Query 002256
Match_columns 946
No_of_seqs 370 out of 2146
Neff 6.7
Searched_HMMs 46136
Date Thu Mar 28 20:01:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002256.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002256hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1066 Glucosidase II catalyt 100.0 2E-169 4E-174 1422.7 61.9 797 53-940 47-914 (915)
2 KOG1065 Maltase glucoamylase a 100.0 7E-164 1E-168 1427.3 58.2 725 53-895 55-784 (805)
3 PLN02763 hydrolase, hydrolyzin 100.0 2E-144 5E-149 1309.0 66.6 595 192-866 61-671 (978)
4 COG1501 Alpha-glucosidases, fa 100.0 5E-133 1E-137 1205.0 65.1 617 148-856 107-735 (772)
5 PRK10658 putative alpha-glucos 100.0 1E-130 2E-135 1177.5 67.1 622 61-782 22-665 (665)
6 PRK10426 alpha-glucosidase; Pr 100.0 9E-121 2E-125 1089.9 56.8 519 190-789 67-627 (635)
7 PF01055 Glyco_hydro_31: Glyco 100.0 2E-110 5E-115 973.7 38.1 437 294-785 1-441 (441)
8 cd06602 GH31_MGAM_SI_GAA This 100.0 3.6E-92 7.9E-97 790.6 32.5 334 313-714 1-339 (339)
9 cd06603 GH31_GANC_GANAB_alpha 100.0 5.1E-89 1.1E-93 766.8 31.5 333 313-696 1-339 (339)
10 cd06604 GH31_glucosidase_II_Ma 100.0 1.4E-88 3.1E-93 763.5 31.3 333 313-696 1-339 (339)
11 cd06600 GH31_MGAM-like This fa 100.0 1.4E-88 3E-93 756.0 30.5 314 313-696 1-317 (317)
12 cd06601 GH31_lyase_GLase GLase 100.0 1.1E-83 2.5E-88 716.7 25.7 300 313-679 1-332 (332)
13 cd06598 GH31_transferase_CtsZ 100.0 2.9E-78 6.4E-83 673.4 27.5 304 313-679 1-317 (317)
14 cd06593 GH31_xylosidase_YicI Y 100.0 1E-77 2.3E-82 667.7 28.2 303 313-681 1-308 (308)
15 cd06591 GH31_xylosidase_XylS X 100.0 2E-76 4.4E-81 659.2 27.6 301 313-670 1-317 (319)
16 cd06599 GH31_glycosidase_Aec37 100.0 5.9E-76 1.3E-80 654.9 25.6 303 313-672 1-317 (317)
17 cd06597 GH31_transferase_CtsY 100.0 2.1E-75 4.6E-80 654.9 24.8 294 313-666 1-328 (340)
18 cd06594 GH31_glucosidase_YihQ 100.0 1.7E-74 3.7E-79 642.2 25.9 291 313-666 1-310 (317)
19 cd06595 GH31_xylosidase_XylS-l 100.0 5.6E-71 1.2E-75 608.3 23.6 278 312-670 1-290 (292)
20 cd06589 GH31 The enzymes of gl 100.0 1.6E-66 3.5E-71 565.8 22.6 260 313-672 1-265 (265)
21 cd06592 GH31_glucosidase_KIAA1 100.0 1.3E-59 2.8E-64 520.7 22.1 278 316-672 12-303 (303)
22 cd06596 GH31_CPE1046 CPE1046 i 100.0 2E-47 4.4E-52 402.2 16.4 236 313-686 1-261 (261)
23 PF13802 Gal_mutarotas_2: Gala 99.3 1.2E-11 2.7E-16 107.0 7.2 65 204-275 1-67 (68)
24 PF02065 Melibiase: Melibiase; 99.2 2.5E-10 5.5E-15 130.7 19.1 133 333-474 55-194 (394)
25 COG3345 GalA Alpha-galactosida 98.5 2.2E-06 4.7E-11 98.4 16.8 169 296-473 262-444 (687)
26 PLN03231 putative alpha-galact 98.2 3.1E-05 6.7E-10 87.5 16.5 131 334-471 16-184 (357)
27 PLN02899 alpha-galactosidase 98.1 0.0001 2.2E-09 87.3 17.8 131 334-471 46-216 (633)
28 PLN02229 alpha-galactosidase 98.0 5.3E-05 1.2E-09 87.2 14.1 70 334-404 78-154 (427)
29 PLN02808 alpha-galactosidase 98.0 0.00029 6.2E-09 80.6 18.6 118 312-471 26-154 (386)
30 PLN02692 alpha-galactosidase 97.9 0.00029 6.3E-09 80.9 17.9 127 303-471 41-178 (412)
31 PLN02355 probable galactinol-- 96.9 0.031 6.8E-07 68.1 17.8 136 261-397 131-313 (758)
32 PLN02219 probable galactinol-- 96.7 0.05 1.1E-06 66.3 17.4 105 292-397 159-305 (775)
33 PF14871 GHL6: Hypothetical gl 96.2 0.02 4.3E-07 56.4 8.7 84 380-471 46-132 (132)
34 PLN02711 Probable galactinol-- 96.0 0.73 1.6E-05 56.6 21.6 104 293-397 174-326 (777)
35 PLN02684 Probable galactinol-- 95.2 0.36 7.9E-06 59.1 15.3 104 293-397 163-304 (750)
36 PF02638 DUF187: Glycosyl hydr 93.9 0.73 1.6E-05 52.0 13.2 131 334-470 17-161 (311)
37 TIGR02456 treS_nterm trehalose 93.3 1.2 2.6E-05 54.1 14.6 134 333-472 25-199 (539)
38 PF13199 Glyco_hydro_66: Glyco 93.2 0.25 5.4E-06 59.6 8.4 133 333-471 115-266 (559)
39 TIGR01515 branching_enzym alph 92.8 1 2.2E-05 55.7 12.9 93 374-471 201-296 (613)
40 PRK10785 maltodextrin glucosid 92.3 1.2 2.7E-05 54.7 13.0 131 334-472 177-337 (598)
41 PF05691 Raffinose_syn: Raffin 92.2 3.7 8E-05 51.0 16.4 105 292-397 155-309 (747)
42 PRK10933 trehalose-6-phosphate 92.2 1.3 2.9E-05 53.9 12.8 134 334-473 31-203 (551)
43 TIGR02403 trehalose_treC alpha 91.4 2.8 6E-05 51.1 14.4 136 333-473 24-196 (543)
44 TIGR02103 pullul_strch alpha-1 90.8 0.68 1.5E-05 58.9 8.6 89 379-472 405-498 (898)
45 COG1649 Uncharacterized protei 90.4 1.4 3.1E-05 51.1 10.1 143 324-470 49-206 (418)
46 PRK03705 glycogen debranching 89.7 1.2 2.6E-05 55.2 9.3 89 379-471 243-337 (658)
47 TIGR02104 pulA_typeI pullulana 89.1 1.7 3.7E-05 53.5 10.1 90 378-472 229-321 (605)
48 TIGR02100 glgX_debranch glycog 89.0 1.5 3.2E-05 54.8 9.5 92 378-472 245-343 (688)
49 COG1523 PulA Type II secretory 88.3 1.8 3.8E-05 53.8 9.3 91 379-472 266-361 (697)
50 PRK14510 putative bifunctional 88.3 1.5 3.2E-05 58.1 9.2 94 378-472 247-344 (1221)
51 PRK09505 malS alpha-amylase; R 88.1 3.4 7.5E-05 51.4 11.7 29 444-472 435-463 (683)
52 PLN00196 alpha-amylase; Provis 88.0 9.9 0.00021 44.9 14.9 136 335-472 43-205 (428)
53 PRK12313 glycogen branching en 87.8 5 0.00011 49.8 13.0 93 374-472 215-311 (633)
54 TIGR01370 cysRS possible cyste 86.9 2 4.3E-05 48.5 8.0 102 351-472 64-169 (315)
55 KOG1065 Maltase glucoamylase a 86.5 0.19 4.2E-06 61.9 -0.3 168 555-731 471-639 (805)
56 PLN02960 alpha-amylase 86.3 6.1 0.00013 50.1 12.3 132 334-473 414-559 (897)
57 COG0296 GlgB 1,4-alpha-glucan 85.9 17 0.00036 44.8 15.5 148 319-472 144-305 (628)
58 PF00128 Alpha-amylase: Alpha 85.6 1.4 3.1E-05 48.2 6.1 130 337-472 5-170 (316)
59 PF13200 DUF4015: Putative gly 84.6 11 0.00024 42.6 12.4 127 326-471 3-145 (316)
60 PLN02361 alpha-amylase 84.1 12 0.00025 43.9 12.8 132 336-472 29-181 (401)
61 TIGR02402 trehalose_TreZ malto 83.8 5.9 0.00013 48.2 10.6 82 379-472 161-246 (542)
62 PF01120 Alpha_L_fucos: Alpha- 83.6 2.4 5.1E-05 48.6 6.8 103 369-474 85-217 (346)
63 PLN02447 1,4-alpha-glucan-bran 83.4 6.6 0.00014 49.3 10.9 132 334-473 248-393 (758)
64 TIGR02102 pullulan_Gpos pullul 83.4 4.2 9E-05 53.2 9.5 86 379-472 556-644 (1111)
65 KOG0471 Alpha-amylase [Carbohy 83.3 4.6 9.9E-05 49.2 9.4 125 348-473 50-216 (545)
66 PLN03244 alpha-amylase; Provis 82.7 3.4 7.4E-05 51.5 7.9 95 374-472 436-533 (872)
67 PRK05402 glycogen branching en 81.4 13 0.00027 47.1 12.6 131 334-472 263-406 (726)
68 PRK09441 cytoplasmic alpha-amy 81.2 12 0.00027 44.7 11.9 33 440-472 203-235 (479)
69 PRK14706 glycogen branching en 80.8 11 0.00024 46.8 11.5 95 374-472 212-308 (639)
70 PRK14705 glycogen branching en 80.6 8.9 0.00019 50.7 11.0 94 374-472 810-906 (1224)
71 KOG0470 1,4-alpha-glucan branc 79.0 4.8 0.0001 49.4 7.3 90 379-472 312-404 (757)
72 PLN02784 alpha-amylase 78.6 19 0.0004 45.8 12.3 134 336-472 521-675 (894)
73 PRK12568 glycogen branching en 77.6 6.1 0.00013 49.5 7.9 99 368-472 309-410 (730)
74 COG0366 AmyA Glycosidases [Car 75.2 28 0.0006 41.4 12.6 132 334-471 27-199 (505)
75 PLN02982 galactinol-raffinose 72.3 2.7E+02 0.0059 35.3 19.6 71 292-363 182-266 (865)
76 PLN02877 alpha-amylase/limit d 69.2 18 0.00038 46.8 9.2 89 379-472 467-561 (970)
77 smart00812 Alpha_L_fucos Alpha 68.8 9.6 0.00021 44.4 6.4 28 369-399 75-102 (384)
78 COG2342 Predicted extracellula 68.4 41 0.00088 37.2 10.4 107 349-474 41-150 (300)
79 PF02449 Glyco_hydro_42: Beta- 60.0 20 0.00043 41.5 6.8 124 334-476 8-140 (374)
80 smart00642 Aamy Alpha-amylase 55.5 39 0.00085 34.5 7.3 66 333-400 16-92 (166)
81 PF14885 GHL15: Hypothetical g 55.0 22 0.00049 31.9 4.7 55 416-472 18-76 (79)
82 cd06416 GH25_Lys1-like Lys-1 i 47.2 27 0.00059 36.4 4.8 74 325-401 58-133 (196)
83 PRK15447 putative protease; Pr 45.6 65 0.0014 36.2 7.7 116 335-469 14-137 (301)
84 cd02742 GH20_hexosaminidase Be 44.5 1.1E+02 0.0023 34.4 9.3 124 327-461 8-146 (303)
85 PRK15063 isocitrate lyase; Pro 34.6 81 0.0018 37.1 6.4 66 331-403 286-351 (428)
86 KOG2366 Alpha-D-galactosidase 34.6 57 0.0012 37.6 4.9 66 335-401 59-131 (414)
87 PRK13840 sucrose phosphorylase 34.5 5.6E+02 0.012 31.1 13.5 128 334-471 18-194 (495)
88 cd04934 ACT_AK-Hom3_1 CT domai 32.9 1.2E+02 0.0026 26.6 5.8 51 336-390 16-66 (73)
89 cd06570 GH20_chitobiase-like_1 29.5 6.1E+02 0.013 28.7 12.2 124 327-461 10-145 (311)
90 PF00728 Glyco_hydro_20: Glyco 29.4 1.4E+02 0.0029 33.9 7.2 141 327-473 10-166 (351)
91 cd06565 GH20_GcnA-like Glycosy 29.1 8E+02 0.017 27.5 13.1 132 327-473 8-141 (301)
92 cd04883 ACT_AcuB C-terminal AC 27.4 2.2E+02 0.0049 23.8 6.6 57 336-395 13-69 (72)
93 PF01373 Glyco_hydro_14: Glyco 26.9 2E+02 0.0042 33.8 7.7 92 336-436 16-124 (402)
94 PF01301 Glyco_hydro_35: Glyco 26.4 1E+02 0.0023 34.9 5.5 74 325-405 16-90 (319)
95 PF07611 DUF1574: Protein of u 25.9 86 0.0019 36.0 4.6 74 365-475 241-314 (345)
96 COG0826 Collagenase and relate 25.7 2.4E+02 0.0052 32.5 8.2 99 352-454 27-136 (347)
97 cd06564 GH20_DspB_LnbB-like Gl 24.9 3.9E+02 0.0084 30.3 9.7 119 328-462 10-154 (326)
98 PF12138 Spherulin4: Spherulat 24.3 1.3E+02 0.0028 33.0 5.5 101 301-422 55-166 (253)
99 PF10566 Glyco_hydro_97: Glyco 23.5 1.9E+02 0.004 32.3 6.5 66 334-401 30-96 (273)
100 smart00557 IG_FLMN Filamin-typ 21.4 2.7E+02 0.0058 25.3 6.2 32 89-120 32-63 (93)
101 PF03537 Glyco_hydro_114: Glyc 21.3 1.2E+02 0.0025 26.8 3.5 20 382-401 40-59 (74)
102 PF11308 GHL1-3: Glycosyl hydr 21.1 2.2E+02 0.0047 32.3 6.5 54 414-471 70-127 (307)
103 PTZ00445 p36-lilke protein; Pr 20.7 2.6E+02 0.0057 30.0 6.6 62 335-398 28-98 (219)
104 smart00632 Aamy_C Aamy_C domai 20.3 4.1E+02 0.009 23.5 7.0 61 719-780 10-79 (81)
No 1
>KOG1066 consensus Glucosidase II catalytic (alpha) subunit and related enzymes, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.8e-169 Score=1422.67 Aligned_cols=797 Identities=31% Similarity=0.563 Sum_probs=681.8
Q ss_pred CCCCCCeEEe--EEEEeCCeEEEEEeecccCCCCCCCCceeEEEEEEEecCEEEEEEEeCC---CCceecCccCCCCCCC
Q 002256 53 TKIGKGYRLI--SIEEVDGGILGHLQVKEKNNIYGPDIPLLQLYVKHETEDRLRVHITDAQ---KQRWEVPYNLLPREQP 127 (946)
Q Consensus 53 ~~~~~gY~v~--~~~~~~~~~~a~L~~~~~~~~~g~di~~L~l~v~~~~~~~lrvkI~d~~---~~r~evP~~l~p~~~~ 127 (946)
++...+|++. ++...+++++|.|..+.+.. .|.|+++.+.++++|++|++.. .+||++|+.|+..+..
T Consensus 47 ~~~~~~y~l~~~si~~~~~~l~a~l~~~~~~~-------~l~~sl~~Lkd~~vR~~IDE~~~~~rkRy~~~~~lv~~~~~ 119 (915)
T KOG1066|consen 47 TPSLTGYELLADSITHYEDVLTANLINKQNKV-------LLPLSLSGLKDSTVRFQIDEKESALRKRYQVPDALVSEPEE 119 (915)
T ss_pred cCCCCceeeecccceecCCceEEeeeecCCCc-------eeeEEEEEecCceEEEEECCcccccccccCCchhhcCcchh
Confidence 3445689885 67677899999997543322 7999999999999999999865 6899999998764432
Q ss_pred CccccccccccCCCceeeecCCCeEEEEEEecCcEEEEEEecCCeEEEecCC--------C--CC-CCC-CCceEecc--
Q 002256 128 PKLKQTIGRTRKNPIAVSDYSSNGLIFSYSADPFSFAVKRKSNGETLFNTSS--------D--ES-DPF-GPMVFKDQ-- 193 (946)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~PF~f~v~r~s~g~vlf~t~~--------~--~~-~~~-~~l~f~dq-- 193 (946)
.... ....+ .........+.++++.++.+||.+.+.++..-.+..|..+ . .. ... .+..+++.
T Consensus 120 ~~~~-~~~~~--~t~~~~~~~~g~~~vvv~~~PF~v~~~~~~~lv~svN~~~~L~fE~~r~K~~~~~e~~~~g~WeE~Fk 196 (915)
T KOG1066|consen 120 VRIS-VSKND--ETATKIVGTNGKYKVVVTAKPFRVDFFEDDELVVSVNARGLLNFEHFRTKEEGPEETDENGFWEETFK 196 (915)
T ss_pred eeEE-eeecC--CcccEEEEecCCeEEEEEeCCeEEEEEeCCcEEEEEcccceeehhhccccccCccccccccchhhhhh
Confidence 2211 11101 1112234456789999999999999998633233333321 0 00 000 11112222
Q ss_pred -----------EEEEEEecCCCceeeecCCCCCCCCcccCC----CCcEEeeeccCCCCCCC--CCccceeeeEEEecCC
Q 002256 194 -----------YLEISTKLPKDASLYGLGENTQPHGIKLYP----NDPYTLYTTDVSAINLN--TDLYGSHPVYMDLRNV 256 (946)
Q Consensus 194 -----------~l~~st~l~~~~~iYGlGE~~~~~~~~l~~----~~~~~l~n~D~~~~~~~--~~lYgs~Pf~~~~~~~ 256 (946)
-+.+.++++...++||++||+.. |+|+. .++|+|||.|.+.|+.+ +.||||+||+++++.
T Consensus 197 ~~~DskP~Gp~SVglD~sF~~~~~vyGIPEHA~s--~~Lk~T~g~~ePYRLyNlDVFEYe~~spmalYGSIP~m~ah~~- 273 (915)
T KOG1066|consen 197 THHDSKPHGPESVGLDFSFVGSKNVYGIPEHADS--LRLKDTSGGSEPYRLYNLDVFEYELNSPMALYGSIPFMLAHGP- 273 (915)
T ss_pred cccCCCCCCCceeEEeEEecccceeecCcccccc--eEeeccCCCCCceeEeecceEEEecCCcchheecccEEEecCC-
Confidence 35567788888999999999984 66653 37999999999998775 789999999999977
Q ss_pred CCCCceEEEEEecCCceeEEEeC----------------------CeEEEEEEccEEEEEEEeCCChHHHHHHHHhhcCC
Q 002256 257 NGEGAAHGVLLLSSNGMDVFYKG----------------------TSLTYKIIGGVFDFYFFAGPSPLAVVDQYTAFIGR 314 (946)
Q Consensus 257 ~~~g~~~Gvf~~Ns~~~dv~~~~----------------------~~~~~~~~gG~lD~y~f~Gp~p~~vi~qY~~ltG~ 314 (946)
....|+||+|++++-|.++. ...+|.++.|++|.|+|+||+|.+|++||++|||+
T Consensus 274 ---~r~~g~fW~NAAeTWVDi~~~t~~~~~s~~~~~~~~s~~~p~~~thw~SEsGiiDvFi~lGP~~~Dv~~qyaaLTG~ 350 (915)
T KOG1066|consen 274 ---NRDVGIFWLNAAETWVDIQSSTTDGLFSKMVDPVSGSQKVPQTDTHWMSESGIIDVFIFLGPKPSDVFRQYAALTGT 350 (915)
T ss_pred ---CCceeeEEecchhheEEeeccccccccccccccCCCCCCCCCccceeeccCCcEEEEEEeCCChhHHHHHHHhhcCC
Confidence 46789999999986554421 14579999999999999999999999999999999
Q ss_pred CCCCCcccccceeccCCCCCHHHHHHHHHHHHHcCCCceEEEecCCCCCCceeeeeCCCCCCChhHHHHHHHHHHcCCEE
Q 002256 315 PAPMPYWSLGFHQCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDHMDGHKDFTLNPTNYPRPKLLAFLEKIHKIGMKY 394 (946)
Q Consensus 315 p~lpP~WalG~hq~r~gY~~~~~v~~vv~~~~~~~IPlD~iw~Didym~~~~~Ft~d~~~FP~p~l~~~v~~Lh~~g~k~ 394 (946)
|+|||.+|+|||||||+|+++++|.+|-++|.+++||+|+||+||+|.++++.||||+.+||+|+ +|+++|.+.|+|+
T Consensus 351 ~~LPplFsiGYHQcRWNY~DE~DV~~Vd~~FDehdiP~DviWLDIEhtdgKrYFTWDk~~FP~P~--~Ml~kLa~kgRkl 428 (915)
T KOG1066|consen 351 TPLPPLFSIGYHQCRWNYNDEEDVLTVDQGFDEHDIPYDVIWLDIEHTDGKRYFTWDKHKFPNPK--DMLKKLASKGRKL 428 (915)
T ss_pred CCCCchhhcchhhccccccchhhhhhhhcCccccCCccceEEEeeeecCCceeEeeccccCCCHH--HHHHHHHhcCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999998 9999999999999
Q ss_pred EEEeCCCCccCCCcHHhHhcccCcEEEe-eCCcceEEEecCCcccccCCCCHHHHHHHHHHHH--HhhccCCccEEEEeC
Q 002256 395 IVIIDPGIGVNSSYGVYQRGIANDVFIK-YEGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEIR--RFHELVPVDGLWIDM 471 (946)
Q Consensus 395 v~iidP~I~~~~~y~~y~~g~~~~~fik-~~g~~~~g~~WpG~~~~pDf~np~a~~ww~~~~~--~~~~~~g~dg~W~Dm 471 (946)
|+|+||||+.+++|..++++++++++|| .+|+.|.|.||||.+.||||+||++|+||++++. ++.....--.+|+||
T Consensus 429 V~IvDPHIKkD~~Y~v~ke~~~~gy~VKd~~G~DyeG~CWPG~S~yiDf~nP~~r~wW~~~fafd~y~g~t~nl~iWNDM 508 (915)
T KOG1066|consen 429 VTIVDPHIKKDDGYFVHKEAKDKGYYVKDRDGSDYEGWCWPGSSSYIDFINPEARKWWKSQFAFDRYEGSTPNLFIWNDM 508 (915)
T ss_pred EEEeCcccccCCCeEEhHHhhhCCeEEEecCCCcccccccCCCcccccccCHHHHHHHhhhcccccccCCCCceEEeccC
Confidence 9999999999999999999999999999 5899999999999999999999999999999875 343345556899999
Q ss_pred CCCcccCCCcccCCCCCCCCCCCCCCccccccCCCcccCCCCCCCcccccCCCccccccccccccccccCCccccccccc
Q 002256 472 NEASNFCSGLCKIPKGKQCPTGTGPGWVCCLDCKNITKTRWDDPPYKINASGLQVPIGFKTIATSAYHYNGVLEYDAHSI 551 (946)
Q Consensus 472 nEps~F~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ppy~~~~~g~~~~l~~~ti~~~~~h~~g~~~~~~HNl 551 (946)
||||+|... +-|++.|++||+|.+|+++||+
T Consensus 509 NEPSVFnGP-------------------------------------------------EiTm~kDaiHyGg~EHRdVHNi 539 (915)
T KOG1066|consen 509 NEPSVFNGP-------------------------------------------------EITMPKDAIHYGGWEHRDVHNI 539 (915)
T ss_pred CCccccCCC-------------------------------------------------ccccchhhhhcCCeeechhhhh
Confidence 999999762 3578899999999999999999
Q ss_pred hhhHHHHHHHHHHHhcc--CCCccEEeccccCCCCCceeeeCCCCCCChHHHHHhHHhhhcccccCCceeeccccccCCC
Q 002256 552 YGFSQSIATHKALLGLE--GKRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPA 629 (946)
Q Consensus 552 Yg~~~~~at~~~l~~~~--~kRpfilsRS~f~Gs~ry~~~WtGDn~s~W~~L~~sI~~~L~~~l~Gip~~G~DIgGF~g~ 629 (946)
||++...||++||+++. .+||||||||.|+|||||||.|||||.++|+|||-||||+|+.|++|+||+|||||||+||
T Consensus 540 YG~~~h~aT~dGl~~R~~g~~RPFvLsRafFaGsQR~aAiWTGDN~A~W~HLkiSiPM~Lsl~iaG~~F~GADVgGFFgN 619 (915)
T KOG1066|consen 540 YGLMVHMATFDGLIARSGGKERPFVLSRAFFAGSQRTAAIWTGDNTADWDHLKISIPMVLSLGIAGMPFVGADVGGFFGN 619 (915)
T ss_pred hceeeeehhhhhhhhhcCCCcCceEEEeccccCccceeeeeccCCccchhhheeecceeEecccccceecccccccccCC
Confidence 99999999999999875 4899999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHhccccceeccCCCCCCCCcccccchH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccCCC
Q 002256 630 PTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQWES-VAESARNALGMRYKLLPFLYTLNYEAHLSGAPIARPLFFSFP 708 (946)
Q Consensus 630 ~~~EL~~RW~QlgaF~Pf~R~H~~~~~~~qeP~~~~~-~~~~~r~ai~lRY~LLPYlYtl~~~a~~~G~Pv~RPL~~efP 708 (946)
|++||++||+|.|||+||||.|+++++++||||+|++ .++++|+||+.||+||||+||+||+++.+|.|||||||+|||
T Consensus 620 Pd~ELlvRWYQ~gaf~PFFRaHAHiDTkRREPWLf~e~~~~iiRdal~~RY~lLP~wYTlFye~~~tG~PvmrPl~~e~p 699 (915)
T KOG1066|consen 620 PDPELLVRWYQTGAFQPFFRAHAHIDTKRREPWLFPEQTTQIIRDALRTRYALLPYWYTLFYEHHVTGVPVMRPLFMEFP 699 (915)
T ss_pred CCHHHHHHHHHhcccchhhhhhccccccccCccccCcchHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccchhHhhCc
Confidence 9999999999999999999999999999999999975 789999999999999999999999999999999999999999
Q ss_pred CCcchhccCCeeeecCceeeeccccCCCeeEEEEcCCC---eeeeeccCceeEEccCCeEEEEeeCCceeeEEEeCCeEE
Q 002256 709 NYVECYNVSTQFLLGSSLMVSPVLEQGKSQVKALFPPG---SWYNVFDMTQAISSKDGKFVTLDAPLHVVNVHLYQNTIL 785 (946)
Q Consensus 709 ~D~~~~~i~~Qfm~G~~LLVaPVl~~g~t~~~vYlP~G---~Wyd~~t~~~~~~~~gG~~~~~~apl~~iPvfvR~GsIi 785 (946)
+|.+++.+|+|||+|+.|||-||+++|...++||||.| .|||+-++++ +.|++++.++|||+.||||.|||+||
T Consensus 700 eD~~~f~iD~Q~~vgsgLLVkPV~e~g~~~v~vylP~g~~evwyd~~s~~~---~~g~g~~~vpapl~~iPv~qrGGtIi 776 (915)
T KOG1066|consen 700 EDEELFEIDDQFMVGSGLLVKPVTEKGTSEVQVYLPRGKGEVWYDWVSGQE---YRGPGTVYVPAPLTSIPVFQRGGTII 776 (915)
T ss_pred cchhhhcccceEEEccccEEeecccCCcceeEEEcCCCCccEEEEcccCce---ecCCCcEEecCcccccceeeeCceec
Confidence 99999999999999999999999999999999999987 7999999965 34666999999999999999999999
Q ss_pred ecccC-CcchhhccCCceEEEEEccCCCCceeeEEEEEeeCCCCccccccCCcEEEEEEEEEEcCC-EEEEEEEEe--eC
Q 002256 786 PMQQG-GLISKEARMTPFSLVVTFPAGASGVQAKGKLYLDEDELPEMKLGNGYSTYVDFFATTGNG-TVKIWSEVQ--EG 861 (946)
Q Consensus 786 P~~~~-~~~t~~~~~~~~~l~v~~p~~~~~~~a~g~ly~DDG~s~~~~~~~g~~~~~~f~~~~~~~-~~~l~~~~~--~g 861 (946)
|+.+. ++++++++++|++|+||+ +.++.|+|+||+|||+|++| ++|+|.+.+|++..+.. .-+++.+.. +|
T Consensus 777 p~~~r~RRss~lm~~DP~tL~IAl---~~~~~A~G~lYlDDG~tf~Y--q~G~~~~~~F~f~~~~~~~~~l~~~~l~p~~ 851 (915)
T KOG1066|consen 777 PTKDRIRRSSELMKNDPITLFIAL---DSQGNANGELYLDDGETFNY--QRGQYVHRRFSFSNNSLNSASLVNENLDPEG 851 (915)
T ss_pred chHHHHHHhHHhhccCCeEEEEEe---CCCCcccceEEecCCccccc--ccccEEEEEEEeccCccccceecCCCCCccc
Confidence 99764 678889999999999999 77899999999999999998 69999999999975321 112332222 35
Q ss_pred cccCCCCcEEEEEEEEeecCCCCceEEEECCEEeccccceEEeccccccccccccccceEEEEEccCceecCCCEEEEE
Q 002256 862 KFALSKGWIIDSVTVLGLGGSGKASTLEINGSPTNANSKIEFNASEQKHLNSVEDEQKSVMVGIKGLGFPVGKNFVMSW 940 (946)
Q Consensus 862 ~y~~~~~~~~~~i~i~g~~~~p~~~~v~~ng~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~l~l~l~~~~~i~w 940 (946)
+|. ....|+||+|.|....|+...+..+|.+... .+|. ++ ..+.+++|+++++.+.++|+|.+
T Consensus 852 ~~~--~~~~IerIvI~G~~~~p~~~~i~~~~~~~~~---~~~~---------~d--~~~~~l~IrkPg~~v~~d~~v~i 914 (915)
T KOG1066|consen 852 KYA--TKNWIERIVIRGAESSPKIALITRIGSPVQS---LEFS---------HD--HDTKVLVIRKPGAFVTSDWKVHI 914 (915)
T ss_pred ccc--cccceEEEEEeccccCCcceEEeecCCCchh---ceec---------cc--CCCceEEEecCCceeeeeeEEEe
Confidence 554 4668999999999988877777888876643 2332 23 44678999999999999999975
No 2
>KOG1065 consensus Maltase glucoamylase and related hydrolases, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.8e-164 Score=1427.26 Aligned_cols=725 Identities=54% Similarity=0.926 Sum_probs=660.9
Q ss_pred CCCCCCeEEeEEEEeCCeEEEEEeec-ccCCCCCCCCceeEEEEEEEecCEEEEEEEeCCCCceecCccCCCCCCCCccc
Q 002256 53 TKIGKGYRLISIEEVDGGILGHLQVK-EKNNIYGPDIPLLQLYVKHETEDRLRVHITDAQKQRWEVPYNLLPREQPPKLK 131 (946)
Q Consensus 53 ~~~~~gY~v~~~~~~~~~~~a~L~~~-~~~~~~g~di~~L~l~v~~~~~~~lrvkI~d~~~~r~evP~~l~p~~~~~~~~ 131 (946)
-..|+||++.++.++..|++|.|++. ..++.||.|++.+.+.+.++|.+++||+|+|.+++|||+|...+++...
T Consensus 55 ~~~g~gY~~~~~~~~t~~~~a~l~~~~~~~~~~~~d~~~~~l~~~~~T~~r~~i~i~d~~~~r~e~p~~~~~~~~~---- 130 (805)
T KOG1065|consen 55 FLIGYGYQAESMQVSTSGQTAKLNNLDPSNPIYGTDIKSLLLTVSYETVERLHIKITDLNNQRWEVPHVTIRRVEG---- 130 (805)
T ss_pred eecCCceEEEecccccceEEEEeeccCCCcccccCCccceEeeeecccceeeEEeecCcCCCceecccccccceec----
Confidence 46689999999888877999999987 6788999999999999999999999999999999999999987665211
Q ss_pred cccccccCCCceeeecCCCeEEEEEEecCcEEEEEEecCCeEEEecCCCCCCCCCCceEeccEEEEEEecCCCceeeecC
Q 002256 132 QTIGRTRKNPIAVSDYSSNGLIFSYSADPFSFAVKRKSNGETLFNTSSDESDPFGPMVFKDQYLEISTKLPKDASLYGLG 211 (946)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~PF~f~v~r~s~g~vlf~t~~~~~~~~~~l~f~dq~l~~st~l~~~~~iYGlG 211 (946)
.. ..+. +..+.+||+|.|+|+++|++||+|+. ++|+|+|||+|++|.||++..+||+|
T Consensus 131 ----~s---------~~~~---~~~s~~pF~f~v~R~s~g~~lfdTs~------~~liF~DQflqlsT~LPs~~~iyG~g 188 (805)
T KOG1065|consen 131 ----RS---------HNSP---VSFSTGPFSFSVTRWSDGRVLFDTSI------GPLIFEDQFLQLSTYLPSENEIYGLG 188 (805)
T ss_pred ----cc---------cCCC---cccccCCeEEEEEEecCCceeeecCC------CceeeeeeeeeeeccCCCcccccccc
Confidence 00 0111 67788999999999999999999998 79999999999999999876699999
Q ss_pred CCCCCCCcccCCCCcEEeeeccCCCCCCCCCccceeeeEEEecCCCCCCceEEEEEecCCceeEEEe-CCeEEEEEEccE
Q 002256 212 ENTQPHGIKLYPNDPYTLYTTDVSAINLNTDLYGSHPVYMDLRNVNGEGAAHGVLLLSSNGMDVFYK-GTSLTYKIIGGV 290 (946)
Q Consensus 212 E~~~~~~~~l~~~~~~~l~n~D~~~~~~~~~lYgs~Pf~~~~~~~~~~g~~~Gvf~~Ns~~~dv~~~-~~~~~~~~~gG~ 290 (946)
||.+....++-++.+++||++|..+...+.||||+|||||+++.. +.+||||++|||+|||.++ .+.++||++||+
T Consensus 189 E~~~~~~~~~~~~~t~~l~~rd~~p~~~~~NLYGshPfymcle~~---~~~~GVflLnSNamEv~~~p~p~L~YR~iGGi 265 (805)
T KOG1065|consen 189 EHTHQSYRHDMNNLTWTLFARDYSPNLPGVNLYGSHPFYLCLEDD---SGAHGVFLLNSNAMEVTLRPGPSLTYRTIGGI 265 (805)
T ss_pred cccchhhhcccCCceeeeeecccCCCCCcccccccccceeEeecc---CCCceEEEeccCCceEEeccCCeeEEEeecce
Confidence 999865345567899999999998866789999999999999986 7889999999999999999 599999999999
Q ss_pred EEEEEEeCCChHHHHHHHHhhcCCCCCCCcccccceeccCCCCCHHHHHHHHHHHHHcCCCceEEEecCCCCCCceeeee
Q 002256 291 FDFYFFAGPSPLAVVDQYTAFIGRPAPMPYWSLGFHQCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDHMDGHKDFTL 370 (946)
Q Consensus 291 lD~y~f~Gp~p~~vi~qY~~ltG~p~lpP~WalG~hq~r~gY~~~~~v~~vv~~~~~~~IPlD~iw~Didym~~~~~Ft~ 370 (946)
+|+|+|+||+|+.|++||.++||+|+|||+|+||||+|||||++.+++++++++++++|||+|++|+|||||++++|||+
T Consensus 266 lD~y~flGptPe~vvqQy~q~iG~P~m~pYWslGf~~~RwgY~nls~~~dvv~~~~~agiPld~~~~DiDyMd~ykDFTv 345 (805)
T KOG1065|consen 266 LDFYVFLGPTPEGVVQQYLQLIGRPAMPPYWSLGFQLCRWGYKNLSVVRDVVENYRAAGIPLDVIVIDIDYMDGYKDFTV 345 (805)
T ss_pred EEEEEecCCChHHHHHHHHHHhCCccCCchhhccceecccccccHHHHHHHHHHHHHcCCCcceeeeehhhhhcccceee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCChhHHHHHHHHHHcCCEEEEEeCCCCccCCCcHHhHhcccCcEEEee-CCcc-eEEEecCCcccccCCCCHHHH
Q 002256 371 NPTNYPRPKLLAFLEKIHKIGMKYIVIIDPGIGVNSSYGVYQRGIANDVFIKY-EGEP-YLAQVWPGAVNFPDFLNPKTV 448 (946)
Q Consensus 371 d~~~FP~p~l~~~v~~Lh~~g~k~v~iidP~I~~~~~y~~y~~g~~~~~fik~-~g~~-~~g~~WpG~~~~pDf~np~a~ 448 (946)
|+.+||. +++|+++||++|+|+|+|+||+|+.+..|..|++|.++++||+. +|++ ++|++|||.++||||+||++.
T Consensus 346 d~~~fp~--~~~fv~~Lh~~G~kyvliidP~is~~~~y~~y~~g~~~~v~I~~~~g~~~~lg~vwP~~~~fpDftnp~~~ 423 (805)
T KOG1065|consen 346 DKVWFPD--LKDFVDDLHARGFKYVLIIDPFISTNSSYGPYDRGVAKDVLIKNREGSPKMLGEVWPGSTAFPDFTNPAVV 423 (805)
T ss_pred ccccCcc--hHHHHHHHHhCCCeEEEEeCCccccCccchhhhhhhhhceeeecccCchhhhcccCCCcccccccCCchHH
Confidence 9999997 78999999999999999999999999889999999999999994 8988 999999999999999999999
Q ss_pred HHHHHHHHHhhccCCccEEEEeCCCCcccCCCcccCCCCCCCCCCCCCCccccccCCCcccCCCCCCCcccccCCCcccc
Q 002256 449 SWWGDEIRRFHELVPVDGLWIDMNEASNFCSGLCKIPKGKQCPTGTGPGWVCCLDCKNITKTRWDDPPYKINASGLQVPI 528 (946)
Q Consensus 449 ~ww~~~~~~~~~~~g~dg~W~DmnEps~F~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ppy~~~~~g~~~~l 528 (946)
+||.++++.|++.+++||+|+||||+++|+.. | ++.......+
T Consensus 424 ~Ww~~~~~~fh~~vp~dg~wiDmnE~snf~~p-----------------------------------p--~~~~~~~~~~ 466 (805)
T KOG1065|consen 424 EWWLDELKRFHDEVPFDGFWIDMNEPSNFPSP-----------------------------------P--INPTLDNGDL 466 (805)
T ss_pred HHHHHHHHhhcccCCccceEEECCCcccCCCC-----------------------------------C--cccccccccc
Confidence 99999999999999999999999999999752 1 1222222233
Q ss_pred ccccccccccccCCccccccccchhhHHHHHHHHHHHhccCCCccEEeccccCCCCCceeeeCCCCCCChHHHHHhHHhh
Q 002256 529 GFKTIATSAYHYNGVLEYDAHSIYGFSQSIATHKALLGLEGKRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTM 608 (946)
Q Consensus 529 ~~~ti~~~~~h~~g~~~~~~HNlYg~~~~~at~~~l~~~~~kRpfilsRS~f~Gs~ry~~~WtGDn~s~W~~L~~sI~~~ 608 (946)
..+| |+.||+||+.+++|+++++.+.++||+||++||+|+|++||++||+|||.++|++|+.+|++|
T Consensus 467 ~~~t-------------yd~~~lyg~~~aiat~~a~~~v~~kr~~i~srsTf~g~g~y~~hwlgdn~~~w~~L~~sI~gm 533 (805)
T KOG1065|consen 467 YAKT-------------YDTHNLYGYSEAIATHQALVDVPGKRSFILSRSTFVGSGRYAGHWLGDNTARWEDLQTSISGM 533 (805)
T ss_pred cccc-------------hhhhhhHhHHHhhhhhccceeccccccccccccceecccccceeecccccceehhccccchhh
Confidence 3333 789999999999999999999889999999999999999999999999999999999999999
Q ss_pred hcccccCCceeeccccccCCCCChhHHHHHHHhccccceeccCCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHH
Q 002256 609 LNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQWESVAESARNALGMRYKLLPFLYTL 688 (946)
Q Consensus 609 L~~~l~Gip~~G~DIgGF~g~~~~EL~~RW~QlgaF~Pf~R~H~~~~~~~qeP~~~~~~~~~~r~ai~lRY~LLPYlYtl 688 (946)
|+|+|+||||+|+|||||.|.++||||.||+|+|||+||||+|+..+..+|||+.|+++++++|+++.+||++|||+||+
T Consensus 534 l~fnl~Gip~Vg~Dicgf~~~~~eELc~RW~q~gaF~Pf~R~hn~~~~~~qe~~~~~sv~~a~r~~~~~ry~~lP~lytl 613 (805)
T KOG1065|consen 534 LEFNLFGIPMVGSDICGFLGPPTEELCLRWLQLGAFYPFSRNHNSPGEPRQEPYTWSSVAEAARNALTLRYTLLPYLYTL 613 (805)
T ss_pred hcccccCCCccchhhhcCCCCCCHHHHHHHHHhccCCchhhccCCCCCcccChhhHHHHHHHHHHhhhheeeehhhHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCcccccccCCCCCcchhccCCeeeecCceeeeccccCCCeeEEEEcCCCeeeeeccCceeEEccCCe-EEE
Q 002256 689 NYEAHLSGAPIARPLFFSFPNYVECYNVSTQFLLGSSLMVSPVLEQGKSQVKALFPPGSWYNVFDMTQAISSKDGK-FVT 767 (946)
Q Consensus 689 ~~~a~~~G~Pv~RPL~~efP~D~~~~~i~~Qfm~G~~LLVaPVl~~g~t~~~vYlP~G~Wyd~~t~~~~~~~~gG~-~~~ 767 (946)
+++||..|+||+||||++||+|++|+.+++|||||++|||||||++|+++|++|||.|.|||+++++.. .+++ .++
T Consensus 614 ~~~A~~sG~pV~RPlf~~fP~D~~~~~v~~qFl~G~~llvaPvl~~g~~~v~~y~P~g~Wyd~~~~~~~---~~~~~~~~ 690 (805)
T KOG1065|consen 614 FYRAHVSGEPVARPLFFEFPTDPATLIVSDQFLWGESLLVAPVLYQGATEVEAYLPQGVWYDGFDGSYR---VGSKWMVT 690 (805)
T ss_pred hhhhhhcCCcceeeeeeecCCChhhhcccceeEeccccccccchhcCceEEEEEccCceeeecCCcceE---eeeecccc
Confidence 999999999999999999999999999999999999999999999999999999999999999998642 2333 567
Q ss_pred EeeCCceeeEEEeCCeEEecccCCcchhhccCCceEEEEEccCCCCceeeEEEEEeeCCCCccccccCCcEEEEEEEEEE
Q 002256 768 LDAPLHVVNVHLYQNTILPMQQGGLISKEARMTPFSLVVTFPAGASGVQAKGKLYLDEDELPEMKLGNGYSTYVDFFATT 847 (946)
Q Consensus 768 ~~apl~~iPvfvR~GsIiP~~~~~~~t~~~~~~~~~l~v~~p~~~~~~~a~g~ly~DDG~s~~~~~~~g~~~~~~f~~~~ 847 (946)
+.+|+++||+|+|+|.|||+|. +.|+||+ +.++ |+|+||+|||++.. .++.++ |.+..
T Consensus 691 ~~~p~d~i~v~~r~g~ilp~q~------------~~l~~a~---~~~~-a~g~l~~ddge~~~---~~~~~~---f~~~~ 748 (805)
T KOG1065|consen 691 YAAPLDKIPVFLRGGYILPMQQ------------FELLVAL---DENG-ASGELYWDDGETLE---AGGGYS---FSFSS 748 (805)
T ss_pred cCCchhhccchhccCceeeecc------------cceeeee---ccCC-cceeeecCCCcchh---cCCCcE---EEEee
Confidence 8999999999999999999997 7788987 6778 99999999999987 355554 66653
Q ss_pred cCCEEEEEEEEeeCcccCCCCcEEEEEEEEeecCCCCceEEEECCEEe
Q 002256 848 GNGTVKIWSEVQEGKFALSKGWIIDSVTVLGLGGSGKASTLEINGSPT 895 (946)
Q Consensus 848 ~~~~~~l~~~~~~g~y~~~~~~~~~~i~i~g~~~~p~~~~v~~ng~~~ 895 (946)
.+.+.+.++.|+.. .+++|+|+| |..++|++||+++
T Consensus 749 -----~~~~~~~~~~~~~~---~~~~v~ilg----~~~~~~~~ng~~~ 784 (805)
T KOG1065|consen 749 -----TLLSNVKEGKYAES---TLDKVTILG----PNFSSFTLNGSPV 784 (805)
T ss_pred -----eeEEEeeccccccc---cceEEEEec----CCcceEEECCeEE
Confidence 25566778888754 788999999 3458999999988
No 3
>PLN02763 hydrolase, hydrolyzing O-glycosyl compounds
Probab=100.00 E-value=2.2e-144 Score=1309.02 Aligned_cols=595 Identities=33% Similarity=0.608 Sum_probs=536.8
Q ss_pred ccEEEEEEecCCCceeeecCCCCCCCCcccCCCCcEEeeeccCCCCCC-CCCccceeeeEEEecCCCCCCceEEEEEecC
Q 002256 192 DQYLEISTKLPKDASLYGLGENTQPHGIKLYPNDPYTLYTTDVSAINL-NTDLYGSHPVYMDLRNVNGEGAAHGVLLLSS 270 (946)
Q Consensus 192 dq~l~~st~l~~~~~iYGlGE~~~~~~~~l~~~~~~~l~n~D~~~~~~-~~~lYgs~Pf~~~~~~~~~~g~~~Gvf~~Ns 270 (946)
+....++++|++++++|||||++++ + .++|++++|||+|...++. ..+||++|||||+++.. +.+||||++|+
T Consensus 61 ~~~~~~~~~l~~~e~~YGlGE~~g~--L-~rrG~~~~lwN~D~~gy~~~~~~LY~siPf~l~~~~~---g~~yGVf~dns 134 (978)
T PLN02763 61 GDQQIVTFELPSGTSFYGTGEVSGP--L-ERTGKRVYTWNTDAWGYGQNTTSLYQSHPWVFVVLPN---GEALGVLADTT 134 (978)
T ss_pred CCEEEEEEEcCCCCeEEeCCccCCc--c-ccCCcEEEEEECCCCccCCCCCcccccEeEEEEEecC---CcEEEEEEeCC
Confidence 3444567888999999999999874 3 4679999999999876654 46899999999998764 67899999999
Q ss_pred CceeEEEeC-CeEEEEEEccEEEEEEE-eC--CChHHHHHHHHhhcCCCCCCCcccccceeccCCCCCHHHHHHHHHHHH
Q 002256 271 NGMDVFYKG-TSLTYKIIGGVFDFYFF-AG--PSPLAVVDQYTAFIGRPAPMPYWSLGFHQCRWGYHNLSVVEDVVENYK 346 (946)
Q Consensus 271 ~~~dv~~~~-~~~~~~~~gG~lD~y~f-~G--p~p~~vi~qY~~ltG~p~lpP~WalG~hq~r~gY~~~~~v~~vv~~~~ 346 (946)
+.+++.++. ..+.|.+.+ |+|++ .| |+|++|+++|++|||+|+|||+||||||||||+|+++++|++++++||
T Consensus 135 ~~~~fDlg~~~~~~f~a~~---~y~~i~~G~gptp~eVi~~Yt~LTGrp~mpP~WALGy~qSR~~Y~sq~eV~eva~~fr 211 (978)
T PLN02763 135 RRCEIDLRKESIIRIIAPA---SYPVITFGPFPSPEALLTSLSHAIGTVFMPPKWALGYQQCRWSYESAKRVAEIARTFR 211 (978)
T ss_pred CcEEEEEcCCceEEEEecC---ceEEEEecCCCCHHHHHHHHHHHhCCCCCCchHHhheeeccCCCCCHHHHHHHHHHHH
Confidence 999998875 445666643 77765 46 799999999999999999999999999999999999999999999999
Q ss_pred HcCCCceEEEecCCCCCCceeeeeCCCCCCChhHHHHHHHHHHcCCEEEEEeCCCCccCCCcHHhHhcccCcEEEe-eCC
Q 002256 347 KAKIPLDVIWNDDDHMDGHKDFTLNPTNYPRPKLLAFLEKIHKIGMKYIVIIDPGIGVNSSYGVYQRGIANDVFIK-YEG 425 (946)
Q Consensus 347 ~~~IPlD~iw~Didym~~~~~Ft~d~~~FP~p~l~~~v~~Lh~~g~k~v~iidP~I~~~~~y~~y~~g~~~~~fik-~~g 425 (946)
+++||||+||+|||||+++++||||+++||+|+ +|+++||++|+|+|+|+||+|+.+++|..|++|+++++||| .+|
T Consensus 212 e~~IP~DvIwlDidYm~g~~~FTwD~~rFPdP~--~mv~~Lh~~G~kvv~iidPgI~~d~gY~~y~eg~~~~~fvk~~~G 289 (978)
T PLN02763 212 EKKIPCDVVWMDIDYMDGFRCFTFDKERFPDPK--GLADDLHSIGFKAIWMLDPGIKAEEGYFVYDSGCENDVWIQTADG 289 (978)
T ss_pred HcCCCceEEEEehhhhcCCCceeECcccCCCHH--HHHHHHHHCCCEEEEEEcCCCccCCCCHHHHhHhhcCeeEECCCC
Confidence 999999999999999999999999999999987 99999999999999999999998889999999999999999 579
Q ss_pred cceEEEecCCcccccCCCCHHHHHHHHHHHHHhhccCCccEEEEeCCCCcccCCCcccCCCCCCCCCCCCCCccccccCC
Q 002256 426 EPYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHELVPVDGLWIDMNEASNFCSGLCKIPKGKQCPTGTGPGWVCCLDCK 505 (946)
Q Consensus 426 ~~~~g~~WpG~~~~pDf~np~a~~ww~~~~~~~~~~~g~dg~W~DmnEps~F~~g~~~~~~~~~~p~~~~~~~~~~~~~~ 505 (946)
++|+|.||||.++|||||||+|++||.++++.+.+ .|+||||+|||||++|+...+
T Consensus 290 ~~y~G~vWpG~~~fpDFTnP~ar~WW~~~~k~l~d-~GVDG~W~DmnEPa~f~~~~~----------------------- 345 (978)
T PLN02763 290 KPFVGEVWPGPCVFPDFTNKKTRSWWANLVKDFVS-NGVDGIWNDMNEPAVFKTVTK----------------------- 345 (978)
T ss_pred CeeEeeecCCCccccCCCCHHHHHHHHHHHHHHhc-CCCcEEEccCCCCccccCCcC-----------------------
Confidence 99999999999999999999999999999998886 799999999999999975321
Q ss_pred CcccCCCCCCCcccccCCCccccccccccccccccC-----C-ccccccccchhhHHHHHHHHHHHhc-cCCCccEEecc
Q 002256 506 NITKTRWDDPPYKINASGLQVPIGFKTIATSAYHYN-----G-VLEYDAHSIYGFSQSIATHKALLGL-EGKRPFILSRS 578 (946)
Q Consensus 506 ~~~~~~~~~ppy~~~~~g~~~~l~~~ti~~~~~h~~-----g-~~~~~~HNlYg~~~~~at~~~l~~~-~~kRpfilsRS 578 (946)
|+|.++.|.+ | ..|+++||+||+++++|+++|+++. +++||||||||
T Consensus 346 --------------------------t~P~~~~h~g~~~~gG~~~h~~~HNlYgll~akatyEgl~~~~~~kRPFilTRS 399 (978)
T PLN02763 346 --------------------------TMPETNIHRGDEELGGVQNHSHYHNVYGMLMARSTYEGMLLANKNKRPFVLTRA 399 (978)
T ss_pred --------------------------CCCccccccCCcccCCccCHHHHhhhhHHHHHHHHHHHHHHhCCCCCcEEEEcc
Confidence 2222333332 1 2588999999999999999999865 58999999999
Q ss_pred ccCCCCCceeeeCCCCCCChHHHHHhHHhhhcccccCCceeeccccccCCCCChhHHHHHHHhccccceeccCCCCCCCC
Q 002256 579 TFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDHANYYSPR 658 (946)
Q Consensus 579 ~f~Gs~ry~~~WtGDn~s~W~~L~~sI~~~L~~~l~Gip~~G~DIgGF~g~~~~EL~~RW~QlgaF~Pf~R~H~~~~~~~ 658 (946)
+|+|+|||+++|+|||.|+|++|+.+|+++|++||+|+||||+|||||.|++++|||+||+|+|||+||||+|+..++.+
T Consensus 400 gfaGsQRYaa~WtGDn~SsWe~L~~sI~~~LnlgLSGipf~G~DIGGF~G~~~~ELy~RW~Q~GaF~P~fR~Hs~~gt~~ 479 (978)
T PLN02763 400 GFIGSQRYAATWTGDNLSNWEHLHMSIPMVLQLGLSGQPLSGPDIGGFAGDATPKLFGRWMGVGAMFPFARGHSEQGTID 479 (978)
T ss_pred ccCcCCCCceEECCCccCCHHHHHHHHHHHHHHHhcCCcccccccCCCCCCCCHHHHHHHHHHhhhhHHhhhccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998899
Q ss_pred cccccc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccCCCCCcchhccCCeeeecCceeeecc-ccCCC
Q 002256 659 QELYQW-ESVAESARNALGMRYKLLPFLYTLNYEAHLSGAPIARPLFFSFPNYVECYNVSTQFLLGSSLMVSPV-LEQGK 736 (946)
Q Consensus 659 qeP~~~-~~~~~~~r~ai~lRY~LLPYlYtl~~~a~~~G~Pv~RPL~~efP~D~~~~~i~~Qfm~G~~LLVaPV-l~~g~ 736 (946)
||||.| +++.+++|++|++||+|||||||++++||++|.||||||||+||+|++++++++|||+|++|||||| +++++
T Consensus 480 qEPW~fgeev~~i~R~ai~LRYrLLPYiYSL~~eA~~tG~PImRPL~~efP~D~~a~~iddQFM~G~~LLVAPVv~~~g~ 559 (978)
T PLN02763 480 HEPWSFGEECEEVCRLALKRRYRLLPHFYTLFYKAHTTGLPVMTPIFFADPKDPSLRKVENSFLLGPLLISASTLPDQGS 559 (978)
T ss_pred cCCeecChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceeeceecCCCCChHHhccCceEEEcCCeEEcceeccCCc
Confidence 999999 4688999999999999999999999999999999999999999999999999999999999999998 58899
Q ss_pred eeEEEEcCCCeeeeeccCceeEEccCCeEEEEeeCCceeeEEEeCCeEEecccCCcchhhc-cCCceEEEEEccCCCCce
Q 002256 737 SQVKALFPPGSWYNVFDMTQAISSKDGKFVTLDAPLHVVNVHLYQNTILPMQQGGLISKEA-RMTPFSLVVTFPAGASGV 815 (946)
Q Consensus 737 t~~~vYlP~G~Wyd~~t~~~~~~~~gG~~~~~~apl~~iPvfvR~GsIiP~~~~~~~t~~~-~~~~~~l~v~~p~~~~~~ 815 (946)
++|+||||+|.||||++++. .. +.+|||||+|+|||++++.+++.+. +.++++|+|++ +.++
T Consensus 560 tsr~VYLP~G~WyDf~t~~~---~~-----------~~pplfVR~GsIIPl~~~~~~~~e~~~~~~l~L~V~~---~~~g 622 (978)
T PLN02763 560 DNLQHVLPKGIWQRFDFDDS---HP-----------DLPLLYLQGGSIIPLGPPIQHVGEASLSDDLTLLIAL---DENG 622 (978)
T ss_pred eEEEEECCCCcEEecCCCCc---cc-----------CCccEEEeCCEEEEeccccccccccccCCceEEEEcc---CCCC
Confidence 99999999999999998631 10 3457999999999999988877664 56899999986 5678
Q ss_pred eeEEEEEeeCCCCccccccCCcEEEEEEEEEEcCCEEEEEEEEeeCcccCC
Q 002256 816 QAKGKLYLDEDELPEMKLGNGYSTYVDFFATTGNGTVKIWSEVQEGKFALS 866 (946)
Q Consensus 816 ~a~g~ly~DDG~s~~~~~~~g~~~~~~f~~~~~~~~~~l~~~~~~g~y~~~ 866 (946)
+|+|+||+|||+|++| ++|+|..++|++...++.+++++...+|+|...
