|++|.+++..+ +..+++|+.|++++|++++..+ +..+++|+.|+|++|++++..|
T Consensus 236 ~-----~~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--- 304 (466)
T 1o6v_A 236 I-----GTLASLTNLTDLDLANNQISNLAP-LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--- 304 (466)
T ss_dssp C-----GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG---
T ss_pred c-----hhhhcCCCCCEEECCCCccccchh-hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh---
Confidence 4 346778999999999999988766 8888999999999999986544 8889999999999999887544
Q ss_pred CCcccccccCCCCcccCcCCCcCCCccceeeecccccCChhhhhccCCCCCCCCCCCCCcccCCCCceeEEEecCCCcee
Q 002255 305 SPVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLSG 384 (947)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g 384 (947)
+....+...++...+.+.+.. ....+++|+.|++++|.+++
T Consensus 305 ------~~~l~~L~~L~L~~n~l~~~~---------------------------------~~~~l~~L~~L~l~~n~l~~ 345 (466)
T 1o6v_A 305 ------ISNLKNLTYLTLYFNNISDIS---------------------------------PVSSLTKLQRLFFYNNKVSD 345 (466)
T ss_dssp ------GGGCTTCSEEECCSSCCSCCG---------------------------------GGGGCTTCCEEECCSSCCCC
T ss_pred ------hcCCCCCCEEECcCCcCCCch---------------------------------hhccCccCCEeECCCCccCC
Confidence 112222333333322221110 12245689999999999998
Q ss_pred eccccccCCccCCeEeccCCcccccCCCcCCCCCCCCcccccccccccc
Q 002255 385 TISSNFSRLTSLRQLMLSGNELTGTIPKELTTLPSLEMLDVSNNHLFGK 433 (947)
Q Consensus 385 ~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ls~N~l~g~ 433 (947)
. ..+.++++|+.|+|++|++++.+| +..+++|+.|++++|++++.
T Consensus 346 ~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~~ 390 (466)
T 1o6v_A 346 V--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNA 390 (466)
T ss_dssp C--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEECC
T ss_pred c--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccCC
Confidence 5 579999999999999999998887 89999999999999999984
No 296
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.96 E-value=1.9e-28 Score=295.98 Aligned_cols=333 Identities=19% Similarity=0.200 Sum_probs=232.5
Q ss_pred CcEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEec
Q 002255 65 NRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISL 143 (947)
Q Consensus 65 ~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (947)
.+++.|+|++|+|++..|.+|.+|++|++|+|++|+|++.++ .|.++++|++|+|++|+++++++..|+++++|++|+|
T Consensus 76 ~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~L 155 (635)
T 4g8a_A 76 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 155 (635)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeecc
Confidence 378999999999998778889999999999999999998887 6999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCC----------------------------------------
Q 002255 144 DYNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGG---------------------------------------- 183 (947)
Q Consensus 144 s~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~---------------------------------------- 183 (947)
++|.+....+|..++.+++|++|++++|++++..|..+..
T Consensus 156 s~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n~ 235 (635)
T 4g8a_A 156 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNF 235 (635)
T ss_dssp CSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCC
T ss_pred ccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccccchhhhhhhhhccc
Confidence 9999987678899999999999999999987665443210
Q ss_pred --------------------------------------------------------------------------------
Q 002255 184 -------------------------------------------------------------------------------- 183 (947)
Q Consensus 184 -------------------------------------------------------------------------------- 183 (947)
T Consensus 236 ~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~ 315 (635)
T 4g8a_A 236 DSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVS 315 (635)
T ss_dssp SSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEES
T ss_pred ccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcccccccccc
Confidence
Q ss_pred ---------CCCCCccEEEccCCcccCcCCccc--------------------cCCCCceeeeccCCCCC----------
Q 002255 184 ---------DTIPGLMHLHLAFNFLQGPIPLSF--------------------GKSSIQTLWLNGQKGDS---------- 224 (947)
Q Consensus 184 ---------~~l~~L~~L~Ls~N~l~~~~p~~~--------------------~~~~L~~L~l~~n~~~~---------- 224 (947)
.....|+.|++.+|++.+..+..+ ...+|+.|+++.|.+..
T Consensus 316 ~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~ 395 (635)
T 4g8a_A 316 VTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFG 395 (635)
T ss_dssp CEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHHHHS
T ss_pred cccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccccccccchhhccccccccccccchhh
Confidence 001123444555554433221111 12456777777665421
Q ss_pred ------------CCCCchhhhcCCCCCcEEEccCCcCcCCCC--CCCCCCCCCEEEccCCccccCCCccccCCCCCCeEe
Q 002255 225 ------------KLNGSVAVIQNMTSLTQLWLHGNSFTGPLP--DLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVN 290 (947)
Q Consensus 225 ------------~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~--~~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~ 290 (947)
........+..+++|+.++++.|++....+ .+..+.+++.++++.|.+.+..|..+..+++|+.|+
T Consensus 396 ~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~ 475 (635)
T 4g8a_A 396 TISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLK 475 (635)
T ss_dssp CSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEE
T ss_pred hhhhhhhhccccccccccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhh
Confidence 011111224455666666666666555443 245566666666666666655566666666666666
Q ss_pred ccCCccc-ccCCCCCCCcccccccCCCCcccCcCCCcCCCccceeeecccccCChhhhhccCCCCCCCCCCCCCcccCCC
Q 002255 291 LTNNLFQ-GQTPKFNSPVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAG 369 (947)
Q Consensus 291 Ls~N~l~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 369 (947)
|++|++. +.+|..+..+. +...++...+.+.. . ....+..+
T Consensus 476 Ls~N~~~~~~~~~~~~~l~-------~L~~L~Ls~N~L~~-------l------------------------~~~~f~~l 517 (635)
T 4g8a_A 476 MAGNSFQENFLPDIFTELR-------NLTFLDLSQCQLEQ-------L------------------------SPTAFNSL 517 (635)
T ss_dssp CTTCEEGGGEECSCCTTCT-------TCCEEECTTSCCCE-------E------------------------CTTTTTTC
T ss_pred hhhcccccccCchhhhhcc-------ccCEEECCCCccCC-------c------------------------ChHHHcCC
Confidence 6666533 23333222111 11111111111110 0 00012345
Q ss_pred CceeEEEecCCCceeeccccccCCccCCeEeccCCcccccCCCcCCCC-CCCCccccccccccccCC
Q 002255 370 GNITVVNLKNLGLSGTISSNFSRLTSLRQLMLSGNELTGTIPKELTTL-PSLEMLDVSNNHLFGKVP 435 (947)
Q Consensus 370 ~~L~~L~Ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l-~~L~~L~ls~N~l~g~iP 435 (947)
++|+.|+|++|+|++..|..|.++++|++|||++|+|++..|..+..+ ++|++|+|++|+|++...
T Consensus 518 ~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 518 SSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp TTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred CCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 689999999999999999999999999999999999999999999998 689999999999998765
No 297
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=1.1e-28 Score=291.63 Aligned_cols=285 Identities=21% Similarity=0.270 Sum_probs=237.0
Q ss_pred CCC-CCCCCCCceeEeC------C-CCcEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCCCCCCCCCCcEEe
Q 002255 47 GWT-DPDPCKWKHIQCS------P-SNRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIPSLSGLSSLQEVL 118 (947)
Q Consensus 47 ~w~-~~d~C~w~gv~C~------~-~~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~ 118 (947)
.|. +.+||.|+|..|. + ...++.|++++++++ .+|..+. ++|++|+|++|.|+..++ .+++|++|+
T Consensus 14 ~W~~~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~lp~---~l~~L~~L~ 87 (622)
T 3g06_A 14 AWRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTSLPA---LPPELRTLE 87 (622)
T ss_dssp HHHHTCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSCCCC---CCTTCCEEE
T ss_pred HHHhcCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCCCCC---cCCCCCEEE
Confidence 464 4678999764321 1 235899999999999 8888776 899999999999996444 679999999
Q ss_pred cCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCc
Q 002255 119 FDDNNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNF 198 (947)
Q Consensus 119 L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~ 198 (947)
|++|+|++++. .+++|++|+|++|++.. +|. .+++|+.|++++|++++ +|.. +++|++|+|++|+
T Consensus 88 Ls~N~l~~lp~----~l~~L~~L~Ls~N~l~~--l~~---~l~~L~~L~L~~N~l~~-lp~~-----l~~L~~L~Ls~N~ 152 (622)
T 3g06_A 88 VSGNQLTSLPV----LPPGLLELSIFSNPLTH--LPA---LPSGLCKLWIFGNQLTS-LPVL-----PPGLQELSVSDNQ 152 (622)
T ss_dssp ECSCCCSCCCC----CCTTCCEEEECSCCCCC--CCC---CCTTCCEEECCSSCCSC-CCCC-----CTTCCEEECCSSC
T ss_pred cCCCcCCcCCC----CCCCCCEEECcCCcCCC--CCC---CCCCcCEEECCCCCCCc-CCCC-----CCCCCEEECcCCc
Confidence 99999999886 68999999999999976 555 67899999999999985 5653 4799999999999
Q ss_pred ccCcCCccccCCCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccCCcCcCCCCCCCCCCCCCEEEccCCccccCCCc
Q 002255 199 LQGPIPLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPLPDLSGLSSLQDFSVRDNQLTGIVPS 278 (947)
Q Consensus 199 l~~~~p~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~g~~p~ 278 (947)
+++ +|..+ .+|+.|++++|.+.... ..+++|+.|+|++|+|++.++. +++|+.|++++|.++ .+|.
T Consensus 153 l~~-l~~~~--~~L~~L~L~~N~l~~l~-------~~~~~L~~L~Ls~N~l~~l~~~---~~~L~~L~L~~N~l~-~l~~ 218 (622)
T 3g06_A 153 LAS-LPALP--SELCKLWAYNNQLTSLP-------MLPSGLQELSVSDNQLASLPTL---PSELYKLWAYNNRLT-SLPA 218 (622)
T ss_dssp CSC-CCCCC--TTCCEEECCSSCCSCCC-------CCCTTCCEEECCSSCCSCCCCC---CTTCCEEECCSSCCS-SCCC
T ss_pred CCC-cCCcc--CCCCEEECCCCCCCCCc-------ccCCCCcEEECCCCCCCCCCCc---cchhhEEECcCCccc-ccCC
Confidence 995 45433 57999999999988754 2478999999999999975442 478999999999999 5665
Q ss_pred cccCCCCCCeEeccCCcccccCCCCCCCcccccccCCCCcccCcCCCcCCCccceeeecccccCChhhhhccCCCCCCCC
Q 002255 279 SLVNLHSLAVVNLTNNLFQGQTPKFNSPVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCN 358 (947)
Q Consensus 279 ~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~ 358 (947)
. +++|+.|+|++|+|++ +|.
T Consensus 219 ~---~~~L~~L~Ls~N~L~~-lp~-------------------------------------------------------- 238 (622)
T 3g06_A 219 L---PSGLKELIVSGNRLTS-LPV-------------------------------------------------------- 238 (622)
T ss_dssp C---CTTCCEEECCSSCCSC-CCC--------------------------------------------------------
T ss_pred C---CCCCCEEEccCCccCc-CCC--------------------------------------------------------
Confidence 3 4889999999999986 331
Q ss_pred CCCCCcccCCCCceeEEEecCCCceeeccccccCCccCCeEeccCCcccccCCCcCCCCCCCCccccccccccccCCCCc
Q 002255 359 SDWKGVSCDAGGNITVVNLKNLGLSGTISSNFSRLTSLRQLMLSGNELTGTIPKELTTLPSLEMLDVSNNHLFGKVPNFR 438 (947)
Q Consensus 359 ~~~~~~~~~~~~~L~~L~Ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ls~N~l~g~iP~~~ 438 (947)
.+++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+ .||..+..+++|+.|+|++|+|+|.+|..+
T Consensus 239 ---------~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l 304 (622)
T 3g06_A 239 ---------LPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQAL 304 (622)
T ss_dssp ---------CCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHH
T ss_pred ---------CCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHH
Confidence 1236899999999999 5776 6789999999999999 999999999999999999999999998755
Q ss_pred cc
Q 002255 439 QN 440 (947)
Q Consensus 439 ~~ 440 (947)
..
T Consensus 305 ~~ 306 (622)
T 3g06_A 305 RE 306 (622)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 298
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=5.3e-29 Score=271.72 Aligned_cols=201 Identities=24% Similarity=0.357 Sum_probs=136.9
Q ss_pred CCCceeEeCCCCcEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCcCCCCC--cc
Q 002255 54 CKWKHIQCSPSNRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNFTSVP--SD 130 (947)
Q Consensus 54 C~w~gv~C~~~~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~l~~~~--~~ 130 (947)
|.|.+|.|+. ++++ .+|..+. ++|++|+|++|+++..++ .|.++++|++|+|++|+++.+. +.
T Consensus 7 C~~~~l~c~~-----------~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 72 (306)
T 2z66_A 7 CSGTEIRCNS-----------KGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQ 72 (306)
T ss_dssp EETTEEECCS-----------SCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEH
T ss_pred eCCCEEEcCC-----------CCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCccc
Confidence 6788777753 3444 5666543 688999999998886655 4788888888888888887542 44
Q ss_pred cccCCCCCcEEeccCCCCCCCCCcccccCCCCCCeEeccCceeeeccC-cccCCCCCCCccEEEccCCcccCcCCccccC
Q 002255 131 FFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGANITGTIP-DFLGGDTIPGLMHLHLAFNFLQGPIPLSFGK 209 (947)
Q Consensus 131 ~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p-~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 209 (947)
.+..+++|++|+|++|.+.. +|..+..+++|++|++++|.+++..+ ..+. .+++|++|+|++|++++..+..+.
T Consensus 73 ~~~~~~~L~~L~Ls~n~i~~--l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~--~l~~L~~L~l~~n~l~~~~~~~~~- 147 (306)
T 2z66_A 73 SDFGTTSLKYLDLSFNGVIT--MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFL--SLRNLIYLDISHTHTRVAFNGIFN- 147 (306)
T ss_dssp HHHSCSCCCEEECCSCSEEE--EEEEEETCTTCCEEECTTSEEESSTTTTTTT--TCTTCCEEECTTSCCEECSTTTTT-
T ss_pred ccccccccCEEECCCCcccc--ChhhcCCCCCCCEEECCCCcccccccchhhh--hccCCCEEECCCCcCCccchhhcc-
Confidence 45668888888888888764 66677777777777777777775544 3444 566777777777777655554432
Q ss_pred CCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccCCcCcC-CCC-CCCCCCCCCEEEccCCccccCCCccccCCCCCC
Q 002255 210 SSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTG-PLP-DLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLA 287 (947)
Q Consensus 210 ~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~-~~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~ 287 (947)
++++|+.|+|++|.+++ .+| .+..+++|++|+|++|++++..|..+..+++|+
T Consensus 148 -------------------------~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 202 (306)
T 2z66_A 148 -------------------------GLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQ 202 (306)
T ss_dssp -------------------------TCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred -------------------------cCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCC
Confidence 35666667777766665 233 356666666666666666665566666666666
Q ss_pred eEeccCCcccc
Q 002255 288 VVNLTNNLFQG 298 (947)
Q Consensus 288 ~L~Ls~N~l~g 298 (947)
.|+|++|++++
T Consensus 203 ~L~L~~N~l~~ 213 (306)
T 2z66_A 203 VLNMSHNNFFS 213 (306)
T ss_dssp EEECTTSCCSB
T ss_pred EEECCCCccCc
Confidence 66666666654
No 299
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.96 E-value=5.5e-28 Score=277.65 Aligned_cols=295 Identities=18% Similarity=0.175 Sum_probs=222.4
Q ss_pred cccccCcccccCCCCCCEEEcccCcccCcCCCCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCCcc
Q 002255 76 NIEGTLPKELNSLSSLTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPE 155 (947)
Q Consensus 76 ~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~ 155 (947)
+..+..+..++++++|++|+|++|.+++. |.+..+++|++|+|++|++++++ ++.+++|++|+|++|++.+ ++
T Consensus 29 ~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~~l~~l~~L~~L~Ls~n~l~~~~---~~~l~~L~~L~Ls~N~l~~--~~- 101 (457)
T 3bz5_A 29 EMQATDTISEEQLATLTSLDCHNSSITDM-TGIEKLTGLTKLICTSNNITTLD---LSQNTNLTYLACDSNKLTN--LD- 101 (457)
T ss_dssp TCCTTSEEEHHHHTTCCEEECCSSCCCCC-TTGGGCTTCSEEECCSSCCSCCC---CTTCTTCSEEECCSSCCSC--CC-
T ss_pred CcCcccccChhHcCCCCEEEccCCCcccC-hhhcccCCCCEEEccCCcCCeEc---cccCCCCCEEECcCCCCce--ee-
Confidence 34455566788999999999999999986 68999999999999999999985 8899999999999999976 43
Q ss_pred cccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCcccCcCCcccc-CCCCceeeeccCCCCCCCCCchhhhc
Q 002255 156 SLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFG-KSSIQTLWLNGQKGDSKLNGSVAVIQ 234 (947)
Q Consensus 156 ~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~~~L~~L~l~~n~~~~~~~~~~~~~~ 234 (947)
++++++|++|++++|++++ +| ++ .+++|++|+|++|++++. + ++ ..+|+.|++++|...... .+.
T Consensus 102 -~~~l~~L~~L~L~~N~l~~-l~--~~--~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~-----~~~ 167 (457)
T 3bz5_A 102 -VTPLTKLTYLNCDTNKLTK-LD--VS--QNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL-----DVT 167 (457)
T ss_dssp -CTTCTTCCEEECCSSCCSC-CC--CT--TCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC-----CCT
T ss_pred -cCCCCcCCEEECCCCcCCe-ec--CC--CCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc-----ccc
Confidence 8999999999999999997 44 55 789999999999999974 3 43 378999999999544333 256
Q ss_pred CCCCCcEEEccCCcCcCCCCCCCCCCCCCEEEccCCccccCCCccccCCCCCCeEeccCCcccccCCCCCCCcccccccC
Q 002255 235 NMTSLTQLWLHGNSFTGPLPDLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQTPKFNSPVRFDMAKG 314 (947)
Q Consensus 235 ~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~~ 314 (947)
.+++|+.|+|++|++++. | +..+++|+.|++++|++++. .++.+++|+.|+|++|++++ +| +. ..
T Consensus 168 ~l~~L~~L~ls~n~l~~l-~-l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~-------~l 232 (457)
T 3bz5_A 168 PQTQLTTLDCSFNKITEL-D-VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VT-------PL 232 (457)
T ss_dssp TCTTCCEEECCSSCCCCC-C-CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CT-------TC
T ss_pred cCCcCCEEECCCCcccee-c-cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--cc-------cc
Confidence 789999999999999985 3 88899999999999999975 48999999999999999998 44 11 11
Q ss_pred CCCcccCcCCCcCCCccceeeecccccCChhhhhccCCCCCCCCCCCCCcccCCCCceeEEEecCCCceeeccccccCCc
Q 002255 315 SNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLSGTISSNFSRLT 394 (947)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g~ip~~~~~l~ 394 (947)
.+...++...+.+.+.. +..+. . +..+.+ ...+|+.|++++|.+.|.+| ++.++
T Consensus 233 ~~L~~L~l~~N~l~~~~------~~~l~---~--------------L~~L~l-~~n~L~~L~l~~n~~~~~~~--~~~l~ 286 (457)
T 3bz5_A 233 TQLTYFDCSVNPLTELD------VSTLS---K--------------LTTLHC-IQTDLLEIDLTHNTQLIYFQ--AEGCR 286 (457)
T ss_dssp TTCSEEECCSSCCSCCC------CTTCT---T--------------CCEEEC-TTCCCSCCCCTTCTTCCEEE--CTTCT
T ss_pred CCCCEEEeeCCcCCCcC------HHHCC---C--------------CCEEec-cCCCCCEEECCCCccCCccc--ccccc
Confidence 22222222222222110 00000 0 000000 01246677777777777777 46778
Q ss_pred cCCeEeccCCcccccCCCc--------CCCCCCCCccccccccccc
Q 002255 395 SLRQLMLSGNELTGTIPKE--------LTTLPSLEMLDVSNNHLFG 432 (947)
Q Consensus 395 ~L~~L~Ls~N~l~g~iP~~--------l~~l~~L~~L~ls~N~l~g 432 (947)
+|+.|+|++|++.|.+|.. +..+++|+.|++++|+|+|
T Consensus 287 ~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~ 332 (457)
T 3bz5_A 287 KIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTE 332 (457)
T ss_dssp TCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSC
T ss_pred cCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCcccc
Confidence 8888888888877777653 4445677777888888877
No 300
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=8.1e-28 Score=277.33 Aligned_cols=249 Identities=21% Similarity=0.247 Sum_probs=194.1
Q ss_pred EEEecCCcccccCcccccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEeccCCC
Q 002255 69 RIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNS 147 (947)
Q Consensus 69 ~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 147 (947)
.+++.+.+++ .+|..+. ++|++|+|++|++++..| .|.++++|++|+|++|+++++++..|.++++|++|+|++|+
T Consensus 58 ~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~ 134 (452)
T 3zyi_A 58 KVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNW 134 (452)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCc
Confidence 4555666676 6777665 689999999999999877 79999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCcccCcCCccccCCCCceeeeccCCCCCCCC
Q 002255 148 FDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDSKLN 227 (947)
Q Consensus 148 l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~l~~n~~~~~~~ 227 (947)
+.. ..+..+..+++|++|+|++|.++...+..|. .+++|++|+|++|+..+.++...
T Consensus 135 l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~l~~~~~l~~i~~~~-------------------- 191 (452)
T 3zyi_A 135 LTV-IPSGAFEYLSKLRELWLRNNPIESIPSYAFN--RVPSLMRLDLGELKKLEYISEGA-------------------- 191 (452)
T ss_dssp CSB-CCTTTSSSCTTCCEEECCSCCCCEECTTTTT--TCTTCCEEECCCCTTCCEECTTT--------------------
T ss_pred CCc-cChhhhcccCCCCEEECCCCCcceeCHhHHh--cCCcccEEeCCCCCCccccChhh--------------------
Confidence 975 4556688899999999999999876666776 68899999998855444554321
Q ss_pred CchhhhcCCCCCcEEEccCCcCcCCCCCCCCCCCCCEEEccCCccccCCCccccCCCCCCeEeccCCcccccCCCCCCCc
Q 002255 228 GSVAVIQNMTSLTQLWLHGNSFTGPLPDLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQTPKFNSPV 307 (947)
Q Consensus 228 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~ 307 (947)
+.++++|+.|+|++|++++. |.+..+++|+.|+|++|+|++..|..|.++++|+.|+|++|++++..
T Consensus 192 -----~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~------- 258 (452)
T 3zyi_A 192 -----FEGLFNLKYLNLGMCNIKDM-PNLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIE------- 258 (452)
T ss_dssp -----TTTCTTCCEEECTTSCCSSC-CCCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEEC-------
T ss_pred -----ccCCCCCCEEECCCCccccc-ccccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceEC-------
Confidence 33578888888888888864 66778888888888888888877888888888888888877776443
Q ss_pred ccccccCCCCcccCcCCCcCCCccceeeecccccCChhhhhccCCCCCCCCCCCCCcccCCCCceeEEEecCCCceeecc
Q 002255 308 RFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLSGTIS 387 (947)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g~ip 387 (947)
|
T Consensus 259 -------------------------------------------------------------------------------~ 259 (452)
T 3zyi_A 259 -------------------------------------------------------------------------------R 259 (452)
T ss_dssp -------------------------------------------------------------------------------T
T ss_pred -------------------------------------------------------------------------------H
Confidence 3
Q ss_pred ccccCCccCCeEeccCCcccccCCCcCCCCCCCCccccccccccccCC
Q 002255 388 SNFSRLTSLRQLMLSGNELTGTIPKELTTLPSLEMLDVSNNHLFGKVP 435 (947)
Q Consensus 388 ~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ls~N~l~g~iP 435 (947)
..|.++++|+.|+|++|+|++..+..+..+++|+.|+|++|++.+...
T Consensus 260 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 260 NAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTT
T ss_pred HHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCC
Confidence 445566777777777777775555556677777777777777765543
No 301
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=1.2e-27 Score=275.02 Aligned_cols=249 Identities=20% Similarity=0.257 Sum_probs=189.8
Q ss_pred EEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEeccCC
Q 002255 68 TRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYN 146 (947)
Q Consensus 68 ~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N 146 (947)
..+++.+.+++ .+|..+. ++|+.|+|++|++++..+ .|.++++|++|+|++|+++.+++..|.++++|++|+|++|
T Consensus 46 ~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n 122 (440)
T 3zyj_A 46 SKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDN 122 (440)
T ss_dssp CEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCC
Confidence 45666777777 7887765 789999999999998887 7999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCcccCcCCccccCCCCceeeeccCCCCCCC
Q 002255 147 SFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDSKL 226 (947)
Q Consensus 147 ~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~l~~n~~~~~~ 226 (947)
++.. ..+..+..+++|++|+|++|.++...+..|. .+++|++|+|++|+..+.++...
T Consensus 123 ~l~~-~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~--~l~~L~~L~l~~~~~l~~i~~~~------------------- 180 (440)
T 3zyj_A 123 RLTT-IPNGAFVYLSKLKELWLRNNPIESIPSYAFN--RIPSLRRLDLGELKRLSYISEGA------------------- 180 (440)
T ss_dssp CCSS-CCTTTSCSCSSCCEEECCSCCCCEECTTTTT--TCTTCCEEECCCCTTCCEECTTT-------------------
T ss_pred cCCe-eCHhHhhccccCceeeCCCCcccccCHHHhh--hCcccCEeCCCCCCCcceeCcch-------------------
Confidence 9975 4455788888999999999888876666676 67888888888855444444321
Q ss_pred CCchhhhcCCCCCcEEEccCCcCcCCCCCCCCCCCCCEEEccCCccccCCCccccCCCCCCeEeccCCcccccCCCCCCC
Q 002255 227 NGSVAVIQNMTSLTQLWLHGNSFTGPLPDLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQTPKFNSP 306 (947)
Q Consensus 227 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~ 306 (947)
+.++++|+.|+|++|+++. +|.+..+++|+.|+|++|+|++..|..|.++++|+.|+|++|++++
T Consensus 181 ------~~~l~~L~~L~L~~n~l~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~-------- 245 (440)
T 3zyj_A 181 ------FEGLSNLRYLNLAMCNLRE-IPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQV-------- 245 (440)
T ss_dssp ------TTTCSSCCEEECTTSCCSS-CCCCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCE--------
T ss_pred ------hhcccccCeecCCCCcCcc-ccccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeE--------
Confidence 3357778888888888873 4567777777777777777777667777777777777777776654
Q ss_pred cccccccCCCCcccCcCCCcCCCccceeeecccccCChhhhhccCCCCCCCCCCCCCcccCCCCceeEEEecCCCceeec
Q 002255 307 VRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLSGTI 386 (947)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g~i 386 (947)
..
T Consensus 246 ------------------------------------------------------------------------------~~ 247 (440)
T 3zyj_A 246 ------------------------------------------------------------------------------IE 247 (440)
T ss_dssp ------------------------------------------------------------------------------EC
T ss_pred ------------------------------------------------------------------------------EC
Confidence 33
Q ss_pred cccccCCccCCeEeccCCcccccCCCcCCCCCCCCccccccccccccC
Q 002255 387 SSNFSRLTSLRQLMLSGNELTGTIPKELTTLPSLEMLDVSNNHLFGKV 434 (947)
Q Consensus 387 p~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ls~N~l~g~i 434 (947)
|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|++.+..
T Consensus 248 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC 295 (440)
T 3zyj_A 248 RNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNC 295 (440)
T ss_dssp TTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSS
T ss_pred hhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCC
Confidence 445666677777777777777555555677777777777777776543
No 302
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=1.8e-27 Score=259.50 Aligned_cols=251 Identities=20% Similarity=0.255 Sum_probs=217.7
Q ss_pred CEEEcccCcccCcCCCCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCC-CCCcccccCCCCCCeEeccC
Q 002255 92 TVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDS-WVIPESLKDATGLQRFSANG 170 (947)
Q Consensus 92 ~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~p~~~~~l~~L~~L~l~~ 170 (947)
+.++++++.++..+..+. ++|++|+|++|+++.+++..|..+++|++|+|++|++.. +..+..+..+++|++|++++
T Consensus 10 ~~l~c~~~~l~~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~ 87 (306)
T 2z66_A 10 TEIRCNSKGLTSVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSF 87 (306)
T ss_dssp TEEECCSSCCSSCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCS
T ss_pred CEEEcCCCCcccCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCC
Confidence 578999999886655443 689999999999999999999999999999999999964 12367788899999999999
Q ss_pred ceeeeccCcccCCCCCCCccEEEccCCcccCcCC-ccccCCCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccCCcC
Q 002255 171 ANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIP-LSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSF 249 (947)
Q Consensus 171 n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l 249 (947)
|.++. +|..+. .+++|++|+|++|++++..+ .. +.++++|+.|+|++|.+
T Consensus 88 n~i~~-l~~~~~--~l~~L~~L~l~~n~l~~~~~~~~--------------------------~~~l~~L~~L~l~~n~l 138 (306)
T 2z66_A 88 NGVIT-MSSNFL--GLEQLEHLDFQHSNLKQMSEFSV--------------------------FLSLRNLIYLDISHTHT 138 (306)
T ss_dssp CSEEE-EEEEEE--TCTTCCEEECTTSEEESSTTTTT--------------------------TTTCTTCCEEECTTSCC
T ss_pred Ccccc-ChhhcC--CCCCCCEEECCCCcccccccchh--------------------------hhhccCCCEEECCCCcC
Confidence 99984 666676 68999999999999986544 22 34589999999999999
Q ss_pred cCCCCC-CCCCCCCCEEEccCCcccc-CCCccccCCCCCCeEeccCCcccccCCCCCCCcccccccCCCCcccCcCCCcC
Q 002255 250 TGPLPD-LSGLSSLQDFSVRDNQLTG-IVPSSLVNLHSLAVVNLTNNLFQGQTPKFNSPVRFDMAKGSNSFCLDDAGVAC 327 (947)
Q Consensus 250 ~~~~~~-~~~l~~L~~L~l~~N~l~g-~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (947)
++.++. +.++++|++|++++|.+++ .+|..+..+++|++|+|++|++++..|..+.
T Consensus 139 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~---------------------- 196 (306)
T 2z66_A 139 RVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFN---------------------- 196 (306)
T ss_dssp EECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTT----------------------
T ss_pred CccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhc----------------------
Confidence 988875 7889999999999999997 6899999999999999999999987665321
Q ss_pred CCccceeeecccccCChhhhhccCCCCCCCCCCCCCcccCCCCceeEEEecCCCceeeccccccCCccCCeEeccCCccc
Q 002255 328 DGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLSGTISSNFSRLTSLRQLMLSGNELT 407 (947)
Q Consensus 328 ~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~ 407 (947)
..++|+.|+|++|.+++..+..+..+++|+.|+|++|+++
T Consensus 197 ----------------------------------------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 236 (306)
T 2z66_A 197 ----------------------------------------SLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIM 236 (306)
T ss_dssp ----------------------------------------TCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCC
T ss_pred ----------------------------------------CCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCc
Confidence 2347999999999999888888999999999999999999
Q ss_pred ccCCCcCCCCC-CCCccccccccccccCC
Q 002255 408 GTIPKELTTLP-SLEMLDVSNNHLFGKVP 435 (947)
Q Consensus 408 g~iP~~l~~l~-~L~~L~ls~N~l~g~iP 435 (947)
+.+|..+..++ +|++|+|++|+|++..+
T Consensus 237 ~~~~~~~~~~~~~L~~L~L~~N~~~~~c~ 265 (306)
T 2z66_A 237 TSKKQELQHFPSSLAFLNLTQNDFACTCE 265 (306)
T ss_dssp BCSSSSCCCCCTTCCEEECTTCCEECSGG
T ss_pred ccCHHHHHhhhccCCEEEccCCCeecccC
Confidence 99999999995 99999999999998754
No 303
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=6.9e-29 Score=291.58 Aligned_cols=188 Identities=20% Similarity=0.170 Sum_probs=131.9
Q ss_pred eecccCceEEEEEE-EcCCcEEEEEEeccccc--------ChHHHHHHHHHHHHHHcC-CCCCcceEEEEEEeCCeeEEE
Q 002255 597 VLGRGGFGTVYKGE-LHDGTKIAVKRMESAVV--------SEKGFAEFKSEIAVLTKV-RHRHLVGLLGYCLDGNERLLV 666 (947)
Q Consensus 597 ~lg~G~~g~Vy~~~-~~~g~~vavK~~~~~~~--------~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV 666 (947)
..+.|++|.+..++ .-.|+.||||++..... .+...++|.+|+++|+++ .|+||+++++++++++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 45667777766653 34589999999976421 123456799999999999 799999999999999999999
Q ss_pred EEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceec
Q 002255 667 YEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 746 (947)
Q Consensus 667 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~ 746 (947)
|||++|++|.+++.... +++.. +|+.||+.||+|+|+ +|||||||||+|||++++|.+||+|||+|+..
T Consensus 321 MEyv~G~~L~d~i~~~~-----~l~~~---~I~~QIl~AL~ylH~---~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~ 389 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGE-----EIDRE---KILGSLLRSLAALEK---QGFWHDDVRPWNVMVDARQHARLIDFGSIVTT 389 (569)
T ss_dssp EECCCSEEHHHHHHTTC-----CCCHH---HHHHHHHHHHHHHHH---TTCEESCCCGGGEEECTTSCEEECCCTTEESC
T ss_pred EecCCCCcHHHHHHhCC-----CCCHH---HHHHHHHHHHHHHHH---CCceeccCchHhEEECCCCCEEEeecccCeeC
Confidence 99999999999996532 34443 589999999999997 89999999999999999999999999999876
Q ss_pred CCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCC
Q 002255 747 PDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKAL 798 (947)
Q Consensus 747 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~ 798 (947)
..... .....+||++|||||++.+ .+..++|+||+|++++++.++..++
T Consensus 390 ~~~~~--~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 390 PQDCS--WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp C---C--CSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred CCCCc--cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 54322 2344689999999998864 5778899999999988887665443
No 304
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=5.4e-30 Score=297.10 Aligned_cols=224 Identities=18% Similarity=0.225 Sum_probs=166.6
Q ss_pred CCCCCcEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCc
Q 002255 110 GLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGL 189 (947)
Q Consensus 110 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L 189 (947)
.+++|++|+|++|.++++++..|..+++|++|+|++|.+.+ ..| +..+++|++|+|++|.|++..+ .++|
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~--l~~l~~L~~L~Ls~N~l~~l~~-------~~~L 101 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYE-TLD--LESLSTLRTLDLNNNYVQELLV-------GPSI 101 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEE-EEE--CTTCTTCCEEECCSSEEEEEEE-------CTTC
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCC-Ccc--cccCCCCCEEEecCCcCCCCCC-------CCCc
Confidence 34467777777777777766667777777777777777754 222 6777777777777777765432 3678
Q ss_pred cEEEccCCcccCcCCccccCCCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccCCcCcCCCC-CCCCCCCCCEEEcc
Q 002255 190 MHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPLP-DLSGLSSLQDFSVR 268 (947)
Q Consensus 190 ~~L~Ls~N~l~~~~p~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~l~ 268 (947)
++|+|++|.+++..+. .+++|+.|+|++|.+++.+| .+..+++|++|+|+
T Consensus 102 ~~L~L~~N~l~~~~~~-----------------------------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 152 (487)
T 3oja_A 102 ETLHAANNNISRVSCS-----------------------------RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLK 152 (487)
T ss_dssp CEEECCSSCCCCEEEC-----------------------------CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECT
T ss_pred CEEECcCCcCCCCCcc-----------------------------ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECC
Confidence 8888888888754432 24678888888888888766 47778888888888
Q ss_pred CCccccCCCcccc-CCCCCCeEeccCCcccccCCCCCCCcccccccCCCCcccCcCCCcCCCccceeeecccccCChhhh
Q 002255 269 DNQLTGIVPSSLV-NLHSLAVVNLTNNLFQGQTPKFNSPVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVL 347 (947)
Q Consensus 269 ~N~l~g~~p~~l~-~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l 347 (947)
+|.|++.+|..+. .+++|+.|+|++|.+++..+..
T Consensus 153 ~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~~~-------------------------------------------- 188 (487)
T 3oja_A 153 LNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQV-------------------------------------------- 188 (487)
T ss_dssp TSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCC--------------------------------------------
T ss_pred CCCCCCcChHHHhhhCCcccEEecCCCccccccccc--------------------------------------------
Confidence 8888888888776 7888999999998888653210
Q ss_pred hccCCCCCCCCCCCCCcccCCCCceeEEEecCCCceeeccccccCCccCCeEeccCCcccccCCCcCCCCCCCCcccccc
Q 002255 348 AESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLSGTISSNFSRLTSLRQLMLSGNELTGTIPKELTTLPSLEMLDVSN 427 (947)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ls~ 427 (947)
.+++|+.|+|++|.|++. |+.++.+++|+.|+|++|+|+ .+|..+..+++|+.|+|++
T Consensus 189 --------------------~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~l~~ 246 (487)
T 3oja_A 189 --------------------VFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRG 246 (487)
T ss_dssp --------------------CCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTT
T ss_pred --------------------cCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCc-ccchhhccCCCCCEEEcCC
Confidence 134688899999999874 445888999999999999999 4888899999999999999
Q ss_pred cccc-ccCCCCc
Q 002255 428 NHLF-GKVPNFR 438 (947)
Q Consensus 428 N~l~-g~iP~~~ 438 (947)
|++. +.+|.+.
T Consensus 247 N~l~c~~~~~~~ 258 (487)
T 3oja_A 247 NGFHCGTLRDFF 258 (487)
T ss_dssp CCBCHHHHHHHH
T ss_pred CCCcCcchHHHH
Confidence 9987 6666543
No 305
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=2.9e-27 Score=255.09 Aligned_cols=208 Identities=20% Similarity=0.305 Sum_probs=157.4
Q ss_pred eeEeCCCCcEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCcCCCCCcccccCCC
Q 002255 58 HIQCSPSNRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNFTSVPSDFFKGLT 136 (947)
Q Consensus 58 gv~C~~~~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 136 (947)
+..|... ..+.+++++++++ .+|..+ .++|++|+|++|.+++.++ .|.++++|++|+|++|.++++.+..|..++
T Consensus 5 ~C~C~~~-~~~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~ 80 (285)
T 1ozn_A 5 ACVCYNE-PKVTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLA 80 (285)
T ss_dssp TCEEECS-SSCEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCT
T ss_pred CceECCC-CCeEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCcc
Confidence 3456433 2367888888888 667654 4799999999999998877 689999999999999999999888899999
Q ss_pred CCcEEeccCCC-CCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCcccCcCCccccCCCCcee
Q 002255 137 SLQTISLDYNS-FDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTL 215 (947)
Q Consensus 137 ~L~~L~Ls~N~-l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L 215 (947)
+|++|+|++|+ +.. ..|..+..+++|++|++++|.+++..|..+. .+++|++|+|++|++++..+..+.
T Consensus 81 ~L~~L~l~~n~~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~--~l~~L~~L~l~~n~l~~~~~~~~~------- 150 (285)
T 1ozn_A 81 LLEQLDLSDNAQLRS-VDPATFHGLGRLHTLHLDRCGLQELGPGLFR--GLAALQYLYLQDNALQALPDDTFR------- 150 (285)
T ss_dssp TCCEEECCSCTTCCC-CCTTTTTTCTTCCEEECTTSCCCCCCTTTTT--TCTTCCEEECCSSCCCCCCTTTTT-------
T ss_pred CCCEEeCCCCCCccc-cCHHHhcCCcCCCEEECCCCcCCEECHhHhh--CCcCCCEEECCCCcccccCHhHhc-------
Confidence 99999999997 654 4577888888888888888888877777776 678888888888888755544443
Q ss_pred eeccCCCCCCCCCchhhhcCCCCCcEEEccCCcCcCCCCC-CCCCCCCCEEEccCCccccCCCccccCCCCCCeEeccCC
Q 002255 216 WLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPLPD-LSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNN 294 (947)
Q Consensus 216 ~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N 294 (947)
++++|+.|+|++|++++.++. +..+++|++|+|++|++++..|..+.++++|+.|+|++|
T Consensus 151 -------------------~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 211 (285)
T 1ozn_A 151 -------------------DLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFAN 211 (285)
T ss_dssp -------------------TCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred -------------------cCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCC
Confidence 356667777777766665553 566666666777666666666666666666666666666
Q ss_pred cccc
Q 002255 295 LFQG 298 (947)
Q Consensus 295 ~l~g 298 (947)
++++
T Consensus 212 ~l~~ 215 (285)
T 1ozn_A 212 NLSA 215 (285)
T ss_dssp CCSC
T ss_pred cCCc
Confidence 6654
No 306
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=3.1e-29 Score=274.04 Aligned_cols=249 Identities=19% Similarity=0.228 Sum_probs=170.2
Q ss_pred ccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCcCCC-CCccccc-------CCCCCcEEeccCCCCCCCCCcc
Q 002255 85 LNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNFTS-VPSDFFK-------GLTSLQTISLDYNSFDSWVIPE 155 (947)
Q Consensus 85 l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~l~~-~~~~~~~-------~l~~L~~L~Ls~N~l~~~~~p~ 155 (947)
++.+++|+.|++++|.+ .+| .+... |++|+|++|.++. ..+..+. ++++|++|+|++|++.+ .+|.
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~ 113 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTG-TAPP 113 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBS-CCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccc-hhHH
Confidence 44556677777777776 444 33332 6666666666642 2222232 46667777777776654 4555
Q ss_pred cc--cCCCCCCeEeccCceeeeccCcccCCCCC-----CCccEEEccCCcccCcCCccccCCCCceeeeccCCCCCCCCC
Q 002255 156 SL--KDATGLQRFSANGANITGTIPDFLGGDTI-----PGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDSKLNG 228 (947)
Q Consensus 156 ~~--~~l~~L~~L~l~~n~l~~~~p~~~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~l~~n~~~~~~~~ 228 (947)
.+ ..+++|++|+|++|.+++. |..++ .+ ++|++|+|++|++++..|..++
T Consensus 114 ~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~--~l~~~~~~~L~~L~L~~N~l~~~~~~~~~-------------------- 170 (312)
T 1wwl_A 114 PLLEATGPDLNILNLRNVSWATR-DAWLA--ELQQWLKPGLKVLSIAQAHSLNFSCEQVR-------------------- 170 (312)
T ss_dssp CSSSCCSCCCSEEEEESCBCSSS-SSHHH--HHHTTCCTTCCEEEEESCSCCCCCTTTCC--------------------
T ss_pred HHHHhcCCCccEEEccCCCCcch-hHHHH--HHHHhhcCCCcEEEeeCCCCccchHHHhc--------------------
Confidence 54 6666677777777666655 55444 33 6777777777777665555543
Q ss_pred chhhhcCCCCCcEEEccCCcCcCC---CCCC--CCCCCCCEEEccCCcccc--CCC-ccccCCCCCCeEeccCCcccccC
Q 002255 229 SVAVIQNMTSLTQLWLHGNSFTGP---LPDL--SGLSSLQDFSVRDNQLTG--IVP-SSLVNLHSLAVVNLTNNLFQGQT 300 (947)
Q Consensus 229 ~~~~~~~l~~L~~L~L~~N~l~~~---~~~~--~~l~~L~~L~l~~N~l~g--~~p-~~l~~l~~L~~L~Ls~N~l~g~~ 300 (947)
++++|++|+|++|++.+. ++.+ ..+++|++|+|++|+|++ .++ ..+.++++|++|+|++|++++.+
T Consensus 171 ------~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 244 (312)
T 1wwl_A 171 ------VFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAA 244 (312)
T ss_dssp ------CCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSC
T ss_pred ------cCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCccc
Confidence 478888888888887764 2233 678888888888888883 223 33467888999999999888766
Q ss_pred CCCCCCcccccccCCCCcccCcCCCcCCCccceeeecccccCChhhhhccCCCCCCCCCCCCCcccCCCCceeEEEecCC
Q 002255 301 PKFNSPVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKNL 380 (947)
Q Consensus 301 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n 380 (947)
|.. .+....+|+.|+|++|
T Consensus 245 ~~~-------------------------------------------------------------~~~~l~~L~~L~Ls~N 263 (312)
T 1wwl_A 245 GAP-------------------------------------------------------------SCDWPSQLNSLNLSFT 263 (312)
T ss_dssp CCS-------------------------------------------------------------CCCCCTTCCEEECTTS
T ss_pred chh-------------------------------------------------------------hhhhcCCCCEEECCCC
Confidence 421 0112346888999999
Q ss_pred CceeeccccccCCccCCeEeccCCcccccCCCcCCCCCCCCcccccccccccc
Q 002255 381 GLSGTISSNFSRLTSLRQLMLSGNELTGTIPKELTTLPSLEMLDVSNNHLFGK 433 (947)
Q Consensus 381 ~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ls~N~l~g~ 433 (947)
+|+ .+|..+. ++|+.|||++|+|++. |. +..+++|++|+|++|+|++.
T Consensus 264 ~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~~ 311 (312)
T 1wwl_A 264 GLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLDS 311 (312)
T ss_dssp CCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTCC
T ss_pred ccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCCC
Confidence 988 7888777 8899999999999954 76 88999999999999998764
No 307
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.95 E-value=3.2e-26 Score=262.68 Aligned_cols=312 Identities=22% Similarity=0.279 Sum_probs=197.0
Q ss_pred CcEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCCCCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEecc
Q 002255 65 NRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLD 144 (947)
Q Consensus 65 ~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 144 (947)
.+++.|++++|.+++ +|.. +++|++|++++|++++.. .+ .++|++|++++|++++++ .|.++++|++|+++
T Consensus 91 ~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l~-~~--~~~L~~L~L~~n~l~~lp--~~~~l~~L~~L~l~ 161 (454)
T 1jl5_A 91 PHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKALS-DL--PPLLEYLGVSNNQLEKLP--ELQNSSFLKIIDVD 161 (454)
T ss_dssp TTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCCC-SC--CTTCCEEECCSSCCSSCC--CCTTCTTCCEEECC
T ss_pred CCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCccc-CC--CCCCCEEECcCCCCCCCc--ccCCCCCCCEEECC
Confidence 467788888888876 6643 367888888888877632 22 167888888888888865 37888888888888
Q ss_pred CCCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCcccCcCCccccCCCCceeeeccCCCCC
Q 002255 145 YNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDS 224 (947)
Q Consensus 145 ~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~l~~n~~~~ 224 (947)
+|++.+ +|..+ .+|++|++++|++++ +| .++ .+++|++|++++|++++ +|... .+|+.|++++|.+..
T Consensus 162 ~N~l~~--lp~~~---~~L~~L~L~~n~l~~-l~-~~~--~l~~L~~L~l~~N~l~~-l~~~~--~~L~~L~l~~n~l~~ 229 (454)
T 1jl5_A 162 NNSLKK--LPDLP---PSLEFIAAGNNQLEE-LP-ELQ--NLPFLTAIYADNNSLKK-LPDLP--LSLESIVAGNNILEE 229 (454)
T ss_dssp SSCCSC--CCCCC---TTCCEEECCSSCCSS-CC-CCT--TCTTCCEEECCSSCCSS-CCCCC--TTCCEEECCSSCCSS
T ss_pred CCcCcc--cCCCc---ccccEEECcCCcCCc-Cc-ccc--CCCCCCEEECCCCcCCc-CCCCc--CcccEEECcCCcCCc
Confidence 888864 55443 478888888888886 56 455 68888888888888885 44433 478888888887773
Q ss_pred CCCCchhhhcCCCCCcEEEccCCcCcCCCCCCCCCCCCCEEEccCCccccCCCccccCCCCCCeEeccCCcccc--cCCC
Q 002255 225 KLNGSVAVIQNMTSLTQLWLHGNSFTGPLPDLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQG--QTPK 302 (947)
Q Consensus 225 ~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g--~~p~ 302 (947)
.. .+.++++|+.|++++|++++.++ .+++|++|++++|++++ +|.. +++|+.|++++|++++ .+|.
T Consensus 230 lp-----~~~~l~~L~~L~l~~N~l~~l~~---~~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l~~~~~ 297 (454)
T 1jl5_A 230 LP-----ELQNLPFLTTIYADNNLLKTLPD---LPPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGLSELPP 297 (454)
T ss_dssp CC-----CCTTCTTCCEEECCSSCCSSCCS---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEESCCCT
T ss_pred cc-----ccCCCCCCCEEECCCCcCCcccc---cccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcccCcCC
Confidence 32 25678888888888888886433 24788888888888885 5654 3778888888888887 2332
Q ss_pred CCCCcccccccCCCCcccCcCCCcCCCccceeeecccccCChhhhhccCCCCCCCCCCCCCcccCCCCceeEEEecCCCc
Q 002255 303 FNSPVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGL 382 (947)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l 382 (947)
. ...++...+.+.+ +...+. .+.......+. +.++ ...+.+|+.|++++|++
T Consensus 298 ~-------------L~~L~l~~N~l~~----i~~~~~------~L~~L~Ls~N~----l~~l-p~~~~~L~~L~L~~N~l 349 (454)
T 1jl5_A 298 N-------------LYYLNASSNEIRS----LCDLPP------SLEELNVSNNK----LIEL-PALPPRLERLIASFNHL 349 (454)
T ss_dssp T-------------CCEEECCSSCCSE----ECCCCT------TCCEEECCSSC----CSCC-CCCCTTCCEEECCSSCC
T ss_pred c-------------CCEEECcCCcCCc----ccCCcC------cCCEEECCCCc----cccc-cccCCcCCEEECCCCcc
Confidence 1 1112222222111 000111 11112221211 1121 12257899999999999
Q ss_pred eeeccccccCCccCCeEeccCCcccc--cCCCcCCCC-------------CCCCccccccccccc--cCCCCccce
Q 002255 383 SGTISSNFSRLTSLRQLMLSGNELTG--TIPKELTTL-------------PSLEMLDVSNNHLFG--KVPNFRQNV 441 (947)
Q Consensus 383 ~g~ip~~~~~l~~L~~L~Ls~N~l~g--~iP~~l~~l-------------~~L~~L~ls~N~l~g--~iP~~~~~~ 441 (947)
+ .+|. .+++|+.|+|++|+++| .+|.++..+ ++|+.||+++|+++| .||......
T Consensus 350 ~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L~~n~~~~~i~~~~~~L~~L~ls~N~l~~~~~iP~sl~~L 421 (454)
T 1jl5_A 350 A-EVPE---LPQNLKQLHVEYNPLREFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLREFPDIPESVEDL 421 (454)
T ss_dssp S-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCEEECCC-----------------------------------
T ss_pred c-cccc---hhhhccEEECCCCCCCcCCCChHHHHhhhhcccccccccccCcCCEEECCCCcCCccccchhhHhhe
Confidence 9 5777 47999999999999999 899999988 899999999999998 899876554
No 308
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=2.1e-26 Score=246.06 Aligned_cols=219 Identities=21% Similarity=0.347 Sum_probs=194.7
Q ss_pred CCCCCCceeEeCCCCcEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCcCCCCCc
Q 002255 51 PDPCKWKHIQCSPSNRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNFTSVPS 129 (947)
Q Consensus 51 ~d~C~w~gv~C~~~~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~l~~~~~ 129 (947)
.|+|.|.|+.|...+.++.+++++++++ .+|..+. ++|+.|+|++|++++..+ .|.++++|++|+|++|+++.+++
T Consensus 2 ~~~C~~~~~~C~c~~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~ 78 (270)
T 2o6q_A 2 EALCKKDGGVCSCNNNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPA 78 (270)
T ss_dssp CCCBGGGTCSBEEETTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCT
T ss_pred CccCCCCCCCCEeCCCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeCh
Confidence 4899999999987777889999999999 6787665 689999999999998887 79999999999999999999999
Q ss_pred ccccCCCCCcEEeccCCCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCcccCcCCccccC
Q 002255 130 DFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGK 209 (947)
Q Consensus 130 ~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 209 (947)
..|..+++|++|+|++|++.. ..+..+..+++|++|++++|.+++..+..|. .+++|++|+|++|++++..+..|
T Consensus 79 ~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~--~l~~L~~L~Ls~n~l~~~~~~~~-- 153 (270)
T 2o6q_A 79 GIFKELKNLETLWVTDNKLQA-LPIGVFDQLVNLAELRLDRNQLKSLPPRVFD--SLTKLTYLSLGYNELQSLPKGVF-- 153 (270)
T ss_dssp TTTSSCTTCCEEECCSSCCCC-CCTTTTTTCSSCCEEECCSSCCCCCCTTTTT--TCTTCCEEECCSSCCCCCCTTTT--
T ss_pred hhhcCCCCCCEEECCCCcCCc-CCHhHcccccCCCEEECCCCccCeeCHHHhC--cCcCCCEEECCCCcCCccCHhHc--
Confidence 999999999999999999976 4556789999999999999999988888777 78999999999999996554444
Q ss_pred CCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccCCcCcCCCCC-CCCCCCCCEEEccCCccccCCCccccCCCCCCe
Q 002255 210 SSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPLPD-LSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAV 288 (947)
Q Consensus 210 ~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~ 288 (947)
..+++|+.|+|++|.+++..+. +..+++|++|+|++|+|++..+..+..+++|+.
