Citrus Sinensis ID: 002256

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940------
MCVYIYQIFQRTHSLSSFSKQAKQMTSSLCFASFLLALLLCILSANSSSTPPTKIGKGYRLISIEEVDGGILGHLQVKEKNNIYGPDIPLLQLYVKHETEDRLRVHITDAQKQRWEVPYNLLPREQPPKLKQTIGRTRKNPIAVSDYSSNGLIFSYSADPFSFAVKRKSNGETLFNTSSDESDPFGPMVFKDQYLEISTKLPKDASLYGLGENTQPHGIKLYPNDPYTLYTTDVSAINLNTDLYGSHPVYMDLRNVNGEGAAHGVLLLSSNGMDVFYKGTSLTYKIIGGVFDFYFFAGPSPLAVVDQYTAFIGRPAPMPYWSLGFHQCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDHMDGHKDFTLNPTNYPRPKLLAFLEKIHKIGMKYIVIIDPGIGVNSSYGVYQRGIANDVFIKYEGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHELVPVDGLWIDMNEASNFCSGLCKIPKGKQCPTGTGPGWVCCLDCKNITKTRWDDPPYKINASGLQVPIGFKTIATSAYHYNGVLEYDAHSIYGFSQSIATHKALLGLEGKRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQWESVAESARNALGMRYKLLPFLYTLNYEAHLSGAPIARPLFFSFPNYVECYNVSTQFLLGSSLMVSPVLEQGKSQVKALFPPGSWYNVFDMTQAISSKDGKFVTLDAPLHVVNVHLYQNTILPMQQGGLISKEARMTPFSLVVTFPAGASGVQAKGKLYLDEDELPEMKLGNGYSTYVDFFATTGNGTVKIWSEVQEGKFALSKGWIIDSVTVLGLGGSGKASTLEINGSPTNANSKIEFNASEQKHLNSVEDEQKSVMVGIKGLGFPVGKNFVMSWKMGISG
ccEEEEEEEEcccccccccccccccccHHHHHHccccEEEEEccccccccccccccccEEEEEEEEccccEEEEEEEcccccccccccccEEEEEEEEEccEEEEEEEccccccEEcccccccccccccccccccccccccccccccccccEEEEEEEcccEEEEEEcccccEEEEccccccccccccEECccEEEEEECccccccEEEcccccccccccccccccEEccccccccccccccccccccEEEEEECccccccEEEEEEcccccCEEEECccCEEEEEEcCEEEEEEECcccHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHccccccEEEcccccccccccCECccccccccHHHHHHHHHHHcccEEEEEEccccccccccccccccccccEEEcccccEEEEEEcccccccccccccHHHHHHHHHHHHHHccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccCEEEECcccHHHHHHHHHHHHHHcccccccEEEEccccccccccEEECccccccccHHHHHcHHHHHHcccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccCEEcccccccccccccccccEEEEcccEEECcccccccCEEEEEcccccEEEECcccCEEEccccEEEEECcccccccEEEEccEEEECccccccEEccccccCEEEEEccccccCEEEEEEEEECccccccccccccEEEEEEEEEEEcccEEEEEEEEEEcCECccccCEEEEEEEEECcccccEEEEEEccEEccccCEEEEcccccEEcccccccccEEEEEEEcccEEccccEEEEEEEEEcc
*CVYIYQIFQRTHSLSSFSKQAKQMTSSLCFASFLLALLLCILSANSSSTPPTKIGKGYRLISIEEVDGGILGHLQVKEKNNIYGPDIPLLQLYVKHETEDRLRVHITDAQKQRWEVPYNLLPREQP******************DYSSNGLIFSYSADPFSFAVKRKSNGETLFNTSSDESDPFGPMVFKDQYLEISTKLPKDASLYGLGENTQPHGIKLYPNDPYTLYTTDVSAINLNTDLYGSHPVYMDLRNVNGEGAAHGVLLLSSNGMDVFYKGTSLTYKIIGGVFDFYFFAGPSPLAVVDQYTAFIGRPAPMPYWSLGFHQCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDHMDGHKDFTLNPTNYPRPKLLAFLEKIHKIGMKYIVIIDPGIGVNSSYGVYQRGIANDVFIKYEGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHELVPVDGLWIDMNEASNFCSGLCKIPKGKQCPTGTGPGWVCCLDCKNITKTRWDDPPYKINASGLQVPIGFKTIATSAYHYNGVLEYDAHSIYGFSQSIATHKALLGLEGKRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQWESVAESARNALGMRYKLLPFLYTLNYEAHLSGAPIARPLFFSFPNYVECYNVSTQFLLGSSLMVSPVLEQGKSQVKALFPPGSWYNVFDMTQAISSKDGKFVTLDAPLHVVNVHLYQNTILPMQQGGLISKEARMTPFSLVVTFPAGASGVQAKGKLYLDEDELPEMKLGNGYSTYVDFFATTGNGTVKIWSEVQEGKFALSKGWIIDSVTVLGLGGSGKASTLEINGSPTNANSKIEFNASEQKHLNSVEDEQKSVMVGIKGLGFPVGKNFVMSWKMGI**
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MCVYIYQIFQRTHSLSSFSKQAKQMTSSLCFASFLLALLLCILSANSSSTPPTKIGKGYRLISIEEVDGGILGHLQVKEKNNIYGPDIPLLQLYVKHETEDRLRVHITDAQKQRWEVPYNLLPREQPPKLKQTIGRTRKNPIAVSDYSSNGLIFSYSADPFSFAVKRKSNGETLFNTSSDESDPFGPMVFKDQYLEISTKLPKDASLYGLGENTQPHGIKLYPNDPYTLYTTDVSAINLNTDLYGSHPVYMDLRNVNGEGAAHGVLLLSSNGMDVFYKGTSLTYKIIGGVFDFYFFAGPSPLAVVDQYTAFIGRPAPMPYWSLGFHQCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDHMDGHKDFTLNPTNYPRPKLLAFLEKIHKIGMKYIVIIDPGIGVNSSYGVYQRGIANDVFIKYEGEPYLAQVWPGAVNFPDFLNPKTVSWWGDEIRRFHELVPVDGLWIDMNEASNFCSGLCKIPKGKQCPTGTGPGWVCCLDCKNITKTRWDDPPYKINASGLQVPIGFKTIATSAYHYNGVLEYDAHSIYGFSQSIATHKALLGLEGKRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQWESVAESARNALGMRYKLLPFLYTLNYEAHLSGAPIARPLFFSFPNYVECYNVSTQFLLGSSLMVSPVLEQGKSQVKALFPPGSWYNVFDMTQAISSKDGKFVTLDAPLHVVNVHLYQNTILPMQQGGLISKEARMTPFSLVVTFPAGASGVQAKGKLYLDEDELPEMKLGNGYSTYVDFFATTGNGTVKIWSEVQEGKFALSKGWIIDSVTVLGLGGSGKASTLEINGSPTNANSKIEFNASEQKHLNSVEDEQKSVMVGIKGLGFPVGKNFVMSWKMGISG