T Consensus 623 ~a~g~LYeDDG~s~~Y--e~G~y~~~~f~~~~~~~~~~i~i~~~~G~y~~~ 671 (978)
T PLN02763 623 KAEGVLYEDDGDGFGY--TKGDYLLTHYEAELVSSEVTVRVASTEGSWKRP 671 (978)
T ss_pred cEEEEEEEcCCCcccc--cCCcEEEEEEEEEeCCCEEEEEEcccCCCCCCc
Confidence 9999999999999987 699999999999887778888888889999753
No 4
>COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.1e-133 Score=1204.96 Aligned_cols=617 Identities=33% Similarity=0.612 Sum_probs=551.7
Q ss_pred CCCeEEEEEEecCcEEEEEEecCCeEEEecCCCCCCCCCCceEeccEEEEEEecCCCceeeecCCCCCCCCcccCCCCcE
Q 002256 148 SSNGLIFSYSADPFSFAVKRKSNGETLFNTSSDESDPFGPMVFKDQYLEISTKLPKDASLYGLGENTQPHGIKLYPNDPY 227 (946)
Q Consensus 148 ~~~~l~~~~~~~PF~f~v~r~s~g~vlf~t~~~~~~~~~~l~f~dq~l~~st~l~~~~~iYGlGE~~~~~~~~l~~~~~~ 227 (946)
....+.+.+.+++..+.+........+.++.. .++++...+++..++++||||||+.+ + .+.++++
T Consensus 107 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~e~~yGlge~~~~--l-~~~~~~~ 172 (772)
T COG1501 107 KTGNLLLEFSKNDEGITREDLRGRAELEDTFG-----------GGGYVFLYFDLGGGEHVYGLGERAGG--L-GRNGQTY 172 (772)
T ss_pred ccCceeeEEecCCCcEEEEecCccceeeeccC-----------CCccEEEEEEecCCceEeeccccccc--c-ccCcceE
Confidence 34566667777776666655443344443321 45677888889899999999999984 3 4667899
Q ss_pred EeeeccCCCCCC--CCCccceeeeEEEecCCCCCCceEEEEEecCCceeEEEeC---CeEEEEEEccEEEEEEEeCCChH
Q 002256 228 TLYTTDVSAINL--NTDLYGSHPVYMDLRNVNGEGAAHGVLLLSSNGMDVFYKG---TSLTYKIIGGVFDFYFFAGPSPL 302 (946)
Q Consensus 228 ~l~n~D~~~~~~--~~~lYgs~Pf~~~~~~~~~~g~~~Gvf~~Ns~~~dv~~~~---~~~~~~~~gG~lD~y~f~Gp~p~ 302 (946)
++||.|...+.. ..++|.++||+++.++ +|+|+.|+....+.++. ....|.+++|.||+||++||+++
T Consensus 173 ~~wn~D~~~~~~~~~~~~y~~iPf~~s~~g-------yg~~~~n~~~~~fd~~~~~~~~~~~~~e~~~ldyyv~~G~~~~ 245 (772)
T COG1501 173 RLWNADAGTYTGGDYDNLYASIPFYLSSRG-------YGLFVDNSAYGSFDVGSEEYSYVQFSVEGGQLDYYVIAGPTPK 245 (772)
T ss_pred EeeecCCCcccccccccccccCCEEEEccc-------eEEEEECCCceEEEcCCcceEEEEEEecCCcEEEEEEeCCCHH
Confidence 999999987643 3799999999999854 79999999998887765 45567788899999999999999
Q ss_pred HHHHHHHhhcCCCCCCCccccc-ceeccCCCCCHHHHHHHHHHHHHcCCCceEEEecCC-CCCCceeeeeCCCCCCChhH
Q 002256 303 AVVDQYTAFIGRPAPMPYWSLG-FHQCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDD-HMDGHKDFTLNPTNYPRPKL 380 (946)
Q Consensus 303 ~vi~qY~~ltG~p~lpP~WalG-~hq~r~gY~~~~~v~~vv~~~~~~~IPlD~iw~Did-ym~~~~~Ft~d~~~FP~p~l 380 (946)
+|+++|++|||||+|||+|||| +|+||+.|.++++|.++++.+++++||+|+||+|+| ||+++++||||+.+||+|+
T Consensus 246 ~vi~~yt~lTGkp~l~P~Wa~G~~~~~~~~~~~e~~v~~~i~~~~~~~IP~d~~~lD~~~~~~~~~~F~wd~~~FP~pk- 324 (772)
T COG1501 246 DVLEKYTDLTGKPPLPPKWALGWLWTSRYTYYDEDEVLEFIDEMRERDIPLDVFVLDIDFWMDNWGDFTWDPDRFPDPK- 324 (772)
T ss_pred HHHHHHHHhhCCCCCCCceecCCCceeccccccHHHHHHHHhhcccccCcceEEEEeehhhhccccceEECcccCCCHH-
Confidence 9999999999999999999999 999999999999999999999999999999999998 9999999999999999998
Q ss_pred HHHHHHHHHcCCEEEEEeCCCCccCCCcHHhHhcccCcEEEe-eCCcceEEEecCCcccccCCCCHHHHHHHHHHHHHhh
Q 002256 381 LAFLEKIHKIGMKYIVIIDPGIGVNSSYGVYQRGIANDVFIK-YEGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFH 459 (946)
Q Consensus 381 ~~~v~~Lh~~g~k~v~iidP~I~~~~~y~~y~~g~~~~~fik-~~g~~~~g~~WpG~~~~pDf~np~a~~ww~~~~~~~~ 459 (946)
+|+++||++|+|+++||+|+|+.+. +.|++++++|+|+| .+|.++.+.+|||.+++||||||++++||++...+.+
T Consensus 325 -~mi~~l~~~Gikl~~~i~P~i~~d~--~~~~e~~~~Gy~~k~~~g~~~~~~~w~~~~a~~DFtnp~~r~Ww~~~~~~~l 401 (772)
T COG1501 325 -QMIAELHEKGIKLIVIINPYIKQDS--PLFKEAIEKGYFVKDPDGEIYQADFWPGNSAFPDFTNPDAREWWASDKKKNL 401 (772)
T ss_pred -HHHHHHHhcCceEEEEeccccccCC--chHHHHHHCCeEEECCCCCEeeecccCCcccccCCCCHHHHHHHHHHHHhHH
Confidence 9999999999999999999999764 89999999999999 4799999999999999999999999999996444444
Q ss_pred ccCCccEEEEeCCCCcccCCCcccCCCCCCCCCCCCCCccccccCCCcccCCCCCCCcccccCCCccccccccccccccc
Q 002256 460 ELVPVDGLWIDMNEASNFCSGLCKIPKGKQCPTGTGPGWVCCLDCKNITKTRWDDPPYKINASGLQVPIGFKTIATSAYH 539 (946)
Q Consensus 460 ~~~g~dg~W~DmnEps~F~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ppy~~~~~g~~~~l~~~ti~~~~~h 539 (946)
.++|+||||+|||||+.|+.. .+
T Consensus 402 ~d~Gv~g~W~D~nEp~~~~~~---------------------------------------------------------~~ 424 (772)
T COG1501 402 LDLGVDGFWNDMNEPEPFDGD---------------------------------------------------------GF 424 (772)
T ss_pred HhcCccEEEccCCCCcccccc---------------------------------------------------------cc
Confidence 568999999999999876530 34
Q ss_pred cCCccccccccchhhHHHHHHHHHHHhc-cCCCccEEeccccCCCCCceeeeCCCCCCChHHHHHhHHhhhcccccCCce
Q 002256 540 YNGVLEYDAHSIYGFSQSIATHKALLGL-EGKRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPM 618 (946)
Q Consensus 540 ~~g~~~~~~HNlYg~~~~~at~~~l~~~-~~kRpfilsRS~f~Gs~ry~~~WtGDn~s~W~~L~~sI~~~L~~~l~Gip~ 618 (946)
++|..++++||+|++++++|+++|+++. +++|||+||||+|+|+|||+++|+|||.++|++||.||+++|++||+|+||
T Consensus 425 ~~g~~~~~~~N~yp~~~~~a~~~~~~~~~~~~r~~~lsRsg~aG~Q~~~~~WsGD~~s~wd~l~~si~~~Ls~~~sGi~~ 504 (772)
T COG1501 425 GNGIDHEEMHNLYPLLYAKAVYEALKELGGNERPFILSRSGYAGSQRYAAHWSGDNRSSWDSLRESIPAGLSLSLSGIPF 504 (772)
T ss_pred ccccCHHHHhcchhHHHHHHHHHHHHhhcCCCceEEEEecccccceeccceeCCccccchHHHHhhHHhhhchhccCCcc
Confidence 5677889999999999999999999998 689999999999999999999999999999999999999999999999999
Q ss_pred eeccccccCC--CCChhHHHHHHHhccccceeccCCCCCCCCcccccch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 002256 619 VGSDICGFYP--APTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQWE-SVAESARNALGMRYKLLPFLYTLNYEAHLS 695 (946)
Q Consensus 619 ~G~DIgGF~g--~~~~EL~~RW~QlgaF~Pf~R~H~~~~~~~qeP~~~~-~~~~~~r~ai~lRY~LLPYlYtl~~~a~~~ 695 (946)
||+|||||.| .+++|||+||+|+|+|+|+||.|++ ++.+||||.|+ ++.+++|+++++||+|||||||++++|+++
T Consensus 505 wg~DiGGF~g~~~~~~EL~~RW~q~g~F~P~~R~H~~-d~~~rePW~~~e~~~~i~r~~~~lR~~LlPYiYt~~~~a~~t 583 (772)
T COG1501 505 WGHDIGGFTGGDDPTAELYIRWYQFGAFSPIFRLHGN-DNIPREPWAFGEETEEIVREYIQLRYRLLPYIYTLAAEASET 583 (772)
T ss_pred ccccccccCCCCCCCHHHHHHHHHHHhcCchhhhhCC-CCCCCCCccCChhHHHHHHHHHHHHHccchHHHHHHHHHhcc
Confidence 9999999999 7999999999999999999999998 77899999997 578999999999999999999999999999
Q ss_pred CCCcccccccCCCCCcchhccCCeeeecCceeeeccccCCCeeEEEEcCCCeeeeeccCceeEEccCCeEEEEeeCCcee
Q 002256 696 GAPIARPLFFSFPNYVECYNVSTQFLLGSSLMVSPVLEQGKSQVKALFPPGSWYNVFDMTQAISSKDGKFVTLDAPLHVV 775 (946)
Q Consensus 696 G~Pv~RPL~~efP~D~~~~~i~~Qfm~G~~LLVaPVl~~g~t~~~vYlP~G~Wyd~~t~~~~~~~~gG~~~~~~apl~~i 775 (946)
|.|||||||++||+|+.++++++|||+|++||||||+++|+++|+||||+|+|||+||++. ++||+++++.||+++|
T Consensus 584 G~P~mRplf~~fp~D~~~~~iddqym~G~~lLVAPV~~eg~~~r~vyLP~g~W~d~~tg~~---~~Gg~~i~~~apl~~i 660 (772)
T COG1501 584 GLPMMRPLFLEFPEDETTYNLDDQYMFGDDLLVAPVVEEGQTSREVYLPEGTWYDFWTGEE---YEGGQTITVEAPLETI 660 (772)
T ss_pred CCcceehhheeCCCChhhhhcccceecccceEEeeccccCcceEEEECCCceEEEccCCCE---EeCCeeEEEecCccCC
Confidence 9999999999999999999999999999999999999999999999999999999999965 4699999999999999
Q ss_pred eEEEeCCeEEecccCCcchhhccCCceEEEEEccCCCCceeeEEEEEeeCCCCccccccCCcEEEEEEEEEEcCCEEEEE
Q 002256 776 NVHLYQNTILPMQQGGLISKEARMTPFSLVVTFPAGASGVQAKGKLYLDEDELPEMKLGNGYSTYVDFFATTGNGTVKIW 855 (946)
Q Consensus 776 PvfvR~GsIiP~~~~~~~t~~~~~~~~~l~v~~p~~~~~~~a~g~ly~DDG~s~~~~~~~g~~~~~~f~~~~~~~~~~l~ 855 (946)
|||||+|+|||++...+.+.....++..+.|+. ..++ |++.+|.|||++..+ ++|++...+++++.......++
T Consensus 661 PvfvR~Gsiip~~~~~~~~~~~~~~~~~~~v~~---~~~~-~~~~~y~ddG~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 734 (772)
T COG1501 661 PVFVRAGSIIPLLENELYVGESYVEDVAFDVFP---GQDG-ASGELYDDDGESFAY--EKGEYTDSKITVSNTKHGVEVT 734 (772)
T ss_pred ceEEecCceeecccchhhccccccCCceEEEEe---ccCC-ceEEEEccCCeEEEE--EeeeeecceEEEEcccceeEEE
Confidence 999999999999998888877777788888864 3344 999999999999887 6899988888887554444444
Q ss_pred E
Q 002256 856 S 856 (946)
Q Consensus 856 ~ 856 (946)
.
T Consensus 735 ~ 735 (772)
T COG1501 735 F 735 (772)
T ss_pred E
Confidence 3
No 5
>PRK10658 putative alpha-glucosidase; Provisional
Probab=100.00 E-value=1.1e-130 Score=1177.45 Aligned_cols=622 Identities=23% Similarity=0.448 Sum_probs=535.5
Q ss_pred EeEEEEeCCeEEEEEeec---ccCCCCCCCCceeEEEEEEEecCEEEEEEEeCC-----CCceecCccCCCCCCCCcccc
Q 002256 61 LISIEEVDGGILGHLQVK---EKNNIYGPDIPLLQLYVKHETEDRLRVHITDAQ-----KQRWEVPYNLLPREQPPKLKQ 132 (946)
Q Consensus 61 v~~~~~~~~~~~a~L~~~---~~~~~~g~di~~L~l~v~~~~~~~lrvkI~d~~-----~~r~evP~~l~p~~~~~~~~~ 132 (946)
+..++..++.+++....+ .+..+. +.+.++++|+...+++|||+++... .+.|++.. .+... .
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~iirV~~~~~~~~~~~~~~~~~~~----~~~~~-~-- 92 (665)
T PRK10658 22 VYDVEQQDNELVVYAPPRDVRERGDTL--DTPLFTIRFSSPQEGVIGVRIEHFQGALDNGPHFPLNI----LQDVK-V-- 92 (665)
T ss_pred eeEEEEcCCEEEEEecceEcCCccccc--CCCeEEEEEEeccCCeEEEEEECCCCccCCCCCceecc----CCCCc-e--
Confidence 345555566666554322 122222 2456788888899999999999532 22344321 11111 1
Q ss_pred ccccccCCCceeeecCCCeEEEEEEec-CcEEEEEEecCCeEEEecCCCCCCCCCCceE---eccEEEEEEecCCCceee
Q 002256 133 TIGRTRKNPIAVSDYSSNGLIFSYSAD-PFSFAVKRKSNGETLFNTSSDESDPFGPMVF---KDQYLEISTKLPKDASLY 208 (946)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~l~~~~~~~-PF~f~v~r~s~g~vlf~t~~~~~~~~~~l~f---~dq~l~~st~l~~~~~iY 208 (946)
.+.++. +..++++.+|++.|+++ ||.+++++ +|++|+.+.... ...+. ...++...+.|+.+|++|
T Consensus 93 ~i~~~~----~~~~i~s~~l~v~i~~~~~~~i~~~~--~g~~l~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~E~~y 162 (665)
T PRK10658 93 EIEETE----DYAELKSGNLSARVSKGEFWSLDFLR--NGRRLTGSQLKS----NGYVQDNDGRNYMREQLDLGVGETVY 162 (665)
T ss_pred EEEEcC----CEEEEEeCCEEEEEEcCCCeEEEEEE--CCeEEeeccCcc----cceeecCCCcEEEEEEEecCCCCeEE
Confidence 122111 23456778999999975 89999994 678888654211 11222 125788889999999999
Q ss_pred ecCCCCCCCCcccCCCCcEEeeeccCCCCCCCCCccceeeeEEEecCCCCCCceEEEEEecCCceeEEEeC---CeEEEE
Q 002256 209 GLGENTQPHGIKLYPNDPYTLYTTDVSAINLNTDLYGSHPVYMDLRNVNGEGAAHGVLLLSSNGMDVFYKG---TSLTYK 285 (946)
Q Consensus 209 GlGE~~~~~~~~l~~~~~~~l~n~D~~~~~~~~~lYgs~Pf~~~~~~~~~~g~~~Gvf~~Ns~~~dv~~~~---~~~~~~ 285 (946)
||||++++ + .++|++++|||+|.+. ...++|++|||||+.++ +|||++|+..+.+.++. +.++|.
T Consensus 163 GlGE~~~~--l-~~~G~~~~~wn~D~~~--~~~~~Y~~iPf~~s~~g-------yGvf~dn~~~~~fd~g~~~~~~~~~~ 230 (665)
T PRK10658 163 GLGERFTA--F-VKNGQTVDIWNRDGGT--SSEQAYKNIPFYLTNRG-------YGVFVNHPQCVSFEVGSEKVSKVQFS 230 (665)
T ss_pred CCCccCCc--c-ccCCcEEEEEECCCCC--CCccccccccEEEecCc-------EEEEEcCCCceEEEEecCccceEEEE
Confidence 99999974 4 4789999999999643 34689999999998643 89999999998888764 578899
Q ss_pred EEccEEEEEEEeCCChHHHHHHHHhhcCCCCCCCcccccceecc-CCC-CCHHHHHHHHHHHHHcCCCceEEEecCCCCC
Q 002256 286 IIGGVFDFYFFAGPSPLAVVDQYTAFIGRPAPMPYWSLGFHQCR-WGY-HNLSVVEDVVENYKKAKIPLDVIWNDDDHMD 363 (946)
Q Consensus 286 ~~gG~lD~y~f~Gp~p~~vi~qY~~ltG~p~lpP~WalG~hq~r-~gY-~~~~~v~~vv~~~~~~~IPlD~iw~Didym~ 363 (946)
++||.||+||+.||+|++|+++|++|||+|+|||+||||||||| |.+ .++++|++++++|++++||||+||+|++||+
T Consensus 231 ~~g~~ldyy~~~G~tp~~v~~~Yt~LTGrp~lpP~WalG~w~s~~~~~~~~e~~v~~~~~~~r~~~iP~d~i~lD~~w~~ 310 (665)
T PRK10658 231 VEGEYLEYFVIDGPTPKEVLDRYTALTGRPALPPAWSFGLWLTTSFTTNYDEATVNSFIDGMAERDLPLHVFHFDCFWMK 310 (665)
T ss_pred ecCCcEEEEEEeCCCHHHHHHHHHHHhCCCCCCchhhhheeeecccccCCCHHHHHHHHHHHHHcCCCceEEEEchhhhc
Confidence 99999999999999999999999999999999999999999999 433 3688999999999999999999999999999
Q ss_pred C--ceeeeeCCCCCCChhHHHHHHHHHHcCCEEEEEeCCCCccCCCcHHhHhcccCcEEEe-eCCcceEEEecCCccccc
Q 002256 364 G--HKDFTLNPTNYPRPKLLAFLEKIHKIGMKYIVIIDPGIGVNSSYGVYQRGIANDVFIK-YEGEPYLAQVWPGAVNFP 440 (946)
Q Consensus 364 ~--~~~Ft~d~~~FP~p~l~~~v~~Lh~~g~k~v~iidP~I~~~~~y~~y~~g~~~~~fik-~~g~~~~g~~WpG~~~~p 440 (946)
+ +++|+||+++||+|+ +|+++||++|+|+++|++|+|+. +++.|++|+++|+||| .+|+++.+.+|||.+++|
T Consensus 311 ~~~~~~f~wd~~~FPdp~--~mi~~L~~~G~k~~~~i~P~i~~--~s~~f~e~~~~gy~vk~~~G~~~~~~~W~g~~~~~ 386 (665)
T PRK10658 311 EFQWCDFEWDPRTFPDPE--GMLKRLKAKGLKICVWINPYIAQ--KSPLFKEGKEKGYLLKRPDGSVWQWDKWQPGMAIV 386 (665)
T ss_pred CCceeeeEEChhhCCCHH--HHHHHHHHCCCEEEEeccCCcCC--CchHHHHHHHCCeEEECCCCCEeeeeecCCCceee
Confidence 7 579999999999987 99999999999999999999985 5799999999999999 579999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCccEEEEeCCCCcccCCCcccCCCCCCCCCCCCCCccccccCCCcccCCCCCCCcccc
Q 002256 441 DFLNPKTVSWWGDEIRRFHELVPVDGLWIDMNEASNFCSGLCKIPKGKQCPTGTGPGWVCCLDCKNITKTRWDDPPYKIN 520 (946)
Q Consensus 441 Df~np~a~~ww~~~~~~~~~~~g~dg~W~DmnEps~F~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ppy~~~ 520 (946)
|||||+|++||.++++++.+ .|+||||+||+|+.
T Consensus 387 Dftnp~ar~W~~~~~~~l~d-~Gvdgfw~D~gE~~--------------------------------------------- 420 (665)
T PRK10658 387 DFTNPDACKWYADKLKGLLD-MGVDCFKTDFGERI--------------------------------------------- 420 (665)
T ss_pred cCCCHHHHHHHHHHHHHHHh-cCCcEEEecCCcee---------------------------------------------
Confidence 99999999999999999876 69999999999852
Q ss_pred cCCCccccccccccccccccCCccccccccchhhHHHHHHHHHHHhcc-CCCccEEeccccCCCCCceeeeCCCCCCChH
Q 002256 521 ASGLQVPIGFKTIATSAYHYNGVLEYDAHSIYGFSQSIATHKALLGLE-GKRPFILSRSTFVGSGHYAAHWTGDNKGTWE 599 (946)
Q Consensus 521 ~~g~~~~l~~~ti~~~~~h~~g~~~~~~HNlYg~~~~~at~~~l~~~~-~kRpfilsRS~f~Gs~ry~~~WtGDn~s~W~ 599 (946)
|.|++|++|..++++||+|++++++|+++++++.. ++|||+|+||+|+|+|||+++|+|||.|+|+
T Consensus 421 -------------p~d~~~~~G~~~~~~hN~Y~~l~~ka~~e~l~~~~~~~r~~i~tRs~~aGsQry~~~WsGD~~stw~ 487 (665)
T PRK10658 421 -------------PTDVVWFDGSDPQKMHNYYTYLYNKTVFDVLKETRGEGEAVLFARSATVGGQQFPVHWGGDCYSNYE 487 (665)
T ss_pred -------------eccceecCCCcHHHhcchhHHHHHHHHHHHHHHhcCCCceEEEEecccCCCCCCCCEECCCCCCCHH
Confidence 23456778888899999999999999999999864 6899999999999999999999999999999
Q ss_pred HHHHhHHhhhcccccCCceeeccccccCCCCChhHHHHHHHhccccceeccCCCCCCCCcccccch-HHHHHHHHHHHHH
Q 002256 600 DLKYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQWE-SVAESARNALGMR 678 (946)
Q Consensus 600 ~L~~sI~~~L~~~l~Gip~~G~DIgGF~g~~~~EL~~RW~QlgaF~Pf~R~H~~~~~~~qeP~~~~-~~~~~~r~ai~lR 678 (946)
+|+.+|+++|++||+|+||||+|||||.|.+++|||+||+|+|+|+|+||+|+.. ..||||.|+ ++.+++|+++++|
T Consensus 488 ~l~~si~~~Ls~glsG~~~~g~DIGGF~g~~~~ELy~RW~Q~g~f~P~~R~Hg~~--~~~ePW~fg~e~~~i~r~~i~lR 565 (665)
T PRK10658 488 SMAESLRGGLSLGLSGFGFWSHDIGGFENTATADVYKRWCAFGLLSSHSRLHGSK--SYRVPWAYDEEAVDVVRFFTKLK 565 (665)
T ss_pred HHHHHHHHHHHHHhcCCccccCccCCCCCCCCHHHHHHHHHhcccChhhcccCCC--CCcCCcccCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999864 469999995 6889999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCcccccccCCCCCcchhccCCeeeecCceeeeccccCCCeeEEEEcCCCeeeeeccCceeE
Q 002256 679 YKLLPFLYTLNYEAHLSGAPIARPLFFSFPNYVECYNVSTQFLLGSSLMVSPVLEQGKSQVKALFPPGSWYNVFDMTQAI 758 (946)
Q Consensus 679 Y~LLPYlYtl~~~a~~~G~Pv~RPL~~efP~D~~~~~i~~Qfm~G~~LLVaPVl~~g~t~~~vYlP~G~Wyd~~t~~~~~ 758 (946)
|+|||||||++++||++|.|||||||+|||+|+.++++++|||+|++||||||++++. +|+||||+|.||||||++.
T Consensus 566 y~LlPYlYs~~~~a~~~G~PimRPL~~efP~D~~~~~~~~qfmlG~~lLVAPV~~~~~-~r~VYLP~G~W~d~~tg~~-- 642 (665)
T PRK10658 566 CRLMPYLYREAAEAHERGTPMMRAMVLEFPDDPACDYLDRQYMLGDSLLVAPVFSEAG-DVEYYLPEGRWTHLLTGEE-- 642 (665)
T ss_pred HHHHHHHHHHHHHHHhhCCccccchhccCCCChHHhcCCCceEecCCeEEeEeecCCc-eEEEEcCCCeEEEccCCcE--
Confidence 9999999999999999999999999999999999999999999999999999999995 7999999999999999953
Q ss_pred EccCCeEEEEeeCCceeeEEEeCC
Q 002256 759 SSKDGKFVTLDAPLHVVNVHLYQN 782 (946)
Q Consensus 759 ~~~gG~~~~~~apl~~iPvfvR~G 782 (946)
++||+++++.+|+++||||||+|
T Consensus 643 -~~Gg~~i~~~~~l~~iPvfvR~G 665 (665)
T PRK10658 643 -VEGGRWHKEQHDFLSLPLLVRPN 665 (665)
T ss_pred -EECCEEEEEeCCCccCCEEEcCC
Confidence 36999999999999999999998
No 6
>PRK10426 alpha-glucosidase; Provisional
Probab=100.00 E-value=8.7e-121 Score=1089.86 Aligned_cols=519 Identities=22% Similarity=0.375 Sum_probs=465.1
Q ss_pred EeccEEEEEEecCCCceeeecCCCCCCCCcccCCCCcEEeeeccCCCC-C-----------------CCCCccceeeeEE
Q 002256 190 FKDQYLEISTKLPKDASLYGLGENTQPHGIKLYPNDPYTLYTTDVSAI-N-----------------LNTDLYGSHPVYM 251 (946)
Q Consensus 190 f~dq~l~~st~l~~~~~iYGlGE~~~~~~~~l~~~~~~~l~n~D~~~~-~-----------------~~~~lYgs~Pf~~ 251 (946)
+++.-+.+.+.++++|++|||||++.. + .++|+++.|||+|++.. + ...++|.++||||
T Consensus 67 ~~~~~~~~~~~~~~~E~~yGlGE~~~~--l-~~rG~~~~~w~~d~~~g~~~~~~~~~~~d~~~~~gg~~~~tY~~iPf~i 143 (635)
T PRK10426 67 LTDNRIWLRLAADPDEHIYGCGEQFSY--F-DLRGKPFPLWTSEQGVGRNKQTYVTWQADCKENAGGDYYWTYFPQPTFV 143 (635)
T ss_pred ccCcEEEEEEecCCCCeEECCCcCCCh--H-hhCCCEEeeeecccccCcCccccccccccccccccCccccccceeCEEE
Confidence 344456678888899999999999873 3 56799999999987521 1 0147899999999
Q ss_pred EecCCCCCCceEEEEEecCCceeEEEeC-CeEEEEEEccEEEEEEEeCCChHHHHHHHHhhcCCCCCCCcccc-cceecc
Q 002256 252 DLRNVNGEGAAHGVLLLSSNGMDVFYKG-TSLTYKIIGGVFDFYFFAGPSPLAVVDQYTAFIGRPAPMPYWSL-GFHQCR 329 (946)
Q Consensus 252 ~~~~~~~~g~~~Gvf~~Ns~~~dv~~~~-~~~~~~~~gG~lD~y~f~Gp~p~~vi~qY~~ltG~p~lpP~Wal-G~hq~r 329 (946)
++++ +|||++|++.+++.++. +..++...+|.+|+|||.|++|++|+++|++|||||+|||+||| |+|++.
T Consensus 144 Ss~~-------ygv~~dn~~~~~fd~~~~~~~~~~~~~~~~d~y~~~G~~~~~vi~~yt~ltGr~p~~P~Wal~G~~~g~ 216 (635)
T PRK10426 144 SSQK-------YYCHVDNSAYMNFDFSAPEYHELELWEDKATLRFECADTYISLLEKLTALFGRQPELPDWAYDGVTLGI 216 (635)
T ss_pred EcCC-------EEEEEcCCCcEEEEecCCCccEEEEEeCCeeEEEEeCCCHHHHHHHHHHhhCCCCCCChhhccCccccc
Confidence 8643 89999999999998874 44556667899999999999999999999999999999999999 999765
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCceEEEecCCCCCC---------ceeeeeCCCCCCChhHHHHHHHHHHcCCEEEEEeCC
Q 002256 330 WGYHNLSVVEDVVENYKKAKIPLDVIWNDDDHMDG---------HKDFTLNPTNYPRPKLLAFLEKIHKIGMKYIVIIDP 400 (946)
Q Consensus 330 ~gY~~~~~v~~vv~~~~~~~IPlD~iw~Didym~~---------~~~Ft~d~~~FP~p~l~~~v~~Lh~~g~k~v~iidP 400 (946)
.+ ++++|+++++++|+++||||+||+| ||++. +.+||||+++||+|+ +||++||++|+|+++|+||
T Consensus 217 ~~--~~~~v~~v~~~~r~~~IP~d~i~ld-dw~~~~~~~~g~~~~~~~~~d~~~FPdp~--~mi~~L~~~G~k~v~~i~P 291 (635)
T PRK10426 217 QG--GTEVVQKKLDTMRNAGVKVNGIWAQ-DWSGIRMTSFGKRLMWNWKWDSERYPQLD--SRIKQLNEEGIQFLGYINP 291 (635)
T ss_pred cC--CHHHHHHHHHHHHHcCCCeeEEEEe-cccccccccccccccccceEChhhCCCHH--HHHHHHHHCCCEEEEEEcC
Confidence 43 6889999999999999999999999 77642 236899999999987 9999999999999999999
Q ss_pred CCccCCCcHHhHhcccCcEEEe-eCCcceEEEecCCcccccCCCCHHHHHHHHHHHHHhhccCCccEEEEeCCCCcccCC
Q 002256 401 GIGVNSSYGVYQRGIANDVFIK-YEGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHELVPVDGLWIDMNEASNFCS 479 (946)
Q Consensus 401 ~I~~~~~y~~y~~g~~~~~fik-~~g~~~~g~~WpG~~~~pDf~np~a~~ww~~~~~~~~~~~g~dg~W~DmnEps~F~~ 479 (946)
+|+. +|+.|++|.++|+|+| .+|++|.+.+|||.+++||||||+|++||++++++.+.+.|+||||+||||+.
T Consensus 292 ~v~~--~~~~y~e~~~~gy~vk~~~g~~~~~~~~~~~~~~~Dftnp~ar~Ww~~~~~~~~~~~Gvdg~w~D~~E~~---- 365 (635)
T PRK10426 292 YLAS--DGDLCEEAAEKGYLAKDADGGDYLVEFGEFYAGVVDLTNPEAYEWFKEVIKKNMIGLGCSGWMADFGEYL---- 365 (635)
T ss_pred ccCC--CCHHHHHHHHCCcEEECCCCCEEEeEecCCCceeecCCCHHHHHHHHHHHHHHHhhcCCCEEeeeCCCCC----
Confidence 9986 5899999999999999 57999999999999999999999999999999987777789999999999941
Q ss_pred CcccCCCCCCCCCCCCCCccccccCCCcccCCCCCCCcccccCCCccccccccccccccccCCccccccccchhhHHHHH
Q 002256 480 GLCKIPKGKQCPTGTGPGWVCCLDCKNITKTRWDDPPYKINASGLQVPIGFKTIATSAYHYNGVLEYDAHSIYGFSQSIA 559 (946)
Q Consensus 480 g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ppy~~~~~g~~~~l~~~ti~~~~~h~~g~~~~~~HNlYg~~~~~a 559 (946)
|.|+.|++|..+.++||+||++++++
T Consensus 366 ------------------------------------------------------p~d~~~~~g~~~~~~hN~Y~~l~~~~ 391 (635)
T PRK10426 366 ------------------------------------------------------PTDAYLHNGVSAEIMHNAWPALWAKC 391 (635)
T ss_pred ------------------------------------------------------CCcceeeCCCCHHHhccHHHHHHHHH
Confidence 12345677888888999999999999
Q ss_pred HHHHHHhcc-CCCccEEeccccCCCCCcee-eeCCCCCCChH---HHHHhHHhhhcccccCCceeeccccccCC----CC
Q 002256 560 THKALLGLE-GKRPFILSRSTFVGSGHYAA-HWTGDNKGTWE---DLKYSISTMLNFGIFGVPMVGSDICGFYP----AP 630 (946)
Q Consensus 560 t~~~l~~~~-~kRpfilsRS~f~Gs~ry~~-~WtGDn~s~W~---~L~~sI~~~L~~~l~Gip~~G~DIgGF~g----~~ 630 (946)
+++|+++.. .+|||+||||+|+|+|||++ +|+|||.|+|+ +|+.+|+++|++||+|+||+|+|||||.+ .+
T Consensus 392 ~~e~~~~~~~~~r~f~ltRsg~aGsQry~~~~WsGD~~ssW~~~d~L~~~I~~~Ls~glsG~~~~g~DIGGF~~~~~~~~ 471 (635)
T PRK10426 392 NYEALEETGKLGEILFFMRAGYTGSQKYSTLFWAGDQNVDWSLDDGLASVVPAALSLGMSGHGLHHSDIGGYTTLFGMKR 471 (635)
T ss_pred HHHHHHHhcCCCCcEEEEccccCCcCCccccccCCCCCCcCcChhHHHHHHHHHHHHHhcCcCccccccCCCcCcCCCCC
Confidence 999998764 46999999999999999985 89999999995 89999999999999999999999999974 58
Q ss_pred ChhHHHHHHHhccccceeccCCCCCCCCcccccch---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccCC
Q 002256 631 TEELCNRWIEVGAFYPFSRDHANYYSPRQELYQWE---SVAESARNALGMRYKLLPFLYTLNYEAHLSGAPIARPLFFSF 707 (946)
Q Consensus 631 ~~EL~~RW~QlgaF~Pf~R~H~~~~~~~qeP~~~~---~~~~~~r~ai~lRY~LLPYlYtl~~~a~~~G~Pv~RPL~~ef 707 (946)
++|||+||+|+|||+|+||+|+.. .++|||.|. ++.+.+++++++||+|||||||++++||++|.|||||||++|
T Consensus 472 ~~EL~~RW~Q~gaF~P~~R~H~~~--~~~epw~f~~~~~~~~~~~~~~~lRy~LlPYlytl~~~a~~tG~Pi~RPL~~~f 549 (635)
T PRK10426 472 TKELLLRWCEFSAFTPVMRTHEGN--RPGDNWQFDSDAETIAHFARMTRVFTTLKPYLKELVAEAAKTGLPVMRPLFLHY 549 (635)
T ss_pred CHHHHHHHHHHhcCCceeecCCCC--CCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccccccC
Confidence 999999999999999999999864 689999984 456677889999999999999999999999999999999999
Q ss_pred CCCcchhccCCeeeecCceeeeccccCCCeeEEEEcCCCeeeeeccCceeEEccCCeEEEEeeCCceeeEEEeCCeEEec
Q 002256 708 PNYVECYNVSTQFLLGSSLMVSPVLEQGKSQVKALFPPGSWYNVFDMTQAISSKDGKFVTLDAPLHVVNVHLYQNTILPM 787 (946)
Q Consensus 708 P~D~~~~~i~~Qfm~G~~LLVaPVl~~g~t~~~vYlP~G~Wyd~~t~~~~~~~~gG~~~~~~apl~~iPvfvR~GsIiP~ 787 (946)
|+|+.++++++|||+|++||||||+++++++|+||||+|.|||+||++. ++|| ++++++||++||||||+|+||+.
T Consensus 550 P~D~~~~~i~~qfm~G~~LLVAPV~~~g~~~r~VYLP~g~W~d~~tg~~---~~Gg-~i~v~apl~~iPvFvR~Gsi~~~ 625 (635)
T PRK10426 550 EDDAATYTLKYQYLLGRDLLVAPVHEEGRTDWTVYLPEDKWVHLWTGEA---FAGG-EITVEAPIGKPPVFYRAGSEWAS 625 (635)
T ss_pred CCChHHhcCCcceEecCCeEEeeeccCCceEEEEECCCCcEEECCCCCE---EECC-EEEEeCCCCCcCEEEECCeEhHH
Confidence 9999999999999999999999999999999999999999999999964 3688 99999999999999999999986
Q ss_pred cc
Q 002256 788 QQ 789 (946)
Q Consensus 788 ~~ 789 (946)
.-
T Consensus 626 ~~ 627 (635)
T PRK10426 626 LF 627 (635)
T ss_pred Hh
Confidence 53
No 7
>PF01055 Glyco_hydro_31: Glycosyl hydrolases family 31 ; InterPro: IPR000322 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 31 GH31 from CAZY comprises enzymes with several known activities; alpha-glucosidase (3.2.1.20 from EC), alpha-galactosidase (3.2.1.22 from EC); glucoamylase (3.2.1.3 from EC), sucrase-isomaltase (3.2.1.48 from EC); isomaltase (3.2.1.10 from EC); alpha-xylosidase (3.2.1 from EC); alpha-glucan lyase (4.2.2.13 from EC). Glycoside hydrolase family 31 groups a number of glycosyl hydrolases on the basis of sequence similarities [, , ] An aspartic acid has been implicated [] in the catalytic activity of sucrase, isomaltase, and lysosomal alpha-glucosidase.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3L4U_A 3L4X_A 3L4W_A 3L4V_A 3CTT_A 2QMJ_A 2QLY_A 3L4Z_A 3L4Y_A 3L4T_A ....
Probab=100.00 E-value=2.2e-110 Score=973.71 Aligned_cols=437 Identities=41% Similarity=0.853 Sum_probs=391.5
Q ss_pred EEEeCCChHHHHHHHHhhcCCCCCCCcccccceeccCCCCCHHHHHHHHHHHHHcCCCceEEEecCCCCCCceeeeeCCC
Q 002256 294 YFFAGPSPLAVVDQYTAFIGRPAPMPYWSLGFHQCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDHMDGHKDFTLNPT 373 (946)
Q Consensus 294 y~f~Gp~p~~vi~qY~~ltG~p~lpP~WalG~hq~r~gY~~~~~v~~vv~~~~~~~IPlD~iw~Didym~~~~~Ft~d~~ 373 (946)
|||.|++|++|+++|++|||||+|||+||||+|+|||+|.++++|+++++++++++||+|++|+|++|++++++|+||++
T Consensus 1 y~~~G~~~~~v~~~y~~ltG~~~~pP~walG~~~~~~~~~~~~~v~~~i~~~~~~~iP~d~~~iD~~~~~~~~~f~~d~~ 80 (441)
T PF01055_consen 1 YFFSGPTPKEVLRQYTELTGRPPLPPRWALGFWQSRWGYYNQDEVREVIDRYRSNGIPLDVIWIDDDYQDGYGDFTWDPE 80 (441)
T ss_dssp EEEEESSHHHHHHHHHHHHSSS----GGGGSEEEEESTBTSHHHHHHHHHHHHHTT--EEEEEE-GGGSBTTBTT-B-TT
T ss_pred CEEeCcCHHHHHHHHHHHHCCCCCCchhhhceEeecCcCCCHHHHHHHHHHHHHcCCCccceeccccccccccccccccc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEeCCCCccCCC-cHHhHhcccCcEEEe-eCCcceEEEecCCcccccCCCCHHHHHHH
Q 002256 374 NYPRPKLLAFLEKIHKIGMKYIVIIDPGIGVNSS-YGVYQRGIANDVFIK-YEGEPYLAQVWPGAVNFPDFLNPKTVSWW 451 (946)
Q Consensus 374 ~FP~p~l~~~v~~Lh~~g~k~v~iidP~I~~~~~-y~~y~~g~~~~~fik-~~g~~~~g~~WpG~~~~pDf~np~a~~ww 451 (946)
+||+|+ +|++.||++|+|++++++|+|..+.. |..|+++.++|+|+| .+|+++.+.+|||.+++|||+||++++||
T Consensus 81 ~FPd~~--~~~~~l~~~G~~~~~~~~P~v~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~w~g~~~~~Dftnp~a~~w~ 158 (441)
T PF01055_consen 81 RFPDPK--QMIDELHDQGIKVVLWVHPFVSNDSPDYENYDEAKEKGYLVKNPDGSPYIGRVWPGKGGFIDFTNPEARDWW 158 (441)
T ss_dssp TTTTHH--HHHHHHHHTT-EEEEEEESEEETTTTB-HHHHHHHHTT-BEBCTTSSB-EEEETTEEEEEB-TTSHHHHHHH
T ss_pred cccchH--HHHHhHhhCCcEEEEEeecccCCCCCcchhhhhHhhcCceeecccCCcccccccCCcccccCCCChhHHHHH
Confidence 999876 99999999999999999999998765 889999999999999 47899999999999999999999999999
Q ss_pred HHHHHHhhccCCccEEEEeCCCCcccCCCcccCCCCCCCCCCCCCCccccccCCCcccCCCCCCCcccccCCCccccccc
Q 002256 452 GDEIRRFHELVPVDGLWIDMNEASNFCSGLCKIPKGKQCPTGTGPGWVCCLDCKNITKTRWDDPPYKINASGLQVPIGFK 531 (946)
Q Consensus 452 ~~~~~~~~~~~g~dg~W~DmnEps~F~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ppy~~~~~g~~~~l~~~ 531 (946)
.++++++++..|+||||+|||||+.|.. +.
T Consensus 159 ~~~~~~~~~~~Gvdg~w~D~~E~~~~~~--------------------------------------------------~~ 188 (441)
T PF01055_consen 159 KEQLKELLDDYGVDGWWLDFGEPSSFDS--------------------------------------------------NN 188 (441)
T ss_dssp HHHHHHHHTTST-SEEEEESTTTBSSTT--------------------------------------------------TB
T ss_pred HHHHHHHHhccCCceEEeecCCcccccc--------------------------------------------------cc
Confidence 9999999998899999999999986531 13
Q ss_pred cccccccccCCccccccccchhhHHHHHHHHHHHh-ccCCCccEEeccccCCCCCceeeeCCCCCCChHHHHHhHHhhhc
Q 002256 532 TIATSAYHYNGVLEYDAHSIYGFSQSIATHKALLG-LEGKRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLN 610 (946)
Q Consensus 532 ti~~~~~h~~g~~~~~~HNlYg~~~~~at~~~l~~-~~~kRpfilsRS~f~Gs~ry~~~WtGDn~s~W~~L~~sI~~~L~ 610 (946)
+++.++.|+++..++++||+|++++++++++++++ .+++|||+++||+|+|+|||+++|+||+.++|++|+.+|+++|+
T Consensus 189 ~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~~~~~~~~~~~r~~~~sRs~~~G~qr~~~~w~GD~~s~w~~L~~~i~~~l~ 268 (441)
T PF01055_consen 189 TLPEDAVHHDGYSGYEMHNLYGLLYAKATYEALREIDPNKRPFIFSRSGWAGSQRYGGHWSGDNSSSWDGLRSSIPAMLN 268 (441)
T ss_dssp SBCTTEECTTECEHHHHGGGHHHHHHHHHHHHHHHHSTTSC-EEEESSEETTGGGTCEEEECSSBSSHHHHHHHHHHHHH
T ss_pred cCcccceecCCCCchheeccccccchhhhhhhhhhccCCCCcceeecccCCCCCccceeecccccccHHHHHHHHHHHHH
Confidence 45667788888899999999999999999999987 45899999999999999999999999999999999999999999
Q ss_pred ccccCCceeeccccccCCCCChhHHHHHHHhccccceeccCCCCCCCCcccccchH-HHHHHHHHHHHHHHHHHHHHHHH
Q 002256 611 FGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQWES-VAESARNALGMRYKLLPFLYTLN 689 (946)
Q Consensus 611 ~~l~Gip~~G~DIgGF~g~~~~EL~~RW~QlgaF~Pf~R~H~~~~~~~qeP~~~~~-~~~~~r~ai~lRY~LLPYlYtl~ 689 (946)
+|++|+|++|+|||||.+.+++|||+||+|+|+|+|+||+|+..+..++|||.|++ +.+++|+++++||+||||+||++
T Consensus 269 ~~~~G~~~~g~DigG~~~~~~~eL~~RW~q~~~f~p~~r~h~~~~~~~~~Pw~~~~~~~~~~r~~~~lRy~L~PY~ys~~ 348 (441)
T PF01055_consen 269 MGLSGYPFWGSDIGGFSGDPDEELYIRWYQFGAFSPLFRNHGNKPSNPREPWSFGDEAEDIFRRAIRLRYRLLPYIYSLA 348 (441)
T ss_dssp HHCTT-SSEEEEET-SBSTSSHHHHHHHHHHHTTSSSEEEEESTTSSB-SGGGSSCTHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred HhhhhcceecCcccccCCCCCHHHHHHHHHhhcCCcceeecCCcccccccccccchHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999888778899999975 78889999999999999999999
Q ss_pred HHHHHcCCCcccccccCCCCCcchhccCCeeeecCceeeeccccCCCeeEEEEcCCCeeeeeccCceeEEccCCeEEEEe
Q 002256 690 YEAHLSGAPIARPLFFSFPNYVECYNVSTQFLLGSSLMVSPVLEQGKSQVKALFPPGSWYNVFDMTQAISSKDGKFVTLD 769 (946)
Q Consensus 690 ~~a~~~G~Pv~RPL~~efP~D~~~~~i~~Qfm~G~~LLVaPVl~~g~t~~~vYlP~G~Wyd~~t~~~~~~~~gG~~~~~~ 769 (946)
++|+.+|.||||||+++||+|+.++++++|||+|++||||||+++|+++|+||||+|.|||+||++. + +||+++++.