T Consensus 154 ------------------------~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 209 (270)
T 2o6q_A 154 ------------------------DKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKM 209 (270)
T ss_dssp ------------------------TTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE
T ss_pred ------------------------cCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCE
Confidence 3589999999999999998775 888999999999999999777777999999999
Q ss_pred EeccCCcccccCC
Q 002255 289 VNLTNNLFQGQTP 301 (947)
Q Consensus 289 L~Ls~N~l~g~~p 301 (947)
|+|++|++....+
T Consensus 210 L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 210 LQLQENPWDCTCN 222 (270)
T ss_dssp EECCSSCBCCSSS
T ss_pred EEecCCCeeCCCc
Confidence 9999999976543
No 309
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.94 E-value=1.5e-26 Score=254.10 Aligned_cols=201 Identities=19% Similarity=0.315 Sum_probs=160.8
Q ss_pred CcEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCCCCCCCCCCcEEecCCCcCCCCCcccccC---------C
Q 002255 65 NRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKG---------L 135 (947)
Q Consensus 65 ~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~n~l~~~~~~~~~~---------l 135 (947)
.+++.|+|++|+++ .+|..++++++|++|+|++|.++..++.+.++++|++|+|++|++.+..|..+.. +
T Consensus 104 ~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l 182 (328)
T 4fcg_A 104 SHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLRALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGL 182 (328)
T ss_dssp TTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCCCCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEES
T ss_pred CCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccccCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhccC
Confidence 47999999999999 9999999999999999999999944338999999999999998887776665543 8
Q ss_pred CCCcEEeccCCCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCcccCcCCccccCCCCcee
Q 002255 136 TSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTL 215 (947)
Q Consensus 136 ~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L 215 (947)
++|++|+|++|++. .+|..++++++|++|+|++|.+++ +|..+. .+++|++|+|++|++.+.+|..++
T Consensus 183 ~~L~~L~L~~n~l~--~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~--~l~~L~~L~Ls~n~~~~~~p~~~~------- 250 (328)
T 4fcg_A 183 VNLQSLRLEWTGIR--SLPASIANLQNLKSLKIRNSPLSA-LGPAIH--HLPKLEELDLRGCTALRNYPPIFG------- 250 (328)
T ss_dssp TTCCEEEEEEECCC--CCCGGGGGCTTCCEEEEESSCCCC-CCGGGG--GCTTCCEEECTTCTTCCBCCCCTT-------
T ss_pred CCCCEEECcCCCcC--cchHhhcCCCCCCEEEccCCCCCc-Cchhhc--cCCCCCEEECcCCcchhhhHHHhc-------
Confidence 88888888888886 477778888888888888888874 555565 577888888888887777776554
Q ss_pred eeccCCCCCCCCCchhhhcCCCCCcEEEccCCcCcCCCC-CCCCCCCCCEEEccCCccccCCCccccCCCCCCeEeccCC
Q 002255 216 WLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPLP-DLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNN 294 (947)
Q Consensus 216 ~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N 294 (947)
++++|+.|+|++|++.+.+| .+..+++|++|+|++|++.+.+|..++++++|+.+++..|
T Consensus 251 -------------------~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~ 311 (328)
T 4fcg_A 251 -------------------GRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPH 311 (328)
T ss_dssp -------------------CCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGG
T ss_pred -------------------CCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHH
Confidence 36778888888877777776 4677778888888888777788888888888888877766
Q ss_pred ccc
Q 002255 295 LFQ 297 (947)
Q Consensus 295 ~l~ 297 (947)
.+.
T Consensus 312 ~~~ 314 (328)
T 4fcg_A 312 LQA 314 (328)
T ss_dssp GSC
T ss_pred HHH
Confidence 654
No 310
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=1.3e-27 Score=261.87 Aligned_cols=267 Identities=18% Similarity=0.215 Sum_probs=212.5
Q ss_pred CcEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEec
Q 002255 65 NRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISL 143 (947)
Q Consensus 65 ~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (947)
.+....+++.+++...+...+..+++|++|+|++|++++.+| .|.++++|++|+|++|+++++++ |..+++|++|+|
T Consensus 10 ~~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~L 87 (317)
T 3o53_A 10 NRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDL 87 (317)
T ss_dssp TEEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEEC
T ss_pred CceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEEC
Confidence 356666777777775555666778899999999999998887 79999999999999999998776 889999999999
Q ss_pred cCCCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCcccCcCCccccCCCCceeeeccCCCC
Q 002255 144 DYNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGD 223 (947)
Q Consensus 144 s~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~l~~n~~~ 223 (947)
++|++.+ ++ .+++|++|++++|++++..+.. +++|++|+|++|++++..+..++
T Consensus 88 s~n~l~~--l~----~~~~L~~L~l~~n~l~~~~~~~-----~~~L~~L~l~~N~l~~~~~~~~~--------------- 141 (317)
T 3o53_A 88 NNNYVQE--LL----VGPSIETLHAANNNISRVSCSR-----GQGKKNIYLANNKITMLRDLDEG--------------- 141 (317)
T ss_dssp CSSEEEE--EE----ECTTCCEEECCSSCCSEEEECC-----CSSCEEEECCSSCCCSGGGBCTG---------------
T ss_pred cCCcccc--cc----CCCCcCEEECCCCccCCcCccc-----cCCCCEEECCCCCCCCccchhhh---------------
Confidence 9999865 33 3489999999999999776553 57899999999999976665554
Q ss_pred CCCCCchhhhcCCCCCcEEEccCCcCcCCCCC-C-CCCCCCCEEEccCCccccCCCccccCCCCCCeEeccCCcccccCC
Q 002255 224 SKLNGSVAVIQNMTSLTQLWLHGNSFTGPLPD-L-SGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQTP 301 (947)
Q Consensus 224 ~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~-~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p 301 (947)
.+++|+.|+|++|.+++..+. + ..+++|++|+|++|+|++. |. ...+++|++|+|++|++++.++
T Consensus 142 -----------~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l~~ 208 (317)
T 3o53_A 142 -----------CRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGP 208 (317)
T ss_dssp -----------GGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECG
T ss_pred -----------ccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCcchh
Confidence 367788888888888876553 4 3578888888888888754 32 3347888888888888875433
Q ss_pred CCCCCcccccccCCCCcccCcCCCcCCCccceeeecccccCChhhhhccCCCCCCCCCCCCCcccCCCCceeEEEecCCC
Q 002255 302 KFNSPVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLG 381 (947)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~ 381 (947)
.+ ....+|+.|+|++|.
T Consensus 209 ~~---------------------------------------------------------------~~l~~L~~L~L~~N~ 225 (317)
T 3o53_A 209 EF---------------------------------------------------------------QSAAGVTWISLRNNK 225 (317)
T ss_dssp GG---------------------------------------------------------------GGGTTCSEEECTTSC
T ss_pred hh---------------------------------------------------------------cccCcccEEECcCCc
Confidence 21 112367888888888
Q ss_pred ceeeccccccCCccCCeEeccCCccc-ccCCCcCCCCCCCCccccc-cccccccCCC
Q 002255 382 LSGTISSNFSRLTSLRQLMLSGNELT-GTIPKELTTLPSLEMLDVS-NNHLFGKVPN 436 (947)
Q Consensus 382 l~g~ip~~~~~l~~L~~L~Ls~N~l~-g~iP~~l~~l~~L~~L~ls-~N~l~g~iP~ 436 (947)
++ .+|..+..+++|+.|+|++|+++ +.+|..+..+++|+.|+++ .+.++|..|.
T Consensus 226 l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 226 LV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp CC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSC
T ss_pred cc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchh
Confidence 88 57888899999999999999999 8889999999999999999 5678887764
No 311
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.94 E-value=1.1e-26 Score=258.86 Aligned_cols=276 Identities=21% Similarity=0.234 Sum_probs=197.0
Q ss_pred CCcEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEe
Q 002255 64 SNRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTIS 142 (947)
Q Consensus 64 ~~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 142 (947)
..+++.|+|++|++++..+..|.++++|++|+|++|++++..| .|.++++|++|+|++|+++++++..|..+++|++|+
T Consensus 51 ~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 130 (353)
T 2z80_A 51 TEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLN 130 (353)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEE
T ss_pred cccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEE
Confidence 3589999999999997767789999999999999999999887 699999999999999999999999899999999999
Q ss_pred ccCCCCCCCCCcc--cccCCCCCCeEeccCce-eeeccCcccCCCCCCCccEEEccCCcccCcCCccccCCCCceeeecc
Q 002255 143 LDYNSFDSWVIPE--SLKDATGLQRFSANGAN-ITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNG 219 (947)
Q Consensus 143 Ls~N~l~~~~~p~--~~~~l~~L~~L~l~~n~-l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~l~~ 219 (947)
|++|++.. +|. .+.++++|++|++++|+ +.+..+..+. .+++|++|+|++|++++..|..+..
T Consensus 131 L~~n~l~~--l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~--~l~~L~~L~l~~n~l~~~~~~~l~~---------- 196 (353)
T 2z80_A 131 LLGNPYKT--LGETSLFSHLTKLQILRVGNMDTFTKIQRKDFA--GLTFLEELEIDASDLQSYEPKSLKS---------- 196 (353)
T ss_dssp CTTCCCSS--SCSSCSCTTCTTCCEEEEEESSSCCEECTTTTT--TCCEEEEEEEEETTCCEECTTTTTT----------
T ss_pred CCCCCCcc--cCchhhhccCCCCcEEECCCCccccccCHHHcc--CCCCCCEEECCCCCcCccCHHHHhc----------
Confidence 99999975 554 89999999999999995 6766677787 6899999999999999888877754
Q ss_pred CCCCCCCCCchhhhcCCCCCcEEEccCCcCcCCCCC-CCCCCCCCEEEccCCccccCCCcccc---CCCCCCeEeccCCc
Q 002255 220 QKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPLPD-LSGLSSLQDFSVRDNQLTGIVPSSLV---NLHSLAVVNLTNNL 295 (947)
Q Consensus 220 n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~l~~N~l~g~~p~~l~---~l~~L~~L~Ls~N~ 295 (947)
+++|++|+|++|.++..++. +..+++|+.|++++|++++..+..+. ..+.++.++|++|.
T Consensus 197 ----------------l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~ 260 (353)
T 2z80_A 197 ----------------IQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVK 260 (353)
T ss_dssp ----------------CSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCB
T ss_pred ----------------cccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhcccccccc
Confidence 44455555555554332222 22244555555555555543333222 23445555555555
Q ss_pred ccccCCCCCCCcccccccCCCCcccCcCCCcCCCccceeeecccccCChhhhhccCCCCCCCCCCCCCcccCCCCceeEE
Q 002255 296 FQGQTPKFNSPVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAGGNITVV 375 (947)
Q Consensus 296 l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~L 375 (947)
+++..- ...+. .+...++|+.|
T Consensus 261 l~~~~l---------------------------------~~l~~-------------------------~l~~l~~L~~L 282 (353)
T 2z80_A 261 ITDESL---------------------------------FQVMK-------------------------LLNQISGLLEL 282 (353)
T ss_dssp CCHHHH---------------------------------HHHHH-------------------------HHHTCTTCCEE
T ss_pred ccCcch---------------------------------hhhHH-------------------------HHhcccCCCEE
Confidence 543100 00000 00112345666
Q ss_pred EecCCCceeecccc-ccCCccCCeEeccCCcccccCCCcCCCCCCCCccccccccccccCC
Q 002255 376 NLKNLGLSGTISSN-FSRLTSLRQLMLSGNELTGTIPKELTTLPSLEMLDVSNNHLFGKVP 435 (947)
Q Consensus 376 ~Ls~n~l~g~ip~~-~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ls~N~l~g~iP 435 (947)
+|++|+++ .+|.. |+++++|++|+|++|.+++..| .+++|...-+...+.+|
T Consensus 283 ~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~~~-------~l~~l~~~~~~~~~~~~ 335 (353)
T 2z80_A 283 EFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP-------RIDYLSRWLNKNSQKEQ 335 (353)
T ss_dssp ECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHH-------HHHHHHHHHHHTTTTEE
T ss_pred ECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCcCC-------CcHHHHHHHHhccccCC
Confidence 66666666 45555 5889999999999999985443 56677666677666664
No 312
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.94 E-value=4.1e-26 Score=246.01 Aligned_cols=179 Identities=19% Similarity=0.264 Sum_probs=104.3
Q ss_pred CEEEcccCcccCcCCCCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCCcccccCCCCCCeEeccCc
Q 002255 92 TVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGA 171 (947)
Q Consensus 92 ~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n 171 (947)
+.++.+++.++..+..+ .++|++|+|++|+++++++..|..+++|++|+|++|.+.+ ..|..+..+++|++|++++|
T Consensus 14 ~~~~c~~~~l~~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQAVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLAR-IDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCSSCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCE-ECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcccCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccce-eCHhhcCCccCCCEEeCCCC
Confidence 56777777776543333 3567777777777777776667777777777777777654 34556666666666666666
Q ss_pred e-eeeccCcccCCCCCCCccEEEccCCcccCcCCccccCCCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccCCcCc
Q 002255 172 N-ITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFT 250 (947)
Q Consensus 172 ~-l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~ 250 (947)
. +....|..+. .+++|++|+|++|++++..|..+. ++++|++|+|++|.++
T Consensus 91 ~~l~~~~~~~~~--~l~~L~~L~l~~n~l~~~~~~~~~--------------------------~l~~L~~L~l~~n~l~ 142 (285)
T 1ozn_A 91 AQLRSVDPATFH--GLGRLHTLHLDRCGLQELGPGLFR--------------------------GLAALQYLYLQDNALQ 142 (285)
T ss_dssp TTCCCCCTTTTT--TCTTCCEEECTTSCCCCCCTTTTT--------------------------TCTTCCEEECCSSCCC
T ss_pred CCccccCHHHhc--CCcCCCEEECCCCcCCEECHhHhh--------------------------CCcCCCEEECCCCccc
Confidence 5 4444455554 455666666666665544443332 3555666666666655
Q ss_pred CCCCC-CCCCCCCCEEEccCCccccCCCccccCCCCCCeEeccCCcccccCC
Q 002255 251 GPLPD-LSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQTP 301 (947)
Q Consensus 251 ~~~~~-~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p 301 (947)
+.++. +..+++|++|+|++|++++..+..+..+++|+.|+|++|++++..|
T Consensus 143 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 194 (285)
T 1ozn_A 143 ALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHP 194 (285)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred ccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCH
Confidence 54443 4555555555555555554444445555555555555555554433
No 313
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=6.5e-27 Score=271.21 Aligned_cols=235 Identities=18% Similarity=0.212 Sum_probs=182.1
Q ss_pred CCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCCcccccCCCCCCeE
Q 002255 88 LSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRF 166 (947)
Q Consensus 88 l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L 166 (947)
+++|++|+|++|.+++.+| .|.++++|++|+|++|.++++++ |..+++|++|+|++|.|.+ +| ..++|++|
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~--l~----~~~~L~~L 104 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQE--LL----VGPSIETL 104 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEE--EE----ECTTCCEE
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCC--CC----CCCCcCEE
Confidence 3478888888888888776 68888888888888888887766 7888888888888888864 33 23788888
Q ss_pred eccCceeeeccCcccCCCCCCCccEEEccCCcccCcCCccccCCCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccC
Q 002255 167 SANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHG 246 (947)
Q Consensus 167 ~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~ 246 (947)
++++|.+++..+.. +++|++|+|++|++++..|..++ ++++|+.|+|++
T Consensus 105 ~L~~N~l~~~~~~~-----l~~L~~L~L~~N~l~~~~~~~~~--------------------------~l~~L~~L~Ls~ 153 (487)
T 3oja_A 105 HAANNNISRVSCSR-----GQGKKNIYLANNKITMLRDLDEG--------------------------CRSRVQYLDLKL 153 (487)
T ss_dssp ECCSSCCCCEEECC-----CSSCEEEECCSSCCCSGGGBCGG--------------------------GGSSEEEEECTT
T ss_pred ECcCCcCCCCCccc-----cCCCCEEECCCCCCCCCCchhhc--------------------------CCCCCCEEECCC
Confidence 88888888766543 56788899999988877776554 367788888888
Q ss_pred CcCcCCCCC-CC-CCCCCCEEEccCCccccCCCccccCCCCCCeEeccCCcccccCCCCCCCcccccccCCCCcccCcCC
Q 002255 247 NSFTGPLPD-LS-GLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQTPKFNSPVRFDMAKGSNSFCLDDAG 324 (947)
Q Consensus 247 N~l~~~~~~-~~-~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 324 (947)
|.|++.+|. +. .+++|++|+|++|.|++. | .+..+++|+.|+|++|++++.+|.+
T Consensus 154 N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~--------------------- 210 (487)
T 3oja_A 154 NEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFMGPEF--------------------- 210 (487)
T ss_dssp SCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEECGGG---------------------
T ss_pred CCCCCcChHHHhhhCCcccEEecCCCccccc-c-ccccCCCCCEEECCCCCCCCCCHhH---------------------
Confidence 888876553 44 578888888888888755 2 2345788888888888887654431
Q ss_pred CcCCCccceeeecccccCChhhhhccCCCCCCCCCCCCCcccCCCCceeEEEecCCCceeeccccccCCccCCeEeccCC
Q 002255 325 VACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLSGTISSNFSRLTSLRQLMLSGN 404 (947)
Q Consensus 325 ~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g~ip~~~~~l~~L~~L~Ls~N 404 (947)
..+++|+.|+|++|.|++ +|..++.+++|+.|+|++|
T Consensus 211 ------------------------------------------~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N 247 (487)
T 3oja_A 211 ------------------------------------------QSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGN 247 (487)
T ss_dssp ------------------------------------------GGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTC
T ss_pred ------------------------------------------cCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCC
Confidence 112357888888888885 7888999999999999999
Q ss_pred ccc-ccCCCcCCCCCCCCcccccc
Q 002255 405 ELT-GTIPKELTTLPSLEMLDVSN 427 (947)
Q Consensus 405 ~l~-g~iP~~l~~l~~L~~L~ls~ 427 (947)
.+. +.+|..+..++.|+.|+++.
T Consensus 248 ~l~c~~~~~~~~~l~~L~~l~~~~ 271 (487)
T 3oja_A 248 GFHCGTLRDFFSKNQRVQTVAKQT 271 (487)
T ss_dssp CBCHHHHHHHHTTCHHHHHHHHHH
T ss_pred CCcCcchHHHHHhCCCCcEEeccc
Confidence 998 88899999999999999873
No 314
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.93 E-value=9.2e-28 Score=262.36 Aligned_cols=263 Identities=18% Similarity=0.189 Sum_probs=208.6
Q ss_pred CCCC-CCCCCCceeEeCC-CCcEEEEEecCCcccccCcccccCCCCCCEEEcccCccc-CcCC-CCC-------CCCCCc
Q 002255 47 GWTD-PDPCKWKHIQCSP-SNRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLT-GQIP-SLS-------GLSSLQ 115 (947)
Q Consensus 47 ~w~~-~d~C~w~gv~C~~-~~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~-~~~p-~~~-------~l~~L~ 115 (947)
.|.. ..|+.+..+.... ..+++.|++++|.+ .+|..+... |+.|+|++|.++ +.+| .+. ++++|+
T Consensus 23 ~~~~~~~c~~~~~~~~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~ 98 (312)
T 1wwl_A 23 DWSSAFNCLGAADVELYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQ 98 (312)
T ss_dssp CGGGGGGSSSCSEEEEEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCC
T ss_pred chHHHhhhhccccEEEEccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCcc
Confidence 4643 3555565544321 24678888999999 788877755 999999999994 4566 343 799999
Q ss_pred EEecCCCcCCCCCcccc--cCCCCCcEEeccCCCCCCCCCcccccCC-----CCCCeEeccCceeeeccCcccCCCCCCC
Q 002255 116 EVLFDDNNFTSVPSDFF--KGLTSLQTISLDYNSFDSWVIPESLKDA-----TGLQRFSANGANITGTIPDFLGGDTIPG 188 (947)
Q Consensus 116 ~L~L~~n~l~~~~~~~~--~~l~~L~~L~Ls~N~l~~~~~p~~~~~l-----~~L~~L~l~~n~l~~~~p~~~~~~~l~~ 188 (947)
+|+|++|++++..|..+ ..+++|++|+|++|++.+ +|..++.+ ++|++|+|++|++++..|..++ .+++
T Consensus 99 ~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~--~l~~ 174 (312)
T 1wwl_A 99 ELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWAT--RDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVR--VFPA 174 (312)
T ss_dssp EEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSS--SSSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCC--CCSS
T ss_pred EEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcc--hhHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhc--cCCC
Confidence 99999999997666655 899999999999999986 38888877 9999999999999998889988 7999
Q ss_pred ccEEEccCCcccCcC--CccccCCCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccCCcCcCCC--C-C-CCCCCCC
Q 002255 189 LMHLHLAFNFLQGPI--PLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPL--P-D-LSGLSSL 262 (947)
Q Consensus 189 L~~L~Ls~N~l~~~~--p~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~-~-~~~l~~L 262 (947)
|++|+|++|++.+.+ |..+. +.++++|++|+|++|+|++.. + . +..+++|
T Consensus 175 L~~L~Ls~N~l~~~~~~~~~~~------------------------~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L 230 (312)
T 1wwl_A 175 LSTLDLSDNPELGERGLISALC------------------------PLKFPTLQVLALRNAGMETPSGVCSALAAARVQL 230 (312)
T ss_dssp CCEEECCSCTTCHHHHHHHHSC------------------------TTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCC
T ss_pred CCEEECCCCCcCcchHHHHHHH------------------------hccCCCCCEEECCCCcCcchHHHHHHHHhcCCCC
Confidence 999999999988653 22221 245788999999999988432 1 2 3567899
Q ss_pred CEEEccCCccccCCC-ccccCCCCCCeEeccCCcccccCCCCCCCcccccccCCCCcccCcCCCcCCCccceeeeccccc
Q 002255 263 QDFSVRDNQLTGIVP-SSLVNLHSLAVVNLTNNLFQGQTPKFNSPVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSV 341 (947)
Q Consensus 263 ~~L~l~~N~l~g~~p-~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 341 (947)
++|+|++|++++.+| ..+..+++|++|+|++|+++ .+|..+
T Consensus 231 ~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~------------------------------------- 272 (312)
T 1wwl_A 231 QGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGL------------------------------------- 272 (312)
T ss_dssp SEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSC-------------------------------------
T ss_pred CEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhc-------------------------------------
Confidence 999999999998775 55667899999999999998 455321
Q ss_pred CChhhhhccCCCCCCCCCCCCCcccCCCCceeEEEecCCCceeeccccccCCccCCeEeccCCcccc
Q 002255 342 GYPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLSGTISSNFSRLTSLRQLMLSGNELTG 408 (947)
Q Consensus 342 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g 408 (947)
..+|+.|+|++|+|++. |. +..+++|++|+|++|+|++
T Consensus 273 ---------------------------~~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 273 ---------------------------PAKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp ---------------------------CSEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred ---------------------------cCCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 03689999999999976 66 9999999999999999985
No 315
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.93 E-value=4.3e-25 Score=253.59 Aligned_cols=237 Identities=21% Similarity=0.312 Sum_probs=206.9
Q ss_pred CCceeEeCC----------CCcEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCc
Q 002255 55 KWKHIQCSP----------SNRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNN 123 (947)
Q Consensus 55 ~w~gv~C~~----------~~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~ 123 (947)
.|..|.|.. ...++.|+|++|++.+..+..|.++++|++|+|++|.+++..+ .|.++++|++|+|++|+
T Consensus 44 ~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~ 123 (440)
T 3zyj_A 44 QFSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR 123 (440)
T ss_dssp TSCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCc
Confidence 367888864 2468999999999998888999999999999999999998876 79999999999999999
Q ss_pred CCCCCcccccCCCCCcEEeccCCCCCCCCCcccccCCCCCCeEeccCceeeeccCc-ccCCCCCCCccEEEccCCcccCc
Q 002255 124 FTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGANITGTIPD-FLGGDTIPGLMHLHLAFNFLQGP 202 (947)
Q Consensus 124 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~-~~~~~~l~~L~~L~Ls~N~l~~~ 202 (947)
++.+++..|..+++|++|+|++|++.. ..+..|.++++|++|+|++|+..+.++. .|. .+++|++|+|++|+++ .
T Consensus 124 l~~~~~~~~~~l~~L~~L~L~~N~i~~-~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~--~l~~L~~L~L~~n~l~-~ 199 (440)
T 3zyj_A 124 LTTIPNGAFVYLSKLKELWLRNNPIES-IPSYAFNRIPSLRRLDLGELKRLSYISEGAFE--GLSNLRYLNLAMCNLR-E 199 (440)
T ss_dssp CSSCCTTTSCSCSSCCEEECCSCCCCE-ECTTTTTTCTTCCEEECCCCTTCCEECTTTTT--TCSSCCEEECTTSCCS-S
T ss_pred CCeeCHhHhhccccCceeeCCCCcccc-cCHHHhhhCcccCEeCCCCCCCcceeCcchhh--cccccCeecCCCCcCc-c
Confidence 999999999999999999999999976 5566899999999999999665555555 565 6899999999999999 5
Q ss_pred CCccccCCCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccCCcCcCCCCC-CCCCCCCCEEEccCCccccCCCcccc
Q 002255 203 IPLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPLPD-LSGLSSLQDFSVRDNQLTGIVPSSLV 281 (947)
Q Consensus 203 ~p~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~l~~N~l~g~~p~~l~ 281 (947)
+|......+|+.|+|++|.+...... .|.++++|+.|+|++|++++..+. +.++++|+.|+|++|+|++..+..+.
T Consensus 200 ~~~~~~l~~L~~L~Ls~N~l~~~~~~---~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 276 (440)
T 3zyj_A 200 IPNLTPLIKLDELDLSGNHLSAIRPG---SFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFT 276 (440)
T ss_dssp CCCCTTCSSCCEEECTTSCCCEECTT---TTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTS
T ss_pred ccccCCCcccCEEECCCCccCccChh---hhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhc
Confidence 67544557899999999988766443 467789999999999999998774 88899999999999999988788889
Q ss_pred CCCCCCeEeccCCcccc
Q 002255 282 NLHSLAVVNLTNNLFQG 298 (947)
Q Consensus 282 ~l~~L~~L~Ls~N~l~g 298 (947)
.+++|+.|+|++|++..
T Consensus 277 ~l~~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 277 PLHHLERIHLHHNPWNC 293 (440)
T ss_dssp SCTTCCEEECCSSCEEC
T ss_pred cccCCCEEEcCCCCccC
Confidence 99999999999999873
No 316
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.93 E-value=3.6e-25 Score=255.21 Aligned_cols=236 Identities=19% Similarity=0.300 Sum_probs=206.9
Q ss_pred CceeEeCCC----------CcEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCcC
Q 002255 56 WKHIQCSPS----------NRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNF 124 (947)
Q Consensus 56 w~gv~C~~~----------~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~l 124 (947)
|..|.|... .+++.|+|++|++++..|..|.++++|++|+|++|++++..+ .|.++++|++|+|++|++
T Consensus 56 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l 135 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWL 135 (452)
T ss_dssp SCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcC
Confidence 567888642 379999999999999989999999999999999999999887 799999999999999999
Q ss_pred CCCCcccccCCCCCcEEeccCCCCCCCCCcccccCCCCCCeEeccCceeeeccCc-ccCCCCCCCccEEEccCCcccCcC
Q 002255 125 TSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGANITGTIPD-FLGGDTIPGLMHLHLAFNFLQGPI 203 (947)
Q Consensus 125 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~-~~~~~~l~~L~~L~Ls~N~l~~~~ 203 (947)
+.+++..|..+++|++|+|++|++.. ..+..+.++++|++|++++|+..+.++. .|. .+++|++|+|++|++++ +
T Consensus 136 ~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~--~l~~L~~L~L~~n~l~~-~ 211 (452)
T 3zyi_A 136 TVIPSGAFEYLSKLRELWLRNNPIES-IPSYAFNRVPSLMRLDLGELKKLEYISEGAFE--GLFNLKYLNLGMCNIKD-M 211 (452)
T ss_dssp SBCCTTTSSSCTTCCEEECCSCCCCE-ECTTTTTTCTTCCEEECCCCTTCCEECTTTTT--TCTTCCEEECTTSCCSS-C
T ss_pred CccChhhhcccCCCCEEECCCCCcce-eCHhHHhcCCcccEEeCCCCCCccccChhhcc--CCCCCCEEECCCCcccc-c
Confidence 99999999999999999999999975 4566899999999999999655555655 465 68999999999999995 5
Q ss_pred CccccCCCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccCCcCcCCCCC-CCCCCCCCEEEccCCccccCCCccccC
Q 002255 204 PLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPLPD-LSGLSSLQDFSVRDNQLTGIVPSSLVN 282 (947)
Q Consensus 204 p~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~l~~N~l~g~~p~~l~~ 282 (947)
|......+|+.|+|++|.+..... ..|.++++|+.|+|++|++++..+. +.++++|+.|+|++|+|++..+..+..
T Consensus 212 ~~~~~l~~L~~L~Ls~N~l~~~~~---~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 288 (452)
T 3zyi_A 212 PNLTPLVGLEELEMSGNHFPEIRP---GSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTP 288 (452)
T ss_dssp CCCTTCTTCCEEECTTSCCSEECG---GGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTT
T ss_pred ccccccccccEEECcCCcCcccCc---ccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhcc
Confidence 654445789999999998876544 3477899999999999999998774 888999999999999999877788899
Q ss_pred CCCCCeEeccCCcccc
Q 002255 283 LHSLAVVNLTNNLFQG 298 (947)
Q Consensus 283 l~~L~~L~Ls~N~l~g 298 (947)
+++|+.|+|++|++..
T Consensus 289 l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 289 LRYLVELHLHHNPWNC 304 (452)
T ss_dssp CTTCCEEECCSSCEEC
T ss_pred ccCCCEEEccCCCcCC
Confidence 9999999999999874
No 317
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.93 E-value=1.4e-26 Score=253.56 Aligned_cols=245 Identities=18% Similarity=0.214 Sum_probs=207.9
Q ss_pred CCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCCcccccCCCCCCeEec
Q 002255 90 SLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSA 168 (947)
Q Consensus 90 ~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l 168 (947)
.++.++++.+.+...+. .+..+++|++|+|++|+++++++..|..+++|++|+|++|++.+ ++. +..+++|++|++
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~--~~~-~~~l~~L~~L~L 87 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYE--TLD-LESLSTLRTLDL 87 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEE--EEE-ETTCTTCCEEEC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCc--chh-hhhcCCCCEEEC
Confidence 45566777887766555 46678899999999999999999999999999999999999975 333 999999999999
Q ss_pred cCceeeeccCcccCCCCCCCccEEEccCCcccCcCCccccCCCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccCCc
Q 002255 169 NGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNS 248 (947)
Q Consensus 169 ~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~ 248 (947)
++|.+++..+ .++|++|++++|++++..+. .+++|+.|+|++|+
T Consensus 88 s~n~l~~l~~-------~~~L~~L~l~~n~l~~~~~~-----------------------------~~~~L~~L~l~~N~ 131 (317)
T 3o53_A 88 NNNYVQELLV-------GPSIETLHAANNNISRVSCS-----------------------------RGQGKKNIYLANNK 131 (317)
T ss_dssp CSSEEEEEEE-------CTTCCEEECCSSCCSEEEEC-----------------------------CCSSCEEEECCSSC
T ss_pred cCCccccccC-------CCCcCEEECCCCccCCcCcc-----------------------------ccCCCCEEECCCCC
Confidence 9999986432 47999999999999865432 25789999999999
Q ss_pred CcCCCC-CCCCCCCCCEEEccCCccccCCCcccc-CCCCCCeEeccCCcccccCCCCCCCcccccccCCCCcccCcCCCc
Q 002255 249 FTGPLP-DLSGLSSLQDFSVRDNQLTGIVPSSLV-NLHSLAVVNLTNNLFQGQTPKFNSPVRFDMAKGSNSFCLDDAGVA 326 (947)
Q Consensus 249 l~~~~~-~~~~l~~L~~L~l~~N~l~g~~p~~l~-~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (947)
+++..+ .+..+++|++|+|++|++++..|..+. .+++|++|+|++|++++..+.
T Consensus 132 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~------------------------ 187 (317)
T 3o53_A 132 ITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQ------------------------ 187 (317)
T ss_dssp CCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECC------------------------
T ss_pred CCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcccccc------------------------
Confidence 999877 588899999999999999988787774 799999999999999864211
Q ss_pred CCCccceeeecccccCChhhhhccCCCCCCCCCCCCCcccCCCCceeEEEecCCCceeeccccccCCccCCeEeccCCcc
Q 002255 327 CDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLSGTISSNFSRLTSLRQLMLSGNEL 406 (947)
Q Consensus 327 ~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l 406 (947)
....+|+.|+|++|++++ +|..+..+++|+.|+|++|+|
T Consensus 188 ----------------------------------------~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l 226 (317)
T 3o53_A 188 ----------------------------------------VVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKL 226 (317)
T ss_dssp ----------------------------------------CCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCC
T ss_pred ----------------------------------------cccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCcc
Confidence 013479999999999996 555699999999999999999
Q ss_pred cccCCCcCCCCCCCCcccccccccc-ccCCCCcc
Q 002255 407 TGTIPKELTTLPSLEMLDVSNNHLF-GKVPNFRQ 439 (947)
Q Consensus 407 ~g~iP~~l~~l~~L~~L~ls~N~l~-g~iP~~~~ 439 (947)
+ .+|..+..+++|+.|+|++|+++ +.+|.+..
T Consensus 227 ~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~ 259 (317)
T 3o53_A 227 V-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFS 259 (317)
T ss_dssp C-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHH
T ss_pred c-chhhHhhcCCCCCEEEccCCCccCcCHHHHHh
Confidence 9 79999999999999999999998 77775543
No 318
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.92 E-value=5.7e-26 Score=265.34 Aligned_cols=188 Identities=16% Similarity=0.189 Sum_probs=147.8
Q ss_pred CcCceecccCceEEEEEEEcCCcEEEEEEecccccCh------HHHHHHHHHHHHHHcCCCCCcceEEEEEEeCCeeEEE
Q 002255 593 SEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSE------KGFAEFKSEIAVLTKVRHRHLVGLLGYCLDGNERLLV 666 (947)
Q Consensus 593 ~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 666 (947)
...++||+|+||.||+|.. .++.+|+|+........ ...+++.+|++++++++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 3457899999999999954 47889999875443221 1235689999999999999999777777788888999
Q ss_pred EEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceec
Q 002255 667 YEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 746 (947)
Q Consensus 667 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~ 746 (947)
|||+++++|.+++.. +..++.|+++||+|||+ ++|+||||||+|||++. .+||+|||+++..
T Consensus 418 mE~~~ggsL~~~l~~-------------~~~i~~qi~~aL~~LH~---~gIiHrDiKp~NILl~~--~~kL~DFGla~~~ 479 (540)
T 3en9_A 418 MSYINGKLAKDVIED-------------NLDIAYKIGEIVGKLHK---NDVIHNDLTTSNFIFDK--DLYIIDFGLGKIS 479 (540)
T ss_dssp EECCCSEEHHHHSTT-------------CTHHHHHHHHHHHHHHH---TTEECTTCCTTSEEESS--SEEECCCTTCEEC
T ss_pred EECCCCCCHHHHHHH-------------HHHHHHHHHHHHHHHHH---CcCccCCCCHHHEEECC--eEEEEECccCEEC
Confidence 999999999999843 45789999999999997 89999999999999999 9999999999987
Q ss_pred CCCCCcc-----eeecccccccccCcccccc--CCcCcccccccHHHHHHHHHhCCCCCC
Q 002255 747 PDNGKHS-----IETRLAGTFGYLAPEYAVT--GRVTTKVDVFSFGVILMELITGRKALD 799 (947)
Q Consensus 747 ~~~~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGvil~elltg~~p~~ 799 (947)
....... ......||+.|||||++.. ..|+.++|+|+..+-..+-+.++.+|.
T Consensus 480 ~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 480 NLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred CCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 5532211 1235689999999999976 568889999999999888888777663
No 319
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.92 E-value=2.2e-24 Score=254.86 Aligned_cols=248 Identities=24% Similarity=0.293 Sum_probs=210.1
Q ss_pred CcEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCCCCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEecc
Q 002255 65 NRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLD 144 (947)
Q Consensus 65 ~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 144 (947)
.+++.|+|++|+++ .+|. .+++|++|+|++|+|++.++ .+++|++|+|++|++++++. .+++|++|+|+
T Consensus 61 ~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~lp~---~l~~L~~L~Ls~N~l~~l~~----~l~~L~~L~L~ 129 (622)
T 3g06_A 61 AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTSLPV---LPPGLLELSIFSNPLTHLPA----LPSGLCKLWIF 129 (622)
T ss_dssp TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSCCCC---CCTTCCEEEECSCCCCCCCC----CCTTCCEEECC
T ss_pred CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCcCCC---CCCCCCEEECcCCcCCCCCC----CCCCcCEEECC
Confidence 47999999999999 6776 57999999999999986544 78999999999999999886 57899999999
Q ss_pred CCCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCcccCcCCccccCCCCceeeeccCCCCC
Q 002255 145 YNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDS 224 (947)
Q Consensus 145 ~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~l~~n~~~~ 224 (947)
+|++.. +|.. +++|++|+|++|++++ +|.. +++|+.|+|++|++++ +|.. ..+|+.|++++|.+..
T Consensus 130 ~N~l~~--lp~~---l~~L~~L~Ls~N~l~~-l~~~-----~~~L~~L~L~~N~l~~-l~~~--~~~L~~L~Ls~N~l~~ 195 (622)
T 3g06_A 130 GNQLTS--LPVL---PPGLQELSVSDNQLAS-LPAL-----PSELCKLWAYNNQLTS-LPML--PSGLQELSVSDNQLAS 195 (622)
T ss_dssp SSCCSC--CCCC---CTTCCEEECCSSCCSC-CCCC-----CTTCCEEECCSSCCSC-CCCC--CTTCCEEECCSSCCSC
T ss_pred CCCCCc--CCCC---CCCCCEEECcCCcCCC-cCCc-----cCCCCEEECCCCCCCC-Cccc--CCCCcEEECCCCCCCC
Confidence 999975 6664 4899999999999985 4542 4689999999999995 6632 3679999999999886
Q ss_pred CCCCchhhhcCCCCCcEEEccCCcCcCCCCCCCCCCCCCEEEccCCccccCCCccccCCCCCCeEeccCCcccccCCCCC
Q 002255 225 KLNGSVAVIQNMTSLTQLWLHGNSFTGPLPDLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQTPKFN 304 (947)
Q Consensus 225 ~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~ 304 (947)
... .+++|+.|++++|.++..+. .+++|+.|+|++|+|++ +| ..+++|+.|+|++|+|++ +|.
T Consensus 196 l~~-------~~~~L~~L~L~~N~l~~l~~---~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~-- 258 (622)
T 3g06_A 196 LPT-------LPSELYKLWAYNNRLTSLPA---LPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM-- 258 (622)
T ss_dssp CCC-------CCTTCCEEECCSSCCSSCCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC--
T ss_pred CCC-------ccchhhEEECcCCcccccCC---CCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc--
Confidence 433 25889999999999996543 25889999999999995 67 566899999999999984 332
Q ss_pred CCcccccccCCCCcccCcCCCcCCCccceeeecccccCChhhhhccCCCCCCCCCCCCCcccCCCCceeEEEecCCCcee
Q 002255 305 SPVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLSG 384 (947)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g 384 (947)
.+++|+.|+|++|+|+
T Consensus 259 ---------------------------------------------------------------~~~~L~~L~Ls~N~L~- 274 (622)
T 3g06_A 259 ---------------------------------------------------------------LPSGLLSLSVYRNQLT- 274 (622)
T ss_dssp ---------------------------------------------------------------CCTTCCEEECCSSCCC-
T ss_pred ---------------------------------------------------------------ccccCcEEeCCCCCCC-
Confidence 1236899999999999
Q ss_pred eccccccCCccCCeEeccCCcccccCCCcCCCCC
Q 002255 385 TISSNFSRLTSLRQLMLSGNELTGTIPKELTTLP 418 (947)
Q Consensus 385 ~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~ 418 (947)
.+|..|+++++|+.|+|++|.|+|.+|..+..++
T Consensus 275 ~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 275 RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 8899999999999999999999999998777655
No 320
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=2.6e-24 Score=230.75 Aligned_cols=218 Identities=22% Similarity=0.264 Sum_probs=155.2
Q ss_pred cCcccccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCCccccc
Q 002255 80 TLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLK 158 (947)
Q Consensus 80 ~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~ 158 (947)
.+|..+. ++|++|+|++|++++..+ .|.++++|++|+|++|+++++++..|..+++|++|+|++|++.+ ..+..+.
T Consensus 21 ~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~ 97 (276)
T 2z62_A 21 KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQS-LALGAFS 97 (276)
T ss_dssp SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCE-ECTTTTT
T ss_pred ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCc-cChhhhc
Confidence 4554443 456677777777666655 56666777777777777776666666667777777777776654 3445666
Q ss_pred CCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCcccCc-CCccccC-CCCceeeeccCCCCCCCCCchhhhcCC
Q 002255 159 DATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGP-IPLSFGK-SSIQTLWLNGQKGDSKLNGSVAVIQNM 236 (947)
Q Consensus 159 ~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~-~~L~~L~l~~n~~~~~~~~~~~~~~~l 236 (947)
++++|++|++++|++++..+..+. .+++|++|+|++|++++. +|..+.. .+|+.|+|++|.+..........+.++
T Consensus 98 ~l~~L~~L~l~~n~l~~~~~~~~~--~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 175 (276)
T 2z62_A 98 GLSSLQKLVAVETNLASLENFPIG--HLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 175 (276)
T ss_dssp TCTTCCEEECTTSCCCCSTTCCCT--TCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTC
T ss_pred CCccccEEECCCCCccccCchhcc--cCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhc
Confidence 677777777777776665554555 566777777777776652 4655544 567777777776666555455555566
Q ss_pred CCCc-EEEccCCcCcCCCCCCCCCCCCCEEEccCCccccCCCccccCCCCCCeEeccCCcccccCCC
Q 002255 237 TSLT-QLWLHGNSFTGPLPDLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQTPK 302 (947)
Q Consensus 237 ~~L~-~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~ 302 (947)
+.|. .|+|++|.+++..+......+|+.|+|++|++++..+..+.++++|+.|+|++|++++..|.
T Consensus 176 ~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 242 (276)
T 2z62_A 176 PLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 242 (276)
T ss_dssp TTCCEEEECCSSCCCEECTTSSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTT
T ss_pred cccceeeecCCCcccccCccccCCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCc
Confidence 6666 89999999999888766667999999999999977777789999999999999999987764
No 321
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.91 E-value=6.2e-24 Score=227.79 Aligned_cols=212 Identities=17% Similarity=0.173 Sum_probs=127.4
Q ss_pred CCCcEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccE
Q 002255 112 SSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMH 191 (947)
Q Consensus 112 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~ 191 (947)
++|++|+|++|+++++++..|..+++|++|+|++|++.. ..+..+.++++|++|++++|.+++..+..+. .
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~--~------ 98 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQT-IEDGAYQSLSHLSTLILTGNPIQSLALGAFS--G------ 98 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCE-ECTTTTTTCTTCCEEECTTCCCCEECTTTTT--T------
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCc-cCHHHccCCcCCCEEECCCCccCccChhhhc--C------
Confidence 457777777777777666666667777777777776643 2333444444444444444444444333333 2
Q ss_pred EEccCCcccCcCCccccCCCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccCCcCcCCCC-CCCCCCCCCEEEccCC
Q 002255 192 LHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPLP-DLSGLSSLQDFSVRDN 270 (947)
Q Consensus 192 L~Ls~N~l~~~~p~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~l~~N 270 (947)
+++|+.|+|++|.+++..+ .+..+++|++|++++|
T Consensus 99 --------------------------------------------l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 134 (276)
T 2z62_A 99 --------------------------------------------LSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHN 134 (276)
T ss_dssp --------------------------------------------CTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSS
T ss_pred --------------------------------------------CccccEEECCCCCccccCchhcccCCCCCEEECcCC
Confidence 4555555555555555444 3555666666666666
Q ss_pred cccc-CCCccccCCCCCCeEeccCCcccccCCCCCCCcccccccCCCCcccCcCCCcCCCccceeeecccccCChhhhhc
Q 002255 271 QLTG-IVPSSLVNLHSLAVVNLTNNLFQGQTPKFNSPVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVLAE 349 (947)
Q Consensus 271 ~l~g-~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~ 349 (947)
++++ .+|..+.++++|++|+|++|++++..+..+..+
T Consensus 135 ~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l------------------------------------------ 172 (276)
T 2z62_A 135 LIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVL------------------------------------------ 172 (276)
T ss_dssp CCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHH------------------------------------------
T ss_pred ccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhh------------------------------------------
Confidence 6654 246666667777777777776665433210000
Q ss_pred cCCCCCCCCCCCCCcccCCCCcee-EEEecCCCceeeccccccCCccCCeEeccCCcccccCCCcCCCCCCCCccccccc
Q 002255 350 SWKGNNPCNSDWKGVSCDAGGNIT-VVNLKNLGLSGTISSNFSRLTSLRQLMLSGNELTGTIPKELTTLPSLEMLDVSNN 428 (947)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~L~-~L~Ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ls~N 428 (947)
.....|. .|++++|.+++..+..+. ..+|+.|+|++|+|++..+..+..+++|+.|+|++|
T Consensus 173 -----------------~~L~~l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N 234 (276)
T 2z62_A 173 -----------------HQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTN 234 (276)
T ss_dssp -----------------HTCTTCCEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSS
T ss_pred -----------------hhccccceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCC
Confidence 0001122 577777777754444443 347888888888888554555788888999999999
Q ss_pred cccccCCC
Q 002255 429 HLFGKVPN 436 (947)
Q Consensus 429 ~l~g~iP~ 436 (947)
++++..|.
T Consensus 235 ~~~c~c~~ 242 (276)
T 2z62_A 235 PWDCSCPR 242 (276)
T ss_dssp CBCCCTTT
T ss_pred cccccCCc
Confidence 98888874
No 322
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.91 E-value=3.5e-27 Score=273.19 Aligned_cols=231 Identities=18% Similarity=0.196 Sum_probs=149.7
Q ss_pred cEEEEEecCCcccc----cCcccccCCCCCCEEEcccCcccCcCC-C-CCCCC----CCcEEecCCCcCCC----CCccc
Q 002255 66 RVTRIQIGGQNIEG----TLPKELNSLSSLTVLEVMKNKLTGQIP-S-LSGLS----SLQEVLFDDNNFTS----VPSDF 131 (947)
Q Consensus 66 ~v~~l~L~~~~l~g----~~p~~l~~l~~L~~L~L~~N~l~~~~p-~-~~~l~----~L~~L~L~~n~l~~----~~~~~ 131 (947)
+++.|+|++|++++ .++..+..+++|++|+|++|.++...+ . +..++ +|++|+|++|+++. ..+..
T Consensus 29 ~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~ 108 (461)
T 1z7x_W 29 QCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSST 108 (461)
T ss_dssp TCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHH
T ss_pred CccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHH
Confidence 56777777777764 345667777777778877777765332 2 22233 57778887777773 34566
Q ss_pred ccCCCCCcEEeccCCCCCCCCCccc-----ccCCCCCCeEeccCceeeecc----CcccCCCCCCCccEEEccCCcccCc
Q 002255 132 FKGLTSLQTISLDYNSFDSWVIPES-----LKDATGLQRFSANGANITGTI----PDFLGGDTIPGLMHLHLAFNFLQGP 202 (947)
Q Consensus 132 ~~~l~~L~~L~Ls~N~l~~~~~p~~-----~~~l~~L~~L~l~~n~l~~~~----p~~~~~~~l~~L~~L~Ls~N~l~~~ 202 (947)
+..+++|++|+|++|.+.. ..+.. ....++|++|++++|++++.. +..+. .+++|++|+|++|.+++.
T Consensus 109 l~~~~~L~~L~Ls~n~i~~-~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~--~~~~L~~L~L~~n~i~~~ 185 (461)
T 1z7x_W 109 LRTLPTLQELHLSDNLLGD-AGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLR--AKPDFKELTVSNNDINEA 185 (461)
T ss_dssp TTSCTTCCEEECCSSBCHH-HHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHH--HCTTCCEEECCSSBCHHH
T ss_pred HccCCceeEEECCCCcCch-HHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHh--hCCCCCEEECcCCCcchH
Confidence 7777778888887777643 11221 223556777888877777533 44444 457788888888877654
Q ss_pred CCcccc------CCCCceeeeccCCCCCCCCC-chhhhcCCCCCcEEEccCCcCcCCC-----CC-CCCCCCCCEEEccC
Q 002255 203 IPLSFG------KSSIQTLWLNGQKGDSKLNG-SVAVIQNMTSLTQLWLHGNSFTGPL-----PD-LSGLSSLQDFSVRD 269 (947)
Q Consensus 203 ~p~~~~------~~~L~~L~l~~n~~~~~~~~-~~~~~~~l~~L~~L~L~~N~l~~~~-----~~-~~~l~~L~~L~l~~ 269 (947)
.+..+. .++|+.|+|++|.+...... ....+..+++|++|+|++|.+++.. +. +..+++|++|++++
T Consensus 186 ~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~ 265 (461)
T 1z7x_W 186 GVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWE 265 (461)
T ss_dssp HHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTT
T ss_pred HHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcC
Confidence 444332 24778888887766543211 2344566788888888888876532 22 23577888888888
Q ss_pred CccccC----CCccccCCCCCCeEeccCCccccc
Q 002255 270 NQLTGI----VPSSLVNLHSLAVVNLTNNLFQGQ 299 (947)
Q Consensus 270 N~l~g~----~p~~l~~l~~L~~L~Ls~N~l~g~ 299 (947)
|+++.. ++..+.++++|++|+|++|.+++.
T Consensus 266 n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~ 299 (461)
T 1z7x_W 266 CGITAKGCGDLCRVLRAKESLKELSLAGNELGDE 299 (461)
T ss_dssp SCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHH
T ss_pred CCCCHHHHHHHHHHHhhCCCcceEECCCCCCchH
Confidence 888753 567777788888888888877643
No 323
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.90 E-value=6.7e-24 Score=226.77 Aligned_cols=42 Identities=14% Similarity=0.141 Sum_probs=28.9
Q ss_pred ceeEEEecCCCceeeccccccCCccCCeEeccCCcccccCCCcCCCCCC
Q 002255 371 NITVVNLKNLGLSGTISSNFSRLTSLRQLMLSGNELTGTIPKELTTLPS 419 (947)
Q Consensus 371 ~L~~L~Ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~ 419 (947)
+|+.|+|++|.+.+. +++|+.|+++.|+++|.+|.+++.+..