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Alpha-xylosidase 1 Has alpha-xylosidase activity against xylan oligosaccharides. Also has alpha-glucosidase activity against p-nitrophenyl-alpha-D-glucopyranoside. No activity against p-nitrophenyl-D-xyloside.confidentQ9S7Y7
Probable alpha/beta-glucosidase agdC Glucosidase involved in the degradation of cellulosic biomass. Has both alpha- and beta-glucosidase activity.probableQ4WRH9
Probable alpha/beta-glucosidase agdC Glucosidase involved in the degradation of cellulosic biomass. Has both alpha- and beta-glucosidase activity.probableQ2UQV7

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
3.-.-.-Hydrolases.probable
3.2.-.-Glycosylases.probable
3.2.1.-Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2F2H, chain A
Confidence level:very confident
Coverage over the Query: 61-475,534-828,840-863
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Template: 3NSX, chain A
Confidence level:very confident
Coverage over the Query: 194-485,501-842
View the alignment between query and template
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Template: 2G3M, chain A
Confidence level:very confident
Coverage over the Query: 191-483,509-790,803-825,844-897
View the alignment between query and template
View the model in PyMOL
Template: 3TOP, chain A
Confidence level:very confident
Coverage over the Query: 57-128,144-491,509-904,916-936
View the alignment between query and template
View the model in PyMOL
Template: 3LPO, chain A
Confidence level:confident
Coverage over the Query: 58-138,156-490,506-911,925-940
View the alignment between query and template
View the model in PyMOL