T Consensus 349 ~~a~~~G~Pi~Rpl~~~~p~d~~~~~~~~q~m~G~~lLVaPV~~~g~~~~~vylP~G~W~d~~tg~~-~--~gg~~~~~~ 425 (441)
T PF01055_consen 349 YEAHATGEPIMRPLFWEFPNDPNAYDIDDQFMFGDDLLVAPVLEPGATSRTVYLPEGTWYDFWTGEK-Y--EGGQTITVE 425 (441)
T ss_dssp HHHHHHT--SEEEHHHHSTTSGGGGGTTSSEEETTTEEEE---STTSSEEEEEESSSEEEETTTCCE-E--ESSEEEEEE
T ss_pred HHHccCCCCcccccccCCCccHhHhhcCCccccCCCEEEEeeeeecccccEEECCCCeEEECCCCCE-E--ECCEEEEEe
Confidence 9999999999999999999999999999999999999999999999999999999999999999964 3 699999999
Q ss_pred eCCceeeEEEeCCeEE
Q 002256 770 APLHVVNVHLYQNTIL 785 (946)
Q Consensus 770 apl~~iPvfvR~GsIi 785 (946)
+|++++|||||+|+||
T Consensus 426 ~~l~~~P~fvr~Gsii 441 (441)
T PF01055_consen 426 APLDEIPVFVRAGSII 441 (441)
T ss_dssp --TTSCEEEEETTEEE
T ss_pred CCCCccCeEEECCEeC
Confidence 9999999999999998
No 8
>cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase. MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal domain found near the membrane-bound end, and a C-terminal luminal domain. Both of
Probab=100.00 E-value=3.6e-92 Score=790.58 Aligned_cols=334 Identities=60% Similarity=1.162 Sum_probs=321.2
Q ss_pred CCCCCCCcccccceeccCCCCCHHHHHHHHHHHHHcCCCceEEEecCCCCCCceeeeeCCCCCCChhHHHHHHHHHHcCC
Q 002256 313 GRPAPMPYWSLGFHQCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDHMDGHKDFTLNPTNYPRPKLLAFLEKIHKIGM 392 (946)
Q Consensus 313 G~p~lpP~WalG~hq~r~gY~~~~~v~~vv~~~~~~~IPlD~iw~Didym~~~~~Ft~d~~~FP~p~l~~~v~~Lh~~g~ 392 (946)
|||+|||+||||||||||+|+++++|+++++++|+++||||+||+|++|++++++|+||+++||+|++++||++||++|+
T Consensus 1 G~p~lpP~walG~~~s~~~y~~~~~v~~~~~~~r~~~iP~d~i~lD~~~~~~~~~f~~d~~~FPdp~~~~mi~~L~~~G~ 80 (339)
T cd06602 1 GRPAMPPYWALGFHLCRWGYKNVDEVKEVVENMRAAGIPLDVQWNDIDYMDRRRDFTLDPVRFPGLKMPEFVDELHANGQ 80 (339)
T ss_pred CCCCCCchHHhhhHhcCCCCCCHHHHHHHHHHHHHhCCCcceEEECcccccCccceecccccCCCccHHHHHHHHHHCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999955599999999999
Q ss_pred EEEEEeCCCCccC---CCcHHhHhcccCcEEEe-eCCcceEEEecCCcccccCCCCHHHHHHHHHHHHHhhccCCccEEE
Q 002256 393 KYIVIIDPGIGVN---SSYGVYQRGIANDVFIK-YEGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHELVPVDGLW 468 (946)
Q Consensus 393 k~v~iidP~I~~~---~~y~~y~~g~~~~~fik-~~g~~~~g~~WpG~~~~pDf~np~a~~ww~~~~~~~~~~~g~dg~W 468 (946)
|+++|++|+|..+ +.|.+|++|+++|+||| .+|+++++.+|||.+++||||||+|++||.++++++++++|+||||
T Consensus 81 k~~~~i~P~v~~~~~~~~~~~~~e~~~~g~~v~~~~g~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~~~Gvdg~w 160 (339)
T cd06602 81 HYVPILDPAISANEPTGSYPPYDRGLEMDVFIKNDDGSPYIGKVWPGYTVFPDFLNPNTQEWWTDEIKDFHDQVPFDGLW 160 (339)
T ss_pred EEEEEEeCccccCcCCCCCHHHHHHHHCCeEEECCCCCEEEEEeCCCCCcCcCCCCHHHHHHHHHHHHHHHhcCCCcEEE
Confidence 9999999999976 57999999999999999 5799999999999999999999999999999999998889999999
Q ss_pred EeCCCCcccCCCcccCCCCCCCCCCCCCCccccccCCCcccCCCCCCCcccccCCCccccccccccccccccCCcccccc
Q 002256 469 IDMNEASNFCSGLCKIPKGKQCPTGTGPGWVCCLDCKNITKTRWDDPPYKINASGLQVPIGFKTIATSAYHYNGVLEYDA 548 (946)
Q Consensus 469 ~DmnEps~F~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ppy~~~~~g~~~~l~~~ti~~~~~h~~g~~~~~~ 548 (946)
+|||||++| +++
T Consensus 161 ~D~~Ep~~~--------------------------------------------------------------------~~~ 172 (339)
T cd06602 161 IDMNEPSNF--------------------------------------------------------------------YDV 172 (339)
T ss_pred ecCCCCchH--------------------------------------------------------------------hhh
Confidence 999998632 357
Q ss_pred ccchhhHHHHHHHHHHHhccCCCccEEeccccCCCCCceeeeCCCCCCChHHHHHhHHhhhcccccCCceeeccccccCC
Q 002256 549 HSIYGFSQSIATHKALLGLEGKRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYP 628 (946)
Q Consensus 549 HNlYg~~~~~at~~~l~~~~~kRpfilsRS~f~Gs~ry~~~WtGDn~s~W~~L~~sI~~~L~~~l~Gip~~G~DIgGF~g 628 (946)
||+|++++++++++++++..++|||++|||+|+|+|||+++|+||+.|+|++|+.+|+++|++|++|+||+|+|||||.|
T Consensus 173 hN~y~~~~~~~~~~~~~~~~~~r~~~~sRs~~~G~qry~~~w~GD~~s~W~~L~~~i~~~l~~~~sG~~~~~~DigGf~g 252 (339)
T cd06602 173 HNLYGLSEAIATYKALQSIPGKRPFVISRSTFPGSGRYAGHWLGDNASTWEDLRYSIIGMLEFNLFGIPMVGADICGFNG 252 (339)
T ss_pred cchhhHHHHHHHHHHHHhcCCCCCEEEEecCcccccccceeECCCccCCHHHHHHHHHHHHHHHhcCCCcccCCCCCCCC
Confidence 99999999999999999888899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHhccccceeccCCCCCCCCcccccch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccCC
Q 002256 629 APTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQWE-SVAESARNALGMRYKLLPFLYTLNYEAHLSGAPIARPLFFSF 707 (946)
Q Consensus 629 ~~~~EL~~RW~QlgaF~Pf~R~H~~~~~~~qeP~~~~-~~~~~~r~ai~lRY~LLPYlYtl~~~a~~~G~Pv~RPL~~ef 707 (946)
++++|||+||+|+|+|+|+||+|+..+..++|||.|+ ++.+++|+++++||+|+|||||++++|+++|.||||||+++|
T Consensus 253 ~~~~EL~~RW~Q~~~f~P~~r~H~~~~~~~~ePw~~~~~~~~~~r~~~~lRy~L~PYlys~~~~a~~~G~Pi~RPl~~~~ 332 (339)
T cd06602 253 DTTEELCARWMQLGAFYPFSRNHNDIGAIPQEPYVWGPSVADAARKALNIRYSLLPYLYTLFYEAHTSGTTVVRPLFFEF 332 (339)
T ss_pred CCCHHHHHHHHHHHhhCceeeccCCCCCCCcCCccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhccC
Confidence 9999999999999999999999999888899999997 689999999999999999999999999999999999999999
Q ss_pred CCCcchh
Q 002256 708 PNYVECY 714 (946)
Q Consensus 708 P~D~~~~ 714 (946)
|+|+++|
T Consensus 333 p~D~~~~ 339 (339)
T cd06602 333 PSDPNTY 339 (339)
T ss_pred CCCcccC
Confidence 9999875
No 9
>cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB). Initially distinguished on the basis of differences in electrophoretic mobility in starch gel, GANC and GANAB have been shown to have other differences, including those of substrate specificity. GANC and GANAB are key enzymes in glycogen metabolism that hydrolyze terminal, non-reducing 1,4-linked alpha-D-glucose residues from glycogen in the endoplasmic reticulum. The GANC/GANAB family includes the alpha-glucosidase II (ModA) from Dictyostelium discoideum as well as the alpha-glucosidase II (GLS2, or ROT2 - Reversal of TOR2 lethality protein 2) from Saccharomyces cerevisiae.
Probab=100.00 E-value=5.1e-89 Score=766.79 Aligned_cols=333 Identities=41% Similarity=0.793 Sum_probs=316.9
Q ss_pred CCCCCCCcccccceeccCCCCCHHHHHHHHHHHHHcCCCceEEEecCCCCCCceeeeeCCCCCCChhHHHHHHHHHHcCC
Q 002256 313 GRPAPMPYWSLGFHQCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDHMDGHKDFTLNPTNYPRPKLLAFLEKIHKIGM 392 (946)
Q Consensus 313 G~p~lpP~WalG~hq~r~gY~~~~~v~~vv~~~~~~~IPlD~iw~Didym~~~~~Ft~d~~~FP~p~l~~~v~~Lh~~g~ 392 (946)
|+|+|||+||||||||||+|+|+++|+++++++++++||||+||+|++||+++++|+||+++||+|+ +|+++||++|+
T Consensus 1 G~~~lpP~walG~~~sr~~y~~~~ev~~~~~~~~~~~iP~d~i~lD~~~~~~~~~f~~d~~~FPdp~--~mi~~L~~~G~ 78 (339)
T cd06603 1 GRPPLPPLFSLGYHQCRWNYKDQEDVKEVDAGFDEHDIPYDVIWLDIEHTDGKRYFTWDKKKFPDPE--KMQEKLASKGR 78 (339)
T ss_pred CCCCCCchHHHHHHhcCCCCCCHHHHHHHHHHHHHcCCCceEEEEChHHhCCCCceEeCcccCCCHH--HHHHHHHHCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999987 99999999999
Q ss_pred EEEEEeCCCCccCCCcHHhHhcccCcEEEe-eCCcceEEEecCCcccccCCCCHHHHHHHHHHHHHhhc--cCCccEEEE
Q 002256 393 KYIVIIDPGIGVNSSYGVYQRGIANDVFIK-YEGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHE--LVPVDGLWI 469 (946)
Q Consensus 393 k~v~iidP~I~~~~~y~~y~~g~~~~~fik-~~g~~~~g~~WpG~~~~pDf~np~a~~ww~~~~~~~~~--~~g~dg~W~ 469 (946)
|+++|++|+|..++++++|++|+++|+||| .+|++|.+.+|||.+++||||||+|++||.+++++++. ..|++|+|+
T Consensus 79 k~~~~~~P~v~~~~~~~~y~e~~~~g~~vk~~~g~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~~~~~g~~g~w~ 158 (339)
T cd06603 79 KLVTIVDPHIKRDDGYYVYKEAKDKGYLVKNSDGGDFEGWCWPGSSSWPDFLNPEVRDWWASLFSYDKYKGSTENLYIWN 158 (339)
T ss_pred EEEEEecCceecCCCCHHHHHHHHCCeEEECCCCCEEEEEECCCCcCCccCCChhHHHHHHHHHHHHhhcccCCCceEEe
Confidence 999999999998777999999999999999 47899999999999999999999999999999998875 479999999
Q ss_pred eCCCCcccCCCcccCCCCCCCCCCCCCCccccccCCCcccCCCCCCCcccccCCCccccccccccccccccCCccccccc
Q 002256 470 DMNEASNFCSGLCKIPKGKQCPTGTGPGWVCCLDCKNITKTRWDDPPYKINASGLQVPIGFKTIATSAYHYNGVLEYDAH 549 (946)
Q Consensus 470 DmnEps~F~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ppy~~~~~g~~~~l~~~ti~~~~~h~~g~~~~~~H 549 (946)
|||||++|+.. +.++|+++.|.+|..|+++|
T Consensus 159 D~~Ep~~f~~~-------------------------------------------------~~~~p~d~~~~~~~~~~~~h 189 (339)
T cd06603 159 DMNEPSVFNGP-------------------------------------------------ELTMPKDAIHYGGIEHREVH 189 (339)
T ss_pred ccCCccccCCC-------------------------------------------------CCcCCCcceecCCCcHHHHh
Confidence 99999988642 13456778888899999999
Q ss_pred cchhhHHHHHHHHHHHhcc--CCCccEEeccccCCCCCceeeeCCCCCCChHHHHHhHHhhhcccccCCceeeccccccC
Q 002256 550 SIYGFSQSIATHKALLGLE--GKRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFY 627 (946)
Q Consensus 550 NlYg~~~~~at~~~l~~~~--~kRpfilsRS~f~Gs~ry~~~WtGDn~s~W~~L~~sI~~~L~~~l~Gip~~G~DIgGF~ 627 (946)
|+|++++++|+++++++.. ++|||++|||+|+|+|||+++|+||+.|+|++|+.+|+++|++|++|+||||+|||||.
T Consensus 190 N~y~~~~~~a~~e~~~~~~~~~~r~~~~sRs~~~G~qry~~~W~GD~~s~W~~L~~~i~~~L~~~l~G~~~~g~DiGGf~ 269 (339)
T cd06603 190 NIYGLYMHMATFDGLLKRSEGNKRPFVLTRSFFAGSQRYAAIWTGDNTATWEHLKISIPMLLSLNICGIPFCGADVGGFF 269 (339)
T ss_pred hHhHHHHHHHHHHHHHHhhccCCceEEEEecccccccceeeeeCCCccCCHHHHHHHHHHHHHHhhcCccccCCccCCcC
Confidence 9999999999999998865 68999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHhccccceeccCCCCCCCCcccccch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q 002256 628 PAPTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQWE-SVAESARNALGMRYKLLPFLYTLNYEAHLSG 696 (946)
Q Consensus 628 g~~~~EL~~RW~QlgaF~Pf~R~H~~~~~~~qeP~~~~-~~~~~~r~ai~lRY~LLPYlYtl~~~a~~~G 696 (946)
|++++|||+||+|+|||+|+||+|+..++..||||.|+ ++.+++|+++++||+|||||||++++||++|
T Consensus 270 ~~~~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~~~lRy~LlPYlys~~~~a~~tG 339 (339)
T cd06603 270 GNPDEELLVRWYQAGAFYPFFRAHAHIDTKRREPWLFGEEYTSIIREAIRLRYALLPYWYTLFYEASVTG 339 (339)
T ss_pred CCCCHHHHHHHHHHhhcCceeecCCCCCCCCCCCeecChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 99999999999999999999999999888899999996 6889999999999999999999999999998
No 10
>cd06604 GH31_glucosidase_II_MalA Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities. Alpha-glucosidase II has been characterized in Bacillus thermoamyloliquefaciens where it forms a homohexamer. This family also includes the MalA alpha-glucosidase from Sulfolobus sulfataricus and the AglA alpha-glucosidase from Picrophilus torridus. MalA is part of the carbohydrate-metabolizing machinery that allows this organism to utilize carbohydrates, such as maltose, as the sole carbon and energy source.
Probab=100.00 E-value=1.4e-88 Score=763.50 Aligned_cols=333 Identities=43% Similarity=0.848 Sum_probs=314.8
Q ss_pred CCCCCCCcccccceeccCCCCCHHHHHHHHHHHHHcCCCceEEEecCCCCCCceeeeeCCCCCCChhHHHHHHHHHHcCC
Q 002256 313 GRPAPMPYWSLGFHQCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDHMDGHKDFTLNPTNYPRPKLLAFLEKIHKIGM 392 (946)
Q Consensus 313 G~p~lpP~WalG~hq~r~gY~~~~~v~~vv~~~~~~~IPlD~iw~Didym~~~~~Ft~d~~~FP~p~l~~~v~~Lh~~g~ 392 (946)
|||+|||+||||||||||+|+++++|+++++++|+++||+|+||+|++|++++++|+||+++||+|+ +|+++||++|+
T Consensus 1 G~p~l~P~walG~~~s~~~y~~~~~v~~~~~~~~~~~iP~d~i~lD~~~~~~~~~f~~d~~~fPdp~--~m~~~l~~~g~ 78 (339)
T cd06604 1 GRPPLPPKWALGYQQSRWSYYPEEEVREIADEFRERDIPCDAIYLDIDYMDGYRVFTWDKERFPDPK--ELIKELHEQGF 78 (339)
T ss_pred CCCCCCchHHHhHHhcCCCCCCHHHHHHHHHHHHHhCCCcceEEECchhhCCCCceeeccccCCCHH--HHHHHHHHCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999987 99999999999
Q ss_pred EEEEEeCCCCccCCCcHHhHhcccCcEEEe-eCCcceEEEecCCcccccCCCCHHHHHHHHHHHHHhhccCCccEEEEeC
Q 002256 393 KYIVIIDPGIGVNSSYGVYQRGIANDVFIK-YEGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHELVPVDGLWIDM 471 (946)
Q Consensus 393 k~v~iidP~I~~~~~y~~y~~g~~~~~fik-~~g~~~~g~~WpG~~~~pDf~np~a~~ww~~~~~~~~~~~g~dg~W~Dm 471 (946)
|+++|++|+|..+++|++|++|+++|+||| .+|+++++.+|||.+++||||||+|++||.+++++++ +.|+||||+||
T Consensus 79 ~~~~~~~P~v~~~~~~~~~~e~~~~g~~v~~~~g~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~-~~Gvdg~w~D~ 157 (339)
T cd06604 79 KVVTIIDPGVKVDPGYDVYEEGLENDYFVKDPDGELYIGRVWPGLSAFPDFTNPKVREWWGSLYKKFV-DLGVDGIWNDM 157 (339)
T ss_pred EEEEEEeCceeCCCCChHHHHHHHCCeEEECCCCCEEEEEecCCCccccCCCChHHHHHHHHHHHHHh-hCCCceEeecC
Confidence 999999999998878999999999999999 5799999999999999999999999999999999887 47999999999
Q ss_pred CCCcccCCCcccCCCCCCCCCCCCCCccccccCCCcccCCCCCCCcccccCCCccccccccccccccccCC---cccccc
Q 002256 472 NEASNFCSGLCKIPKGKQCPTGTGPGWVCCLDCKNITKTRWDDPPYKINASGLQVPIGFKTIATSAYHYNG---VLEYDA 548 (946)
Q Consensus 472 nEps~F~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ppy~~~~~g~~~~l~~~ti~~~~~h~~g---~~~~~~ 548 (946)
|||++|+... ..|+|+++.|+.+ ..++++
T Consensus 158 ~Ep~~~~~~~------------------------------------------------~~~~p~~~~~~~~~~~~~~~~~ 189 (339)
T cd06604 158 NEPAVFNTPG------------------------------------------------KTTMPRDAVHRLDGGGGTHEEV 189 (339)
T ss_pred CCccccCCcc------------------------------------------------cccCCccceeeCCCCCCcHhHh
Confidence 9999886420 0145677777644 478999
Q ss_pred ccchhhHHHHHHHHHHHhcc-CCCccEEeccccCCCCCceeeeCCCCCCChHHHHHhHHhhhcccccCCceeeccccccC
Q 002256 549 HSIYGFSQSIATHKALLGLE-GKRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFY 627 (946)
Q Consensus 549 HNlYg~~~~~at~~~l~~~~-~kRpfilsRS~f~Gs~ry~~~WtGDn~s~W~~L~~sI~~~L~~~l~Gip~~G~DIgGF~ 627 (946)
||+|++++++|+++++++.. ++|||+++||+|+|+|||+++|+||+.++|++|+.+|+++|++|++|+||+|+|||||.
T Consensus 190 hn~y~~~~~~a~~~~~~~~~~~~r~~~~sRs~~~G~qry~~~W~GD~~ssW~~L~~~i~~~l~~~l~G~~~~g~DIGGf~ 269 (339)
T cd06604 190 HNVYGLLMARATYEGLKKARPNERPFILTRAGYAGIQRYAAVWTGDNRSSWEHLRLSIPMLLNLGLSGVPFVGADIGGFG 269 (339)
T ss_pred cchhhHHHHHHHHHHHHHhCCCCCcEEEEecccccccccccccCCcccCCHHHHHHHHHHHHHHHhcCCcccccccCCCC
Confidence 99999999999999999876 89999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHhccccceeccCCCCCCCCcccccc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q 002256 628 PAPTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQW-ESVAESARNALGMRYKLLPFLYTLNYEAHLSG 696 (946)
Q Consensus 628 g~~~~EL~~RW~QlgaF~Pf~R~H~~~~~~~qeP~~~-~~~~~~~r~ai~lRY~LLPYlYtl~~~a~~~G 696 (946)
+++++|||+||+|+|||+|+||+|+..+..+||||.| +++.+++|+++++||+|||||||++++||++|
T Consensus 270 ~~~~~EL~~RW~Q~g~f~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~~~lRy~LlPY~ysl~~~a~~tG 339 (339)
T cd06604 270 GDPSPELLVRWMQLGAFFPFFRNHSAKGTRDQEPWAFGEEVEEIAREAIKLRYRLLPYLYTLFWEASETG 339 (339)
T ss_pred CCCCHHHHHHHHHHHhccchhhccCCCCCCCCCCeecChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 9999999999999999999999999988899999999 56889999999999999999999999999998
No 11
>cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II. MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal do
Probab=100.00 E-value=1.4e-88 Score=755.99 Aligned_cols=314 Identities=40% Similarity=0.790 Sum_probs=301.8
Q ss_pred CCCCCCCcccccceeccCCCCCHHHHHHHHHHHHHcCCCceEEEecCCCCCCceeeeeCCCCCCChhHHHHHHHHHHcCC
Q 002256 313 GRPAPMPYWSLGFHQCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDHMDGHKDFTLNPTNYPRPKLLAFLEKIHKIGM 392 (946)
Q Consensus 313 G~p~lpP~WalG~hq~r~gY~~~~~v~~vv~~~~~~~IPlD~iw~Didym~~~~~Ft~d~~~FP~p~l~~~v~~Lh~~g~ 392 (946)
|+|+|||+||||||||||+|+++++|+++++++++++||+|+||+|++||+++++|+||+++||+|+ +|+++||++|+
T Consensus 1 G~~~lpP~walG~~~sr~~y~~~~~v~~~~~~~~~~~iP~d~i~lD~~~~~~~~~f~~d~~~FPdp~--~~i~~l~~~g~ 78 (317)
T cd06600 1 GKPALPPMWALGYHISRYSYYPQDKVVEVVDIMQKEGFPYDVVFLDIHYMDSYRLFTWDPYRFPEPK--KLIDELHKRNV 78 (317)
T ss_pred CCCCCCchHHHHHHhcCCCCCCHHHHHHHHHHHHHcCCCcceEEEChhhhCCCCceeechhcCCCHH--HHHHHHHHCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999987 99999999999
Q ss_pred EEEEEeCCCCccCCCcHHhHhcccCcEEEe-eCCcceEEEecCCcccccCCCCHHHHHHHHHHHHHhhccCCccEEEEeC
Q 002256 393 KYIVIIDPGIGVNSSYGVYQRGIANDVFIK-YEGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHELVPVDGLWIDM 471 (946)
Q Consensus 393 k~v~iidP~I~~~~~y~~y~~g~~~~~fik-~~g~~~~g~~WpG~~~~pDf~np~a~~ww~~~~~~~~~~~g~dg~W~Dm 471 (946)
|+++|++|+|..++.+..|.+|.++++||| .+|+++++.+|||.+++||||||+|++||.+++++++.+.|+||||+||
T Consensus 79 k~~~~~~P~i~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~w~G~~~~~Dftnp~a~~ww~~~~~~~~~~~gvdg~w~D~ 158 (317)
T cd06600 79 KLVTIVDPGIRVDQNYSPFLSGMDKGKFCEIESGELFVGKMWPGTTVYPDFTNPDTREWWAGLFSEWLNSQGVDGIWLDM 158 (317)
T ss_pred EEEEEeeccccCCCCChHHHHHHHCCEEEECCCCCeEEEeecCCCccccCCCChHHHHHHHHHHHHHhhcCCCceEEeeC
Confidence 999999999998877899999999999999 4789999999999999999999999999999999998789999999999
Q ss_pred CCCcccCCCcccCCCCCCCCCCCCCCccccccCCCcccCCCCCCCcccccCCCccccccccccccccccCCccccccccc
Q 002256 472 NEASNFCSGLCKIPKGKQCPTGTGPGWVCCLDCKNITKTRWDDPPYKINASGLQVPIGFKTIATSAYHYNGVLEYDAHSI 551 (946)
Q Consensus 472 nEps~F~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ppy~~~~~g~~~~l~~~ti~~~~~h~~g~~~~~~HNl 551 (946)
|||++| +++||+
T Consensus 159 ~Ep~~~--------------------------------------------------------------------~~~hn~ 170 (317)
T cd06600 159 NEPSDF--------------------------------------------------------------------EKVHNL 170 (317)
T ss_pred CCCccH--------------------------------------------------------------------HHhcch
Confidence 998632 357999
Q ss_pred hhhHHHHHHHHHHHhcc-CCCccEEeccccCCCCCceeeeCCCCCCChHHHHHhHHhhhcccccCCceeeccccccCCCC
Q 002256 552 YGFSQSIATHKALLGLE-GKRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPAP 630 (946)
Q Consensus 552 Yg~~~~~at~~~l~~~~-~kRpfilsRS~f~Gs~ry~~~WtGDn~s~W~~L~~sI~~~L~~~l~Gip~~G~DIgGF~g~~ 630 (946)
||+++++|+++++++.. ++|||++|||+|+|+|||+++|+||+.|+|++|+.+|+++|++||+|+||+|+|||||.|++
T Consensus 171 y~~~~~~a~~~~~~~~~~~~r~~~~sRs~~~G~qry~~~W~GD~~s~W~~L~~~i~~~l~~gl~G~p~~g~DiGGf~~~~ 250 (317)
T cd06600 171 YGLYEAMATAEGFRTSHPRNRIFILTRSGFAGSQKYAAIWTGDNTASWDDLKLSIPLVLGLSISGIPFVGCDIGGFQGDN 250 (317)
T ss_pred hhHHHHHHHHHHHHHhcCCCCceEEEeccccccCCccceECCcccccHHHHHHHHHHHHHHHhcCCCccCcccCCCCCCC
Confidence 99999999999998864 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHhccccceeccCCCCCCCCcccccchH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q 002256 631 TEELCNRWIEVGAFYPFSRDHANYYSPRQELYQWES-VAESARNALGMRYKLLPFLYTLNYEAHLSG 696 (946)
Q Consensus 631 ~~EL~~RW~QlgaF~Pf~R~H~~~~~~~qeP~~~~~-~~~~~r~ai~lRY~LLPYlYtl~~~a~~~G 696 (946)
++|||+||+|+|||+|+||+|+.....+||||.|++ +.+++|+++++||+|||||||++++||++|
T Consensus 251 ~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~~~lRy~LlPYlytl~~~a~~~G 317 (317)
T cd06600 251 SMELLVRWYQLGAFFPFYRSHKATDGKDTEPVFFPDYYKEKVREIVELRYKLLPYLYTLFLRAHEKG 317 (317)
T ss_pred CHHHHHHHHHHhhcCceeeccCCCCCCCCCCeecCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999988888999999964 779999999999999999999999999998
No 12
>cd06601 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end. GLases cleave the bond between C1 and O1 of the nonreducing sugar residue of alpha-glucans to generate a monosaccharide product with a double bond between C1 and C2. This family corresponds to subgroup 2 in the Ernst et al classification of GH31 enzymes.
Probab=100.00 E-value=1.1e-83 Score=716.65 Aligned_cols=300 Identities=32% Similarity=0.591 Sum_probs=264.0
Q ss_pred CCCCCCCcccccceeccCCCCCHHHHHHHHHHHHHcCCCceEEEecCCCCCCceeeeeCCCCCCChhHHHHHHHHHHcCC
Q 002256 313 GRPAPMPYWSLGFHQCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDHMDGHKDFTLNPTNYPRPKLLAFLEKIHKIGM 392 (946)
Q Consensus 313 G~p~lpP~WalG~hq~r~gY~~~~~v~~vv~~~~~~~IPlD~iw~Didym~~~~~Ft~d~~~FP~p~l~~~v~~Lh~~g~ 392 (946)
|+|+|||+||||||||||+|+++++|++|+++||+++||||+||+|||||+++++||||+++||+|+ +|+++||++|+
T Consensus 1 G~p~mpP~WalG~~qsr~~Y~~~~ev~~v~~~~r~~~IP~D~i~lDidy~~~~~~Ft~d~~~FPdp~--~mv~~L~~~G~ 78 (332)
T cd06601 1 GRSKLKPRYALGFHQGCYGYSNRSDLEEVVEGYRDNNIPLDGLHVDVDFQDNYRTFTTNGGGFPNPK--EMFDNLHNKGL 78 (332)
T ss_pred CCCCCCchHHhhhhhCCCCCCCHHHHHHHHHHHHHcCCCCceEEEcCchhcCCCceeecCCCCCCHH--HHHHHHHHCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999987 99999999999
Q ss_pred EEEEEeCCCCccCCCcHHhHhcccCcEEEeeCCcceEEEecCCcccccCCCCHHHHHHHHHHHHHhhccCCccEEEEeCC
Q 002256 393 KYIVIIDPGIGVNSSYGVYQRGIANDVFIKYEGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHELVPVDGLWIDMN 472 (946)
Q Consensus 393 k~v~iidP~I~~~~~y~~y~~g~~~~~fik~~g~~~~g~~WpG~~~~pDf~np~a~~ww~~~~~~~~~~~g~dg~W~Dmn 472 (946)
|+|+|++|+|+ .|.+||+.++||||+||++++||.++++.+++ .|+||||+|||
T Consensus 79 klv~~i~P~i~-------------------------~g~~~~~~~~~pDftnp~ar~wW~~~~~~l~~-~Gv~~~W~Dmn 132 (332)
T cd06601 79 KCSTNITPVIS-------------------------YGGGLGSPGLYPDLGRPDVREWWGNQYKYLFD-IGLEFVWQDMT 132 (332)
T ss_pred eEEEEecCcee-------------------------cCccCCCCceeeCCCCHHHHHHHHHHHHHHHh-CCCceeecCCC
Confidence 99999999998 13578889999999999999999999888776 59999999999
Q ss_pred CCcccCCCcccCCCCCCCCCCCCCCccccccCCCcccCCCCCCCcccccCCCccccccccccccccccCCccccccccch
Q 002256 473 EASNFCSGLCKIPKGKQCPTGTGPGWVCCLDCKNITKTRWDDPPYKINASGLQVPIGFKTIATSAYHYNGVLEYDAHSIY 552 (946)
Q Consensus 473 Eps~F~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ppy~~~~~g~~~~l~~~ti~~~~~h~~g~~~~~~HNlY 552 (946)
||++|+.... ....| +-.+...+ .... +..+..|+++||+|
T Consensus 133 Ep~~~~~~~~----~~~~p------------------------~~~~~~~~----------~~~~-~~~~~~~~~~hN~Y 173 (332)
T cd06601 133 TPAIMPSYGD----MKGFP------------------------PRLLVTDD----------SYEN-NVKRKPAIELWNLY 173 (332)
T ss_pred CcccccCCCc----cCCCC------------------------CcccccCC----------cccc-ccCCchHHHHhhhh
Confidence 9999975210 00011 00000000 0000 12234689999999
Q ss_pred hhHHHHHHHHHHHhc---cCCCccEEeccccCCCCCceeeeCCCCCCChHHHHHhHHhhhcccccCCceeeccccccCCC
Q 002256 553 GFSQSIATHKALLGL---EGKRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPA 629 (946)
Q Consensus 553 g~~~~~at~~~l~~~---~~kRpfilsRS~f~Gs~ry~~~WtGDn~s~W~~L~~sI~~~L~~~l~Gip~~G~DIgGF~g~ 629 (946)
|+++++|+++++++. +++||||||||+|+|+|||+++|+|||.|+|++|+.||+++|++||+||||||+|||||.|+
T Consensus 174 ~~~~~~a~~e~~~~~~~~~~~RpfiltRS~~aGsqrY~~~WsGDn~stW~~L~~si~~~L~~~lsGip~~g~DIGGF~g~ 253 (332)
T cd06601 174 SYNLHKATWHGLNNLNARKNKRNFIIGRGSYAGMQRFAGLWTGDNSSSWDFLQINIAQVLNLGMSGLPIAGSDIGGFTSY 253 (332)
T ss_pred HHHHHHHHHHHHHHhhcCCCCCcEEEEecCcCccCCcCceeCCCcccCHHHHHHHHHHHHHhhhcCCCccCCccCCcCCC
Confidence 999999999999765 57999999999999999999999999999999999999999999999999999999999997
Q ss_pred ----------CChhHHHHHHHhccccceeccCCCCC--CCCccc-----------------ccchHHHHHHHHHHHHHH
Q 002256 630 ----------PTEELCNRWIEVGAFYPFSRDHANYY--SPRQEL-----------------YQWESVAESARNALGMRY 679 (946)
Q Consensus 630 ----------~~~EL~~RW~QlgaF~Pf~R~H~~~~--~~~qeP-----------------~~~~~~~~~~r~ai~lRY 679 (946)
+++|||+||+|+|||+||||+|+... +..||| |.|+++++++|++|++||
T Consensus 254 ~~~~~~~~~~~~~EL~~RW~Q~GaF~P~~R~H~~~~~~~~~~ep~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~~Ry 332 (332)
T cd06601 254 DGENSIQRTWCNPELLIRWYQAGFLLPWFRNHYDRKIRQKFQEPAKYFQEPYAHLIDYEQLYLYENVPEICRKYVELRY 332 (332)
T ss_pred CcccccccCCCCHHHHHHHHHHhcCCceeccCCCCccCcccCCcccccccccccccccccccccHHHHHHHHHHHHhcC
Confidence 68999999999999999999999754 578888 788889999999999998
No 13
>cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY. CtsZ and CtsY both have a glycosyl hydrolase family 31 (GH31) catalytic domain. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=100.00 E-value=2.9e-78 Score=673.42 Aligned_cols=304 Identities=28% Similarity=0.514 Sum_probs=279.8
Q ss_pred CCCCCCCcccccceeccCCCCCHHHHHHHHHHHHHcCCCceEEEecCCCCC------CceeeeeCCCCCCChhHHHHHHH
Q 002256 313 GRPAPMPYWSLGFHQCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDHMD------GHKDFTLNPTNYPRPKLLAFLEK 386 (946)
Q Consensus 313 G~p~lpP~WalG~hq~r~gY~~~~~v~~vv~~~~~~~IPlD~iw~Didym~------~~~~Ft~d~~~FP~p~l~~~v~~ 386 (946)
|+|+|||+||||||||||+|+++++|++++++|++++||||+||+|++||+ .+++||||+++||+|+ +|+++
T Consensus 1 G~~~l~P~wa~G~~~s~~~y~~~~~v~~~~~~~~~~~iP~d~i~lD~~w~~~~~~~~~~~~f~wd~~~FPdp~--~mi~~ 78 (317)
T cd06598 1 GRQPLPPRWALGNWASRFGYRNWQEVDDTIKTLREKDFPLDAAILDLYWFGKDIDKGHMGNLDWDRKAFPDPA--GMIAD 78 (317)
T ss_pred CCCCCCchHHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCceEEEEechhhcCcccCCceeeeEeccccCCCHH--HHHHH
Confidence 899999999999999999999999999999999999999999999999997 4679999999999987 99999
Q ss_pred HHHcCCEEEEEeCCCCccCCCcHHhHhcccCcEEEe--eCCcceEEEecCCcccccCCCCHHHHHHHHHHHHHhhccCCc
Q 002256 387 IHKIGMKYIVIIDPGIGVNSSYGVYQRGIANDVFIK--YEGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHELVPV 464 (946)
Q Consensus 387 Lh~~g~k~v~iidP~I~~~~~y~~y~~g~~~~~fik--~~g~~~~g~~WpG~~~~pDf~np~a~~ww~~~~~~~~~~~g~ 464 (946)
||++|+|+++|++|+|+.+ .+.|+++.++|++++ .+|+++++.+|||.+++||||||+|++||.++++++. +.|+
T Consensus 79 L~~~G~k~~~~v~P~v~~~--~~~y~e~~~~g~l~~~~~~~~~~~~~~w~g~~~~~Dftnp~a~~w~~~~~~~~~-~~Gv 155 (317)
T cd06598 79 LAKKGVKTIVITEPFVLKN--SKNWGEAVKAGALLKKDQGGVPTLFDFWFGNTGLIDWFDPAAQAWFHDNYKKLI-DQGV 155 (317)
T ss_pred HHHcCCcEEEEEcCcccCC--chhHHHHHhCCCEEEECCCCCEeeeeccCCCccccCCCCHHHHHHHHHHHHHhh-hCCc
Confidence 9999999999999999865 478999999999665 3589999999999999999999999999999999874 5799
Q ss_pred cEEEEeCCCCcccCCCcccCCCCCCCCCCCCCCccccccCCCcccCCCCCCCcccccCCCccccccccccccccccCCcc
Q 002256 465 DGLWIDMNEASNFCSGLCKIPKGKQCPTGTGPGWVCCLDCKNITKTRWDDPPYKINASGLQVPIGFKTIATSAYHYNGVL 544 (946)
Q Consensus 465 dg~W~DmnEps~F~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ppy~~~~~g~~~~l~~~ti~~~~~h~~g~~ 544 (946)
||||+|||||+.|... +.|++| .
T Consensus 156 dg~w~D~~Ep~~~~~~--------------------------------------------------------~~~~~g-~ 178 (317)
T cd06598 156 TGWWGDLGEPEVHPPD--------------------------------------------------------MCHHKG-K 178 (317)
T ss_pred cEEEecCCCccccCCc--------------------------------------------------------cccCCC-c
Confidence 9999999999865421 123333 4
Q ss_pred ccccccchhhHHHHHHHHHHHhc-cCCCccEEeccccCCCCCce-eeeCCCCCCChHHHHHhHHhhhcccccCCceeecc
Q 002256 545 EYDAHSIYGFSQSIATHKALLGL-EGKRPFILSRSTFVGSGHYA-AHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSD 622 (946)
Q Consensus 545 ~~~~HNlYg~~~~~at~~~l~~~-~~kRpfilsRS~f~Gs~ry~-~~WtGDn~s~W~~L~~sI~~~L~~~l~Gip~~G~D 622 (946)
+.++||+|++++++++++++++. +++|||+++||+|+|+|||+ ++|+||+.++|++|+.+|+++|++|++|+||+|+|
T Consensus 179 ~~~~hN~y~~~~~~~~~e~~~~~~~~~r~~~~~Rs~~~Gsqry~~~~WsGD~~s~W~~L~~~i~~~l~~~l~G~~~~g~D 258 (317)
T cd06598 179 AAEVHNIYGHLWAKSIYEGYQQNYPNERPFILMRAGFAGSQRYGVIPWSGDVGRTWDGLKSQPNAALQMSMSGIDYYHSD 258 (317)
T ss_pred HhHHhhHHHHHHHHHHHHHHHHhcCCCCeEEEEecCcCccccCcCCccCCCCcCCHHHHHHHHHHHHhhhccCCcccCCC
Confidence 67899999999999999999875 57999999999999999998 58999999999999999999999999999999999
Q ss_pred ccccCCC--CChhHHHHHHHhccccceeccCCCCCCCCcccccch-HHHHHHHHHHHHHH
Q 002256 623 ICGFYPA--PTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQWE-SVAESARNALGMRY 679 (946)
Q Consensus 623 IgGF~g~--~~~EL~~RW~QlgaF~Pf~R~H~~~~~~~qeP~~~~-~~~~~~r~ai~lRY 679 (946)
||||.|+ +++|||+||+|+|||+|+||+|+..+ .++|||.|+ ++.+++|++|++||
T Consensus 259 IGGf~~~~~~~~EL~~RW~q~g~f~P~~R~H~~~~-~~~ePw~~~~~~~~~~r~~~~lRY 317 (317)
T cd06598 259 IGGFAGGDELDPELYTRWFQYGAFDPPFRPHAQNA-IPPEPVFYSIGTKNINRENIRLRY 317 (317)
T ss_pred cCCcCCCCCCCHHHHHHHHHhccCCcccccCCCCC-CCCCCCcCChHHHHHHHHHHHhhC
Confidence 9999998 99999999999999999999999875 578999995 58999999999998
No 14
>cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose. YicI forms a homohexamer (a trimer of dimers). All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The YicI family corresponds to subgroup 4 in the Ernst et al classification of GH31 enzymes.
Probab=100.00 E-value=1e-77 Score=667.66 Aligned_cols=303 Identities=26% Similarity=0.518 Sum_probs=284.2
Q ss_pred CCCCCCCcccccceeccCCCCCHHHHHHHHHHHHHcCCCceEEEecCCCCCCce--eeeeCCCCCCChhHHHHHHHHHHc
Q 002256 313 GRPAPMPYWSLGFHQCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDHMDGHK--DFTLNPTNYPRPKLLAFLEKIHKI 390 (946)
Q Consensus 313 G~p~lpP~WalG~hq~r~gY~~~~~v~~vv~~~~~~~IPlD~iw~Didym~~~~--~Ft~d~~~FP~p~l~~~v~~Lh~~ 390 (946)
|+|+|||+||||||||||+|.++++++++++++++++||||+||+|++||++++ +|+||+++||+|+ +|+++||++
T Consensus 1 G~~~l~P~wa~G~~~~~~~y~~~~~v~~~~~~~~~~~iP~d~~~lD~~w~~~~~~~~f~~d~~~FPd~~--~~i~~l~~~ 78 (308)
T cd06593 1 GRPALPPAWSFGLWLSRSFYYDEEEVNEFADGMRERNLPCDVIHLDCFWMKEFQWCDFEFDPDRFPDPE--GMLSRLKEK 78 (308)
T ss_pred CCCCCCchHHHHHHHHcccCCCHHHHHHHHHHHHHcCCCeeEEEEecccccCCcceeeEECcccCCCHH--HHHHHHHHC
Confidence 899999999999999999999999999999999999999999999999999877 9999999999976 999999999
Q ss_pred CCEEEEEeCCCCccCCCcHHhHhcccCcEEEe-eCCcceEEEecCCcccccCCCCHHHHHHHHHHHHHhhccCCccEEEE
Q 002256 391 GMKYIVIIDPGIGVNSSYGVYQRGIANDVFIK-YEGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHELVPVDGLWI 469 (946)
Q Consensus 391 g~k~v~iidP~I~~~~~y~~y~~g~~~~~fik-~~g~~~~g~~WpG~~~~pDf~np~a~~ww~~~~~~~~~~~g~dg~W~ 469 (946)
|+|+++|++|+|..+ .++|+++.++|+||| .+|+++.+.+|||.+++|||+||+|++||.++++++.+ .|+||+|+
T Consensus 79 G~~~~~~~~P~i~~~--~~~~~e~~~~g~~v~~~~g~~~~~~~w~g~~~~~Dftnp~a~~w~~~~~~~~~~-~Gid~~~~ 155 (308)
T cd06593 79 GFKVCLWINPYIAQK--SPLFKEAAEKGYLVKKPDGSVWQWDLWQPGMGIIDFTNPDACKWYKDKLKPLLD-MGVDCFKT 155 (308)
T ss_pred CCeEEEEecCCCCCC--chhHHHHHHCCeEEECCCCCeeeecccCCCcccccCCCHHHHHHHHHHHHHHHH-hCCcEEec
Confidence 999999999999865 468999999999999 57899999999999999999999999999999998876 79999999
Q ss_pred eCCCCcccCCCcccCCCCCCCCCCCCCCccccccCCCcccCCCCCCCcccccCCCccccccccccccccccCCccccccc
Q 002256 470 DMNEASNFCSGLCKIPKGKQCPTGTGPGWVCCLDCKNITKTRWDDPPYKINASGLQVPIGFKTIATSAYHYNGVLEYDAH 549 (946)
Q Consensus 470 DmnEps~F~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ppy~~~~~g~~~~l~~~ti~~~~~h~~g~~~~~~H 549 (946)
||||+. |.++.|++|..++++|
T Consensus 156 D~~e~~----------------------------------------------------------p~~~~~~~g~~~~~~h 177 (308)
T cd06593 156 DFGERI----------------------------------------------------------PTDVVYYDGSDGEKMH 177 (308)
T ss_pred CCCCCC----------------------------------------------------------CccccccCCCCcceee
Confidence 999962 1123456777889999
Q ss_pred cchhhHHHHHHHHHHHhccC-CCccEEeccccCCCCCceeeeCCCCCCChHHHHHhHHhhhcccccCCceeeccccccCC
Q 002256 550 SIYGFSQSIATHKALLGLEG-KRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYP 628 (946)
Q Consensus 550 NlYg~~~~~at~~~l~~~~~-kRpfilsRS~f~Gs~ry~~~WtGDn~s~W~~L~~sI~~~L~~~l~Gip~~G~DIgGF~g 628 (946)
|+|++++++++++++++..+ +|||++|||+|+|+|||+++|+||+.++|++|+.+|+++|++|++|+|++|+|||||.+
T Consensus 178 n~y~~~~~~~~~~~~~~~~~~~r~~~~~Rs~~~Gsqry~~~w~GD~~s~w~~L~~~i~~~l~~~l~G~~~~g~DigGf~~ 257 (308)
T cd06593 178 NYYALLYNKAVYEATKEVKGEGEAVVWARSAWAGSQKYPVHWGGDCESTFEGMAESLRGGLSLGLSGFGFWSHDIGGFEG 257 (308)
T ss_pred eHHHHHHHHHHHHHHHHhcCCCCeEEEEcCCccccccCCCEECCCcccCHHHHHHHHHHHHhccccCCceecCccCCcCC
Confidence 99999999999999998764 68999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHhccccceeccCCCCCCCCcccccch-HHHHHHHHHHHHHHHH
Q 002256 629 APTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQWE-SVAESARNALGMRYKL 681 (946)
Q Consensus 629 ~~~~EL~~RW~QlgaF~Pf~R~H~~~~~~~qeP~~~~-~~~~~~r~ai~lRY~L 681 (946)
++++|||+||+|+|||+|+||+|+.. .||||.|+ ++.+++|+++++||+|
T Consensus 258 ~~~~EL~~RW~q~gaf~P~~r~h~~~---~~~Pw~~~~~~~~~~r~~~~lRy~L 308 (308)
T cd06593 258 TPPPDLYKRWAQFGLLSSHSRLHGSG---YREPWEYGEEAVDVVRKFAKLKYRL 308 (308)
T ss_pred CCCHHHHHHHHHhCcCCcccccCCCC---CCCCcccChHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999874 89999996 6899999999999997
No 15
>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate. XylS has been characterized in Sulfolobus solfataricus where it hydrolyzes isoprimeverose, the p-nitrophenyl-beta derivative of isoprimeverose, and xyloglucan oligosaccharides, and has transxylosidic activity. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The XylS family corresponds to subgroup 3 in the Ernst et al classification of GH31 enzymes.
Probab=100.00 E-value=2e-76 Score=659.17 Aligned_cols=301 Identities=27% Similarity=0.493 Sum_probs=270.4
Q ss_pred CCCCCCCcccccceeccCCCCCHHHHHHHHHHHHHcCCCceEEEecCCCCCCce--eeeeCCCCCCChhHHHHHHHHHHc
Q 002256 313 GRPAPMPYWSLGFHQCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDHMDGHK--DFTLNPTNYPRPKLLAFLEKIHKI 390 (946)
Q Consensus 313 G~p~lpP~WalG~hq~r~gY~~~~~v~~vv~~~~~~~IPlD~iw~Didym~~~~--~Ft~d~~~FP~p~l~~~v~~Lh~~ 390 (946)
|||+|||+||||||||||+|+++++|+++++++++++||||+||+|++||++++ +||||+++||+|+ +||++||++
T Consensus 1 G~~~m~P~walG~~~sr~~y~~~~ev~~~~~~~~~~~iP~d~i~lD~~~~~~~~~~~f~~d~~~FPdp~--~mi~~L~~~ 78 (319)
T cd06591 1 GKAPMMPKWAYGFWQSKERYKTQEELLDVAKEYRKRGIPLDVIVQDWFYWPKQGWGEWKFDPERFPDPK--AMVRELHEM 78 (319)
T ss_pred CCCCCCchHHHHHHHhcccCCCHHHHHHHHHHHHHhCCCccEEEEechhhcCCCceeEEEChhhCCCHH--HHHHHHHHC
Confidence 899999999999999999999999999999999999999999999999999888 9999999999987 999999999
Q ss_pred CCEEEEEeCCCCccCCCcHHhHhcccCcEEEee-CCcceEEEecCCcccccCCCCHHHHHHHHHHHHHhhccCCccEEEE
Q 002256 391 GMKYIVIIDPGIGVNSSYGVYQRGIANDVFIKY-EGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHELVPVDGLWI 469 (946)
Q Consensus 391 g~k~v~iidP~I~~~~~y~~y~~g~~~~~fik~-~g~~~~g~~WpG~~~~pDf~np~a~~ww~~~~~~~~~~~g~dg~W~ 469 (946)
|+|+++|++|+|+. ++..|++++++++|||. +|+++. .+|||.+++||||||+|++||.+++++.+.+.|+||||+
T Consensus 79 G~kv~~~i~P~v~~--~~~~y~e~~~~g~~v~~~~g~~~~-~~w~g~~~~~Dftnp~a~~w~~~~~~~~~~~~Gvdg~w~ 155 (319)
T cd06591 79 NAELMISIWPTFGP--ETENYKEMDEKGYLIKTDRGPRVT-MQFGGNTRFYDATNPEAREYYWKQLKKNYYDKGVDAWWL 155 (319)
T ss_pred CCEEEEEecCCcCC--CChhHHHHHHCCEEEEcCCCCeee-eeCCCCccccCCCCHHHHHHHHHHHHHHhhcCCCcEEEe
Confidence 99999999999985 46889999999999994 677776 899999999999999999999999887777789999999
Q ss_pred eCCCCcccCCCcccCCCCCCCCCCCCCCccccccCCCcccCCCCCCCcccccCCCccccccccccccccccCCccccccc
Q 002256 470 DMNEASNFCSGLCKIPKGKQCPTGTGPGWVCCLDCKNITKTRWDDPPYKINASGLQVPIGFKTIATSAYHYNGVLEYDAH 549 (946)
Q Consensus 470 DmnEps~F~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ppy~~~~~g~~~~l~~~ti~~~~~h~~g~~~~~~H 549 (946)
|||||+.|+...| +....+....++++|
T Consensus 156 D~~Ep~~~~~~~~----------------------------------------------------~~~~~~~~~~~~~~h 183 (319)
T cd06591 156 DAAEPEYSVYDFG----------------------------------------------------LDNYRYHLGPGLEVG 183 (319)
T ss_pred cCCCCCccCCccc----------------------------------------------------ccCcccCCCCchhhh
Confidence 9999997753200 000011122567899
Q ss_pred cchhhHHHHHHHHHHHhcc-CCCccEEeccccCCCCCce-eeeCCCCCCChHHHHHhHHhhhcccccCCceeeccccccC
Q 002256 550 SIYGFSQSIATHKALLGLE-GKRPFILSRSTFVGSGHYA-AHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFY 627 (946)
Q Consensus 550 NlYg~~~~~at~~~l~~~~-~kRpfilsRS~f~Gs~ry~-~~WtGDn~s~W~~L~~sI~~~L~~~l~Gip~~G~DIgGF~ 627 (946)
|+|++++++++++++++.. ++|||+++||+|+|+|||+ .+|+||+.|+|++||.+|+++|++||+|+||+|+|||||.