T Consensus 206 ~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 206 SLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp TCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSCBCG
T ss_pred CCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcccccCC
Confidence 445555555544432 446788888889999999988887664
No 324
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.90 E-value=6e-24 Score=227.15 Aligned_cols=225 Identities=22% Similarity=0.281 Sum_probs=135.4
Q ss_pred CCCEEEcccCcccCcCCCCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCCcccccCCCCCCeEecc
Q 002255 90 SLTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSAN 169 (947)
Q Consensus 90 ~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~ 169 (947)
++..+++..+.+...+ .+..+++|+.|++++|.++.++. +..+++|++|+|++|++.+ + ..+..+++|++|+++
T Consensus 20 ~l~~l~l~~~~~~~~~-~~~~l~~L~~L~l~~~~i~~~~~--l~~l~~L~~L~l~~n~l~~--~-~~l~~l~~L~~L~L~ 93 (272)
T 3rfs_A 20 ETIKANLKKKSVTDAV-TQNELNSIDQIIANNSDIKSVQG--IQYLPNVRYLALGGNKLHD--I-SALKELTNLTYLILT 93 (272)
T ss_dssp HHHHHHHTCSCTTSEE-CHHHHTTCCEEECTTSCCCCCTT--GGGCTTCCEEECTTSCCCC--C-GGGTTCTTCCEEECT
T ss_pred HHHHHHhcCccccccc-ccccccceeeeeeCCCCcccccc--cccCCCCcEEECCCCCCCC--c-hhhcCCCCCCEEECC
Confidence 4445556665555432 34456667777777776665442 5566666666666666643 1 244444455555555
Q ss_pred CceeeeccCcccCCCCCCCccEEEccCCcccCcCCccccCCCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccCCcC
Q 002255 170 GANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSF 249 (947)
Q Consensus 170 ~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l 249 (947)
+|.+++..+..+. . +++|++|+|++|++
T Consensus 94 ~n~l~~~~~~~~~--~--------------------------------------------------l~~L~~L~L~~n~l 121 (272)
T 3rfs_A 94 GNQLQSLPNGVFD--K--------------------------------------------------LTNLKELVLVENQL 121 (272)
T ss_dssp TSCCCCCCTTTTT--T--------------------------------------------------CTTCCEEECTTSCC
T ss_pred CCccCccChhHhc--C--------------------------------------------------CcCCCEEECCCCcC
Confidence 4444443333333 3 44555555555555
Q ss_pred cCCCCC-CCCCCCCCEEEccCCccccCCCccccCCCCCCeEeccCCcccccCCCCCCCcccccccCCCCcccCcCCCcCC
Q 002255 250 TGPLPD-LSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQTPKFNSPVRFDMAKGSNSFCLDDAGVACD 328 (947)
Q Consensus 250 ~~~~~~-~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (947)
++.++. +..+++|++|+|++|++++..+..+..+++|+.|+|++|++++..+..+
T Consensus 122 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~------------------------ 177 (272)
T 3rfs_A 122 QSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVF------------------------ 177 (272)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT------------------------
T ss_pred CccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHh------------------------
Confidence 544443 4455555555555555554444445555555666666555554333211
Q ss_pred CccceeeecccccCChhhhhccCCCCCCCCCCCCCcccCCCCceeEEEecCCCceeeccccccCCccCCeEeccCCcccc
Q 002255 329 GRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLSGTISSNFSRLTSLRQLMLSGNELTG 408 (947)
Q Consensus 329 ~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g 408 (947)
..+.+|+.|+|++|.+++..|..++++++|+.|+|++|.+.|
T Consensus 178 --------------------------------------~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 219 (272)
T 3rfs_A 178 --------------------------------------DKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 219 (272)
T ss_dssp --------------------------------------TTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred --------------------------------------cCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc
Confidence 112245566666666666666678899999999999999986
Q ss_pred cCCCcCCCCCCCCccccccccccccCCCCccce
Q 002255 409 TIPKELTTLPSLEMLDVSNNHLFGKVPNFRQNV 441 (947)
Q Consensus 409 ~iP~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~ 441 (947)
. +++|++|+++.|+++|.+|.+....
T Consensus 220 ~-------~~~l~~l~~~~n~~~g~ip~~~~~~ 245 (272)
T 3rfs_A 220 T-------CPGIRYLSEWINKHSGVVRNSAGSV 245 (272)
T ss_dssp C-------TTTTHHHHHHHHHTGGGBBCTTSCB
T ss_pred c-------CcHHHHHHHHHHhCCCcccCccccc
Confidence 5 4579999999999999999876543
No 325
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.90 E-value=8.8e-27 Score=269.88 Aligned_cols=311 Identities=18% Similarity=0.201 Sum_probs=200.8
Q ss_pred CcEEEEEecCCcccccCccccc-CCC----CCCEEEcccCcccC----cCC-CCCCCCCCcEEecCCCcCCCCCccc---
Q 002255 65 NRVTRIQIGGQNIEGTLPKELN-SLS----SLTVLEVMKNKLTG----QIP-SLSGLSSLQEVLFDDNNFTSVPSDF--- 131 (947)
Q Consensus 65 ~~v~~l~L~~~~l~g~~p~~l~-~l~----~L~~L~L~~N~l~~----~~p-~~~~l~~L~~L~L~~n~l~~~~~~~--- 131 (947)
.+++.|+|++|.+.+..+..+. .++ +|++|+|++|+++. .++ .+.++++|++|+|++|.++...+..
T Consensus 56 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 135 (461)
T 1z7x_W 56 PALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCE 135 (461)
T ss_dssp TTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHH
T ss_pred CCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHH
Confidence 4678888888887765444432 344 68888888888874 334 6778888888888888877433322
Q ss_pred --ccCCCCCcEEeccCCCCCCCC---CcccccCCCCCCeEeccCceeeeccCcccCC---CCCCCccEEEccCCcccCc-
Q 002255 132 --FKGLTSLQTISLDYNSFDSWV---IPESLKDATGLQRFSANGANITGTIPDFLGG---DTIPGLMHLHLAFNFLQGP- 202 (947)
Q Consensus 132 --~~~l~~L~~L~Ls~N~l~~~~---~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~---~~l~~L~~L~Ls~N~l~~~- 202 (947)
+..+++|++|+|++|++.... ++..+..+++|++|++++|.++...+..+.. ...++|++|+|++|.+++.
T Consensus 136 ~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~ 215 (461)
T 1z7x_W 136 GLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDN 215 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTH
T ss_pred HHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHH
Confidence 233567888888888875411 3556667788888888888877554444321 0145788888888888753
Q ss_pred ---CCccccC-CCCceeeeccCCCCCCCCCc--hhhhcCCCCCcEEEccCCcCcCC----CC-CCCCCCCCCEEEccCCc
Q 002255 203 ---IPLSFGK-SSIQTLWLNGQKGDSKLNGS--VAVIQNMTSLTQLWLHGNSFTGP----LP-DLSGLSSLQDFSVRDNQ 271 (947)
Q Consensus 203 ---~p~~~~~-~~L~~L~l~~n~~~~~~~~~--~~~~~~l~~L~~L~L~~N~l~~~----~~-~~~~l~~L~~L~l~~N~ 271 (947)
++..+.. .+|+.|++++|.+....... ...+..+++|+.|+|++|.++.. ++ .+..+++|++|++++|.
T Consensus 216 ~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~ 295 (461)
T 1z7x_W 216 CRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNE 295 (461)
T ss_dssp HHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCC
T ss_pred HHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCC
Confidence 3444432 67888888888665421111 11223477888888888888763 22 35567788888888888
Q ss_pred cccCCCccccC-----CCCCCeEeccCCcccccCCCCCCCcccccccCCCCcccCcCCCcCCCccceeeecccccCChhh
Q 002255 272 LTGIVPSSLVN-----LHSLAVVNLTNNLFQGQTPKFNSPVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAV 346 (947)
Q Consensus 272 l~g~~p~~l~~-----l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 346 (947)
+++..+..+.. .++|+.|+|++|.+++..... . +.
T Consensus 296 i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~---------------------------------l------~~- 335 (461)
T 1z7x_W 296 LGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSH---------------------------------F------SS- 335 (461)
T ss_dssp CHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHH---------------------------------H------HH-
T ss_pred CchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHH---------------------------------H------HH-
Confidence 87554444443 267888888888876431100 0 00
Q ss_pred hhccCCCCCCCCCCCCCcccCCCCceeEEEecCCCceeeccccccC-----CccCCeEeccCCcccc----cCCCcCCCC
Q 002255 347 LAESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLSGTISSNFSR-----LTSLRQLMLSGNELTG----TIPKELTTL 417 (947)
Q Consensus 347 l~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g~ip~~~~~-----l~~L~~L~Ls~N~l~g----~iP~~l~~l 417 (947)
.....++|+.|+|++|.+++..+..+.. .++|+.|+|++|++++ .+|..+..+
T Consensus 336 ------------------~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~ 397 (461)
T 1z7x_W 336 ------------------VLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLAN 397 (461)
T ss_dssp ------------------HHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHC
T ss_pred ------------------HHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhC
Confidence 0011235777888888777655544443 5678888888888875 677777777
Q ss_pred CCCCcccccccccccc
Q 002255 418 PSLEMLDVSNNHLFGK 433 (947)
Q Consensus 418 ~~L~~L~ls~N~l~g~ 433 (947)
++|++|+|++|++++.
T Consensus 398 ~~L~~L~l~~N~i~~~ 413 (461)
T 1z7x_W 398 HSLRELDLSNNCLGDA 413 (461)
T ss_dssp CCCCEEECCSSSCCHH
T ss_pred CCccEEECCCCCCCHH
Confidence 7888888888877654
No 326
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=8.3e-23 Score=215.53 Aligned_cols=190 Identities=20% Similarity=0.320 Sum_probs=129.6
Q ss_pred CCCCCceeEeCCCCcEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCcCCCCCcc
Q 002255 52 DPCKWKHIQCSPSNRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNFTSVPSD 130 (947)
Q Consensus 52 d~C~w~gv~C~~~~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~l~~~~~~ 130 (947)
+||.|.|++|.. ..+.+++++++++ .+|..+. ++|+.|+|++|++++..+ .|.++++|++|+|++|+++++++.
T Consensus 3 ~Cp~~~gC~C~~--~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 77 (251)
T 3m19_A 3 TCETVTGCTCNE--GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAG 77 (251)
T ss_dssp -CHHHHSSEEEG--GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTT
T ss_pred cCCCCCceEcCC--CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHh
Confidence 688999999953 3457899999888 7777665 688999999999888777 688888888888888888888888
Q ss_pred cccCCCCCcEEeccCCCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCcccCcCCccccCC
Q 002255 131 FFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKS 210 (947)
Q Consensus 131 ~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 210 (947)
.|..+++|++|+|++|++.. ..+..+..+++|++|+|++|++++..+..+.
T Consensus 78 ~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~---------------------------- 128 (251)
T 3m19_A 78 VFDDLTELGTLGLANNQLAS-LPLGVFDHLTQLDKLYLGGNQLKSLPSGVFD---------------------------- 128 (251)
T ss_dssp TTTTCTTCCEEECTTSCCCC-CCTTTTTTCTTCCEEECCSSCCCCCCTTTTT----------------------------
T ss_pred HhccCCcCCEEECCCCcccc-cChhHhcccCCCCEEEcCCCcCCCcChhHhc----------------------------
Confidence 88888888888888888764 3334444444444444444444433333232
Q ss_pred CCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccCCcCcCCCC-CCCCCCCCCEEEccCCccccCCCccccCCCCCCeE
Q 002255 211 SIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPLP-DLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVV 289 (947)
Q Consensus 211 ~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L 289 (947)
++++|+.|+|++|+|++.++ .+..+++|++|+|++|+|++..+..+..+++|+.|
T Consensus 129 ------------------------~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 184 (251)
T 3m19_A 129 ------------------------RLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTI 184 (251)
T ss_dssp ------------------------TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEE
T ss_pred ------------------------cCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEE
Confidence 24555555666665555555 25556666666666666665555566666666666
Q ss_pred eccCCccccc
Q 002255 290 NLTNNLFQGQ 299 (947)
Q Consensus 290 ~Ls~N~l~g~ 299 (947)
+|++|++++.
T Consensus 185 ~l~~N~~~c~ 194 (251)
T 3m19_A 185 TLFGNQFDCS 194 (251)
T ss_dssp ECCSCCBCTT
T ss_pred EeeCCceeCC
Confidence 6666666654
No 327
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.89 E-value=1.9e-22 Score=217.19 Aligned_cols=206 Identities=29% Similarity=0.333 Sum_probs=127.6
Q ss_pred CCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCC
Q 002255 107 SLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTI 186 (947)
Q Consensus 107 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l 186 (947)
.+.++++|+++++++|.++.+|+... ++|++|+|++|++.. ..+..+.++++|++|+|++|.+++..+. + .+
T Consensus 5 ~~~~l~~l~~l~~~~~~l~~ip~~~~---~~l~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~--~l 76 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLTALPPDLP---KDTTILHLSENLLYT-FSLATLMPYTRLTQLNLDRAELTKLQVD--G--TL 76 (290)
T ss_dssp EEECSTTCCEEECTTSCCSSCCSCCC---TTCCEEECTTSCCSE-EEGGGGTTCTTCCEEECTTSCCCEEECC--S--CC
T ss_pred cccccCCccEEECCCCCCCcCCCCCC---CCCCEEEcCCCcCCc-cCHHHhhcCCCCCEEECCCCccCcccCC--C--CC
Confidence 35667777788888877777776533 567777777777754 3455666666666666666666543322 2 35
Q ss_pred CCccEEEccCCcccCcCCccccCCCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccCCcCcCCCCC-CCCCCCCCEE
Q 002255 187 PGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPLPD-LSGLSSLQDF 265 (947)
Q Consensus 187 ~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L 265 (947)
++|++|+|++|+++ .+|..+ .++++|+.|+|++|+|++.++. +.++++|++|
T Consensus 77 ~~L~~L~Ls~N~l~-~l~~~~--------------------------~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L 129 (290)
T 1p9a_G 77 PVLGTLDLSHNQLQ-SLPLLG--------------------------QTLPALTVLDVSFNRLTSLPLGALRGLGELQEL 129 (290)
T ss_dssp TTCCEEECCSSCCS-SCCCCT--------------------------TTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEE
T ss_pred CcCCEEECCCCcCC-cCchhh--------------------------ccCCCCCEEECCCCcCcccCHHHHcCCCCCCEE
Confidence 55566666655555 333322 1245555555555555554442 4445555555
Q ss_pred EccCCccccCCCccccCCCCCCeEeccCCcccccCCCCCCCcccccccCCCCcccCcCCCcCCCccceeeecccccCChh
Q 002255 266 SVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQTPKFNSPVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPA 345 (947)
Q Consensus 266 ~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 345 (947)
+|++|+|++..+..|..+++|+.|+|++|+
T Consensus 130 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-------------------------------------------------- 159 (290)
T 1p9a_G 130 YLKGNELKTLPPGLLTPTPKLEKLSLANNN-------------------------------------------------- 159 (290)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECTTSC--------------------------------------------------
T ss_pred ECCCCCCCccChhhcccccCCCEEECCCCc--------------------------------------------------
Confidence 555555554444444445555555555554
Q ss_pred hhhccCCCCCCCCCCCCCcccCCCCceeEEEecCCCceeeccccccCCccCCeEeccCCcccccCCCcCCCCCCCCcccc
Q 002255 346 VLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLSGTISSNFSRLTSLRQLMLSGNELTGTIPKELTTLPSLEMLDV 425 (947)
Q Consensus 346 ~l~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~l 425 (947)
|++..+..|..+++|+.|+|++|+|+ .+|..+..+.+|+.|+|
T Consensus 160 ------------------------------------l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L 202 (290)
T 1p9a_G 160 ------------------------------------LTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFL 202 (290)
T ss_dssp ------------------------------------CSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEEC
T ss_pred ------------------------------------CCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEe
Confidence 44333345677888999999999998 88888888888999999
Q ss_pred ccccccccC
Q 002255 426 SNNHLFGKV 434 (947)
Q Consensus 426 s~N~l~g~i 434 (947)
++|++.+..
T Consensus 203 ~~Np~~C~c 211 (290)
T 1p9a_G 203 HGNPWLCNC 211 (290)
T ss_dssp CSCCBCCSG
T ss_pred CCCCccCcC
Confidence 988886643
No 328
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.89 E-value=2e-22 Score=217.02 Aligned_cols=202 Identities=23% Similarity=0.255 Sum_probs=168.1
Q ss_pred eCCCCcEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCcCCCCCcccccCCCCCc
Q 002255 61 CSPSNRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQ 139 (947)
Q Consensus 61 C~~~~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 139 (947)
|..-..++++++++++++ .+|..+. ++|+.|+|++|.+++..+ .|.++++|++|+|++|.++++++. ..+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCC
Confidence 333456788888888888 6776664 688899999998888776 688889999999999998887664 6788899
Q ss_pred EEeccCCCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCcccCcCCccccCCCCceeeecc
Q 002255 140 TISLDYNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNG 219 (947)
Q Consensus 140 ~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~l~~ 219 (947)
+|+|++|++.. +|..+..+++|++|+|++|++++..|..|. .+++|++|+|++|++++..+..|
T Consensus 81 ~L~Ls~N~l~~--l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~------------ 144 (290)
T 1p9a_G 81 TLDLSHNQLQS--LPLLGQTLPALTVLDVSFNRLTSLPLGALR--GLGELQELYLKGNELKTLPPGLL------------ 144 (290)
T ss_dssp EEECCSSCCSS--CCCCTTTCTTCCEEECCSSCCCCCCSSTTT--TCTTCCEEECTTSCCCCCCTTTT------------
T ss_pred EEECCCCcCCc--CchhhccCCCCCEEECCCCcCcccCHHHHc--CCCCCCEEECCCCCCCccChhhc------------
Confidence 99999998864 788888888889999999888877777776 68888888888888886554443
Q ss_pred CCCCCCCCCchhhhcCCCCCcEEEccCCcCcCCCCC-CCCCCCCCEEEccCCccccCCCccccCCCCCCeEeccCCcccc
Q 002255 220 QKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPLPD-LSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQG 298 (947)
Q Consensus 220 n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g 298 (947)
..+++|+.|+|++|+|+..++. +..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|++..
T Consensus 145 --------------~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 145 --------------TPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp --------------TTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred --------------ccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 3589999999999999987775 678999999999999999 789999999999999999999863
No 329
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.89 E-value=7.3e-22 Score=210.76 Aligned_cols=205 Identities=21% Similarity=0.274 Sum_probs=120.3
Q ss_pred CCcEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEE
Q 002255 113 SLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHL 192 (947)
Q Consensus 113 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L 192 (947)
+++++++++++++.+|.... ++|++|+|++|++.. ..+..+.++++|++|++++|.++...+..|. .+++|++|
T Consensus 17 ~~~~l~~~~~~l~~ip~~~~---~~l~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~--~l~~L~~L 90 (270)
T 2o6q_A 17 NKNSVDCSSKKLTAIPSNIP---ADTKKLDLQSNKLSS-LPSKAFHRLTKLRLLYLNDNKLQTLPAGIFK--ELKNLETL 90 (270)
T ss_dssp TTTEEECTTSCCSSCCSCCC---TTCSEEECCSSCCSC-CCTTSSSSCTTCCEEECCSSCCSCCCTTTTS--SCTTCCEE
T ss_pred CCCEEEccCCCCCccCCCCC---CCCCEEECcCCCCCe-eCHHHhcCCCCCCEEECCCCccCeeChhhhc--CCCCCCEE
Confidence 46677777777777665422 467777777777754 3334555566666666665555533333333 34555555
Q ss_pred EccCCcccCcCCccccCCCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccCCcCcCCCCC-CCCCCCCCEEEccCCc
Q 002255 193 HLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPLPD-LSGLSSLQDFSVRDNQ 271 (947)
Q Consensus 193 ~Ls~N~l~~~~p~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~l~~N~ 271 (947)
+|++|++++..+..+ .++++|+.|+|++|++++..+. +..+++|++|+|++|+
T Consensus 91 ~l~~n~l~~~~~~~~--------------------------~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 144 (270)
T 2o6q_A 91 WVTDNKLQALPIGVF--------------------------DQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNE 144 (270)
T ss_dssp ECCSSCCCCCCTTTT--------------------------TTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred ECCCCcCCcCCHhHc--------------------------ccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCc
Confidence 555555553222222 1244455555555555544442 3444445555555554
Q ss_pred cccCCCccccCCCCCCeEeccCCcccccCCCCCCCcccccccCCCCcccCcCCCcCCCccceeeecccccCChhhhhccC
Q 002255 272 LTGIVPSSLVNLHSLAVVNLTNNLFQGQTPKFNSPVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVLAESW 351 (947)
Q Consensus 272 l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~ 351 (947)
|++..+..|..+++
T Consensus 145 l~~~~~~~~~~l~~------------------------------------------------------------------ 158 (270)
T 2o6q_A 145 LQSLPKGVFDKLTS------------------------------------------------------------------ 158 (270)
T ss_dssp CCCCCTTTTTTCTT------------------------------------------------------------------
T ss_pred CCccCHhHccCCcc------------------------------------------------------------------
Confidence 44333333444444
Q ss_pred CCCCCCCCCCCCcccCCCCceeEEEecCCCceeeccccccCCccCCeEeccCCcccccCCCcCCCCCCCCcccccccccc
Q 002255 352 KGNNPCNSDWKGVSCDAGGNITVVNLKNLGLSGTISSNFSRLTSLRQLMLSGNELTGTIPKELTTLPSLEMLDVSNNHLF 431 (947)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ls~N~l~ 431 (947)
|+.|+|++|.+++..+..|.++++|+.|+|++|+|++..+..+..+++|+.|+|++|++.
T Consensus 159 --------------------L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 159 --------------------LKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp --------------------CCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred --------------------cceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCee
Confidence 445555555555444556777888999999999998555556888899999999999987
Q ss_pred ccCC
Q 002255 432 GKVP 435 (947)
Q Consensus 432 g~iP 435 (947)
+..+
T Consensus 219 c~c~ 222 (270)
T 2o6q_A 219 CTCN 222 (270)
T ss_dssp CSSS
T ss_pred CCCc
Confidence 7665
No 330
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.88 E-value=1.8e-23 Score=228.04 Aligned_cols=203 Identities=18% Similarity=0.211 Sum_probs=136.0
Q ss_pred CCCcEEeccCCCCCCCCCcccc--cCCCCCCeEeccCceeeeccC----cccCCCCCCCccEEEccCCcccCcCCccccC
Q 002255 136 TSLQTISLDYNSFDSWVIPESL--KDATGLQRFSANGANITGTIP----DFLGGDTIPGLMHLHLAFNFLQGPIPLSFGK 209 (947)
Q Consensus 136 ~~L~~L~Ls~N~l~~~~~p~~~--~~l~~L~~L~l~~n~l~~~~p----~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 209 (947)
++|++|+|++|++.+ ..|..+ ..+++|++|+|++|.+++..+ ..+. .+++|++|+|++|++++..+..++
T Consensus 91 ~~L~~L~l~~n~l~~-~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~--~~~~L~~L~Ls~n~l~~~~~~~~~- 166 (310)
T 4glp_A 91 SRLKELTLEDLKITG-TMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQW--LKPGLKVLSIAQAHSPAFSCEQVR- 166 (310)
T ss_dssp SCCCEEEEESCCCBS-CCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTT--BCSCCCEEEEECCSSCCCCTTSCC-
T ss_pred CceeEEEeeCCEecc-chhhhhhhccCCCCCEEEeecccccchhhhhHHHHhh--hccCCCEEEeeCCCcchhhHHHhc-
Confidence 345555555555543 344444 555555555555555554433 1222 467777788888777766555543
Q ss_pred CCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccCCcCcC---CCCC--CCCCCCCCEEEccCCccccCCCc----cc
Q 002255 210 SSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTG---PLPD--LSGLSSLQDFSVRDNQLTGIVPS----SL 280 (947)
Q Consensus 210 ~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~---~~~~--~~~l~~L~~L~l~~N~l~g~~p~----~l 280 (947)
++++|++|+|++|++.+ ..+. +..+++|++|+|++|+++ .++. .+
T Consensus 167 -------------------------~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~ 220 (310)
T 4glp_A 167 -------------------------AFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALA 220 (310)
T ss_dssp -------------------------CCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHH
T ss_pred -------------------------cCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHH
Confidence 36777778888887765 2222 356788888888888886 3333 25
Q ss_pred cCCCCCCeEeccCCcccccCCCCCCCcccccccCCCCcccCcCCCcCCCccceeeecccccCChhhhhccCCCCCCCCCC
Q 002255 281 VNLHSLAVVNLTNNLFQGQTPKFNSPVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSD 360 (947)
Q Consensus 281 ~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ 360 (947)
.++++|++|+|++|++++.+|..+..
T Consensus 221 ~~l~~L~~L~Ls~N~l~~~~p~~~~~------------------------------------------------------ 246 (310)
T 4glp_A 221 AAGVQPHSLDLSHNSLRATVNPSAPR------------------------------------------------------ 246 (310)
T ss_dssp HHTCCCSSEECTTSCCCCCCCSCCSS------------------------------------------------------
T ss_pred hcCCCCCEEECCCCCCCccchhhHHh------------------------------------------------------
Confidence 67788888888888888776643211
Q ss_pred CCCcccCCCCceeEEEecCCCceeeccccccCCccCCeEeccCCcccccCCCcCCCCCCCCccccccccccc
Q 002255 361 WKGVSCDAGGNITVVNLKNLGLSGTISSNFSRLTSLRQLMLSGNELTGTIPKELTTLPSLEMLDVSNNHLFG 432 (947)
Q Consensus 361 ~~~~~~~~~~~L~~L~Ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ls~N~l~g 432 (947)
+...++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|++ +|. +..+++|+.|+|++|+|+.
T Consensus 247 -----~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~-~~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 247 -----CMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNR-APQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp -----CCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCS-CCC-TTSCCCCSCEECSSTTTSC
T ss_pred -----ccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCC-Cch-hhhCCCccEEECcCCCCCC
Confidence 111246888888888888 6787775 799999999999995 454 6788999999999999864
No 331
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=3.3e-22 Score=217.51 Aligned_cols=59 Identities=29% Similarity=0.467 Sum_probs=27.6
Q ss_pred CCCCcEEEccCCcCcCCCCCCCCCCCCCEEEccCCccccCCCccccCCCCCCeEeccCCccc
Q 002255 236 MTSLTQLWLHGNSFTGPLPDLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQ 297 (947)
Q Consensus 236 l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~ 297 (947)
+++|+.|+|++|.+++..+ +..+++|++|+|++|++++.. .+..+++|+.|+|++|+++
T Consensus 172 l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 172 LSKLTTLKADDNKISDISP-LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp CTTCCEEECCSSCCCCCGG-GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEE
T ss_pred CCCCCEEECCCCccCcChh-hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeee
Confidence 4445555555555543322 444445555555555554322 1444455555555555444
No 332
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.88 E-value=1.5e-24 Score=239.97 Aligned_cols=211 Identities=15% Similarity=0.245 Sum_probs=151.5
Q ss_pred CCCCCceeEeCCCCcEEEEEecCCcccccCcccccCC--CCCCEEEcccCcccCcCCCCCCCCCCcEEecCCCcCCCC-C
Q 002255 52 DPCKWKHIQCSPSNRVTRIQIGGQNIEGTLPKELNSL--SSLTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSV-P 128 (947)
Q Consensus 52 d~C~w~gv~C~~~~~v~~l~L~~~~l~g~~p~~l~~l--~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~n~l~~~-~ 128 (947)
-|.+|.++.|+ ...++.++++++++. +..+..+ ++++.|++++|.+.+.++.+.++++|++|+|++|.+++. .
T Consensus 35 vc~~W~~~~~~-~~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~ 110 (336)
T 2ast_B 35 VCKRWYRLASD-ESLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTL 110 (336)
T ss_dssp SCHHHHHHHTC-STTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHH
T ss_pred HHHHHHHHhcC-chhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHH
Confidence 45579999886 346889999998877 5567777 899999999999999888888889999999999988764 6
Q ss_pred cccccCCCCCcEEeccCCCCCCCCCcccccCCCCCCeEeccCc-eeeec-cCcccCCCCCCCccEEEccCC-cccCc-CC
Q 002255 129 SDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGA-NITGT-IPDFLGGDTIPGLMHLHLAFN-FLQGP-IP 204 (947)
Q Consensus 129 ~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n-~l~~~-~p~~~~~~~l~~L~~L~Ls~N-~l~~~-~p 204 (947)
+..+..+++|++|+|++|++.. ..+..++.+++|++|++++| .+++. ++..+. .+++|++|+|++| .+++. ++
T Consensus 111 ~~~~~~~~~L~~L~L~~~~l~~-~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~--~~~~L~~L~l~~~~~l~~~~~~ 187 (336)
T 2ast_B 111 HGILSQCSKLQNLSLEGLRLSD-PIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLS--SCSRLDELNLSWCFDFTEKHVQ 187 (336)
T ss_dssp HHHHTTBCCCSEEECTTCBCCH-HHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHH--HCTTCCEEECCCCTTCCHHHHH
T ss_pred HHHHhhCCCCCEEeCcCcccCH-HHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHh--cCCCCCEEcCCCCCCcChHHHH
Confidence 6667888888888888888754 46677777888888888887 56653 555554 5677777777777 66642 22
Q ss_pred ccccCCCCceeeeccCCCCCCCCCchhhhcCCC-CCcEEEccCC--cCc-CCCC-CCCCCCCCCEEEccCCc-cccCCCc
Q 002255 205 LSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMT-SLTQLWLHGN--SFT-GPLP-DLSGLSSLQDFSVRDNQ-LTGIVPS 278 (947)
Q Consensus 205 ~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~-~L~~L~L~~N--~l~-~~~~-~~~~l~~L~~L~l~~N~-l~g~~p~ 278 (947)
.. +.+++ +|++|+|++| .++ +.++ .+..+++|+.|++++|. +++..+.
T Consensus 188 ~~--------------------------~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~ 241 (336)
T 2ast_B 188 VA--------------------------VAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQ 241 (336)
T ss_dssp HH--------------------------HHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGG
T ss_pred HH--------------------------HHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHH
Confidence 22 33466 7777777777 343 2222 24456677777777776 5556666
Q ss_pred cccCCCCCCeEeccCCc
Q 002255 279 SLVNLHSLAVVNLTNNL 295 (947)
Q Consensus 279 ~l~~l~~L~~L~Ls~N~ 295 (947)
.+.++++|+.|+|++|.
T Consensus 242 ~l~~l~~L~~L~l~~~~ 258 (336)
T 2ast_B 242 EFFQLNYLQHLSLSRCY 258 (336)
T ss_dssp GGGGCTTCCEEECTTCT
T ss_pred HHhCCCCCCEeeCCCCC
Confidence 66667777777776664
No 333
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.87 E-value=3.1e-22 Score=209.55 Aligned_cols=185 Identities=17% Similarity=0.239 Sum_probs=133.9
Q ss_pred cCcccccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCc-CCCCCcccccCCCCCcEEeccC-CCCCCCCCccc
Q 002255 80 TLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNN-FTSVPSDFFKGLTSLQTISLDY-NSFDSWVIPES 156 (947)
Q Consensus 80 ~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~~p~~ 156 (947)
.+|. +. ++|++|+|++|++++.++ .|.++++|++|+|++|+ ++.+++..|..+++|++|+|++ |++.. ..+..
T Consensus 25 ~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~-i~~~~ 100 (239)
T 2xwt_C 25 RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTY-IDPDA 100 (239)
T ss_dssp SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCE-ECTTS
T ss_pred ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeE-cCHHH
Confidence 6666 43 489999999999988777 78889999999999996 8888888888999999999998 88865 44567
Q ss_pred ccCCCCCCeEeccCceeeeccCcccCCCCCCCcc---EEEccCC-cccCcCCccccCCCCceeeeccCCCCCCCCCchhh
Q 002255 157 LKDATGLQRFSANGANITGTIPDFLGGDTIPGLM---HLHLAFN-FLQGPIPLSFGKSSIQTLWLNGQKGDSKLNGSVAV 232 (947)
Q Consensus 157 ~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~---~L~Ls~N-~l~~~~p~~~~~~~L~~L~l~~n~~~~~~~~~~~~ 232 (947)
|.++++|++|++++|.+++ +|. +. .+++|+ +|+|++| ++++..+..|.
T Consensus 101 f~~l~~L~~L~l~~n~l~~-lp~-~~--~l~~L~~L~~L~l~~N~~l~~i~~~~~~------------------------ 152 (239)
T 2xwt_C 101 LKELPLLKFLGIFNTGLKM-FPD-LT--KVYSTDIFFILEITDNPYMTSIPVNAFQ------------------------ 152 (239)
T ss_dssp EECCTTCCEEEEEEECCCS-CCC-CT--TCCBCCSEEEEEEESCTTCCEECTTTTT------------------------
T ss_pred hCCCCCCCEEeCCCCCCcc-ccc-cc--cccccccccEEECCCCcchhhcCccccc------------------------
Confidence 7888888888888888875 565 44 466666 8888888 77754443333
Q ss_pred hcCCCCCc-EEEccCCcCcCCCCCCCCCCCCCEEEccCCc-cccCCCccccCC-CCCCeEeccCCcccc
Q 002255 233 IQNMTSLT-QLWLHGNSFTGPLPDLSGLSSLQDFSVRDNQ-LTGIVPSSLVNL-HSLAVVNLTNNLFQG 298 (947)
Q Consensus 233 ~~~l~~L~-~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~-l~g~~p~~l~~l-~~L~~L~Ls~N~l~g 298 (947)
++++|+ .|+|++|+++..++.....++|+.|+|++|+ +++..+..|..+ ++|+.|+|++|++++
T Consensus 153 --~l~~L~~~L~l~~n~l~~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~ 219 (239)
T 2xwt_C 153 --GLCNETLTLKLYNNGFTSVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA 219 (239)
T ss_dssp --TTBSSEEEEECCSCCCCEECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC
T ss_pred --chhcceeEEEcCCCCCcccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcccc
Confidence 366677 7777777776444433333667777777773 665555566666 677777777776653
No 334
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.87 E-value=5.2e-24 Score=237.78 Aligned_cols=80 Identities=13% Similarity=0.118 Sum_probs=40.2
Q ss_pred EEecCCcccccCcccccCCCCCCEEEcccCcccCcCC-----CCCCCC-CCcEEecCCCcCCCCCcccccCC-----CCC
Q 002255 70 IQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-----SLSGLS-SLQEVLFDDNNFTSVPSDFFKGL-----TSL 138 (947)
Q Consensus 70 l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p-----~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l-----~~L 138 (947)
.+|+.++++|.+|..+...++|++|+|++|.+++..+ .|.+++ +|++|+|++|+++...+..+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 3455555555555544444445555555555554432 244444 45555555555555444444333 455
Q ss_pred cEEeccCCCCC
Q 002255 139 QTISLDYNSFD 149 (947)
Q Consensus 139 ~~L~Ls~N~l~ 149 (947)
++|+|++|++.
T Consensus 83 ~~L~Ls~n~l~ 93 (362)
T 3goz_A 83 TSLNLSGNFLS 93 (362)
T ss_dssp CEEECCSSCGG
T ss_pred cEEECcCCcCC
Confidence 55555555543
No 335
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.87 E-value=2.3e-22 Score=219.29 Aligned_cols=227 Identities=17% Similarity=0.146 Sum_probs=134.6
Q ss_pred cEEEEEecCCcccccCcc---cccCCCCCCEEEcccCcccCcCC-CC--CCCCCCcEEecCCCcCCCCCc----ccccCC
Q 002255 66 RVTRIQIGGQNIEGTLPK---ELNSLSSLTVLEVMKNKLTGQIP-SL--SGLSSLQEVLFDDNNFTSVPS----DFFKGL 135 (947)
Q Consensus 66 ~v~~l~L~~~~l~g~~p~---~l~~l~~L~~L~L~~N~l~~~~p-~~--~~l~~L~~L~L~~n~l~~~~~----~~~~~l 135 (947)
++..+.+.++.++...-. .+..+++|++|+|++|.+++.+| .+ ..+++|++|+|++|++++..+ ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 355555555554321100 12223456666666666666555 34 556666666666666665333 223356
Q ss_pred CCCcEEeccCCCCCCCCCcccccCCCCCCeEeccCceeeec--cCcccCCCCCCCccEEEccCCcccCcCCc---c-cc-
Q 002255 136 TSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGANITGT--IPDFLGGDTIPGLMHLHLAFNFLQGPIPL---S-FG- 208 (947)
Q Consensus 136 ~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~--~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~---~-~~- 208 (947)
++|++|+|++|++.. ..+..++.+++|++|+|++|++.+. ++.......+++|++|+|++|+++. ++. . +.
T Consensus 145 ~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~ 222 (310)
T 4glp_A 145 PGLKVLSIAQAHSPA-FSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAA 222 (310)
T ss_dssp SCCCEEEEECCSSCC-CCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHH
T ss_pred cCCCEEEeeCCCcch-hhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhc
Confidence 666666666666643 4445666666666666666665442 2111110145666666666666652 221 1 11
Q ss_pred CCCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccCCcCcCCCCCCCCCCCCCEEEccCCccccCCCccccCCCCCCe
Q 002255 209 KSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPLPDLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAV 288 (947)
Q Consensus 209 ~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~ 288 (947)
..+|+.|+|++|.+..........+..+++|++|+|++|+|+..+..+. ++|++|+|++|+|++. |. +..+++|+.
T Consensus 223 l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~ 298 (310)
T 4glp_A 223 GVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDN 298 (310)
T ss_dssp TCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCSCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSC
T ss_pred CCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCchhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccE
Confidence 1456666666666555433332223335799999999999995544553 7999999999999964 44 678899999
Q ss_pred EeccCCcccc
Q 002255 289 VNLTNNLFQG 298 (947)
Q Consensus 289 L~Ls~N~l~g 298 (947)
|+|++|+|+.
T Consensus 299 L~L~~N~l~~ 308 (310)
T 4glp_A 299 LTLDGNPFLV 308 (310)
T ss_dssp EECSSTTTSC
T ss_pred EECcCCCCCC
Confidence 9999999874
No 336
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.87 E-value=1.1e-21 Score=205.35 Aligned_cols=195 Identities=17% Similarity=0.185 Sum_probs=169.9
Q ss_pred CcEEEEEecCCcccccCcccccCCCCCCEEEcccCc-ccCcCC-CCCCCCCCcEEecCC-CcCCCCCcccccCCCCCcEE
Q 002255 65 NRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNK-LTGQIP-SLSGLSSLQEVLFDD-NNFTSVPSDFFKGLTSLQTI 141 (947)
Q Consensus 65 ~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~-l~~~~p-~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L 141 (947)
..++.|+|++|++++..+..|.++++|++|+|++|+ ++...+ .|.++++|++|+|++ |+++++++..|..+++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 479999999999998777789999999999999997 887777 799999999999999 99999999999999999999
Q ss_pred eccCCCCCCCCCcccccCCCCCC---eEeccCc-eeeeccCcccCCCCCCCcc-EEEccCCcccCcCCccccCCCCceee
Q 002255 142 SLDYNSFDSWVIPESLKDATGLQ---RFSANGA-NITGTIPDFLGGDTIPGLM-HLHLAFNFLQGPIPLSFGKSSIQTLW 216 (947)
Q Consensus 142 ~Ls~N~l~~~~~p~~~~~l~~L~---~L~l~~n-~l~~~~p~~~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~~~L~~L~ 216 (947)
+|++|++.+ +|. +..+++|+ +|++++| ++++..+..|. .+++|+ +|+|++|+++ .+|....
T Consensus 111 ~l~~n~l~~--lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~--~l~~L~~~L~l~~n~l~-~i~~~~~-------- 176 (239)
T 2xwt_C 111 GIFNTGLKM--FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQ--GLCNETLTLKLYNNGFT-SVQGYAF-------- 176 (239)
T ss_dssp EEEEECCCS--CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTT--TTBSSEEEEECCSCCCC-EECTTTT--------
T ss_pred eCCCCCCcc--ccc-cccccccccccEEECCCCcchhhcCccccc--chhcceeEEEcCCCCCc-ccCHhhc--------
Confidence 999999976 676 88888888 9999999 99977777787 689999 9999999998 5654321
Q ss_pred eccCCCCCCCCCchhhhcCCCCCcEEEccCCc-CcCCCCC-CCCC-CCCCEEEccCCccccCCCccccCCCCCCeEeccC
Q 002255 217 LNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNS-FTGPLPD-LSGL-SSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTN 293 (947)
Q Consensus 217 l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~-~~~l-~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~ 293 (947)
. .++|+.|+|++|+ +++..+. +.++ ++|+.|++++|+|+ .+|.. .+++|+.|++++
T Consensus 177 -----------------~-~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~-~l~~~--~~~~L~~L~l~~ 235 (239)
T 2xwt_C 177 -----------------N-GTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT-ALPSK--GLEHLKELIARN 235 (239)
T ss_dssp -----------------T-TCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCC-CCCCT--TCTTCSEEECTT
T ss_pred -----------------C-CCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccc-cCChh--HhccCceeeccC
Confidence 1 3789999999995 9877664 7788 99999999999998 45554 688999999987
Q ss_pred C
Q 002255 294 N 294 (947)
Q Consensus 294 N 294 (947)
+
T Consensus 236 ~ 236 (239)
T 2xwt_C 236 T 236 (239)
T ss_dssp C
T ss_pred c
Confidence 6
No 337
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.87 E-value=1.3e-24 Score=245.31 Aligned_cols=196 Identities=17% Similarity=0.174 Sum_probs=124.6
Q ss_pred cCcccccCCCCCCEEEcccCcccCcCC-----CCCCCCCCcEEecCCCcCC---CCCcccc-------cCCCCCcEEecc
Q 002255 80 TLPKELNSLSSLTVLEVMKNKLTGQIP-----SLSGLSSLQEVLFDDNNFT---SVPSDFF-------KGLTSLQTISLD 144 (947)
Q Consensus 80 ~~p~~l~~l~~L~~L~L~~N~l~~~~p-----~~~~l~~L~~L~L~~n~l~---~~~~~~~-------~~l~~L~~L~Ls 144 (947)
.++..+..+++|+.|+|++|.++...+ .+..+++|++|+|++|.+. +..|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 566677788888888888888876532 3677888888888886544 3333323 567778888888
Q ss_pred CCCCCCC---CCcccccCCCCCCeEeccCceeeeccCcccCCC--CC---------CCccEEEccCCccc-CcCCccccC
Q 002255 145 YNSFDSW---VIPESLKDATGLQRFSANGANITGTIPDFLGGD--TI---------PGLMHLHLAFNFLQ-GPIPLSFGK 209 (947)
Q Consensus 145 ~N~l~~~---~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~--~l---------~~L~~L~Ls~N~l~-~~~p~~~~~ 209 (947)
+|.+... .+|..+.++++|++|+|++|.+++..+..+... .+ ++|++|+|++|+++ +.++.
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~---- 178 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKE---- 178 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHH----
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHH----
Confidence 8877531 245566777777777777777754433333200 11 56666666666665 22221
Q ss_pred CCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccCCcCc--C---CCC-CCCCCCCCCEEEccCCccc----cCCCcc
Q 002255 210 SSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFT--G---PLP-DLSGLSSLQDFSVRDNQLT----GIVPSS 279 (947)
Q Consensus 210 ~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~--~---~~~-~~~~l~~L~~L~l~~N~l~----g~~p~~ 279 (947)
....+..+++|+.|+|++|.++ | ..+ .+..+++|++|+|++|.|+ +.+|..
T Consensus 179 -------------------l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~ 239 (386)
T 2ca6_A 179 -------------------WAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIA 239 (386)
T ss_dssp -------------------HHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHH
T ss_pred -------------------HHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHH
Confidence 0122445677777777777776 2 334 5666777777777777775 456667
Q ss_pred ccCCCCCCeEeccCCcccc
Q 002255 280 LVNLHSLAVVNLTNNLFQG 298 (947)
Q Consensus 280 l~~l~~L~~L~Ls~N~l~g 298 (947)
+..+++|++|+|++|++++
T Consensus 240 l~~~~~L~~L~L~~n~i~~ 258 (386)
T 2ca6_A 240 LKSWPNLRELGLNDCLLSA 258 (386)
T ss_dssp GGGCTTCCEEECTTCCCCH
T ss_pred HccCCCcCEEECCCCCCch
Confidence 7777777777777777653
No 338
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.86 E-value=2.6e-22 Score=214.69 Aligned_cols=154 Identities=14% Similarity=0.053 Sum_probs=121.3
Q ss_pred HHHHHHhcCCCcCceecccCceEEEEEEEcCCcEEEEEEecccccCh----------------HHHHHHHHHHHHHHcCC
Q 002255 583 QVLRNVTNNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSE----------------KGFAEFKSEIAVLTKVR 646 (947)
Q Consensus 583 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~----------------~~~~~~~~E~~~l~~l~ 646 (947)
..+..-...|.+.+.||+|+||.||+|...+|+.||||+++...... .....+.+|++++++++
T Consensus 83 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~ 162 (282)
T 1zar_A 83 HRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ 162 (282)
T ss_dssp HHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc
Confidence 34444456677889999999999999988779999999986432111 23567899999999999
Q ss_pred CCCcceEEEEEEeCCeeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCc
Q 002255 647 HRHLVGLLGYCLDGNERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSN 726 (947)
Q Consensus 647 h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~N 726 (947)
| +++.+++.. +..++||||+++|+|.+ +.. .....++.|++.||+|||+ .+|+||||||+|
T Consensus 163 --~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~-----------~~~~~i~~qi~~~l~~lH~---~giiHrDlkp~N 223 (282)
T 1zar_A 163 --G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV-----------ENPDEVLDMILEEVAKFYH---RGIVHGDLSQYN 223 (282)
T ss_dssp --T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC-----------SCHHHHHHHHHHHHHHHHH---TTEECSCCSTTS
T ss_pred --C-CCcCeEEec-cceEEEEEecCCCcHHH-cch-----------hhHHHHHHHHHHHHHHHHH---CCCEeCCCCHHH
Confidence 4 666665543 55699999999999988 421 1234699999999999997 899999999999
Q ss_pred EEEcCCCcEEEeecCcceecCCCCCcceeecccccccccCccccc
Q 002255 727 ILLGDDMRAKVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAV 771 (947)
Q Consensus 727 ill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 771 (947)
||++ ++.+||+|||+++.. ..|+|||++.
T Consensus 224 ILl~-~~~vkl~DFG~a~~~---------------~~~~a~e~l~ 252 (282)
T 1zar_A 224 VLVS-EEGIWIIDFPQSVEV---------------GEEGWREILE 252 (282)
T ss_dssp EEEE-TTEEEECCCTTCEET---------------TSTTHHHHHH
T ss_pred EEEE-CCcEEEEECCCCeEC---------------CCCCHHHHHH
Confidence 9999 999999999998643 3468888774
No 339
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.86 E-value=1.1e-20 Score=199.30 Aligned_cols=160 Identities=21% Similarity=0.274 Sum_probs=111.1
Q ss_pred CcEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEE
Q 002255 114 LQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLH 193 (947)
Q Consensus 114 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~ 193 (947)
.++++++++.++.+|.... ++|++|+|++|++.+ ..+..+.++++|++|+|++|.+++..|..+. .+++|++|+
T Consensus 16 ~~~l~~~~~~l~~~p~~~~---~~l~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~--~l~~L~~L~ 89 (251)
T 3m19_A 16 KKEVDCQGKSLDSVPSGIP---ADTEKLDLQSTGLAT-LSDATFRGLTKLTWLNLDYNQLQTLSAGVFD--DLTELGTLG 89 (251)
T ss_dssp GTEEECTTCCCSSCCSCCC---TTCCEEECTTSCCCC-CCTTTTTTCTTCCEEECTTSCCCCCCTTTTT--TCTTCCEEE
T ss_pred CeEEecCCCCccccCCCCC---CCCCEEEccCCCcCc-cCHhHhcCcccCCEEECCCCcCCccCHhHhc--cCCcCCEEE
Confidence 3344444444444443321 344555555555543 3334455555555555555555555555565 577888888
Q ss_pred ccCCcccCcCCccccCCCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccCCcCcCCCCC-CCCCCCCCEEEccCCcc
Q 002255 194 LAFNFLQGPIPLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPLPD-LSGLSSLQDFSVRDNQL 272 (947)
Q Consensus 194 Ls~N~l~~~~p~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~l~~N~l 272 (947)
|++|++++..+..|. ++++|+.|+|++|+|++.++. +..+++|++|+|++|+|
T Consensus 90 L~~n~l~~~~~~~~~--------------------------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 143 (251)
T 3m19_A 90 LANNQLASLPLGVFD--------------------------HLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQL 143 (251)
T ss_dssp CTTSCCCCCCTTTTT--------------------------TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CCCCcccccChhHhc--------------------------ccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcC
Confidence 888888855554443 478999999999999987776 68899999999999999
Q ss_pred ccCCCccccCCCCCCeEeccCCcccccCCCCCC
Q 002255 273 TGIVPSSLVNLHSLAVVNLTNNLFQGQTPKFNS 305 (947)
Q Consensus 273 ~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~ 305 (947)
++..+..|..+++|++|+|++|++++..+..+.
T Consensus 144 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 176 (251)
T 3m19_A 144 QSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFD 176 (251)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTT
T ss_pred CccCHHHcCcCcCCCEEECCCCcCCccCHHHHh
Confidence 987777899999999999999999988776543
No 340
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.86 E-value=1.3e-21 Score=228.26 Aligned_cols=197 Identities=24% Similarity=0.358 Sum_probs=163.3
Q ss_pred CCCCC-----CCcee-EeCCCCcEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCCCCCCCCCCcEEecCCCc
Q 002255 50 DPDPC-----KWKHI-QCSPSNRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNN 123 (947)
Q Consensus 50 ~~d~C-----~w~gv-~C~~~~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~n~ 123 (947)
+.++| .|.|+ .|.. ++++.|+|++|++++ +|..+. ++|++|+|++|+|+ .+| ..+++|++|+|++|+
T Consensus 39 ~~~~~~~~~~~~~~l~~C~~-~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip--~~l~~L~~L~Ls~N~ 111 (571)
T 3cvr_A 39 QALPGENRNEAVSLLKECLI-NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP--ELPASLEYLDACDNR 111 (571)
T ss_dssp TCCTTCCHHHHHHHHHHHHH-TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC--CCCTTCCEEECCSSC
T ss_pred cCCccccccchhhhcccccc-CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc--cccCCCCEEEccCCC
Confidence 45678 79999 7863 589999999999996 888774 89999999999999 455 568999999999999
Q ss_pred CCCCCcccccCCCCCcEEeccCCCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCcccCcC
Q 002255 124 FTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPI 203 (947)
Q Consensus 124 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~ 203 (947)
|++++. +.. +|++|+|++|+|++ +|. .+++|++|+|++|.|++ +|. .+++|++|+|++|+|++ +
T Consensus 112 l~~ip~--l~~--~L~~L~Ls~N~l~~--lp~---~l~~L~~L~Ls~N~l~~-lp~-----~l~~L~~L~Ls~N~L~~-l 175 (571)
T 3cvr_A 112 LSTLPE--LPA--SLKHLDVDNNQLTM--LPE---LPALLEYINADNNQLTM-LPE-----LPTSLEVLSVRNNQLTF-L 175 (571)
T ss_dssp CSCCCC--CCT--TCCEEECCSSCCSC--CCC---CCTTCCEEECCSSCCSC-CCC-----CCTTCCEEECCSSCCSC-C
T ss_pred CCCcch--hhc--CCCEEECCCCcCCC--CCC---cCccccEEeCCCCccCc-CCC-----cCCCcCEEECCCCCCCC-c
Confidence 999776 554 99999999999976 666 68999999999999986 665 26789999999999986 6
Q ss_pred CccccCCCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccCCcCcCCCCCCCCCCCC-------CEEEccCCccccCC
Q 002255 204 PLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPLPDLSGLSSL-------QDFSVRDNQLTGIV 276 (947)
Q Consensus 204 p~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L-------~~L~l~~N~l~g~~ 276 (947)
|. +. ++|+.|+|++|+|+..++ +.. +| +.|+|++|+|+ .+
T Consensus 176 p~-l~----------------------------~~L~~L~Ls~N~L~~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~l 222 (571)
T 3cvr_A 176 PE-LP----------------------------ESLEALDVSTNLLESLPA-VPV--RNHHSEETEIFFRCRENRIT-HI 222 (571)
T ss_dssp CC-CC----------------------------TTCCEEECCSSCCSSCCC-CC----------CCEEEECCSSCCC-CC
T ss_pred ch-hh----------------------------CCCCEEECcCCCCCchhh-HHH--hhhcccccceEEecCCCcce-ec
Confidence 64 42 678888888888885444 544 66 99999999999 68
Q ss_pred CccccCCCCCCeEeccCCcccccCCC
Q 002255 277 PSSLVNLHSLAVVNLTNNLFQGQTPK 302 (947)
Q Consensus 277 p~~l~~l~~L~~L~Ls~N~l~g~~p~ 302 (947)
|..+.++++|+.|+|++|+|++.+|.