T Consensus 184 N~y~~~~~~~~~e~~~~~~~~~r~f~~sRs~~~Gsqry~~~~W~GD~~s~w~~L~~~i~~~l~~glsG~~~~g~DiGGF~ 263 (319)
T cd06591 184 NAYPLMHAKGIYEGQRAAGDEKRVVILTRSAWAGSQRYGALVWSGDIDSSWETLRRQIAAGLNMGLSGIPWWTTDIGGFF 263 (319)
T ss_pred hhhHHHHHHHHHHHHHHhCCCCCceEEEeccccccccccCceeCCCccccHHHHHHHHHHHHHHhhcCCccccCCcCCcC
Confidence 9999999999999998775 7999999999999999998 5999999999999999999999999999999999999999
Q ss_pred CCCC---------hhHHHHHHHhccccceeccCCCCCCC-CcccccchH-HHHH
Q 002256 628 PAPT---------EELCNRWIEVGAFYPFSRDHANYYSP-RQELYQWES-VAES 670 (946)
Q Consensus 628 g~~~---------~EL~~RW~QlgaF~Pf~R~H~~~~~~-~qeP~~~~~-~~~~ 670 (946)
|+++ +|||+||+|+|||+|+||+|+..... .||||.|++ +.++
T Consensus 264 ~~~~~~~~~~~~~~EL~~RW~q~gaf~P~~R~H~~~~~~~~~ePw~~g~e~~~~ 317 (319)
T cd06591 264 VGNPPAGLDDPEYRELYVRWFQFGAFCPVMRSHGTREPREINEFWSYGEEVYDI 317 (319)
T ss_pred CCCccccccCCccHHHHHHHHHHhcCccccccCCCCCCCCCCcCcCCChHHHHh
Confidence 9876 89999999999999999999987653 589999964 4444
No 16
>cd06599 GH31_glycosidase_Aec37 Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37. The gene encoding Aec37 (aec-37) is located within a genomic island (AGI-3) isolated from the extraintestinal avian pathogenic Escherichia coli strain BEN2908. The function of Aec37 and its orthologs is unknown; however, deletion of a region of the genome that includes aec-37 affects the assimilation of seven carbohydrates, decreases growth rate of the strain in minimal medium containing galacturonate or trehalose, and attenuates the virulence of E. coli BEN2908 in chickens. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=100.00 E-value=5.9e-76 Score=654.90 Aligned_cols=303 Identities=30% Similarity=0.556 Sum_probs=269.8
Q ss_pred CCCCCCCcccccceeccCCCCC-----HHHHHHHHHHHHHcCCCceEEEecCCCCCC----ceeeeeCCCCCCChhHHHH
Q 002256 313 GRPAPMPYWSLGFHQCRWGYHN-----LSVVEDVVENYKKAKIPLDVIWNDDDHMDG----HKDFTLNPTNYPRPKLLAF 383 (946)
Q Consensus 313 G~p~lpP~WalG~hq~r~gY~~-----~~~v~~vv~~~~~~~IPlD~iw~Didym~~----~~~Ft~d~~~FP~p~l~~~ 383 (946)
|+|+|||+||||||||||+|++ +++|+++++++|+++||+|+||+|++|++. +++|+||+++||+|+ +|
T Consensus 1 G~~~mpP~walG~~~sr~~Y~~~~~~~q~~v~~~~~~~r~~~iP~d~i~ld~~~~~~~~~~~~~f~~d~~~FPdp~--~m 78 (317)
T cd06599 1 GKPAMVPRWSLGYSGSTMYYTELDPDAQEALLEFIDKCREHDIPCDSFHLSSGYTSIEGGKRYVFNWNKDRFPDPA--AF 78 (317)
T ss_pred CCCCCCchHHHHHHhcCCCCCCCCccHHHHHHHHHHHHHHcCCCeeEEEEeccccccCCCceeeeecCcccCCCHH--HH
Confidence 8999999999999999999998 899999999999999999999999999975 678999999999987 99
Q ss_pred HHHHHHcCCEEEEEeCCCCccCCCcHHhHhcccCcEEEee-CC-cceEEEecCCcccccCCCCHHHHHHHHHHHHHhhcc
Q 002256 384 LEKIHKIGMKYIVIIDPGIGVNSSYGVYQRGIANDVFIKY-EG-EPYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHEL 461 (946)
Q Consensus 384 v~~Lh~~g~k~v~iidP~I~~~~~y~~y~~g~~~~~fik~-~g-~~~~g~~WpG~~~~pDf~np~a~~ww~~~~~~~~~~ 461 (946)
|++||++|+|+++|++|+|..+ ++.|+++.++++|||. +| .++++.+|||.+++||||||+|++||.+++++.+.+
T Consensus 79 i~~L~~~g~k~~~~i~P~i~~~--~~~y~e~~~~g~~v~~~~g~~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~~ 156 (317)
T cd06599 79 VAKFHERGIRLAPNIKPGLLQD--HPRYKELKEAGAFIKPPDGREPSIGQFWGGVGSFVDFTNPEGREWWKEGVKEALLD 156 (317)
T ss_pred HHHHHHCCCEEEEEeCCcccCC--CHHHHHHHHCCcEEEcCCCCCcceecccCCCeEeecCCChHHHHHHHHHHHHHHhc
Confidence 9999999999999999999864 5789999999999994 44 468999999999999999999999999999777777
Q ss_pred CCccEEEEeCCCCcccCCCcccCCCCCCCCCCCCCCccccccCCCcccCCCCCCCcccccCCCccccccccccccccccC
Q 002256 462 VPVDGLWIDMNEASNFCSGLCKIPKGKQCPTGTGPGWVCCLDCKNITKTRWDDPPYKINASGLQVPIGFKTIATSAYHYN 541 (946)
Q Consensus 462 ~g~dg~W~DmnEps~F~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ppy~~~~~g~~~~l~~~ti~~~~~h~~ 541 (946)
+|+||||+|||||+.+.... .| ...| +
T Consensus 157 ~Gvdg~w~D~~E~~~~~~~~-----------------~~-------------------~~~g-------~---------- 183 (317)
T cd06599 157 LGIDSTWNDNNEYEIWDDDA-----------------VC-------------------DGFG-------K---------- 183 (317)
T ss_pred CCCcEEEecCCCCccCCCcc-----------------ee-------------------cCCC-------C----------
Confidence 89999999999997432210 00 0000 0
Q ss_pred CccccccccchhhHHHHHHHHHHHhc-cCCCccEEeccccCCCCCceeeeCCCCCCChHHHHHhHHhhhcccccCCceee
Q 002256 542 GVLEYDAHSIYGFSQSIATHKALLGL-EGKRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVG 620 (946)
Q Consensus 542 g~~~~~~HNlYg~~~~~at~~~l~~~-~~kRpfilsRS~f~Gs~ry~~~WtGDn~s~W~~L~~sI~~~L~~~l~Gip~~G 620 (946)
+..+.++||+|++++++|+++++++. +++|||+|+||+|+|+|||+++|+||+.|+|++|+.+|+++|++||+|+||+|
T Consensus 184 ~~~~~~~~n~y~~l~~~a~~~~~~~~~~~~r~f~ltRs~~~G~qry~~~WsGD~~s~W~~L~~~i~~~L~~glsG~~~~g 263 (317)
T cd06599 184 PGTIGELRPVQPNLMARASHEAQAEHYPNRRPYIVSRSGFAGIQRYAQTWSGDNRTSWKTLRYNIAMGLGMGLSGVANIG 263 (317)
T ss_pred ccchhhcccchHHHHHHHHHHHHHHhCCCCCcEEEEcCCcccccCCcCeeCCCcccCHHHHHHHHHHHHhhhccCCcccc
Confidence 11233589999999999999999875 57999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCC-CChhHHHHHHHhccccceeccCCCCC-CCCcccccchHHHHHHH
Q 002256 621 SDICGFYPA-PTEELCNRWIEVGAFYPFSRDHANYY-SPRQELYQWESVAESAR 672 (946)
Q Consensus 621 ~DIgGF~g~-~~~EL~~RW~QlgaF~Pf~R~H~~~~-~~~qeP~~~~~~~~~~r 672 (946)
+|||||.++ +++|||+||+|+|+|+|+||+|+..+ ..+||||.|++.++++|
T Consensus 264 ~DIGGF~~~~~~~ELy~RW~Q~g~F~P~~R~H~~~~~~~~~ePw~f~~~~~~~~ 317 (317)
T cd06599 264 HDIGGFAGPAPEPELFVRWVQNGIFQPRFCIHSWNTDNTVTEPWMYPEVTDYIR 317 (317)
T ss_pred cccCccCCCCCCHHHHHHHHHHccCCHhhhcccCCCCCCCcCCeecccchhhcC
Confidence 999999987 89999999999999999999999764 36899999988777654
No 17
>cd06597 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide-synthesizing enzyme Y) is a bacterial 3-alpha-isomaltosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsZ. CtsY and CtsZ both have a glycosyl hydrolase family 31 (GH31) catalytic domain. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=100.00 E-value=2.1e-75 Score=654.91 Aligned_cols=294 Identities=22% Similarity=0.417 Sum_probs=263.5
Q ss_pred CCCCCCCcccccceeccCCCCCHHHHHHHHHHHHHcCCCceEEEec-------------CCCC--CCce-----eeeeCC
Q 002256 313 GRPAPMPYWSLGFHQCRWGYHNLSVVEDVVENYKKAKIPLDVIWND-------------DDHM--DGHK-----DFTLNP 372 (946)
Q Consensus 313 G~p~lpP~WalG~hq~r~gY~~~~~v~~vv~~~~~~~IPlD~iw~D-------------idym--~~~~-----~Ft~d~ 372 (946)
|||+|||+||||||||||+|+++++|+++++++++++||||+||+| |||| ++++ +|+||+
T Consensus 1 G~p~lpP~walG~~~sr~~Y~~~~ev~~v~~~~~~~~iP~d~i~lD~W~~~~~~~~w~d~~y~~~~~~~~~~~~~~~f~~ 80 (340)
T cd06597 1 GKPELLPKWAFGLWMSANEWDTQAEVMRQMDAHEEHGIPVTVVVIEQWSDEATFYVFNDAQYTPKDGGAPLSYDDFSFPV 80 (340)
T ss_pred CCCCCCchHHhhhhhhccCCCCHHHHHHHHHHHHHcCCCeeEEEEecccCcceeeeeccchhcccccCCcceecccccCc
Confidence 8999999999999999999999999999999999999999998775 7777 3444 455553
Q ss_pred -CCCCChhHHHHHHHHHHcCCEEEEEeCCCCccCC-----CcHHhHhcccCcEEEe-eCCcceEE-EecCCcccccCCCC
Q 002256 373 -TNYPRPKLLAFLEKIHKIGMKYIVIIDPGIGVNS-----SYGVYQRGIANDVFIK-YEGEPYLA-QVWPGAVNFPDFLN 444 (946)
Q Consensus 373 -~~FP~p~l~~~v~~Lh~~g~k~v~iidP~I~~~~-----~y~~y~~g~~~~~fik-~~g~~~~g-~~WpG~~~~pDf~n 444 (946)
++||+|+ +||++||++|+|+++|++|+|+.+. .+..|.+++++|+||| .+|++|.+ .+|||.+++|||||
T Consensus 81 ~~~FPdp~--~mi~~Lh~~G~kv~l~v~P~i~~~~~~~~~~~~~~~~~~~~g~~vk~~~G~~~~~~~~W~g~~~~~Dftn 158 (340)
T cd06597 81 EGRWPNPK--GMIDELHEQGVKVLLWQIPIIKLRPHPHGQADNDEDYAVAQNYLVQRGVGKPYRIPGQWFPDSLMLDFTN 158 (340)
T ss_pred cccCCCHH--HHHHHHHHCCCEEEEEecCccccccccccccchhHHHHHHCCEEEEcCCCCccccccccCCCceeecCCC
Confidence 6888877 9999999999999999999997531 2345789999999999 47888875 69999999999999
Q ss_pred HHHHHHHHHHHHHhhccCCccEEEEeCCCCcccCCCcccCCCCCCCCCCCCCCccccccCCCcccCCCCCCCcccccCCC
Q 002256 445 PKTVSWWGDEIRRFHELVPVDGLWIDMNEASNFCSGLCKIPKGKQCPTGTGPGWVCCLDCKNITKTRWDDPPYKINASGL 524 (946)
Q Consensus 445 p~a~~ww~~~~~~~~~~~g~dg~W~DmnEps~F~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ppy~~~~~g~ 524 (946)
|+|++||.++++++++++||||||+|||||. |..
T Consensus 159 p~a~~Ww~~~~~~~~~~~Gidg~w~D~~E~~-~~~--------------------------------------------- 192 (340)
T cd06597 159 PEAAQWWMEKRRYLVDELGIDGFKTDGGEHV-WGR--------------------------------------------- 192 (340)
T ss_pred HHHHHHHHHHHHHHHHhcCCcEEEecCCCcc-CCC---------------------------------------------
Confidence 9999999999999998899999999999974 210
Q ss_pred ccccccccccccccccCCccccccccchhhHHHHHHHHHHHhccCCCccEEeccccCCCCCceeeeCCCCCCChHHHHHh
Q 002256 525 QVPIGFKTIATSAYHYNGVLEYDAHSIYGFSQSIATHKALLGLEGKRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYS 604 (946)
Q Consensus 525 ~~~l~~~ti~~~~~h~~g~~~~~~HNlYg~~~~~at~~~l~~~~~kRpfilsRS~f~Gs~ry~~~WtGDn~s~W~~L~~s 604 (946)
+..|++|..++++||+||+++++++++++++. ++||||||||+|+|+|||+++|+|||.|+|++||.+
T Consensus 193 -----------~~~~~~g~~~~~~hN~y~~~~~~~~~e~~~~~-~~r~filtRs~~~Gsqry~~~WsGD~~s~W~~L~~~ 260 (340)
T cd06597 193 -----------DLHFRDGRRGDEMRNTYPNHYVRAYNDFLRRA-KKDGVTFSRAGYTGAQAHGIFWAGDENSTFGAFRWS 260 (340)
T ss_pred -----------CceecCCCcHHHhhcccHHHHHHHHHHHHHhc-cCCcEEEEecccCccCCCcceecCCCCCCHHHHHHH
Confidence 12455677788999999999999999998876 899999999999999999999999999999999999
Q ss_pred HHhhhcccccCCceeeccccccCCC-CChhHHHHHHHhccccceeccCCCCCC-----CCcccccchH
Q 002256 605 ISTMLNFGIFGVPMVGSDICGFYPA-PTEELCNRWIEVGAFYPFSRDHANYYS-----PRQELYQWES 666 (946)
Q Consensus 605 I~~~L~~~l~Gip~~G~DIgGF~g~-~~~EL~~RW~QlgaF~Pf~R~H~~~~~-----~~qeP~~~~~ 666 (946)
|+++|++||+|+||+|+|||||.|+ +++|||+||+|+|||+|+||+|+..+. .+||||.|++
T Consensus 261 i~~~L~~glsG~~~~g~DIgGF~g~~~~~EL~~RW~Q~g~F~P~~R~H~~~~~~~~~~~~~epw~~~~ 328 (340)
T cd06597 261 VFAGLSASASGIPYWGWDLAGFTGDVPTAELYVRSTAMAAFVPIMQYHSEFNGHSSPNEDRTPWNIAE 328 (340)
T ss_pred HHHHHHHhhcCCCcCCCccCCcCCCCCCHHHHHHHHHHhhcchhhhhccCCCCCCcCcCCccCCcccC
Confidence 9999999999999999999999998 899999999999999999999998754 5899999975
No 18
>cd06594 GH31_glucosidase_YihQ YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride. Orthologs of YihQ that have not yet been functionally characterized are present in plants and fungi. YihQ has sequence similarity to other GH31 enzymes such as CtsZ, a 6-alpha-glucosyltransferase from Bacillus globisporus, and YicI, an alpha-xylosidase from Echerichia coli. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation.
Probab=100.00 E-value=1.7e-74 Score=642.19 Aligned_cols=291 Identities=23% Similarity=0.383 Sum_probs=265.3
Q ss_pred CCCCCCCcccccceeccCCCCCHHHHHHHHHHHHHcCCCceEEEecCCCCCC---------ceeeeeCCCCCCChhHHHH
Q 002256 313 GRPAPMPYWSLGFHQCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDHMDG---------HKDFTLNPTNYPRPKLLAF 383 (946)
Q Consensus 313 G~p~lpP~WalG~hq~r~gY~~~~~v~~vv~~~~~~~IPlD~iw~Didym~~---------~~~Ft~d~~~FP~p~l~~~ 383 (946)
|+++|||+||||+||||+.+ ++++|+++++++++++||||+||+| |||+. +++||||+++||+|+ +|
T Consensus 1 G~~p~~P~wa~G~~~~~~~~-s~~~v~~~~~~~~~~~iP~d~i~ld-dw~~~~~~~~g~~~~~~f~~d~~~FPdp~--~m 76 (317)
T cd06594 1 GRQPELPDWAYGGAILGLQG-GTDKVLEALEKARAAGVKVAGLWLQ-DWTGRRETSFGDRLWWNWEWDPERYPGLD--EL 76 (317)
T ss_pred CCCCCCchhhhCcEEeeeeC-CHHHHHHHHHHHHHcCCCeeEEEEc-cccCcccccccceeeeeeEEChhhCCCHH--HH
Confidence 89999999999999999865 9999999999999999999999999 77762 347999999999987 99
Q ss_pred HHHHHHcCCEEEEEeCCCCccCCCcHHhHhcccCcEEEe-eCCcceEEEecCCcccccCCCCHHHHHHHHHHHHHhhccC
Q 002256 384 LEKIHKIGMKYIVIIDPGIGVNSSYGVYQRGIANDVFIK-YEGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHELV 462 (946)
Q Consensus 384 v~~Lh~~g~k~v~iidP~I~~~~~y~~y~~g~~~~~fik-~~g~~~~g~~WpG~~~~pDf~np~a~~ww~~~~~~~~~~~ 462 (946)
|++||++|+|+++|++|+|+.+.. ..|++|.++|+||| .+|+++++.+|||.+++||||||+|++||.+++++++.+.
T Consensus 77 i~~Lh~~G~~~~~~i~P~v~~~~~-~~y~~~~~~g~~vk~~~g~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~~~ 155 (317)
T cd06594 77 IEELKARGIRVLTYINPYLADDGP-LYYEEAKDAGYLVKDADGSPYLVDFGEFDCGVLDLTNPAARDWFKQVIKEMLLDL 155 (317)
T ss_pred HHHHHHCCCEEEEEecCceecCCc-hhHHHHHHCCeEEECCCCCeeeeccCCCCceeeecCCHHHHHHHHHHHHHHhhhc
Confidence 999999999999999999997532 23799999999999 5799999999999999999999999999999999987778
Q ss_pred CccEEEEeCCCCcccCCCcccCCCCCCCCCCCCCCccccccCCCcccCCCCCCCcccccCCCccccccccccccccccCC
Q 002256 463 PVDGLWIDMNEASNFCSGLCKIPKGKQCPTGTGPGWVCCLDCKNITKTRWDDPPYKINASGLQVPIGFKTIATSAYHYNG 542 (946)
Q Consensus 463 g~dg~W~DmnEps~F~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ppy~~~~~g~~~~l~~~ti~~~~~h~~g 542 (946)
||||||+||||+. +.++.+++|
T Consensus 156 Gvdg~w~D~~E~~----------------------------------------------------------p~d~~~~~g 177 (317)
T cd06594 156 GLSGWMADFGEYL----------------------------------------------------------PFDAVLHSG 177 (317)
T ss_pred CCcEEEecCCCCC----------------------------------------------------------CCcceecCC
Confidence 9999999999953 112345667
Q ss_pred ccccccccchhhHHHHHHHHHHHhcc-CCCccEEeccccCCCCCce-eeeCCCCCCChH---HHHHhHHhhhcccccCCc
Q 002256 543 VLEYDAHSIYGFSQSIATHKALLGLE-GKRPFILSRSTFVGSGHYA-AHWTGDNKGTWE---DLKYSISTMLNFGIFGVP 617 (946)
Q Consensus 543 ~~~~~~HNlYg~~~~~at~~~l~~~~-~kRpfilsRS~f~Gs~ry~-~~WtGDn~s~W~---~L~~sI~~~L~~~l~Gip 617 (946)
..++++||+|++++++++++++++.. ++||||||||+|+|+|||+ ++|+|||.|+|+ +|+.+|+++|++||+|+|
T Consensus 178 ~~~~~~hN~y~~~~~~~~~~~~~~~~~~~r~fvltRs~~~Gsqry~~~~WsGD~~s~W~~~~~L~~~i~~~L~~~lsG~~ 257 (317)
T cd06594 178 EDAATMHNRYPELWAKLNREAVEEAGKTGDILFFMRSGFTGSQKYSTLFWAGDQMVSWDAHDGLKSVVPGALSSGLSGYA 257 (317)
T ss_pred CCHHHHhhHHHHHHHHHHHHHHHHhccCCCeEEEEcccccccccccccccCCCCCCCCcCcccHHHHHHHHhhccccCCC
Confidence 77899999999999999999998864 7899999999999999998 589999999998 799999999999999999
Q ss_pred eeeccccccCC----CCChhHHHHHHHhccccceeccCCCCCCCCcccccchH
Q 002256 618 MVGSDICGFYP----APTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQWES 666 (946)
Q Consensus 618 ~~G~DIgGF~g----~~~~EL~~RW~QlgaF~Pf~R~H~~~~~~~qeP~~~~~ 666 (946)
|+|+|||||.+ ++++|||+||+|+|||+|+||+|+...++.++||.+++
T Consensus 258 ~~g~DIGGF~~~~~~~~~~EL~~RW~Q~gaF~P~~R~H~~~~~~~~~~~~~~~ 310 (317)
T cd06594 258 LHHSDIGGYTSLNGYVRTEELLLRWAEMAAFTPVMRTHEGNRPDDNWQFYSDD 310 (317)
T ss_pred cccCccCCCcCCCCCCCCHHHHHHHHHHhccccceecCCCCCCCCCcccccCh
Confidence 99999999975 59999999999999999999999998888889998853
No 19
>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus. Alpha-xylosidases catalyze the release of an alpha-xylose residue from the non-reducing end of alpha-xyloside substrates. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=100.00 E-value=5.6e-71 Score=608.27 Aligned_cols=278 Identities=24% Similarity=0.367 Sum_probs=233.2
Q ss_pred cCCCCCCCcccccceeccCCCCCHHHHHHHHHHHHHcCCCceEEEecCCCCC---------CceeeeeCCCCCCChhHHH
Q 002256 312 IGRPAPMPYWSLGFHQCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDHMD---------GHKDFTLNPTNYPRPKLLA 382 (946)
Q Consensus 312 tG~p~lpP~WalG~hq~r~gY~~~~~v~~vv~~~~~~~IPlD~iw~Didym~---------~~~~Ft~d~~~FP~p~l~~ 382 (946)
||+|+|||+||||||||||+|.++++|+++++++|+++||||+||+|+|||. ++++||||+++||+|+ +
T Consensus 1 TG~~~~~P~walG~~qsr~~y~s~~ev~~v~~~~r~~~iP~D~i~lD~dw~~~~~~~~~~~~~~~ft~d~~~FPdp~--~ 78 (292)
T cd06595 1 AGKIPLLPRYAFGNWWSRYWPYSDEEYLALMDRFKKHNIPLDVLVIDMDWHVTDIPSKYGSGWTGYSWNRKLFPDPE--K 78 (292)
T ss_pred CCCCCCCchHHHHhHhhCCcCCCHHHHHHHHHHHHHhCCCccEEEEecccccccccccccCCcceeEEChhcCCCHH--H
Confidence 7999999999999999999999999999999999999999999999999975 6789999999999987 9
Q ss_pred HHHHHHHcCCEEEEEeCCCCccCCCcHHhHhcccCcEEEeeCCcceEEEecCCcccccCCCCHHHHHHHHHHHHHhhccC
Q 002256 383 FLEKIHKIGMKYIVIIDPGIGVNSSYGVYQRGIANDVFIKYEGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHELV 462 (946)
Q Consensus 383 ~v~~Lh~~g~k~v~iidP~I~~~~~y~~y~~g~~~~~fik~~g~~~~g~~WpG~~~~pDf~np~a~~ww~~~~~~~~~~~ 462 (946)
|+++||++|+|+|+|++|+|+++..+..|++. .++..++ ... +...++||+||++++||.+.+++.+...
T Consensus 79 mi~~Lh~~G~k~v~~v~P~~~~~~~~~~y~~~-~~~~~~~----~~~-----~~~~~~D~tnp~a~~~w~~~~~~~~~~~ 148 (292)
T cd06595 79 LLQDLHDRGLKVTLNLHPADGIRAHEDQYPEM-AKALGVD----PAT-----EGPILFDLTNPKFMDAYFDNVHRPLEKQ 148 (292)
T ss_pred HHHHHHHCCCEEEEEeCCCcccCCCcHHHHHH-HHhcCCC----ccc-----CCeEEecCCCHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999876666677652 2222112 111 1234679999999999988887777778
Q ss_pred CccEEEEeCCCCcccCCCcccCCCCCCCCCCCCCCccccccCCCcccCCCCCCCcccccCCCccccccccccccccccCC
Q 002256 463 PVDGLWIDMNEASNFCSGLCKIPKGKQCPTGTGPGWVCCLDCKNITKTRWDDPPYKINASGLQVPIGFKTIATSAYHYNG 542 (946)
Q Consensus 463 g~dg~W~DmnEps~F~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ppy~~~~~g~~~~l~~~ti~~~~~h~~g 542 (946)
||||||+|||||+.|... +
T Consensus 149 Gidg~W~D~~E~~~~~~~-------------------------------------------------------------~ 167 (292)
T cd06595 149 GVDFWWLDWQQGNRTRTP-------------------------------------------------------------G 167 (292)
T ss_pred CCcEEEecCCCCcccccC-------------------------------------------------------------C
Confidence 999999999999765210 0
Q ss_pred ccccccccchhhHHHHHHHHHHHhccCCCccEEeccccCCCCCceeeeCCCCCCChHHHHHhHHhhhcccccCCceeecc
Q 002256 543 VLEYDAHSIYGFSQSIATHKALLGLEGKRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSD 622 (946)
Q Consensus 543 ~~~~~~HNlYg~~~~~at~~~l~~~~~kRpfilsRS~f~Gs~ry~~~WtGDn~s~W~~L~~sI~~~L~~~l~Gip~~G~D 622 (946)
..+...||. ..+++..+ .++||||||||+|+|+|||+++|+|||.|+|++|+.+|+++|++|++|+||||+|
T Consensus 168 ~~~~~~~~~-------~~y~~~~~-~~~r~f~lsRs~~~G~qry~~~WsGD~~s~W~~l~~~i~~~l~~~~sG~p~~g~D 239 (292)
T cd06595 168 LDPLWWLNH-------VHYLDSAR-NGRRPLIFSRWAGLGSHRYPIGFSGDTIISWASLAFQPYFTATASNIGYGYWSHD 239 (292)
T ss_pred cchHHHHHH-------HHHHHhhc-cCCCcEEEEeecccCCCcCCCccCCCcccCHHHHHHHHHHHHHHHhcCCCcCCCc
Confidence 000011222 23334333 6799999999999999999999999999999999999999999999999999999
Q ss_pred ccccCC-CCChhHHHHHHHhccccceeccCCCCCC-CCcccccchH-HHHH
Q 002256 623 ICGFYP-APTEELCNRWIEVGAFYPFSRDHANYYS-PRQELYQWES-VAES 670 (946)
Q Consensus 623 IgGF~g-~~~~EL~~RW~QlgaF~Pf~R~H~~~~~-~~qeP~~~~~-~~~~ 670 (946)
||||.| ++++|||+||+|+|||+|+||+|+.... .+||||.|++ +.++
T Consensus 240 iGGF~~~~~~~ELy~RW~Q~gaf~P~~R~H~~~~~~~~~ePW~~g~~~~~~ 290 (292)
T cd06595 240 IGGHMLGVTDPELYTRWIQFGVFSPILRLHSTKNPFNEKEPWLYEEEASKI 290 (292)
T ss_pred cCCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCCCCccCcccCcHHHHh
Confidence 999999 7999999999999999999999998765 5899999964 4443
No 20
>cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. In most cases, the pyranose moiety recognized in subsite -1 of the substrate binding site is an alpha-D-glucose, though some GH31 family members show a preference for alpha-D-xylose. Several GH31 enzymes can accommodate both glucose and xylose and different levels of discrimination between the two have been observed. Most characterized GH31 enzymes are alpha-glucosidases. In mammals, GH31 members with alpha-glucosidase activity are implicated in at least three distinct biological processes
Probab=100.00 E-value=1.6e-66 Score=565.83 Aligned_cols=260 Identities=37% Similarity=0.684 Sum_probs=239.1
Q ss_pred CCCCCCCcccccceeccCCCCCHHHHHHHHHHHHHcCCCceEEEecCCCCCCceee--eeCCCCCCChhHHHHHHHHHHc
Q 002256 313 GRPAPMPYWSLGFHQCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDHMDGHKDF--TLNPTNYPRPKLLAFLEKIHKI 390 (946)
Q Consensus 313 G~p~lpP~WalG~hq~r~gY~~~~~v~~vv~~~~~~~IPlD~iw~Didym~~~~~F--t~d~~~FP~p~l~~~v~~Lh~~ 390 (946)
|+|+|||+||||||||||+|.++++|++++++|++++||+|+||+|++|+.++++| +||+++||+|+ +|+++||++
T Consensus 1 G~p~~~P~wa~G~~~~~~~~~~~~~v~~~~~~~~~~~iP~d~~~lD~~~~~~~~~f~~~~d~~~Fpdp~--~~i~~l~~~ 78 (265)
T cd06589 1 GKPALPPKWAFGYWLSRYGYGDQDKVLEVIDGMRENDIPLDGFVLDDDYTDGYGDFTFDWDAGKFPNPK--SMIDELHDN 78 (265)
T ss_pred CCCCCCcHHHHHHHHhcCCCCCHHHHHHHHHHHHHcCCCccEEEECcccccCCceeeeecChhhCCCHH--HHHHHHHHC
Confidence 89999999999999999999999999999999999999999999999999999999 99999999987 999999999
Q ss_pred CCEEEEEeCCCCccCCCcHHhHhcccCcEEEeeCCcceEEEecCCcccccCCCCHHHHHHHHHHHHHhhccCCccEEEEe
Q 002256 391 GMKYIVIIDPGIGVNSSYGVYQRGIANDVFIKYEGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHELVPVDGLWID 470 (946)
Q Consensus 391 g~k~v~iidP~I~~~~~y~~y~~g~~~~~fik~~g~~~~g~~WpG~~~~pDf~np~a~~ww~~~~~~~~~~~g~dg~W~D 470 (946)
|+|+++|++|+| ++||.+++++++.+.|+||||+|
T Consensus 79 g~~~~~~~~P~v---------------------------------------------~~w~~~~~~~~~~~~Gvdg~w~D 113 (265)
T cd06589 79 GVKLVLWIDPYI---------------------------------------------REWWAEVVKKLLVSLGVDGFWTD 113 (265)
T ss_pred CCEEEEEeChhH---------------------------------------------HHHHHHHHHHhhccCCCCEEecc
Confidence 999999999998 89999999998777999999999
Q ss_pred CCCCcccCCCcccCCCCCCCCCCCCCCccccccCCCcccCCCCCCCcccccCCCccccccccccccccccCCcccccccc
Q 002256 471 MNEASNFCSGLCKIPKGKQCPTGTGPGWVCCLDCKNITKTRWDDPPYKINASGLQVPIGFKTIATSAYHYNGVLEYDAHS 550 (946)
Q Consensus 471 mnEps~F~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ppy~~~~~g~~~~l~~~ti~~~~~h~~g~~~~~~HN 550 (946)
||||+.++...+ . .+ .. ++..++++||
T Consensus 114 ~~E~~~~~~~~~-------------------------------------~-~~-------------~~--~~~~~~~~hn 140 (265)
T cd06589 114 MGEPSPGDGNIF-------------------------------------T-GG-------------VV--GRVKHEEMHN 140 (265)
T ss_pred CCCCCcCCCccc-------------------------------------c-CC-------------cC--CCccHHHHcc
Confidence 999987753200 0 00 00 2356789999
Q ss_pred chhhHHHHHHHHHHHhcc-CCCccEEeccccCCCCCceeeeCCCCCCChHHHHHhHHhhhcccccCCceeeccccccCC-
Q 002256 551 IYGFSQSIATHKALLGLE-GKRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYP- 628 (946)
Q Consensus 551 lYg~~~~~at~~~l~~~~-~kRpfilsRS~f~Gs~ry~~~WtGDn~s~W~~L~~sI~~~L~~~l~Gip~~G~DIgGF~g- 628 (946)
+|++++++++++++++.. ++|||++|||+|+|+|||+++|+||+.++|+.||.+|+++|++||+|+||+|+|||||.+
T Consensus 141 ~y~~~~~~~~~~~~~~~~~~~r~~~~sRs~~~Gsqry~~~W~GD~~stW~~l~~~i~~~l~~~l~G~~~~g~DigGf~~~ 220 (265)
T cd06589 141 AYPLLYAEATYEALRKNSKNKRPFILSRSGYAGSQRYAGMWSGDNTSTWGYLRSQIPAGLTMSMSGIPFVGSDIGGFTGG 220 (265)
T ss_pred hhHHHHHHHHHHHHHHhcCCCCeEEEEcCCcccccCcCceeCCcccCCHHHHHHHHHHHHhhhccCCcccCCCcCCCCCC
Confidence 999999999999999875 899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHhccccceeccCCCCCCCCcccccch-HHHHHHH
Q 002256 629 APTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQWE-SVAESAR 672 (946)
Q Consensus 629 ~~~~EL~~RW~QlgaF~Pf~R~H~~~~~~~qeP~~~~-~~~~~~r 672 (946)
++++|||+||+|+|+|+|+||+|+......||||.|+ ++.+++|
T Consensus 221 ~~~~EL~~RW~Q~g~F~P~~R~H~~~~~~~~epw~~~~~~~~~~r 265 (265)
T cd06589 221 DPSAELYVRWFQFGAFTPIMRFHSWNSPKDTEPWAFDEEVTAIIR 265 (265)
T ss_pred CCCHHHHHHHHHHhcCCcceecCCCCCCCCcCCCCcCHHHHHhhC
Confidence 8999999999999999999999999988899999995 4555543
No 21
>cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase. Orthologs of KIA1161 are found in eukaryotes and prokaryotes. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=100.00 E-value=1.3e-59 Score=520.66 Aligned_cols=278 Identities=24% Similarity=0.375 Sum_probs=244.2
Q ss_pred CCCCcccccceeccCCCCCHHHHHHHHHHHHHcCCCceEEEecCCCCCCceeeeeCCCCCCChhHHHHHHHHHHcCCEEE
Q 002256 316 APMPYWSLGFHQCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDHMDGHKDFTLNPTNYPRPKLLAFLEKIHKIGMKYI 395 (946)
Q Consensus 316 ~lpP~WalG~hq~r~gY~~~~~v~~vv~~~~~~~IPlD~iw~Didym~~~~~Ft~d~~~FP~p~l~~~v~~Lh~~g~k~v 395 (946)
...|.|.+. .+...+.++++|+++++++++++||+|+||+|++||+.+++|+||+++||+|+ +|+++||++|+|++
T Consensus 12 ~~~p~W~~W--~~~~~~~s~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~~g~f~~d~~~FPdp~--~mi~~l~~~G~k~~ 87 (303)
T cd06592 12 FRSPIWSTW--ARYKADINQETVLNYAQEIIDNGFPNGQIEIDDNWETCYGDFDFDPTKFPDPK--GMIDQLHDLGFRVT 87 (303)
T ss_pred hCCCccCCh--hhhccCcCHHHHHHHHHHHHHcCCCCCeEEeCCCccccCCccccChhhCCCHH--HHHHHHHHCCCeEE
Confidence 567999974 44477889999999999999999999999999999999999999999999876 99999999999999
Q ss_pred EEeCCCCccCCCcHHhHhcccCcEEEee-CC-cceEEEecCCcccccCCCCHHHHHHHHHHHHHhhccCCccEEEEeCCC
Q 002256 396 VIIDPGIGVNSSYGVYQRGIANDVFIKY-EG-EPYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHELVPVDGLWIDMNE 473 (946)
Q Consensus 396 ~iidP~I~~~~~y~~y~~g~~~~~fik~-~g-~~~~g~~WpG~~~~pDf~np~a~~ww~~~~~~~~~~~g~dg~W~DmnE 473 (946)
+|++|+|+.+ ...|+++.++|+|||. +| .++.+.+|||.+++||||||+|++||.+++++++.+.||||||+||||
T Consensus 88 l~i~P~i~~~--s~~~~e~~~~g~~vk~~~g~~~~~~~~w~g~~~~~Dftnp~a~~w~~~~~~~~~~~~Gvdg~w~D~~E 165 (303)
T cd06592 88 LWVHPFINTD--SENFREAVEKGYLVSEPSGDIPALTRWWNGTAAVLDFTNPEAVDWFLSRLKSLQEKYGIDSFKFDAGE 165 (303)
T ss_pred EEECCeeCCC--CHHHHhhhhCCeEEECCCCCCCcccceecCCcceEeCCCHHHHHHHHHHHHHHHHHhCCcEEEeCCCC
Confidence 9999999864 5789999999999994 56 789999999999999999999999999999999977899999999999
Q ss_pred CcccCCCcccCCCCCCCCCCCCCCccccccCCCcccCCCCCCCcccccCCCccccccccccccccccCCccccccccchh
Q 002256 474 ASNFCSGLCKIPKGKQCPTGTGPGWVCCLDCKNITKTRWDDPPYKINASGLQVPIGFKTIATSAYHYNGVLEYDAHSIYG 553 (946)
Q Consensus 474 ps~F~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ppy~~~~~g~~~~l~~~ti~~~~~h~~g~~~~~~HNlYg 553 (946)
|+.+.. ++.++ .+...||.|.
T Consensus 166 ~~~~p~--------------------------------------------------------~~~~~---~~~~~~n~y~ 186 (303)
T cd06592 166 ASYLPQ--------------------------------------------------------DYVTE---DPLLNPDEYT 186 (303)
T ss_pred cccCCc--------------------------------------------------------ccccC---CcccCHHHHH
Confidence 973211 01111 1234689999
Q ss_pred hHHHHHHHHHHHhccCCCccEEeccccCCCCCceeeeCCCCCCChHHH---HHhHHhhhcccccCCceeecc-ccccCC-
Q 002256 554 FSQSIATHKALLGLEGKRPFILSRSTFVGSGHYAAHWTGDNKGTWEDL---KYSISTMLNFGIFGVPMVGSD-ICGFYP- 628 (946)
Q Consensus 554 ~~~~~at~~~l~~~~~kRpfilsRS~f~Gs~ry~~~WtGDn~s~W~~L---~~sI~~~L~~~l~Gip~~G~D-IgGF~g- 628 (946)
.++++++.+ .+||+++||+|+|+|+++++|+||+.|+|++| +.+|+++|++||+|+||+|+| ||||.+
T Consensus 187 ~~~~~~~~~-------~~~~~~~Rsg~~g~~~~~~~w~GD~~s~W~~~~gl~~~i~~~L~~~lsG~~~w~~D~iGGf~~~ 259 (303)
T cd06592 187 RLYAEMVAE-------FGDLIEVRAGWRSQGLPLFVRMMDKDSSWGGDNGLKSLIPTALTMGLLGYPFVLPDMIGGNAYG 259 (303)
T ss_pred HHHHHHHHh-------hccceEEEeeeecCCCCeeEEcCCCCCCCCCCcCHHHHHHHHHHhhccCCcccCCCccCCcccc
Confidence 888877643 24999999999999999999999999999987 999999999999999999999 899875
Q ss_pred ------CCChhHHHHHHHhccccceeccCCCCCCCCcccccch-HHHHHHH
Q 002256 629 ------APTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQWE-SVAESAR 672 (946)
Q Consensus 629 ------~~~~EL~~RW~QlgaF~Pf~R~H~~~~~~~qeP~~~~-~~~~~~r 672 (946)
.+++|||+||+|+|+|+|+||+| +|||.|+ ++.+++|
T Consensus 260 ~~~~~~~~~~EL~~RW~q~g~f~P~~R~h-------~~PW~~~~e~~~~~~ 303 (303)
T cd06592 260 GNSDDELPDKELYIRWLQLSAFLPVMQFS-------IAPWQYDDEVVEIAK 303 (303)
T ss_pred ccccCCCCCHHHHHHHHHHHHhChhhhcc-------cCCccCCHHHHHhhC
Confidence 37999999999999999999999 5899995 5666553
No 22
>cd06596 GH31_CPE1046 CPE1046 is an uncharacterized Clostridium perfringens protein with a glycosyl hydrolase family 31 (GH31) domain. The domain architecture of CPE1046 and its orthologs includes a C-terminal fibronectin type 3 (FN3) domain and a coagulation factor 5/8 type C domain in addition to the GH31 domain. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=100.00 E-value=2e-47 Score=402.20 Aligned_cols=236 Identities=24% Similarity=0.471 Sum_probs=194.5
Q ss_pred CCCCCCCcccccc--eecc----CCC---------------CCHHHHHHHHHHHHHcCCCceEEEecCCCCCCceeeeeC
Q 002256 313 GRPAPMPYWSLGF--HQCR----WGY---------------HNLSVVEDVVENYKKAKIPLDVIWNDDDHMDGHKDFTLN 371 (946)
Q Consensus 313 G~p~lpP~WalG~--hq~r----~gY---------------~~~~~v~~vv~~~~~~~IPlD~iw~Didym~~~~~Ft~d 371 (946)
|+|.|||.|||++ --|- |.+ ..+..+++|+++|+++++|+.-|.-+..|-.++
T Consensus 1 g~p~~~p~~a~~~g~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~y~~~~~plgw~lpndgyg~~y------ 74 (261)
T cd06596 1 GRPFLLPEYALYLGDADCYNRDYWRKVPEGTSDGGLNGEKESTTDDARKVADKYKENDMPLGWMLPNDGYGCGY------ 74 (261)
T ss_pred CCCccchHHHHhccchhhhccCccccCCCccccccCCCCcccchhhHHHHHHHHHhcCCCceeeccCCCCcchH------
Confidence 8999999999854 2232 332 234679999999999999999999888887776
Q ss_pred CCCCCChhHHHHHHHHHHcCCEEEEEeCCCCccCCCcHHhHhcccCcEEEeeCCcceEEEecCCcccccCCCCHHHHHHH
Q 002256 372 PTNYPRPKLLAFLEKIHKIGMKYIVIIDPGIGVNSSYGVYQRGIANDVFIKYEGEPYLAQVWPGAVNFPDFLNPKTVSWW 451 (946)
Q Consensus 372 ~~~FP~p~l~~~v~~Lh~~g~k~v~iidP~I~~~~~y~~y~~g~~~~~fik~~g~~~~g~~WpG~~~~pDf~np~a~~ww 451 (946)
.+|+++++.++++|++.-+|..-.+
T Consensus 75 ------~~l~~~~~~~~~~g~~~glwt~~~l------------------------------------------------- 99 (261)
T cd06596 75 ------ENLKEVVDYLHANGVETGLWTQSGL------------------------------------------------- 99 (261)
T ss_pred ------HHHHHHHHHHHHcCCccccccccch-------------------------------------------------
Confidence 3588999999999998888733111
Q ss_pred HHHHHHhhccC---CccEEEEeCCCCcccCCCcccCCCCCCCCCCCCCCccccccCCCcccCCCCCCCcccccCCCcccc
Q 002256 452 GDEIRRFHELV---PVDGLWIDMNEASNFCSGLCKIPKGKQCPTGTGPGWVCCLDCKNITKTRWDDPPYKINASGLQVPI 528 (946)
Q Consensus 452 ~~~~~~~~~~~---g~dg~W~DmnEps~F~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ppy~~~~~g~~~~l 528 (946)
+++.+.+ |+...+.|-
T Consensus 100 ----~~~~~ev~~~g~~~~k~Dv--------------------------------------------------------- 118 (261)
T cd06596 100 ----RDIAKEVGAAGVRARKTDV--------------------------------------------------------- 118 (261)
T ss_pred ----hhhhhhhccCCceEEeccc---------------------------------------------------------
Confidence 1111111 222222221
Q ss_pred ccccccccccccCCccccccccchhhHHHHHHHHHHHhccCCCccEEeccccCCCCCceeeeCCCCCCChHHHHHhHHhh
Q 002256 529 GFKTIATSAYHYNGVLEYDAHSIYGFSQSIATHKALLGLEGKRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTM 608 (946)
Q Consensus 529 ~~~ti~~~~~h~~g~~~~~~HNlYg~~~~~at~~~l~~~~~kRpfilsRS~f~Gs~ry~~~WtGDn~s~W~~L~~sI~~~ 608 (946)
.+ -| .+=.|++.+++++++++++.+++||||||||+|+|+|||+++|+|||.++|++||.+|+++
T Consensus 119 ---------~w-~g-----~gy~~~l~~~ka~yeg~~~~~~~RpfiltRsg~aGsQRy~~~WsGD~~stWe~Lr~sI~~~ 183 (261)
T cd06596 119 ---------AW-VG-----AGYSFALNGVKAAADGIESNSNARPFIVTVDGWAGTQRYAGIWTGDQSGSWEYIRFHIPTY 183 (261)
T ss_pred ---------hh-hc-----cchhHHHHHHHHHHHHHHhCCCCCCEEEEecCccccCCCCCccCCCCcCcHHHHHHHHHHH
Confidence 00 00 0123678899999999998889999999999999999999999999999999999999999
Q ss_pred hcccccCCceeeccccccCCCCChhHHHHHHHhccccceeccCCCCCCCCcccccch-HHHHHHHHHHHHHHHHHHHHH
Q 002256 609 LNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQWE-SVAESARNALGMRYKLLPFLY 686 (946)
Q Consensus 609 L~~~l~Gip~~G~DIgGF~g~~~~EL~~RW~QlgaF~Pf~R~H~~~~~~~qeP~~~~-~~~~~~r~ai~lRY~LLPYlY 686 (946)
|++||+|+||||+|||||+|+ ++|||+||+|+|||+|+||+|+..++.+||||.|+ ++.+++|++|++||+||||||
T Consensus 184 L~~gLsG~p~~G~DIGGF~g~-~~EL~vRW~Q~gaF~P~~R~h~~~~~~~rEPW~fge~~~~i~R~~l~LRY~LlPYiY 261 (261)
T cd06596 184 IGSGLSGQPNTTSDVDGIFGG-SPETYTRDLQWKAFTPVLMTMSGWAANDKQPWVFGEPYTSINRDYLKLKMRLMPYIY 261 (261)
T ss_pred HHHHhcCCCcCccccCcCCCC-CHHHHHHHHHHHHhhhhhhhccCCCCCCCCCeeCCHHHHHHHHHHHHHHHHhhCccC
Confidence 999999999999999999999 99999999999999999999999888999999995 588999999999999999998
No 23
>PF13802 Gal_mutarotas_2: Galactose mutarotase-like; PDB: 1XSI_F 1XSK_D 1WE5_E 2F2H_F 1XSJ_F 2G3N_C 2G3M_F 3POC_A 3MKK_A 3PHA_A ....
Probab=99.25 E-value=1.2e-11 Score=107.00 Aligned_cols=65 Identities=31% Similarity=0.499 Sum_probs=45.4
Q ss_pred CceeeecCCCCCCCCcccCCCCcEEeeeccCCCCCC--CCCccceeeeEEEecCCCCCCceEEEEEecCCceeE
Q 002256 204 DASLYGLGENTQPHGIKLYPNDPYTLYTTDVSAINL--NTDLYGSHPVYMDLRNVNGEGAAHGVLLLSSNGMDV 275 (946)
Q Consensus 204 ~~~iYGlGE~~~~~~~~l~~~~~~~l~n~D~~~~~~--~~~lYgs~Pf~~~~~~~~~~g~~~Gvf~~Ns~~~dv 275 (946)
+|++||||||+++ + .++|+++++||+|...+.. ..++|+++||+|.++. +..+|||++|+..+.+
T Consensus 1 de~~yGlGE~~~~--l-~~~g~~~~~~n~D~~~~~~~~~~~lY~siPf~~~~~s----~~~yGvf~dn~~~~~~ 67 (68)
T PF13802_consen 1 DERFYGLGERFGP--L-NRRGKRYRLWNTDAFGYNGPSSDPLYKSIPFFIAHRS----GKGYGVFFDNPSRTFF 67 (68)
T ss_dssp T-EEEEESS-SS---S-S-TTEEEEE-B---TSS-GTTBS-BSEEEEEEEEEEC----TCEEEEEEE-SS-EEE
T ss_pred CCcEEcccccCCC--c-ccCCcEEEEEECcCCCcCCCcCccccccEeEEEEeCC----CCEEEEEEeCCCceEE
Confidence 5899999999974 3 4679999999999987753 4789999999998876 5789999999998765
No 24
>PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycosyl hydrolase family 27, family 31 and family 36 alpha-galactosidases form the glycosyl hydrolase clan GH-D (acc_GH from CAZY), a superfamily of alpha-galactosidases, alpha-N-acetylgalactosaminidases, and isomaltodextranases which are likely to share a common catalytic mechanism and structural topology. Alpha-galactosidase (3.2.1.22 from EC) (melibiase) [] catalyzes the hydrolysis of melibiose into galactose and glucose. In man, the deficiency of this enzyme is the cause of Fabry's disease (X-linked sphingolipidosis). Alpha-galactosidase is present in a variety of organisms. There is a considerable degree of similarity in the sequence of alpha-galactosidase from various eukaryotic species. Escherichia coli alpha-galactosidase (gene melA), which requires NAD and magnesium as cofactors, is not structurally related to the eukaryotic enzymes; by contrast, an Escherichia coli plasmid encoded alpha-galactosidase (gene rafA P16551 from SWISSPROT) [] contains a region of about 50 amino acids which is similar to a domain of the eukaryotic alpha-galactosidases. Alpha-N-acetylgalactosaminidase (3.2.1.49 from EC) [] catalyzes the hydrolysis of terminal non-reducing N-acetyl-D-galactosamine residues in N-acetyl-alpha-D- galactosaminides. In man, the deficiency of this enzyme is the cause of Schindler and Kanzaki diseases. The sequence of this enzyme is highly related to that of the eukaryotic alpha-galactosidases.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1KTC_A 1KTB_A 1UAS_A 3H55_A 3H53_A 3IGU_B 3H54_A 3LRM_A 3LRL_A 3LRK_A ....
Probab=99.24 E-value=2.5e-10 Score=130.65 Aligned_cols=133 Identities=19% Similarity=0.306 Sum_probs=98.1
Q ss_pred CCHHHHHHHHHHHHHcCCCceEEEecCCCCC-------CceeeeeCCCCCCChhHHHHHHHHHHcCCEEEEEeCCCCccC
Q 002256 333 HNLSVVEDVVENYKKAKIPLDVIWNDDDHMD-------GHKDFTLNPTNYPRPKLLAFLEKIHKIGMKYIVIIDPGIGVN 405 (946)
Q Consensus 333 ~~~~~v~~vv~~~~~~~IPlD~iw~Didym~-------~~~~Ft~d~~~FP~p~l~~~v~~Lh~~g~k~v~iidP~I~~~ 405 (946)
-+++.+++.++.+++.| ++.+.+|..|.. +.+||+.|+++||+ .|+.+++.+|++|+|+.+|+.|.+..
T Consensus 55 ~~e~~i~~~a~~~~~~G--~e~fviDDGW~~~r~~d~~~~GdW~~~~~kFP~-Gl~~l~~~i~~~Gmk~GlW~ePe~v~- 130 (394)
T PF02065_consen 55 ITEEKILELADAAAELG--YEYFVIDDGWFGGRDDDNAGLGDWEPDPKKFPN-GLKPLADYIHSLGMKFGLWFEPEMVS- 130 (394)
T ss_dssp --HHHHHHHHHHHHHHT---SEEEE-SSSBCTESTTTSTTSBECBBTTTSTT-HHHHHHHHHHHTT-EEEEEEETTEEE-
T ss_pred CCHHHHHHHHHHHHHhC--CEEEEEcCccccccCCCcccCCceeEChhhhCC-cHHHHHHHHHHCCCeEEEEecccccc-
Confidence 47889999999997776 578999999974 35899999999998 58999999999999999999998643
Q ss_pred CCcHHhHhcccCcEEEeeCCcceEEEecCCcccccCCCCHHHHHHHHHHHHHhhccCCccEEEEeCCCC
Q 002256 406 SSYGVYQRGIANDVFIKYEGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHELVPVDGLWIDMNEA 474 (946)
Q Consensus 406 ~~y~~y~~g~~~~~fik~~g~~~~g~~WpG~~~~pDf~np~a~~ww~~~~~~~~~~~g~dg~W~DmnEp 474 (946)
.+...|++ ..|++++..+.+- .......++|++||++++|..+.+.++..+.|+|++++|||..
T Consensus 131 ~~S~l~~~--hPdw~l~~~~~~~---~~~r~~~vLD~~~pev~~~l~~~i~~ll~~~gidYiK~D~n~~ 194 (394)
T PF02065_consen 131 PDSDLYRE--HPDWVLRDPGRPP---TLGRNQYVLDLSNPEVRDYLFEVIDRLLREWGIDYIKWDFNRD 194 (394)
T ss_dssp SSSCHCCS--SBGGBTCCTTSE----ECBTTBEEB-TTSHHHHHHHHHHHHHHHHHTT-SEEEEE-TS-
T ss_pred chhHHHHh--CccceeecCCCCC---cCcccceEEcCCCHHHHHHHHHHHHHHHHhcCCCEEEeccccC
Confidence 33455543 2355555333221 1122456799999999999999999988889999999999974
No 25
>COG3345 GalA Alpha-galactosidase [Carbohydrate transport and metabolism]
Probab=98.52 E-value=2.2e-06 Score=98.45 Aligned_cols=169 Identities=17% Similarity=0.238 Sum_probs=125.8
Q ss_pred EeCCChHHHHHHHHhhcCCCCCCCcccc---cceeccC-CCC---CHHHHHHHHHHHHHcCCCceEEEecCCCCC-----
Q 002256 296 FAGPSPLAVVDQYTAFIGRPAPMPYWSL---GFHQCRW-GYH---NLSVVEDVVENYKKAKIPLDVIWNDDDHMD----- 363 (946)
Q Consensus 296 f~Gp~p~~vi~qY~~ltG~p~lpP~Wal---G~hq~r~-gY~---~~~~v~~vv~~~~~~~IPlD~iw~Didym~----- 363 (946)
..++....+.+.|++++++--+|--|+= =-+.|.| +|+ +.+++.+.++..++ ++++.+.+|+.|..
T Consensus 262 ~edqgl~~lsq~y~~~v~~~i~~~~~~~kprPi~~nsWea~Yfd~t~e~ile~vk~akk--~gvE~FvlDDGwfg~rndd 339 (687)
T COG3345 262 LEDQGLNGLSQKYAELVRMEIVPRPRVKKPRPIGWNSWEAYYFDFTEEEILENVKEAKK--FGVELFVLDDGWFGGRNDD 339 (687)
T ss_pred EcCCCcchHHHHHHHHHHhhcCcccccCCCCcceeeceeeeeecCCHHHHHHHHHHHhh--cCeEEEEEccccccccCcc
Confidence 3477888999999999998777723331 1245566 333 77888888877655 55999999999994
Q ss_pred --CceeeeeCCCCCCChhHHHHHHHHHHcCCEEEEEeCCCCccCCCcHHhHhcccCcEEEeeCCcceEEEecCCcccccC
Q 002256 364 --GHKDFTLNPTNYPRPKLLAFLEKIHKIGMKYIVIIDPGIGVNSSYGVYQRGIANDVFIKYEGEPYLAQVWPGAVNFPD 441 (946)
Q Consensus 364 --~~~~Ft~d~~~FP~p~l~~~v~~Lh~~g~k~v~iidP~I~~~~~y~~y~~g~~~~~fik~~g~~~~g~~WpG~~~~pD 441 (946)
.-+||-.|.++||. .+.++++.++++|+++-+|+.|.+.. .+.++|.+ .-|++||.+|.|.... -+....|
T Consensus 340 ~~slGDWlv~seKfPs-giE~li~~I~e~Gl~fGIWlePemvs-~dSdlfrq--HPDWvvk~~G~p~~~~---Rnqyvl~ 412 (687)
T COG3345 340 LKSLGDWLVNSEKFPS-GIEELIEAIAENGLIFGIWLEPEMVS-EDSDLFRQ--HPDWVVKVNGYPLMAG---RNQYVLW 412 (687)
T ss_pred hhhhhceecchhhccc-cHHHHHHHHHHcCCccceeecchhcc-cchHHHhh--CCCeEEecCCcccccc---ccchhhh
Confidence 34799999999997 47799999999999999999998753 45688875 7899999888775431 1345667
Q ss_pred CCCHHHHHHHHHHHHHhhccCCccEEEEeCCC
Q 002256 442 FLNPKTVSWWGDEIRRFHELVPVDGLWIDMNE 473 (946)
Q Consensus 442 f~np~a~~ww~~~~~~~~~~~g~dg~W~DmnE 473 (946)
+.||.....-.+.+..++-.-.||.+.-|||-
T Consensus 413 ~s~p~vv~~l~~~l~qll~~~~v~ylkwdmnr 444 (687)
T COG3345 413 LSNPIVVLDLSEDLVQLLLFHLVSYLKWDMNR 444 (687)
T ss_pred ccChHHHHHhhhHHHHHHHhhhHHHHHHHhCc
Confidence 78887777766655444434467777788873
No 26
>PLN03231 putative alpha-galactosidase; Provisional
Probab=98.21 E-value=3.1e-05 Score=87.46 Aligned_cols=131 Identities=12% Similarity=0.071 Sum_probs=89.3
Q ss_pred CHHHHHHHHHHHHHcC---CCceEEEecCCCC--------------------CCceeeeeCCCCCCC----hhHHHHHHH
Q 002256 334 NLSVVEDVVENYKKAK---IPLDVIWNDDDHM--------------------DGHKDFTLNPTNYPR----PKLLAFLEK 386 (946)
Q Consensus 334 ~~~~v~~vv~~~~~~~---IPlD~iw~Didym--------------------~~~~~Ft~d~~~FP~----p~l~~~v~~ 386 (946)
|++++++.++ +.+.| .-.+-|.+|+.|+ +.++.+..|+++||. ..|+.+.+.