T Consensus 223 p~~l~~l~~L~~L~L~~N~l~~~~p~ 248 (571)
T 3cvr_A 223 PENILSLDPTCTIILEDNPLSSRIRE 248 (571)
T ss_dssp CGGGGGSCTTEEEECCSSSCCHHHHH
T ss_pred CHHHhcCCCCCEEEeeCCcCCCcCHH
Confidence 99999999999999999999988775
No 341
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.86 E-value=1.7e-23 Score=233.52 Aligned_cols=263 Identities=16% Similarity=0.212 Sum_probs=198.6
Q ss_pred EEEcccCcccCcCCCCCCC-CCCcEEecCCCcCCCCCc----ccccCCC-CCcEEeccCCCCCCCCCcccccCC-----C
Q 002255 93 VLEVMKNKLTGQIPSLSGL-SSLQEVLFDDNNFTSVPS----DFFKGLT-SLQTISLDYNSFDSWVIPESLKDA-----T 161 (947)
Q Consensus 93 ~L~L~~N~l~~~~p~~~~l-~~L~~L~L~~n~l~~~~~----~~~~~l~-~L~~L~Ls~N~l~~~~~p~~~~~l-----~ 161 (947)
.++|+.|.++|.+|.+... ++|++|+|++|.++...+ ..|..++ +|++|+|++|++.. ..+..+..+ +
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~-~~~~~l~~~l~~~~~ 80 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGF-KNSDELVQILAAIPA 80 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGG-SCHHHHHHHHHTSCT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCH-HHHHHHHHHHhccCC
Confidence 4688999999999965554 449999999999999988 7788898 89999999999976 456666664 9
Q ss_pred CCCeEeccCceeeeccCcccCCC--CC-CCccEEEccCCcccCcCCccccC------CCCceeeeccCCCCCCCCCc-hh
Q 002255 162 GLQRFSANGANITGTIPDFLGGD--TI-PGLMHLHLAFNFLQGPIPLSFGK------SSIQTLWLNGQKGDSKLNGS-VA 231 (947)
Q Consensus 162 ~L~~L~l~~n~l~~~~p~~~~~~--~l-~~L~~L~Ls~N~l~~~~p~~~~~------~~L~~L~l~~n~~~~~~~~~-~~ 231 (947)
+|++|+|++|.+++..+..++.. .+ ++|++|+|++|++++..+..+.. .+|++|+|++|.+....... ..
T Consensus 81 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 160 (362)
T 3goz_A 81 NVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQ 160 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHH
T ss_pred CccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHH
Confidence 99999999999998777654410 23 79999999999998776655432 48999999999887544322 24
Q ss_pred hhcCCC-CCcEEEccCCcCcCCCCC-----CCCC-CCCCEEEccCCccccC----CCccccCC-CCCCeEeccCCccccc
Q 002255 232 VIQNMT-SLTQLWLHGNSFTGPLPD-----LSGL-SSLQDFSVRDNQLTGI----VPSSLVNL-HSLAVVNLTNNLFQGQ 299 (947)
Q Consensus 232 ~~~~l~-~L~~L~L~~N~l~~~~~~-----~~~l-~~L~~L~l~~N~l~g~----~p~~l~~l-~~L~~L~Ls~N~l~g~ 299 (947)
.+..++ +|++|+|++|++++..+. +..+ ++|++|+|++|+|++. ++..+..+ ++|++|+|++|++++.
T Consensus 161 ~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~ 240 (362)
T 3goz_A 161 ILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGP 240 (362)
T ss_dssp HHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCC
T ss_pred HHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcH
Confidence 455565 999999999999987662 4445 5999999999999863 56666664 5999999999999854
Q ss_pred CCCCCCCcccccccCCCCcccCcCCCcCCCccceeeecccccCChhhhhccCCCCCCCCCCCCCcccCCCCceeEEEecC
Q 002255 300 TPKFNSPVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKN 379 (947)
Q Consensus 300 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~ 379 (947)
.+..+ . ..+....+|+.|+|++
T Consensus 241 ~~~~l-------------------------------------------~---------------~~~~~l~~L~~L~L~~ 262 (362)
T 3goz_A 241 SLENL-------------------------------------------K---------------LLKDSLKHLQTVYLDY 262 (362)
T ss_dssp CHHHH-------------------------------------------H---------------HTTTTTTTCSEEEEEH
T ss_pred HHHHH-------------------------------------------H---------------HHHhcCCCccEEEecc
Confidence 33100 0 0112334688999999
Q ss_pred CCcee-------eccccccCCccCCeEeccCCcccccCCCcC
Q 002255 380 LGLSG-------TISSNFSRLTSLRQLMLSGNELTGTIPKEL 414 (947)
Q Consensus 380 n~l~g-------~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l 414 (947)
|.+.+ .++..+.++++|+.|||++|++.+..|..+
T Consensus 263 n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~~~~ 304 (362)
T 3goz_A 263 DIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSIPI 304 (362)
T ss_dssp HHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGCHHH
T ss_pred CCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcchHHH
Confidence 98443 345577888889999999999887655443
No 342
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.86 E-value=4.2e-21 Score=208.78 Aligned_cols=194 Identities=22% Similarity=0.328 Sum_probs=160.7
Q ss_pred CcEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCCCCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEecc
Q 002255 65 NRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLD 144 (947)
Q Consensus 65 ~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 144 (947)
.+++.|+++++++.. ++ .+..+++|++|+|++|.+++..+ +.++++|++|+|++|++++++ .+..+++|++|+|+
T Consensus 41 ~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~-~~~l~~L~~L~L~~n~l~~~~--~~~~l~~L~~L~l~ 115 (308)
T 1h6u_A 41 DGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP-LKNLTKITELELSGNPLKNVS--AIAGLQSIKTLDLT 115 (308)
T ss_dssp HTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG-GTTCCSCCEEECCSCCCSCCG--GGTTCTTCCEEECT
T ss_pred CCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh-HccCCCCCEEEccCCcCCCch--hhcCCCCCCEEECC
Confidence 478899999998884 55 68889999999999999988766 889999999999999999874 48889999999999
Q ss_pred CCCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCcccCcCCccccC-CCCceeeeccCCCC
Q 002255 145 YNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGK-SSIQTLWLNGQKGD 223 (947)
Q Consensus 145 ~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~l~~n~~~ 223 (947)
+|++.. ++. +..+++|++|++++|.+++..+ +. .+++|++|+|++|++++..+ +.. .+|+.|++++|.+.
T Consensus 116 ~n~l~~--~~~-l~~l~~L~~L~l~~n~l~~~~~--l~--~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~ 186 (308)
T 1h6u_A 116 STQITD--VTP-LAGLSNLQVLYLDLNQITNISP--LA--GLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKIS 186 (308)
T ss_dssp TSCCCC--CGG-GTTCTTCCEEECCSSCCCCCGG--GG--GCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred CCCCCC--chh-hcCCCCCCEEECCCCccCcCcc--cc--CCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccC
Confidence 999975 443 8899999999999999986554 55 68899999999999986444 433 78999999999887
Q ss_pred CCCCCchhhhcCCCCCcEEEccCCcCcCCCCCCCCCCCCCEEEccCCccccCCCcc
Q 002255 224 SKLNGSVAVIQNMTSLTQLWLHGNSFTGPLPDLSGLSSLQDFSVRDNQLTGIVPSS 279 (947)
Q Consensus 224 ~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~g~~p~~ 279 (947)
.... +..+++|+.|+|++|++++..+ +..+++|+.|+|++|++++ .|..
T Consensus 187 ~~~~-----l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~l~~N~i~~-~~~~ 235 (308)
T 1h6u_A 187 DISP-----LASLPNLIEVHLKNNQISDVSP-LANTSNLFIVTLTNQTITN-QPVF 235 (308)
T ss_dssp CCGG-----GGGCTTCCEEECTTSCCCBCGG-GTTCTTCCEEEEEEEEEEC-CCEE
T ss_pred cChh-----hcCCCCCCEEEccCCccCcccc-ccCCCCCCEEEccCCeeec-CCee
Confidence 6532 6778999999999999987764 8889999999999999984 4433
No 343
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.85 E-value=4.4e-21 Score=196.12 Aligned_cols=183 Identities=23% Similarity=0.357 Sum_probs=140.2
Q ss_pred CCCceeEeCCCCcEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCcCCCCCcccc
Q 002255 54 CKWKHIQCSPSNRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNFTSVPSDFF 132 (947)
Q Consensus 54 C~w~gv~C~~~~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~l~~~~~~~~ 132 (947)
|.|.+|.|+.. +++ .+|..+ .++|++|+|++|++++.++ .|.++++|++|+|++|+++++++..|
T Consensus 7 C~~~~v~c~~~-----------~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 72 (208)
T 2o6s_A 7 CSGTTVECYSQ-----------GRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVF 72 (208)
T ss_dssp EETTEEECCSS-----------CCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTT
T ss_pred ECCCEEEecCC-----------Ccc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhc
Confidence 68999999643 333 455444 3689999999999998777 57899999999999999999999889
Q ss_pred cCCCCCcEEeccCCCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCcccCcCCccccCCCC
Q 002255 133 KGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSI 212 (947)
Q Consensus 133 ~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L 212 (947)
..+++|++|+|++|++.. ..+..+.++++|++|++++|++++..+..+. .+++|++|+|++|++++..+..+.
T Consensus 73 ~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~l~~N~l~~~~~~~~~---- 145 (208)
T 2o6s_A 73 NKLTSLTYLNLSTNQLQS-LPNGVFDKLTQLKELALNTNQLQSLPDGVFD--KLTQLKDLRLYQNQLKSVPDGVFD---- 145 (208)
T ss_dssp TTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCCCCCTTTTT--TCTTCCEEECCSSCCSCCCTTTTT----
T ss_pred CCCCCcCEEECCCCcCCc-cCHhHhcCccCCCEEEcCCCcCcccCHhHhc--cCCcCCEEECCCCccceeCHHHhc----
Confidence 999999999999999975 4445578888888888888888866666565 577888888888888754443332
Q ss_pred ceeeeccCCCCCCCCCchhhhcCCCCCcEEEccCCcCcCCCCCCCCCCCCCEEEccCCccccCCCccccCCCC
Q 002255 213 QTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPLPDLSGLSSLQDFSVRDNQLTGIVPSSLVNLHS 285 (947)
Q Consensus 213 ~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~ 285 (947)
++++|+.|+|++|.+.+. +++|++|+++.|+++|.+|..++.++.
T Consensus 146 ----------------------~l~~L~~L~l~~N~~~~~------~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 146 ----------------------RLTSLQYIWLHDNPWDCT------CPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp ----------------------TCTTCCEEECCSCCBCCC------TTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred ----------------------cCCCccEEEecCCCeecC------CCCHHHHHHHHHhCCceeeccCccccC
Confidence 467778888888866643 346777777777787777777776654
No 344
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.85 E-value=7.5e-21 Score=211.02 Aligned_cols=197 Identities=16% Similarity=0.189 Sum_probs=147.2
Q ss_pred EEecCCcccccCcccccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCcCCC-CCcccccCCCCCcE-EeccCC
Q 002255 70 IQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNFTS-VPSDFFKGLTSLQT-ISLDYN 146 (947)
Q Consensus 70 l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~-L~Ls~N 146 (947)
++.++++++ .+|..+. ++|++|+|++|+|+..++ .|.++++|++|+|++|++.+ +++.+|.++++|++ +.++.|
T Consensus 14 v~C~~~~Lt-~iP~~l~--~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N 90 (350)
T 4ay9_X 14 FLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKAN 90 (350)
T ss_dssp EEEESTTCC-SCCTTCC--TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEET
T ss_pred EEecCCCCC-ccCcCcC--CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCC
Confidence 445566777 7787663 689999999999997776 68999999999999999855 66778899988775 666778
Q ss_pred CCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccC-CcccCcCCccccCCCCceeeeccCCCCCC
Q 002255 147 SFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAF-NFLQGPIPLSFGKSSIQTLWLNGQKGDSK 225 (947)
Q Consensus 147 ~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~~~L~~L~l~~n~~~~~ 225 (947)
++.. ..|..|..+++|++|++++|.+++..+..+. ...++..|++.+ |++....+..|..
T Consensus 91 ~l~~-l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~--~~~~l~~l~l~~~~~i~~l~~~~f~~---------------- 151 (350)
T 4ay9_X 91 NLLY-INPEAFQNLPNLQYLLISNTGIKHLPDVHKI--HSLQKVLLDIQDNINIHTIERNSFVG---------------- 151 (350)
T ss_dssp TCCE-ECTTSBCCCTTCCEEEEEEECCSSCCCCTTC--CBSSCEEEEEESCTTCCEECTTSSTT----------------
T ss_pred cccc-cCchhhhhccccccccccccccccCCchhhc--ccchhhhhhhccccccccccccchhh----------------
Confidence 8876 5577888899999999999988866555554 456777888865 4555333333321
Q ss_pred CCCchhhhcCCCCCcEEEccCCcCcCCCCCCCCCCCCCEEEccC-CccccCCC-ccccCCCCCCeEeccCCcccc
Q 002255 226 LNGSVAVIQNMTSLTQLWLHGNSFTGPLPDLSGLSSLQDFSVRD-NQLTGIVP-SSLVNLHSLAVVNLTNNLFQG 298 (947)
Q Consensus 226 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~-N~l~g~~p-~~l~~l~~L~~L~Ls~N~l~g 298 (947)
....++.|+|++|+|+...+......+|+.|++++ |.++ .+| ..|..+++|+.|+|++|+|+.
T Consensus 152 ---------~~~~l~~L~L~~N~i~~i~~~~f~~~~L~~l~l~~~n~l~-~i~~~~f~~l~~L~~LdLs~N~l~~ 216 (350)
T 4ay9_X 152 ---------LSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNNLE-ELPNDVFHGASGPVILDISRTRIHS 216 (350)
T ss_dssp ---------SBSSCEEEECCSSCCCEECTTSSTTEEEEEEECTTCTTCC-CCCTTTTTTEECCSEEECTTSCCCC
T ss_pred ---------cchhhhhhccccccccCCChhhccccchhHHhhccCCccc-CCCHHHhccCcccchhhcCCCCcCc
Confidence 12457888888888887777666677888888875 5555 555 467888888888888888874
No 345
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.84 E-value=1.4e-20 Score=219.46 Aligned_cols=134 Identities=27% Similarity=0.410 Sum_probs=83.6
Q ss_pred CCcEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEE
Q 002255 113 SLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHL 192 (947)
Q Consensus 113 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L 192 (947)
+|+.|+|++|+|+++|+.. +++|++|+|++|+|.. +| ..+++|++|+|++|+|++ +|. +. . +|++|
T Consensus 60 ~L~~L~Ls~n~L~~lp~~l---~~~L~~L~Ls~N~l~~--ip---~~l~~L~~L~Ls~N~l~~-ip~-l~--~--~L~~L 125 (571)
T 3cvr_A 60 QFSELQLNRLNLSSLPDNL---PPQITVLEITQNALIS--LP---ELPASLEYLDACDNRLST-LPE-LP--A--SLKHL 125 (571)
T ss_dssp TCSEEECCSSCCSCCCSCC---CTTCSEEECCSSCCSC--CC---CCCTTCCEEECCSSCCSC-CCC-CC--T--TCCEE
T ss_pred CccEEEeCCCCCCccCHhH---cCCCCEEECcCCCCcc--cc---cccCCCCEEEccCCCCCC-cch-hh--c--CCCEE
Confidence 5555555555555544432 2456666666666642 44 334556666666666655 555 43 1 67777
Q ss_pred EccCCcccCcCCccccCCCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccCCcCcCCCCCCCCCCCCCEEEccCCcc
Q 002255 193 HLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPLPDLSGLSSLQDFSVRDNQL 272 (947)
Q Consensus 193 ~Ls~N~l~~~~p~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l 272 (947)
+|++|+|++ +|. .+++|+.|+|++|+|++. |. .+++|++|+|++|+|
T Consensus 126 ~Ls~N~l~~-lp~-----------------------------~l~~L~~L~Ls~N~l~~l-p~--~l~~L~~L~Ls~N~L 172 (571)
T 3cvr_A 126 DVDNNQLTM-LPE-----------------------------LPALLEYINADNNQLTML-PE--LPTSLEVLSVRNNQL 172 (571)
T ss_dssp ECCSSCCSC-CCC-----------------------------CCTTCCEEECCSSCCSCC-CC--CCTTCCEEECCSSCC
T ss_pred ECCCCcCCC-CCC-----------------------------cCccccEEeCCCCccCcC-CC--cCCCcCEEECCCCCC
Confidence 777777765 443 156677777777777763 33 467777888888887
Q ss_pred ccCCCccccCCCCCCeEeccCCccc
Q 002255 273 TGIVPSSLVNLHSLAVVNLTNNLFQ 297 (947)
Q Consensus 273 ~g~~p~~l~~l~~L~~L~Ls~N~l~ 297 (947)
++ +|. |. ++|+.|+|++|+|+
T Consensus 173 ~~-lp~-l~--~~L~~L~Ls~N~L~ 193 (571)
T 3cvr_A 173 TF-LPE-LP--ESLEALDVSTNLLE 193 (571)
T ss_dssp SC-CCC-CC--TTCCEEECCSSCCS
T ss_pred CC-cch-hh--CCCCEEECcCCCCC
Confidence 75 666 55 77888888888777
No 346
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.82 E-value=4.2e-22 Score=224.58 Aligned_cols=206 Identities=20% Similarity=0.278 Sum_probs=160.8
Q ss_pred CcEEEEEecCCcccccCc----ccccCCCCCCEEEcccC---cccCcCC-C-------CCCCCCCcEEecCCCcCCC---
Q 002255 65 NRVTRIQIGGQNIEGTLP----KELNSLSSLTVLEVMKN---KLTGQIP-S-------LSGLSSLQEVLFDDNNFTS--- 126 (947)
Q Consensus 65 ~~v~~l~L~~~~l~g~~p----~~l~~l~~L~~L~L~~N---~l~~~~p-~-------~~~l~~L~~L~L~~n~l~~--- 126 (947)
.+++.|+|++|++.+..+ ..|..+++|++|+|++| ++++.+| . +..+++|++|+|++|+++.
T Consensus 32 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~ 111 (386)
T 2ca6_A 32 DSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQ 111 (386)
T ss_dssp SCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTH
T ss_pred CCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHH
Confidence 469999999999987644 45779999999999995 5556665 3 3789999999999999998
Q ss_pred -CCcccccCCCCCcEEeccCCCCCCC---CCcccccCC---------CCCCeEeccCceee-eccC---cccCCCCCCCc
Q 002255 127 -VPSDFFKGLTSLQTISLDYNSFDSW---VIPESLKDA---------TGLQRFSANGANIT-GTIP---DFLGGDTIPGL 189 (947)
Q Consensus 127 -~~~~~~~~l~~L~~L~Ls~N~l~~~---~~p~~~~~l---------~~L~~L~l~~n~l~-~~~p---~~~~~~~l~~L 189 (947)
..+..+..+++|++|+|++|.+... .++..+..+ ++|++|+|++|+++ +.+| ..+. .+++|
T Consensus 112 ~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~--~~~~L 189 (386)
T 2ca6_A 112 EPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQ--SHRLL 189 (386)
T ss_dssp HHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHH--HCTTC
T ss_pred HHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHH--hCCCc
Confidence 4566788999999999999998531 123344444 89999999999998 4455 3454 57899
Q ss_pred cEEEccCCcccC-----cCCccccCCCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccCCcCc----CCCC-CCCCC
Q 002255 190 MHLHLAFNFLQG-----PIPLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFT----GPLP-DLSGL 259 (947)
Q Consensus 190 ~~L~Ls~N~l~~-----~~p~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~----~~~~-~~~~l 259 (947)
++|+|++|+++. .+|. .+.++++|+.|+|++|.++ +.+| .+..+
T Consensus 190 ~~L~L~~n~l~~~g~~~l~~~--------------------------~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~ 243 (386)
T 2ca6_A 190 HTVKMVQNGIRPEGIEHLLLE--------------------------GLAYCQELKVLDLQDNTFTHLGSSALAIALKSW 243 (386)
T ss_dssp CEEECCSSCCCHHHHHHHHHT--------------------------TGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGC
T ss_pred CEEECcCCCCCHhHHHHHHHH--------------------------HhhcCCCccEEECcCCCCCcHHHHHHHHHHccC
Confidence 999999999872 1221 2446899999999999996 4444 47789
Q ss_pred CCCCEEEccCCccccC----CCccccC--CCCCCeEeccCCcccc
Q 002255 260 SSLQDFSVRDNQLTGI----VPSSLVN--LHSLAVVNLTNNLFQG 298 (947)
Q Consensus 260 ~~L~~L~l~~N~l~g~----~p~~l~~--l~~L~~L~Ls~N~l~g 298 (947)
++|++|+|++|+|++. +|..+.. +++|+.|+|++|.+++
T Consensus 244 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~ 288 (386)
T 2ca6_A 244 PNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIEL 288 (386)
T ss_dssp TTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBH
T ss_pred CCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCH
Confidence 9999999999999876 5666633 7778888877777763
No 347
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.82 E-value=6.3e-20 Score=187.48 Aligned_cols=151 Identities=25% Similarity=0.305 Sum_probs=76.0
Q ss_pred CEEEcccCcccCcCCCCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCCcccccCCCCCCeEeccCc
Q 002255 92 TVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGA 171 (947)
Q Consensus 92 ~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n 171 (947)
+.++++++.++..+..+ .++|++|+|++|+++++++..|..+++|++|+|++|++..
T Consensus 10 ~~v~c~~~~l~~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~--------------------- 66 (208)
T 2o6s_A 10 TTVECYSQGRTSVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQS--------------------- 66 (208)
T ss_dssp TEEECCSSCCSSCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCC---------------------
T ss_pred CEEEecCCCccCCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCc---------------------
Confidence 34555555555443332 2355666666666665555555555555555555555543
Q ss_pred eeeeccCcccCCCCCCCccEEEccCCcccCcCCccccCCCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccCCcCcC
Q 002255 172 NITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTG 251 (947)
Q Consensus 172 ~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~ 251 (947)
..+..+. .+++|++|+|++|++++..+..+ .++++|+.|+|++|++++
T Consensus 67 ----~~~~~~~--~l~~L~~L~Ls~n~l~~~~~~~~--------------------------~~l~~L~~L~L~~N~l~~ 114 (208)
T 2o6s_A 67 ----LPNGVFN--KLTSLTYLNLSTNQLQSLPNGVF--------------------------DKLTQLKELALNTNQLQS 114 (208)
T ss_dssp ----CCTTTTT--TCTTCCEEECCSSCCCCCCTTTT--------------------------TTCTTCCEEECCSSCCCC
T ss_pred ----cChhhcC--CCCCcCEEECCCCcCCccCHhHh--------------------------cCccCCCEEEcCCCcCcc
Confidence 2222222 34445555555555543222222 124555555555555554
Q ss_pred CCCC-CCCCCCCCEEEccCCccccCCCccccCCCCCCeEeccCCccc
Q 002255 252 PLPD-LSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQ 297 (947)
Q Consensus 252 ~~~~-~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~ 297 (947)
.++. +..+++|++|+|++|++++..+..+..+++|+.|+|++|.+.
T Consensus 115 ~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 161 (208)
T 2o6s_A 115 LPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWD 161 (208)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC
T ss_pred cCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCee
Confidence 4443 445555555555555555444444555555555555555544
No 348
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.82 E-value=4.3e-20 Score=204.91 Aligned_cols=251 Identities=15% Similarity=0.136 Sum_probs=182.4
Q ss_pred CEEEcccCcccCcCCCCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCCcccccCCCCCCe-EeccC
Q 002255 92 TVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQR-FSANG 170 (947)
Q Consensus 92 ~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~-L~l~~ 170 (947)
++++.++|+|+..+..+ .++|++|+|++|+|+.+++.+|.++++|++|+|++|++.+...+..|.++++|.+ +.+..
T Consensus 12 ~~v~C~~~~Lt~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~ 89 (350)
T 4ay9_X 12 RVFLCQESKVTEIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89 (350)
T ss_dssp TEEEEESTTCCSCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEE
T ss_pred CEEEecCCCCCccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccC
Confidence 57889999999655455 3689999999999999999999999999999999999866333457888988776 56667
Q ss_pred ceeeeccCcccCCCCCCCccEEEccCCcccCcCCccccCCCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccC-CcC
Q 002255 171 ANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHG-NSF 249 (947)
Q Consensus 171 n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~-N~l 249 (947)
|+++...|..|. .+++|++|++++|++++..+..+. ....+..|++.+ |++
T Consensus 90 N~l~~l~~~~f~--~l~~L~~L~l~~n~l~~~~~~~~~--------------------------~~~~l~~l~l~~~~~i 141 (350)
T 4ay9_X 90 NNLLYINPEAFQ--NLPNLQYLLISNTGIKHLPDVHKI--------------------------HSLQKVLLDIQDNINI 141 (350)
T ss_dssp TTCCEECTTSBC--CCTTCCEEEEEEECCSSCCCCTTC--------------------------CBSSCEEEEEESCTTC
T ss_pred CcccccCchhhh--hccccccccccccccccCCchhhc--------------------------ccchhhhhhhcccccc
Confidence 899988888887 689999999999999865544332 245677788765 566
Q ss_pred cCCCC-CCCCC-CCCCEEEccCCccccCCCccccCCCCCCeEeccCCcccccCCCCCCCcccccccCCCCcccCcCCCcC
Q 002255 250 TGPLP-DLSGL-SSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQTPKFNSPVRFDMAKGSNSFCLDDAGVAC 327 (947)
Q Consensus 250 ~~~~~-~~~~l-~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (947)
+...+ .+..+ ..++.|+|++|+|+ .+|.......+|+.|++++|+.-+.+|..
T Consensus 142 ~~l~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~~i~~~------------------------ 196 (350)
T 4ay9_X 142 HTIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELPND------------------------ 196 (350)
T ss_dssp CEECTTSSTTSBSSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTCTTCCCCCTT------------------------
T ss_pred ccccccchhhcchhhhhhcccccccc-CCChhhccccchhHHhhccCCcccCCCHH------------------------
Confidence 65554 35555 46889999999998 56666667788999999864433344431
Q ss_pred CCccceeeecccccCChhhhhccCCCCCCCCCCCCCcccCCCCceeEEEecCCCceeeccccccCCccCCeEeccCCccc
Q 002255 328 DGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLSGTISSNFSRLTSLRQLMLSGNELT 407 (947)
Q Consensus 328 ~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~ 407 (947)
.+....+|+.|+|++|+|+..-+..+. +|+.|.+.++.--
T Consensus 197 -------------------------------------~f~~l~~L~~LdLs~N~l~~lp~~~~~---~L~~L~~l~~~~l 236 (350)
T 4ay9_X 197 -------------------------------------VFHGASGPVILDISRTRIHSLPSYGLE---NLKKLRARSTYNL 236 (350)
T ss_dssp -------------------------------------TTTTEECCSEEECTTSCCCCCCSSSCT---TCCEEECTTCTTC
T ss_pred -------------------------------------HhccCcccchhhcCCCCcCccChhhhc---cchHhhhccCCCc
Confidence 011234688999999999843333444 4555554444333
Q ss_pred ccCCCcCCCCCCCCccccccccccccCCCCc
Q 002255 408 GTIPKELTTLPSLEMLDVSNNHLFGKVPNFR 438 (947)
Q Consensus 408 g~iP~~l~~l~~L~~L~ls~N~l~g~iP~~~ 438 (947)
..+| .+..+++|+.++++++.-+.....|.
T Consensus 237 ~~lP-~l~~l~~L~~l~l~~~~~c~~~~~~~ 266 (350)
T 4ay9_X 237 KKLP-TLEKLVALMEASLTYPSHCCAFANWR 266 (350)
T ss_dssp CCCC-CTTTCCSCCEEECSCHHHHHHHHHSC
T ss_pred CcCC-CchhCcChhhCcCCCCccccchhhhh
Confidence 4788 58889999999998877665544443
No 349
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.82 E-value=2.5e-21 Score=213.89 Aligned_cols=201 Identities=13% Similarity=0.164 Sum_probs=165.2
Q ss_pred CcEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCc-CC-CCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEe
Q 002255 65 NRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQ-IP-SLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTIS 142 (947)
Q Consensus 65 ~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~-~p-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 142 (947)
.+++.++++++.+.+..+. +..+++|++|+|++|.+++. ++ .+.++++|++|+|++|.+++..+..+..+++|++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 5799999999999977665 67899999999999999875 56 688999999999999999987788899999999999
Q ss_pred ccCC-CCCCCCCcccccCCCCCCeEeccCc-eeeec-cCcccCCCCCC-CccEEEccCCc--cc-CcCCccccCCCCcee
Q 002255 143 LDYN-SFDSWVIPESLKDATGLQRFSANGA-NITGT-IPDFLGGDTIP-GLMHLHLAFNF--LQ-GPIPLSFGKSSIQTL 215 (947)
Q Consensus 143 Ls~N-~l~~~~~p~~~~~l~~L~~L~l~~n-~l~~~-~p~~~~~~~l~-~L~~L~Ls~N~--l~-~~~p~~~~~~~L~~L 215 (947)
|++| .+....++..+.++++|++|++++| .+++. ++..+. .++ +|++|+|++|. ++ +.+|.
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~--~l~~~L~~L~l~~~~~~~~~~~l~~---------- 216 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVA--HVSETITQLNLSGYRKNLQKSDLST---------- 216 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHH--HSCTTCCEEECCSCGGGSCHHHHHH----------
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHH--hcccCCCEEEeCCCcccCCHHHHHH----------
Confidence 9999 6764336777899999999999999 99865 566666 688 99999999994 44 23332
Q ss_pred eeccCCCCCCCCCchhhhcCCCCCcEEEccCCc-CcCC-CCCCCCCCCCCEEEccCCc-cccCCCccccCCCCCCeEecc
Q 002255 216 WLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNS-FTGP-LPDLSGLSSLQDFSVRDNQ-LTGIVPSSLVNLHSLAVVNLT 292 (947)
Q Consensus 216 ~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~-l~~~-~~~~~~l~~L~~L~l~~N~-l~g~~p~~l~~l~~L~~L~Ls 292 (947)
.+.++++|+.|+|++|. +++. ++.+..+++|++|++++|. +.......+.++++|+.|+|+
T Consensus 217 ----------------~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~ 280 (336)
T 2ast_B 217 ----------------LVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVF 280 (336)
T ss_dssp ----------------HHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECT
T ss_pred ----------------HHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEecc
Confidence 24458999999999999 6654 4468889999999999995 332222367888999999998
Q ss_pred CC
Q 002255 293 NN 294 (947)
Q Consensus 293 ~N 294 (947)
+|
T Consensus 281 ~~ 282 (336)
T 2ast_B 281 GI 282 (336)
T ss_dssp TS
T ss_pred Cc
Confidence 87
No 350
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.80 E-value=7.7e-21 Score=230.21 Aligned_cols=223 Identities=17% Similarity=0.147 Sum_probs=107.7
Q ss_pred hHHHHHHHHHHHHcCCC---CCCCCCC--CCCCCCceeEeCCCCcEEEEEecCCcccccCcccccCCCCCCEEEcccCcc
Q 002255 27 SSDAAAMQALKTSLGNP---ASLGWTD--PDPCKWKHIQCSPSNRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKL 101 (947)
Q Consensus 27 ~~~~~~l~~~k~~~~~~---~~~~w~~--~d~C~w~gv~C~~~~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l 101 (947)
..++++|.++..+.... ....|.. ...+.|.++.++. .+++.|+|.++++.. ++. ..|+.++|+.|.|
T Consensus 131 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~~l~L~~n~~~~-~~~-----~~l~~l~Ls~~~i 203 (727)
T 4b8c_D 131 DCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVST-PLTPKIELFANGKDE-ANQ-----ALLQHKKLSQYSI 203 (727)
T ss_dssp -CCCHHHHHHHHHHHHHHTTC-----------------------------------------------------------
T ss_pred ccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecC-CccceEEeeCCCCCc-chh-----hHhhcCccCcccc
Confidence 45778888887665321 2225643 3457899998875 689999999998885 333 3456666777665
Q ss_pred cCcCCCCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCCcccccCCCCCCeEeccCceeeeccCccc
Q 002255 102 TGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFL 181 (947)
Q Consensus 102 ~~~~p~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~ 181 (947)
.+ ++++.|.+. +++..|..+++|++|+|++|.+. .+|..+.++++|++|+|++|.|+ .+|..|
T Consensus 204 ~~-------------~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~--~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~ 266 (727)
T 4b8c_D 204 DE-------------DDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF--NISANIFKYDFLTRLYLNGNSLT-ELPAEI 266 (727)
T ss_dssp --------------------------------CCCCCCEEECTTSCCS--CCCGGGGGCCSCSCCBCTTSCCS-CCCGGG
T ss_pred cC-------------cccccccee-cChhhhccCCCCcEEECCCCCCC--CCChhhcCCCCCCEEEeeCCcCc-ccChhh
Confidence 53 244455555 55666777778888888888775 36666667777777777777777 677777
Q ss_pred CCCCCCCccEEEccCCcccCcCCccccCCCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccCCcCcCCCCCCCCCCC
Q 002255 182 GGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPLPDLSGLSS 261 (947)
Q Consensus 182 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~ 261 (947)
+ .+++|++|+|++|+|+ .+|..|+ ++++|+.|+|++|.|+..+..|..+++
T Consensus 267 ~--~l~~L~~L~Ls~N~l~-~lp~~~~--------------------------~l~~L~~L~L~~N~l~~lp~~~~~l~~ 317 (727)
T 4b8c_D 267 K--NLSNLRVLDLSHNRLT-SLPAELG--------------------------SCFQLKYFYFFDNMVTTLPWEFGNLCN 317 (727)
T ss_dssp G--GGTTCCEEECTTSCCS-SCCSSGG--------------------------GGTTCSEEECCSSCCCCCCSSTTSCTT
T ss_pred h--CCCCCCEEeCcCCcCC-ccChhhc--------------------------CCCCCCEEECCCCCCCccChhhhcCCC
Confidence 6 5777888888888877 6666553 367777777777777755445777777
Q ss_pred CCEEEccCCccccCCCccccCCCC-CCeEeccCCcccccCCC
Q 002255 262 LQDFSVRDNQLTGIVPSSLVNLHS-LAVVNLTNNLFQGQTPK 302 (947)
Q Consensus 262 L~~L~l~~N~l~g~~p~~l~~l~~-L~~L~Ls~N~l~g~~p~ 302 (947)
|++|+|++|.|++.+|..+..+.. +..|+|++|.++|.+|.
T Consensus 318 L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~ 359 (727)
T 4b8c_D 318 LQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH 359 (727)
T ss_dssp CCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_pred ccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc
Confidence 777777777777777777655422 22356777777766664
No 351
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.80 E-value=5.4e-19 Score=183.21 Aligned_cols=163 Identities=21% Similarity=0.359 Sum_probs=134.0
Q ss_pred CCCCCCCCCCceeEeCCCCcEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCcCC
Q 002255 47 GWTDPDPCKWKHIQCSPSNRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNFT 125 (947)
Q Consensus 47 ~w~~~d~C~w~gv~C~~~~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~l~ 125 (947)
.|.+.+.|.|++|.|+.. ++. .+|..+. ++|++|+|++|++++.+| .|.++++|++|+|++|+|+
T Consensus 12 ~~~~~~~Cs~~~v~c~~~-----------~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~ 77 (229)
T 3e6j_A 12 ACPSQCSCSGTTVDCRSK-----------RHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLG 77 (229)
T ss_dssp CCCTTCEEETTEEECTTS-----------CCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred cCCCCCEEeCCEeEccCC-----------CcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCC
Confidence 455678899999999642 333 6666554 899999999999999877 6899999999999999999
Q ss_pred CCCcccccCCCCCcEEeccCCCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCcccCcCCc
Q 002255 126 SVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPL 205 (947)
Q Consensus 126 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 205 (947)
.+++..|..+++|++|+|++|+|.. ..+..+..+++|++|+|++|+|+ .+|..+. .+++|++|+|++|+|++..+.
T Consensus 78 ~i~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~--~l~~L~~L~L~~N~l~~~~~~ 153 (229)
T 3e6j_A 78 ALPVGVFDSLTQLTVLDLGTNQLTV-LPSAVFDRLVHLKELFMCCNKLT-ELPRGIE--RLTHLTHLALDQNQLKSIPHG 153 (229)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCC-SCCTTGG--GCTTCSEEECCSSCCCCCCTT
T ss_pred CcChhhcccCCCcCEEECCCCcCCc-cChhHhCcchhhCeEeccCCccc-ccCcccc--cCCCCCEEECCCCcCCccCHH
Confidence 9999999999999999999999975 45566789999999999999998 7788776 689999999999999865554
Q ss_pred cccCCCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccCCcCcCCC
Q 002255 206 SFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPL 253 (947)
Q Consensus 206 ~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 253 (947)
.+. .+++|+.|+|++|.+....
T Consensus 154 ~~~--------------------------~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 154 AFD--------------------------RLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp TTT--------------------------TCTTCCEEECTTSCBCTTB
T ss_pred HHh--------------------------CCCCCCEEEeeCCCccCCc
Confidence 443 4777888888888777543
No 352
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.79 E-value=3.9e-19 Score=209.84 Aligned_cols=176 Identities=24% Similarity=0.360 Sum_probs=143.8
Q ss_pred ccCCCCCCEEEcccCcccCcCCCCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCCcccccCCCCCC
Q 002255 85 LNSLSSLTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQ 164 (947)
Q Consensus 85 l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~ 164 (947)
+..|++|+.|+|++|.+... +.+..|++|+.|+|++|+|+++++ +..+++|++|+|++|.|.. + ..+..+++|+
T Consensus 39 ~~~L~~L~~L~l~~n~i~~l-~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~--l-~~l~~l~~L~ 112 (605)
T 1m9s_A 39 QNELNSIDQIIANNSDIKSV-QGIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD--L-SSLKDLKKLK 112 (605)
T ss_dssp HHHHTTCCCCBCTTCCCCCC-TTGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC--C-TTSTTCTTCC
T ss_pred hhcCCCCCEEECcCCCCCCC-hHHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC--C-hhhccCCCCC
Confidence 45678888888888888754 568888888888888888888876 7888888888888888865 3 3688888888
Q ss_pred eEeccCceeeeccCcccCCCCCCCccEEEccCCcccCcCCccccCCCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEc
Q 002255 165 RFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWL 244 (947)
Q Consensus 165 ~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L 244 (947)
.|+|++|.+++ ++ .+. .+++|+.|+|++|++++. .. +..+++|+.|+|
T Consensus 113 ~L~Ls~N~l~~-l~-~l~--~l~~L~~L~Ls~N~l~~l--~~--------------------------l~~l~~L~~L~L 160 (605)
T 1m9s_A 113 SLSLEHNGISD-IN-GLV--HLPQLESLYLGNNKITDI--TV--------------------------LSRLTKLDTLSL 160 (605)
T ss_dssp EEECTTSCCCC-CG-GGG--GCTTCSEEECCSSCCCCC--GG--------------------------GGSCTTCSEEEC
T ss_pred EEEecCCCCCC-Cc-ccc--CCCccCEEECCCCccCCc--hh--------------------------hcccCCCCEEEC
Confidence 88888888875 33 344 578888888888888753 22 446899999999
Q ss_pred cCCcCcCCCCCCCCCCCCCEEEccCCccccCCCccccCCCCCCeEeccCCcccccCC
Q 002255 245 HGNSFTGPLPDLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQTP 301 (947)
Q Consensus 245 ~~N~l~~~~~~~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p 301 (947)
++|.|++.+| +..+++|+.|+|++|+|++. ..+..+++|+.|+|++|++++...
T Consensus 161 s~N~l~~~~~-l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p~ 214 (605)
T 1m9s_A 161 EDNQISDIVP-LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKPI 214 (605)
T ss_dssp CSSCCCCCGG-GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCCC
T ss_pred cCCcCCCchh-hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCcc
Confidence 9999998877 88999999999999999964 469999999999999999987543
No 353
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.78 E-value=7.2e-19 Score=189.38 Aligned_cols=174 Identities=24% Similarity=0.351 Sum_probs=134.3
Q ss_pred ccCCCCCCEEEcccCcccCcCCCCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCCcccccCCCCCC
Q 002255 85 LNSLSSLTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQ 164 (947)
Q Consensus 85 l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~ 164 (947)
+..+++|+.|++++|.++.. +.+..+++|++|+|++|+++++++ +..+++|++|+|++|++.. +..+..+++|+
T Consensus 42 ~~~l~~L~~L~l~~~~i~~~-~~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~---~~~l~~l~~L~ 115 (291)
T 1h6t_A 42 QNELNSIDQIIANNSDIKSV-QGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD---LSSLKDLKKLK 115 (291)
T ss_dssp HHHHHTCCEEECTTSCCCCC-TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC---GGGGTTCTTCC
T ss_pred hhhcCcccEEEccCCCcccC-hhHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC---ChhhccCCCCC
Confidence 34567788888888877654 567778888888888888887766 7778888888888888754 33477788888
Q ss_pred eEeccCceeeeccCcccCCCCCCCccEEEccCCcccCcCCccccCCCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEc
Q 002255 165 RFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWL 244 (947)
Q Consensus 165 ~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L 244 (947)
+|++++|++++. ..+. .+++|++|+|++|++++. .. +..+++|+.|+|
T Consensus 116 ~L~L~~n~i~~~--~~l~--~l~~L~~L~l~~n~l~~~--~~--------------------------l~~l~~L~~L~L 163 (291)
T 1h6t_A 116 SLSLEHNGISDI--NGLV--HLPQLESLYLGNNKITDI--TV--------------------------LSRLTKLDTLSL 163 (291)
T ss_dssp EEECTTSCCCCC--GGGG--GCTTCCEEECCSSCCCCC--GG--------------------------GGGCTTCSEEEC
T ss_pred EEECCCCcCCCC--hhhc--CCCCCCEEEccCCcCCcc--hh--------------------------hccCCCCCEEEc
Confidence 888888887753 3344 578888888888888743 12 345888999999
Q ss_pred cCCcCcCCCCCCCCCCCCCEEEccCCccccCCCccccCCCCCCeEeccCCccccc
Q 002255 245 HGNSFTGPLPDLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQ 299 (947)
Q Consensus 245 ~~N~l~~~~~~~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ 299 (947)
++|++++..+ +..+++|+.|+|++|+|++ +| .+..+++|+.|+|++|+++..
T Consensus 164 ~~N~l~~~~~-l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 164 EDNQISDIVP-LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp CSSCCCCCGG-GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEECC
T ss_pred cCCccccchh-hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccCC
Confidence 9999988766 8889999999999999985 45 488999999999999998864
No 354
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.78 E-value=2.4e-19 Score=211.58 Aligned_cols=169 Identities=23% Similarity=0.332 Sum_probs=128.9
Q ss_pred CCCCEEEcccCcccCcCCCCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCCcccccCCCCCCeEec
Q 002255 89 SSLTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSA 168 (947)
Q Consensus 89 ~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l 168 (947)
..+..+.|..+.+...+ .+..|++|+.|+|++|.+..++ .+..+++|++|+|++|+|.+ ++. +..+++|+.|+|
T Consensus 21 ~~l~~l~l~~~~i~~~~-~~~~L~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~Ls~N~l~~--~~~-l~~l~~L~~L~L 94 (605)
T 1m9s_A 21 AETIKDNLKKKSVTDAV-TQNELNSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTD--IKP-LTNLKNLGWLFL 94 (605)
T ss_dssp HHHHHHHTTCSCTTSEE-CHHHHTTCCCCBCTTCCCCCCT--TGGGCTTCCEEECTTSCCCC--CGG-GGGCTTCCEEEC
T ss_pred HHHHHHhccCCCccccc-chhcCCCCCEEECcCCCCCCCh--HHccCCCCCEEEeeCCCCCC--Chh-hccCCCCCEEEC
Confidence 34555667777766544 3567788888888888888875 37788888888888888865 343 788888888888
Q ss_pred cCceeeeccCcccCCCCCCCccEEEccCCcccCcCCccccCCCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccCCc
Q 002255 169 NGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNS 248 (947)
Q Consensus 169 ~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~ 248 (947)
++|.+++ +| .+. .+++|++|+|++|++++. + . +.++++|+.|+|++|.
T Consensus 95 s~N~l~~-l~-~l~--~l~~L~~L~Ls~N~l~~l-~-~--------------------------l~~l~~L~~L~Ls~N~ 142 (605)
T 1m9s_A 95 DENKIKD-LS-SLK--DLKKLKSLSLEHNGISDI-N-G--------------------------LVHLPQLESLYLGNNK 142 (605)
T ss_dssp CSSCCCC-CT-TST--TCTTCCEEECTTSCCCCC-G-G--------------------------GGGCTTCSEEECCSSC
T ss_pred cCCCCCC-Ch-hhc--cCCCCCEEEecCCCCCCC-c-c--------------------------ccCCCccCEEECCCCc
Confidence 8888875 33 454 578888888888887742 2 1 3457888888888888
Q ss_pred CcCCCCCCCCCCCCCEEEccCCccccCCCccccCCCCCCeEeccCCcccc
Q 002255 249 FTGPLPDLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQG 298 (947)
Q Consensus 249 l~~~~~~~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g 298 (947)
|++. +.+..+++|+.|+|++|+|++..| +..+++|+.|+|++|+|++
T Consensus 143 l~~l-~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~ 189 (605)
T 1m9s_A 143 ITDI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD 189 (605)
T ss_dssp CCCC-GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB
T ss_pred cCCc-hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCC
Confidence 8876 668888888888888888887655 8888888888888888875
No 355
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.77 E-value=5.5e-21 Score=228.55 Aligned_cols=332 Identities=16% Similarity=0.106 Sum_probs=225.9
Q ss_pred CcEEEEEecCCccccc----CcccccCCCCCCEEEcccCcccCc----CC-CCCCCCCCcEEecCCCcCCCCCcccccCC
Q 002255 65 NRVTRIQIGGQNIEGT----LPKELNSLSSLTVLEVMKNKLTGQ----IP-SLSGLSSLQEVLFDDNNFTSVPSDFFKGL 135 (947)
Q Consensus 65 ~~v~~l~L~~~~l~g~----~p~~l~~l~~L~~L~L~~N~l~~~----~p-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 135 (947)
.+++.|+|++|.+++. ++..+..+++|+.|+|++|.+++. ++ .+.++++|++|+|++|.+.+++ ..+..+
T Consensus 164 ~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~l~-~~~~~~ 242 (592)
T 3ogk_B 164 RKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELV-GFFKAA 242 (592)
T ss_dssp TTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGGGH-HHHHHC
T ss_pred CCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHHHH-HHHhhh
Confidence 4789999999998766 555667889999999999999743 23 3567999999999999999865 668899
Q ss_pred CCCcEEeccCCCCC--CCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCcccCcCCcc-cc-CCC
Q 002255 136 TSLQTISLDYNSFD--SWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLS-FG-KSS 211 (947)
Q Consensus 136 ~~L~~L~Ls~N~l~--~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~-~~~ 211 (947)
++|++|+++.+... ....+..+..+++|+.|++.++. .+.+|..+. .+++|++|+|++|.+++..... +. ..+
T Consensus 243 ~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~-~~~l~~~~~--~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~ 319 (592)
T 3ogk_B 243 ANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMG-PNEMPILFP--FAAQIRKLDLLYALLETEDHCTLIQKCPN 319 (592)
T ss_dssp TTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCC-TTTGGGGGG--GGGGCCEEEETTCCCCHHHHHHHHTTCTT
T ss_pred hHHHhhcccccccccchHHHHHHhhccccccccCccccc-hhHHHHHHh--hcCCCcEEecCCCcCCHHHHHHHHHhCcC
Confidence 99999999854322 12345678888999999998853 346677665 6889999999999987544422 22 268
Q ss_pred CceeeeccCCCCCCCCCchhhhcCCCCCcEEEcc-----------CCcCcCC-CCC-CCCCCCCCEEEccCCccccCCCc
Q 002255 212 IQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLH-----------GNSFTGP-LPD-LSGLSSLQDFSVRDNQLTGIVPS 278 (947)
Q Consensus 212 L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~-----------~N~l~~~-~~~-~~~l~~L~~L~l~~N~l~g~~p~ 278 (947)
|+.|+++++ +.. .+......++++|++|+|+ .|.+++. ++. ..++++|++|+++.|++++..+.
T Consensus 320 L~~L~L~~~-~~~--~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~ 396 (592)
T 3ogk_B 320 LEVLETRNV-IGD--RGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLE 396 (592)
T ss_dssp CCEEEEEGG-GHH--HHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHH
T ss_pred CCEEeccCc-cCH--HHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHH
Confidence 999999833 211 1122334568889999999 3566543 122 34578999999999999888777
Q ss_pred cccC-CCCCCeEecc----CCcccccCCCCCCCcccccccCCCCcccCcCCCcCCCccceeeecccccCChhhhhccCCC
Q 002255 279 SLVN-LHSLAVVNLT----NNLFQGQTPKFNSPVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVLAESWKG 353 (947)
Q Consensus 279 ~l~~-l~~L~~L~Ls----~N~l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~ 353 (947)
.+.. +++|+.|+|+ .|.+++.+.+. .....+....++..++... +.+ .+... .+.
T Consensus 397 ~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~--~~~~~~~~~~~L~~L~L~~--~~~----------~l~~~-~~~----- 456 (592)
T 3ogk_B 397 SIGTYLKNLCDFRLVLLDREERITDLPLDN--GVRSLLIGCKKLRRFAFYL--RQG----------GLTDL-GLS----- 456 (592)
T ss_dssp HHHHHCCSCCEEEEEECSCCSCCSSCCCHH--HHHHHHHHCTTCCEEEEEC--CGG----------GCCHH-HHH-----
T ss_pred HHHhhCCCCcEEEEeecCCCccccCchHHH--HHHHHHHhCCCCCEEEEec--CCC----------CccHH-HHH-----
Confidence 7776 8999999996 67777532110 0000000011111111100 000 00000 000
Q ss_pred CCCCCCCCCCcccCCCCceeEEEecCCCcee-eccccccCCccCCeEeccCCccccc-CCCcCCCCCCCCcccccccccc
Q 002255 354 NNPCNSDWKGVSCDAGGNITVVNLKNLGLSG-TISSNFSRLTSLRQLMLSGNELTGT-IPKELTTLPSLEMLDVSNNHLF 431 (947)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g-~ip~~~~~l~~L~~L~Ls~N~l~g~-iP~~l~~l~~L~~L~ls~N~l~ 431 (947)
......++|+.|+|++|++++ .++..+..+++|+.|+|++|.+++. ++..+..+++|++|+|++|+++
T Consensus 457 ----------~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it 526 (592)
T 3ogk_B 457 ----------YIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRAS 526 (592)
T ss_dssp ----------HHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCC
T ss_pred ----------HHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCC
Confidence 001124579999999999987 4566678899999999999998865 4444567899999999999987
Q ss_pred cc
Q 002255 432 GK 433 (947)
Q Consensus 432 g~ 433 (947)
+.