T Consensus 16 ~E~~i~~~Ad-~v~~gL~~~GY~Yv~iDd~W~~~~~~g~~~~~~~~~~~~~~d~~G~l~pd~~rFPs~~~~~G~k~lADy 94 (357)
T PLN03231 16 SEEQFLENAK-IVSETLKPHGYEYVVIDYLWYRKLKHGWFKTSAKSPGYDLIDKWGRPLPDPKRWPSTTGGKGFAPIAAK 94 (357)
T ss_pred CHHHHHHHHH-HHHcchHHhCCEEEEECCcccccccccccccccccccccccCCCCCcccCcccCCCCccccCcHHHHHH
Confidence 7888888887 44433 3457788888886 346778899999996 248899999
Q ss_pred HHHcCCEEEEEeCCCCccCC---CcHHhH-hc------ccCcEEEeeCCcceEEEecC-CcccccCCCCHHHHHHHHHHH
Q 002256 387 IHKIGMKYIVIIDPGIGVNS---SYGVYQ-RG------IANDVFIKYEGEPYLAQVWP-GAVNFPDFLNPKTVSWWGDEI 455 (946)
Q Consensus 387 Lh~~g~k~v~iidP~I~~~~---~y~~y~-~g------~~~~~fik~~g~~~~g~~Wp-G~~~~pDf~np~a~~ww~~~~ 455 (946)
+|++|.|+-+.++|++..-. +++..- .| ..+|+-+. -....|. .....+|..+|.+++|+....
T Consensus 95 vHs~GLKfGIY~~~G~~tca~~~~~pi~G~~Gs~g~~~~a~Dia~~-----~~~c~~~~~~~~~v~~~~~gaq~y~~~~a 169 (357)
T PLN03231 95 VHALGLKLGIHVMRGISTTAVKKKTPILGAFKSNGHAWNAKDIALM-----DQACPWMQQCFVGVNTSSEGGKLFIQSLY 169 (357)
T ss_pred HHhCCcceEEEecCCccchhcccCCccCCCCcccccccchhhhccc-----cccccccccccccccccchhHHHHHHHHH
Confidence 99999999999999987431 111100 00 01121111 0112233 223368999999999998877
Q ss_pred HHhhccCCccEEEEeC
Q 002256 456 RRFHELVPVDGLWIDM 471 (946)
Q Consensus 456 ~~~~~~~g~dg~W~Dm 471 (946)
+.|- +.|||.++.|-
T Consensus 170 ~~fA-~WGVDylK~D~ 184 (357)
T PLN03231 170 DQYA-SWGIDFIKHDC 184 (357)
T ss_pred HHHH-HhCCCEEeecc
Confidence 7664 59999999993
No 27
>PLN02899 alpha-galactosidase
Probab=98.08 E-value=0.0001 Score=87.28 Aligned_cols=131 Identities=15% Similarity=0.139 Sum_probs=85.6
Q ss_pred CHHHHHHHHHHHHHcC---CCceEEEecCCCCC-----------------CceeeeeCCCCCCC----hhHHHHHHHHHH
Q 002256 334 NLSVVEDVVENYKKAK---IPLDVIWNDDDHMD-----------------GHKDFTLNPTNYPR----PKLLAFLEKIHK 389 (946)
Q Consensus 334 ~~~~v~~vv~~~~~~~---IPlD~iw~Didym~-----------------~~~~Ft~d~~~FP~----p~l~~~v~~Lh~ 389 (946)
+++++++.++- .+.| .-.+-|.+|+.|+. .++....|++|||. ..|+.+.+.+|+
T Consensus 46 ~E~~i~~~Ad~-vs~GLk~~GY~YVnIDDcW~~~~~~g~~~~s~g~~~~D~~GrLvPDp~RFPSs~~g~GmK~LADYVHs 124 (633)
T PLN02899 46 SEEEFLQNAEI-VSQRLLPFGYEYVVVDYLWYRKKVEGAYVDSLGFDVIDEWGRPIPDPGRWPSSRGGKGFTEVAEKVHA 124 (633)
T ss_pred CHHHHHHHHHH-HHcchHhhCCeEEEEccccccccccccccccccccccCCCCCCccCcccCCCCccCCCcHHHHHHHHh
Confidence 77888887763 3333 34567888888864 34578899999996 358899999999
Q ss_pred cCCEEEEEeCCCCccCC---CcHH--------hHh----cccCcEEEeeCCcceEEEecCCc-ccccCCCCHHHHHHHHH
Q 002256 390 IGMKYIVIIDPGIGVNS---SYGV--------YQR----GIANDVFIKYEGEPYLAQVWPGA-VNFPDFLNPKTVSWWGD 453 (946)
Q Consensus 390 ~g~k~v~iidP~I~~~~---~y~~--------y~~----g~~~~~fik~~g~~~~g~~WpG~-~~~pDf~np~a~~ww~~ 453 (946)
+|.|+-+.+++++.... +.+. |.+ -.++|+-+. -...-|-.. -.-.|...+.+++|...
T Consensus 125 kGLKFGIY~~~Gi~tcA~~~~~PI~gs~~g~~y~~s~~~~~a~DIa~~-----~~tC~w~~~g~~~vDa~~~~g~a~~~S 199 (633)
T PLN02899 125 MGLKFGIHVMRGISTQAVNANTPILDAVKGGAYEESGRQWRAKDIALK-----ERACAWMSHGFMSVNTKLGAGKAFLRS 199 (633)
T ss_pred CCcceEEEecCCCcccccccCCccccccccccccccccccchhhcccc-----ccccccCCCCcccccccccchhhhhHH
Confidence 99999999999986421 1111 110 011222111 111123211 12468888889998877
Q ss_pred HHHHhhccCCccEEEEeC
Q 002256 454 EIRRFHELVPVDGLWIDM 471 (946)
Q Consensus 454 ~~~~~~~~~g~dg~W~Dm 471 (946)
..+.| ...|||.++.|-
T Consensus 200 la~tf-AsWGVDyLKyD~ 216 (633)
T PLN02899 200 LYDQY-AEWGVDFVKHDC 216 (633)
T ss_pred HHHHH-HHhCCCEEEEcC
Confidence 66655 469999999993
No 28
>PLN02229 alpha-galactosidase
Probab=98.04 E-value=5.3e-05 Score=87.20 Aligned_cols=70 Identities=16% Similarity=0.297 Sum_probs=60.1
Q ss_pred CHHHHHHHHHHHHHcCCC---ceEEEecCCCCC----CceeeeeCCCCCCChhHHHHHHHHHHcCCEEEEEeCCCCcc
Q 002256 334 NLSVVEDVVENYKKAKIP---LDVIWNDDDHMD----GHKDFTLNPTNYPRPKLLAFLEKIHKIGMKYIVIIDPGIGV 404 (946)
Q Consensus 334 ~~~~v~~vv~~~~~~~IP---lD~iw~Didym~----~~~~Ft~d~~~FP~p~l~~~v~~Lh~~g~k~v~iidP~I~~ 404 (946)
+++.+++.++.+.+.|+. .+-|.+|+.|+. ..+++..|+++||+ .|+.+.+.+|++|+|+-++.|+++..
T Consensus 78 ~E~~i~~~ad~~v~~Gl~~~Gy~yv~iDDgW~~~~rd~~G~l~~d~~rFP~-G~k~ladyiH~~GlKfGIy~d~G~~T 154 (427)
T PLN02229 78 NETVIKETADALVSTGLADLGYIHVNIDDCWSNLKRDSKGQLVPDPKTFPS-GIKLLADYVHSKGLKLGIYSDAGVFT 154 (427)
T ss_pred CHHHHHHHHHHHHHhHHHhCCCEEEEEcCCcCCCCcCCCCCEEEChhhcCC-cHHHHHHHHHHCCCceEEeccCCCcc
Confidence 788899999987665544 788999999974 45789999999997 58999999999999999999999873
No 29
>PLN02808 alpha-galactosidase
Probab=97.98 E-value=0.00029 Score=80.63 Aligned_cols=118 Identities=17% Similarity=0.291 Sum_probs=85.8
Q ss_pred cCCCCCCCcccccceeccCC-C---CCHHHHHHHHHHHHHcCCC---ceEEEecCCCCC----CceeeeeCCCCCCChhH
Q 002256 312 IGRPAPMPYWSLGFHQCRWG-Y---HNLSVVEDVVENYKKAKIP---LDVIWNDDDHMD----GHKDFTLNPTNYPRPKL 380 (946)
Q Consensus 312 tG~p~lpP~WalG~hq~r~g-Y---~~~~~v~~vv~~~~~~~IP---lD~iw~Didym~----~~~~Ft~d~~~FP~p~l 380 (946)
-|....|| +||. .|. | -+++.++++++.+.+.|+. .+.|.+|+.|+. ..+++..|+++||+ .|
T Consensus 26 ngla~tPp---mGWn--sW~~~~~~i~e~~i~~~a~~mv~~Gl~~~Gy~yv~iDd~W~~~~rd~~G~~~~d~~rFP~-G~ 99 (386)
T PLN02808 26 NGLGLTPQ---MGWN--SWNHFQCNINETLIKQTADAMVSSGLAALGYKYINLDDCWAELKRDSQGNLVPKASTFPS-GI 99 (386)
T ss_pred CcccCCCc---ceEE--chHHHCCCCCHHHHHHHHHHHHHcchHHhCCEEEEEcCCcCCCCcCCCCCEeeChhhcCc-cH
Confidence 35556666 4652 232 2 2788999999998876654 899999999964 46789999999997 58
Q ss_pred HHHHHHHHHcCCEEEEEeCCCCccCCCcHHhHhcccCcEEEeeCCcceEEEecCCcccccCCCCHHHHHHHHHHHHHhhc
Q 002256 381 LAFLEKIHKIGMKYIVIIDPGIGVNSSYGVYQRGIANDVFIKYEGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHE 460 (946)
Q Consensus 381 ~~~v~~Lh~~g~k~v~iidP~I~~~~~y~~y~~g~~~~~fik~~g~~~~g~~WpG~~~~pDf~np~a~~ww~~~~~~~~~ 460 (946)
+.+.+.+|++|+|+-++.|++...-.. ..|-+..+...-.+.| .
T Consensus 100 ~~lad~iH~~GlkfGiy~~~G~~tC~~-----------------------------------~~pGs~~~e~~DA~~f-A 143 (386)
T PLN02808 100 KALADYVHSKGLKLGIYSDAGTLTCSK-----------------------------------TMPGSLGHEEQDAKTF-A 143 (386)
T ss_pred HHHHHHHHHCCCceEEEecCCccccCC-----------------------------------CCCcchHHHHHHHHHH-H
Confidence 999999999999999999987431110 1233345554444444 4
Q ss_pred cCCccEEEEeC
Q 002256 461 LVPVDGLWIDM 471 (946)
Q Consensus 461 ~~g~dg~W~Dm 471 (946)
..|||.++.|.
T Consensus 144 ~WGvDylK~D~ 154 (386)
T PLN02808 144 SWGIDYLKYDN 154 (386)
T ss_pred HhCCCEEeecC
Confidence 69999999995
No 30
>PLN02692 alpha-galactosidase
Probab=97.95 E-value=0.00029 Score=80.87 Aligned_cols=127 Identities=16% Similarity=0.263 Sum_probs=89.6
Q ss_pred HHHHHHHhhcCCCCCCCcccccceeccCC-CC---CHHHHHHHHHHHHHcCC---CceEEEecCCCC----CCceeeeeC
Q 002256 303 AVVDQYTAFIGRPAPMPYWSLGFHQCRWG-YH---NLSVVEDVVENYKKAKI---PLDVIWNDDDHM----DGHKDFTLN 371 (946)
Q Consensus 303 ~vi~qY~~ltG~p~lpP~WalG~hq~r~g-Y~---~~~~v~~vv~~~~~~~I---PlD~iw~Didym----~~~~~Ft~d 371 (946)
++......--|....|| +|| |-|. |. +++.+++.++.+.+.|+ ..+-|.+|+.|+ +..+.+..|
T Consensus 41 ~~~~~~~~~ngla~tPp---mGW--nSW~~~~~~i~E~~i~~~ad~~~~~gl~~~Gy~yv~iDDgW~~~~rd~~G~~~~d 115 (412)
T PLN02692 41 EILRRNLLANGLGITPP---MGW--NSWNHFSCKIDEKMIKETADALVSTGLSKLGYTYVNIDDCWAEIARDEKGNLVPK 115 (412)
T ss_pred hhhhhhcccCcCcCCCc---ceE--EchhhhCcccCHHHHHHHHHHHHhccchhcCcEEEEEcCCcCCCCCCCCCCeeeC
Confidence 44444333455566666 454 2332 22 78889999998877655 488899999997 456789999
Q ss_pred CCCCCChhHHHHHHHHHHcCCEEEEEeCCCCccCCCcHHhHhcccCcEEEeeCCcceEEEecCCcccccCCCCHHHHHHH
Q 002256 372 PTNYPRPKLLAFLEKIHKIGMKYIVIIDPGIGVNSSYGVYQRGIANDVFIKYEGEPYLAQVWPGAVNFPDFLNPKTVSWW 451 (946)
Q Consensus 372 ~~~FP~p~l~~~v~~Lh~~g~k~v~iidP~I~~~~~y~~y~~g~~~~~fik~~g~~~~g~~WpG~~~~pDf~np~a~~ww 451 (946)
+++||+ .|+.+++.+|++|+|+-++.|++...-. | ..|.+..+.
T Consensus 116 ~~kFP~-G~k~ladyiH~~GLKfGIy~d~G~~tC~--------------------------~---------~~pGS~g~e 159 (412)
T PLN02692 116 KSTFPS-GIKALADYVHSKGLKLGIYSDAGYFTCS--------------------------K---------TMPGSLGHE 159 (412)
T ss_pred hhhcCC-cHHHHHHHHHHCCCceEEEecCCccccC--------------------------C---------CCCCchHHH
Confidence 999997 5999999999999999999998853210 0 123345555
Q ss_pred HHHHHHhhccCCccEEEEeC
Q 002256 452 GDEIRRFHELVPVDGLWIDM 471 (946)
Q Consensus 452 ~~~~~~~~~~~g~dg~W~Dm 471 (946)
..-.+.| ...|||.++.|.
T Consensus 160 ~~DA~~f-A~WGvDylK~D~ 178 (412)
T PLN02692 160 EQDAKTF-ASWGIDYLKYDN 178 (412)
T ss_pred HHHHHHH-HhcCCCEEeccc
Confidence 5444444 569999999994
No 31
>PLN02355 probable galactinol--sucrose galactosyltransferase 1
Probab=96.90 E-value=0.031 Score=68.15 Aligned_cols=136 Identities=17% Similarity=0.280 Sum_probs=85.6
Q ss_pred ceEEEEEecCC-ceeEEEeCCeEEEEEEccEEEEEEEeCCChHHHHHHHHhhcCCC---------CCCCcccccceeccC
Q 002256 261 AAHGVLLLSSN-GMDVFYKGTSLTYKIIGGVFDFYFFAGPSPLAVVDQYTAFIGRP---------APMPYWSLGFHQCRW 330 (946)
Q Consensus 261 ~~~Gvf~~Ns~-~~dv~~~~~~~~~~~~gG~lD~y~f~Gp~p~~vi~qY~~ltG~p---------~lpP~WalG~hq~r~ 330 (946)
..-..+--|.. .+++-+.+....-....+.-=+|+-.|.+|-++++++.+.+-+. .-+|.--=+|=.|.|
T Consensus 131 ~fra~Lqg~~~~~l~ic~eSG~~~v~~~~~~~~v~v~~g~dpy~li~~a~~~v~~hl~tf~~re~K~~P~~ld~~GWCTW 210 (758)
T PLN02355 131 DFRAVLQGNEHNELEICLESGDPAVDEFEGSHLVFVAAGSDPFDVITNAVKAVEKHLQTFSHRERKKMPDMLNWFGWCTW 210 (758)
T ss_pred ceEEEEecCCCCcEEEEEEcCCCccccccCceEEEEEcCCCHHHHHHHHHHHHHHHhccccchhhccCCcccceeeEEeh
Confidence 33344444433 34444432222222233444567777999999999997664332 112321113445788
Q ss_pred C--CC--CHHHHHHHHHHHHHcCCCceEEEecCCCCCCc--------------------eeeeeCCCCCCC---------
Q 002256 331 G--YH--NLSVVEDVVENYKKAKIPLDVIWNDDDHMDGH--------------------KDFTLNPTNYPR--------- 377 (946)
Q Consensus 331 g--Y~--~~~~v~~vv~~~~~~~IPlD~iw~Didym~~~--------------------~~Ft~d~~~FP~--------- 377 (946)
. |. +++.|++.++.+.+.++|..-+-+|+.|..-. ..|.=|+ +||.
T Consensus 211 ~afy~~Vt~~~I~~~l~~l~~~g~p~~~viIDDGwQs~~~d~~~~~~~~~~~~q~~~rL~~f~~n~-KF~~~~~~~~~~~ 289 (758)
T PLN02355 211 DAFYTNVTAEGVKQGLESLEKGGVTPKFVIIDDGWQSVGMDPTGIECLADNSANFANRLTHIKENH-KFQKNGKEGHRVD 289 (758)
T ss_pred hHhhccCCHHHHHHHHHHHHhCCCCccEEEEeccccccccccccccccccccchhhhhhccccccc-ccccccccccccc
Confidence 5 22 67889999999999999999999999987521 1233333 5663
Q ss_pred ---hhHHHHHHHHHH-cCCEEEEE
Q 002256 378 ---PKLLAFLEKIHK-IGMKYIVI 397 (946)
Q Consensus 378 ---p~l~~~v~~Lh~-~g~k~v~i 397 (946)
..|+.+|++|++ .|+|+|-.
T Consensus 290 ~~~~Glk~~V~~iK~~~~vk~V~V 313 (758)
T PLN02355 290 DPALGLGHIVTEIKEKHSLKYVYV 313 (758)
T ss_pred CCCCcHHHHHHHHHhhcCCcEEEE
Confidence 378999999986 68888754
No 32
>PLN02219 probable galactinol--sucrose galactosyltransferase 2
Probab=96.69 E-value=0.05 Score=66.34 Aligned_cols=105 Identities=17% Similarity=0.305 Sum_probs=77.3
Q ss_pred EEEEEeCCChHHHHHHHHhhcCC---------CCCCCcccccceeccCC--CC--CHHHHHHHHHHHHHcCCCceEEEec
Q 002256 292 DFYFFAGPSPLAVVDQYTAFIGR---------PAPMPYWSLGFHQCRWG--YH--NLSVVEDVVENYKKAKIPLDVIWND 358 (946)
Q Consensus 292 D~y~f~Gp~p~~vi~qY~~ltG~---------p~lpP~WalG~hq~r~g--Y~--~~~~v~~vv~~~~~~~IPlD~iw~D 358 (946)
=.|+-.|.+|-++++++.+.+-+ -.-+|.|-=||=.|.|. |. +++.|++.++.+.+.++|...+-+|
T Consensus 159 ~v~~~~G~dPy~li~~a~~av~~h~~tf~~re~K~~p~~~D~~GWCTWdafy~dVt~~~I~~~l~~l~e~gip~~~viID 238 (775)
T PLN02219 159 LVYMHAGTNPFEVIRQAVKAVEKHMQTFLHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSEGGTPPKFLIID 238 (775)
T ss_pred EEEEecCCCHHHHHHHHHHHHHHhcccccccccccCccccceeeEEEhhHhhccCCHHHHHHHHHHHHhCCCCceEEEEc
Confidence 34556799999999999876521 11257777677778985 33 6778999999999999999999999
Q ss_pred CCCCCC--------------------ceeeeeCC--------CCCCChhHHHHHHHHHH-cCCEEEEE
Q 002256 359 DDHMDG--------------------HKDFTLNP--------TNYPRPKLLAFLEKIHK-IGMKYIVI 397 (946)
Q Consensus 359 idym~~--------------------~~~Ft~d~--------~~FP~p~l~~~v~~Lh~-~g~k~v~i 397 (946)
+.|+.- ...|.=++ ..||. .|+.+|+++++ .|+|+|-.
T Consensus 239 DGwQsi~~~~~~~~~~~~~g~qf~~rL~~f~en~KF~~~~~~~~fp~-Glk~~V~~iK~~~~vk~V~V 305 (775)
T PLN02219 239 DGWQQIENKEKDENCVVQEGAQFATRLTGIKENAKFQKNDQKNEQVS-GLKHVVDDAKQRHNVKQVYV 305 (775)
T ss_pred cCccccccccccccccccccchhhhhhccccccccccccccccCCCC-cHHHHHHHHHhccCCcEEEE
Confidence 999742 12233222 14675 68999999986 68888753
No 33
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6
Probab=96.24 E-value=0.02 Score=56.35 Aligned_cols=84 Identities=19% Similarity=0.301 Sum_probs=59.3
Q ss_pred HHHHHHHHHHcCCEEEEEeCCCCccCCCcHHhHhcccCcEEEe-eCCcceEEEec--CCcccccCCCCHHHHHHHHHHHH
Q 002256 380 LLAFLEKIHKIGMKYIVIIDPGIGVNSSYGVYQRGIANDVFIK-YEGEPYLAQVW--PGAVNFPDFLNPKTVSWWGDEIR 456 (946)
Q Consensus 380 l~~~v~~Lh~~g~k~v~iidP~I~~~~~y~~y~~g~~~~~fik-~~g~~~~g~~W--pG~~~~pDf~np~a~~ww~~~~~ 456 (946)
|.++|+..|++|+|++.-++.... + ..|+ ..-+++++ .+|++..+.-+ || ....-+.. .-+++-..+++
T Consensus 46 lge~v~a~h~~Girv~ay~~~~~d--~--~~~~--~HPeW~~~~~~G~~~~~~~~~~~~-~~~~c~ns-~Y~e~~~~~i~ 117 (132)
T PF14871_consen 46 LGEQVEACHERGIRVPAYFDFSWD--E--DAAE--RHPEWFVRDADGRPMRGERFGYPG-WYTCCLNS-PYREFLLEQIR 117 (132)
T ss_pred HHHHHHHHHHCCCEEEEEEeeecC--h--HHHH--hCCceeeECCCCCCcCCCCcCCCC-ceecCCCc-cHHHHHHHHHH
Confidence 689999999999999999998832 1 3333 35678887 57886322111 22 22234444 34578888899
Q ss_pred HhhccCCccEEEEeC
Q 002256 457 RFHELVPVDGLWIDM 471 (946)
Q Consensus 457 ~~~~~~g~dg~W~Dm 471 (946)
++.+.+++||+|+||
T Consensus 118 Ei~~~y~~DGiF~D~ 132 (132)
T PF14871_consen 118 EILDRYDVDGIFFDI 132 (132)
T ss_pred HHHHcCCCCEEEecC
Confidence 998889999999998
No 34
>PLN02711 Probable galactinol--sucrose galactosyltransferase
Probab=95.95 E-value=0.73 Score=56.64 Aligned_cols=104 Identities=20% Similarity=0.320 Sum_probs=71.7
Q ss_pred EEEEeCCChHHHHHHHHhh----cCCC-----CCCCcccccceeccCC--CC--CHHHHHHHHHHHHHcCCCceEEEecC
Q 002256 293 FYFFAGPSPLAVVDQYTAF----IGRP-----APMPYWSLGFHQCRWG--YH--NLSVVEDVVENYKKAKIPLDVIWNDD 359 (946)
Q Consensus 293 ~y~f~Gp~p~~vi~qY~~l----tG~p-----~lpP~WalG~hq~r~g--Y~--~~~~v~~vv~~~~~~~IPlD~iw~Di 359 (946)
+|+-.|.+|-+++++=.+. .|.- .-+|..-=||=.|.|. |. +.+.|++-++.+++.|||...+.+|+
T Consensus 174 ~~i~~g~~Py~~i~~A~~~~~~~l~tf~~reeK~~P~~~D~fGWCTWdAfy~~Vt~egI~~gl~~L~~~Gip~~~vIIDD 253 (777)
T PLN02711 174 LYMHAGDDPYKLVKDAMKVVRVHLGTFKLLEEKTPPGIVDKFGWCTWDAFYLTVHPQGVWEGVKGLVDGGCPPGLVLIDD 253 (777)
T ss_pred EEEEcCCCHHHHHHHHHHHHHHHhcccchhhhccCCcccccceEEehhHhcccCCHHHHHHHHHHHHhCCCCccEEEEcC
Confidence 5777899999998876443 3321 1234333355568885 43 66889999999999999999999999
Q ss_pred CCCCCc-------------------------eeeeeC---------CCCCCChhHHHHHHHHHHc--CCEEEEE
Q 002256 360 DHMDGH-------------------------KDFTLN---------PTNYPRPKLLAFLEKIHKI--GMKYIVI 397 (946)
Q Consensus 360 dym~~~-------------------------~~Ft~d---------~~~FP~p~l~~~v~~Lh~~--g~k~v~i 397 (946)
.|.+-. ..|.=| ++.||. .|+.+|+.|+++ |+|+|-.
T Consensus 254 GWQsi~~d~~~~~~~~~~~~~~~g~q~~~rL~~f~en~KF~~~~~~~~~~p~-Glk~~v~~iK~~~~~vk~VyV 326 (777)
T PLN02711 254 GWQSICHDEDPISDQEGMNRTVAGEQMPCRLLKFEENYKFRDYVSPKSLSNK-GMGAFIRDLKEEFKTVDYVYV 326 (777)
T ss_pred CcccccccCcccccccccccccccchhhhhhccccccccccccccccCCCCC-cHHHHHHHHHhhCCCCCEEEE
Confidence 987511 123333 233453 689999999984 6888754
No 35
>PLN02684 Probable galactinol--sucrose galactosyltransferase
Probab=95.19 E-value=0.36 Score=59.06 Aligned_cols=104 Identities=17% Similarity=0.320 Sum_probs=75.4
Q ss_pred EEEEeCCChHHHHHHHHhhcCCC---------CCCCcccccceeccCC--CC--CHHHHHHHHHHHHHcCCCceEEEecC
Q 002256 293 FYFFAGPSPLAVVDQYTAFIGRP---------APMPYWSLGFHQCRWG--YH--NLSVVEDVVENYKKAKIPLDVIWNDD 359 (946)
Q Consensus 293 ~y~f~Gp~p~~vi~qY~~ltG~p---------~lpP~WalG~hq~r~g--Y~--~~~~v~~vv~~~~~~~IPlD~iw~Di 359 (946)
.|+-.|.+|-++|++=.+.+-+. .-+|.|-=||=.|.|. |. +.+.|++.++.+.+.++|..-+-+|+
T Consensus 163 ~~v~~g~~Py~~i~~a~~~v~~~l~tf~~reeK~~P~~~D~fGWCTWdafy~dVt~~~I~~~l~~l~~~g~p~~~vIIDD 242 (750)
T PLN02684 163 LFIHAGTDPFQTITDAIRAVKLHLKSFRQRHEKKLPGIVDYFGWCTWDAFYQEVTQEGVEAGLKSLAAGGTPPKFVIIDD 242 (750)
T ss_pred EEEecCCCHHHHHHHHHHHHHHHhhccchhhhccCccccceeeEEEhhHhhccCCHHHHHHHHHHHHhCCCCceEEEEec
Confidence 47778999999988764332211 2256777677778885 33 66789999999999999999999999
Q ss_pred CCCCCce-------------------eeeeCCCCCCC-----hhHHHHHHHHH-HcCCEEEEE
Q 002256 360 DHMDGHK-------------------DFTLNPTNYPR-----PKLLAFLEKIH-KIGMKYIVI 397 (946)
Q Consensus 360 dym~~~~-------------------~Ft~d~~~FP~-----p~l~~~v~~Lh-~~g~k~v~i 397 (946)
.|..-.. .|.=+ ++||+ ..|+.+|++|+ +.|+|+|-.
T Consensus 243 GwQs~~~d~~~~~~~~~~~q~~~rL~~f~en-~KF~~~~~p~~Glk~~V~~iK~~~~vk~V~V 304 (750)
T PLN02684 243 GWQSVGGDPTVEAGDEKKEQPLLRLTGIKEN-EKFKKKDDPNVGIKNIVNIAKEKHGLKYVYV 304 (750)
T ss_pred ccccccccccccccccccchhhhhhccCccc-cccccccCCCccHHHHHHHHHhhcCCcEEEE
Confidence 9974221 13222 45654 57999999998 568988753
No 36
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function.
Probab=93.91 E-value=0.73 Score=51.99 Aligned_cols=131 Identities=15% Similarity=0.218 Sum_probs=81.0
Q ss_pred CHHHHHHHHHHHHHcCCCceEEEecCCCC------CCc----eeeeeCCC---CCCChhHHHHHHHHHHcCCEEEEEeCC
Q 002256 334 NLSVVEDVVENYKKAKIPLDVIWNDDDHM------DGH----KDFTLNPT---NYPRPKLLAFLEKIHKIGMKYIVIIDP 400 (946)
Q Consensus 334 ~~~~v~~vv~~~~~~~IPlD~iw~Didym------~~~----~~Ft~d~~---~FP~p~l~~~v~~Lh~~g~k~v~iidP 400 (946)
+.+++.++++.++++| +-+|+.+.-.. ... ...|-.+. .| || |+.+|++-|++|+++-.|+..
T Consensus 17 ~~~~~~~~l~~l~~~~--~N~V~~qVr~~gda~Y~S~~~p~s~~~~g~~~~~pg~-Dp-L~~~I~eaHkrGlevHAW~~~ 92 (311)
T PF02638_consen 17 SKEQIDEMLDDLKSAG--FNAVFVQVRPRGDALYPSDIEPWSGYLTGKQGKDPGF-DP-LEFMIEEAHKRGLEVHAWFRV 92 (311)
T ss_pred CHHHHHHHHHHHHHcC--CCEEEEEEEeCcEEEecccccccccccCCCCCCCCCc-cH-HHHHHHHHHHcCCEEEEEEEe
Confidence 6888999999999999 55555443211 000 11111111 12 34 789999999999999999954
Q ss_pred CCccCCCcHHhHhcccCcEEE-eeCCcceEEEecCCcccccCCCCHHHHHHHHHHHHHhhccCCccEEEEe
Q 002256 401 GIGVNSSYGVYQRGIANDVFI-KYEGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHELVPVDGLWID 470 (946)
Q Consensus 401 ~I~~~~~y~~y~~g~~~~~fi-k~~g~~~~g~~WpG~~~~pDf~np~a~~ww~~~~~~~~~~~g~dg~W~D 470 (946)
++.........+. ....+. +..|....-..=.|...|.|-.+|+++++-.+.++++.....+||+=+|
T Consensus 93 ~~~~~~~~~~~~~--~p~~~~~~~~~~~~~~~~~~~~~~~lnP~~PeVr~~i~~~v~Eiv~~YdvDGIhlD 161 (311)
T PF02638_consen 93 GFNAPDVSHILKK--HPEWFAVNHPGWVRTYEDANGGYYWLNPGHPEVRDYIIDIVKEIVKNYDVDGIHLD 161 (311)
T ss_pred ecCCCchhhhhhc--CchhheecCCCceeecccCCCCceEECCCCHHHHHHHHHHHHHHHhcCCCCeEEec
Confidence 4432211111111 111222 2222211100002456799999999999999999999988999999998
No 37
>TIGR02456 treS_nterm trehalose synthase. Trehalose synthase interconverts maltose and alpha, alpha-trehalose by transglucosylation. This is one of at least three mechanisms for biosynthesis of trehalose, an important and widespread compatible solute. However, it is not driven by phosphate activation of sugars and its physiological role may tend toward trehalose degradation. This view is accentuated by numerous examples of fusion to a probable maltokinase domain. The sequence region described by this model is found both as the whole of a trehalose synthase and as the N-terminal region of a larger fusion protein that includes trehalose synthase activity. Several of these fused trehalose synthases have a domain homologous to proteins with maltokinase activity from Actinoplanes missouriensis and Streptomyces coelicolor (PubMed:15378530).
Probab=93.31 E-value=1.2 Score=54.13 Aligned_cols=134 Identities=19% Similarity=0.278 Sum_probs=81.6
Q ss_pred CCHHHHHHHHHHHHHcCCCceEEEecCCCC-----CCc--ee-eeeCCCCCCC-hhHHHHHHHHHHcCCEEEEEeCC-CC
Q 002256 333 HNLSVVEDVVENYKKAKIPLDVIWNDDDHM-----DGH--KD-FTLNPTNYPR-PKLLAFLEKIHKIGMKYIVIIDP-GI 402 (946)
Q Consensus 333 ~~~~~v~~vv~~~~~~~IPlD~iw~Didym-----~~~--~~-Ft~d~~~FP~-p~l~~~v~~Lh~~g~k~v~iidP-~I 402 (946)
.+...+.+-++.+++ +-+++||+-.=+- .+| .| |.+|+ +|-. .++++||+++|++|+|+|+=+-+ |+
T Consensus 25 Gdl~gi~~~Ldyl~~--LGv~~i~L~Pi~~~~~~~~gY~~~dy~~vd~-~~Gt~~df~~Lv~~ah~~Gi~vilD~V~NH~ 101 (539)
T TIGR02456 25 GDFPGLTSKLDYLKW--LGVDALWLLPFFQSPLRDDGYDVSDYRAILP-EFGTIDDFKDFVDEAHARGMRVIIDLVLNHT 101 (539)
T ss_pred cCHHHHHHhHHHHHH--CCCCEEEECCCcCCCCCCCCCCcccccccCh-hhCCHHHHHHHHHHHHHCCCEEEEEeccCcC
Confidence 466666666666665 6678888753221 111 22 34554 3433 36899999999999999986554 55
Q ss_pred ccCCCcHHhHhcc------cCcEEEee-CCcceEE----------EecC---C-----------cccccCCCCHHHHHHH
Q 002256 403 GVNSSYGVYQRGI------ANDVFIKY-EGEPYLA----------QVWP---G-----------AVNFPDFLNPKTVSWW 451 (946)
Q Consensus 403 ~~~~~y~~y~~g~------~~~~fik~-~g~~~~g----------~~Wp---G-----------~~~~pDf~np~a~~ww 451 (946)
+.+ .+.|+++. ..++|+.. .+..+.+ ..|. + ...-.|+.||+++++.
T Consensus 102 s~~--~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~y~~~f~~~~pdln~~np~vr~~l 179 (539)
T TIGR02456 102 SDQ--HPWFQEARSNPDGPYRDFYVWSDTDEKYKDTRIIFVDTEKSNWTFDPVAKQYYWHRFFSHQPDLNYDNPAVHDAV 179 (539)
T ss_pred CCC--CHHHHHHhhCCCCCCCceEEecCCCcccccccccccccCCCCccccCCcCeeEEecccCCCCccCCCCHHHHHHH
Confidence 432 34444332 23666642 1221111 1121 1 0113577899999999
Q ss_pred HHHHHHhhccCCccEEEEeCC
Q 002256 452 GDEIRRFHELVPVDGLWIDMN 472 (946)
Q Consensus 452 ~~~~~~~~~~~g~dg~W~Dmn 472 (946)
.+.++.+.+ .|||||=+|+-
T Consensus 180 ~~~~~~w~~-~GvDGfRlDav 199 (539)
T TIGR02456 180 HDVMRFWLD-LGVDGFRLDAV 199 (539)
T ss_pred HHHHHHHHH-cCCCEEEEecH
Confidence 998888886 79999999973
No 38
>PF13199 Glyco_hydro_66: Glycosyl hydrolase family 66; PDB: 3VMO_A 3VMN_A 3VMP_A.
Probab=93.22 E-value=0.25 Score=59.61 Aligned_cols=133 Identities=18% Similarity=0.265 Sum_probs=71.2
Q ss_pred CCHHHHHHHHHHHHHcCCCceEEEecCCCCCCce-eeeeCC----CCCCC--------hhHHHHHHHHHHcCCEEEEEeC
Q 002256 333 HNLSVVEDVVENYKKAKIPLDVIWNDDDHMDGHK-DFTLNP----TNYPR--------PKLLAFLEKIHKIGMKYIVIID 399 (946)
Q Consensus 333 ~~~~~v~~vv~~~~~~~IPlD~iw~Didym~~~~-~Ft~d~----~~FP~--------p~l~~~v~~Lh~~g~k~v~iid 399 (946)
++.++.++.++.+.+..|-.= ++- |||.+.. -+.-+. ..|++ ..++++|+.+|+.|++.+...-
T Consensus 115 ~~~~~~~~~i~~L~~yHIN~~-QFY--DW~~rH~~Pl~~~~~~~~~~w~D~~~r~i~~~~Vk~yI~~ah~~Gmkam~Ynm 191 (559)
T PF13199_consen 115 KSAEDIEAEIDQLNRYHINGL-QFY--DWMYRHHKPLPGTNGQPDQTWTDWANRQISTSTVKDYINAAHKYGMKAMAYNM 191 (559)
T ss_dssp GGHHHHHHHHHHHHHTT--EE-EET--S--SBTTB-S-SSS-EEE-TT-TTT--EEEHHHHHHHHHHHHHTT-EEEEEEE
T ss_pred CCchhHHHHHHHHHhhCcCeE-EEE--eeccccCCcCCCCCCchhhhhhhhcCCEehHHHHHHHHHHHHHcCcceehhHh
Confidence 366788889999988777642 222 3332210 000000 12222 2478999999999999998743
Q ss_pred CCCccCCCcHHhHhcccCcEEE-e-eCCcc---e-EEEecCCcccccCCCCHHHHHHHHHHHHHhhccCCccEEEEeC
Q 002256 400 PGIGVNSSYGVYQRGIANDVFI-K-YEGEP---Y-LAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHELVPVDGLWIDM 471 (946)
Q Consensus 400 P~I~~~~~y~~y~~g~~~~~fi-k-~~g~~---~-~g~~WpG~~~~pDf~np~a~~ww~~~~~~~~~~~g~dg~W~Dm 471 (946)
-. ....+|.. .|+....++ + ..+.. + ++..|+..-.+.|-.||.=++++.+++++.++..|||||=+|.
T Consensus 192 iy-aa~~~~~~--~gv~~eW~ly~d~~~~~~~~~~l~~~w~s~lyl~dP~N~~WQ~yI~~q~~~~~~~~gFDG~hlDq 266 (559)
T PF13199_consen 192 IY-AANNNYEE--DGVSPEWGLYKDDSHSNQDTYDLPDGWPSDLYLMDPGNPEWQNYIINQMNKAIQNFGFDGWHLDQ 266 (559)
T ss_dssp SS-EEETT--S----SS-GGBEEESSSBTSB-EEEETT-E--EEEEB-TT-HHHHHHHHHHHHHHHHHHT--EEEEE-
T ss_pred hh-ccccCccc--ccCCchhhhhhccCCCccceeecCcccccceEEecCCCHHHHHHHHHHHHHHHHccCCceEeeec
Confidence 22 22233332 344333333 2 22311 1 3455777678899999999999999999888889999999995
No 39
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase. A sequence from Arabidopsis thaliana, GP|9294564, scores just above trusted, but appears either to contain corrupt sequence or, more likely, to be a pseudogene as some of the conserved catalytic residues common to the alpha amylase family are not conserved here.
Probab=92.76 E-value=1 Score=55.66 Aligned_cols=93 Identities=17% Similarity=0.280 Sum_probs=59.4
Q ss_pred CCCCh-hHHHHHHHHHHcCCEEEEEeCC-CCccCCC-cHHhHhcccCcEEEeeCCcceEEEecCCcccccCCCCHHHHHH
Q 002256 374 NYPRP-KLLAFLEKIHKIGMKYIVIIDP-GIGVNSS-YGVYQRGIANDVFIKYEGEPYLAQVWPGAVNFPDFLNPKTVSW 450 (946)
Q Consensus 374 ~FP~p-~l~~~v~~Lh~~g~k~v~iidP-~I~~~~~-y~~y~~g~~~~~fik~~g~~~~g~~WpG~~~~pDf~np~a~~w 450 (946)
+|..+ +|++||+.+|++|+++|+=+-+ |...+.. ...|+ + ..-++.. +........|. +.-.|+.||+++++
T Consensus 201 ~~Gt~~dlk~lV~~~H~~Gi~VilD~V~NH~~~~~~~~~~~~-~-~~~y~~~-~~~~~~~~~w~--~~~~~~~~~~Vr~~ 275 (613)
T TIGR01515 201 RFGTPDDFMYFVDACHQAGIGVILDWVPGHFPKDDHGLAEFD-G-TPLYEHK-DPRDGEHWDWG--TLIFDYGRPEVRNF 275 (613)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEecccCcCCccchhhccC-C-Ccceecc-CCccCcCCCCC--CceecCCCHHHHHH
Confidence 56544 5899999999999999997655 4443311 11111 0 0011111 11100011232 33469999999999
Q ss_pred HHHHHHHhhccCCccEEEEeC
Q 002256 451 WGDEIRRFHELVPVDGLWIDM 471 (946)
Q Consensus 451 w~~~~~~~~~~~g~dg~W~Dm 471 (946)
..+.++.+.+..+||||=+|+
T Consensus 276 l~~~~~~W~~ey~iDG~R~D~ 296 (613)
T TIGR01515 276 LVANALYWAEFYHIDGLRVDA 296 (613)
T ss_pred HHHHHHHHHHHhCCcEEEEcC
Confidence 999999999889999999997
No 40
>PRK10785 maltodextrin glucosidase; Provisional
Probab=92.35 E-value=1.2 Score=54.65 Aligned_cols=131 Identities=18% Similarity=0.265 Sum_probs=81.0
Q ss_pred CHHHHHHHHHHHHHcCCCceEEEecCCCC--CCc----ee-eeeCCCCCCC-hhHHHHHHHHHHcCCEEEEEeCC-CCcc
Q 002256 334 NLSVVEDVVENYKKAKIPLDVIWNDDDHM--DGH----KD-FTLNPTNYPR-PKLLAFLEKIHKIGMKYIVIIDP-GIGV 404 (946)
Q Consensus 334 ~~~~v~~vv~~~~~~~IPlD~iw~Didym--~~~----~~-Ft~d~~~FP~-p~l~~~v~~Lh~~g~k~v~iidP-~I~~ 404 (946)
+..-|.+-++.+++ +-+++||+-.=+- ... .| +..|+ +|.. .++++||+++|++|+|+|+=+-+ |.+.
T Consensus 177 Dl~GI~~kLdYL~~--LGv~~I~L~Pif~s~s~hgYd~~Dy~~iDp-~~Gt~~df~~Lv~~aH~rGikVilD~V~NH~~~ 253 (598)
T PRK10785 177 DLDGISEKLPYLKK--LGVTALYLNPIFTAPSVHKYDTEDYRHVDP-QLGGDAALLRLRHATQQRGMRLVLDGVFNHTGD 253 (598)
T ss_pred CHHHHHHHHHHHHH--cCCCEEEeCCcccCCCCCCcCcccccccCc-ccCCHHHHHHHHHHHHHCCCEEEEEECCCcCCC
Confidence 66666666666665 5668899863221 111 12 23444 3333 46899999999999999985544 4443
Q ss_pred CCCcHHhHhc-------------ccCcEEEee-CCcceEEEecCCccccc--CCCCHHHHHHHHH----HHHHhhcc-CC
Q 002256 405 NSSYGVYQRG-------------IANDVFIKY-EGEPYLAQVWPGAVNFP--DFLNPKTVSWWGD----EIRRFHEL-VP 463 (946)
Q Consensus 405 ~~~y~~y~~g-------------~~~~~fik~-~g~~~~g~~WpG~~~~p--Df~np~a~~ww~~----~~~~~~~~-~g 463 (946)
+ ..-|++. ...++|.-. +|. + .+|-|....| |+.||+++++..+ .++.+.+. .|
T Consensus 254 ~--~~~f~~~~~~~~ga~~~~~spy~dwf~~~~~~~-~--~~w~g~~~lPdLN~~np~v~~~l~~~~~~v~~~Wl~~~~g 328 (598)
T PRK10785 254 S--HPWFDRHNRGTGGACHHPDSPWRDWYSFSDDGR-A--LDWLGYASLPKLDFQSEEVVNEIYRGEDSIVRHWLKAPYN 328 (598)
T ss_pred C--CHHHHHhhccccccccCCCCCcceeeEECCCCC-c--CCcCCCCcCccccCCCHHHHHHHHhhhhHHHHHhhcCCCC
Confidence 2 2333321 123455432 232 1 4677765666 4689999998874 56777775 79
Q ss_pred ccEEEEeCC
Q 002256 464 VDGLWIDMN 472 (946)
Q Consensus 464 ~dg~W~Dmn 472 (946)
+|||=+|.-
T Consensus 329 iDG~RlDva 337 (598)
T PRK10785 329 IDGWRLDVV 337 (598)
T ss_pred CcEEEEecH
Confidence 999999975
No 41
>PF05691 Raffinose_syn: Raffinose synthase or seed imbibition protein Sip1; InterPro: IPR008811 This family consists of several raffinose synthase proteins, also known as seed imbibition (Sip1) proteins. Raffinose (O-alpha- D-galactopyranosyl- (1-->6)- O-alpha- D-glucopyranosyl-(1-->2)- O-beta- D-fructofuranoside) is a widespread oligosaccharide in plant seeds and other tissues. Raffinose synthase (2.4.1.82 from EC) is the key enzyme that channels sucrose into the raffinose oligosaccharide pathway [].
Probab=92.20 E-value=3.7 Score=51.04 Aligned_cols=105 Identities=22% Similarity=0.501 Sum_probs=73.2
Q ss_pred EEEEEeCCChHHHHHHHHhhc----C-----CCCCCCcccccceeccCC--CC--CHHHHHHHHHHHHHcCCCceEEEec
Q 002256 292 DFYFFAGPSPLAVVDQYTAFI----G-----RPAPMPYWSLGFHQCRWG--YH--NLSVVEDVVENYKKAKIPLDVIWND 358 (946)
Q Consensus 292 D~y~f~Gp~p~~vi~qY~~lt----G-----~p~lpP~WalG~hq~r~g--Y~--~~~~v~~vv~~~~~~~IPlD~iw~D 358 (946)
=.|+-.|.+|-+++++=.+.. + .-.-+|.|-=||=.|.|. |. +.+.|++.++.+++.|||.-.+.+|
T Consensus 155 ~l~v~~g~dPy~~i~~A~~~~~~~l~tf~~r~~K~~P~~~d~lGwCTWdaf~~~v~~~~i~~~l~~L~~~gi~~~~viID 234 (747)
T PF05691_consen 155 ALYVHAGDDPYELIREAVKAVRKHLGTFRLREEKKYPEFLDGLGWCTWDAFYQDVTEEGILEGLKSLEEGGIPPRFVIID 234 (747)
T ss_pred EEEEeccCCHHHHHHHHHHHHHhcccccccccccchhhhhhhhccccHHHhccccCHHHHHHHHHHHHhCCCCceEEEEe
Confidence 345567899999887754432 1 222356676677779995 33 6778999999999999999999999
Q ss_pred CCCCCCce-----------------eee-----e--------C-----CCCCCChhHHHHHHHHHHc--CCEEEEE
Q 002256 359 DDHMDGHK-----------------DFT-----L--------N-----PTNYPRPKLLAFLEKIHKI--GMKYIVI 397 (946)
Q Consensus 359 idym~~~~-----------------~Ft-----~--------d-----~~~FP~p~l~~~v~~Lh~~--g~k~v~i 397 (946)
+.|.+-.. .|. + + ++.||. .|+.+|++++++ |+|+|-.
T Consensus 235 DGWQ~~~~~~~~~~~~~~~~~~~g~q~~~rl~~~~en~kF~~~~~~~~~~~~~~-GL~~~V~~ik~~~~~Ik~V~V 309 (747)
T PF05691_consen 235 DGWQSVDNDGDDPSKDGMNLVQEGAQFPRRLTDFKENSKFRAYKSGKSPEAFPS-GLKHFVSDIKEKFPGIKYVYV 309 (747)
T ss_pred cchhcccccCcccccccccccccccccchhhhhhhhhhhhhhccCCCcccCCcc-cHHHHHHHHHhhCCCCCEEEE
Confidence 99874211 110 1 1 124665 689999999997 7888754
No 42
>PRK10933 trehalose-6-phosphate hydrolase; Provisional
Probab=92.18 E-value=1.3 Score=53.89 Aligned_cols=134 Identities=16% Similarity=0.293 Sum_probs=77.1
Q ss_pred CHHHHHHHHHHHHHcCCCceEEEecCCCCC-----Cc--ee-eeeCCCCCCC-hhHHHHHHHHHHcCCEEEEEeCC-CCc
Q 002256 334 NLSVVEDVVENYKKAKIPLDVIWNDDDHMD-----GH--KD-FTLNPTNYPR-PKLLAFLEKIHKIGMKYIVIIDP-GIG 403 (946)
Q Consensus 334 ~~~~v~~vv~~~~~~~IPlD~iw~Didym~-----~~--~~-Ft~d~~~FP~-p~l~~~v~~Lh~~g~k~v~iidP-~I~ 403 (946)
+...+.+-++.+++ +-+++||+-.=+-. +| .| +..|+ +|-. .++++||+++|++|+|+|+=+-+ |.+
T Consensus 31 dl~gi~~~ldyl~~--lGv~~i~l~P~~~~~~~~~gY~~~d~~~id~-~~Gt~~d~~~lv~~~h~~gi~vilD~V~NH~s 107 (551)
T PRK10933 31 DLRGVTQRLDYLQK--LGVDAIWLTPFYVSPQVDNGYDVANYTAIDP-TYGTLDDFDELVAQAKSRGIRIILDMVFNHTS 107 (551)
T ss_pred CHHHHHHhhHHHHh--CCCCEEEECCCCCCCCCCCCCCcccCCCcCc-ccCCHHHHHHHHHHHHHCCCEEEEEECCCCcc
Confidence 55556666666655 45577887432211 11 22 23443 3332 36899999999999999986655 444
Q ss_pred cCCCcHHhHhcc-----cCcEEEeeCCc------ce----EEEec--CC------------cccccCCCCHHHHHHHHHH
Q 002256 404 VNSSYGVYQRGI-----ANDVFIKYEGE------PY----LAQVW--PG------------AVNFPDFLNPKTVSWWGDE 454 (946)
Q Consensus 404 ~~~~y~~y~~g~-----~~~~fik~~g~------~~----~g~~W--pG------------~~~~pDf~np~a~~ww~~~ 454 (946)
. ..+-|+++. -.++|+-.+|. .+ -+..| .. ...-+|+.||++++...+.
T Consensus 108 ~--~~~wf~~~~~~~~~y~d~y~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~y~~~f~~~~pdLn~~np~V~~~l~~~ 185 (551)
T PRK10933 108 T--QHAWFREALNKESPYRQFYIWRDGEPETPPNNWRSKFGGSAWRWHAESEQYYLHLFAPEQADLNWENPAVRAELKKV 185 (551)
T ss_pred C--chhHHHhhcCCCCCCcCceEecCCCCCCCCCcccccCCCccccccCCCCceEeecccccCCccCCCCHHHHHHHHHH
Confidence 2 223344332 13455432221 11 01111 11 0123567899999999998
Q ss_pred HHHhhccCCccEEEEeCCC
Q 002256 455 IRRFHELVPVDGLWIDMNE 473 (946)
Q Consensus 455 ~~~~~~~~g~dg~W~DmnE 473 (946)
++.+.+ .|||||=+|.-.
T Consensus 186 ~~~W~~-~GvDGfRlDa~~ 203 (551)
T PRK10933 186 CEFWAD-RGVDGLRLDVVN 203 (551)
T ss_pred HHHHHH-CCCcEEEEcchh
Confidence 888875 799999999643
No 43
>TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase. Trehalose is a glucose disaccharide that serves in many biological systems as a compatible solute for protection against hyperosmotic and thermal stress. This family describes trehalose-6-phosphate hydrolase, product of the treC (or treA) gene, which is often found together with a trehalose uptake transporter and a trehalose operon repressor.
Probab=91.44 E-value=2.8 Score=51.07 Aligned_cols=136 Identities=17% Similarity=0.284 Sum_probs=82.1
Q ss_pred CCHHHHHHHHHHHHHcCCCceEEEecCCCCC-----Cc--ee-eeeCCCCCCChhHHHHHHHHHHcCCEEEEEeCC-CCc
Q 002256 333 HNLSVVEDVVENYKKAKIPLDVIWNDDDHMD-----GH--KD-FTLNPTNYPRPKLLAFLEKIHKIGMKYIVIIDP-GIG 403 (946)
Q Consensus 333 ~~~~~v~~vv~~~~~~~IPlD~iw~Didym~-----~~--~~-Ft~d~~~FP~p~l~~~v~~Lh~~g~k~v~iidP-~I~ 403 (946)
.+...+.+-++.+++ +-+++||+-.-+.. +| .| +.+|+.-=...++++||+++|++|+|+|+=+-| |.+
T Consensus 24 G~~~gi~~~l~yl~~--lG~~~i~l~Pi~~~~~~~~gY~~~d~~~id~~~Gt~~~~~~lv~~ah~~gi~vilD~v~NH~~ 101 (543)
T TIGR02403 24 GDLRGIIEKLDYLKK--LGVDYIWLNPFYVSPQKDNGYDVSDYYAINPLFGTMADFEELVSEAKKRNIKIMLDMVFNHTS 101 (543)
T ss_pred cCHHHHHHhHHHHHH--cCCCEEEECCcccCCCCCCCCCccccCccCcccCCHHHHHHHHHHHHHCCCEEEEEECccccc
Confidence 356666666666655 56678988643321 22 22 345654222346899999999999999986655 554
Q ss_pred cCCCcHHhHhcc-----cCcEEEeeC--Cc---ce----EEEecCCc--------------ccccCCCCHHHHHHHHHHH
Q 002256 404 VNSSYGVYQRGI-----ANDVFIKYE--GE---PY----LAQVWPGA--------------VNFPDFLNPKTVSWWGDEI 455 (946)
Q Consensus 404 ~~~~y~~y~~g~-----~~~~fik~~--g~---~~----~g~~WpG~--------------~~~pDf~np~a~~ww~~~~ 455 (946)
. ..+-++++. -.++|+-.+ |. .+ -+..|.+. ..-+|+.||++++.-.+.+
T Consensus 102 ~--~~~~f~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~y~~~f~~~~pdln~~np~v~~~i~~~~ 179 (543)
T TIGR02403 102 T--EHEWFKKALAGDSPYRDFYIWRDPKGKPPTNWQSKFGGSAWEYFGDTGQYYLHLFDKTQADLNWENPEVREELKDVV 179 (543)
T ss_pred c--chHHHHHhhcCCCcccCceEecCCCCCCCCcccccCCCcCccccCCCCceEEeccCCcCCccCCCCHHHHHHHHHHH
Confidence 2 234444332 134554321 21 11 11224321 1125778999999988888
Q ss_pred HHhhccCCccEEEEeCCC
Q 002256 456 RRFHELVPVDGLWIDMNE 473 (946)
Q Consensus 456 ~~~~~~~g~dg~W~DmnE 473 (946)
+.+.+ .|||||=+|.-.
T Consensus 180 ~~W~~-~giDGfRlDa~~ 196 (543)
T TIGR02403 180 NFWRD-KGVDGFRLDVIN 196 (543)
T ss_pred HHHHH-cCCCEEEEeeeh
Confidence 87775 699999999753
No 44
>TIGR02103 pullul_strch alpha-1,6-glucosidases, pullulanase-type. Members of this protein family include secreted (or membrane-anchored) pullulanases of Gram-negative bacteria and pullulanase-type starch debranching enzymes of plants. Both enzymes hydrolyze alpha-1,6 glycosidic linkages. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family is closely homologous to, but architecturally different from, the Gram-positive pullulanases of Gram-positive bacteria (TIGR02102).
Probab=90.82 E-value=0.68 Score=58.91 Aligned_cols=89 Identities=11% Similarity=0.155 Sum_probs=57.9
Q ss_pred hHHHHHHHHHHcCCEEEEEeC-CCCccCC--CcHHhHhcccCcEEEee--CCcceEEEecCCcccccCCCCHHHHHHHHH
Q 002256 379 KLLAFLEKIHKIGMKYIVIID-PGIGVNS--SYGVYQRGIANDVFIKY--EGEPYLAQVWPGAVNFPDFLNPKTVSWWGD 453 (946)
Q Consensus 379 ~l~~~v~~Lh~~g~k~v~iid-P~I~~~~--~y~~y~~g~~~~~fik~--~g~~~~g~~WpG~~~~pDf~np~a~~ww~~ 453 (946)
++++||+.||++|+++|+=+= -|..... ....++ ....++|.+. +|......+|. -.+..||.++++..+
T Consensus 405 Efk~mV~alH~~Gi~VIlDVVyNHt~~~g~~~~s~ld-~~~P~YY~r~~~~G~~~n~~~~~----d~a~e~~~Vrk~iiD 479 (898)
T TIGR02103 405 EFREMVQALNKTGLNVVMDVVYNHTNASGPNDRSVLD-KIVPGYYHRLNEDGGVENSTCCS----NTATEHRMMAKLIVD 479 (898)
T ss_pred HHHHHHHHHHHCCCEEEEEeecccccccCccCccccc-ccCcHhhEeeCCCCCeecCCCCc----CCCCCCHHHHHHHHH
Confidence 689999999999999987443 2433210 001222 1233566653 34322222332 136789999999999
Q ss_pred HHHHhhccCCccEEEEeCC
Q 002256 454 EIRRFHELVPVDGLWIDMN 472 (946)
Q Consensus 454 ~~~~~~~~~g~dg~W~Dmn 472 (946)
.++.+.+.++||||=+|.-
T Consensus 480 sl~~W~~ey~VDGFRfDlm 498 (898)
T TIGR02103 480 SLVVWAKDYKVDGFRFDLM 498 (898)
T ss_pred HHHHHHHHcCCCEEEEech
Confidence 9999888899999999943
No 45
>COG1649 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=90.44 E-value=1.4 Score=51.15 Aligned_cols=143 Identities=16% Similarity=0.182 Sum_probs=90.1
Q ss_pred cceeccC---CCCCHHHHHHHHHHHHHcCCCc--eEEEecCC--CCCCceeeeeC------CCCCCChhHHHHHHHHHHc
Q 002256 324 GFHQCRW---GYHNLSVVEDVVENYKKAKIPL--DVIWNDDD--HMDGHKDFTLN------PTNYPRPKLLAFLEKIHKI 390 (946)
Q Consensus 324 G~hq~r~---gY~~~~~v~~vv~~~~~~~IPl--D~iw~Did--ym~~~~~Ft~d------~~~FP~p~l~~~v~~Lh~~ 390 (946)
|.|..+= .-.+..++.+.+++.++.|+-- =.+|.+=| |.....-+.-+ .+..=|| |+.+|++=|++
T Consensus 49 GvWltn~~~~v~~~~~el~~~ld~l~~ln~NTv~~qV~~~G~~lypS~~~p~s~~~~~~~~~~~g~Dp-La~~I~~AHkr 127 (418)
T COG1649 49 GVWLTNADSRVLFQRQELKDILDDLQKLNFNTVYPQVWNDGDALYPSAVLPWSDGLPGVLGVDPGYDP-LAFVIAEAHKR 127 (418)
T ss_pred eEEEecCCCcccccHHHHHHHHHHHHHcCCceeEEEEecCccccccccccccccCcCcccCCCCCCCh-HHHHHHHHHhc
Confidence 6665522 2347889999999999998754 23455543 44332222222 2223344 78999999999
Q ss_pred CCEEEEEeCCCCccCCCcHHhHhcccCcEEEe-eCCcceE-EEecCCcccccCCCCHHHHHHHHHHHHHhhccCCccEEE
Q 002256 391 GMKYIVIIDPGIGVNSSYGVYQRGIANDVFIK-YEGEPYL-AQVWPGAVNFPDFLNPKTVSWWGDEIRRFHELVPVDGLW 468 (946)
Q Consensus 391 g~k~v~iidP~I~~~~~y~~y~~g~~~~~fik-~~g~~~~-g~~WpG~~~~pDf~np~a~~ww~~~~~~~~~~~g~dg~W 468 (946)
|+++..|+.|+........ +.. ........ .+|..+. ..-|- ...|.|=.+|++++|-.+.+-+....+.+||+=
T Consensus 128 ~l~v~aWf~~~~~a~~~s~-~~~-~~p~~~~~~~~~~~~~~~~~~~-~~~~ldPg~Pevq~~i~~lv~evV~~YdvDGIQ 204 (418)
T COG1649 128 GLEVHAWFNPYRMAPPTSP-LTK-RHPHWLTTKRPGWVYVRHQGWG-KRVWLDPGIPEVQDFITSLVVEVVRNYDVDGIQ 204 (418)
T ss_pred CCeeeechhhcccCCCCCh-hHh-hCCCCcccCCCCeEEEecCCce-eeeEeCCCChHHHHHHHHHHHHHHhCCCCCcee
Confidence 9999999999876442211 111 11111111 2232221 11111 577899999999999999999988889999988
Q ss_pred Ee
Q 002256 469 ID 470 (946)
Q Consensus 469 ~D 470 (946)
+|
T Consensus 205 fD 206 (418)
T COG1649 205 FD 206 (418)
T ss_pred cc
Confidence 77
No 46
>PRK03705 glycogen debranching enzyme; Provisional
Probab=89.70 E-value=1.2 Score=55.21 Aligned_cols=89 Identities=26% Similarity=0.424 Sum_probs=58.9
Q ss_pred hHHHHHHHHHHcCCEEEEEeCC-CCccC---CCcHHhHhcccC-cEEEe-eCCcceEEEecCCcccccCCCCHHHHHHHH
Q 002256 379 KLLAFLEKIHKIGMKYIVIIDP-GIGVN---SSYGVYQRGIAN-DVFIK-YEGEPYLAQVWPGAVNFPDFLNPKTVSWWG 452 (946)
Q Consensus 379 ~l~~~v~~Lh~~g~k~v~iidP-~I~~~---~~y~~y~~g~~~-~~fik-~~g~~~~g~~WpG~~~~pDf~np~a~~ww~ 452 (946)
++++||+++|++|+++|+=+=. |.... ..+..+ ++... .+|.. .+|. | ..|.|...-+++.||.++++..
T Consensus 243 efk~LV~~~H~~GI~VIlDvV~NHt~~~~~~~~~~~~-~~~d~~~yy~~~~~g~-~--~~~~g~g~~ln~~~p~Vr~~ii 318 (658)
T PRK03705 243 EFRDAVKALHKAGIEVILDVVFNHSAELDLDGPTLSL-RGIDNRSYYWIREDGD-Y--HNWTGCGNTLNLSHPAVVDWAI 318 (658)
T ss_pred HHHHHHHHHHHCCCEEEEEEcccCccCcCCCCcchhc-ccCCCccceEECCCCC-c--CCCCCccCcccCCCHHHHHHHH
Confidence 6899999999999999885433 43321 001111 22222 23322 2332 2 2355544457888999999999
Q ss_pred HHHHHhhccCCccEEEEeC
Q 002256 453 DEIRRFHELVPVDGLWIDM 471 (946)
Q Consensus 453 ~~~~~~~~~~g~dg~W~Dm 471 (946)
+.++.+.+.++||||=+|.
T Consensus 319 d~l~~W~~e~gVDGFRfD~ 337 (658)
T PRK03705 319 DCLRYWVETCHVDGFRFDL 337 (658)
T ss_pred HHHHHHHHHhCCCEEEEEc
Confidence 9999998889999999994
No 47
>TIGR02104 pulA_typeI pullulanase, type I. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases.
Probab=89.11 E-value=1.7 Score=53.51 Aligned_cols=90 Identities=13% Similarity=0.184 Sum_probs=60.1
Q ss_pred hhHHHHHHHHHHcCCEEEEEeCC-CCccCCCcHHhHhcccCcEEEee--CCcceEEEecCCcccccCCCCHHHHHHHHHH
Q 002256 378 PKLLAFLEKIHKIGMKYIVIIDP-GIGVNSSYGVYQRGIANDVFIKY--EGEPYLAQVWPGAVNFPDFLNPKTVSWWGDE 454 (946)
Q Consensus 378 p~l~~~v~~Lh~~g~k~v~iidP-~I~~~~~y~~y~~g~~~~~fik~--~g~~~~g~~WpG~~~~pDf~np~a~~ww~~~ 454 (946)
.++++||+++|++|+++|+=+-+ |..... ...|+. ...++|.+. +|... .+.|...-.++.||.++++..+.
T Consensus 229 ~efk~lV~~~H~~Gi~VilDvV~NH~~~~~-~~~f~~-~~~~~~~~~~~~g~~~---~~~g~~~~~~~~~~~v~~~i~~~ 303 (605)
T TIGR02104 229 RELKQMIQALHENGIRVIMDVVYNHTYSRE-ESPFEK-TVPGYYYRYNEDGTLS---NGTGVGNDTASEREMMRKFIVDS 303 (605)
T ss_pred HHHHHHHHHHHHCCCEEEEEEEcCCccCCC-CCcccC-CCCCeeEEECCCCCcc---CCCcccCCcccCCHHHHHHHHHH
Confidence 36999999999999999885544 443211 123432 334555542 23211 12222234677899999999999
Q ss_pred HHHhhccCCccEEEEeCC
Q 002256 455 IRRFHELVPVDGLWIDMN 472 (946)
Q Consensus 455 ~~~~~~~~g~dg~W~Dmn 472 (946)
++.+.+..+||||=+|.-
T Consensus 304 ~~~W~~e~~iDGfR~D~~ 321 (605)
T TIGR02104 304 VLYWVKEYNIDGFRFDLM 321 (605)
T ss_pred HHHHHHHcCCCEEEEech
Confidence 998888899999999954
No 48
>TIGR02100 glgX_debranch glycogen debranching enzyme GlgX. This family consists of the GlgX protein from the E. coli glycogen operon and probable equivalogs from other prokaryotic species. GlgX is not required for glycogen biosynthesis, but instead acts as a debranching enzyme for glycogen catabolism. This model distinguishes GlgX from pullanases and other related proteins that also operate on alpha-1,6-glycosidic linkages. In the wide band between the trusted and noise cutoffs are functionally similar enzymes, mostly from plants, that act similarly but usually are termed isoamylase.
Probab=89.03 E-value=1.5 Score=54.80 Aligned_cols=92 Identities=18% Similarity=0.315 Sum_probs=59.0
Q ss_pred hhHHHHHHHHHHcCCEEEEEeCC-CCccCCCc---HHhHhcccCcEEEe-e-CC-cceEEEecCCcccccCCCCHHHHHH
Q 002256 378 PKLLAFLEKIHKIGMKYIVIIDP-GIGVNSSY---GVYQRGIANDVFIK-Y-EG-EPYLAQVWPGAVNFPDFLNPKTVSW 450 (946)
Q Consensus 378 p~l~~~v~~Lh~~g~k~v~iidP-~I~~~~~y---~~y~~g~~~~~fik-~-~g-~~~~g~~WpG~~~~pDf~np~a~~w 450 (946)
.++++||+.+|++|+++|+=+-+ |....... ..| ++.....|.+ . ++ ..| ..|-|...-+|+.||.++++
T Consensus 245 ~efk~LV~~~H~~GI~VIlDvV~NHt~~~~~~~~~~~~-~~~d~~~yy~~~~~~~~~~--~~~~g~gn~ln~~~p~vr~~ 321 (688)
T TIGR02100 245 AEFKTMVRALHDAGIEVILDVVYNHTAEGNELGPTLSF-RGIDNASYYRLQPDDKRYY--INDTGTGNTLNLSHPRVLQM 321 (688)
T ss_pred HHHHHHHHHHHHCCCEEEEEECcCCccCcCCCCCcccc-cCCCCCcceEecCCCCcee--cCCCCccccccCCCHHHHHH
Confidence 36899999999999999885544 33321100 111 2222233333 1 11 112 12333334579999999999
Q ss_pred HHHHHHHhhccCCccEEEEeCC
Q 002256 451 WGDEIRRFHELVPVDGLWIDMN 472 (946)
Q Consensus 451 w~~~~~~~~~~~g~dg~W~Dmn 472 (946)
..+.++.+.+..|||||=+|..
T Consensus 322 i~d~l~~W~~e~gIDGfR~D~a 343 (688)
T TIGR02100 322 VMDSLRYWVTEMHVDGFRFDLA 343 (688)
T ss_pred HHHHHHHHHHHcCCcEEEEech
Confidence 9999998888899999999954
No 49
>COG1523 PulA Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism]
Probab=88.31 E-value=1.8 Score=53.77 Aligned_cols=91 Identities=20% Similarity=0.249 Sum_probs=66.1
Q ss_pred hHHHHHHHHHHcCCEEEEE-eCCCCccC--CCcHHhHhcccCcEEEee--CCcceEEEecCCcccccCCCCHHHHHHHHH
Q 002256 379 KLLAFLEKIHKIGMKYIVI-IDPGIGVN--SSYGVYQRGIANDVFIKY--EGEPYLAQVWPGAVNFPDFLNPKTVSWWGD 453 (946)
Q Consensus 379 ~l~~~v~~Lh~~g~k~v~i-idP~I~~~--~~y~~y~~g~~~~~fik~--~g~~~~g~~WpG~~~~pDf~np~a~~ww~~ 453 (946)
+++.||+.||++|+.+|+= |=.|.... .+-..--+++..++|... +|.. .-|.|-..-+.-.||-+++|--+
T Consensus 266 EfK~mV~~lHkaGI~VILDVVfNHTae~~~~g~t~~f~~id~~~Yyr~~~dg~~---~N~TGcGNtln~~hpmvrk~ivD 342 (697)
T COG1523 266 EFKDMVKALHKAGIEVILDVVFNHTAEGNELGPTLSFRGIDPNYYYRLDPDGYY---SNGTGCGNTLNTEHPMVRKLIVD 342 (697)
T ss_pred HHHHHHHHHHHcCCEEEEEEeccCcccccCcCcccccccCCcCceEEECCCCCe---ecCCccCcccccCChHHHHHHHH
Confidence 6899999999999999873 33444210 000111367888877662 4432 23666666788899999999999
Q ss_pred HHHHhhccCCccEEEEeCC
Q 002256 454 EIRRFHELVPVDGLWIDMN 472 (946)
Q Consensus 454 ~~~~~~~~~g~dg~W~Dmn 472 (946)
.++-+.+.+.||||=.|+.
T Consensus 343 sLrYWv~e~hVDGFRFDLa 361 (697)
T COG1523 343 SLRYWVEEYHVDGFRFDLA 361 (697)
T ss_pred HHHHHHHHhCCCceeecch
Confidence 9999999999999999985
No 50
>PRK14510 putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme; Provisional
Probab=88.25 E-value=1.5 Score=58.13 Aligned_cols=94 Identities=21% Similarity=0.360 Sum_probs=61.7
Q ss_pred hhHHHHHHHHHHcCCEEEEEeCC-CCccCCCcHHh--HhcccCcEEEe-eCCcceEEEecCCcccccCCCCHHHHHHHHH
Q 002256 378 PKLLAFLEKIHKIGMKYIVIIDP-GIGVNSSYGVY--QRGIANDVFIK-YEGEPYLAQVWPGAVNFPDFLNPKTVSWWGD 453 (946)
Q Consensus 378 p~l~~~v~~Lh~~g~k~v~iidP-~I~~~~~y~~y--~~g~~~~~fik-~~g~~~~g~~WpG~~~~pDf~np~a~~ww~~ 453 (946)
.++++||+.+|++|+++|+=+=+ |...+..+.+. .++.+...|.. ..+.+..-..|.|....||+.||.++++-.+
T Consensus 247 ~efk~lV~~~H~~GI~VILDvV~NHt~~~~~~~p~~~~~~~d~~~yy~~~~~~~~~y~~~~G~gn~~n~~~p~v~~~i~d 326 (1221)
T PRK14510 247 EEFAQAIKEAQSAGIAVILDVVFNHTGESNHYGPTLSAYGSDNSPYYRLEPGNPKEYENWWGCGNLPNLERPFILRLPMD 326 (1221)
T ss_pred HHHHHHHHHHHHCCCEEEEEEccccccCCCCCCCcccccCCCCCCceEecCCCCCcccCCCCCCCccccCCHHHHHHHHH
Confidence 46899999999999999885443 44322211110 11222233322 2222211234557667899999999999999
Q ss_pred HHHHhhccCCccEEEEeCC
Q 002256 454 EIRRFHELVPVDGLWIDMN 472 (946)
Q Consensus 454 ~~~~~~~~~g~dg~W~Dmn 472 (946)
.++.+.+ .|||||=+|..
T Consensus 327 ~lr~Wv~-~gVDGfRfDla 344 (1221)
T PRK14510 327 VLRSWAK-RGVDGFRLDLA 344 (1221)
T ss_pred HHHHHHH-hCCCEEEEech
Confidence 9999888 89999999953
No 51
>PRK09505 malS alpha-amylase; Reviewed
Probab=88.10 E-value=3.4 Score=51.44 Aligned_cols=29 Identities=10% Similarity=0.180 Sum_probs=24.4
Q ss_pred CHHHHHHHHHHHHHhhccCCccEEEEeCC
Q 002256 444 NPKTVSWWGDEIRRFHELVPVDGLWIDMN 472 (946)
Q Consensus 444 np~a~~ww~~~~~~~~~~~g~dg~W~Dmn 472 (946)
||+++++..+.++.+.+..|||||=+|.-
T Consensus 435 n~~Vr~yL~~~ik~Wv~e~GIDGfRlDaa 463 (683)
T PRK09505 435 GYTPRDYLTHWLSQWVRDYGIDGFRVDTA 463 (683)
T ss_pred CHHHHHHHHHHHHHHHHhcCCCEEEEech
Confidence 56888888888888887789999999964
No 52
>PLN00196 alpha-amylase; Provisional
Probab=88.01 E-value=9.9 Score=44.92 Aligned_cols=136 Identities=17% Similarity=0.229 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHHHcCCCceEEEecCCCC----CCc---eeeeeCCCCCCCh-hHHHHHHHHHHcCCEEEEEeCC-CCccC
Q 002256 335 LSVVEDVVENYKKAKIPLDVIWNDDDHM----DGH---KDFTLNPTNYPRP-KLLAFLEKIHKIGMKYIVIIDP-GIGVN 405 (946)
Q Consensus 335 ~~~v~~vv~~~~~~~IPlD~iw~Didym----~~~---~~Ft~d~~~FP~p-~l~~~v~~Lh~~g~k~v~iidP-~I~~~ 405 (946)
...+.+-+..+++.| +++||+-.-+- .+| ..|.+|+.+|-.. ++++||+++|++|+|+|+=+=+ |...+
T Consensus 43 ~~~i~~kldyL~~LG--vtaIWL~P~~~s~s~hGY~~~D~y~ld~~~fGt~~elk~Lv~~aH~~GIkVilDvV~NH~~~~ 120 (428)
T PLN00196 43 YNFLMGKVDDIAAAG--ITHVWLPPPSHSVSEQGYMPGRLYDLDASKYGNEAQLKSLIEAFHGKGVQVIADIVINHRTAE 120 (428)
T ss_pred HHHHHHHHHHHHHcC--CCEEEeCCCCCCCCCCCCCccccCCCCcccCCCHHHHHHHHHHHHHCCCEEEEEECccCcccc
Confidence 445666666666554 57798763221 122 2356676677653 6899999999999999874433 33321
Q ss_pred C-----CcHHhHhccc---CcEE---EeeCCcceE---E--EecCCccccc--CCCCHHHHHHHHHHHHHhhccCCccEE
Q 002256 406 S-----SYGVYQRGIA---NDVF---IKYEGEPYL---A--QVWPGAVNFP--DFLNPKTVSWWGDEIRRFHELVPVDGL 467 (946)
Q Consensus 406 ~-----~y~~y~~g~~---~~~f---ik~~g~~~~---g--~~WpG~~~~p--Df~np~a~~ww~~~~~~~~~~~g~dg~ 467 (946)
. .|..+..+.. .+++ +..+.+.+. + ..|.+....| |..||+++++-.+.++-+.+.+|+|||
T Consensus 121 ~~~~~~~y~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~lpDLn~~np~V~~~l~~~~~wl~~~~GiDG~ 200 (428)
T PLN00196 121 HKDGRGIYCLFEGGTPDSRLDWGPHMICRDDTQYSDGTGNLDTGADFAAAPDIDHLNKRVQRELIGWLLWLKSDIGFDAW 200 (428)
T ss_pred cccCCCceEECCCCCCCCccccccccCCCCcccccCCCCceeCCCCCCCCCccCCCCHHHHHHHHHHHHHHhhCCCCCEE
Confidence 1 0111111111 1111 000000110 1 1233333454 556899999988877655567899999
Q ss_pred EEeCC
Q 002256 468 WIDMN 472 (946)
Q Consensus 468 W~Dmn 472 (946)
=+|.-
T Consensus 201 RlD~a 205 (428)
T PLN00196 201 RLDFA 205 (428)
T ss_pred Eeehh
Confidence 99964
No 53
>PRK12313 glycogen branching enzyme; Provisional
Probab=87.78 E-value=5 Score=49.81 Aligned_cols=93 Identities=15% Similarity=0.236 Sum_probs=58.1
Q ss_pred CCCCh-hHHHHHHHHHHcCCEEEEEeCC-CCccCCCc-HHhHhcccCcEEEeeCC-cceEEEecCCcccccCCCCHHHHH
Q 002256 374 NYPRP-KLLAFLEKIHKIGMKYIVIIDP-GIGVNSSY-GVYQRGIANDVFIKYEG-EPYLAQVWPGAVNFPDFLNPKTVS 449 (946)
Q Consensus 374 ~FP~p-~l~~~v~~Lh~~g~k~v~iidP-~I~~~~~y-~~y~~g~~~~~fik~~g-~~~~g~~WpG~~~~pDf~np~a~~ 449 (946)
+|-.+ ++++||+++|++|+++|+=+-| |.+.+... ..|+ + ..+|-..++ ..+ ...|.. .-.|+.||++++
T Consensus 215 ~~Gt~~d~k~lv~~~H~~Gi~VilD~V~nH~~~~~~~~~~~~-~--~~~~~~~~~~~~~-~~~w~~--~~~n~~~~~vr~ 288 (633)
T PRK12313 215 RYGTPEDFMYLVDALHQNGIGVILDWVPGHFPKDDDGLAYFD-G--TPLYEYQDPRRAE-NPDWGA--LNFDLGKNEVRS 288 (633)
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCcccccccC-C--CcceeecCCCCCc-CCCCCC--cccCCCCHHHHH
Confidence 34433 5899999999999999986555 44432111 0111 0 001111111 011 113432 346899999999
Q ss_pred HHHHHHHHhhccCCccEEEEeCC
Q 002256 450 WWGDEIRRFHELVPVDGLWIDMN 472 (946)
Q Consensus 450 ww~~~~~~~~~~~g~dg~W~Dmn 472 (946)
+..+.++.+.+..+||||=+|+-
T Consensus 289 ~l~~~~~~W~~~~~iDG~R~D~~ 311 (633)
T PRK12313 289 FLISSALFWLDEYHLDGLRVDAV 311 (633)
T ss_pred HHHHHHHHHHHHhCCcEEEEcCh
Confidence 99999988888899999999964
No 54
>TIGR01370 cysRS possible cysteinyl-tRNA synthetase, Methanococcus type. Assignment of this protein family as cysteinyl-tRNA synthetase is controversial, supported by PubMed:11333988 but challenged by PubMed:14679218. Members of this family from Deinococcus radiodurans (bacterial) and Methanococcus jannaschii (archaeal), species lacking a conventional cysteinyl-tRNA synthetase (Cys--tRNA ligase), have been indicated to be a novel form of that enzyme, perhaps distantly related to class I tRNA ligases. The member from Thermotoga maritima is presumed to be a second isozyme of cysteinyl-tRNA synthetase. A number of homologous but more distantly related proteins are annotated as alpha-1,4 polygalactosaminidases.
Probab=86.91 E-value=2 Score=48.49 Aligned_cols=102 Identities=21% Similarity=0.350 Sum_probs=65.0
Q ss_pred CceEEEecCCCCCCceeeeeCCCCCCChhHHHHHHHHHHcCCEEEEEeCCCCccCCCcHHh-Hhc---ccCcEEEeeCCc
Q 002256 351 PLDVIWNDDDHMDGHKDFTLNPTNYPRPKLLAFLEKIHKIGMKYIVIIDPGIGVNSSYGVY-QRG---IANDVFIKYEGE 426 (946)
Q Consensus 351 PlD~iw~Didym~~~~~Ft~d~~~FP~p~l~~~v~~Lh~~g~k~v~iidP~I~~~~~y~~y-~~g---~~~~~fik~~g~ 426 (946)
+.|.+.+|.++-.. +...|. + +-++.||+.|.+++..+.-|-. ++|..| ++. ...+++ |.
T Consensus 64 ~~d~vVID~~~~g~------~~~~fs-~---~~i~~Lk~~g~~viaYlSvGe~--E~~R~y~~~~~~~~~~~~l----~~ 127 (315)
T TIGR01370 64 PFELVVIDYSKDGT------EDGTYS-P---EEIVRAAAAGRWPIAYLSIGAA--EDYRFYWQKGWKVNAPAWL----GN 127 (315)
T ss_pred CCCEEEEccccccC------cccCCC-H---HHHHHHHhCCcEEEEEEEchhc--cccchhhhhhhhcCCHHHh----CC
Confidence 68888887664311 111343 2 5688999999999988875532 344444 221 111222 22
Q ss_pred ceEEEecCCcccccCCCCHHHHHHHHHHHHHhhccCCccEEEEeCC
Q 002256 427 PYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHELVPVDGLWIDMN 472 (946)
Q Consensus 427 ~~~g~~WpG~~~~pDf~np~a~~ww~~~~~~~~~~~g~dg~W~Dmn 472 (946)
+ -.-|||. .++|+.+|+-++...+.++.+.+ .||||+.+|.-
T Consensus 128 ~--n~~W~g~-~~vd~~~~~W~~il~~rl~~l~~-kGfDGvfLD~l 169 (315)
T TIGR01370 128 E--DPDWPGN-YDVKYWDPEWKAIAFSYLDRVIA-QGFDGVYLDLI 169 (315)
T ss_pred C--CCCCCCc-eeEecccHHHHHHHHHHHHHHHH-cCCCeEeeccc
Confidence 1 1349985 78999999977778777776654 59999999953
No 55
>KOG1065 consensus Maltase glucoamylase and related hydrolases, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism]
Probab=86.48 E-value=0.19 Score=61.89 Aligned_cols=168 Identities=4% Similarity=-0.195 Sum_probs=122.3
Q ss_pred HHHHHHHHHHHhcc-CCCccEEeccccCCCCCceeeeCCCCCCChHHHHHhHHhhhcccccCCceeeccccccCCCCChh
Q 002256 555 SQSIATHKALLGLE-GKRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPAPTEE 633 (946)
Q Consensus 555 ~~~~at~~~l~~~~-~kRpfilsRS~f~Gs~ry~~~WtGDn~s~W~~L~~sI~~~L~~~l~Gip~~G~DIgGF~g~~~~E 633 (946)
+.+...+.+.+.+. .+|.+-++ +.....++.+.+|.+++.+.|-..-.++.- ..+..+.+++...++||.-....++
T Consensus 471 yd~~~lyg~~~aiat~~a~~~v~-~kr~~i~srsTf~g~g~y~~hwlgdn~~~w-~~L~~sI~gml~fnl~Gip~Vg~Di 548 (805)
T KOG1065|consen 471 YDTHNLYGYSEAIATHQALVDVP-GKRSFILSRSTFVGSGRYAGHWLGDNTARW-EDLQTSISGMLEFNLFGIPMVGSDI 548 (805)
T ss_pred hhhhhhHhHHHhhhhhccceecc-ccccccccccceecccccceeeccccccee-hhccccchhhhcccccCCCccchhh
Confidence 44566677776654 45555555 889999999999987776654433333433 6667777788999999988776666
Q ss_pred HHHHHHHhccccceeccCCCCCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccCCCCCcch
Q 002256 634 LCNRWIEVGAFYPFSRDHANYYSPRQELYQWESVAESARNALGMRYKLLPFLYTLNYEAHLSGAPIARPLFFSFPNYVEC 713 (946)
Q Consensus 634 L~~RW~QlgaF~Pf~R~H~~~~~~~qeP~~~~~~~~~~r~ai~lRY~LLPYlYtl~~~a~~~G~Pv~RPL~~efP~D~~~ 713 (946)
++ ++|...|..++|..-.....++.++-.+....|..+..|++ +.+++.......+.++-+++.++||.-..-
T Consensus 549 cg----f~~~~~eELc~RW~q~gaF~Pf~R~hn~~~~~~qe~~~~~s---v~~a~r~~~~~ry~~lP~lytl~~~A~~sG 621 (805)
T KOG1065|consen 549 CG----FLGPPTEELCLRWLQLGAFYPFSRNHNSPGEPRQEPYTWSS---VAEAARNALTLRYTLLPYLYTLFYRAHVSG 621 (805)
T ss_pred hc----CCCCCCHHHHHHHHHhccCCchhhccCCCCCcccChhhHHH---HHHHHHHhhhheeeehhhHHHhhhhhhhcC
Confidence 66 89999998888886555566666664455566777788888 788888888889999999999999887666
Q ss_pred hccCCeeeecCceeeecc
Q 002256 714 YNVSTQFLLGSSLMVSPV 731 (946)
Q Consensus 714 ~~i~~Qfm~G~~LLVaPV 731 (946)
..+..+++++-...-++-
T Consensus 622 ~pV~RPlf~~fP~D~~~~ 639 (805)
T KOG1065|consen 622 EPVARPLFFEFPTDPATL 639 (805)
T ss_pred CcceeeeeeecCCChhhh
Confidence 566677776665544443
No 56
>PLN02960 alpha-amylase
Probab=86.31 E-value=6.1 Score=50.07 Aligned_cols=132 Identities=16% Similarity=0.284 Sum_probs=78.3
Q ss_pred CHHHHH-HHHHHHHHcCCCceEEEecC--CCC----CCc---eeeeeCCCCCCCh-hHHHHHHHHHHcCCEEEEEeCC-C
Q 002256 334 NLSVVE-DVVENYKKAKIPLDVIWNDD--DHM----DGH---KDFTLNPTNYPRP-KLLAFLEKIHKIGMKYIVIIDP-G 401 (946)
Q Consensus 334 ~~~~v~-~vv~~~~~~~IPlD~iw~Di--dym----~~~---~~Ft~d~~~FP~p-~l~~~v~~Lh~~g~k~v~iidP-~ 401 (946)
+-.++. +++..+++.|| .+||+=- ++- -+| ..|..++ +|-.| +++.||+.+|++|+++|+=+-| |
T Consensus 414 tf~~~~e~~LdYLk~LGv--t~IeLmPv~e~~~~~swGY~~~~yfa~~~-~yGtp~dfk~LVd~aH~~GI~VILDvV~NH 490 (897)
T PLN02960 414 SFKEFTQKVLPHVKKAGY--NAIQLIGVQEHKDYSSVGYKVTNFFAVSS-RFGTPDDFKRLVDEAHGLGLLVFLDIVHSY 490 (897)
T ss_pred CHHHHHHHHHHHHHHcCC--CEEEECCcccCCCCCCCCCCcccCCCccc-ccCCHHHHHHHHHHHHHCCCEEEEEecccc
Confidence 555654 56777777765 4466521 110 011 1233332 34333 5899999999999999986554 5
Q ss_pred CccCCC--cHHhHhcccCcEEEeeCCcceEEEecCCcccccCCCCHHHHHHHHHHHHHhhccCCccEEEEeCCC
Q 002256 402 IGVNSS--YGVYQRGIANDVFIKYEGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHELVPVDGLWIDMNE 473 (946)
Q Consensus 402 I~~~~~--y~~y~~g~~~~~fik~~g~~~~g~~WpG~~~~pDf~np~a~~ww~~~~~~~~~~~g~dg~W~DmnE 473 (946)
...+.. ...|+ |. .+.|... +..-....| | +...||.+|+++++..+.++-+.+..+||||=+|.-.
T Consensus 491 ~~~d~~~~L~~FD-G~-~~~Yf~~-~~~g~~~~W-G-~~~fNy~~~eVr~fLlsna~yWl~EyhIDGfR~DAV~ 559 (897)
T PLN02960 491 AAADEMVGLSLFD-GS-NDCYFHS-GKRGHHKRW-G-TRMFKYGDHEVLHFLLSNLNWWVTEYRVDGFQFHSLG 559 (897)
T ss_pred cCCccccchhhcC-CC-ccceeec-CCCCccCCC-C-CcccCCCCHHHHHHHHHHHHHHHHHHCCCceeecccc
Confidence 544321 11222 21 1222221 111112345 3 2457999999999999999988888999999999643
No 57
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=85.86 E-value=17 Score=44.81 Aligned_cols=148 Identities=14% Similarity=0.181 Sum_probs=85.1
Q ss_pred CcccccceeccCCC----CCHHHHHHHHHHHHHcCCCceEEEe-cCCCCCCceeeeeC-------CCCCCCh-hHHHHHH
Q 002256 319 PYWSLGFHQCRWGY----HNLSVVEDVVENYKKAKIPLDVIWN-DDDHMDGHKDFTLN-------PTNYPRP-KLLAFLE 385 (946)
Q Consensus 319 P~WalG~hq~r~gY----~~~~~v~~vv~~~~~~~IPlD~iw~-Didym~~~~~Ft~d-------~~~FP~p-~l~~~v~ 385 (946)
|.=-+-.|.+.|.- ..-+-+.+.+..+++.||-+ |-+ =+-=....++|=+| ..+|-.| +|+.|||
T Consensus 144 ~~vIYElHvGs~~~~~~~~~~e~a~~llpYl~elG~T~--IELMPv~e~p~~~sWGYq~~g~yAp~sryGtPedfk~fVD 221 (628)
T COG0296 144 PIVIYELHVGSFTPDRFLGYFELAIELLPYLKELGITH--IELMPVAEHPGDRSWGYQGTGYYAPTSRYGTPEDFKALVD 221 (628)
T ss_pred CceEEEEEeeeccCCCCcCHHHHHHHHhHHHHHhCCCE--EEEcccccCCCCCCCCCCcceeccccccCCCHHHHHHHHH
Confidence 44445667777743 34456778888999988643 210 01001122333333 3567666 5899999
Q ss_pred HHHHcCCEEEEEeCC-CCccCCCcHHhHhcccCcEEEeeCCcceEEEecCCcccccCCCCHHHHHHHHHHHHHhhccCCc
Q 002256 386 KIHKIGMKYIVIIDP-GIGVNSSYGVYQRGIANDVFIKYEGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHELVPV 464 (946)
Q Consensus 386 ~Lh~~g~k~v~iidP-~I~~~~~y~~y~~g~~~~~fik~~g~~~~g~~WpG~~~~pDf~np~a~~ww~~~~~~~~~~~g~ 464 (946)
..|++|+-+++=+=| |...+..|-..= .+.+......|..|.-.|=.+..-|+-.+++|++..+....+++...|
T Consensus 222 ~aH~~GIgViLD~V~~HF~~d~~~L~~f----dg~~~~e~~~~~~~~~~~Wg~~i~~~gr~EVR~Fll~nal~Wl~~yHi 297 (628)
T COG0296 222 AAHQAGIGVILDWVPNHFPPDGNYLARF----DGTFLYEHEDPRRGEHTDWGTAIFNYGRNEVRNFLLANALYWLEEYHI 297 (628)
T ss_pred HHHHcCCEEEEEecCCcCCCCcchhhhc----CCccccccCCcccccCCCcccchhccCcHHHHHHHHHHHHHHHHHhCC
Confidence 999999988874444 565543221110 011121111122222222123233334999999998888778888999
Q ss_pred cEEEEeCC
Q 002256 465 DGLWIDMN 472 (946)
Q Consensus 465 dg~W~Dmn 472 (946)
||+=+|.-
T Consensus 298 DGlRvDAV 305 (628)
T COG0296 298 DGLRVDAV 305 (628)
T ss_pred cceeeehh
Confidence 99999953
No 58
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=85.63 E-value=1.4 Score=48.20 Aligned_cols=130 Identities=18% Similarity=0.342 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHcCCCceEEEecC----C-CCCCc--eee-eeCCCCCCC-hhHHHHHHHHHHcCCEEEEEeCC-CCccCC
Q 002256 337 VVEDVVENYKKAKIPLDVIWNDD----D-HMDGH--KDF-TLNPTNYPR-PKLLAFLEKIHKIGMKYIVIIDP-GIGVNS 406 (946)
Q Consensus 337 ~v~~vv~~~~~~~IPlD~iw~Di----d-ym~~~--~~F-t~d~~~FP~-p~l~~~v~~Lh~~g~k~v~iidP-~I~~~~ 406 (946)
.+.+-++.+++ +-+++||+-. . .-.+| .|| ..|+ +|-. .++++||+++|++|+|+|+=+-+ |.+.+
T Consensus 5 gi~~kLdyl~~--lGv~~I~l~Pi~~~~~~~~gY~~~d~~~vd~-~~Gt~~d~~~Lv~~~h~~gi~VilD~V~NH~~~~- 80 (316)
T PF00128_consen 5 GIIDKLDYLKD--LGVNAIWLSPIFESPNGYHGYDPSDYYAVDP-RFGTMEDFKELVDAAHKRGIKVILDVVPNHTSDD- 80 (316)
T ss_dssp HHHHTHHHHHH--HTESEEEESS-EESSSSTTTTSESEEEEEST-TTBHHHHHHHHHHHHHHTTCEEEEEEETSEEETT-
T ss_pred HHHHhhHHHHH--cCCCceecccccccccccccccceeeecccc-ccchhhhhhhhhhccccccceEEEeeeccccccc-
Confidence 34444455555 5567788642 1 11112 343 5676 4443 46899999999999999987766 44433
Q ss_pred CcHHhHhcc------cCcEEEee--------------CCcceEEEecC----Cc--ccccCCCCHHHHHHHHHHHHHhhc
Q 002256 407 SYGVYQRGI------ANDVFIKY--------------EGEPYLAQVWP----GA--VNFPDFLNPKTVSWWGDEIRRFHE 460 (946)
Q Consensus 407 ~y~~y~~g~------~~~~fik~--------------~g~~~~g~~Wp----G~--~~~pDf~np~a~~ww~~~~~~~~~ 460 (946)
...+++.. ..++++-. ++..+....|. .. ..-.|+.||+++++..+.++.+.+
T Consensus 81 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~n~~v~~~i~~~~~~w~~ 159 (316)
T PF00128_consen 81 -HPWFQDSLNYFDNPYSDYYYWRDGEGSPPGNWYSYFGGSNWEYDDWGDEYQFWSDLPDLNYENPEVREYIIDVLKFWIE 159 (316)
T ss_dssp -SHHHHHHHTHTTSTTGTTBEEESBTSTTSSTBBCSTTTSSEESCHHTHCHSSSTTSEEBETTSHHHHHHHHHHHHHHHH
T ss_pred -cccccccccccccccccceeecccccccccccccccccccccccccccccccccccchhhhhhhhhhhhhcccccchhh
Confidence 22222111 23444411 11222222222 11 223578899999999997777765
Q ss_pred cCCccEEEEeCC
Q 002256 461 LVPVDGLWIDMN 472 (946)
Q Consensus 461 ~~g~dg~W~Dmn 472 (946)
.+||||=+|+-
T Consensus 160 -~giDGfR~D~~ 170 (316)
T PF00128_consen 160 -EGIDGFRLDAA 170 (316)
T ss_dssp -TTESEEEETTG
T ss_pred -ceEeEEEEccc
Confidence 57999999974
No 59
>PF13200 DUF4015: Putative glycosyl hydrolase domain
Probab=84.61 E-value=11 Score=42.57 Aligned_cols=127 Identities=14% Similarity=0.176 Sum_probs=80.4
Q ss_pred eeccCCCCCHHHHHHHHHHHHHcCCCceEEEecCCCCCCceeeeeC-----------CCCCCChhHHHHHHHHHHcCCEE
Q 002256 326 HQCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDHMDGHKDFTLN-----------PTNYPRPKLLAFLEKIHKIGMKY 394 (946)
Q Consensus 326 hq~r~gY~~~~~v~~vv~~~~~~~IPlD~iw~Didym~~~~~Ft~d-----------~~~FP~p~l~~~v~~Lh~~g~k~ 394 (946)
..+-+.-.+.+.+.++++..++.+|-. +.+|+- ++.+.-+++ ...+ -.++++++++||++|+.+
T Consensus 3 Ylt~~~a~~~~~~~~~~~~i~~t~lNa--vVIDvK--dd~G~i~y~s~~~~~~~~ga~~~~-i~D~~~l~~~l~e~gIY~ 77 (316)
T PF13200_consen 3 YLTAYSAGSPERLDKLLDLIKRTELNA--VVIDVK--DDDGNITYDSQVPLAREIGAVKPY-IKDLKALVKKLKEHGIYP 77 (316)
T ss_pred EechhhcCCHHHHHHHHHHHHhcCCce--EEEEEe--cCCceEEecCCCchhhhccccccc-ccCHHHHHHHHHHCCCEE
Confidence 344455557777888888888887654 555643 122222221 1122 124679999999999977
Q ss_pred EEEe----CCCCccCCCcHHhHhcccCcEEEe-eCCcceEEEecCCcccccCCCCHHHHHHHHHHHHHhhccCCccEEEE
Q 002256 395 IVII----DPGIGVNSSYGVYQRGIANDVFIK-YEGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHELVPVDGLWI 469 (946)
Q Consensus 395 v~ii----dP~I~~~~~y~~y~~g~~~~~fik-~~g~~~~g~~WpG~~~~pDf~np~a~~ww~~~~~~~~~~~g~dg~W~ 469 (946)
|..| ||.+... ..++-++ .+|+++.. .. ...|+|-++++++++-.+..++.. ++|||.+=+
T Consensus 78 IARIv~FkD~~la~~----------~pe~av~~~~G~~w~d--~~-~~~WvnP~~~evw~Y~i~IA~Eaa-~~GFdEIqf 143 (316)
T PF13200_consen 78 IARIVVFKDPVLAEA----------HPEWAVKTKDGSVWRD--NE-GEAWVNPYSKEVWDYNIDIAKEAA-KLGFDEIQF 143 (316)
T ss_pred EEEEEEecChHHhhh----------ChhhEEECCCCCcccC--CC-CCccCCCCCHHHHHHHHHHHHHHH-HcCCCEEEe
Confidence 7655 5544321 3344455 45654331 12 256999999999999888777765 469999988
Q ss_pred eC
Q 002256 470 DM 471 (946)
Q Consensus 470 Dm 471 (946)
|-
T Consensus 144 DY 145 (316)
T PF13200_consen 144 DY 145 (316)
T ss_pred ee
Confidence 84
No 60
>PLN02361 alpha-amylase
Probab=84.15 E-value=12 Score=43.93 Aligned_cols=132 Identities=17% Similarity=0.155 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHHcCCCceEEEecCCCC----CCc--e-eeeeCCCCCCC-hhHHHHHHHHHHcCCEEEEEeCC-CCcc-C
Q 002256 336 SVVEDVVENYKKAKIPLDVIWNDDDHM----DGH--K-DFTLNPTNYPR-PKLLAFLEKIHKIGMKYIVIIDP-GIGV-N 405 (946)
Q Consensus 336 ~~v~~vv~~~~~~~IPlD~iw~Didym----~~~--~-~Ft~d~~~FP~-p~l~~~v~~Lh~~g~k~v~iidP-~I~~-~ 405 (946)
..+.+-++.+++. -+++||+-.-+- .+| . .|..| .+|-. .+|++||+.+|++|+|+|+=+=+ |... .
T Consensus 29 ~~i~~kl~~l~~l--G~t~iwl~P~~~~~~~~GY~~~d~y~~~-~~~Gt~~el~~li~~~h~~gi~vi~D~V~NH~~g~~ 105 (401)
T PLN02361 29 RNLEGKVPDLAKS--GFTSAWLPPPSQSLAPEGYLPQNLYSLN-SAYGSEHLLKSLLRKMKQYNVRAMADIVINHRVGTT 105 (401)
T ss_pred HHHHHHHHHHHHc--CCCEEEeCCCCcCCCCCCCCcccccccC-cccCCHHHHHHHHHHHHHcCCEEEEEEccccccCCC
Confidence 3455555555554 457788754221 122 1 23444 35554 36899999999999999874322 2211 0
Q ss_pred ----CCcHHhHhcccCcE---EEe-eC-Cc--ceEEEecCCcccccCCCCHHHHHHHHHHHHHhhccCCccEEEEeCC
Q 002256 406 ----SSYGVYQRGIANDV---FIK-YE-GE--PYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHELVPVDGLWIDMN 472 (946)
Q Consensus 406 ----~~y~~y~~g~~~~~---fik-~~-g~--~~~g~~WpG~~~~pDf~np~a~~ww~~~~~~~~~~~g~dg~W~Dmn 472 (946)
..|..|. +...++ -+. .+ |. .-.+..+++ ..=+|..||++++...+-++-+.+.+|||||=+|+-
T Consensus 106 ~~~~~~y~~~~-g~~~~wd~~~~~~~~~g~~~~~~~~~~~~-lpDLd~~np~Vr~~l~~~~~wl~~~~GiDGfRlDav 181 (401)
T PLN02361 106 QGHGGMYNRYD-GIPLPWDEHAVTSCTGGLGNRSTGDNFNG-VPNIDHTQHFVRKDIIGWLIWLRNDVGFQDFRFDFA 181 (401)
T ss_pred CCCCCCcccCC-CCcCCCCccccccccCCCCCccCCCCCcc-CCccCCCCHHHHHHHHHHHHHHHhcCCCCEEEEecc
Confidence 1122221 110000 000 00 10 001111121 122456789999988887775666799999999964
No 61
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=83.84 E-value=5.9 Score=48.24 Aligned_cols=82 Identities=23% Similarity=0.324 Sum_probs=55.6
Q ss_pred hHHHHHHHHHHcCCEEEEEeCC-CCccCCCcHHhHhcccCcEEEeeCCcceEEEecCCcccccCCCCH---HHHHHHHHH
Q 002256 379 KLLAFLEKIHKIGMKYIVIIDP-GIGVNSSYGVYQRGIANDVFIKYEGEPYLAQVWPGAVNFPDFLNP---KTVSWWGDE 454 (946)
Q Consensus 379 ~l~~~v~~Lh~~g~k~v~iidP-~I~~~~~y~~y~~g~~~~~fik~~g~~~~g~~WpG~~~~pDf~np---~a~~ww~~~ 454 (946)
++++||+.+|++|+++|+=+-+ |...+..|. .-.. .+|-. +. ...| |. -+||.|| .++++..+.
T Consensus 161 e~k~lV~~aH~~Gi~VilD~V~NH~~~~~~~~---~~~~-~y~~~-~~----~~~w-g~--~~n~~~~~~~~vr~~i~~~ 228 (542)
T TIGR02402 161 DLKALVDAAHGLGLGVILDVVYNHFGPEGNYL---PRYA-PYFTD-RY----STPW-GA--AINFDGPGSDEVRRYILDN 228 (542)
T ss_pred HHHHHHHHHHHCCCEEEEEEccCCCCCccccc---cccC-ccccC-CC----CCCC-CC--ccccCCCcHHHHHHHHHHH
Confidence 6899999999999999886554 444332221 0001 13321 11 1233 22 3799999 999999999
Q ss_pred HHHhhccCCccEEEEeCC
Q 002256 455 IRRFHELVPVDGLWIDMN 472 (946)
Q Consensus 455 ~~~~~~~~g~dg~W~Dmn 472 (946)
++.+.+..++|||=+|.-
T Consensus 229 ~~~W~~e~~iDGfR~D~~ 246 (542)
T TIGR02402 229 ALYWLREYHFDGLRLDAV 246 (542)
T ss_pred HHHHHHHhCCcEEEEeCH
Confidence 998888899999999953
No 62
>PF01120 Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR000933 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Family 29 (GH29 from CAZY) encompasses alpha-L-fucosidases (3.2.1.51 from EC) [], which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Alpha-L-fucosidase is responsible for hydrolysing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Fucosylated glycoconjugates are involved in numerous biological events, making alpha-l-fucosidases, the enzymes responsible for their processing, critically important. Deficiency in alpha-l-fucosidase activity is associated with fucosidosis, a lysosomal storage disorder characterised by rapid neurodegeneration, resulting in severe mental and motor deterioration []. The enzyme is a hexamer and displays a two-domain fold, composed of a catalytic (beta/alpha)(8)-like domain and a C-terminal beta-sandwich domain []. Drosophila melanogaster spermatozoa contains an alpha-l-fucosidase that might be involved in fertilisation by interacting with alpha-l-fucose residues on the micropyle of the eggshell []. In human sperm, membrane-associated alpha-l-fucosidase is stable for extended periods of time, which is made possible by membrane domains and compartmentalisation. These help preserve protein integrity []. ; GO: 0004560 alpha-L-fucosidase activity, 0005975 carbohydrate metabolic process; PDB: 3EYP_B 2ZX6_A 2ZWY_B 2ZX8_B 2WSP_A 2ZXA_A 2ZWZ_B 1ODU_B 1HL9_A 2ZX5_B ....