T Consensus 527 ~~ 528 (592)
T 3ogk_B 527 MT 528 (592)
T ss_dssp TT
T ss_pred HH
Confidence 65
No 356
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.77 E-value=1.6e-18 Score=178.35 Aligned_cols=155 Identities=21% Similarity=0.256 Sum_probs=130.3
Q ss_pred cEEEccCCcccCcCCccccCCCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccCCcCcCCCCC--CCCCCCCCEEEc
Q 002255 190 MHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPLPD--LSGLSSLQDFSV 267 (947)
Q Consensus 190 ~~L~Ls~N~l~~~~p~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~--~~~l~~L~~L~l 267 (947)
+.+++++|.++ .+|..+ ...++.|+|++|+|++.++. +..+++|++|+|
T Consensus 14 ~~l~~s~n~l~-~iP~~~----------------------------~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L 64 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHI----------------------------PQYTAELRLNNNEFTVLEATGIFKKLPQLRKINF 64 (220)
T ss_dssp TEEECCSSCCS-SCCSCC----------------------------CTTCSEEECCSSCCCEECCCCCGGGCTTCCEEEC
T ss_pred CEeEeCCCCcc-cCccCC----------------------------CCCCCEEEcCCCcCCccCchhhhccCCCCCEEEC
Confidence 57888888887 466544 24567899999999887653 778899999999
Q ss_pred cCCccccCCCccccCCCCCCeEeccCCcccccCCCCCCCcccccccCCCCcccCcCCCcCCCccceeeecccccCChhhh
Q 002255 268 RDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQTPKFNSPVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVL 347 (947)
Q Consensus 268 ~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l 347 (947)
++|+|++..+..|.++++|++|+|++|++++..|..
T Consensus 65 ~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~-------------------------------------------- 100 (220)
T 2v70_A 65 SNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKM-------------------------------------------- 100 (220)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGG--------------------------------------------
T ss_pred CCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhH--------------------------------------------
Confidence 999999877778999999999999999988665532
Q ss_pred hccCCCCCCCCCCCCCcccCCCCceeEEEecCCCceeeccccccCCccCCeEeccCCcccccCCCcCCCCCCCCcccccc
Q 002255 348 AESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLSGTISSNFSRLTSLRQLMLSGNELTGTIPKELTTLPSLEMLDVSN 427 (947)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ls~ 427 (947)
+..+.+|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++
T Consensus 101 ------------------~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 162 (220)
T 2v70_A 101 ------------------FKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLA 162 (220)
T ss_dssp ------------------GTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred ------------------hcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecC
Confidence 12234788999999999988899999999999999999999988899999999999999999
Q ss_pred ccccccCC
Q 002255 428 NHLFGKVP 435 (947)
Q Consensus 428 N~l~g~iP 435 (947)
|+|++..+
T Consensus 163 N~l~c~c~ 170 (220)
T 2v70_A 163 NPFNCNCY 170 (220)
T ss_dssp CCEECSGG
T ss_pred cCCcCCCc
Confidence 99998877
No 357
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.75 E-value=1.9e-18 Score=182.46 Aligned_cols=138 Identities=22% Similarity=0.224 Sum_probs=106.3
Q ss_pred CCcCceecccCceEEEEEEE-cCCcE--EEEEEecccccCh----------------------HHHHHHHHHHHHHHcCC
Q 002255 592 FSEENVLGRGGFGTVYKGEL-HDGTK--IAVKRMESAVVSE----------------------KGFAEFKSEIAVLTKVR 646 (947)
Q Consensus 592 ~~~~~~lg~G~~g~Vy~~~~-~~g~~--vavK~~~~~~~~~----------------------~~~~~~~~E~~~l~~l~ 646 (947)
|.+.+.||+|+||.||+|.. .+|+. ||||+++...... .....+.+|+.++.+++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 56789999999999999987 67999 9999875432110 11246889999999998
Q ss_pred CCCc--ceEEEEEEeCCeeEEEEEecCC-C----chhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHh-hccCCCee
Q 002255 647 HRHL--VGLLGYCLDGNERLLVYEYMPQ-G----TLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLH-GLAHQSFI 718 (947)
Q Consensus 647 h~ni--v~l~~~~~~~~~~~lV~e~~~~-g----sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH-~~~~~~iv 718 (947)
|+++ ..++++ +..++||||+.+ | +|.+.... .++..+..++.|++.||+||| + .+||
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~--------~~~~~~~~i~~qi~~~l~~lH~~---~giv 193 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE--------LKELDVEGIFNDVVENVKRLYQE---AELV 193 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG--------GGGSCHHHHHHHHHHHHHHHHHT---SCEE
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc--------cChHHHHHHHHHHHHHHHHHHHH---CCEE
Confidence 8764 344432 356899999942 4 56554422 223456789999999999999 6 8999
Q ss_pred ecCCCCCcEEEcCCCcEEEeecCcceec
Q 002255 719 HRDLKPSNILLGDDMRAKVADFGLVRLA 746 (947)
Q Consensus 719 HrDlkp~Nill~~~~~~kl~DfGla~~~ 746 (947)
||||||+|||++. .++|+|||+|...
T Consensus 194 HrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 194 HADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred eCCCCHHHEEEcC--cEEEEECcccccC
Confidence 9999999999998 9999999999765
No 358
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.75 E-value=7.9e-18 Score=173.16 Aligned_cols=150 Identities=21% Similarity=0.300 Sum_probs=127.0
Q ss_pred EEecCCcccccCcccccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEeccCCCC
Q 002255 70 IQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSF 148 (947)
Q Consensus 70 l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 148 (947)
+++++++++ .+|..+. ++|+.|+|++|+|++..+ .|.++++|++|+|++|+++++.+..|..+++|++|+|++|+|
T Consensus 16 v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l 92 (220)
T 2v9t_B 16 VDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKI 92 (220)
T ss_dssp EECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCC
T ss_pred EEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcC
Confidence 455566666 6777665 689999999999998887 799999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCcccCcCCccccCCCCceeeeccCCCCCCCCC
Q 002255 149 DSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDSKLNG 228 (947)
Q Consensus 149 ~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~l~~n~~~~~~~~ 228 (947)
.. ..+..|..+++|++|+|++|.|++..|..|. .+++|++|+|++|++++..+..|.
T Consensus 93 ~~-l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~-------------------- 149 (220)
T 2v9t_B 93 TE-LPKSLFEGLFSLQLLLLNANKINCLRVDAFQ--DLHNLNLLSLYDNKLQTIAKGTFS-------------------- 149 (220)
T ss_dssp CC-CCTTTTTTCTTCCEEECCSSCCCCCCTTTTT--TCTTCCEEECCSSCCSCCCTTTTT--------------------
T ss_pred Cc-cCHhHccCCCCCCEEECCCCCCCEeCHHHcC--CCCCCCEEECCCCcCCEECHHHHh--------------------
Confidence 75 4445578899999999999999988888887 689999999999999976665543
Q ss_pred chhhhcCCCCCcEEEccCCcCcC
Q 002255 229 SVAVIQNMTSLTQLWLHGNSFTG 251 (947)
Q Consensus 229 ~~~~~~~l~~L~~L~L~~N~l~~ 251 (947)
.+++|+.|+|++|.+..
T Consensus 150 ------~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 150 ------PLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp ------TCTTCCEEECCSSCEEC
T ss_pred ------CCCCCCEEEeCCCCcCC
Confidence 47788888888887763
No 359
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.75 E-value=3.4e-18 Score=190.34 Aligned_cols=174 Identities=18% Similarity=0.232 Sum_probs=119.9
Q ss_pred EEEecCCcccccCcccccCCCCCCEEEcccCcccCcCC-CCC-CCCCCcEEecCCCcCCCCCcccccCCCCCcEEeccCC
Q 002255 69 RIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLS-GLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYN 146 (947)
Q Consensus 69 ~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N 146 (947)
.+++++++|+ .+|..+. +.|+.|+|++|+|++..+ .|. ++++|++|+|++|+|+++++..|..+++|++|+|++|
T Consensus 22 ~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 22 ILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp EEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 5677788887 5777664 458889999999988777 466 8888888888888888888888888888888888888
Q ss_pred CCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCcccCcCCccccCCCCceeeeccCCCCCCC
Q 002255 147 SFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDSKL 226 (947)
Q Consensus 147 ~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~l~~n~~~~~~ 226 (947)
+|.. ..+..|.++++|++|+|++|+|++..|..|. .+++|++|+|++|+|+
T Consensus 99 ~l~~-~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~--~l~~L~~L~L~~N~l~-------------------------- 149 (361)
T 2xot_A 99 HLHT-LDEFLFSDLQALEVLLLYNNHIVVVDRNAFE--DMAQLQKLYLSQNQIS-------------------------- 149 (361)
T ss_dssp CCCE-ECTTTTTTCTTCCEEECCSSCCCEECTTTTT--TCTTCCEEECCSSCCC--------------------------
T ss_pred cCCc-CCHHHhCCCcCCCEEECCCCcccEECHHHhC--CcccCCEEECCCCcCC--------------------------
Confidence 8864 3344555566666666665555555455444 3445555555555544
Q ss_pred CCchhhhcCCCCCcEEEccCCcCcCCCCC-C---CCCCCCCEEEccCCccccCCCccccCCCC--CCeEeccCCcccc
Q 002255 227 NGSVAVIQNMTSLTQLWLHGNSFTGPLPD-L---SGLSSLQDFSVRDNQLTGIVPSSLVNLHS--LAVVNLTNNLFQG 298 (947)
Q Consensus 227 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~---~~l~~L~~L~l~~N~l~g~~p~~l~~l~~--L~~L~Ls~N~l~g 298 (947)
+.++. + ..+++|+.|+|++|+|++..+..+..++. |+.|+|++|++..
T Consensus 150 ------------------------~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 150 ------------------------RFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp ------------------------SCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred ------------------------eeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccC
Confidence 43332 1 45677777777777777555566777776 4788999998873
No 360
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.75 E-value=1e-17 Score=172.24 Aligned_cols=135 Identities=27% Similarity=0.332 Sum_probs=87.1
Q ss_pred cEEeccCCCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCcccCcCCccccCCCCceeeec
Q 002255 139 QTISLDYNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLN 218 (947)
Q Consensus 139 ~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~l~ 218 (947)
++|+|++|+|.....+..|..+++|++|+|++|.|++..+..|. .+++|++|+|++|++++..+..|.
T Consensus 35 ~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~---------- 102 (220)
T 2v70_A 35 AELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFE--GASGVNEILLTSNRLENVQHKMFK---------- 102 (220)
T ss_dssp SEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTT--TCTTCCEEECCSSCCCCCCGGGGT----------
T ss_pred CEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhC--CCCCCCEEECCCCccCccCHhHhc----------
Confidence 44444444443311122344455555555555555555555555 466777777777777655444332
Q ss_pred cCCCCCCCCCchhhhcCCCCCcEEEccCCcCcCCCCC-CCCCCCCCEEEccCCccccCCCccccCCCCCCeEeccCCccc
Q 002255 219 GQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPLPD-LSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQ 297 (947)
Q Consensus 219 ~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~ 297 (947)
++++|++|+|++|+|++..|. +.++++|++|+|++|+|++..|..|..+++|+.|+|++|+++
T Consensus 103 ----------------~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 103 ----------------GLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFN 166 (220)
T ss_dssp ----------------TCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEE
T ss_pred ----------------CCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCc
Confidence 467777777777777777653 777888888888888888777888888888888888888887
Q ss_pred ccCC
Q 002255 298 GQTP 301 (947)
Q Consensus 298 g~~p 301 (947)
+..+
T Consensus 167 c~c~ 170 (220)
T 2v70_A 167 CNCY 170 (220)
T ss_dssp CSGG
T ss_pred CCCc
Confidence 6543
No 361
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.75 E-value=3.2e-20 Score=221.88 Aligned_cols=332 Identities=12% Similarity=0.065 Sum_probs=226.9
Q ss_pred cEEEEEecCCc-ccc-cCcccccCCCCCCEEEcccCcccCc----CC-CCCCCCCCcEEecCCCcCCCCCc----ccccC
Q 002255 66 RVTRIQIGGQN-IEG-TLPKELNSLSSLTVLEVMKNKLTGQ----IP-SLSGLSSLQEVLFDDNNFTSVPS----DFFKG 134 (947)
Q Consensus 66 ~v~~l~L~~~~-l~g-~~p~~l~~l~~L~~L~L~~N~l~~~----~p-~~~~l~~L~~L~L~~n~l~~~~~----~~~~~ 134 (947)
+++.|+|+++. ++. .++..+..+++|++|+|++|.+++. ++ .+.++++|++|+|++|.++++.. ..+.+
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~ 218 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh
Confidence 49999999886 221 2333345889999999999998765 33 34578999999999999985443 44567
Q ss_pred CCCCcEEeccCCCCCCCCCcccccCCCCCCeEeccCceee---eccCcccCCCCCCCccEEEccCCcccCcCCccccC-C
Q 002255 135 LTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGANIT---GTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGK-S 210 (947)
Q Consensus 135 l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~---~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~ 210 (947)
+++|++|+|++|.+.+ +|..+.++++|++|+++.+... +..+..+. .+++|+.|+++++... .+|..+.. .
T Consensus 219 ~~~L~~L~L~~~~~~~--l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~--~~~~L~~L~l~~~~~~-~l~~~~~~~~ 293 (592)
T 3ogk_B 219 CRSLVSVKVGDFEILE--LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLV--FPRKLCRLGLSYMGPN-EMPILFPFAA 293 (592)
T ss_dssp CTTCCEEECSSCBGGG--GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCC--CCTTCCEEEETTCCTT-TGGGGGGGGG
T ss_pred CCCCcEEeccCccHHH--HHHHHhhhhHHHhhcccccccccchHHHHHHhh--ccccccccCccccchh-HHHHHHhhcC
Confidence 8999999999999875 7899999999999999864433 23334454 6789999999986443 56666644 6
Q ss_pred CCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccCCcCcC-CCCC-CCCCCCCCEEEcc-----------CCccccC-C
Q 002255 211 SIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTG-PLPD-LSGLSSLQDFSVR-----------DNQLTGI-V 276 (947)
Q Consensus 211 ~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~-~~~l~~L~~L~l~-----------~N~l~g~-~ 276 (947)
+|++|+|++|.+... .....+.++++|+.|+|+ |.++. .++. ...+++|++|+++ .|.+++. +
T Consensus 294 ~L~~L~Ls~~~l~~~--~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~ 370 (592)
T 3ogk_B 294 QIRKLDLLYALLETE--DHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGL 370 (592)
T ss_dssp GCCEEEETTCCCCHH--HHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHH
T ss_pred CCcEEecCCCcCCHH--HHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHH
Confidence 899999999874322 122346789999999999 44443 3333 3558899999999 4677654 3
Q ss_pred CccccCCCCCCeEeccCCcccccCCCCCCCcccccccCCCCcccCcCCCcCCCccceeeecccccCChhhhhccCCCCCC
Q 002255 277 PSSLVNLHSLAVVNLTNNLFQGQTPKFNSPVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVLAESWKGNNP 356 (947)
Q Consensus 277 p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~ 356 (947)
+.....+++|++|+++.|.+++..+..+.. ...+...+...... .-+.+...+ ....+.
T Consensus 371 ~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~------~~~~L~~L~l~~~~---~~n~l~~~p----~~~~~~-------- 429 (592)
T 3ogk_B 371 IALAQGCQELEYMAVYVSDITNESLESIGT------YLKNLCDFRLVLLD---REERITDLP----LDNGVR-------- 429 (592)
T ss_dssp HHHHHHCTTCSEEEEEESCCCHHHHHHHHH------HCCSCCEEEEEECS---CCSCCSSCC----CHHHHH--------
T ss_pred HHHHhhCccCeEEEeecCCccHHHHHHHHh------hCCCCcEEEEeecC---CCccccCch----HHHHHH--------
Confidence 333556999999999999998754321100 01111111110000 000000000 000000
Q ss_pred CCCCCCCcccCCCCceeEEEecCC--CceeeccccccC-CccCCeEeccCCcccc-cCCCcCCCCCCCCccccccccccc
Q 002255 357 CNSDWKGVSCDAGGNITVVNLKNL--GLSGTISSNFSR-LTSLRQLMLSGNELTG-TIPKELTTLPSLEMLDVSNNHLFG 432 (947)
Q Consensus 357 ~~~~~~~~~~~~~~~L~~L~Ls~n--~l~g~ip~~~~~-l~~L~~L~Ls~N~l~g-~iP~~l~~l~~L~~L~ls~N~l~g 432 (947)
.....+++|+.|+|++| .+++..+..++. +++|+.|+|++|++++ .++..+..+++|+.|+|++|++++
T Consensus 430 -------~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~ 502 (592)
T 3ogk_B 430 -------SLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSE 502 (592)
T ss_dssp -------HHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBH
T ss_pred -------HHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcH
Confidence 00122467999999854 477776666654 8999999999999987 456667889999999999999876
Q ss_pred c
Q 002255 433 K 433 (947)
Q Consensus 433 ~ 433 (947)
.
T Consensus 503 ~ 503 (592)
T 3ogk_B 503 R 503 (592)
T ss_dssp H
T ss_pred H
Confidence 5
No 362
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.74 E-value=7.8e-18 Score=173.19 Aligned_cols=145 Identities=21% Similarity=0.402 Sum_probs=133.9
Q ss_pred CCCceeEeCCC----------CcEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCC
Q 002255 54 CKWKHIQCSPS----------NRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDN 122 (947)
Q Consensus 54 C~w~gv~C~~~----------~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n 122 (947)
|.|..|.|... ..++.|+|++|++++..+..|..+++|++|+|++|++++..| .|.++++|++|+|++|
T Consensus 11 C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 11 CSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp EETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred ECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 78999999642 368999999999998777789999999999999999999877 7999999999999999
Q ss_pred cCCCCCcccccCCCCCcEEeccCCCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCcccC
Q 002255 123 NFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQG 201 (947)
Q Consensus 123 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~ 201 (947)
+|+.+++..|..+++|++|+|++|+|.. ..|..|..+++|++|+|++|+|++..+..+. .+++|++|+|++|.+..
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINC-LRVDAFQDLHNLNLLSLYDNKLQTIAKGTFS--PLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCSCCCTTTTT--TCTTCCEEECCSSCEEC
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCE-eCHHHcCCCCCCCEEECCCCcCCEECHHHHh--CCCCCCEEEeCCCCcCC
Confidence 9999999999999999999999999976 6688999999999999999999988888787 68999999999999974
No 363
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.74 E-value=4.5e-18 Score=183.15 Aligned_cols=169 Identities=25% Similarity=0.385 Sum_probs=147.8
Q ss_pred CcEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCCCCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEecc
Q 002255 65 NRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLD 144 (947)
Q Consensus 65 ~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 144 (947)
.+++.|++++|++.. ++ .+..+++|++|+|++|++++..+ +.++++|++|+|++|++++++. +..+++|++|+|+
T Consensus 46 ~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~ 120 (291)
T 1h6t_A 46 NSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP-LANLKNLGWLFLDENKVKDLSS--LKDLKKLKSLSLE 120 (291)
T ss_dssp HTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCGGG--GTTCTTCCEEECT
T ss_pred CcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc-cccCCCCCEEECCCCcCCCChh--hccCCCCCEEECC
Confidence 478999999999984 44 58999999999999999998776 9999999999999999999654 8999999999999
Q ss_pred CCCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCcccCcCCccccCCCCceeeeccCCCCC
Q 002255 145 YNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDS 224 (947)
Q Consensus 145 ~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~l~~n~~~~ 224 (947)
+|++.. + ..+..+++|++|++++|++++. ..+. .+++|++|+|++|++++..| +
T Consensus 121 ~n~i~~--~-~~l~~l~~L~~L~l~~n~l~~~--~~l~--~l~~L~~L~L~~N~l~~~~~--l----------------- 174 (291)
T 1h6t_A 121 HNGISD--I-NGLVHLPQLESLYLGNNKITDI--TVLS--RLTKLDTLSLEDNQISDIVP--L----------------- 174 (291)
T ss_dssp TSCCCC--C-GGGGGCTTCCEEECCSSCCCCC--GGGG--GCTTCSEEECCSSCCCCCGG--G-----------------
T ss_pred CCcCCC--C-hhhcCCCCCCEEEccCCcCCcc--hhhc--cCCCCCEEEccCCccccchh--h-----------------
Confidence 999976 3 5789999999999999999975 4555 68999999999999986544 3
Q ss_pred CCCCchhhhcCCCCCcEEEccCCcCcCCCCCCCCCCCCCEEEccCCcccc
Q 002255 225 KLNGSVAVIQNMTSLTQLWLHGNSFTGPLPDLSGLSSLQDFSVRDNQLTG 274 (947)
Q Consensus 225 ~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~g 274 (947)
..+++|+.|+|++|.+++. +.+..+++|+.|++++|+++.
T Consensus 175 ---------~~l~~L~~L~L~~N~i~~l-~~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 175 ---------AGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp ---------TTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEEEEEEEEEC
T ss_pred ---------cCCCccCEEECCCCcCCCC-hhhccCCCCCEEECcCCcccC
Confidence 3488999999999999875 568889999999999999985
No 364
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.74 E-value=5.3e-18 Score=188.82 Aligned_cols=147 Identities=19% Similarity=0.271 Sum_probs=125.4
Q ss_pred CCCceeEeCCC----------CcEEEEEecCCcccccCccccc-CCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCC
Q 002255 54 CKWKHIQCSPS----------NRVTRIQIGGQNIEGTLPKELN-SLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDD 121 (947)
Q Consensus 54 C~w~gv~C~~~----------~~v~~l~L~~~~l~g~~p~~l~-~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~ 121 (947)
|.|..|.|... ..++.|+|++|+|++..+..+. ++++|++|+|++|+|++..+ .|.++++|++|+|++
T Consensus 18 C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 18 CASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp EETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 67888999642 3588999999999987777787 99999999999999999887 699999999999999
Q ss_pred CcCCCCCcccccCCCCCcEEeccCCCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCC-CCCCCccEEEccCCccc
Q 002255 122 NNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGG-DTIPGLMHLHLAFNFLQ 200 (947)
Q Consensus 122 n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~-~~l~~L~~L~Ls~N~l~ 200 (947)
|+|+.+++..|..+++|++|+|++|+|.. ..|..|..+++|+.|+|++|+|++..+..+.+ ..+++|++|+|++|+|+
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~-~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVV-VDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCE-ECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccE-ECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 99999999999999999999999999976 56889999999999999999999654444421 14677777777777777
Q ss_pred C
Q 002255 201 G 201 (947)
Q Consensus 201 ~ 201 (947)
+
T Consensus 177 ~ 177 (361)
T 2xot_A 177 K 177 (361)
T ss_dssp C
T ss_pred c
Confidence 3
No 365
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.73 E-value=2.8e-20 Score=218.31 Aligned_cols=189 Identities=17% Similarity=0.139 Sum_probs=117.3
Q ss_pred cCCCCCCEEEcccCcccCcCCCCCCCCCCcEEecCCCc-------------CCCCCcccccCCCCCcEEe-ccCCCCCCC
Q 002255 86 NSLSSLTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNN-------------FTSVPSDFFKGLTSLQTIS-LDYNSFDSW 151 (947)
Q Consensus 86 ~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~n~-------------l~~~~~~~~~~l~~L~~L~-Ls~N~l~~~ 151 (947)
..+++|+.|+|++|+|+..++.+++|++|++|++++|. +.+.+|..++.+++|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~-- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKSTVLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD-- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH--
T ss_pred ccCccceeccCChhhHHhhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc--
Confidence 56788889999999887554478888899999987775 5566677777788888887 6666542
Q ss_pred CCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCcccCcCCccccC-CCCceeeeccCCCCCCCCCch
Q 002255 152 VIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGK-SSIQTLWLNGQKGDSKLNGSV 230 (947)
Q Consensus 152 ~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~l~~n~~~~~~~~~~ 230 (947)
.|..+.+.+|.++...+ ..|+.|+|++|+|++ +|. ++. .+|+.|+|++|.+... +
T Consensus 424 ----------~L~~l~l~~n~i~~l~~--------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~~l----p 479 (567)
T 1dce_A 424 ----------DLRSKFLLENSVLKMEY--------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLRAL----P 479 (567)
T ss_dssp ----------HHHHHHHHHHHHHHHHH--------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCCCC----C
T ss_pred ----------hhhhhhhhcccccccCc--------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccccc----c
Confidence 12333333333332111 134555555555553 333 322 2333333333333211 1
Q ss_pred hhhcCCCCCcEEEccCCcCcCCCCCCCCCCCCCEEEccCCccccCC-CccccCCCCCCeEeccCCcccccCC
Q 002255 231 AVIQNMTSLTQLWLHGNSFTGPLPDLSGLSSLQDFSVRDNQLTGIV-PSSLVNLHSLAVVNLTNNLFQGQTP 301 (947)
Q Consensus 231 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~g~~-p~~l~~l~~L~~L~Ls~N~l~g~~p 301 (947)
..++++++|+.|+|++|+|++ +|.+..+++|+.|+|++|+|++.+ |..++.+++|+.|+|++|+|++.+|
T Consensus 480 ~~~~~l~~L~~L~Ls~N~l~~-lp~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 480 PALAALRCLEVLQASDNALEN-VDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp GGGGGCTTCCEEECCSSCCCC-CGGGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred hhhhcCCCCCEEECCCCCCCC-CcccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 123457777777777777776 346777777777777777777665 7777777777777777777776554
No 366
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.72 E-value=5.3e-17 Score=168.13 Aligned_cols=154 Identities=20% Similarity=0.265 Sum_probs=86.8
Q ss_pred CCEEEcccCcccCcCCCCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCCcccccCCCCCCeEeccC
Q 002255 91 LTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANG 170 (947)
Q Consensus 91 L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~ 170 (947)
.+.++.+++.++..+..+. ++|++|+|++|+++++++..|..+++|++|+|++|+|.. ..+..|..+
T Consensus 21 ~~~v~c~~~~l~~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~-i~~~~~~~l---------- 87 (229)
T 3e6j_A 21 GTTVDCRSKRHASVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGA-LPVGVFDSL---------- 87 (229)
T ss_dssp TTEEECTTSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTC----------
T ss_pred CCEeEccCCCcCccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCC-cChhhcccC----------
Confidence 4556676666665443333 666666666666666666666666666666666666643 222334444
Q ss_pred ceeeeccCcccCCCCCCCccEEEccCCcccCcCCccccCCCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccCCcCc
Q 002255 171 ANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFT 250 (947)
Q Consensus 171 n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~ 250 (947)
++|++|+|++|+|++..+..|. .+++|+.|+|++|+|+
T Consensus 88 ----------------~~L~~L~Ls~N~l~~l~~~~~~--------------------------~l~~L~~L~Ls~N~l~ 125 (229)
T 3e6j_A 88 ----------------TQLTVLDLGTNQLTVLPSAVFD--------------------------RLVHLKELFMCCNKLT 125 (229)
T ss_dssp ----------------TTCCEEECCSSCCCCCCTTTTT--------------------------TCTTCCEEECCSSCCC
T ss_pred ----------------CCcCEEECCCCcCCccChhHhC--------------------------cchhhCeEeccCCccc
Confidence 4555555555555433332221 2455555555555555
Q ss_pred CCCCCCCCCCCCCEEEccCCccccCCCccccCCCCCCeEeccCCccccc
Q 002255 251 GPLPDLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQ 299 (947)
Q Consensus 251 ~~~~~~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ 299 (947)
..+..+..+++|++|+|++|+|++..+..+..+++|+.|+|++|++.+.
T Consensus 126 ~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 126 ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTT
T ss_pred ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCC
Confidence 4433455556666666666666654445566666666666666666544
No 367
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.72 E-value=3.2e-20 Score=217.83 Aligned_cols=203 Identities=17% Similarity=0.159 Sum_probs=137.2
Q ss_pred cCCCCCcEEeccCCCCCCCCCcccccCCCCCCeEeccCce-------------eeeccCcccCCCCCCCccEEE-ccCCc
Q 002255 133 KGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGAN-------------ITGTIPDFLGGDTIPGLMHLH-LAFNF 198 (947)
Q Consensus 133 ~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~-------------l~~~~p~~~~~~~l~~L~~L~-Ls~N~ 198 (947)
..+++|+.|+|++|++. .+|..++++++|+.|++++|. +.+.+|..++ .+++|+.|+ ++.|.
T Consensus 346 ~~~~~L~~L~Ls~n~L~--~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~--~l~~L~~L~~l~~n~ 421 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST--VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQ--YFSTLKAVDPMRAAY 421 (567)
T ss_dssp STTTTSSSCCCCHHHHH--HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHH--HHHHHHHHCGGGHHH
T ss_pred ccCccceeccCChhhHH--hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHH--HHHhcccCcchhhcc
Confidence 56778888888888875 378888888888888876664 4556666665 566777777 56665
Q ss_pred ccCcCCccccCCCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccCCcCcCCCCCCCCCCCCCEEEccCCccccCCCc
Q 002255 199 LQGPIPLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPLPDLSGLSSLQDFSVRDNQLTGIVPS 278 (947)
Q Consensus 199 l~~~~p~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~g~~p~ 278 (947)
+. .|..+++++|.+... . ...|+.|+|++|+|++. |.+..+++|+.|+|++|+|+ .+|.
T Consensus 422 ~~----------~L~~l~l~~n~i~~l--------~-~~~L~~L~Ls~n~l~~l-p~~~~l~~L~~L~Ls~N~l~-~lp~ 480 (567)
T 1dce_A 422 LD----------DLRSKFLLENSVLKM--------E-YADVRVLHLAHKDLTVL-CHLEQLLLVTHLDLSHNRLR-ALPP 480 (567)
T ss_dssp HH----------HHHHHHHHHHHHHHH--------H-HTTCSEEECTTSCCSSC-CCGGGGTTCCEEECCSSCCC-CCCG
T ss_pred cc----------hhhhhhhhccccccc--------C-ccCceEEEecCCCCCCC-cCccccccCcEeecCccccc-ccch
Confidence 43 123333333322211 0 13588888888888874 45888888888888888888 7888
Q ss_pred cccCCCCCCeEeccCCcccccCCCCCCCcccccccCCCCcccCcCCCcCCCccceeeecccccCChhhhhccCCCCCCCC
Q 002255 279 SLVNLHSLAVVNLTNNLFQGQTPKFNSPVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCN 358 (947)
Q Consensus 279 ~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~ 358 (947)
.++++++|+.|+|++|+|++ +|.
T Consensus 481 ~~~~l~~L~~L~Ls~N~l~~-lp~-------------------------------------------------------- 503 (567)
T 1dce_A 481 ALAALRCLEVLQASDNALEN-VDG-------------------------------------------------------- 503 (567)
T ss_dssp GGGGCTTCCEEECCSSCCCC-CGG--------------------------------------------------------
T ss_pred hhhcCCCCCEEECCCCCCCC-Ccc--------------------------------------------------------
Confidence 88888888888888888875 331
Q ss_pred CCCCCcccCCCCceeEEEecCCCceeec-cccccCCccCCeEeccCCcccccCCCcCC----CCCCCCcccc
Q 002255 359 SDWKGVSCDAGGNITVVNLKNLGLSGTI-SSNFSRLTSLRQLMLSGNELTGTIPKELT----TLPSLEMLDV 425 (947)
Q Consensus 359 ~~~~~~~~~~~~~L~~L~Ls~n~l~g~i-p~~~~~l~~L~~L~Ls~N~l~g~iP~~l~----~l~~L~~L~l 425 (947)
+..+++|+.|+|++|+|++.+ |..|+.|++|+.|+|++|+|++..| .+. .+++|+.||+
T Consensus 504 -------l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~-~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 504 -------VANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG-IQERLAEMLPSVSSILT 567 (567)
T ss_dssp -------GTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS-CTTHHHHHCTTCSEEEC
T ss_pred -------cCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc-HHHHHHHHCcccCccCC
Confidence 112335777777777777665 7777777777777777777774433 322 2666766653
No 368
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.72 E-value=5.4e-18 Score=179.52 Aligned_cols=172 Identities=23% Similarity=0.289 Sum_probs=126.1
Q ss_pred CCCCCCEEEcccCcccCcCCCCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCCcccccCCCCCCeE
Q 002255 87 SLSSLTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRF 166 (947)
Q Consensus 87 ~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L 166 (947)
++.++..+++++|.++... .+..+++|++|++++|.++.++ .+..+++|++|+|++|++.+ ++. +..+++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~-~~~~l~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~L~~N~i~~--~~~-l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV-SQKELSGVQNFNGDNSNIQSLA--GMQFFTNLKELHLSHNQISD--LSP-LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE-CHHHHTTCSEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCC--CGG-GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccccc-chhhcCcCcEEECcCCCcccch--HHhhCCCCCEEECCCCccCC--Chh-hccCCCCCEE
Confidence 3556667777777776544 5667777778888877777765 46777788888888887764 444 7777777777
Q ss_pred eccCceeeeccCcccCCCCCCCccEEEccCCcccCcCCccccCCCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccC
Q 002255 167 SANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHG 246 (947)
Q Consensus 167 ~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~ 246 (947)
+|++|++++ +|.. . . ++|++|+|++|++++. + . +.++++|+.|+|++
T Consensus 91 ~L~~N~l~~-l~~~-~--~-~~L~~L~L~~N~l~~~-~-~--------------------------l~~l~~L~~L~Ls~ 137 (263)
T 1xeu_A 91 SVNRNRLKN-LNGI-P--S-ACLSRLFLDNNELRDT-D-S--------------------------LIHLKNLEILSIRN 137 (263)
T ss_dssp ECCSSCCSC-CTTC-C--C-SSCCEEECCSSCCSBS-G-G--------------------------GTTCTTCCEEECTT
T ss_pred ECCCCccCC-cCcc-c--c-CcccEEEccCCccCCC-h-h--------------------------hcCcccccEEECCC
Confidence 777777765 3332 2 2 6777888888877742 2 1 34578888888888
Q ss_pred CcCcCCCCCCCCCCCCCEEEccCCccccCCCccccCCCCCCeEeccCCcccccC
Q 002255 247 NSFTGPLPDLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQT 300 (947)
Q Consensus 247 N~l~~~~~~~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~ 300 (947)
|++++. +.+..+++|++|+|++|++++. ..+..+++|+.|+|++|++++..
T Consensus 138 N~i~~~-~~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~~ 188 (263)
T 1xeu_A 138 NKLKSI-VMLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNEP 188 (263)
T ss_dssp SCCCBC-GGGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECCC
T ss_pred CcCCCC-hHHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCCc
Confidence 888875 4677888899999999998865 67888889999999999988663
No 369
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.71 E-value=1.5e-17 Score=168.03 Aligned_cols=155 Identities=12% Similarity=0.173 Sum_probs=99.3
Q ss_pred CCCCCCcEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCC
Q 002255 109 SGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPG 188 (947)
Q Consensus 109 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~ 188 (947)
..+++|++|++++|.++.++ .+..+++|++|++++|.+. .+..+..+++|++|++++|.+++..|..+. .+++
T Consensus 41 ~~l~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~l~~n~~~---~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~--~l~~ 113 (197)
T 4ezg_A 41 AQMNSLTYITLANINVTDLT--GIEYAHNIKDLTINNIHAT---NYNPISGLSNLERLRIMGKDVTSDKIPNLS--GLTS 113 (197)
T ss_dssp HHHHTCCEEEEESSCCSCCT--TGGGCTTCSEEEEESCCCS---CCGGGTTCTTCCEEEEECTTCBGGGSCCCT--TCTT
T ss_pred hhcCCccEEeccCCCccChH--HHhcCCCCCEEEccCCCCC---cchhhhcCCCCCEEEeECCccCcccChhhc--CCCC
Confidence 44555555555555555444 2555666666666666553 234566666666666766666666666666 5777
Q ss_pred ccEEEccCCcccCcCCccccCCCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccCCcCcCCCCCCCCCCCCCEEEcc
Q 002255 189 LMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPLPDLSGLSSLQDFSVR 268 (947)
Q Consensus 189 L~~L~Ls~N~l~~~~p~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~ 268 (947)
|++|+|++|++++..|..+ ..+++|+.|+|++|.+.+.++.+..+++|++|+++
T Consensus 114 L~~L~Ls~n~i~~~~~~~l--------------------------~~l~~L~~L~L~~n~~i~~~~~l~~l~~L~~L~l~ 167 (197)
T 4ezg_A 114 LTLLDISHSAHDDSILTKI--------------------------NTLPKVNSIDLSYNGAITDIMPLKTLPELKSLNIQ 167 (197)
T ss_dssp CCEEECCSSBCBGGGHHHH--------------------------TTCSSCCEEECCSCTBCCCCGGGGGCSSCCEEECT
T ss_pred CCEEEecCCccCcHhHHHH--------------------------hhCCCCCEEEccCCCCccccHhhcCCCCCCEEECC
Confidence 7777777777775554433 34677777777777733344567777788888888
Q ss_pred CCccccCCCccccCCCCCCeEeccCCcccc
Q 002255 269 DNQLTGIVPSSLVNLHSLAVVNLTNNLFQG 298 (947)
Q Consensus 269 ~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g 298 (947)
+|++++ ++ .+..+++|+.|++++|++.+
T Consensus 168 ~n~i~~-~~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 168 FDGVHD-YR-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp TBCCCC-CT-TGGGCSSCCEEEECBC----
T ss_pred CCCCcC-hH-HhccCCCCCEEEeeCcccCC
Confidence 888874 44 67778888888888888753
No 370
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.71 E-value=7.2e-20 Score=218.95 Aligned_cols=131 Identities=13% Similarity=0.183 Sum_probs=87.9
Q ss_pred CcEEEEEecCCcccccCccccc-CCCCCCEEEcccC-cccCc-CCC-CCCCCCCcEEecCCCcCCCCCccccc----CCC
Q 002255 65 NRVTRIQIGGQNIEGTLPKELN-SLSSLTVLEVMKN-KLTGQ-IPS-LSGLSSLQEVLFDDNNFTSVPSDFFK----GLT 136 (947)
Q Consensus 65 ~~v~~l~L~~~~l~g~~p~~l~-~l~~L~~L~L~~N-~l~~~-~p~-~~~l~~L~~L~L~~n~l~~~~~~~~~----~l~ 136 (947)
.+++.|+|+++.+++..+..+. .+++|++|+|++| .++.. ++. +.++++|++|+|++|.+++..+..+. .++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 4688888888888877666665 6788888888888 45442 333 34688888888888887765544333 566
Q ss_pred CCcEEeccCCC--CCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCC
Q 002255 137 SLQTISLDYNS--FDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFN 197 (947)
Q Consensus 137 ~L~~L~Ls~N~--l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N 197 (947)
+|++|+|++|. +....++..+.++++|++|++++|...+.+|..+. .+++|++|+++.+
T Consensus 185 ~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~--~~~~L~~L~l~~~ 245 (594)
T 2p1m_B 185 SLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQ--RAPQLEELGTGGY 245 (594)
T ss_dssp CCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHH--HCTTCSEEECSBC
T ss_pred cCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHh--cCCcceEcccccc
Confidence 88888888886 22111223334568888888888833223666555 5677777775544
No 371
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.70 E-value=1.4e-18 Score=210.36 Aligned_cols=162 Identities=21% Similarity=0.150 Sum_probs=94.7
Q ss_pred CCCCEEEcccCcccCcCCCCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCCcccccCCCCCCeEec
Q 002255 89 SSLTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSA 168 (947)
Q Consensus 89 ~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l 168 (947)
+.++.|+|.+|.+..... ..|+.++|+.|.|.+ ++++.|.+. ..+..+..++.|+.|+|
T Consensus 173 ~~~~~l~L~~n~~~~~~~-----~~l~~l~Ls~~~i~~--------------~~~~~n~~~--~~~~~~~~l~~L~~L~L 231 (727)
T 4b8c_D 173 PLTPKIELFANGKDEANQ-----ALLQHKKLSQYSIDE--------------DDDIENRMV--MPKDSKYDDQLWHALDL 231 (727)
T ss_dssp ----------------------------------------------------------------------CCCCCCEEEC
T ss_pred CccceEEeeCCCCCcchh-----hHhhcCccCcccccC--------------cccccccee--cChhhhccCCCCcEEEC
Confidence 456677777776665322 224445555554433 345556653 35778888888899999
Q ss_pred cCceeeeccCcccCCCCCCCccEEEccCCcccCcCCccccCCCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccCCc
Q 002255 169 NGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNS 248 (947)
Q Consensus 169 ~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~ 248 (947)
++|.+. .+|..++ .+++|++|+|++|+|+ .+|..|+ ++++|+.|+|++|.
T Consensus 232 s~n~l~-~l~~~~~--~l~~L~~L~Ls~N~l~-~lp~~~~--------------------------~l~~L~~L~Ls~N~ 281 (727)
T 4b8c_D 232 SNLQIF-NISANIF--KYDFLTRLYLNGNSLT-ELPAEIK--------------------------NLSNLRVLDLSHNR 281 (727)
T ss_dssp TTSCCS-CCCGGGG--GCCSCSCCBCTTSCCS-CCCGGGG--------------------------GGTTCCEEECTTSC
T ss_pred CCCCCC-CCChhhc--CCCCCCEEEeeCCcCc-ccChhhh--------------------------CCCCCCEEeCcCCc
Confidence 888887 6776666 6888888888888888 7776554 48899999999999
Q ss_pred CcCCCCCCCCCCCCCEEEccCCccccCCCccccCCCCCCeEeccCCcccccCCC
Q 002255 249 FTGPLPDLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQTPK 302 (947)
Q Consensus 249 l~~~~~~~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~ 302 (947)
|+..+..+..+++|++|+|++|.|+ .+|..|+++++|+.|+|++|+|+|.+|.
T Consensus 282 l~~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~ 334 (727)
T 4b8c_D 282 LTSLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLK 334 (727)
T ss_dssp CSSCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHH
T ss_pred CCccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChH
Confidence 9955446888999999999999997 7888899999999999999999887765
No 372
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.70 E-value=3.3e-17 Score=165.54 Aligned_cols=153 Identities=14% Similarity=0.219 Sum_probs=90.3
Q ss_pred cCCCCCCEEEcccCcccCcCCCCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCCcccccCCCCCCe
Q 002255 86 NSLSSLTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQR 165 (947)
Q Consensus 86 ~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~ 165 (947)
..+++|+.|++++|.++ .+|.+..+++|++|++++|.++.++ .+..+++|++|+|++|++.. ..+..++.+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~~l~~l~~L~~L~l~~n~~~~~~--~l~~l~~L~~L~l~~n~l~~-~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLTGIEYAHNIKDLTINNIHATNYN--PISGLSNLERLRIMGKDVTS-DKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCTTGGGCTTCSEEEEESCCCSCCG--GGTTCTTCCEEEEECTTCBG-GGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChHHHhcCCCCCEEEccCCCCCcch--hhhcCCCCCEEEeECCccCc-ccChhhcCCCCCCE
Confidence 34455666666666665 2335555666666666666554432 35566666666666666643 34555666666666
Q ss_pred EeccCceeeeccCcccCCCCCCCccEEEccCCc-ccCcCCccccCCCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEc
Q 002255 166 FSANGANITGTIPDFLGGDTIPGLMHLHLAFNF-LQGPIPLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWL 244 (947)
Q Consensus 166 L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L 244 (947)
|++++|.+++..|..+. .+++|++|+|++|+ ++ .+| . +.++++|+.|+|
T Consensus 117 L~Ls~n~i~~~~~~~l~--~l~~L~~L~L~~n~~i~-~~~-~--------------------------l~~l~~L~~L~l 166 (197)
T 4ezg_A 117 LDISHSAHDDSILTKIN--TLPKVNSIDLSYNGAIT-DIM-P--------------------------LKTLPELKSLNI 166 (197)
T ss_dssp EECCSSBCBGGGHHHHT--TCSSCCEEECCSCTBCC-CCG-G--------------------------GGGCSSCCEEEC
T ss_pred EEecCCccCcHhHHHHh--hCCCCCEEEccCCCCcc-ccH-h--------------------------hcCCCCCCEEEC
Confidence 66666666666666665 56677777777776 33 333 1 234666777777
Q ss_pred cCCcCcCCCCCCCCCCCCCEEEccCCccc
Q 002255 245 HGNSFTGPLPDLSGLSSLQDFSVRDNQLT 273 (947)
Q Consensus 245 ~~N~l~~~~~~~~~l~~L~~L~l~~N~l~ 273 (947)
++|.+++.. .+..+++|++|++++|+|.
T Consensus 167 ~~n~i~~~~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 167 QFDGVHDYR-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp TTBCCCCCT-TGGGCSSCCEEEECBC---
T ss_pred CCCCCcChH-HhccCCCCCEEEeeCcccC
Confidence 777766533 5666677777777777765
No 373
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.69 E-value=2.2e-17 Score=174.87 Aligned_cols=167 Identities=18% Similarity=0.258 Sum_probs=138.8
Q ss_pred EEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCCCCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEeccCC
Q 002255 67 VTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYN 146 (947)
Q Consensus 67 v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N 146 (947)
++.++++++.+++. + .+..+++|+.|++++|.++. ++.+..+++|++|+|++|+++++++ +..+++|++|+|++|
T Consensus 21 l~~l~l~~~~i~~~-~-~~~~l~~L~~L~l~~n~i~~-l~~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N 95 (263)
T 1xeu_A 21 AVKQNLGKQSVTDL-V-SQKELSGVQNFNGDNSNIQS-LAGMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRN 95 (263)
T ss_dssp HHHHHHTCSCTTSE-E-CHHHHTTCSEEECTTSCCCC-CTTGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSS
T ss_pred HHHHHhcCCCcccc-c-chhhcCcCcEEECcCCCccc-chHHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCC
Confidence 44556677777643 3 57889999999999999985 4588899999999999999999887 889999999999999
Q ss_pred CCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCcccCcCCccccCCCCceeeeccCCCCCCC
Q 002255 147 SFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDSKL 226 (947)
Q Consensus 147 ~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~l~~n~~~~~~ 226 (947)
++.+ +|.... ++|++|+|++|++++. + .+. .+++|++|+|++|++++. + .
T Consensus 96 ~l~~--l~~~~~--~~L~~L~L~~N~l~~~-~-~l~--~l~~L~~L~Ls~N~i~~~-~-~-------------------- 145 (263)
T 1xeu_A 96 RLKN--LNGIPS--ACLSRLFLDNNELRDT-D-SLI--HLKNLEILSIRNNKLKSI-V-M-------------------- 145 (263)
T ss_dssp CCSC--CTTCCC--SSCCEEECCSSCCSBS-G-GGT--TCTTCCEEECTTSCCCBC-G-G--------------------
T ss_pred ccCC--cCcccc--CcccEEEccCCccCCC-h-hhc--CcccccEEECCCCcCCCC-h-H--------------------
Confidence 9976 454333 8999999999999864 4 455 689999999999999854 2 2
Q ss_pred CCchhhhcCCCCCcEEEccCCcCcCCCCCCCCCCCCCEEEccCCccccC
Q 002255 227 NGSVAVIQNMTSLTQLWLHGNSFTGPLPDLSGLSSLQDFSVRDNQLTGI 275 (947)
Q Consensus 227 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~g~ 275 (947)
+..+++|+.|+|++|++++. +.+..+++|+.|++++|.+++.
T Consensus 146 ------l~~l~~L~~L~L~~N~i~~~-~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 146 ------LGFLSKLEVLDLHGNEITNT-GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp ------GGGCTTCCEEECTTSCCCBC-TTSTTCCCCCEEEEEEEEEECC
T ss_pred ------HccCCCCCEEECCCCcCcch-HHhccCCCCCEEeCCCCcccCC
Confidence 34589999999999999987 7788999999999999999865
No 374
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.66 E-value=7.4e-19 Score=210.18 Aligned_cols=328 Identities=13% Similarity=0.109 Sum_probs=207.4
Q ss_pred CcEEEEEecCC-ccccc-CcccccCCCCCCEEEcccCcccCcCC----C-CCCCCCCcEEecCCCcCCCCCccc----cc
Q 002255 65 NRVTRIQIGGQ-NIEGT-LPKELNSLSSLTVLEVMKNKLTGQIP----S-LSGLSSLQEVLFDDNNFTSVPSDF----FK 133 (947)
Q Consensus 65 ~~v~~l~L~~~-~l~g~-~p~~l~~l~~L~~L~L~~N~l~~~~p----~-~~~l~~L~~L~L~~n~l~~~~~~~----~~ 133 (947)
.+++.|+|.+| .+... ++..+.++++|++|+|++|.+++..+ . ...+++|++|+|++|. ..+.... +.
T Consensus 130 ~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~-~~~~~~~l~~l~~ 208 (594)
T 2p1m_B 130 KNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLA-SEVSFSALERLVT 208 (594)
T ss_dssp TTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCC-SCCCHHHHHHHHH
T ss_pred CCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccC-CcCCHHHHHHHHH
Confidence 47999999998 55543 44555689999999999999877543 2 3368899999999997 3333332 34
Q ss_pred CCCCCcEEeccCCCCCCCCCcccccCCCCCCeEeccCce--------------------------ee----eccCcccCC
Q 002255 134 GLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGAN--------------------------IT----GTIPDFLGG 183 (947)
Q Consensus 134 ~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~--------------------------l~----~~~p~~~~~ 183 (947)
.+++|++|+|++|.... .++..+.++++|++|++..+. +. +.++..+.
T Consensus 209 ~~~~L~~L~L~~~~~~~-~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~~~l~~~~~- 286 (594)
T 2p1m_B 209 RCPNLKSLKLNRAVPLE-KLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYS- 286 (594)
T ss_dssp HCTTCCEEECCTTSCHH-HHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCGGGGGGGHH-
T ss_pred hCCCCcEEecCCCCcHH-HHHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccchhhHHHHHH-
Confidence 56999999999984322 267777788888888765442 11 12333222
Q ss_pred CCCCCccEEEccCCcccCcCCcc-c-cCCCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccC---------CcCcCC
Q 002255 184 DTIPGLMHLHLAFNFLQGPIPLS-F-GKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHG---------NSFTGP 252 (947)
Q Consensus 184 ~~l~~L~~L~Ls~N~l~~~~p~~-~-~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~---------N~l~~~ 252 (947)
.+++|++|+|++|.+++..... + ...+|+.|++++| +.. .+.......+++|+.|+|++ |.+++.
T Consensus 287 -~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~--~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~ 362 (594)
T 2p1m_B 287 -VCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IED--AGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQ 362 (594)
T ss_dssp -HHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHH--HHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHH
T ss_pred -hhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCH--HHHHHHHHhCCCCCEEEEecCcccccccCCCCCHH
Confidence 4689999999999987544332 2 2268999999987 221 11122233589999999944 444432
Q ss_pred CC-CC-CCCCCCCEEEccCCccccCCCcccc-CCCCCCeEecc--C----CcccccCCCCCCCcccccccCCCCcccCcC
Q 002255 253 LP-DL-SGLSSLQDFSVRDNQLTGIVPSSLV-NLHSLAVVNLT--N----NLFQGQTPKFNSPVRFDMAKGSNSFCLDDA 323 (947)
Q Consensus 253 ~~-~~-~~l~~L~~L~l~~N~l~g~~p~~l~-~l~~L~~L~Ls--~----N~l~g~~p~~~~~~~~~~~~~~~~~~~~~~ 323 (947)
.. .+ .++++|+.|++..|++++..+..+. .+++|+.|+|+ + |.+++...+. ....-+....++..++..
T Consensus 363 ~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~--~~~~l~~~~~~L~~L~L~ 440 (594)
T 2p1m_B 363 GLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDI--GFGAIVEHCKDLRRLSLS 440 (594)
T ss_dssp HHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHH--HHHHHHHHCTTCCEEECC
T ss_pred HHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhh--HHHHHHhhCCCccEEeec
Confidence 11 22 2478999999999999877666665 58999999999 3 4444211100 000000000111111110
Q ss_pred CCcCCCccceeeecccccCChhhhhccCCCCCCCCCCCCCcccCCCCceeEEEecCCCceeeccccc-cCCccCCeEecc
Q 002255 324 GVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLSGTISSNF-SRLTSLRQLMLS 402 (947)
Q Consensus 324 ~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g~ip~~~-~~l~~L~~L~Ls 402 (947)
. .+... .+. . .....++|+.|+|++|.+++..+..+ ..+++|+.|+|+
T Consensus 441 ~-~l~~~------~~~------~------------------l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~ 489 (594)
T 2p1m_B 441 G-LLTDK------VFE------Y------------------IGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIR 489 (594)
T ss_dssp S-SCCHH------HHH------H------------------HHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEE
T ss_pred C-cccHH------HHH------H------------------HHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECc
Confidence 0 00000 000 0 00114578899999999887665555 678899999999
Q ss_pred CCcccccCCCc-CCCCCCCCccccccccccc
Q 002255 403 GNELTGTIPKE-LTTLPSLEMLDVSNNHLFG 432 (947)
Q Consensus 403 ~N~l~g~iP~~-l~~l~~L~~L~ls~N~l~g 432 (947)
+|.+++..+.. +..+++|+.|+|++|+++.