Probab=83.57 E-value=2.4 Score=48.60 Aligned_cols=103 Identities=22% Similarity=0.389 Sum_probs=49.9
Q ss_pred eeCCCCCCChhHHHHHHHHHHcCCEEEEEeCC---CCccC----CCcHHhHhcccCcEE---Ee---eCCcc---eEE-E
Q 002256 369 TLNPTNYPRPKLLAFLEKIHKIGMKYIVIIDP---GIGVN----SSYGVYQRGIANDVF---IK---YEGEP---YLA-Q 431 (946)
Q Consensus 369 t~d~~~FP~p~l~~~v~~Lh~~g~k~v~iidP---~I~~~----~~y~~y~~g~~~~~f---ik---~~g~~---~~g-~ 431 (946)
+|++++|- |+ +.++..++.|+|+++++-= |+..= ..|..-+.+.+.|+. ++ ..|-. |.. .
T Consensus 85 ~F~p~~fD-~d--qW~~~ak~aGakY~VlTakHHDGF~LW~S~~t~~~v~~~~~krDiv~El~~A~rk~Glk~G~Y~S~~ 161 (346)
T PF01120_consen 85 QFNPTKFD-AD--QWAKLAKDAGAKYVVLTAKHHDGFCLWPSKYTDYNVVNSGPKRDIVGELADACRKYGLKFGLYYSPW 161 (346)
T ss_dssp G---TT---HH--HHHHHHHHTT-SEEEEEEE-TT--BSS--TT-SSBGGGGGGTS-HHHHHHHHHHHTT-EEEEEEESS
T ss_pred hCCcccCC-HH--HHHHHHHHcCCCEEEeehhhcCccccCCCCCCcccccCCCCCCCHHHHHHHHHHHcCCeEEEEecch
Confidence 57788883 55 9999999999999998732 33211 112222222223321 00 11211 110 0
Q ss_pred ecCCcccccCCCCH------------H-HHHHHHHHHHHhhccCCccEEEEeCCCC
Q 002256 432 VWPGAVNFPDFLNP------------K-TVSWWGDEIRRFHELVPVDGLWIDMNEA 474 (946)
Q Consensus 432 ~WpG~~~~pDf~np------------~-a~~ww~~~~~~~~~~~g~dg~W~DmnEp 474 (946)
-|--.....+...+ + ..++|..+++++...+.+|.+|+|+.-+
T Consensus 162 dw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~EL~~~Y~~d~lWfDg~~~ 217 (346)
T PF01120_consen 162 DWHHPDYPPDEEGDENGPADGPGNWQRYYNEYWLAQLRELLTRYKPDILWFDGGWP 217 (346)
T ss_dssp SCCCTTTTSSCHCHHCC--HCCHHHHHHHHHHHHHHHHHHHHCSTESEEEEESTTS
T ss_pred HhcCcccCCCccCCcccccccchhhHhHhhhhhHHHHHHHHhCCCcceEEecCCCC
Confidence 12111111111111 1 2348889999999888999999998754
No 63
>PLN02447 1,4-alpha-glucan-branching enzyme
Probab=83.44 E-value=6.6 Score=49.32 Aligned_cols=132 Identities=15% Similarity=0.252 Sum_probs=78.3
Q ss_pred CHHHH-HHHHHHHHHcCCCceEEEecC----CCCCCc-----eeeeeCCCCCCCh-hHHHHHHHHHHcCCEEEEEeCC-C
Q 002256 334 NLSVV-EDVVENYKKAKIPLDVIWNDD----DHMDGH-----KDFTLNPTNYPRP-KLLAFLEKIHKIGMKYIVIIDP-G 401 (946)
Q Consensus 334 ~~~~v-~~vv~~~~~~~IPlD~iw~Di----dym~~~-----~~Ft~d~~~FP~p-~l~~~v~~Lh~~g~k~v~iidP-~ 401 (946)
+-.++ .+++..+++.|+ ++||+=. .+...+ ..|..+ .+|..| ++++||+.+|++|+++++=+-| |
T Consensus 248 ty~~~~~~~L~ylk~LG~--t~I~LmPi~e~~~~~~wGY~~~~~fa~~-~~~Gtp~dlk~LVd~aH~~GI~VilDvV~nH 324 (758)
T PLN02447 248 SYREFADDVLPRIKALGY--NAVQLMAIQEHAYYGSFGYHVTNFFAVS-SRSGTPEDLKYLIDKAHSLGLRVLMDVVHSH 324 (758)
T ss_pred CHHHHHHHHHHHHHHcCC--CEEEECCccccCCCCCCCcCcccCcccc-cccCCHHHHHHHHHHHHHCCCEEEEEecccc
Confidence 34443 456777776664 4565421 111111 223343 355554 5899999999999999986555 4
Q ss_pred CccCC--CcHHhHhcccCcEEEeeCCcceEEEecCCcccccCCCCHHHHHHHHHHHHHhhccCCccEEEEeCCC
Q 002256 402 IGVNS--SYGVYQRGIANDVFIKYEGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHELVPVDGLWIDMNE 473 (946)
Q Consensus 402 I~~~~--~y~~y~~g~~~~~fik~~g~~~~g~~WpG~~~~pDf~np~a~~ww~~~~~~~~~~~g~dg~W~DmnE 473 (946)
+..+. +...|+ +....+|-. +..-+ ...| | +...|+.+|+++++..+.++.+.+..+||||=+|.-.
T Consensus 325 ~~~~~~~gl~~fD-g~~~~Yf~~-~~~g~-~~~w-~-~~~~N~~~~eVr~fLl~~~~~Wl~ey~IDGfRfDaV~ 393 (758)
T PLN02447 325 ASKNTLDGLNGFD-GTDGSYFHS-GPRGY-HWLW-D-SRLFNYGNWEVLRFLLSNLRWWLEEYKFDGFRFDGVT 393 (758)
T ss_pred ccccccccccccC-CCCcccccc-CCCCC-cCcC-C-CceecCCCHHHHHHHHHHHHHHHHHhCcccccccchh
Confidence 44321 111222 222233322 11100 1234 2 3457999999999999999999888999999999654
No 64
>TIGR02102 pullulan_Gpos pullulanase, extracellular, Gram-positive. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. In contrast, a glycogen debranching enzyme such GlgX, homologous to this family, can release glucose at alpha,1-6 linkages from glycogen first subjected to limit degradation by phosphorylase. Characterized members of this family include a surface-located pullulanase from Streptococcus pneumoniae (PubMed:11083842) and an extracellular bifunctional amylase/pullulanase with C-terminal pullulanase activity (PubMed:8798645).
Probab=83.36 E-value=4.2 Score=53.19 Aligned_cols=86 Identities=19% Similarity=0.254 Sum_probs=60.5
Q ss_pred hHHHHHHHHHHcCCEEEEEeCC-CCccCCCcHHhHhcccCcEEEe--eCCcceEEEecCCcccccCCCCHHHHHHHHHHH
Q 002256 379 KLLAFLEKIHKIGMKYIVIIDP-GIGVNSSYGVYQRGIANDVFIK--YEGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEI 455 (946)
Q Consensus 379 ~l~~~v~~Lh~~g~k~v~iidP-~I~~~~~y~~y~~g~~~~~fik--~~g~~~~g~~WpG~~~~pDf~np~a~~ww~~~~ 455 (946)
+|++||+.||++|+++|+=+=+ |.... ..|+ +...++|.. .+|.+.. .|.|. -.+..||.++++..+.+
T Consensus 556 EfK~LV~alH~~GI~VILDVVyNHt~~~---~~f~-~~~p~Yy~~~~~~G~~~~--~~~g~--~l~~e~~~vrk~iiDsl 627 (1111)
T TIGR02102 556 EFKNLINEIHKRGMGVILDVVYNHTAKV---YIFE-DLEPNYYHFMDADGTPRT--SFGGG--RLGTTHEMSRRILVDSI 627 (1111)
T ss_pred HHHHHHHHHHHCCCEEEEeccccccccc---cccc-ccCCCceEeeCCCCCccc--ccCCC--CCCcCCHHHHHHHHHHH
Confidence 6999999999999999885433 44322 2343 234455543 3455432 23332 36778999999999999
Q ss_pred HHhhccCCccEEEEeCC
Q 002256 456 RRFHELVPVDGLWIDMN 472 (946)
Q Consensus 456 ~~~~~~~g~dg~W~Dmn 472 (946)
+.+.+.++||||=+|+-
T Consensus 628 ~yWv~ey~VDGFRfDl~ 644 (1111)
T TIGR02102 628 KYLVDEFKVDGFRFDMM 644 (1111)
T ss_pred HHHHHhcCCcEEEEecc
Confidence 99988899999999954
No 65
>KOG0471 consensus Alpha-amylase [Carbohydrate transport and metabolism]
Probab=83.27 E-value=4.6 Score=49.18 Aligned_cols=125 Identities=18% Similarity=0.238 Sum_probs=74.3
Q ss_pred cCCCceEEEecCCCC-------CCceeeeeCCCCCCCh-hHHHHHHHHHHcCCEEEEEeCCCCccC-----CCcHHhHhc
Q 002256 348 AKIPLDVIWNDDDHM-------DGHKDFTLNPTNYPRP-KLLAFLEKIHKIGMKYIVIIDPGIGVN-----SSYGVYQRG 414 (946)
Q Consensus 348 ~~IPlD~iw~Didym-------~~~~~Ft~d~~~FP~p-~l~~~v~~Lh~~g~k~v~iidP~I~~~-----~~y~~y~~g 414 (946)
+++.++++|+---+- ..-.||+.=..+|..- ++.++++++|+.|+++|+-+=|--..+ ..-...+.+
T Consensus 50 ~~lG~taiWisP~~~s~~~~~GY~~~d~~~l~p~fGt~edf~~Li~~~h~~gi~ii~D~viNh~~~~~~wf~~~~~~~~~ 129 (545)
T KOG0471|consen 50 KELGFTAIWLSPFTKSSKPDFGYDASDLEQLRPRFGTEEDFKELILAMHKLGIKIIADLVINHRSDEVEWFKASPTSKTG 129 (545)
T ss_pred HhcCCceEEeCCCcCCCHHHhccCccchhhhcccccHHHHHHHHHHHHhhcceEEEEeeccccCCccccccccCcccccc
Confidence 458899999864332 2223444333566643 578999999999999998765522211 000000111
Q ss_pred ccCcEEEeeCCc---------------ceEEEecCC----------c----ccccCCCCHHHHHHHHHHHHHhhccCCcc
Q 002256 415 IANDVFIKYEGE---------------PYLAQVWPG----------A----VNFPDFLNPKTVSWWGDEIRRFHELVPVD 465 (946)
Q Consensus 415 ~~~~~fik~~g~---------------~~~g~~WpG----------~----~~~pDf~np~a~~ww~~~~~~~~~~~g~d 465 (946)
-.+++.-.+|. .+.+..||. . ..-+|+.||++++-+.+.++.+....|||
T Consensus 130 -y~d~~~~~~~~~~~~g~~~~p~nw~~~~~~s~~~~~e~~~~~~l~~~~~~~pDln~~n~~V~~~~~~~l~~~~~~~gvd 208 (545)
T KOG0471|consen 130 -YEDWYPWHDGSSLDVGKRIPPLNWLSVFGGSAWPFDEGRQKYYLGQFAVLQPDLNYENPDVRKAIKEWLRDFWLEKGVD 208 (545)
T ss_pred -ceeeeeccCcccccccCCCCccchHhhhccccCcccccccceeccchhhcCCCCCCCCHHHHHHHHHHHHHHHhhcCCC
Confidence 11222221221 122344542 1 12368899999999999999776678999
Q ss_pred EEEEeCCC
Q 002256 466 GLWIDMNE 473 (946)
Q Consensus 466 g~W~DmnE 473 (946)
||=+|+-.
T Consensus 209 GfRiD~v~ 216 (545)
T KOG0471|consen 209 GFRIDAVK 216 (545)
T ss_pred eEEEEccc
Confidence 99999864
No 66
>PLN03244 alpha-amylase; Provisional
Probab=82.74 E-value=3.4 Score=51.46 Aligned_cols=95 Identities=14% Similarity=0.287 Sum_probs=61.6
Q ss_pred CCCCh-hHHHHHHHHHHcCCEEEEEeCC-CCccCCCcHH-hHhcccCcEEEeeCCcceEEEecCCcccccCCCCHHHHHH
Q 002256 374 NYPRP-KLLAFLEKIHKIGMKYIVIIDP-GIGVNSSYGV-YQRGIANDVFIKYEGEPYLAQVWPGAVNFPDFLNPKTVSW 450 (946)
Q Consensus 374 ~FP~p-~l~~~v~~Lh~~g~k~v~iidP-~I~~~~~y~~-y~~g~~~~~fik~~g~~~~g~~WpG~~~~pDf~np~a~~w 450 (946)
+|-.| +|+.||+++|++|+++++=+-| |...+....+ .-.| ..+.|...+..- .-..| |. ...|+.+|+++++
T Consensus 436 RYGTPeDLK~LVD~aH~~GI~VILDvV~NH~~~d~~~GL~~fDG-t~~~Yf~~~~~g-~~~~W-Gs-~~fnyg~~EVr~F 511 (872)
T PLN03244 436 RYGTPDDFKRLVDEAHGLGLLVFLDIVHSYAAADEMVGLSLFDG-SNDCYFHTGKRG-HHKHW-GT-RMFKYGDLDVLHF 511 (872)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEecCccCCCccccchhhcCC-CccceeccCCCC-ccCCC-CC-ceecCCCHHHHHH
Confidence 44444 5899999999999999986555 4543321111 1112 122233311110 11346 43 4569999999999
Q ss_pred HHHHHHHhhccCCccEEEEeCC
Q 002256 451 WGDEIRRFHELVPVDGLWIDMN 472 (946)
Q Consensus 451 w~~~~~~~~~~~g~dg~W~Dmn 472 (946)
..+.++-+.+..+||||=+|.-
T Consensus 512 LLsna~yWleEyhIDGFRfDaV 533 (872)
T PLN03244 512 LISNLNWWITEYQIDGFQFHSL 533 (872)
T ss_pred HHHHHHHHHHHhCcCcceeecc
Confidence 9999999998999999999953
No 67
>PRK05402 glycogen branching enzyme; Provisional
Probab=81.43 E-value=13 Score=47.09 Aligned_cols=131 Identities=14% Similarity=0.131 Sum_probs=73.3
Q ss_pred CHHHHHHH-HHHHHHcCCCceEEEecCC--CC----CCc---eeeeeCCCCCCCh-hHHHHHHHHHHcCCEEEEEeCC-C
Q 002256 334 NLSVVEDV-VENYKKAKIPLDVIWNDDD--HM----DGH---KDFTLNPTNYPRP-KLLAFLEKIHKIGMKYIVIIDP-G 401 (946)
Q Consensus 334 ~~~~v~~v-v~~~~~~~IPlD~iw~Did--ym----~~~---~~Ft~d~~~FP~p-~l~~~v~~Lh~~g~k~v~iidP-~ 401 (946)
+..++.+- +..+++.| +++||+=.= +- -+| ..|..++ +|-.+ ++++||+++|++|+++|+=+-| |
T Consensus 263 ~~~~i~~~l~~ylk~LG--v~~i~L~Pi~e~~~~~~~GY~~~~y~ai~~-~~Gt~~dfk~lV~~~H~~Gi~VilD~V~NH 339 (726)
T PRK05402 263 SYRELADQLIPYVKEMG--FTHVELLPIAEHPFDGSWGYQPTGYYAPTS-RFGTPDDFRYFVDACHQAGIGVILDWVPAH 339 (726)
T ss_pred CHHHHHHHHHHHHHHcC--CCEEEECCcccCCCCCCCCCCcccCCCcCc-ccCCHHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 44454443 46666655 456775321 11 011 2234443 34433 6899999999999999886555 4
Q ss_pred CccCCC-cHHhHhcccCcEEEeeCCcceEEEecCCcccccCCCCHHHHHHHHHHHHHhhccCCccEEEEeCC
Q 002256 402 IGVNSS-YGVYQRGIANDVFIKYEGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHELVPVDGLWIDMN 472 (946)
Q Consensus 402 I~~~~~-y~~y~~g~~~~~fik~~g~~~~g~~WpG~~~~pDf~np~a~~ww~~~~~~~~~~~g~dg~W~Dmn 472 (946)
...+.. ...|+ +. .-++-+..... ....|.+ .-.|+.||+++++..+.++.+.+..+||||=+|+-
T Consensus 340 ~~~~~~~~~~~~-~~-~~y~~~~~~~~-~~~~w~~--~~~n~~~~~v~~~l~~~~~~W~~e~~iDG~R~D~v 406 (726)
T PRK05402 340 FPKDAHGLARFD-GT-ALYEHADPREG-EHPDWGT--LIFNYGRNEVRNFLVANALYWLEEFHIDGLRVDAV 406 (726)
T ss_pred CCCCccchhccC-CC-cceeccCCcCC-ccCCCCC--ccccCCCHHHHHHHHHHHHHHHHHhCCcEEEECCH
Confidence 432211 00110 00 00111100000 0112322 24699999999999999988888899999999963
No 68
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=81.22 E-value=12 Score=44.73 Aligned_cols=33 Identities=21% Similarity=0.235 Sum_probs=27.2
Q ss_pred cCCCCHHHHHHHHHHHHHhhccCCccEEEEeCC
Q 002256 440 PDFLNPKTVSWWGDEIRRFHELVPVDGLWIDMN 472 (946)
Q Consensus 440 pDf~np~a~~ww~~~~~~~~~~~g~dg~W~Dmn 472 (946)
+|..||++++...+.++.+.+..|||||=+|.-
T Consensus 203 Ln~~np~V~~~l~~~~~~w~~~~giDGfRlDav 235 (479)
T PRK09441 203 IDFRHPEVREELKYWAKWYMETTGFDGFRLDAV 235 (479)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCCEEEEhhh
Confidence 344789999998888887777789999999964
No 69
>PRK14706 glycogen branching enzyme; Provisional
Probab=80.84 E-value=11 Score=46.79 Aligned_cols=95 Identities=16% Similarity=0.145 Sum_probs=57.6
Q ss_pred CCCCh-hHHHHHHHHHHcCCEEEEEeCC-CCccCCCcHHhHhcccCcEEEeeCCcceEEEecCCcccccCCCCHHHHHHH
Q 002256 374 NYPRP-KLLAFLEKIHKIGMKYIVIIDP-GIGVNSSYGVYQRGIANDVFIKYEGEPYLAQVWPGAVNFPDFLNPKTVSWW 451 (946)
Q Consensus 374 ~FP~p-~l~~~v~~Lh~~g~k~v~iidP-~I~~~~~y~~y~~g~~~~~fik~~g~~~~g~~WpG~~~~pDf~np~a~~ww 451 (946)
+|-.+ +++.||+++|++|+++|+=+-| |...+...-.+-+|.. -+... +...-....|. +...|+.||+++++.
T Consensus 212 ~~g~~~~~~~lv~~~H~~gi~VilD~v~nH~~~~~~~l~~~dg~~-~y~~~-~~~~g~~~~w~--~~~~~~~~~eVr~~l 287 (639)
T PRK14706 212 RLGTPEDFKYLVNHLHGLGIGVILDWVPGHFPTDESGLAHFDGGP-LYEYA-DPRKGYHYDWN--TYIFDYGRNEVVMFL 287 (639)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEecccccCcchhhhhccCCCc-ceecc-CCcCCcCCCCC--CcccCCCCHHHHHHH
Confidence 44333 5899999999999999986555 4443211000000000 01011 10000012242 234799999999999
Q ss_pred HHHHHHhhccCCccEEEEeCC
Q 002256 452 GDEIRRFHELVPVDGLWIDMN 472 (946)
Q Consensus 452 ~~~~~~~~~~~g~dg~W~Dmn 472 (946)
.+.++-+.+..+||||=+|.-
T Consensus 288 ~~~~~~W~~e~~iDG~R~Dav 308 (639)
T PRK14706 288 IGSALKWLQDFHVDGLRVDAV 308 (639)
T ss_pred HHHHHHHHHHhCCCeEEEeee
Confidence 999988888899999999963
No 70
>PRK14705 glycogen branching enzyme; Provisional
Probab=80.64 E-value=8.9 Score=50.70 Aligned_cols=94 Identities=13% Similarity=0.217 Sum_probs=59.8
Q ss_pred CCCCh-hHHHHHHHHHHcCCEEEEEeCC-CCccCCCcHHhHhcccCc-EEEeeCCcceEEEecCCcccccCCCCHHHHHH
Q 002256 374 NYPRP-KLLAFLEKIHKIGMKYIVIIDP-GIGVNSSYGVYQRGIAND-VFIKYEGEPYLAQVWPGAVNFPDFLNPKTVSW 450 (946)
Q Consensus 374 ~FP~p-~l~~~v~~Lh~~g~k~v~iidP-~I~~~~~y~~y~~g~~~~-~fik~~g~~~~g~~WpG~~~~pDf~np~a~~w 450 (946)
+|-.| +++.||+.+|++|+++|+=+-| |...+. . +....+.. +|-..+...-....|.. ...||.+|+++++
T Consensus 810 ryGt~~dfk~lVd~~H~~GI~VILD~V~nH~~~d~-~--~l~~fdg~~~y~~~d~~~g~~~~Wg~--~~fn~~~~eVr~f 884 (1224)
T PRK14705 810 RFGHPDEFRFLVDSLHQAGIGVLLDWVPAHFPKDS-W--ALAQFDGQPLYEHADPALGEHPDWGT--LIFDFGRTEVRNF 884 (1224)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEeccccCCcch-h--hhhhcCCCcccccCCcccCCCCCCCC--ceecCCCHHHHHH
Confidence 55554 5899999999999999986655 443321 1 00001111 11111111001233533 3479999999999
Q ss_pred HHHHHHHhhccCCccEEEEeCC
Q 002256 451 WGDEIRRFHELVPVDGLWIDMN 472 (946)
Q Consensus 451 w~~~~~~~~~~~g~dg~W~Dmn 472 (946)
..+.+.-+.+.++||||=+|.-
T Consensus 885 li~~a~~Wl~eyhiDGfR~Dav 906 (1224)
T PRK14705 885 LVANALYWLDEFHIDGLRVDAV 906 (1224)
T ss_pred HHHHHHHHHHHhCCCcEEEeeh
Confidence 9999998998899999999974
No 71
>KOG0470 consensus 1,4-alpha-glucan branching enzyme/starch branching enzyme II [Carbohydrate transport and metabolism]
Probab=79.04 E-value=4.8 Score=49.44 Aligned_cols=90 Identities=17% Similarity=0.367 Sum_probs=62.8
Q ss_pred hHHHHHHHHHHcCCEEEE-EeCCCCccC--CCcHHhHhcccCcEEEeeCCcceEEEecCCcccccCCCCHHHHHHHHHHH
Q 002256 379 KLLAFLEKIHKIGMKYIV-IIDPGIGVN--SSYGVYQRGIANDVFIKYEGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEI 455 (946)
Q Consensus 379 ~l~~~v~~Lh~~g~k~v~-iidP~I~~~--~~y~~y~~g~~~~~fik~~g~~~~g~~WpG~~~~pDf~np~a~~ww~~~~ 455 (946)
++++||+++|..|+-+++ +|.-|.+.+ .++..| +|+..++|... |. .+.-|-+.+...+..+|.+.++-.+.+
T Consensus 312 efK~lVd~aHs~GI~VlLDVV~sHaa~n~~d~l~~f-dGid~~~Yf~~-~~--r~~h~~~~~r~fn~~~~~V~rflL~nL 387 (757)
T KOG0470|consen 312 EFKELVDKAHSLGIEVLLDVVHSHAAKNSKDGLNMF-DGIDNSVYFHS-GP--RGYHNSWCSRLFNYNHPVVLRFLLSNL 387 (757)
T ss_pred HHHHHHHHHhhCCcEEehhhhhhhcccCcCCcchhc-cCcCCceEEEe-CC--cccccccccccccCCCHHHHHHHHHHH
Confidence 599999999999998765 344444443 233343 57775555442 22 233444556677889999999888888
Q ss_pred HHhhccCCccEEEEeCC
Q 002256 456 RRFHELVPVDGLWIDMN 472 (946)
Q Consensus 456 ~~~~~~~g~dg~W~Dmn 472 (946)
+-+...+.||||=.|.-
T Consensus 388 r~WVtEY~vDGFRFD~~ 404 (757)
T KOG0470|consen 388 RWWVTEYHVDGFRFDLV 404 (757)
T ss_pred HHHHHheeccceEEcch
Confidence 88888899999998853
No 72
>PLN02784 alpha-amylase
Probab=78.58 E-value=19 Score=45.79 Aligned_cols=134 Identities=13% Similarity=0.176 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHcCCCceEEEecCCC--C--CCc--e-eeeeCCCCCCC-hhHHHHHHHHHHcCCEEEEEeCC-CCccC-
Q 002256 336 SVVEDVVENYKKAKIPLDVIWNDDDH--M--DGH--K-DFTLNPTNYPR-PKLLAFLEKIHKIGMKYIVIIDP-GIGVN- 405 (946)
Q Consensus 336 ~~v~~vv~~~~~~~IPlD~iw~Didy--m--~~~--~-~Ft~d~~~FP~-p~l~~~v~~Lh~~g~k~v~iidP-~I~~~- 405 (946)
..+.+-++.+++.| +++||+-.-+ . .+| . .|..| .+|-. .+|++||+.+|++|+++++=+=+ |-...
T Consensus 521 ~~I~ekldyL~~LG--~taIWLpP~~~s~s~~GY~p~D~y~ld-s~yGT~~ELk~LI~a~H~~GIkVIlDiViNH~ag~f 597 (894)
T PLN02784 521 MELGEKAAELSSLG--FTVVWLPPPTESVSPEGYMPKDLYNLN-SRYGTIDELKDLVKSFHEVGIKVLGDAVLNHRCAHF 597 (894)
T ss_pred HHHHHHHHHHHHhC--CCEEEeCCCCCCCCCCCcCcccccccC-cCcCCHHHHHHHHHHHHHCCCEEEEEECcccccccc
Confidence 34555566666554 5778875421 1 122 1 24455 35554 36999999999999999874432 22111
Q ss_pred ----CCcHHhHhcccCcEE-EeeCCcceE--EEecCCc--ccc--cCCCCHHHHHHHHHHHHHhhccCCccEEEEeCC
Q 002256 406 ----SSYGVYQRGIANDVF-IKYEGEPYL--AQVWPGA--VNF--PDFLNPKTVSWWGDEIRRFHELVPVDGLWIDMN 472 (946)
Q Consensus 406 ----~~y~~y~~g~~~~~f-ik~~g~~~~--g~~WpG~--~~~--pDf~np~a~~ww~~~~~~~~~~~g~dg~W~Dmn 472 (946)
..+..|..-..-+-. +-.+...|. |..|.|. ..+ +|..||++++...+-++-+.+.+|||||=+|+-
T Consensus 598 ~~~~g~~~~f~g~~dW~d~~i~~ddp~F~GrG~~~sgddf~~lPDLDh~npeVR~eL~~WlkWL~~e~G~DGfRLDaV 675 (894)
T PLN02784 598 QNQNGVWNIFGGRLNWDDRAVVADDPHFQGRGNKSSGDNFHAAPNIDHSQDFVRKDLKEWLCWMRKEVGYDGWRLDFV 675 (894)
T ss_pred cCCCCcccccCCeecCCCCcccCCCcccCCcCCcCcccccCcCCcCCCCCHHHHHHHHHHHHHHHhccCCCEEEEecc
Confidence 111112110000000 000011111 1222222 234 456789999887777776666799999999985
No 73
>PRK12568 glycogen branching enzyme; Provisional
Probab=77.56 E-value=6.1 Score=49.49 Aligned_cols=99 Identities=13% Similarity=0.267 Sum_probs=61.3
Q ss_pred eeeCCCCCCCh-hHHHHHHHHHHcCCEEEEEeCC-CCccCCC-cHHhHhcccCcEEEeeCCcceEEEecCCcccccCCCC
Q 002256 368 FTLNPTNYPRP-KLLAFLEKIHKIGMKYIVIIDP-GIGVNSS-YGVYQRGIANDVFIKYEGEPYLAQVWPGAVNFPDFLN 444 (946)
Q Consensus 368 Ft~d~~~FP~p-~l~~~v~~Lh~~g~k~v~iidP-~I~~~~~-y~~y~~g~~~~~fik~~g~~~~g~~WpG~~~~pDf~n 444 (946)
|..++ +|..+ +++.||+++|++|+++|+=+-| |...+.. ...|+ + ..+|-..+...-....|. +...|+.|
T Consensus 309 ~a~~~-~~G~~~dfk~lV~~~H~~Gi~VIlD~V~nH~~~d~~~l~~fd-g--~~~Ye~~d~~~g~~~~W~--~~~~N~~~ 382 (730)
T PRK12568 309 YAPTA-RHGSPDGFAQFVDACHRAGIGVILDWVSAHFPDDAHGLAQFD-G--AALYEHADPREGMHRDWN--TLIYNYGR 382 (730)
T ss_pred CccCc-ccCCHHHHHHHHHHHHHCCCEEEEEeccccCCccccccccCC-C--ccccccCCCcCCccCCCC--CeecccCC
Confidence 44443 55554 5899999999999999986665 4443210 01111 0 011111110000112342 23469999
Q ss_pred HHHHHHHHHHHHHhhccCCccEEEEeCC
Q 002256 445 PKTVSWWGDEIRRFHELVPVDGLWIDMN 472 (946)
Q Consensus 445 p~a~~ww~~~~~~~~~~~g~dg~W~Dmn 472 (946)
|+++++..+.++.+.+..++|||=+|.-
T Consensus 383 peVr~~li~~a~~Wl~eyhIDG~R~DAv 410 (730)
T PRK12568 383 PEVTAYLLGSALEWIEHYHLDGLRVDAV 410 (730)
T ss_pred HHHHHHHHHHHHHHHHHhCceEEEEcCH
Confidence 9999999999988888899999999953
No 74
>COG0366 AmyA Glycosidases [Carbohydrate transport and metabolism]
Probab=75.20 E-value=28 Score=41.35 Aligned_cols=132 Identities=18% Similarity=0.308 Sum_probs=75.3
Q ss_pred CHHHHHHHHHHHHHcCCCceEEEecCCCC-------CCceee-eeCCCCCCC-hhHHHHHHHHHHcCCEEEEEeCC-CCc
Q 002256 334 NLSVVEDVVENYKKAKIPLDVIWNDDDHM-------DGHKDF-TLNPTNYPR-PKLLAFLEKIHKIGMKYIVIIDP-GIG 403 (946)
Q Consensus 334 ~~~~v~~vv~~~~~~~IPlD~iw~Didym-------~~~~~F-t~d~~~FP~-p~l~~~v~~Lh~~g~k~v~iidP-~I~ 403 (946)
+..-+.+-++-+++ +-+|+||+---+- ....|| ..|+ .|.. .+++++++++|++|+|+|+=+-. +.+
T Consensus 27 dl~Gi~~~LdYl~~--LGv~aiwl~Pi~~s~~~~~gY~~~Dy~~id~-~~Gt~~d~~~li~~~H~~gi~vi~D~V~NH~s 103 (505)
T COG0366 27 DLKGITEKLDYLKE--LGVDAIWLSPIFESPQADHGYDVSDYTKVDP-HFGTEEDFKELVEEAHKRGIKVILDLVFNHTS 103 (505)
T ss_pred cHHhHHHhhhHHHH--hCCCEEEeCCCCCCCccCCCccccchhhcCc-ccCCHHHHHHHHHHHHHCCCEEEEEeccCcCC
Confidence 45555555555554 5568899763322 112333 2444 5554 35889999999999999885543 222
Q ss_pred cCCCcHHhHhccc-------CcEEEee----------C-CcceEEEecC----C---------cccccCCCCHHHHHHHH
Q 002256 404 VNSSYGVYQRGIA-------NDVFIKY----------E-GEPYLAQVWP----G---------AVNFPDFLNPKTVSWWG 452 (946)
Q Consensus 404 ~~~~y~~y~~g~~-------~~~fik~----------~-g~~~~g~~Wp----G---------~~~~pDf~np~a~~ww~ 452 (946)
. ..+-+++..+ .++|+=. + -..+.+..|. + ...-+++.||+++++..
T Consensus 104 ~--~~~~f~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~n~~v~~~~~ 181 (505)
T COG0366 104 D--EHPWFKEARSSKPNPKRSDYYIWRDPDPDGTPPNNWFSVFGGDAWTWGNTGEYYLHLFSSEQPDLNWENPEVREELL 181 (505)
T ss_pred C--ccHHHHHHhcCCCCcccCCCceEccCcccCCCCCcchhhcCCCCCCcCCCCceEEEecCCCCCCcCCCCHHHHHHHH
Confidence 1 1222322221 1444410 0 0111222231 1 11126899999999999
Q ss_pred HHHHHhhccCCccEEEEeC
Q 002256 453 DEIRRFHELVPVDGLWIDM 471 (946)
Q Consensus 453 ~~~~~~~~~~g~dg~W~Dm 471 (946)
+.++.+.+ .|+|||=+|-
T Consensus 182 ~~~~~W~~-~gvDGfRlDa 199 (505)
T COG0366 182 DVVKFWLD-KGVDGFRLDA 199 (505)
T ss_pred HHHHHHHH-cCCCeEEecc
Confidence 87777776 7999999994
No 75
>PLN02982 galactinol-raffinose galactosyltransferase/ghydrolase, hydrolyzing O-glycosyl compounds
Probab=72.29 E-value=2.7e+02 Score=35.34 Aligned_cols=71 Identities=18% Similarity=0.294 Sum_probs=51.0
Q ss_pred EEEEEeCCChHHHHHHHHhhc----C------CCCCCCcccccceeccCC--CC--CHHHHHHHHHHHHHcCCCceEEEe
Q 002256 292 DFYFFAGPSPLAVVDQYTAFI----G------RPAPMPYWSLGFHQCRWG--YH--NLSVVEDVVENYKKAKIPLDVIWN 357 (946)
Q Consensus 292 D~y~f~Gp~p~~vi~qY~~lt----G------~p~lpP~WalG~hq~r~g--Y~--~~~~v~~vv~~~~~~~IPlD~iw~ 357 (946)
=.|+-+|.+|-+++++=.+.+ | +-.+ |.-.=.|=.|.|. |. +.+-|++=++.+.+.|+|-.-+.+
T Consensus 182 ~~yvh~g~nPy~li~~a~~~v~~hl~TF~~~eeK~~-P~~vd~FGWCTWDAFY~~V~p~GV~~Gv~~l~~gG~pprfvII 260 (865)
T PLN02982 182 IAYVHVSDNPYNLMKEAYSALRVHLNTFRLLEEKAL-PKIVDKFGWCTWDAFYLTVDPVGVWHGVKEFAEGGVPPRFLII 260 (865)
T ss_pred EEEEecCCCHHHHHHHHHHHHHHHhcccchhhhccC-ccccccceEEeechhhcccCHHHHHHHHHHHhcCCCCccEEEE
Confidence 457778999999987754332 2 1223 3333345568885 54 557799999999999999999999
Q ss_pred cCCCCC
Q 002256 358 DDDHMD 363 (946)
Q Consensus 358 Didym~ 363 (946)
|+.|..
T Consensus 261 DDGWQs 266 (865)
T PLN02982 261 DDGWQS 266 (865)
T ss_pred ecchhh
Confidence 999863
No 76
>PLN02877 alpha-amylase/limit dextrinase
Probab=69.23 E-value=18 Score=46.76 Aligned_cols=89 Identities=11% Similarity=0.147 Sum_probs=57.2
Q ss_pred hHHHHHHHHHHcCCEEEEEeCC-CCccC-C-Cc-HHhHhcccCcEEEee--CCcceEEEecCCcccccCCCCHHHHHHHH
Q 002256 379 KLLAFLEKIHKIGMKYIVIIDP-GIGVN-S-SY-GVYQRGIANDVFIKY--EGEPYLAQVWPGAVNFPDFLNPKTVSWWG 452 (946)
Q Consensus 379 ~l~~~v~~Lh~~g~k~v~iidP-~I~~~-~-~y-~~y~~g~~~~~fik~--~g~~~~g~~WpG~~~~pDf~np~a~~ww~ 452 (946)
++++||+.||++|+++|+=+=. |.... . .. ..++ ....++|.+. +|..-...|+ + -..--++-++++..
T Consensus 467 efk~mV~~lH~~GI~VImDVVyNHt~~~g~~~~~s~ld-~~vP~YY~r~~~~G~~~ns~c~-n---~~Ase~~mvrklIl 541 (970)
T PLN02877 467 EFRKMVQALNRIGLRVVLDVVYNHLHSSGPFDENSVLD-KIVPGYYLRRNSDGFIENSTCV-N---NTASEHYMVDRLIV 541 (970)
T ss_pred HHHHHHHHHHHCCCEEEEEECCccccCCCCcchhhccc-CCCCCceEEECCCCCcccCCcc-C---CCccCCHHHHHHHH
Confidence 5899999999999999885433 44321 0 00 1222 2344677763 3432111121 1 12346688899999
Q ss_pred HHHHHhhccCCccEEEEeCC
Q 002256 453 DEIRRFHELVPVDGLWIDMN 472 (946)
Q Consensus 453 ~~~~~~~~~~g~dg~W~Dmn 472 (946)
+-++.+...++||||=+|.-
T Consensus 542 Dsl~yW~~ey~VDGFRFDlm 561 (970)
T PLN02877 542 DDLLNWAVNYKVDGFRFDLM 561 (970)
T ss_pred HHHHHHHHHhCCCEEEEEcc
Confidence 99998888899999999964
No 77
>smart00812 Alpha_L_fucos Alpha-L-fucosidase. O-Glycosyl hydrolases (EC 3.2.1.-) are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site PUBMED:. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in 'clans'. Family 29 encompasses alpha-L-fucosidases, which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Deficiency of alpha-L-fucosidase results in the lysosomal storage disease fucosidosis.
Probab=68.84 E-value=9.6 Score=44.36 Aligned_cols=28 Identities=21% Similarity=0.584 Sum_probs=23.7
Q ss_pred eeCCCCCCChhHHHHHHHHHHcCCEEEEEeC
Q 002256 369 TLNPTNYPRPKLLAFLEKIHKIGMKYIVIID 399 (946)
Q Consensus 369 t~d~~~FP~p~l~~~v~~Lh~~g~k~v~iid 399 (946)
+|++++|- |+ +.++..++.|+|+++++-
T Consensus 75 ~F~p~~fD-~~--~Wa~~~k~AGakY~vlTa 102 (384)
T smart00812 75 QFTAEKFD-PE--EWADLFKKAGAKYVVLTA 102 (384)
T ss_pred cCCchhCC-HH--HHHHHHHHcCCCeEEeee
Confidence 46888884 55 999999999999999873
No 78
>COG2342 Predicted extracellular endo alpha-1,4 polygalactosaminidase or related polysaccharide hydrolase [Carbohydrate transport and metabolism]
Probab=68.41 E-value=41 Score=37.21 Aligned_cols=107 Identities=21% Similarity=0.352 Sum_probs=64.6
Q ss_pred CCCceEEEecCCCCCCceeeeeCCCCCCChhHHHHHHHHHHcCCEEEEEeCCCCccCCCcHHhHhcccCcEEEee-C--C
Q 002256 349 KIPLDVIWNDDDHMDGHKDFTLNPTNYPRPKLLAFLEKIHKIGMKYIVIIDPGIGVNSSYGVYQRGIANDVFIKY-E--G 425 (946)
Q Consensus 349 ~IPlD~iw~Didym~~~~~Ft~d~~~FP~p~l~~~v~~Lh~~g~k~v~iidP~I~~~~~y~~y~~g~~~~~fik~-~--g 425 (946)
.-|.|.+.+|..|-.. |-.|...+=++.+++.|++.|..++=+-. ++|..|= ++....+. + |
T Consensus 41 ~~~f~llVVDps~~g~----------~~~~~~~eelr~~~~gg~~pIAYlsIg~a--e~yR~Yw---d~~w~~~~p~wLg 105 (300)
T COG2342 41 NSPFDLLVVDPSYCGP----------FNTPWTIEELRTKADGGVKPIAYLSIGEA--ESYRFYW---DKYWLTGRPDWLG 105 (300)
T ss_pred cCCCcEEEEeccccCC----------CCCcCcHHHHHHHhcCCeeEEEEEechhh--hhhhhHh---hhhhhcCCccccc
Confidence 4699999988754321 11122225567777789888888875543 5676652 12221111 1 1
Q ss_pred cceEEEecCCcccccCCCCHHHHHHHHHHHHHhhccCCccEEEEeCCCC
Q 002256 426 EPYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHELVPVDGLWIDMNEA 474 (946)
Q Consensus 426 ~~~~g~~WpG~~~~pDf~np~a~~ww~~~~~~~~~~~g~dg~W~DmnEp 474 (946)
.. ..-|||+ +.+-|=.|+=++-+...++++.+ .||||.-+|.-++
T Consensus 106 ~e--dP~W~Gn-y~VkYW~~eWkdii~~~l~rL~d-~GfdGvyLD~VD~ 150 (300)
T COG2342 106 EE--DPEWPGN-YAVKYWEPEWKDIIRSYLDRLID-QGFDGVYLDVVDA 150 (300)
T ss_pred CC--CCCCCCC-ceeeccCHHHHHHHHHHHHHHHH-ccCceEEEeeech
Confidence 11 1349996 34456678766666677777665 6999999997654
No 79
>PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This group of beta-galactosidase enzymes (3.2.1.23 from EC) belong to the glycosyl hydrolase 42 family GH42 from CAZY. The enzyme catalyses the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.; GO: 0004565 beta-galactosidase activity, 0005975 carbohydrate metabolic process, 0009341 beta-galactosidase complex; PDB: 1KWK_A 1KWG_A 3U7V_A.
Probab=60.01 E-value=20 Score=41.45 Aligned_cols=124 Identities=20% Similarity=0.132 Sum_probs=69.5
Q ss_pred CHHHHHHHHHHHHHcCCCceEE----EecCCCCCCceeeeeCCCCCCChhHHHHHHHHHHcCCEEEEEeCCCCccCCCcH
Q 002256 334 NLSVVEDVVENYKKAKIPLDVI----WNDDDHMDGHKDFTLNPTNYPRPKLLAFLEKIHKIGMKYIVIIDPGIGVNSSYG 409 (946)
Q Consensus 334 ~~~~v~~vv~~~~~~~IPlD~i----w~Didym~~~~~Ft~d~~~FP~p~l~~~v~~Lh~~g~k~v~iidP~I~~~~~y~ 409 (946)
+.+++++.++.|+++||-+=.| |..+.=-.+.-||+ .+..+++.++++|+|+++.+-.+-. +
T Consensus 8 ~~e~~~~d~~~m~~~G~n~vri~~~~W~~lEP~eG~ydF~---------~lD~~l~~a~~~Gi~viL~~~~~~~-----P 73 (374)
T PF02449_consen 8 PEEEWEEDLRLMKEAGFNTVRIGEFSWSWLEPEEGQYDFS---------WLDRVLDLAAKHGIKVILGTPTAAP-----P 73 (374)
T ss_dssp -CCHHHHHHHHHHHHT-SEEEE-CCEHHHH-SBTTB---H---------HHHHHHHHHHCTT-EEEEEECTTTS------
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEEechhhccCCCCeeecH---------HHHHHHHHHHhccCeEEEEeccccc-----c
Confidence 3578899999999999887664 22222223333443 3669999999999999987753211 2
Q ss_pred HhHhcccCcEEEe-eCCcceEEEecCCcccccCCCCHHHHHHHHHHHHHh----hccCCccEEEEeCCCCcc
Q 002256 410 VYQRGIANDVFIK-YEGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRF----HELVPVDGLWIDMNEASN 476 (946)
Q Consensus 410 ~y~~g~~~~~fik-~~g~~~~g~~WpG~~~~pDf~np~a~~ww~~~~~~~----~~~~g~dg~W~DmnEps~ 476 (946)
.+-.-.--++... .+|... -.|.....++.+|..++.....++.+ .+.-.+-|+-+| ||+..
T Consensus 74 ~Wl~~~~Pe~~~~~~~g~~~----~~g~~~~~~~~~p~yr~~~~~~~~~l~~~y~~~p~vi~~~i~-NE~~~ 140 (374)
T PF02449_consen 74 AWLYDKYPEILPVDADGRRR----GFGSRQHYCPNSPAYREYARRFIRALAERYGDHPAVIGWQID-NEPGY 140 (374)
T ss_dssp HHHHCCSGCCC-B-TTTSBE----ECCCSTT-HCCHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEC-CSTTC
T ss_pred cchhhhcccccccCCCCCcC----ccCCccccchhHHHHHHHHHHHHHHHHhhccccceEEEEEec-cccCc
Confidence 2211111122222 345432 13344456788999888777665544 333346677776 88764
No 80
>smart00642 Aamy Alpha-amylase domain.
Probab=55.52 E-value=39 Score=34.51 Aligned_cols=66 Identities=12% Similarity=0.197 Sum_probs=40.3
Q ss_pred CCHHHHHHHHHHHHHcCCCceEEEecCCCCCCc---eeeeeCCC-------CCCC-hhHHHHHHHHHHcCCEEEEEeCC
Q 002256 333 HNLSVVEDVVENYKKAKIPLDVIWNDDDHMDGH---KDFTLNPT-------NYPR-PKLLAFLEKIHKIGMKYIVIIDP 400 (946)
Q Consensus 333 ~~~~~v~~vv~~~~~~~IPlD~iw~Didym~~~---~~Ft~d~~-------~FP~-p~l~~~v~~Lh~~g~k~v~iidP 400 (946)
.+...+.+-+..+++.| +++||+-.=+.... .++-+++. +|-. .++++||+++|++|+++++=+-|
T Consensus 16 G~~~gi~~~l~yl~~lG--~~~I~l~Pi~~~~~~~~~~~gY~~~d~~~i~~~~Gt~~d~~~lv~~~h~~Gi~vilD~V~ 92 (166)
T smart00642 16 GDLQGIIEKLDYLKDLG--VTAIWLSPIFESPQGYPSYHGYDISDYKQIDPRFGTMEDFKELVDAAHARGIKVILDVVI 92 (166)
T ss_pred cCHHHHHHHHHHHHHCC--CCEEEECcceeCCCCCCCCCCcCccccCCCCcccCCHHHHHHHHHHHHHCCCEEEEEECC
Confidence 35666776666666655 68888753221111 11222222 3332 35899999999999999886555
No 81
>PF14885 GHL15: Hypothetical glycosyl hydrolase family 15
Probab=54.97 E-value=22 Score=31.90 Aligned_cols=55 Identities=25% Similarity=0.463 Sum_probs=38.3
Q ss_pred cCcEEEee-CCcceEEEecCCcc---cccCCCCHHHHHHHHHHHHHhhccCCccEEEEeCC
Q 002256 416 ANDVFIKY-EGEPYLAQVWPGAV---NFPDFLNPKTVSWWGDEIRRFHELVPVDGLWIDMN 472 (946)
Q Consensus 416 ~~~~fik~-~g~~~~g~~WpG~~---~~pDf~np~a~~ww~~~~~~~~~~~g~dg~W~Dmn 472 (946)
..+.|.|+ +|+.. .-|+|.. -..+..+|..+.||.+.+.+.+..-++||+-.|-+
T Consensus 18 ~~~w~a~~~~g~~i--~~W~~~~~~~~~~~~~~~~~r~~w~~~v~e~~~~s~~DGv~~Dn~ 76 (79)
T PF14885_consen 18 RADWFAKTANGSRI--SEWPGYPGHYQMYVWSCPDYRRYWVDAVVEELQNSPWDGVFADND 76 (79)
T ss_pred CchhhccccCccce--eecCCCCceeeeccCCcchHHHHHHHHHHHHHhcCccceeeeecc
Confidence 34566664 45443 4577643 23566779999999999877665669999999954
No 82
>cd06416 GH25_Lys1-like Lys-1 is a lysozyme encoded by the Caenorhabditis elegans lys-1 gene. This gene is one of a several lysozyme genes upregulated upon infection by the Gram-negative bacterial pathogen Serratia marcescens. Lys-1 contains a glycosyl hydrolase family 25 (GH25) catalytic domain. This family also includes Lys-5 from Caenorhabditis elegans.
Probab=47.22 E-value=27 Score=36.42 Aligned_cols=74 Identities=11% Similarity=0.123 Sum_probs=50.1
Q ss_pred ceeccCC--CCCHHHHHHHHHHHHHcCCCceEEEecCCCCCCceeeeeCCCCCCChhHHHHHHHHHHcCCEEEEEeCCC
Q 002256 325 FHQCRWG--YHNLSVVEDVVENYKKAKIPLDVIWNDDDHMDGHKDFTLNPTNYPRPKLLAFLEKIHKIGMKYIVIIDPG 401 (946)
Q Consensus 325 ~hq~r~g--Y~~~~~v~~vv~~~~~~~IPlD~iw~Didym~~~~~Ft~d~~~FP~p~l~~~v~~Lh~~g~k~v~iidP~ 401 (946)
||-++-. ..-.+++..+++..+..++..+.+|+|++...+ .++.+... -...+++|++.|++.|.+.++...+.
T Consensus 58 Yhf~~~~~~~~~~~Qa~~f~~~~~~~~~~~~~i~lDiE~~~~--~~~~~~~~-~~~~~~~f~~~~~~~G~~~~iYt~~~ 133 (196)
T cd06416 58 YFFPCINCCGSAAGQVQTFLQYLKANGIKYGTVWIDIEQNPC--QWSSDVAS-NCQFLQELVSAAKALGLKVGIYSSQY 133 (196)
T ss_pred EEEecCCCCCCHHHHHHHHHHHHHhCCCceeEEEEEEecCCC--CCcCCHHH-HHHHHHHHHHHHHHhCCeEEEEcCcc
Confidence 6766544 344678888999988888888889999987522 22222111 11135688999998999998887764
No 83
>PRK15447 putative protease; Provisional
Probab=45.55 E-value=65 Score=36.22 Aligned_cols=116 Identities=13% Similarity=0.144 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHHHcCCCceEEEecCCCCCCceeeeeCCCCCCChhHHHHHHHHHHcCCEEEEEeCCCC-ccCCCcHHhHh
Q 002256 335 LSVVEDVVENYKKAKIPLDVIWNDDDHMDGHKDFTLNPTNYPRPKLLAFLEKIHKIGMKYIVIIDPGI-GVNSSYGVYQR 413 (946)
Q Consensus 335 ~~~v~~vv~~~~~~~IPlD~iw~Didym~~~~~Ft~d~~~FP~p~l~~~v~~Lh~~g~k~v~iidP~I-~~~~~y~~y~~ 413 (946)
...++++.....+.| .|+|++..+-...+. +|-..++++.++.+|+.|.|+.+. -|.| ..+.....+.+
T Consensus 14 ~~~~~~~~~~~~~~g--aDaVY~g~~~~~~R~-------~f~~~~l~e~v~~~~~~gkkvyva-~p~i~~~~~e~~~l~~ 83 (301)
T PRK15447 14 KETVRDFYQRAADSP--VDIVYLGETVCSKRR-------ELKVGDWLELAERLAAAGKEVVLS-TLALVEAPSELKELRR 83 (301)
T ss_pred CCCHHHHHHHHHcCC--CCEEEECCccCCCcc-------CCCHHHHHHHHHHHHHcCCEEEEE-ecccccCHHHHHHHHH
Confidence 344566677777776 999999865544443 355567899999999999998774 4554 32333333333
Q ss_pred cccCc---EEEeeCCcceEEEecCCc----ccccCCCCHHHHHHHHHHHHHhhccCCccEEEE
Q 002256 414 GIAND---VFIKYEGEPYLAQVWPGA----VNFPDFLNPKTVSWWGDEIRRFHELVPVDGLWI 469 (946)
Q Consensus 414 g~~~~---~fik~~g~~~~g~~WpG~----~~~pDf~np~a~~ww~~~~~~~~~~~g~dg~W~ 469 (946)
-.+.+ +.+.+=|.....+- .|. ..-..-+|..+.+||.+ .|++.+++
T Consensus 84 ~l~~~~~~v~v~d~g~l~~~~e-~~~~l~~d~~lni~N~~a~~~l~~--------~G~~rv~l 137 (301)
T PRK15447 84 LVENGEFLVEANDLGAVRLLAE-RGLPFVAGPALNCYNAATLALLAR--------LGATRWCM 137 (301)
T ss_pred HHhcCCCEEEEeCHHHHHHHHh-cCCCEEEecccccCCHHHHHHHHH--------cCCcEEEE
Confidence 33333 22221121110000 111 12234589999998865 36665544
No 84
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.