T Consensus 490 ~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~ 520 (594)
T 2p1m_B 490 DCPFGDKALLANASKLETMRSLWMSSCSVSF 520 (594)
T ss_dssp SCSCCHHHHHHTGGGGGGSSEEEEESSCCBH
T ss_pred CCCCcHHHHHHHHHhCCCCCEEeeeCCCCCH
Confidence 99987655543 3458899999999998853
No 375
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.66 E-value=5.4e-16 Score=155.74 Aligned_cols=133 Identities=20% Similarity=0.254 Sum_probs=109.0
Q ss_pred cEEEccCCcCcCCCCCCCCCCCCCEEEccCCccccCCCc-cccCCCCCCeEeccCCcccccCCCCCCCcccccccCCCCc
Q 002255 240 TQLWLHGNSFTGPLPDLSGLSSLQDFSVRDNQLTGIVPS-SLVNLHSLAVVNLTNNLFQGQTPKFNSPVRFDMAKGSNSF 318 (947)
Q Consensus 240 ~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~g~~p~-~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~~~~~~ 318 (947)
+.|++++|.++..+..+.. +|++|+|++|+|++..+. .+.++++|++|+|++|++++.+|..+.
T Consensus 11 ~~l~~s~~~l~~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~------------- 75 (192)
T 1w8a_A 11 TTVDCTGRGLKEIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFE------------- 75 (192)
T ss_dssp TEEECTTSCCSSCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTT-------------
T ss_pred CEEEcCCCCcCcCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcC-------------
Confidence 6788888888765554543 888899999988866554 488888999999999988877665322
Q ss_pred ccCcCCCcCCCccceeeecccccCChhhhhccCCCCCCCCCCCCCcccCCCCceeEEEecCCCceeeccccccCCccCCe
Q 002255 319 CLDDAGVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLSGTISSNFSRLTSLRQ 398 (947)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g~ip~~~~~l~~L~~ 398 (947)
...+|+.|+|++|+|++..|..|.++++|++
T Consensus 76 -------------------------------------------------~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 106 (192)
T 1w8a_A 76 -------------------------------------------------GASHIQELQLGENKIKEISNKMFLGLHQLKT 106 (192)
T ss_dssp -------------------------------------------------TCTTCCEEECCSCCCCEECSSSSTTCTTCCE
T ss_pred -------------------------------------------------CcccCCEEECCCCcCCccCHHHhcCCCCCCE
Confidence 2346888999999999888888999999999
Q ss_pred EeccCCcccccCCCcCCCCCCCCccccccccccccCCC
Q 002255 399 LMLSGNELTGTIPKELTTLPSLEMLDVSNNHLFGKVPN 436 (947)
Q Consensus 399 L~Ls~N~l~g~iP~~l~~l~~L~~L~ls~N~l~g~iP~ 436 (947)
|+|++|+|++.+|..|..+++|++|+|++|+|+|..|.
T Consensus 107 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 144 (192)
T 1w8a_A 107 LNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHL 144 (192)
T ss_dssp EECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGG
T ss_pred EECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcc
Confidence 99999999998899999999999999999999998874
No 376
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.65 E-value=5e-16 Score=156.02 Aligned_cols=131 Identities=18% Similarity=0.300 Sum_probs=117.5
Q ss_pred EEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCCC--CCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEeccC
Q 002255 68 TRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIPS--LSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDY 145 (947)
Q Consensus 68 ~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p~--~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 145 (947)
+.|+++++++. .+|..+.. +|++|+|++|++++.++. |.++++|++|+|++|+|+++++..|..+++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 35677777885 78877754 999999999999998874 89999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCcccCcCC
Q 002255 146 NSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIP 204 (947)
Q Consensus 146 N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p 204 (947)
|+|.+ ..+..+.++++|++|+|++|++++.+|..+. .+++|++|+|++|.+++..+
T Consensus 88 N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKE-ISNKMFLGLHQLKTLNLYDNQISCVMPGSFE--HLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCE-ECSSSSTTCTTCCEEECCSSCCCEECTTSST--TCTTCCEEECTTCCBCCSGG
T ss_pred CcCCc-cCHHHhcCCCCCCEEECCCCcCCeeCHHHhh--cCCCCCEEEeCCCCccCcCc
Confidence 99976 5677799999999999999999999999988 78999999999999997654
No 377
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.63 E-value=5.9e-16 Score=169.02 Aligned_cols=140 Identities=13% Similarity=0.100 Sum_probs=101.9
Q ss_pred CCCcCceecccCceEEEEEEEcCCcEEEEEEecccccC------------hHH--------HHHHHHHHHHHHcCCCCCc
Q 002255 591 NFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVS------------EKG--------FAEFKSEIAVLTKVRHRHL 650 (947)
Q Consensus 591 ~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~------------~~~--------~~~~~~E~~~l~~l~h~ni 650 (947)
-|++.+.||+|+||.||+|...+|+.||||+++....+ ... .....+|...|.++.+.++
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 38999999999999999999889999999987643211 000 0112457777777765544
Q ss_pred ceEEEEEEeCCeeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEc
Q 002255 651 VGLLGYCLDGNERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLG 730 (947)
Q Consensus 651 v~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~ 730 (947)
....-+... ..+|||||++|++|.++... .....++.|++.+|.|||. .+||||||||.|||++
T Consensus 176 ~vp~p~~~~--~~~LVME~i~G~~L~~l~~~-----------~~~~~l~~qll~~l~~lH~---~gIVHrDLKp~NILl~ 239 (397)
T 4gyi_A 176 PVPEPIAQS--RHTIVMSLVDALPMRQVSSV-----------PDPASLYADLIALILRLAK---HGLIHGDFNEFNILIR 239 (397)
T ss_dssp SCCCEEEEE--TTEEEEECCSCEEGGGCCCC-----------SCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEE
T ss_pred CCCeeeecc--CceEEEEecCCccHhhhccc-----------HHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEe
Confidence 322222222 23799999999888655311 1234678999999999996 8999999999999998
Q ss_pred CCC----------cEEEeecCcceec
Q 002255 731 DDM----------RAKVADFGLVRLA 746 (947)
Q Consensus 731 ~~~----------~~kl~DfGla~~~ 746 (947)
+++ .+.|+||+-+...
T Consensus 240 ~dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 240 EEKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp EEECSSCTTSEEEEEEECCCTTCEET
T ss_pred CCCCcccccccccceEEEEeCCcccC
Confidence 876 3899999976543
No 378
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.61 E-value=3e-15 Score=148.29 Aligned_cols=134 Identities=22% Similarity=0.369 Sum_probs=112.6
Q ss_pred CCCceeEeCCCCcEEEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCcCCCCCcccc
Q 002255 54 CKWKHIQCSPSNRVTRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNFTSVPSDFF 132 (947)
Q Consensus 54 C~w~gv~C~~~~~v~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~l~~~~~~~~ 132 (947)
|.|.+|.|+ +++++ .+|..+. ++|+.|+|++|++++.++ .|.++++|++|+|++|+++++++..|
T Consensus 7 C~~~~l~~~-----------~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 72 (177)
T 2o6r_A 7 CSGTEIRCN-----------SKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVF 72 (177)
T ss_dssp EETTEEECC-----------SSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTT
T ss_pred eCCCEEEec-----------CCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHc
Confidence 567777775 34454 5565443 799999999999998777 57899999999999999999999999
Q ss_pred cCCCCCcEEeccCCCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCcccCcCC
Q 002255 133 KGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIP 204 (947)
Q Consensus 133 ~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p 204 (947)
..+++|++|+|++|++.+ ..+..+..+++|++|++++|++++..+..+. .+++|++|+|++|.+++..|
T Consensus 73 ~~l~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~--~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 73 DKLTKLTILYLHENKLQS-LPNGVFDKLTQLKELALDTNQLKSVPDGIFD--RLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp TTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCSCCCTTTTT--TCTTCCEEECCSSCBCCCHH
T ss_pred cCCCccCEEECCCCCccc-cCHHHhhCCcccCEEECcCCcceEeCHHHhc--CCcccCEEEecCCCeeccCc
Confidence 999999999999999976 5556688999999999999999966665565 68999999999999997665
No 379
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.61 E-value=8.2e-16 Score=150.95 Aligned_cols=137 Identities=17% Similarity=0.168 Sum_probs=117.8
Q ss_pred CcEEEEEecCCccc-ccCcccccCCCCCCEEEcccCcccCcCCCCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEec
Q 002255 65 NRVTRIQIGGQNIE-GTLPKELNSLSSLTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISL 143 (947)
Q Consensus 65 ~~v~~l~L~~~~l~-g~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (947)
.+++.|+|++|+++ +.+|..+..+++|++|+|++|.+++. +.+..+++|++|+|++|++++.++..+..+++|++|+|
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 102 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNL 102 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC-SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEEC
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh-hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEec
Confidence 57899999999998 88898899999999999999999887 88999999999999999999988888888999999999
Q ss_pred cCCCCCCCCCcccccCCCCCCeEeccCceeeeccC---cccCCCCCCCccEEEccCCcccCcCCc
Q 002255 144 DYNSFDSWVIPESLKDATGLQRFSANGANITGTIP---DFLGGDTIPGLMHLHLAFNFLQGPIPL 205 (947)
Q Consensus 144 s~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p---~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 205 (947)
++|++.+...+..+..+++|++|++++|.+++..+ ..+. .+++|++|++++|.+. .+|.
T Consensus 103 s~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~--~l~~L~~L~l~~n~~~-~~~~ 164 (168)
T 2ell_A 103 SGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFK--LLPQLTYLDGYDREDQ-EAPD 164 (168)
T ss_dssp BSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHT--TCSSCCEETTEETTSC-BCCS
T ss_pred cCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHH--hCccCcEecCCCCChh-hccc
Confidence 99999762233788999999999999999986655 3665 6889999999999887 4443
No 380
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.57 E-value=1.6e-15 Score=145.65 Aligned_cols=128 Identities=18% Similarity=0.230 Sum_probs=90.8
Q ss_pred CcEEEEEecCCccc-ccCcccccCCCCCCEEEcccCcccCcCCCCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEec
Q 002255 65 NRVTRIQIGGQNIE-GTLPKELNSLSSLTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISL 143 (947)
Q Consensus 65 ~~v~~l~L~~~~l~-g~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (947)
.+++.|++++|+++ +.+|..+..+++|++|+|++|.+++. +.+.++++|++|+|++|++++.+|..+..+++|++|+|
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 95 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI-ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNL 95 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC-TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEEC
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc-hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEEC
Confidence 35777777777777 67777777777777777777777766 66777777777777777777766666666777777777
Q ss_pred cCCCCCCCCCcccccCCCCCCeEeccCceeeeccC---cccCCCCCCCccEEEcc
Q 002255 144 DYNSFDSWVIPESLKDATGLQRFSANGANITGTIP---DFLGGDTIPGLMHLHLA 195 (947)
Q Consensus 144 s~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p---~~~~~~~l~~L~~L~Ls 195 (947)
++|++.+...+..+..+++|++|++++|.+++..+ ..+. .+++|++|+++
T Consensus 96 s~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~--~l~~L~~L~l~ 148 (149)
T 2je0_A 96 SGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFK--LLPQLTYLDGY 148 (149)
T ss_dssp TTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHH--HCTTCCEETTB
T ss_pred CCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHH--HCCCcccccCC
Confidence 77777652233667777777777777777775544 3444 56677777665
No 381
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.56 E-value=1.1e-14 Score=146.23 Aligned_cols=127 Identities=22% Similarity=0.338 Sum_probs=111.5
Q ss_pred EEEecCCcccccCcccccCCCCCCEEEcccCcccCcCCCCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEeccCCCC
Q 002255 69 RIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSF 148 (947)
Q Consensus 69 ~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 148 (947)
.+++++++++ .+|..+. ++|++|+|++|+|+..+..|.++++|++|+|++|+|+++++..|.++++|++|+|++|+|
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l 90 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 90 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCSCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCchhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCcc
Confidence 4677778887 7777664 689999999999985555899999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCcccC
Q 002255 149 DSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQG 201 (947)
Q Consensus 149 ~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~ 201 (947)
.. ..|..|..+++|++|+|++|.|++..+..|. .+++|++|+|++|.+..
T Consensus 91 ~~-i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 91 RC-IPPRTFDGLKSLRLLSLHGNDISVVPEGAFN--DLSALSHLAIGANPLYC 140 (193)
T ss_dssp CB-CCTTTTTTCTTCCEEECCSSCCCBCCTTTTT--TCTTCCEEECCSSCEEC
T ss_pred CE-eCHHHhCCCCCCCEEECCCCCCCeeChhhhh--cCccccEEEeCCCCeec
Confidence 76 5667899999999999999999976666676 68999999999999974
No 382
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.56 E-value=6.5e-15 Score=144.49 Aligned_cols=133 Identities=20% Similarity=0.209 Sum_probs=84.0
Q ss_pred CCCcEEeccCCCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCcccCcCCccccCCCCcee
Q 002255 136 TSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTL 215 (947)
Q Consensus 136 ~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L 215 (947)
++|++|+|++|++..+.+|..+..+++|++|++++|.+++. ..+. .+++|++|+|++|++++.+|..+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~--~l~~L~~L~Ls~N~l~~~~~~~~-------- 91 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLP--KLPKLKKLELSENRIFGGLDMLA-------- 91 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCC--CCSSCCEEEEESCCCCSCCCHHH--------
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhc--cCCCCCEEECcCCcCchHHHHHH--------
Confidence 44555555555554223444445555555555555555543 3444 46677777777777775555433
Q ss_pred eeccCCCCCCCCCchhhhcCCCCCcEEEccCCcCcCCC--CCCCCCCCCCEEEccCCccccCCC---ccccCCCCCCeEe
Q 002255 216 WLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPL--PDLSGLSSLQDFSVRDNQLTGIVP---SSLVNLHSLAVVN 290 (947)
Q Consensus 216 ~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~l~~L~~L~l~~N~l~g~~p---~~l~~l~~L~~L~ 290 (947)
.++++|+.|+|++|.+++.. +.+..+++|++|++++|.+++..+ ..+..+++|++|+
T Consensus 92 ------------------~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~ 153 (168)
T 2ell_A 92 ------------------EKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLD 153 (168)
T ss_dssp ------------------HHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEET
T ss_pred ------------------hhCCCCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEec
Confidence 23677777777777777654 457777888888888888885544 4778888888888
Q ss_pred ccCCcccc
Q 002255 291 LTNNLFQG 298 (947)
Q Consensus 291 Ls~N~l~g 298 (947)
+++|.+..
T Consensus 154 l~~n~~~~ 161 (168)
T 2ell_A 154 GYDREDQE 161 (168)
T ss_dssp TEETTSCB
T ss_pred CCCCChhh
Confidence 88887764
No 383
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.56 E-value=5.2e-15 Score=141.94 Aligned_cols=106 Identities=23% Similarity=0.279 Sum_probs=70.1
Q ss_pred CCCCcEEEccCCcCcCCCCCCCCCCCCCEEEccCCccccCCCccccCCCCCCeEeccCCcccccCCCCCCCcccccccCC
Q 002255 236 MTSLTQLWLHGNSFTGPLPDLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQTPKFNSPVRFDMAKGS 315 (947)
Q Consensus 236 l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~~~ 315 (947)
+++|+.|+|++|.+++. +.+..+++|++|++++|++++.+|..+..+++|++|+|++|++++.
T Consensus 41 l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~---------------- 103 (149)
T 2je0_A 41 FEELEFLSTINVGLTSI-ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDL---------------- 103 (149)
T ss_dssp CTTCCEEECTTSCCCCC-TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSH----------------
T ss_pred cCCCcEEECcCCCCCCc-hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCCh----------------
Confidence 56666666666666655 5556666666666666666655666665666666666666665421
Q ss_pred CCcccCcCCCcCCCccceeeecccccCChhhhhccCCCCCCCCCCCCCcccCCCCceeEEEecCCCceeeccccccCCcc
Q 002255 316 NSFCLDDAGVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLSGTISSNFSRLTS 395 (947)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g~ip~~~~~l~~ 395 (947)
..|..++.+++
T Consensus 104 ---------------------------------------------------------------------~~~~~~~~l~~ 114 (149)
T 2je0_A 104 ---------------------------------------------------------------------STIEPLKKLEN 114 (149)
T ss_dssp ---------------------------------------------------------------------HHHGGGGGCTT
T ss_pred ---------------------------------------------------------------------HHHHHHhhCCC
Confidence 13356777888
Q ss_pred CCeEeccCCcccccCC---CcCCCCCCCCcccccc
Q 002255 396 LRQLMLSGNELTGTIP---KELTTLPSLEMLDVSN 427 (947)
Q Consensus 396 L~~L~Ls~N~l~g~iP---~~l~~l~~L~~L~ls~ 427 (947)
|+.|+|++|++++..+ ..+..+++|+.||+++
T Consensus 115 L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 115 LKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 8888888888885444 3678888888888864
No 384
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.56 E-value=1.7e-14 Score=142.79 Aligned_cols=134 Identities=21% Similarity=0.241 Sum_probs=105.5
Q ss_pred CcEEEccCCcCcCCCCCCCCCCCCCEEEccCCccccCCCccccCCCCCCeEeccCCcccccCCCCCCCcccccccCCCCc
Q 002255 239 LTQLWLHGNSFTGPLPDLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQTPKFNSPVRFDMAKGSNSF 318 (947)
Q Consensus 239 L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~~~~~~ 318 (947)
.+.+++++|+++..+..+ .++|+.|++++|++++..+..+.++++|++|+|++|++++..+..+
T Consensus 9 ~~~l~~~~~~l~~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~-------------- 72 (177)
T 2o6r_A 9 GTEIRCNSKGLTSVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVF-------------- 72 (177)
T ss_dssp TTEEECCSSCCSSCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTT--------------
T ss_pred CCEEEecCCCCccCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHc--------------
Confidence 467788888887665443 3678888888888887666677888888888888888876544321
Q ss_pred ccCcCCCcCCCccceeeecccccCChhhhhccCCCCCCCCCCCCCcccCCCCceeEEEecCCCceeeccccccCCccCCe
Q 002255 319 CLDDAGVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLSGTISSNFSRLTSLRQ 398 (947)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g~ip~~~~~l~~L~~ 398 (947)
....+|+.|+|++|++++..+..+.++++|+.
T Consensus 73 ------------------------------------------------~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 104 (177)
T 2o6r_A 73 ------------------------------------------------DKLTKLTILYLHENKLQSLPNGVFDKLTQLKE 104 (177)
T ss_dssp ------------------------------------------------TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred ------------------------------------------------cCCCccCEEECCCCCccccCHHHhhCCcccCE
Confidence 12346888888888888777777899999999
Q ss_pred EeccCCcccccCCCcCCCCCCCCccccccccccccCCC
Q 002255 399 LMLSGNELTGTIPKELTTLPSLEMLDVSNNHLFGKVPN 436 (947)
Q Consensus 399 L~Ls~N~l~g~iP~~l~~l~~L~~L~ls~N~l~g~iP~ 436 (947)
|+|++|+|++..+..+..+++|+.|+|++|+++|.+|.
T Consensus 105 L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 105 LALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp EECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred EECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 99999999954445578899999999999999998883
No 385
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.56 E-value=2.3e-14 Score=143.74 Aligned_cols=131 Identities=21% Similarity=0.287 Sum_probs=111.0
Q ss_pred cEEEccCCcCcCCCCCCCCCCCCCEEEccCCccccCCCccccCCCCCCeEeccCCcccccCCCCCCCcccccccCCCCcc
Q 002255 240 TQLWLHGNSFTGPLPDLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQTPKFNSPVRFDMAKGSNSFC 319 (947)
Q Consensus 240 ~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~~~~~~~ 319 (947)
+.+++++|.++..+..+. ++|++|+|++|+|+ .+|..|.++++|+.|+|++|++++..+..+
T Consensus 13 ~~l~~~~~~l~~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f--------------- 74 (193)
T 2wfh_A 13 TVVRCSNKGLKVLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSF--------------- 74 (193)
T ss_dssp TEEECTTSCCSSCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTT---------------
T ss_pred CEEEcCCCCCCcCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHc---------------
Confidence 578999999986655543 68999999999998 788999999999999999999987665422
Q ss_pred cCcCCCcCCCccceeeecccccCChhhhhccCCCCCCCCCCCCCcccCCCCceeEEEecCCCceeeccccccCCccCCeE
Q 002255 320 LDDAGVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLSGTISSNFSRLTSLRQL 399 (947)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g~ip~~~~~l~~L~~L 399 (947)
..+.+|+.|+|++|.|++..|..|..+++|+.|
T Consensus 75 -----------------------------------------------~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L 107 (193)
T 2wfh_A 75 -----------------------------------------------SNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLL 107 (193)
T ss_dssp -----------------------------------------------TTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEE
T ss_pred -----------------------------------------------cCCCCCCEEECCCCccCEeCHHHhCCCCCCCEE
Confidence 223478999999999998888899999999999
Q ss_pred eccCCcccccCCCcCCCCCCCCccccccccccccCC
Q 002255 400 MLSGNELTGTIPKELTTLPSLEMLDVSNNHLFGKVP 435 (947)
Q Consensus 400 ~Ls~N~l~g~iP~~l~~l~~L~~L~ls~N~l~g~iP 435 (947)
+|++|+|++..+..|..+++|+.|+|++|++.+...
T Consensus 108 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 108 SLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp ECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred ECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCc
Confidence 999999995555579999999999999999987654
No 386
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.51 E-value=4.4e-15 Score=163.01 Aligned_cols=285 Identities=12% Similarity=0.160 Sum_probs=143.5
Q ss_pred cEEEEEecCCcccccCcccccC-CCCCCEEEcccCcccCcCCCCCCCCCCcEEecCCCcCCCCCcccccC--------CC
Q 002255 66 RVTRIQIGGQNIEGTLPKELNS-LSSLTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKG--------LT 136 (947)
Q Consensus 66 ~v~~l~L~~~~l~g~~p~~l~~-l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~n~l~~~~~~~~~~--------l~ 136 (947)
++++|.++++ +.+.--..+.. +++|+.|||++|++.........++.++.+.+..| .++..+|.+ ++
T Consensus 26 ~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~---~I~~~aF~~~~~~~~~g~~ 101 (329)
T 3sb4_A 26 SITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMAN---FVPAYAFSNVVNGVTKGKQ 101 (329)
T ss_dssp HCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTT---EECTTTTEEEETTEEEECT
T ss_pred ceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCcccccccccccccccc---ccCHHHhcccccccccccC
Confidence 4666666542 11111112323 66777777777777611101111122344444444 455556666 77
Q ss_pred CCcEEeccCCCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCcc----cCcCCccccC-CC
Q 002255 137 SLQTISLDYNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFL----QGPIPLSFGK-SS 211 (947)
Q Consensus 137 ~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l----~~~~p~~~~~-~~ 211 (947)
+|+.|+|.+ ++.. .-+..|.++++|+.|++.+|.+....+..|. .+.++..+.+..+.. .......|.. .+
T Consensus 102 ~L~~l~L~~-~i~~-I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~--~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~ 177 (329)
T 3sb4_A 102 TLEKVILSE-KIKN-IEDAAFKGCDNLKICQIRKKTAPNLLPEALA--DSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEP 177 (329)
T ss_dssp TCCC-CBCT-TCCE-ECTTTTTTCTTCCEEEBCCSSCCEECTTSSC--TTTCEEEECTTCTHHHHTSTTTTTSCEEESCC
T ss_pred CCcEEECCc-cccc-hhHHHhhcCcccceEEcCCCCccccchhhhc--CCCceEEecCcchhhhhccccccccccccccc
Confidence 777777776 5544 3345566777777777777776655555554 344555555444221 1111111111 11
Q ss_pred Cc-eeeeccCCCCCCCCCchhhhcCCCCCcEEEccCCcCcCCCCCCC-CCCCCCEEEccCCccccCCCccccCCCCCCeE
Q 002255 212 IQ-TLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPLPDLS-GLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVV 289 (947)
Q Consensus 212 L~-~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L 289 (947)
|+ .+.+.... .........-....++..+.+.++-.......+. .+++|+.|+|++|+++...+..|.++++|+.|
T Consensus 178 L~~~i~~~~~~--~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l 255 (329)
T 3sb4_A 178 LETTIQVGAMG--KLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKI 255 (329)
T ss_dssp CEEEEEECTTC--CHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEE
T ss_pred cceeEEecCCC--cHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEE
Confidence 21 11111100 0000000000012334444444331111111111 25677777777777775555567777777777
Q ss_pred eccCCcccccCCCCCCCcccccccCCCCcccCcCCCcCCCccceeeecccccCChhhhhccCCCCCCCCCCCCCcccCCC
Q 002255 290 NLTNNLFQGQTPKFNSPVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAG 369 (947)
Q Consensus 290 ~Ls~N~l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 369 (947)
+|.+| ++...+. .+..+
T Consensus 256 ~l~~n-i~~I~~~--------------------------------------------------------------aF~~~ 272 (329)
T 3sb4_A 256 KLPHN-LKTIGQR--------------------------------------------------------------VFSNC 272 (329)
T ss_dssp ECCTT-CCEECTT--------------------------------------------------------------TTTTC
T ss_pred ECCcc-cceehHH--------------------------------------------------------------HhhCC
Confidence 77766 4322111 11223
Q ss_pred Ccee-EEEecCCCceeeccccccCCccCCeEeccCCcccccCCCcCCCCCCCCccc
Q 002255 370 GNIT-VVNLKNLGLSGTISSNFSRLTSLRQLMLSGNELTGTIPKELTTLPSLEMLD 424 (947)
Q Consensus 370 ~~L~-~L~Ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ 424 (947)
.+|+ .+++.+ +++..-+.+|.+|++|+.|+|++|+++..-+..|.++++|+.++
T Consensus 273 ~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 273 GRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp TTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred hhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 4566 777766 56655567888888888888888888844445788888888775
No 387
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.49 E-value=4.9e-14 Score=154.60 Aligned_cols=257 Identities=14% Similarity=0.110 Sum_probs=176.0
Q ss_pred CCcEEEEEecCCccc--ccCcccccCCCCCCEEEcccCcccCcCC-CCCC--------CCCCcEEecCCCcCCCCCcccc
Q 002255 64 SNRVTRIQIGGQNIE--GTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSG--------LSSLQEVLFDDNNFTSVPSDFF 132 (947)
Q Consensus 64 ~~~v~~l~L~~~~l~--g~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~--------l~~L~~L~L~~n~l~~~~~~~~ 132 (947)
..+++.|||++|++. ...+. .++.+..+.+..|.+ .+ .|.+ +++|+.|+|.+ .++.+...+|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~---~~~~~~~~~~~~~~I---~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF 120 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAG---TYPNGKFYIYMANFV---PAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAF 120 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSS---SSGGGCCEEECTTEE---CTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTT
T ss_pred hccCeEEecCcceeEEecCccc---ccccccccccccccc---CHHHhcccccccccccCCCcEEECCc-cccchhHHHh
Confidence 357999999999988 22222 223355666666632 12 5777 99999999998 8999999999
Q ss_pred cCCCCCcEEeccCCCCCCCCCcccccCCCCCCeEeccCcee----eeccCcccCCCCCCCcc-EEEccCCcccCcCCccc
Q 002255 133 KGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGANI----TGTIPDFLGGDTIPGLM-HLHLAFNFLQGPIPLSF 207 (947)
Q Consensus 133 ~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l----~~~~p~~~~~~~l~~L~-~L~Ls~N~l~~~~p~~~ 207 (947)
.++++|++|+|++|.+.. ..+..|..+.++..+.+..+.. ...-...|. .+..|+ .+.+.... .++..+
T Consensus 121 ~~~~~L~~l~l~~n~i~~-i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~--~~~~L~~~i~~~~~~---~l~~~~ 194 (329)
T 3sb4_A 121 KGCDNLKICQIRKKTAPN-LLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFI--EGEPLETTIQVGAMG---KLEDEI 194 (329)
T ss_dssp TTCTTCCEEEBCCSSCCE-ECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEE--ESCCCEEEEEECTTC---CHHHHH
T ss_pred hcCcccceEEcCCCCccc-cchhhhcCCCceEEecCcchhhhhccccccccccc--cccccceeEEecCCC---cHHHHH
Confidence 999999999999998865 5567788887787777766332 111122222 234454 34443321 122211
Q ss_pred -----cCCCCceeeeccCCCCCCCCCchhhh-cCCCCCcEEEccCCcCcCCCC-CCCCCCCCCEEEccCCccccCCCccc
Q 002255 208 -----GKSSIQTLWLNGQKGDSKLNGSVAVI-QNMTSLTQLWLHGNSFTGPLP-DLSGLSSLQDFSVRDNQLTGIVPSSL 280 (947)
Q Consensus 208 -----~~~~L~~L~l~~n~~~~~~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~g~~p~~l 280 (947)
...++..+.+.++-.. .....+ ..+++|+.|+|++|+++...+ .|.++.+|+.|+|.+| ++..-+..|
T Consensus 195 ~~~~~~~~~~~~l~~~~~l~~----~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF 269 (329)
T 3sb4_A 195 MKAGLQPRDINFLTIEGKLDN----ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVF 269 (329)
T ss_dssp HHTTCCGGGCSEEEEEECCCH----HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTT
T ss_pred hhcccCccccceEEEeeeecH----HHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHh
Confidence 1234556665544111 111111 237899999999999997766 4899999999999998 876777889
Q ss_pred cCCCCCC-eEeccCCcccccCCCCCCCcccccccCCCCcccCcCCCcCCCccceeeecccccCChhhhhccCCCCCCCCC
Q 002255 281 VNLHSLA-VVNLTNNLFQGQTPKFNSPVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNS 359 (947)
Q Consensus 281 ~~l~~L~-~L~Ls~N~l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~ 359 (947)
.++++|+ .|+|.+ .++...+.
T Consensus 270 ~~~~~L~~~l~l~~-~l~~I~~~--------------------------------------------------------- 291 (329)
T 3sb4_A 270 SNCGRLAGTLELPA-SVTAIEFG--------------------------------------------------------- 291 (329)
T ss_dssp TTCTTCCEEEEECT-TCCEECTT---------------------------------------------------------
T ss_pred hCChhccEEEEEcc-cceEEchh---------------------------------------------------------
Confidence 9999999 999988 55432222
Q ss_pred CCCCcccCCCCceeEEEecCCCceeeccccccCCccCCeEec
Q 002255 360 DWKGVSCDAGGNITVVNLKNLGLSGTISSNFSRLTSLRQLML 401 (947)
Q Consensus 360 ~~~~~~~~~~~~L~~L~Ls~n~l~g~ip~~~~~l~~L~~L~L 401 (947)
.+..+.+|+.|+++.|+++..-+..|.++++|+.|+.
T Consensus 292 -----aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 292 -----AFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp -----TTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred -----hhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 1234568999999999999877889999999999974
No 388
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.48 E-value=5.8e-14 Score=138.78 Aligned_cols=43 Identities=23% Similarity=0.304 Sum_probs=36.0
Q ss_pred cccCCccCCeEeccCCcccccCCCc----CCCCCCCCccccccccccc
Q 002255 389 NFSRLTSLRQLMLSGNELTGTIPKE----LTTLPSLEMLDVSNNHLFG 432 (947)
Q Consensus 389 ~~~~l~~L~~L~Ls~N~l~g~iP~~----l~~l~~L~~L~ls~N~l~g 432 (947)
.+..+++|+.|+|++|.++ .+|.. +..+++|++||+++|.+..
T Consensus 108 ~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 108 PLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp GGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred hhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 5777888999999999998 67775 8889999999999988754
No 389
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.45 E-value=5.3e-14 Score=139.05 Aligned_cols=128 Identities=16% Similarity=0.252 Sum_probs=103.2
Q ss_pred CcEEEEEecCCcccccCcccccCCC-CCCEEEcccCcccCcCCCCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEec
Q 002255 65 NRVTRIQIGGQNIEGTLPKELNSLS-SLTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISL 143 (947)
Q Consensus 65 ~~v~~l~L~~~~l~g~~p~~l~~l~-~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (947)
..++.|+|++|+++ .+|. +..+. +|++|+|++|.+++. +.|.++++|++|+|++|+++++++..|..+++|++|+|
T Consensus 19 ~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 95 (176)
T 1a9n_A 19 VRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELIL 95 (176)
T ss_dssp TSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEEC
T ss_pred CCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc-cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEEC
Confidence 36788999999888 4544 55554 899999999998876 78888899999999999999888887788899999999
Q ss_pred cCCCCCCCCCcc--cccCCCCCCeEeccCceeeeccCcc----cCCCCCCCccEEEccCCccc
Q 002255 144 DYNSFDSWVIPE--SLKDATGLQRFSANGANITGTIPDF----LGGDTIPGLMHLHLAFNFLQ 200 (947)
Q Consensus 144 s~N~l~~~~~p~--~~~~l~~L~~L~l~~n~l~~~~p~~----~~~~~l~~L~~L~Ls~N~l~ 200 (947)
++|+|.. +|. .+..+++|+.|++++|.++ .+|.. +. .+++|++||+++|.+.
T Consensus 96 ~~N~i~~--~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~--~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 96 TNNSLVE--LGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIY--KVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CSCCCCC--GGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHH--HCTTCSEETTEECCHH
T ss_pred CCCcCCc--chhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHH--HCCccceeCCCcCCHH
Confidence 9998854 565 7888888999999988887 45553 55 6788888888888875
No 390
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.40 E-value=1.1e-12 Score=129.05 Aligned_cols=104 Identities=20% Similarity=0.338 Sum_probs=84.9
Q ss_pred EEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEeccCC
Q 002255 68 TRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYN 146 (947)
Q Consensus 68 ~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N 146 (947)
+.++++++++. .+|..+. ++|++|+|++|+|++.+| .|.++++|++|+|++|+|+++++..|..+++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 57889999886 7887775 889999999999998877 6889999999999999999999888888999999999999
Q ss_pred CCCCCCCcccccCCCCCCeEeccCceeee
Q 002255 147 SFDSWVIPESLKDATGLQRFSANGANITG 175 (947)
Q Consensus 147 ~l~~~~~p~~~~~l~~L~~L~l~~n~l~~ 175 (947)
+|.. ..+..+..+++|++|+|++|.+..
T Consensus 92 ~l~~-l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 92 HLKS-IPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CCCC-CCTTTTTTCTTCSEEECCSSCBCT
T ss_pred ccce-eCHHHhccccCCCEEEeCCCCccc
Confidence 8875 333446677777777777776653
No 391
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.40 E-value=1.1e-15 Score=154.35 Aligned_cols=160 Identities=21% Similarity=0.301 Sum_probs=95.7
Q ss_pred ccCCCCCCEEEcccCcccCcCCCCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCCcccccCCCCCC
Q 002255 85 LNSLSSLTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQ 164 (947)
Q Consensus 85 l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~ 164 (947)
+.....++.++++.|.++|.+|.+.. ++ ..|..+++|++|+|++|++.. +| .+.++++|+
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~----------------l~-~~~~~l~~L~~L~ls~n~l~~--l~-~~~~l~~L~ 73 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEK----------------MD-ATLSTLKACKHLALSTNNIEK--IS-SLSGMENLR 73 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCC----------------CH-HHHHHTTTCSEEECSEEEESC--CC-CHHHHTTCC
T ss_pred HHhcccccCcchheeEeccccCcHhh----------------hh-HHHhcCCCCCEEECCCCCCcc--cc-ccccCCCCC
Confidence 45556777777777777776653211 11 134455555555555555543 33 455555555
Q ss_pred eEeccCceeeeccCcccCCCCCCCccEEEccCCcccCcCCccccCCCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEc
Q 002255 165 RFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWL 244 (947)
Q Consensus 165 ~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L 244 (947)
+|++++|.++ .+|..+. .+++|++|+|++|++++ +| . +.++++|+.|+|
T Consensus 74 ~L~l~~n~l~-~l~~~~~--~~~~L~~L~L~~N~l~~-l~-~--------------------------~~~l~~L~~L~l 122 (198)
T 1ds9_A 74 ILSLGRNLIK-KIENLDA--VADTLEELWISYNQIAS-LS-G--------------------------IEKLVNLRVLYM 122 (198)
T ss_dssp EEEEEEEEEC-SCSSHHH--HHHHCSEEEEEEEECCC-HH-H--------------------------HHHHHHSSEEEE
T ss_pred EEECCCCCcc-cccchhh--cCCcCCEEECcCCcCCc-CC-c--------------------------cccCCCCCEEEC
Confidence 5555555555 3454443 34566666666666663 22 1 234566777777
Q ss_pred cCCcCcCCCC--CCCCCCCCCEEEccCCccccCCCcc----------ccCCCCCCeEeccCCccc
Q 002255 245 HGNSFTGPLP--DLSGLSSLQDFSVRDNQLTGIVPSS----------LVNLHSLAVVNLTNNLFQ 297 (947)
Q Consensus 245 ~~N~l~~~~~--~~~~l~~L~~L~l~~N~l~g~~p~~----------l~~l~~L~~L~Ls~N~l~ 297 (947)
++|++++..+ .+..+++|++|++++|.+++.+|.. +..+++|+.|| +|.++
T Consensus 123 ~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 123 SNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp SEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred CCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 7777765433 4667777888888888877665543 78888888887 66665
No 392
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.39 E-value=9.8e-13 Score=128.91 Aligned_cols=105 Identities=22% Similarity=0.379 Sum_probs=82.9
Q ss_pred EEEEecCCcccccCcccccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEeccCC
Q 002255 68 TRIQIGGQNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYN 146 (947)
Q Consensus 68 ~~l~L~~~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N 146 (947)
+.|++++++++ .+|..+. ++|++|+|++|+|++.+| .|.++++|++|+|++|+|+++++..|..+++|++|+|++|
T Consensus 12 ~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 35677777887 5777664 789999999999998877 6888999999999999999988888888889999999988
Q ss_pred CCCCCCCcccccCCCCCCeEeccCceeeec
Q 002255 147 SFDSWVIPESLKDATGLQRFSANGANITGT 176 (947)
Q Consensus 147 ~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~ 176 (947)
+|.+ ..+..|.++++|++|+|++|.++..
T Consensus 89 ~l~~-~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 89 QLKS-IPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp CCCC-CCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred ccCE-eCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 8865 3444577777777777777766643
No 393
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.39 E-value=1e-15 Score=154.68 Aligned_cols=133 Identities=22% Similarity=0.286 Sum_probs=101.2
Q ss_pred CcEEEEEecCCcccccCcc------cccCCCCCCEEEcccCcccCcCCCCCCCCCCcEEecCCCcCCCCCcccccCCCCC
Q 002255 65 NRVTRIQIGGQNIEGTLPK------ELNSLSSLTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSL 138 (947)
Q Consensus 65 ~~v~~l~L~~~~l~g~~p~------~l~~l~~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 138 (947)
.+|+.++++++.+.|.+|. .+..+++|++|+|++|.+++ +|.+.++++|++|+|++|+++.++. .+..+++|
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~~~~~l~~L~~L~l~~n~l~~l~~-~~~~~~~L 95 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-ISSLSGMENLRILSLGRNLIKKIEN-LDAVADTL 95 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CCCHHHHTTCCEEEEEEEEECSCSS-HHHHHHHC
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-ccccccCCCCCEEECCCCCcccccc-hhhcCCcC
Confidence 4677888888888888876 89999999999999999987 5588888889999998888887654 46667888
Q ss_pred cEEeccCCCCCCCCCcccccCCCCCCeEeccCceeeeccC-cccCCCCCCCccEEEccCCcccCcCC
Q 002255 139 QTISLDYNSFDSWVIPESLKDATGLQRFSANGANITGTIP-DFLGGDTIPGLMHLHLAFNFLQGPIP 204 (947)
Q Consensus 139 ~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p-~~~~~~~l~~L~~L~Ls~N~l~~~~p 204 (947)
++|+|++|++.+ +| .+..+++|++|++++|++++..+ ..+. .+++|++|+|++|.+++.+|
T Consensus 96 ~~L~L~~N~l~~--l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~--~l~~L~~L~l~~N~l~~~~~ 157 (198)
T 1ds9_A 96 EELWISYNQIAS--LS-GIEKLVNLRVLYMSNNKITNWGEIDKLA--ALDKLEDLLLAGNPLYNDYK 157 (198)
T ss_dssp SEEEEEEEECCC--HH-HHHHHHHSSEEEESEEECCCHHHHHHHT--TTTTCSEEEECSCHHHHHHH
T ss_pred CEEECcCCcCCc--CC-ccccCCCCCEEECCCCcCCchhHHHHHh--cCCCCCEEEecCCccccccc
Confidence 888888888865 44 57777777777777777764322 3444 56777777777777765544
No 394
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.38 E-value=1.8e-11 Score=137.20 Aligned_cols=261 Identities=12% Similarity=0.158 Sum_probs=160.8
Q ss_pred CCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCCcccccCCCCCCeEe
Q 002255 89 SSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFS 167 (947)
Q Consensus 89 ~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~ 167 (947)
..++.+.+.+ .++.... .|.++ +|+.+.|.+| ++.+...+|.+. +|+.+.|.. .+.. .-+..|.++.+|+.++
T Consensus 113 ~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~-I~~~aF~~c~~L~~l~ 186 (401)
T 4fdw_A 113 KGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQ-LKEDIFYYCYNLKKAD 186 (401)
T ss_dssp SSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCE-ECSSTTTTCTTCCEEE
T ss_pred CCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccE-ehHHHhhCcccCCeee
Confidence 5556666554 2443333 46554 5666666655 666666666663 566666664 4433 3345666666777777
Q ss_pred ccCceeeeccCcccCCCCCCCccEEEccCCcccCcCCccccC-CCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccC
Q 002255 168 ANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGK-SSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHG 246 (947)
Q Consensus 168 l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~ 246 (947)
+.+|+++......|. ..+|+.+.|..+ ++..-...|.. .+|+.+.+..+ +..... .+|.+ .+|+.+.|.
T Consensus 187 l~~n~l~~I~~~aF~---~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~---~aF~~-~~L~~i~lp- 256 (401)
T 4fdw_A 187 LSKTKITKLPASTFV---YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQ---EAFRE-SGITTVKLP- 256 (401)
T ss_dssp CTTSCCSEECTTTTT---TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECT---TTTTT-CCCSEEEEE-
T ss_pred cCCCcceEechhhEe---ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCccc---ccccc-CCccEEEeC-
Confidence 766666644444443 356666766633 55344444544 35666666543 222211 22444 678888884
Q ss_pred CcCcCCCC-CCCCCCCCCEEEccCCccc-----cCCCccccCCCCCCeEeccCCcccccCCCCCCCcccccccCCCCccc
Q 002255 247 NSFTGPLP-DLSGLSSLQDFSVRDNQLT-----GIVPSSLVNLHSLAVVNLTNNLFQGQTPKFNSPVRFDMAKGSNSFCL 320 (947)
Q Consensus 247 N~l~~~~~-~~~~l~~L~~L~l~~N~l~-----g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~~~~~~~~ 320 (947)
|.++.... .|.++++|+.+++.+|.+. ...+..|.++++|+.++|.++ ++.....
T Consensus 257 ~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~~-i~~I~~~------------------ 317 (401)
T 4fdw_A 257 NGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPES-IRILGQG------------------ 317 (401)
T ss_dssp TTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCTT-CCEECTT------------------
T ss_pred CCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCCc-eEEEhhh------------------
Confidence 45554444 4788888888888887765 345677888888998888743 4421111
Q ss_pred CcCCCcCCCccceeeecccccCChhhhhccCCCCCCCCCCCCCcccCCCCceeEEEecCCCceeeccccccCCccCCeEe
Q 002255 321 DDAGVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLSGTISSNFSRLTSLRQLM 400 (947)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g~ip~~~~~l~~L~~L~ 400 (947)
.+..+.+|+.+.|..| ++..-+.+|.++ +|+.|+
T Consensus 318 --------------------------------------------aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~ 351 (401)
T 4fdw_A 318 --------------------------------------------LLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVK 351 (401)
T ss_dssp --------------------------------------------TTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEE
T ss_pred --------------------------------------------hhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEE
Confidence 1123346788888554 665556788999 999999
Q ss_pred ccCCcccccCCCcCCCCC-CCCccccccccc
Q 002255 401 LSGNELTGTIPKELTTLP-SLEMLDVSNNHL 430 (947)
Q Consensus 401 Ls~N~l~g~iP~~l~~l~-~L~~L~ls~N~l 430 (947)
|++|.+.-..+..|..++ ++..|++..|.+
T Consensus 352 l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 352 VEGTTPPQVFEKVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp ECCSSCCBCCCSSCCCSCTTCCEEEECGGGH
T ss_pred EcCCCCcccccccccCCCCCccEEEeCHHHH
Confidence 999998854456677774 678888877765
No 395
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.37 E-value=2.1e-12 Score=126.58 Aligned_cols=109 Identities=20% Similarity=0.256 Sum_probs=95.9
Q ss_pred CCCEEEcccCcccCcCCCCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCCcccccCCCCCCeEecc
Q 002255 90 SLTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSAN 169 (947)
Q Consensus 90 ~L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~ 169 (947)
..+.|++++|+|+..+..+. ++|++|+|++|+|+++++..|..+++|++|+|++|+|.. ..+..|..+++|++|+|+
T Consensus 10 ~~~~l~~s~n~l~~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLASVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTV-LPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCC-CCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcCccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCc-cChhhccCCCCCCEEECC
Confidence 35789999999997655553 889999999999999999999999999999999999986 555668999999999999
Q ss_pred CceeeeccCcccCCCCCCCccEEEccCCcccCcC
Q 002255 170 GANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPI 203 (947)
Q Consensus 170 ~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~ 203 (947)
+|+|++..+..|. .+++|++|+|++|.++...
T Consensus 87 ~N~l~~~~~~~~~--~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 87 DNQLKSIPRGAFD--NLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp SSCCCCCCTTTTT--TCTTCCEEECCSSCBCTTB
T ss_pred CCccCEeCHHHhc--CCCCCCEEEeCCCCCCCCc
Confidence 9999987777777 6899999999999998554
No 396
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.34 E-value=4.6e-12 Score=124.51 Aligned_cols=107 Identities=16% Similarity=0.253 Sum_probs=93.0
Q ss_pred CCEEEcccCcccCcCCCCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCCcccccCCCCCCeEeccC
Q 002255 91 LTVLEVMKNKLTGQIPSLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANG 170 (947)
Q Consensus 91 L~~L~L~~N~l~~~~p~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~ 170 (947)
-+.+++++|+++..++.+. ++|++|+|++|+|+++++..|..+++|++|+|++|+|.+ ..+..|.++++|++|+|++
T Consensus 14 ~~~l~~~~n~l~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTA-IPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCCccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCc-cChhHhCCcchhhEEECCC
Confidence 3789999999976555554 899999999999999999999999999999999999976 3445578999999999999
Q ss_pred ceeeeccCcccCCCCCCCccEEEccCCcccCc
Q 002255 171 ANITGTIPDFLGGDTIPGLMHLHLAFNFLQGP 202 (947)
Q Consensus 171 n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~ 202 (947)
|+|++..+..|. .+++|++|+|++|.+...
T Consensus 91 N~l~~l~~~~~~--~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 91 NHLKSIPRGAFD--NLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp SCCCCCCTTTTT--TCTTCSEEECCSSCBCTT
T ss_pred CccceeCHHHhc--cccCCCEEEeCCCCcccc
Confidence 999976666676 689999999999999843
No 397
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.25 E-value=1.1e-11 Score=137.06 Aligned_cols=106 Identities=20% Similarity=0.328 Sum_probs=79.4
Q ss_pred CCCceeEeCCCCcEEEEEecCC-cccccCcccccCCCCCCEEEccc-CcccCcCC-CCCCCCCCcEEecCCCcCCCCCcc
Q 002255 54 CKWKHIQCSPSNRVTRIQIGGQ-NIEGTLPKELNSLSSLTVLEVMK-NKLTGQIP-SLSGLSSLQEVLFDDNNFTSVPSD 130 (947)
Q Consensus 54 C~w~gv~C~~~~~v~~l~L~~~-~l~g~~p~~l~~l~~L~~L~L~~-N~l~~~~p-~~~~l~~L~~L~L~~n~l~~~~~~ 130 (947)
|.|.+|.|+ ++ +|+ .+|. |..+++|+.|+|++ |+|++.++ .|.+|++|++|+|++|+|+++++.
T Consensus 8 C~~~~v~~~-----------~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 74 (347)
T 2ifg_A 8 HGSSGLRCT-----------RDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPD 74 (347)
T ss_dssp SSSSCEECC-----------SSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTT
T ss_pred ccCCEEEcC-----------CCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHH
Confidence 777666664 44 566 5888 99999999999996 99998887 688999999999999999999988
Q ss_pred cccCCCCCcEEeccCCCCCCCCCcccccCCCCCCeEeccCceee
Q 002255 131 FFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGANIT 174 (947)
Q Consensus 131 ~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~ 174 (947)
.|.+|++|++|+|++|+|.+ ..+..+..+. |+.|+|.+|.+.
T Consensus 75 ~~~~l~~L~~L~l~~N~l~~-~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 75 AFHFTPRLSRLNLSFNALES-LSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp GGGSCSCCCEEECCSSCCSC-CCSTTTCSCC-CCEEECCSSCCC
T ss_pred HhcCCcCCCEEeCCCCccce-eCHHHcccCC-ceEEEeeCCCcc
Confidence 88889999999999998864 2222333332 555555555443
No 398
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.24 E-value=2.6e-11 Score=128.23 Aligned_cols=147 Identities=16% Similarity=0.090 Sum_probs=114.6
Q ss_pred HHHHhcCCCcCceecccCceEEEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHHHHcCC-CCCcceEEEEEEeCCee
Q 002255 585 LRNVTNNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVR-HRHLVGLLGYCLDGNER 663 (947)
Q Consensus 585 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~ 663 (947)
+....+.|+....++.|+.+.||++... ++.+++|+...... .....+.+|+++++.+. +..+.++++++...+..
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~--~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~ 85 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYK--GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWS 85 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGT--TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEE
T ss_pred HHHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccC--CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCce
Confidence 3455577988889999999999999755 78999999865321 11235888999999995 67788999999999999
Q ss_pred EEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhcc------------------------------
Q 002255 664 LLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLA------------------------------ 713 (947)
Q Consensus 664 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~------------------------------ 713 (947)
|+||||++|.+|.+.+.. ......++.+++++++.||+..
T Consensus 86 ~lv~e~i~G~~l~~~~~~----------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (263)
T 3tm0_A 86 NLLMSEADGVLCSEEYED----------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDC 155 (263)
T ss_dssp EEEEECCSSEEHHHHCCT----------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSG
T ss_pred EEEEEecCCeehhhccCC----------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccc
Confidence 999999999999775311 1123467889999999999721
Q ss_pred --------------------------CCCeeecCCCCCcEEEcCCCcEEEeecCcce
Q 002255 714 --------------------------HQSFIHRDLKPSNILLGDDMRAKVADFGLVR 744 (947)
Q Consensus 714 --------------------------~~~ivHrDlkp~Nill~~~~~~kl~DfGla~ 744 (947)
...++|+|++|.||+++++..+.|+||+.+.