Probab=44.50 E-value=1.1e+02 Score=34.41 Aligned_cols=124 Identities=17% Similarity=0.198 Sum_probs=76.7
Q ss_pred eccCCCCCHHHHHHHHHHHHHcCCCceEEEecCCCC-----CCceeee---------eCCCCCCChhHHHHHHHHHHcCC
Q 002256 327 QCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDHM-----DGHKDFT---------LNPTNYPRPKLLAFLEKIHKIGM 392 (946)
Q Consensus 327 q~r~gY~~~~~v~~vv~~~~~~~IPlD~iw~Didym-----~~~~~Ft---------~d~~~FP~p~l~~~v~~Lh~~g~ 392 (946)
.+| .|.+.+.++++++.|...++-.=-+++-+|.- ..+...+ -....|-..+++++++.-+++|+
T Consensus 8 ~aR-~~~~~~~lk~~id~ma~~K~N~lhlHl~D~~~~~le~~~~p~l~~~g~~~~~~~~~~~yT~~di~elv~yA~~rgI 86 (303)
T cd02742 8 VSR-HFLSVESIKRTIDVLARYKINTFHWHLTDDQAWRIESKKFPELAEKGGQINPRSPGGFYTYAQLKDIIEYAAARGI 86 (303)
T ss_pred ccc-cCcCHHHHHHHHHHHHHhCCcEEEEeeecCCCceEeeCccchhhhhcccccCCCCCCeECHHHHHHHHHHHHHcCC
Confidence 567 78899999999999999999886666654311 1111111 01123444678999999999999
Q ss_pred EEEEEeC-CCCccCCCcHHhHhcccCcEEEeeCCcceEEEecCCcccccCCCCHHHHHHHHHHHHHhhcc
Q 002256 393 KYIVIID-PGIGVNSSYGVYQRGIANDVFIKYEGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHEL 461 (946)
Q Consensus 393 k~v~iid-P~I~~~~~y~~y~~g~~~~~fik~~g~~~~g~~WpG~~~~pDf~np~a~~ww~~~~~~~~~~ 461 (946)
++|+-|| |+=... --..|.+ +..+ .+.+..|.....-.|..+|++.++-.+.++++.+.
T Consensus 87 ~viPEiD~PGH~~a-~~~~~p~-----l~~~----~~~~~~~~~~~~~l~~~~~~t~~fl~~l~~e~~~l 146 (303)
T cd02742 87 EVIPEIDMPGHSTA-FVKSFPK-----LLTE----CYAGLKLRDVFDPLDPTLPKGYDFLDDLFGEIAEL 146 (303)
T ss_pred EEEEeccchHHHHH-HHHhCHH-----hccC----ccccCCCCCCCCccCCCCccHHHHHHHHHHHHHHh
Confidence 9999988 542110 0001111 0000 00122233334567999999999999988887653
No 85
>PRK15063 isocitrate lyase; Provisional
Probab=34.56 E-value=81 Score=37.13 Aligned_cols=66 Identities=17% Similarity=0.268 Sum_probs=49.9
Q ss_pred CCCCHHHHHHHHHHHHHcCCCceEEEecCCCCCCceeeeeCCCCCCChhHHHHHHHHHHcCCEEEEEeCCCCc
Q 002256 331 GYHNLSVVEDVVENYKKAKIPLDVIWNDDDHMDGHKDFTLNPTNYPRPKLLAFLEKIHKIGMKYIVIIDPGIG 403 (946)
Q Consensus 331 gY~~~~~v~~vv~~~~~~~IPlD~iw~Didym~~~~~Ft~d~~~FP~p~l~~~v~~Lh~~g~k~v~iidP~I~ 403 (946)
+..+.++++++++..+ ..+|.-.+-. ..-..|+|... |.+..++.|+++|.++|+++++|--.++.
T Consensus 286 ~~~d~ee~~~fa~~v~-~~~P~~~lay-----n~sPsfnW~~~-~~~~~~~~f~~eL~~~Gy~~~~~~la~~h 351 (428)
T PRK15063 286 STPDLEEARRFAEAIH-AKFPGKLLAY-----NCSPSFNWKKN-LDDATIAKFQRELGAMGYKFQFITLAGFH 351 (428)
T ss_pred CCCCHHHHHHHHHhhc-ccCccceeec-----CCCCCcccccc-cCHHHHHHHHHHHHHcCceEEEechHHHH
Confidence 3457888998888764 3357544322 23457999885 99989999999999999999998776654
No 86
>KOG2366 consensus Alpha-D-galactosidase (melibiase) [Carbohydrate transport and metabolism]
Probab=34.55 E-value=57 Score=37.56 Aligned_cols=66 Identities=18% Similarity=0.345 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHHc---CCCceEEEecCCCCCCceeee----eCCCCCCChhHHHHHHHHHHcCCEEEEEeCCC
Q 002256 335 LSVVEDVVENYKKA---KIPLDVIWNDDDHMDGHKDFT----LNPTNYPRPKLLAFLEKIHKIGMKYIVIIDPG 401 (946)
Q Consensus 335 ~~~v~~vv~~~~~~---~IPlD~iw~Didym~~~~~Ft----~d~~~FP~p~l~~~v~~Lh~~g~k~v~iidP~ 401 (946)
+.-.+++++.+.+. .+-..-|.+|+=|++..+|++ -|+++||. .++++.+.+|.+|.|+-+.-|-|
T Consensus 59 E~l~~~~ad~mvseG~~~vGY~yi~iDDCW~e~~Rd~~grLva~~~rFP~-Gi~~ladyvHs~GLKlGiYsD~G 131 (414)
T KOG2366|consen 59 EQLFKEMADAMVSEGLADVGYEYINIDDCWSEVTRDSDGRLVADPSRFPS-GIKALADYVHSKGLKLGIYSDAG 131 (414)
T ss_pred HHHHHHHHHHHHHhHHHhcCcEEEechhhhhhhccCCccccccChhhccc-chhhhhhchhhcCCceeeeeccC
Confidence 44456777777664 466777888877887777775 57899997 57899999999999999988866
No 87
>PRK13840 sucrose phosphorylase; Provisional
Probab=34.48 E-value=5.6e+02 Score=31.09 Aligned_cols=128 Identities=12% Similarity=0.137 Sum_probs=71.5
Q ss_pred CHHHHHHHHHHHHHcCCCceEEEecCCCC------CCc--eee-eeCCCCCCChhHHHHHHHHHHcCCEEEEEeC-CCCc
Q 002256 334 NLSVVEDVVENYKKAKIPLDVIWNDDDHM------DGH--KDF-TLNPTNYPRPKLLAFLEKIHKIGMKYIVIID-PGIG 403 (946)
Q Consensus 334 ~~~~v~~vv~~~~~~~IPlD~iw~Didym------~~~--~~F-t~d~~~FP~p~l~~~v~~Lh~~g~k~v~iid-P~I~ 403 (946)
+...+.+.++.|-+ ++ ++.||+=.-+- .+| .|| .+|| +|-+ +.+ +++|- +|+|+|+=+= -|++
T Consensus 18 dL~gl~~kLd~yL~-~l-v~~vhllPff~psp~sD~GYdv~DY~~VDP-~fGt--~eD-f~~L~-~giklmlDlV~NHtS 90 (495)
T PRK13840 18 GLKSLTALLDGRLD-GL-FGGVHILPFFYPIDGADAGFDPIDHTKVDP-RLGD--WDD-VKALG-KTHDIMADLIVNHMS 90 (495)
T ss_pred CHhHHHHHHHHHHH-HH-hCeEEECCCccCCCCCCCCCCCcChhhcCc-ccCC--HHH-HHHHH-hCCeEEEEECCCcCC
Confidence 66777777775332 24 78888764431 111 222 2444 3443 223 23333 2888876433 3555
Q ss_pred cCCCcHHhHhcc-------cCcEEEeeC--------------------CcceE---------EEecCCcc---cccCCCC
Q 002256 404 VNSSYGVYQRGI-------ANDVFIKYE--------------------GEPYL---------AQVWPGAV---NFPDFLN 444 (946)
Q Consensus 404 ~~~~y~~y~~g~-------~~~~fik~~--------------------g~~~~---------g~~WpG~~---~~pDf~n 444 (946)
. ..+-|++.+ -.|+|+-.+ |.++. ..+|.... .-+||.|
T Consensus 91 ~--~h~WFqd~l~~~~~s~Y~D~fi~~d~~~~~~~~~~~~~~if~~~~g~~~~~~~~~~~~~~~~w~tF~~~QpDLN~~N 168 (495)
T PRK13840 91 A--ESPQFQDVLAKGEASEYWPMFLTKDKVFPDGATEEDLAGIYRPRPGLPFTTYTLADGKTRLVWTTFTPQQIDIDVHS 168 (495)
T ss_pred C--CcHHHHHHHHhCCCCCccCeEEECCCCCcCCCCCcccccccCCCCCCcccceEecCCCceEEeccCCcccceeCCCC
Confidence 3 345555543 246777411 22221 12443322 2257889
Q ss_pred HHHHHHHHHHHHHhhccCCccEEEEeC
Q 002256 445 PKTVSWWGDEIRRFHELVPVDGLWIDM 471 (946)
Q Consensus 445 p~a~~ww~~~~~~~~~~~g~dg~W~Dm 471 (946)
|++++...+.++.+.+ .|+|||=+|.
T Consensus 169 P~V~~~i~~il~fwl~-~GVDgfRLDA 194 (495)
T PRK13840 169 AAGWEYLMSILDRFAA-SHVTLIRLDA 194 (495)
T ss_pred HHHHHHHHHHHHHHHH-CCCCEEEEec
Confidence 9999999998877776 5999999996
No 88
>cd04934 ACT_AK-Hom3_1 CT domains located C-terminal to the catalytic domain of the aspartokinase (AK) HOM3, a monofunctional class enzyme found in Saccharomyces cerevisiae, and other related ACT domains. This CD includes the first of two ACT domains located C-terminal to the catalytic domain of the aspartokinase (AK) HOM3, a monofunctional class enzyme found in Saccharomyces cerevisiae, and other related ACT domains. AK is the first enzyme in the aspartate metabolic pathway, catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP, and in fungi, is responsible for the production of threonine, isoleucine and methionine. S. cerevisiae has a single AK, which is regulated by feedback, allosteric inhibition by L-threonine. Recent studies shown that the allosteric transition triggered by binding of threonine to AK involves a large change in the conformation of the native hexameric enzyme that is converted to an inactive one of different shape and substantially smaller hydro
Probab=32.91 E-value=1.2e+02 Score=26.56 Aligned_cols=51 Identities=18% Similarity=0.290 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHcCCCceEEEecCCCCCCceeeeeCCCCCCChhHHHHHHHHHHc
Q 002256 336 SVVEDVVENYKKAKIPLDVIWNDDDHMDGHKDFTLNPTNYPRPKLLAFLEKIHKI 390 (946)
Q Consensus 336 ~~v~~vv~~~~~~~IPlD~iw~Didym~~~~~Ft~d~~~FP~p~l~~~v~~Lh~~ 390 (946)
.-+.++.+.+.+++|++|.|-... ..-.|+.+...+.++.+.+++++|++-
T Consensus 16 g~~~~If~~la~~~I~vd~I~~s~----~~isftv~~~~~~~~~l~~l~~el~~~ 66 (73)
T cd04934 16 GFLARIFAILDKYRLSVDLISTSE----VHVSMALHMENAEDTNLDAAVKDLQKL 66 (73)
T ss_pred CHHHHHHHHHHHcCCcEEEEEeCC----CEEEEEEehhhcChHHHHHHHHHHHHh
Confidence 345678888999999999997633 446799998888665788999999983
No 89
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=29.51 E-value=6.1e+02 Score=28.71 Aligned_cols=124 Identities=16% Similarity=0.245 Sum_probs=76.0
Q ss_pred eccCCCCCHHHHHHHHHHHHHcCCCceEEEecCCC-----CCCceeeeeC---CCCCCChhHHHHHHHHHHcCCEEEEEe
Q 002256 327 QCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDH-----MDGHKDFTLN---PTNYPRPKLLAFLEKIHKIGMKYIVII 398 (946)
Q Consensus 327 q~r~gY~~~~~v~~vv~~~~~~~IPlD~iw~Didy-----m~~~~~Ft~d---~~~FP~p~l~~~v~~Lh~~g~k~v~ii 398 (946)
.+| +|.+.+.++++++.|...++-.=-+++-+|. .+.+-..|-. ...|...+++++++.-+++|+++|+=|
T Consensus 10 ~aR-~f~~~~~ik~~Id~ma~~KlN~lh~HltDd~~~rle~~~~P~lt~~g~~~~~yT~~di~elv~yA~~rgI~vIPEI 88 (311)
T cd06570 10 VSR-HFIPVAVIKRQLDAMASVKLNVFHWHLTDDQGFRIESKKYPKLQQKASDGLYYTQEQIREVVAYARDRGIRVVPEI 88 (311)
T ss_pred cCC-CCcCHHHHHHHHHHHHHhCCeEEEEEEecCCCceeecCCCccccccCCCCCccCHHHHHHHHHHHHHcCCEEEEee
Confidence 455 4567999999999999999987666653332 1122222210 123544578999999999999999998
Q ss_pred C-CCCccC--CCcHHhHhcccCcEEEeeCCcceE-EEecCCcccccCCCCHHHHHHHHHHHHHhhcc
Q 002256 399 D-PGIGVN--SSYGVYQRGIANDVFIKYEGEPYL-AQVWPGAVNFPDFLNPKTVSWWGDEIRRFHEL 461 (946)
Q Consensus 399 d-P~I~~~--~~y~~y~~g~~~~~fik~~g~~~~-g~~WpG~~~~pDf~np~a~~ww~~~~~~~~~~ 461 (946)
| |+=... ..|+-+.. . +.++. ...|.-....+|.+||++.++-.+.++++...
T Consensus 89 d~PGH~~a~~~~ypel~~--------~--~~~~~~~~~~~~~~~~l~~~~p~t~~f~~~l~~E~~~l 145 (311)
T cd06570 89 DVPGHASAIAVAYPELAS--------G--PGPYVIERGWGVFEPLLDPTNEETYTFLDNLFGEMAEL 145 (311)
T ss_pred cCccchHHHHHhCHHhcc--------C--CCccccccccccCCCccCCCChhHHHHHHHHHHHHHHh
Confidence 8 652211 12332211 1 11110 11222223357999999999999888887654
No 90
>PF00728 Glyco_hydro_20: Glycosyl hydrolase family 20, catalytic domain; InterPro: IPR015883 Glycoside hydrolase family 20 GH20 from CAZY comprises enzymes with several known activities; beta-hexosaminidase (3.2.1.52 from EC); lacto-N-biosidase (3.2.1.140 from EC). Carbonyl oxygen of the C-2 acetamido group of the substrate acts as the catalytic nucleophile/base in this family of enzymes. In the brain and other tissues, beta-hexosaminidase A degrades GM2 gangliosides; specifically, the enzyme hydrolyses terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides. There are 3 forms of beta-hexosaminidase: hexosaminidase A is a trimer, with one alpha, one beta-A and one beta-B chain; hexosaminidase B is a tetramer of two beta-A and two beta-B chains; and hexosaminidase S is a homodimer of alpha chains. The two beta chains are derived from the cleavage of a precursor. Mutations in the beta-chain lead to Sandhoff disease, a lysosomal storage disorder characterised by accumulation of GM2 ganglioside [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 3RPM_A 1C7T_A 1QBA_A 1QBB_A 1C7S_A 3RCN_A 2YL8_A 2YL6_A 2YLL_A 2YL5_C ....
Probab=29.39 E-value=1.4e+02 Score=33.93 Aligned_cols=141 Identities=16% Similarity=0.234 Sum_probs=79.3
Q ss_pred eccCCCCCHHHHHHHHHHHHHcCCCceEEEecCCCC-----CCce----eeeeCCC----CCCChhHHHHHHHHHHcCCE
Q 002256 327 QCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDHM-----DGHK----DFTLNPT----NYPRPKLLAFLEKIHKIGMK 393 (946)
Q Consensus 327 q~r~gY~~~~~v~~vv~~~~~~~IPlD~iw~Didym-----~~~~----~Ft~d~~----~FP~p~l~~~v~~Lh~~g~k 393 (946)
.+| .|.+.+.++++++.|...++-.=-+++-.+.. ..+. ...+... .|-..+++++|+.-+++|++
T Consensus 10 ~aR-~~~~~~~ik~~id~ma~~k~N~lhlhl~D~~~~~~~~~~~p~l~~~ga~~~~~~~~~yT~~di~~lv~yA~~~gI~ 88 (351)
T PF00728_consen 10 VAR-HFFSVDTIKRLIDQMAYYKLNVLHLHLSDDQGFRLESKSYPELTEKGAYRPSDAGGYYTKEDIRELVAYAKERGIE 88 (351)
T ss_dssp TSS-S-B-HHHHHHHHHHHHHTT-SEEEEEEESSTCB-BEBSTSTHHHHTTTESTTCTESEBEHHHHHHHHHHHHHTT-E
T ss_pred cCC-CCCCHHHHHHHHHHHHHcCCcEEEEEEecCCCCccccCCCccccccCccccccccccCCHHHHHHHHHHHHHcCCc
Confidence 567 78899999999999999999876666644411 1111 1111111 34456789999999999999
Q ss_pred EEEEeC-CCCccC--CCcHHhHhcccCcEEEeeCCcceEEEecCCcccccCCCCHHHHHHHHHHHHHhhccCCccEEEEe
Q 002256 394 YIVIID-PGIGVN--SSYGVYQRGIANDVFIKYEGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHELVPVDGLWID 470 (946)
Q Consensus 394 ~v~iid-P~I~~~--~~y~~y~~g~~~~~fik~~g~~~~g~~WpG~~~~pDf~np~a~~ww~~~~~~~~~~~g~dg~W~D 470 (946)
+|+-|| |+=... ..|+.+... . ...+.......++.....-.|.++|++.++-.+.++++.+..+-..|=+=
T Consensus 89 VIPeid~PGH~~~~l~~~p~~~~~---~--~~~~~~~~~~~~~~~~~~~l~~~~~~t~~~~~~l~~e~~~~f~~~~iHiG 163 (351)
T PF00728_consen 89 VIPEIDTPGHAEAWLKAYPELGCS---A--WPEDKSWPNSTCWYPDNGVLDPSNPETYEFLKDLLDEVADLFPSKYIHIG 163 (351)
T ss_dssp EEEEEEESSS-HHHHHHHHHHCCC---H--TTCSSSCEEEETTSEEEEEE-TTSHHHHHHHHHHHHHHHHHHTSSEEEEE
T ss_pred eeeeccCchHHHHHHHhCchhhcc---c--cccccccccccccCCCcccCCCCcHHHHHHHHHHHHHHHhhCCCCeEEeC
Confidence 999988 642211 112222111 0 00011111223333344567999999999999998887765444444343
Q ss_pred CCC
Q 002256 471 MNE 473 (946)
Q Consensus 471 mnE 473 (946)
+-|
T Consensus 164 gDE 166 (351)
T PF00728_consen 164 GDE 166 (351)
T ss_dssp -TS
T ss_pred Ccc
Confidence 334
No 91
>cd06565 GH20_GcnA-like Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins. GcnA is an exoglucosidase which cleaves N-acetyl-beta-D-galactosamine (NAG) and N-acetyl-beta-D-galactosamine residues from 4-methylumbelliferylated (4MU) substrates, as well as cleaving NAG from chito-oligosaccharides (i.e. NAG polymers). In contrast, sulfated forms of the substrate are unable to be cleaved and act instead as mild competitive inhibitors. Additionally, the enzyme is known to be poisoned by several first-row transition metals as well as by mercury. GcnA forms a homodimer with subunits comprised of three domains, an N-terminal zincin-like domain, this central catalytic GH20 domain, and a C-terminal alpha helical domain. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=29.14 E-value=8e+02 Score=27.49 Aligned_cols=132 Identities=16% Similarity=0.164 Sum_probs=81.9
Q ss_pred eccCCCCCHHHHHHHHHHHHHcCCCceEEEecCCC-CCCceeeeeCCCCCCChhHHHHHHHHHHcCCEEEEEeC-CCCcc
Q 002256 327 QCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDH-MDGHKDFTLNPTNYPRPKLLAFLEKIHKIGMKYIVIID-PGIGV 404 (946)
Q Consensus 327 q~r~gY~~~~~v~~vv~~~~~~~IPlD~iw~Didy-m~~~~~Ft~d~~~FP~p~l~~~v~~Lh~~g~k~v~iid-P~I~~ 404 (946)
.+|-.+.+.+.++++++.+...++-.=-+++...+ ..+...+.-++..|-..+++++++.-+++|+.+|+-|| ||=.
T Consensus 8 ~~R~~~~~~~~lk~~id~ma~~k~N~l~lhl~D~f~~~~~p~~~~~~~~yT~~ei~ei~~yA~~~gI~vIPeid~pGH~- 86 (301)
T cd06565 8 LKRNAVPKVSYLKKLLRLLALLGANGLLLYYEDTFPYEGEPEVGRMRGAYTKEEIREIDDYAAELGIEVIPLIQTLGHL- 86 (301)
T ss_pred cCCCCCCCHHHHHHHHHHHHHcCCCEEEEEEecceecCCCcccccCCCCcCHHHHHHHHHHHHHcCCEEEecCCCHHHH-
Confidence 56657778999999999999999876555554322 12333333345667777899999999999999999887 3211
Q ss_pred CCCcHHhHhcccCcEEEeeCCcceEEEecCCcccccCCCCHHHHHHHHHHHHHhhccCCccEEEEeCCC
Q 002256 405 NSSYGVYQRGIANDVFIKYEGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHELVPVDGLWIDMNE 473 (946)
Q Consensus 405 ~~~y~~y~~g~~~~~fik~~g~~~~g~~WpG~~~~pDf~np~a~~ww~~~~~~~~~~~g~dg~W~DmnE 473 (946)
....+..-|... ..++......|..+|++.++-.+.++++.+..+-..+=+=+-|
T Consensus 87 -------~~~l~~~~~~~l-------~~~~~~~~~l~~~~~~t~~fi~~li~ev~~~f~s~~~HIG~DE 141 (301)
T cd06565 87 -------EFILKHPEFRHL-------REVDDPPQTLCPGEPKTYDFIEEMIRQVLELHPSKYIHIGMDE 141 (301)
T ss_pred -------HHHHhCcccccc-------cccCCCCCccCCCChhHHHHHHHHHHHHHHhCCCCeEEECCCc
Confidence 000000001110 0012223457889999999999999887765443333333334
No 92
>cd04883 ACT_AcuB C-terminal ACT domain of the Bacillus subtilis acetoin utilization protein, AcuB. This CD includes the C-terminal ACT domain of the Bacillus subtilis acetoin utilization protein, AcuB. AcuB is putatively involved in the anaerobic catabolism of acetoin, and related proteins. Studies report the induction of AcuB by nitrate respiration and also by fermentation. Since acetoin can be secreted and later serve as a source of carbon, it has been proposed that, during anaerobic growth when other carbon sources are exhausted, the induction of the AcuB protein results in acetoin catabolism. AcuB-like proteins have two N-terminal tandem CBS domains and a single C-terminal ACT domain. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=27.40 E-value=2.2e+02 Score=23.83 Aligned_cols=57 Identities=11% Similarity=0.278 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHcCCCceEEEecCCCCCCceeeeeCCCCCCChhHHHHHHHHHHcCCEEE
Q 002256 336 SVVEDVVENYKKAKIPLDVIWNDDDHMDGHKDFTLNPTNYPRPKLLAFLEKIHKIGMKYI 395 (946)
Q Consensus 336 ~~v~~vv~~~~~~~IPlD~iw~Didym~~~~~Ft~d~~~FP~p~l~~~v~~Lh~~g~k~v 395 (946)
-.+.++.+-+.++++-++.+.....-..+.....+.-+. ++++ +.++.|.++|+++.
T Consensus 13 G~l~~i~~~l~~~~inI~~i~~~~~~~~~~~~v~i~v~~-~~~~--~~~~~L~~~G~~v~ 69 (72)
T cd04883 13 GQLADIAAIFKDRGVNIVSVLVYPSKEEDNKILVFRVQT-MNPR--PIIEDLRRAGYEVL 69 (72)
T ss_pred CHHHHHHHHHHHcCCCEEEEEEeccCCCCeEEEEEEEec-CCHH--HHHHHHHHCCCeee
Confidence 357788889999999999887643323344433333222 3344 88999999998763
No 93
>PF01373 Glyco_hydro_14: Glycosyl hydrolase family 14; InterPro: IPR001554 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 14 GH14 from CAZY comprises enzymes with only one known activity; beta-amylase (3.2.1.2 from EC). A Glu residue has been proposed as a catalytic residue, but it is not known if it is the nucleophile or the proton donor. Beta-amylase [, ] is an enzyme that hydrolyses 1,4-alpha-glucosidic linkages in starch-type polysaccharide substrates so as to remove successive maltose units from the non-reducing ends of the chains. Beta-amylase is present in certain bacteria as well as in plants. Three highly conserved sequence regions are found in all known beta-amylases. The first of these regions is located in the N-terminal section of the enzymes and contains an aspartate which is known [] to be involved in the catalytic mechanism. The second, located in a more central location, is centred around a glutamate which is also involved [] in the catalytic mechanism. The 3D structure of a complex of soybean beta-amylase with an inhibitor (alpha-cyclodextrin) has been determined to 3.0A resolution by X-ray diffraction []. The enzyme folds into large and small domains: the large domain has a (beta alpha)8 super-secondary structural core, while the smaller is formed from two long loops extending from the beta-3 and beta-4 strands of the (beta alpha)8 fold []. The interface of the two domains, together with shorter loops from the (beta alpha)8 core, form a deep cleft, in which the inhibitor binds []. Two maltose molecules also bind in the cleft, one sharing a binding site with alpha-cyclodextrin, and the other sitting more deeply in the cleft [].; GO: 0016161 beta-amylase activity, 0000272 polysaccharide catabolic process; PDB: 1FA2_A 2DQX_A 1WDP_A 1UKP_C 1BYC_A 1BYA_A 1Q6C_A 1V3I_A 1BTC_A 1BYB_A ....
Probab=26.86 E-value=2e+02 Score=33.81 Aligned_cols=92 Identities=24% Similarity=0.380 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHcCCCceEEEecCCCC--CCceeeeeCCCCCCChhHHHHHHHHHHcCCEEEEEeCC-----------CC
Q 002256 336 SVVEDVVENYKKAKIPLDVIWNDDDHM--DGHKDFTLNPTNYPRPKLLAFLEKIHKIGMKYIVIIDP-----------GI 402 (946)
Q Consensus 336 ~~v~~vv~~~~~~~IPlD~iw~Didym--~~~~~Ft~d~~~FP~p~l~~~v~~Lh~~g~k~v~iidP-----------~I 402 (946)
..++.-++.++++| +|.|-+|+.|- ++.. |.+|.-...+++++-+++.|.|+.+++.= .|
T Consensus 16 ~~~~~~L~~LK~~G--V~GVmvdvWWGiVE~~~-----p~~ydWs~Y~~l~~~vr~~GLk~~~vmsfH~cGgNvgD~~~I 88 (402)
T PF01373_consen 16 NALEAQLRALKSAG--VDGVMVDVWWGIVEGEG-----PQQYDWSGYRELFEMVRDAGLKLQVVMSFHQCGGNVGDDCNI 88 (402)
T ss_dssp HHHHHHHHHHHHTT--EEEEEEEEEHHHHTGSS-----TTB---HHHHHHHHHHHHTT-EEEEEEE-S-BSSSTTSSSEB
T ss_pred HHHHHHHHHHHHcC--CcEEEEEeEeeeeccCC-----CCccCcHHHHHHHHHHHHcCCeEEEEEeeecCCCCCCCccCC
Confidence 36777778888766 78888887763 2221 22332234668999999999999999832 23
Q ss_pred ccCCCcHHhHhcccCcEEEe-eCCc---ceEEEecCCc
Q 002256 403 GVNSSYGVYQRGIANDVFIK-YEGE---PYLAQVWPGA 436 (946)
Q Consensus 403 ~~~~~y~~y~~g~~~~~fik-~~g~---~~~g~~WpG~ 436 (946)
.. + --+.+.+.+.|+|.+ +.|. .++..++.|.
T Consensus 89 pL-P-~Wv~~~~~~~di~ytd~~G~rn~E~lSp~~~gr 124 (402)
T PF01373_consen 89 PL-P-SWVWEIGKKDDIFYTDRSGNRNKEYLSPVLDGR 124 (402)
T ss_dssp -S---HHHHHHHHHSGGEEE-TTS-EEEEEE-CTBTTB
T ss_pred cC-C-HHHHhccccCCcEEECCCCCcCcceeecccCCc
Confidence 32 1 235666777799887 4553 4555444444
No 94
>PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 35 GH35 from CAZY comprises enzymes with only one known activity; beta-galactosidase (3.2.1.23 from EC). Mammalian beta-galactosidase is a lysosomal enzyme (gene GLB1) which cleaves the terminal galactose from gangliosides, glycoproteins, and glycosaminoglycans and whose deficiency is the cause of the genetic disease Gm(1) gangliosidosis (Morquio disease type B).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3OGS_A 3OGV_A 3OGR_A 3OG2_A 1TG7_A 1XC6_A 3THC_C 3THD_D 3D3A_A 4E8D_B ....
Probab=26.42 E-value=1e+02 Score=34.90 Aligned_cols=74 Identities=19% Similarity=0.187 Sum_probs=45.2
Q ss_pred ceeccCCCCCHHHHHHHHHHHHHcCCCceEEEecCCCCCC-ceeeeeCCCCCCChhHHHHHHHHHHcCCEEEEEeCCCCc
Q 002256 325 FHQCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDHMDG-HKDFTLNPTNYPRPKLLAFLEKIHKIGMKYIVIIDPGIG 403 (946)
Q Consensus 325 ~hq~r~gY~~~~~v~~vv~~~~~~~IPlD~iw~Didym~~-~~~Ft~d~~~FP~p~l~~~v~~Lh~~g~k~v~iidP~I~ 403 (946)
+|-+|.- .+..+++++++++.|+-+=.+++-..+++. .+.|.|.. .-++..|++.-+++|+++++..-|.|.
T Consensus 16 ~hy~r~p---~~~W~~~l~k~ka~G~n~v~~yv~W~~he~~~g~~df~g----~~dl~~f~~~a~~~gl~vilrpGpyi~ 88 (319)
T PF01301_consen 16 FHYFRIP---PEYWRDRLQKMKAAGLNTVSTYVPWNLHEPEEGQFDFTG----NRDLDRFLDLAQENGLYVILRPGPYIC 88 (319)
T ss_dssp E-GGGS----GGGHHHHHHHHHHTT-SEEEEE--HHHHSSBTTB---SG----GG-HHHHHHHHHHTT-EEEEEEES---
T ss_pred eccccCC---hhHHHHHHHHHHhCCcceEEEeccccccCCCCCcccccc----hhhHHHHHHHHHHcCcEEEecccceec
Confidence 4555553 677889999999999988777655443322 23343332 135889999999999999999999998
Q ss_pred cC
Q 002256 404 VN 405 (946)
Q Consensus 404 ~~ 405 (946)
.+
T Consensus 89 aE 90 (319)
T PF01301_consen 89 AE 90 (319)
T ss_dssp TT
T ss_pred cc
Confidence 76
No 95
>PF07611 DUF1574: Protein of unknown function (DUF1574); InterPro: IPR011468 This is a family of hypothetical proteins found in Leptospira interrogans and other bacteria.
Probab=25.86 E-value=86 Score=36.03 Aligned_cols=74 Identities=22% Similarity=0.327 Sum_probs=48.6
Q ss_pred ceeeeeCCCCCCChhHHHHHHHHHHcCCEEEEEeCCCCccCCCcHHhHhcccCcEEEeeCCcceEEEecCCcccccCCCC
Q 002256 365 HKDFTLNPTNYPRPKLLAFLEKIHKIGMKYIVIIDPGIGVNSSYGVYQRGIANDVFIKYEGEPYLAQVWPGAVNFPDFLN 444 (946)
Q Consensus 365 ~~~Ft~d~~~FP~p~l~~~v~~Lh~~g~k~v~iidP~I~~~~~y~~y~~g~~~~~fik~~g~~~~g~~WpG~~~~pDf~n 444 (946)
++.||.++..+.- +.++++.++++|+++++| .|.|+ ++|.+-.+..
T Consensus 241 l~~f~~s~~q~~F--~e~~L~~ake~~I~~vl~-~P~V~-----~~~~~~~~~~-------------------------- 286 (345)
T PF07611_consen 241 LSSFTFSETQFFF--LEKFLKLAKENGIPVVLW-WPKVS-----PPYEKLYKEL-------------------------- 286 (345)
T ss_pred hcCCCCChhHHHH--HHHHHHHHHHcCCcEEEE-EeccC-----HHHHHHHHhh--------------------------
Confidence 4678888887753 569999999999999885 56554 3444322111
Q ss_pred HHHHHHHHHHHHHhhccCCccEEEEeCCCCc
Q 002256 445 PKTVSWWGDEIRRFHELVPVDGLWIDMNEAS 475 (946)
Q Consensus 445 p~a~~ww~~~~~~~~~~~g~dg~W~DmnEps 475 (946)
+..+=|...++++++..++ -++||||..
T Consensus 287 -~~~~~w~~~i~~l~~~~~~--~~~dmn~d~ 314 (345)
T PF07611_consen 287 -KVYESWWPIIKKLAKEYGI--PFLDMNEDP 314 (345)
T ss_pred -chhhHHHHHHHHHHhcCCc--eEecccCCC
Confidence 0123345667888776554 589999954
No 96
>COG0826 Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]
Probab=25.68 E-value=2.4e+02 Score=32.51 Aligned_cols=99 Identities=16% Similarity=0.198 Sum_probs=56.8
Q ss_pred ceEEEecCCCCCCceeeeeCCCCCCChhHHHHHHHHHHcCCEEEEEeCCCCccCCCc---HHhHhcccCc--EEEeeC-C
Q 002256 352 LDVIWNDDDHMDGHKDFTLNPTNYPRPKLLAFLEKIHKIGMKYIVIIDPGIGVNSSY---GVYQRGIAND--VFIKYE-G 425 (946)
Q Consensus 352 lD~iw~Didym~~~~~Ft~d~~~FP~p~l~~~v~~Lh~~g~k~v~iidP~I~~~~~y---~~y~~g~~~~--~fik~~-g 425 (946)
.|++++--. .-+-+.+ ..+|+..+|++.++.+|+.|.|+.+.++..+..+.-. ...++..+.| .+|-.| |
T Consensus 27 ADaVY~G~~-~~~~R~~---a~nfs~~~l~e~i~~ah~~gkk~~V~~N~~~~~~~~~~~~~~l~~l~e~GvDaviv~Dpg 102 (347)
T COG0826 27 ADAVYIGEK-EFGLRRR---ALNFSVEDLAEAVELAHSAGKKVYVAVNTLLHNDELETLERYLDRLVELGVDAVIVADPG 102 (347)
T ss_pred CCEEEeCCc-ccccccc---cccCCHHHHHHHHHHHHHcCCeEEEEeccccccchhhHHHHHHHHHHHcCCCEEEEcCHH
Confidence 999987533 1111112 1468888999999999999999999998877654211 1223333333 233222 1
Q ss_pred cc-eEEEecCC----cccccCCCCHHHHHHHHHH
Q 002256 426 EP-YLAQVWPG----AVNFPDFLNPKTVSWWGDE 454 (946)
Q Consensus 426 ~~-~~g~~WpG----~~~~pDf~np~a~~ww~~~ 454 (946)
-. +..+..|. .+..-.-+|+++.+||.++
T Consensus 103 ~i~l~~e~~p~l~ih~S~q~~v~N~~~~~f~~~~ 136 (347)
T COG0826 103 LIMLARERGPDLPIHVSTQANVTNAETAKFWKEL 136 (347)
T ss_pred HHHHHHHhCCCCcEEEeeeEecCCHHHHHHHHHc
Confidence 00 01111121 1233456899999999873
No 97
>cd06564 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 (GH20) catalytic domain of dispersin B (DspB), lacto-N-biosidase (LnbB) and related proteins. Dispersin B is a soluble beta-N-acetylglucosamidase found in bacteria that hydrolyzes the beta-1,6-linkages of PGA (poly-beta-(1,6)-N-acetylglucosamine), a major component of the extracellular polysaccharide matrix. Lacto-N-biosidase hydrolyzes lacto-N-biose (LNB) type I oligosaccharides at the nonreducing terminus to produce lacto-N-biose as part of the GNB/LNB (galacto-N-biose/lacto-N-biose I) degradation pathway. The lacto-N-biosidase from Bifidobacterium bifidum has this GH20 domain, a carbohydrate binding module 32, and a bacterial immunoglobulin-like domain 2, as well as a YSIRK signal peptide and a G5 membrane anchor at the N and C termini, respectively. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=24.93 E-value=3.9e+02 Score=30.28 Aligned_cols=119 Identities=16% Similarity=0.198 Sum_probs=73.4
Q ss_pred ccCCCCCHHHHHHHHHHHHHcCCCceEEEecCCCCCCceee-----------------------eeCCCCCCChhHHHHH
Q 002256 328 CRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDHMDGHKDF-----------------------TLNPTNYPRPKLLAFL 384 (946)
Q Consensus 328 ~r~gY~~~~~v~~vv~~~~~~~IPlD~iw~Didym~~~~~F-----------------------t~d~~~FP~p~l~~~v 384 (946)
+|- |.+.+.++++++.|...++-.=-+++-..|--.-..+ .-....|...++++++
T Consensus 10 aR~-~~~~~~ik~~id~ma~~K~N~lhlHltD~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~YT~~di~eiv 88 (326)
T cd06564 10 GRK-YYSMDFLKDIIKTMSWYKMNDLQLHLNDNLIFNLDDMSTTVNNATYASDDVKSGNNYYNLTANDGYYTKEEFKELI 88 (326)
T ss_pred cCC-CCCHHHHHHHHHHHHHcCCceEEEeecCCcccccCCCchhhhhhhhhccccccccccCCCCCCCCcccHHHHHHHH
Confidence 443 4589999999999999988775555543321100000 1123345666789999
Q ss_pred HHHHHcCCEEEEEeC-CCCccC--CCcHHhHhcccCcEEEeeCCcceEEEecCCcccccCCCCHHHHHHHHHHHHHhhcc
Q 002256 385 EKIHKIGMKYIVIID-PGIGVN--SSYGVYQRGIANDVFIKYEGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHEL 461 (946)
Q Consensus 385 ~~Lh~~g~k~v~iid-P~I~~~--~~y~~y~~g~~~~~fik~~g~~~~g~~WpG~~~~pDf~np~a~~ww~~~~~~~~~~ 461 (946)
+.-+++|+.+|+-|| |+=... ..|+.+. ..+ + ..| +...-+|.++|++.++-.+.++++.+.
T Consensus 89 ~yA~~rgI~vIPEID~PGH~~a~~~~~pel~---~~~-----~------~~~-~~~~~l~~~~~~t~~f~~~l~~E~~~~ 153 (326)
T cd06564 89 AYAKDRGVNIIPEIDSPGHSLAFTKAMPELG---LKN-----P------FSK-YDKDTLDISNPEAVKFVKALFDEYLDG 153 (326)
T ss_pred HHHHHcCCeEeccCCCcHHHHHHHHhhHHhc---CCC-----c------ccC-CCcccccCCCHHHHHHHHHHHHHHHHh
Confidence 999999999999888 542210 1122110 000 0 112 233456999999999999988887664
Q ss_pred C
Q 002256 462 V 462 (946)
Q Consensus 462 ~ 462 (946)
.
T Consensus 154 f 154 (326)
T cd06564 154 F 154 (326)
T ss_pred c
Confidence 3
No 98
>PF12138 Spherulin4: Spherulation-specific family 4; InterPro: IPR021986 This protein is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 250 and 398 amino acids in length. There is a conserved NPG sequence motif and there are two completely conserved G residues that may be functionally important. Starvation will often induce spherulation - the production of spores - and this process may involve DNA-methylation. Changes in the methylation of spherulin4 are associated with the formation of spherules, but these changes are probably transient. Methylation of the gene accompanies its transcriptional activation, and spherulin4 mRNA is only detectable in late spherulating cultures and mature spherules. It is a spherulation-specific protein.
Probab=24.28 E-value=1.3e+02 Score=33.05 Aligned_cols=101 Identities=22% Similarity=0.382 Sum_probs=68.2
Q ss_pred hHHHHHHHHhhcCCCCCCCcccccceeccCCCCCHHHHHHHHHHHHHc-------CCCceEEEecCCCCCCceeeeeCCC
Q 002256 301 PLAVVDQYTAFIGRPAPMPYWSLGFHQCRWGYHNLSVVEDVVENYKKA-------KIPLDVIWNDDDHMDGHKDFTLNPT 373 (946)
Q Consensus 301 p~~vi~qY~~ltG~p~lpP~WalG~hq~r~gY~~~~~v~~vv~~~~~~-------~IPlD~iw~Didym~~~~~Ft~d~~ 373 (946)
..+.+++..+.-| .=.|||-.+.||-++.++|++-+++|.+- ++.+|.|++|----+. +
T Consensus 55 Y~~~i~~L~~~~n------v~vlGYV~T~Yg~R~~~~V~~dI~~Y~~W~~~~~~~~~~vdGIFfDE~p~~~--------~ 120 (253)
T PF12138_consen 55 YAAAIPRLNSYAN------VRVLGYVHTSYGSRPLSEVKADIDTYASWYGQSEDYGYRVDGIFFDEAPNDY--------A 120 (253)
T ss_pred HHHHHHHHHhcCC------CcEEEEEEccccCCCHHHHHHHHHHHhhccccccCCCcccceEEEecCCCcH--------H
Confidence 3455555554444 44689999999999999999999999886 6999999998421110 1
Q ss_pred CCCChhHHHHHHHHHH---cCCEEEEEeCCCCccC-CCcHHhHhcccCcEEEe
Q 002256 374 NYPRPKLLAFLEKIHK---IGMKYIVIIDPGIGVN-SSYGVYQRGIANDVFIK 422 (946)
Q Consensus 374 ~FP~p~l~~~v~~Lh~---~g~k~v~iidP~I~~~-~~y~~y~~g~~~~~fik 422 (946)
+. +-++.+.+.+|+ .+-.-.++.+||.... +.|... .|+.|-
T Consensus 121 ~~--~y~~~l~~~vk~~~~~~~~~~VV~NPGt~~p~~~y~~~-----aD~~V~ 166 (253)
T PF12138_consen 121 NL--PYYQNLYNYVKSAFGLGGDGLVVLNPGTAVPDPGYASI-----ADVVVV 166 (253)
T ss_pred HH--HHHHHHHHHHHhccccCCCCEEEeCCCCCCCcchhhcc-----cCEEEE
Confidence 11 125677777777 5566777899998553 444332 566654
No 99
>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is the 97th family of glycosidases, in this case bacterial. The central part of the GH97 family protein sequences represents a typical and complete (beta/alpha)8-barrel or catalytic TIM-barrel type domain. The N- and C-terminal parts of the sequences, mainly consisting of beta-strands, most probably form two additional non-catalytic domains with as yet unknown functions. The non-catalytic domains of glycosidases from the alpha-galactosidase and alpha-glucosidase superfamilies are also predominantly composed of beta-strands, and at least some of these domains are involved in oligomerisation and carbohydrate binding. In all known glycosidases with the (beta-alpha)8-barrel fold, the amino acid residues at the active site are located on the C-termini of the beta-strands []. ; PDB: 2JKP_A 2JKE_A 2D73_B 2ZQ0_B 2JKA_A 3A24_A.
Probab=23.54 E-value=1.9e+02 Score=32.29 Aligned_cols=66 Identities=11% Similarity=0.093 Sum_probs=43.4
Q ss_pred CHHHHHHHHHHHHHcCCCceEEEecCCCCCCceeeeeCC-CCCCChhHHHHHHHHHHcCCEEEEEeCCC
Q 002256 334 NLSVVEDVVENYKKAKIPLDVIWNDDDHMDGHKDFTLNP-TNYPRPKLLAFLEKIHKIGMKYIVIIDPG 401 (946)
Q Consensus 334 ~~~~v~~vv~~~~~~~IPlD~iw~Didym~~~~~Ft~d~-~~FP~p~l~~~v~~Lh~~g~k~v~iidP~ 401 (946)
+.+..++.++-..++||+.=.| |.+|-....+-++|. +..|+.+|+++++.=+++|+.+.+|.+=.
T Consensus 30 ~t~~~k~yIDfAa~~G~eYvlv--D~GW~~~~~~~~~d~~~~~~~~dl~elv~Ya~~KgVgi~lw~~~~ 96 (273)
T PF10566_consen 30 TTETQKRYIDFAAEMGIEYVLV--DAGWYGWEKDDDFDFTKPIPDFDLPELVDYAKEKGVGIWLWYHSE 96 (273)
T ss_dssp SHHHHHHHHHHHHHTT-SEEEE--BTTCCGS--TTT--TT-B-TT--HHHHHHHHHHTT-EEEEEEECC
T ss_pred CHHHHHHHHHHHHHcCCCEEEe--ccccccccccccccccccCCccCHHHHHHHHHHcCCCEEEEEeCC
Confidence 6788889999999999998554 888753211112221 34566789999999999999999998743
No 100
>smart00557 IG_FLMN Filamin-type immunoglobulin domains. These form a rod-like structure in the actin-binding cytoskeleton protein, filamin. The C-terminal repeats of filamin bind beta1-integrin (CD29).
Probab=21.42 E-value=2.7e+02 Score=25.29 Aligned_cols=32 Identities=19% Similarity=0.341 Sum_probs=22.0
Q ss_pred ceeEEEEEEEecCEEEEEEEeCCCCceecCcc
Q 002256 89 PLLQLYVKHETEDRLRVHITDAQKQRWEVPYN 120 (946)
Q Consensus 89 ~~L~l~v~~~~~~~lrvkI~d~~~~r~evP~~ 120 (946)
..|++.|.-.+...+.++|.|..+..|.+.+.
T Consensus 32 ~~~~v~i~~p~g~~~~~~v~d~~dGty~v~y~ 63 (93)
T smart00557 32 GELEVEVTGPSGKKVPVEVKDNGDGTYTVSYT 63 (93)
T ss_pred CcEEEEEECCCCCeeEeEEEeCCCCEEEEEEE
Confidence 34566665555557888888888788887653
No 101
>PF03537 Glyco_hydro_114: Glycoside-hydrolase family GH114; InterPro: IPR004352 Eighty-one archaeal-like genes, ranging in size from 4-20kb, are clustered in 15 regions of the Thermotoga maritima genome []. Conservation of gene order between T. maritima and Archaea in many of these regions suggests that lateral gene transfer may have occurred between thermophilic Eubacteria and Archaea []. One of the T. maritima sequences (hypothetical protein TM1410) shares similarity with Methanocaldococcus jannaschii (Methanococcus jannaschii) hypothetical protein MJ1477 and with hypothetical protein DR0705 from Deinococcus radiodurans. The sequences are characterised by relatively variable N- and C-terminal domains, and a more conserved central domain. They share no similarity with any other known, functionally or structurally characterised proteins. ; PDB: 2AAM_F.
Probab=21.25 E-value=1.2e+02 Score=26.83 Aligned_cols=20 Identities=20% Similarity=0.315 Sum_probs=16.9
Q ss_pred HHHHHHHHcCCEEEEEeCCC
Q 002256 382 AFLEKIHKIGMKYIVIIDPG 401 (946)
Q Consensus 382 ~~v~~Lh~~g~k~v~iidP~ 401 (946)
+-|+.||++|.+++..++-|
T Consensus 40 ~~I~~L~~~G~~vicY~s~G 59 (74)
T PF03537_consen 40 EEIARLKAQGKKVICYFSIG 59 (74)
T ss_dssp HHHHHHHHTT-EEEEEEESS
T ss_pred HHHHHHHHCCCEEEEEEeCc
Confidence 78999999999999988765
No 102
>PF11308 GHL1-3: Glycosyl hydrolases related to GH101 family, GHL1-GHL3; InterPro: IPR021459 Some members in this family of proteins with unknown function are annotated as lipoproteins however this cannot be confirmed. Currently no function is known.
Probab=21.10 E-value=2.2e+02 Score=32.32 Aligned_cols=54 Identities=13% Similarity=0.327 Sum_probs=36.9
Q ss_pred cccCcEEEe-eCCcceEEEecCCcc---cccCCCCHHHHHHHHHHHHHhhccCCccEEEEeC
Q 002256 414 GIANDVFIK-YEGEPYLAQVWPGAV---NFPDFLNPKTVSWWGDEIRRFHELVPVDGLWIDM 471 (946)
Q Consensus 414 g~~~~~fik-~~g~~~~g~~WpG~~---~~pDf~np~a~~ww~~~~~~~~~~~g~dg~W~Dm 471 (946)
+...+.-|. .||++..+.-|.|.. +.|-+. ...+.+.+.++.+..+++|+-+|-
T Consensus 70 ~~~~~~~v~~~dGt~~~gf~w~~g~~~~~~p~~~----~~~v~~r~~~i~~~~~~ns~FlDv 127 (307)
T PF11308_consen 70 GLYEDAAVRNADGTKKEGFRWGGGRYLNVCPTCA----LPYVKRRVEEILKGIGFNSWFLDV 127 (307)
T ss_pred cccccceeecCCCCCccceecCCcceeccCcccc----cHHHHHHHHHHHHhCCCCeEEEec
Confidence 334444444 689998888888653 225444 345667777777788999999995
No 103
>PTZ00445 p36-lilke protein; Provisional
Probab=20.72 E-value=2.6e+02 Score=30.02 Aligned_cols=62 Identities=16% Similarity=0.172 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHcCCCceEEEecCCC------CCCceeeeeCCC---CCCChhHHHHHHHHHHcCCEEEEEe
Q 002256 335 LSVVEDVVENYKKAKIPLDVIWNDDDH------MDGHKDFTLNPT---NYPRPKLLAFLEKIHKIGMKYIVII 398 (946)
Q Consensus 335 ~~~v~~vv~~~~~~~IPlD~iw~Didy------m~~~~~Ft~d~~---~FP~p~l~~~v~~Lh~~g~k~v~ii 398 (946)
.+.....++.+++.||-+ |-+|.|- ..+|.+.+-|.. .-..|+++.++++|++.|+++++..
T Consensus 28 ~~~~~~~v~~L~~~GIk~--Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v~VVT 98 (219)
T PTZ00445 28 HESADKFVDLLNECGIKV--IASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIKISVVT 98 (219)
T ss_pred HHHHHHHHHHHHHcCCeE--EEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCeEEEEE
Confidence 344667889999999865 6677663 234443331111 1245778999999999999998865
No 104
>smart00632 Aamy_C Aamy_C domain.
Probab=20.25 E-value=4.1e+02 Score=23.47 Aligned_cols=61 Identities=16% Similarity=0.293 Sum_probs=34.1
Q ss_pred eeeecC--ceeeeccccCCCeeEEE--EcCCCeeeeeccC---ceeEEcc-CCeEEEEeeCCce-eeEEEe
Q 002256 719 QFLLGS--SLMVSPVLEQGKSQVKA--LFPPGSWYNVFDM---TQAISSK-DGKFVTLDAPLHV-VNVHLY 780 (946)
Q Consensus 719 Qfm~G~--~LLVaPVl~~g~t~~~v--YlP~G~Wyd~~t~---~~~~~~~-gG~~~~~~apl~~-iPvfvR 780 (946)
++.|.+ ..+|+==-.....+..+ -||.|.|.|..++ .+.+... +| ..++..|-.. +-+|++
T Consensus 10 ~laF~Rg~~g~VaiN~~~~~~~~~~~t~lp~G~Y~d~l~g~~~g~~v~V~~~G-~~~~~l~~~~~v~i~~~ 79 (81)
T smart00632 10 QIAFERGSKGFVAINRSDSDLTITLQTSLPAGTYCDVISGLCTGKSVTVGSNG-IATFTLPAGGAVAIHVD 79 (81)
T ss_pred EEEEECCCeEEEEEECCCCceEEEEeecCCCcceEEEecCcccCCEEEECCCC-EEEEEECCCCeEEEEEc
Confidence 666655 45554422233334444 7899999998773 1224444 34 5566665544 666654
Done!