T Consensus 156 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 156 ENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp GGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred ccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1458999999999999876667799998654
No 399
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.20 E-value=8.8e-10 Score=123.38 Aligned_cols=247 Identities=12% Similarity=0.113 Sum_probs=184.7
Q ss_pred CCCCCcEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCc
Q 002255 110 GLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGL 189 (947)
Q Consensus 110 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L 189 (947)
.+..++.+.+.+ .++.+...+|.+. +|+.++|..| +.. .-...|.+ .+|+.+.+.+ .++..-+..|. .+++|
T Consensus 111 ~~~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~-I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~--~c~~L 182 (401)
T 4fdw_A 111 ILKGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKS-IGDMAFFN-STVQEIVFPS-TLEQLKEDIFY--YCYNL 182 (401)
T ss_dssp ECSSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCE-ECTTTTTT-CCCCEEECCT-TCCEECSSTTT--TCTTC
T ss_pred ecCCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccE-ECHHhcCC-CCceEEEeCC-CccEehHHHhh--CcccC
Confidence 357788888874 6888999999985 8999999877 544 34456666 4799999986 66655666776 68999
Q ss_pred cEEEccCCcccCcCCccccCCCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccCCcCcCCCC-CCCCCCCCCEEEcc
Q 002255 190 MHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPLP-DLSGLSSLQDFSVR 268 (947)
Q Consensus 190 ~~L~Ls~N~l~~~~p~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~l~ 268 (947)
+.++|++|+++......|..++|+.+.|..+ +..... ..|.++++|+.++|..| ++.... .|.+ .+|+.+.+
T Consensus 183 ~~l~l~~n~l~~I~~~aF~~~~L~~l~lp~~-l~~I~~---~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l- 255 (401)
T 4fdw_A 183 KKADLSKTKITKLPASTFVYAGIEEVLLPVT-LKEIGS---QAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL- 255 (401)
T ss_dssp CEEECTTSCCSEECTTTTTTCCCSEEECCTT-CCEECT---TTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-
T ss_pred CeeecCCCcceEechhhEeecccCEEEeCCc-hheehh---hHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-
Confidence 9999999999966666777788999999744 333322 35778999999999975 554444 3666 78999999
Q ss_pred CCccccCCCccccCCCCCCeEeccCCcccccCCCCCCCcccccccCCCCcccCcCCCcCCCccceeeecccccCChhhhh
Q 002255 269 DNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQTPKFNSPVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVLA 348 (947)
Q Consensus 269 ~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~ 348 (947)
.|.++..-...|.++++|+.+++.+|.+.......
T Consensus 256 p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~--------------------------------------------- 290 (401)
T 4fdw_A 256 PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAM--------------------------------------------- 290 (401)
T ss_dssp ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCE---------------------------------------------
T ss_pred CCCccEEChhHhhCCCCCCEEEeCCccccCCcccE---------------------------------------------
Confidence 56677566888999999999999998775110000
Q ss_pred ccCCCCCCCCCCCCCcccCCCCceeEEEecCCCceeeccccccCCccCCeEeccCCcccccCCCcCCCCCCCCccccccc
Q 002255 349 ESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLSGTISSNFSRLTSLRQLMLSGNELTGTIPKELTTLPSLEMLDVSNN 428 (947)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ls~N 428 (947)
...-.+..+.+|+.+.|. +.++-.-...|.+|++|+.|+|..| ++..-+.+|..+ +|+.+++++|
T Consensus 291 ------------I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n 355 (401)
T 4fdw_A 291 ------------IHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGT 355 (401)
T ss_dssp ------------ECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCS
T ss_pred ------------ECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCC
Confidence 000122345578999998 4577566678999999999999665 773445789999 9999999999
Q ss_pred ccc
Q 002255 429 HLF 431 (947)
Q Consensus 429 ~l~ 431 (947)
.+.
T Consensus 356 ~~~ 358 (401)
T 4fdw_A 356 TPP 358 (401)
T ss_dssp SCC
T ss_pred CCc
Confidence 764
No 400
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.13 E-value=1e-10 Score=129.24 Aligned_cols=105 Identities=17% Similarity=0.240 Sum_probs=89.2
Q ss_pred CEEEcccC-cccCcCCCCCCCCCCcEEecCC-CcCCCCCcccccCCCCCcEEeccCCCCCCCCCcccccCCCCCCeEecc
Q 002255 92 TVLEVMKN-KLTGQIPSLSGLSSLQEVLFDD-NNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSAN 169 (947)
Q Consensus 92 ~~L~L~~N-~l~~~~p~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~ 169 (947)
..++++++ +|++.++ +..+++|++|+|++ |+|+++++..|.+|++|++|+|++|+|.+ ..|..|.+|++|++|+|+
T Consensus 11 ~~v~~~~~n~l~~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALDSLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRF-VAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCTTTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCE-ECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCCccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccce-eCHHHhcCCcCCCEEeCC
Confidence 35688887 8987666 99999999999996 99999999999999999999999999976 677788999999999999
Q ss_pred CceeeeccCcccCCCCCCCccEEEccCCcccC
Q 002255 170 GANITGTIPDFLGGDTIPGLMHLHLAFNFLQG 201 (947)
Q Consensus 170 ~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~ 201 (947)
+|+|++..+..+. .++ |+.|+|.+|.|..
T Consensus 89 ~N~l~~~~~~~~~--~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 89 FNALESLSWKTVQ--GLS-LQELVLSGNPLHC 117 (347)
T ss_dssp SSCCSCCCSTTTC--SCC-CCEEECCSSCCCC
T ss_pred CCccceeCHHHcc--cCC-ceEEEeeCCCccC
Confidence 9999876666654 344 9999999998873
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.13 E-value=8.9e-13 Score=146.28 Aligned_cols=66 Identities=21% Similarity=0.177 Sum_probs=44.3
Q ss_pred hcCCCCCcEEEccCCcCcCCC----C-CCCCCCCCCEEEccCCccccC----CCccccCCCCCCeEeccCCcccc
Q 002255 233 IQNMTSLTQLWLHGNSFTGPL----P-DLSGLSSLQDFSVRDNQLTGI----VPSSLVNLHSLAVVNLTNNLFQG 298 (947)
Q Consensus 233 ~~~l~~L~~L~L~~N~l~~~~----~-~~~~l~~L~~L~l~~N~l~g~----~p~~l~~l~~L~~L~Ls~N~l~g 298 (947)
+..+++|++|+|++|.|+... . .+...++|+.|+|++|.|+.. ++..+...++|++|+|++|.|+.
T Consensus 179 L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 179 LAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp HHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCH
T ss_pred HhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCH
Confidence 344667777777777776432 1 245566788888888887642 44555667888888888888764
No 402
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.10 E-value=9.1e-11 Score=123.86 Aligned_cols=136 Identities=17% Similarity=0.135 Sum_probs=100.1
Q ss_pred CCCcCceecccCceEEEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCC--cceEEEEEEeCCeeEEEEE
Q 002255 591 NFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRH--LVGLLGYCLDGNERLLVYE 668 (947)
Q Consensus 591 ~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~lV~e 668 (947)
.|.+..+.+.|..+.||++...+|+.+++|+.... ....+.+|+.+++.+.+.+ +.+++++...++..++|||
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~-----~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e 95 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG-----ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLG 95 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC-----TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEE
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc-----cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEE
Confidence 34443333456669999998777888999987543 1245778999999996545 4568888888888999999
Q ss_pred ecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhcc-----------------------------------
Q 002255 669 YMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLA----------------------------------- 713 (947)
Q Consensus 669 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~----------------------------------- 713 (947)
|++|.++. ... .. ...++.++++.|+.||+..
T Consensus 96 ~i~G~~l~--~~~--------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (264)
T 1nd4_A 96 EVPGQDLL--SSH--------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEH 162 (264)
T ss_dssp CCSSEETT--TSC--------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGG
T ss_pred ecCCcccC--cCc--------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhc
Confidence 99998884 211 11 1256778888888888632
Q ss_pred --------------------CCCeeecCCCCCcEEEcCCCcEEEeecCcce
Q 002255 714 --------------------HQSFIHRDLKPSNILLGDDMRAKVADFGLVR 744 (947)
Q Consensus 714 --------------------~~~ivHrDlkp~Nill~~~~~~kl~DfGla~ 744 (947)
...++|+|++|.||++++++.+.|+|||.+.
T Consensus 163 ~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 163 QGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp TTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred cCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1239999999999999887667799999765
No 403
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.06 E-value=2.1e-12 Score=143.30 Aligned_cols=185 Identities=15% Similarity=0.168 Sum_probs=94.8
Q ss_pred cEEEEEecCCcccccCcccccCC-----CCCCEEEcccCcccCcCC-C-CCCCCCCcEEecCCCcCCCCCcccc-----c
Q 002255 66 RVTRIQIGGQNIEGTLPKELNSL-----SSLTVLEVMKNKLTGQIP-S-LSGLSSLQEVLFDDNNFTSVPSDFF-----K 133 (947)
Q Consensus 66 ~v~~l~L~~~~l~g~~p~~l~~l-----~~L~~L~L~~N~l~~~~p-~-~~~l~~L~~L~L~~n~l~~~~~~~~-----~ 133 (947)
.++.|+|++|.++..-...|..+ ++|+.|+|++|.++.... . ...+++|++|+|++|.|+......+ .
T Consensus 73 ~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~ 152 (372)
T 3un9_A 73 SLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLH 152 (372)
T ss_dssp TCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHS
T ss_pred hCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHh
Confidence 46666666666654333332222 566666666666654221 2 2234566666666666654333322 2
Q ss_pred CCCCCcEEeccCCCCCCC---CCcccccCCCCCCeEeccCceeeec----cCcccCCCCCCCccEEEccCCcccCcCCcc
Q 002255 134 GLTSLQTISLDYNSFDSW---VIPESLKDATGLQRFSANGANITGT----IPDFLGGDTIPGLMHLHLAFNFLQGPIPLS 206 (947)
Q Consensus 134 ~l~~L~~L~Ls~N~l~~~---~~p~~~~~l~~L~~L~l~~n~l~~~----~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 206 (947)
..++|++|+|++|.|... .++..+..+++|++|+|++|.|+.. ++..+. ..++|++|+|++|.|+......
T Consensus 153 ~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~--~~~~L~~L~Ls~N~i~~~g~~~ 230 (372)
T 3un9_A 153 DQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLD--RNRQLQELNVAYNGAGDTAALA 230 (372)
T ss_dssp TTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGG--GCSCCCEEECCSSCCCHHHHHH
T ss_pred cCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHh--cCCCcCeEECCCCCCCHHHHHH
Confidence 345666666666665320 1233445556666666666665532 123333 3345666666666655322111
Q ss_pred ccCCCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccCCcCcCCCC----CCCCCC--CCCEEE--ccCCcccc
Q 002255 207 FGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPLP----DLSGLS--SLQDFS--VRDNQLTG 274 (947)
Q Consensus 207 ~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~----~~~~l~--~L~~L~--l~~N~l~g 274 (947)
+ ...+...++|++|+|++|.|+.... .+.... .|+.+. +..|.+..
T Consensus 231 l----------------------~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~~~~~~~~L~~l~~ll~~~~~~~ 284 (372)
T 3un9_A 231 L----------------------ARAAREHPSLELLHLYFNELSSEGRQVLRDLGGAAEGGARVVVSLTEGTAVSE 284 (372)
T ss_dssp H----------------------HHHHHHCSSCCEEECTTSSCCHHHHHHHHHCC------CEEECCCC----CHH
T ss_pred H----------------------HHHHHhCCCCCEEeccCCCCCHHHHHHHHHHhcCCCccchhhHhhhcCCccCH
Confidence 1 1234457889999999999876433 122222 277777 77777753
No 404
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.94 E-value=2.7e-09 Score=118.26 Aligned_cols=144 Identities=15% Similarity=0.227 Sum_probs=107.3
Q ss_pred cCceecccCceEEEEEEEcCCcEEEEEEec--ccccChHHHHHHHHHHHHHHcCC--CCCcceEEEEEEeC---CeeEEE
Q 002255 594 EENVLGRGGFGTVYKGELHDGTKIAVKRME--SAVVSEKGFAEFKSEIAVLTKVR--HRHLVGLLGYCLDG---NERLLV 666 (947)
Q Consensus 594 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~--~~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~---~~~~lV 666 (947)
..+.++.|.++.||+.... +..+++|+.. .... ......+.+|+.+++.+. +..+.++++++.+. +..++|
T Consensus 42 ~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~-~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~v 119 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKL-LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYI 119 (359)
T ss_dssp EEEECCC-CCSCEEEEECS-SCEEEEECCCC-----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEE
T ss_pred eEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCC-CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEE
Confidence 4578999999999999876 4688888765 3221 122357788999999997 45678899888776 458999
Q ss_pred EEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhcc---------------------------------
Q 002255 667 YEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLA--------------------------------- 713 (947)
Q Consensus 667 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~--------------------------------- 713 (947)
|||++|..+.+.. ...++..++..++.++++.|+.||+..
T Consensus 120 me~v~G~~l~~~~-------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (359)
T 3dxp_A 120 MEFVSGRVLWDQS-------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETE 192 (359)
T ss_dssp EECCCCBCCCCTT-------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCS
T ss_pred EEecCCeecCCCc-------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCc
Confidence 9999988774421 123567778889999999999999731
Q ss_pred ----------------------CCCeeecCCCCCcEEEcCCCc--EEEeecCcceec
Q 002255 714 ----------------------HQSFIHRDLKPSNILLGDDMR--AKVADFGLVRLA 746 (947)
Q Consensus 714 ----------------------~~~ivHrDlkp~Nill~~~~~--~kl~DfGla~~~ 746 (947)
...++|+|+++.||+++.++. +.|+||+.+..-
T Consensus 193 ~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 193 SIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp CCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred CChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 257999999999999997753 689999988753
No 405
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.94 E-value=3.8e-08 Score=110.46 Aligned_cols=289 Identities=15% Similarity=0.103 Sum_probs=157.1
Q ss_pred ccccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEeccCCCC------------C
Q 002255 83 KELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSF------------D 149 (947)
Q Consensus 83 ~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l------------~ 149 (947)
.+|.++++|+.+.|..+ ++.... +|.++++|+.++|.++ ++.+...+|.++.+|+.+.+..+-- .
T Consensus 65 ~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~l~~i~~~aF~~~~~~ 142 (394)
T 4fs7_A 65 AAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLMLKSIGVEAFKGCDFK 142 (394)
T ss_dssp TTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTTCCEECTTTTTTCCCS
T ss_pred HHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCceeeecceeeeccccc
Confidence 34666666666666533 443333 5666666666666543 5555555666666665555433210 0
Q ss_pred C--------CCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCcccCcCCccccC-CCCceeeeccC
Q 002255 150 S--------WVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGK-SSIQTLWLNGQ 220 (947)
Q Consensus 150 ~--------~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~l~~n 220 (947)
. ..-...|.++++|+.+.+.++-.+ .-...|. .+.+|+.+++..| ++......|.. ..|+.+.+..+
T Consensus 143 ~~~~~~~~~~i~~~aF~~c~~L~~i~l~~~~~~-I~~~~F~--~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~ 218 (394)
T 4fs7_A 143 EITIPEGVTVIGDEAFATCESLEYVSLPDSMET-LHNGLFS--GCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNS 218 (394)
T ss_dssp EEECCTTCCEECTTTTTTCTTCCEEECCTTCCE-ECTTTTT--TCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTT
T ss_pred ccccCccccccchhhhcccCCCcEEecCCccce-ecccccc--CCCCceEEEcCCC-ceEeCchhhccccccceeecCCC
Confidence 0 012346778888888888765432 3334444 5678888888766 44233334433 45666655443
Q ss_pred CCCCCCCCchhhhcCCCCCcEEEccCCcCcCCCC-CCCCCCCCCEEEccCCccccCCCccccCCCCCCeEeccCCccccc
Q 002255 221 KGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGPLP-DLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQ 299 (947)
Q Consensus 221 ~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ 299 (947)
...- -.......+|+.+.+..+. +.... .+.++..|+.+.+..+... .....+..+..|+.+.+..+.+...
T Consensus 219 ~~~i-----~~~~~~~~~l~~i~ip~~~-~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~~~ 291 (394)
T 4fs7_A 219 LYYL-----GDFALSKTGVKNIIIPDSF-TELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVPEK 291 (394)
T ss_dssp CCEE-----CTTTTTTCCCCEEEECTTC-CEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEECTT
T ss_pred ceEe-----ehhhcccCCCceEEECCCc-eecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeeccc
Confidence 2110 0112234567777775432 22222 3666777888887776554 5556677777777777665543211
Q ss_pred CCCCCCCcccccccCCCCcccCcCCCcCCCccceeeecccccCChhhhhccCCCCCCCCCCCCCcccCCCCceeEEEecC
Q 002255 300 TPKFNSPVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKN 379 (947)
Q Consensus 300 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~ 379 (947)
. +. ...++..+ ..+..+. ....-.+..+.+|+.++|.+
T Consensus 292 ~---F~-------~~~~L~~i---------------~l~~~i~-----------------~I~~~aF~~c~~L~~i~lp~ 329 (394)
T 4fs7_A 292 T---FY-------GCSSLTEV---------------KLLDSVK-----------------FIGEEAFESCTSLVSIDLPY 329 (394)
T ss_dssp T---TT-------TCTTCCEE---------------EECTTCC-----------------EECTTTTTTCTTCCEECCCT
T ss_pred c---cc-------cccccccc---------------ccccccc-----------------eechhhhcCCCCCCEEEeCC
Confidence 0 00 00000000 0000000 00001223345788888865
Q ss_pred CCceeeccccccCCccCCeEeccCCcccccCCCcCCCCCCCCccccccc
Q 002255 380 LGLSGTISSNFSRLTSLRQLMLSGNELTGTIPKELTTLPSLEMLDVSNN 428 (947)
Q Consensus 380 n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ls~N 428 (947)
+ ++..-..+|.++++|+.++|..| ++-.-..+|.++.+|+.++|..|
T Consensus 330 ~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 330 L-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp T-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred c-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 4 65444678889999999999877 66233467888999999988654
No 406
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.83 E-value=2.1e-09 Score=116.05 Aligned_cols=188 Identities=16% Similarity=0.205 Sum_probs=122.3
Q ss_pred CceecccCceEEEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHHHHcCC-CCC--cceEEEEEEeCC---eeEEEEE
Q 002255 595 ENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVR-HRH--LVGLLGYCLDGN---ERLLVYE 668 (947)
Q Consensus 595 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~l~~~~~~~~---~~~lV~e 668 (947)
.+.++.|.+..||+.. +.+++|+-.. ......+.+|+++++.+. +.. +.+++.....++ ..|+|||
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~----~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~ 96 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKH----SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFT 96 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESS----HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCC----cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEc
Confidence 4678999999999863 5688987542 234567899999999884 333 334554443333 3489999
Q ss_pred ecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhcc-----------------------------------
Q 002255 669 YMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLA----------------------------------- 713 (947)
Q Consensus 669 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~----------------------------------- 713 (947)
+++|.++.+... ..++..++..++.++++.++.||+..
T Consensus 97 ~i~G~~l~~~~~-------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (304)
T 3sg8_A 97 KIKGVPLTPLLL-------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQ 169 (304)
T ss_dssp CCCCEECCHHHH-------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHH
T ss_pred ccCCeECCcccc-------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCccc
Confidence 999988865332 12556667778888888888888511
Q ss_pred --------------------CCCeeecCCCCCcEEEcC--CCcEEEeecCcceecCCCCCcceeec------------cc
Q 002255 714 --------------------HQSFIHRDLKPSNILLGD--DMRAKVADFGLVRLAPDNGKHSIETR------------LA 759 (947)
Q Consensus 714 --------------------~~~ivHrDlkp~Nill~~--~~~~kl~DfGla~~~~~~~~~~~~~~------------~~ 759 (947)
...++|+|++|.||++++ ...+.|+||+.+.............. +.
T Consensus 170 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l 249 (304)
T 3sg8_A 170 MKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKIL 249 (304)
T ss_dssp HHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHH
Confidence 135899999999999998 45688999998875433111000000 00
Q ss_pred ccccccC-ccccccCCcCcccccccHHHHHHHHHhCCCCCC
Q 002255 760 GTFGYLA-PEYAVTGRVTTKVDVFSFGVILMELITGRKALD 799 (947)
Q Consensus 760 gt~~y~a-PE~~~~~~~~~~~DvwSlGvil~elltg~~p~~ 799 (947)
...++.. |+... ......+.|+++.++|++.+|+.+|.
T Consensus 250 ~~Y~~~~~~~~~~--r~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 250 NHYKHKDIPTVLE--KYRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp HHHTCSCHHHHHH--HHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHcCCCCcHHHHH--HHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 0001111 22211 11223689999999999999987763
No 407
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.81 E-value=4.3e-10 Score=123.48 Aligned_cols=82 Identities=13% Similarity=0.158 Sum_probs=43.5
Q ss_pred CCcEEEEEecCCcccc-cC-------cccccCCCCCCEEEcccCcccC---------cCC-CCCCCCCCcEEecCCCcCC
Q 002255 64 SNRVTRIQIGGQNIEG-TL-------PKELNSLSSLTVLEVMKNKLTG---------QIP-SLSGLSSLQEVLFDDNNFT 125 (947)
Q Consensus 64 ~~~v~~l~L~~~~l~g-~~-------p~~l~~l~~L~~L~L~~N~l~~---------~~p-~~~~l~~L~~L~L~~n~l~ 125 (947)
..+|+.|.+...+..| .. ..++..+++|+.|.+.++.... .+. .+..+++|+.|.|++|.-.
T Consensus 106 ~~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l 185 (362)
T 2ra8_A 106 LPSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL 185 (362)
T ss_dssp GGGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC
T ss_pred chhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc
Confidence 3478888888666553 22 3345567888888887653311 111 2344556666666555211
Q ss_pred CCCcccccCCCCCcEEeccCCCC
Q 002255 126 SVPSDFFKGLTSLQTISLDYNSF 148 (947)
Q Consensus 126 ~~~~~~~~~l~~L~~L~Ls~N~l 148 (947)
.+++ +. +++|++|+|..|.+
T Consensus 186 ~l~~--~~-~~~L~~L~L~~~~l 205 (362)
T 2ra8_A 186 SIGK--KP-RPNLKSLEIISGGL 205 (362)
T ss_dssp BCCS--CB-CTTCSEEEEECSBC
T ss_pred eecc--cc-CCCCcEEEEecCCC
Confidence 2221 22 55556665555544
No 408
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.73 E-value=3.9e-07 Score=102.10 Aligned_cols=271 Identities=12% Similarity=0.022 Sum_probs=172.5
Q ss_pred ccCcCC-CCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEeccCCCCCCCCCcccccCCCCCCeEeccCcee------
Q 002255 101 LTGQIP-SLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESLKDATGLQRFSANGANI------ 173 (947)
Q Consensus 101 l~~~~p-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~l~~n~l------ 173 (947)
++.... +|.++++|+.+.|.. .++.+...+|.++++|+.++|..+ +.. .-...|.++.+|+.+.+..+-.
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~-I~~~aF~~c~~L~~i~~p~~l~~i~~~a 135 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKM-IGRCTFSGCYALKSILLPLMLKSIGVEA 135 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCE-ECTTTTTTCTTCCCCCCCTTCCEECTTT
T ss_pred EeEhHHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceE-ccchhhcccccchhhcccCceeeeccee
Confidence 443333 799999999999975 599999999999999999999865 433 3345677788888776654311
Q ss_pred ---------------eeccCcccCCCCCCCccEEEccCCcccCcCCccccC-CCCceeeeccCCCCCCCCCchhhhcCCC
Q 002255 174 ---------------TGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGK-SSIQTLWLNGQKGDSKLNGSVAVIQNMT 237 (947)
Q Consensus 174 ---------------~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~l~~n~~~~~~~~~~~~~~~l~ 237 (947)
...-...|. .+++|+.+.|.++..+ .....|.. .+|+.+.+..+ +.... ...+.++.
T Consensus 136 F~~~~~~~~~~~~~~~~i~~~aF~--~c~~L~~i~l~~~~~~-I~~~~F~~c~~L~~i~l~~~-~~~I~---~~~F~~~~ 208 (394)
T 4fs7_A 136 FKGCDFKEITIPEGVTVIGDEAFA--TCESLEYVSLPDSMET-LHNGLFSGCGKLKSIKLPRN-LKIIR---DYCFAECI 208 (394)
T ss_dssp TTTCCCSEEECCTTCCEECTTTTT--TCTTCCEEECCTTCCE-ECTTTTTTCTTCCBCCCCTT-CCEEC---TTTTTTCT
T ss_pred eecccccccccCccccccchhhhc--ccCCCcEEecCCccce-eccccccCCCCceEEEcCCC-ceEeC---chhhcccc
Confidence 001122333 5788999999866432 33445544 67888888755 22211 23466788
Q ss_pred CCcEEEccCCcCcCCCCCCCCCCCCCEEEccCCccccCCCccccCCCCCCeEeccCCcccccCCCCCCCcccccccCCCC
Q 002255 238 SLTQLWLHGNSFTGPLPDLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQTPKFNSPVRFDMAKGSNS 317 (947)
Q Consensus 238 ~L~~L~L~~N~l~~~~~~~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~~~~~ 317 (947)
.|+.+.+..+... .........+|+.+.+..+. +..-...+..+..|+.+.+..|..+= ....+... ...
T Consensus 209 ~L~~i~~~~~~~~-i~~~~~~~~~l~~i~ip~~~-~~i~~~~f~~~~~l~~~~~~~~~~~i-~~~~F~~~-------~~l 278 (394)
T 4fs7_A 209 LLENMEFPNSLYY-LGDFALSKTGVKNIIIPDSF-TELGKSVFYGCTDLESISIQNNKLRI-GGSLFYNC-------SGL 278 (394)
T ss_dssp TCCBCCCCTTCCE-ECTTTTTTCCCCEEEECTTC-CEECSSTTTTCSSCCEEEECCTTCEE-CSCTTTTC-------TTC
T ss_pred ccceeecCCCceE-eehhhcccCCCceEEECCCc-eecccccccccccceeEEcCCCccee-eccccccc-------ccc
Confidence 8888888776543 22234446789999887553 33455678889999999998775431 11110000 000
Q ss_pred cccCcCCCcCCCccceeeecccccCChhhhhccCCCCCCCCCCCCCcccCCCCceeEEEecCCCceeeccccccCCccCC
Q 002255 318 FCLDDAGVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGLSGTISSNFSRLTSLR 397 (947)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~g~ip~~~~~l~~L~ 397 (947)
.... .... ......+....+|+.+.+..+ ++..-..+|.++++|+
T Consensus 279 ~~~~----------------~~~~------------------~i~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~ 323 (394)
T 4fs7_A 279 KKVI----------------YGSV------------------IVPEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLV 323 (394)
T ss_dssp CEEE----------------ECSS------------------EECTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCC
T ss_pred ceec----------------cCce------------------eeccccccccccccccccccc-cceechhhhcCCCCCC
Confidence 0000 0000 000112334567888888765 6645567899999999
Q ss_pred eEeccCCcccccC-CCcCCCCCCCCccccccc
Q 002255 398 QLMLSGNELTGTI-PKELTTLPSLEMLDVSNN 428 (947)
Q Consensus 398 ~L~Ls~N~l~g~i-P~~l~~l~~L~~L~ls~N 428 (947)
.++|..+ ++ .| ..+|.++.+|+.+++..|
T Consensus 324 ~i~lp~~-v~-~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 324 SIDLPYL-VE-EIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp EECCCTT-CC-EECTTTTTTCTTCCEECCCTT
T ss_pred EEEeCCc-cc-EEhHHhccCCCCCCEEEECcc
Confidence 9999754 77 55 567999999999998765
No 409
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.70 E-value=1.1e-06 Score=98.50 Aligned_cols=36 Identities=14% Similarity=0.277 Sum_probs=23.8
Q ss_pred CCCCCCCCEEEccCCccccCCCccccCCCCCCeEecc
Q 002255 256 LSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLT 292 (947)
Q Consensus 256 ~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls 292 (947)
|.++..|+.+.+.++..+ .....|.++++|+.+.+.
T Consensus 261 F~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~ 296 (394)
T 4gt6_A 261 FDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS 296 (394)
T ss_dssp TTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC
T ss_pred eeecccccEEecccccce-ecCcccccccccccccCC
Confidence 566677777777655443 445566777777777765
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.68 E-value=4.9e-09 Score=115.10 Aligned_cols=185 Identities=14% Similarity=0.173 Sum_probs=114.7
Q ss_pred CCCCCEEEcccCcccC-c--------CCCCCCCCCCcEEecCCCcCC---------CCCcccccCCCCCcEEeccCCCCC
Q 002255 88 LSSLTVLEVMKNKLTG-Q--------IPSLSGLSSLQEVLFDDNNFT---------SVPSDFFKGLTSLQTISLDYNSFD 149 (947)
Q Consensus 88 l~~L~~L~L~~N~l~~-~--------~p~~~~l~~L~~L~L~~n~l~---------~~~~~~~~~l~~L~~L~Ls~N~l~ 149 (947)
++.++.|.+......| . ..+...+++|+.|.+..+... +.....+..+++|+.|+|++|.-.
T Consensus 106 ~~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l 185 (362)
T 2ra8_A 106 LPSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL 185 (362)
T ss_dssp GGGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC
T ss_pred chhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc
Confidence 3467888888665543 1 123456788999988765432 123344566788888888777311
Q ss_pred CCCCcccccCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccC--CcccCcC-CccccCCCCceeeeccCCCCCCC
Q 002255 150 SWVIPESLKDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAF--NFLQGPI-PLSFGKSSIQTLWLNGQKGDSKL 226 (947)
Q Consensus 150 ~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~--N~l~~~~-p~~~~~~~L~~L~l~~n~~~~~~ 226 (947)
.++. +. +++|+.|+|..|.+.......++...+|+|++|+|+. |...+.. ...+.
T Consensus 186 --~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~------------------ 243 (362)
T 2ra8_A 186 --SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFR------------------ 243 (362)
T ss_dssp --BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTG------------------
T ss_pred --eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHH------------------
Confidence 2333 32 6778888887777654443333322467777777753 2211110 00000
Q ss_pred CCchhhh--cCCCCCcEEEccCCcCcCCCC----CCCCCCCCCEEEccCCccccC----CCccccCCCCCCeEeccCCcc
Q 002255 227 NGSVAVI--QNMTSLTQLWLHGNSFTGPLP----DLSGLSSLQDFSVRDNQLTGI----VPSSLVNLHSLAVVNLTNNLF 296 (947)
Q Consensus 227 ~~~~~~~--~~l~~L~~L~L~~N~l~~~~~----~~~~l~~L~~L~l~~N~l~g~----~p~~l~~l~~L~~L~Ls~N~l 296 (947)
..+ ..+++|+.|+|.+|.+++..+ ....+++|++|+|+.|.|++. ++..+.++++|+.|+|++|.+
T Consensus 244 ----~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i 319 (362)
T 2ra8_A 244 ----PLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYL 319 (362)
T ss_dssp ----GGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBC
T ss_pred ----HHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcC
Confidence 001 247899999999999875332 123578999999999999864 445556779999999999988
Q ss_pred cc
Q 002255 297 QG 298 (947)
Q Consensus 297 ~g 298 (947)
+.
T Consensus 320 ~d 321 (362)
T 2ra8_A 320 SD 321 (362)
T ss_dssp CH
T ss_pred CH
Confidence 74
No 411
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.63 E-value=1e-09 Score=114.12 Aligned_cols=146 Identities=15% Similarity=0.110 Sum_probs=64.7
Q ss_pred CCCCceeEeCCCC-cEEEEEecC---CcccccCcc-cccCCCCCCEEEcccCcccCcCC--CCCCCCCCcE--EecCCCc
Q 002255 53 PCKWKHIQCSPSN-RVTRIQIGG---QNIEGTLPK-ELNSLSSLTVLEVMKNKLTGQIP--SLSGLSSLQE--VLFDDNN 123 (947)
Q Consensus 53 ~C~w~gv~C~~~~-~v~~l~L~~---~~l~g~~p~-~l~~l~~L~~L~L~~N~l~~~~p--~~~~l~~L~~--L~L~~n~ 123 (947)
.|+|.|+.|+..+ +|+.+...+ ..+.+.+++ .+..++. .|...+|..++.++ .|...+.|+. ++++.|+
T Consensus 77 l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~ 154 (267)
T 3rw6_A 77 LKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNR 154 (267)
T ss_dssp HHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTS
T ss_pred HHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCCH
Confidence 4899999998754 676666654 344455542 2222222 22222333333222 1333333333 3444442
Q ss_pred CC---CCCcccccCCCCCcEEeccCCCCCCC-CCcccccCCCCCCeEeccCceeeeccCcccCCCCCC--CccEEEccCC
Q 002255 124 FT---SVPSDFFKGLTSLQTISLDYNSFDSW-VIPESLKDATGLQRFSANGANITGTIPDFLGGDTIP--GLMHLHLAFN 197 (947)
Q Consensus 124 l~---~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~--~L~~L~Ls~N 197 (947)
.. ++......++++|++|+|++|+|.+. .+|..+..+++|+.|+|++|+|++. ..+. .+. +|++|+|++|
T Consensus 155 ~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~--~l~~l~L~~L~L~~N 230 (267)
T 3rw6_A 155 RSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELD--KIKGLKLEELWLDGN 230 (267)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGG--GGTTSCCSEEECTTS
T ss_pred HHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhh--hcccCCcceEEccCC
Confidence 22 11111223344555555555555431 1223344455555555555555433 1111 122 5555555555
Q ss_pred cccCcCC
Q 002255 198 FLQGPIP 204 (947)
Q Consensus 198 ~l~~~~p 204 (947)
.+.+.+|
T Consensus 231 pl~~~~~ 237 (267)
T 3rw6_A 231 SLCDTFR 237 (267)
T ss_dssp TTGGGCS
T ss_pred cCccccC
Confidence 5554443
No 412
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.60 E-value=3.5e-07 Score=99.24 Aligned_cols=137 Identities=16% Similarity=0.262 Sum_probs=101.3
Q ss_pred CCCcCceecccCceEEEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCC---C-CcceEEEEEEeCCeeEEE
Q 002255 591 NFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRH---R-HLVGLLGYCLDGNERLLV 666 (947)
Q Consensus 591 ~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h---~-niv~l~~~~~~~~~~~lV 666 (947)
.+...+.++.|....||+. |+.+++|+... ......+.+|+++++.+.+ + .+.+++++ +..++|
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~----~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lv 105 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKR----DSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNI 105 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESS----HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCc----HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEE
Confidence 5667788999999999998 67788997642 2334568999999999976 1 23455554 567899
Q ss_pred EEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccC--------------------------------
Q 002255 667 YEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAH-------------------------------- 714 (947)
Q Consensus 667 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~-------------------------------- 714 (947)
|||++|.++.+... ..++..++..++.++++.++.||+...
T Consensus 106 me~i~G~~l~~~~~-------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (320)
T 3r70_A 106 MKYIKGERITYEQY-------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKE 178 (320)
T ss_dssp EECCCCBCCCHHHH-------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHT
T ss_pred EeecCCcccccccc-------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhc
Confidence 99999988864321 124555666777888888888885321
Q ss_pred ----------------------------CCeeecCCCCCcEEEcCCCcEEEeecCcceec
Q 002255 715 ----------------------------QSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 746 (947)
Q Consensus 715 ----------------------------~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~ 746 (947)
..++|+|++|.||+++.+..+.|+||+.+...
T Consensus 179 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 179 QLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp TCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred ccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 23599999999999999766799999987644
No 413
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.55 E-value=5.1e-06 Score=92.98 Aligned_cols=292 Identities=11% Similarity=0.149 Sum_probs=166.2
Q ss_pred ccccCCC-CCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCc---CCCCCcccccCCCCCcEEeccCCCCCCCCCcccc
Q 002255 83 KELNSLS-SLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNN---FTSVPSDFFKGLTSLQTISLDYNSFDSWVIPESL 157 (947)
Q Consensus 83 ~~l~~l~-~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~---l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~p~~~ 157 (947)
.+|.+.. .|+.+.+-.+ ++..-. +|.++++|+.+.+..|. ++.+...+|..+.+|+.+.+..+ +.. .....|
T Consensus 57 ~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~-I~~~aF 133 (394)
T 4gt6_A 57 RVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTE-IDSEAF 133 (394)
T ss_dssp TTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSE-ECTTTT
T ss_pred hhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cce-ehhhhh
Confidence 3466663 5888888654 554444 68888888888887764 67777788888888888877655 322 234567
Q ss_pred cCCCCCCeEeccCceeeeccCcccCCCCCCCccEEEccCCcccCcCCccccCCCCceeeeccCCCCCCCCCchhhhcCCC
Q 002255 158 KDATGLQRFSANGANITGTIPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMT 237 (947)
Q Consensus 158 ~~l~~L~~L~l~~n~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~ 237 (947)
..+.+|+.+.+..+- .......|. .+..|+.+.+..+ ++..-...|..+.|+.+.+..+-. ......+.++.
T Consensus 134 ~~c~~L~~i~lp~~~-~~I~~~~F~--~c~~L~~i~~~~~-~~~I~~~aF~~~~l~~i~ip~~~~----~i~~~af~~c~ 205 (394)
T 4gt6_A 134 HHCEELDTVTIPEGV-TSVADGMFS--YCYSLHTVTLPDS-VTAIEERAFTGTALTQIHIPAKVT----RIGTNAFSECF 205 (394)
T ss_dssp TTCTTCCEEECCTTC-CEECTTTTT--TCTTCCEEECCTT-CCEECTTTTTTCCCSEEEECTTCC----EECTTTTTTCT
T ss_pred hhhccccccccccee-eeeccccee--cccccccccccce-eeEeccccccccceeEEEECCccc----ccccchhhhcc
Confidence 778888888886543 323333443 4677888887655 443444456556777777654311 11123355667
Q ss_pred CCcEEEccCCcCcCCCCC--------------CCCCCCCCEEEccCCccccCCCccccCCCCCCeEeccCCcccccCCCC
Q 002255 238 SLTQLWLHGNSFTGPLPD--------------LSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQGQTPKF 303 (947)
Q Consensus 238 ~L~~L~L~~N~l~~~~~~--------------~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~ 303 (947)
+|.......+........ +.....+..+.+. +.++..-...|.++.+|+.+.+.++..+ +...
T Consensus 206 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~~~--I~~~ 282 (394)
T 4gt6_A 206 ALSTITSDSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIP-NGVARIETHAFDSCAYLASVKMPDSVVS--IGTG 282 (394)
T ss_dssp TCCEEEECCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECC-TTEEEECTTTTTTCSSCCEEECCTTCCE--ECTT
T ss_pred ccceecccccccccccceeecccccccccccccccccccceEEcC-CcceEcccceeeecccccEEecccccce--ecCc
Confidence 777766665544322111 1122334444443 2333344566788888888888665432 1110
Q ss_pred -CCCcccccccCCCCcccCcCCCcCCCccceeeecccccCChhhhhccCCCCCCCCCCCCCcccCCCCceeEEEecCCCc
Q 002255 304 -NSPVRFDMAKGSNSFCLDDAGVACDGRVNVLLSIVKSVGYPAVLAESWKGNNPCNSDWKGVSCDAGGNITVVNLKNLGL 382 (947)
Q Consensus 304 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l 382 (947)
+. ...++. .+..+..+. ....-.+..+.+|+.+.|..+ +
T Consensus 283 aF~-------~c~~L~---------------------~i~l~~~i~-----------~I~~~aF~~c~~L~~i~lp~~-v 322 (394)
T 4gt6_A 283 AFM-------NCPALQ---------------------DIEFSSRIT-----------ELPESVFAGCISLKSIDIPEG-I 322 (394)
T ss_dssp TTT-------TCTTCC---------------------EEECCTTCC-----------EECTTTTTTCTTCCEEECCTT-C
T ss_pred ccc-------cccccc---------------------cccCCCccc-----------ccCceeecCCCCcCEEEeCCc-c
Confidence 00 000000 000000000 000112334457788888654 5
Q ss_pred eeeccccccCCccCCeEeccCCcccccCC-CcCCCCCCCCccccccccc
Q 002255 383 SGTISSNFSRLTSLRQLMLSGNELTGTIP-KELTTLPSLEMLDVSNNHL 430 (947)
Q Consensus 383 ~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP-~~l~~l~~L~~L~ls~N~l 430 (947)
+..-..+|.+|.+|+.+.|..+ ++ .|+ .+|.++.+|+.+++.+|..
T Consensus 323 ~~I~~~aF~~C~~L~~i~ip~s-v~-~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 323 TQILDDAFAGCEQLERIAIPSS-VT-KIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp CEECTTTTTTCTTCCEEEECTT-CC-BCCGGGGTTCTTCCEEEESSCHH
T ss_pred cEehHhHhhCCCCCCEEEECcc-cC-EEhHhHhhCCCCCCEEEECCcee
Confidence 5444567888888888888654 66 554 5688888888888887654
No 414
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.40 E-value=7.9e-07 Score=94.46 Aligned_cols=78 Identities=21% Similarity=0.230 Sum_probs=61.2
Q ss_pred CCcCceecccCceEEEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCC---CcceEEEEEEeCCeeEEEEE
Q 002255 592 FSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHR---HLVGLLGYCLDGNERLLVYE 668 (947)
Q Consensus 592 ~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~lV~e 668 (947)
....+.|+.|.++.||+++..+|+.++||+..... ......+.+|++.++.+++. .+.+++++. ..++|||
T Consensus 17 ~~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~--~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme 90 (288)
T 3d1u_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDA--PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAME 90 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTC--CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEE
T ss_pred ccceeeeCCcchhheEEEEeCCCCeEEEEecCCCC--cchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEE
Confidence 34467899999999999998889999999865331 11235788999999999875 577787763 3699999
Q ss_pred ecCCCch
Q 002255 669 YMPQGTL 675 (947)
Q Consensus 669 ~~~~gsL 675 (947)
|++++.+
T Consensus 91 ~l~g~~~ 97 (288)
T 3d1u_A 91 WVDERPP 97 (288)
T ss_dssp CCCCCCC
T ss_pred ecccCCC
Confidence 9999865
No 415
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.37 E-value=3.7e-06 Score=90.37 Aligned_cols=136 Identities=18% Similarity=0.189 Sum_probs=93.4
Q ss_pred CceecccCceEEEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCC---CcceEEEEEE-eCCeeEEEEEec
Q 002255 595 ENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHR---HLVGLLGYCL-DGNERLLVYEYM 670 (947)
Q Consensus 595 ~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~-~~~~~~lV~e~~ 670 (947)
.+.++.|....||+. |+.+++|+-. .......+.+|+++++.+.+. .+.+.+.++. ..+..++||||+
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~----~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i 95 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPK----SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKV 95 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEES----SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECC
T ss_pred eeecCCCcceeEEEE----CCEEEEEecC----CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEecc
Confidence 456888888899997 5778888742 233456889999999999753 3556676664 445678999999
Q ss_pred CCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhc--------------------------------------
Q 002255 671 PQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGL-------------------------------------- 712 (947)
Q Consensus 671 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~-------------------------------------- 712 (947)
+|..+.+.... .++..++..++.++++.|+.||+.
T Consensus 96 ~G~~l~~~~~~-------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~ 168 (306)
T 3tdw_A 96 QGQILGEDGMA-------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESL 168 (306)
T ss_dssp CSEECHHHHHT-------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHH
T ss_pred CCeECchhhhh-------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhh
Confidence 99888653211 123333444445555555555432
Q ss_pred -------------------cCCCeeecCCCCCcEEEcC---CCc-EEEeecCccee
Q 002255 713 -------------------AHQSFIHRDLKPSNILLGD---DMR-AKVADFGLVRL 745 (947)
Q Consensus 713 -------------------~~~~ivHrDlkp~Nill~~---~~~-~kl~DfGla~~ 745 (947)
....++|+|+++.||+++. ++. +.|+||+.+..
T Consensus 169 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 169 RDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1345799999999999997 455 48999997654
No 416
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.33 E-value=4.5e-06 Score=88.11 Aligned_cols=135 Identities=16% Similarity=0.159 Sum_probs=97.6
Q ss_pred ceecccCce-EEEEEEEc-CCcEEEEEEecccccChHHHHHHHHHHHHHHcCC-CCCcceEEEEEEeCCeeEEEEEecCC
Q 002255 596 NVLGRGGFG-TVYKGELH-DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVR-HRHLVGLLGYCLDGNERLLVYEYMPQ 672 (947)
Q Consensus 596 ~~lg~G~~g-~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~~~~ 672 (947)
+.+..|..| .||+.... ++..+++|+-... ...++.+|+..++.+. +--+.++++++.+++..++|||+++|
T Consensus 30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~-----~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G 104 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKGS-----VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPG 104 (272)
T ss_dssp EEEECSSSSCEEEEEECCTTCCCEEEEEEETH-----HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCS
T ss_pred EEccCCCcCCeEEEEEecCCCeEEEEEECCCC-----CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCC
Confidence 345556555 69988665 4667899976532 3457888999999884 33466889999999999999999999
Q ss_pred CchhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhc----------------------------------------
Q 002255 673 GTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGL---------------------------------------- 712 (947)
Q Consensus 673 gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~---------------------------------------- 712 (947)
.++.+...... .....++.++++.|+.||+.
T Consensus 105 ~~~~~~~~~~~---------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (272)
T 4gkh_A 105 KTAFQVLEEYP---------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWP 175 (272)
T ss_dssp EEHHHHHHHCG---------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCC
T ss_pred ccccccccCCH---------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchH
Confidence 88876543211 12234666777777777741
Q ss_pred ---------------cCCCeeecCCCCCcEEEcCCCcEEEeecCcce
Q 002255 713 ---------------AHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 744 (947)
Q Consensus 713 ---------------~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~ 744 (947)
....++|+|+.+.||+++.++.+-|+||+.+.
T Consensus 176 ~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 176 VEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 01237899999999999988777899998765
No 417
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.27 E-value=5.2e-06 Score=91.37 Aligned_cols=149 Identities=13% Similarity=0.150 Sum_probs=93.3
Q ss_pred cCCCcCceecccCceEEEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCC--cceEEEEEEeC-CeeEEE
Q 002255 590 NNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRH--LVGLLGYCLDG-NERLLV 666 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~-~~~~lV 666 (947)
......+.++.|....+|+... +|+.+++|+.... ..+..|+.+++.+.... +.++++++... +..++|
T Consensus 41 ~~~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv 112 (362)
T 3ovc_A 41 DSVSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCI 112 (362)
T ss_dssp SCCEEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEE
T ss_pred CCCceEEECCCCCcceEEEEEE-CCcEEEEEeCCch-------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEE
Confidence 3344567889999999999876 4789999976532 25788999999986543 45677777654 568999
Q ss_pred EEecCCCchhhh------------------hhccccc---C-----C----CcccHHHHH--------------------
Q 002255 667 YEYMPQGTLSRH------------------LFNRKEE---G-----L----KPLEWTRRL-------------------- 696 (947)
Q Consensus 667 ~e~~~~gsL~~~------------------l~~~~~~---~-----~----~~~~~~~~~-------------------- 696 (947)
|||++|.++.+. |+..... + . ..-.|.+.+
T Consensus 113 ~e~l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~ 192 (362)
T 3ovc_A 113 SRRAQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVS 192 (362)
T ss_dssp EECCCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTH
T ss_pred EEecCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 999998766421 1111000 0 0 000111110
Q ss_pred -HHHHHHHHHHHHHhhc-cCCCeeecCCCCCcEEEcCCCcEEEeecCcceec
Q 002255 697 -TIALDVARGVEYLHGL-AHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 746 (947)
Q Consensus 697 -~i~~~i~~~L~~LH~~-~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~ 746 (947)
.....+...++++... ....++|+|+++.||++++++.+.|+||+.+..-
T Consensus 193 ~~~~~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 193 ASVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred ccchHHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 1111122222233211 1256899999999999988778889999987643
No 418
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.24 E-value=8.1e-05 Score=82.62 Aligned_cols=60 Identities=18% Similarity=0.220 Sum_probs=46.9
Q ss_pred CCCCceeEEEecCCCceeeccccccCCccCCeEeccCCcccccCC-CcCCCCCCCCccccccc
Q 002255 367 DAGGNITVVNLKNLGLSGTISSNFSRLTSLRQLMLSGNELTGTIP-KELTTLPSLEMLDVSNN 428 (947)
Q Consensus 367 ~~~~~L~~L~Ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP-~~l~~l~~L~~L~ls~N 428 (947)
..+.+|+.+.+.++.++..-...|.++.+|+.++|..+ ++ .|+ .+|.++.+|+.+.+..|
T Consensus 283 ~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 283 SGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LK-TIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp TTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCCCCCCTT
T ss_pred ccccccccccccccccceehhhhhcCCCCCCEEEcCcc-cc-EEHHHHhhCCCCCCEEEECCc
Confidence 34567889999888888666678999999999999755 66 554 57888999999887543
No 419
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.17 E-value=1.2e-07 Score=93.66 Aligned_cols=121 Identities=13% Similarity=0.179 Sum_probs=81.8
Q ss_pred cccCcccccCCCCCCEEEcccC-cccCcC-----CCCCCCCCCcEEecCCCcCCC----CCcccccCCCCCcEEeccCCC
Q 002255 78 EGTLPKELNSLSSLTVLEVMKN-KLTGQI-----PSLSGLSSLQEVLFDDNNFTS----VPSDFFKGLTSLQTISLDYNS 147 (947)
Q Consensus 78 ~g~~p~~l~~l~~L~~L~L~~N-~l~~~~-----p~~~~l~~L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~Ls~N~ 147 (947)
...+...+...+.|++|+|++| .++..- ..+...++|++|+|++|.|+. .....+...++|++|+|++|.
T Consensus 25 ~~~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~ 104 (185)
T 1io0_A 25 EETLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNF 104 (185)
T ss_dssp HHHHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSC
T ss_pred HHHHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCc
Confidence 3344556777888888999888 776421 146667888888888888873 223345556788888888888
Q ss_pred CCCC---CCcccccCCCCCCeEec--cCceeeecc----CcccCCCCCCCccEEEccCCccc
Q 002255 148 FDSW---VIPESLKDATGLQRFSA--NGANITGTI----PDFLGGDTIPGLMHLHLAFNFLQ 200 (947)
Q Consensus 148 l~~~---~~p~~~~~l~~L~~L~l--~~n~l~~~~----p~~~~~~~l~~L~~L~Ls~N~l~ 200 (947)
|... .+...+...+.|++|+| ++|.|...- ...+. ..++|++|+|++|.+.
T Consensus 105 i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~--~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 105 ISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLE--KNTTLLKFGYHFTQQG 164 (185)
T ss_dssp CCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHH--HCSSCCEEECCCSSHH
T ss_pred CCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHH--hCCCcCEEeccCCCCC
Confidence 8541 13456677778888888 778776442 23332 3467888888888775
No 420
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.14 E-value=1.4e-07 Score=97.89 Aligned_cols=79 Identities=25% Similarity=0.359 Sum_probs=53.0
Q ss_pred CCCCccEEEccCCcccC--cCCccccCCCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccCCcCcCC--CCCCCCCC
Q 002255 185 TIPGLMHLHLAFNFLQG--PIPLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFTGP--LPDLSGLS 260 (947)
Q Consensus 185 ~l~~L~~L~Ls~N~l~~--~~p~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~--~~~~~~l~ 260 (947)
.+++|+.|+|++|+|++ .+|.. +..+++|+.|+|++|+|++. +..+..+
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~--------------------------~~~l~~L~~L~Ls~N~i~~~~~l~~l~~l- 220 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSI--------------------------VQKAPNLKILNLSGNELKSERELDKIKGL- 220 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTH--------------------------HHHSTTCCEEECTTSCCCSGGGGGGGTTS-
T ss_pred hCCCCCEEECCCCCCCCCccchhH--------------------------HhhCCCCCEEECCCCccCCchhhhhcccC-
Confidence 35677777777777775 22222 23477788888888887764 1223344
Q ss_pred CCCEEEccCCccccCCC-------ccccCCCCCCeEe
Q 002255 261 SLQDFSVRDNQLTGIVP-------SSLVNLHSLAVVN 290 (947)
Q Consensus 261 ~L~~L~l~~N~l~g~~p-------~~l~~l~~L~~L~ 290 (947)
+|++|+|++|.+.+.+| ..+..+++|+.||
T Consensus 221 ~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 221 KLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp CCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred CcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 78888888888887666 2467788888886
No 421
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.13 E-value=2.6e-07 Score=91.40 Aligned_cols=119 Identities=17% Similarity=0.197 Sum_probs=71.3
Q ss_pred CCCCCCCcEEecCCC-cCCC----CCcccccCCCCCcEEeccCCCCCCC---CCcccccCCCCCCeEeccCceeeec---
Q 002255 108 LSGLSSLQEVLFDDN-NFTS----VPSDFFKGLTSLQTISLDYNSFDSW---VIPESLKDATGLQRFSANGANITGT--- 176 (947)
Q Consensus 108 ~~~l~~L~~L~L~~n-~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~---~~p~~~~~l~~L~~L~l~~n~l~~~--- 176 (947)
+...+.|++|+|++| .++. .....+...++|++|+|++|+|... .+...+...++|++|+|++|.|...
T Consensus 32 l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~ 111 (185)
T 1io0_A 32 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGIL 111 (185)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHH
T ss_pred HhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHH
Confidence 556778888888888 7763 2234456677888888888887431 1234455556777777777777643
Q ss_pred -cCcccCCCCCCCccEEEc--cCCcccCcCCccccCCCCceeeeccCCCCCCCCCchhhhcCCCCCcEEEccCCcCc
Q 002255 177 -IPDFLGGDTIPGLMHLHL--AFNFLQGPIPLSFGKSSIQTLWLNGQKGDSKLNGSVAVIQNMTSLTQLWLHGNSFT 250 (947)
Q Consensus 177 -~p~~~~~~~l~~L~~L~L--s~N~l~~~~p~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~ 250 (947)
+...+. ..++|++|+| ++|.+.......+ ...+...++|++|+|++|.+.
T Consensus 112 ~l~~~L~--~n~~L~~L~L~~~~N~i~~~g~~~l----------------------~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 112 ALVEALQ--SNTSLIELRIDNQSQPLGNNVEMEI----------------------ANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHGGG--GCSSCCEEECCCCSSCCCHHHHHHH----------------------HHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHH--hCCCceEEEecCCCCCCCHHHHHHH----------------------HHHHHhCCCcCEEeccCCCCC
Confidence 233333 3456777777 6666653222111 123344566777777777664
No 422
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.06 E-value=6.5e-06 Score=90.73 Aligned_cols=83 Identities=10% Similarity=-0.007 Sum_probs=56.3
Q ss_pred Ccee-cccCceEEEEEEEc-------CCcEEEEEEeccccc-ChHHHHHHHHHHHHHHcCC-C--CCcceEEEEEEeC--
Q 002255 595 ENVL-GRGGFGTVYKGELH-------DGTKIAVKRMESAVV-SEKGFAEFKSEIAVLTKVR-H--RHLVGLLGYCLDG-- 660 (947)
Q Consensus 595 ~~~l-g~G~~g~Vy~~~~~-------~g~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~~-- 660 (947)
.+.| +.|....+|+.... +++.+++|+-..... .......+.+|+.+++.+. + -.+.++++++.++
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3567 88889999998764 267889997654310 0001135678888888884 3 3566788877655
Q ss_pred -CeeEEEEEecCCCchhh
Q 002255 661 -NERLLVYEYMPQGTLSR 677 (947)
Q Consensus 661 -~~~~lV~e~~~~gsL~~ 677 (947)
+..++||||++|..+.+
T Consensus 105 ~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TSSCEEEEECCCCBCCCB
T ss_pred cCCceEEEEecCCCChhh
Confidence 35689999999877643
No 423
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.94 E-value=8.1e-05 Score=81.29 Aligned_cols=142 Identities=20% Similarity=0.306 Sum_probs=81.1
Q ss_pred ceecccCceEEEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCC--CCcceEEE------EEEeCCeeEEEE
Q 002255 596 NVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRH--RHLVGLLG------YCLDGNERLLVY 667 (947)
Q Consensus 596 ~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~------~~~~~~~~~lV~ 667 (947)
+.|+.|..+.||+....+| .+++|+.... . .++..|+.+++.+.. -.+.+++. +...++..++||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~---~---~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~ 110 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP---E---KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVY 110 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC---H---HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC---H---HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEE
Confidence 4566677899999987654 5899988642 2 233445555655531 12333332 123467789999
Q ss_pred EecCCCchh--------------hhhhccccc-----C----CCcccHHHHH----------------------------
Q 002255 668 EYMPQGTLS--------------RHLFNRKEE-----G----LKPLEWTRRL---------------------------- 696 (947)
Q Consensus 668 e~~~~gsL~--------------~~l~~~~~~-----~----~~~~~~~~~~---------------------------- 696 (947)
||++|..+. ..+|..... . .....|...+
T Consensus 111 ~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 190 (346)
T 2q83_A 111 DWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQ 190 (346)
T ss_dssp ECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHH
T ss_pred EeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHH
Confidence 999986542 112211110 0 0112332211
Q ss_pred ---HHHHHHHHHHHHHhh----------ccCCCeeecCCCCCcEEEcCCCcEEEeecCcce
Q 002255 697 ---TIALDVARGVEYLHG----------LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 744 (947)
Q Consensus 697 ---~i~~~i~~~L~~LH~----------~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~ 744 (947)
.+..++..++++|+. .....++|+|+++.||+++.++.+.|+||+.+.
T Consensus 191 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 191 EIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 111223345666653 125789999999999999888899999999764
No 424
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.83 E-value=0.0014 Score=72.43 Aligned_cols=58 Identities=9% Similarity=0.126 Sum_probs=44.2
Q ss_pred CceeEEEecCCCceeeccccccCCccCCeEeccCCcccccCCCcCCCCCCCCccccccc
Q 002255 370 GNITVVNLKNLGLSGTISSNFSRLTSLRQLMLSGNELTGTIPKELTTLPSLEMLDVSNN 428 (947)
Q Consensus 370 ~~L~~L~Ls~n~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ls~N 428 (947)
.+|+.+.+..+ +...-...|.++++|+.++|.+|.++-.-...|.++.+|+.++|.++
T Consensus 263 ~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~ 320 (379)
T 4h09_A 263 TALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA 320 (379)
T ss_dssp TTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT
T ss_pred ehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc
Confidence 45677777543 44344567899999999999999998333567999999999998654
No 425
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.76 E-value=0.0001 Score=82.38 Aligned_cols=77 Identities=17% Similarity=0.169 Sum_probs=50.0
Q ss_pred CceecccCceEEEEEEEc-CCcEEEEEEeccccc--Ch---HHHHHHHHHHHHHHcCCC--CCcc-eEEEEEEeCCeeEE
Q 002255 595 ENVLGRGGFGTVYKGELH-DGTKIAVKRMESAVV--SE---KGFAEFKSEIAVLTKVRH--RHLV-GLLGYCLDGNERLL 665 (947)
Q Consensus 595 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~---~~~~~~~~E~~~l~~l~h--~niv-~l~~~~~~~~~~~l 665 (947)
.+.||.|.++.||++... +++.|+||....... .+ ....++..|+++++.+.. +..+ +++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 468999999999999654 468899998653211 00 122456779999988742 3444 55543 3455689
Q ss_pred EEEecCCC
Q 002255 666 VYEYMPQG 673 (947)
Q Consensus 666 V~e~~~~g 673 (947)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
No 426
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.69 E-value=0.00027 Score=75.45 Aligned_cols=141 Identities=17% Similarity=0.167 Sum_probs=93.6
Q ss_pred cCceecccCceEEEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHHHHcCC---CCCcceEEEEEEeCCeeEEEEEec
Q 002255 594 EENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVR---HRHLVGLLGYCLDGNERLLVYEYM 670 (947)
Q Consensus 594 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lV~e~~ 670 (947)
..+.|+.|.+..+|+.... +..+++|+.... ....+..|++.|+.+. ...+.++++++...+..++||||+
T Consensus 40 ~~~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~-----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l 113 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLINDE-VQTVFVKINERS-----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEAL 113 (312)
T ss_dssp EEEEECCSSSSEEEEEESS-SCEEEEEEEEGG-----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECC
T ss_pred eeEEeCCccceeeeEEEEC-CCeEEEEeCCcc-----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEec
Confidence 3467899999999998764 678899986532 2467889999999884 356788999888888899999999
Q ss_pred CCCchhh-----------hhhcccc---cCC--------------CcccHHHHH---HHHH----------------HHH
Q 002255 671 PQGTLSR-----------HLFNRKE---EGL--------------KPLEWTRRL---TIAL----------------DVA 703 (947)
Q Consensus 671 ~~gsL~~-----------~l~~~~~---~~~--------------~~~~~~~~~---~i~~----------------~i~ 703 (947)
++..+.. .+|.... .+. -.-+|.+.. ++.. .++
T Consensus 114 ~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~ 193 (312)
T 3jr1_A 114 NKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIV 193 (312)
T ss_dssp CCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHH
T ss_pred cCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHH
Confidence 9876421 2222211 000 012465432 1111 111
Q ss_pred HH-HHHHhh-ccCCCeeecCCCCCcEEEcCCCcEEEeecC
Q 002255 704 RG-VEYLHG-LAHQSFIHRDLKPSNILLGDDMRAKVADFG 741 (947)
Q Consensus 704 ~~-L~~LH~-~~~~~ivHrDlkp~Nill~~~~~~kl~DfG 741 (947)
+. ...|.. .....+||+|+.+.|++++.++ +.|.||.
T Consensus 194 ~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 194 QIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 11 223321 1247899999999999999887 8899974
No 427
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.66 E-value=0.00012 Score=77.79 Aligned_cols=80 Identities=20% Similarity=0.230 Sum_probs=57.2
Q ss_pred cCCCcCceecccCceEEEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCC---CcceEEEEEEeCCeeEEE
Q 002255 590 NNFSEENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHR---HLVGLLGYCLDGNERLLV 666 (947)
Q Consensus 590 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~lV 666 (947)
......+.+|.|..+.||+.+..+|+.|.||+-.... ......|.+|++.|+.+.-. -+.+++++. ..++|
T Consensus 15 ~~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~--~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv 88 (288)
T 3f7w_A 15 REVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDA--PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLA 88 (288)
T ss_dssp CCEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTC--CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEE
T ss_pred CCeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCC--cchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEE
Confidence 3455667899999999999999999999999865432 11224578899999988422 344555442 24799
Q ss_pred EEecCCCch
Q 002255 667 YEYMPQGTL 675 (947)
Q Consensus 667 ~e~~~~gsL 675 (947)
|||++++..
T Consensus 89 ~e~l~~~~~ 97 (288)
T 3f7w_A 89 MEWVDERPP 97 (288)
T ss_dssp EECCCCCCC
T ss_pred EEeecccCC
Confidence 999987643
No 428
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.39 E-value=0.0011 Score=71.58 Aligned_cols=160 Identities=13% Similarity=0.137 Sum_probs=90.4
Q ss_pred ecHHHHHHHhcCCCcC-----ceecccCceEEEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCC--cce
Q 002255 580 ISIQVLRNVTNNFSEE-----NVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRH--LVG 652 (947)
Q Consensus 580 ~~~~~~~~~~~~~~~~-----~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~ 652 (947)
++.+++..+..+|... +.|+.|....+|+....+| .+++|+..... ..+++..|+.+++.+...+ +.+
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~----~~~~l~~e~~~l~~L~~~g~~vP~ 81 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV----EKNDLPFFLGLMQHLAAKGLSCPL 81 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-------CCHHHHHHHHHHHHHHTTCCCCC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC----CHHHHHHHHHHHHHHHHCCCCCCc
Confidence 3456666666667652 4566788889999987755 68899876521 1234566778777774222 223
Q ss_pred EEEE------EEeCCeeEEEEEecCCCchhh--------------hhhccc-c---cC---CCcccHHHHHH--------
Q 002255 653 LLGY------CLDGNERLLVYEYMPQGTLSR--------------HLFNRK-E---EG---LKPLEWTRRLT-------- 697 (947)
Q Consensus 653 l~~~------~~~~~~~~lV~e~~~~gsL~~--------------~l~~~~-~---~~---~~~~~~~~~~~-------- 697 (947)
++.. ....+..++||+|++|..+.. .+|... . .. .....|...+.
T Consensus 82 ~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 161 (322)
T 2ppq_A 82 PLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADE 161 (322)
T ss_dssp BCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGG
T ss_pred ccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHh
Confidence 3321 123456789999998865321 112110 0 00 01123433111
Q ss_pred ----HHHHHHHHHHHHhhc----cCCCeeecCCCCCcEEEcCCCcEEEeecCcce
Q 002255 698 ----IALDVARGVEYLHGL----AHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 744 (947)
Q Consensus 698 ----i~~~i~~~L~~LH~~----~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~ 744 (947)
+...+.+.+++++.. ....++|+|+++.||+++.+..+.|+||+.+.
T Consensus 162 ~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 162 VEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp TSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 011234455555532 13579999999999999987666899998654
No 429
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.38 E-value=0.00087 Score=75.32 Aligned_cols=79 Identities=18% Similarity=0.124 Sum_probs=47.5
Q ss_pred CCCeeecCCCCCcEEEcCCCcEEEeecCcceecCCCCCcceeecccccccccCccccccC---CcCcccccccHHHHHHH
Q 002255 714 HQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTG---RVTTKVDVFSFGVILME 790 (947)
Q Consensus 714 ~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwSlGvil~e 790 (947)
...++|+|+++.||+++.++ ++++||+.+..-.........- ..-...|++|+..... ......++......+|+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYL-GNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN 308 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHH-HHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHH-HHHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence 57899999999999998876 9999999887543211100000 0001345666544311 11223455577777777
Q ss_pred HHhC
Q 002255 791 LITG 794 (947)
Q Consensus 791 lltg 794 (947)
.+++
T Consensus 309 ~y~~ 312 (420)
T 2pyw_A 309 LFNK 312 (420)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7664
No 430
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.28 E-value=0.0031 Score=68.11 Aligned_cols=144 Identities=11% Similarity=0.051 Sum_probs=82.4
Q ss_pred ceecccCceEEEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCC--cceEEEE-----EEeCCeeEEEEE
Q 002255 596 NVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRH--LVGLLGY-----CLDGNERLLVYE 668 (947)
Q Consensus 596 ~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~-----~~~~~~~~lV~e 668 (947)
..++ |....||+....+|+.+++|+......+ ...+..|..+++.+.... +++++.. ...++..++|||
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~---~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~ 107 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPERWT---ADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFP 107 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTTSC---HHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEE
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCCCC---HHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEE
Confidence 4566 8888999987777878999998643222 245667888888774222 3444432 223456689999
Q ss_pred ecCCCchhh-----------h---hhcccc----cCCCcccHHHH----HHH---------------HHHHHHHHHHHhh
Q 002255 669 YMPQGTLSR-----------H---LFNRKE----EGLKPLEWTRR----LTI---------------ALDVARGVEYLHG 711 (947)
Q Consensus 669 ~~~~gsL~~-----------~---l~~~~~----~~~~~~~~~~~----~~i---------------~~~i~~~L~~LH~ 711 (947)
|++|..+.. . +|.... ......++... ..+ ...+.+.++.+..
T Consensus 108 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 187 (328)
T 1zyl_A 108 SVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTA 187 (328)
T ss_dssp CCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 998754421 0 111100 00011222111 000 0111112233321
Q ss_pred c----cCCCeeecCCCCCcEEEcCCCcEEEeecCccee
Q 002255 712 L----AHQSFIHRDLKPSNILLGDDMRAKVADFGLVRL 745 (947)
Q Consensus 712 ~----~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~ 745 (947)
. ....++|+|+++.||+++ + .+.|+||+.+..
T Consensus 188 ~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 188 HWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp HCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred HhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 1 245689999999999999 4 899999987654
No 431
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.16 E-value=0.0012 Score=71.65 Aligned_cols=144 Identities=15% Similarity=0.113 Sum_probs=73.9
Q ss_pred ceecccCceE-EEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCC--CCcceEEEEEEeCCeeEEEEEecCC
Q 002255 596 NVLGRGGFGT-VYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRH--RHLVGLLGYCLDGNERLLVYEYMPQ 672 (947)
Q Consensus 596 ~~lg~G~~g~-Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lV~e~~~~ 672 (947)
+.|+.|+... +|+....+|+.+++|...... ..++..|+.+++.+.. -.+.+++.+..+.+ ++|||++.+
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~-----~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~ 96 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEE-----GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGD 96 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTT-----TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCS
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCC-----CccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCC
Confidence 4566665554 667765446778887654321 0234557777777742 23456676643333 789999977
Q ss_pred Cchhhhhhccc---------------------ccCCCcccHHHHH-------H-------------HHHHHHHHHHHHh-
Q 002255 673 GTLSRHLFNRK---------------------EEGLKPLEWTRRL-------T-------------IALDVARGVEYLH- 710 (947)
Q Consensus 673 gsL~~~l~~~~---------------------~~~~~~~~~~~~~-------~-------------i~~~i~~~L~~LH- 710 (947)
..+.+.+.... ......++..... . ....+...++.+.
T Consensus 97 ~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~ 176 (333)
T 3csv_A 97 ALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILS 176 (333)
T ss_dssp CBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred cchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 66654332110 0001111111000 0 0001111222221
Q ss_pred --hccCCCeeecCCCCCcEEEcCC----CcEEEeecCcceec
Q 002255 711 --GLAHQSFIHRDLKPSNILLGDD----MRAKVADFGLVRLA 746 (947)
Q Consensus 711 --~~~~~~ivHrDlkp~Nill~~~----~~~kl~DfGla~~~ 746 (947)
......++|||+.+.||+++.+ +.+.|+||+.+..-
T Consensus 177 ~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 177 AQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp HHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred hcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 1124679999999999999875 68999999987654
No 432
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.06 E-value=0.0014 Score=69.82 Aligned_cols=72 Identities=13% Similarity=0.136 Sum_probs=45.9
Q ss_pred cCceecccCceEEEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCc-ceEEEEEEeCCeeEEEEEec-C
Q 002255 594 EENVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHL-VGLLGYCLDGNERLLVYEYM-P 671 (947)
Q Consensus 594 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lV~e~~-~ 671 (947)
-.+.|+.|....+|+. +.+++|+..... . ......+|+.+++.+...++ .+++++ +.+.-++|+||+ +
T Consensus 22 ~i~~l~gG~tN~~~~~-----~~~vlR~~~~~~--~-~~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~ 91 (301)
T 3dxq_A 22 GPLERLGGLTNLVFRA-----GDLCLRIPGKGT--E-EYINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAG 91 (301)
T ss_dssp SCEEEESCSSEEEEEE-----TTEEEEEECC-------CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTT
T ss_pred ceeEcCCcccccccee-----eeEEEECCCCCc--c-ceeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCC
Confidence 3678999999999998 568888775431 1 11123568888887753333 355544 344457899999 6
Q ss_pred CCch
Q 002255 672 QGTL 675 (947)
Q Consensus 672 ~gsL 675 (947)
+.++
T Consensus 92 g~~l 95 (301)
T 3dxq_A 92 AQTM 95 (301)
T ss_dssp CEEC
T ss_pred CccC
Confidence 6554
No 433
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.01 E-value=0.0013 Score=73.89 Aligned_cols=73 Identities=19% Similarity=0.250 Sum_probs=50.1
Q ss_pred CceecccCceEEEEEEEcC--------CcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCc-ceEEEEEEeCCeeEE
Q 002255 595 ENVLGRGGFGTVYKGELHD--------GTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHL-VGLLGYCLDGNERLL 665 (947)
Q Consensus 595 ~~~lg~G~~g~Vy~~~~~~--------g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~l 665 (947)
.+.|+.|....+|++...+ ++.+++|+..... . .+.+.+|+.+++.+...++ .++++.+.+ .+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~-~---~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~ 149 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE-T---ESHLVAESVIFTLLSERHLGPKLYGIFSG----GR 149 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC-C---HHHHHHHHHHHHHHHHTTSSSCEEEEETT----EE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC-c---HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CE
Confidence 4578888889999998763 5789999874321 1 1345579999988854344 566765532 38
Q ss_pred EEEecCCCch
Q 002255 666 VYEYMPQGTL 675 (947)
Q Consensus 666 V~e~~~~gsL 675 (947)
||||++|.++
T Consensus 150 v~e~l~G~~l 159 (429)
T 1nw1_A 150 LEEYIPSRPL 159 (429)
T ss_dssp EECCCCEEEC
T ss_pred EEEEeCCccc
Confidence 9999986444
No 434
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.94 E-value=0.00013 Score=69.95 Aligned_cols=33 Identities=6% Similarity=0.228 Sum_probs=13.1
Q ss_pred CCCEEEcccCcccCc-CCCCCCCCCCcEEecCCC
Q 002255 90 SLTVLEVMKNKLTGQ-IPSLSGLSSLQEVLFDDN 122 (947)
Q Consensus 90 ~L~~L~L~~N~l~~~-~p~~~~l~~L~~L~L~~n 122 (947)
+|+.|||+++.++.. +..+.++++|++|+|++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 344444444443321 112334444444444444
No 435
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.92 E-value=0.0028 Score=69.51 Aligned_cols=143 Identities=15% Similarity=0.167 Sum_probs=82.9
Q ss_pred CceecccCceEEEEEEEc--------CCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCC-cceEEEEEEeCCeeEE
Q 002255 595 ENVLGRGGFGTVYKGELH--------DGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRH-LVGLLGYCLDGNERLL 665 (947)
Q Consensus 595 ~~~lg~G~~g~Vy~~~~~--------~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~l 665 (947)
.+.+..|-...+|+.... +++.|++|+.... ......+.+|.++++.+...+ ..++++++.+ .+
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~---~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~ 127 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI---LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GR 127 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc---cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----cc
Confidence 356777888899999864 2478999985321 123456678999999885333 3566666543 39
Q ss_pred EEEecCCCchhhh-----------------hhcccccCCCcc--cHHHHHHHHHHHHH-------------------HHH
Q 002255 666 VYEYMPQGTLSRH-----------------LFNRKEEGLKPL--EWTRRLTIALDVAR-------------------GVE 707 (947)
Q Consensus 666 V~e~~~~gsL~~~-----------------l~~~~~~~~~~~--~~~~~~~i~~~i~~-------------------~L~ 707 (947)
||||++|..+... +|.....-.+.. -|.++.++..++.. .++
T Consensus 128 v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 207 (379)
T 3feg_A 128 LEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMG 207 (379)
T ss_dssp EEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHH
T ss_pred EEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHH
Confidence 9999998665321 111111001112 24444444443321 223
Q ss_pred HHh----h-ccCCCeeecCCCCCcEEEcCC----CcEEEeecCcce
Q 002255 708 YLH----G-LAHQSFIHRDLKPSNILLGDD----MRAKVADFGLVR 744 (947)
Q Consensus 708 ~LH----~-~~~~~ivHrDlkp~Nill~~~----~~~kl~DfGla~ 744 (947)
.|. . .....++|+|+.+.||+++.+ +.+.++||..+.
T Consensus 208 ~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 208 NLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 332 1 123568999999999999876 789999998764
No 436
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.86 E-value=0.0016 Score=59.58 Aligned_cols=37 Identities=27% Similarity=0.525 Sum_probs=28.3
Q ss_pred CCcEEecCCCcCCCCCcccccCCCCCcEEeccCCCCC
Q 002255 113 SLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNSFD 149 (947)
Q Consensus 113 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 149 (947)
+|++|+|++|+|+.+++..|..+++|++|+|++|.+.
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4677777777777777777778888888888888764
No 437
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.80 E-value=0.00032 Score=67.33 Aligned_cols=85 Identities=18% Similarity=0.094 Sum_probs=60.8
Q ss_pred CCCCcEEecCCCcCCCCCcccccCCCCCcEEeccCCC-CCCCCCcccccCC----CCCCeEeccCce-eeeccCcccCCC
Q 002255 111 LSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDYNS-FDSWVIPESLKDA----TGLQRFSANGAN-ITGTIPDFLGGD 184 (947)
Q Consensus 111 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~p~~~~~l----~~L~~L~l~~n~-l~~~~p~~~~~~ 184 (947)
--+|++|||+++.++..--..+..+++|++|+|+++. |+. .--..++.+ ++|++|+|++|. ++..--..+.
T Consensus 60 ~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD-~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~-- 136 (176)
T 3e4g_A 60 KYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIED-GCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALH-- 136 (176)
T ss_dssp CCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCH-HHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGG--
T ss_pred CceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCH-HHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHh--
Confidence 3579999999999886555567889999999999986 533 112334443 368888888874 7655444555
Q ss_pred CCCCccEEEccCCc
Q 002255 185 TIPGLMHLHLAFNF 198 (947)
Q Consensus 185 ~l~~L~~L~Ls~N~ 198 (947)
.+++|++|+|+++.
T Consensus 137 ~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 137 HFRNLKYLFLSDLP 150 (176)
T ss_dssp GCTTCCEEEEESCT
T ss_pred cCCCCCEEECCCCC
Confidence 57888888888875
No 438
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.71 E-value=0.0027 Score=69.90 Aligned_cols=74 Identities=15% Similarity=0.147 Sum_probs=45.1
Q ss_pred CceecccCceEEEEEEEcC---------CcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCc-ceEEEEEEeCCeeE
Q 002255 595 ENVLGRGGFGTVYKGELHD---------GTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHL-VGLLGYCLDGNERL 664 (947)
Q Consensus 595 ~~~lg~G~~g~Vy~~~~~~---------g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~ 664 (947)
.+.++.|....+|+....+ ++.+++|+..... ....+...|.++++.+...++ .++++.. . -+
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~---~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~ 110 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV---DELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GG 110 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG---GGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TE
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc---cceecHHHHHHHHHHHHhcCCCCceEEec--C--Cc
Confidence 3567788888999998764 2688888765421 111224678888888853343 4666544 2 37
Q ss_pred EEEEecCCCch
Q 002255 665 LVYEYMPQGTL 675 (947)
Q Consensus 665 lV~e~~~~gsL 675 (947)
+||||++|..+
T Consensus 111 ~v~e~i~G~~l 121 (369)
T 3c5i_A 111 RIEEWLYGDPL 121 (369)
T ss_dssp EEEECCCSEEC
T ss_pred EEEEEecCCcC
Confidence 89999987544
No 439
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.62 E-value=0.01 Score=66.91 Aligned_cols=74 Identities=11% Similarity=0.093 Sum_probs=48.4
Q ss_pred CceecccCceEEEEEEEcC-CcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCc-ceEEEEEEeCCeeEEEEEecCC
Q 002255 595 ENVLGRGGFGTVYKGELHD-GTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHL-VGLLGYCLDGNERLLVYEYMPQ 672 (947)
Q Consensus 595 ~~~lg~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lV~e~~~~ 672 (947)
.+.|+.|-...+|+....+ +..+++|+..... . ...+..+|..+++.+...++ .++++++. + .+||||++|
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~--~-~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G 185 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKT--D-EIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDG 185 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-C--C-SCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCS
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCCh--h-hhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCC
Confidence 4578888889999998875 4788898864321 1 11112578999999975555 46676662 2 359999987
Q ss_pred Cch
Q 002255 673 GTL 675 (947)
Q Consensus 673 gsL 675 (947)
.++
T Consensus 186 ~~l 188 (458)
T 2qg7_A 186 YAL 188 (458)
T ss_dssp EEC
T ss_pred ccC
Confidence 554
No 440
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.59 E-value=0.0091 Score=64.70 Aligned_cols=33 Identities=24% Similarity=0.438 Sum_probs=28.5
Q ss_pred CCCeeecCCCCCcEEEcCCCcEEEeecCcceec
Q 002255 714 HQSFIHRDLKPSNILLGDDMRAKVADFGLVRLA 746 (947)
Q Consensus 714 ~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~ 746 (947)
...++|+|+.+.||++++++.+.|+||+.+...
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 357999999999999998889999999876543
No 441
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.53 E-value=0.00034 Score=68.45 Aligned_cols=118 Identities=16% Similarity=0.153 Sum_probs=73.7
Q ss_pred cccCCCCCCeEeccCc-eeeec----cCcccCCCCCCCccEEEccCCcccCcCCccccCCCCceeeeccCCCCCCCCCch
Q 002255 156 SLKDATGLQRFSANGA-NITGT----IPDFLGGDTIPGLMHLHLAFNFLQGPIPLSFGKSSIQTLWLNGQKGDSKLNGSV 230 (947)
Q Consensus 156 ~~~~l~~L~~L~l~~n-~l~~~----~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~l~~n~~~~~~~~~~ 230 (947)
.+.+-+.|++|+|++| +|... +...+. .-+.|+.|+|++|++...--..+ .
T Consensus 36 ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~--~N~~L~~L~L~~n~igd~ga~al----------------------A 91 (197)
T 1pgv_A 36 LREDDTDLKEVNINNMKRVSKERIRSLIEAAC--NSKHIEKFSLANTAISDSEARGL----------------------I 91 (197)
T ss_dssp HHTTCSSCCEEECTTCCSSCHHHHHHHHHHHT--TCSCCCEEECTTSCCBHHHHTTH----------------------H
T ss_pred HHhcCCCccEEECCCCCCCCHHHHHHHHHHHh--hCCCcCEEEccCCCCChHHHHHH----------------------H
Confidence 3445567777777764 55422 233333 23567777777777653322222 1
Q ss_pred hhhcCCCCCcEEEccCCcCcCCCC-----CCCCCCCCCEEEccCC---cccc----CCCccccCCCCCCeEeccCCccc
Q 002255 231 AVIQNMTSLTQLWLHGNSFTGPLP-----DLSGLSSLQDFSVRDN---QLTG----IVPSSLVNLHSLAVVNLTNNLFQ 297 (947)
Q Consensus 231 ~~~~~l~~L~~L~L~~N~l~~~~~-----~~~~l~~L~~L~l~~N---~l~g----~~p~~l~~l~~L~~L~Ls~N~l~ 297 (947)
..+..-++|+.|+|++|.|+...- .+..-+.|+.|+|++| .+.. .+...+..-++|+.|+|+.|.+.
T Consensus 92 ~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 92 ELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 334456789999999999875322 2556677999999865 3332 24556777788999999888754
No 442
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.44 E-value=0.00062 Score=66.63 Aligned_cols=68 Identities=6% Similarity=0.172 Sum_probs=37.5
Q ss_pred CcccccCCCCCCEEEcccC-cccCc----C-CCCCCCCCCcEEecCCCcCCC----CCcccccCCCCCcEEeccCCCC
Q 002255 81 LPKELNSLSSLTVLEVMKN-KLTGQ----I-PSLSGLSSLQEVLFDDNNFTS----VPSDFFKGLTSLQTISLDYNSF 148 (947)
Q Consensus 81 ~p~~l~~l~~L~~L~L~~N-~l~~~----~-p~~~~l~~L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~Ls~N~l 148 (947)
+...+.+-+.|+.|+|++| .|... + ..+..-+.|+.|+|++|+|+. -+...+..-+.|++|+|+.|.|
T Consensus 33 l~~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~I 110 (197)
T 1pgv_A 33 INRLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFL 110 (197)
T ss_dssp HHHHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBC
T ss_pred HHHHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcC
Confidence 3344556677888888875 66431 1 134445566666666666662 2223333445566666666655
No 443
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.27 E-value=0.0069 Score=55.23 Aligned_cols=56 Identities=20% Similarity=0.225 Sum_probs=46.0
Q ss_pred cEEEccCCcCc--CCCCCCCCCCCCCEEEccCCccccCCCccccCCCCCCeEeccCCccc
Q 002255 240 TQLWLHGNSFT--GPLPDLSGLSSLQDFSVRDNQLTGIVPSSLVNLHSLAVVNLTNNLFQ 297 (947)
Q Consensus 240 ~~L~L~~N~l~--~~~~~~~~l~~L~~L~l~~N~l~g~~p~~l~~l~~L~~L~Ls~N~l~ 297 (947)
..++.+++.|+ ..+..+. .+|+.|+|++|+|+..-+..|..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 47888999998 5444433 56999999999999766777899999999999999986
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.97 E-value=0.022 Score=62.69 Aligned_cols=145 Identities=18% Similarity=0.199 Sum_probs=82.1
Q ss_pred ceecccCceEEEEEEEcC--------CcEEEEEEeccccc------------ChH----HHHHHHHHHHHHHcCCCCC-c
Q 002255 596 NVLGRGGFGTVYKGELHD--------GTKIAVKRMESAVV------------SEK----GFAEFKSEIAVLTKVRHRH-L 650 (947)
Q Consensus 596 ~~lg~G~~g~Vy~~~~~~--------g~~vavK~~~~~~~------------~~~----~~~~~~~E~~~l~~l~h~n-i 650 (947)
+.|..|-...+|++...+ ++.|.+++.-.... +.+ ..+....|..+++.+...+ .
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 566667888999988754 36788887643210 000 0122345888988885333 4
Q ss_pred ceEEEEEEeCCeeEEEEEecCCCchhhh-----------------hhcccccCCCcc--cHHHHHHHHHHHH--------
Q 002255 651 VGLLGYCLDGNERLLVYEYMPQGTLSRH-----------------LFNRKEEGLKPL--EWTRRLTIALDVA-------- 703 (947)
Q Consensus 651 v~l~~~~~~~~~~~lV~e~~~~gsL~~~-----------------l~~~~~~~~~~~--~~~~~~~i~~~i~-------- 703 (947)
.++++++.. .+|+||+++-+|... +|.....-.... -|....++..++.
T Consensus 138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 567766542 289999987555221 111111101112 2334433433221
Q ss_pred --------------HHHH----HHhhc-cCCCeeecCCCCCcEEEcCC------CcEEEeecCcce
Q 002255 704 --------------RGVE----YLHGL-AHQSFIHRDLKPSNILLGDD------MRAKVADFGLVR 744 (947)
Q Consensus 704 --------------~~L~----~LH~~-~~~~ivHrDlkp~Nill~~~------~~~kl~DfGla~ 744 (947)
.-+. +|... ....++|+|+.+.||+++++ +.+.++||..+.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 1122 22221 23568999999999999887 789999998654
No 445
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=95.86 E-value=0.037 Score=54.34 Aligned_cols=102 Identities=15% Similarity=0.106 Sum_probs=65.9
Q ss_pred chhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCCCcEEEcCCCcEEEeecCcceecCCCCCcc
Q 002255 674 TLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPDNGKHS 753 (947)
Q Consensus 674 sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~~~~~~~~~~ 753 (947)
+|.+.|..+. .++++.++|.++.|.+.+|.-+-... .+ ..+=+.|..|++..+|.|.+.+ +.+.
T Consensus 34 SL~eIL~~~~----~PlsEEqaWALc~Qc~~~L~~~~~~~-~~-~~~i~~~~~i~l~~dG~V~f~~-~~s~--------- 97 (229)
T 2yle_A 34 SLEEILRLYN----QPINEEQAWAVCYQCCGSLRAAARRR-QP-RHRVRSAAQIRVWRDGAVTLAP-AADD--------- 97 (229)
T ss_dssp EHHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTT-CC-CCCCCSGGGEEEETTSCEEECC-C------------
T ss_pred cHHHHHHHcC----CCcCHHHHHHHHHHHHHHHHhhhhcc-cC-CceecCCcceEEecCCceeccc-cccc---------
Confidence 7888887654 56999999999999999987762111 11 1233457999999999998864 1110
Q ss_pred eeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCC
Q 002255 754 IETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKA 797 (947)
Q Consensus 754 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p 797 (947)
.....+.|||... ...+.+.=|||+|+++|..+--..|
T Consensus 98 -----~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 -----AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp --------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred -----ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 1123466888653 3456778899999999999874433
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.55 E-value=0.14 Score=56.81 Aligned_cols=142 Identities=13% Similarity=0.187 Sum_probs=84.2
Q ss_pred CceecccCceEEEEEEEcC--------CcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCc-ceEEEEEEeCCeeEE
Q 002255 595 ENVLGRGGFGTVYKGELHD--------GTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHL-VGLLGYCLDGNERLL 665 (947)
Q Consensus 595 ~~~lg~G~~g~Vy~~~~~~--------g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~l 665 (947)
.+.+..|-...+|+....+ ++.+++|+.... . ....+..+|..+++.+...++ .++++.+ . -++
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~--t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~ 147 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKH--V-GKFYDSKVELDVFRYLSNINIAPNIIADF--P--EGR 147 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCC--C--CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCC--c-chhcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCE
Confidence 4567778888999998763 578999986432 1 111233578888888853333 4555533 2 278
Q ss_pred EEEecCCCchhhh-----------------hhcccc-----c---CCCcccHHHHHHHHHHH------------------
Q 002255 666 VYEYMPQGTLSRH-----------------LFNRKE-----E---GLKPLEWTRRLTIALDV------------------ 702 (947)
Q Consensus 666 V~e~~~~gsL~~~-----------------l~~~~~-----~---~~~~~~~~~~~~i~~~i------------------ 702 (947)
||||++|..|... +|.... . ...+.-|.++.++..++
T Consensus 148 I~efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~ 227 (424)
T 3mes_A 148 IEEFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSK 227 (424)
T ss_dssp EEECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHH
T ss_pred EEEEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHH
Confidence 9999998764210 111111 0 11122344443333222
Q ss_pred -HHHHHHHhh---------------------ccCCCeeecCCCCCcEEEcCCCcEEEeecCcce
Q 002255 703 -ARGVEYLHG---------------------LAHQSFIHRDLKPSNILLGDDMRAKVADFGLVR 744 (947)
Q Consensus 703 -~~~L~~LH~---------------------~~~~~ivHrDlkp~Nill~~~~~~kl~DfGla~ 744 (947)
...+.+|.. .....++|+|+.+.||+ +.++.+.++||..+.
T Consensus 228 l~~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~ 290 (424)
T 3mes_A 228 ILEEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSA 290 (424)
T ss_dssp HHHHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred HHHHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCC
Confidence 222333321 11346899999999999 888899999998765
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=91.15 E-value=0.85 Score=50.27 Aligned_cols=30 Identities=30% Similarity=0.501 Sum_probs=24.8
Q ss_pred CeeecCCCCCcEEE------cCCCcEEEeecCccee
Q 002255 716 SFIHRDLKPSNILL------GDDMRAKVADFGLVRL 745 (947)
Q Consensus 716 ~ivHrDlkp~Nill------~~~~~~kl~DfGla~~ 745 (947)
.++|+|+.+.||++ +++..++++||.+|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 35799999999999 4567899999987653
No 448
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=85.19 E-value=0.11 Score=58.69 Aligned_cols=62 Identities=10% Similarity=0.082 Sum_probs=17.9
Q ss_pred cCceecccCceEEEEEEEcC-CcEEEE------EEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEEE
Q 002255 594 EENVLGRGGFGTVYKGELHD-GTKIAV------KRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYCL 658 (947)
Q Consensus 594 ~~~~lg~G~~g~Vy~~~~~~-g~~vav------K~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 658 (947)
..+.|| ||.||+|.+.. ..+||| |..+....+.+....+.+|..+++.++|||+++.+++..
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 346666 99999998863 367888 776655445555667899999999999999999988765
No 449
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=85.14 E-value=0.045 Score=38.09 Aligned_cols=31 Identities=23% Similarity=0.547 Sum_probs=17.2
Q ss_pred cceEEEeehhHHHHHHHHHhheeEEEEeeccC
Q 002255 490 TGKIVGSVVGVVCGAFIVGLGFCLYTRKRKRS 521 (947)
Q Consensus 490 ~~~i~~~v~gvv~~~~i~~l~~~~~~r~r~~~ 521 (947)
...++++++|++ .++++++.+++|.|+|+.+
T Consensus 11 ~~~Ia~~vVGvl-l~vi~~l~~~~~~RRR~~~ 41 (44)
T 2jwa_A 11 LTSIISAVVGIL-LVVVLGVVFGILIKRRQQK 41 (44)
T ss_dssp HHHHHHHHHHHH-HHHHHHHHHHHHHHHHCSC
T ss_pred ccchHHHHHHHH-HHHHHHHHHHhheehhhhh
Confidence 345677777744 4455555555555554443
No 450
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=82.02 E-value=3.4 Score=40.58 Aligned_cols=82 Identities=10% Similarity=0.042 Sum_probs=59.3
Q ss_pred CCCCcceEEEEEEeCCeeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHHHHHHH-HHhhccCCCeeecCCCC
Q 002255 646 RHRHLVGLLGYCLDGNERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVE-YLHGLAHQSFIHRDLKP 724 (947)
Q Consensus 646 ~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~-~LH~~~~~~ivHrDlkp 724 (947)
.||++ -..+-.+++...+.|+.-+++.=...+. ..+..++++++.+|+.... ++++ -+|--++|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~--------~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P 112 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR--------KTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCP 112 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH--------TSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH--------hcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeC
Confidence 57877 4445567778777777653432222331 2667888999999888776 5553 57788999
Q ss_pred CcEEEcCCCcEEEeecCc
Q 002255 725 SNILLGDDMRAKVADFGL 742 (947)
Q Consensus 725 ~Nill~~~~~~kl~DfGl 742 (947)
+||+++.++.+++.-.|+
T Consensus 113 ~NL~f~~~~~p~i~hRGi 130 (219)
T 4ano_A 113 ENLMFNRALEPFFLHVGV 130 (219)
T ss_dssp GGEEECTTCCEEESCCEE
T ss_pred ceEEEeCCCcEEEEEcCC
Confidence 999999999999987775
No 451
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=82.02 E-value=0.075 Score=36.02 Aligned_cols=24 Identities=25% Similarity=0.362 Sum_probs=15.3
Q ss_pred CcceEEEeehhHHHHHHHHHhhee
Q 002255 489 NTGKIVGSVVGVVCGAFIVGLGFC 512 (947)
Q Consensus 489 ~~~~i~~~v~gvv~~~~i~~l~~~ 512 (947)
+.+.+.++++|+++++.++....+
T Consensus 9 s~GaIAGiVvG~v~gv~li~~l~~ 32 (38)
T 2k1k_A 9 TGGEIVAVIFGLLLGAALLLGILV 32 (38)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCceeeeehHHHHHHHHHHHHHH
Confidence 456778888888777655444333
No 452
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=79.79 E-value=3.1 Score=40.73 Aligned_cols=115 Identities=11% Similarity=0.133 Sum_probs=76.2
Q ss_pred CCCCcceEEEEEEeCCeeEEEEEecCCC-chhhhhhcccccCCCcccHHHHHHHHHHHHHHHHHHhhccCCCeeecCCCC
Q 002255 646 RHRHLVGLLGYCLDGNERLLVYEYMPQG-TLSRHLFNRKEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKP 724 (947)
Q Consensus 646 ~h~niv~l~~~~~~~~~~~lV~e~~~~g-sL~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~ivHrDlkp 724 (947)
.||+.++. .+-.+++...+.|+.-+.+ ++.. + +..+...+++++.+|+....++++ =+|--++|
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-i--------k~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P 107 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-I--------KSFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAP 107 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-G--------GGSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-H--------HhcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEec
Confidence 67888866 5666667766666654322 2222 2 236778899999999988866663 46778999
Q ss_pred CcEEEcCCCcEEEeecCcceecCCCCCcceeecccccccccCccccccCCcCcccccccHHHHHHHHHhCCCCCC
Q 002255 725 SNILLGDDMRAKVADFGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALD 799 (947)
Q Consensus 725 ~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~p~~ 799 (947)
+||+++.++.+++.-.|+...+ +|. ..+...=.-.+=+++..+++++..|+
T Consensus 108 ~NL~f~~~~~p~i~~RGik~~l-------------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 108 DELFFTRDGLPIAKTRGLQNVV-------------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp GGEEECTTSCEEESCCEETTTB-------------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred ceEEEcCCCCEEEEEccCccCC-------------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999999877753322 222 11111112346778888888887764
No 453
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=79.75 E-value=0.15 Score=35.66 Aligned_cols=27 Identities=33% Similarity=0.613 Sum_probs=10.4
Q ss_pred EEEeehhHHHHHHHHHhheeEEEEeec
Q 002255 493 IVGSVVGVVCGAFIVGLGFCLYTRKRK 519 (947)
Q Consensus 493 i~~~v~gvv~~~~i~~l~~~~~~r~r~ 519 (947)
|.+.++|-+++++++++.+++|.|+|+
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RRr~ 39 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRRRH 39 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhhhH
Confidence 333344322333333344444444433
No 454
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=78.13 E-value=0.11 Score=36.30 Aligned_cols=28 Identities=36% Similarity=0.623 Sum_probs=11.0
Q ss_pred eEEEeehhHHHHHHHHHhheeEEEEeec
Q 002255 492 KIVGSVVGVVCGAFIVGLGFCLYTRKRK 519 (947)
Q Consensus 492 ~i~~~v~gvv~~~~i~~l~~~~~~r~r~ 519 (947)
.|.+.++|-+++++++++.+++|.|+|+
T Consensus 11 aIA~gVVgGv~~v~ii~~~~~~~~RRRr 38 (44)
T 2l2t_A 11 LIAAGVIGGLFILVIVGLTFAVYVRRKS 38 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred eEEEeehHHHHHHHHHHHHHHHHhhhhh
Confidence 3444444423333333344444444433
No 455
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=34.04 E-value=46 Score=27.91 Aligned_cols=38 Identities=21% Similarity=0.354 Sum_probs=19.2
Q ss_pred CCCCCCCCcEEecCCCcCCCCCcccccCCCCCcEEeccC
Q 002255 107 SLSGLSSLQEVLFDDNNFTSVPSDFFKGLTSLQTISLDY 145 (947)
Q Consensus 107 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 145 (947)
.|.++++|+.+.|..+ ++.|-..+|.++.+|+.+.+..
T Consensus 15 aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 15 LFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp TTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred HhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 3555555555555432 4444445555555555555543
No 456
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=32.69 E-value=0.51 Score=31.00 Aligned_cols=25 Identities=28% Similarity=0.416 Sum_probs=12.5
Q ss_pred EEEeehhHHHHHHHHHhheeEEEEee
Q 002255 493 IVGSVVGVVCGAFIVGLGFCLYTRKR 518 (947)
Q Consensus 493 i~~~v~gvv~~~~i~~l~~~~~~r~r 518 (947)
+++.++| +++++++++.+.+|.|+|
T Consensus 10 IaagVvg-lll~vii~l~~~~~iRRr 34 (35)
T 1iij_A 10 IIATVVG-VLLFLILVVVVGILIKRR 34 (35)
T ss_dssp HHHHHHH-HHHHHHHTTTTTHHHHHC
T ss_pred eHHHHHH-HHHHHHHHHHhheEEeec
Confidence 4444555 444445555555555544
No 457
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=32.17 E-value=3.4e+02 Score=30.92 Aligned_cols=86 Identities=15% Similarity=0.138 Sum_probs=50.4
Q ss_pred ceEEEEEEeCCeeEEEEEecCCCchhhhhhc----------ccccCCCc--ccHHHHHHHHHHHHH--HHHHHhhccCCC
Q 002255 651 VGLLGYCLDGNERLLVYEYMPQGTLSRHLFN----------RKEEGLKP--LEWTRRLTIALDVAR--GVEYLHGLAHQS 716 (947)
Q Consensus 651 v~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~----------~~~~~~~~--~~~~~~~~i~~~i~~--~L~~LH~~~~~~ 716 (947)
++.+.+........+ .|++++.++.+.+.. ........ ..|..+..++..+|- -+.|+=.
T Consensus 402 i~~Y~Vipls~~~Gl-IE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YILG----- 475 (614)
T 3ls8_A 402 LTPYKVLATSTKHGF-MQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILG----- 475 (614)
T ss_dssp CCCCCEEESSSSEEE-EECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHT-----
T ss_pred eeccEEEEecCCCce-EEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheeee-----
Confidence 345555555544444 477776665554432 11111111 234555555555443 3555542
Q ss_pred eeecCCCCCcEEEcCCCcEEEeecCcce
Q 002255 717 FIHRDLKPSNILLGDDMRAKVADFGLVR 744 (947)
Q Consensus 717 ivHrDlkp~Nill~~~~~~kl~DfGla~ 744 (947)
| +|=+++|||++.+|++.=+|||.+.
T Consensus 476 i--gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 476 V--GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp C--CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred c--cCCCCcceeEcCCCCEeeeehHHhh
Confidence 2 6888999999999999999999863
No 458
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=28.48 E-value=1.9e+02 Score=30.22 Aligned_cols=135 Identities=13% Similarity=0.105 Sum_probs=68.4
Q ss_pred ceecccCceEEEEEEEcCCcEEEEEEecccccChHHHHHHHHHHHHHHcCCCCCcceEEEEE------------------
Q 002255 596 NVLGRGGFGTVYKGELHDGTKIAVKRMESAVVSEKGFAEFKSEIAVLTKVRHRHLVGLLGYC------------------ 657 (947)
Q Consensus 596 ~~lg~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~------------------ 657 (947)
+..-.|. +.||.+.. ++..|+||-.. ....+-+-.++...-.+.-|+..-+. +.
T Consensus 75 ~~s~~Gs-tgvff~~t-d~~~~VVK~s~-----~l~~E~l~s~LA~~LGlpiP~~Riv~-~~~~E~~e~~~~L~~~~~~~ 146 (342)
T 1cja_A 75 ERSEKGT-EGLFFVET-ESGVFIVKRST-----NIESETFCSLLCMRLGLHAPKVRVVS-SNSEEGTNMLECLAAIDKSF 146 (342)
T ss_dssp EECCSTT-SCEEEEEE-SSCEEEEECCT-----THHHHHHHHHHHHHHTCCCCCEEEEE-SSSHHHHHHHHHHHHHCSSS
T ss_pred EeccCCC-CCeEEEEe-CCCEEEEeCcH-----HHHHHHHHHHHHHHhCCCCCCeeEEe-eCcHHHHHHHHHHHHhhhhh
Confidence 4445555 45555544 47899999431 22334445555555555555432111 11
Q ss_pred -----EeCCeeEEEEEecCCCchhhhhhcccccCCCcccHHHHHHHHHHH--HHHHHHHhhcc-CCCee-ecCCCCCcEE
Q 002255 658 -----LDGNERLLVYEYMPQGTLSRHLFNRKEEGLKPLEWTRRLTIALDV--ARGVEYLHGLA-HQSFI-HRDLKPSNIL 728 (947)
Q Consensus 658 -----~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i--~~~L~~LH~~~-~~~iv-HrDlkp~Nil 728 (947)
......+++|||++|..|.+.-+.... ..+.. +.+.++ +-++.++.... ..+.+ +.--.+.|||
T Consensus 147 ~~l~~l~~~~~~l~meyv~G~~L~e~~~~~~~---~~f~~----~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL 219 (342)
T 1cja_A 147 RVITTLANQANILLMELVRGITLNKLTTTSAP---EVLTK----STMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIM 219 (342)
T ss_dssp CHHHHHTTCSEEEEEECCCEEESTTCCSSSHH---HHSCH----HHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEE
T ss_pred HHHHHhhcccceehhhhcCCCccccchhhhhh---hhcCH----HHHHhhchhheehhhhcCCccCcccccCCCChhheE
Confidence 012245699999987666543211000 01121 222222 23445544322 22222 2235889999
Q ss_pred EcCCCc-EEEeecCccee
Q 002255 729 LGDDMR-AKVADFGLVRL 745 (947)
Q Consensus 729 l~~~~~-~kl~DfGla~~ 745 (947)
+++++. +.++|-+.+..
T Consensus 220 ~~~~n~~~~~IDhn~af~ 237 (342)
T 1cja_A 220 LSERGATVVPIDSKIIPL 237 (342)
T ss_dssp EESBTTCEEECSCCCCCC
T ss_pred EeCCCCeEEEEcCCcccc
Confidence 987654 89999988754
No 459
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=20.95 E-value=1.8e+02 Score=24.23 Aligned_cols=48 Identities=13% Similarity=0.216 Sum_probs=36.1
Q ss_pred CcccccCcccccCCCCCCEEEcccCcccCcCC-CCCCCCCCcEEecCCCc
Q 002255 75 QNIEGTLPKELNSLSSLTVLEVMKNKLTGQIP-SLSGLSSLQEVLFDDNN 123 (947)
Q Consensus 75 ~~l~g~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~l~~L~~L~L~~n~ 123 (947)
.+++.+-..+|.++++|+.+.|-.+ ++..-. .|.++.+|+.+.+....
T Consensus 6 ~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~~ 54 (100)
T 2lz0_A 6 EPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGED 54 (100)
T ss_dssp CCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCSC
T ss_pred CccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCCC
Confidence 3455444567999999999999875 444434 79999999999998754
Done!